RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EPG5 (Homo sapiens)

Ensembl gene IDs: ENSG00000152223

Ensembl transcript IDs: ENST00000282041.11, ENST00000585906.5, ENST00000586655.1, ENST00000587262.1, ENST00000587884.1, ENST00000587973.1, ENST00000587974.1, ENST00000590854.5, ENST00000590884.5, ENST00000592272.5

Found 1484 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGGGAAGCACGGCGCCCTCGGTGGACGCTGCCCCCTGCTGGCAGCTaGGGGCGCAGCAGCCCAGGGCTCTCAGAGTGGCCTTCCAACACT +
Preference number: 1 (lower is better)
Translates to: WEARRPRWTLPPAGS*GRSSPGLSEWPSNT
Trigger: AGTGTTGGAAGGCCACTCTGAGAGCCCTGGGCTGCTGCGCCCCCAGCTGCCAGCAGGGGGCAGCGTCCACCGAGGGCGCCGTGCTTCCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000590884.5
3UTR GCA 90 bp CCAAGGCTCATTACCCCTGCAAGCCAACAGGCGGGCTGGTCTCTCTaGCGCCCTTCTTTCCCAGGAGGCTACAGCAGCATGGCCATGTCT +
Preference number: 1 (lower is better)
Translates to: PRLITPASQQAGWSL*RPSFPGGYSSMAMS
Trigger: AGACATGGCCATGCTGCTGTAGCCTCCTGGGAAAGAAGGGCGGCAGAGAGACCAGCCCGCCTGTTGGCTTGCAGGGGTAATGAGCCTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR CCA 90 bp CAGGCTTCTGTAGTCTCAGCCATGTGGCGGACGGACGCCAGGCTCTaGCAGGCTGCTGTTAAAAGGGGCAGCACCACCAGCCCATGCATT +
Preference number: 1 (lower is better)
Translates to: QASVVSAMWRTDARL*QAAVKRGSTTSPCI
Trigger: AATGCATGGGCTGGTGGTGCTGCCCCTTTTAACAGCAGCCTGCCAGAGCCTGGCGTCCGTCCGCCACATGGCTGAGACTACAGAAGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
3UTR TCA 90 bp AAGGCGACTTCCGGCCAAACCCAATTGCCCCCAGGATCCCAGAGCTaGGTCTCTCCTCAGCCACGAGGTTCTGCCTGCTCTGAACCAAGA +
Preference number: 1 (lower is better)
Translates to: KATSGQTQLPPGSQS*VSPQPRGSACSEPR
Trigger: TCTTGGTTCAGAGCAGGCAGAACCTCGTGGCTGAGGAGAGACTCAGCTCTGGGATCCTGGGGGCAATTGGGTTTGGCCGGAAGTCGCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
3UTR GCA 90 bp CCTCCTGCTCCCAGGAAGCTGTTAGACATCTTTATTTGGTCCCGATaGCACTGTTGGCCACCCTGTGGTGAAGTCTGGAGCCTGCAGCCG +
Preference number: 1 (lower is better)
Translates to: PPAPRKLLDIFIWSR*HCWPPCGEVWSLQP
Trigger: CGGCTGCAGGCTCCAGACTTCACCACAGGGTGGCCAACAGTGGCATCGGGACCAAATAAAGATGTCTAACAGCTTCCTGGGAGCAGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR CCA 90 bp TTTTTCAAGCCAAGGCTCATTACCCCTGCAAGCCAACAGGCGGGCTaGTCTCTCTGCCGCCCTTCTTTCCCAGGAGGCTACAGCAGCATG +
Preference number: 1 (lower is better)
Translates to: FFKPRLITPASQQAG*SLCRPSFPGGYSSM
Trigger: CATGCTGCTGTAGCCTCCTGGGAAAGAAGGGCGGCAGAGAGACCAGCCCGCCTGTTGGCTTGCAGGGGTAATGAGCCTTGGCTTGAAAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR CCA 90 bp CCCAGGAAGCTGTTAGACATCTTTATTTGGTCCCGATGCCACTGTTaGCCACCCTGTGGTGAAGTCTGGAGCCTGCAGCCGTTCGCCCTC +
Preference number: 1 (lower is better)
Translates to: PRKLLDIFIWSRCHC*PPCGEVWSLQPFAL
Trigger: GAGGGCGAACGGCTGCAGGCTCCAGACTTCACCACAGGGTGGCCAACAGTGGCATCGGGACCAAATAAAGATGTCTAACAGCTTCCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR GCA 90 bp TCTTGGCACCTGCAAGCAAGCACCAACTTAAATGTATGCCCCAGGTaGCTCATTTGTCTCACCCTAGCCCTGGCCCTGCTAATCCGGGGC +
Preference number: 1 (lower is better)
Translates to: SWHLQASTNLNVCPR*LICLTLALALLIRG
Trigger: GCCCCGGATTAGCAGGGCCAGGGCTAGGGTGAGACAAATGAGGCACCTGGGGCATACATTTAAGTTGGTGCTTGCTTGCAGGTGCCAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR GCA 90 bp GAAGAGCTGCGGTTCTGGCCTGCTGTTGCAACAGATTCAGGTCTGTaGACACCAGCTGGGTGGCGTCCTTCTGACTCAATAGCACAGCAG +
Preference number: 1 (lower is better)
Translates to: EELRFWPAVATDSGL*TPAGWRPSDSIAQQ
Trigger: CTGCTGTGCTATTGAGTCAGAAGGACGCCACCCAGCTGGTGTGCACAGACCTGAATCTGTTGCAACAGCAGGCCAGAACCGCAGCTCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587884.1
3UTR GCA 90 bp CCTCGTTCCACTTTGAAGAAGGCCTCCATGAGCATCTGGTCAGGGTaGAGGTCCTTCCATGGCAGTTTCCGGTACGTGCTATGGAAAGCG +
Preference number: 1 (lower is better)
Translates to: PRSTLKKASMSIWSG*RSFHGSFRYVLWKA
Trigger: CGCTTTCCATAGCACGTACCGGAAACTGCCATGGAAGGACCTGCACCCTGACCAGATGCTCATGGAGGCCTTCTTCAAAGTGGAACGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000592272.5
3UTR CCA 90 bp ATCCTGCCTCCTCCTGCTCCCAGGAAGCTGTTAGACATCTTTATTTaGTCCCGATGCCACTGTTGGCCACCCTGTGGTGAAGTCTGGAGC +
Preference number: 1 (lower is better)
Translates to: ILPPPAPRKLLDIFI*SRCHCWPPCGEVWS
Trigger: GCTCCAGACTTCACCACAGGGTGGCCAACAGTGGCATCGGGACCAAATAAAGATGTCTAACAGCTTCCTGGGAGCAGGAGGAGGCAGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR CCA 90 bp AGTCACGCCTTGGAGCTGAGGTCCCGAGTGTGCAGGAAGGAGCTTTaGAAACATGTACAGGTGGGTCCCGAATCCACTGCTACTGTCATG +
Preference number: 1 (lower is better)
Translates to: SHALELRSRVCRKEL*KHVQVGPESTATVM
Trigger: CATGACAGTAGCAGTGGATTCGGGACCCACCTGTACATGTTTCCAAAGCTCCTTCCTGCACACTCGGGACCTCAGCTCCAAGGCGTGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR CCA 90 bp TTCCCCAACCTCAAAGAAGTGAGAGACGCAGGCACACAACCCCAGTaGGGCAGAGGCATGCGATGTCTGAGCCAACAAAGGATGGTGAGA +
Preference number: 1 (lower is better)
Translates to: FPNLKEVRDAGTQPQ*GRGMRCLSQQRMVR
Trigger: TCTCACCATCCTTTGTTGGCTCAGACATCGCATGCCTCTGCCCCACTGGGGTTGTGTGCCTGCGTCTCTCACTTCTTTGAGGTTGGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR TCA 90 bp TCTATCAAAGGGTGCAAACTTAGGTGTCGACAGGGGCAAGTGATGTaGATGAGGCTAGGGTCAGGGCCCGAGGGAATGCACAGACTCTCC +
Preference number: 1 (lower is better)
Translates to: SIKGCKLRCRQGQVM*MRLGSGPEGMHRLS
Trigger: GGAGAGTCTGTGCATTCCCTCGGGCCCTGACCCTAGCCTCATTCACATCACTTGCCCCTGTCGACACCTAAGTTTGCACCCTTTGATAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR GCA 90 bp GAAGCACTCTCTTGGCACCTGCAAGCAAGCACCAACTTAAATGTATaGCCCAGGTGCCTCATTTGTCTCACCCTAGCCCTGGCCCTGCTA +
Preference number: 1 (lower is better)
Translates to: EALSWHLQASTNLNV*PRCLICLTLALALL
Trigger: TAGCAGGGCCAGGGCTAGGGTGAGACAAATGAGGCACCTGGGGCATACATTTAAGTTGGTGCTTGCTTGCAGGTGCCAAGAGAGTGCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR CCA 90 bp CTGCCTCAAGGAGGGGCAAGTGAACAGCCCCAGCCTGAACTGCTCTaGACAGAACCACGACCAATAGGCAACGTAGAAACATCTTGGTTC +
Preference number: 1 (lower is better)
Translates to: LPQGGASEQPQPELL*TEPRPIGNVETSWF
Trigger: GAACCAAGATGTTTCTACGTTGCCTATTGGTCGTGGTTCTGTCCAGAGCAGTTCAGGCTGGGGCTGTTCACTTGCCCCTCCTTGAGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR TCA 90 bp ATCCCAGAGCTGAGTCTCTCCTCAGCCACGAGGTTCTGCCTGCTCTaGACCAAGAGCAGAATTCGAATGACAGATTCTGTCAGGACGGAG +
Preference number: 1 (lower is better)
Translates to: IPELSLSSATRFCLL*TKSRIRMTDSVRTE
Trigger: CTCCGTCCTGACAGAATCTGTCATTCGAATTCTGCTCTTGGTTCAGAGCAGGCAGAACCTCGTGGCTGAGGAGAGACTCAGCTCTGGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
3UTR TCA 90 bp TGCAACAGATTCAGGTCTGTGCACACCAGCTGGGTGGCGTCCTTCTaGCTCAATAGCACAGCAGAGGAAATAACTGGCACAGGAGGCTTC +
Preference number: 1 (lower is better)
Translates to: CNRFRSVHTSWVASF*LNSTAEEITGTGGF
Trigger: GAAGCCTCCTGTGCCAGTTATTTCCTCTGCTGTGCTATTGAGTCAGAAGGACGCCACCCAGCTGGTGTGCACAGACCTGAATCTGTTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587884.1
3UTR TCA 90 bp TGCTTTGGCATTGTGTCTAACAGCTCACCATCCAGAGCAACCTGCTaGGATTCCCGAAGAGCTGCGGTTCTGGCCTGCTGTTGCAACAGA +
Preference number: 1 (lower is better)
Translates to: CFGIVSNSSPSRATC*DSRRAAVLACCCNR
Trigger: TCTGTTGCAACAGCAGGCCAGAACCGCAGCTCTTCGGGAATCTCAGCAGGTTGCTCTGGATGGTGAGCTGTTAGACACAATGCCAAAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587884.1
3UTR GCA 90 bp TTCACTTGTTCTATTAATAGGCAGTGGGACAACATGATTCCGGGATaGAGCCTGCCTCTGCAACCCACCTGTGCACTGCAGCATGGGGAG +
Preference number: 1 (lower is better)
Translates to: FTCSINRQWDNMIPG*SLPLQPTCALQHGE
Trigger: CTCCCCATGCTGCAGTGCACAGGTGGGTTGCAGAGGCAGGCTGCATCCCGGAATCATGTTGTCCCACTGCCTATTAATAGAACAAGTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR CCA 90 bp GAAGAAGGCCTCCATGAGCATCTGGTCAGGGTGCAGGTCCTTCCATaGCAGTTTCCGGTACGTGCTATGGAAAGCGTACAGAATGAACTC +
Preference number: 1 (lower is better)
Translates to: EEGLHEHLVRVQVLP*QFPVRAMESVQNEL
Trigger: GAGTTCATTCTGTACGCTTTCCATAGCACGTACCGGAAACTGCCATGGAAGGACCTGCACCCTGACCAGATGCTCATGGAGGCCTTCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000592272.5
3UTR GCA 90 bp GAGGGAATGCACAGACTCTCCCGACTAGAGAGAGGCAGCCCTGTCTaGACTCCTCACCAAGTGGACCAAACAAAACATCTGTGCAAAACA +
Preference number: 1 (lower is better)
Translates to: EGMHRLSRLERGSPV*TPHQVDQTKHLCKT
Trigger: TGTTTTGCACAGATGTTTTGTTTGGTCCACTTGGTGAGGAGTGCAGACAGGGCTGCCTCTCTCTAGTCGGGAGAGTCTGTGCATTCCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR CCA 90 bp GTGTGTTCCAGCATTCTGCCCTTCACTTGTTCTATTAATAGGCAGTaGGACAACATGATTCCGGGATGCAGCCTGCCTCTGCAACCCACC +
Preference number: 1 (lower is better)
Translates to: VCSSILPFTCSINRQ*DNMIPGCSLPLQPT
Trigger: GGTGGGTTGCAGAGGCAGGCTGCATCCCGGAATCATGTTGTCCCACTGCCTATTAATAGAACAAGTGAAGGGCAGAATGCTGGAACACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR GCA 90 bp AGTGGACCAAACAAAACATCTGTGCAAAACATGCTCCTCCCAGACTaGCAGCTTGCCATCCTGATTCAGACAGGCAGCTTCTCCATGAGG +
Preference number: 1 (lower is better)
Translates to: SGPNKTSVQNMLLPD*QLAILIQTGSFSMR
Trigger: CCTCATGGAGAAGCTGCCTGTCTGAATCAGGATGGCAAGCTGGCAGTCTGGGAGGAGCATGTTTTGCACAGATGTTTTGTTTGGTCCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR GCA 90 bp CTTAAAACCCTTTCTTTAGCCAGCAAAGGATCAGTGAAGTCCAGCTaGACGGACAAACTGCAGGGTGTGGAATGGGACTCAAGCTTGGCC +
Preference number: 1 (lower is better)
Translates to: LKTLSLASKGSVKSS*TDKLQGVEWDSSLA
Trigger: GGCCAAGCTTGAGTCCCATTCCACACCCTGCAGTTTGTCCGTGCAGCTGGACTTCACTGATCCTTTGCTGGCTAAAGAAAGGGTTTTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587884.1
3UTR GCA 90 bp TGGCATCAAAATATCCTCATCTGGTTCAAGGCCCCAGGCAGTAAGTaGCAAGTGAATGGACTCCAGAAGCCTGGTACGATCAGACAGAGG +
Preference number: 1 (lower is better)
Translates to: WHQNILIWFKAPGSK*QVNGLQKPGTIRQR
Trigger: CCTCTGTCTGATCGTACCAGGCTTCTGGAGTCCATTCACTTGGCACTTACTGCCTGGGGCCTTGAACCAGATGAGGATATTTTGATGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587884.1
3UTR CCA 90 bp TCAGGAACCTACCAGAGTGAAGGAAACCTCAAATACAGCTACTCCTaGACACTGATGCCCGAGGCATGCTGTGGAAACCGGACCAAAATG +
Preference number: 1 (lower is better)
Translates to: SGTYQSEGNLKYSYS*TLMPEACCGNRTKM
Trigger: CATTTTGGTCCGGTTTCCACAGCATGCCTCGGGCATCAGTGTCCAGGAGTAGCTGTATTTGAGGTTTCCTTCACTCTGGTAGGTTCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR CCA 90 bp ATCATCATGAAAAGGAGGCAGACAATCATGCTGCGGGTTTCTGGGTaGGGACTGGAATTCCAGGCATCAGAGAGCACACTAACCCAGTTG +
Preference number: 1 (lower is better)
Translates to: IIMKRRQTIMLRVSG*GLEFQASESTLTQL
Trigger: CAACTGGGTTAGTGTGCTCTCTGATGCCTGGAATTCCAGTCCCCACCCAGAAACCCGCAGCATGATTGTCTGCCTCCTTTTCATGATGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
3UTR CCA 90 bp TGGTCAGGGTGCAGGTCCTTCCATGGCAGTTTCCGGTACGTGCTATaGAAAGCGTACAGAATGAACTCTGGCATTTTGGGTGCTGTACAT +
Preference number: 1 (lower is better)
Translates to: WSGCRSFHGSFRYVL*KAYRMNSGILGAVH
Trigger: ATGTACAGCACCCAAAATGCCAGAGTTCATTCTGTACGCTTTCCATAGCACGTACCGGAAACTGCCATGGAAGGACCTGCACCCTGACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000592272.5
3UTR TCA 90 bp AGAAGTGGAAACATACAAAGAACTCCATCTGGAGGTCTTGTGAGATaGCTGGGACATTCGGCAACTGTGAGTGGCTCTGCACCCAAGTGG +
Preference number: 1 (lower is better)
Translates to: RSGNIQRTPSGGLVR*LGHSATVSGSAPKW
Trigger: CCACTTGGGTGCAGAGCCACTCACAGTTGCCGAATGTCCCAGTCATCTCACAAGACCTCCAGATGGAGTTCTTTGTATGTTTCCACTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR GCA 90 bp AAACAAAACATCTGTGCAAAACATGCTCCTCCCAGACTGCCAGCTTaGCATCCTGATTCAGACAGGCAGCTTCTCCATGAGGATACACGG +
Preference number: 1 (lower is better)
Translates to: KQNICAKHAPPRLPA*HPDSDRQLLHEDTR
Trigger: CCGTGTATCCTCATGGAGAAGCTGCCTGTCTGAATCAGGATGGCAAGCTGGCAGTCTGGGAGGAGCATGTTTTGCACAGATGTTTTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR GCA 90 bp AGGGAGAGAGATGTTTTTCATGGCAACCAGAATCCTGCCTCCTCCTaGTCCCAGGAAGCTGTTAGACATCTTTATTTGGTCCCGATGCCA +
Preference number: 1 (lower is better)
Translates to: RERDVFHGNQNPASS*SQEAVRHLYLVPMP
Trigger: TGGCATCGGGACCAAATAAAGATGTCTAACAGCTTCCTGGGAGCAGGAGGAGGCAGGATTCTGGTTGCCATGAAAAACATCTCTCTCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR CCA 90 bp CCTCAGTCTCTGTCTCCTGACACTGAGCCTTTCAGATATCGAACATaGTGTCTATCAAAGGGTGCAAACTTAGGTGTCGACAGGGGCAAG +
Preference number: 1 (lower is better)
Translates to: PQSLSPDTEPFRYRT*CLSKGANLGVDRGK
Trigger: CTTGCCCCTGTCGACACCTAAGTTTGCACCCTTTGATAGACACCATGTTCGATATCTGAAAGGCTCAGTGTCAGGAGACAGAGACTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR CCA 90 bp TTGGCCAATCCAGGTCCGGATACTGCCCCGAAGGAACTCTGCTGTTaGAATAGTCGCGTTGTTCATCATCATCAGGACTTCCATAAAGAG +
Preference number: 1 (lower is better)
Translates to: LANPGPDTAPKELCC*NSRVVHHHQDFHKE
Trigger: CTCTTTATGGAAGTCCTGATGATGATGAACAACGCGACTATTCCAACAGCAGAGTTCCTTCGGGGCAGTATCCGGACCTGGATTGGCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
3UTR TCA 90 bp AAAATATCCTCATCTGGTTCAAGGCCCCAGGCAGTAAGTGCCAAGTaGATGGACTCCAGAAGCCTGGTACGATCAGACAGAGGAGGTTTA +
Preference number: 1 (lower is better)
Translates to: KISSSGSRPQAVSAK*MDSRSLVRSDRGGL
Trigger: TAAACCTCCTCTGTCTGATCGTACCAGGCTTCTGGAGTCCATTCACTTGGCACTTACTGCCTGGGGCCTTGAACCAGATGAGGATATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587884.1
3UTR GCA 90 bp GGAAACCTCAAATACAGCTACTCCTGGACACTGATGCCCGAGGCATaGTGTGGAAACCGGACCAAAATGAAGTCTGCGTTAGTAAGTCTA +
Preference number: 1 (lower is better)
Translates to: GNLKYSYSWTLMPEA*CGNRTKMKSALVSL
Trigger: TAGACTTACTAACGCAGACTTCATTTTGGTCCGGTTTCCACAGCATGCCTCGGGCATCAGTGTCCAGGAGTAGCTGTATTTGAGGTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR TCA 90 bp AAGATGTGGGGTGAGATCTGTCTTGGGCAACAACTGATATTAAGCTaGGGTCTGCAGTCTCAACTTGCCACTAGCTTAATGTGCCTCCCA +
Preference number: 1 (lower is better)
Translates to: KMWGEICLGQQLILS*GLQSQLATSLMCLP
Trigger: TGGGAGGCACATTAAGCTAGTGGCAAGTTGAGACTGCAGACCTCAGCTTAATATCAGTTGTTGCCCAAGACAGATCTCACCCCACATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR GCA 90 bp CTGCACTCCAAATGTAGTGTGGTCTGTTCTTCACGATTCACATACTaGTTTGGCATTGTGTCTAACAGCTCACCATCCAGAGCAACCTGC +
Preference number: 1 (lower is better)
Translates to: LHSKCSVVCSSRFTY*FGIVSNSSPSRATC
Trigger: GCAGGTTGCTCTGGATGGTGAGCTGTTAGACACAATGCCAAAGCAGTATGTGAATCGTGAAGAACAGACCACACTACATTTGGAGTGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587884.1
3UTR GCA 90 bp TCTTTAAAACTCTCATGCAGTGAGTCAATACAGTCAGTGAACAGCTaGACAATGCTTGAGGCCACCACAGTATCACTCTCTAGCCAGGGG +
Preference number: 1 (lower is better)
Translates to: SLKLSCSESIQSVNS*TMLEATTVSLSSQG
Trigger: CCCCTGGCTAGAGAGTGATACTGTGGTGGCCTCAAGCATTGTGCAGCTGTTCACTGACTGTATTGACTCACTGCATGAGAGTTTTAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587884.1
3UTR CCA 90 bp ATCTGGAGGTCTTGTGAGATGACTGGGACATTCGGCAACTGTGAGTaGCTCTGCACCCAAGTGGAACTTAGTAAGTTTCTCTTGTGGATA +
Preference number: 1 (lower is better)
Translates to: IWRSCEMTGTFGNCE*LCTQVELSKFLLWI
Trigger: TATCCACAAGAGAAACTTACTAAGTTCCACTTGGGTGCAGAGCCACTCACAGTTGCCGAATGTCCCAGTCATCTCACAAGACCTCCAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR CCA 90 bp GCCATCCTGATTCAGACAGGCAGCTTCTCCATGAGGATACACGGCTaGATGGAAATTGACTTGTCATCATCTCTACTGCCCACTATAATC +
Preference number: 1 (lower is better)
Translates to: AILIQTGSFSMRIHG*MEIDLSSSLLPTII
Trigger: GATTATAGTGGGCAGTAGAGATGATGACAAGTCAATTTCCATCCAGCCGTGTATCCTCATGGAGAAGCTGCCTGTCTGAATCAGGATGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR TCA 90 bp TCAGACAGGCAGCTTCTCCATGAGGATACACGGCTGGATGGAAATTaGCTTGTCATCATCTCTACTGCCCACTATAATCACGATCAAGTG +
Preference number: 1 (lower is better)
Translates to: SDRQLLHEDTRLDGN*LVIISTAHYNHDQV
Trigger: CACTTGATCGTGATTATAGTGGGCAGTAGAGATGATGACAAGTCAATTTCCATCCAGCCGTGTATCCTCATGGAGAAGCTGCCTGTCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR TCA 90 bp CTGTTTGGTCTACCAGTTGAACTTCCTTTGCCAATAAAATCATCATaGAAAGGAGGCAGACAATCATGCTGCGGGTTTCTGGGTGGGGAC +
Preference number: 1 (lower is better)
Translates to: LFGLPVELPLPIKSS*KGGRQSCCGFLGGD
Trigger: GTCCCCACCCAGAAACCCGCAGCATGATTGTCTGCCTCCTTTTCATGATGATTTTATTGGCAAAGGAAGTTCAACTGGTAGACCAAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
3UTR TCA 90 bp CCTCCACGGAGCTTGGGTACACCTGTTCCAGCCACTTGCTTAAGATaGGCAGCACTTTCATTTCATTCCTTAAAGTCTGTTCGCTGTTTA +
Preference number: 1 (lower is better)
Translates to: PPRSLGTPVPATCLR*AALSFHSLKSVRCL
Trigger: TAAACAGCGAACAGACTTTAAGGAATGAAATGAAAGTGCTGCTCATCTTAAGCAAGTGGCTGGAACAGGTGTACCCAAGCTCCGTGGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
3UTR TCA 90 bp CCTTCCATGGCAGTTTCCGGTACGTGCTATGGAAAGCGTACAGAATaGACTCTGGCATTTTGGGTGCTGTACATGCTTCACAATAATGCA +
Preference number: 1 (lower is better)
Translates to: PSMAVSGTCYGKRTE*TLAFWVLYMLHNNA
Trigger: TGCATTATTGTGAAGCATGTACAGCACCCAAAATGCCAGAGTTCATTCTGTACGCTTTCCATAGCACGTACCGGAAACTGCCATGGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000592272.5
3UTR GCA 90 bp ATGGAAAGCGTACAGAATGAACTCTGGCATTTTGGGTGCTGTACATaGTTCACAATAATGCATCAGGTGCAACCAAAGGGCTCCTGCATC +
Preference number: 1 (lower is better)
Translates to: MESVQNELWHFGCCT*FTIMHQVQPKGSCI
Trigger: GATGCAGGAGCCCTTTGGTTGCACCTGATGCATTATTGTGAAGCATGTACAGCACCCAAAATGCCAGAGTTCATTCTGTACGCTTTCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000592272.5
3UTR GCA 90 bp GTACGTGCTATGGAAAGCGTACAGAATGAACTCTGGCATTTTGGGTaGTGTACATGCTTCACAATAATGCATCAGGTGCAACCAAAGGGC +
Preference number: 1 (lower is better)
Translates to: VRAMESVQNELWHFG*CTCFTIMHQVQPKG
Trigger: GCCCTTTGGTTGCACCTGATGCATTATTGTGAAGCATGTACAGCACCCAAAATGCCAGAGTTCATTCTGTACGCTTTCCATAGCACGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000592272.5
3UTR CCA 90 bp CTTGGCATTTCTTACCGCTGCTGCCTCTGCACTCCAAATGTAGTGTaGTCTGTTCTTCACGATTCACATACTGCTTTGGCATTGTGTCTA +
Preference number: 1 (lower is better)
Translates to: LGISYRCCLCTPNVV*SVLHDSHTALALCL
Trigger: TAGACACAATGCCAAAGCAGTATGTGAATCGTGAAGAACAGACCACACTACATTTGGAGTGCAGAGGCAGCAGCGGTAAGAAATGCCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587884.1
3UTR CCA 90 bp TGGCAGTTTCCGGTACGTGCTATGGAAAGCGTACAGAATGAACTCTaGCATTTTGGGTGCTGTACATGCTTCACAATAATGCATCAGGTG +
Preference number: 1 (lower is better)
Translates to: WQFPVRAMESVQNEL*HFGCCTCFTIMHQV
Trigger: CACCTGATGCATTATTGTGAAGCATGTACAGCACCCAAAATGCCAGAGTTCATTCTGTACGCTTTCCATAGCACGTACCGGAAACTGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000592272.5
3UTR GCA 90 bp AGGTCTTGTGAGATGACTGGGACATTCGGCAACTGTGAGTGGCTCTaGACCCAAGTGGAACTTAGTAAGTTTCTCTTGTGGATAAATATA +
Preference number: 1 (lower is better)
Translates to: RSCEMTGTFGNCEWL*TQVELSKFLLWINI
Trigger: TATATTTATCCACAAGAGAAACTTACTAAGTTCCACTTGGGTGCAGAGCCACTCACAGTTGCCGAATGTCCCAGTCATCTCACAAGACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR GCA 90 bp TCAGGCTACAGACTACCCATACACAAAGACATATTAAGCCAGCTATaGAGGCAAAATCCATCTAGAGCTGATAGAATGAGGAACGTGGGA +
Preference number: 1 (lower is better)
Translates to: SGYRLPIHKDILSQL*RQNPSRADRMRNVG
Trigger: TCCCACGTTCCTCATTCTATCAGCTCTAGATGGATTTTGCCTGCATAGCTGGCTTAATATGTCTTTGTGTATGGGTAGTCTGTAGCCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR CCA 90 bp TACATAAAACAGAGACAGAAGTGGAAACATACAAAGAACTCCATCTaGAGGTCTTGTGAGATGACTGGGACATTCGGCAACTGTGAGTGG +
Preference number: 1 (lower is better)
Translates to: YIKQRQKWKHTKNSI*RSCEMTGTFGNCEW
Trigger: CCACTCACAGTTGCCGAATGTCCCAGTCATCTCACAAGACCTCCAGATGGAGTTCTTTGTATGTTTCCACTTCTGTCTCTGTTTTATGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR TCA 90 bp ATGATCAGCTACTATCTCAAAATGAGCTGTACAGTTGGCCCAAAATaGAGAGCAGGCAGTAGTAGAGGATTAAGGGCAAAGTGCCTTGTT +
Preference number: 1 (lower is better)
Translates to: MISYYLKMSCTVGPK*RAGSSRGLRAKCLV
Trigger: AACAAGGCACTTTGCCCTTAATCCTCTACTACTGCCTGCTCTTCATTTTGGGCCAACTGTACAGCTCATTTTGAGATAGTAGCTGATCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR TCA 90 bp CACCTTTCGTTGTCCTCTAAAACCAGGATCCATGGCTTAAAGAGCTaGATGATTACTGAATGTAGGGATTTCAGCACTGTTTTCCTGCTG +
Preference number: 1 (lower is better)
Translates to: HLSLSSKTRIHGLKS*MITECRDFSTVFLL
Trigger: CAGCAGGAAAACAGTGCTGAAATCCCTACATTCAGTAATCATTCAGCTCTTTAAGCCATGGATCCTGGTTTTAGAGGACAACGAAAGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590884.5
3UTR TCA 90 bp TTAGCAGCTTCTGCTTGCAACTGCTTCACTTCCTTCCGTAAAACATaGAGCTGTTGGCTTATGGCTTCATTCTTATGCATGCCTTCAAAC +
Preference number: 1 (lower is better)
Translates to: LAASACNCFTSFRKT*SCWLMASFLCMPSN
Trigger: GTTTGAAGGCATGCATAAGAATGAAGCCATAAGCCAACAGCTTCATGTTTTACGGAAGGAAGTGAAGCAGTTGCAAGCAGAAGCTGCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587884.1
3UTR TCA 90 bp CGTGATCAAGTTTTCTGCATGTACAGCAGCTTCCACAATATTAAGTaGTGGTGGTTTAGCAGCTTCTGCTTGCAACTGCTTCACTTCCTT +
Preference number: 1 (lower is better)
Translates to: RDQVFCMYSSFHNIK*WWFSSFCLQLLHFL
Trigger: AAGGAAGTGAAGCAGTTGCAAGCAGAAGCTGCTAAACCACCATCACTTAATATTGTGGAAGCTGCTGTACATGCAGAAAACTTGATCACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587884.1
3UTR TCA 90 bp CTGCTTTCGTTGTCCTCTAAAACCAGGATCCATGGCTTAAAGAGCTaGATGATTACTGAATGTAGGGATTTCAGCACTGTTTTCCTGCTG +
Preference number: 1 (lower is better)
Translates to: LLSLSSKTRIHGLKS*MITECRDFSTVFLL
Trigger: CAGCAGGAAAACAGTGCTGAAATCCCTACATTCAGTAATCATTCAGCTCTTTAAGCCATGGATCCTGGTTTTAGAGGACAACGAAAGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587884.1
3UTR GCA 90 bp ATGAAAATCATATCACTGTTGTCCTCACTTAGAAACTTCACCACTTaGTCATACAGCTGTATGAACTCTGCAGGTGCAGCATTGGGAGTG +
Preference number: 1 (lower is better)
Translates to: MKIISLLSSLRNFTT*SYSCMNSAGAALGV
Trigger: CACTCCCAATGCTGCACCTGCAGAGTTCATACAGCTGTATGAGCAAGTGGTGAAGTTTCTAAGTGAGGACAACAGTGATATGATTTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587884.1
3UTR-3UTR CCA 90 bp CAACACTCGGGGCTCAGAAGCTGCTCCGCGGAGCTTTGCATAAGCAGCCTGAGAGCCATGTGGCGGGTCTaGCTGTCCATGTCGGGCGGG +
Preference number: 2 (lower is better)
Translates to: QHSGLRSCSAELCISSLRAMWRV*LSMSGG
Trigger: CCCGCCCGACATGGACAGCCAGACCCGCCACATGGC...TCTCAGGCTGCTTATGCAAAGCTCCGCGGAGCAGCTTCTGAGCCCCGAGTGTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000590884.5
3UTR CAA 90 bp GAGCCTGCAGCCGTTCGCCCTCCACGCTGCTCAGTCCACAGGGCCTaGGTCTTGCTTGATTCCCGTCTTGATGTGCGGCACCCATCACTG +
Preference number: 2 (lower is better)
Translates to: EPAAVRPPRCSVHRA*VLLDSRLDVRHPSL
Trigger: CAGTGATGGGTGCCGCACATCAAGACGGGAATCAAGCAAGACCAAGGCCCTGTGGACTGAGCAGCGTGGAGGGCGAACGGCTGCAGGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR-3UTR GCA 90 bp CAGCCTAGGCCTGCCCATCACAGGCTGGACCACCAGGCACTGGACAGGGGCAGAGAAACCACAGCCCCGTaGTCTCTGGAGGCCAACAAT +
Preference number: 2 (lower is better)
Translates to: QPRPAHHRLDHQALDRGRETTAP*SLEANN
Trigger: ATTGTTGGCCTCCAGAGAGCACGGGGCTGTGGTTTC...TCTGCCCCTGTCCAGTGCCTGGTGGTCCAGCCTGTGATGGGCAGGCCTAGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR-3UTR TCA 90 bp CAGCCTAGGCCTGCCCATCACAGGCTGGACCACCAGGCACTGGACAGGGGCAGACATCTGGAGGTCTTGTaGGATGACTGGGACATTCGG +
Preference number: 2 (lower is better)
Translates to: QPRPAHHRLDHQALDRGRHLEVL*DDWDIR
Trigger: CCGAATGTCCCAGTCATCTCACAAGACCTCCAGATG...TCTGCCCCTGTCCAGTGCCTGGTGGTCCAGCCTGTGATGGGCAGGCCTAGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR-3UTR GCA 90 bp CAGCCTAGGCCTGCCCATCACAGGCTGGACCACCAGGCACTGGACAGGGGCAGAATGCTCCTCCCAGACTaGCAGCTTGCCATCCTGATT +
Preference number: 2 (lower is better)
Translates to: QPRPAHHRLDHQALDRGRMLLPD*QLAILI
Trigger: AATCAGGATGGCAAGCTGGCAGTCTGGGAGGAGCAT...TCTGCCCCTGTCCAGTGCCTGGTGGTCCAGCCTGTGATGGGCAGGCCTAGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR-3UTR CCA 90 bp CAACACTCGGGGCTCAGAAGCTGCTCCGCGGAGCTTTGCATAAGCAGCCTGAGACCAGGGCTCTCAGAGTaGCCTTCCAACACTCGGGGC +
Preference number: 2 (lower is better)
Translates to: QHSGLRSCSAELCISSLRPGLSE*PSNTRG
Trigger: GCCCCGAGTGTTGGAAGGCCACTCTGAGAGCCCTGG...TCTCAGGCTGCTTATGCAAAGCTCCGCGGAGCAGCTTCTGAGCCCCGAGTGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000590884.5
3UTR CAA 90 bp GCAGCCGTTCGCCCTCCACGCTGCTCAGTCCACAGGGCCTTGGTCTaGCTTGATTCCCGTCTTGATGTGCGGCACCCATCACTGATTCTG +
Preference number: 2 (lower is better)
Translates to: AAVRPPRCSVHRALV*LDSRLDVRHPSLIL
Trigger: CAGAATCAGTGATGGGTGCCGCACATCAAGACGGGAATCAAGCAAGACCAAGGCCCTGTGGACTGAGCAGCGTGGAGGGCGAACGGCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR-3UTR CCA 90 bp AGACAATCATGCTGCGGGTTTCTGGGTGGGGACTGGAATTCCAGGCATCAGAGAGCCATGTGGCGGGTCTaGCTGTCCATGTCGGGCGGG +
Preference number: 2 (lower is better)
Translates to: RQSCCGFLGGDWNSRHQRAMWRV*LSMSGG
Trigger: CCCGCCCGACATGGACAGCCAGACCCGCCACATGGC...TCTCTGATGCCTGGAATTCCAGTCCCCACCCAGAAACCCGCAGCATGATTGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
3UTR-3UTR TCA 90 bp GGGGCAAGTGATGTGAATGAGGCTAGGGTCAGGGCCCGAGGGAATGCACAGACTCAGGCAGCTTCTCCATaGGGATACACGGCTGGATGG +
Preference number: 2 (lower is better)
Translates to: GASDVNEARVRARGNAQTQAASP*GYTAGW
Trigger: CCATCCAGCCGTGTATCCTCATGGAGAAGCTGCCTG...AGTCTGTGCATTCCCTCGGGCCCTGACCCTAGCCTCATTCACATCACTTGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR-3UTR GCA 90 bp AGCAGCCCAGGGCTCTCAGAGTGGCCTTCCAACACTCGGGGCTCAGAAGCTGCTTGCTCCGCGGAGCTTTaGATAAGCAGCCTGAGAATG +
Preference number: 2 (lower is better)
Translates to: SSPGLSEWPSNTRGSEAACSAEL*ISSLRM
Trigger: CATTCTCAGGCTGCTTATGCAAAGCTCCGCGGAGCA...AGCAGCTTCTGAGCCCCGAGTGTTGGAAGGCCACTCTGAGAGCCCTGGGCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000590884.5
3UTR-3UTR GCA 90 bp AATGACAGATTCTGTCAGGACGGAGTCATTCTGCTCTGTCTGAATGAGGGAGAGGCCCTCGGTGGACGCTaGCCCCTGCTGGCAGCTGGG +
Preference number: 2 (lower is better)
Translates to: NDRFCQDGVILLCLNEGEALGGR*PLLAAG
Trigger: CCCAGCTGCCAGCAGGGGGCAGCGTCCACCGAGGGC...CTCTCCCTCATTCAGACAGAGCAGAATGACTCCGTCCTGACAGAATCTGTCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000590884.5
3UTR-3UTR GCA 90 bp GACTTCCGGCCAAACCCAATTGCCCCCAGGATCCCAGAGCTGAGTCTCTCCTCAGGCAGACAATCATGCTaGGGGTTTCTGGGTGGGGAC +
Preference number: 2 (lower is better)
Translates to: DFRPNPIAPRIPELSLSSGRQSC*GFLGGD
Trigger: GTCCCCACCCAGAAACCCGCAGCATGATTGTCTGCC...TGAGGAGAGACTCAGCTCTGGGATCCTGGGGGCAATTGGGTTTGGCCGGAAGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
3UTR-3UTR GCA 90 bp CAACACTCGGGGCTCAGAAGCTGCTCCGCGGAGCTTTGCATAAGCAGCCTGAGATCCAGGTCCGGATACTaGCCCGAAGGAACTCTGCTG +
Preference number: 2 (lower is better)
Translates to: QHSGLRSCSAELCISSLRSRSGY*PEGTLL
Trigger: CAGCAGAGTTCCTTCGGGGCAGTATCCGGACCTGGA...TCTCAGGCTGCTTATGCAAAGCTCCGCGGAGCAGCTTCTGAGCCCCGAGTGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000590884.5
3UTR-3UTR GCA 90 bp GACTTCCGGCCAAACCCAATTGCCCCCAGGATCCCAGAGCTGAGTCTCTCCTCATCCAGGTCCGGATACTaGCCCGAAGGAACTCTGCTG +
Preference number: 2 (lower is better)
Translates to: DFRPNPIAPRIPELSLSSSRSGY*PEGTLL
Trigger: CAGCAGAGTTCCTTCGGGGCAGTATCCGGACCTGGA...TGAGGAGAGACTCAGCTCTGGGATCCTGGGGGCAATTGGGTTTGGCCGGAAGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
3UTR-3UTR CCA 90 bp CTCCGCGGAGCTTTGCATAAGCAGCCTGAGAATGTCACTGTACTGGTCAGGAAAGCCATGTGGCGGGTCTaGCTGTCCATGTCGGGCGGG +
Preference number: 2 (lower is better)
Translates to: LRGALHKQPENVTVLVRKAMWRV*LSMSGG
Trigger: CCCGCCCGACATGGACAGCCAGACCCGCCACATGGC...TTTCCTGACCAGTACAGTGACATTCTCAGGCTGCTTATGCAAAGCTCCGCGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000590884.5
3UTR-3UTR TCA 90 bp GTCCCGAGTGTGCAGGAAGGAGCTTTGGAAACATGTACAGGTGGGTCCCGAATCGGCAGTGGGACAACATaGTTCCGGGATGCAGCCTGC +
Preference number: 2 (lower is better)
Translates to: VPSVQEGALETCTGGSRIGSGTT*FRDAAC
Trigger: GCAGGCTGCATCCCGGAATCATGTTGTCCCACTGCC...GATTCGGGACCCACCTGTACATGTTTCCAAAGCTCCTTCCTGCACACTCGGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR-3UTR TCA 90 bp GCGGGTTTCTGGGTGGGGACTGGAATTCCAGGCATCAGAGAGCACACTAACCCATCCAGAGCAACCTGCTaGGATTCCCGAAGAGCTGCG +
Preference number: 2 (lower is better)
Translates to: AGFWVGTGIPGIREHTNPSRATC*DSRRAA
Trigger: CGCAGCTCTTCGGGAATCTCAGCAGGTTGCTCTGGA...TGGGTTAGTGTGCTCTCTGATGCCTGGAATTCCAGTCCCCACCCAGAAACCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587884.1
3UTR-3UTR GCA 90 bp GGTCCCGAGTGTGCAGGAAGGAGCTTTGGAAACATGTACAGGTGGGTCCCGAATGATGCAGCCTGCCTCTaGAACCCACCTGTGCACTGC +
Preference number: 2 (lower is better)
Translates to: GPECAGRSFGNMYRWVPNDAACL*NPPVHC
Trigger: GCAGTGCACAGGTGGGTTGCAGAGGCAGGCTGCATC...ATTCGGGACCCACCTGTACATGTTTCCAAAGCTCCTTCCTGCACACTCGGGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR-3UTR GCA 90 bp CTCCATGAGCATCTGGTCAGGGTGCAGGTCCTTCCATGGCAGTTTCCGGTACGTTCGGGGCTCAGAAGCTaGTCCGCGGAGCTTTGCATA +
Preference number: 2 (lower is better)
Translates to: LHEHLVRVQVLPWQFPVRSGLRS*SAELCI
Trigger: TATGCAAAGCTCCGCGGAGCAGCTTCTGAGCCCCGA...ACGTACCGGAAACTGCCATGGAAGGACCTGCACCCTGACCAGATGCTCATGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587884.1
3UTR-3UTR GCA 90 bp CAACACTCGGGGCTCAGAAGCTGCTCCGCGGAGCTTTGCATAAGCAGCCTGAGAGCTGCACGGACAAACTaGAGGGTGTGGAATGGGACT +
Preference number: 2 (lower is better)
Translates to: QHSGLRSCSAELCISSLRAARTN*RVWNGT
Trigger: AGTCCCATTCCACACCCTGCAGTTTGTCCGTGCAGC...TCTCAGGCTGCTTATGCAAAGCTCCGCGGAGCAGCTTCTGAGCCCCGAGTGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587884.1
3UTR-3UTR GCA 90 bp GACTTCCGGCCAAACCCAATTGCCCCCAGGATCCCAGAGCTGAGTCTCTCCTCAGCCCCAGGCAGTAAGTaGCAAGTGAATGGACTCCAG +
Preference number: 2 (lower is better)
Translates to: DFRPNPIAPRIPELSLSSAPGSK*QVNGLQ
Trigger: CTGGAGTCCATTCACTTGGCACTTACTGCCTGGGGC...TGAGGAGAGACTCAGCTCTGGGATCCTGGGGGCAATTGGGTTTGGCCGGAAGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587884.1
3UTR-3UTR CCA 90 bp CAGCCTAGGCCTGCCCATCACAGGCTGGACCACCAGGCACTGGACAGGGGCAGAGGCTCTGCACCCAAGTaGAACTTAGTAAGTTTCTCT +
Preference number: 2 (lower is better)
Translates to: QPRPAHHRLDHQALDRGRGSAPK*NLVSFS
Trigger: AGAGAAACTTACTAAGTTCCACTTGGGTGCAGAGCC...TCTGCCCCTGTCCAGTGCCTGGTGGTCCAGCCTGTGATGGGCAGGCCTAGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR-3UTR CCA 90 bp GGAGGCAGACAATCATGCTGCGGGTTTCTGGGTGGGGACTGGAATTCCAGGCATACGGACGCCAGGCTCTaGCAGGCTGCTGTTAAAAGG +
Preference number: 2 (lower is better)
Translates to: GGRQSCCGFLGGDWNSRHTDARL*QAAVKR
Trigger: CCTTTTAACAGCAGCCTGCCAGAGCCTGGCGTCCGT...ATGCCTGGAATTCCAGTCCCCACCCAGAAACCCGCAGCATGATTGTCTGCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
3UTR-3UTR CCA 90 bp GACTTCCGGCCAAACCCAATTGCCCCCAGGATCCCAGAGCTGAGTCTCTCCTCATTCCTCCACGGAGCTTaGGTACACCTGTTCCAGCCA +
Preference number: 2 (lower is better)
Translates to: DFRPNPIAPRIPELSLSSFLHGA*VHLFQP
Trigger: TGGCTGGAACAGGTGTACCCAAGCTCCGTGGAGGAA...TGAGGAGAGACTCAGCTCTGGGATCCTGGGGGCAATTGGGTTTGGCCGGAAGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
3UTR-3UTR GCA 90 bp GTCCCGAGTGTGCAGGAAGGAGCTTTGGAAACATGTACAGGTGGGTCCCGAATCAAGGCTCATTACCCCTaGAAGCCAACAGGCGGGCTG +
Preference number: 2 (lower is better)
Translates to: VPSVQEGALETCTGGSRIKAHYP*KPTGGL
Trigger: CAGCCCGCCTGTTGGCTTGCAGGGGTAATGAGCCTT...GATTCGGGACCCACCTGTACATGTTTCCAAAGCTCCTTCCTGCACACTCGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR-3UTR GCA 90 bp AGGCAGACAATCATGCTGCGGGTTTCTGGGTGGGGACTGGAATTCCAGGCATCATCGGGGCTCAGAAGCTaGTCCGCGGAGCTTTGCATA +
Preference number: 2 (lower is better)
Translates to: RQTIMLRVSGWGLEFQASSGLRS*SAELCI
Trigger: TATGCAAAGCTCCGCGGAGCAGCTTCTGAGCCCCGA...TGATGCCTGGAATTCCAGTCCCCACCCAGAAACCCGCAGCATGATTGTCTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000590884.5
3UTR-3UTR CCA 90 bp GGAGGCAGACAATCATGCTGCGGGTTTCTGGGTGGGGACTGGAATTCCAGGCATCATGCTGCGGGTTTCTaGGTGGGGACTGGAATTCCA +
Preference number: 2 (lower is better)
Translates to: GGRQSCCGFLGGDWNSRHHAAGF*VGTGIP
Trigger: TGGAATTCCAGTCCCCACCCAGAAACCCGCAGCATG...ATGCCTGGAATTCCAGTCCCCACCCAGAAACCCGCAGCATGATTGTCTGCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
3UTR-3UTR CCA 90 bp GGAGGCAGACAATCATGCTGCGGGTTTCTGGGTGGGGACTGGAATTCCAGGCATGTGCAGGTCCTTCCATaGCAGTTTCCGGTACGTGCT +
Preference number: 2 (lower is better)
Translates to: GGRQSCCGFLGGDWNSRHVQVLP*QFPVRA
Trigger: AGCACGTACCGGAAACTGCCATGGAAGGACCTGCAC...ATGCCTGGAATTCCAGTCCCCACCCAGAAACCCGCAGCATGATTGTCTGCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000592272.5
3UTR CAA 90 bp GAGTCACGCCTTGGAGCTGAGGTCCCGAGTGTGCAGGAAGGAGCTTaGGAAACATGTACAGGTGGGTCCCGAATCCACTGCTACTGTCAT +
Preference number: 2 (lower is better)
Translates to: ESRLGAEVPSVQEGA*ETCTGGSRIHCYCH
Trigger: ATGACAGTAGCAGTGGATTCGGGACCCACCTGTACATGTTTCCAAAGCTCCTTCCTGCACACTCGGGACCTCAGCTCCAAGGCGTGACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR-3UTR TCA 90 bp CACCTGCAAGCAAGCACCAACTTAAATGTATGCCCCAGGTGCCTCATTTGTCTCGTCACGCCTTGGAGCTaGGGTCCCGAGTGTGCAGGA +
Preference number: 2 (lower is better)
Translates to: HLQASTNLNVCPRCLICLVTPWS*GPECAG
Trigger: TCCTGCACACTCGGGACCTCAGCTCCAAGGCGTGAC...GAGACAAATGAGGCACCTGGGGCATACATTTAAGTTGGTGCTTGCTTGCAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR-3UTR GCA 90 bp GTCCCGAGTGTGCAGGAAGGAGCTTTGGAAACATGTACAGGTGGGTCCCGAATCGAAACCACAGCCCCGTaGTCTCTGGAGGCCAACAAT +
Preference number: 2 (lower is better)
Translates to: VPSVQEGALETCTGGSRIETTAP*SLEANN
Trigger: ATTGTTGGCCTCCAGAGAGCACGGGGCTGTGGTTTC...GATTCGGGACCCACCTGTACATGTTTCCAAAGCTCCTTCCTGCACACTCGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR-3UTR GCA 90 bp ATGACGCTGCGTCTCATCGCTGACGTAATCCACAATAGTAAAGAAAAGGCTAATGCCCTCGGTGGACGCTaGCCCCTGCTGGCAGCTGGG +
Preference number: 2 (lower is better)
Translates to: MTLRLIADVIHNSKEKANALGGR*PLLAAG
Trigger: CCCAGCTGCCAGCAGGGGGCAGCGTCCACCGAGGGC...ATTAGCCTTTTCTTTACTATTGTGGATTACGTCAGCGATGAGACGCAGCGTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587884.1
3UTR-3UTR GCA 90 bp TCTGTAGTCTCAGCCATGTGGCGGACGGACGCCAGGCTCTGGCAGGCTGCTGTTTGGTTTAGCAGCTTCTaGTTGCAACTGCTTCACTTC +
Preference number: 2 (lower is better)
Translates to: SVVSAMWRTDARLWQAAVWFSSF*LQLLHF
Trigger: GAAGTGAAGCAGTTGCAAGCAGAAGCTGCTAAACCA...AACAGCAGCCTGCCAGAGCCTGGCGTCCGTCCGCCACATGGCTGAGACTACAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587884.1
3UTR-3UTR CCA 90 bp CACCTGCAAGCAAGCACCAACTTAAATGTATGCCCCAGGTGCCTCATTTGTCTCCCCTGTGGTGAAGTCTaGAGCCTGCAGCCGTTCGCC +
Preference number: 2 (lower is better)
Translates to: HLQASTNLNVCPRCLICLPCGEV*SLQPFA
Trigger: GGCGAACGGCTGCAGGCTCCAGACTTCACCACAGGG...GAGACAAATGAGGCACCTGGGGCATACATTTAAGTTGGTGCTTGCTTGCAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR-3UTR CCA 90 bp ATTAATAGGCAGTGGGACAACATGATTCCGGGATGCAGCCTGCCTCTGCAACCCCTGTGCACTGCAGCATaGGGAGTGATGGAGAGGGAG +
Preference number: 2 (lower is better)
Translates to: INRQWDNMIPGCSLPLQPLCTAA*GVMERE
Trigger: CTCCCTCTCCATCACTCCCCATGCTGCAGTGCACAG...GGGTTGCAGAGGCAGGCTGCATCCCGGAATCATGTTGTCCCACTGCCTATTAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR-3UTR CCA 90 bp GTAGGAATAGAAAGGCCCGCAGACACTTTTAGGAGCTTCATGATTAATTCAGCAGACGCTGCCCCCTGCTaGCAGCTGGGGGCGCAGCAG +
Preference number: 2 (lower is better)
Translates to: VGIERPADTFRSFMINSADAAPC*QLGAQQ
Trigger: CTGCTGCGCCCCCAGCTGCCAGCAGGGGGCAGCGTC...TGCTGAATTAATCATGAAGCTCCTAAAAGTGTCTGCGGGCCTTTCTATTCCTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000590884.5
3UTR-3UTR CCA 90 bp GGAGGCAGACAATCATGCTGCGGGTTTCTGGGTGGGGACTGGAATTCCAGGCATTGCACACCAGCTGGGTaGCGTCCTTCTGACTCAATA +
Preference number: 2 (lower is better)
Translates to: GGRQSCCGFLGGDWNSRHCTPAG*RPSDSI
Trigger: TATTGAGTCAGAAGGACGCCACCCAGCTGGTGTGCA...ATGCCTGGAATTCCAGTCCCCACCCAGAAACCCGCAGCATGATTGTCTGCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587884.1
3UTR-3UTR CCA 90 bp CTCCATGAGCATCTGGTCAGGGTGCAGGTCCTTCCATGGCAGTTTCCGGTACGTAAAGAACTGCCTTGTTaGGGGATGACGCTGCGTCTC +
Preference number: 2 (lower is better)
Translates to: LHEHLVRVQVLPWQFPVRKELPC*GMTLRL
Trigger: GAGACGCAGCGTCATCCCCCAACAAGGCAGTTCTTT...ACGTACCGGAAACTGCCATGGAAGGACCTGCACCCTGACCAGATGCTCATGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587884.1
3UTR-3UTR TCA 90 bp ATTAATAGGCAGTGGGACAACATGATTCCGGGATGCAGCCTGCCTCTGCAACCCGCCAGCTTGCCATCCTaGTTCAGACAGGCAGCTTCT +
Preference number: 2 (lower is better)
Translates to: INRQWDNMIPGCSLPLQPASLPS*FRQAAS
Trigger: AGAAGCTGCCTGTCTGAATCAGGATGGCAAGCTGGC...GGGTTGCAGAGGCAGGCTGCATCCCGGAATCATGTTGTCCCACTGCCTATTAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR-3UTR TCA 90 bp GGAGGCAGACAATCATGCTGCGGGTTTCTGGGTGGGGACTGGAATTCCAGGCATTCTGCTCTGTCTGAATaGGGGAGAGCTGAAGGACTT +
Preference number: 2 (lower is better)
Translates to: GGRQSCCGFLGGDWNSRHSALSE*GRAEGL
Trigger: AAGTCCTTCAGCTCTCCCTCATTCAGACAGAGCAGA...ATGCCTGGAATTCCAGTCCCCACCCAGAAACCCGCAGCATGATTGTCTGCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
3UTR-3UTR GCA 90 bp GGTCCCGAGTGTGCAGGAAGGAGCTTTGGAAACATGTACAGGTGGGTCCCGAATCATCTGTGCAAAACATaGTCCTCCCAGACTGCCAGC +
Preference number: 2 (lower is better)
Translates to: GPECAGRSFGNMYRWVPNHLCKT*SSQTAS
Trigger: GCTGGCAGTCTGGGAGGAGCATGTTTTGCACAGATG...ATTCGGGACCCACCTGTACATGTTTCCAAAGCTCCTTCCTGCACACTCGGGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR-3UTR GCA 90 bp CTCCGCGGAGCTTTGCATAAGCAGCCTGAGAATGTCACTGTACTGGTCAGGAAATCCAGGTCCGGATACTaGCCCGAAGGAACTCTGCTG +
Preference number: 2 (lower is better)
Translates to: LRGALHKQPENVTVLVRKSRSGY*PEGTLL
Trigger: CAGCAGAGTTCCTTCGGGGCAGTATCCGGACCTGGA...TTTCCTGACCAGTACAGTGACATTCTCAGGCTGCTTATGCAAAGCTCCGCGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000590884.5
3UTR-3UTR CCA 90 bp GTCCCGAGTGTGCAGGAAGGAGCTTTGGAAACATGTACAGGTGGGTCCCGAATCTTGTGTAGACACATCTaGCAGGACCTCCCTCCCTCT +
Preference number: 2 (lower is better)
Translates to: VPSVQEGALETCTGGSRILCRHI*QDLPPS
Trigger: AGAGGGAGGGAGGTCCTGCCAGATGTGTCTACACAA...GATTCGGGACCCACCTGTACATGTTTCCAAAGCTCCTTCCTGCACACTCGGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR-3UTR CCA 90 bp CACCTGCAAGCAAGCACCAACTTAAATGTATGCCCCAGGTGCCTCATTTGTCTCCTGCCCATCACAGGCTaGACCACCAGGCACTGGACA +
Preference number: 2 (lower is better)
Translates to: HLQASTNLNVCPRCLICLLPITG*TTRHWT
Trigger: TGTCCAGTGCCTGGTGGTCCAGCCTGTGATGGGCAG...GAGACAAATGAGGCACCTGGGGCATACATTTAAGTTGGTGCTTGCTTGCAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR-3UTR CCA 90 bp TGCATCAAGATGCTTCTGGCTGTCAGTAGGAATAGAAAGGCCCGCAGACACTTTGAGCATCAGAAGAGCTaGGAAGCACGGCGCCCTCGG +
Preference number: 2 (lower is better)
Translates to: CIKMLLAVSRNRKARRHFEHQKS*EARRPR
Trigger: CCGAGGGCGCCGTGCTTCCCAGCTCTTCTGATGCTC...AAAGTGTCTGCGGGCCTTTCTATTCCTACTGACAGCCAGAAGCATCTTGATGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000590884.5
3UTR-3UTR CCA 90 bp TTAGACAAAGGCGACTTCCGGCCAAACCCAATTGCCCCCAGGATCCCAGAGCTGTTTCTGGGTGGGGACTaGAATTCCAGGCATCAGAGA +
Preference number: 2 (lower is better)
Translates to: LDKGDFRPNPIAPRIPELFLGGD*NSRHQR
Trigger: TCTCTGATGCCTGGAATTCCAGTCCCCACCCAGAAA...CAGCTCTGGGATCCTGGGGGCAATTGGGTTTGGCCGGAAGTCGCCTTTGTCTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
3UTR-3UTR CCA 90 bp CTGCCCCGAAGGAACTCTGCTGTTGGAATAGTCGCGTTGTTCATCATCATCAGGCTGCGGGTTTCTGGGTaGGGACTGGAATTCCAGGCA +
Preference number: 2 (lower is better)
Translates to: LPRRNSAVGIVALFIIIRLRVSG*GLEFQA
Trigger: TGCCTGGAATTCCAGTCCCCACCCAGAAACCCGCAG...CCTGATGATGATGAACAACGCGACTATTCCAACAGCAGAGTTCCTTCGGGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
3UTR-3UTR CCA 90 bp AATGACAGATTCTGTCAGGACGGAGTCATTCTGCTCTGTCTGAATGAGGGAGAGGTAGTCTCAGCCATGTaGCGGACGGACGCCAGGCTC +
Preference number: 2 (lower is better)
Translates to: NDRFCQDGVILLCLNEGEVVSAM*RTDARL
Trigger: GAGCCTGGCGTCCGTCCGCCACATGGCTGAGACTAC...CTCTCCCTCATTCAGACAGAGCAGAATGACTCCGTCCTGACAGAATCTGTCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
3UTR-3UTR CCA 90 bp CATGCTGCGGGTTTCTGGGTGGGGACTGGAATTCCAGGCATCAGAGAGCACACTAATGGGACTCAAGCTTaGCCTGTGTCCACAGACCAA +
Preference number: 2 (lower is better)
Translates to: HAAGFWVGTGIPGIREHTNGTQA*PVSTDQ
Trigger: TTGGTCTGTGGACACAGGCCAAGCTTGAGTCCCATT...AGTGTGCTCTCTGATGCCTGGAATTCCAGTCCCCACCCAGAAACCCGCAGCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587884.1
3UTR CAA 90 bp CAGGTGGGTCCCGAATCCACTGCTACTGTCATGCTATGTAGACAGTaGTGTAGACACATCTGGCAGGACCTCCCTCCCTCTATGTCTGGT +
Preference number: 2 (lower is better)
Translates to: QVGPESTATVMLCRQ*CRHIWQDLPPSMSG
Trigger: ACCAGACATAGAGGGAGGGAGGTCCTGCCAGATGTGTCTACACAACTGTCTACATAGCATGACAGTAGCAGTGGATTCGGGACCCACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR CAA 90 bp GTCCGGATACTGCCCCGAAGGAACTCTGCTGTTGGAATAGTCGCGTaGTTCATCATCATCAGGACTTCCATAAAGAGGCTGCTGAGGGCC +
Preference number: 2 (lower is better)
Translates to: VRILPRRNSAVGIVA*FIIIRTSIKRLLRA
Trigger: GGCCCTCAGCAGCCTCTTTATGGAAGTCCTGATGATGATGAACAACGCGACTATTCCAACAGCAGAGTTCCTTCGGGGCAGTATCCGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
3UTR CAA 90 bp GACGGAGTCATTCTGCTCTGTCTGAATGAGGGAGAGCTGAAGGACTaGGTGCCACCACAAAAACAGCTTTGCCTCTTCCTCCACGGAGCT +
Preference number: 2 (lower is better)
Translates to: DGVILLCLNEGELKD*VPPQKQLCLFLHGA
Trigger: AGCTCCGTGGAGGAAGAGGCAAAGCTGTTTTTGTGGTGGCACCAAGTCCTTCAGCTCTCCCTCATTCAGACAGAGCAGAATGACTCCGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
3UTR-3UTR TCA 90 bp CACCTGCAAGCAAGCACCAACTTAAATGTATGCCCCAGGTGCCTCATTTGTCTCCAGGCAGCTTCTCCATaGGGATACACGGCTGGATGG +
Preference number: 2 (lower is better)
Translates to: HLQASTNLNVCPRCLICLQAASP*GYTAGW
Trigger: CCATCCAGCCGTGTATCCTCATGGAGAAGCTGCCTG...GAGACAAATGAGGCACCTGGGGCATACATTTAAGTTGGTGCTTGCTTGCAGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR-3UTR GCA 90 bp GTCCCGAATCCACTGCTACTGTCATGCTATGTAGACAGTTGTGTAGACACATCTGTGAAGTCTGGAGCCTaGAGCCGTTCGCCCTCCACG +
Preference number: 2 (lower is better)
Translates to: VPNPLLLSCYVDSCVDTSVKSGA*SRSPST
Trigger: CGTGGAGGGCGAACGGCTGCAGGCTCCAGACTTCAC...AGATGTGTCTACACAACTGTCTACATAGCATGACAGTAGCAGTGGATTCGGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR-3UTR GCA 90 bp CACCTGCAAGCAAGCACCAACTTAAATGTATGCCCCAGGTGCCTCATTTGTCTCAGCCCCAGCCTGAACTaGTCTGGACAGAACCACGAC +
Preference number: 2 (lower is better)
Translates to: HLQASTNLNVCPRCLICLSPSLN*SGQNHD
Trigger: GTCGTGGTTCTGTCCAGAGCAGTTCAGGCTGGGGCT...GAGACAAATGAGGCACCTGGGGCATACATTTAAGTTGGTGCTTGCTTGCAGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR-3UTR GCA 90 bp TTCTGGCTGTCAGTAGGAATAGAAAGGCCCGCAGACACTTTTAGGAGCTTCATGCCGGCCAAACCCAATTaGCCCCAGGATCCCAGAGCT +
Preference number: 2 (lower is better)
Translates to: FWLSVGIERPADTFRSFMPAKPN*PQDPRA
Trigger: AGCTCTGGGATCCTGGGGGCAATTGGGTTTGGCCGG...CATGAAGCTCCTAAAAGTGTCTGCGGGCCTTTCTATTCCTACTGACAGCCAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
3UTR-3UTR CCA 90 bp ATTAATAGGCAGTGGGACAACATGATTCCGGGATGCAGCCTGCCTCTGCAACCCTTCGGCAACTGTGAGTaGCTCTGCACCCAAGTGGAA +
Preference number: 2 (lower is better)
Translates to: INRQWDNMIPGCSLPLQPFGNCE*LCTQVE
Trigger: TTCCACTTGGGTGCAGAGCCACTCACAGTTGCCGAA...GGGTTGCAGAGGCAGGCTGCATCCCGGAATCATGTTGTCCCACTGCCTATTAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR-3UTR CCA 90 bp CAGCCTAGGCCTGCCCATCACAGGCTGGACCACCAGGCACTGGACAGGGGCAGACAAGGTTGTCAGATCTaGAACATTTACATAAAACAG +
Preference number: 2 (lower is better)
Translates to: QPRPAHHRLDHQALDRGRQGCQI*NIYIKQ
Trigger: CTGTTTTATGTAAATGTTCCAGATCTGACAACCTTG...TCTGCCCCTGTCCAGTGCCTGGTGGTCCAGCCTGTGATGGGCAGGCCTAGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR-3UTR CCA 90 bp AGTGTTAGAAAGGCGCTTCCTTACCTGTTAGACAAAGGCGACTTCCGGCCAAACCTGCGGGTTTCTGGGTaGGGACTGGAATTCCAGGCA +
Preference number: 2 (lower is better)
Translates to: SVRKALPYLLDKGDFRPNLRVSG*GLEFQA
Trigger: TGCCTGGAATTCCAGTCCCCACCCAGAAACCCGCAG...GTTTGGCCGGAAGTCGCCTTTGTCTAACAGGTAAGGAAGCGCCTTTCTAACACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
3UTR-3UTR CCA 90 bp TCTTCCTCCACGGAGCTTGGGTACACCTGTTCCAGCCACTTGCTTAAGATGAGCAGCAGAGGAAATAACTaGCACAGGAGGCTTCGTCGG +
Preference number: 2 (lower is better)
Translates to: SSSTELGYTCSSHLLKMSSRGNN*HRRLRR
Trigger: CCGACGAAGCCTCCTGTGCCAGTTATTTCCTCTGCT...GCTCATCTTAAGCAAGTGGCTGGAACAGGTGTACCCAAGCTCCGTGGAGGAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587884.1
3UTR-3UTR TCA 90 bp GTCCCGAATCCACTGCTACTGTCATGCTATGTAGACAGTTGTGTAGACACATCTGGCAGTGGGACAACATaGTTCCGGGATGCAGCCTGC +
Preference number: 2 (lower is better)
Translates to: VPNPLLLSCYVDSCVDTSGSGTT*FRDAAC
Trigger: GCAGGCTGCATCCCGGAATCATGTTGTCCCACTGCC...AGATGTGTCTACACAACTGTCTACATAGCATGACAGTAGCAGTGGATTCGGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR-3UTR TCA 90 bp CTGCCCCGAAGGAACTCTGCTGTTGGAATAGTCGCGTTGTTCATCATCATCAGGATTCTTTTGCCAGGATaGTGGACGGCGGGTAATGGC +
Preference number: 2 (lower is better)
Translates to: LPRRNSAVGIVALFIIIRILLPG*WTAGNG
Trigger: GCCATTACCCGCCGTCCATCATCCTGGCAAAAGAAT...CCTGATGATGATGAACAACGCGACTATTCCAACAGCAGAGTTCCTTCGGGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
3UTR-3UTR TCA 90 bp AGTGTTAGAAAGGCGCTTCCTTACCTGTTAGACAAAGGCGACTTCCGGCCAAACGTGAGCTCGGGAACCTaGAGGGATACCAGAATGGGT +
Preference number: 2 (lower is better)
Translates to: SVRKALPYLLDKGDFRPNVSSGT*RDTRMG
Trigger: ACCCATTCTGGTATCCCTTCAGGTTCCCGAGCTCAC...GTTTGGCCGGAAGTCGCCTTTGTCTAACAGGTAAGGAAGCGCCTTTCTAACACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
3UTR-3UTR GCA 90 bp ATTAATAGGCAGTGGGACAACATGATTCCGGGATGCAGCCTGCCTCTGCAACCCACAGGGCCTTGGTCTTaGTTGATTCCCGTCTTGATG +
Preference number: 2 (lower is better)
Translates to: INRQWDNMIPGCSLPLQPTGPWS*LIPVLM
Trigger: CATCAAGACGGGAATCAAGCAAGACCAAGGCCCTGT...GGGTTGCAGAGGCAGGCTGCATCCCGGAATCATGTTGTCCCACTGCCTATTAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR-3UTR GCA 90 bp GATACTGCCCCGAAGGAACTCTGCTGTTGGAATAGTCGCGTTGTTCATCATCATGGAGGCAGACAATCATaGTGCGGGTTTCTGGGTGGG +
Preference number: 2 (lower is better)
Translates to: DTAPKELCCWNSRVVHHHGGRQS*CGFLGG
Trigger: CCCACCCAGAAACCCGCAGCATGATTGTCTGCCTCC...ATGATGATGAACAACGCGACTATTCCAACAGCAGAGTTCCTTCGGGGCAGTATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
3UTR-3UTR CCA 90 bp TTCTGGCTGTCAGTAGGAATAGAAAGGCCCGCAGACACTTTTAGGAGCTTCATGGCCTCCATGAGCATCTaGTCAGGGTGCAGGTCCTTC +
Preference number: 2 (lower is better)
Translates to: FWLSVGIERPADTFRSFMASMSI*SGCRSF
Trigger: GAAGGACCTGCACCCTGACCAGATGCTCATGGAGGC...CATGAAGCTCCTAAAAGTGTCTGCGGGCCTTTCTATTCCTACTGACAGCCAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000592272.5
3UTR-3UTR TCA 90 bp CACCTGCAAGCAAGCACCAACTTAAATGTATGCCCCAGGTGCCTCATTTGTCTCGGAGGTCTTGTGAGATaGCTGGGACATTCGGCAACT +
Preference number: 2 (lower is better)
Translates to: HLQASTNLNVCPRCLICLGGLVR*LGHSAT
Trigger: AGTTGCCGAATGTCCCAGTCATCTCACAAGACCTCC...GAGACAAATGAGGCACCTGGGGCATACATTTAAGTTGGTGCTTGCTTGCAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR-3UTR TCA 90 bp TCGACAGGGGCAAGTGATGTGAATGAGGCTAGGGTCAGGGCCCGAGGGAATGCAGTCGTATTTTACACATaGCCCACTTTAACTAACTCG +
Preference number: 2 (lower is better)
Translates to: STGASDVNEARVRARGNAVVFYT*PTLTNS
Trigger: CGAGTTAGTTAAAGTGGGTCATGTGTAAAATACGAC...TGCATTCCCTCGGGCCCTGACCCTAGCCTCATTCACATCACTTGCCCCTGTCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR-3UTR TCA 90 bp GTCCCGAGTGTGCAGGAAGGAGCTTTGGAAACATGTACAGGTGGGTCCCGAATCCGGCTGGATGGAAATTaGCTTGTCATCATCTCTACT +
Preference number: 2 (lower is better)
Translates to: VPSVQEGALETCTGGSRIRLDGN*LVIIST
Trigger: AGTAGAGATGATGACAAGTCAATTTCCATCCAGCCG...GATTCGGGACCCACCTGTACATGTTTCCAAAGCTCCTTCCTGCACACTCGGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR-3UTR TCA 90 bp GCCCCGAAGGAACTCTGCTGTTGGAATAGTCGCGTTGTTCATCATCATCAGGACAGGTTCTGCCTGCTCTaGACCAAGAGCAGAATTCGA +
Preference number: 2 (lower is better)
Translates to: APKELCCWNSRVVHHHQDRFCLL*TKSRIR
Trigger: TCGAATTCTGCTCTTGGTTCAGAGCAGGCAGAACCT...GTCCTGATGATGATGAACAACGCGACTATTCCAACAGCAGAGTTCCTTCGGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
3UTR-3UTR GCA 90 bp ATTAATAGGCAGTGGGACAACATGATTCCGGGATGCAGCCTGCCTCTGCAACCCAACTGTGAGTGGCTCTaGACCCAAGTGGAACTTAGT +
Preference number: 2 (lower is better)
Translates to: INRQWDNMIPGCSLPLQPNCEWL*TQVELS
Trigger: ACTAAGTTCCACTTGGGTGCAGAGCCACTCACAGTT...GGGTTGCAGAGGCAGGCTGCATCCCGGAATCATGTTGTCCCACTGCCTATTAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR-3UTR GCA 90 bp AATTTCAGTAGATCTCCCGACCTGACCCAGTTTCCACAGACAAGTGTTTCAGCAAGAGGCAGCCCTGTCTaGACTCCTCACCAAGTGGAC +
Preference number: 2 (lower is better)
Translates to: NFSRSPDLTQFPQTSVSARGSPV*TPHQVD
Trigger: GTCCACTTGGTGAGGAGTGCAGACAGGGCTGCCTCT...TGCTGAAACACTTGTCTGTGGAAACTGGGTCAGGTCGGGAGATCTACTGAAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR-3UTR GCA 90 bp AGACAATCATGCTGCGGGTTTCTGGGTGGGGACTGGAATTCCAGGCATCAGAGAGGAACTGCATCAAGATaGTTCTGGCTGTCAGTAGGA +
Preference number: 2 (lower is better)
Translates to: RQSCCGFLGGDWNSRHQRGTASR*FWLSVG
Trigger: TCCTACTGACAGCCAGAAGCATCTTGATGCAGTTCC...TCTCTGATGCCTGGAATTCCAGTCCCCACCCAGAAACCCGCAGCATGATTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
3UTR-3UTR GCA 90 bp AGCCACGAGGTTCTGCCTGCTCTGAACCAAGAGCAGAATTCGAATGACAGATTCGCCCCGAAGGAACTCTaGTGTTGGAATAGTCGCGTT +
Preference number: 2 (lower is better)
Translates to: SHEVLPALNQEQNSNDRFAPKEL*CWNSRV
Trigger: AACGCGACTATTCCAACAGCAGAGTTCCTTCGGGGC...GAATCTGTCATTCGAATTCTGCTCTTGGTTCAGAGCAGGCAGAACCTCGTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
3UTR-3UTR GCA 90 bp AGTGTTAGAAAGGCGCTTCCTTACCTGTTAGACAAAGGCGACTTCCGGCCAAACGCCCCGAAGGAACTCTaGTGTTGGAATAGTCGCGTT +
Preference number: 2 (lower is better)
Translates to: SVRKALPYLLDKGDFRPNAPKEL*CWNSRV
Trigger: AACGCGACTATTCCAACAGCAGAGTTCCTTCGGGGC...GTTTGGCCGGAAGTCGCCTTTGTCTAACAGGTAAGGAAGCGCCTTTCTAACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
3UTR-3UTR CCA 90 bp GTCCCGAGTGTGCAGGAAGGAGCTTTGGAAACATGTACAGGTGGGTCCCGAATCGAGAGATGTTTTTCATaGCAACCAGAATCCTGCCTC +
Preference number: 2 (lower is better)
Translates to: VPSVQEGALETCTGGSRIERCFS*QPESCL
Trigger: GAGGCAGGATTCTGGTTGCCATGAAAAACATCTCTC...GATTCGGGACCCACCTGTACATGTTTCCAAAGCTCCTTCCTGCACACTCGGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR-3UTR CCA 90 bp CACCTGCAAGCAAGCACCAACTTAAATGTATGCCCCAGGTGCCTCATTTGTCTCTTGTGTAGACACATCTaGCAGGACCTCCCTCCCTCT +
Preference number: 2 (lower is better)
Translates to: HLQASTNLNVCPRCLICLLCRHI*QDLPPS
Trigger: AGAGGGAGGGAGGTCCTGCCAGATGTGTCTACACAA...GAGACAAATGAGGCACCTGGGGCATACATTTAAGTTGGTGCTTGCTTGCAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR-3UTR CCA 90 bp TGCTGTACATGCTTCACAATAATGCATCAGGTGCAACCAAAGGGCTCCTGCATCTTCCTCCACGGAGCTTaGGTACACCTGTTCCAGCCA +
Preference number: 2 (lower is better)
Translates to: CCTCFTIMHQVQPKGSCIFLHGA*VHLFQP
Trigger: TGGCTGGAACAGGTGTACCCAAGCTCCGTGGAGGAA...GATGCAGGAGCCCTTTGGTTGCACCTGATGCATTATTGTGAAGCATGTACAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000592272.5
3UTR-3UTR CCA 90 bp TTTTGGCCAATCCAGGTCCGGATACTGCCCCGAAGGAACTCTGCTGTTGGAATAACAAACTGCAGGGTGTaGAATGGGACTCAAGCTTGG +
Preference number: 2 (lower is better)
Translates to: FWPIQVRILPRRNSAVGITNCRV*NGTQAW
Trigger: CCAAGCTTGAGTCCCATTCCACACCCTGCAGTTTGT...TATTCCAACAGCAGAGTTCCTTCGGGGCAGTATCCGGACCTGGATTGGCCAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587884.1
3UTR-3UTR TCA 90 bp GCCCCGAAGGAACTCTGCTGTTGGAATAGTCGCGTTGTTCATCATCATCAGGACGCGGGTAATGGCTGCTaGAATAACTTAGCACACTCT +
Preference number: 2 (lower is better)
Translates to: APKELCCWNSRVVHHHQDAGNGC*NNLAHS
Trigger: AGAGTGTGCTAAGTTATTTCAGCAGCCATTACCCGC...GTCCTGATGATGATGAACAACGCGACTATTCCAACAGCAGAGTTCCTTCGGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
3UTR-3UTR TCA 90 bp GGAGGCAGACAATCATGCTGCGGGTTTCTGGGTGGGGACTGGAATTCCAGGCATCTAGGACTGCTAAGGTaGTTTTTCCATTTTGTTCCA +
Preference number: 2 (lower is better)
Translates to: GGRQSCCGFLGGDWNSRHLGLLR*FFHFVP
Trigger: TGGAACAAAATGGAAAAATCACCTTAGCAGTCCTAG...ATGCCTGGAATTCCAGTCCCCACCCAGAAACCCGCAGCATGATTGTCTGCCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
3UTR-3UTR TCA 90 bp AGCACACTCTGGTACGACACAATATCCACAAGATGCCATGAAAGTGAGCTTGTCCCAGCAAAGGATCAGTaGAGTCCAGCTGCACGGACA +
Preference number: 2 (lower is better)
Translates to: STLWYDTISTRCHESELVPAKDQ*SPAART
Trigger: TGTCCGTGCAGCTGGACTTCACTGATCCTTTGCTGG...GACAAGCTCACTTTCATGGCATCTTGTGGATATTGTGTCGTACCAGAGTGTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587884.1
3UTR-3UTR GCA 90 bp ATTAATAGGCAGTGGGACAACATGATTCCGGGATGCAGCCTGCCTCTGCAACCCGTGTCTATCAAAGGGTaGAAACTTAGGTGTCGACAG +
Preference number: 2 (lower is better)
Translates to: INRQWDNMIPGCSLPLQPVSIKG*KLRCRQ
Trigger: CTGTCGACACCTAAGTTTGCACCCTTTGATAGACAC...GGGTTGCAGAGGCAGGCTGCATCCCGGAATCATGTTGTCCCACTGCCTATTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR-3UTR GCA 90 bp CACCTGCAAGCAAGCACCAACTTAAATGTATGCCCCAGGTGCCTCATTTGTCTCACAGGGCCTTGGTCTTaGTTGATTCCCGTCTTGATG +
Preference number: 2 (lower is better)
Translates to: HLQASTNLNVCPRCLICLTGPWS*LIPVLM
Trigger: CATCAAGACGGGAATCAAGCAAGACCAAGGCCCTGT...GAGACAAATGAGGCACCTGGGGCATACATTTAAGTTGGTGCTTGCTTGCAGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR-3UTR GCA 90 bp TCACCTTCATTTGAAAGGAACGAGGACATGAACACTCTTGGCTTGTATGACATGTTCCGGGATGCAGCCTaGCTCTGCAACCCACCTGTG +
Preference number: 2 (lower is better)
Translates to: SPSFERNEDMNTLGLYDMFRDAA*LCNPPV
Trigger: CACAGGTGGGTTGCAGAGGCAGGCTGCATCCCGGAA...CATGTCATACAAGCCAAGAGTGTTCATGTCCTCGTTCCTTTCAAATGAAGGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR-3UTR GCA 90 bp TGCTGGCAGTTGGGTCTTGGGCCAAACAGGTCATTTCTAAGTCAATCAGCCTTTTGCTCCGCGGAGCTTTaGATAAGCAGCCTGAGAATG +
Preference number: 2 (lower is better)
Translates to: CWQLGLGPNRSFLSQSAFCSAEL*ISSLRM
Trigger: CATTCTCAGGCTGCTTATGCAAAGCTCCGCGGAGCA...AAAGGCTGATTGACTTAGAAATGACCTGTTTGGCCCAAGACCCAACTGCCAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000590884.5
3UTR-3UTR GCA 90 bp GATACTGCCCCGAAGGAACTCTGCTGTTGGAATAGTCGCGTTGTTCATCATCATTCAGCACTGTTTTCCTaGTGGCAGTTGGGTCTTGGG +
Preference number: 2 (lower is better)
Translates to: DTAPKELCCWNSRVVHHHSALFS*WQLGLG
Trigger: CCCAAGACCCAACTGCCAGCAGGAAAACAGTGCTGA...ATGATGATGAACAACGCGACTATTCCAACAGCAGAGTTCCTTCGGGGCAGTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000590884.5
3UTR-3UTR GCA 90 bp ACCACAAAAACAGCTTTGCCTCTTCCTCCACGGAGCTTGGGTACACCTGTTCCAGGAACTGCATCAAGATaGTTCTGGCTGTCAGTAGGA +
Preference number: 2 (lower is better)
Translates to: TTKTALPLPPRSLGTPVPGTASR*FWLSVG
Trigger: TCCTACTGACAGCCAGAAGCATCTTGATGCAGTTCC...TGGAACAGGTGTACCCAAGCTCCGTGGAGGAAGAGGCAAAGCTGTTTTTGTGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
3UTR-3UTR GCA 90 bp TTTTGGCCAATCCAGGTCCGGATACTGCCCCGAAGGAACTCTGCTGTTGGAATAGGAACTGCATCAAGATaGTTCTGGCTGTCAGTAGGA +
Preference number: 2 (lower is better)
Translates to: FWPIQVRILPRRNSAVGIGTASR*FWLSVG
Trigger: TCCTACTGACAGCCAGAAGCATCTTGATGCAGTTCC...TATTCCAACAGCAGAGTTCCTTCGGGGCAGTATCCGGACCTGGATTGGCCAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
3UTR-3UTR CCA 90 bp ATTAATAGGCAGTGGGACAACATGATTCCGGGATGCAGCCTGCCTCTGCAACCCGGCTCTGCACCCAAGTaGAACTTAGTAAGTTTCTCT +
Preference number: 2 (lower is better)
Translates to: INRQWDNMIPGCSLPLQPGSAPK*NLVSFS
Trigger: AGAGAAACTTACTAAGTTCCACTTGGGTGCAGAGCC...GGGTTGCAGAGGCAGGCTGCATCCCGGAATCATGTTGTCCCACTGCCTATTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR-3UTR CCA 90 bp GGGGCAAGTGATGTGAATGAGGCTAGGGTCAGGGCCCGAGGGAATGCACAGACTTTGGAGGAACACAAATaGGGTTTAAAAGTAAGGGTA +
Preference number: 2 (lower is better)
Translates to: GASDVNEARVRARGNAQTLEEHK*GLKVRV
Trigger: TACCCTTACTTTTAAACCCCATTTGTGTTCCTCCAA...AGTCTGTGCATTCCCTCGGGCCCTGACCCTAGCCTCATTCACATCACTTGCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR-3UTR CCA 90 bp GGTCCCGAGTGTGCAGGAAGGAGCTTTGGAAACATGTACAGGTGGGTCCCGAATTCTATTAATAGGCAGTaGGACAACATGATTCCGGGA +
Preference number: 2 (lower is better)
Translates to: GPECAGRSFGNMYRWVPNSINRQ*DNMIPG
Trigger: TCCCGGAATCATGTTGTCCCACTGCCTATTAATAGA...ATTCGGGACCCACCTGTACATGTTTCCAAAGCTCCTTCCTGCACACTCGGGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR-3UTR CCA 90 bp GTCCCGAGTGTGCAGGAAGGAGCTTTGGAAACATGTACAGGTGGGTCCCGAATCTCTATTAATAGGCAGTaGGACAACATGATTCCGGGA +
Preference number: 2 (lower is better)
Translates to: VPSVQEGALETCTGGSRISINRQ*DNMIPG
Trigger: TCCCGGAATCATGTTGTCCCACTGCCTATTAATAGA...GATTCGGGACCCACCTGTACATGTTTCCAAAGCTCCTTCCTGCACACTCGGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR-3UTR CCA 90 bp CTCCGCGGAGCTTTGCATAAGCAGCCTGAGAATGTCACTGTACTGGTCAGGAAAATAAGAAACAGCTCTTaGGGCTTCCTCGTTCCACCT +
Preference number: 2 (lower is better)
Translates to: LRGALHKQPENVTVLVRKIRNSS*GFLVPP
Trigger: AGGTGGAACGAGGAAGCCCCAAGAGCTGTTTCTTAT...TTTCCTGACCAGTACAGTGACATTCTCAGGCTGCTTATGCAAAGCTCCGCGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590884.5
3UTR-3UTR CCA 90 bp AGTGTTAGAAAGGCGCTTCCTTACCTGTTAGACAAAGGCGACTTCCGGCCAAACTTTCTGGGTGGGGACTaGAATTCCAGGCATCAGAGA +
Preference number: 2 (lower is better)
Translates to: SVRKALPYLLDKGDFRPNFLGGD*NSRHQR
Trigger: TCTCTGATGCCTGGAATTCCAGTCCCCACCCAGAAA...GTTTGGCCGGAAGTCGCCTTTGTCTAACAGGTAAGGAAGCGCCTTTCTAACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
3UTR-3UTR CCA 90 bp CAACACTCGGGGCTCAGAAGCTGCTCCGCGGAGCTTTGCATAAGCAGCCTGAGAAAAAGCTTGGCATTTTaGAACTGCATCAAGATGCTT +
Preference number: 2 (lower is better)
Translates to: QHSGLRSCSAELCISSLRKSLAF*NCIKML
Trigger: AAGCATCTTGATGCAGTTCCAAAATGCCAAGCTTTT...TCTCAGGCTGCTTATGCAAAGCTCCGCGGAGCAGCTTCTGAGCCCCGAGTGTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000590884.5
3UTR-3UTR CCA 90 bp AGCACACTCTGGTACGACACAATATCCACAAGATGCCATGAAAGTGAGCTTGTCCTGCAGGGTGTGGAATaGGACTCAAGCTTGGCCTGT +
Preference number: 2 (lower is better)
Translates to: STLWYDTISTRCHESELVLQGVE*DSSLAC
Trigger: ACAGGCCAAGCTTGAGTCCCATTCCACACCCTGCAG...GACAAGCTCACTTTCATGGCATCTTGTGGATATTGTGTCGTACCAGAGTGTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587884.1
3UTR-3UTR TCA 90 bp ATTAATAGGCAGTGGGACAACATGATTCCGGGATGCAGCCTGCCTCTGCAACCCGCTCTACAGTGCAATTaGGCAAAGTTACTTGTGCAA +
Preference number: 2 (lower is better)
Translates to: INRQWDNMIPGCSLPLQPALQCN*AKLLVQ
Trigger: TTGCACAAGTAACTTTGCTCAATTGCACTGTAGAGC...GGGTTGCAGAGGCAGGCTGCATCCCGGAATCATGTTGTCCCACTGCCTATTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR-3UTR TCA 90 bp AATTTCAGTAGATCTCCCGACCTGACCCAGTTTCCACAGACAAGTGTTTCAGCAGGAGGTCTTGTGAGATaGCTGGGACATTCGGCAACT +
Preference number: 2 (lower is better)
Translates to: NFSRSPDLTQFPQTSVSAGGLVR*LGHSAT
Trigger: AGTTGCCGAATGTCCCAGTCATCTCACAAGACCTCC...TGCTGAAACACTTGTCTGTGGAAACTGGGTCAGGTCGGGAGATCTACTGAAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR-3UTR TCA 90 bp CACCTGCAAGCAAGCACCAACTTAAATGTATGCCCCAGGTGCCTCATTTGTCTCCTAGAGCTGATAGAATaGGGAACGTGGGAACAGAAG +
Preference number: 2 (lower is better)
Translates to: HLQASTNLNVCPRCLICLLELIE*GTWEQK
Trigger: CTTCTGTTCCCACGTTCCTCATTCTATCAGCTCTAG...GAGACAAATGAGGCACCTGGGGCATACATTTAAGTTGGTGCTTGCTTGCAGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR-3UTR GCA 90 bp GTCCCGAATCCACTGCTACTGTCATGCTATGTAGACAGTTGTGTAGACACATCTATGCTCCTCCCAGACTaGCAGCTTGCCATCCTGATT +
Preference number: 2 (lower is better)
Translates to: VPNPLLLSCYVDSCVDTSMLLPD*QLAILI
Trigger: AATCAGGATGGCAAGCTGGCAGTCTGGGAGGAGCAT...AGATGTGTCTACACAACTGTCTACATAGCATGACAGTAGCAGTGGATTCGGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR-3UTR GCA 90 bp GCTGTTGGAATAGTCGCGTTGTTCATCATCATCAGGACTTCCATAAAGAGGCTGTCAGCACTGTTTTCCTaGTGGCAGTTGGGTCTTGGG +
Preference number: 2 (lower is better)
Translates to: AVGIVALFIIIRTSIKRLSALFS*WQLGLG
Trigger: CCCAAGACCCAACTGCCAGCAGGAAAACAGTGCTGA...CAGCCTCTTTATGGAAGTCCTGATGATGATGAACAACGCGACTATTCCAACAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000590884.5
3UTR-3UTR GCA 90 bp TGCTGTACATGCTTCACAATAATGCATCAGGTGCAACCAAAGGGCTCCTGCATCGTTCTGGCCTGCTGTTaGAACAGATTCAGGTCTGTG +
Preference number: 2 (lower is better)
Translates to: CCTCFTIMHQVQPKGSCIVLACC*NRFRSV
Trigger: CACAGACCTGAATCTGTTGCAACAGCAGGCCAGAAC...GATGCAGGAGCCCTTTGGTTGCACCTGATGCATTATTGTGAAGCATGTACAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587884.1
3UTR-3UTR CCA 90 bp TCGACAGGGGCAAGTGATGTGAATGAGGCTAGGGTCAGGGCCCGAGGGAATGCAATAATCACGATCAAGTaGTCGTATTTTACACATGAC +
Preference number: 2 (lower is better)
Translates to: STGASDVNEARVRARGNAIITIK*SYFTHD
Trigger: GTCATGTGTAAAATACGACCACTTGATCGTGATTAT...TGCATTCCCTCGGGCCCTGACCCTAGCCTCATTCACATCACTTGCCCCTGTCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR-3UTR CCA 90 bp TCACCTTCATTTGAAAGGAACGAGGACATGAACACTCTTGGCTTGTATGACATGTCCCGATGCCACTGTTaGCCACCCTGTGGTGAAGTC +
Preference number: 2 (lower is better)
Translates to: SPSFERNEDMNTLGLYDMSRCHC*PPCGEV
Trigger: GACTTCACCACAGGGTGGCCAACAGTGGCATCGGGA...CATGTCATACAAGCCAAGAGTGTTCATGTCCTCGTTCCTTTCAAATGAAGGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR-3UTR CCA 90 bp ATTAATAGGCAGTGGGACAACATGATTCCGGGATGCAGCCTGCCTCTGCAACCCTTAGACATCTTTATTTaGTCCCGATGCCACTGTTGG +
Preference number: 2 (lower is better)
Translates to: INRQWDNMIPGCSLPLQPLDIFI*SRCHCW
Trigger: CCAACAGTGGCATCGGGACCAAATAAAGATGTCTAA...GGGTTGCAGAGGCAGGCTGCATCCCGGAATCATGTTGTCCCACTGCCTATTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR-3UTR CCA 90 bp AGTGTTAGAAAGGCGCTTCCTTACCTGTTAGACAAAGGCGACTTCCGGCCAAACGAAGGGATACCAGAATaGGTCCCCATCCTGAATTCT +
Preference number: 2 (lower is better)
Translates to: SVRKALPYLLDKGDFRPNEGIPE*VPILNS
Trigger: AGAATTCAGGATGGGGACCCATTCTGGTATCCCTTC...GTTTGGCCGGAAGTCGCCTTTGTCTAACAGGTAAGGAAGCGCCTTTCTAACACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
3UTR CAA 90 bp ACAGGCAGCTTCTCCATGAGGATACACGGCTGGATGGAAATTGACTaGTCATCATCTCTACTGCCCACTATAATCACGATCAAGTGGTCG +
Preference number: 2 (lower is better)
Translates to: TGSFSMRIHGWMEID*SSSLLPTIITIKWS
Trigger: CGACCACTTGATCGTGATTATAGTGGGCAGTAGAGATGATGACAAGTCAATTTCCATCCAGCCGTGTATCCTCATGGAGAAGCTGCCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR-3UTR TCA 90 bp TCACCTTCATTTGAAAGGAACGAGGACATGAACACTCTTGGCTTGTATGACATGGCCAGCTTGCCATCCTaGTTCAGACAGGCAGCTTCT +
Preference number: 2 (lower is better)
Translates to: SPSFERNEDMNTLGLYDMASLPS*FRQAAS
Trigger: AGAAGCTGCCTGTCTGAATCAGGATGGCAAGCTGGC...CATGTCATACAAGCCAAGAGTGTTCATGTCCTCGTTCCTTTCAAATGAAGGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR-3UTR TCA 90 bp AATGACAGATTCTGTCAGGACGGAGTCATTCTGCTCTGTCTGAATGAGGGAGAGCCCCATCCTGAATTCTaGTTGAGAGGGCTTTCTTTG +
Preference number: 2 (lower is better)
Translates to: NDRFCQDGVILLCLNEGEPHPEF*LRGLSL
Trigger: CAAAGAAAGCCCTCTCAATCAGAATTCAGGATGGGG...CTCTCCCTCATTCAGACAGAGCAGAATGACTCCGTCCTGACAGAATCTGTCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
3UTR-3UTR GCA 90 bp TCACCTTCATTTGAAAGGAACGAGGACATGAACACTCTTGGCTTGTATGACATGAACATGATTCCGGGATaGAGCCTGCCTCTGCAACCC +
Preference number: 2 (lower is better)
Translates to: SPSFERNEDMNTLGLYDMNMIPG*SLPLQP
Trigger: GGGTTGCAGAGGCAGGCTGCATCCCGGAATCATGTT...CATGTCATACAAGCCAAGAGTGTTCATGTCCTCGTTCCTTTCAAATGAAGGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR-3UTR GCA 90 bp AATAGTCGCGTTGTTCATCATCATCAGGACTTCCATAAAGAGGCTGCTGAGGGCAGCATAAGATTCTTTTaGCAGGATGATGGACGGCGG +
Preference number: 2 (lower is better)
Translates to: NSRVVHHHQDFHKEAAEGSIRFF*QDDGRR
Trigger: CCGCCGTCCATCATCCTGGCAAAAGAATCTTATGCT...GCCCTCAGCAGCCTCTTTATGGAAGTCCTGATGATGATGAACAACGCGACTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
3UTR-3UTR GCA 90 bp AATGACAGATTCTGTCAGGACGGAGTCATTCTGCTCTGTCTGAATGAGGGAGAGAGCATAAGATTCTTTTaGCAGGATGATGGACGGCGG +
Preference number: 2 (lower is better)
Translates to: NDRFCQDGVILLCLNEGESIRFF*QDDGRR
Trigger: CCGCCGTCCATCATCCTGGCAAAAGAATCTTATGCT...CTCTCCCTCATTCAGACAGAGCAGAATGACTCCGTCCTGACAGAATCTGTCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
3UTR-3UTR GCA 90 bp TTTTGGCCAATCCAGGTCCGGATACTGCCCCGAAGGAACTCTGCTGTTGGAATATTGGCATTTTGGAACTaGATCAAGATGCTTCTGGCT +
Preference number: 2 (lower is better)
Translates to: FWPIQVRILPRRNSAVGILAFWN*IKMLLA
Trigger: AGCCAGAAGCATCTTGATGCAGTTCCAAAATGCCAA...TATTCCAACAGCAGAGTTCCTTCGGGGCAGTATCCGGACCTGGATTGGCCAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
3UTR-3UTR CCA 90 bp TCACCTTCATTTGAAAGGAACGAGGACATGAACACTCTTGGCTTGTATGACATGCAGTCCACAGGGCCTTaGTCTTGCTTGATTCCCGTC +
Preference number: 2 (lower is better)
Translates to: SPSFERNEDMNTLGLYDMQSTGP*SCLIPV
Trigger: GACGGGAATCAAGCAAGACCAAGGCCCTGTGGACTG...CATGTCATACAAGCCAAGAGTGTTCATGTCCTCGTTCCTTTCAAATGAAGGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR-3UTR CCA 90 bp GCCCCGAAGGAACTCTGCTGTTGGAATAGTCGCGTTGTTCATCATCATCAGGACAAGGAACTCTGCTGTTaGAATAGTCGCGTTGTTCAT +
Preference number: 2 (lower is better)
Translates to: APKELCCWNSRVVHHHQDKELCC*NSRVVH
Trigger: ATGAACAACGCGACTATTCCAACAGCAGAGTTCCTT...GTCCTGATGATGATGAACAACGCGACTATTCCAACAGCAGAGTTCCTTCGGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
3UTR-3UTR CCA 90 bp GGTCCGGATACTGCCCCGAAGGAACTCTGCTGTTGGAATAGTCGCGTTGTTCATACTCCAAATGTAGTGTaGTCTGTTCTTCACGATTCA +
Preference number: 2 (lower is better)
Translates to: GPDTAPKELCCWNSRVVHTPNVV*SVLHDS
Trigger: TGAATCGTGAAGAACAGACCACACTACATTTGGAGT...ATGAACAACGCGACTATTCCAACAGCAGAGTTCCTTCGGGGCAGTATCCGGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587884.1
3UTR CAA 90 bp GAGCAAGAAGATGGCCACAGAACAAGGCAAAGTTACACACAGGCTTaGGTAATGAATGAACTGTCAACAACAGAAGGCACGTGGCTATGG +
Preference number: 2 (lower is better)
Translates to: EQEDGHRTRQSYTQA*VMNELSTTEGTWLW
Trigger: CCATAGCCACGTGCCTTCTGTTGTTGACAGTTCATTCATTACCAAAGCCTGTGTGTAACTTTGCCTTGTTCTGTGGCCATCTTCTTGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR CAA 90 bp AATGTAGTGTGGTCTGTTCTTCACGATTCACATACTGCTTTGGCATaGTGTCTAACAGCTCACCATCCAGAGCAACCTGCTGAGATTCCC +
Preference number: 2 (lower is better)
Translates to: NVVWSVLHDSHTALA*CLTAHHPEQPAEIP
Trigger: GGGAATCTCAGCAGGTTGCTCTGGATGGTGAGCTGTTAGACACAATGCCAAAGCAGTATGTGAATCGTGAAGAACAGACCACACTACATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587884.1
3UTR CAA 90 bp ACTCCAAATGTAGTGTGGTCTGTTCTTCACGATTCACATACTGCTTaGGCATTGTGTCTAACAGCTCACCATCCAGAGCAACCTGCTGAG +
Preference number: 2 (lower is better)
Translates to: TPNVVWSVLHDSHTA*ALCLTAHHPEQPAE
Trigger: CTCAGCAGGTTGCTCTGGATGGTGAGCTGTTAGACACAATGCCAAAGCAGTATGTGAATCGTGAAGAACAGACCACACTACATTTGGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587884.1
3UTR-3UTR TCA 90 bp ATGTCTGAACTAGCTCAGTGTCTTTATAGCACGTTCCTAGCCCAGAGTTTCCCACTAGAGCTGATAGAATaGGGAACGTGGGAACAGAAG +
Preference number: 2 (lower is better)
Translates to: MSELAQCLYSTFLAQSFPLELIE*GTWEQK
Trigger: CTTCTGTTCCCACGTTCCTCATTCTATCAGCTCTAG...TGGGAAACTCTGGGCTAGGAACGTGCTATAAAGACACTGAGCTAGTTCAGACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR-3UTR TCA 90 bp CTCCGCGGAGCTTTGCATAAGCAGCCTGAGAATGTCACTGTACTGGTCAGGAAAGTTTGGTCTACCAGTTaGACTTCCTTTGCCAATAAA +
Preference number: 2 (lower is better)
Translates to: LRGALHKQPENVTVLVRKVWSTS*TSFANK
Trigger: TTTATTGGCAAAGGAAGTTCAACTGGTAGACCAAAC...TTTCCTGACCAGTACAGTGACATTCTCAGGCTGCTTATGCAAAGCTCCGCGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000590884.5
3UTR-3UTR TCA 90 bp ACCACAAAAACAGCTTTGCCTCTTCCTCCACGGAGCTTGGGTACACCTGTTCCAGTTTGGTCTACCAGTTaGACTTCCTTTGCCAATAAA +
Preference number: 2 (lower is better)
Translates to: TTKTALPLPPRSLGTPVPVWSTS*TSFANK
Trigger: TTTATTGGCAAAGGAAGTTCAACTGGTAGACCAAAC...TGGAACAGGTGTACCCAAGCTCCGTGGAGGAAGAGGCAAAGCTGTTTTTGTGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
3UTR-3UTR GCA 90 bp AATAGTCGCGTTGTTCATCATCATCAGGACTTCCATAAAGAGGCTGCTGAGGGCTATGAACTCTGCAGGTaGAGCATTGGGAGTGAAGAA +
Preference number: 2 (lower is better)
Translates to: NSRVVHHHQDFHKEAAEGYELCR*SIGSEE
Trigger: TTCTTCACTCCCAATGCTGCACCTGCAGAGTTCATA...GCCCTCAGCAGCCTCTTTATGGAAGTCCTGATGATGATGAACAACGCGACTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587884.1
3UTR-3UTR GCA 90 bp ACCACAAAAACAGCTTTGCCTCTTCCTCCACGGAGCTTGGGTACACCTGTTCCAAGAAACTTCACCACTTaGTCATACAGCTGTATGAAC +
Preference number: 2 (lower is better)
Translates to: TTKTALPLPPRSLGTPVPRNFTT*SYSCMN
Trigger: GTTCATACAGCTGTATGAGCAAGTGGTGAAGTTTCT...TGGAACAGGTGTACCCAAGCTCCGTGGAGGAAGAGGCAAAGCTGTTTTTGTGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587884.1
3UTR-3UTR CCA 90 bp GTCCCGAGTGTGCAGGAAGGAGCTTTGGAAACATGTACAGGTGGGTCCCGAATCATAATCACGATCAAGTaGTCGTATTTTACACATGAC +
Preference number: 2 (lower is better)
Translates to: VPSVQEGALETCTGGSRIIITIK*SYFTHD
Trigger: GTCATGTGTAAAATACGACCACTTGATCGTGATTAT...GATTCGGGACCCACCTGTACATGTTTCCAAAGCTCCTTCCTGCACACTCGGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR-3UTR CCA 90 bp GTAAAGAGTCAAGTAACTGCCCAAGGTGAGGCACTCCTGCAGGAACTCTTCCATGCATCAAGATGCTTCTaGCTGTCAGTAGGAATAGAA +
Preference number: 2 (lower is better)
Translates to: VKSQVTAQGEALLQELFHASRCF*LSVGIE
Trigger: TTCTATTCCTACTGACAGCCAGAAGCATCTTGATGC...ATGGAAGAGTTCCTGCAGGAGTGCCTCACCTTGGGCAGTTACTTGACTCTTTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
3UTR-3UTR TCA 90 bp CATTCGGCAACTGTGAGTGGCTCTGCACCCAAGTGGAACTTAGTAAGTTTCTCTGCTCTACAGTGCAATTaGGCAAAGTTACTTGTGCAA +
Preference number: 2 (lower is better)
Translates to: HSATVSGSAPKWNLVSFSALQCN*AKLLVQ
Trigger: TTGCACAAGTAACTTTGCTCAATTGCACTGTAGAGC...AGAGAAACTTACTAAGTTCCACTTGGGTGCAGAGCCACTCACAGTTGCCGAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR-3UTR TCA 90 bp GTCCCGAATCCACTGCTACTGTCATGCTATGTAGACAGTTGTGTAGACACATCTAGTAAGGGTACTGAGTaGCTTCCAAGGTTGTCAGAT +
Preference number: 2 (lower is better)
Translates to: VPNPLLLSCYVDSCVDTSSKGTE*LPRLSD
Trigger: ATCTGACAACCTTGGAAGTCACTCAGTACCCTTACT...AGATGTGTCTACACAACTGTCTACATAGCATGACAGTAGCAGTGGATTCGGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR-3UTR TCA 90 bp CACCTGCAAGCAAGCACCAACTTAAATGTATGCCCCAGGTGCCTCATTTGTCTCAGGAAGCGCTTTCACTaGCCATCTCTGATTATTAAT +
Preference number: 2 (lower is better)
Translates to: HLQASTNLNVCPRCLICLRKRFH*PSLIIN
Trigger: ATTAATAATCAGAGATGGTCAGTGAAAGCGCTTCCT...GAGACAAATGAGGCACCTGGGGCATACATTTAAGTTGGTGCTTGCTTGCAGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR-3UTR TCA 90 bp GCCCCGAAGGAACTCTGCTGTTGGAATAGTCGCGTTGTTCATCATCATCAGGACCCAATAAAATCATCATaGAAAGGAGGCAGACAATCA +
Preference number: 2 (lower is better)
Translates to: APKELCCWNSRVVHHHQDPIKSS*KGGRQS
Trigger: TGATTGTCTGCCTCCTTTTCATGATGATTTTATTGG...GTCCTGATGATGATGAACAACGCGACTATTCCAACAGCAGAGTTCCTTCGGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
3UTR-3UTR TCA 90 bp AGTGTTAGAAAGGCGCTTCCTTACCTGTTAGACAAAGGCGACTTCCGGCCAAACCTAGGACTGCTAAGGTaGTTTTTCCATTTTGTTCCA +
Preference number: 2 (lower is better)
Translates to: SVRKALPYLLDKGDFRPNLGLLR*FFHFVP
Trigger: TGGAACAAAATGGAAAAATCACCTTAGCAGTCCTAG...GTTTGGCCGGAAGTCGCCTTTGTCTAACAGGTAAGGAAGCGCCTTTCTAACACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
3UTR-3UTR GCA 90 bp AATTTCAGTAGATCTCCCGACCTGACCCAGTTTCCACAGACAAGTGTTTCAGCAGTGTCTATCAAAGGGTaGAAACTTAGGTGTCGACAG +
Preference number: 2 (lower is better)
Translates to: NFSRSPDLTQFPQTSVSAVSIKG*KLRCRQ
Trigger: CTGTCGACACCTAAGTTTGCACCCTTTGATAGACAC...TGCTGAAACACTTGTCTGTGGAAACTGGGTCAGGTCGGGAGATCTACTGAAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR-3UTR GCA 90 bp AAGGCTAATGCCAACTTTCTGAATCCCAGGTGTAGGCTGCAACTTGTAGGCATTTTAGCAGCTTCTGCTTaGAACTGCTTCACTTCCTTC +
Preference number: 2 (lower is better)
Translates to: KANANFLNPRCRLQLVGILAASA*NCFTSF
Trigger: GAAGGAAGTGAAGCAGTTGCAAGCAGAAGCTGCTAA...AATGCCTACAAGTTGCAGCCTACACCTGGGATTCAGAAAGTTGGCATTAGCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587884.1
3UTR-3UTR CCA 90 bp ATTAATAGGCAGTGGGACAACATGATTCCGGGATGCAGCCTGCCTCTGCAACCCCCCTATAAACATTCTTaGTGGCTGTTTAGACATTTT +
Preference number: 2 (lower is better)
Translates to: INRQWDNMIPGCSLPLQPPYKHS*WLFRHF
Trigger: AAAATGTCTAAACAGCCACCAAGAATGTTTATAGGG...GGGTTGCAGAGGCAGGCTGCATCCCGGAATCATGTTGTCCCACTGCCTATTAAT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR-3UTR CCA 90 bp GAGGAATTGAACCATCTGATGAGTAAAAGCTTGGCATTTTGGAACTGCATCAAGTTTCCTGCTGGCAGTTaGGTCTTGGGCCAAACAGGT +
Preference number: 2 (lower is better)
Translates to: EELNHLMSKSLAFWNCIKFPAGS*VLGQTG
Trigger: ACCTGTTTGGCCCAAGACCCAACTGCCAGCAGGAAA...CTTGATGCAGTTCCAAAATGCCAAGCTTTTACTCATCAGATGGTTCAATTCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000590884.5
3UTR-3UTR CCA 90 bp TCCTTAAAGTCTGTTCGCTGTTTAAACACTGAAGCAAGTAGACGTAAAGAGTCAGCACTGTTTTCCTGCTaGCAGTTGGGTCTTGGGCCA +
Preference number: 2 (lower is better)
Translates to: SLKSVRCLNTEASRRKESALFSC*QLGLGP
Trigger: TGGCCCAAGACCCAACTGCCAGCAGGAAAACAGTGC...TGACTCTTTACGTCTACTTGCTTCAGTGTTTAAACAGCGAACAGACTTTAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000590884.5
3UTR-3UTR CCA 90 bp TCCTTAAAGTCTGTTCGCTGTTTAAACACTGAAGCAAGTAGACGTAAAGAGTCACATGCTGCGGGTTTCTaGGTGGGGACTGGAATTCCA +
Preference number: 2 (lower is better)
Translates to: SLKSVRCLNTEASRRKESHAAGF*VGTGIP
Trigger: TGGAATTCCAGTCCCCACCCAGAAACCCGCAGCATG...TGACTCTTTACGTCTACTTGCTTCAGTGTTTAAACAGCGAACAGACTTTAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
3UTR-3UTR TCA 90 bp ACAGATCCCTCTGAGACGGACATTTTGTGGCCTGTAAAACTCAAGAGACTAAACAGTAAGGGTACTGAGTaGCTTCCAAGGTTGTCAGAT +
Preference number: 2 (lower is better)
Translates to: TDPSETDILWPVKLKRLNSKGTE*LPRLSD
Trigger: ATCTGACAACCTTGGAAGTCACTCAGTACCCTTACT...GTTTAGTCTCTTGAGTTTTACAGGCCACAAAATGTCCGTCTCAGAGGGATCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR-3UTR TCA 90 bp ATGTCTGAACTAGCTCAGTGTCTTTATAGCACGTTCCTAGCCCAGAGTTTCCCATTCCAAAAGGACATTTaGGGAGAGATTAGCACTCTG +
Preference number: 2 (lower is better)
Translates to: MSELAQCLYSTFLAQSFPFQKDI*GEISTL
Trigger: CAGAGTGCTAATCTCTCCTCAAATGTCCTTTTGGAA...TGGGAAACTCTGGGCTAGGAACGTGCTATAAAGACACTGAGCTAGTTCAGACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR-3UTR TCA 90 bp AGTGTTAGAAAGGCGCTTCCTTACCTGTTAGACAAAGGCGACTTCCGGCCAAACCCAATAAAATCATCATaGAAAGGAGGCAGACAATCA +
Preference number: 2 (lower is better)
Translates to: SVRKALPYLLDKGDFRPNPIKSS*KGGRQS
Trigger: TGATTGTCTGCCTCCTTTTCATGATGATTTTATTGG...GTTTGGCCGGAAGTCGCCTTTGTCTAACAGGTAAGGAAGCGCCTTTCTAACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
3UTR-3UTR TCA 90 bp TCGGGCGGGTTAAAGACAATGATATCGTCTAAGAGCTTAGACATTTCCTGTTCTGCGGGTAATGGCTGCTaGAATAACTTAGCACACTCT +
Preference number: 2 (lower is better)
Translates to: SGGLKTMISSKSLDISCSAGNGC*NNLAHS
Trigger: AGAGTGTGCTAAGTTATTTCAGCAGCCATTACCCGC...AGAACAGGAAATGTCTAAGCTCTTAGACGATATCATTGTCTTTAACCCGCCCGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
3UTR-3UTR GCA 90 bp GAGGAATTGAACCATCTGATGAGTAAAAGCTTGGCATTTTGGAACTGCATCAAGGGCTGGGGAGCCTCATaGTTCCGCAAGTTACTTAAA +
Preference number: 2 (lower is better)
Translates to: EELNHLMSKSLAFWNCIKGWGAS*FRKLLK
Trigger: TTTAAGTAACTTGCGGAAGCATGAGGCTCCCCAGCC...CTTGATGCAGTTCCAAAATGCCAAGCTTTTACTCATCAGATGGTTCAATTCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000587884.1
3UTR-3UTR CCA 90 bp CACCTGCAAGCAAGCACCAACTTAAATGTATGCCCCAGGTGCCTCATTTGTCTCAAACATAAACAGCAATaGGTTTTTCAAGAGCCTCAG +
Preference number: 2 (lower is better)
Translates to: HLQASTNLNVCPRCLICLKHKQQ*VFQEPQ
Trigger: CTGAGGCTCTTGAAAAACCCATTGCTGTTTATGTTT...GAGACAAATGAGGCACCTGGGGCATACATTTAAGTTGGTGCTTGCTTGCAGGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR-3UTR CCA 90 bp AATTTCAGTAGATCTCCCGACCTGACCCAGTTTCCACAGACAAGTGTTTCAGCAGGATACACGGCTGGATaGAAATTGACTTGTCATCAT +
Preference number: 2 (lower is better)
Translates to: NFSRSPDLTQFPQTSVSAGYTAG*KLTCHH
Trigger: ATGATGACAAGTCAATTTCCATCCAGCCGTGTATCC...TGCTGAAACACTTGTCTGTGGAAACTGGGTCAGGTCGGGAGATCTACTGAAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR-3UTR CCA 90 bp GTCCCGAATCCACTGCTACTGTCATGCTATGTAGACAGTTGTGTAGACACATCTATGAGGATACACGGCTaGATGGAAATTGACTTGTCA +
Preference number: 2 (lower is better)
Translates to: VPNPLLLSCYVDSCVDTSMRIHG*MEIDLS
Trigger: TGACAAGTCAATTTCCATCCAGCCGTGTATCCTCAT...AGATGTGTCTACACAACTGTCTACATAGCATGACAGTAGCAGTGGATTCGGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR-3UTR CCA 90 bp ATGTCTGAACTAGCTCAGTGTCTTTATAGCACGTTCCTAGCCCAGAGTTTCCCAATGAGGATACACGGCTaGATGGAAATTGACTTGTCA +
Preference number: 2 (lower is better)
Translates to: MSELAQCLYSTFLAQSFPMRIHG*MEIDLS
Trigger: TGACAAGTCAATTTCCATCCAGCCGTGTATCCTCAT...TGGGAAACTCTGGGCTAGGAACGTGCTATAAAGACACTGAGCTAGTTCAGACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR-3UTR CCA 90 bp ATGTCTGAACTAGCTCAGTGTCTTTATAGCACGTTCCTAGCCCAGAGTTTCCCAGAGACGGACATTTTGTaGCCTGTAAAACTCAAGAGA +
Preference number: 2 (lower is better)
Translates to: MSELAQCLYSTFLAQSFPETDIL*PVKLKR
Trigger: TCTCTTGAGTTTTACAGGCCACAAAATGTCCGTCTC...TGGGAAACTCTGGGCTAGGAACGTGCTATAAAGACACTGAGCTAGTTCAGACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR-3UTR TCA 90 bp GCTGTTGGAATAGTCGCGTTGTTCATCATCATCAGGACTTCCATAAAGAGGCTGCATGGCTTAAAGAGCTaGATGATTACTGAATGTAGG +
Preference number: 2 (lower is better)
Translates to: AVGIVALFIIIRTSIKRLHGLKS*MITECR
Trigger: CCTACATTCAGTAATCATTCAGCTCTTTAAGCCATG...CAGCCTCTTTATGGAAGTCCTGATGATGATGAACAACGCGACTATTCCAACAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000590884.5
3UTR-3UTR GCA 90 bp CTTTCATTTCATTCCTTAAAGTCTGTTCGCTGTTTAAACACTGAAGCAAGTAGAACAGATTCAGGTCTGTaGACACCAGCTGGGTGGCGT +
Preference number: 2 (lower is better)
Translates to: LSFHSLKSVRCLNTEASRTDSGL*TPAGWR
Trigger: ACGCCACCCAGCTGGTGTGCACAGACCTGAATCTGT...TCTACTTGCTTCAGTGTTTAAACAGCGAACAGACTTTAAGGAATGAAATGAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587884.1
3UTR-3UTR CCA 90 bp CATTCGGCAACTGTGAGTGGCTCTGCACCCAAGTGGAACTTAGTAAGTTTCTCTAAACATAAACAGCAATaGGTTTTTCAAGAGCCTCAG +
Preference number: 2 (lower is better)
Translates to: HSATVSGSAPKWNLVSFSKHKQQ*VFQEPQ
Trigger: CTGAGGCTCTTGAAAAACCCATTGCTGTTTATGTTT...AGAGAAACTTACTAAGTTCCACTTGGGTGCAGAGCCACTCACAGTTGCCGAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR-3UTR CCA 90 bp ACAGATCCCTCTGAGACGGACATTTTGTGGCCTGTAAAACTCAAGAGACTAAACACAAAGAACTCCATCTaGAGGTCTTGTGAGATGACT +
Preference number: 2 (lower is better)
Translates to: TDPSETDILWPVKLKRLNTKNSI*RSCEMT
Trigger: AGTCATCTCACAAGACCTCCAGATGGAGTTCTTTGT...GTTTAGTCTCTTGAGTTTTACAGGCCACAAAATGTCCGTCTCAGAGGGATCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR-3UTR CCA 90 bp AATTTCAGTAGATCTCCCGACCTGACCCAGTTTCCACAGACAAGTGTTTCAGCATTCAGATATCGAACATaGTGTCTATCAAAGGGTGCA +
Preference number: 2 (lower is better)
Translates to: NFSRSPDLTQFPQTSVSAFRYRT*CLSKGA
Trigger: TGCACCCTTTGATAGACACCATGTTCGATATCTGAA...TGCTGAAACACTTGTCTGTGGAAACTGGGTCAGGTCGGGAGATCTACTGAAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR-3UTR CCA 90 bp TTAATGCCACTGATAAATACCTGTCCCAAGATCTCAATACATGAAGTAAAGAACGCACTGTTTTCCTGCTaGCAGTTGGGTCTTGGGCCA +
Preference number: 2 (lower is better)
Translates to: LMPLINTCPKISIHEVKNALFSC*QLGLGP
Trigger: TGGCCCAAGACCCAACTGCCAGCAGGAAAACAGTGC...GTTCTTTACTTCATGTATTGAGATCTTGGGACAGGTATTTATCAGTGGCATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587884.1
3UTR-3UTR TCA 90 bp ACAGATCCCTCTGAGACGGACATTTTGTGGCCTGTAAAACTCAAGAGACTAAACGTCGTATTTTACACATaGCCCACTTTAACTAACTCG +
Preference number: 2 (lower is better)
Translates to: TDPSETDILWPVKLKRLNVVFYT*PTLTNS
Trigger: CGAGTTAGTTAAAGTGGGTCATGTGTAAAATACGAC...GTTTAGTCTCTTGAGTTTTACAGGCCACAAAATGTCCGTCTCAGAGGGATCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR-3UTR GCA 90 bp GTAGGAATAGAAAGGCCCGCAGACACTTTTAGGAGCTTCATGATTAATTCAGCAATAGTCTCCATTACCTaGTTGTCTGACAAGAGAGCA +
Preference number: 2 (lower is better)
Translates to: VGIERPADTFRSFMINSAIVSIT*LSDKRA
Trigger: TGCTCTCTTGTCAGACAAGCAGGTAATGGAGACTAT...TGCTGAATTAATCATGAAGCTCCTAAAAGTGTCTGCGGGCCTTTCTATTCCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000590884.5
3UTR-3UTR CCA 90 bp ATGTCTGAACTAGCTCAGTGTCTTTATAGCACGTTCCTAGCCCAGAGTTTCCCATTGGAGGAACACAAATaGGGTTTAAAAGTAAGGGTA +
Preference number: 2 (lower is better)
Translates to: MSELAQCLYSTFLAQSFPLEEHK*GLKVRV
Trigger: TACCCTTACTTTTAAACCCCATTTGTGTTCCTCCAA...TGGGAAACTCTGGGCTAGGAACGTGCTATAAAGACACTGAGCTAGTTCAGACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR-3UTR CCA 90 bp TCACCTTCATTTGAAAGGAACGAGGACATGAACACTCTTGGCTTGTATGACATGGGATACACGGCTGGATaGAAATTGACTTGTCATCAT +
Preference number: 2 (lower is better)
Translates to: SPSFERNEDMNTLGLYDMGYTAG*KLTCHH
Trigger: ATGATGACAAGTCAATTTCCATCCAGCCGTGTATCC...CATGTCATACAAGCCAAGAGTGTTCATGTCCTCGTTCCTTTCAAATGAAGGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR-3UTR CCA 90 bp TCACCTTCATTTGAAAGGAACGAGGACATGAACACTCTTGGCTTGTATGACATGGAGACGGACATTTTGTaGCCTGTAAAACTCAAGAGA +
Preference number: 2 (lower is better)
Translates to: SPSFERNEDMNTLGLYDMETDIL*PVKLKR
Trigger: TCTCTTGAGTTTTACAGGCCACAAAATGTCCGTCTC...CATGTCATACAAGCCAAGAGTGTTCATGTCCTCGTTCCTTTCAAATGAAGGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR-3UTR GCA 90 bp ACAGATCCCTCTGAGACGGACATTTTGTGGCCTGTAAAACTCAAGAGACTAAACATATTAAGCCAGCTATaGAGGCAAAATCCATCTAGA +
Preference number: 2 (lower is better)
Translates to: TDPSETDILWPVKLKRLNILSQL*RQNPSR
Trigger: TCTAGATGGATTTTGCCTGCATAGCTGGCTTAATAT...GTTTAGTCTCTTGAGTTTTACAGGCCACAAAATGTCCGTCTCAGAGGGATCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR-3UTR GCA 90 bp ATGACGCTGCGTCTCATCGCTGACGTAATCCACAATAGTAAAGAAAAGGCTAATTCACGATTCACATACTaGTTTGGCATTGTGTCTAAC +
Preference number: 2 (lower is better)
Translates to: MTLRLIADVIHNSKEKANSRFTY*FGIVSN
Trigger: GTTAGACACAATGCCAAAGCAGTATGTGAATCGTGA...ATTAGCCTTTTCTTTACTATTGTGGATTACGTCAGCGATGAGACGCAGCGTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587884.1
3UTR-3UTR CCA 90 bp CTTTCATTTCATTCCTTAAAGTCTGTTCGCTGTTTAAACACTGAAGCAAGTAGACTGGCAGTTGGGTCTTaGGCCAAACAGGTCATTTCT +
Preference number: 2 (lower is better)
Translates to: LSFHSLKSVRCLNTEASRLAVGS*AKQVIS
Trigger: AGAAATGACCTGTTTGGCCCAAGACCCAACTGCCAG...TCTACTTGCTTCAGTGTTTAAACAGCGAACAGACTTTAAGGAATGAAATGAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000590884.5
3UTR-3UTR GCA 90 bp TCCTTAAAGTCTGTTCGCTGTTTAAACACTGAAGCAAGTAGACGTAAAGAGTCATTGGCATTTTGGAACTaGATCAAGATGCTTCTGGCT +
Preference number: 2 (lower is better)
Translates to: SLKSVRCLNTEASRRKESLAFWN*IKMLLA
Trigger: AGCCAGAAGCATCTTGATGCAGTTCCAAAATGCCAA...TGACTCTTTACGTCTACTTGCTTCAGTGTTTAAACAGCGAACAGACTTTAAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
3UTR CAA 90 bp TGTTTAAGATCGAACTTGGTTAGCAGCATGAAAATCATATCACTGTaGTCCTCACTTAGAAACTTCACCACTTGCTCATACAGCTGTATG +
Preference number: 2 (lower is better)
Translates to: CLRSNLVSSMKIISL*SSLRNFTTCSYSCM
Trigger: CATACAGCTGTATGAGCAAGTGGTGAAGTTTCTAAGTGAGGACAACAGTGATATGATTTTCATGCTGCTAACCAAGTTCGATCTTAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587884.1
3UTR-3UTR TCA 90 bp TCCTTAAAGTCTGTTCGCTGTTTAAACACTGAAGCAAGTAGACGTAAAGAGTCACATGGCTTAAAGAGCTaGATGATTACTGAATGTAGG +
Preference number: 2 (lower is better)
Translates to: SLKSVRCLNTEASRRKESHGLKS*MITECR
Trigger: CCTACATTCAGTAATCATTCAGCTCTTTAAGCCATG...TGACTCTTTACGTCTACTTGCTTCAGTGTTTAAACAGCGAACAGACTTTAAGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000590884.5
3UTR-3UTR CCA 90 bp TCACCTTCATTTGAAAGGAACGAGGACATGAACACTCTTGGCTTGTATGACATGCAAGGTTGTCAGATCTaGAACATTTACATAAAACAG +
Preference number: 2 (lower is better)
Translates to: SPSFERNEDMNTLGLYDMQGCQI*NIYIKQ
Trigger: CTGTTTTATGTAAATGTTCCAGATCTGACAACCTTG...CATGTCATACAAGCCAAGAGTGTTCATGTCCTCGTTCCTTTCAAATGAAGGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR-3UTR TCA 90 bp TCCTTAAAGTCTGTTCGCTGTTTAAACACTGAAGCAAGTAGACGTAAAGAGTCACCAATAAAATCATCATaGAAAGGAGGCAGACAATCA +
Preference number: 2 (lower is better)
Translates to: SLKSVRCLNTEASRRKESPIKSS*KGGRQS
Trigger: TGATTGTCTGCCTCCTTTTCATGATGATTTTATTGG...TGACTCTTTACGTCTACTTGCTTCAGTGTTTAAACAGCGAACAGACTTTAAGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
3UTR CCA 72 bp TCCCGATGCCACTGTTGGCCACCCTGTGGTGAAGTCTaGAGCCTGCAGCCGTTCGCCCTCCACGCTGCTCAG +
Preference number: 3 (lower is better)
Translates to: SRCHCWPPCGEV*SLQPFALHAAQ
Trigger: CTGAGCAGCGTGGAGGGCGAACGGCTGCAGGCTCCAGACTTCACCACAGGGTGGCCAACAGTGGCATCGGGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR-3UTR CAA 90 bp CAGCCTAGGCCTGCCCATCACAGGCTGGACCACCAGGCACTGGACAGGGGCAGAGAAATGAGTCACGCCTaGGAGCTGAGGTCCCGAGTG +
Preference number: 3 (lower is better)
Translates to: QPRPAHHRLDHQALDRGREMSHA*ELRSRV
Trigger: CACTCGGGACCTCAGCTCCAAGGCGTGACTCATTTC...TCTGCCCCTGTCCAGTGCCTGGTGGTCCAGCCTGTGATGGGCAGGCCTAGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR CCA 72 bp CCAAGGCTCATTACCCCTGCAAGCCAACAGGCGGGCTaGTCTCTCTGCCGCCCTTCTTTCCCAGGAGGCTAC +
Preference number: 3 (lower is better)
Translates to: PRLITPASQQAG*SLCRPSFPGGY
Trigger: GTAGCCTCCTGGGAAAGAAGGGCGGCAGAGAGACCAGCCCGCCTGTTGGCTTGCAGGGGTAATGAGCCTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR CCA 72 bp CCGTTCGCCCTCCACGCTGCTCAGTCCACAGGGCCTTaGTCTTGCTTGATTCCCGTCTTGATGTGCGGCACC +
Preference number: 3 (lower is better)
Translates to: PFALHAAQSTGP*SCLIPVLMCGT
Trigger: GGTGCCGCACATCAAGACGGGAATCAAGCAAGACCAAGGCCCTGTGGACTGAGCAGCGTGGAGGGCGAACGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR-3UTR CAA 90 bp CAGCCTAGGCCTGCCCATCACAGGCTGGACCACCAGGCACTGGACAGGGGCAGAGTGCAGGAAGGAGCTTaGGAAACATGTACAGGTGGG +
Preference number: 3 (lower is better)
Translates to: QPRPAHHRLDHQALDRGRVQEGA*ETCTGG
Trigger: CCCACCTGTACATGTTTCCAAAGCTCCTTCCTGCAC...TCTGCCCCTGTCCAGTGCCTGGTGGTCCAGCCTGTGATGGGCAGGCCTAGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR TCA 72 bp TCCGGCCAAACCCAATTGCCCCCAGGATCCCAGAGCTaGGTCTCTCCTCAGCCACGAGGTTCTGCCTGCTCT +
Preference number: 3 (lower is better)
Translates to: SGQTQLPPGSQS*VSPQPRGSACS
Trigger: AGAGCAGGCAGAACCTCGTGGCTGAGGAGAGACTCAGCTCTGGGATCCTGGGGGCAATTGGGTTTGGCCGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
3UTR GCA 72 bp ATTACCCCTGCAAGCCAACAGGCGGGCTGGTCTCTCTaGCGCCCTTCTTTCCCAGGAGGCTACAGCAGCATG +
Preference number: 3 (lower is better)
Translates to: ITPASQQAGWSL*RPSFPGGYSSM
Trigger: CATGCTGCTGTAGCCTCCTGGGAAAGAAGGGCGGCAGAGAGACCAGCCCGCCTGTTGGCTTGCAGGGGTAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR-3UTR CAA 90 bp AGCAGCCCAGGGCTCTCAGAGTGGCCTTCCAACACTCGGGGCTCAGAAGCTGCTTTTTCCTGCTGGCAGTaGGGTCTTGGGCCAAACAGG +
Preference number: 3 (lower is better)
Translates to: SSPGLSEWPSNTRGSEAAFSCWQ*GLGPNR
Trigger: CCTGTTTGGCCCAAGACCCAACTGCCAGCAGGAAAA...AGCAGCTTCTGAGCCCCGAGTGTTGGAAGGCCACTCTGAGAGCCCTGGGCTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000590884.5
3UTR-3UTR CAA 90 bp CAGCCTAGGCCTGCCCATCACAGGCTGGACCACCAGGCACTGGACAGGGGCAGATCTGAGACGGACATTTaGTGGCCTGTAAAACTCAAG +
Preference number: 3 (lower is better)
Translates to: QPRPAHHRLDHQALDRGRSETDI*WPVKLK
Trigger: CTTGAGTTTTACAGGCCACAAAATGTCCGTCTCAGA...TCTGCCCCTGTCCAGTGCCTGGTGGTCCAGCCTGTGATGGGCAGGCCTAGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR GCA 72 bp CTCAGAGTGGCCTTCCAACACTCGGGGCTCAGAAGCTaGTCCGCGGAGCTTTGCATAAGCAGCCTGAGAATG +
Preference number: 3 (lower is better)
Translates to: LRVAFQHSGLRS*SAELCISSLRM
Trigger: CATTCTCAGGCTGCTTATGCAAAGCTCCGCGGAGCAGCTTCTGAGCCCCGAGTGTTGGAAGGCCACTCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000590884.5
3UTR-3UTR CAA 90 bp GCGGGTTTCTGGGTGGGGACTGGAATTCCAGGCATCAGAGAGCACACTAACCCACTGCTCCGCGGAGCTTaGCATAAGCAGCCTGAGAAT +
Preference number: 3 (lower is better)
Translates to: AGFWVGTGIPGIREHTNPLLRGA*HKQPEN
Trigger: ATTCTCAGGCTGCTTATGCAAAGCTCCGCGGAGCAG...TGGGTTAGTGTGCTCTCTGATGCCTGGAATTCCAGTCCCCACCCAGAAACCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000590884.5
3UTR-3UTR CAA 90 bp TTAGACAAAGGCGACTTCCGGCCAAACCCAATTGCCCCCAGGATCCCAGAGCTGGCTGGCAGTTGGGTCTaGGGCCAAACAGGTCATTTC +
Preference number: 3 (lower is better)
Translates to: LDKGDFRPNPIAPRIPELAGSWV*GQTGHF
Trigger: GAAATGACCTGTTTGGCCCAAGACCCAACTGCCAGC...CAGCTCTGGGATCCTGGGGGCAATTGGGTTTGGCCGGAAGTCGCCTTTGTCTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000590884.5
3UTR-3UTR CAA 90 bp GACTTCCGGCCAAACCCAATTGCCCCCAGGATCCCAGAGCTGAGTCTCTCCTCAGGAGAGCTGAAGGACTaGGTGCCACCACAAAAACAG +
Preference number: 3 (lower is better)
Translates to: DFRPNPIAPRIPELSLSSGELKD*VPPQKQ
Trigger: CTGTTTTTGTGGTGGCACCAAGTCCTTCAGCTCTCC...TGAGGAGAGACTCAGCTCTGGGATCCTGGGGGCAATTGGGTTTGGCCGGAAGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
3UTR-3UTR CAA 90 bp GACTTCCGGCCAAACCCAATTGCCCCCAGGATCCCAGAGCTGAGTCTCTCCTCAACCTGTTCCAGCCACTaGCTTAAGATGAGCAGCACT +
Preference number: 3 (lower is better)
Translates to: DFRPNPIAPRIPELSLSSTCSSH*LKMSST
Trigger: AGTGCTGCTCATCTTAAGCAAGTGGCTGGAACAGGT...TGAGGAGAGACTCAGCTCTGGGATCCTGGGGGCAATTGGGTTTGGCCGGAAGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
3UTR GCA 72 bp CGGTTCTGGCCTGCTGTTGCAACAGATTCAGGTCTGTaGACACCAGCTGGGTGGCGTCCTTCTGACTCAATA +
Preference number: 3 (lower is better)
Translates to: RFWPAVATDSGL*TPAGWRPSDSI
Trigger: TATTGAGTCAGAAGGACGCCACCCAGCTGGTGTGCACAGACCTGAATCTGTTGCAACAGCAGGCCAGAACCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587884.1
3UTR CCA 72 bp CTGTTAGACATCTTTATTTGGTCCCGATGCCACTGTTaGCCACCCTGTGGTGAAGTCTGGAGCCTGCAGCCG +
Preference number: 3 (lower is better)
Translates to: LLDIFIWSRCHC*PPCGEVWSLQP
Trigger: CGGCTGCAGGCTCCAGACTTCACCACAGGGTGGCCAACAGTGGCATCGGGACCAAATAAAGATGTCTAACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR CCA 72 bp CTCCATGAGCATCTGGTCAGGGTGCAGGTCCTTCCATaGCAGTTTCCGGTACGTGCTATGGAAAGCGTACAG +
Preference number: 3 (lower is better)
Translates to: LHEHLVRVQVLP*QFPVRAMESVQ
Trigger: CTGTACGCTTTCCATAGCACGTACCGGAAACTGCCATGGAAGGACCTGCACCCTGACCAGATGCTCATGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000592272.5
3UTR-3UTR CAA 90 bp ATTAATAGGCAGTGGGACAACATGATTCCGGGATGCAGCCTGCCTCTGCAACCCTCAGTCCACAGGGCCTaGGTCTTGCTTGATTCCCGT +
Preference number: 3 (lower is better)
Translates to: INRQWDNMIPGCSLPLQPSVHRA*VLLDSR
Trigger: ACGGGAATCAAGCAAGACCAAGGCCCTGTGGACTGA...GGGTTGCAGAGGCAGGCTGCATCCCGGAATCATGTTGTCCCACTGCCTATTAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR-3UTR CAA 90 bp CAACACTCGGGGCTCAGAAGCTGCTCCGCGGAGCTTTGCATAAGCAGCCTGAGAGTCTCCATTACCTGCTaGTCTGACAAGAGAGCATCA +
Preference number: 3 (lower is better)
Translates to: QHSGLRSCSAELCISSLRVSITC*SDKRAS
Trigger: TGATGCTCTCTTGTCAGACAAGCAGGTAATGGAGAC...TCTCAGGCTGCTTATGCAAAGCTCCGCGGAGCAGCTTCTGAGCCCCGAGTGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000590884.5
3UTR-3UTR CAA 90 bp TTAGACAAAGGCGACTTCCGGCCAAACCCAATTGCCCCCAGGATCCCAGAGCTGAATAAGAAACAGCTCTaGGGGCTTCCTCGTTCCACC +
Preference number: 3 (lower is better)
Translates to: LDKGDFRPNPIAPRIPELNKKQL*GLPRST
Trigger: GGTGGAACGAGGAAGCCCCAAGAGCTGTTTCTTATT...CAGCTCTGGGATCCTGGGGGCAATTGGGTTTGGCCGGAAGTCGCCTTTGTCTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590884.5
3UTR GCA 72 bp TCTATTAATAGGCAGTGGGACAACATGATTCCGGGATaGAGCCTGCCTCTGCAACCCACCTGTGCACTGCAG +
Preference number: 3 (lower is better)
Translates to: SINRQWDNMIPG*SLPLQPTCALQ
Trigger: CTGCAGTGCACAGGTGGGTTGCAGAGGCAGGCTGCATCCCGGAATCATGTTGTCCCACTGCCTATTAATAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR GCA 72 bp GAAATGAGTCACGCCTTGGAGCTGAGGTCCCGAGTGTaGAGGAAGGAGCTTTGGAAACATGTACAGGTGGGT +
Preference number: 3 (lower is better)
Translates to: EMSHALELRSRV*RKELWKHVQVG
Trigger: ACCCACCTGTACATGTTTCCAAAGCTCCTTCCTGCACACTCGGGACCTCAGCTCCAAGGCGTGACTCATTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR GCA 72 bp CTGCAAGCAAGCACCAACTTAAATGTATGCCCCAGGTaGCTCATTTGTCTCACCCTAGCCCTGGCCCTGCTA +
Preference number: 3 (lower is better)
Translates to: LQASTNLNVCPR*LICLTLALALL
Trigger: TAGCAGGGCCAGGGCTAGGGTGAGACAAATGAGGCACCTGGGGCATACATTTAAGTTGGTGCTTGCTTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR GCA 72 bp ACTTTGAAGAAGGCCTCCATGAGCATCTGGTCAGGGTaGAGGTCCTTCCATGGCAGTTTCCGGTACGTGCTA +
Preference number: 3 (lower is better)
Translates to: TLKKASMSIWSG*RSFHGSFRYVL
Trigger: TAGCACGTACCGGAAACTGCCATGGAAGGACCTGCACCCTGACCAGATGCTCATGGAGGCCTTCTTCAAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000592272.5
3UTR CCA 72 bp GCATTTAGGGAGATAATTATGCCACTTGGACCACACTaGTGCGACTCTAACCCCAGGGCTGGGGCCAGAATG +
Preference number: 3 (lower is better)
Translates to: AFREIIMPLGPH*CDSNPRAGARM
Trigger: CATTCTGGCCCCAGCCCTGGGGTTAGAGTCGCACCAGTGTGGTCCAAGTGGCATAATTATCTCCCTAAATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR-3UTR CAA 90 bp GGGGCAAGTGATGTGAATGAGGCTAGGGTCAGGGCCCGAGGGAATGCACAGACTTGGATGGAAATTGACTaGTCATCATCTCTACTGCCC +
Preference number: 3 (lower is better)
Translates to: GASDVNEARVRARGNAQTWMEID*SSSLLP
Trigger: GGGCAGTAGAGATGATGACAAGTCAATTTCCATCCA...AGTCTGTGCATTCCCTCGGGCCCTGACCCTAGCCTCATTCACATCACTTGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR TCA 72 bp TTCAGGTCTGTGCACACCAGCTGGGTGGCGTCCTTCTaGCTCAATAGCACAGCAGAGGAAATAACTGGCACA +
Preference number: 3 (lower is better)
Translates to: FRSVHTSWVASF*LNSTAEEITGT
Trigger: TGTGCCAGTTATTTCCTCTGCTGTGCTATTGAGTCAGAAGGACGCCACCCAGCTGGTGTGCACAGACCTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587884.1
3UTR TCA 72 bp TCATCTGGTTCAAGGCCCCAGGCAGTAAGTGCCAAGTaGATGGACTCCAGAAGCCTGGTACGATCAGACAGA +
Preference number: 3 (lower is better)
Translates to: SSGSRPQAVSAK*MDSRSLVRSDR
Trigger: TCTGTCTGATCGTACCAGGCTTCTGGAGTCCATTCACTTGGCACTTACTGCCTGGGGCCTTGAACCAGATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587884.1
3UTR GCA 72 bp ATCTGTGCAAAACATGCTCCTCCCAGACTGCCAGCTTaGCATCCTGATTCAGACAGGCAGCTTCTCCATGAG +
Preference number: 3 (lower is better)
Translates to: ICAKHAPPRLPA*HPDSDRQLLHE
Trigger: CTCATGGAGAAGCTGCCTGTCTGAATCAGGATGGCAAGCTGGCAGTCTGGGAGGAGCATGTTTTGCACAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR GCA 72 bp TCTTGGCACCTGCAAGCAAGCACCAACTTAAATGTATaGCCCAGGTGCCTCATTTGTCTCACCCTAGCCCTG +
Preference number: 3 (lower is better)
Translates to: SWHLQASTNLNV*PRCLICLTLAL
Trigger: CAGGGCTAGGGTGAGACAAATGAGGCACCTGGGGCATACATTTAAGTTGGTGCTTGCTTGCAGGTGCCAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR GCA 72 bp GCCAATCCAGGTCCGGATACTGCCCCGAAGGAACTCTaGTGTTGGAATAGTCGCGTTGTTCATCATCATCAG +
Preference number: 3 (lower is better)
Translates to: ANPGPDTAPKEL*CWNSRVVHHHQ
Trigger: CTGATGATGATGAACAACGCGACTATTCCAACAGCAGAGTTCCTTCGGGGCAGTATCCGGACCTGGATTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
3UTR CCA 72 bp AGGCACCACGGGGGTAAACCCAAGGAAGCACTCTCTTaGCACCTGCAAGCAAGCACCAACTTAAATGTATGC +
Preference number: 3 (lower is better)
Translates to: RHHGGKPKEALS*HLQASTNLNVC
Trigger: GCATACATTTAAGTTGGTGCTTGCTTGCAGGTGCCAAGAGAGTGCTTCCTTGGGTTTACCCCCGTGGTGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR CCA 72 bp TACCAGAGTGAAGGAAACCTCAAATACAGCTACTCCTaGACACTGATGCCCGAGGCATGCTGTGGAAACCGG +
Preference number: 3 (lower is better)
Translates to: YQSEGNLKYSYS*TLMPEACCGNR
Trigger: CCGGTTTCCACAGCATGCCTCGGGCATCAGTGTCCAGGAGTAGCTGTATTTGAGGTTTCCTTCACTCTGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR CCA 72 bp CCAGGTCCGGATACTGCCCCGAAGGAACTCTGCTGTTaGAATAGTCGCGTTGTTCATCATCATCAGGACTTC +
Preference number: 3 (lower is better)
Translates to: PGPDTAPKELCC*NSRVVHHHQDF
Trigger: GAAGTCCTGATGATGATGAACAACGCGACTATTCCAACAGCAGAGTTCCTTCGGGGCAGTATCCGGACCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
3UTR CCA 72 bp GTTGCAACAGATTCAGGTCTGTGCACACCAGCTGGGTaGCGTCCTTCTGACTCAATAGCACAGCAGAGGAAA +
Preference number: 3 (lower is better)
Translates to: VATDSGLCTPAG*RPSDSIAQQRK
Trigger: TTTCCTCTGCTGTGCTATTGAGTCAGAAGGACGCCACCCAGCTGGTGTGCACAGACCTGAATCTGTTGCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587884.1
3UTR-3UTR CAA 90 bp ATTAATAGGCAGTGGGACAACATGATTCCGGGATGCAGCCTGCCTCTGCAACCCCTAACGCCTCCCAACTaGCATCTCAGTCAACTACAC +
Preference number: 3 (lower is better)
Translates to: INRQWDNMIPGCSLPLQPLTPPN*HLSQLH
Trigger: GTGTAGTTGACTGAGATGCAAGTTGGGAGGCGTTAG...GGGTTGCAGAGGCAGGCTGCATCCCGGAATCATGTTGTCCCACTGCCTATTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR-3UTR CAA 90 bp GGAGGCAGACAATCATGCTGCGGGTTTCTGGGTGGGGACTGGAATTCCAGGCATGTTGGAATAGTCGCGTaGTTCATCATCATCAGGACT +
Preference number: 3 (lower is better)
Translates to: GGRQSCCGFLGGDWNSRHVGIVA*FIIIRT
Trigger: AGTCCTGATGATGATGAACAACGCGACTATTCCAAC...ATGCCTGGAATTCCAGTCCCCACCCAGAAACCCGCAGCATGATTGTCTGCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
3UTR-3UTR CAA 90 bp GGGGCAAGTGATGTGAATGAGGCTAGGGTCAGGGCCCGAGGGAATGCACAGACTATTGACTTCTTTACTTaGGAGGAACACAAATGGGGT +
Preference number: 3 (lower is better)
Translates to: GASDVNEARVRARGNAQTIDFFT*EEHKWG
Trigger: ACCCCATTTGTGTTCCTCCAAAGTAAAGAAGTCAAT...AGTCTGTGCATTCCCTCGGGCCCTGACCCTAGCCTCATTCACATCACTTGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR-3UTR CAA 90 bp GTCCCGAGTGTGCAGGAAGGAGCTTTGGAAACATGTACAGGTGGGTCCCGAATCACGGCTGGATGGAAATaGACTTGTCATCATCTCTAC +
Preference number: 3 (lower is better)
Translates to: VPSVQEGALETCTGGSRITAGWK*TCHHLY
Trigger: GTAGAGATGATGACAAGTCAATTTCCATCCAGCCGT...GATTCGGGACCCACCTGTACATGTTTCCAAAGCTCCTTCCTGCACACTCGGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR-3UTR CAA 90 bp GGTCCCGAGTGTGCAGGAAGGAGCTTTGGAAACATGTACAGGTGGGTCCCGAATGTTTCAGCAGGTCCATaGGCTTCATCTGAGTTTGAA +
Preference number: 3 (lower is better)
Translates to: GPECAGRSFGNMYRWVPNVSAGP*ASSEFE
Trigger: TTCAAACTCAGATGAAGCCAATGGACCTGCTGAAAC...ATTCGGGACCCACCTGTACATGTTTCCAAAGCTCCTTCCTGCACACTCGGGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR-3UTR CAA 90 bp GTCCCGAGTGTGCAGGAAGGAGCTTTGGAAACATGTACAGGTGGGTCCCGAATCTCTGAGACGGACATTTaGTGGCCTGTAAAACTCAAG +
Preference number: 3 (lower is better)
Translates to: VPSVQEGALETCTGGSRISETDI*WPVKLK
Trigger: CTTGAGTTTTACAGGCCACAAAATGTCCGTCTCAGA...GATTCGGGACCCACCTGTACATGTTTCCAAAGCTCCTTCCTGCACACTCGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR-3UTR CAA 90 bp CACCTGCAAGCAAGCACCAACTTAAATGTATGCCCCAGGTGCCTCATTTGTCTCCACAGGGCCTTGGTCTaGCTTGATTCCCGTCTTGAT +
Preference number: 3 (lower is better)
Translates to: HLQASTNLNVCPRCLICLHRALV*LDSRLD
Trigger: ATCAAGACGGGAATCAAGCAAGACCAAGGCCCTGTG...GAGACAAATGAGGCACCTGGGGCATACATTTAAGTTGGTGCTTGCTTGCAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR-3UTR CAA 90 bp TGCTGTACATGCTTCACAATAATGCATCAGGTGCAACCAAAGGGCTCCTGCATCCTGCTCCGCGGAGCTTaGCATAAGCAGCCTGAGAAT +
Preference number: 3 (lower is better)
Translates to: CCTCFTIMHQVQPKGSCILLRGA*HKQPEN
Trigger: ATTCTCAGGCTGCTTATGCAAAGCTCCGCGGAGCAG...GATGCAGGAGCCCTTTGGTTGCACCTGATGCATTATTGTGAAGCATGTACAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587884.1
3UTR-3UTR CAA 90 bp AGTGTTAGAAAGGCGCTTCCTTACCTGTTAGACAAAGGCGACTTCCGGCCAAACGGAGAGCTGAAGGACTaGGTGCCACCACAAAAACAG +
Preference number: 3 (lower is better)
Translates to: SVRKALPYLLDKGDFRPNGELKD*VPPQKQ
Trigger: CTGTTTTTGTGGTGGCACCAAGTCCTTCAGCTCTCC...GTTTGGCCGGAAGTCGCCTTTGTCTAACAGGTAAGGAAGCGCCTTTCTAACACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
3UTR TCA 72 bp GTGAAGGAAACCTCAAATACAGCTACTCCTGGACACTaGTGCCCGAGGCATGCTGTGGAAACCGGACCAAAA +
Preference number: 3 (lower is better)
Translates to: VKETSNTATPGH*CPRHAVETGPK
Trigger: TTTTGGTCCGGTTTCCACAGCATGCCTCGGGCATCAGTGTCCAGGAGTAGCTGTATTTGAGGTTTCCTTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR TCA 72 bp CTGAGTCTCTCCTCAGCCACGAGGTTCTGCCTGCTCTaGACCAAGAGCAGAATTCGAATGACAGATTCTGTC +
Preference number: 3 (lower is better)
Translates to: LSLSSATRFCLL*TKSRIRMTDSV
Trigger: GACAGAATCTGTCATTCGAATTCTGCTCTTGGTTCAGAGCAGGCAGAACCTCGTGGCTGAGGAGAGACTCAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
3UTR GCA 72 bp AATATCCTCATCTGGTTCAAGGCCCCAGGCAGTAAGTaGCAAGTGAATGGACTCCAGAAGCCTGGTACGATC +
Preference number: 3 (lower is better)
Translates to: NILIWFKAPGSK*QVNGLQKPGTI
Trigger: GATCGTACCAGGCTTCTGGAGTCCATTCACTTGGCACTTACTGCCTGGGGCCTTGAACCAGATGAGGATATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587884.1
3UTR-3UTR CAA 90 bp CTCCGCGGAGCTTTGCATAAGCAGCCTGAGAATGTCACTGTACTGGTCAGGAAAGTCTCCATTACCTGCTaGTCTGACAAGAGAGCATCA +
Preference number: 3 (lower is better)
Translates to: LRGALHKQPENVTVLVRKVSITC*SDKRAS
Trigger: TGATGCTCTCTTGTCAGACAAGCAGGTAATGGAGAC...TTTCCTGACCAGTACAGTGACATTCTCAGGCTGCTTATGCAAAGCTCCGCGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000590884.5
3UTR-3UTR CAA 90 bp GCTGTTGGAATAGTCGCGTTGTTCATCATCATCAGGACTTCCATAAAGAGGCTGTTTTCCTGCTGGCAGTaGGGTCTTGGGCCAAACAGG +
Preference number: 3 (lower is better)
Translates to: AVGIVALFIIIRTSIKRLFSCWQ*GLGPNR
Trigger: CCTGTTTGGCCCAAGACCCAACTGCCAGCAGGAAAA...CAGCCTCTTTATGGAAGTCCTGATGATGATGAACAACGCGACTATTCCAACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000590884.5
3UTR TCA 72 bp GGGAACCTGAAGGGATACCAGAATGGGTCCCCATCCTaGATTCTGATTGAGAGGGCTTTCTTTGAAGTAGGC +
Preference number: 3 (lower is better)
Translates to: GNLKGYQNGSPS*ILIERAFFEVG
Trigger: GCCTACTTCAAAGAAAGCCCTCTCAATCAGAATTCAGGATGGGGACCCATTCTGGTATCCCTTCAGGTTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
3UTR TCA 72 bp ATTCTGTCAGGACGGAGTCATTCTGCTCTGTCTGAATaGGGGAGAGCTGAAGGACTTGGTGCCACCACAAAA +
Preference number: 3 (lower is better)
Translates to: ILSGRSHSALSE*GRAEGLGATTK
Trigger: TTTTGTGGTGGCACCAAGTCCTTCAGCTCTCCCTCATTCAGACAGAGCAGAATGACTCCGTCCTGACAGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
3UTR TCA 72 bp GGTTCTGCCTGCTCTGAACCAAGAGCAGAATTCGAATaGCAGATTCTGTCAGGACGGAGTCATTCTGCTCTG +
Preference number: 3 (lower is better)
Translates to: GSACSEPRAEFE*QILSGRSHSAL
Trigger: CAGAGCAGAATGACTCCGTCCTGACAGAATCTGTCATTCGAATTCTGCTCTTGGTTCAGAGCAGGCAGAACC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
3UTR GCA 72 bp GAGATGACTGGGACATTCGGCAACTGTGAGTGGCTCTaGACCCAAGTGGAACTTAGTAAGTTTCTCTTGTGG +
Preference number: 3 (lower is better)
Translates to: EMTGTFGNCEWL*TQVELSKFLLW
Trigger: CCACAAGAGAAACTTACTAAGTTCCACTTGGGTGCAGAGCCACTCACAGTTGCCGAATGTCCCAGTCATCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR GCA 72 bp CCTCCCTCCCTCTATGTCTGGTGTGTTCCAGCATTCTaGCCTTCACTTGTTCTATTAATAGGCAGTGGGACA +
Preference number: 3 (lower is better)
Translates to: PPSLYVWCVPAF*PSLVLLIGSGT
Trigger: TGTCCCACTGCCTATTAATAGAACAAGTGAAGGGCAGAATGCTGGAACACACCAGACATAGAGGGAGGGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR GCA 72 bp AAATACAGCTACTCCTGGACACTGATGCCCGAGGCATaGTGTGGAAACCGGACCAAAATGAAGTCTGCGTTA +
Preference number: 3 (lower is better)
Translates to: KYSYSWTLMPEA*CGNRTKMKSAL
Trigger: TAACGCAGACTTCATTTTGGTCCGGTTTCCACAGCATGCCTCGGGCATCAGTGTCCAGGAGTAGCTGTATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR GCA 72 bp ATTCTTATGCATGCCTTCAAACTGAACCGTGACAACTaGGGCTCCTTGGCATTTCTTACCGCTGCTGCCTCT +
Preference number: 3 (lower is better)
Translates to: ILMHAFKLNRDN*GSLAFLTAAAS
Trigger: AGAGGCAGCAGCGGTAAGAAATGCCAAGGAGCCGCAGTTGTCACGGTTCAGTTTGAAGGCATGCATAAGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587884.1
3UTR CCA 72 bp AGCATTCTGCCCTTCACTTGTTCTATTAATAGGCAGTaGGACAACATGATTCCGGGATGCAGCCTGCCTCTG +
Preference number: 3 (lower is better)
Translates to: SILPFTCSINRQ*DNMIPGCSLPL
Trigger: CAGAGGCAGGCTGCATCCCGGAATCATGTTGTCCCACTGCCTATTAATAGAACAAGTGAAGGGCAGAATGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR CCA 72 bp GAGTGTGCAGGAAGGAGCTTTGGAAACATGTACAGGTaGGTCCCGAATCCACTGCTACTGTCATGCTATGTA +
Preference number: 3 (lower is better)
Translates to: ECAGRSFGNMYR*VPNPLLLSCYV
Trigger: TACATAGCATGACAGTAGCAGTGGATTCGGGACCCACCTGTACATGTTTCCAAAGCTCCTTCCTGCACACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR CCA 72 bp TGCAGGTCCTTCCATGGCAGTTTCCGGTACGTGCTATaGAAAGCGTACAGAATGAACTCTGGCATTTTGGGT +
Preference number: 3 (lower is better)
Translates to: CRSFHGSFRYVL*KAYRMNSGILG
Trigger: ACCCAAAATGCCAGAGTTCATTCTGTACGCTTTCCATAGCACGTACCGGAAACTGCCATGGAAGGACCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000592272.5
3UTR-3UTR CAA 90 bp CTGCCCCGAAGGAACTCTGCTGTTGGAATAGTCGCGTTGTTCATCATCATCAGGGGTGATTTTTCCATTTaGTTCCAGGGTGCTGAGGAA +
Preference number: 3 (lower is better)
Translates to: LPRRNSAVGIVALFIIIRGDFSI*FQGAEE
Trigger: TTCCTCAGCACCCTGGAACAAAATGGAAAAATCACC...CCTGATGATGATGAACAACGCGACTATTCCAACAGCAGAGTTCCTTCGGGGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
3UTR TCA 72 bp GCAGTTTCCGGTACGTGCTATGGAAAGCGTACAGAATaGACTCTGGCATTTTGGGTGCTGTACATGCTTCAC +
Preference number: 3 (lower is better)
Translates to: AVSGTCYGKRTE*TLAFWVLYMLH
Trigger: GTGAAGCATGTACAGCACCCAAAATGCCAGAGTTCATTCTGTACGCTTTCCATAGCACGTACCGGAAACTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000592272.5
3UTR GCA 72 bp CTCTCATGCAGTGAGTCAATACAGTCAGTGAACAGCTaGACAATGCTTGAGGCCACCACAGTATCACTCTCT +
Preference number: 3 (lower is better)
Translates to: LSCSESIQSVNS*TMLEATTVSLS
Trigger: AGAGAGTGATACTGTGGTGGCCTCAAGCATTGTGCAGCTGTTCACTGACTGTATTGACTCACTGCATGAGAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587884.1
3UTR CCA 72 bp TCTTGTGAGATGACTGGGACATTCGGCAACTGTGAGTaGCTCTGCACCCAAGTGGAACTTAGTAAGTTTCTC +
Preference number: 3 (lower is better)
Translates to: SCEMTGTFGNCE*LCTQVELSKFL
Trigger: GAGAAACTTACTAAGTTCCACTTGGGTGCAGAGCCACTCACAGTTGCCGAATGTCCCAGTCATCTCACAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR CCA 72 bp ATTCAGACAGGCAGCTTCTCCATGAGGATACACGGCTaGATGGAAATTGACTTGTCATCATCTCTACTGCCC +
Preference number: 3 (lower is better)
Translates to: IQTGSFSMRIHG*MEIDLSSSLLP
Trigger: GGGCAGTAGAGATGATGACAAGTCAATTTCCATCCAGCCGTGTATCCTCATGGAGAAGCTGCCTGTCTGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR CCA 72 bp TCTTACCGCTGCTGCCTCTGCACTCCAAATGTAGTGTaGTCTGTTCTTCACGATTCACATACTGCTTTGGCA +
Preference number: 3 (lower is better)
Translates to: SYRCCLCTPNVV*SVLHDSHTALA
Trigger: TGCCAAAGCAGTATGTGAATCGTGAAGAACAGACCACACTACATTTGGAGTGCAGAGGCAGCAGCGGTAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587884.1
3UTR-3UTR CAA 90 bp CACCTGCAAGCAAGCACCAACTTAAATGTATGCCCCAGGTGCCTCATTTGTCTCATAACACGGACTAATTaGGACACTTTCCCCAAACCG +
Preference number: 3 (lower is better)
Translates to: HLQASTNLNVCPRCLICLITRTN*DTFPKP
Trigger: CGGTTTGGGGAAAGTGTCCAAATTAGTCCGTGTTAT...GAGACAAATGAGGCACCTGGGGCATACATTTAAGTTGGTGCTTGCTTGCAGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR-3UTR CAA 90 bp CACCTGCAAGCAAGCACCAACTTAAATGTATGCCCCAGGTGCCTCATTTGTCTCAGCTCTACAGTGCAATaGAGCAAAGTTACTTGTGCA +
Preference number: 3 (lower is better)
Translates to: HLQASTNLNVCPRCLICLSSTVQ*SKVTCA
Trigger: TGCACAAGTAACTTTGCTCAATTGCACTGTAGAGCT...GAGACAAATGAGGCACCTGGGGCATACATTTAAGTTGGTGCTTGCTTGCAGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR-3UTR CAA 90 bp ACAGATCCCTCTGAGACGGACATTTTGTGGCCTGTAAAACTCAAGAGACTAAACCTAACGCCTCCCAACTaGCATCTCAGTCAACTACAC +
Preference number: 3 (lower is better)
Translates to: TDPSETDILWPVKLKRLNLTPPN*HLSQLH
Trigger: GTGTAGTTGACTGAGATGCAAGTTGGGAGGCGTTAG...GTTTAGTCTCTTGAGTTTTACAGGCCACAAAATGTCCGTCTCAGAGGGATCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR-3UTR CAA 90 bp TTCTGGCTGTCAGTAGGAATAGAAAGGCCCGCAGACACTTTTAGGAGCTTCATGATGAACTCTGGCATTTaGGGTGCTGTACATGCTTCA +
Preference number: 3 (lower is better)
Translates to: FWLSVGIERPADTFRSFMMNSGI*GAVHAS
Trigger: TGAAGCATGTACAGCACCCAAAATGCCAGAGTTCAT...CATGAAGCTCCTAAAAGTGTCTGCGGGCCTTTCTATTCCTACTGACAGCCAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000592272.5
3UTR GCA 72 bp GATGTTTTTCATGGCAACCAGAATCCTGCCTCCTCCTaGTCCCAGGAAGCTGTTAGACATCTTTATTTGGTC +
Preference number: 3 (lower is better)
Translates to: DVFHGNQNPASS*SQEAVRHLYLV
Trigger: GACCAAATAAAGATGTCTAACAGCTTCCTGGGAGCAGGAGGAGGCAGGATTCTGGTTGCCATGAAAAACATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR CCA 72 bp CAGAGACAGAAGTGGAAACATACAAAGAACTCCATCTaGAGGTCTTGTGAGATGACTGGGACATTCGGCAAC +
Preference number: 3 (lower is better)
Translates to: QRQKWKHTKNSI*RSCEMTGTFGN
Trigger: GTTGCCGAATGTCCCAGTCATCTCACAAGACCTCCAGATGGAGTTCTTTGTATGTTTCCACTTCTGTCTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR CCA 72 bp CTGTCTCCTGACACTGAGCCTTTCAGATATCGAACATaGTGTCTATCAAAGGGTGCAAACTTAGGTGTCGAC +
Preference number: 3 (lower is better)
Translates to: LSPDTEPFRYRT*CLSKGANLGVD
Trigger: GTCGACACCTAAGTTTGCACCCTTTGATAGACACCATGTTCGATATCTGAAAGGCTCAGTGTCAGGAGACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR-3UTR CAA 90 bp AATAGTCGCGTTGTTCATCATCATCAGGACTTCCATAAAGAGGCTGCTGAGGGCCTGATGAGTAAAAGCTaGGCATTTTGGAACTGCATC +
Preference number: 3 (lower is better)
Translates to: NSRVVHHHQDFHKEAAEGLMSKS*AFWNCI
Trigger: GATGCAGTTCCAAAATGCCAAGCTTTTACTCATCAG...GCCCTCAGCAGCCTCTTTATGGAAGTCCTGATGATGATGAACAACGCGACTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
3UTR-3UTR CAA 90 bp GAGGAATTGAACCATCTGATGAGTAAAAGCTTGGCATTTTGGAACTGCATCAAGGGTTCTGGCCTGCTGTaGCAACAGATTCAGGTCTGT +
Preference number: 3 (lower is better)
Translates to: EELNHLMSKSLAFWNCIKGSGLL*QQIQVC
Trigger: ACAGACCTGAATCTGTTGCAACAGCAGGCCAGAACC...CTTGATGCAGTTCCAAAATGCCAAGCTTTTACTCATCAGATGGTTCAATTCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587884.1
3UTR TCA 72 bp CAGCTTCTCCATGAGGATACACGGCTGGATGGAAATTaGCTTGTCATCATCTCTACTGCCCACTATAATCAC +
Preference number: 3 (lower is better)
Translates to: QLLHEDTRLDGN*LVIISTAHYNH
Trigger: GTGATTATAGTGGGCAGTAGAGATGATGACAAGTCAATTTCCATCCAGCCGTGTATCCTCATGGAGAAGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR TCA 72 bp GGTGAGATCTGTCTTGGGCAACAACTGATATTAAGCTaGGGTCTGCAGTCTCAACTTGCCACTAGCTTAATG +
Preference number: 3 (lower is better)
Translates to: GEICLGQQLILS*GLQSQLATSLM
Trigger: CATTAAGCTAGTGGCAAGTTGAGACTGCAGACCTCAGCTTAATATCAGTTGTTGCCCAAGACAGATCTCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR GCA 72 bp GTACAGAATGAACTCTGGCATTTTGGGTGCTGTACATaGTTCACAATAATGCATCAGGTGCAACCAAAGGGC +
Preference number: 3 (lower is better)
Translates to: VQNELWHFGCCT*FTIMHQVQPKG
Trigger: GCCCTTTGGTTGCACCTGATGCATTATTGTGAAGCATGTACAGCACCCAAAATGCCAGAGTTCATTCTGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000592272.5
3UTR CCA 72 bp CCGGTACGTGCTATGGAAAGCGTACAGAATGAACTCTaGCATTTTGGGTGCTGTACATGCTTCACAATAATG +
Preference number: 3 (lower is better)
Translates to: PVRAMESVQNEL*HFGCCTCFTIM
Trigger: CATTATTGTGAAGCATGTACAGCACCCAAAATGCCAGAGTTCATTCTGTACGCTTTCCATAGCACGTACCGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000592272.5
3UTR-3UTR CAA 90 bp GTCCCGAATCCACTGCTACTGTCATGCTATGTAGACAGTTGTGTAGACACATCTAGCTCTACAGTGCAATaGAGCAAAGTTACTTGTGCA +
Preference number: 3 (lower is better)
Translates to: VPNPLLLSCYVDSCVDTSSSTVQ*SKVTCA
Trigger: TGCACAAGTAACTTTGCTCAATTGCACTGTAGAGCT...AGATGTGTCTACACAACTGTCTACATAGCATGACAGTAGCAGTGGATTCGGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR-3UTR CAA 90 bp ACAGATCCCTCTGAGACGGACATTTTGTGGCCTGTAAAACTCAAGAGACTAAACTGGATGGAAATTGACTaGTCATCATCTCTACTGCCC +
Preference number: 3 (lower is better)
Translates to: TDPSETDILWPVKLKRLNWMEID*SSSLLP
Trigger: GGGCAGTAGAGATGATGACAAGTCAATTTCCATCCA...GTTTAGTCTCTTGAGTTTTACAGGCCACAAAATGTCCGTCTCAGAGGGATCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR-3UTR CAA 90 bp ACAGATCCCTCTGAGACGGACATTTTGTGGCCTGTAAAACTCAAGAGACTAAACACCAACTTCCCAATTTaGGGGGAAGCATTCCAAAAG +
Preference number: 3 (lower is better)
Translates to: TDPSETDILWPVKLKRLNTNFPI*GEAFQK
Trigger: CTTTTGGAATGCTTCCCCCAAAATTGGGAAGTTGGT...GTTTAGTCTCTTGAGTTTTACAGGCCACAAAATGTCCGTCTCAGAGGGATCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR-3UTR CAA 90 bp TCGGGCGGGTTAAAGACAATGATATCGTCTAAGAGCTTAGACATTTCCTGTTCTAGCACACTAACCCAGTaGACTTCACAGAGTACAGAC +
Preference number: 3 (lower is better)
Translates to: SGGLKTMISSKSLDISCSSTLTQ*TSQSTD
Trigger: GTCTGTACTCTGTGAAGTCAACTGGGTTAGTGTGCT...AGAACAGGAAATGTCTAAGCTCTTAGACGATATCATTGTCTTTAACCCGCCCGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
3UTR GCA 72 bp ATATCACTGTTGTCCTCACTTAGAAACTTCACCACTTaGTCATACAGCTGTATGAACTCTGCAGGTGCAGCA +
Preference number: 3 (lower is better)
Translates to: ISLLSSLRNFTT*SYSCMNSAGAA
Trigger: TGCTGCACCTGCAGAGTTCATACAGCTGTATGAGCAAGTGGTGAAGTTTCTAAGTGAGGACAACAGTGATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587884.1
3UTR GCA 72 bp TTCACAATAATGCATCAGGTGCAACCAAAGGGCTCCTaGATCACCTGGCAACAGCTTATCTTTAAAACTCTC +
Preference number: 3 (lower is better)
Translates to: FTIMHQVQPKGS*ITWQQLIFKTL
Trigger: GAGAGTTTTAAAGATAAGCTGTTGCCAGGTGATGCAGGAGCCCTTTGGTTGCACCTGATGCATTATTGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587884.1
3UTR CCA 72 bp AAAGCTGAGACAGATCCCTCTGAGACGGACATTTTGTaGCCTGTAAAACTCAAGAGACTAAACAGGGATGTT +
Preference number: 3 (lower is better)
Translates to: KAETDPSETDIL*PVKLKRLNRDV
Trigger: AACATCCCTGTTTAGTCTCTTGAGTTTTACAGGCCACAAAATGTCCGTCTCAGAGGGATCTGTCTCAGCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR-3UTR CAA 90 bp TCACCTTCATTTGAAAGGAACGAGGACATGAACACTCTTGGCTTGTATGACATGACGGCTGGATGGAAATaGACTTGTCATCATCTCTAC +
Preference number: 3 (lower is better)
Translates to: SPSFERNEDMNTLGLYDMTAGWK*TCHHLY
Trigger: GTAGAGATGATGACAAGTCAATTTCCATCCAGCCGT...CATGTCATACAAGCCAAGAGTGTTCATGTCCTCGTTCCTTTCAAATGAAGGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR-3UTR CAA 90 bp GTCCCGAATCCACTGCTACTGTCATGCTATGTAGACAGTTGTGTAGACACATCTAGTTACACACAGGCTTaGGTAATGAATGAACTGTCA +
Preference number: 3 (lower is better)
Translates to: VPNPLLLSCYVDSCVDTSSYTQA*VMNELS
Trigger: TGACAGTTCATTCATTACCAAAGCCTGTGTGTAACT...AGATGTGTCTACACAACTGTCTACATAGCATGACAGTAGCAGTGGATTCGGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR TCA 72 bp GTTTTCTGCATGTACAGCAGCTTCCACAATATTAAGTaGTGGTGGTTTAGCAGCTTCTGCTTGCAACTGCTT +
Preference number: 3 (lower is better)
Translates to: VFCMYSSFHNIK*WWFSSFCLQLL
Trigger: AAGCAGTTGCAAGCAGAAGCTGCTAAACCACCATCACTTAATATTGTGGAAGCTGCTGTACATGCAGAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587884.1
3UTR TCA 72 bp ACCTGGCAACAGCTTATCTTTAAAACTCTCATGCAGTaGGTCAATACAGTCAGTGAACAGCTGCACAATGCT +
Preference number: 3 (lower is better)
Translates to: TWQQLIFKTLMQ*VNTVSEQLHNA
Trigger: AGCATTGTGCAGCTGTTCACTGACTGTATTGACTCACTGCATGAGAGTTTTAAAGATAAGCTGTTGCCAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587884.1
3UTR GCA 72 bp AAATGTAGTGTGGTCTGTTCTTCACGATTCACATACTaGTTTGGCATTGTGTCTAACAGCTCACCATCCAGA +
Preference number: 3 (lower is better)
Translates to: KCSVVCSSRFTY*FGIVSNSSPSR
Trigger: TCTGGATGGTGAGCTGTTAGACACAATGCCAAAGCAGTATGTGAATCGTGAAGAACAGACCACACTACATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587884.1
3UTR GCA 72 bp ATGGAAAGCGTACAGAATGAACTCTGGCATTTTGGGTaGTGTACATGCTTCACAATAATGCATCAGGTGCAA +
Preference number: 3 (lower is better)
Translates to: MESVQNELWHFG*CTCFTIMHQVQ
Trigger: TTGCACCTGATGCATTATTGTGAAGCATGTACAGCACCCAAAATGCCAGAGTTCATTCTGTACGCTTTCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000592272.5
3UTR-3UTR CAA 90 bp TCACCTTCATTTGAAAGGAACGAGGACATGAACACTCTTGGCTTGTATGACATGAGTTACACACAGGCTTaGGTAATGAATGAACTGTCA +
Preference number: 3 (lower is better)
Translates to: SPSFERNEDMNTLGLYDMSYTQA*VMNELS
Trigger: TGACAGTTCATTCATTACCAAAGCCTGTGTGTAACT...CATGTCATACAAGCCAAGAGTGTTCATGTCCTCGTTCCTTTCAAATGAAGGTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR TCA 72 bp GGAACACAAATGGGGTTTAAAAGTAAGGGTACTGAGTaGCTTCCAAGGTTGTCAGATCTGGAACATTTACAT +
Preference number: 3 (lower is better)
Translates to: GTQMGFKSKGTE*LPRLSDLEHLH
Trigger: ATGTAAATGTTCCAGATCTGACAACCTTGGAAGTCACTCAGTACCCTTACTTTTAAACCCCATTTGTGTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR TCA 72 bp CACTATAATCACGATCAAGTGGTCGTATTTTACACATaGCCCACTTTAACTAACTCGGCATTTTTATCTCCC +
Preference number: 3 (lower is better)
Translates to: HYNHDQVVVFYT*PTLTNSAFLSP
Trigger: GGGAGATAAAAATGCCGAGTTAGTTAAAGTGGGTCATGTGTAAAATACGACCACTTGATCGTGATTATAGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR TCA 72 bp AGACTAAGTAAAGGTGAATCTGTTTGGTCTACCAGTTaGACTTCCTTTGCCAATAAAATCATCATGAAAAGG +
Preference number: 3 (lower is better)
Translates to: RLSKGESVWSTS*TSFANKIIMKR
Trigger: CCTTTTCATGATGATTTTATTGGCAAAGGAAGTTCAACTGGTAGACCAAACAGATTCACCTTTACTTAGTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR TCA 90 bp GCATCAGAAGAGCTGGGAAGCACGGCGCCCTCGGTGGACGCTGCCCCCTGCTGGCAGGCAAACCAGACCTaGGTGGGCGTGGCCAAGCCC +
Preference number: 4 (lower is better)
Translates to: ASEELGSTAPSVDAAPCWQANQT*VGVAKP
Trigger: GGGCTTGGCCACGCCCACTCAGGTCTGGTTTGCCTG...CCAGCAGGGGGCAGCGTCCACCGAGGGCGCCGTGCTTCCCAGCTCTTCTGATGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000590884.5
CDS-3UTR CCA 90 bp TCTGTAGTCTCAGCCATGTGGCGGACGGACGCCAGGCTCTGGCAGGCTGCTGTTGACGCTGCCCCCTGCTaGCAGCTGGGGGCGCAGCAG +
Preference number: 4 (lower is better)
Translates to: SVVSAMWRTDARLWQAAVDAAPC*QLGAQQ
Trigger: CTGCTGCGCCCCCAGCTGCCAGCAGGGGGCAGCGTC...AACAGCAGCCTGCCAGAGCCTGGCGTCCGTCCGCCACATGGCTGAGACTACAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CCA 90 bp CAGCCTAGGCCTGCCCATCACAGGCTGGACCACCAGGCACTGGACAGGGGCAGAGCCATGTGGCGGGTCTaGCTGTCCATGTCGGGCGGG +
Preference number: 4 (lower is better)
Translates to: QPRPAHHRLDHQALDRGRAMWRV*LSMSGG
Trigger: CCCGCCCGACATGGACAGCCAGACCCGCCACATGGC...TCTGCCCCTGTCCAGTGCCTGGTGGTCCAGCCTGTGATGGGCAGGCCTAGGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CCA 90 bp GCATCAGAAGAGCTGGGAAGCACGGCGCCCTCGGTGGACGCTGCCCCCTGCTGGGTAGTCTCAGCCATGTaGCGGACGGACGCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: ASEELGSTAPSVDAAPCWVVSAM*RTDARL
Trigger: GAGCCTGGCGTCCGTCCGCCACATGGCTGAGACTAC...CCAGCAGGGGGCAGCGTCCACCGAGGGCGCCGTGCTTCCCAGCTCTTCTGATGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000590884.5
CDS-3UTR GCA 90 bp CAGCCTAGGCCTGCCCATCACAGGCTGGACCACCAGGCACTGGACAGGGGCAGACTTGGAGCTGCTGCTTaGACTGGGCGGGCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: QPRPAHHRLDHQALDRGRLGAAA*TGRAAG
Trigger: CCCTGCAGCCCGCCCAGTGCAAGCAGCAGCTCCAAG...TCTGCCCCTGTCCAGTGCCTGGTGGTCCAGCCTGTGATGGGCAGGCCTAGGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR TCA 90 bp CAGCCTAGGCCTGCCCATCACAGGCTGGACCACCAGGCACTGGACAGGGGCAGAGTCACGCCTTGGAGCTaGGGTCCCGAGTGTGCAGGA +
Preference number: 4 (lower is better)
Translates to: QPRPAHHRLDHQALDRGRVTPWS*GPECAG
Trigger: TCCTGCACACTCGGGACCTCAGCTCCAAGGCGTGAC...TCTGCCCCTGTCCAGTGCCTGGTGGTCCAGCCTGTGATGGGCAGGCCTAGGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR GCA 90 bp GCATCAGAAGAGCTGGGAAGCACGGCGCCCTCGGTGGACGCTGCCCCCTGCTGGGGCAGACAATCATGCTaGGGGTTTCTGGGTGGGGAC +
Preference number: 4 (lower is better)
Translates to: ASEELGSTAPSVDAAPCWGRQSC*GFLGGD
Trigger: GTCCCCACCCAGAAACCCGCAGCATGATTGTCTGCC...CCAGCAGGGGGCAGCGTCCACCGAGGGCGCCGTGCTTCCCAGCTCTTCTGATGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000590884.5
CDS-3UTR CCA 90 bp CAGCCTAGGCCTGCCCATCACAGGCTGGACCACCAGGCACTGGACAGGGGCAGACCCTGTGGTGAAGTCTaGAGCCTGCAGCCGTTCGCC +
Preference number: 4 (lower is better)
Translates to: QPRPAHHRLDHQALDRGRPCGEV*SLQPFA
Trigger: GGCGAACGGCTGCAGGCTCCAGACTTCACCACAGGG...TCTGCCCCTGTCCAGTGCCTGGTGGTCCAGCCTGTGATGGGCAGGCCTAGGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR TCA 90 bp CAGCCTAGGCCTGCCCATCACAGGCTGGACCACCAGGCACTGGACAGGGGCAGATGCCTTGTTGGGGGATaGCGCTGCGTCTCATCGCTG +
Preference number: 4 (lower is better)
Translates to: QPRPAHHRLDHQALDRGRCLVGG*RCVSSL
Trigger: CAGCGATGAGACGCAGCGTCATCCCCCAACAAGGCA...TCTGCCCCTGTCCAGTGCCTGGTGGTCCAGCCTGTGATGGGCAGGCCTAGGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR GCA 90 bp GCATCAGAAGAGCTGGGAAGCACGGCGCCCTCGGTGGACGCTGCCCCCTGCTGGAGATTCCCGAAGAGCTaGGGTTCTGGCCTGCTGTTG +
Preference number: 4 (lower is better)
Translates to: ASEELGSTAPSVDAAPCWRFPKS*GSGLLL
Trigger: CAACAGCAGGCCAGAACCGCAGCTCTTCGGGAATCT...CCAGCAGGGGGCAGCGTCCACCGAGGGCGCCGTGCTTCCCAGCTCTTCTGATGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000590884.5
CDS-3UTR GCA 90 bp CAGCCTAGGCCTGCCCATCACAGGCTGGACCACCAGGCACTGGACAGGGGCAGATTCCGGGATGCAGCCTaGCTCTGCAACCCACCTGTG +
Preference number: 4 (lower is better)
Translates to: QPRPAHHRLDHQALDRGRFRDAA*LCNPPV
Trigger: CACAGGTGGGTTGCAGAGGCAGGCTGCATCCCGGAA...TCTGCCCCTGTCCAGTGCCTGGTGGTCCAGCCTGTGATGGGCAGGCCTAGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR TCA 90 bp CAGCCTAGGCCTGCCCATCACAGGCTGGACCACCAGGCACTGGACAGGGGCAGAGGAACTCTTCCATGGTaGGCTCGGGAACCTGAAGGG +
Preference number: 4 (lower is better)
Translates to: QPRPAHHRLDHQALDRGRGTLPW*AREPEG
Trigger: CCCTTCAGGTTCCCGAGCTCACCATGGAAGAGTTCC...TCTGCCCCTGTCCAGTGCCTGGTGGTCCAGCCTGTGATGGGCAGGCCTAGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR GCA 90 bp CAGCCTAGGCCTGCCCATCACAGGCTGGACCACCAGGCACTGGACAGGGGCAGAGGCAGACAATCATGCTaGGGGTTTCTGGGTGGGGAC +
Preference number: 4 (lower is better)
Translates to: QPRPAHHRLDHQALDRGRGRQSC*GFLGGD
Trigger: GTCCCCACCCAGAAACCCGCAGCATGATTGTCTGCC...TCTGCCCCTGTCCAGTGCCTGGTGGTCCAGCCTGTGATGGGCAGGCCTAGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR GCA 90 bp CAGCCTAGGCCTGCCCATCACAGGCTGGACCACCAGGCACTGGACAGGGGCAGAAGCCCCAGCCTGAACTaGTCTGGACAGAACCACGAC +
Preference number: 4 (lower is better)
Translates to: QPRPAHHRLDHQALDRGRSPSLN*SGQNHD
Trigger: GTCGTGGTTCTGTCCAGAGCAGTTCAGGCTGGGGCT...TCTGCCCCTGTCCAGTGCCTGGTGGTCCAGCCTGTGATGGGCAGGCCTAGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR GCA 90 bp CAGCCTAGGCCTGCCCATCACAGGCTGGACCACCAGGCACTGGACAGGGGCAGACTTGGACCACACTGGTaGGACTCTAACCCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: QPRPAHHRLDHQALDRGRLGPHW*DSNPRA
Trigger: AGCCCTGGGGTTAGAGTCGCACCAGTGTGGTCCAAG...TCTGCCCCTGTCCAGTGCCTGGTGGTCCAGCCTGTGATGGGCAGGCCTAGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CCA 90 bp CAGCCTAGGCCTGCCCATCACAGGCTGGACCACCAGGCACTGGACAGGGGCAGATTCACGTTGTCCCCATaGCTGGCTCCTGTCAGGTGC +
Preference number: 4 (lower is better)
Translates to: QPRPAHHRLDHQALDRGRFTLSP*LAPVRC
Trigger: GCACCTGACAGGAGCCAGCCATGGGGACAACGTGAA...TCTGCCCCTGTCCAGTGCCTGGTGGTCCAGCCTGTGATGGGCAGGCCTAGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CCA 90 bp CAGCCTAGGCCTGCCCATCACAGGCTGGACCACCAGGCACTGGACAGGGGCAGACTGCGGGTTTCTGGGTaGGGACTGGAATTCCAGGCA +
Preference number: 4 (lower is better)
Translates to: QPRPAHHRLDHQALDRGRLRVSG*GLEFQA
Trigger: TGCCTGGAATTCCAGTCCCCACCCAGAAACCCGCAG...TCTGCCCCTGTCCAGTGCCTGGTGGTCCAGCCTGTGATGGGCAGGCCTAGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR TCA 90 bp CAGCCTAGGCCTGCCCATCACAGGCTGGACCACCAGGCACTGGACAGGGGCAGATCATGTCAGGCACAGTaGCGGAGAAGGGAACAGCTG +
Preference number: 4 (lower is better)
Translates to: QPRPAHHRLDHQALDRGRSCQAQ*RRREQL
Trigger: CAGCTGTTCCCTTCTCCGTCACTGTGCCTGACATGA...TCTGCCCCTGTCCAGTGCCTGGTGGTCCAGCCTGTGATGGGCAGGCCTAGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR GCA 90 bp GCAGCCCAGGGCTCTCAGAGTGGCCTTCCAACACTCGGGGCTCAGAAGCTGCTCACGGAGGGCCTTGCTTaGAGCATGGTGGAAGTCAGC +
Preference number: 4 (lower is better)
Translates to: AAQGSQSGLPTLGAQKLLTEGLA*SMVEVS
Trigger: GCTGACTTCCACCATGCTGCAAGCAAGGCCCTCCGT...GAGCAGCTTCTGAGCCCCGAGTGTTGGAAGGCCACTCTGAGAGCCCTGGGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000590884.5
CDS-3UTR GCA 90 bp CAGCCTAGGCCTGCCCATCACAGGCTGGACCACCAGGCACTGGACAGGGGCAGAGAACACGGAGGGCCTTaGTTGCAGCATGGTGGAAGT +
Preference number: 4 (lower is better)
Translates to: QPRPAHHRLDHQALDRGREHGGP*LQHGGS
Trigger: ACTTCCACCATGCTGCAAGCAAGGCCCTCCGTGTTC...TCTGCCCCTGTCCAGTGCCTGGTGGTCCAGCCTGTGATGGGCAGGCCTAGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR GCA 90 bp CAGCCTAGGCCTGCCCATCACAGGCTGGACCACCAGGCACTGGACAGGGGCAGAGCTGCGGTTCTGGCCTaGTGTTGCAACAGATTCAGG +
Preference number: 4 (lower is better)
Translates to: QPRPAHHRLDHQALDRGRAAVLA*CCNRFR
Trigger: CCTGAATCTGTTGCAACAGCAGGCCAGAACCGCAGC...TCTGCCCCTGTCCAGTGCCTGGTGGTCCAGCCTGTGATGGGCAGGCCTAGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR GCA 90 bp CAGCCTAGGCCTGCCCATCACAGGCTGGACCACCAGGCACTGGACAGGGGCAGAAAAGGAAGGCAGCCATaGTTCGGGCAACCACTCGGA +
Preference number: 4 (lower is better)
Translates to: QPRPAHHRLDHQALDRGRKGRQP*FGQPLG
Trigger: TCCGAGTGGTTGCCCGAAGCATGGCTGCCTTCCTTT...TCTGCCCCTGTCCAGTGCCTGGTGGTCCAGCCTGTGATGGGCAGGCCTAGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CCA 90 bp CAGCCTAGGCCTGCCCATCACAGGCTGGACCACCAGGCACTGGACAGGGGCAGACATGCTGCGGGTTTCTaGGTGGGGACTGGAATTCCA +
Preference number: 4 (lower is better)
Translates to: QPRPAHHRLDHQALDRGRHAAGF*VGTGIP
Trigger: TGGAATTCCAGTCCCCACCCAGAAACCCGCAGCATG...TCTGCCCCTGTCCAGTGCCTGGTGGTCCAGCCTGTGATGGGCAGGCCTAGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CCA 90 bp TTAGACAAAGGCGACTTCCGGCCAAACCCAATTGCCCCCAGGATCCCAGAGCTGGCCATGTGGCGGGTCTaGCTGTCCATGTCGGGCGGG +
Preference number: 4 (lower is better)
Translates to: LDKGDFRPNPIAPRIPELAMWRV*LSMSGG
Trigger: CCCGCCCGACATGGACAGCCAGACCCGCCACATGGC...CAGCTCTGGGATCCTGGGGGCAATTGGGTTTGGCCGGAAGTCGCCTTTGTCTAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CCA 90 bp CAGCCTAGGCCTGCCCATCACAGGCTGGACCACCAGGCACTGGACAGGGGCAGACAGTCCACAGGGCCTTaGTCTTGCTTGATTCCCGTC +
Preference number: 4 (lower is better)
Translates to: QPRPAHHRLDHQALDRGRQSTGP*SCLIPV
Trigger: GACGGGAATCAAGCAAGACCAAGGCCCTGTGGACTG...TCTGCCCCTGTCCAGTGCCTGGTGGTCCAGCCTGTGATGGGCAGGCCTAGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR CAA 72 bp GCCGTTCGCCCTCCACGCTGCTCAGTCCACAGGGCCTaGGTCTTGCTTGATTCCCGTCTTGATGTGCGGCAC +
Preference number: 4 (lower is better)
Translates to: AVRPPRCSVHRA*VLLDSRLDVRH
Trigger: GTGCCGCACATCAAGACGGGAATCAAGCAAGACCAAGGCCCTGTGGACTGAGCAGCGTGGAGGGCGAACGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR TCA 90 bp CAGCCTAGGCCTGCCCATCACAGGCTGGACCACCAGGCACTGGACAGGGGCAGACCTGGATCATGCTGTTaGGAAGCTTCACGTTGTCCC +
Preference number: 4 (lower is better)
Translates to: QPRPAHHRLDHQALDRGRPGSCC*EASRCP
Trigger: GGGACAACGTGAAGCTTCTCAACAGCATGATCCAGG...TCTGCCCCTGTCCAGTGCCTGGTGGTCCAGCCTGTGATGGGCAGGCCTAGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR TCA 90 bp CGGACAAACTGCAGGGTGTGGAATGGGACTCAAGCTTGGCCTGTGTCCACAGACCAGGCAAACCAGACCTaGGTGGGCGTGGCCAAGCCC +
Preference number: 4 (lower is better)
Translates to: RTNCRVWNGTQAWPVSTDQANQT*VGVAKP
Trigger: GGGCTTGGCCACGCCCACTCAGGTCTGGTTTGCCTG...GTCTGTGGACACAGGCCAAGCTTGAGTCCCATTCCACACCCTGCAGTTTGTCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587884.1
CDS-3UTR TCA 90 bp CTCCATGAGCATCTGGTCAGGGTGCAGGTCCTTCCATGGCAGTTTCCGGTACGTCAGGCAAACCAGACCTaGGTGGGCGTGGCCAAGCCC +
Preference number: 4 (lower is better)
Translates to: LHEHLVRVQVLPWQFPVRQANQT*VGVAKP
Trigger: GGGCTTGGCCACGCCCACTCAGGTCTGGTTTGCCTG...ACGTACCGGAAACTGCCATGGAAGGACCTGCACCCTGACCAGATGCTCATGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000592272.5
CDS-3UTR TCA 90 bp GGGGCAAGTGATGTGAATGAGGCTAGGGTCAGGGCCCGAGGGAATGCACAGACTGGGCTGGGGCCAGAATaGGGTAAAGGAGGCACCACG +
Preference number: 4 (lower is better)
Translates to: GASDVNEARVRARGNAQTGLGPE*GKGGTT
Trigger: CGTGGTGCCTCCTTTACCTCATTCTGGCCCCAGCCC...AGTCTGTGCATTCCCTCGGGCCCTGACCCTAGCCTCATTCACATCACTTGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR GCA 90 bp CTCCGCGGAGCTTTGCATAAGCAGCCTGAGAATGTCACTGTACTGGTCAGGAAAGCCCTCGGTGGACGCTaGCCCCTGCTGGCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: LRGALHKQPENVTVLVRKALGGR*PLLAAG
Trigger: CCCAGCTGCCAGCAGGGGGCAGCGTCCACCGAGGGC...TTTCCTGACCAGTACAGTGACATTCTCAGGCTGCTTATGCAAAGCTCCGCGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000590884.5
CDS-3UTR GCA 90 bp CAGCCTAGGCCTGCCCATCACAGGCTGGACCACCAGGCACTGGACAGGGGCAGATCAGCACTGTTTTCCTaGTGGCAGTTGGGTCTTGGG +
Preference number: 4 (lower is better)
Translates to: QPRPAHHRLDHQALDRGRSALFS*WQLGLG
Trigger: CCCAAGACCCAACTGCCAGCAGGAAAACAGTGCTGA...TCTGCCCCTGTCCAGTGCCTGGTGGTCCAGCCTGTGATGGGCAGGCCTAGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CCA 90 bp CAGCCTAGGCCTGCCCATCACAGGCTGGACCACCAGGCACTGGACAGGGGCAGACGGGGCCCACTTCATTaGGCTGAGTGCTTACAGATA +
Preference number: 4 (lower is better)
Translates to: QPRPAHHRLDHQALDRGRRGPLH*AECLQI
Trigger: TATCTGTAAGCACTCAGCCCAATGAAGTGGGCCCCG...TCTGCCCCTGTCCAGTGCCTGGTGGTCCAGCCTGTGATGGGCAGGCCTAGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CCA 90 bp GGGGCAAGTGATGTGAATGAGGCTAGGGTCAGGGCCCGAGGGAATGCACAGACTCCAGGGCTCTCAGAGTaGCCTTCCAACACTCGGGGC +
Preference number: 4 (lower is better)
Translates to: GASDVNEARVRARGNAQTPGLSE*PSNTRG
Trigger: GCCCCGAGTGTTGGAAGGCCACTCTGAGAGCCCTGG...AGTCTGTGCATTCCCTCGGGCCCTGACCCTAGCCTCATTCACATCACTTGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CCA 90 bp GACTTCCGGCCAAACCCAATTGCCCCCAGGATCCCAGAGCTGAGTCTCTCCTCACCAGGGCTCTCAGAGTaGCCTTCCAACACTCGGGGC +
Preference number: 4 (lower is better)
Translates to: DFRPNPIAPRIPELSLSSPGLSE*PSNTRG
Trigger: GCCCCGAGTGTTGGAAGGCCACTCTGAGAGCCCTGG...TGAGGAGAGACTCAGCTCTGGGATCCTGGGGGCAATTGGGTTTGGCCGGAAGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CCA 90 bp ACCACAAAAACAGCTTTGCCTCTTCCTCCACGGAGCTTGGGTACACCTGTTCCAGACGCTGCCCCCTGCTaGCAGCTGGGGGCGCAGCAG +
Preference number: 4 (lower is better)
Translates to: TTKTALPLPPRSLGTPVPDAAPC*QLGAQQ
Trigger: CTGCTGCGCCCCCAGCTGCCAGCAGGGGGCAGCGTC...TGGAACAGGTGTACCCAAGCTCCGTGGAGGAAGAGGCAAAGCTGTTTTTGTGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CCA 90 bp GTCCCGAGTGTGCAGGAAGGAGCTTTGGAAACATGTACAGGTGGGTCCCGAATCGCCATGTGGCGGGTCTaGCTGTCCATGTCGGGCGGG +
Preference number: 4 (lower is better)
Translates to: VPSVQEGALETCTGGSRIAMWRV*LSMSGG
Trigger: CCCGCCCGACATGGACAGCCAGACCCGCCACATGGC...GATTCGGGACCCACCTGTACATGTTTCCAAAGCTCCTTCCTGCACACTCGGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CCA 90 bp GCATCAGAAGAGCTGGGAAGCACGGCGCCCTCGGTGGACGCTGCCCCCTGCTGGGAAGGGATACCAGAATaGGTCCCCATCCTGAATTCT +
Preference number: 4 (lower is better)
Translates to: ASEELGSTAPSVDAAPCWEGIPE*VPILNS
Trigger: AGAATTCAGGATGGGGACCCATTCTGGTATCCCTTC...CCAGCAGGGGGCAGCGTCCACCGAGGGCGCCGTGCTTCCCAGCTCTTCTGATGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000590884.5
CDS-3UTR CCA 90 bp CAGCCTAGGCCTGCCCATCACAGGCTGGACCACCAGGCACTGGACAGGGGCAGATTGTGTAGACACATCTaGCAGGACCTCCCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: QPRPAHHRLDHQALDRGRLCRHI*QDLPPS
Trigger: AGAGGGAGGGAGGTCCTGCCAGATGTGTCTACACAA...TCTGCCCCTGTCCAGTGCCTGGTGGTCCAGCCTGTGATGGGCAGGCCTAGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CCA 90 bp TCGACAGGGGCAAGTGATGTGAATGAGGCTAGGGTCAGGGCCCGAGGGAATGCAACATTGCAGGGGAGATaGGCGCGGTGGCTCACGCCT +
Preference number: 4 (lower is better)
Translates to: STGASDVNEARVRARGNATLQGR*ARWLTP
Trigger: AGGCGTGAGCCACCGCGCCCATCTCCCCTGCAATGT...TGCATTCCCTCGGGCCCTGACCCTAGCCTCATTCACATCACTTGCCCCTGTCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR CAA 72 bp CGCCCTCCACGCTGCTCAGTCCACAGGGCCTTGGTCTaGCTTGATTCCCGTCTTGATGTGCGGCACCCATCA +
Preference number: 4 (lower is better)
Translates to: RPPRCSVHRALV*LDSRLDVRHPS
Trigger: TGATGGGTGCCGCACATCAAGACGGGAATCAAGCAAGACCAAGGCCCTGTGGACTGAGCAGCGTGGAGGGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR TCA 90 bp CAGCCTAGGCCTGCCCATCACAGGCTGGACCACCAGGCACTGGACAGGGGCAGAATTCTGTGGCACCTCTaGAGAACAAACCAGGCCTTG +
Preference number: 4 (lower is better)
Translates to: QPRPAHHRLDHQALDRGRILWHL*RTNQAL
Trigger: CAAGGCCTGGTTTGTTCTTCAGAGGTGCCACAGAAT...TCTGCCCCTGTCCAGTGCCTGGTGGTCCAGCCTGTGATGGGCAGGCCTAGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR TCA 90 bp GGTCCCGAGTGTGCAGGAAGGAGCTTTGGAAACATGTACAGGTGGGTCCCGAATCAGGCAAACCAGACCTaGGTGGGCGTGGCCAAGCCC +
Preference number: 4 (lower is better)
Translates to: GPECAGRSFGNMYRWVPNQANQT*VGVAKP
Trigger: GGGCTTGGCCACGCCCACTCAGGTCTGGTTTGCCTG...ATTCGGGACCCACCTGTACATGTTTCCAAAGCTCCTTCCTGCACACTCGGGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR TCA 90 bp CAGCCTAGGCCTGCCCATCACAGGCTGGACCACCAGGCACTGGACAGGGGCAGATCTTCCATAGGAACCTaGACTGAAAGGAAGGCAGCC +
Preference number: 4 (lower is better)
Translates to: QPRPAHHRLDHQALDRGRSSIGT*TERKAA
Trigger: GGCTGCCTTCCTTTCAGTTCAGGTTCCTATGGAAGA...TCTGCCCCTGTCCAGTGCCTGGTGGTCCAGCCTGTGATGGGCAGGCCTAGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR TCA 90 bp GGGGCAAGTGATGTGAATGAGGCTAGGGTCAGGGCCCGAGGGAATGCACAGACTGGCAGTGGGACAACATaGTTCCGGGATGCAGCCTGC +
Preference number: 4 (lower is better)
Translates to: GASDVNEARVRARGNAQTGSGTT*FRDAAC
Trigger: GCAGGCTGCATCCCGGAATCATGTTGTCCCACTGCC...AGTCTGTGCATTCCCTCGGGCCCTGACCCTAGCCTCATTCACATCACTTGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR GCA 90 bp TCGACAGGGGCAAGTGATGTGAATGAGGCTAGGGTCAGGGCCCGAGGGAATGCAAGGGAGGAGGAGAGCTaGTGCAGGTTCTCGCTCTCC +
Preference number: 4 (lower is better)
Translates to: STGASDVNEARVRARGNAREEES*CRFSLS
Trigger: GGAGAGCGAGAACCTGCAGCAGCTCTCCTCCTCCCT...TGCATTCCCTCGGGCCCTGACCCTAGCCTCATTCACATCACTTGCCCCTGTCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR GCA 90 bp CAGCCTAGGCCTGCCCATCACAGGCTGGACCACCAGGCACTGGACAGGGGCAGAGGCTGGGGAGCCTCATaGTTCCGCAAGTTACTTAAA +
Preference number: 4 (lower is better)
Translates to: QPRPAHHRLDHQALDRGRGWGAS*FRKLLK
Trigger: TTTAAGTAACTTGCGGAAGCATGAGGCTCCCCAGCC...TCTGCCCCTGTCCAGTGCCTGGTGGTCCAGCCTGTGATGGGCAGGCCTAGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR GCA 90 bp GCATCAGAAGAGCTGGGAAGCACGGCGCCCTCGGTGGACGCTGCCCCCTGCTGGGCTTCTGCTTGCAACTaGTTCACTTCCTTCCGTAAA +
Preference number: 4 (lower is better)
Translates to: ASEELGSTAPSVDAAPCWASACN*FTSFRK
Trigger: TTTACGGAAGGAAGTGAAGCAGTTGCAAGCAGAAGC...CCAGCAGGGGGCAGCGTCCACCGAGGGCGCCGTGCTTCCCAGCTCTTCTGATGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000590884.5
CDS-3UTR GCA 90 bp GACTTCCGGCCAAACCCAATTGCCCCCAGGATCCCAGAGCTGAGTCTCTCCTCACCGGCCAAACCCAATTaGCCCCAGGATCCCAGAGCT +
Preference number: 4 (lower is better)
Translates to: DFRPNPIAPRIPELSLSSPAKPN*PQDPRA
Trigger: AGCTCTGGGATCCTGGGGGCAATTGGGTTTGGCCGG...TGAGGAGAGACTCAGCTCTGGGATCCTGGGGGCAATTGGGTTTGGCCGGAAGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CCA 90 bp CAGCCTAGGCCTGCCCATCACAGGCTGGACCACCAGGCACTGGACAGGGGCAGAAAATGTTCTGGGTCTTaGAGCTGCTGCTTGCACTGG +
Preference number: 4 (lower is better)
Translates to: QPRPAHHRLDHQALDRGRKCSGS*SCCLHW
Trigger: CCAGTGCAAGCAGCAGCTCCAAGACCCAGAACATTT...TCTGCCCCTGTCCAGTGCCTGGTGGTCCAGCCTGTGATGGGCAGGCCTAGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CCA 90 bp GCAGCCCAGGGCTCTCAGAGTGGCCTTCCAACACTCGGGGCTCAGAAGCTGCTCAGCTTCAGCTGGGTCTaGGCTTTCTTCAGAGCTTGG +
Preference number: 4 (lower is better)
Translates to: AAQGSQSGLPTLGAQKLLSFSWV*AFFRAW
Trigger: CCAAGCTCTGAAGAAAGCCCAGACCCAGCTGAAGCT...GAGCAGCTTCTGAGCCCCGAGTGTTGGAAGGCCACTCTGAGAGCCCTGGGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000590884.5
CDS-3UTR CCA 90 bp CTCCATGAGCATCTGGTCAGGGTGCAGGTCCTTCCATGGCAGTTTCCGGTACGTAGAGCAAGGGGAGGCTaGGGAGCCTCATGCTTCCGC +
Preference number: 4 (lower is better)
Translates to: LHEHLVRVQVLPWQFPVRRARGG*GASCFR
Trigger: GCGGAAGCATGAGGCTCCCCAGCCTCCCCTTGCTCT...ACGTACCGGAAACTGCCATGGAAGGACCTGCACCCTGACCAGATGCTCATGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000592272.5
CDS-3UTR CCA 90 bp GCAGCCCAGGGCTCTCAGAGTGGCCTTCCAACACTCGGGGCTCAGAAGCTGCTCAGCAGAGGAAATAACTaGCACAGGAGGCTTCGTCGG +
Preference number: 4 (lower is better)
Translates to: AAQGSQSGLPTLGAQKLLSRGNN*HRRLRR
Trigger: CCGACGAAGCCTCCTGTGCCAGTTATTTCCTCTGCT...GAGCAGCTTCTGAGCCCCGAGTGTTGGAAGGCCACTCTGAGAGCCCTGGGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000590884.5
CDS-3UTR CCA 90 bp CATGCTGCGGGTTTCTGGGTGGGGACTGGAATTCCAGGCATCAGAGAGCACACTGTAGTCTCAGCCATGTaGCGGACGGACGCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: HAAGFWVGTGIPGIREHTVVSAM*RTDARL
Trigger: GAGCCTGGCGTCCGTCCGCCACATGGCTGAGACTAC...AGTGTGCTCTCTGATGCCTGGAATTCCAGTCCCCACCCAGAAACCCGCAGCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CCA 90 bp CAGCCTAGGCCTGCCCATCACAGGCTGGACCACCAGGCACTGGACAGGGGCAGAGAGCCTGCTGAGCTTTaGGGGTCAGATGTAATTCAG +
Preference number: 4 (lower is better)
Translates to: QPRPAHHRLDHQALDRGREPAEL*GSDVIQ
Trigger: CTGAATTACATCTGACCCCCAAAGCTCAGCAGGCTC...TCTGCCCCTGTCCAGTGCCTGGTGGTCCAGCCTGTGATGGGCAGGCCTAGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR TCA 90 bp CAGCCTAGGCCTGCCCATCACAGGCTGGACCACCAGGCACTGGACAGGGGCAGATGGTCAATGGTCTCTTaGACTCTATCCAGAAGGACG +
Preference number: 4 (lower is better)
Translates to: QPRPAHHRLDHQALDRGRWSMVS*TLSRRT
Trigger: CGTCCTTCTGGATAGAGTTCAAGAGACCATTGACCA...TCTGCCCCTGTCCAGTGCCTGGTGGTCCAGCCTGTGATGGGCAGGCCTAGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR TCA 90 bp GGAGGCAGACAATCATGCTGCGGGTTTCTGGGTGGGGACTGGAATTCCAGGCATTGCCTTGTTGGGGGATaGCGCTGCGTCTCATCGCTG +
Preference number: 4 (lower is better)
Translates to: GGRQSCCGFLGGDWNSRHCLVGG*RCVSSL
Trigger: CAGCGATGAGACGCAGCGTCATCCCCCAACAAGGCA...ATGCCTGGAATTCCAGTCCCCACCCAGAAACCCGCAGCATGATTGTCTGCCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR TCA 90 bp CAGCCTAGGCCTGCCCATCACAGGCTGGACCACCAGGCACTGGACAGGGGCAGAGGAAAGCGTACAGAATaGACTCTGGCATTTTGGGTG +
Preference number: 4 (lower is better)
Translates to: QPRPAHHRLDHQALDRGRGKRTE*TLAFWV
Trigger: CACCCAAAATGCCAGAGTTCATTCTGTACGCTTTCC...TCTGCCCCTGTCCAGTGCCTGGTGGTCCAGCCTGTGATGGGCAGGCCTAGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR TCA 90 bp CAGCCTAGGCCTGCCCATCACAGGCTGGACCACCAGGCACTGGACAGGGGCAGAGCGGGTAATGGCTGCTaGAATAACTTAGCACACTCT +
Preference number: 4 (lower is better)
Translates to: QPRPAHHRLDHQALDRGRAGNGC*NNLAHS
Trigger: AGAGTGTGCTAAGTTATTTCAGCAGCCATTACCCGC...TCTGCCCCTGTCCAGTGCCTGGTGGTCCAGCCTGTGATGGGCAGGCCTAGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR TCA 90 bp AGCAGCCCAGGGCTCTCAGAGTGGCCTTCCAACACTCGGGGCTCAGAAGCTGCTATTCTTTTGCCAGGATaGTGGACGGCGGGTAATGGC +
Preference number: 4 (lower is better)
Translates to: SSPGLSEWPSNTRGSEAAILLPG*WTAGNG
Trigger: GCCATTACCCGCCGTCCATCATCCTGGCAAAAGAAT...AGCAGCTTCTGAGCCCCGAGTGTTGGAAGGCCACTCTGAGAGCCCTGGGCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000590884.5
CDS-3UTR TCA 90 bp GGGGCAAGTGATGTGAATGAGGCTAGGGTCAGGGCCCGAGGGAATGCACAGACTGGAACTCTTCCATGGTaGGCTCGGGAACCTGAAGGG +
Preference number: 4 (lower is better)
Translates to: GASDVNEARVRARGNAQTGTLPW*AREPEG
Trigger: CCCTTCAGGTTCCCGAGCTCACCATGGAAGAGTTCC...AGTCTGTGCATTCCCTCGGGCCCTGACCCTAGCCTCATTCACATCACTTGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR TCA 90 bp CAGCCTAGGCCTGCCCATCACAGGCTGGACCACCAGGCACTGGACAGGGGCAGATTGTTAGGCCTGTCATaGAGATGTGGGGTGAGATCT +
Preference number: 4 (lower is better)
Translates to: QPRPAHHRLDHQALDRGRLLGLS*RCGVRS
Trigger: AGATCTCACCCCACATCTTCATGACAGGCCTAACAA...TCTGCCCCTGTCCAGTGCCTGGTGGTCCAGCCTGTGATGGGCAGGCCTAGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR GCA 90 bp ATTAATAGGCAGTGGGACAACATGATTCCGGGATGCAGCCTGCCTCTGCAACCCGGGTCTTGGAGCTGCTaGTTGCACTGGGCGGGCTGC +
Preference number: 4 (lower is better)
Translates to: INRQWDNMIPGCSLPLQPGSWSC*LHWAGC
Trigger: GCAGCCCGCCCAGTGCAAGCAGCAGCTCCAAGACCC...GGGTTGCAGAGGCAGGCTGCATCCCGGAATCATGTTGTCCCACTGCCTATTAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR GCA 90 bp TTCTGGCTGTCAGTAGGAATAGAAAGGCCCGCAGACACTTTTAGGAGCTTCATGGCCCTCGGTGGACGCTaGCCCCTGCTGGCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: FWLSVGIERPADTFRSFMALGGR*PLLAAG
Trigger: CCCAGCTGCCAGCAGGGGGCAGCGTCCACCGAGGGC...CATGAAGCTCCTAAAAGTGTCTGCGGGCCTTTCTATTCCTACTGACAGCCAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR GCA 90 bp CAGCCTAGGCCTGCCCATCACAGGCTGGACCACCAGGCACTGGACAGGGGCAGAGCAGTTTCCGGTACGTaGTATGGAAAGCGTACAGAA +
Preference number: 4 (lower is better)
Translates to: QPRPAHHRLDHQALDRGRAVSGT*YGKRTE
Trigger: TTCTGTACGCTTTCCATAGCACGTACCGGAAACTGC...TCTGCCCCTGTCCAGTGCCTGGTGGTCCAGCCTGTGATGGGCAGGCCTAGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR GCA 90 bp CGGTTCTGGCCTGCTGTTGCAACAGATTCAGGTCTGTGCACACCAGCTGGGTGGGGAGGCAGACAATCATaGTGCGGGTTTCTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: RFWPAVATDSGLCTPAGWGGRQS*CGFLGG
Trigger: CCCACCCAGAAACCCGCAGCATGATTGTCTGCCTCC...CCACCCAGCTGGTGTGCACAGACCTGAATCTGTTGCAACAGCAGGCCAGAACCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587884.1
CDS-3UTR GCA 90 bp CAGCCTAGGCCTGCCCATCACAGGCTGGACCACCAGGCACTGGACAGGGGCAGAAGCATAAGATTCTTTTaGCAGGATGATGGACGGCGG +
Preference number: 4 (lower is better)
Translates to: QPRPAHHRLDHQALDRGRSIRFF*QDDGRR
Trigger: CCGCCGTCCATCATCCTGGCAAAAGAATCTTATGCT...TCTGCCCCTGTCCAGTGCCTGGTGGTCCAGCCTGTGATGGGCAGGCCTAGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR GCA 90 bp TCTGTAGTCTCAGCCATGTGGCGGACGGACGCCAGGCTCTGGCAGGCTGCTGTTGCCCCGAAGGAACTCTaGTGTTGGAATAGTCGCGTT +
Preference number: 4 (lower is better)
Translates to: SVVSAMWRTDARLWQAAVAPKEL*CWNSRV
Trigger: AACGCGACTATTCCAACAGCAGAGTTCCTTCGGGGC...AACAGCAGCCTGCCAGAGCCTGGCGTCCGTCCGCCACATGGCTGAGACTACAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR GCA 90 bp GCAGCCCAGGGCTCTCAGAGTGGCCTTCCAACACTCGGGGCTCAGAAGCTGCTCCCACAAAAACAGCTTTaGCTCTTCCTCCACGGAGCT +
Preference number: 4 (lower is better)
Translates to: AAQGSQSGLPTLGAQKLLPQKQL*LFLHGA
Trigger: AGCTCCGTGGAGGAAGAGGCAAAGCTGTTTTTGTGG...GAGCAGCTTCTGAGCCCCGAGTGTTGGAAGGCCACTCTGAGAGCCCTGGGCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000590884.5
CDS-3UTR GCA 90 bp GTCCCGAGTGTGCAGGAAGGAGCTTTGGAAACATGTACAGGTGGGTCCCGAATCGTGAAGTCTGGAGCCTaGAGCCGTTCGCCCTCCACG +
Preference number: 4 (lower is better)
Translates to: VPSVQEGALETCTGGSRIVKSGA*SRSPST
Trigger: CGTGGAGGGCGAACGGCTGCAGGCTCCAGACTTCAC...GATTCGGGACCCACCTGTACATGTTTCCAAAGCTCCTTCCTGCACACTCGGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR GCA 90 bp GGGGCAAGTGATGTGAATGAGGCTAGGGTCAGGGCCCGAGGGAATGCACAGACTCCGAGACCATGCCATTaGACTCCAGCCTGGGTGACA +
Preference number: 4 (lower is better)
Translates to: GASDVNEARVRARGNAQTPRPCH*TPAWVT
Trigger: TGTCACCCAGGCTGGAGTGCAATGGCATGGTCTCGG...AGTCTGTGCATTCCCTCGGGCCCTGACCCTAGCCTCATTCACATCACTTGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR GCA 90 bp TCGACAGGGGCAAGTGATGTGAATGAGGCTAGGGTCAGGGCCCGAGGGAATGCACTTGGACCACACTGGTaGGACTCTAACCCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: STGASDVNEARVRARGNALGPHW*DSNPRA
Trigger: AGCCCTGGGGTTAGAGTCGCACCAGTGTGGTCCAAG...TGCATTCCCTCGGGCCCTGACCCTAGCCTCATTCACATCACTTGCCCCTGTCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CCA 90 bp TCGACAGGGGCAAGTGATGTGAATGAGGCTAGGGTCAGGGCCCGAGGGAATGCATCCAGGGTGGACCTTTaGAGTGACTGCACTGTCCCC +
Preference number: 4 (lower is better)
Translates to: STGASDVNEARVRARGNASRVDL*SDCTVP
Trigger: GGGGACAGTGCAGTCACTCCAAAGGTCCACCCTGGA...TGCATTCCCTCGGGCCCTGACCCTAGCCTCATTCACATCACTTGCCCCTGTCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CCA 90 bp ACACTCGGGGCTCAGAAGCTGCTCCGCGGAGCTTTGCATAAGCAGCCTGAGAATGGAGGGATGGCACGATaGGGAGCTTCAGCTGGGTCT +
Preference number: 4 (lower is better)
Translates to: TLGAQKLLRGALHKQPENGGMAR*GASAGS
Trigger: AGACCCAGCTGAAGCTCCCCATCGTGCCATCCCTCC...ATTCTCAGGCTGCTTATGCAAAGCTCCGCGGAGCAGCTTCTGAGCCCCGAGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000590884.5
CDS-3UTR CCA 90 bp GCATCAGAAGAGCTGGGAAGCACGGCGCCCTCGGTGGACGCTGCCCCCTGCTGGCAATACAACCATCTATaGGTAACCCATACTGTGGTC +
Preference number: 4 (lower is better)
Translates to: ASEELGSTAPSVDAAPCWQYNHL*VTHTVV
Trigger: GACCACAGTATGGGTTACCCATAGATGGTTGTATTG...CCAGCAGGGGGCAGCGTCCACCGAGGGCGCCGTGCTTCCCAGCTCTTCTGATGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000590884.5
CDS-3UTR CCA 90 bp GGTCCCGAGTGTGCAGGAAGGAGCTTTGGAAACATGTACAGGTGGGTCCCGAATCCAGGGGTGCCAGAGTaGCTCTCTGGCAGCCCTTCA +
Preference number: 4 (lower is better)
Translates to: GPECAGRSFGNMYRWVPNPGVPE*LSGSPS
Trigger: TGAAGGGCTGCCAGAGAGCCACTCTGGCACCCCTGG...ATTCGGGACCCACCTGTACATGTTTCCAAAGCTCCTTCCTGCACACTCGGGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CCA 90 bp AGCAGCCCAGGGCTCTCAGAGTGGCCTTCCAACACTCGGGGCTCAGAAGCTGCTTGCACACCAGCTGGGTaGCGTCCTTCTGACTCAATA +
Preference number: 4 (lower is better)
Translates to: SSPGLSEWPSNTRGSEAACTPAG*RPSDSI
Trigger: TATTGAGTCAGAAGGACGCCACCCAGCTGGTGTGCA...AGCAGCTTCTGAGCCCCGAGTGTTGGAAGGCCACTCTGAGAGCCCTGGGCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000590884.5
CDS-3UTR CCA 90 bp AGGCAGACAATCATGCTGCGGGTTTCTGGGTGGGGACTGGAATTCCAGGCATCAGAGCATCAGAAGAGCTaGGAAGCACGGCGCCCTCGG +
Preference number: 4 (lower is better)
Translates to: RQTIMLRVSGWGLEFQASEHQKS*EARRPR
Trigger: CCGAGGGCGCCGTGCTTCCCAGCTCTTCTGATGCTC...TGATGCCTGGAATTCCAGTCCCCACCCAGAAACCCGCAGCATGATTGTCTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CCA 90 bp GGGGCAAGTGATGTGAATGAGGCTAGGGTCAGGGCCCGAGGGAATGCACAGACTACGGACGCCAGGCTCTaGCAGGCTGCTGTTAAAAGG +
Preference number: 4 (lower is better)
Translates to: GASDVNEARVRARGNAQTTDARL*QAAVKR
Trigger: CCTTTTAACAGCAGCCTGCCAGAGCCTGGCGTCCGT...AGTCTGTGCATTCCCTCGGGCCCTGACCCTAGCCTCATTCACATCACTTGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CCA 90 bp GTCCCGAGTGTGCAGGAAGGAGCTTTGGAAACATGTACAGGTGGGTCCCGAATCGTAGTCTCAGCCATGTaGCGGACGGACGCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: VPSVQEGALETCTGGSRIVVSAM*RTDARL
Trigger: GAGCCTGGCGTCCGTCCGCCACATGGCTGAGACTAC...GATTCGGGACCCACCTGTACATGTTTCCAAAGCTCCTTCCTGCACACTCGGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CCA 90 bp GGGGCAAGTGATGTGAATGAGGCTAGGGTCAGGGCCCGAGGGAATGCACAGACTTCCCGATGCCACTGTTaGCCACCCTGTGGTGAAGTC +
Preference number: 4 (lower is better)
Translates to: GASDVNEARVRARGNAQTSRCHC*PPCGEV
Trigger: GACTTCACCACAGGGTGGCCAACAGTGGCATCGGGA...AGTCTGTGCATTCCCTCGGGCCCTGACCCTAGCCTCATTCACATCACTTGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CCA 90 bp GTCCCGAGTGTGCAGGAAGGAGCTTTGGAAACATGTACAGGTGGGTCCCGAATCTGGACCACCAGGCACTaGACAGGGGCAGAGGAGAGG +
Preference number: 4 (lower is better)
Translates to: VPSVQEGALETCTGGSRIWTTRH*TGAEER
Trigger: CCTCTCCTCTGCCCCTGTCCAGTGCCTGGTGGTCCA...GATTCGGGACCCACCTGTACATGTTTCCAAAGCTCCTTCCTGCACACTCGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CCA 90 bp GGGGCAAGTGATGTGAATGAGGCTAGGGTCAGGGCCCGAGGGAATGCACAGACTCCACTTGGACCACACTaGTGCGACTCTAACCCCAGG +
Preference number: 4 (lower is better)
Translates to: GASDVNEARVRARGNAQTPLGPH*CDSNPR
Trigger: CCTGGGGTTAGAGTCGCACCAGTGTGGTCCAAGTGG...AGTCTGTGCATTCCCTCGGGCCCTGACCCTAGCCTCATTCACATCACTTGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR TCA 90 bp TTAGACAAAGGCGACTTCCGGCCAAACCCAATTGCCCCCAGGATCCCAGAGCTGTCCAGAGCAACCTGCTaGGATTCCCGAAGAGCTGCG +
Preference number: 4 (lower is better)
Translates to: LDKGDFRPNPIAPRIPELSRATC*DSRRAA
Trigger: CGCAGCTCTTCGGGAATCTCAGCAGGTTGCTCTGGA...CAGCTCTGGGATCCTGGGGGCAATTGGGTTTGGCCGGAAGTCGCCTTTGTCTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR TCA 90 bp CACTTTGAAGAAGGCCTCCATGAGCATCTGGTCAGGGTGCAGGTCCTTCCATGGTGCCTTGTTGGGGGATaGCGCTGCGTCTCATCGCTG +
Preference number: 4 (lower is better)
Translates to: HFEEGLHEHLVRVQVLPWCLVGG*RCVSSL
Trigger: CAGCGATGAGACGCAGCGTCATCCCCCAACAAGGCA...CCATGGAAGGACCTGCACCCTGACCAGATGCTCATGGAGGCCTTCTTCAAAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000592272.5
CDS-3UTR TCA 90 bp GCATCAGAAGAGCTGGGAAGCACGGCGCCCTCGGTGGACGCTGCCCCCTGCTGGCTAGGACTGCTAAGGTaGTTTTTCCATTTTGTTCCA +
Preference number: 4 (lower is better)
Translates to: ASEELGSTAPSVDAAPCWLGLLR*FFHFVP
Trigger: TGGAACAAAATGGAAAAATCACCTTAGCAGTCCTAG...CCAGCAGGGGGCAGCGTCCACCGAGGGCGCCGTGCTTCCCAGCTCTTCTGATGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000590884.5
CDS-3UTR TCA 90 bp GACTTCCGGCCAAACCCAATTGCCCCCAGGATCCCAGAGCTGAGTCTCTCCTCAGTGAGCTCGGGAACCTaGAGGGATACCAGAATGGGT +
Preference number: 4 (lower is better)
Translates to: DFRPNPIAPRIPELSLSSVSSGT*RDTRMG
Trigger: ACCCATTCTGGTATCCCTTCAGGTTCCCGAGCTCAC...TGAGGAGAGACTCAGCTCTGGGATCCTGGGGGCAATTGGGTTTGGCCGGAAGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR TCA 90 bp GGGGCAAGTGATGTGAATGAGGCTAGGGTCAGGGCCCGAGGGAATGCACAGACTGTGAGCTCGGGAACCTaGAGGGATACCAGAATGGGT +
Preference number: 4 (lower is better)
Translates to: GASDVNEARVRARGNAQTVSSGT*RDTRMG
Trigger: ACCCATTCTGGTATCCCTTCAGGTTCCCGAGCTCAC...AGTCTGTGCATTCCCTCGGGCCCTGACCCTAGCCTCATTCACATCACTTGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR TCA 90 bp CAGCCTAGGCCTGCCCATCACAGGCTGGACCACCAGGCACTGGACAGGGGCAGAACAAGGTCAGGAGTTTaGAACCAGCTTGTCTCAATG +
Preference number: 4 (lower is better)
Translates to: QPRPAHHRLDHQALDRGRTRSGV*NQLVSM
Trigger: CATTGAGACAAGCTGGTTTCAAACTCCTGACCTTGT...TCTGCCCCTGTCCAGTGCCTGGTGGTCCAGCCTGTGATGGGCAGGCCTAGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR TCA 90 bp CAGCCTAGGCCTGCCCATCACAGGCTGGACCACCAGGCACTGGACAGGGGCAGAGCTACTATCTCAAAATaGGCTGTACAGTTGGCCCAA +
Preference number: 4 (lower is better)
Translates to: QPRPAHHRLDHQALDRGRATISK*AVQLAQ
Trigger: TTGGGCCAACTGTACAGCTCATTTTGAGATAGTAGC...TCTGCCCCTGTCCAGTGCCTGGTGGTCCAGCCTGTGATGGGCAGGCCTAGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR TCA 90 bp GTCCCGAGTGTGCAGGAAGGAGCTTTGGAAACATGTACAGGTGGGTCCCGAATCGCTACTCCTGGACACTaGTGCCCGAGGCATGCTGTG +
Preference number: 4 (lower is better)
Translates to: VPSVQEGALETCTGGSRIATPGH*CPRHAV
Trigger: CACAGCATGCCTCGGGCATCAGTGTCCAGGAGTAGC...GATTCGGGACCCACCTGTACATGTTTCCAAAGCTCCTTCCTGCACACTCGGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR GCA 90 bp GTCCCGAGTGTGCAGGAAGGAGCTTTGGAAACATGTACAGGTGGGTCCCGAATCCTGGCTCCTGTCAGGTaGTGTGCCACCTTGTGGGTG +
Preference number: 4 (lower is better)
Translates to: VPSVQEGALETCTGGSRILAPVR*CATLWV
Trigger: CACCCACAAGGTGGCACAGCACCTGACAGGAGCCAG...GATTCGGGACCCACCTGTACATGTTTCCAAAGCTCCTTCCTGCACACTCGGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR GCA 90 bp GGCCTGCTGTTGCAACAGATTCAGGTCTGTGCACACCAGCTGGGTGGCGTCCTTGAACACGGAGGGCCTTaGTTGCAGCATGGTGGAAGT +
Preference number: 4 (lower is better)
Translates to: GLLLQQIQVCAHQLGGVLEHGGP*LQHGGS
Trigger: ACTTCCACCATGCTGCAAGCAAGGCCCTCCGTGTTC...AAGGACGCCACCCAGCTGGTGTGCACAGACCTGAATCTGTTGCAACAGCAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587884.1
CDS-3UTR GCA 90 bp GTCCCGAGTGTGCAGGAAGGAGCTTTGGAAACATGTACAGGTGGGTCCCGAATCCCCTTCACTGCCCTCTaGTGGAACACGGAGGGCCTT +
Preference number: 4 (lower is better)
Translates to: VPSVQEGALETCTGGSRIPFTAL*WNTEGL
Trigger: AAGGCCCTCCGTGTTCCAGCAGAGGGCAGTGAAGGG...GATTCGGGACCCACCTGTACATGTTTCCAAAGCTCCTTCCTGCACACTCGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR GCA 90 bp GGGTGCAGGTCCTTCCATGGCAGTTTCCGGTACGTGCTATGGAAAGCGTACAGACCCTTCACTGCCCTCTaGTGGAACACGGAGGGCCTT +
Preference number: 4 (lower is better)
Translates to: GCRSFHGSFRYVLWKAYRPFTAL*WNTEGL
Trigger: AAGGCCCTCCGTGTTCCAGCAGAGGGCAGTGAAGGG...TCTGTACGCTTTCCATAGCACGTACCGGAAACTGCCATGGAAGGACCTGCACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000592272.5
CDS-3UTR GCA 90 bp ACACTCGGGGCTCAGAAGCTGCTCCGCGGAGCTTTGCATAAGCAGCCTGAGAATTCAGGTAACCAGGGGTaGCAGAGTGGCTCTCTGGCA +
Preference number: 4 (lower is better)
Translates to: TLGAQKLLRGALHKQPENSGNQG*QSGSLA
Trigger: TGCCAGAGAGCCACTCTGGCACCCCTGGTTACCTGA...ATTCTCAGGCTGCTTATGCAAAGCTCCGCGGAGCAGCTTCTGAGCCCCGAGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000590884.5
CDS-3UTR GCA 90 bp GGAGGCAGACAATCATGCTGCGGGTTTCTGGGTGGGGACTGGAATTCCAGGCATTCAGGTAACCAGGGGTaGCAGAGTGGCTCTCTGGCA +
Preference number: 4 (lower is better)
Translates to: GGRQSCCGFLGGDWNSRHSGNQG*QSGSLA
Trigger: TGCCAGAGAGCCACTCTGGCACCCCTGGTTACCTGA...ATGCCTGGAATTCCAGTCCCCACCCAGAAACCCGCAGCATGATTGTCTGCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR GCA 90 bp AGCAGCCCAGGGCTCTCAGAGTGGCCTTCCAACACTCGGGGCTCAGAAGCTGCTCTGAACCGTGACAACTaGGGCTCCTTGGCATTTCTT +
Preference number: 4 (lower is better)
Translates to: SSPGLSEWPSNTRGSEAALNRDN*GSLAFL
Trigger: AAGAAATGCCAAGGAGCCGCAGTTGTCACGGTTCAG...AGCAGCTTCTGAGCCCCGAGTGTTGGAAGGCCACTCTGAGAGCCCTGGGCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000590884.5
CDS-3UTR GCA 90 bp CAGCCTAGGCCTGCCCATCACAGGCTGGACCACCAGGCACTGGACAGGGGCAGATTAGCAGCTTCTGCTTaGAACTGCTTCACTTCCTTC +
Preference number: 4 (lower is better)
Translates to: QPRPAHHRLDHQALDRGRLAASA*NCFTSF
Trigger: GAAGGAAGTGAAGCAGTTGCAAGCAGAAGCTGCTAA...TCTGCCCCTGTCCAGTGCCTGGTGGTCCAGCCTGTGATGGGCAGGCCTAGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR GCA 90 bp GCGGGTTTCTGGGTGGGGACTGGAATTCCAGGCATCAGAGAGCACACTAACCCATCGGGGCTCAGAAGCTaGTCCGCGGAGCTTTGCATA +
Preference number: 4 (lower is better)
Translates to: AGFWVGTGIPGIREHTNPSGLRS*SAELCI
Trigger: TATGCAAAGCTCCGCGGAGCAGCTTCTGAGCCCCGA...TGGGTTAGTGTGCTCTCTGATGCCTGGAATTCCAGTCCCCACCCAGAAACCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR GCA 90 bp GTCCCGAATCCACTGCTACTGTCATGCTATGTAGACAGTTGTGTAGACACATCTGCCCTCGGTGGACGCTaGCCCCTGCTGGCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: VPNPLLLSCYVDSCVDTSALGGR*PLLAAG
Trigger: CCCAGCTGCCAGCAGGGGGCAGCGTCCACCGAGGGC...AGATGTGTCTACACAACTGTCTACATAGCATGACAGTAGCAGTGGATTCGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR GCA 90 bp TTTTGGGTGCTGTACATGCTTCACAATAATGCATCAGGTGCAACCAAAGGGCTCGCCCTCGGTGGACGCTaGCCCCTGCTGGCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: FWVLYMLHNNASGATKGLALGGR*PLLAAG
Trigger: CCCAGCTGCCAGCAGGGGGCAGCGTCCACCGAGGGC...GAGCCCTTTGGTTGCACCTGATGCATTATTGTGAAGCATGTACAGCACCCAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000592272.5
CDS-3UTR GCA 90 bp CTCCATGAGCATCTGGTCAGGGTGCAGGTCCTTCCATGGCAGTTTCCGGTACGTTCCAGGTCCGGATACTaGCCCGAAGGAACTCTGCTG +
Preference number: 4 (lower is better)
Translates to: LHEHLVRVQVLPWQFPVRSRSGY*PEGTLL
Trigger: CAGCAGAGTTCCTTCGGGGCAGTATCCGGACCTGGA...ACGTACCGGAAACTGCCATGGAAGGACCTGCACCCTGACCAGATGCTCATGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000592272.5
CDS-3UTR GCA 90 bp GGGGCAAGTGATGTGAATGAGGCTAGGGTCAGGGCCCGAGGGAATGCACAGACTGCCACTAGCTTAATGTaGCTCCCATGGGGCACAGCT +
Preference number: 4 (lower is better)
Translates to: GASDVNEARVRARGNAQTATSLM*LPWGTA
Trigger: AGCTGTGCCCCATGGGAGGCACATTAAGCTAGTGGC...AGTCTGTGCATTCCCTCGGGCCCTGACCCTAGCCTCATTCACATCACTTGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR GCA 90 bp TCGACAGGGGCAAGTGATGTGAATGAGGCTAGGGTCAGGGCCCGAGGGAATGCAGCCACTAGCTTAATGTaGCTCCCATGGGGCACAGCT +
Preference number: 4 (lower is better)
Translates to: STGASDVNEARVRARGNAATSLM*LPWGTA
Trigger: AGCTGTGCCCCATGGGAGGCACATTAAGCTAGTGGC...TGCATTCCCTCGGGCCCTGACCCTAGCCTCATTCACATCACTTGCCCCTGTCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CCA 90 bp CAGCCTAGGCCTGCCCATCACAGGCTGGACCACCAGGCACTGGACAGGGGCAGATCTGAAAACCATGTTTaGCTGGGCAAGAACTCTGCA +
Preference number: 4 (lower is better)
Translates to: QPRPAHHRLDHQALDRGRSENHV*LGKNSA
Trigger: TGCAGAGTTCTTGCCCAGCCAAACATGGTTTTCAGA...TCTGCCCCTGTCCAGTGCCTGGTGGTCCAGCCTGTGATGGGCAGGCCTAGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CCA 90 bp CAGCCTAGGCCTGCCCATCACAGGCTGGACCACCAGGCACTGGACAGGGGCAGAAAATTCCAGGCCCATTaGTTAAATGAGGTCTCGGGT +
Preference number: 4 (lower is better)
Translates to: QPRPAHHRLDHQALDRGRKFQAH*LNEVSG
Trigger: ACCCGAGACCTCATTTAACCAATGGGCCTGGAATTT...TCTGCCCCTGTCCAGTGCCTGGTGGTCCAGCCTGTGATGGGCAGGCCTAGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CCA 90 bp CAGCCTAGGCCTGCCCATCACAGGCTGGACCACCAGGCACTGGACAGGGGCAGAGCTGCTTTACACAAGTaGTCCATGAGGAAGAGGATA +
Preference number: 4 (lower is better)
Translates to: QPRPAHHRLDHQALDRGRAALHK*SMRKRI
Trigger: TATCCTCTTCCTCATGGACCACTTGTGTAAAGCAGC...TCTGCCCCTGTCCAGTGCCTGGTGGTCCAGCCTGTGATGGGCAGGCCTAGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CCA 90 bp GGGTGCAGGTCCTTCCATGGCAGTTTCCGGTACGTGCTATGGAAAGCGTACAGAAGACCTGAGTGGGCGTaGCCAAGCCCTCCACAAAGG +
Preference number: 4 (lower is better)
Translates to: GCRSFHGSFRYVLWKAYRRPEWA*PSPPQR
Trigger: CCTTTGTGGAGGGCTTGGCCACGCCCACTCAGGTCT...TCTGTACGCTTTCCATAGCACGTACCGGAAACTGCCATGGAAGGACCTGCACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000592272.5
CDS-3UTR CCA 90 bp GGTCCCGAGTGTGCAGGAAGGAGCTTTGGAAACATGTACAGGTGGGTCCCGAATGGAGGGATGGCACGATaGGGAGCTTCAGCTGGGTCT +
Preference number: 4 (lower is better)
Translates to: GPECAGRSFGNMYRWVPNGGMAR*GASAGS
Trigger: AGACCCAGCTGAAGCTCCCCATCGTGCCATCCCTCC...ATTCGGGACCCACCTGTACATGTTTCCAAAGCTCCTTCCTGCACACTCGGGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CCA 90 bp GTCAGGGTGCAGGTCCTTCCATGGCAGTTTCCGGTACGTGCTATGGAAAGCGTAGGAGGGATGGCACGATaGGGAGCTTCAGCTGGGTCT +
Preference number: 4 (lower is better)
Translates to: VRVQVLPWQFPVRAMESVGGMAR*GASAGS
Trigger: AGACCCAGCTGAAGCTCCCCATCGTGCCATCCCTCC...TACGCTTTCCATAGCACGTACCGGAAACTGCCATGGAAGGACCTGCACCCTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000592272.5
CDS-3UTR CCA 90 bp GGGGCAAGTGATGTGAATGAGGCTAGGGTCAGGGCCCGAGGGAATGCACAGACTCTGCAGGGTGTGGAATaGGACTCAAGCTTGGCCTGT +
Preference number: 4 (lower is better)
Translates to: GASDVNEARVRARGNAQTLQGVE*DSSLAC
Trigger: ACAGGCCAAGCTTGAGTCCCATTCCACACCCTGCAG...AGTCTGTGCATTCCCTCGGGCCCTGACCCTAGCCTCATTCACATCACTTGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CCA 90 bp GGGGCAAGTGATGTGAATGAGGCTAGGGTCAGGGCCCGAGGGAATGCACAGACTGTGCAGGTCCTTCCATaGCAGTTTCCGGTACGTGCT +
Preference number: 4 (lower is better)
Translates to: GASDVNEARVRARGNAQTVQVLP*QFPVRA
Trigger: AGCACGTACCGGAAACTGCCATGGAAGGACCTGCAC...AGTCTGTGCATTCCCTCGGGCCCTGACCCTAGCCTCATTCACATCACTTGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CCA 90 bp ACACTCGGGGCTCAGAAGCTGCTCCGCGGAGCTTTGCATAAGCAGCCTGAGAATCTGCGGGTTTCTGGGTaGGGACTGGAATTCCAGGCA +
Preference number: 4 (lower is better)
Translates to: TLGAQKLLRGALHKQPENLRVSG*GLEFQA
Trigger: TGCCTGGAATTCCAGTCCCCACCCAGAAACCCGCAG...ATTCTCAGGCTGCTTATGCAAAGCTCCGCGGAGCAGCTTCTGAGCCCCGAGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000590884.5
CDS-3UTR TCA 90 bp CATTCGGCAACTGTGAGTGGCTCTGCACCCAAGTGGAACTTAGTAAGTTTCTCTCCCAGACCCAGGCCCTaGGGAGGATGGCTTCCGCTC +
Preference number: 4 (lower is better)
Translates to: HSATVSGSAPKWNLVSFSPRPRP*GGWLPL
Trigger: GAGCGGAAGCCATCCTCCTCAGGGCCTGGGTCTGGG...AGAGAAACTTACTAAGTTCCACTTGGGTGCAGAGCCACTCACAGTTGCCGAATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR TCA 90 bp TCGACAGGGGCAAGTGATGTGAATGAGGCTAGGGTCAGGGCCCGAGGGAATGCATCTCCACCTGGTGCATaGGGTAGAAGAGCTTCCACA +
Preference number: 4 (lower is better)
Translates to: STGASDVNEARVRARGNASPPGA*GRRAST
Trigger: TGTGGAAGCTCTTCTACCTCATGCACCAGGTGGAGA...TGCATTCCCTCGGGCCCTGACCCTAGCCTCATTCACATCACTTGCCCCTGTCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR TCA 90 bp TCGACAGGGGCAAGTGATGTGAATGAGGCTAGGGTCAGGGCCCGAGGGAATGCAGCCTTCAAGAGAGGATaGAACGTGGGTGACTCTGTC +
Preference number: 4 (lower is better)
Translates to: STGASDVNEARVRARGNAAFKRG*NVGDSV
Trigger: GACAGAGTCACCCACGTTTCATCCTCTCTTGAAGGC...TGCATTCCCTCGGGCCCTGACCCTAGCCTCATTCACATCACTTGCCCCTGTCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR TCA 90 bp GGTCCCGAGTGTGCAGGAAGGAGCTTTGGAAACATGTACAGGTGGGTCCCGAATAGTGGCAGGAGGGGGTaGTCAGAAGGTGTGACCAGA +
Preference number: 4 (lower is better)
Translates to: GPECAGRSFGNMYRWVPNSGRRG*SEGVTR
Trigger: TCTGGTCACACCTTCTGATCACCCCCTCCTGCCACT...ATTCGGGACCCACCTGTACATGTTTCCAAAGCTCCTTCCTGCACACTCGGGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR TCA 90 bp TCGACAGGGGCAAGTGATGTGAATGAGGCTAGGGTCAGGGCCCGAGGGAATGCAAGAACTTCTGCCAAATaGGTGGCAGGAGGGGGTGAT +
Preference number: 4 (lower is better)
Translates to: STGASDVNEARVRARGNARTSAK*VAGGGD
Trigger: ATCACCCCCTCCTGCCACTCATTTGGCAGAAGTTCT...TGCATTCCCTCGGGCCCTGACCCTAGCCTCATTCACATCACTTGCCCCTGTCGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR TCA 90 bp GGGGCAAGTGATGTGAATGAGGCTAGGGTCAGGGCCCGAGGGAATGCACAGACTTGTGGTCCCGGACGGTaGAGATACAGAAGGAAGAAC +
Preference number: 4 (lower is better)
Translates to: GASDVNEARVRARGNAQTCGPGR*RYRRKN
Trigger: GTTCTTCCTTCTGTATCTTCACCGTCCGGGACCACA...AGTCTGTGCATTCCCTCGGGCCCTGACCCTAGCCTCATTCACATCACTTGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR TCA 90 bp CTCCATGAGCATCTGGTCAGGGTGCAGGTCCTTCCATGGCAGTTTCCGGTACGTCCAGCAAAGGATCAGTaGAGTCCAGCTGCACGGACA +
Preference number: 4 (lower is better)
Translates to: LHEHLVRVQVLPWQFPVRPAKDQ*SPAART
Trigger: TGTCCGTGCAGCTGGACTTCACTGATCCTTTGCTGG...ACGTACCGGAAACTGCCATGGAAGGACCTGCACCCTGACCAGATGCTCATGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000592272.5
CDS-3UTR TCA 90 bp CATGCTGCGGGTTTCTGGGTGGGGACTGGAATTCCAGGCATCAGAGAGCACACTTGGGTGGCGTCCTTCTaGCTCAATAGCACAGCAGAG +
Preference number: 4 (lower is better)
Translates to: HAAGFWVGTGIPGIREHTWVASF*LNSTAE
Trigger: CTCTGCTGTGCTATTGAGTCAGAAGGACGCCACCCA...AGTGTGCTCTCTGATGCCTGGAATTCCAGTCCCCACCCAGAAACCCGCAGCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR TCA 90 bp TCGACAGGGGCAAGTGATGTGAATGAGGCTAGGGTCAGGGCCCGAGGGAATGCAATTCTTTTGCCAGGATaGTGGACGGCGGGTAATGGC +
Preference number: 4 (lower is better)
Translates to: STGASDVNEARVRARGNAILLPG*WTAGNG
Trigger: GCCATTACCCGCCGTCCATCATCCTGGCAAAAGAAT...TGCATTCCCTCGGGCCCTGACCCTAGCCTCATTCACATCACTTGCCCCTGTCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR TCA 90 bp CATGCTGCGGGTTTCTGGGTGGGGACTGGAATTCCAGGCATCAGAGAGCACACTAGTAACTGCCCAAGGTaGGGCACTCCTGCAGGAACT +
Preference number: 4 (lower is better)
Translates to: HAAGFWVGTGIPGIREHTSNCPR*GTPAGT
Trigger: AGTTCCTGCAGGAGTGCCTCACCTTGGGCAGTTACT...AGTGTGCTCTCTGATGCCTGGAATTCCAGTCCCCACCCAGAAACCCGCAGCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR TCA 90 bp GGGGCAAGTGATGTGAATGAGGCTAGGGTCAGGGCCCGAGGGAATGCACAGACTCCAACCTCAAAGAAGTaGGAGACGCAGGCACACAAC +
Preference number: 4 (lower is better)
Translates to: GASDVNEARVRARGNAQTPTSKK*ETQAHN
Trigger: GTTGTGTGCCTGCGTCTCTCACTTCTTTGAGGTTGG...AGTCTGTGCATTCCCTCGGGCCCTGACCCTAGCCTCATTCACATCACTTGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR GCA 90 bp GGGGCAAGTGATGTGAATGAGGCTAGGGTCAGGGCCCGAGGGAATGCACAGACTGCTGGGCAAGAACTCTaGAAGCCAACATTCTGTGGC +
Preference number: 4 (lower is better)
Translates to: GASDVNEARVRARGNAQTAGQEL*KPTFCG
Trigger: GCCACAGAATGTTGGCTTGCAGAGTTCTTGCCCAGC...AGTCTGTGCATTCCCTCGGGCCCTGACCCTAGCCTCATTCACATCACTTGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR GCA 90 bp CAGCCTAGGCCTGCCCATCACAGGCTGGACCACCAGGCACTGGACAGGGGCAGAAGCATATGGCTTCTGTaGAAGGTACTTCTGATAAGC +
Preference number: 4 (lower is better)
Translates to: QPRPAHHRLDHQALDRGRSIWLL*KVLLIS
Trigger: GCTTATCAGAAGTACCTTGCACAGAAGCCATATGCT...TCTGCCCCTGTCCAGTGCCTGGTGGTCCAGCCTGTGATGGGCAGGCCTAGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR GCA 90 bp GCAGCCCAGGGCTCTCAGAGTGGCCTTCCAACACTCGGGGCTCAGAAGCTGCTCCTTCATTGGGCTGAGTaGTTACAGATATGTGTGCCT +
Preference number: 4 (lower is better)
Translates to: AAQGSQSGLPTLGAQKLLLHWAE*LQICVP
Trigger: AGGCACACATATCTGTAAGCACTCAGCCCAATGAAG...GAGCAGCTTCTGAGCCCCGAGTGTTGGAAGGCCACTCTGAGAGCCCTGGGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000590884.5
CDS-3UTR GCA 90 bp CAGCCTAGGCCTGCCCATCACAGGCTGGACCACCAGGCACTGGACAGGGGCAGACATCAGCTGAAAAGCTaGTTTACACAAGTGGTCCAT +
Preference number: 4 (lower is better)
Translates to: QPRPAHHRLDHQALDRGRHQLKS*FTQVVH
Trigger: ATGGACCACTTGTGTAAAGCAGCTTTTCAGCTGATG...TCTGCCCCTGTCCAGTGCCTGGTGGTCCAGCCTGTGATGGGCAGGCCTAGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR GCA 90 bp TCCTCGTTCCACTTTGAAGAAGGCCTCCATGAGCATCTGGTCAGGGTGCAGGTCACGGAGGGCCTTGCTTaGAGCATGGTGGAAGTCAGC +
Preference number: 4 (lower is better)
Translates to: SSFHFEEGLHEHLVRVQVTEGLA*SMVEVS
Trigger: GCTGACTTCCACCATGCTGCAAGCAAGGCCCTCCGT...GACCTGCACCCTGACCAGATGCTCATGGAGGCCTTCTTCAAAGTGGAACGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000592272.5
CDS-3UTR GCA 90 bp ACACTCGGGGCTCAGAAGCTGCTCCGCGGAGCTTTGCATAAGCAGCCTGAGAATGCTGCACGGACAAACTaGAGGGTGTGGAATGGGACT +
Preference number: 4 (lower is better)
Translates to: TLGAQKLLRGALHKQPENAARTN*RVWNGT
Trigger: AGTCCCATTCCACACCCTGCAGTTTGTCCGTGCAGC...ATTCTCAGGCTGCTTATGCAAAGCTCCGCGGAGCAGCTTCTGAGCCCCGAGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000590884.5
CDS-3UTR GCA 90 bp TTAGACAAAGGCGACTTCCGGCCAAACCCAATTGCCCCCAGGATCCCAGAGCTGGCTGCGGTTCTGGCCTaGTGTTGCAACAGATTCAGG +
Preference number: 4 (lower is better)
Translates to: LDKGDFRPNPIAPRIPELAAVLA*CCNRFR
Trigger: CCTGAATCTGTTGCAACAGCAGGCCAGAACCGCAGC...CAGCTCTGGGATCCTGGGGGCAATTGGGTTTGGCCGGAAGTCGCCTTTGTCTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR GCA 90 bp GGAGGCAGACAATCATGCTGCGGGTTTCTGGGTGGGGACTGGAATTCCAGGCATAGATTCCCGAAGAGCTaGGGTTCTGGCCTGCTGTTG +
Preference number: 4 (lower is better)
Translates to: GGRQSCCGFLGGDWNSRHRFPKS*GSGLLL
Trigger: CAACAGCAGGCCAGAACCGCAGCTCTTCGGGAATCT...ATGCCTGGAATTCCAGTCCCCACCCAGAAACCCGCAGCATGATTGTCTGCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR GCA 90 bp CATGCTGCGGGTTTCTGGGTGGGGACTGGAATTCCAGGCATCAGAGAGCACACTGCCCCAGGCAGTAAGTaGCAAGTGAATGGACTCCAG +
Preference number: 4 (lower is better)
Translates to: HAAGFWVGTGIPGIREHTAPGSK*QVNGLQ
Trigger: CTGGAGTCCATTCACTTGGCACTTACTGCCTGGGGC...AGTGTGCTCTCTGATGCCTGGAATTCCAGTCCCCACCCAGAAACCCGCAGCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR GCA 90 bp GGAGGCAGACAATCATGCTGCGGGTTTCTGGGTGGGGACTGGAATTCCAGGCATGCCCCAGGCAGTAAGTaGCAAGTGAATGGACTCCAG +
Preference number: 4 (lower is better)
Translates to: GGRQSCCGFLGGDWNSRHAPGSK*QVNGLQ
Trigger: CTGGAGTCCATTCACTTGGCACTTACTGCCTGGGGC...ATGCCTGGAATTCCAGTCCCCACCCAGAAACCCGCAGCATGATTGTCTGCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR GCA 90 bp CAACACTCGGGGCTCAGAAGCTGCTCCGCGGAGCTTTGCATAAGCAGCCTGAGACAACCAAAGGGCTCCTaGATCACCTGGCAACAGCTT +
Preference number: 4 (lower is better)
Translates to: QHSGLRSCSAELCISSLRQPKGS*ITWQQL
Trigger: AAGCTGTTGCCAGGTGATGCAGGAGCCCTTTGGTTG...TCTCAGGCTGCTTATGCAAAGCTCCGCGGAGCAGCTTCTGAGCCCCGAGTGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587884.1
CDS-3UTR GCA 90 bp GCGGGTTTCTGGGTGGGGACTGGAATTCCAGGCATCAGAGAGCACACTAACCCAAGCATCTGGTCAGGGTaGAGGTCCTTCCATGGCAGT +
Preference number: 4 (lower is better)
Translates to: AGFWVGTGIPGIREHTNPSIWSG*RSFHGS
Trigger: ACTGCCATGGAAGGACCTGCACCCTGACCAGATGCT...TGGGTTAGTGTGCTCTCTGATGCCTGGAATTCCAGTCCCCACCCAGAAACCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000592272.5
CDS-3UTR GCA 90 bp GGTCCCGAGTGTGCAGGAAGGAGCTTTGGAAACATGTACAGGTGGGTCCCGAATGGAGGCAGACAATCATaGTGCGGGTTTCTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: GPECAGRSFGNMYRWVPNGGRQS*CGFLGG
Trigger: CCCACCCAGAAACCCGCAGCATGATTGTCTGCCTCC...ATTCGGGACCCACCTGTACATGTTTCCAAAGCTCCTTCCTGCACACTCGGGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR GCA 90 bp GGTCCCGAGTGTGCAGGAAGGAGCTTTGGAAACATGTACAGGTGGGTCCCGAATTCCAGGTCCGGATACTaGCCCGAAGGAACTCTGCTG +
Preference number: 4 (lower is better)
Translates to: GPECAGRSFGNMYRWVPNSRSGY*PEGTLL
Trigger: CAGCAGAGTTCCTTCGGGGCAGTATCCGGACCTGGA...ATTCGGGACCCACCTGTACATGTTTCCAAAGCTCCTTCCTGCACACTCGGGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR GCA 90 bp GGGGCAAGTGATGTGAATGAGGCTAGGGTCAGGGCCCGAGGGAATGCACAGACTCCACGAGGTTCTGCCTaGTCTGAACCAAGAGCAGAA +
Preference number: 4 (lower is better)
Translates to: GASDVNEARVRARGNAQTPRGSA*SEPRAE
Trigger: TTCTGCTCTTGGTTCAGAGCAGGCAGAACCTCGTGG...AGTCTGTGCATTCCCTCGGGCCCTGACCCTAGCCTCATTCACATCACTTGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR GCA 90 bp TCGACAGGGGCAAGTGATGTGAATGAGGCTAGGGTCAGGGCCCGAGGGAATGCACCACGAGGTTCTGCCTaGTCTGAACCAAGAGCAGAA +
Preference number: 4 (lower is better)
Translates to: STGASDVNEARVRARGNAPRGSA*SEPRAE
Trigger: TTCTGCTCTTGGTTCAGAGCAGGCAGAACCTCGTGG...TGCATTCCCTCGGGCCCTGACCCTAGCCTCATTCACATCACTTGCCCCTGTCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR GCA 90 bp GTCCCGAGTGTGCAGGAAGGAGCTTTGGAAACATGTACAGGTGGGTCCCGAATCAGGCAGGAGGATCCCTaGAGAGTGAGAGGGGCACTA +
Preference number: 4 (lower is better)
Translates to: VPSVQEGALETCTGGSRIRQEDP*RVRGAL
Trigger: TAGTGCCCCTCTCACTCTGCAGGGATCCTCCTGCCT...GATTCGGGACCCACCTGTACATGTTTCCAAAGCTCCTTCCTGCACACTCGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CCA 90 bp CAGCCTAGGCCTGCCCATCACAGGCTGGACCACCAGGCACTGGACAGGGGCAGATTCCAACCTGGTCAATaGTCTCTTGAACTCTATCCA +
Preference number: 4 (lower is better)
Translates to: QPRPAHHRLDHQALDRGRFQPGQ*SLELYP
Trigger: TGGATAGAGTTCAAGAGACCATTGACCAGGTTGGAA...TCTGCCCCTGTCCAGTGCCTGGTGGTCCAGCCTGTGATGGGCAGGCCTAGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CCA 90 bp GACTTCCGGCCAAACCCAATTGCCCCCAGGATCCCAGAGCTGAGTCTCTCCTCAATGGGGAGCTTCAGCTaGGTCTGGGCTTTCTTCAGA +
Preference number: 4 (lower is better)
Translates to: DFRPNPIAPRIPELSLSSMGSFS*VWAFFR
Trigger: TCTGAAGAAAGCCCAGACCCAGCTGAAGCTCCCCAT...TGAGGAGAGACTCAGCTCTGGGATCCTGGGGGCAATTGGGTTTGGCCGGAAGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CCA 90 bp GTCCCGAGTGTGCAGGAAGGAGCTTTGGAAACATGTACAGGTGGGTCCCGAATCGCCTTGCTTGCAGCATaGTGGAAGTCAGCCACCTCG +
Preference number: 4 (lower is better)
Translates to: VPSVQEGALETCTGGSRIALLAA*WKSATS
Trigger: CGAGGTGGCTGACTTCCACCATGCTGCAAGCAAGGC...GATTCGGGACCCACCTGTACATGTTTCCAAAGCTCCTTCCTGCACACTCGGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CCA 90 bp GGTCCCGAGTGTGCAGGAAGGAGCTTTGGAAACATGTACAGGTGGGTCCCGAATTTCACTGCCCTCTGCTaGAACACGGAGGGCCTTGCT +
Preference number: 4 (lower is better)
Translates to: GPECAGRSFGNMYRWVPNFTALC*NTEGLA
Trigger: AGCAAGGCCCTCCGTGTTCCAGCAGAGGGCAGTGAA...ATTCGGGACCCACCTGTACATGTTTCCAAAGCTCCTTCCTGCACACTCGGGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CCA 90 bp GGGGCAAGTGATGTGAATGAGGCTAGGGTCAGGGCCCGAGGGAATGCACAGACTACAACTGCGGCTCCTTaGCATTTCTTACCGCTGCTG +
Preference number: 4 (lower is better)
Translates to: GASDVNEARVRARGNAQTTTAAP*HFLPLL
Trigger: CAGCAGCGGTAAGAAATGCCAAGGAGCCGCAGTTGT...AGTCTGTGCATTCCCTCGGGCCCTGACCCTAGCCTCATTCACATCACTTGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CCA 90 bp GGCCTGCTGTTGCAACAGATTCAGGTCTGTGCACACCAGCTGGGTGGCGTCCTTTGGACTCCAGAAGCCTaGTACGATCAGACAGAGGAG +
Preference number: 4 (lower is better)
Translates to: GLLLQQIQVCAHQLGGVLWTPEA*YDQTEE
Trigger: CTCCTCTGTCTGATCGTACCAGGCTTCTGGAGTCCA...AAGGACGCCACCCAGCTGGTGTGCACAGACCTGAATCTGTTGCAACAGCAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587884.1
CDS-3UTR CCA 90 bp AGCAGCCCAGGGCTCTCAGAGTGGCCTTCCAACACTCGGGGCTCAGAAGCTGCTCAAAATATCCTCATCTaGTTCAAGGCCCCAGGCAGT +
Preference number: 4 (lower is better)
Translates to: SSPGLSEWPSNTRGSEAAQNILI*FKAPGS
Trigger: ACTGCCTGGGGCCTTGAACCAGATGAGGATATTTTG...AGCAGCTTCTGAGCCCCGAGTGTTGGAAGGCCACTCTGAGAGCCCTGGGCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000590884.5
CDS-3UTR CCA 90 bp ACAGATCCCTCTGAGACGGACATTTTGTGGCCTGTAAAACTCAAGAGACTAAACGACGCTGCCCCCTGCTaGCAGCTGGGGGCGCAGCAG +
Preference number: 4 (lower is better)
Translates to: TDPSETDILWPVKLKRLNDAAPC*QLGAQQ
Trigger: CTGCTGCGCCCCCAGCTGCCAGCAGGGGGCAGCGTC...GTTTAGTCTCTTGAGTTTTACAGGCCACAAAATGTCCGTCTCAGAGGGATCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CCA 90 bp TCGACAGGGGCAAGTGATGTGAATGAGGCTAGGGTCAGGGCCCGAGGGAATGCATTTCCTGCTGGCAGTTaGGTCTTGGGCCAAACAGGT +
Preference number: 4 (lower is better)
Translates to: STGASDVNEARVRARGNAFPAGS*VLGQTG
Trigger: ACCTGTTTGGCCCAAGACCCAACTGCCAGCAGGAAA...TGCATTCCCTCGGGCCCTGACCCTAGCCTCATTCACATCACTTGCCCCTGTCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CCA 90 bp CTCCATGAGCATCTGGTCAGGGTGCAGGTCCTTCCATGGCAGTTTCCGGTACGTGTGCAGGTCCTTCCATaGCAGTTTCCGGTACGTGCT +
Preference number: 4 (lower is better)
Translates to: LHEHLVRVQVLPWQFPVRVQVLP*QFPVRA
Trigger: AGCACGTACCGGAAACTGCCATGGAAGGACCTGCAC...ACGTACCGGAAACTGCCATGGAAGGACCTGCACCCTGACCAGATGCTCATGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000592272.5
CDS-3UTR CCA 90 bp ACACTCGGGGCTCAGAAGCTGCTCCGCGGAGCTTTGCATAAGCAGCCTGAGAATTTCCTCCACGGAGCTTaGGTACACCTGTTCCAGCCA +
Preference number: 4 (lower is better)
Translates to: TLGAQKLLRGALHKQPENFLHGA*VHLFQP
Trigger: TGGCTGGAACAGGTGTACCCAAGCTCCGTGGAGGAA...ATTCTCAGGCTGCTTATGCAAAGCTCCGCGGAGCAGCTTCTGAGCCCCGAGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000590884.5
CDS-3UTR CCA 90 bp CAGCCTAGGCCTGCCCATCACAGGCTGGACCACCAGGCACTGGACAGGGGCAGATTAGACATCTTTATTTaGTCCCGATGCCACTGTTGG +
Preference number: 4 (lower is better)
Translates to: QPRPAHHRLDHQALDRGRLDIFI*SRCHCW
Trigger: CCAACAGTGGCATCGGGACCAAATAAAGATGTCTAA...TCTGCCCCTGTCCAGTGCCTGGTGGTCCAGCCTGTGATGGGCAGGCCTAGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CCA 90 bp GGTCCCGAGTGTGCAGGAAGGAGCTTTGGAAACATGTACAGGTGGGTCCCGAATCTGTGCACTGCAGCATaGGGAGTGATGGAGAGGGAG +
Preference number: 4 (lower is better)
Translates to: GPECAGRSFGNMYRWVPNLCTAA*GVMERE
Trigger: CTCCCTCTCCATCACTCCCCATGCTGCAGTGCACAG...ATTCGGGACCCACCTGTACATGTTTCCAAAGCTCCTTCCTGCACACTCGGGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR TCA 90 bp GTCCCGAGTGTGCAGGAAGGAGCTTTGGAAACATGTACAGGTGGGTCCCGAATCTGGGTGGCGTCCTTCTaGCTCAATAGCACAGCAGAG +
Preference number: 4 (lower is better)
Translates to: VPSVQEGALETCTGGSRIWVASF*LNSTAE
Trigger: CTCTGCTGTGCTATTGAGTCAGAAGGACGCCACCCA...GATTCGGGACCCACCTGTACATGTTTCCAAAGCTCCTTCCTGCACACTCGGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR TCA 90 bp TTAGACAAAGGCGACTTCCGGCCAAACCCAATTGCCCCCAGGATCCCAGAGCTGGCAGTAAGTGCCAAGTaGATGGACTCCAGAAGCCTG +
Preference number: 4 (lower is better)
Translates to: LDKGDFRPNPIAPRIPELAVSAK*MDSRSL
Trigger: CAGGCTTCTGGAGTCCATTCACTTGGCACTTACTGC...CAGCTCTGGGATCCTGGGGGCAATTGGGTTTGGCCGGAAGTCGCCTTTGTCTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000592272.5
CDS-3UTR TCA 90 bp GCGGGTTTCTGGGTGGGGACTGGAATTCCAGGCATCAGAGAGCACACTAACCCACAGCTGCACAATGCTTaGGGCCACCACAGTATCACT +
Preference number: 4 (lower is better)
Translates to: AGFWVGTGIPGIREHTNPQLHNA*GHHSIT
Trigger: AGTGATACTGTGGTGGCCTCAAGCATTGTGCAGCTG...TGGGTTAGTGTGCTCTCTGATGCCTGGAATTCCAGTCCCCACCCAGAAACCCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587884.1
CDS-3UTR TCA 90 bp AGCAGCCCAGGGCTCTCAGAGTGGCCTTCCAACACTCGGGGCTCAGAAGCTGCTTTTGTTCCAGGGTGCTaGGGAATTGAACCATCTGAT +
Preference number: 4 (lower is better)
Translates to: SSPGLSEWPSNTRGSEAAFVPGC*GIEPSD
Trigger: ATCAGATGGTTCAATTCCTCAGCACCCTGGAACAAA...AGCAGCTTCTGAGCCCCGAGTGTTGGAAGGCCACTCTGAGAGCCCTGGGCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000590884.5
CDS-3UTR TCA 90 bp GGGGCAAGTGATGTGAATGAGGCTAGGGTCAGGGCCCGAGGGAATGCACAGACTAATGGGTCCCCATCCTaGATTCTGATTGAGAGGGCT +
Preference number: 4 (lower is better)
Translates to: GASDVNEARVRARGNAQTNGSPS*ILIERA
Trigger: AGCCCTCTCAATCAGAATTCAGGATGGGGACCCATT...AGTCTGTGCATTCCCTCGGGCCCTGACCCTAGCCTCATTCACATCACTTGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR TCA 90 bp AGACAATCATGCTGCGGGTTTCTGGGTGGGGACTGGAATTCCAGGCATCAGAGAGGAACTCTTCCATGGTaGGCTCGGGAACCTGAAGGG +
Preference number: 4 (lower is better)
Translates to: RQSCCGFLGGDWNSRHQRGTLPW*AREPEG
Trigger: CCCTTCAGGTTCCCGAGCTCACCATGGAAGAGTTCC...TCTCTGATGCCTGGAATTCCAGTCCCCACCCAGAAACCCGCAGCATGATTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR TCA 90 bp GGTCCGGATACTGCCCCGAAGGAACTCTGCTGTTGGAATAGTCGCGTTGTTCATGGAACTCTTCCATGGTaGGCTCGGGAACCTGAAGGG +
Preference number: 4 (lower is better)
Translates to: GPDTAPKELCCWNSRVVHGTLPW*AREPEG
Trigger: CCCTTCAGGTTCCCGAGCTCACCATGGAAGAGTTCC...ATGAACAACGCGACTATTCCAACAGCAGAGTTCCTTCGGGGCAGTATCCGGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR TCA 90 bp GTCCCGAGTGTGCAGGAAGGAGCTTTGGAAACATGTACAGGTGGGTCCCGAATCAGTAACTGCCCAAGGTaGGGCACTCCTGCAGGAACT +
Preference number: 4 (lower is better)
Translates to: VPSVQEGALETCTGGSRISNCPR*GTPAGT
Trigger: AGTTCCTGCAGGAGTGCCTCACCTTGGGCAGTTACT...GATTCGGGACCCACCTGTACATGTTTCCAAAGCTCCTTCCTGCACACTCGGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR TCA 90 bp CGGTTCTGGCCTGCTGTTGCAACAGATTCAGGTCTGTGCACACCAGCTGGGTGGAGGTTCTGCCTGCTCTaGACCAAGAGCAGAATTCGA +
Preference number: 4 (lower is better)
Translates to: RFWPAVATDSGLCTPAGWRFCLL*TKSRIR
Trigger: TCGAATTCTGCTCTTGGTTCAGAGCAGGCAGAACCT...CCACCCAGCTGGTGTGCACAGACCTGAATCTGTTGCAACAGCAGGCCAGAACCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587884.1
CDS-3UTR TCA 90 bp GGTCCCGAGTGTGCAGGAAGGAGCTTTGGAAACATGTACAGGTGGGTCCCGAATGCCAGCTTGCCATCCTaGTTCAGACAGGCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: GPECAGRSFGNMYRWVPNASLPS*FRQAAS
Trigger: AGAAGCTGCCTGTCTGAATCAGGATGGCAAGCTGGC...ATTCGGGACCCACCTGTACATGTTTCCAAAGCTCCTTCCTGCACACTCGGGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR TCA 90 bp CAGCCTAGGCCTGCCCATCACAGGCTGGACCACCAGGCACTGGACAGGGGCAGAAGGAAGCGCTTTCACTaGCCATCTCTGATTATTAAT +
Preference number: 4 (lower is better)
Translates to: QPRPAHHRLDHQALDRGRRKRFH*PSLIIN
Trigger: ATTAATAATCAGAGATGGTCAGTGAAAGCGCTTCCT...TCTGCCCCTGTCCAGTGCCTGGTGGTCCAGCCTGTGATGGGCAGGCCTAGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR GCA 90 bp GGGGCAAGTGATGTGAATGAGGCTAGGGTCAGGGCCCGAGGGAATGCACAGACTTTTTTGTCAAACCCCTaGGCTTCAAGCAACCTGCCC +
Preference number: 4 (lower is better)
Translates to: GASDVNEARVRARGNAQTFLSNP*ASSNLP
Trigger: GGGCAGGTTGCTTGAAGCGCAGGGGTTTGACAAAAA...AGTCTGTGCATTCCCTCGGGCCCTGACCCTAGCCTCATTCACATCACTTGCCCC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR GCA 90 bp GGGGCAAGTGATGTGAATGAGGCTAGGGTCAGGGCCCGAGGGAATGCACAGACTAGGGTCTGGTGGAGGTaGTCAGATTTGGCATCGAAT +
Preference number: 4 (lower is better)
Translates to: GASDVNEARVRARGNAQTRVWWR*SDLASN
Trigger: ATTCGATGCCAAATCTGAGCACCTCCACCAGACCCT...AGTCTGTGCATTCCCTCGGGCCCTGACCCTAGCCTCATTCACATCACTTGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR GCA 90 bp AGGCAGACAATCATGCTGCGGGTTTCTGGGTGGGGACTGGAATTCCAGGCATCAGAACACGGAGGGCCTTaGTTGCAGCATGGTGGAAGT +
Preference number: 4 (lower is better)
Translates to: RQTIMLRVSGWGLEFQASEHGGP*LQHGGS
Trigger: ACTTCCACCATGCTGCAAGCAAGGCCCTCCGTGTTC...TGATGCCTGGAATTCCAGTCCCCACCCAGAAACCCGCAGCATGATTGTCTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR GCA 90 bp CTCCGCGGAGCTTTGCATAAGCAGCCTGAGAATGTCACTGTACTGGTCAGGAAACCCTTCACTGCCCTCTaGTGGAACACGGAGGGCCTT +
Preference number: 4 (lower is better)
Translates to: LRGALHKQPENVTVLVRKPFTAL*WNTEGL
Trigger: AAGGCCCTCCGTGTTCCAGCAGAGGGCAGTGAAGGG...TTTCCTGACCAGTACAGTGACATTCTCAGGCTGCTTATGCAAAGCTCCGCGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000590884.5
CDS-3UTR GCA 90 bp TCTTCCTCCACGGAGCTTGGGTACACCTGTTCCAGCCACTTGCTTAAGATGAGCTCAGGTAACCAGGGGTaGCAGAGTGGCTCTCTGGCA +
Preference number: 4 (lower is better)
Translates to: SSSTELGYTCSSHLLKMSSGNQG*QSGSLA
Trigger: TGCCAGAGAGCCACTCTGGCACCCCTGGTTACCTGA...GCTCATCTTAAGCAAGTGGCTGGAACAGGTGTACCCAAGCTCCGTGGAGGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR GCA 90 bp TCCTCGTTCCACTTTGAAGAAGGCCTCCATGAGCATCTGGTCAGGGTGCAGGTCGCTGCACGGACAAACTaGAGGGTGTGGAATGGGACT +
Preference number: 4 (lower is better)
Translates to: SSFHFEEGLHEHLVRVQVAARTN*RVWNGT
Trigger: AGTCCCATTCCACACCCTGCAGTTTGTCCGTGCAGC...GACCTGCACCCTGACCAGATGCTCATGGAGGCCTTCTTCAAAGTGGAACGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000592272.5
CDS-3UTR GCA 90 bp GGGTGCAGGTCCTTCCATGGCAGTTTCCGGTACGTGCTATGGAAAGCGTACAGAACAGATTCAGGTCTGTaGACACCAGCTGGGTGGCGT +
Preference number: 4 (lower is better)
Translates to: GCRSFHGSFRYVLWKAYRTDSGL*TPAGWR
Trigger: ACGCCACCCAGCTGGTGTGCACAGACCTGAATCTGT...TCTGTACGCTTTCCATAGCACGTACCGGAAACTGCCATGGAAGGACCTGCACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000592272.5
CDS-3UTR GCA 90 bp ACACTCGGGGCTCAGAAGCTGCTCCGCGGAGCTTTGCATAAGCAGCCTGAGAATTACCGCTGCTGCCTCTaGACTCCAAATGTAGTGTGG +
Preference number: 4 (lower is better)
Translates to: TLGAQKLLRGALHKQPENYRCCL*TPNVVW
Trigger: CCACACTACATTTGGAGTGCAGAGGCAGCAGCGGTA...ATTCTCAGGCTGCTTATGCAAAGCTCCGCGGAGCAGCTTCTGAGCCCCGAGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000590884.5
CDS-3UTR GCA 90 bp GGAGGCAGACAATCATGCTGCGGGTTTCTGGGTGGGGACTGGAATTCCAGGCATTACCGCTGCTGCCTCTaGACTCCAAATGTAGTGTGG +
Preference number: 4 (lower is better)
Translates to: GGRQSCCGFLGGDWNSRHYRCCL*TPNVVW
Trigger: CCACACTACATTTGGAGTGCAGAGGCAGCAGCGGTA...ATGCCTGGAATTCCAGTCCCCACCCAGAAACCCGCAGCATGATTGTCTGCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR GCA 90 bp TCTGTAGTCTCAGCCATGTGGCGGACGGACGCCAGGCTCTGGCAGGCTGCTGTTTTAGCAGCTTCTGCTTaGAACTGCTTCACTTCCTTC +
Preference number: 4 (lower is better)
Translates to: SVVSAMWRTDARLWQAAVLAASA*NCFTSF
Trigger: GAAGGAAGTGAAGCAGTTGCAAGCAGAAGCTGCTAA...AACAGCAGCCTGCCAGAGCCTGGCGTCCGTCCGCCACATGGCTGAGACTACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR GCA 90 bp TCTGTAGTCTCAGCCATGTGGCGGACGGACGCCAGGCTCTGGCAGGCTGCTGTTCGTGATCAAGTTTTCTaGATGTACAGCAGCTTCCAC +
Preference number: 4 (lower is better)
Translates to: SVVSAMWRTDARLWQAAVRDQVF*MYSSFH
Trigger: GTGGAAGCTGCTGTACATGCAGAAAACTTGATCACG...AACAGCAGCCTGCCAGAGCCTGGCGTCCGTCCGCCACATGGCTGAGACTACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR GCA 90 bp AGACAATCATGCTGCGGGTTTCTGGGTGGGGACTGGAATTCCAGGCATCAGAGATCGGGGCTCAGAAGCTaGTCCGCGGAGCTTTGCATA +
Preference number: 4 (lower is better)
Translates to: RQSCCGFLGGDWNSRHQRSGLRS*SAELCI
Trigger: TATGCAAAGCTCCGCGGAGCAGCTTCTGAGCCCCGA...TCTCTGATGCCTGGAATTCCAGTCCCCACCCAGAAACCCGCAGCATGATTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR GCA 90 bp TTAGACAAAGGCGACTTCCGGCCAAACCCAATTGCCCCCAGGATCCCAGAGCTGTCAGCACTGTTTTCCTaGTGGCAGTTGGGTCTTGGG +
Preference number: 4 (lower is better)
Translates to: LDKGDFRPNPIAPRIPELSALFS*WQLGLG
Trigger: CCCAAGACCCAACTGCCAGCAGGAAAACAGTGCTGA...CAGCTCTGGGATCCTGGGGGCAATTGGGTTTGGCCGGAAGTCGCCTTTGTCTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR GCA 90 bp ATTAATAGGCAGTGGGACAACATGATTCCGGGATGCAGCCTGCCTCTGCAACCCGGCAGACAATCATGCTaGGGGTTTCTGGGTGGGGAC +
Preference number: 4 (lower is better)
Translates to: INRQWDNMIPGCSLPLQPGRQSC*GFLGGD
Trigger: GTCCCCACCCAGAAACCCGCAGCATGATTGTCTGCC...GGGTTGCAGAGGCAGGCTGCATCCCGGAATCATGTTGTCCCACTGCCTATTAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR GCA 90 bp ATTAATAGGCAGTGGGACAACATGATTCCGGGATGCAGCCTGCCTCTGCAACCCGGAGGCAGACAATCATaGTGCGGGTTTCTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: INRQWDNMIPGCSLPLQPGGRQS*CGFLGG
Trigger: CCCACCCAGAAACCCGCAGCATGATTGTCTGCCTCC...GGGTTGCAGAGGCAGGCTGCATCCCGGAATCATGTTGTCCCACTGCCTATTAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR GCA 90 bp ACCACAAAAACAGCTTTGCCTCTTCCTCCACGGAGCTTGGGTACACCTGTTCCACCGGCCAAACCCAATTaGCCCCAGGATCCCAGAGCT +
Preference number: 4 (lower is better)
Translates to: TTKTALPLPPRSLGTPVPPAKPN*PQDPRA
Trigger: AGCTCTGGGATCCTGGGGGCAATTGGGTTTGGCCGG...TGGAACAGGTGTACCCAAGCTCCGTGGAGGAAGAGGCAAAGCTGTTTTTGTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR GCA 90 bp ATTAATAGGCAGTGGGACAACATGATTCCGGGATGCAGCCTGCCTCTGCAACCCAAGGCTCATTACCCCTaGAAGCCAACAGGCGGGCTG +
Preference number: 4 (lower is better)
Translates to: INRQWDNMIPGCSLPLQPKAHYP*KPTGGL
Trigger: CAGCCCGCCTGTTGGCTTGCAGGGGTAATGAGCCTT...GGGTTGCAGAGGCAGGCTGCATCCCGGAATCATGTTGTCCCACTGCCTATTAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR GCA 90 bp CACCTGCAAGCAAGCACCAACTTAAATGTATGCCCCAGGTGCCTCATTTGTCTCGTGAAGTCTGGAGCCTaGAGCCGTTCGCCCTCCACG +
Preference number: 4 (lower is better)
Translates to: HLQASTNLNVCPRCLICLVKSGA*SRSPST
Trigger: CGTGGAGGGCGAACGGCTGCAGGCTCCAGACTTCAC...GAGACAAATGAGGCACCTGGGGCATACATTTAAGTTGGTGCTTGCTTGCAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR GCA 90 bp GTCCCGAGTGTGCAGGAAGGAGCTTTGGAAACATGTACAGGTGGGTCCCGAATCAACCCACCTGTGCACTaGAGCATGGGGAGTGATGGA +
Preference number: 4 (lower is better)
Translates to: VPSVQEGALETCTGGSRINPPVH*SMGSDG
Trigger: TCCATCACTCCCCATGCTGCAGTGCACAGGTGGGTT...GATTCGGGACCCACCTGTACATGTTTCCAAAGCTCCTTCCTGCACACTCGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR GCA 90 bp ATTAATAGGCAGTGGGACAACATGATTCCGGGATGCAGCCTGCCTCTGCAACCCAGGCAGGAGGATCCCTaGAGAGTGAGAGGGGCACTA +
Preference number: 4 (lower is better)
Translates to: INRQWDNMIPGCSLPLQPRQEDP*RVRGAL
Trigger: TAGTGCCCCTCTCACTCTGCAGGGATCCTCCTGCCT...GGGTTGCAGAGGCAGGCTGCATCCCGGAATCATGTTGTCCCACTGCCTATTAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR GCA 90 bp ATTAATAGGCAGTGGGACAACATGATTCCGGGATGCAGCCTGCCTCTGCAACCCCAGAACTACAGAGCCTaGGGATGGCAGCCTAGGCCT +
Preference number: 4 (lower is better)
Translates to: INRQWDNMIPGCSLPLQPQNYRA*GWQPRP
Trigger: AGGCCTAGGCTGCCATCCGCAGGCTCTGTAGTTCTG...GGGTTGCAGAGGCAGGCTGCATCCCGGAATCATGTTGTCCCACTGCCTATTAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR GCA 90 bp ATTAATAGGCAGTGGGACAACATGATTCCGGGATGCAGCCTGCCTCTGCAACCCAGCCCCAGCCTGAACTaGTCTGGACAGAACCACGAC +
Preference number: 4 (lower is better)
Translates to: INRQWDNMIPGCSLPLQPSPSLN*SGQNHD
Trigger: GTCGTGGTTCTGTCCAGAGCAGTTCAGGCTGGGGCT...GGGTTGCAGAGGCAGGCTGCATCCCGGAATCATGTTGTCCCACTGCCTATTAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CCA 90 bp GTCCCGAGTGTGCAGGAAGGAGCTTTGGAAACATGTACAGGTGGGTCCCGAATCTTGAGACGGGAGTTCTaGGTAGAGTCGCTCACTGCG +
Preference number: 4 (lower is better)
Translates to: VPSVQEGALETCTGGSRILRREF*VESLTA
Trigger: CGCAGTGAGCGACTCTACCCAGAACTCCCGTCTCAA...GATTCGGGACCCACCTGTACATGTTTCCAAAGCTCCTTCCTGCACACTCGGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CCA 90 bp TCGACAGGGGCAAGTGATGTGAATGAGGCTAGGGTCAGGGCCCGAGGGAATGCAGGAGAAGGGAACAGCTaGACAATTCGGCTGTATTCC +
Preference number: 4 (lower is better)
Translates to: STGASDVNEARVRARGNAGEGNS*TIRLYS
Trigger: GGAATACAGCCGAATTGTCCAGCTGTTCCCTTCTCC...TGCATTCCCTCGGGCCCTGACCCTAGCCTCATTCACATCACTTGCCCCTGTCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CCA 90 bp AGGCAGACAATCATGCTGCGGGTTTCTGGGTGGGGACTGGAATTCCAGGCATCATTGCTTGCAGCATGGTaGAAGTCAGCCACCTCGGTC +
Preference number: 4 (lower is better)
Translates to: RQTIMLRVSGWGLEFQASLLAAW*KSATSV
Trigger: GACCGAGGTGGCTGACTTCCACCATGCTGCAAGCAA...TGATGCCTGGAATTCCAGTCCCCACCCAGAAACCCGCAGCATGATTGTCTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CCA 90 bp TGCTTCTGGCTGTCAGTAGGAATAGAAAGGCCCGCAGACACTTTTAGGAGCTTCCCAGGGGTGCCAGAGTaGCTCTCTGGCAGCCCTTCA +
Preference number: 4 (lower is better)
Translates to: CFWLSVGIERPADTFRSFPGVPE*LSGSPS
Trigger: TGAAGGGCTGCCAGAGAGCCACTCTGGCACCCCTGG...GAAGCTCCTAAAAGTGTCTGCGGGCCTTTCTATTCCTACTGACAGCCAGAAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CCA 90 bp GTAAAGAGTCAAGTAACTGCCCAAGGTGAGGCACTCCTGCAGGAACTCTTCCATCCAGGGGTGCCAGAGTaGCTCTCTGGCAGCCCTTCA +
Preference number: 4 (lower is better)
Translates to: VKSQVTAQGEALLQELFHPGVPE*LSGSPS
Trigger: TGAAGGGCTGCCAGAGAGCCACTCTGGCACCCCTGG...ATGGAAGAGTTCCTGCAGGAGTGCCTCACCTTGGGCAGTTACTTGACTCTTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CCA 90 bp GGGGCAAGTGATGTGAATGAGGCTAGGGTCAGGGCCCGAGGGAATGCACAGACTAATGGGACTCAAGCTTaGCCTGTGTCCACAGACCAA +
Preference number: 4 (lower is better)
Translates to: GASDVNEARVRARGNAQTNGTQA*PVSTDQ
Trigger: TTGGTCTGTGGACACAGGCCAAGCTTGAGTCCCATT...AGTCTGTGCATTCCCTCGGGCCCTGACCCTAGCCTCATTCACATCACTTGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CCA 90 bp CACCTGCAAGCAAGCACCAACTTAAATGTATGCCCCAGGTGCCTCATTTGTCTCAGAGCAAGGGGAGGCTaGGGAGCCTCATGCTTCCGC +
Preference number: 4 (lower is better)
Translates to: HLQASTNLNVCPRCLICLRARGG*GASCFR
Trigger: GCGGAAGCATGAGGCTCCCCAGCCTCCCCTTGCTCT...GAGACAAATGAGGCACCTGGGGCATACATTTAAGTTGGTGCTTGCTTGCAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CCA 90 bp CTCCATGAGCATCTGGTCAGGGTGCAGGTCCTTCCATGGCAGTTTCCGGTACGTAGCAGAGGAAATAACTaGCACAGGAGGCTTCGTCGG +
Preference number: 4 (lower is better)
Translates to: LHEHLVRVQVLPWQFPVRSRGNN*HRRLRR
Trigger: CCGACGAAGCCTCCTGTGCCAGTTATTTCCTCTGCT...ACGTACCGGAAACTGCCATGGAAGGACCTGCACCCTGACCAGATGCTCATGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000592272.5
CDS-3UTR CCA 90 bp CTCCATGAGCATCTGGTCAGGGTGCAGGTCCTTCCATGGCAGTTTCCGGTACGTACAACTGCGGCTCCTTaGCATTTCTTACCGCTGCTG +
Preference number: 4 (lower is better)
Translates to: LHEHLVRVQVLPWQFPVRTTAAP*HFLPLL
Trigger: CAGCAGCGGTAAGAAATGCCAAGGAGCCGCAGTTGT...ACGTACCGGAAACTGCCATGGAAGGACCTGCACCCTGACCAGATGCTCATGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000592272.5
CDS-3UTR CCA 90 bp CATGCTGCGGGTTTCTGGGTGGGGACTGGAATTCCAGGCATCAGAGAGCACACTAAAGAACTGCCTTGTTaGGGGATGACGCTGCGTCTC +
Preference number: 4 (lower is better)
Translates to: HAAGFWVGTGIPGIREHTKELPC*GMTLRL
Trigger: GAGACGCAGCGTCATCCCCCAACAAGGCAGTTCTTT...AGTGTGCTCTCTGATGCCTGGAATTCCAGTCCCCACCCAGAAACCCGCAGCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CCA 90 bp AGGCAGACAATCATGCTGCGGGTTTCTGGGTGGGGACTGGAATTCCAGGCATCAGCACTGTTTTCCTGCTaGCAGTTGGGTCTTGGGCCA +
Preference number: 4 (lower is better)
Translates to: RQTIMLRVSGWGLEFQASALFSC*QLGLGP
Trigger: TGGCCCAAGACCCAACTGCCAGCAGGAAAACAGTGC...TGATGCCTGGAATTCCAGTCCCCACCCAGAAACCCGCAGCATGATTGTCTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CCA 90 bp GTCAGGGTGCAGGTCCTTCCATGGCAGTTTCCGGTACGTGCTATGGAAAGCGTAGCACTGTTTTCCTGCTaGCAGTTGGGTCTTGGGCCA +
Preference number: 4 (lower is better)
Translates to: VRVQVLPWQFPVRAMESVALFSC*QLGLGP
Trigger: TGGCCCAAGACCCAACTGCCAGCAGGAAAACAGTGC...TACGCTTTCCATAGCACGTACCGGAAACTGCCATGGAAGGACCTGCACCCTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000592272.5
CDS-3UTR CCA 90 bp GGGGCAAGTGATGTGAATGAGGCTAGGGTCAGGGCCCGAGGGAATGCACAGACTTTTCTGGGTGGGGACTaGAATTCCAGGCATCAGAGA +
Preference number: 4 (lower is better)
Translates to: GASDVNEARVRARGNAQTFLGGD*NSRHQR
Trigger: TCTCTGATGCCTGGAATTCCAGTCCCCACCCAGAAA...AGTCTGTGCATTCCCTCGGGCCCTGACCCTAGCCTCATTCACATCACTTGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CCA 90 bp GTCAGGGTGCAGGTCCTTCCATGGCAGTTTCCGGTACGTGCTATGGAAAGCGTACATGCTGCGGGTTTCTaGGTGGGGACTGGAATTCCA +
Preference number: 4 (lower is better)
Translates to: VRVQVLPWQFPVRAMESVHAAGF*VGTGIP
Trigger: TGGAATTCCAGTCCCCACCCAGAAACCCGCAGCATG...TACGCTTTCCATAGCACGTACCGGAAACTGCCATGGAAGGACCTGCACCCTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000592272.5
CDS-3UTR CCA 90 bp CACCTGCAAGCAAGCACCAACTTAAATGTATGCCCCAGGTGCCTCATTTGTCTCGTAGTCTCAGCCATGTaGCGGACGGACGCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: HLQASTNLNVCPRCLICLVVSAM*RTDARL
Trigger: GAGCCTGGCGTCCGTCCGCCACATGGCTGAGACTAC...GAGACAAATGAGGCACCTGGGGCATACATTTAAGTTGGTGCTTGCTTGCAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CCA 90 bp GGGGCAAGTGATGTGAATGAGGCTAGGGTCAGGGCCCGAGGGAATGCACAGACTCAGCCTGAACTGCTCTaGACAGAACCACGACCAATA +
Preference number: 4 (lower is better)
Translates to: GASDVNEARVRARGNAQTQPELL*TEPRPI
Trigger: TATTGGTCGTGGTTCTGTCCAGAGCAGTTCAGGCTG...AGTCTGTGCATTCCCTCGGGCCCTGACCCTAGCCTCATTCACATCACTTGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CCA 90 bp GGGGCAAGTGATGTGAATGAGGCTAGGGTCAGGGCCCGAGGGAATGCACAGACTTTAATGTGCCTCCCATaGGGCACAGCTACTGAAAGC +
Preference number: 4 (lower is better)
Translates to: GASDVNEARVRARGNAQTLMCLP*GTATES
Trigger: GCTTTCAGTAGCTGTGCCCCATGGGAGGCACATTAA...AGTCTGTGCATTCCCTCGGGCCCTGACCCTAGCCTCATTCACATCACTTGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CCA 90 bp TCGACAGGGGCAAGTGATGTGAATGAGGCTAGGGTCAGGGCCCGAGGGAATGCAAAATACAGCTACTCCTaGACACTGATGCCCGAGGCA +
Preference number: 4 (lower is better)
Translates to: STGASDVNEARVRARGNAKYSYS*TLMPEA
Trigger: TGCCTCGGGCATCAGTGTCCAGGAGTAGCTGTATTT...TGCATTCCCTCGGGCCCTGACCCTAGCCTCATTCACATCACTTGCCCCTGTCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR TCA 90 bp ACACTCGGGGCTCAGAAGCTGCTCCGCGGAGCTTTGCATAAGCAGCCTGAGAATAGATGGATTCCATGTTaGGCACTGTCCAGGCAAACC +
Preference number: 4 (lower is better)
Translates to: TLGAQKLLRGALHKQPENRWIPC*ALSRQT
Trigger: GGTTTGCCTGGACAGTGCTCAACATGGAATCCATCT...ATTCTCAGGCTGCTTATGCAAAGCTCCGCGGAGCAGCTTCTGAGCCCCGAGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000590884.5
CDS-3UTR TCA 90 bp TTTTGGCCAATCCAGGTCCGGATACTGCCCCGAAGGAACTCTGCTGTTGGAATAAGTGGCAGGAGGGGGTaGTCAGAAGGTGTGACCAGA +
Preference number: 4 (lower is better)
Translates to: FWPIQVRILPRRNSAVGISGRRG*SEGVTR
Trigger: TCTGGTCACACCTTCTGATCACCCCCTCCTGCCACT...TATTCCAACAGCAGAGTTCCTTCGGGGCAGTATCCGGACCTGGATTGGCCAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR TCA 90 bp GGGTGCAGGTCCTTCCATGGCAGTTTCCGGTACGTGCTATGGAAAGCGTACAGATGTGGTCCCGGACGGTaGAGATACAGAAGGAAGAAC +
Preference number: 4 (lower is better)
Translates to: GCRSFHGSFRYVLWKAYRCGPGR*RYRRKN
Trigger: GTTCTTCCTTCTGTATCTTCACCGTCCGGGACCACA...TCTGTACGCTTTCCATAGCACGTACCGGAAACTGCCATGGAAGGACCTGCACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000592272.5
CDS-3UTR TCA 90 bp GGTCCGGATACTGCCCCGAAGGAACTCTGCTGTTGGAATAGTCGCGTTGTTCATCCAGCAAAGGATCAGTaGAGTCCAGCTGCACGGACA +
Preference number: 4 (lower is better)
Translates to: GPDTAPKELCCWNSRVVHPAKDQ*SPAART
Trigger: TGTCCGTGCAGCTGGACTTCACTGATCCTTTGCTGG...ATGAACAACGCGACTATTCCAACAGCAGAGTTCCTTCGGGGCAGTATCCGGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR TCA 90 bp AGACAATCATGCTGCGGGTTTCTGGGTGGGGACTGGAATTCCAGGCATCAGAGACTTCAAACTGAACCGTaGCAACTGCGGCTCCTTGGC +
Preference number: 4 (lower is better)
Translates to: RQSCCGFLGGDWNSRHQRLQTEP*QLRLLG
Trigger: GCCAAGGAGCCGCAGTTGTCACGGTTCAGTTTGAAG...TCTCTGATGCCTGGAATTCCAGTCCCCACCCAGAAACCCGCAGCATGATTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR TCA 90 bp GTCAGGGTGCAGGTCCTTCCATGGCAGTTTCCGGTACGTGCTATGGAAAGCGTAATTCTTTTGCCAGGATaGTGGACGGCGGGTAATGGC +
Preference number: 4 (lower is better)
Translates to: VRVQVLPWQFPVRAMESVILLPG*WTAGNG
Trigger: GCCATTACCCGCCGTCCATCATCCTGGCAAAAGAAT...TACGCTTTCCATAGCACGTACCGGAAACTGCCATGGAAGGACCTGCACCCTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000592272.5
CDS-3UTR TCA 90 bp ACACTCGGGGCTCAGAAGCTGCTCCGCGGAGCTTTGCATAAGCAGCCTGAGAATAATGGGTCCCCATCCTaGATTCTGATTGAGAGGGCT +
Preference number: 4 (lower is better)
Translates to: TLGAQKLLRGALHKQPENNGSPS*ILIERA
Trigger: AGCCCTCTCAATCAGAATTCAGGATGGGGACCCATT...ATTCTCAGGCTGCTTATGCAAAGCTCCGCGGAGCAGCTTCTGAGCCCCGAGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000590884.5
CDS-3UTR TCA 90 bp GCGGGTTTCTGGGTGGGGACTGGAATTCCAGGCATCAGAGAGCACACTAACCCAAATGGGTCCCCATCCTaGATTCTGATTGAGAGGGCT +
Preference number: 4 (lower is better)
Translates to: AGFWVGTGIPGIREHTNPNGSPS*ILIERA
Trigger: AGCCCTCTCAATCAGAATTCAGGATGGGGACCCATT...TGGGTTAGTGTGCTCTCTGATGCCTGGAATTCCAGTCCCCACCCAGAAACCCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR TCA 90 bp ATTAATAGGCAGTGGGACAACATGATTCCGGGATGCAGCCTGCCTCTGCAACCCGTGAGCTCGGGAACCTaGAGGGATACCAGAATGGGT +
Preference number: 4 (lower is better)
Translates to: INRQWDNMIPGCSLPLQPVSSGT*RDTRMG
Trigger: ACCCATTCTGGTATCCCTTCAGGTTCCCGAGCTCAC...GGGTTGCAGAGGCAGGCTGCATCCCGGAATCATGTTGTCCCACTGCCTATTAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR TCA 90 bp GGGGCAAGTGATGTGAATGAGGCTAGGGTCAGGGCCCGAGGGAATGCACAGACTATTTTGATGATGAACTaGGAGGAACCAGGAGGCCGT +
Preference number: 4 (lower is better)
Translates to: GASDVNEARVRARGNAQTILMMN*EEPGGR
Trigger: ACGGCCTCCTGGTTCCTCTCAGTTCATCATCAAAAT...AGTCTGTGCATTCCCTCGGGCCCTGACCCTAGCCTCATTCACATCACTTGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR GCA 90 bp GGTCCCGAGTGTGCAGGAAGGAGCTTTGGAAACATGTACAGGTGGGTCCCGAATGGTAGAGTCGCTCACTaGGAAGCAAGGGTTTCACTG +
Preference number: 4 (lower is better)
Translates to: GPECAGRSFGNMYRWVPNGRVAH*EARVSL
Trigger: CAGTGAAACCCTTGCTTCGCAGTGAGCGACTCTACC...ATTCGGGACCCACCTGTACATGTTTCCAAAGCTCCTTCCTGCACACTCGGGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR GCA 90 bp GTCCCGAGTGTGCAGGAAGGAGCTTTGGAAACATGTACAGGTGGGTCCCGAATCAACAGCCAATGGGCATaGCCGCTTTCACAGCCTTCA +
Preference number: 4 (lower is better)
Translates to: VPSVQEGALETCTGGSRINSQWA*PLSQPS
Trigger: TGAAGGCTGTGAAAGCGGGCATGCCCATTGGCTGTT...GATTCGGGACCCACCTGTACATGTTTCCAAAGCTCCTTCCTGCACACTCGGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR GCA 90 bp CATGCTGCGGGTTTCTGGGTGGGGACTGGAATTCCAGGCATCAGAGAGCACACTGGCATTTCTTACCGCTaGTGCCTCTGCACTCCAAAT +
Preference number: 4 (lower is better)
Translates to: HAAGFWVGTGIPGIREHTGISYR*CLCTPN
Trigger: ATTTGGAGTGCAGAGGCAGCAGCGGTAAGAAATGCC...AGTGTGCTCTCTGATGCCTGGAATTCCAGTCCCCACCCAGAAACCCGCAGCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR GCA 90 bp ACCACAAAAACAGCTTTGCCTCTTCCTCCACGGAGCTTGGGTACACCTGTTCCATCGGGGCTCAGAAGCTaGTCCGCGGAGCTTTGCATA +
Preference number: 4 (lower is better)
Translates to: TTKTALPLPPRSLGTPVPSGLRS*SAELCI
Trigger: TATGCAAAGCTCCGCGGAGCAGCTTCTGAGCCCCGA...TGGAACAGGTGTACCCAAGCTCCGTGGAGGAAGAGGCAAAGCTGTTTTTGTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR GCA 90 bp GGGTGCAGGTCCTTCCATGGCAGTTTCCGGTACGTGCTATGGAAAGCGTACAGACAACCAAAGGGCTCCTaGATCACCTGGCAACAGCTT +
Preference number: 4 (lower is better)
Translates to: GCRSFHGSFRYVLWKAYRQPKGS*ITWQQL
Trigger: AAGCTGTTGCCAGGTGATGCAGGAGCCCTTTGGTTG...TCTGTACGCTTTCCATAGCACGTACCGGAAACTGCCATGGAAGGACCTGCACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000592272.5
CDS-3UTR GCA 90 bp GACTTCCGGCCAAACCCAATTGCCCCCAGGATCCCAGAGCTGAGTCTCTCCTCAAGCATAAGATTCTTTTaGCAGGATGATGGACGGCGG +
Preference number: 4 (lower is better)
Translates to: DFRPNPIAPRIPELSLSSSIRFF*QDDGRR
Trigger: CCGCCGTCCATCATCCTGGCAAAAGAATCTTATGCT...TGAGGAGAGACTCAGCTCTGGGATCCTGGGGGCAATTGGGTTTGGCCGGAAGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR GCA 90 bp GACTTCCGGCCAAACCCAATTGCCCCCAGGATCCCAGAGCTGAGTCTCTCCTCAGGAACTGCATCAAGATaGTTCTGGCTGTCAGTAGGA +
Preference number: 4 (lower is better)
Translates to: DFRPNPIAPRIPELSLSSGTASR*FWLSVG
Trigger: TCCTACTGACAGCCAGAAGCATCTTGATGCAGTTCC...TGAGGAGAGACTCAGCTCTGGGATCCTGGGGGCAATTGGGTTTGGCCGGAAGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR GCA 90 bp GCCAGCAAAGGATCAGTGAAGTCCAGCTGCACGGACAAACTGCAGGGTGTGGAAAAGGTGAGGCACTCCTaGAGGAACTCTTCCATGGTG +
Preference number: 4 (lower is better)
Translates to: ASKGSVKSSCTDKLQGVEKVRHS*RNSSMV
Trigger: CACCATGGAAGAGTTCCTGCAGGAGTGCCTCACCTT...TTCCACACCCTGCAGTTTGTCCGTGCAGCTGGACTTCACTGATCCTTTGCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587884.1
CDS-3UTR GCA 90 bp TCGACAGGGGCAAGTGATGTGAATGAGGCTAGGGTCAGGGCCCGAGGGAATGCAAGGCAATGGCCAGGATaGCTTATAAATTGGGTGGCT +
Preference number: 4 (lower is better)
Translates to: STGASDVNEARVRARGNARQWPG*LINWVA
Trigger: AGCCACCCAATTTATAAGGCATCCTGGCCATTGCCT...TGCATTCCCTCGGGCCCTGACCCTAGCCTCATTCACATCACTTGCCCCTGTCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR GCA 90 bp TCGACAGGGGCAAGTGATGTGAATGAGGCTAGGGTCAGGGCCCGAGGGAATGCAAACTGTGAGTGGCTCTaGACCCAAGTGGAACTTAGT +
Preference number: 4 (lower is better)
Translates to: STGASDVNEARVRARGNANCEWL*TQVELS
Trigger: ACTAAGTTCCACTTGGGTGCAGAGCCACTCACAGTT...TGCATTCCCTCGGGCCCTGACCCTAGCCTCATTCACATCACTTGCCCCTGTCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR GCA 90 bp ATTAATAGGCAGTGGGACAACATGATTCCGGGATGCAGCCTGCCTCTGCAACCCAACCCACCTGTGCACTaGAGCATGGGGAGTGATGGA +
Preference number: 4 (lower is better)
Translates to: INRQWDNMIPGCSLPLQPNPPVH*SMGSDG
Trigger: TCCATCACTCCCCATGCTGCAGTGCACAGGTGGGTT...GGGTTGCAGAGGCAGGCTGCATCCCGGAATCATGTTGTCCCACTGCCTATTAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR GCA 90 bp CACCTGCAAGCAAGCACCAACTTAAATGTATGCCCCAGGTGCCTCATTTGTCTCGATGCAGCCTGCCTCTaGAACCCACCTGTGCACTGC +
Preference number: 4 (lower is better)
Translates to: HLQASTNLNVCPRCLICLDAACL*NPPVHC
Trigger: GCAGTGCACAGGTGGGTTGCAGAGGCAGGCTGCATC...GAGACAAATGAGGCACCTGGGGCATACATTTAAGTTGGTGCTTGCTTGCAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR GCA 90 bp ATTAATAGGCAGTGGGACAACATGATTCCGGGATGCAGCCTGCCTCTGCAACCCAACATGATTCCGGGATaGAGCCTGCCTCTGCAACCC +
Preference number: 4 (lower is better)
Translates to: INRQWDNMIPGCSLPLQPNMIPG*SLPLQP
Trigger: GGGTTGCAGAGGCAGGCTGCATCCCGGAATCATGTT...GGGTTGCAGAGGCAGGCTGCATCCCGGAATCATGTTGTCCCACTGCCTATTAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR GCA 90 bp GGTCCCGAGTGTGCAGGAAGGAGCTTTGGAAACATGTACAGGTGGGTCCCGAATCTGAGGTCCCGAGTGTaGAGGAAGGAGCTTTGGAAA +
Preference number: 4 (lower is better)
Translates to: GPECAGRSFGNMYRWVPNLRSRV*RKELWK
Trigger: TTTCCAAAGCTCCTTCCTGCACACTCGGGACCTCAG...ATTCGGGACCCACCTGTACATGTTTCCAAAGCTCCTTCCTGCACACTCGGGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CCA 90 bp GTAAAGAGTCAAGTAACTGCCCAAGGTGAGGCACTCCTGCAGGAACTCTTCCATAGACCTGAGTGGGCGTaGCCAAGCCCTCCACAAAGG +
Preference number: 4 (lower is better)
Translates to: VKSQVTAQGEALLQELFHRPEWA*PSPPQR
Trigger: CCTTTGTGGAGGGCTTGGCCACGCCCACTCAGGTCT...ATGGAAGAGTTCCTGCAGGAGTGCCTCACCTTGGGCAGTTACTTGACTCTTTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CCA 90 bp CAACACTCGGGGCTCAGAAGCTGCTCCGCGGAGCTTTGCATAAGCAGCCTGAGAATAACTCTCCGGAGCTaGGAGTCCTCTTCAAAGATG +
Preference number: 4 (lower is better)
Translates to: QHSGLRSCSAELCISSLRITLRS*ESSSKM
Trigger: CATCTTTGAAGAGGACTCCCAGCTCCGGAGAGTTAT...TCTCAGGCTGCTTATGCAAAGCTCCGCGGAGCAGCTTCTGAGCCCCGAGTGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000590884.5
CDS-3UTR CCA 90 bp GGTCCCGAGTGTGCAGGAAGGAGCTTTGGAAACATGTACAGGTGGGTCCCGAATAGCTTCAGCTGGGTCTaGGCTTTCTTCAGAGCTTGG +
Preference number: 4 (lower is better)
Translates to: GPECAGRSFGNMYRWVPNSFSWV*AFFRAW
Trigger: CCAAGCTCTGAAGAAAGCCCAGACCCAGCTGAAGCT...ATTCGGGACCCACCTGTACATGTTTCCAAAGCTCCTTCCTGCACACTCGGGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CCA 90 bp GTAAAGAGTCAAGTAACTGCCCAAGGTGAGGCACTCCTGCAGGAACTCTTCCATCAGCCTCTGGAGGGATaGCACGATGGGGAGCTTCAG +
Preference number: 4 (lower is better)
Translates to: VKSQVTAQGEALLQELFHQPLEG*HDGELQ
Trigger: CTGAAGCTCCCCATCGTGCCATCCCTCCAGAGGCTG...ATGGAAGAGTTCCTGCAGGAGTGCCTCACCTTGGGCAGTTACTTGACTCTTTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CCA 90 bp CTGCCCCGAAGGAACTCTGCTGTTGGAATAGTCGCGTTGTTCATCATCATCAGGGCCTTGCTTGCAGCATaGTGGAAGTCAGCCACCTCG +
Preference number: 4 (lower is better)
Translates to: LPRRNSAVGIVALFIIIRALLAA*WKSATS
Trigger: CGAGGTGGCTGACTTCCACCATGCTGCAAGCAAGGC...CCTGATGATGATGAACAACGCGACTATTCCAACAGCAGAGTTCCTTCGGGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CCA 90 bp TCTTCCTCCACGGAGCTTGGGTACACCTGTTCCAGCCACTTGCTTAAGATGAGCCTGCAGGGTGTGGAATaGGACTCAAGCTTGGCCTGT +
Preference number: 4 (lower is better)
Translates to: SSSTELGYTCSSHLLKMSLQGVE*DSSLAC
Trigger: ACAGGCCAAGCTTGAGTCCCATTCCACACCCTGCAG...GCTCATCTTAAGCAAGTGGCTGGAACAGGTGTACCCAAGCTCCGTGGAGGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CCA 90 bp GATACTGCCCCGAAGGAACTCTGCTGTTGGAATAGTCGCGTTGTTCATCATCATAGAGCAAGGGGAGGCTaGGGAGCCTCATGCTTCCGC +
Preference number: 4 (lower is better)
Translates to: DTAPKELCCWNSRVVHHHRARGG*GASCFR
Trigger: GCGGAAGCATGAGGCTCCCCAGCCTCCCCTTGCTCT...ATGATGATGAACAACGCGACTATTCCAACAGCAGAGTTCCTTCGGGGCAGTATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CCA 90 bp GCCAGCAAAGGATCAGTGAAGTCCAGCTGCACGGACAAACTGCAGGGTGTGGAATGCACACCAGCTGGGTaGCGTCCTTCTGACTCAATA +
Preference number: 4 (lower is better)
Translates to: ASKGSVKSSCTDKLQGVECTPAG*RPSDSI
Trigger: TATTGAGTCAGAAGGACGCCACCCAGCTGGTGTGCA...TTCCACACCCTGCAGTTTGTCCGTGCAGCTGGACTTCACTGATCCTTTGCTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587884.1
CDS-3UTR CCA 90 bp GTCAGGGTGCAGGTCCTTCCATGGCAGTTTCCGGTACGTGCTATGGAAAGCGTATGCACACCAGCTGGGTaGCGTCCTTCTGACTCAATA +
Preference number: 4 (lower is better)
Translates to: VRVQVLPWQFPVRAMESVCTPAG*RPSDSI
Trigger: TATTGAGTCAGAAGGACGCCACCCAGCTGGTGTGCA...TACGCTTTCCATAGCACGTACCGGAAACTGCCATGGAAGGACCTGCACCCTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000592272.5
CDS-3UTR CCA 90 bp GGTCCCGAGTGTGCAGGAAGGAGCTTTGGAAACATGTACAGGTGGGTCCCGAATTGGACTCCAGAAGCCTaGTACGATCAGACAGAGGAG +
Preference number: 4 (lower is better)
Translates to: GPECAGRSFGNMYRWVPNWTPEA*YDQTEE
Trigger: CTCCTCTGTCTGATCGTACCAGGCTTCTGGAGTCCA...ATTCGGGACCCACCTGTACATGTTTCCAAAGCTCCTTCCTGCACACTCGGGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CCA 90 bp GGGTGCAGGTCCTTCCATGGCAGTTTCCGGTACGTGCTATGGAAAGCGTACAGATGGACTCCAGAAGCCTaGTACGATCAGACAGAGGAG +
Preference number: 4 (lower is better)
Translates to: GCRSFHGSFRYVLWKAYRWTPEA*YDQTEE
Trigger: CTCCTCTGTCTGATCGTACCAGGCTTCTGGAGTCCA...TCTGTACGCTTTCCATAGCACGTACCGGAAACTGCCATGGAAGGACCTGCACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000592272.5
CDS-3UTR CCA 90 bp TCGACAGGGGCAAGTGATGTGAATGAGGCTAGGGTCAGGGCCCGAGGGAATGCACAAAATATCCTCATCTaGTTCAAGGCCCCAGGCAGT +
Preference number: 4 (lower is better)
Translates to: STGASDVNEARVRARGNAQNILI*FKAPGS
Trigger: ACTGCCTGGGGCCTTGAACCAGATGAGGATATTTTG...TGCATTCCCTCGGGCCCTGACCCTAGCCTCATTCACATCACTTGCCCCTGTCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CCA 90 bp GCTTCACTTCCTTCCGTAAAACATGAAGCTGTTGGCTTATGGCTTCATTCTTATGACGCTGCCCCCTGCTaGCAGCTGGGGGCGCAGCAG +
Preference number: 4 (lower is better)
Translates to: ASLPSVKHEAVGLWLHSYDAAPC*QLGAQQ
Trigger: CTGCTGCGCCCCCAGCTGCCAGCAGGGGGCAGCGTC...ATAAGAATGAAGCCATAAGCCAACAGCTTCATGTTTTACGGAAGGAAGTGAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000587884.1
CDS-3UTR CCA 90 bp TCCTCGTTCCACTTTGAAGAAGGCCTCCATGAGCATCTGGTCAGGGTGCAGGTCTTTCCTGCTGGCAGTTaGGTCTTGGGCCAAACAGGT +
Preference number: 4 (lower is better)
Translates to: SSFHFEEGLHEHLVRVQVFPAGS*VLGQTG
Trigger: ACCTGTTTGGCCCAAGACCCAACTGCCAGCAGGAAA...GACCTGCACCCTGACCAGATGCTCATGGAGGCCTTCTTCAAAGTGGAACGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000592272.5
CDS-3UTR CCA 90 bp TCTGTAGTCTCAGCCATGTGGCGGACGGACGCCAGGCTCTGGCAGGCTGCTGTTGTACAGAATGAACTCTaGCATTTTGGGTGCTGTACA +
Preference number: 4 (lower is better)
Translates to: SVVSAMWRTDARLWQAAVVQNEL*HFGCCT
Trigger: TGTACAGCACCCAAAATGCCAGAGTTCATTCTGTAC...AACAGCAGCCTGCCAGAGCCTGGCGTCCGTCCGCCACATGGCTGAGACTACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000592272.5
CDS-3UTR CCA 90 bp GCCCCGAAGGAACTCTGCTGTTGGAATAGTCGCGTTGTTCATCATCATCAGGACGCCTCCATGAGCATCTaGTCAGGGTGCAGGTCCTTC +
Preference number: 4 (lower is better)
Translates to: APKELCCWNSRVVHHHQDASMSI*SGCRSF
Trigger: GAAGGACCTGCACCCTGACCAGATGCTCATGGAGGC...GTCCTGATGATGATGAACAACGCGACTATTCCAACAGCAGAGTTCCTTCGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000592272.5
CDS-3UTR CCA 90 bp CTCCGCGGAGCTTTGCATAAGCAGCCTGAGAATGTCACTGTACTGGTCAGGAAAACGGACGCCAGGCTCTaGCAGGCTGCTGTTAAAAGG +
Preference number: 4 (lower is better)
Translates to: LRGALHKQPENVTVLVRKTDARL*QAAVKR
Trigger: CCTTTTAACAGCAGCCTGCCAGAGCCTGGCGTCCGT...TTTCCTGACCAGTACAGTGACATTCTCAGGCTGCTTATGCAAAGCTCCGCGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000590884.5
CDS-3UTR CCA 90 bp TTTTGGCCAATCCAGGTCCGGATACTGCCCCGAAGGAACTCTGCTGTTGGAATAACGGACGCCAGGCTCTaGCAGGCTGCTGTTAAAAGG +
Preference number: 4 (lower is better)
Translates to: FWPIQVRILPRRNSAVGITDARL*QAAVKR
Trigger: CCTTTTAACAGCAGCCTGCCAGAGCCTGGCGTCCGT...TATTCCAACAGCAGAGTTCCTTCGGGGCAGTATCCGGACCTGGATTGGCCAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CCA 90 bp TCTTCCTCCACGGAGCTTGGGTACACCTGTTCCAGCCACTTGCTTAAGATGAGCTTCCTCCACGGAGCTTaGGTACACCTGTTCCAGCCA +
Preference number: 4 (lower is better)
Translates to: SSSTELGYTCSSHLLKMSFLHGA*VHLFQP
Trigger: TGGCTGGAACAGGTGTACCCAAGCTCCGTGGAGGAA...GCTCATCTTAAGCAAGTGGCTGGAACAGGTGTACCCAAGCTCCGTGGAGGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CCA 90 bp GTCCCGAGTGTGCAGGAAGGAGCTTTGGAAACATGTACAGGTGGGTCCCGAATCCCCTCCCTCTATGTCTaGTGTGTTCCAGCATTCTGC +
Preference number: 4 (lower is better)
Translates to: VPSVQEGALETCTGGSRIPSLYV*CVPAFC
Trigger: GCAGAATGCTGGAACACACCAGACATAGAGGGAGGG...GATTCGGGACCCACCTGTACATGTTTCCAAAGCTCCTTCCTGCACACTCGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CCA 90 bp TCGACAGGGGCAAGTGATGTGAATGAGGCTAGGGTCAGGGCCCGAGGGAATGCATGCAGGAAGGAGCTTTaGAAACATGTACAGGTGGGT +
Preference number: 4 (lower is better)
Translates to: STGASDVNEARVRARGNACRKEL*KHVQVG
Trigger: ACCCACCTGTACATGTTTCCAAAGCTCCTTCCTGCA...TGCATTCCCTCGGGCCCTGACCCTAGCCTCATTCACATCACTTGCCCCTGTCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CCA 90 bp GGTCCCGAGTGTGCAGGAAGGAGCTTTGGAAACATGTACAGGTGGGTCCCGAATGCCCGAGGCATGCTGTaGAAACCGGACCAAAATGAA +
Preference number: 4 (lower is better)
Translates to: GPECAGRSFGNMYRWVPNARGML*KPDQNE
Trigger: TTCATTTTGGTCCGGTTTCCACAGCATGCCTCGGGC...ATTCGGGACCCACCTGTACATGTTTCCAAAGCTCCTTCCTGCACACTCGGGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR CAA 72 bp GCGGGCGGACCACAAGGTCAGGAGTTTGAAACCAGCTaGTCTCAATGGCTGGGTGAAACCCTGTCTCTACTA +
Preference number: 4 (lower is better)
Translates to: AGGPQGQEFETS*SQWLGETLSLL
Trigger: TAGTAGAGACAGGGTTTCACCCAGCCATTGAGACAAGCTGGTTTCAAACTCCTGACCTTGTGGTCCGCCCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR CAA 72 bp CATGCCTTCAAACTGAACCGTGACAACTGCGGCTCCTaGGCATTTCTTACCGCTGCTGCCTCTGCACTCCAA +
Preference number: 4 (lower is better)
Translates to: HAFKLNRDNCGS*AFLTAAASALQ
Trigger: TTGGAGTGCAGAGGCAGCAGCGGTAAGAAATGCCAAGGAGCCGCAGTTGTCACGGTTCAGTTTGAAGGCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587884.1
CDS-3UTR TCA 90 bp GGTCCCGAGTGTGCAGGAAGGAGCTTTGGAAACATGTACAGGTGGGTCCCGAATACTCAGCTCGATTTTTaGCAGGAGACATCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: GPECAGRSFGNMYRWVPNTQLDF*QETSAG
Trigger: CCCTGCTGATGTCTCCTGTCAAAAATCGAGCTGAGT...ATTCGGGACCCACCTGTACATGTTTCCAAAGCTCCTTCCTGCACACTCGGGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR TCA 90 bp CACCTGCAAGCAAGCACCAACTTAAATGTATGCCCCAGGTGCCTCATTTGTCTCTGTTGTGTGACACCCTaGGGGACACCGCTGTCCAAG +
Preference number: 4 (lower is better)
Translates to: HLQASTNLNVCPRCLICLCCVTP*GTPLSK
Trigger: CTTGGACAGCGGTGTCCCTCAGGGTGTCACACAACA...GAGACAAATGAGGCACCTGGGGCATACATTTAAGTTGGTGCTTGCTTGCAGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR TCA 90 bp TTAGACAAAGGCGACTTCCGGCCAAACCCAATTGCCCCCAGGATCCCAGAGCTGCCCACTTCATTGGGCTaGGTGCTTACAGATATGTGT +
Preference number: 4 (lower is better)
Translates to: LDKGDFRPNPIAPRIPELPTSLG*VLTDMC
Trigger: ACACATATCTGTAAGCACTCAGCCCAATGAAGTGGG...CAGCTCTGGGATCCTGGGGGCAATTGGGTTTGGCCGGAAGTCGCCTTTGTCTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR TCA 90 bp AGACAATCATGCTGCGGGTTTCTGGGTGGGGACTGGAATTCCAGGCATCAGAGACCACAAAGGAAGGAGTaGTGTTGCCTGCCACAATCC +
Preference number: 4 (lower is better)
Translates to: RQSCCGFLGGDWNSRHQRPQRKE*CCLPQS
Trigger: GGATTGTGGCAGGCAACATCACTCCTTCCTTTGTGG...TCTCTGATGCCTGGAATTCCAGTCCCCACCCAGAAACCCGCAGCATGATTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR TCA 90 bp TCTTCCTCCACGGAGCTTGGGTACACCTGTTCCAGCCACTTGCTTAAGATGAGCCCACAAAGGAAGGAGTaGTGTTGCCTGCCACAATCC +
Preference number: 4 (lower is better)
Translates to: SSSTELGYTCSSHLLKMSPQRKE*CCLPQS
Trigger: GGATTGTGGCAGGCAACATCACTCCTTCCTTTGTGG...GCTCATCTTAAGCAAGTGGCTGGAACAGGTGTACCCAAGCTCCGTGGAGGAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR TCA 90 bp TCCTCGTTCCACTTTGAAGAAGGCCTCCATGAGCATCTGGTCAGGGTGCAGGTCAGATGGATTCCATGTTaGGCACTGTCCAGGCAAACC +
Preference number: 4 (lower is better)
Translates to: SSFHFEEGLHEHLVRVQVRWIPC*ALSRQT
Trigger: GGTTTGCCTGGACAGTGCTCAACATGGAATCCATCT...GACCTGCACCCTGACCAGATGCTCATGGAGGCCTTCTTCAAAGTGGAACGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000592272.5
CDS-3UTR TCA 90 bp GGTCCGGATACTGCCCCGAAGGAACTCTGCTGTTGGAATAGTCGCGTTGTTCATAGAACTTCTGCCAAATaGGTGGCAGGAGGGGGTGAT +
Preference number: 4 (lower is better)
Translates to: GPDTAPKELCCWNSRVVHRTSAK*VAGGGD
Trigger: ATCACCCCCTCCTGCCACTCATTTGGCAGAAGTTCT...ATGAACAACGCGACTATTCCAACAGCAGAGTTCCTTCGGGGCAGTATCCGGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR TCA 90 bp GACTTCCGGCCAAACCCAATTGCCCCCAGGATCCCAGAGCTGAGTCTCTCCTCAATCCACAGATCCTGCTaGTTCTGCATCACTTTTGCT +
Preference number: 4 (lower is better)
Translates to: DFRPNPIAPRIPELSLSSIHRSC*FCITFA
Trigger: AGCAAAAGTGATGCAGAATCAGCAGGATCTGTGGAT...TGAGGAGAGACTCAGCTCTGGGATCCTGGGGGCAATTGGGTTTGGCCGGAAGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000590884.5
ENST00000592272.5
CDS-3UTR TCA 90 bp GCCCCGAAGGAACTCTGCTGTTGGAATAGTCGCGTTGTTCATCATCATCAGGACTGGGTGGCGTCCTTCTaGCTCAATAGCACAGCAGAG +
Preference number: 4 (lower is better)
Translates to: APKELCCWNSRVVHHHQDWVASF*LNSTAE
Trigger: CTCTGCTGTGCTATTGAGTCAGAAGGACGCCACCCA...GTCCTGATGATGATGAACAACGCGACTATTCCAACAGCAGAGTTCCTTCGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR TCA 90 bp TCTGTAGTCTCAGCCATGTGGCGGACGGACGCCAGGCTCTGGCAGGCTGCTGTTGTTTGGTCTACCAGTTaGACTTCCTTTGCCAATAAA +
Preference number: 4 (lower is better)
Translates to: SVVSAMWRTDARLWQAAVVWSTS*TSFANK
Trigger: TTTATTGGCAAAGGAAGTTCAACTGGTAGACCAAAC...AACAGCAGCCTGCCAGAGCCTGGCGTCCGTCCGCCACATGGCTGAGACTACAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR TCA 90 bp CTCCATGAGCATCTGGTCAGGGTGCAGGTCCTTCCATGGCAGTTTCCGGTACGTGCGGGTAATGGCTGCTaGAATAACTTAGCACACTCT +
Preference number: 4 (lower is better)
Translates to: LHEHLVRVQVLPWQFPVRAGNGC*NNLAHS
Trigger: AGAGTGTGCTAAGTTATTTCAGCAGCCATTACCCGC...ACGTACCGGAAACTGCCATGGAAGGACCTGCACCCTGACCAGATGCTCATGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000592272.5
CDS-3UTR TCA 90 bp AGTGTTAGAAAGGCGCTTCCTTACCTGTTAGACAAAGGCGACTTCCGGCCAAACGGAACTCTTCCATGGTaGGCTCGGGAACCTGAAGGG +
Preference number: 4 (lower is better)
Translates to: SVRKALPYLLDKGDFRPNGTLPW*AREPEG
Trigger: CCCTTCAGGTTCCCGAGCTCACCATGGAAGAGTTCC...GTTTGGCCGGAAGTCGCCTTTGTCTAACAGGTAAGGAAGCGCCTTTCTAACACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR TCA 90 bp ATTAATAGGCAGTGGGACAACATGATTCCGGGATGCAGCCTGCCTCTGCAACCCCATCTGGAGGTCTTGTaGGATGACTGGGACATTCGG +
Preference number: 4 (lower is better)
Translates to: INRQWDNMIPGCSLPLQPHLEVL*DDWDIR
Trigger: CCGAATGTCCCAGTCATCTCACAAGACCTCCAGATG...GGGTTGCAGAGGCAGGCTGCATCCCGGAATCATGTTGTCCCACTGCCTATTAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR TCA 90 bp GGGGCAAGTGATGTGAATGAGGCTAGGGTCAGGGCCCGAGGGAATGCACAGACTAGTAAGGGTACTGAGTaGCTTCCAAGGTTGTCAGAT +
Preference number: 4 (lower is better)
Translates to: GASDVNEARVRARGNAQTSKGTE*LPRLSD
Trigger: ATCTGACAACCTTGGAAGTCACTCAGTACCCTTACT...AGTCTGTGCATTCCCTCGGGCCCTGACCCTAGCCTCATTCACATCACTTGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR TCA 90 bp ATGTCTGAACTAGCTCAGTGTCTTTATAGCACGTTCCTAGCCCAGAGTTTCCCAGGGCTGGGGCCAGAATaGGGTAAAGGAGGCACCACG +
Preference number: 4 (lower is better)
Translates to: MSELAQCLYSTFLAQSFPGLGPE*GKGGTT
Trigger: CGTGGTGCCTCCTTTACCTCATTCTGGCCCCAGCCC...TGGGAAACTCTGGGCTAGGAACGTGCTATAAAGACACTGAGCTAGTTCAGACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR GCA 90 bp GATACTGCCCCGAAGGAACTCTGCTGTTGGAATAGTCGCGTTGTTCATCATCATCTGGCAGCCCTTCACTaGCCTCTGCTGGAACACGGA +
Preference number: 4 (lower is better)
Translates to: DTAPKELCCWNSRVVHHHLAALH*PLLEHG
Trigger: TCCGTGTTCCAGCAGAGGGCAGTGAAGGGCTGCCAG...ATGATGATGAACAACGCGACTATTCCAACAGCAGAGTTCCTTCGGGGCAGTATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR GCA 90 bp AGACAATCATGCTGCGGGTTTCTGGGTGGGGACTGGAATTCCAGGCATCAGAGACTCACCAGCTCCTTGTaGAGTTCTGGTGAAGTCAGG +
Preference number: 4 (lower is better)
Translates to: RQSCCGFLGGDWNSRHQRLTSSL*SSGEVR
Trigger: CCTGACTTCACCAGAACTGCACAAGGAGCTGGTGAG...TCTCTGATGCCTGGAATTCCAGTCCCCACCCAGAAACCCGCAGCATGATTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR GCA 90 bp CTCCGCGGAGCTTTGCATAAGCAGCCTGAGAATGTCACTGTACTGGTCAGGAAAACAGATTCAGGTCTGTaGACACCAGCTGGGTGGCGT +
Preference number: 4 (lower is better)
Translates to: LRGALHKQPENVTVLVRKTDSGL*TPAGWR
Trigger: ACGCCACCCAGCTGGTGTGCACAGACCTGAATCTGT...TTTCCTGACCAGTACAGTGACATTCTCAGGCTGCTTATGCAAAGCTCCGCGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000590884.5
CDS-3UTR GCA 90 bp ACCACAAAAACAGCTTTGCCTCTTCCTCCACGGAGCTTGGGTACACCTGTTCCAGCTGCGGTTCTGGCCTaGTGTTGCAACAGATTCAGG +
Preference number: 4 (lower is better)
Translates to: TTKTALPLPPRSLGTPVPAAVLA*CCNRFR
Trigger: CCTGAATCTGTTGCAACAGCAGGCCAGAACCGCAGC...TGGAACAGGTGTACCCAAGCTCCGTGGAGGAAGAGGCAAAGCTGTTTTTGTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR GCA 90 bp GACTTCCGGCCAAACCCAATTGCCCCCAGGATCCCAGAGCTGAGTCTCTCCTCAGCTTCTGCTTGCAACTaGTTCACTTCCTTCCGTAAA +
Preference number: 4 (lower is better)
Translates to: DFRPNPIAPRIPELSLSSASACN*FTSFRK
Trigger: TTTACGGAAGGAAGTGAAGCAGTTGCAAGCAGAAGC...TGAGGAGAGACTCAGCTCTGGGATCCTGGGGGCAATTGGGTTTGGCCGGAAGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR GCA 90 bp CAACACTCGGGGCTCAGAAGCTGCTCCGCGGAGCTTTGCATAAGCAGCCTGAGATTAGCAGCTTCTGCTTaGAACTGCTTCACTTCCTTC +
Preference number: 4 (lower is better)
Translates to: QHSGLRSCSAELCISSLRLAASA*NCFTSF
Trigger: GAAGGAAGTGAAGCAGTTGCAAGCAGAAGCTGCTAA...TCTCAGGCTGCTTATGCAAAGCTCCGCGGAGCAGCTTCTGAGCCCCGAGTGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000590884.5
CDS-3UTR GCA 90 bp GACTTCCGGCCAAACCCAATTGCCCCCAGGATCCCAGAGCTGAGTCTCTCCTCATGGTTTAGCAGCTTCTaGTTGCAACTGCTTCACTTC +
Preference number: 4 (lower is better)
Translates to: DFRPNPIAPRIPELSLSSWFSSF*LQLLHF
Trigger: GAAGTGAAGCAGTTGCAAGCAGAAGCTGCTAAACCA...TGAGGAGAGACTCAGCTCTGGGATCCTGGGGGCAATTGGGTTTGGCCGGAAGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR GCA 90 bp ACCACAAAAACAGCTTTGCCTCTTCCTCCACGGAGCTTGGGTACACCTGTTCCAAGCATCTGGTCAGGGTaGAGGTCCTTCCATGGCAGT +
Preference number: 4 (lower is better)
Translates to: TTKTALPLPPRSLGTPVPSIWSG*RSFHGS
Trigger: ACTGCCATGGAAGGACCTGCACCCTGACCAGATGCT...TGGAACAGGTGTACCCAAGCTCCGTGGAGGAAGAGGCAAAGCTGTTTTTGTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000592272.5
CDS-3UTR GCA 90 bp GTAAAGAGTCAAGTAACTGCCCAAGGTGAGGCACTCCTGCAGGAACTCTTCCATTCCAGGTCCGGATACTaGCCCGAAGGAACTCTGCTG +
Preference number: 4 (lower is better)
Translates to: VKSQVTAQGEALLQELFHSRSGY*PEGTLL
Trigger: CAGCAGAGTTCCTTCGGGGCAGTATCCGGACCTGGA...ATGGAAGAGTTCCTGCAGGAGTGCCTCACCTTGGGCAGTTACTTGACTCTTTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR GCA 90 bp TGCTTCTGGCTGTCAGTAGGAATAGAAAGGCCCGCAGACACTTTTAGGAGCTTCTCCAGGTCCGGATACTaGCCCGAAGGAACTCTGCTG +
Preference number: 4 (lower is better)
Translates to: CFWLSVGIERPADTFRSFSRSGY*PEGTLL
Trigger: CAGCAGAGTTCCTTCGGGGCAGTATCCGGACCTGGA...GAAGCTCCTAAAAGTGTCTGCGGGCCTTTCTATTCCTACTGACAGCCAGAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR GCA 90 bp TCTTCCTCCACGGAGCTTGGGTACACCTGTTCCAGCCACTTGCTTAAGATGAGCAAGGTGAGGCACTCCTaGAGGAACTCTTCCATGGTG +
Preference number: 4 (lower is better)
Translates to: SSSTELGYTCSSHLLKMSKVRHS*RNSSMV
Trigger: CACCATGGAAGAGTTCCTGCAGGAGTGCCTCACCTT...GCTCATCTTAAGCAAGTGGCTGGAACAGGTGTACCCAAGCTCCGTGGAGGAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR GCA 90 bp GTCCCGAGTGTGCAGGAAGGAGCTTTGGAAACATGTACAGGTGGGTCCCGAATCCCACAAAAACAGCTTTaGCTCTTCCTCCACGGAGCT +
Preference number: 4 (lower is better)
Translates to: VPSVQEGALETCTGGSRIPQKQL*LFLHGA
Trigger: AGCTCCGTGGAGGAAGAGGCAAAGCTGTTTTTGTGG...GATTCGGGACCCACCTGTACATGTTTCCAAAGCTCCTTCCTGCACACTCGGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR GCA 90 bp CATTCGGCAACTGTGAGTGGCTCTGCACCCAAGTGGAACTTAGTAAGTTTCTCTCCGGCCAAACCCAATTaGCCCCAGGATCCCAGAGCT +
Preference number: 4 (lower is better)
Translates to: HSATVSGSAPKWNLVSFSPAKPN*PQDPRA
Trigger: AGCTCTGGGATCCTGGGGGCAATTGGGTTTGGCCGG...AGAGAAACTTACTAAGTTCCACTTGGGTGCAGAGCCACTCACAGTTGCCGAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR GCA 90 bp CACCTGCAAGCAAGCACCAACTTAAATGTATGCCCCAGGTGCCTCATTTGTCTCAGAGGCAGCCCTGTCTaGACTCCTCACCAAGTGGAC +
Preference number: 4 (lower is better)
Translates to: HLQASTNLNVCPRCLICLRGSPV*TPHQVD
Trigger: GTCCACTTGGTGAGGAGTGCAGACAGGGCTGCCTCT...GAGACAAATGAGGCACCTGGGGCATACATTTAAGTTGGTGCTTGCTTGCAGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR GCA 90 bp GGGGCAAGTGATGTGAATGAGGCTAGGGTCAGGGCCCGAGGGAATGCACAGACTGTGTCTATCAAAGGGTaGAAACTTAGGTGTCGACAG +
Preference number: 4 (lower is better)
Translates to: GASDVNEARVRARGNAQTVSIKG*KLRCRQ
Trigger: CTGTCGACACCTAAGTTTGCACCCTTTGATAGACAC...AGTCTGTGCATTCCCTCGGGCCCTGACCCTAGCCTCATTCACATCACTTGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR GCA 90 bp CACCTGCAAGCAAGCACCAACTTAAATGTATGCCCCAGGTGCCTCATTTGTCTCAAGGCTCATTACCCCTaGAAGCCAACAGGCGGGCTG +
Preference number: 4 (lower is better)
Translates to: HLQASTNLNVCPRCLICLKAHYP*KPTGGL
Trigger: CAGCCCGCCTGTTGGCTTGCAGGGGTAATGAGCCTT...GAGACAAATGAGGCACCTGGGGCATACATTTAAGTTGGTGCTTGCTTGCAGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR GCA 90 bp ATGTCTGAACTAGCTCAGTGTCTTTATAGCACGTTCCTAGCCCAGAGTTTCCCAGTTCGCCCTCCACGCTaGTCAGTCCACAGGGCCTTG +
Preference number: 4 (lower is better)
Translates to: MSELAQCLYSTFLAQSFPVRPPR*SVHRAL
Trigger: CAAGGCCCTGTGGACTGAGCAGCGTGGAGGGCGAAC...TGGGAAACTCTGGGCTAGGAACGTGCTATAAAGACACTGAGCTAGTTCAGACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR GCA 90 bp CATTCGGCAACTGTGAGTGGCTCTGCACCCAAGTGGAACTTAGTAAGTTTCTCTTTCCGGGATGCAGCCTaGCTCTGCAACCCACCTGTG +
Preference number: 4 (lower is better)
Translates to: HSATVSGSAPKWNLVSFSFRDAA*LCNPPV
Trigger: CACAGGTGGGTTGCAGAGGCAGGCTGCATCCCGGAA...AGAGAAACTTACTAAGTTCCACTTGGGTGCAGAGCCACTCACAGTTGCCGAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR GCA 90 bp GGGGCAAGTGATGTGAATGAGGCTAGGGTCAGGGCCCGAGGGAATGCACAGACTAAATATCTAAAGGTCTaGCTCAAGGAGGGGCAAGTG +
Preference number: 4 (lower is better)
Translates to: GASDVNEARVRARGNAQTKYLKV*LKEGQV
Trigger: CACTTGCCCCTCCTTGAGGCAGACCTTTAGATATTT...AGTCTGTGCATTCCCTCGGGCCCTGACCCTAGCCTCATTCACATCACTTGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CCA 90 bp GTCCCGAGTGTGCAGGAAGGAGCTTTGGAAACATGTACAGGTGGGTCCCGAATCCCACATTGGTTCTTCTaGCCTGAGCCATCTGAGCAA +
Preference number: 4 (lower is better)
Translates to: VPSVQEGALETCTGGSRIPHWFF*PEPSEQ
Trigger: TTGCTCAGATGGCTCAGGCCAGAAGAACCAATGTGG...GATTCGGGACCCACCTGTACATGTTTCCAAAGCTCCTTCCTGCACACTCGGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CCA 90 bp TCGACAGGGGCAAGTGATGTGAATGAGGCTAGGGTCAGGGCCCGAGGGAATGCAACAGATATGTGTGCCTaGATCATGCTGTTGAGAAGC +
Preference number: 4 (lower is better)
Translates to: STGASDVNEARVRARGNATDMCA*IMLLRS
Trigger: GCTTCTCAACAGCATGATCCAGGCACACATATCTGT...TGCATTCCCTCGGGCCCTGACCCTAGCCTCATTCACATCACTTGCCCCTGTCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CCA 90 bp CATTCGGCAACTGTGAGTGGCTCTGCACCCAAGTGGAACTTAGTAAGTTTCTCTAGACCTGAGTGGGCGTaGCCAAGCCCTCCACAAAGG +
Preference number: 4 (lower is better)
Translates to: HSATVSGSAPKWNLVSFSRPEWA*PSPPQR
Trigger: CCTTTGTGGAGGGCTTGGCCACGCCCACTCAGGTCT...AGAGAAACTTACTAAGTTCCACTTGGGTGCAGAGCCACTCACAGTTGCCGAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CCA 90 bp TTTCCGGTACGTGCTATGGAAAGCGTACAGAATGAACTCTGGCATTTTGGGTGCAGACCTGAGTGGGCGTaGCCAAGCCCTCCACAAAGG +
Preference number: 4 (lower is better)
Translates to: FPVRAMESVQNELWHFGCRPEWA*PSPPQR
Trigger: CCTTTGTGGAGGGCTTGGCCACGCCCACTCAGGTCT...GCACCCAAAATGCCAGAGTTCATTCTGTACGCTTTCCATAGCACGTACCGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000592272.5
CDS-3UTR CCA 90 bp CATTCGGCAACTGTGAGTGGCTCTGCACCCAAGTGGAACTTAGTAAGTTTCTCTCAAACCAGACCTGAGTaGGCGTGGCCAAGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: HSATVSGSAPKWNLVSFSQTRPE*AWPSPP
Trigger: TGGAGGGCTTGGCCACGCCCACTCAGGTCTGGTTTG...AGAGAAACTTACTAAGTTCCACTTGGGTGCAGAGCCACTCACAGTTGCCGAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CCA 90 bp AATAGTCGCGTTGTTCATCATCATCAGGACTTCCATAAAGAGGCTGCTGAGGGCCAAACCAGACCTGAGTaGGCGTGGCCAAGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: NSRVVHHHQDFHKEAAEGQTRPE*AWPSPP
Trigger: TGGAGGGCTTGGCCACGCCCACTCAGGTCTGGTTTG...GCCCTCAGCAGCCTCTTTATGGAAGTCCTGATGATGATGAACAACGCGACTATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CCA 90 bp GTGCTGTACATGCTTCACAATAATGCATCAGGTGCAACCAAAGGGCTCCTGCATCAAACCAGACCTGAGTaGGCGTGGCCAAGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: VLYMLHNNASGATKGLLHQTRPE*AWPSPP
Trigger: TGGAGGGCTTGGCCACGCCCACTCAGGTCTGGTTTG...ATGCAGGAGCCCTTTGGTTGCACCTGATGCATTATTGTGAAGCATGTACAGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000592272.5
CDS-3UTR CCA 90 bp CACTTTGAAGAAGGCCTCCATGAGCATCTGGTCAGGGTGCAGGTCCTTCCATGGGCTTTCTTCAGAGCTTaGTCAGGGGTGAAAGCAGAG +
Preference number: 4 (lower is better)
Translates to: HFEEGLHEHLVRVQVLPWAFFRA*SGVKAE
Trigger: CTCTGCTTTCACCCCTGACCAAGCTCTGAAGAAAGC...CCATGGAAGGACCTGCACCCTGACCAGATGCTCATGGAGGCCTTCTTCAAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000592272.5
CDS-3UTR CCA 90 bp ATTAATAGGCAGTGGGACAACATGATTCCGGGATGCAGCCTGCCTCTGCAACCCATGGGGAGCTTCAGCTaGGTCTGGGCTTTCTTCAGA +
Preference number: 4 (lower is better)
Translates to: INRQWDNMIPGCSLPLQPMGSFS*VWAFFR
Trigger: TCTGAAGAAAGCCCAGACCCAGCTGAAGCTCCCCAT...GGGTTGCAGAGGCAGGCTGCATCCCGGAATCATGTTGTCCCACTGCCTATTAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CCA 90 bp TGCTGTACATGCTTCACAATAATGCATCAGGTGCAACCAAAGGGCTCCTGCATCCAGCCTCTGGAGGGATaGCACGATGGGGAGCTTCAG +
Preference number: 4 (lower is better)
Translates to: CCTCFTIMHQVQPKGSCIQPLEG*HDGELQ
Trigger: CTGAAGCTCCCCATCGTGCCATCCCTCCAGAGGCTG...GATGCAGGAGCCCTTTGGTTGCACCTGATGCATTATTGTGAAGCATGTACAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000592272.5
CDS-3UTR CCA 90 bp GTCAGGGTGCAGGTCCTTCCATGGCAGTTTCCGGTACGTGCTATGGAAAGCGTAAATGGGACTCAAGCTTaGCCTGTGTCCACAGACCAA +
Preference number: 4 (lower is better)
Translates to: VRVQVLPWQFPVRAMESVNGTQA*PVSTDQ
Trigger: TTGGTCTGTGGACACAGGCCAAGCTTGAGTCCCATT...TACGCTTTCCATAGCACGTACCGGAAACTGCCATGGAAGGACCTGCACCCTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000592272.5
CDS-3UTR CCA 90 bp TTTTGGCCAATCCAGGTCCGGATACTGCCCCGAAGGAACTCTGCTGTTGGAATACTGCAGGGTGTGGAATaGGACTCAAGCTTGGCCTGT +
Preference number: 4 (lower is better)
Translates to: FWPIQVRILPRRNSAVGILQGVE*DSSLAC
Trigger: ACAGGCCAAGCTTGAGTCCCATTCCACACCCTGCAG...TATTCCAACAGCAGAGTTCCTTCGGGGCAGTATCCGGACCTGGATTGGCCAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CCA 90 bp AGGCAGACAATCATGCTGCGGGTTTCTGGGTGGGGACTGGAATTCCAGGCATCAACAAACTGCAGGGTGTaGAATGGGACTCAAGCTTGG +
Preference number: 4 (lower is better)
Translates to: RQTIMLRVSGWGLEFQASTNCRV*NGTQAW
Trigger: CCAAGCTTGAGTCCCATTCCACACCCTGCAGTTTGT...TGATGCCTGGAATTCCAGTCCCCACCCAGAAACCCGCAGCATGATTGTCTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CCA 90 bp GGTCCGGATACTGCCCCGAAGGAACTCTGCTGTTGGAATAGTCGCGTTGTTCATGAAGAGCTGCGGTTCTaGCCTGCTGTTGCAACAGAT +
Preference number: 4 (lower is better)
Translates to: GPDTAPKELCCWNSRVVHEELRF*PAVATD
Trigger: ATCTGTTGCAACAGCAGGCCAGAACCGCAGCTCTTC...ATGAACAACGCGACTATTCCAACAGCAGAGTTCCTTCGGGGCAGTATCCGGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CCA 90 bp ACCACAAAAACAGCTTTGCCTCTTCCTCCACGGAGCTTGGGTACACCTGTTCCAGCACTGTTTTCCTGCTaGCAGTTGGGTCTTGGGCCA +
Preference number: 4 (lower is better)
Translates to: TTKTALPLPPRSLGTPVPALFSC*QLGLGP
Trigger: TGGCCCAAGACCCAACTGCCAGCAGGAAAACAGTGC...TGGAACAGGTGTACCCAAGCTCCGTGGAGGAAGAGGCAAAGCTGTTTTTGTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CCA 90 bp GTCAGGGTGCAGGTCCTTCCATGGCAGTTTCCGGTACGTGCTATGGAAAGCGTATTTCTGGGTGGGGACTaGAATTCCAGGCATCAGAGA +
Preference number: 4 (lower is better)
Translates to: VRVQVLPWQFPVRAMESVFLGGD*NSRHQR
Trigger: TCTCTGATGCCTGGAATTCCAGTCCCCACCCAGAAA...TACGCTTTCCATAGCACGTACCGGAAACTGCCATGGAAGGACCTGCACCCTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000592272.5
CDS-3UTR CCA 90 bp CACCTGCAAGCAAGCACCAACTTAAATGTATGCCCCAGGTGCCTCATTTGTCTCCTGCGGGTTTCTGGGTaGGGACTGGAATTCCAGGCA +
Preference number: 4 (lower is better)
Translates to: HLQASTNLNVCPRCLICLLRVSG*GLEFQA
Trigger: TGCCTGGAATTCCAGTCCCCACCCAGAAACCCGCAG...GAGACAAATGAGGCACCTGGGGCATACATTTAAGTTGGTGCTTGCTTGCAGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CCA 90 bp ATGACGCTGCGTCTCATCGCTGACGTAATCCACAATAGTAAAGAAAAGGCTAATGCCATGTGGCGGGTCTaGCTGTCCATGTCGGGCGGG +
Preference number: 4 (lower is better)
Translates to: MTLRLIADVIHNSKEKANAMWRV*LSMSGG
Trigger: CCCGCCCGACATGGACAGCCAGACCCGCCACATGGC...ATTAGCCTTTTCTTTACTATTGTGGATTACGTCAGCGATGAGACGCAGCGTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587884.1
CDS-3UTR CCA 90 bp CTAACCCAGTTGACTTCACAGAGTACAGACCCCAAAAATAAGAAACAGCTCTTGGCCATGTGGCGGGTCTaGCTGTCCATGTCGGGCGGG +
Preference number: 4 (lower is better)
Translates to: LTQLTSQSTDPKNKKQLLAMWRV*LSMSGG
Trigger: CCCGCCCGACATGGACAGCCAGACCCGCCACATGGC...CAAGAGCTGTTTCTTATTTTTGGGGTCTGTACTCTGTGAAGTCAACTGGGTTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CCA 90 bp CGGACAAACTGCAGGGTGTGGAATGGGACTCAAGCTTGGCCTGTGTCCACAGACGAAGGGATACCAGAATaGGTCCCCATCCTGAATTCT +
Preference number: 4 (lower is better)
Translates to: RTNCRVWNGTQAWPVSTDEGIPE*VPILNS
Trigger: AGAATTCAGGATGGGGACCCATTCTGGTATCCCTTC...GTCTGTGGACACAGGCCAAGCTTGAGTCCCATTCCACACCCTGCAGTTTGTCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587884.1
CDS-3UTR CCA 90 bp CACCTGCAAGCAAGCACCAACTTAAATGTATGCCCCAGGTGCCTCATTTGTCTCTCCCGATGCCACTGTTaGCCACCCTGTGGTGAAGTC +
Preference number: 4 (lower is better)
Translates to: HLQASTNLNVCPRCLICLSRCHC*PPCGEV
Trigger: GACTTCACCACAGGGTGGCCAACAGTGGCATCGGGA...GAGACAAATGAGGCACCTGGGGCATACATTTAAGTTGGTGCTTGCTTGCAGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CCA 90 bp ATGTCTGAACTAGCTCAGTGTCTTTATAGCACGTTCCTAGCCCAGAGTTTCCCAACATTGCAGGGGAGATaGGCGCGGTGGCTCACGCCT +
Preference number: 4 (lower is better)
Translates to: MSELAQCLYSTFLAQSFPTLQGR*ARWLTP
Trigger: AGGCGTGAGCCACCGCGCCCATCTCCCCTGCAATGT...TGGGAAACTCTGGGCTAGGAACGTGCTATAAAGACACTGAGCTAGTTCAGACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CCA 90 bp GTCCCGAGTGTGCAGGAAGGAGCTTTGGAAACATGTACAGGTGGGTCCCGAATCTTAATGTGCCTCCCATaGGGCACAGCTACTGAAAGC +
Preference number: 4 (lower is better)
Translates to: VPSVQEGALETCTGGSRILMCLP*GTATES
Trigger: GCTTTCAGTAGCTGTGCCCCATGGGAGGCACATTAA...GATTCGGGACCCACCTGTACATGTTTCCAAAGCTCCTTCCTGCACACTCGGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR CAA 72 bp CCCGAATCCACTGCTACTGTCATGCTATGTAGACAGTaGTGTAGACACATCTGGCAGGACCTCCCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: PESTATVMLCRQ*CRHIWQDLPPS
Trigger: AGAGGGAGGGAGGTCCTGCCAGATGTGTCTACACAACTGTCTACATAGCATGACAGTAGCAGTGGATTCGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR CAA 72 bp AGAGCTGAAGGACTTGGTGCCACCACAAAAACAGCTTaGCCTCTTCCTCCACGGAGCTTGGGTACACCTGTT +
Preference number: 4 (lower is better)
Translates to: RAEGLGATTKTA*PLPPRSLGTPV
Trigger: AACAGGTGTACCCAAGCTCCGTGGAGGAAGAGGCAAAGCTGTTTTTGTGGTGGCACCAAGTCCTTCAGCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR TCA 90 bp GGAGGCAGACAATCATGCTGCGGGTTTCTGGGTGGGGACTGGAATTCCAGGCATTCTTCCTGCATCAGCTaGAAAGCTGCTTTACACAAG +
Preference number: 4 (lower is better)
Translates to: GGRQSCCGFLGGDWNSRHSSCIS*KAALHK
Trigger: CTTGTGTAAAGCAGCTTTTCAGCTGATGCAGGAAGA...ATGCCTGGAATTCCAGTCCCCACCCAGAAACCCGCAGCATGATTGTCTGCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR TCA 90 bp GTAAAGAGTCAAGTAACTGCCCAAGGTGAGGCACTCCTGCAGGAACTCTTCCATTGGGTGGCGTCCTTCTaGCTCAATAGCACAGCAGAG +
Preference number: 4 (lower is better)
Translates to: VKSQVTAQGEALLQELFHWVASF*LNSTAE
Trigger: CTCTGCTGTGCTATTGAGTCAGAAGGACGCCACCCA...ATGGAAGAGTTCCTGCAGGAGTGCCTCACCTTGGGCAGTTACTTGACTCTTTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR TCA 90 bp TGCTGTACATGCTTCACAATAATGCATCAGGTGCAACCAAAGGGCTCCTGCATCTCCAGAGCAACCTGCTaGGATTCCCGAAGAGCTGCG +
Preference number: 4 (lower is better)
Translates to: CCTCFTIMHQVQPKGSCISRATC*DSRRAA
Trigger: CGCAGCTCTTCGGGAATCTCAGCAGGTTGCTCTGGA...GATGCAGGAGCCCTTTGGTTGCACCTGATGCATTATTGTGAAGCATGTACAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000592272.5
CDS-3UTR TCA 90 bp TCGACAGGGGCAAGTGATGTGAATGAGGCTAGGGTCAGGGCCCGAGGGAATGCACATTCACTAAGGCCGTaGTCAAGTTTTCTGCATGTA +
Preference number: 4 (lower is better)
Translates to: STGASDVNEARVRARGNAHSLRP*SSFLHV
Trigger: TACATGCAGAAAACTTGATCACGGCCTTAGTGAATG...TGCATTCCCTCGGGCCCTGACCCTAGCCTCATTCACATCACTTGCCCCTGTCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR TCA 90 bp GTCAGGGTGCAGGTCCTTCCATGGCAGTTTCCGGTACGTGCTATGGAAAGCGTAGCGGGTAATGGCTGCTaGAATAACTTAGCACACTCT +
Preference number: 4 (lower is better)
Translates to: VRVQVLPWQFPVRAMESVAGNGC*NNLAHS
Trigger: AGAGTGTGCTAAGTTATTTCAGCAGCCATTACCCGC...TACGCTTTCCATAGCACGTACCGGAAACTGCCATGGAAGGACCTGCACCCTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000592272.5
CDS-3UTR TCA 90 bp ATTAATAGGCAGTGGGACAACATGATTCCGGGATGCAGCCTGCCTCTGCAACCCAATGGGTCCCCATCCTaGATTCTGATTGAGAGGGCT +
Preference number: 4 (lower is better)
Translates to: INRQWDNMIPGCSLPLQPNGSPS*ILIERA
Trigger: AGCCCTCTCAATCAGAATTCAGGATGGGGACCCATT...GGGTTGCAGAGGCAGGCTGCATCCCGGAATCATGTTGTCCCACTGCCTATTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR TCA 90 bp TGCTTCTGGCTGTCAGTAGGAATAGAAAGGCCCGCAGACACTTTTAGGAGCTTCGTGAGCTCGGGAACCTaGAGGGATACCAGAATGGGT +
Preference number: 4 (lower is better)
Translates to: CFWLSVGIERPADTFRSFVSSGT*RDTRMG
Trigger: ACCCATTCTGGTATCCCTTCAGGTTCCCGAGCTCAC...GAAGCTCCTAAAAGTGTCTGCGGGCCTTTCTATTCCTACTGACAGCCAGAAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR TCA 90 bp GGTCCGGATACTGCCCCGAAGGAACTCTGCTGTTGGAATAGTCGCGTTGTTCATAGGTTCTGCCTGCTCTaGACCAAGAGCAGAATTCGA +
Preference number: 4 (lower is better)
Translates to: GPDTAPKELCCWNSRVVHRFCLL*TKSRIR
Trigger: TCGAATTCTGCTCTTGGTTCAGAGCAGGCAGAACCT...ATGAACAACGCGACTATTCCAACAGCAGAGTTCCTTCGGGGCAGTATCCGGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR TCA 90 bp GTCCCGAGTGTGCAGGAAGGAGCTTTGGAAACATGTACAGGTGGGTCCCGAATCCTAGAGCTGATAGAATaGGGAACGTGGGAACAGAAG +
Preference number: 4 (lower is better)
Translates to: VPSVQEGALETCTGGSRILELIE*GTWEQK
Trigger: CTTCTGTTCCCACGTTCCTCATTCTATCAGCTCTAG...GATTCGGGACCCACCTGTACATGTTTCCAAAGCTCCTTCCTGCACACTCGGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR TCA 90 bp GGTCCCGAGTGTGCAGGAAGGAGCTTTGGAAACATGTACAGGTGGGTCCCGAATCTAGAGCTGATAGAATaGGGAACGTGGGAACAGAAG +
Preference number: 4 (lower is better)
Translates to: GPECAGRSFGNMYRWVPNLELIE*GTWEQK
Trigger: CTTCTGTTCCCACGTTCCTCATTCTATCAGCTCTAG...ATTCGGGACCCACCTGTACATGTTTCCAAAGCTCCTTCCTGCACACTCGGGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR TCA 90 bp GGGGCAAGTGATGTGAATGAGGCTAGGGTCAGGGCCCGAGGGAATGCACAGACTTTCCAAAAGGACATTTaGGGAGAGATTAGCACTCTG +
Preference number: 4 (lower is better)
Translates to: GASDVNEARVRARGNAQTFQKDI*GEISTL
Trigger: CAGAGTGCTAATCTCTCCTCAAATGTCCTTTTGGAA...AGTCTGTGCATTCCCTCGGGCCCTGACCCTAGCCTCATTCACATCACTTGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR TCA 90 bp ACAGATCCCTCTGAGACGGACATTTTGTGGCCTGTAAAACTCAAGAGACTAAACGTCACGCCTTGGAGCTaGGGTCCCGAGTGTGCAGGA +
Preference number: 4 (lower is better)
Translates to: TDPSETDILWPVKLKRLNVTPWS*GPECAG
Trigger: TCCTGCACACTCGGGACCTCAGCTCCAAGGCGTGAC...GTTTAGTCTCTTGAGTTTTACAGGCCACAAAATGTCCGTCTCAGAGGGATCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR TCA 90 bp GGTCCCGAGTGTGCAGGAAGGAGCTTTGGAAACATGTACAGGTGGGTCCCGAATTTGTTAGGCCTGTCATaGAGATGTGGGGTGAGATCT +
Preference number: 4 (lower is better)
Translates to: GPECAGRSFGNMYRWVPNLLGLS*RCGVRS
Trigger: AGATCTCACCCCACATCTTCATGACAGGCCTAACAA...ATTCGGGACCCACCTGTACATGTTTCCAAAGCTCCTTCCTGCACACTCGGGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR GCA 90 bp ACAGATCCCTCTGAGACGGACATTTTGTGGCCTGTAAAACTCAAGAGACTAAACGCGCTTCAAGCAACCTaGCCGGTTCTGGCCTCCGGA +
Preference number: 4 (lower is better)
Translates to: TDPSETDILWPVKLKRLNALQAT*PVLASG
Trigger: TCCGGAGGCCAGAACCGGGCAGGTTGCTTGAAGCGC...GTTTAGTCTCTTGAGTTTTACAGGCCACAAAATGTCCGTCTCAGAGGGATCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR GCA 90 bp GGGGCAAGTGATGTGAATGAGGCTAGGGTCAGGGCCCGAGGGAATGCACAGACTACCCCTGATGGGTTATaGAACACTTTGATCTGGATA +
Preference number: 4 (lower is better)
Translates to: GASDVNEARVRARGNAQTTPDGL*NTLIWI
Trigger: TATCCAGATCAAAGTGTTGCATAACCCATCAGGGGT...AGTCTGTGCATTCCCTCGGGCCCTGACCCTAGCCTCATTCACATCACTTGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR GCA 90 bp GTCCCGAGTGTGCAGGAAGGAGCTTTGGAAACATGTACAGGTGGGTCCCGAATCAGCTTCCACAGCATTTaGACAGACAGAGTCCCAAAG +
Preference number: 4 (lower is better)
Translates to: VPSVQEGALETCTGGSRISFHSI*TDRVPK
Trigger: CTTTGGGACTCTGTCTGTGCAAATGCTGTGGAAGCT...GATTCGGGACCCACCTGTACATGTTTCCAAAGCTCCTTCCTGCACACTCGGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR GCA 90 bp ACAGATCCCTCTGAGACGGACATTTTGTGGCCTGTAAAACTCAAGAGACTAAACTCTGGGTCTTGGAGCTaGTGCTTGCACTGGGCGGGC +
Preference number: 4 (lower is better)
Translates to: TDPSETDILWPVKLKRLNSGSWS*CLHWAG
Trigger: GCCCGCCCAGTGCAAGCAGCAGCTCCAAGACCCAGA...GTTTAGTCTCTTGAGTTTTACAGGCCACAAAATGTCCGTCTCAGAGGGATCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR GCA 90 bp AATTTCAGTAGATCTCCCGACCTGACCCAGTTTCCACAGACAAGTGTTTCAGCACTGGCAGCCCTTCACTaGCCTCTGCTGGAACACGGA +
Preference number: 4 (lower is better)
Translates to: NFSRSPDLTQFPQTSVSALAALH*PLLEHG
Trigger: TCCGTGTTCCAGCAGAGGGCAGTGAAGGGCTGCCAG...TGCTGAAACACTTGTCTGTGGAAACTGGGTCAGGTCGGGAGATCTACTGAAATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR GCA 90 bp GCCCCGAAGGAACTCTGCTGTTGGAATAGTCGCGTTGTTCATCATCATCAGGACCTCACCAGCTCCTTGTaGAGTTCTGGTGAAGTCAGG +
Preference number: 4 (lower is better)
Translates to: APKELCCWNSRVVHHHQDLTSSL*SSGEVR
Trigger: CCTGACTTCACCAGAACTGCACAAGGAGCTGGTGAG...GTCCTGATGATGATGAACAACGCGACTATTCCAACAGCAGAGTTCCTTCGGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR GCA 90 bp AGCCACGAGGTTCTGCCTGCTCTGAACCAAGAGCAGAATTCGAATGACAGATTCGCTGCACGGACAAACTaGAGGGTGTGGAATGGGACT +
Preference number: 4 (lower is better)
Translates to: SHEVLPALNQEQNSNDRFAARTN*RVWNGT
Trigger: AGTCCCATTCCACACCCTGCAGTTTGTCCGTGCAGC...GAATCTGTCATTCGAATTCTGCTCTTGGTTCAGAGCAGGCAGAACCTCGTGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR GCA 90 bp CACCTGCAAGCAAGCACCAACTTAAATGTATGCCCCAGGTGCCTCATTTGTCTCAGATTCCCGAAGAGCTaGGGTTCTGGCCTGCTGTTG +
Preference number: 4 (lower is better)
Translates to: HLQASTNLNVCPRCLICLRFPKS*GSGLLL
Trigger: CAACAGCAGGCCAGAACCGCAGCTCTTCGGGAATCT...GAGACAAATGAGGCACCTGGGGCATACATTTAAGTTGGTGCTTGCTTGCAGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR GCA 90 bp ATTAATAGGCAGTGGGACAACATGATTCCGGGATGCAGCCTGCCTCTGCAACCCGGCATTTCTTACCGCTaGTGCCTCTGCACTCCAAAT +
Preference number: 4 (lower is better)
Translates to: INRQWDNMIPGCSLPLQPGISYR*CLCTPN
Trigger: ATTTGGAGTGCAGAGGCAGCAGCGGTAAGAAATGCC...GGGTTGCAGAGGCAGGCTGCATCCCGGAATCATGTTGTCCCACTGCCTATTAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR GCA 90 bp ACACTCGGGGCTCAGAAGCTGCTCCGCGGAGCTTTGCATAAGCAGCCTGAGAATCGTGATCAAGTTTTCTaGATGTACAGCAGCTTCCAC +
Preference number: 4 (lower is better)
Translates to: TLGAQKLLRGALHKQPENRDQVF*MYSSFH
Trigger: GTGGAAGCTGCTGTACATGCAGAAAACTTGATCACG...ATTCTCAGGCTGCTTATGCAAAGCTCCGCGGAGCAGCTTCTGAGCCCCGAGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000590884.5
CDS-3UTR GCA 90 bp CATGCTGCGGGTTTCTGGGTGGGGACTGGAATTCCAGGCATCAGAGAGCACACTTATGAACTCTGCAGGTaGAGCATTGGGAGTGAAGAA +
Preference number: 4 (lower is better)
Translates to: HAAGFWVGTGIPGIREHTYELCR*SIGSEE
Trigger: TTCTTCACTCCCAATGCTGCACCTGCAGAGTTCATA...AGTGTGCTCTCTGATGCCTGGAATTCCAGTCCCCACCCAGAAACCCGCAGCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR GCA 90 bp TTTTGGCCAATCCAGGTCCGGATACTGCCCCGAAGGAACTCTGCTGTTGGAATATGCTCCGCGGAGCTTTaGATAAGCAGCCTGAGAATG +
Preference number: 4 (lower is better)
Translates to: FWPIQVRILPRRNSAVGICSAEL*ISSLRM
Trigger: CATTCTCAGGCTGCTTATGCAAAGCTCCGCGGAGCA...TATTCCAACAGCAGAGTTCCTTCGGGGCAGTATCCGGACCTGGATTGGCCAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR GCA 90 bp GGGTGCAGGTCCTTCCATGGCAGTTTCCGGTACGTGCTATGGAAAGCGTACAGAGCAGTTTCCGGTACGTaGTATGGAAAGCGTACAGAA +
Preference number: 4 (lower is better)
Translates to: GCRSFHGSFRYVLWKAYRAVSGT*YGKRTE
Trigger: TTCTGTACGCTTTCCATAGCACGTACCGGAAACTGC...TCTGTACGCTTTCCATAGCACGTACCGGAAACTGCCATGGAAGGACCTGCACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000592272.5
CDS-3UTR GCA 90 bp TTCTGGCTGTCAGTAGGAATAGAAAGGCCCGCAGACACTTTTAGGAGCTTCATGGGCAGACAATCATGCTaGGGGTTTCTGGGTGGGGAC +
Preference number: 4 (lower is better)
Translates to: FWLSVGIERPADTFRSFMGRQSC*GFLGGD
Trigger: GTCCCCACCCAGAAACCCGCAGCATGATTGTCTGCC...CATGAAGCTCCTAAAAGTGTCTGCGGGCCTTTCTATTCCTACTGACAGCCAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR GCA 90 bp TGCTGTACATGCTTCACAATAATGCATCAGGTGCAACCAAAGGGCTCCTGCATCGGAGGCAGACAATCATaGTGCGGGTTTCTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: CCTCFTIMHQVQPKGSCIGGRQS*CGFLGG
Trigger: CCCACCCAGAAACCCGCAGCATGATTGTCTGCCTCC...GATGCAGGAGCCCTTTGGTTGCACCTGATGCATTATTGTGAAGCATGTACAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000592272.5
CDS-3UTR GCA 90 bp GGTCCCGAGTGTGCAGGAAGGAGCTTTGGAAACATGTACAGGTGGGTCCCGAATAGCATAAGATTCTTTTaGCAGGATGATGGACGGCGG +
Preference number: 4 (lower is better)
Translates to: GPECAGRSFGNMYRWVPNSIRFF*QDDGRR
Trigger: CCGCCGTCCATCATCCTGGCAAAAGAATCTTATGCT...ATTCGGGACCCACCTGTACATGTTTCCAAAGCTCCTTCCTGCACACTCGGGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR GCA 90 bp GGTCCCGAGTGTGCAGGAAGGAGCTTTGGAAACATGTACAGGTGGGTCCCGAATGGAACTGCATCAAGATaGTTCTGGCTGTCAGTAGGA +
Preference number: 4 (lower is better)
Translates to: GPECAGRSFGNMYRWVPNGTASR*FWLSVG
Trigger: TCCTACTGACAGCCAGAAGCATCTTGATGCAGTTCC...ATTCGGGACCCACCTGTACATGTTTCCAAAGCTCCTTCCTGCACACTCGGGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR GCA 90 bp CTCCGCGGAGCTTTGCATAAGCAGCCTGAGAATGTCACTGTACTGGTCAGGAAACCACGAGGTTCTGCCTaGTCTGAACCAAGAGCAGAA +
Preference number: 4 (lower is better)
Translates to: LRGALHKQPENVTVLVRKPRGSA*SEPRAE
Trigger: TTCTGCTCTTGGTTCAGAGCAGGCAGAACCTCGTGG...TTTCCTGACCAGTACAGTGACATTCTCAGGCTGCTTATGCAAAGCTCCGCGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000590884.5
CDS-3UTR GCA 90 bp ATGTCTGAACTAGCTCAGTGTCTTTATAGCACGTTCCTAGCCCAGAGTTTCCCACCGGCCAAACCCAATTaGCCCCAGGATCCCAGAGCT +
Preference number: 4 (lower is better)
Translates to: MSELAQCLYSTFLAQSFPPAKPN*PQDPRA
Trigger: AGCTCTGGGATCCTGGGGGCAATTGGGTTTGGCCGG...TGGGAAACTCTGGGCTAGGAACGTGCTATAAAGACACTGAGCTAGTTCAGACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR GCA 90 bp AATTTCAGTAGATCTCCCGACCTGACCCAGTTTCCACAGACAAGTGTTTCAGCAGATGCAGCCTGCCTCTaGAACCCACCTGTGCACTGC +
Preference number: 4 (lower is better)
Translates to: NFSRSPDLTQFPQTSVSADAACL*NPPVHC
Trigger: GCAGTGCACAGGTGGGTTGCAGAGGCAGGCTGCATC...TGCTGAAACACTTGTCTGTGGAAACTGGGTCAGGTCGGGAGATCTACTGAAATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR GCA 90 bp TCGACAGGGGCAAGTGATGTGAATGAGGCTAGGGTCAGGGCCCGAGGGAATGCACCACTGCTACTGTCATaGTATGTAGACAGTTGTGTA +
Preference number: 4 (lower is better)
Translates to: STGASDVNEARVRARGNAPLLLS*YVDSCV
Trigger: TACACAACTGTCTACATAGCATGACAGTAGCAGTGG...TGCATTCCCTCGGGCCCTGACCCTAGCCTCATTCACATCACTTGCCCCTGTCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR GCA 90 bp CATTCGGCAACTGTGAGTGGCTCTGCACCCAAGTGGAACTTAGTAAGTTTCTCTCCGAGACCATGCCATTaGACTCCAGCCTGGGTGACA +
Preference number: 4 (lower is better)
Translates to: HSATVSGSAPKWNLVSFSPRPCH*TPAWVT
Trigger: TGTCACCCAGGCTGGAGTGCAATGGCATGGTCTCGG...AGAGAAACTTACTAAGTTCCACTTGGGTGCAGAGCCACTCACAGTTGCCGAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR GCA 90 bp TCGACAGGGGCAAGTGATGTGAATGAGGCTAGGGTCAGGGCCCGAGGGAATGCAACCAACTTAAATGTATaGCCCAGGTGCCTCATTTGT +
Preference number: 4 (lower is better)
Translates to: STGASDVNEARVRARGNATNLNV*PRCLIC
Trigger: ACAAATGAGGCACCTGGGGCATACATTTAAGTTGGT...TGCATTCCCTCGGGCCCTGACCCTAGCCTCATTCACATCACTTGCCCCTGTCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR GCA 90 bp GTCCCGAGTGTGCAGGAAGGAGCTTTGGAAACATGTACAGGTGGGTCCCGAATCGGATTAAGGGCAAAGTaGCTTGTTGTTAGGCCTGTC +
Preference number: 4 (lower is better)
Translates to: VPSVQEGALETCTGGSRIGLRAK*LVVRPV
Trigger: GACAGGCCTAACAACAAGGCACTTTGCCCTTAATCC...GATTCGGGACCCACCTGTACATGTTTCCAAAGCTCCTTCCTGCACACTCGGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CCA 90 bp GGGGCAAGTGATGTGAATGAGGCTAGGGTCAGGGCCCGAGGGAATGCACAGACTGTTACCACCTTCAGATaGTCTCCTTTGAATTCACAG +
Preference number: 4 (lower is better)
Translates to: GASDVNEARVRARGNAQTVTTFR*SPLNSQ
Trigger: CTGTGAATTCAAAGGAGACCATCTGAAGGTGGTAAC...AGTCTGTGCATTCCCTCGGGCCCTGACCCTAGCCTCATTCACATCACTTGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CCA 90 bp ATTAATAGGCAGTGGGACAACATGATTCCGGGATGCAGCCTGCCTCTGCAACCCCACTGCCACCAAAGCTaGTGCTTCTCCAGCAATTTC +
Preference number: 4 (lower is better)
Translates to: INRQWDNMIPGCSLPLQPHCHQS*CFSSNF
Trigger: GAAATTGCTGGAGAAGCACCAGCTTTGGTGGCAGTG...GGGTTGCAGAGGCAGGCTGCATCCCGGAATCATGTTGTCCCACTGCCTATTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CCA 90 bp AATTTCAGTAGATCTCCCGACCTGACCCAGTTTCCACAGACAAGTGTTTCAGCACGTTGTCCCCATGGCTaGCTCCTGTCAGGTGCTGTG +
Preference number: 4 (lower is better)
Translates to: NFSRSPDLTQFPQTSVSARCPHG*LLSGAV
Trigger: CACAGCACCTGACAGGAGCCAGCCATGGGGACAACG...TGCTGAAACACTTGTCTGTGGAAACTGGGTCAGGTCGGGAGATCTACTGAAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CCA 90 bp GGTCCGGATACTGCCCCGAAGGAACTCTGCTGTTGGAATAGTCGCGTTGTTCATGCTTTCTTCAGAGCTTaGTCAGGGGTGAAAGCAGAG +
Preference number: 4 (lower is better)
Translates to: GPDTAPKELCCWNSRVVHAFFRA*SGVKAE
Trigger: CTCTGCTTTCACCCCTGACCAAGCTCTGAAGAAAGC...ATGAACAACGCGACTATTCCAACAGCAGAGTTCCTTCGGGGCAGTATCCGGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CCA 90 bp AGACAATCATGCTGCGGGTTTCTGGGTGGGGACTGGAATTCCAGGCATCAGAGAGCTTTCTTCAGAGCTTaGTCAGGGGTGAAAGCAGAG +
Preference number: 4 (lower is better)
Translates to: RQSCCGFLGGDWNSRHQRAFFRA*SGVKAE
Trigger: CTCTGCTTTCACCCCTGACCAAGCTCTGAAGAAAGC...TCTCTGATGCCTGGAATTCCAGTCCCCACCCAGAAACCCGCAGCATGATTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CCA 90 bp GCTGTTGGAATAGTCGCGTTGTTCATCATCATCAGGACTTCCATAAAGAGGCTGGGAGGGATGGCACGATaGGGAGCTTCAGCTGGGTCT +
Preference number: 4 (lower is better)
Translates to: AVGIVALFIIIRTSIKRLGGMAR*GASAGS
Trigger: AGACCCAGCTGAAGCTCCCCATCGTGCCATCCCTCC...CAGCCTCTTTATGGAAGTCCTGATGATGATGAACAACGCGACTATTCCAACAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CCA 90 bp TCGACAGGGGCAAGTGATGTGAATGAGGCTAGGGTCAGGGCCCGAGGGAATGCACAATACAACCATCTATaGGTAACCCATACTGTGGTC +
Preference number: 4 (lower is better)
Translates to: STGASDVNEARVRARGNAQYNHL*VTHTVV
Trigger: GACCACAGTATGGGTTACCCATAGATGGTTGTATTG...TGCATTCCCTCGGGCCCTGACCCTAGCCTCATTCACATCACTTGCCCCTGTCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CCA 90 bp TGCTGTACATGCTTCACAATAATGCATCAGGTGCAACCAAAGGGCTCCTGCATCTTCACTGCCCTCTGCTaGAACACGGAGGGCCTTGCT +
Preference number: 4 (lower is better)
Translates to: CCTCFTIMHQVQPKGSCIFTALC*NTEGLA
Trigger: AGCAAGGCCCTCCGTGTTCCAGCAGAGGGCAGTGAA...GATGCAGGAGCCCTTTGGTTGCACCTGATGCATTATTGTGAAGCATGTACAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000592272.5
CDS-3UTR CCA 90 bp AGACAATCATGCTGCGGGTTTCTGGGTGGGGACTGGAATTCCAGGCATCAGAGACTGGCAGTTGGGTCTTaGGCCAAACAGGTCATTTCT +
Preference number: 4 (lower is better)
Translates to: RQSCCGFLGGDWNSRHQRLAVGS*AKQVIS
Trigger: AGAAATGACCTGTTTGGCCCAAGACCCAACTGCCAG...TCTCTGATGCCTGGAATTCCAGTCCCCACCCAGAAACCCGCAGCATGATTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CCA 90 bp GCCCCGAAGGAACTCTGCTGTTGGAATAGTCGCGTTGTTCATCATCATCAGGACTTTCCTGCTGGCAGTTaGGTCTTGGGCCAAACAGGT +
Preference number: 4 (lower is better)
Translates to: APKELCCWNSRVVHHHQDFPAGS*VLGQTG
Trigger: ACCTGTTTGGCCCAAGACCCAACTGCCAGCAGGAAA...GTCCTGATGATGATGAACAACGCGACTATTCCAACAGCAGAGTTCCTTCGGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CCA 90 bp GATACTGCCCCGAAGGAACTCTGCTGTTGGAATAGTCGCGTTGTTCATCATCATCTGCGGGTTTCTGGGTaGGGACTGGAATTCCAGGCA +
Preference number: 4 (lower is better)
Translates to: DTAPKELCCWNSRVVHHHLRVSG*GLEFQA
Trigger: TGCCTGGAATTCCAGTCCCCACCCAGAAACCCGCAG...ATGATGATGAACAACGCGACTATTCCAACAGCAGAGTTCCTTCGGGGCAGTATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CCA 90 bp CGGTTCTGGCCTGCTGTTGCAACAGATTCAGGTCTGTGCACACCAGCTGGGTGGGCATCAAGATGCTTCTaGCTGTCAGTAGGAATAGAA +
Preference number: 4 (lower is better)
Translates to: RFWPAVATDSGLCTPAGWASRCF*LSVGIE
Trigger: TTCTATTCCTACTGACAGCCAGAAGCATCTTGATGC...CCACCCAGCTGGTGTGCACAGACCTGAATCTGTTGCAACAGCAGGCCAGAACCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587884.1
CDS-3UTR CCA 90 bp AATGACAGATTCTGTCAGGACGGAGTCATTCTGCTCTGTCTGAATGAGGGAGAGACGGACGCCAGGCTCTaGCAGGCTGCTGTTAAAAGG +
Preference number: 4 (lower is better)
Translates to: NDRFCQDGVILLCLNEGETDARL*QAAVKR
Trigger: CCTTTTAACAGCAGCCTGCCAGAGCCTGGCGTCCGT...CTCTCCCTCATTCAGACAGAGCAGAATGACTCCGTCCTGACAGAATCTGTCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CCA 90 bp CATTCGGCAACTGTGAGTGGCTCTGCACCCAAGTGGAACTTAGTAAGTTTCTCTACGGACGCCAGGCTCTaGCAGGCTGCTGTTAAAAGG +
Preference number: 4 (lower is better)
Translates to: HSATVSGSAPKWNLVSFSTDARL*QAAVKR
Trigger: CCTTTTAACAGCAGCCTGCCAGAGCCTGGCGTCCGT...AGAGAAACTTACTAAGTTCCACTTGGGTGCAGAGCCACTCACAGTTGCCGAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CCA 90 bp GTCCCGAGTGTGCAGGAAGGAGCTTTGGAAACATGTACAGGTGGGTCCCGAATCGAAGGGATACCAGAATaGGTCCCCATCCTGAATTCT +
Preference number: 4 (lower is better)
Translates to: VPSVQEGALETCTGGSRIEGIPE*VPILNS
Trigger: AGAATTCAGGATGGGGACCCATTCTGGTATCCCTTC...GATTCGGGACCCACCTGTACATGTTTCCAAAGCTCCTTCCTGCACACTCGGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CCA 90 bp CACCTGCAAGCAAGCACCAACTTAAATGTATGCCCCAGGTGCCTCATTTGTCTCTTCCTCCACGGAGCTTaGGTACACCTGTTCCAGCCA +
Preference number: 4 (lower is better)
Translates to: HLQASTNLNVCPRCLICLFLHGA*VHLFQP
Trigger: TGGCTGGAACAGGTGTACCCAAGCTCCGTGGAGGAA...GAGACAAATGAGGCACCTGGGGCATACATTTAAGTTGGTGCTTGCTTGCAGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CCA 90 bp TCGACAGGGGCAAGTGATGTGAATGAGGCTAGGGTCAGGGCCCGAGGGAATGCAGAGACGGACATTTTGTaGCCTGTAAAACTCAAGAGA +
Preference number: 4 (lower is better)
Translates to: STGASDVNEARVRARGNAETDIL*PVKLKR
Trigger: TCTCTTGAGTTTTACAGGCCACAAAATGTCCGTCTC...TGCATTCCCTCGGGCCCTGACCCTAGCCTCATTCACATCACTTGCCCCTGTCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CCA 90 bp GGTCCCGAGTGTGCAGGAAGGAGCTTTGGAAACATGTACAGGTGGGTCCCGAATGATAATTATGCCACTTaGACCACACTGGTGCGACTC +
Preference number: 4 (lower is better)
Translates to: GPECAGRSFGNMYRWVPNDNYAT*TTLVRL
Trigger: GAGTCGCACCAGTGTGGTCCAAGTGGCATAATTATC...ATTCGGGACCCACCTGTACATGTTTCCAAAGCTCCTTCCTGCACACTCGGGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CCA 90 bp ATTAATAGGCAGTGGGACAACATGATTCCGGGATGCAGCCTGCCTCTGCAACCCCCTGTCATGAAGATGTaGGGTGAGATCTGTCTTGGG +
Preference number: 4 (lower is better)
Translates to: INRQWDNMIPGCSLPLQPPVMKM*GEICLG
Trigger: CCCAAGACAGATCTCACCCCACATCTTCATGACAGG...GGGTTGCAGAGGCAGGCTGCATCCCGGAATCATGTTGTCCCACTGCCTATTAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CCA 90 bp GGTCCGGATACTGCCCCGAAGGAACTCTGCTGTTGGAATAGTCGCGTTGTTCATGGCTCCTGCATCACCTaGCAACAGCTTATCTTTCGT +
Preference number: 4 (lower is better)
Translates to: GPDTAPKELCCWNSRVVHGSCIT*QQLIFR
Trigger: ACGAAAGATAAGCTGTTGCCAGGTGATGCAGGAGCC...ATGAACAACGCGACTATTCCAACAGCAGAGTTCCTTCGGGGCAGTATCCGGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592272.5
CDS-3UTR TCA 90 bp GTCCCGAGTGTGCAGGAAGGAGCTTTGGAAACATGTACAGGTGGGTCCCGAATCTTTCCTCTACCTCTGTaGAGTTCTTGGGGGTTTCTA +
Preference number: 4 (lower is better)
Translates to: VPSVQEGALETCTGGSRIFPLPL*SSWGFL
Trigger: TAGAAACCCCCAAGAACTTCACAGAGGTAGAGGAAA...GATTCGGGACCCACCTGTACATGTTTCCAAAGCTCCTTCCTGCACACTCGGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR TCA 90 bp GGGGCAAGTGATGTGAATGAGGCTAGGGTCAGGGCCCGAGGGAATGCACAGACTAAAATGAAAGACCCCTaGTGGGTTATGCAACACTTT +
Preference number: 4 (lower is better)
Translates to: GASDVNEARVRARGNAQTKMKDP*WVMQHF
Trigger: AAAGTGTTGCATAACCCATCAGGGGTCTTTCATTTT...AGTCTGTGCATTCCCTCGGGCCCTGACCCTAGCCTCATTCACATCACTTGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR TCA 90 bp CATTCGGCAACTGTGAGTGGCTCTGCACCCAAGTGGAACTTAGTAAGTTTCTCTGGCCCATTGGTTAAATaGGGTCTCGGGTGTCTCTCC +
Preference number: 4 (lower is better)
Translates to: HSATVSGSAPKWNLVSFSGPLVK*GLGCLS
Trigger: GGAGAGACACCCGAGACCTCATTTAACCAATGGGCC...AGAGAAACTTACTAAGTTCCACTTGGGTGCAGAGCCACTCACAGTTGCCGAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR TCA 90 bp GTCCCGAGTGTGCAGGAAGGAGCTTTGGAAACATGTACAGGTGGGTCCCGAATCTCTTCCTGCATCAGCTaGAAAGCTGCTTTACACAAG +
Preference number: 4 (lower is better)
Translates to: VPSVQEGALETCTGGSRISSCIS*KAALHK
Trigger: CTTGTGTAAAGCAGCTTTTCAGCTGATGCAGGAAGA...GATTCGGGACCCACCTGTACATGTTTCCAAAGCTCCTTCCTGCACACTCGGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR TCA 90 bp AGTGTTAGAAAGGCGCTTCCTTACCTGTTAGACAAAGGCGACTTCCGGCCAAACAGAACTTCTGCCAAATaGGTGGCAGGAGGGGGTGAT +
Preference number: 4 (lower is better)
Translates to: SVRKALPYLLDKGDFRPNRTSAK*VAGGGD
Trigger: ATCACCCCCTCCTGCCACTCATTTGGCAGAAGTTCT...GTTTGGCCGGAAGTCGCCTTTGTCTAACAGGTAAGGAAGCGCCTTTCTAACACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR TCA 90 bp TTTCCGGTACGTGCTATGGAAAGCGTACAGAATGAACTCTGGCATTTTGGGTGCCTTCAAACTGAACCGTaGCAACTGCGGCTCCTTGGC +
Preference number: 4 (lower is better)
Translates to: FPVRAMESVQNELWHFGCLQTEP*QLRLLG
Trigger: GCCAAGGAGCCGCAGTTGTCACGGTTCAGTTTGAAG...GCACCCAAAATGCCAGAGTTCATTCTGTACGCTTTCCATAGCACGTACCGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000592272.5
CDS-3UTR TCA 90 bp TTAGACAAAGGCGACTTCCGGCCAAACCCAATTGCCCCCAGGATCCCAGAGCTGCATTCACTAAGGCCGTaGTCAAGTTTTCTGCATGTA +
Preference number: 4 (lower is better)
Translates to: LDKGDFRPNPIAPRIPELHSLRP*SSFLHV
Trigger: TACATGCAGAAAACTTGATCACGGCCTTAGTGAATG...CAGCTCTGGGATCCTGGGGGCAATTGGGTTTGGCCGGAAGTCGCCTTTGTCTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR TCA 90 bp TCCTCGTTCCACTTTGAAGAAGGCCTCCATGAGCATCTGGTCAGGGTGCAGGTCAGTCAATACAGTCAGTaGACAGCTGCACAATGCTTG +
Preference number: 4 (lower is better)
Translates to: SSFHFEEGLHEHLVRVQVSQYSQ*TAAQCL
Trigger: CAAGCATTGTGCAGCTGTTCACTGACTGTATTGACT...GACCTGCACCCTGACCAGATGCTCATGGAGGCCTTCTTCAAAGTGGAACGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587884.1
CDS-3UTR TCA 90 bp TCGACAGGGGCAAGTGATGTGAATGAGGCTAGGGTCAGGGCCCGAGGGAATGCAGTTTGGTCTACCAGTTaGACTTCCTTTGCCAATAAA +
Preference number: 4 (lower is better)
Translates to: STGASDVNEARVRARGNAVWSTS*TSFANK
Trigger: TTTATTGGCAAAGGAAGTTCAACTGGTAGACCAAAC...TGCATTCCCTCGGGCCCTGACCCTAGCCTCATTCACATCACTTGCCCCTGTCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR TCA 90 bp TCGACAGGGGCAAGTGATGTGAATGAGGCTAGGGTCAGGGCCCGAGGGAATGCACTAGGACTGCTAAGGTaGTTTTTCCATTTTGTTCCA +
Preference number: 4 (lower is better)
Translates to: STGASDVNEARVRARGNALGLLR*FFHFVP
Trigger: TGGAACAAAATGGAAAAATCACCTTAGCAGTCCTAG...TGCATTCCCTCGGGCCCTGACCCTAGCCTCATTCACATCACTTGCCCCTGTCGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR TCA 90 bp AGACAATCATGCTGCGGGTTTCTGGGTGGGGACTGGAATTCCAGGCATCAGAGACCCCATCCTGAATTCTaGTTGAGAGGGCTTTCTTTG +
Preference number: 4 (lower is better)
Translates to: RQSCCGFLGGDWNSRHQRPHPEF*LRGLSL
Trigger: CAAAGAAAGCCCTCTCAATCAGAATTCAGGATGGGG...TCTCTGATGCCTGGAATTCCAGTCCCCACCCAGAAACCCGCAGCATGATTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR TCA 90 bp TTTCCGGTACGTGCTATGGAAAGCGTACAGAATGAACTCTGGCATTTTGGGTGCAGTAACTGCCCAAGGTaGGGCACTCCTGCAGGAACT +
Preference number: 4 (lower is better)
Translates to: FPVRAMESVQNELWHFGCSNCPR*GTPAGT
Trigger: AGTTCCTGCAGGAGTGCCTCACCTTGGGCAGTTACT...GCACCCAAAATGCCAGAGTTCATTCTGTACGCTTTCCATAGCACGTACCGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000592272.5
CDS-3UTR TCA 90 bp CATTCGGCAACTGTGAGTGGCTCTGCACCCAAGTGGAACTTAGTAAGTTTCTCTGCATTCAGAGCCTGCTaGGCTTTGGGGGTCAGATGT +
Preference number: 4 (lower is better)
Translates to: HSATVSGSAPKWNLVSFSAFRAC*ALGVRC
Trigger: ACATCTGACCCCCAAAGCTCAGCAGGCTCTGAATGC...AGAGAAACTTACTAAGTTCCACTTGGGTGCAGAGCCACTCACAGTTGCCGAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR TCA 90 bp AATTTCAGTAGATCTCCCGACCTGACCCAGTTTCCACAGACAAGTGTTTCAGCACAGGCAGCTTCTCCATaGGGATACACGGCTGGATGG +
Preference number: 4 (lower is better)
Translates to: NFSRSPDLTQFPQTSVSAQAASP*GYTAGW
Trigger: CCATCCAGCCGTGTATCCTCATGGAGAAGCTGCCTG...TGCTGAAACACTTGTCTGTGGAAACTGGGTCAGGTCGGGAGATCTACTGAAATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR TCA 90 bp ATGTCTGAACTAGCTCAGTGTCTTTATAGCACGTTCCTAGCCCAGAGTTTCCCACAGGCAGCTTCTCCATaGGGATACACGGCTGGATGG +
Preference number: 4 (lower is better)
Translates to: MSELAQCLYSTFLAQSFPQAASP*GYTAGW
Trigger: CCATCCAGCCGTGTATCCTCATGGAGAAGCTGCCTG...TGGGAAACTCTGGGCTAGGAACGTGCTATAAAGACACTGAGCTAGTTCAGACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR TCA 90 bp ACAGATCCCTCTGAGACGGACATTTTGTGGCCTGTAAAACTCAAGAGACTAAACGCTACTCCTGGACACTaGTGCCCGAGGCATGCTGTG +
Preference number: 4 (lower is better)
Translates to: TDPSETDILWPVKLKRLNATPGH*CPRHAV
Trigger: CACAGCATGCCTCGGGCATCAGTGTCCAGGAGTAGC...GTTTAGTCTCTTGAGTTTTACAGGCCACAAAATGTCCGTCTCAGAGGGATCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR GCA 90 bp ATGTCTGAACTAGCTCAGTGTCTTTATAGCACGTTCCTAGCCCAGAGTTTCCCAGACCTTTGGAGTGACTaGACTGTCCCCCACACAGGG +
Preference number: 4 (lower is better)
Translates to: MSELAQCLYSTFLAQSFPDLWSD*TVPHTG
Trigger: CCCTGTGTGGGGGACAGTGCAGTCACTCCAAAGGTC...TGGGAAACTCTGGGCTAGGAACGTGCTATAAAGACACTGAGCTAGTTCAGACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR GCA 90 bp ATGTCTGAACTAGCTCAGTGTCTTTATAGCACGTTCCTAGCCCAGAGTTTCCCATCCTGTCAGGTGCTGTaGCACCTTGTGGGTGACCTG +
Preference number: 4 (lower is better)
Translates to: MSELAQCLYSTFLAQSFPSCQVL*HLVGDL
Trigger: CAGGTCACCCACAAGGTGGCACAGCACCTGACAGGA...TGGGAAACTCTGGGCTAGGAACGTGCTATAAAGACACTGAGCTAGTTCAGACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR GCA 90 bp GCGGGTTTCTGGGTGGGGACTGGAATTCCAGGCATCAGAGAGCACACTAACCCACATCAGCTGAAAAGCTaGTTTACACAAGTGGTCCAT +
Preference number: 4 (lower is better)
Translates to: AGFWVGTGIPGIREHTNPHQLKS*FTQVVH
Trigger: ATGGACCACTTGTGTAAAGCAGCTTTTCAGCTGATG...TGGGTTAGTGTGCTCTCTGATGCCTGGAATTCCAGTCCCCACCCAGAAACCCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR GCA 90 bp TTTTGGGTGCTGTACATGCTTCACAATAATGCATCAGGTGCAACCAAAGGGCTCACGGAGGGCCTTGCTTaGAGCATGGTGGAAGTCAGC +
Preference number: 4 (lower is better)
Translates to: FWVLYMLHNNASGATKGLTEGLA*SMVEVS
Trigger: GCTGACTTCCACCATGCTGCAAGCAAGGCCCTCCGT...GAGCCCTTTGGTTGCACCTGATGCATTATTGTGAAGCATGTACAGCACCCAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000592272.5
CDS-3UTR GCA 90 bp AATGACAGATTCTGTCAGGACGGAGTCATTCTGCTCTGTCTGAATGAGGGAGAGGAACACGGAGGGCCTTaGTTGCAGCATGGTGGAAGT +
Preference number: 4 (lower is better)
Translates to: NDRFCQDGVILLCLNEGEEHGGP*LQHGGS
Trigger: ACTTCCACCATGCTGCAAGCAAGGCCCTCCGTGTTC...CTCTCCCTCATTCAGACAGAGCAGAATGACTCCGTCCTGACAGAATCTGTCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR GCA 90 bp GCCCCGAAGGAACTCTGCTGTTGGAATAGTCGCGTTGTTCATCATCATCAGGACGGCTGGGGAGCCTCATaGTTCCGCAAGTTACTTAAA +
Preference number: 4 (lower is better)
Translates to: APKELCCWNSRVVHHHQDGWGAS*FRKLLK
Trigger: TTTAAGTAACTTGCGGAAGCATGAGGCTCCCCAGCC...GTCCTGATGATGATGAACAACGCGACTATTCCAACAGCAGAGTTCCTTCGGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR GCA 90 bp AATGACAGATTCTGTCAGGACGGAGTCATTCTGCTCTGTCTGAATGAGGGAGAGACAGATTCAGGTCTGTaGACACCAGCTGGGTGGCGT +
Preference number: 4 (lower is better)
Translates to: NDRFCQDGVILLCLNEGETDSGL*TPAGWR
Trigger: ACGCCACCCAGCTGGTGTGCACAGACCTGAATCTGT...CTCTCCCTCATTCAGACAGAGCAGAATGACTCCGTCCTGACAGAATCTGTCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR GCA 90 bp ACCACAAAAACAGCTTTGCCTCTTCCTCCACGGAGCTTGGGTACACCTGTTCCAGTTCTGGCCTGCTGTTaGAACAGATTCAGGTCTGTG +
Preference number: 4 (lower is better)
Translates to: TTKTALPLPPRSLGTPVPVLACC*NRFRSV
Trigger: CACAGACCTGAATCTGTTGCAACAGCAGGCCAGAAC...TGGAACAGGTGTACCCAAGCTCCGTGGAGGAAGAGGCAAAGCTGTTTTTGTGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR GCA 90 bp TGCTGTACATGCTTCACAATAATGCATCAGGTGCAACCAAAGGGCTCCTGCATCGCTGCGGTTCTGGCCTaGTGTTGCAACAGATTCAGG +
Preference number: 4 (lower is better)
Translates to: CCTCFTIMHQVQPKGSCIAAVLA*CCNRFR
Trigger: CCTGAATCTGTTGCAACAGCAGGCCAGAACCGCAGC...GATGCAGGAGCCCTTTGGTTGCACCTGATGCATTATTGTGAAGCATGTACAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000592272.5
CDS-3UTR GCA 90 bp CACCTGCAAGCAAGCACCAACTTAAATGTATGCCCCAGGTGCCTCATTTGTCTCTACCGCTGCTGCCTCTaGACTCCAAATGTAGTGTGG +
Preference number: 4 (lower is better)
Translates to: HLQASTNLNVCPRCLICLYRCCL*TPNVVW
Trigger: CCACACTACATTTGGAGTGCAGAGGCAGCAGCGGTA...GAGACAAATGAGGCACCTGGGGCATACATTTAAGTTGGTGCTTGCTTGCAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR GCA 90 bp ACCACAAAAACAGCTTTGCCTCTTCCTCCACGGAGCTTGGGTACACCTGTTCCACAGCTGTATGAACTCTaGAGGTGCAGCATTGGGAGT +
Preference number: 4 (lower is better)
Translates to: TTKTALPLPPRSLGTPVPQLYEL*RCSIGS
Trigger: ACTCCCAATGCTGCACCTGCAGAGTTCATACAGCTG...TGGAACAGGTGTACCCAAGCTCCGTGGAGGAAGAGGCAAAGCTGTTTTTGTGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR GCA 90 bp CATTCGGCAACTGTGAGTGGCTCTGCACCCAAGTGGAACTTAGTAAGTTTCTCTGCCCCAGGCAGTAAGTaGCAAGTGAATGGACTCCAG +
Preference number: 4 (lower is better)
Translates to: HSATVSGSAPKWNLVSFSAPGSK*QVNGLQ
Trigger: CTGGAGTCCATTCACTTGGCACTTACTGCCTGGGGC...AGAGAAACTTACTAAGTTCCACTTGGGTGCAGAGCCACTCACAGTTGCCGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR GCA 90 bp CACCTGCAAGCAAGCACCAACTTAAATGTATGCCCCAGGTGCCTCATTTGTCTCTGCTCCGCGGAGCTTTaGATAAGCAGCCTGAGAATG +
Preference number: 4 (lower is better)
Translates to: HLQASTNLNVCPRCLICLCSAEL*ISSLRM
Trigger: CATTCTCAGGCTGCTTATGCAAAGCTCCGCGGAGCA...GAGACAAATGAGGCACCTGGGGCATACATTTAAGTTGGTGCTTGCTTGCAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR GCA 90 bp AGTGTTAGAAAGGCGCTTCCTTACCTGTTAGACAAAGGCGACTTCCGGCCAAACTGCTCCGCGGAGCTTTaGATAAGCAGCCTGAGAATG +
Preference number: 4 (lower is better)
Translates to: SVRKALPYLLDKGDFRPNCSAEL*ISSLRM
Trigger: CATTCTCAGGCTGCTTATGCAAAGCTCCGCGGAGCA...GTTTGGCCGGAAGTCGCCTTTGTCTAACAGGTAAGGAAGCGCCTTTCTAACACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR GCA 90 bp GTCCCGAATCCACTGCTACTGTCATGCTATGTAGACAGTTGTGTAGACACATCTTCGGGGCTCAGAAGCTaGTCCGCGGAGCTTTGCATA +
Preference number: 4 (lower is better)
Translates to: VPNPLLLSCYVDSCVDTSSGLRS*SAELCI
Trigger: TATGCAAAGCTCCGCGGAGCAGCTTCTGAGCCCCGA...AGATGTGTCTACACAACTGTCTACATAGCATGACAGTAGCAGTGGATTCGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR GCA 90 bp GGTCCGGATACTGCCCCGAAGGAACTCTGCTGTTGGAATAGTCGCGTTGTTCATAGCATAAGATTCTTTTaGCAGGATGATGGACGGCGG +
Preference number: 4 (lower is better)
Translates to: GPDTAPKELCCWNSRVVHSIRFF*QDDGRR
Trigger: CCGCCGTCCATCATCCTGGCAAAAGAATCTTATGCT...ATGAACAACGCGACTATTCCAACAGCAGAGTTCCTTCGGGGCAGTATCCGGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR GCA 90 bp GGAGGCAGACAATCATGCTGCGGGTTTCTGGGTGGGGACTGGAATTCCAGGCATTTGGCATTTTGGAACTaGATCAAGATGCTTCTGGCT +
Preference number: 4 (lower is better)
Translates to: GGRQSCCGFLGGDWNSRHLAFWN*IKMLLA
Trigger: AGCCAGAAGCATCTTGATGCAGTTCCAAAATGCCAA...ATGCCTGGAATTCCAGTCCCCACCCAGAAACCCGCAGCATGATTGTCTGCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR GCA 90 bp GTAAAGAGTCAAGTAACTGCCCAAGGTGAGGCACTCCTGCAGGAACTCTTCCATCCACGAGGTTCTGCCTaGTCTGAACCAAGAGCAGAA +
Preference number: 4 (lower is better)
Translates to: VKSQVTAQGEALLQELFHPRGSA*SEPRAE
Trigger: TTCTGCTCTTGGTTCAGAGCAGGCAGAACCTCGTGG...ATGGAAGAGTTCCTGCAGGAGTGCCTCACCTTGGGCAGTTACTTGACTCTTTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR GCA 90 bp TCACCTTCATTTGAAAGGAACGAGGACATGAACACTCTTGGCTTGTATGACATGGTTCGCCCTCCACGCTaGTCAGTCCACAGGGCCTTG +
Preference number: 4 (lower is better)
Translates to: SPSFERNEDMNTLGLYDMVRPPR*SVHRAL
Trigger: CAAGGCCCTGTGGACTGAGCAGCGTGGAGGGCGAAC...CATGTCATACAAGCCAAGAGTGTTCATGTCCTCGTTCCTTTCAAATGAAGGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR GCA 90 bp ATGTCTGAACTAGCTCAGTGTCTTTATAGCACGTTCCTAGCCCAGAGTTTCCCATCTGCAACCCACCTGTaGACTGCAGCATGGGGAGTG +
Preference number: 4 (lower is better)
Translates to: MSELAQCLYSTFLAQSFPSATHL*TAAWGV
Trigger: CACTCCCCATGCTGCAGTGCACAGGTGGGTTGCAGA...TGGGAAACTCTGGGCTAGGAACGTGCTATAAAGACACTGAGCTAGTTCAGACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR GCA 90 bp GTCCCGAATCCACTGCTACTGTCATGCTATGTAGACAGTTGTGTAGACACATCTCAGAACTACAGAGCCTaGGGATGGCAGCCTAGGCCT +
Preference number: 4 (lower is better)
Translates to: VPNPLLLSCYVDSCVDTSQNYRA*GWQPRP
Trigger: AGGCCTAGGCTGCCATCCGCAGGCTCTGTAGTTCTG...AGATGTGTCTACACAACTGTCTACATAGCATGACAGTAGCAGTGGATTCGGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR GCA 90 bp ATTAATAGGCAGTGGGACAACATGATTCCGGGATGCAGCCTGCCTCTGCAACCCAATGTATGCCCCAGGTaGCTCATTTGTCTCACCCTA +
Preference number: 4 (lower is better)
Translates to: INRQWDNMIPGCSLPLQPNVCPR*LICLTL
Trigger: TAGGGTGAGACAAATGAGGCACCTGGGGCATACATT...GGGTTGCAGAGGCAGGCTGCATCCCGGAATCATGTTGTCCCACTGCCTATTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CCA 90 bp TCACCTTCATTTGAAAGGAACGAGGACATGAACACTCTTGGCTTGTATGACATGCCCCCACACAGGGTCTaGCCTCTCCCCCTTCCTTTG +
Preference number: 4 (lower is better)
Translates to: SPSFERNEDMNTLGLYDMPPHRV*PLPLPL
Trigger: CAAAGGAAGGGGGAGAGGCCAGACCCTGTGTGGGGG...CATGTCATACAAGCCAAGAGTGTTCATGTCCTCGTTCCTTTCAAATGAAGGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CCA 90 bp GTCCCGAGTGTGCAGGAAGGAGCTTTGGAAACATGTACAGGTGGGTCCCGAATCTCCAGCAATTTCAGCTaGCAACTGGGGATACAGTTT +
Preference number: 4 (lower is better)
Translates to: VPSVQEGALETCTGGSRISSNFS*QLGIQF
Trigger: AAACTGTATCCCCAGTTGCCAGCTGAAATTGCTGGA...GATTCGGGACCCACCTGTACATGTTTCCAAAGCTCCTTCCTGCACACTCGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CCA 90 bp GTCCCGAATCCACTGCTACTGTCATGCTATGTAGACAGTTGTGTAGACACATCTAGGGCCAGGGTCTGGTaGAGGTGCTCAGATTTGGCA +
Preference number: 4 (lower is better)
Translates to: VPNPLLLSCYVDSCVDTSRARVW*RCSDLA
Trigger: TGCCAAATCTGAGCACCTCCACCAGACCCTGGCCCT...AGATGTGTCTACACAACTGTCTACATAGCATGACAGTAGCAGTGGATTCGGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CCA 90 bp GGTCCCGAGTGTGCAGGAAGGAGCTTTGGAAACATGTACAGGTGGGTCCCGAATAACTTCTCAATGCTGTaGCCCACAGCTGTCATAGAT +
Preference number: 4 (lower is better)
Translates to: GPECAGRSFGNMYRWVPNNFSML*PTAVID
Trigger: ATCTATGACAGCTGTGGGCCACAGCATTGAGAAGTT...ATTCGGGACCCACCTGTACATGTTTCCAAAGCTCCTTCCTGCACACTCGGGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CCA 90 bp AGTGTTAGAAAGGCGCTTCCTTACCTGTTAGACAAAGGCGACTTCCGGCCAAACATGGGGAGCTTCAGCTaGGTCTGGGCTTTCTTCAGA +
Preference number: 4 (lower is better)
Translates to: SVRKALPYLLDKGDFRPNMGSFS*VWAFFR
Trigger: TCTGAAGAAAGCCCAGACCCAGCTGAAGCTCCCCAT...GTTTGGCCGGAAGTCGCCTTTGTCTAACAGGTAAGGAAGCGCCTTTCTAACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CCA 90 bp AATGAACTCTGGCATTTTGGGTGCTGTACATGCTTCACAATAATGCATCAGGTGCCAGGGGTGCCAGAGTaGCTCTCTGGCAGCCCTTCA +
Preference number: 4 (lower is better)
Translates to: NELWHFGCCTCFTIMHQVPGVPE*LSGSPS
Trigger: TGAAGGGCTGCCAGAGAGCCACTCTGGCACCCCTGG...CACCTGATGCATTATTGTGAAGCATGTACAGCACCCAAAATGCCAGAGTTCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000592272.5
CDS-3UTR CCA 90 bp AGTGTTAGAAAGGCGCTTCCTTACCTGTTAGACAAAGGCGACTTCCGGCCAAACACAACTGCGGCTCCTTaGCATTTCTTACCGCTGCTG +
Preference number: 4 (lower is better)
Translates to: SVRKALPYLLDKGDFRPNTTAAP*HFLPLL
Trigger: CAGCAGCGGTAAGAAATGCCAAGGAGCCGCAGTTGT...GTTTGGCCGGAAGTCGCCTTTGTCTAACAGGTAAGGAAGCGCCTTTCTAACACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CCA 90 bp TCACCTTCATTTGAAAGGAACGAGGACATGAACACTCTTGGCTTGTATGACATGGAGCATCAGAAGAGCTaGGAAGCACGGCGCCCTCGG +
Preference number: 4 (lower is better)
Translates to: SPSFERNEDMNTLGLYDMEHQKS*EARRPR
Trigger: CCGAGGGCGCCGTGCTTCCCAGCTCTTCTGATGCTC...CATGTCATACAAGCCAAGAGTGTTCATGTCCTCGTTCCTTTCAAATGAAGGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CCA 90 bp GTCCCGAGTGTGCAGGAAGGAGCTTTGGAAACATGTACAGGTGGGTCCCGAATCTTCCGGTACGTGCTATaGAAAGCGTACAGAATGAAC +
Preference number: 4 (lower is better)
Translates to: VPSVQEGALETCTGGSRIFRYVL*KAYRMN
Trigger: GTTCATTCTGTACGCTTTCCATAGCACGTACCGGAA...GATTCGGGACCCACCTGTACATGTTTCCAAAGCTCCTTCCTGCACACTCGGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CCA 90 bp GTCCCGAATCCACTGCTACTGTCATGCTATGTAGACAGTTGTGTAGACACATCTGCCTCCATGAGCATCTaGTCAGGGTGCAGGTCCTTC +
Preference number: 4 (lower is better)
Translates to: VPNPLLLSCYVDSCVDTSASMSI*SGCRSF
Trigger: GAAGGACCTGCACCCTGACCAGATGCTCATGGAGGC...AGATGTGTCTACACAACTGTCTACATAGCATGACAGTAGCAGTGGATTCGGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CCA 90 bp GTCCCGAGTGTGCAGGAAGGAGCTTTGGAAACATGTACAGGTGGGTCCCGAATCATAAGAAACAGCTCTTaGGGCTTCCTCGTTCCACTT +
Preference number: 4 (lower is better)
Translates to: VPSVQEGALETCTGGSRIIRNSS*GFLVPL
Trigger: AAGTGGAACGAGGAAGCCCCAAGAGCTGTTTCTTAT...GATTCGGGACCCACCTGTACATGTTTCCAAAGCTCCTTCCTGCACACTCGGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CCA 90 bp CTGCCCCGAAGGAACTCTGCTGTTGGAATAGTCGCGTTGTTCATCATCATCAGGTTTCTGGGTGGGGACTaGAATTCCAGGCATCAGAGA +
Preference number: 4 (lower is better)
Translates to: LPRRNSAVGIVALFIIIRFLGGD*NSRHQR
Trigger: TCTCTGATGCCTGGAATTCCAGTCCCCACCCAGAAA...CCTGATGATGATGAACAACGCGACTATTCCAACAGCAGAGTTCCTTCGGGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CCA 90 bp GATACTGCCCCGAAGGAACTCTGCTGTTGGAATAGTCGCGTTGTTCATCATCATCATGCTGCGGGTTTCTaGGTGGGGACTGGAATTCCA +
Preference number: 4 (lower is better)
Translates to: DTAPKELCCWNSRVVHHHHAAGF*VGTGIP
Trigger: TGGAATTCCAGTCCCCACCCAGAAACCCGCAGCATG...ATGATGATGAACAACGCGACTATTCCAACAGCAGAGTTCCTTCGGGGCAGTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CCA 90 bp GTAGGAATAGAAAGGCCCGCAGACACTTTTAGGAGCTTCATGATTAATTCAGCAGTAGTCTCAGCCATGTaGCGGACGGACGCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: VGIERPADTFRSFMINSAVVSAM*RTDARL
Trigger: GAGCCTGGCGTCCGTCCGCCACATGGCTGAGACTAC...TGCTGAATTAATCATGAAGCTCCTAAAAGTGTCTGCGGGCCTTTCTATTCCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CCA 90 bp CACCTGCAAGCAAGCACCAACTTAAATGTATGCCCCAGGTGCCTCATTTGTCTCTTCGGCAACTGTGAGTaGCTCTGCACCCAAGTGGAA +
Preference number: 4 (lower is better)
Translates to: HLQASTNLNVCPRCLICLFGNCE*LCTQVE
Trigger: TTCCACTTGGGTGCAGAGCCACTCACAGTTGCCGAA...GAGACAAATGAGGCACCTGGGGCATACATTTAAGTTGGTGCTTGCTTGCAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CCA 90 bp GGTCCCGAGTGTGCAGGAAGGAGCTTTGGAAACATGTACAGGTGGGTCCCGAATGAGAGATGTTTTTCATaGCAACCAGAATCCTGCCTC +
Preference number: 4 (lower is better)
Translates to: GPECAGRSFGNMYRWVPNERCFS*QPESCL
Trigger: GAGGCAGGATTCTGGTTGCCATGAAAAACATCTCTC...ATTCGGGACCCACCTGTACATGTTTCCAAAGCTCCTTCCTGCACACTCGGGACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CCA 90 bp GTCCCGAATCCACTGCTACTGTCATGCTATGTAGACAGTTGTGTAGACACATCTCTGTGCACTGCAGCATaGGGAGTGATGGAGAGGGAG +
Preference number: 4 (lower is better)
Translates to: VPNPLLLSCYVDSCVDTSLCTAA*GVMERE
Trigger: CTCCCTCTCCATCACTCCCCATGCTGCAGTGCACAG...AGATGTGTCTACACAACTGTCTACATAGCATGACAGTAGCAGTGGATTCGGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CCA 90 bp TCACCTTCATTTGAAAGGAACGAGGACATGAACACTCTTGGCTTGTATGACATGTGGACCACCAGGCACTaGACAGGGGCAGAGGAGAGG +
Preference number: 4 (lower is better)
Translates to: SPSFERNEDMNTLGLYDMWTTRH*TGAEER
Trigger: CCTCTCCTCTGCCCCTGTCCAGTGCCTGGTGGTCCA...CATGTCATACAAGCCAAGAGTGTTCATGTCCTCGTTCCTTTCAAATGAAGGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CCA 90 bp AATTTCAGTAGATCTCCCGACCTGACCCAGTTTCCACAGACAAGTGTTTCAGCACCACTTGGACCACACTaGTGCGACTCTAACCCCAGG +
Preference number: 4 (lower is better)
Translates to: NFSRSPDLTQFPQTSVSAPLGPH*CDSNPR
Trigger: CCTGGGGTTAGAGTCGCACCAGTGTGGTCCAAGTGG...TGCTGAAACACTTGTCTGTGGAAACTGGGTCAGGTCGGGAGATCTACTGAAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CCA 90 bp GTCCCGAGTGTGCAGGAAGGAGCTTTGGAAACATGTACAGGTGGGTCCCGAATCAATGAGCTGTACAGTTaGCCCAAAATGAAGAGCAGG +
Preference number: 4 (lower is better)
Translates to: VPSVQEGALETCTGGSRINELYS*PKMKSR
Trigger: CCTGCTCTTCATTTTGGGCCAACTGTACAGCTCATT...GATTCGGGACCCACCTGTACATGTTTCCAAAGCTCCTTCCTGCACACTCGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR TCA 90 bp GTCCCGAGTGTGCAGGAAGGAGCTTTGGAAACATGTACAGGTGGGTCCCGAATCAACATTTTCCAGCCATaGACCAGGCTCCAAGATTTT +
Preference number: 4 (lower is better)
Translates to: VPSVQEGALETCTGGSRINIFQP*TRLQDF
Trigger: AAAATCTTGGAGCCTGGTTCATGGCTGGAAAATGTT...GATTCGGGACCCACCTGTACATGTTTCCAAAGCTCCTTCCTGCACACTCGGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR TCA 90 bp GTCCCGAGTGTGCAGGAAGGAGCTTTGGAAACATGTACAGGTGGGTCCCGAATCAGATCTCAGAACAGCTaGACTACTGAGCAATGCATA +
Preference number: 4 (lower is better)
Translates to: VPSVQEGALETCTGGSRIRSQNS*TTEQCI
Trigger: TATGCATTGCTCAGTAGTTCAGCTGTTCTGAGATCT...GATTCGGGACCCACCTGTACATGTTTCCAAAGCTCCTTCCTGCACACTCGGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR TCA 90 bp CATTCGGCAACTGTGAGTGGCTCTGCACCCAAGTGGAACTTAGTAAGTTTCTCTGCTCGGCCTTGCTGGTaGATTGCTGAAGATCTCAGA +
Preference number: 4 (lower is better)
Translates to: HSATVSGSAPKWNLVSFSARPCW*IAEDLR
Trigger: TCTGAGATCTTCAGCAATTCACCAGCAAGGCCGAGC...AGAGAAACTTACTAAGTTCCACTTGGGTGCAGAGCCACTCACAGTTGCCGAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR TCA 90 bp AATTTCAGTAGATCTCCCGACCTGACCCAGTTTCCACAGACAAGTGTTTCAGCACTGTTGGGCCAATCCTaGGCCTTGGTTATGGCTCAC +
Preference number: 4 (lower is better)
Translates to: NFSRSPDLTQFPQTSVSALLGQS*ALVMAH
Trigger: GTGAGCCATAACCAAGGCTCAGGATTGGCCCAACAG...TGCTGAAACACTTGTCTGTGGAAACTGGGTCAGGTCGGGAGATCTACTGAAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR TCA 90 bp CATTCGGCAACTGTGAGTGGCTCTGCACCCAAGTGGAACTTAGTAAGTTTCTCTCCACAAAGGAAGGAGTaGTGTTGCCTGCCACAATCC +
Preference number: 4 (lower is better)
Translates to: HSATVSGSAPKWNLVSFSPQRKE*CCLPQS
Trigger: GGATTGTGGCAGGCAACATCACTCCTTCCTTTGTGG...AGAGAAACTTACTAAGTTCCACTTGGGTGCAGAGCCACTCACAGTTGCCGAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR TCA 90 bp AATGACAGATTCTGTCAGGACGGAGTCATTCTGCTCTGTCTGAATGAGGGAGAGCCACAAAGGAAGGAGTaGTGTTGCCTGCCACAATCC +
Preference number: 4 (lower is better)
Translates to: NDRFCQDGVILLCLNEGEPQRKE*CCLPQS
Trigger: GGATTGTGGCAGGCAACATCACTCCTTCCTTTGTGG...CTCTCCCTCATTCAGACAGAGCAGAATGACTCCGTCCTGACAGAATCTGTCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR TCA 90 bp TTCTGGCTGTCAGTAGGAATAGAAAGGCCCGCAGACACTTTTAGGAGCTTCATGTGTGGTCCCGGACGGTaGAGATACAGAAGGAAGAAC +
Preference number: 4 (lower is better)
Translates to: FWLSVGIERPADTFRSFMCGPGR*RYRRKN
Trigger: GTTCTTCCTTCTGTATCTTCACCGTCCGGGACCACA...CATGAAGCTCCTAAAAGTGTCTGCGGGCCTTTCTATTCCTACTGACAGCCAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR TCA 90 bp AATAGTCGCGTTGTTCATCATCATCAGGACTTCCATAAAGAGGCTGCTGAGGGCTGTGGTCCCGGACGGTaGAGATACAGAAGGAAGAAC +
Preference number: 4 (lower is better)
Translates to: NSRVVHHHQDFHKEAAEGCGPGR*RYRRKN
Trigger: GTTCTTCCTTCTGTATCTTCACCGTCCGGGACCACA...GCCCTCAGCAGCCTCTTTATGGAAGTCCTGATGATGATGAACAACGCGACTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR TCA 90 bp GACTTCCGGCCAAACCCAATTGCCCCCAGGATCCCAGAGCTGAGTCTCTCCTCAATAATATATATACATTaGAGAGCCTCACCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: DFRPNPIAPRIPELSLSSIIYIH*RASPAP
Trigger: AGGAGCTGGTGAGGCTCTTCAATGTATATATATTAT...TGAGGAGAGACTCAGCTCTGGGATCCTGGGGGCAATTGGGTTTGGCCGGAAGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR TCA 90 bp GTCCCGAATCCACTGCTACTGTCATGCTATGTAGACAGTTGTGTAGACACATCTCCAGCAAAGGATCAGTaGAGTCCAGCTGCACGGACA +
Preference number: 4 (lower is better)
Translates to: VPNPLLLSCYVDSCVDTSPAKDQ*SPAART
Trigger: TGTCCGTGCAGCTGGACTTCACTGATCCTTTGCTGG...AGATGTGTCTACACAACTGTCTACATAGCATGACAGTAGCAGTGGATTCGGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR TCA 90 bp ACAGATCCCTCTGAGACGGACATTTTGTGGCCTGTAAAACTCAAGAGACTAAACTCCAGAGCAACCTGCTaGGATTCCCGAAGAGCTGCG +
Preference number: 4 (lower is better)
Translates to: TDPSETDILWPVKLKRLNSRATC*DSRRAA
Trigger: CGCAGCTCTTCGGGAATCTCAGCAGGTTGCTCTGGA...GTTTAGTCTCTTGAGTTTTACAGGCCACAAAATGTCCGTCTCAGAGGGATCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR TCA 90 bp AATTTCAGTAGATCTCCCGACCTGACCCAGTTTCCACAGACAAGTGTTTCAGCACTTCAAACTGAACCGTaGCAACTGCGGCTCCTTGGC +
Preference number: 4 (lower is better)
Translates to: NFSRSPDLTQFPQTSVSALQTEP*QLRLLG
Trigger: GCCAAGGAGCCGCAGTTGTCACGGTTCAGTTTGAAG...TGCTGAAACACTTGTCTGTGGAAACTGGGTCAGGTCGGGAGATCTACTGAAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR TCA 90 bp GTCAGGGTGCAGGTCCTTCCATGGCAGTTTCCGGTACGTGCTATGGAAAGCGTACATTCACTAAGGCCGTaGTCAAGTTTTCTGCATGTA +
Preference number: 4 (lower is better)
Translates to: VRVQVLPWQFPVRAMESVHSLRP*SSFLHV
Trigger: TACATGCAGAAAACTTGATCACGGCCTTAGTGAATG...TACGCTTTCCATAGCACGTACCGGAAACTGCCATGGAAGGACCTGCACCCTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000592272.5
CDS-3UTR TCA 90 bp TCGACAGGGGCAAGTGATGTGAATGAGGCTAGGGTCAGGGCCCGAGGGAATGCAACTTGGTTAGCAGCATaGAAATCATATCACTGTTGT +
Preference number: 4 (lower is better)
Translates to: STGASDVNEARVRARGNATWLAA*KSYHCC
Trigger: ACAACAGTGATATGATTTTCATGCTGCTAACCAAGT...TGCATTCCCTCGGGCCCTGACCCTAGCCTCATTCACATCACTTGCCCCTGTCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR TCA 90 bp CATTCGGCAACTGTGAGTGGCTCTGCACCCAAGTGGAACTTAGTAAGTTTCTCTGCAGTAAGTGCCAAGTaGATGGACTCCAGAAGCCTG +
Preference number: 4 (lower is better)
Translates to: HSATVSGSAPKWNLVSFSAVSAK*MDSRSL
Trigger: CAGGCTTCTGGAGTCCATTCACTTGGCACTTACTGC...AGAGAAACTTACTAAGTTCCACTTGGGTGCAGAGCCACTCACAGTTGCCGAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR TCA 90 bp CATTCGGCAACTGTGAGTGGCTCTGCACCCAAGTGGAACTTAGTAAGTTTCTCTCAGCTGCACAATGCTTaGGGCCACCACAGTATCACT +
Preference number: 4 (lower is better)
Translates to: HSATVSGSAPKWNLVSFSQLHNA*GHHSIT
Trigger: AGTGATACTGTGGTGGCCTCAAGCATTGTGCAGCTG...AGAGAAACTTACTAAGTTCCACTTGGGTGCAGAGCCACTCACAGTTGCCGAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR TCA 90 bp CATTCGGCAACTGTGAGTGGCTCTGCACCCAAGTGGAACTTAGTAAGTTTCTCTATTCTTTTGCCAGGATaGTGGACGGCGGGTAATGGC +
Preference number: 4 (lower is better)
Translates to: HSATVSGSAPKWNLVSFSILLPG*WTAGNG
Trigger: GCCATTACCCGCCGTCCATCATCCTGGCAAAAGAAT...AGAGAAACTTACTAAGTTCCACTTGGGTGCAGAGCCACTCACAGTTGCCGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR TCA 90 bp ATTAATAGGCAGTGGGACAACATGATTCCGGGATGCAGCCTGCCTCTGCAACCCTTTGTTCCAGGGTGCTaGGGAATTGAACCATCTGAT +
Preference number: 4 (lower is better)
Translates to: INRQWDNMIPGCSLPLQPFVPGC*GIEPSD
Trigger: ATCAGATGGTTCAATTCCTCAGCACCCTGGAACAAA...GGGTTGCAGAGGCAGGCTGCATCCCGGAATCATGTTGTCCCACTGCCTATTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR TCA 90 bp TTAGACAAAGGCGACTTCCGGCCAAACCCAATTGCCCCCAGGATCCCAGAGCTGCTAGGACTGCTAAGGTaGTTTTTCCATTTTGTTCCA +
Preference number: 4 (lower is better)
Translates to: LDKGDFRPNPIAPRIPELLGLLR*FFHFVP
Trigger: TGGAACAAAATGGAAAAATCACCTTAGCAGTCCTAG...CAGCTCTGGGATCCTGGGGGCAATTGGGTTTGGCCGGAAGTCGCCTTTGTCTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR TCA 90 bp ACCACAAAAACAGCTTTGCCTCTTCCTCCACGGAGCTTGGGTACACCTGTTCCACCCCATCCTGAATTCTaGTTGAGAGGGCTTTCTTTG +
Preference number: 4 (lower is better)
Translates to: TTKTALPLPPRSLGTPVPPHPEF*LRGLSL
Trigger: CAAAGAAAGCCCTCTCAATCAGAATTCAGGATGGGG...TGGAACAGGTGTACCCAAGCTCCGTGGAGGAAGAGGCAAAGCTGTTTTTGTGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR TCA 90 bp GCCCCGAAGGAACTCTGCTGTTGGAATAGTCGCGTTGTTCATCATCATCAGGACCCCCATCCTGAATTCTaGTTGAGAGGGCTTTCTTTG +
Preference number: 4 (lower is better)
Translates to: APKELCCWNSRVVHHHQDPHPEF*LRGLSL
Trigger: CAAAGAAAGCCCTCTCAATCAGAATTCAGGATGGGG...GTCCTGATGATGATGAACAACGCGACTATTCCAACAGCAGAGTTCCTTCGGGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR TCA 90 bp TGCTTCTGGCTGTCAGTAGGAATAGAAAGGCCCGCAGACACTTTTAGGAGCTTCTCTGCTCTGTCTGAATaGGGGAGAGCTGAAGGACTT +
Preference number: 4 (lower is better)
Translates to: CFWLSVGIERPADTFRSFSALSE*GRAEGL
Trigger: AAGTCCTTCAGCTCTCCCTCATTCAGACAGAGCAGA...GAAGCTCCTAAAAGTGTCTGCGGGCCTTTCTATTCCTACTGACAGCCAGAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR TCA 90 bp CACCTGCAAGCAAGCACCAACTTAAATGTATGCCCCAGGTGCCTCATTTGTCTCTCTTCCATAGGAACCTaGACTGAAAGGAAGGCAGCC +
Preference number: 4 (lower is better)
Translates to: HLQASTNLNVCPRCLICLSSIGT*TERKAA
Trigger: GGCTGCCTTCCTTTCAGTTCAGGTTCCTATGGAAGA...GAGACAAATGAGGCACCTGGGGCATACATTTAAGTTGGTGCTTGCTTGCAGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR TCA 90 bp GTCCCGAGTGTGCAGGAAGGAGCTTTGGAAACATGTACAGGTGGGTCCCGAATCGCTCTACAGTGCAATTaGGCAAAGTTACTTGTGCAA +
Preference number: 4 (lower is better)
Translates to: VPSVQEGALETCTGGSRIALQCN*AKLLVQ
Trigger: TTGCACAAGTAACTTTGCTCAATTGCACTGTAGAGC...GATTCGGGACCCACCTGTACATGTTTCCAAAGCTCCTTCCTGCACACTCGGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR TCA 90 bp CATTCGGCAACTGTGAGTGGCTCTGCACCCAAGTGGAACTTAGTAAGTTTCTCTGGAGGTCTTGTGAGATaGCTGGGACATTCGGCAACT +
Preference number: 4 (lower is better)
Translates to: HSATVSGSAPKWNLVSFSGGLVR*LGHSAT
Trigger: AGTTGCCGAATGTCCCAGTCATCTCACAAGACCTCC...AGAGAAACTTACTAAGTTCCACTTGGGTGCAGAGCCACTCACAGTTGCCGAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR TCA 90 bp GTCCCGAATCCACTGCTACTGTCATGCTATGTAGACAGTTGTGTAGACACATCTGCCAGCTTGCCATCCTaGTTCAGACAGGCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: VPNPLLLSCYVDSCVDTSASLPS*FRQAAS
Trigger: AGAAGCTGCCTGTCTGAATCAGGATGGCAAGCTGGC...AGATGTGTCTACACAACTGTCTACATAGCATGACAGTAGCAGTGGATTCGGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR TCA 90 bp TCACCTTCATTTGAAAGGAACGAGGACATGAACACTCTTGGCTTGTATGACATGGGCAGTGGGACAACATaGTTCCGGGATGCAGCCTGC +
Preference number: 4 (lower is better)
Translates to: SPSFERNEDMNTLGLYDMGSGTT*FRDAAC
Trigger: GCAGGCTGCATCCCGGAATCATGTTGTCCCACTGCC...CATGTCATACAAGCCAAGAGTGTTCATGTCCTCGTTCCTTTCAAATGAAGGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR TCA 90 bp GGTCCCGAGTGTGCAGGAAGGAGCTTTGGAAACATGTACAGGTGGGTCCCGAATCAACTGATATTAAGCTaGGGTCTGCAGTCTCAACTT +
Preference number: 4 (lower is better)
Translates to: GPECAGRSFGNMYRWVPNQLILS*GLQSQL
Trigger: AAGTTGAGACTGCAGACCTCAGCTTAATATCAGTTG...ATTCGGGACCCACCTGTACATGTTTCCAAAGCTCCTTCCTGCACACTCGGGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR TCA 90 bp ATTAATAGGCAGTGGGACAACATGATTCCGGGATGCAGCCTGCCTCTGCAACCCGCTACTATCTCAAAATaGGCTGTACAGTTGGCCCAA +
Preference number: 4 (lower is better)
Translates to: INRQWDNMIPGCSLPLQPATISK*AVQLAQ
Trigger: TTGGGCCAACTGTACAGCTCATTTTGAGATAGTAGC...GGGTTGCAGAGGCAGGCTGCATCCCGGAATCATGTTGTCCCACTGCCTATTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR TCA 90 bp GTCCCGAGTGTGCAGGAAGGAGCTTTGGAAACATGTACAGGTGGGTCCCGAATCTCTATCAGTGCTCAATaGGAGACAGTACATCTGTAC +
Preference number: 4 (lower is better)
Translates to: VPSVQEGALETCTGGSRISISAQ*ETVHLY
Trigger: GTACAGATGTACTGTCTCTCATTGAGCACTGATAGA...GATTCGGGACCCACCTGTACATGTTTCCAAAGCTCCTTCCTGCACACTCGGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR GCA 90 bp AGACAATCATGCTGCGGGTTTCTGGGTGGGGACTGGAATTCCAGGCATCAGAGACTTCATTGGGCTGAGTaGTTACAGATATGTGTGCCT +
Preference number: 4 (lower is better)
Translates to: RQSCCGFLGGDWNSRHQRLHWAE*LQICVP
Trigger: AGGCACACATATCTGTAAGCACTCAGCCCAATGAAG...TCTCTGATGCCTGGAATTCCAGTCCCCACCCAGAAACCCGCAGCATGATTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR GCA 90 bp ACCACAAAAACAGCTTTGCCTCTTCCTCCACGGAGCTTGGGTACACCTGTTCCAAGGAGTGATGTTGCCTaGCACAATCCAGCTTACCAA +
Preference number: 4 (lower is better)
Translates to: TTKTALPLPPRSLGTPVPRSDVA*HNPAYQ
Trigger: TTGGTAAGCTGGATTGTGGCAGGCAACATCACTCCT...TGGAACAGGTGTACCCAAGCTCCGTGGAGGAAGAGGCAAAGCTGTTTTTGTGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR GCA 90 bp TCGGGCGGGTTAAAGACAATGATATCGTCTAAGAGCTTAGACATTTCCTGTTCTCTGGCAGCCCTTCACTaGCCTCTGCTGGAACACGGA +
Preference number: 4 (lower is better)
Translates to: SGGLKTMISSKSLDISCSLAALH*PLLEHG
Trigger: TCCGTGTTCCAGCAGAGGGCAGTGAAGGGCTGCCAG...AGAACAGGAAATGTCTAAGCTCTTAGACGATATCATTGTCTTTAACCCGCCCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR GCA 90 bp GTAGGAATAGAAAGGCCCGCAGACACTTTTAGGAGCTTCATGATTAATTCAGCACTGGCAGCCCTTCACTaGCCTCTGCTGGAACACGGA +
Preference number: 4 (lower is better)
Translates to: VGIERPADTFRSFMINSALAALH*PLLEHG
Trigger: TCCGTGTTCCAGCAGAGGGCAGTGAAGGGCTGCCAG...TGCTGAATTAATCATGAAGCTCCTAAAAGTGTCTGCGGGCCTTTCTATTCCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR GCA 90 bp ACAGATCCCTCTGAGACGGACATTTTGTGGCCTGTAAAACTCAAGAGACTAAACTCAGGTAACCAGGGGTaGCAGAGTGGCTCTCTGGCA +
Preference number: 4 (lower is better)
Translates to: TDPSETDILWPVKLKRLNSGNQG*QSGSLA
Trigger: TGCCAGAGAGCCACTCTGGCACCCCTGGTTACCTGA...GTTTAGTCTCTTGAGTTTTACAGGCCACAAAATGTCCGTCTCAGAGGGATCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR GCA 90 bp AATAGTCGCGTTGTTCATCATCATCAGGACTTCCATAAAGAGGCTGCTGAGGGCCTCACCAGCTCCTTGTaGAGTTCTGGTGAAGTCAGG +
Preference number: 4 (lower is better)
Translates to: NSRVVHHHQDFHKEAAEGLTSSL*SSGEVR
Trigger: CCTGACTTCACCAGAACTGCACAAGGAGCTGGTGAG...GCCCTCAGCAGCCTCTTTATGGAAGTCCTGATGATGATGAACAACGCGACTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR GCA 90 bp GTGCTGTACATGCTTCACAATAATGCATCAGGTGCAACCAAAGGGCTCCTGCATTCAGTGAAGTCCAGCTaGACGGACAAACTGCAGGGT +
Preference number: 4 (lower is better)
Translates to: VLYMLHNNASGATKGLLHSVKSS*TDKLQG
Trigger: ACCCTGCAGTTTGTCCGTGCAGCTGGACTTCACTGA...ATGCAGGAGCCCTTTGGTTGCACCTGATGCATTATTGTGAAGCATGTACAGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000592272.5
CDS-3UTR GCA 90 bp AGTGTTAGAAAGGCGCTTCCTTACCTGTTAGACAAAGGCGACTTCCGGCCAAACGGCTGGGGAGCCTCATaGTTCCGCAAGTTACTTAAA +
Preference number: 4 (lower is better)
Translates to: SVRKALPYLLDKGDFRPNGWGAS*FRKLLK
Trigger: TTTAAGTAACTTGCGGAAGCATGAGGCTCCCCAGCC...GTTTGGCCGGAAGTCGCCTTTGTCTAACAGGTAAGGAAGCGCCTTTCTAACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR GCA 90 bp GTCCCGAATCCACTGCTACTGTCATGCTATGTAGACAGTTGTGTAGACACATCTACAGATTCAGGTCTGTaGACACCAGCTGGGTGGCGT +
Preference number: 4 (lower is better)
Translates to: VPNPLLLSCYVDSCVDTSTDSGL*TPAGWR
Trigger: ACGCCACCCAGCTGGTGTGCACAGACCTGAATCTGT...AGATGTGTCTACACAACTGTCTACATAGCATGACAGTAGCAGTGGATTCGGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR GCA 90 bp AGCCACGAGGTTCTGCCTGCTCTGAACCAAGAGCAGAATTCGAATGACAGATTCGTTCTGGCCTGCTGTTaGAACAGATTCAGGTCTGTG +
Preference number: 4 (lower is better)
Translates to: SHEVLPALNQEQNSNDRFVLACC*NRFRSV
Trigger: CACAGACCTGAATCTGTTGCAACAGCAGGCCAGAAC...GAATCTGTCATTCGAATTCTGCTCTTGGTTCAGAGCAGGCAGAACCTCGTGGCT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR GCA 90 bp ATTAATAGGCAGTGGGACAACATGATTCCGGGATGCAGCCTGCCTCTGCAACCCATTTCTTACCGCTGCTaGCTCTGCACTCCAAATGTA +
Preference number: 4 (lower is better)
Translates to: INRQWDNMIPGCSLPLQPISYRC*LCTPNV
Trigger: TACATTTGGAGTGCAGAGGCAGCAGCGGTAAGAAAT...GGGTTGCAGAGGCAGGCTGCATCCCGGAATCATGTTGTCCCACTGCCTATTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR GCA 90 bp GTAAAGAGTCAAGTAACTGCCCAAGGTGAGGCACTCCTGCAGGAACTCTTCCATGGCATTTCTTACCGCTaGTGCCTCTGCACTCCAAAT +
Preference number: 4 (lower is better)
Translates to: VKSQVTAQGEALLQELFHGISYR*CLCTPN
Trigger: ATTTGGAGTGCAGAGGCAGCAGCGGTAAGAAATGCC...ATGGAAGAGTTCCTGCAGGAGTGCCTCACCTTGGGCAGTTACTTGACTCTTTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR GCA 90 bp ATTAATAGGCAGTGGGACAACATGATTCCGGGATGCAGCCTGCCTCTGCAACCCTGGTTTAGCAGCTTCTaGTTGCAACTGCTTCACTTC +
Preference number: 4 (lower is better)
Translates to: INRQWDNMIPGCSLPLQPWFSSF*LQLLHF
Trigger: GAAGTGAAGCAGTTGCAAGCAGAAGCTGCTAAACCA...GGGTTGCAGAGGCAGGCTGCATCCCGGAATCATGTTGTCCCACTGCCTATTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR GCA 90 bp TCTTCCTCCACGGAGCTTGGGTACACCTGTTCCAGCCACTTGCTTAAGATGAGCCGTGATCAAGTTTTCTaGATGTACAGCAGCTTCCAC +
Preference number: 4 (lower is better)
Translates to: SSSTELGYTCSSHLLKMSRDQVF*MYSSFH
Trigger: GTGGAAGCTGCTGTACATGCAGAAAACTTGATCACG...GCTCATCTTAAGCAAGTGGCTGGAACAGGTGTACCCAAGCTCCGTGGAGGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR GCA 90 bp GTAAAGAGTCAAGTAACTGCCCAAGGTGAGGCACTCCTGCAGGAACTCTTCCATGCAGGGAGCAGAGCCTaGTGTTCTTCAGAATGGTTT +
Preference number: 4 (lower is better)
Translates to: VKSQVTAQGEALLQELFHAGSRA*CSSEWF
Trigger: AAACCATTCTGAAGAACAGCAGGCTCTGCTCCCTGC...ATGGAAGAGTTCCTGCAGGAGTGCCTCACCTTGGGCAGTTACTTGACTCTTTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR GCA 90 bp TGCTTCTGGCTGTCAGTAGGAATAGAAAGGCCCGCAGACACTTTTAGGAGCTTCGCAGGGAGCAGAGCCTaGTGTTCTTCAGAATGGTTT +
Preference number: 4 (lower is better)
Translates to: CFWLSVGIERPADTFRSFAGSRA*CSSEWF
Trigger: AAACCATTCTGAAGAACAGCAGGCTCTGCTCCCTGC...GAAGCTCCTAAAAGTGTCTGCGGGCCTTTCTATTCCTACTGACAGCCAGAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR GCA 90 bp CACCTGCAAGCAAGCACCAACTTAAATGTATGCCCCAGGTGCCTCATTTGTCTCCAGCTGTATGAACTCTaGAGGTGCAGCATTGGGAGT +
Preference number: 4 (lower is better)
Translates to: HLQASTNLNVCPRCLICLQLYEL*RCSIGS
Trigger: ACTCCCAATGCTGCACCTGCAGAGTTCATACAGCTG...GAGACAAATGAGGCACCTGGGGCATACATTTAAGTTGGTGCTTGCTTGCAGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR GCA 90 bp CATTCGGCAACTGTGAGTGGCTCTGCACCCAAGTGGAACTTAGTAAGTTTCTCTCAACCAAAGGGCTCCTaGATCACCTGGCAACAGCTT +
Preference number: 4 (lower is better)
Translates to: HSATVSGSAPKWNLVSFSQPKGS*ITWQQL
Trigger: AAGCTGTTGCCAGGTGATGCAGGAGCCCTTTGGTTG...AGAGAAACTTACTAAGTTCCACTTGGGTGCAGAGCCACTCACAGTTGCCGAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR GCA 90 bp ATGTCTGAACTAGCTCAGTGTCTTTATAGCACGTTCCTAGCCCAGAGTTTCCCAAGCATCTGGTCAGGGTaGAGGTCCTTCCATGGCAGT +
Preference number: 4 (lower is better)
Translates to: MSELAQCLYSTFLAQSFPSIWSG*RSFHGS
Trigger: ACTGCCATGGAAGGACCTGCACCCTGACCAGATGCT...TGGGAAACTCTGGGCTAGGAACGTGCTATAAAGACACTGAGCTAGTTCAGACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR GCA 90 bp CATTCGGCAACTGTGAGTGGCTCTGCACCCAAGTGGAACTTAGTAAGTTTCTCTGCCCCGAAGGAACTCTaGTGTTGGAATAGTCGCGTT +
Preference number: 4 (lower is better)
Translates to: HSATVSGSAPKWNLVSFSAPKEL*CWNSRV
Trigger: AACGCGACTATTCCAACAGCAGAGTTCCTTCGGGGC...AGAGAAACTTACTAAGTTCCACTTGGGTGCAGAGCCACTCACAGTTGCCGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR GCA 90 bp GATACTGCCCCGAAGGAACTCTGCTGTTGGAATAGTCGCGTTGTTCATCATCATGCCCCGAAGGAACTCTaGTGTTGGAATAGTCGCGTT +
Preference number: 4 (lower is better)
Translates to: DTAPKELCCWNSRVVHHHAPKEL*CWNSRV
Trigger: AACGCGACTATTCCAACAGCAGAGTTCCTTCGGGGC...ATGATGATGAACAACGCGACTATTCCAACAGCAGAGTTCCTTCGGGGCAGTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR GCA 90 bp TCGACAGGGGCAAGTGATGTGAATGAGGCTAGGGTCAGGGCCCGAGGGAATGCATGGTATTCAACATACTaGTTACTTGATGCCATGGAT +
Preference number: 4 (lower is better)
Translates to: STGASDVNEARVRARGNAWYSTY*LLDAMD
Trigger: ATCCATGGCATCAAGTAAGCAGTATGTTGAATACCA...TGCATTCCCTCGGGCCCTGACCCTAGCCTCATTCACATCACTTGCCCCTGTCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR GCA 90 bp ACAGATCCCTCTGAGACGGACATTTTGTGGCCTGTAAAACTCAAGAGACTAAACAGAGGCAGCCCTGTCTaGACTCCTCACCAAGTGGAC +
Preference number: 4 (lower is better)
Translates to: TDPSETDILWPVKLKRLNRGSPV*TPHQVD
Trigger: GTCCACTTGGTGAGGAGTGCAGACAGGGCTGCCTCT...GTTTAGTCTCTTGAGTTTTACAGGCCACAAAATGTCCGTCTCAGAGGGATCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR GCA 90 bp GTCCCGAATCCACTGCTACTGTCATGCTATGTAGACAGTTGTGTAGACACATCTGAAACCACAGCCCCGTaGTCTCTGGAGGCCAACAAT +
Preference number: 4 (lower is better)
Translates to: VPNPLLLSCYVDSCVDTSETTAP*SLEANN
Trigger: ATTGTTGGCCTCCAGAGAGCACGGGGCTGTGGTTTC...AGATGTGTCTACACAACTGTCTACATAGCATGACAGTAGCAGTGGATTCGGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR GCA 90 bp ATGTCTGAACTAGCTCAGTGTCTTTATAGCACGTTCCTAGCCCAGAGTTTCCCAAACATGATTCCGGGATaGAGCCTGCCTCTGCAACCC +
Preference number: 4 (lower is better)
Translates to: MSELAQCLYSTFLAQSFPNMIPG*SLPLQP
Trigger: GGGTTGCAGAGGCAGGCTGCATCCCGGAATCATGTT...TGGGAAACTCTGGGCTAGGAACGTGCTATAAAGACACTGAGCTAGTTCAGACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR GCA 90 bp GTCCCGAGTGTGCAGGAAGGAGCTTTGGAAACATGTACAGGTGGGTCCCGAATCACCAACTTAAATGTATaGCCCAGGTGCCTCATTTGT +
Preference number: 4 (lower is better)
Translates to: VPSVQEGALETCTGGSRITNLNV*PRCLIC
Trigger: ACAAATGAGGCACCTGGGGCATACATTTAAGTTGGT...GATTCGGGACCCACCTGTACATGTTTCCAAAGCTCCTTCCTGCACACTCGGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR GCA 90 bp GTCCCGAATCCACTGCTACTGTCATGCTATGTAGACAGTTGTGTAGACACATCTCTGATGCCCGAGGCATaGTGTGGAAACCGGACCAAA +
Preference number: 4 (lower is better)
Translates to: VPNPLLLSCYVDSCVDTSLMPEA*CGNRTK
Trigger: TTTGGTCCGGTTTCCACAGCATGCCTCGGGCATCAG...AGATGTGTCTACACAACTGTCTACATAGCATGACAGTAGCAGTGGATTCGGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR GCA 90 bp GGTCCGGATACTGCCCCGAAGGAACTCTGCTGTTGGAATAGTCGCGTTGTTCATCAATACTCAAAAGACTaGAGCCCTGCTGATTCTGCA +
Preference number: 4 (lower is better)
Translates to: GPDTAPKELCCWNSRVVHQYSKD*SPADSA
Trigger: TGCAGAATCAGCAGGGCTGCAGTCTTTTGAGTATTG...ATGAACAACGCGACTATTCCAACAGCAGAGTTCCTTCGGGGCAGTATCCGGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587884.1
CDS-3UTR CCA 90 bp GTCCCGAGTGTGCAGGAAGGAGCTTTGGAAACATGTACAGGTGGGTCCCGAATCATTTCAGCTGGCAACTaGGGATACAGTTTCTTCACT +
Preference number: 4 (lower is better)
Translates to: VPSVQEGALETCTGGSRIISAGN*GYSFFT
Trigger: AGTGAAGAAACTGTATCCCCAGTTGCCAGCTGAAAT...GATTCGGGACCCACCTGTACATGTTTCCAAAGCTCCTTCCTGCACACTCGGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CCA 90 bp TCGACAGGGGCAAGTGATGTGAATGAGGCTAGGGTCAGGGCCCGAGGGAATGCAGTTCCACTAGTGAGTTaGCAAAGGCAAAAATTTTCA +
Preference number: 4 (lower is better)
Translates to: STGASDVNEARVRARGNAVPLVS*QRQKFS
Trigger: TGAAAATTTTTGCCTTTGCCAACTCACTAGTGGAAC...TGCATTCCCTCGGGCCCTGACCCTAGCCTCATTCACATCACTTGCCCCTGTCGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CCA 90 bp GTAGGAATAGAAAGGCCCGCAGACACTTTTAGGAGCTTCATGATTAATTCAGCACAAACCAGACCTGAGTaGGCGTGGCCAAGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: VGIERPADTFRSFMINSAQTRPE*AWPSPP
Trigger: TGGAGGGCTTGGCCACGCCCACTCAGGTCTGGTTTG...TGCTGAATTAATCATGAAGCTCCTAAAAGTGTCTGCGGGCCTTTCTATTCCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CCA 90 bp AATAGTCGCGTTGTTCATCATCATCAGGACTTCCATAAAGAGGCTGCTGAGGGCATGGGGAGCTTCAGCTaGGTCTGGGCTTTCTTCAGA +
Preference number: 4 (lower is better)
Translates to: NSRVVHHHQDFHKEAAEGMGSFS*VWAFFR
Trigger: TCTGAAGAAAGCCCAGACCCAGCTGAAGCTCCCCAT...GCCCTCAGCAGCCTCTTTATGGAAGTCCTGATGATGATGAACAACGCGACTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CCA 90 bp TCACCTTCATTTGAAAGGAACGAGGACATGAACACTCTTGGCTTGTATGACATGCAGCCTCTGGAGGGATaGCACGATGGGGAGCTTCAG +
Preference number: 4 (lower is better)
Translates to: SPSFERNEDMNTLGLYDMQPLEG*HDGELQ
Trigger: CTGAAGCTCCCCATCGTGCCATCCCTCCAGAGGCTG...CATGTCATACAAGCCAAGAGTGTTCATGTCCTCGTTCCTTTCAAATGAAGGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CCA 90 bp GTCCCGAATCCACTGCTACTGTCATGCTATGTAGACAGTTGTGTAGACACATCTTTGCTTGCAGCATGGTaGAAGTCAGCCACCTCGGTC +
Preference number: 4 (lower is better)
Translates to: VPNPLLLSCYVDSCVDTSLLAAW*KSATSV
Trigger: GACCGAGGTGGCTGACTTCCACCATGCTGCAAGCAA...AGATGTGTCTACACAACTGTCTACATAGCATGACAGTAGCAGTGGATTCGGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CCA 90 bp GCTGTTGGAATAGTCGCGTTGTTCATCATCATCAGGACTTCCATAAAGAGGCTGTTGCTTGCAGCATGGTaGAAGTCAGCCACCTCGGTC +
Preference number: 4 (lower is better)
Translates to: AVGIVALFIIIRTSIKRLLLAAW*KSATSV
Trigger: GACCGAGGTGGCTGACTTCCACCATGCTGCAAGCAA...CAGCCTCTTTATGGAAGTCCTGATGATGATGAACAACGCGACTATTCCAACAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CCA 90 bp GTAAAGAGTCAAGTAACTGCCCAAGGTGAGGCACTCCTGCAGGAACTCTTCCATACAAACTGCAGGGTGTaGAATGGGACTCAAGCTTGG +
Preference number: 4 (lower is better)
Translates to: VKSQVTAQGEALLQELFHTNCRV*NGTQAW
Trigger: CCAAGCTTGAGTCCCATTCCACACCCTGCAGTTTGT...ATGGAAGAGTTCCTGCAGGAGTGCCTCACCTTGGGCAGTTACTTGACTCTTTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CCA 90 bp TGCTGGCAGTTGGGTCTTGGGCCAAACAGGTCATTTCTAAGTCAATCAGCCTTTACAACTGCGGCTCCTTaGCATTTCTTACCGCTGCTG +
Preference number: 4 (lower is better)
Translates to: CWQLGLGPNRSFLSQSAFTTAAP*HFLPLL
Trigger: CAGCAGCGGTAAGAAATGCCAAGGAGCCGCAGTTGT...AAAGGCTGATTGACTTAGAAATGACCTGTTTGGCCCAAGACCCAACTGCCAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000590884.5
CDS-3UTR CCA 90 bp GTGCTGTACATGCTTCACAATAATGCATCAGGTGCAACCAAAGGGCTCCTGCATAAAGAACTGCCTTGTTaGGGGATGACGCTGCGTCTC +
Preference number: 4 (lower is better)
Translates to: VLYMLHNNASGATKGLLHKELPC*GMTLRL
Trigger: GAGACGCAGCGTCATCCCCCAACAAGGCAGTTCTTT...ATGCAGGAGCCCTTTGGTTGCACCTGATGCATTATTGTGAAGCATGTACAGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000592272.5
CDS-3UTR CCA 90 bp GAGGAATTGAACCATCTGATGAGTAAAAGCTTGGCATTTTGGAACTGCATCAAGCCAGGGCTCTCAGAGTaGCCTTCCAACACTCGGGGC +
Preference number: 4 (lower is better)
Translates to: EELNHLMSKSLAFWNCIKPGLSE*PSNTRG
Trigger: GCCCCGAGTGTTGGAAGGCCACTCTGAGAGCCCTGG...CTTGATGCAGTTCCAAAATGCCAAGCTTTTACTCATCAGATGGTTCAATTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CCA 90 bp GAGGAATTGAACCATCTGATGAGTAAAAGCTTGGCATTTTGGAACTGCATCAAGGAGCATCAGAAGAGCTaGGAAGCACGGCGCCCTCGG +
Preference number: 4 (lower is better)
Translates to: EELNHLMSKSLAFWNCIKEHQKS*EARRPR
Trigger: CCGAGGGCGCCGTGCTTCCCAGCTCTTCTGATGCTC...CTTGATGCAGTTCCAAAATGCCAAGCTTTTACTCATCAGATGGTTCAATTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CCA 90 bp AATGACAGATTCTGTCAGGACGGAGTCATTCTGCTCTGTCTGAATGAGGGAGAGTTTCCTGCTGGCAGTTaGGTCTTGGGCCAAACAGGT +
Preference number: 4 (lower is better)
Translates to: NDRFCQDGVILLCLNEGEFPAGS*VLGQTG
Trigger: ACCTGTTTGGCCCAAGACCCAACTGCCAGCAGGAAA...CTCTCCCTCATTCAGACAGAGCAGAATGACTCCGTCCTGACAGAATCTGTCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CCA 90 bp TTTTGGGTGCTGTACATGCTTCACAATAATGCATCAGGTGCAACCAAAGGGCTCGTGCAGGTCCTTCCATaGCAGTTTCCGGTACGTGCT +
Preference number: 4 (lower is better)
Translates to: FWVLYMLHNNASGATKGLVQVLP*QFPVRA
Trigger: AGCACGTACCGGAAACTGCCATGGAAGGACCTGCAC...GAGCCCTTTGGTTGCACCTGATGCATTATTGTGAAGCATGTACAGCACCCAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000592272.5
CDS-3UTR CCA 90 bp TCTTCCTCCACGGAGCTTGGGTACACCTGTTCCAGCCACTTGCTTAAGATGAGCATAAGAAACAGCTCTTaGGGCTTCCTCGTTCCACTT +
Preference number: 4 (lower is better)
Translates to: SSSTELGYTCSSHLLKMSIRNSS*GFLVPL
Trigger: AAGTGGAACGAGGAAGCCCCAAGAGCTGTTTCTTAT...GCTCATCTTAAGCAAGTGGCTGGAACAGGTGTACCCAAGCTCCGTGGAGGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000592272.5
CDS-3UTR CCA 90 bp CACCTGCAAGCAAGCACCAACTTAAATGTATGCCCCAGGTGCCTCATTTGTCTCTTTCTGGGTGGGGACTaGAATTCCAGGCATCAGAGA +
Preference number: 4 (lower is better)
Translates to: HLQASTNLNVCPRCLICLFLGGD*NSRHQR
Trigger: TCTCTGATGCCTGGAATTCCAGTCCCCACCCAGAAA...GAGACAAATGAGGCACCTGGGGCATACATTTAAGTTGGTGCTTGCTTGCAGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CCA 90 bp GTCCCGAATCCACTGCTACTGTCATGCTATGTAGACAGTTGTGTAGACACATCTCATGCTGCGGGTTTCTaGGTGGGGACTGGAATTCCA +
Preference number: 4 (lower is better)
Translates to: VPNPLLLSCYVDSCVDTSHAAGF*VGTGIP
Trigger: TGGAATTCCAGTCCCCACCCAGAAACCCGCAGCATG...AGATGTGTCTACACAACTGTCTACATAGCATGACAGTAGCAGTGGATTCGGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CCA 90 bp TTTTGGGTGCTGTACATGCTTCACAATAATGCATCAGGTGCAACCAAAGGGCTCCATGCTGCGGGTTTCTaGGTGGGGACTGGAATTCCA +
Preference number: 4 (lower is better)
Translates to: FWVLYMLHNNASGATKGLHAAGF*VGTGIP
Trigger: TGGAATTCCAGTCCCCACCCAGAAACCCGCAGCATG...GAGCCCTTTGGTTGCACCTGATGCATTATTGTGAAGCATGTACAGCACCCAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000592272.5
CDS-3UTR CCA 90 bp GGTCCCGAGTGTGCAGGAAGGAGCTTTGGAAACATGTACAGGTGGGTCCCGAATGCATCAAGATGCTTCTaGCTGTCAGTAGGAATAGAA +
Preference number: 4 (lower is better)
Translates to: GPECAGRSFGNMYRWVPNASRCF*LSVGIE
Trigger: TTCTATTCCTACTGACAGCCAGAAGCATCTTGATGC...ATTCGGGACCCACCTGTACATGTTTCCAAAGCTCCTTCCTGCACACTCGGGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CCA 90 bp GTCCCGAGTGTGCAGGAAGGAGCTTTGGAAACATGTACAGGTGGGTCCCGAATCGCATCAAGATGCTTCTaGCTGTCAGTAGGAATAGAA +
Preference number: 4 (lower is better)
Translates to: VPSVQEGALETCTGGSRIASRCF*LSVGIE
Trigger: TTCTATTCCTACTGACAGCCAGAAGCATCTTGATGC...GATTCGGGACCCACCTGTACATGTTTCCAAAGCTCCTTCCTGCACACTCGGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CCA 90 bp AATTTCAGTAGATCTCCCGACCTGACCCAGTTTCCACAGACAAGTGTTTCAGCATTCCTCCACGGAGCTTaGGTACACCTGTTCCAGCCA +
Preference number: 4 (lower is better)
Translates to: NFSRSPDLTQFPQTSVSAFLHGA*VHLFQP
Trigger: TGGCTGGAACAGGTGTACCCAAGCTCCGTGGAGGAA...TGCTGAAACACTTGTCTGTGGAAACTGGGTCAGGTCGGGAGATCTACTGAAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CCA 90 bp TCACCTTCATTTGAAAGGAACGAGGACATGAACACTCTTGGCTTGTATGACATGCTGCCCATCACAGGCTaGACCACCAGGCACTGGACA +
Preference number: 4 (lower is better)
Translates to: SPSFERNEDMNTLGLYDMLPITG*TTRHWT
Trigger: TGTCCAGTGCCTGGTGGTCCAGCCTGTGATGGGCAG...CATGTCATACAAGCCAAGAGTGTTCATGTCCTCGTTCCTTTCAAATGAAGGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR CAA 72 bp CTGCCCCGAAGGAACTCTGCTGTTGGAATAGTCGCGTaGTTCATCATCATCAGGACTTCCATAAAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: LPRRNSAVGIVA*FIIIRTSIKRL
Trigger: CAGCCTCTTTATGGAAGTCCTGATGATGATGAACAACGCGACTATTCCAACAGCAGAGTTCCTTCGGGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR TCA 90 bp ATTAATAGGCAGTGGGACAACATGATTCCGGGATGCAGCCTGCCTCTGCAACCCATGCATTCCTTTAGTTaGCACAGATCAGAGGGAATG +
Preference number: 4 (lower is better)
Translates to: INRQWDNMIPGCSLPLQPMHSFS*HRSEGM
Trigger: CATTCCCTCTGATCTGTGTCAACTAAAGGAATGCAT...GGGTTGCAGAGGCAGGCTGCATCCCGGAATCATGTTGTCCCACTGCCTATTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR TCA 90 bp ATTAATAGGCAGTGGGACAACATGATTCCGGGATGCAGCCTGCCTCTGCAACCCAGGGATTGCATAAAATaGAAGACCCCTGATGGGTTA +
Preference number: 4 (lower is better)
Translates to: INRQWDNMIPGCSLPLQPRDCIK*KTPDGL
Trigger: TAACCCATCAGGGGTCTTTCATTTTATGCAATCCCT...GGGTTGCAGAGGCAGGCTGCATCCCGGAATCATGTTGTCCCACTGCCTATTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR TCA 90 bp GTCCCGAATCCACTGCTACTGTCATGCTATGTAGACAGTTGTGTAGACACATCTAGGATGAAACGTGGGTaGCTCTGTCATGTCAGGCAC +
Preference number: 4 (lower is better)
Translates to: VPNPLLLSCYVDSCVDTSRMKRG*LCHVRH
Trigger: GTGCCTGACATGACAGAGTCACCCACGTTTCATCCT...AGATGTGTCTACACAACTGTCTACATAGCATGACAGTAGCAGTGGATTCGGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR TCA 90 bp ATTAATAGGCAGTGGGACAACATGATTCCGGGATGCAGCCTGCCTCTGCAACCCTGTTCTCAAATGTCTTaGCTGGACCAGAATTCCCAA +
Preference number: 4 (lower is better)
Translates to: INRQWDNMIPGCSLPLQPCSQMS*LDQNSQ
Trigger: TTGGGAATTCTGGTCCAGTCAAGACATTTGAGAACA...GGGTTGCAGAGGCAGGCTGCATCCCGGAATCATGTTGTCCCACTGCCTATTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR TCA 90 bp GTCCCGAGTGTGCAGGAAGGAGCTTTGGAAACATGTACAGGTGGGTCCCGAATCATCTTATCCAGGACATaGACCACTGTTCTCAAATGT +
Preference number: 4 (lower is better)
Translates to: VPSVQEGALETCTGGSRIILSRT*TTVLKC
Trigger: ACATTTGAGAACAGTGGTTCATGTCCTGGATAAGAT...GATTCGGGACCCACCTGTACATGTTTCCAAAGCTCCTTCCTGCACACTCGGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR TCA 90 bp CACCTGCAAGCAAGCACCAACTTAAATGTATGCCCCAGGTGCCTCATTTGTCTCCCCACTTCATTGGGCTaGGTGCTTACAGATATGTGT +
Preference number: 4 (lower is better)
Translates to: HLQASTNLNVCPRCLICLPTSLG*VLTDMC
Trigger: ACACATATCTGTAAGCACTCAGCCCAATGAAGTGGG...GAGACAAATGAGGCACCTGGGGCATACATTTAAGTTGGTGCTTGCTTGCAGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR TCA 90 bp ATGACGCTGCGTCTCATCGCTGACGTAATCCACAATAGTAAAGAAAAGGCTAATAGTGGCAGGAGGGGGTaGTCAGAAGGTGTGACCAGA +
Preference number: 4 (lower is better)
Translates to: MTLRLIADVIHNSKEKANSGRRG*SEGVTR
Trigger: TCTGGTCACACCTTCTGATCACCCCCTCCTGCCACT...ATTAGCCTTTTCTTTACTATTGTGGATTACGTCAGCGATGAGACGCAGCGTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587884.1
CDS-3UTR TCA 90 bp GTAGGAATAGAAAGGCCCGCAGACACTTTTAGGAGCTTCATGATTAATTCAGCAAGTGGCAGGAGGGGGTaGTCAGAAGGTGTGACCAGA +
Preference number: 4 (lower is better)
Translates to: VGIERPADTFRSFMINSASGRRG*SEGVTR
Trigger: TCTGGTCACACCTTCTGATCACCCCCTCCTGCCACT...TGCTGAATTAATCATGAAGCTCCTAAAAGTGTCTGCGGGCCTTTCTATTCCTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR TCA 90 bp AGGCAGACAATCATGCTGCGGGTTTCTGGGTGGGGACTGGAATTCCAGGCATCATTCCACAATATTAAGTaGTGGTGGTTTAGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: RQTIMLRVSGWGLEFQASFHNIK*WWFSSF
Trigger: GAAGCTGCTAAACCACCATCACTTAATATTGTGGAA...TGATGCCTGGAATTCCAGTCCCCACCCAGAAACCCGCAGCATGATTGTCTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR TCA 90 bp GAGGAATTGAACCATCTGATGAGTAAAAGCTTGGCATTTTGGAACTGCATCAAGTGCCTTGTTGGGGGATaGCGCTGCGTCTCATCGCTG +
Preference number: 4 (lower is better)
Translates to: EELNHLMSKSLAFWNCIKCLVGG*RCVSSL
Trigger: CAGCGATGAGACGCAGCGTCATCCCCCAACAAGGCA...CTTGATGCAGTTCCAAAATGCCAAGCTTTTACTCATCAGATGGTTCAATTCCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR TCA 90 bp CACTTTGAAGAAGGCCTCCATGAGCATCTGGTCAGGGTGCAGGTCCTTCCATGGGTTTGGTCTACCAGTTaGACTTCCTTTGCCAATAAA +
Preference number: 4 (lower is better)
Translates to: HFEEGLHEHLVRVQVLPWVWSTS*TSFANK
Trigger: TTTATTGGCAAAGGAAGTTCAACTGGTAGACCAAAC...CCATGGAAGGACCTGCACCCTGACCAGATGCTCATGGAGGCCTTCTTCAAAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000592272.5
CDS-3UTR TCA 90 bp GTCCCGAGTGTGCAGGAAGGAGCTTTGGAAACATGTACAGGTGGGTCCCGAATCCTAGGACTGCTAAGGTaGTTTTTCCATTTTGTTCCA +
Preference number: 4 (lower is better)
Translates to: VPSVQEGALETCTGGSRILGLLR*FFHFVP
Trigger: TGGAACAAAATGGAAAAATCACCTTAGCAGTCCTAG...GATTCGGGACCCACCTGTACATGTTTCCAAAGCTCCTTCCTGCACACTCGGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR TCA 90 bp CATTCGGCAACTGTGAGTGGCTCTGCACCCAAGTGGAACTTAGTAAGTTTCTCTTCTGCTCTGTCTGAATaGGGGAGAGCTGAAGGACTT +
Preference number: 4 (lower is better)
Translates to: HSATVSGSAPKWNLVSFSSALSE*GRAEGL
Trigger: AAGTCCTTCAGCTCTCCCTCATTCAGACAGAGCAGA...AGAGAAACTTACTAAGTTCCACTTGGGTGCAGAGCCACTCACAGTTGCCGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR TCA 90 bp TGCATCAAGATGCTTCTGGCTGTCAGTAGGAATAGAAAGGCCCGCAGACACTTTTCTGCTCTGTCTGAATaGGGGAGAGCTGAAGGACTT +
Preference number: 4 (lower is better)
Translates to: CIKMLLAVSRNRKARRHFSALSE*GRAEGL
Trigger: AAGTCCTTCAGCTCTCCCTCATTCAGACAGAGCAGA...AAAGTGTCTGCGGGCCTTTCTATTCCTACTGACAGCCAGAAGCATCTTGATGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR TCA 90 bp ATTAATAGGCAGTGGGACAACATGATTCCGGGATGCAGCCTGCCTCTGCAACCCAACATACTGCTTACTTaGTGCCATGGATTCAAGAGC +
Preference number: 4 (lower is better)
Translates to: INRQWDNMIPGCSLPLQPNILLT*CHGFKS
Trigger: GCTCTTGAATCCATGGCATCAAGTAAGCAGTATGTT...GGGTTGCAGAGGCAGGCTGCATCCCGGAATCATGTTGTCCCACTGCCTATTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR TCA 90 bp GTCCCGAGTGTGCAGGAAGGAGCTTTGGAAACATGTACAGGTGGGTCCCGAATCGTGGCTTGCAATATTTaGTCCTGGTATTCAACATAC +
Preference number: 4 (lower is better)
Translates to: VPSVQEGALETCTGGSRIVACNI*SWYSTY
Trigger: GTATGTTGAATACCAGGATCAAATATTGCAAGCCAC...GATTCGGGACCCACCTGTACATGTTTCCAAAGCTCCTTCCTGCACACTCGGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR TCA 90 bp CACCTGCAAGCAAGCACCAACTTAAATGTATGCCCCAGGTGCCTCATTTGTCTCATTTTGATGATGAACTaGGAGGAACCAGGAGGCCGT +
Preference number: 4 (lower is better)
Translates to: HLQASTNLNVCPRCLICLILMMN*EEPGGR
Trigger: ACGGCCTCCTGGTTCCTCTCAGTTCATCATCAAAAT...GAGACAAATGAGGCACCTGGGGCATACATTTAAGTTGGTGCTTGCTTGCAGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR GCA 90 bp AATTTCAGTAGATCTCCCGACCTGACCCAGTTTCCACAGACAAGTGTTTCAGCAGGAATGCTTTCTGTCTaGTTAGACGCTCGGCCTTGC +
Preference number: 4 (lower is better)
Translates to: NFSRSPDLTQFPQTSVSAGMLSV*LDARPC
Trigger: GCAAGGCCGAGCGTCTAAGCAGACAGAAAGCATTCC...TGCTGAAACACTTGTCTGTGGAAACTGGGTCAGGTCGGGAGATCTACTGAAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR GCA 90 bp ATTAATAGGCAGTGGGACAACATGATTCCGGGATGCAGCCTGCCTCTGCAACCCATGGCTCACATACTGTaGCCAATGGTCACTTACATA +
Preference number: 4 (lower is better)
Translates to: INRQWDNMIPGCSLPLQPMAHIL*PMVTYI
Trigger: TATGTAAGTGACCATTGGGCACAGTATGTGAGCCAT...GGGTTGCAGAGGCAGGCTGCATCCCGGAATCATGTTGTCCCACTGCCTATTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR GCA 90 bp TCACCTTCATTTGAAAGGAACGAGGACATGAACACTCTTGGCTTGTATGACATGACGGAGGGCCTTGCTTaGAGCATGGTGGAAGTCAGC +
Preference number: 4 (lower is better)
Translates to: SPSFERNEDMNTLGLYDMTEGLA*SMVEVS
Trigger: GCTGACTTCCACCATGCTGCAAGCAAGGCCCTCCGT...CATGTCATACAAGCCAAGAGTGTTCATGTCCTCGTTCCTTTCAAATGAAGGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR GCA 90 bp ATGTCTGAACTAGCTCAGTGTCTTTATAGCACGTTCCTAGCCCAGAGTTTCCCACTCACCAGCTCCTTGTaGAGTTCTGGTGAAGTCAGG +
Preference number: 4 (lower is better)
Translates to: MSELAQCLYSTFLAQSFPLTSSL*SSGEVR
Trigger: CCTGACTTCACCAGAACTGCACAAGGAGCTGGTGAG...TGGGAAACTCTGGGCTAGGAACGTGCTATAAAGACACTGAGCTAGTTCAGACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR GCA 90 bp CATTCGGCAACTGTGAGTGGCTCTGCACCCAAGTGGAACTTAGTAAGTTTCTCTGTTCTGGCCTGCTGTTaGAACAGATTCAGGTCTGTG +
Preference number: 4 (lower is better)
Translates to: HSATVSGSAPKWNLVSFSVLACC*NRFRSV
Trigger: CACAGACCTGAATCTGTTGCAACAGCAGGCCAGAAC...AGAGAAACTTACTAAGTTCCACTTGGGTGCAGAGCCACTCACAGTTGCCGAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR GCA 90 bp AGCACACTCTGGTACGACACAATATCCACAAGATGCCATGAAAGTGAGCTTGTCTACCGCTGCTGCCTCTaGACTCCAAATGTAGTGTGG +
Preference number: 4 (lower is better)
Translates to: STLWYDTISTRCHESELVYRCCL*TPNVVW
Trigger: CCACACTACATTTGGAGTGCAGAGGCAGCAGCGGTA...GACAAGCTCACTTTCATGGCATCTTGTGGATATTGTGTCGTACCAGAGTGTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR GCA 90 bp CATTCGGCAACTGTGAGTGGCTCTGCACCCAAGTGGAACTTAGTAAGTTTCTCTCTGAACCGTGACAACTaGGGCTCCTTGGCATTTCTT +
Preference number: 4 (lower is better)
Translates to: HSATVSGSAPKWNLVSFSLNRDN*GSLAFL
Trigger: AAGAAATGCCAAGGAGCCGCAGTTGTCACGGTTCAG...AGAGAAACTTACTAAGTTCCACTTGGGTGCAGAGCCACTCACAGTTGCCGAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR GCA 90 bp GATACTGCCCCGAAGGAACTCTGCTGTTGGAATAGTCGCGTTGTTCATCATCATCTGAACCGTGACAACTaGGGCTCCTTGGCATTTCTT +
Preference number: 4 (lower is better)
Translates to: DTAPKELCCWNSRVVHHHLNRDN*GSLAFL
Trigger: AAGAAATGCCAAGGAGCCGCAGTTGTCACGGTTCAG...ATGATGATGAACAACGCGACTATTCCAACAGCAGAGTTCCTTCGGGGCAGTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR GCA 90 bp TCTTCCTCCACGGAGCTTGGGTACACCTGTTCCAGCCACTTGCTTAAGATGAGCATAGTCTCCATTACCTaGTTGTCTGACAAGAGAGCA +
Preference number: 4 (lower is better)
Translates to: SSSTELGYTCSSHLLKMSIVSIT*LSDKRA
Trigger: TGCTCTCTTGTCAGACAAGCAGGTAATGGAGACTAT...GCTCATCTTAAGCAAGTGGCTGGAACAGGTGTACCCAAGCTCCGTGGAGGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR GCA 90 bp AGCACACTCTGGTACGACACAATATCCACAAGATGCCATGAAAGTGAGCTTGTCTCAGCACTGTTTTCCTaGTGGCAGTTGGGTCTTGGG +
Preference number: 4 (lower is better)
Translates to: STLWYDTISTRCHESELVSALFS*WQLGLG
Trigger: CCCAAGACCCAACTGCCAGCAGGAAAACAGTGCTGA...GACAAGCTCACTTTCATGGCATCTTGTGGATATTGTGTCGTACCAGAGTGTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR GCA 90 bp ATGTCTGAACTAGCTCAGTGTCTTTATAGCACGTTCCTAGCCCAGAGTTTCCCACAGTCAGTGAACAGCTaGACAATGCTTGAGGCCACC +
Preference number: 4 (lower is better)
Translates to: MSELAQCLYSTFLAQSFPQSVNS*TMLEAT
Trigger: GGTGGCCTCAAGCATTGTGCAGCTGTTCACTGACTG...TGGGAAACTCTGGGCTAGGAACGTGCTATAAAGACACTGAGCTAGTTCAGACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR GCA 90 bp CTAACCCAGTTGACTTCACAGAGTACAGACCCCAAAAATAAGAAACAGCTCTTGGGAGGCAGACAATCATaGTGCGGGTTTCTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: LTQLTSQSTDPKNKKQLLGGRQS*CGFLGG
Trigger: CCCACCCAGAAACCCGCAGCATGATTGTCTGCCTCC...CAAGAGCTGTTTCTTATTTTTGGGGTCTGTACTCTGTGAAGTCAACTGGGTTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR GCA 90 bp TGCTTCTGGCTGTCAGTAGGAATAGAAAGGCCCGCAGACACTTTTAGGAGCTTCAGCATAAGATTCTTTTaGCAGGATGATGGACGGCGG +
Preference number: 4 (lower is better)
Translates to: CFWLSVGIERPADTFRSFSIRFF*QDDGRR
Trigger: CCGCCGTCCATCATCCTGGCAAAAGAATCTTATGCT...GAAGCTCCTAAAAGTGTCTGCGGGCCTTTCTATTCCTACTGACAGCCAGAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR GCA 90 bp ATTAATAGGCAGTGGGACAACATGATTCCGGGATGCAGCCTGCCTCTGCAACCCTTGGCATTTTGGAACTaGATCAAGATGCTTCTGGCT +
Preference number: 4 (lower is better)
Translates to: INRQWDNMIPGCSLPLQPLAFWN*IKMLLA
Trigger: AGCCAGAAGCATCTTGATGCAGTTCCAAAATGCCAA...GGGTTGCAGAGGCAGGCTGCATCCCGGAATCATGTTGTCCCACTGCCTATTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR GCA 90 bp GTCCCGAATCCACTGCTACTGTCATGCTATGTAGACAGTTGTGTAGACACATCTGCCCCGAAGGAACTCTaGTGTTGGAATAGTCGCGTT +
Preference number: 4 (lower is better)
Translates to: VPNPLLLSCYVDSCVDTSAPKEL*CWNSRV
Trigger: AACGCGACTATTCCAACAGCAGAGTTCCTTCGGGGC...AGATGTGTCTACACAACTGTCTACATAGCATGACAGTAGCAGTGGATTCGGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR GCA 90 bp TCACCTTCATTTGAAAGGAACGAGGACATGAACACTCTTGGCTTGTATGACATGTCCAGGTCCGGATACTaGCCCGAAGGAACTCTGCTG +
Preference number: 4 (lower is better)
Translates to: SPSFERNEDMNTLGLYDMSRSGY*PEGTLL
Trigger: CAGCAGAGTTCCTTCGGGGCAGTATCCGGACCTGGA...CATGTCATACAAGCCAAGAGTGTTCATGTCCTCGTTCCTTTCAAATGAAGGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR GCA 90 bp GTGCTGTACATGCTTCACAATAATGCATCAGGTGCAACCAAAGGGCTCCTGCATCCACAAAAACAGCTTTaGCTCTTCCTCCACGGAGCT +
Preference number: 4 (lower is better)
Translates to: VLYMLHNNASGATKGLLHPQKQL*LFLHGA
Trigger: AGCTCCGTGGAGGAAGAGGCAAAGCTGTTTTTGTGG...ATGCAGGAGCCCTTTGGTTGCACCTGATGCATTATTGTGAAGCATGTACAGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000592272.5
CDS-3UTR GCA 90 bp GCTGTTGGAATAGTCGCGTTGTTCATCATCATCAGGACTTCCATAAAGAGGCTGCCACGAGGTTCTGCCTaGTCTGAACCAAGAGCAGAA +
Preference number: 4 (lower is better)
Translates to: AVGIVALFIIIRTSIKRLPRGSA*SEPRAE
Trigger: TTCTGCTCTTGGTTCAGAGCAGGCAGAACCTCGTGG...CAGCCTCTTTATGGAAGTCCTGATGATGATGAACAACGCGACTATTCCAACAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR GCA 90 bp GTCCCGAATCCACTGCTACTGTCATGCTATGTAGACAGTTGTGTAGACACATCTCTGAGGTCCCGAGTGTaGAGGAAGGAGCTTTGGAAA +
Preference number: 4 (lower is better)
Translates to: VPNPLLLSCYVDSCVDTSLRSRV*RKELWK
Trigger: TTTCCAAAGCTCCTTCCTGCACACTCGGGACCTCAG...AGATGTGTCTACACAACTGTCTACATAGCATGACAGTAGCAGTGGATTCGGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CCA 90 bp CATTCGGCAACTGTGAGTGGCTCTGCACCCAAGTGGAACTTAGTAAGTTTCTCTTCGCTGGGCTTCATGTaGCACATAAACTCAGCTCGA +
Preference number: 4 (lower is better)
Translates to: HSATVSGSAPKWNLVSFSSLGFM*HINSAR
Trigger: TCGAGCTGAGTTTATGTGCCACATGAAGCCCAGCGA...AGAGAAACTTACTAAGTTCCACTTGGGTGCAGAGCCACTCACAGTTGCCGAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CCA 90 bp GCTGTTGGAATAGTCGCGTTGTTCATCATCATCAGGACTTCCATAAAGAGGCTGCGGGGCCCACTTCATTaGGCTGAGTGCTTACAGATA +
Preference number: 4 (lower is better)
Translates to: AVGIVALFIIIRTSIKRLRGPLH*AECLQI
Trigger: TATCTGTAAGCACTCAGCCCAATGAAGTGGGCCCCG...CAGCCTCTTTATGGAAGTCCTGATGATGATGAACAACGCGACTATTCCAACAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CCA 90 bp CTGCCCCGAAGGAACTCTGCTGTTGGAATAGTCGCGTTGTTCATCATCATCAGGGCTGCTTTACACAAGTaGTCCATGAGGAAGAGGATA +
Preference number: 4 (lower is better)
Translates to: LPRRNSAVGIVALFIIIRAALHK*SMRKRI
Trigger: TATCCTCTTCCTCATGGACCACTTGTGTAAAGCAGC...CCTGATGATGATGAACAACGCGACTATTCCAACAGCAGAGTTCCTTCGGGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CCA 90 bp GAGGAATTGAACCATCTGATGAGTAAAAGCTTGGCATTTTGGAACTGCATCAAGCAGCCTCTGGAGGGATaGCACGATGGGGAGCTTCAG +
Preference number: 4 (lower is better)
Translates to: EELNHLMSKSLAFWNCIKQPLEG*HDGELQ
Trigger: CTGAAGCTCCCCATCGTGCCATCCCTCCAGAGGCTG...CTTGATGCAGTTCCAAAATGCCAAGCTTTTACTCATCAGATGGTTCAATTCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CCA 90 bp TGCTGGCAGTTGGGTCTTGGGCCAAACAGGTCATTTCTAAGTCAATCAGCCTTTAATGGGACTCAAGCTTaGCCTGTGTCCACAGACCAA +
Preference number: 4 (lower is better)
Translates to: CWQLGLGPNRSFLSQSAFNGTQA*PVSTDQ
Trigger: TTGGTCTGTGGACACAGGCCAAGCTTGAGTCCCATT...AAAGGCTGATTGACTTAGAAATGACCTGTTTGGCCCAAGACCCAACTGCCAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000590884.5
CDS-3UTR CCA 90 bp CATTCGGCAACTGTGAGTGGCTCTGCACCCAAGTGGAACTTAGTAAGTTTCTCTACAAACTGCAGGGTGTaGAATGGGACTCAAGCTTGG +
Preference number: 4 (lower is better)
Translates to: HSATVSGSAPKWNLVSFSTNCRV*NGTQAW
Trigger: CCAAGCTTGAGTCCCATTCCACACCCTGCAGTTTGT...AGAGAAACTTACTAAGTTCCACTTGGGTGCAGAGCCACTCACAGTTGCCGAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CCA 90 bp TGCTGGCAGTTGGGTCTTGGGCCAAACAGGTCATTTCTAAGTCAATCAGCCTTTACAAACTGCAGGGTGTaGAATGGGACTCAAGCTTGG +
Preference number: 4 (lower is better)
Translates to: CWQLGLGPNRSFLSQSAFTNCRV*NGTQAW
Trigger: CCAAGCTTGAGTCCCATTCCACACCCTGCAGTTTGT...AAAGGCTGATTGACTTAGAAATGACCTGTTTGGCCCAAGACCCAACTGCCAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000590884.5
CDS-3UTR CCA 90 bp GAATTGAACCATCTGATGAGTAAAAGCTTGGCATTTTGGAACTGCATCAAGATGAGAGCAAGGGGAGGCTaGGGAGCCTCATGCTTCCGC +
Preference number: 4 (lower is better)
Translates to: ELNHLMSKSLAFWNCIKMRARGG*GASCFR
Trigger: GCGGAAGCATGAGGCTCCCCAGCCTCCCCTTGCTCT...CATCTTGATGCAGTTCCAAAATGCCAAGCTTTTACTCATCAGATGGTTCAATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CCA 90 bp AGCACACTCTGGTACGACACAATATCCACAAGATGCCATGAAAGTGAGCTTGTCAGCAGAGGAAATAACTaGCACAGGAGGCTTCGTCGG +
Preference number: 4 (lower is better)
Translates to: STLWYDTISTRCHESELVSRGNN*HRRLRR
Trigger: CCGACGAAGCCTCCTGTGCCAGTTATTTCCTCTGCT...GACAAGCTCACTTTCATGGCATCTTGTGGATATTGTGTCGTACCAGAGTGTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CCA 90 bp TTTTGGGTGCTGTACATGCTTCACAATAATGCATCAGGTGCAACCAAAGGGCTCGAAGAGCTGCGGTTCTaGCCTGCTGTTGCAACAGAT +
Preference number: 4 (lower is better)
Translates to: FWVLYMLHNNASGATKGLEELRF*PAVATD
Trigger: ATCTGTTGCAACAGCAGGCCAGAACCGCAGCTCTTC...GAGCCCTTTGGTTGCACCTGATGCATTATTGTGAAGCATGTACAGCACCCAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000592272.5
CDS-3UTR CCA 90 bp ATTAATAGGCAGTGGGACAACATGATTCCGGGATGCAGCCTGCCTCTGCAACCCGAAGCTGTTGGCTTATaGCTTCATTCTTATGCATGC +
Preference number: 4 (lower is better)
Translates to: INRQWDNMIPGCSLPLQPEAVGL*LHSYAC
Trigger: GCATGCATAAGAATGAAGCCATAAGCCAACAGCTTC...GGGTTGCAGAGGCAGGCTGCATCCCGGAATCATGTTGTCCCACTGCCTATTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CCA 90 bp TTTCCGGTACGTGCTATGGAAAGCGTACAGAATGAACTCTGGCATTTTGGGTGCTTTCTGGGTGGGGACTaGAATTCCAGGCATCAGAGA +
Preference number: 4 (lower is better)
Translates to: FPVRAMESVQNELWHFGCFLGGD*NSRHQR
Trigger: TCTCTGATGCCTGGAATTCCAGTCCCCACCCAGAAA...GCACCCAAAATGCCAGAGTTCATTCTGTACGCTTTCCATAGCACGTACCGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000592272.5
CDS-3UTR CCA 90 bp ATTAATAGGCAGTGGGACAACATGATTCCGGGATGCAGCCTGCCTCTGCAACCCAAGGAACTCTGCTGTTaGAATAGTCGCGTTGTTCAT +
Preference number: 4 (lower is better)
Translates to: INRQWDNMIPGCSLPLQPKELCC*NSRVVH
Trigger: ATGAACAACGCGACTATTCCAACAGCAGAGTTCCTT...GGGTTGCAGAGGCAGGCTGCATCCCGGAATCATGTTGTCCCACTGCCTATTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CCA 90 bp CACCTGCAAGCAAGCACCAACTTAAATGTATGCCCCAGGTGCCTCATTTGTCTCGAAGGGATACCAGAATaGGTCCCCATCCTGAATTCT +
Preference number: 4 (lower is better)
Translates to: HLQASTNLNVCPRCLICLEGIPE*VPILNS
Trigger: AGAATTCAGGATGGGGACCCATTCTGGTATCCCTTC...GAGACAAATGAGGCACCTGGGGCATACATTTAAGTTGGTGCTTGCTTGCAGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CCA 90 bp ATTAATAGGCAGTGGGACAACATGATTCCGGGATGCAGCCTGCCTCTGCAACCCACAAAGAACTCCATCTaGAGGTCTTGTGAGATGACT +
Preference number: 4 (lower is better)
Translates to: INRQWDNMIPGCSLPLQPTKNSI*RSCEMT
Trigger: AGTCATCTCACAAGACCTCCAGATGGAGTTCTTTGT...GGGTTGCAGAGGCAGGCTGCATCCCGGAATCATGTTGTCCCACTGCCTATTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CCA 90 bp TCGACAGGGGCAAGTGATGTGAATGAGGCTAGGGTCAGGGCCCGAGGGAATGCACAAGGTTGTCAGATCTaGAACATTTACATAAAACAG +
Preference number: 4 (lower is better)
Translates to: STGASDVNEARVRARGNAQGCQI*NIYIKQ
Trigger: CTGTTTTATGTAAATGTTCCAGATCTGACAACCTTG...TGCATTCCCTCGGGCCCTGACCCTAGCCTCATTCACATCACTTGCCCCTGTCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CCA 90 bp GGGGCAAGTGATGTGAATGAGGCTAGGGTCAGGGCCCGAGGGAATGCACAGACTATAATCACGATCAAGTaGTCGTATTTTACACATGAC +
Preference number: 4 (lower is better)
Translates to: GASDVNEARVRARGNAQTIITIK*SYFTHD
Trigger: GTCATGTGTAAAATACGACCACTTGATCGTGATTAT...AGTCTGTGCATTCCCTCGGGCCCTGACCCTAGCCTCATTCACATCACTTGCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CCA 90 bp ATTAATAGGCAGTGGGACAACATGATTCCGGGATGCAGCCTGCCTCTGCAACCCGGATACACGGCTGGATaGAAATTGACTTGTCATCAT +
Preference number: 4 (lower is better)
Translates to: INRQWDNMIPGCSLPLQPGYTAG*KLTCHH
Trigger: ATGATGACAAGTCAATTTCCATCCAGCCGTGTATCC...GGGTTGCAGAGGCAGGCTGCATCCCGGAATCATGTTGTCCCACTGCCTATTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CCA 90 bp TCGACAGGGGCAAGTGATGTGAATGAGGCTAGGGTCAGGGCCCGAGGGAATGCACCCTATAAACATTCTTaGTGGCTGTTTAGACATTTT +
Preference number: 4 (lower is better)
Translates to: STGASDVNEARVRARGNAPYKHS*WLFRHF
Trigger: AAAATGTCTAAACAGCCACCAAGAATGTTTATAGGG...TGCATTCCCTCGGGCCCTGACCCTAGCCTCATTCACATCACTTGCCCCTGTCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CCA 90 bp AATTTCAGTAGATCTCCCGACCTGACCCAGTTTCCACAGACAAGTGTTTCAGCAAAGGAAGCACTCTCTTaGCACCTGCAAGCAAGCACC +
Preference number: 4 (lower is better)
Translates to: NFSRSPDLTQFPQTSVSAKEALS*HLQAST
Trigger: GGTGCTTGCTTGCAGGTGCCAAGAGAGTGCTTCCTT...TGCTGAAACACTTGTCTGTGGAAACTGGGTCAGGTCGGGAGATCTACTGAAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CCA 90 bp ATGTCTGAACTAGCTCAGTGTCTTTATAGCACGTTCCTAGCCCAGAGTTTCCCAAAGGAAGCACTCTCTTaGCACCTGCAAGCAAGCACC +
Preference number: 4 (lower is better)
Translates to: MSELAQCLYSTFLAQSFPKEALS*HLQAST
Trigger: GGTGCTTGCTTGCAGGTGCCAAGAGAGTGCTTCCTT...TGGGAAACTCTGGGCTAGGAACGTGCTATAAAGACACTGAGCTAGTTCAGACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CCA 90 bp AGCCACGAGGTTCTGCCTGCTCTGAACCAAGAGCAGAATTCGAATGACAGATTCATCCCATCCTGGTGCTaGGGTCAATACTCAAAAGAC +
Preference number: 4 (lower is better)
Translates to: SHEVLPALNQEQNSNDRFIPSWC*GQYSKD
Trigger: GTCTTTTGAGTATTGACCCCAGCACCAGGATGGGAT...GAATCTGTCATTCGAATTCTGCTCTTGGTTCAGAGCAGGCAGAACCTCGTGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587884.1
CDS-3UTR CCA 90 bp CACCTGCAAGCAAGCACCAACTTAAATGTATGCCCCAGGTGCCTCATTTGTCTCATAAGAAACAGCTCTTaGGGCTTCCTCGTTCCACCT +
Preference number: 4 (lower is better)
Translates to: HLQASTNLNVCPRCLICLIRNSS*GFLVPP
Trigger: AGGTGGAACGAGGAAGCCCCAAGAGCTGTTTCTTAT...GAGACAAATGAGGCACCTGGGGCATACATTTAAGTTGGTGCTTGCTTGCAGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590854.5
CDS-3UTR TCA 90 bp AATTTCAGTAGATCTCCCGACCTGACCCAGTTTCCACAGACAAGTGTTTCAGCAAGATGGATTCCATGTTaGGCACTGTCCAGGCAAACC +
Preference number: 4 (lower is better)
Translates to: NFSRSPDLTQFPQTSVSARWIPC*ALSRQT
Trigger: GGTTTGCCTGGACAGTGCTCAACATGGAATCCATCT...TGCTGAAACACTTGTCTGTGGAAACTGGGTCAGGTCGGGAGATCTACTGAAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR TCA 90 bp AGCACACTCTGGTACGACACAATATCCACAAGATGCCATGAAAGTGAGCTTGTCAGATGGATTCCATGTTaGGCACTGTCCAGGCAAACC +
Preference number: 4 (lower is better)
Translates to: STLWYDTISTRCHESELVRWIPC*ALSRQT
Trigger: GGTTTGCCTGGACAGTGCTCAACATGGAATCCATCT...GACAAGCTCACTTTCATGGCATCTTGTGGATATTGTGTCGTACCAGAGTGTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR TCA 90 bp AGGCAGACAATCATGCTGCGGGTTTCTGGGTGGGGACTGGAATTCCAGGCATCAATAATATATATACATTaGAGAGCCTCACCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: RQTIMLRVSGWGLEFQASIIYIH*RASPAP
Trigger: AGGAGCTGGTGAGGCTCTTCAATGTATATATATTAT...TGATGCCTGGAATTCCAGTCCCCACCCAGAAACCCGCAGCATGATTGTCTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR TCA 90 bp GTAGGAATAGAAAGGCCCGCAGACACTTTTAGGAGCTTCATGATTAATTCAGCACCAGCAAAGGATCAGTaGAGTCCAGCTGCACGGACA +
Preference number: 4 (lower is better)
Translates to: VGIERPADTFRSFMINSAPAKDQ*SPAART
Trigger: TGTCCGTGCAGCTGGACTTCACTGATCCTTTGCTGG...TGCTGAATTAATCATGAAGCTCCTAAAAGTGTCTGCGGGCCTTTCTATTCCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR TCA 90 bp TCTTCCTCCACGGAGCTTGGGTACACCTGTTCCAGCCACTTGCTTAAGATGAGCTTCCACAATATTAAGTaGTGGTGGTTTAGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: SSSTELGYTCSSHLLKMSFHNIK*WWFSSF
Trigger: GAAGCTGCTAAACCACCATCACTTAATATTGTGGAA...GCTCATCTTAAGCAAGTGGCTGGAACAGGTGTACCCAAGCTCCGTGGAGGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR TCA 90 bp GTCCCGAGTGTGCAGGAAGGAGCTTTGGAAACATGTACAGGTGGGTCCCGAATCCCAATAAAATCATCATaGAAAGGAGGCAGACAATCA +
Preference number: 4 (lower is better)
Translates to: VPSVQEGALETCTGGSRIPIKSS*KGGRQS
Trigger: TGATTGTCTGCCTCCTTTTCATGATGATTTTATTGG...GATTCGGGACCCACCTGTACATGTTTCCAAAGCTCCTTCCTGCACACTCGGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR TCA 90 bp AGTGTTAGAAAGGCGCTTCCTTACCTGTTAGACAAAGGCGACTTCCGGCCAAACTTTGTTCCAGGGTGCTaGGGAATTGAACCATCTGAT +
Preference number: 4 (lower is better)
Translates to: SVRKALPYLLDKGDFRPNFVPGC*GIEPSD
Trigger: ATCAGATGGTTCAATTCCTCAGCACCCTGGAACAAA...GTTTGGCCGGAAGTCGCCTTTGTCTAACAGGTAAGGAAGCGCCTTTCTAACACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR TCA 90 bp TCGGGCGGGTTAAAGACAATGATATCGTCTAAGAGCTTAGACATTTCCTGTTCTGTGAGCTCGGGAACCTaGAGGGATACCAGAATGGGT +
Preference number: 4 (lower is better)
Translates to: SGGLKTMISSKSLDISCSVSSGT*RDTRMG
Trigger: ACCCATTCTGGTATCCCTTCAGGTTCCCGAGCTCAC...AGAACAGGAAATGTCTAAGCTCTTAGACGATATCATTGTCTTTAACCCGCCCGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR TCA 90 bp ATGACGCTGCGTCTCATCGCTGACGTAATCCACAATAGTAAAGAAAAGGCTAATAGTAACTGCCCAAGGTaGGGCACTCCTGCAGGAACT +
Preference number: 4 (lower is better)
Translates to: MTLRLIADVIHNSKEKANSNCPR*GTPAGT
Trigger: AGTTCCTGCAGGAGTGCCTCACCTTGGGCAGTTACT...ATTAGCCTTTTCTTTACTATTGTGGATTACGTCAGCGATGAGACGCAGCGTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587884.1
CDS-3UTR TCA 90 bp TCACCTTCATTTGAAAGGAACGAGGACATGAACACTCTTGGCTTGTATGACATGAGTAACTGCCCAAGGTaGGGCACTCCTGCAGGAACT +
Preference number: 4 (lower is better)
Translates to: SPSFERNEDMNTLGLYDMSNCPR*GTPAGT
Trigger: AGTTCCTGCAGGAGTGCCTCACCTTGGGCAGTTACT...CATGTCATACAAGCCAAGAGTGTTCATGTCCTCGTTCCTTTCAAATGAAGGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR TCA 90 bp AATTTCAGTAGATCTCCCGACCTGACCCAGTTTCCACAGACAAGTGTTTCAGCAAGGTTCTGCCTGCTCTaGACCAAGAGCAGAATTCGA +
Preference number: 4 (lower is better)
Translates to: NFSRSPDLTQFPQTSVSARFCLL*TKSRIR
Trigger: TCGAATTCTGCTCTTGGTTCAGAGCAGGCAGAACCT...TGCTGAAACACTTGTCTGTGGAAACTGGGTCAGGTCGGGAGATCTACTGAAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR TCA 90 bp TCACCTTCATTTGAAAGGAACGAGGACATGAACACTCTTGGCTTGTATGACATGGCATTCAGAGCCTGCTaGGCTTTGGGGGTCAGATGT +
Preference number: 4 (lower is better)
Translates to: SPSFERNEDMNTLGLYDMAFRAC*ALGVRC
Trigger: ACATCTGACCCCCAAAGCTCAGCAGGCTCTGAATGC...CATGTCATACAAGCCAAGAGTGTTCATGTCCTCGTTCCTTTCAAATGAAGGTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR TCA 90 bp ACAGATCCCTCTGAGACGGACATTTTGTGGCCTGTAAAACTCAAGAGACTAAACCATCTGGAGGTCTTGTaGGATGACTGGGACATTCGG +
Preference number: 4 (lower is better)
Translates to: TDPSETDILWPVKLKRLNHLEVL*DDWDIR
Trigger: CCGAATGTCCCAGTCATCTCACAAGACCTCCAGATG...GTTTAGTCTCTTGAGTTTTACAGGCCACAAAATGTCCGTCTCAGAGGGATCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR TCA 90 bp ATTAATAGGCAGTGGGACAACATGATTCCGGGATGCAGCCTGCCTCTGCAACCCGTCGTATTTTACACATaGCCCACTTTAACTAACTCG +
Preference number: 4 (lower is better)
Translates to: INRQWDNMIPGCSLPLQPVVFYT*PTLTNS
Trigger: CGAGTTAGTTAAAGTGGGTCATGTGTAAAATACGAC...GGGTTGCAGAGGCAGGCTGCATCCCGGAATCATGTTGTCCCACTGCCTATTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR TCA 90 bp CACCTGCAAGCAAGCACCAACTTAAATGTATGCCCCAGGTGCCTCATTTGTCTCAGGAACCTACCAGAGTaGAGGAAACCTCAAATACAG +
Preference number: 4 (lower is better)
Translates to: HLQASTNLNVCPRCLICLRNLPE*RKPQIQ
Trigger: CTGTATTTGAGGTTTCCTTCACTCTGGTAGGTTCCT...GAGACAAATGAGGCACCTGGGGCATACATTTAAGTTGGTGCTTGCTTGCAGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR TCA 90 bp AGCACACTCTGGTACGACACAATATCCACAAGATGCCATGAAAGTGAGCTTGTCAGACTGCAGCCCTGCTaGTTCTGCATCACTTTTGCT +
Preference number: 4 (lower is better)
Translates to: STLWYDTISTRCHESELVRLQPC*FCITFA
Trigger: AGCAAAAGTGATGCAGAATCAGCAGGGCTGCAGTCT...GACAAGCTCACTTTCATGGCATCTTGTGGATATTGTGTCGTACCAGAGTGTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587884.1
CDS-3UTR GCA 90 bp ATTAATAGGCAGTGGGACAACATGATTCCGGGATGCAGCCTGCCTCTGCAACCCACGGATACCAATTTCTaGAGCCAGAGAAGAATATCA +
Preference number: 4 (lower is better)
Translates to: INRQWDNMIPGCSLPLQPTDTNF*SQRRIS
Trigger: TGATATTCTTCTCTGGCTGCAGAAATTGGTATCCGT...GGGTTGCAGAGGCAGGCTGCATCCCGGAATCATGTTGTCCCACTGCCTATTAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR GCA 90 bp AATTTCAGTAGATCTCCCGACCTGACCCAGTTTCCACAGACAAGTGTTTCAGCACACAGAACTTCTCAATaGTGTGGCCCACAGCTGTCA +
Preference number: 4 (lower is better)
Translates to: NFSRSPDLTQFPQTSVSAHRTSQ*CGPQLS
Trigger: TGACAGCTGTGGGCCACAGCATTGAGAAGTTCTGTG...TGCTGAAACACTTGTCTGTGGAAACTGGGTCAGGTCGGGAGATCTACTGAAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR GCA 90 bp CACCTGCAAGCAAGCACCAACTTAAATGTATGCCCCAGGTGCCTCATTTGTCTCTTCCCAATAGTGGGATaGCTTCTGCACAGAACTTCT +
Preference number: 4 (lower is better)
Translates to: HLQASTNLNVCPRCLICLFPIVG*LLHRTS
Trigger: AGAAGTTCTGTGCAGAAGGCATCCCACTATTGGGAA...GAGACAAATGAGGCACCTGGGGCATACATTTAAGTTGGTGCTTGCTTGCAGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR GCA 90 bp ATTAATAGGCAGTGGGACAACATGATTCCGGGATGCAGCCTGCCTCTGCAACCCAGGAACAAGAGGAGATaGGATAAAAACTGCTCATTC +
Preference number: 4 (lower is better)
Translates to: INRQWDNMIPGCSLPLQPRNKRR*DKNCSF
Trigger: GAATGAGCAGTTTTTATCGCATCTCCTCTTGTTCCT...GGGTTGCAGAGGCAGGCTGCATCCCGGAATCATGTTGTCCCACTGCCTATTAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR GCA 90 bp TCCTTAAAGTCTGTTCGCTGTTTAAACACTGAAGCAAGTAGACGTAAAGAGTCACCCTTCACTGCCCTCTaGTGGAACACGGAGGGCCTT +
Preference number: 4 (lower is better)
Translates to: SLKSVRCLNTEASRRKESPFTAL*WNTEGL
Trigger: AAGGCCCTCCGTGTTCCAGCAGAGGGCAGTGAAGGG...TGACTCTTTACGTCTACTTGCTTCAGTGTTTAAACAGCGAACAGACTTTAAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR GCA 90 bp GGTCCCGAGTGTGCAGGAAGGAGCTTTGGAAACATGTACAGGTGGGTCCCGAATGAAACTCATGATAGATaGGCTCCATGTTCAAATACT +
Preference number: 4 (lower is better)
Translates to: GPECAGRSFGNMYRWVPNETHDR*APCSNT
Trigger: AGTATTTGAACATGGAGCGCATCTATCATGAGTTTC...ATTCGGGACCCACCTGTACATGTTTCCAAAGCTCCTTCCTGCACACTCGGGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR GCA 90 bp TCACCTTCATTTGAAAGGAACGAGGACATGAACACTCTTGGCTTGTATGACATGGCTGCACGGACAAACTaGAGGGTGTGGAATGGGACT +
Preference number: 4 (lower is better)
Translates to: SPSFERNEDMNTLGLYDMAARTN*RVWNGT
Trigger: AGTCCCATTCCACACCCTGCAGTTTGTCCGTGCAGC...CATGTCATACAAGCCAAGAGTGTTCATGTCCTCGTTCCTTTCAAATGAAGGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR GCA 90 bp ACAGATCCCTCTGAGACGGACATTTTGTGGCCTGTAAAACTCAAGAGACTAAACTCAGTGAAGTCCAGCTaGACGGACAAACTGCAGGGT +
Preference number: 4 (lower is better)
Translates to: TDPSETDILWPVKLKRLNSVKSS*TDKLQG
Trigger: ACCCTGCAGTTTGTCCGTGCAGCTGGACTTCACTGA...GTTTAGTCTCTTGAGTTTTACAGGCCACAAAATGTCCGTCTCAGAGGGATCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR GCA 90 bp GCTGTTGGAATAGTCGCGTTGTTCATCATCATCAGGACTTCCATAAAGAGGCTGGTTCTGGCCTGCTGTTaGAACAGATTCAGGTCTGTG +
Preference number: 4 (lower is better)
Translates to: AVGIVALFIIIRTSIKRLVLACC*NRFRSV
Trigger: CACAGACCTGAATCTGTTGCAACAGCAGGCCAGAAC...CAGCCTCTTTATGGAAGTCCTGATGATGATGAACAACGCGACTATTCCAACAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR GCA 90 bp TCTTCCTCCACGGAGCTTGGGTACACCTGTTCCAGCCACTTGCTTAAGATGAGCTCACGATTCACATACTaGTTTGGCATTGTGTCTAAC +
Preference number: 4 (lower is better)
Translates to: SSSTELGYTCSSHLLKMSSRFTY*FGIVSN
Trigger: GTTAGACACAATGCCAAAGCAGTATGTGAATCGTGA...GCTCATCTTAAGCAAGTGGCTGGAACAGGTGTACCCAAGCTCCGTGGAGGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR GCA 90 bp TTTTGGGTGCTGTACATGCTTCACAATAATGCATCAGGTGCAACCAAAGGGCTCGGCATTTCTTACCGCTaGTGCCTCTGCACTCCAAAT +
Preference number: 4 (lower is better)
Translates to: FWVLYMLHNNASGATKGLGISYR*CLCTPN
Trigger: ATTTGGAGTGCAGAGGCAGCAGCGGTAAGAAATGCC...GAGCCCTTTGGTTGCACCTGATGCATTATTGTGAAGCATGTACAGCACCCAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000592272.5
CDS-3UTR GCA 90 bp GCTGTTGGAATAGTCGCGTTGTTCATCATCATCAGGACTTCCATAAAGAGGCTGCTGAACCGTGACAACTaGGGCTCCTTGGCATTTCTT +
Preference number: 4 (lower is better)
Translates to: AVGIVALFIIIRTSIKRLLNRDN*GSLAFL
Trigger: AAGAAATGCCAAGGAGCCGCAGTTGTCACGGTTCAG...CAGCCTCTTTATGGAAGTCCTGATGATGATGAACAACGCGACTATTCCAACAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR GCA 90 bp CACCTGCAAGCAAGCACCAACTTAAATGTATGCCCCAGGTGCCTCATTTGTCTCCGTGATCAAGTTTTCTaGATGTACAGCAGCTTCCAC +
Preference number: 4 (lower is better)
Translates to: HLQASTNLNVCPRCLICLRDQVF*MYSSFH
Trigger: GTGGAAGCTGCTGTACATGCAGAAAACTTGATCACG...GAGACAAATGAGGCACCTGGGGCATACATTTAAGTTGGTGCTTGCTTGCAGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR GCA 90 bp AATTTCAGTAGATCTCCCGACCTGACCCAGTTTCCACAGACAAGTGTTTCAGCAGCAGGGAGCAGAGCCTaGTGTTCTTCAGAATGGTTT +
Preference number: 4 (lower is better)
Translates to: NFSRSPDLTQFPQTSVSAAGSRA*CSSEWF
Trigger: AAACCATTCTGAAGAACAGCAGGCTCTGCTCCCTGC...TGCTGAAACACTTGTCTGTGGAAACTGGGTCAGGTCGGGAGATCTACTGAAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR GCA 90 bp AGCACACTCTGGTACGACACAATATCCACAAGATGCCATGAAAGTGAGCTTGTCGCAGGGAGCAGAGCCTaGTGTTCTTCAGAATGGTTT +
Preference number: 4 (lower is better)
Translates to: STLWYDTISTRCHESELVAGSRA*CSSEWF
Trigger: AAACCATTCTGAAGAACAGCAGGCTCTGCTCCCTGC...GACAAGCTCACTTTCATGGCATCTTGTGGATATTGTGTCGTACCAGAGTGTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR GCA 90 bp CACCTGCAAGCAAGCACCAACTTAAATGTATGCCCCAGGTGCCTCATTTGTCTCTATGAACTCTGCAGGTaGAGCATTGGGAGTGAAGAA +
Preference number: 4 (lower is better)
Translates to: HLQASTNLNVCPRCLICLYELCR*SIGSEE
Trigger: TTCTTCACTCCCAATGCTGCACCTGCAGAGTTCATA...GAGACAAATGAGGCACCTGGGGCATACATTTAAGTTGGTGCTTGCTTGCAGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR GCA 90 bp GTAAAGAGTCAAGTAACTGCCCAAGGTGAGGCACTCCTGCAGGAACTCTTCCATTATGAACTCTGCAGGTaGAGCATTGGGAGTGAAGAA +
Preference number: 4 (lower is better)
Translates to: VKSQVTAQGEALLQELFHYELCR*SIGSEE
Trigger: TTCTTCACTCCCAATGCTGCACCTGCAGAGTTCATA...ATGGAAGAGTTCCTGCAGGAGTGCCTCACCTTGGGCAGTTACTTGACTCTTTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR GCA 90 bp GGTCCGGATACTGCCCCGAAGGAACTCTGCTGTTGGAATAGTCGCGTTGTTCATAGAAACTTCACCACTTaGTCATACAGCTGTATGAAC +
Preference number: 4 (lower is better)
Translates to: GPDTAPKELCCWNSRVVHRNFTT*SYSCMN
Trigger: GTTCATACAGCTGTATGAGCAAGTGGTGAAGTTTCT...ATGAACAACGCGACTATTCCAACAGCAGAGTTCCTTCGGGGCAGTATCCGGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR GCA 90 bp ATGACGCTGCGTCTCATCGCTGACGTAATCCACAATAGTAAAGAAAAGGCTAATGCCCCAGGCAGTAAGTaGCAAGTGAATGGACTCCAG +
Preference number: 4 (lower is better)
Translates to: MTLRLIADVIHNSKEKANAPGSK*QVNGLQ
Trigger: CTGGAGTCCATTCACTTGGCACTTACTGCCTGGGGC...ATTAGCCTTTTCTTTACTATTGTGGATTACGTCAGCGATGAGACGCAGCGTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587884.1
CDS-3UTR GCA 90 bp GGTCCGGATACTGCCCCGAAGGAACTCTGCTGTTGGAATAGTCGCGTTGTTCATTTTGGGTGCTGTACATaGTTCACAATAATGCATCAG +
Preference number: 4 (lower is better)
Translates to: GPDTAPKELCCWNSRVVHFGCCT*FTIMHQ
Trigger: CTGATGCATTATTGTGAAGCATGTACAGCACCCAAA...ATGAACAACGCGACTATTCCAACAGCAGAGTTCCTTCGGGGCAGTATCCGGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000592272.5
CDS-3UTR GCA 90 bp TGCATCAAGATGCTTCTGGCTGTCAGTAGGAATAGAAAGGCCCGCAGACACTTTGGAACTGCATCAAGATaGTTCTGGCTGTCAGTAGGA +
Preference number: 4 (lower is better)
Translates to: CIKMLLAVSRNRKARRHFGTASR*FWLSVG
Trigger: TCCTACTGACAGCCAGAAGCATCTTGATGCAGTTCC...AAAGTGTCTGCGGGCCTTTCTATTCCTACTGACAGCCAGAAGCATCTTGATGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR GCA 90 bp ACAGATCCCTCTGAGACGGACATTTTGTGGCCTGTAAAACTCAAGAGACTAAACAAGGTGAGGCACTCCTaGAGGAACTCTTCCATGGTG +
Preference number: 4 (lower is better)
Translates to: TDPSETDILWPVKLKRLNKVRHS*RNSSMV
Trigger: CACCATGGAAGAGTTCCTGCAGGAGTGCCTCACCTT...GTTTAGTCTCTTGAGTTTTACAGGCCACAAAATGTCCGTCTCAGAGGGATCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR GCA 90 bp AAGGCTAATGCCAACTTTCTGAATCCCAGGTGTAGGCTGCAACTTGTAGGCATTCCACAAAAACAGCTTTaGCTCTTCCTCCACGGAGCT +
Preference number: 4 (lower is better)
Translates to: KANANFLNPRCRLQLVGIPQKQL*LFLHGA
Trigger: AGCTCCGTGGAGGAAGAGGCAAAGCTGTTTTTGTGG...AATGCCTACAAGTTGCAGCCTACACCTGGGATTCAGAAAGTTGGCATTAGCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587884.1
CDS-3UTR GCA 90 bp TCCTTAAAGTCTGTTCGCTGTTTAAACACTGAAGCAAGTAGACGTAAAGAGTCACCGGCCAAACCCAATTaGCCCCAGGATCCCAGAGCT +
Preference number: 4 (lower is better)
Translates to: SLKSVRCLNTEASRRKESPAKPN*PQDPRA
Trigger: AGCTCTGGGATCCTGGGGGCAATTGGGTTTGGCCGG...TGACTCTTTACGTCTACTTGCTTCAGTGTTTAAACAGCGAACAGACTTTAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR GCA 90 bp TCACCTTCATTTGAAAGGAACGAGGACATGAACACTCTTGGCTTGTATGACATGAAAGGAAGGCAGCCATaGTTCGGGCAACCACTCGGA +
Preference number: 4 (lower is better)
Translates to: SPSFERNEDMNTLGLYDMKGRQP*FGQPLG
Trigger: TCCGAGTGGTTGCCCGAAGCATGGCTGCCTTCCTTT...CATGTCATACAAGCCAAGAGTGTTCATGTCCTCGTTCCTTTCAAATGAAGGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR GCA 90 bp ACAGATCCCTCTGAGACGGACATTTTGTGGCCTGTAAAACTCAAGAGACTAAACCATCTGTGCAAAACATaGTCCTCCCAGACTGCCAGC +
Preference number: 4 (lower is better)
Translates to: TDPSETDILWPVKLKRLNHLCKT*SSQTAS
Trigger: GCTGGCAGTCTGGGAGGAGCATGTTTTGCACAGATG...GTTTAGTCTCTTGAGTTTTACAGGCCACAAAATGTCCGTCTCAGAGGGATCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR GCA 90 bp AATTTCAGTAGATCTCCCGACCTGACCCAGTTTCCACAGACAAGTGTTTCAGCAACAGGGCCTTGGTCTTaGTTGATTCCCGTCTTGATG +
Preference number: 4 (lower is better)
Translates to: NFSRSPDLTQFPQTSVSATGPWS*LIPVLM
Trigger: CATCAAGACGGGAATCAAGCAAGACCAAGGCCCTGT...TGCTGAAACACTTGTCTGTGGAAACTGGGTCAGGTCGGGAGATCTACTGAAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR GCA 90 bp TCACCTTCATTTGAAAGGAACGAGGACATGAACACTCTTGGCTTGTATGACATGCTGATGCCCGAGGCATaGTGTGGAAACCGGACCAAA +
Preference number: 4 (lower is better)
Translates to: SPSFERNEDMNTLGLYDMLMPEA*CGNRTK
Trigger: TTTGGTCCGGTTTCCACAGCATGCCTCGGGCATCAG...CATGTCATACAAGCCAAGAGTGTTCATGTCCTCGTTCCTTTCAAATGAAGGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CCA 90 bp GGTCCCGAGTGTGCAGGAAGGAGCTTTGGAAACATGTACAGGTGGGTCCCGAATCGACTTTTAGCATTTTaGCAATCAGATGTCAGAGTA +
Preference number: 4 (lower is better)
Translates to: GPECAGRSFGNMYRWVPNRLLAF*QSDVRV
Trigger: TACTCTGACATCTGATTGCCAAAATGCTAAAAGTCG...ATTCGGGACCCACCTGTACATGTTTCCAAAGCTCCTTCCTGCACACTCGGGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CCA 90 bp GTCCCGAATCCACTGCTACTGTCATGCTATGTAGACAGTTGTGTAGACACATCTAGTCTTCGTCCACATTaGTTCTTCTGGCCTGAGCCA +
Preference number: 4 (lower is better)
Translates to: VPNPLLLSCYVDSCVDTSSLRPH*FFWPEP
Trigger: TGGCTCAGGCCAGAAGAACCAATGTGGACGAAGACT...AGATGTGTCTACACAACTGTCTACATAGCATGACAGTAGCAGTGGATTCGGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CCA 90 bp ACCACAAAAACAGCTTTGCCTCTTCCTCCACGGAGCTTGGGTACACCTGTTCCACAATACAACCATCTATaGGTAACCCATACTGTGGTC +
Preference number: 4 (lower is better)
Translates to: TTKTALPLPPRSLGTPVPQYNHL*VTHTVV
Trigger: GACCACAGTATGGGTTACCCATAGATGGTTGTATTG...TGGAACAGGTGTACCCAAGCTCCGTGGAGGAAGAGGCAAAGCTGTTTTTGTGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CCA 90 bp TCGGGCGGGTTAAAGACAATGATATCGTCTAAGAGCTTAGACATTTCCTGTTCTTTGCTTGCAGCATGGTaGAAGTCAGCCACCTCGGTC +
Preference number: 4 (lower is better)
Translates to: SGGLKTMISSKSLDISCSLLAAW*KSATSV
Trigger: GACCGAGGTGGCTGACTTCCACCATGCTGCAAGCAA...AGAACAGGAAATGTCTAAGCTCTTAGACGATATCATTGTCTTTAACCCGCCCGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CCA 90 bp GAGGAATTGAACCATCTGATGAGTAAAAGCTTGGCATTTTGGAACTGCATCAAGTTCACTGCCCTCTGCTaGAACACGGAGGGCCTTGCT +
Preference number: 4 (lower is better)
Translates to: EELNHLMSKSLAFWNCIKFTALC*NTEGLA
Trigger: AGCAAGGCCCTCCGTGTTCCAGCAGAGGGCAGTGAA...CTTGATGCAGTTCCAAAATGCCAAGCTTTTACTCATCAGATGGTTCAATTCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CCA 90 bp ACAGATCCCTCTGAGACGGACATTTTGTGGCCTGTAAAACTCAAGAGACTAAACGAAGAGCTGCGGTTCTaGCCTGCTGTTGCAACAGAT +
Preference number: 4 (lower is better)
Translates to: TDPSETDILWPVKLKRLNEELRF*PAVATD
Trigger: ATCTGTTGCAACAGCAGGCCAGAACCGCAGCTCTTC...GTTTAGTCTCTTGAGTTTTACAGGCCACAAAATGTCCGTCTCAGAGGGATCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CCA 90 bp TTCTGGCTGTCAGTAGGAATAGAAAGGCCCGCAGACACTTTTAGGAGCTTCATGCAAAATATCCTCATCTaGTTCAAGGCCCCAGGCAGT +
Preference number: 4 (lower is better)
Translates to: FWLSVGIERPADTFRSFMQNILI*FKAPGS
Trigger: ACTGCCTGGGGCCTTGAACCAGATGAGGATATTTTG...CATGAAGCTCCTAAAAGTGTCTGCGGGCCTTTCTATTCCTACTGACAGCCAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CCA 90 bp AATTTCAGTAGATCTCCCGACCTGACCCAGTTTCCACAGACAAGTGTTTCAGCACTGGCAGTTGGGTCTTaGGCCAAACAGGTCATTTCT +
Preference number: 4 (lower is better)
Translates to: NFSRSPDLTQFPQTSVSALAVGS*AKQVIS
Trigger: AGAAATGACCTGTTTGGCCCAAGACCCAACTGCCAG...TGCTGAAACACTTGTCTGTGGAAACTGGGTCAGGTCGGGAGATCTACTGAAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CCA 90 bp AAGGCTAATGCCAACTTTCTGAATCCCAGGTGTAGGCTGCAACTTGTAGGCATTCTGGCAGTTGGGTCTTaGGCCAAACAGGTCATTTCT +
Preference number: 4 (lower is better)
Translates to: KANANFLNPRCRLQLVGILAVGS*AKQVIS
Trigger: AGAAATGACCTGTTTGGCCCAAGACCCAACTGCCAG...AATGCCTACAAGTTGCAGCCTACACCTGGGATTCAGAAAGTTGGCATTAGCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587884.1
CDS-3UTR CCA 90 bp TCACCTTCATTTGAAAGGAACGAGGACATGAACACTCTTGGCTTGTATGACATGGCACTGTTTTCCTGCTaGCAGTTGGGTCTTGGGCCA +
Preference number: 4 (lower is better)
Translates to: SPSFERNEDMNTLGLYDMALFSC*QLGLGP
Trigger: TGGCCCAAGACCCAACTGCCAGCAGGAAAACAGTGC...CATGTCATACAAGCCAAGAGTGTTCATGTCCTCGTTCCTTTCAAATGAAGGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CCA 90 bp AGTGTTAGAAAGGCGCTTCCTTACCTGTTAGACAAAGGCGACTTCCGGCCAAACTTCCGGTACGTGCTATaGAAAGCGTACAGAATGAAC +
Preference number: 4 (lower is better)
Translates to: SVRKALPYLLDKGDFRPNFRYVL*KAYRMN
Trigger: GTTCATTCTGTACGCTTTCCATAGCACGTACCGGAA...GTTTGGCCGGAAGTCGCCTTTGTCTAACAGGTAAGGAAGCGCCTTTCTAACACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000592272.5
CDS-3UTR CCA 90 bp GTCCCGAGTGTGCAGGAAGGAGCTTTGGAAACATGTACAGGTGGGTCCCGAATCAAAAGCTTGGCATTTTaGAACTGCATCAAGATGCTT +
Preference number: 4 (lower is better)
Translates to: VPSVQEGALETCTGGSRIKSLAF*NCIKML
Trigger: AAGCATCTTGATGCAGTTCCAAAATGCCAAGCTTTT...GATTCGGGACCCACCTGTACATGTTTCCAAAGCTCCTTCCTGCACACTCGGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CCA 90 bp AGGCAGACAATCATGCTGCGGGTTTCTGGGTGGGGACTGGAATTCCAGGCATCAAAAAGCTTGGCATTTTaGAACTGCATCAAGATGCTT +
Preference number: 4 (lower is better)
Translates to: RQTIMLRVSGWGLEFQASKSLAF*NCIKML
Trigger: AAGCATCTTGATGCAGTTCCAAAATGCCAAGCTTTT...TGATGCCTGGAATTCCAGTCCCCACCCAGAAACCCGCAGCATGATTGTCTGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CCA 90 bp AATTTCAGTAGATCTCCCGACCTGACCCAGTTTCCACAGACAAGTGTTTCAGCAGAGCCTGCTGAGCTTTaGGGGTCAGATGTAATTCAG +
Preference number: 4 (lower is better)
Translates to: NFSRSPDLTQFPQTSVSAEPAEL*GSDVIQ
Trigger: CTGAATTACATCTGACCCCCAAAGCTCAGCAGGCTC...TGCTGAAACACTTGTCTGTGGAAACTGGGTCAGGTCGGGAGATCTACTGAAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CCA 90 bp GGTCCCGAGTGTGCAGGAAGGAGCTTTGGAAACATGTACAGGTGGGTCCCGAATTTGGAGGAACACAAATaGGGTTTAAAAGTAAGGGTA +
Preference number: 4 (lower is better)
Translates to: GPECAGRSFGNMYRWVPNLEEHK*GLKVRV
Trigger: TACCCTTACTTTTAAACCCCATTTGTGTTCCTCCAA...ATTCGGGACCCACCTGTACATGTTTCCAAAGCTCCTTCCTGCACACTCGGGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CCA 90 bp CACCTGCAAGCAAGCACCAACTTAAATGTATGCCCCAGGTGCCTCATTTGTCTCGAGAGATGTTTTTCATaGCAACCAGAATCCTGCCTC +
Preference number: 4 (lower is better)
Translates to: HLQASTNLNVCPRCLICLERCFS*QPESCL
Trigger: GAGGCAGGATTCTGGTTGCCATGAAAAACATCTCTC...GAGACAAATGAGGCACCTGGGGCATACATTTAAGTTGGTGCTTGCTTGCAGGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CCA 90 bp AATTTCAGTAGATCTCCCGACCTGACCCAGTTTCCACAGACAAGTGTTTCAGCAGGAAACATGTACAGGTaGGTCCCGAATCCACTGCTA +
Preference number: 4 (lower is better)
Translates to: NFSRSPDLTQFPQTSVSAGNMYR*VPNPLL
Trigger: TAGCAGTGGATTCGGGACCCACCTGTACATGTTTCC...TGCTGAAACACTTGTCTGTGGAAACTGGGTCAGGTCGGGAGATCTACTGAAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CCA 90 bp CATTCGGCAACTGTGAGTGGCTCTGCACCCAAGTGGAACTTAGTAAGTTTCTCTTGCAGGAAGGAGCTTTaGAAACATGTACAGGTGGGT +
Preference number: 4 (lower is better)
Translates to: HSATVSGSAPKWNLVSFSCRKEL*KHVQVG
Trigger: ACCCACCTGTACATGTTTCCAAAGCTCCTTCCTGCA...AGAGAAACTTACTAAGTTCCACTTGGGTGCAGAGCCACTCACAGTTGCCGAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CCA 90 bp ACAGATCCCTCTGAGACGGACATTTTGTGGCCTGTAAAACTCAAGAGACTAAACGCCCGAGGCATGCTGTaGAAACCGGACCAAAATGAA +
Preference number: 4 (lower is better)
Translates to: TDPSETDILWPVKLKRLNARGML*KPDQNE
Trigger: TTCATTTTGGTCCGGTTTCCACAGCATGCCTCGGGC...GTTTAGTCTCTTGAGTTTTACAGGCCACAAAATGTCCGTCTCAGAGGGATCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CCA 90 bp ATTAATAGGCAGTGGGACAACATGATTCCGGGATGCAGCCTGCCTCTGCAACCCGTCACACTAGATATGTaGGAAGAAAACGAGTTGAAC +
Preference number: 4 (lower is better)
Translates to: INRQWDNMIPGCSLPLQPVTLDM*EENELN
Trigger: GTTCAACTCGTTTTCTTCCCACATATCTAGTGTGAC...GGGTTGCAGAGGCAGGCTGCATCCCGGAATCATGTTGTCCCACTGCCTATTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR TCA 90 bp ACAGATCCCTCTGAGACGGACATTTTGTGGCCTGTAAAACTCAAGAGACTAAACTTGGGGTGCACTTTCTaGAAGTCCACCTTGTACCGA +
Preference number: 4 (lower is better)
Translates to: TDPSETDILWPVKLKRLNLGCTF*KSTLYR
Trigger: TCGGTACAAGGTGGACTTTCAGAAAGTGCACCCCAA...GTTTAGTCTCTTGAGTTTTACAGGCCACAAAATGTCCGTCTCAGAGGGATCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR TCA 90 bp ATGTCTGAACTAGCTCAGTGTCTTTATAGCACGTTCCTAGCCCAGAGTTTCCCATTCACTCTAGGTGTCTaGAAACCATGTTTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: MSELAQCLYSTFLAQSFPFTLGV*KPCLAG
Trigger: CCCAGCCAAACATGGTTTTCAGACACCTAGAGTGAA...TGGGAAACTCTGGGCTAGGAACGTGCTATAAAGACACTGAGCTAGTTCAGACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR TCA 90 bp ATTAATAGGCAGTGGGACAACATGATTCCGGGATGCAGCCTGCCTCTGCAACCCAAGGCAAATCTCTTCTaGGCTATTCATAGAAGAAAG +
Preference number: 4 (lower is better)
Translates to: INRQWDNMIPGCSLPLQPKANLF*AIHRRK
Trigger: CTTTCTTCTATGAATAGCTCAGAAGAGATTTGCCTT...GGGTTGCAGAGGCAGGCTGCATCCCGGAATCATGTTGTCCCACTGCCTATTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR TCA 90 bp GATACTGCCCCGAAGGAACTCTGCTGTTGGAATAGTCGCGTTGTTCATCATCATTCTTCCTGCATCAGCTaGAAAGCTGCTTTACACAAG +
Preference number: 4 (lower is better)
Translates to: DTAPKELCCWNSRVVHHHSSCIS*KAALHK
Trigger: CTTGTGTAAAGCAGCTTTTCAGCTGATGCAGGAAGA...ATGATGATGAACAACGCGACTATTCCAACAGCAGAGTTCCTTCGGGGCAGTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR TCA 90 bp CTCCGCGGAGCTTTGCATAAGCAGCCTGAGAATGTCACTGTACTGGTCAGGAAACATGGCTTAAAGAGCTaGATGATTACTGAATGTAGG +
Preference number: 4 (lower is better)
Translates to: LRGALHKQPENVTVLVRKHGLKS*MITECR
Trigger: CCTACATTCAGTAATCATTCAGCTCTTTAAGCCATG...TTTCCTGACCAGTACAGTGACATTCTCAGGCTGCTTATGCAAAGCTCCGCGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000590884.5
CDS-3UTR TCA 90 bp GCCCCGAAGGAACTCTGCTGTTGGAATAGTCGCGTTGTTCATCATCATCAGGACCATGGCTTAAAGAGCTaGATGATTACTGAATGTAGG +
Preference number: 4 (lower is better)
Translates to: APKELCCWNSRVVHHHQDHGLKS*MITECR
Trigger: CCTACATTCAGTAATCATTCAGCTCTTTAAGCCATG...GTCCTGATGATGATGAACAACGCGACTATTCCAACAGCAGAGTTCCTTCGGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR TCA 90 bp CTGCCCCGAAGGAACTCTGCTGTTGGAATAGTCGCGTTGTTCATCATCATCAGGAAAACTCTCATGCAGTaGGTCAATACAGTCAGTGAA +
Preference number: 4 (lower is better)
Translates to: LPRRNSAVGIVALFIIIRKTLMQ*VNTVSE
Trigger: TTCACTGACTGTATTGACTCACTGCATGAGAGTTTT...CCTGATGATGATGAACAACGCGACTATTCCAACAGCAGAGTTCCTTCGGGGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587884.1
CDS-3UTR TCA 90 bp AGCACACTCTGGTACGACACAATATCCACAAGATGCCATGAAAGTGAGCTTGTCGGAAAGCGTACAGAATaGACTCTGGCATTTTGGGTG +
Preference number: 4 (lower is better)
Translates to: STLWYDTISTRCHESELVGKRTE*TLAFWV
Trigger: CACCCAAAATGCCAGAGTTCATTCTGTACGCTTTCC...GACAAGCTCACTTTCATGGCATCTTGTGGATATTGTGTCGTACCAGAGTGTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000592272.5
CDS-3UTR TCA 90 bp GTAGGAATAGAAAGGCCCGCAGACACTTTTAGGAGCTTCATGATTAATTCAGCAATTCTTTTGCCAGGATaGTGGACGGCGGGTAATGGC +
Preference number: 4 (lower is better)
Translates to: VGIERPADTFRSFMINSAILLPG*WTAGNG
Trigger: GCCATTACCCGCCGTCCATCATCCTGGCAAAAGAAT...TGCTGAATTAATCATGAAGCTCCTAAAAGTGTCTGCGGGCCTTTCTATTCCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR TCA 90 bp AATTTCAGTAGATCTCCCGACCTGACCCAGTTTCCACAGACAAGTGTTTCAGCACCCCATCCTGAATTCTaGTTGAGAGGGCTTTCTTTG +
Preference number: 4 (lower is better)
Translates to: NFSRSPDLTQFPQTSVSAPHPEF*LRGLSL
Trigger: CAAAGAAAGCCCTCTCAATCAGAATTCAGGATGGGG...TGCTGAAACACTTGTCTGTGGAAACTGGGTCAGGTCGGGAGATCTACTGAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR TCA 90 bp ACAGATCCCTCTGAGACGGACATTTTGTGGCCTGTAAAACTCAAGAGACTAAACTCTGCTCTGTCTGAATaGGGGAGAGCTGAAGGACTT +
Preference number: 4 (lower is better)
Translates to: TDPSETDILWPVKLKRLNSALSE*GRAEGL
Trigger: AAGTCCTTCAGCTCTCCCTCATTCAGACAGAGCAGA...GTTTAGTCTCTTGAGTTTTACAGGCCACAAAATGTCCGTCTCAGAGGGATCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR TCA 90 bp ACAGATCCCTCTGAGACGGACATTTTGTGGCCTGTAAAACTCAAGAGACTAAACAGGTTCTGCCTGCTCTaGACCAAGAGCAGAATTCGA +
Preference number: 4 (lower is better)
Translates to: TDPSETDILWPVKLKRLNRFCLL*TKSRIR
Trigger: TCGAATTCTGCTCTTGGTTCAGAGCAGGCAGAACCT...GTTTAGTCTCTTGAGTTTTACAGGCCACAAAATGTCCGTCTCAGAGGGATCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR TCA 90 bp TCACCTTCATTTGAAAGGAACGAGGACATGAACACTCTTGGCTTGTATGACATGGGAGGTCTTGTGAGATaGCTGGGACATTCGGCAACT +
Preference number: 4 (lower is better)
Translates to: SPSFERNEDMNTLGLYDMGGLVR*LGHSAT
Trigger: AGTTGCCGAATGTCCCAGTCATCTCACAAGACCTCC...CATGTCATACAAGCCAAGAGTGTTCATGTCCTCGTTCCTTTCAAATGAAGGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR TCA 90 bp CATTCGGCAACTGTGAGTGGCTCTGCACCCAAGTGGAACTTAGTAAGTTTCTCTAGTAAGGGTACTGAGTaGCTTCCAAGGTTGTCAGAT +
Preference number: 4 (lower is better)
Translates to: HSATVSGSAPKWNLVSFSSKGTE*LPRLSD
Trigger: ATCTGACAACCTTGGAAGTCACTCAGTACCCTTACT...AGAGAAACTTACTAAGTTCCACTTGGGTGCAGAGCCACTCACAGTTGCCGAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR TCA 90 bp ATTAATAGGCAGTGGGACAACATGATTCCGGGATGCAGCCTGCCTCTGCAACCCTATATCACCTTCATTTaGAAGGAACGAGGACATGAA +
Preference number: 4 (lower is better)
Translates to: INRQWDNMIPGCSLPLQPYITFI*KERGHE
Trigger: TTCATGTCCTCGTTCCTTTCAAATGAAGGTGATATA...GGGTTGCAGAGGCAGGCTGCATCCCGGAATCATGTTGTCCCACTGCCTATTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR TCA 90 bp CACCTGCAAGCAAGCACCAACTTAAATGTATGCCCCAGGTGCCTCATTTGTCTCTCTATCAGTGCTCAATaGGAGACAGTACATCTGTAC +
Preference number: 4 (lower is better)
Translates to: HLQASTNLNVCPRCLICLSISAQ*ETVHLY
Trigger: GTACAGATGTACTGTCTCTCATTGAGCACTGATAGA...GAGACAAATGAGGCACCTGGGGCATACATTTAAGTTGGTGCTTGCTTGCAGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR TCA 90 bp ACCACAAAAACAGCTTTGCCTCTTCCTCCACGGAGCTTGGGTACACCTGTTCCACCTTGGTTAGCAGCATaGAAATCATATCACTGTTGT +
Preference number: 4 (lower is better)
Translates to: TTKTALPLPPRSLGTPVPPWLAA*KSYHCC
Trigger: ACAACAGTGATATGATTTTCATGCTGCTAACCAAGG...TGGAACAGGTGTACCCAAGCTCCGTGGAGGAAGAGGCAAAGCTGTTTTTGTGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590884.5
CDS-3UTR GCA 90 bp CATTCGGCAACTGTGAGTGGCTCTGCACCCAAGTGGAACTTAGTAAGTTTCTCTAGAGAAGGGATTTCCTaGTCTCTGGAGGTTTTTGGA +
Preference number: 4 (lower is better)
Translates to: HSATVSGSAPKWNLVSFSREGIS*SLEVFG
Trigger: TCCAAAAACCTCCAGAGAGCAGGAAATCCCTTCTCT...AGAGAAACTTACTAAGTTCCACTTGGGTGCAGAGCCACTCACAGTTGCCGAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR GCA 90 bp AGCACACTCTGGTACGACACAATATCCACAAGATGCCATGAAAGTGAGCTTGTCAGGAGTGATGTTGCCTaGCACAATCCAGCTTACCAA +
Preference number: 4 (lower is better)
Translates to: STLWYDTISTRCHESELVRSDVA*HNPAYQ
Trigger: TTGGTAAGCTGGATTGTGGCAGGCAACATCACTCCT...GACAAGCTCACTTTCATGGCATCTTGTGGATATTGTGTCGTACCAGAGTGTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR GCA 90 bp GTAGGAATAGAAAGGCCCGCAGACACTTTTAGGAGCTTCATGATTAATTCAGCATCAGTGAAGTCCAGCTaGACGGACAAACTGCAGGGT +
Preference number: 4 (lower is better)
Translates to: VGIERPADTFRSFMINSASVKSS*TDKLQG
Trigger: ACCCTGCAGTTTGTCCGTGCAGCTGGACTTCACTGA...TGCTGAATTAATCATGAAGCTCCTAAAAGTGTCTGCGGGCCTTTCTATTCCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR GCA 90 bp GAGGAATTGAACCATCTGATGAGTAAAAGCTTGGCATTTTGGAACTGCATCAAGAGATTCCCGAAGAGCTaGGGTTCTGGCCTGCTGTTG +
Preference number: 4 (lower is better)
Translates to: EELNHLMSKSLAFWNCIKRFPKS*GSGLLL
Trigger: CAACAGCAGGCCAGAACCGCAGCTCTTCGGGAATCT...CTTGATGCAGTTCCAAAATGCCAAGCTTTTACTCATCAGATGGTTCAATTCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR GCA 90 bp GATACTGCCCCGAAGGAACTCTGCTGTTGGAATAGTCGCGTTGTTCATCATCATATTTCTTACCGCTGCTaGCTCTGCACTCCAAATGTA +
Preference number: 4 (lower is better)
Translates to: DTAPKELCCWNSRVVHHHISYRC*LCTPNV
Trigger: TACATTTGGAGTGCAGAGGCAGCAGCGGTAAGAAAT...ATGATGATGAACAACGCGACTATTCCAACAGCAGAGTTCCTTCGGGGCAGTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR GCA 90 bp CATTCGGCAACTGTGAGTGGCTCTGCACCCAAGTGGAACTTAGTAAGTTTCTCTGCTTCTGCTTGCAACTaGTTCACTTCCTTCCGTAAA +
Preference number: 4 (lower is better)
Translates to: HSATVSGSAPKWNLVSFSASACN*FTSFRK
Trigger: TTTACGGAAGGAAGTGAAGCAGTTGCAAGCAGAAGC...AGAGAAACTTACTAAGTTCCACTTGGGTGCAGAGCCACTCACAGTTGCCGAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR GCA 90 bp TTCTGGCTGTCAGTAGGAATAGAAAGGCCCGCAGACACTTTTAGGAGCTTCATGTTAGCAGCTTCTGCTTaGAACTGCTTCACTTCCTTC +
Preference number: 4 (lower is better)
Translates to: FWLSVGIERPADTFRSFMLAASA*NCFTSF
Trigger: GAAGGAAGTGAAGCAGTTGCAAGCAGAAGCTGCTAA...CATGAAGCTCCTAAAAGTGTCTGCGGGCCTTTCTATTCCTACTGACAGCCAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR GCA 90 bp GTGCTGTACATGCTTCACAATAATGCATCAGGTGCAACCAAAGGGCTCCTGCATTGGTTTAGCAGCTTCTaGTTGCAACTGCTTCACTTC +
Preference number: 4 (lower is better)
Translates to: VLYMLHNNASGATKGLLHWFSSF*LQLLHF
Trigger: GAAGTGAAGCAGTTGCAAGCAGAAGCTGCTAAACCA...ATGCAGGAGCCCTTTGGTTGCACCTGATGCATTATTGTGAAGCATGTACAGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000592272.5
CDS-3UTR GCA 90 bp TGCATCAAGATGCTTCTGGCTGTCAGTAGGAATAGAAAGGCCCGCAGACACTTTTATGAACTCTGCAGGTaGAGCATTGGGAGTGAAGAA +
Preference number: 4 (lower is better)
Translates to: CIKMLLAVSRNRKARRHFYELCR*SIGSEE
Trigger: TTCTTCACTCCCAATGCTGCACCTGCAGAGTTCATA...AAAGTGTCTGCGGGCCTTTCTATTCCTACTGACAGCCAGAAGCATCTTGATGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR GCA 90 bp GTCCCGAATCCACTGCTACTGTCATGCTATGTAGACAGTTGTGTAGACACATCTGGAACTGCATCAAGATaGTTCTGGCTGTCAGTAGGA +
Preference number: 4 (lower is better)
Translates to: VPNPLLLSCYVDSCVDTSGTASR*FWLSVG
Trigger: TCCTACTGACAGCCAGAAGCATCTTGATGCAGTTCC...AGATGTGTCTACACAACTGTCTACATAGCATGACAGTAGCAGTGGATTCGGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR GCA 90 bp TCACCTTCATTTGAAAGGAACGAGGACATGAACACTCTTGGCTTGTATGACATGAAGGTGAGGCACTCCTaGAGGAACTCTTCCATGGTG +
Preference number: 4 (lower is better)
Translates to: SPSFERNEDMNTLGLYDMKVRHS*RNSSMV
Trigger: CACCATGGAAGAGTTCCTGCAGGAGTGCCTCACCTT...CATGTCATACAAGCCAAGAGTGTTCATGTCCTCGTTCCTTTCAAATGAAGGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR GCA 90 bp TCGGGCGGGTTAAAGACAATGATATCGTCTAAGAGCTTAGACATTTCCTGTTCTAAGGTGAGGCACTCCTaGAGGAACTCTTCCATGGTG +
Preference number: 4 (lower is better)
Translates to: SGGLKTMISSKSLDISCSKVRHS*RNSSMV
Trigger: CACCATGGAAGAGTTCCTGCAGGAGTGCCTCACCTT...AGAACAGGAAATGTCTAAGCTCTTAGACGATATCATTGTCTTTAACCCGCCCGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR GCA 90 bp ACAGATCCCTCTGAGACGGACATTTTGTGGCCTGTAAAACTCAAGAGACTAAACCCACAAAAACAGCTTTaGCTCTTCCTCCACGGAGCT +
Preference number: 4 (lower is better)
Translates to: TDPSETDILWPVKLKRLNPQKQL*LFLHGA
Trigger: AGCTCCGTGGAGGAAGAGGCAAAGCTGTTTTTGTGG...GTTTAGTCTCTTGAGTTTTACAGGCCACAAAATGTCCGTCTCAGAGGGATCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR GCA 90 bp AATTTCAGTAGATCTCCCGACCTGACCCAGTTTCCACAGACAAGTGTTTCAGCAAGGCAATGGCCAGGATaGCTTATAAATTGGGTGGCT +
Preference number: 4 (lower is better)
Translates to: NFSRSPDLTQFPQTSVSARQWPG*LINWVA
Trigger: AGCCACCCAATTTATAAGGCATCCTGGCCATTGCCT...TGCTGAAACACTTGTCTGTGGAAACTGGGTCAGGTCGGGAGATCTACTGAAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR GCA 90 bp ACAGATCCCTCTGAGACGGACATTTTGTGGCCTGTAAAACTCAAGAGACTAAACACAGGGCCTTGGTCTTaGTTGATTCCCGTCTTGATG +
Preference number: 4 (lower is better)
Translates to: TDPSETDILWPVKLKRLNTGPWS*LIPVLM
Trigger: CATCAAGACGGGAATCAAGCAAGACCAAGGCCCTGT...GTTTAGTCTCTTGAGTTTTACAGGCCACAAAATGTCCGTCTCAGAGGGATCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CCA 90 bp TCACCTTCATTTGAAAGGAACGAGGACATGAACACTCTTGGCTTGTATGACATGGAAGGGAGACTTCACTaGACTCTTCCCTCTGAGGAG +
Preference number: 4 (lower is better)
Translates to: SPSFERNEDMNTLGLYDMEGRLH*TLPSEE
Trigger: CTCCTCAGAGGGAAGAGTCCAGTGAAGTCTCCCTTC...CATGTCATACAAGCCAAGAGTGTTCATGTCCTCGTTCCTTTCAAATGAAGGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CCA 90 bp GTCCCGAATCCACTGCTACTGTCATGCTATGTAGACAGTTGTGTAGACACATCTAAAACCATGTTTGGCTaGGCAAGAACTCTGCAAGCC +
Preference number: 4 (lower is better)
Translates to: VPNPLLLSCYVDSCVDTSKTMFG*ARTLQA
Trigger: GGCTTGCAGAGTTCTTGCCCAGCCAAACATGGTTTT...AGATGTGTCTACACAACTGTCTACATAGCATGACAGTAGCAGTGGATTCGGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CCA 90 bp ATGTCTGAACTAGCTCAGTGTCTTTATAGCACGTTCCTAGCCCAGAGTTTCCCAGCCAATCCTGAGCCTTaGTTATGGCTCACATACTGT +
Preference number: 4 (lower is better)
Translates to: MSELAQCLYSTFLAQSFPANPEP*LWLTYC
Trigger: ACAGTATGTGAGCCATAACCAAGGCTCAGGATTGGC...TGGGAAACTCTGGGCTAGGAACGTGCTATAAAGACACTGAGCTAGTTCAGACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CCA 90 bp CATTCGGCAACTGTGAGTGGCTCTGCACCCAAGTGGAACTTAGTAAGTTTCTCTGAGAATCCCAGCATATaGCTTCTGTGCAAGGTACTT +
Preference number: 4 (lower is better)
Translates to: HSATVSGSAPKWNLVSFSENPSI*LLCKVL
Trigger: AAGTACCTTGCACAGAAGCCATATGCTGGGATTCTC...AGAGAAACTTACTAAGTTCCACTTGGGTGCAGAGCCACTCACAGTTGCCGAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CCA 90 bp AATTTCAGTAGATCTCCCGACCTGACCCAGTTTCCACAGACAAGTGTTTCAGCAAGAGAGGATGAAACGTaGGTGACTCTGTCATGTCAG +
Preference number: 4 (lower is better)
Translates to: NFSRSPDLTQFPQTSVSAREDET*VTLSCQ
Trigger: CTGACATGACAGAGTCACCCACGTTTCATCCTCTCT...TGCTGAAACACTTGTCTGTGGAAACTGGGTCAGGTCGGGAGATCTACTGAAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CCA 90 bp ACAGATCCCTCTGAGACGGACATTTTGTGGCCTGTAAAACTCAAGAGACTAAACCTAGATAACAGCCAATaGGCATGCCCGCTTTCACAG +
Preference number: 4 (lower is better)
Translates to: TDPSETDILWPVKLKRLNLDNSQ*ACPLSQ
Trigger: CTGTGAAAGCGGGCATGCCCATTGGCTGTTATCTAG...GTTTAGTCTCTTGAGTTTTACAGGCCACAAAATGTCCGTCTCAGAGGGATCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CCA 90 bp CTAACCCAGTTGACTTCACAGAGTACAGACCCCAAAAATAAGAAACAGCTCTTGCGGGGCCCACTTCATTaGGCTGAGTGCTTACAGATA +
Preference number: 4 (lower is better)
Translates to: LTQLTSQSTDPKNKKQLLRGPLH*AECLQI
Trigger: TATCTGTAAGCACTCAGCCCAATGAAGTGGGCCCCG...CAAGAGCTGTTTCTTATTTTTGGGGTCTGTACTCTGTGAAGTCAACTGGGTTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CCA 90 bp TGCTGGCAGTTGGGTCTTGGGCCAAACAGGTCATTTCTAAGTCAATCAGCCTTTGCTGCTTTACACAAGTaGTCCATGAGGAAGAGGATA +
Preference number: 4 (lower is better)
Translates to: CWQLGLGPNRSFLSQSAFAALHK*SMRKRI
Trigger: TATCCTCTTCCTCATGGACCACTTGTGTAAAGCAGC...AAAGGCTGATTGACTTAGAAATGACCTGTTTGGCCCAAGACCCAACTGCCAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000590884.5
CDS-3UTR CCA 90 bp ACAGATCCCTCTGAGACGGACATTTTGTGGCCTGTAAAACTCAAGAGACTAAACGCTTTCTTCAGAGCTTaGTCAGGGGTGAAAGCAGAG +
Preference number: 4 (lower is better)
Translates to: TDPSETDILWPVKLKRLNAFFRA*SGVKAE
Trigger: CTCTGCTTTCACCCCTGACCAAGCTCTGAAGAAAGC...GTTTAGTCTCTTGAGTTTTACAGGCCACAAAATGTCCGTCTCAGAGGGATCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CCA 90 bp GCAGCACTTTCATTTCATTCCTTAAAGTCTGTTCGCTGTTTAAACACTGAAGCAGCCTTGCTTGCAGCATaGTGGAAGTCAGCCACCTCG +
Preference number: 4 (lower is better)
Translates to: AALSFHSLKSVRCLNTEAALLAA*WKSATS
Trigger: CGAGGTGGCTGACTTCCACCATGCTGCAAGCAAGGC...TGCTTCAGTGTTTAAACAGCGAACAGACTTTAAGGAATGAAATGAAAGTGCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CCA 90 bp GCAGCACTTTCATTTCATTCCTTAAAGTCTGTTCGCTGTTTAAACACTGAAGCATTCACTGCCCTCTGCTaGAACACGGAGGGCCTTGCT +
Preference number: 4 (lower is better)
Translates to: AALSFHSLKSVRCLNTEAFTALC*NTEGLA
Trigger: AGCAAGGCCCTCCGTGTTCCAGCAGAGGGCAGTGAA...TGCTTCAGTGTTTAAACAGCGAACAGACTTTAAGGAATGAAATGAAAGTGCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CCA 90 bp TCACCTTCATTTGAAAGGAACGAGGACATGAACACTCTTGGCTTGTATGACATGAGCAGAGGAAATAACTaGCACAGGAGGCTTCGTCGG +
Preference number: 4 (lower is better)
Translates to: SPSFERNEDMNTLGLYDMSRGNN*HRRLRR
Trigger: CCGACGAAGCCTCCTGTGCCAGTTATTTCCTCTGCT...CATGTCATACAAGCCAAGAGTGTTCATGTCCTCGTTCCTTTCAAATGAAGGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CCA 90 bp TCACCTTCATTTGAAAGGAACGAGGACATGAACACTCTTGGCTTGTATGACATGTGCACACCAGCTGGGTaGCGTCCTTCTGACTCAATA +
Preference number: 4 (lower is better)
Translates to: SPSFERNEDMNTLGLYDMCTPAG*RPSDSI
Trigger: TATTGAGTCAGAAGGACGCCACCCAGCTGGTGTGCA...CATGTCATACAAGCCAAGAGTGTTCATGTCCTCGTTCCTTTCAAATGAAGGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CCA 90 bp TCACCTTCATTTGAAAGGAACGAGGACATGAACACTCTTGGCTTGTATGACATGAAAGAACTGCCTTGTTaGGGGATGACGCTGCGTCTC +
Preference number: 4 (lower is better)
Translates to: SPSFERNEDMNTLGLYDMKELPC*GMTLRL
Trigger: GAGACGCAGCGTCATCCCCCAACAAGGCAGTTCTTT...CATGTCATACAAGCCAAGAGTGTTCATGTCCTCGTTCCTTTCAAATGAAGGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CCA 90 bp TCGGGCGGGTTAAAGACAATGATATCGTCTAAGAGCTTAGACATTTCCTGTTCTAAAGAACTGCCTTGTTaGGGGATGACGCTGCGTCTC +
Preference number: 4 (lower is better)
Translates to: SGGLKTMISSKSLDISCSKELPC*GMTLRL
Trigger: GAGACGCAGCGTCATCCCCCAACAAGGCAGTTCTTT...AGAACAGGAAATGTCTAAGCTCTTAGACGATATCATTGTCTTTAACCCGCCCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CCA 90 bp TTAATGCCACTGATAAATACCTGTCCCAAGATCTCAATACATGAAGTAAAGAACGAGCATCAGAAGAGCTaGGAAGCACGGCGCCCTCGG +
Preference number: 4 (lower is better)
Translates to: LMPLINTCPKISIHEVKNEHQKS*EARRPR
Trigger: CCGAGGGCGCCGTGCTTCCCAGCTCTTCTGATGCTC...GTTCTTTACTTCATGTATTGAGATCTTGGGACAGGTATTTATCAGTGGCATTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587884.1
CDS-3UTR CCA 90 bp AGCCACGAGGTTCTGCCTGCTCTGAACCAAGAGCAGAATTCGAATGACAGATTCGTACAGAATGAACTCTaGCATTTTGGGTGCTGTACA +
Preference number: 4 (lower is better)
Translates to: SHEVLPALNQEQNSNDRFVQNEL*HFGCCT
Trigger: TGTACAGCACCCAAAATGCCAGAGTTCATTCTGTAC...GAATCTGTCATTCGAATTCTGCTCTTGGTTCAGAGCAGGCAGAACCTCGTGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000592272.5
CDS-3UTR CCA 90 bp TCCTTAAAGTCTGTTCGCTGTTTAAACACTGAAGCAAGTAGACGTAAAGAGTCAGCCTCCATGAGCATCTaGTCAGGGTGCAGGTCCTTC +
Preference number: 4 (lower is better)
Translates to: SLKSVRCLNTEASRRKESASMSI*SGCRSF
Trigger: GAAGGACCTGCACCCTGACCAGATGCTCATGGAGGC...TGACTCTTTACGTCTACTTGCTTCAGTGTTTAAACAGCGAACAGACTTTAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000592272.5
CDS-3UTR CCA 90 bp GTGCTGTACATGCTTCACAATAATGCATCAGGTGCAACCAAAGGGCTCCTGCATATAAGAAACAGCTCTTaGGGCTTCCTCGTTCCACTT +
Preference number: 4 (lower is better)
Translates to: VLYMLHNNASGATKGLLHIRNSS*GFLVPL
Trigger: AAGTGGAACGAGGAAGCCCCAAGAGCTGTTTCTTAT...ATGCAGGAGCCCTTTGGTTGCACCTGATGCATTATTGTGAAGCATGTACAGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000592272.5
CDS-3UTR CCA 90 bp AGTGTTAGAAAGGCGCTTCCTTACCTGTTAGACAAAGGCGACTTCCGGCCAAACGCATCAAGATGCTTCTaGCTGTCAGTAGGAATAGAA +
Preference number: 4 (lower is better)
Translates to: SVRKALPYLLDKGDFRPNASRCF*LSVGIE
Trigger: TTCTATTCCTACTGACAGCCAGAAGCATCTTGATGC...GTTTGGCCGGAAGTCGCCTTTGTCTAACAGGTAAGGAAGCGCCTTTCTAACACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CCA 90 bp ATTAATAGGCAGTGGGACAACATGATTCCGGGATGCAGCCTGCCTCTGCAACCCAAACATAAACAGCAATaGGTTTTTCAAGAGCCTCAG +
Preference number: 4 (lower is better)
Translates to: INRQWDNMIPGCSLPLQPKHKQQ*VFQEPQ
Trigger: CTGAGGCTCTTGAAAAACCCATTGCTGTTTATGTTT...GGGTTGCAGAGGCAGGCTGCATCCCGGAATCATGTTGTCCCACTGCCTATTAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CCA 90 bp CACCTGCAAGCAAGCACCAACTTAAATGTATGCCCCAGGTGCCTCATTTGTCTCATGAGGATACACGGCTaGATGGAAATTGACTTGTCA +
Preference number: 4 (lower is better)
Translates to: HLQASTNLNVCPRCLICLMRIHG*MEIDLS
Trigger: TGACAAGTCAATTTCCATCCAGCCGTGTATCCTCAT...GAGACAAATGAGGCACCTGGGGCATACATTTAAGTTGGTGCTTGCTTGCAGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CCA 90 bp CACCTGCAAGCAAGCACCAACTTAAATGTATGCCCCAGGTGCCTCATTTGTCTCTTTCAGCAGGTCCATTaGCTTCATCTGAGTTTGAAG +
Preference number: 4 (lower is better)
Translates to: HLQASTNLNVCPRCLICLFQQVH*LHLSLK
Trigger: CTTCAAACTCAGATGAAGCCAATGGACCTGCTGAAA...GAGACAAATGAGGCACCTGGGGCATACATTTAAGTTGGTGCTTGCTTGCAGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CCA 90 bp TCACCTTCATTTGAAAGGAACGAGGACATGAACACTCTTGGCTTGTATGACATGCCCTCCCTCTATGTCTaGTGTGTTCCAGCATTCTGC +
Preference number: 4 (lower is better)
Translates to: SPSFERNEDMNTLGLYDMPSLYV*CVPAFC
Trigger: GCAGAATGCTGGAACACACCAGACATAGAGGGAGGG...CATGTCATACAAGCCAAGAGTGTTCATGTCCTCGTTCCTTTCAAATGAAGGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CCA 90 bp ACAGATCCCTCTGAGACGGACATTTTGTGGCCTGTAAAACTCAAGAGACTAAACGGAAACATGTACAGGTaGGTCCCGAATCCACTGCTA +
Preference number: 4 (lower is better)
Translates to: TDPSETDILWPVKLKRLNGNMYR*VPNPLL
Trigger: TAGCAGTGGATTCGGGACCCACCTGTACATGTTTCC...GTTTAGTCTCTTGAGTTTTACAGGCCACAAAATGTCCGTCTCAGAGGGATCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CCA 90 bp GTCCCGAATCCACTGCTACTGTCATGCTATGTAGACAGTTGTGTAGACACATCTGATAATTATGCCACTTaGACCACACTGGTGCGACTC +
Preference number: 4 (lower is better)
Translates to: VPNPLLLSCYVDSCVDTSDNYAT*TTLVRL
Trigger: GAGTCGCACCAGTGTGGTCCAAGTGGCATAATTATC...AGATGTGTCTACACAACTGTCTACATAGCATGACAGTAGCAGTGGATTCGGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CCA 90 bp ACAGATCCCTCTGAGACGGACATTTTGTGGCCTGTAAAACTCAAGAGACTAAACAAATACAGCTACTCCTaGACACTGATGCCCGAGGCA +
Preference number: 4 (lower is better)
Translates to: TDPSETDILWPVKLKRLNKYSYS*TLMPEA
Trigger: TGCCTCGGGCATCAGTGTCCAGGAGTAGCTGTATTT...GTTTAGTCTCTTGAGTTTTACAGGCCACAAAATGTCCGTCTCAGAGGGATCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR CAA 72 bp TGGTCTGTTCTTCACGATTCACATACTGCTTTGGCATaGTGTCTAACAGCTCACCATCCAGAGCAACCTGCT +
Preference number: 4 (lower is better)
Translates to: WSVLHDSHTALA*CLTAHHPEQPA
Trigger: AGCAGGTTGCTCTGGATGGTGAGCTGTTAGACACAATGCCAAAGCAGTATGTGAATCGTGAAGAACAGACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587884.1
CDS-3UTR TCA 90 bp CATTCGGCAACTGTGAGTGGCTCTGCACCCAAGTGGAACTTAGTAAGTTTCTCTGGTAGCGATGATAGCTaGAAACTTTCACTTGATCTG +
Preference number: 4 (lower is better)
Translates to: HSATVSGSAPKWNLVSFSGSDDS*KLSLDL
Trigger: CAGATCAAGTGAAAGTTTTCAGCTATCATCGCTACC...AGAGAAACTTACTAAGTTCCACTTGGGTGCAGAGCCACTCACAGTTGCCGAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR TCA 90 bp CATTCGGCAACTGTGAGTGGCTCTGCACCCAAGTGGAACTTAGTAAGTTTCTCTCTCCACTTGCAATCTTaGGAGCACAGAAGTATAAGA +
Preference number: 4 (lower is better)
Translates to: HSATVSGSAPKWNLVSFSLHLQS*EHRSIR
Trigger: TCTTATACTTCTGTGCTCTCAAGATTGCAAGTGGAG...AGAGAAACTTACTAAGTTCCACTTGGGTGCAGAGCCACTCACAGTTGCCGAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR TCA 90 bp CACCTGCAAGCAAGCACCAACTTAAATGTATGCCCCAGGTGCCTCATTTGTCTCAACCAAGAGTCATCCTaGTCATATAACCAATTCGCT +
Preference number: 4 (lower is better)
Translates to: HLQASTNLNVCPRCLICLNQESS*SYNQFA
Trigger: AGCGAATTGGTTATATGATCAGGATGACTCTTGGTT...GAGACAAATGAGGCACCTGGGGCATACATTTAAGTTGGTGCTTGCTTGCAGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR TCA 90 bp GTCCCGAATCCACTGCTACTGTCATGCTATGTAGACAGTTGTGTAGACACATCTCTCTCGACCAACCTTTaGAAAAGTCTCTCTGGTAGA +
Preference number: 4 (lower is better)
Translates to: VPNPLLLSCYVDSCVDTSLSTNL*KSLSGR
Trigger: TCTACCAGAGAGACTTTTTCAAAGGTTGGTCGAGAG...AGATGTGTCTACACAACTGTCTACATAGCATGACAGTAGCAGTGGATTCGGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR TCA 90 bp GAGGAATTGAACCATCTGATGAGTAAAAGCTTGGCATTTTGGAACTGCATCAAGAGAACTTCTGCCAAATaGGTGGCAGGAGGGGGTGAT +
Preference number: 4 (lower is better)
Translates to: EELNHLMSKSLAFWNCIKRTSAK*VAGGGD
Trigger: ATCACCCCCTCCTGCCACTCATTTGGCAGAAGTTCT...CTTGATGCAGTTCCAAAATGCCAAGCTTTTACTCATCAGATGGTTCAATTCCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR TCA 90 bp GTCCCGAATCCACTGCTACTGTCATGCTATGTAGACAGTTGTGTAGACACATCTATCCACAGATCCTGCTaGTTCTGCATCACTTTTGCT +
Preference number: 4 (lower is better)
Translates to: VPNPLLLSCYVDSCVDTSIHRSC*FCITFA
Trigger: AGCAAAAGTGATGCAGAATCAGCAGGATCTGTGGAT...AGATGTGTCTACACAACTGTCTACATAGCATGACAGTAGCAGTGGATTCGGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR TCA 90 bp AGCACACTCTGGTACGACACAATATCCACAAGATGCCATGAAAGTGAGCTTGTCATCCACAGATCCTGCTaGTTCTGCATCACTTTTGCT +
Preference number: 4 (lower is better)
Translates to: STLWYDTISTRCHESELVIHRSC*FCITFA
Trigger: AGCAAAAGTGATGCAGAATCAGCAGGATCTGTGGAT...GACAAGCTCACTTTCATGGCATCTTGTGGATATTGTGTCGTACCAGAGTGTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590884.5
ENST00000592272.5
CDS-3UTR TCA 90 bp CTGCCCCGAAGGAACTCTGCTGTTGGAATAGTCGCGTTGTTCATCATCATCAGGACTTGGTTAGCAGCATaGAAATCATATCACTGTTGT +
Preference number: 4 (lower is better)
Translates to: LPRRNSAVGIVALFIIIRTWLAA*KSYHCC
Trigger: ACAACAGTGATATGATTTTCATGCTGCTAACCAAGT...CCTGATGATGATGAACAACGCGACTATTCCAACAGCAGAGTTCCTTCGGGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000592272.5
CDS-3UTR TCA 90 bp AATTTCAGTAGATCTCCCGACCTGACCCAGTTTCCACAGACAAGTGTTTCAGCAAGTCAATACAGTCAGTaGACAGCTGCACAATGCTTG +
Preference number: 4 (lower is better)
Translates to: NFSRSPDLTQFPQTSVSASQYSQ*TAAQCL
Trigger: CAAGCATTGTGCAGCTGTTCACTGACTGTATTGACT...TGCTGAAACACTTGTCTGTGGAAACTGGGTCAGGTCGGGAGATCTACTGAAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR TCA 90 bp ACAGATCCCTCTGAGACGGACATTTTGTGGCCTGTAAAACTCAAGAGACTAAACGCGGGTAATGGCTGCTaGAATAACTTAGCACACTCT +
Preference number: 4 (lower is better)
Translates to: TDPSETDILWPVKLKRLNAGNGC*NNLAHS
Trigger: AGAGTGTGCTAAGTTATTTCAGCAGCCATTACCCGC...GTTTAGTCTCTTGAGTTTTACAGGCCACAAAATGTCCGTCTCAGAGGGATCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR TCA 90 bp AATTTCAGTAGATCTCCCGACCTGACCCAGTTTCCACAGACAAGTGTTTCAGCATTTGTTCCAGGGTGCTaGGGAATTGAACCATCTGAT +
Preference number: 4 (lower is better)
Translates to: NFSRSPDLTQFPQTSVSAFVPGC*GIEPSD
Trigger: ATCAGATGGTTCAATTCCTCAGCACCCTGGAACAAA...TGCTGAAACACTTGTCTGTGGAAACTGGGTCAGGTCGGGAGATCTACTGAAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR TCA 90 bp GCTGTTGGAATAGTCGCGTTGTTCATCATCATCAGGACTTCCATAAAGAGGCTGTTTGTTCCAGGGTGCTaGGGAATTGAACCATCTGAT +
Preference number: 4 (lower is better)
Translates to: AVGIVALFIIIRTSIKRLFVPGC*GIEPSD
Trigger: ATCAGATGGTTCAATTCCTCAGCACCCTGGAACAAA...CAGCCTCTTTATGGAAGTCCTGATGATGATGAACAACGCGACTATTCCAACAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR TCA 90 bp ACAGATCCCTCTGAGACGGACATTTTGTGGCCTGTAAAACTCAAGAGACTAAACCCCCATCCTGAATTCTaGTTGAGAGGGCTTTCTTTG +
Preference number: 4 (lower is better)
Translates to: TDPSETDILWPVKLKRLNPHPEF*LRGLSL
Trigger: CAAAGAAAGCCCTCTCAATCAGAATTCAGGATGGGG...GTTTAGTCTCTTGAGTTTTACAGGCCACAAAATGTCCGTCTCAGAGGGATCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR TCA 90 bp GTAGGAATAGAAAGGCCCGCAGACACTTTTAGGAGCTTCATGATTAATTCAGCATCTGCTCTGTCTGAATaGGGGAGAGCTGAAGGACTT +
Preference number: 4 (lower is better)
Translates to: VGIERPADTFRSFMINSASALSE*GRAEGL
Trigger: AAGTCCTTCAGCTCTCCCTCATTCAGACAGAGCAGA...TGCTGAATTAATCATGAAGCTCCTAAAAGTGTCTGCGGGCCTTTCTATTCCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR TCA 90 bp AATGAACTCTGGCATTTTGGGTGCTGTACATGCTTCACAATAATGCATCAGGTGAGGTTCTGCCTGCTCTaGACCAAGAGCAGAATTCGA +
Preference number: 4 (lower is better)
Translates to: NELWHFGCCTCFTIMHQVRFCLL*TKSRIR
Trigger: TCGAATTCTGCTCTTGGTTCAGAGCAGGCAGAACCT...CACCTGATGCATTATTGTGAAGCATGTACAGCACCCAAAATGCCAGAGTTCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000592272.5
CDS-3UTR TCA 90 bp ATGTCTGAACTAGCTCAGTGTCTTTATAGCACGTTCCTAGCCCAGAGTTTCCCACGGCTGGATGGAAATTaGCTTGTCATCATCTCTACT +
Preference number: 4 (lower is better)
Translates to: MSELAQCLYSTFLAQSFPRLDGN*LVIIST
Trigger: AGTAGAGATGATGACAAGTCAATTTCCATCCAGCCG...TGGGAAACTCTGGGCTAGGAACGTGCTATAAAGACACTGAGCTAGTTCAGACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR TCA 90 bp ATGTCTGAACTAGCTCAGTGTCTTTATAGCACGTTCCTAGCCCAGAGTTTCCCAAAAGGAACGAGGACATaGACACTCTTGGCTTGTATG +
Preference number: 4 (lower is better)
Translates to: MSELAQCLYSTFLAQSFPKGTRT*TLLACM
Trigger: CATACAAGCCAAGAGTGTTCATGTCCTCGTTCCTTT...TGGGAAACTCTGGGCTAGGAACGTGCTATAAAGACACTGAGCTAGTTCAGACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR TCA 90 bp GTCCCGAATCCACTGCTACTGTCATGCTATGTAGACAGTTGTGTAGACACATCTACAAGGTCAGGAGTTTaGAACCAGCTTGTCTCAATG +
Preference number: 4 (lower is better)
Translates to: VPNPLLLSCYVDSCVDTSTRSGV*NQLVSM
Trigger: CATTGAGACAAGCTGGTTTCAAACTCCTGACCTTGT...AGATGTGTCTACACAACTGTCTACATAGCATGACAGTAGCAGTGGATTCGGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR TCA 90 bp ATGTCTGAACTAGCTCAGTGTCTTTATAGCACGTTCCTAGCCCAGAGTTTCCCAAGGAACCTACCAGAGTaGAGGAAACCTCAAATACAG +
Preference number: 4 (lower is better)
Translates to: MSELAQCLYSTFLAQSFPRNLPE*RKPQIQ
Trigger: CTGTATTTGAGGTTTCCTTCACTCTGGTAGGTTCCT...TGGGAAACTCTGGGCTAGGAACGTGCTATAAAGACACTGAGCTAGTTCAGACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR GCA 90 bp TCACCTTCATTTGAAAGGAACGAGGACATGAACACTCTTGGCTTGTATGACATGAAGCAAGGGTTTCACTaGCACCAAAGCTGGTGCTTC +
Preference number: 4 (lower is better)
Translates to: SPSFERNEDMNTLGLYDMKQGFH*HQSWCF
Trigger: GAAGCACCAGCTTTGGTGGCAGTGAAACCCTTGCTT...CATGTCATACAAGCCAAGAGTGTTCATGTCCTCGTTCCTTTCAAATGAAGGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR GCA 90 bp AATGACAGATTCTGTCAGGACGGAGTCATTCTGCTCTGTCTGAATGAGGGAGAGCATCAGCTGAAAAGCTaGTTTACACAAGTGGTCCAT +
Preference number: 4 (lower is better)
Translates to: NDRFCQDGVILLCLNEGEHQLKS*FTQVVH
Trigger: ATGGACCACTTGTGTAAAGCAGCTTTTCAGCTGATG...CTCTCCCTCATTCAGACAGAGCAGAATGACTCCGTCCTGACAGAATCTGTCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR GCA 90 bp GAGGAATTGAACCATCTGATGAGTAAAAGCTTGGCATTTTGGAACTGCATCAAGTCAGTGAAGTCCAGCTaGACGGACAAACTGCAGGGT +
Preference number: 4 (lower is better)
Translates to: EELNHLMSKSLAFWNCIKSVKSS*TDKLQG
Trigger: ACCCTGCAGTTTGTCCGTGCAGCTGGACTTCACTGA...CTTGATGCAGTTCCAAAATGCCAAGCTTTTACTCATCAGATGGTTCAATTCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR GCA 90 bp AATGAACTCTGGCATTTTGGGTGCTGTACATGCTTCACAATAATGCATCAGGTGCAGCTGTATGAACTCTaGAGGTGCAGCATTGGGAGT +
Preference number: 4 (lower is better)
Translates to: NELWHFGCCTCFTIMHQVQLYEL*RCSIGS
Trigger: ACTCCCAATGCTGCACCTGCAGAGTTCATACAGCTG...CACCTGATGCATTATTGTGAAGCATGTACAGCACCCAAAATGCCAGAGTTCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000592272.5
CDS-3UTR GCA 90 bp CACCTGCAAGCAAGCACCAACTTAAATGTATGCCCCAGGTGCCTCATTTGTCTCTGTGTTCCAGCATTCTaGCCTTCACTTGTTCTATTA +
Preference number: 4 (lower is better)
Translates to: HLQASTNLNVCPRCLICLCVPAF*PSLVLL
Trigger: TAATAGAACAAGTGAAGGGCAGAATGCTGGAACACA...GAGACAAATGAGGCACCTGGGGCATACATTTAAGTTGGTGCTTGCTTGCAGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CCA 90 bp CACCTGCAAGCAAGCACCAACTTAAATGTATGCCCCAGGTGCCTCATTTGTCTCTGCAACACTTTGATCTaGATAAAAGGAACAGCCCAT +
Preference number: 4 (lower is better)
Translates to: HLQASTNLNVCPRCLICLCNTLI*IKGTAH
Trigger: ATGGGCTGTTCCTTTTATCCAGATCAAAGTGTTGCA...GAGACAAATGAGGCACCTGGGGCATACATTTAAGTTGGTGCTTGCTTGCAGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CCA 90 bp CATTCGGCAACTGTGAGTGGCTCTGCACCCAAGTGGAACTTAGTAAGTTTCTCTAAATGCCAAGTCTTTTaGCCTTCAGCACATGTAGGA +
Preference number: 4 (lower is better)
Translates to: HSATVSGSAPKWNLVSFSKCQVF*PSAHVG
Trigger: TCCTACATGTGCTGAAGGCCAAAAGACTTGGCATTT...AGAGAAACTTACTAAGTTCCACTTGGGTGCAGAGCCACTCACAGTTGCCGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CCA 90 bp GTCCCGAATCCACTGCTACTGTCATGCTATGTAGACAGTTGTGTAGACACATCTGTTGGTAAAATGTTCTaGGTCTTGGAGCTGCTGCTT +
Preference number: 4 (lower is better)
Translates to: VPNPLLLSCYVDSCVDTSVGKMF*VLELLL
Trigger: AAGCAGCAGCTCCAAGACCCAGAACATTTTACCAAC...AGATGTGTCTACACAACTGTCTACATAGCATGACAGTAGCAGTGGATTCGGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CCA 90 bp GCTGTTGGAATAGTCGCGTTGTTCATCATCATCAGGACTTCCATAAAGAGGCTGGCTGCTTTACACAAGTaGTCCATGAGGAAGAGGATA +
Preference number: 4 (lower is better)
Translates to: AVGIVALFIIIRTSIKRLAALHK*SMRKRI
Trigger: TATCCTCTTCCTCATGGACCACTTGTGTAAAGCAGC...CAGCCTCTTTATGGAAGTCCTGATGATGATGAACAACGCGACTATTCCAACAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CCA 90 bp ACAGATCCCTCTGAGACGGACATTTTGTGGCCTGTAAAACTCAAGAGACTAAACATAACTCTCCGGAGCTaGGAGTCCTCTTCAAAGATG +
Preference number: 4 (lower is better)
Translates to: TDPSETDILWPVKLKRLNITLRS*ESSSKM
Trigger: CATCTTTGAAGAGGACTCCCAGCTCCGGAGAGTTAT...GTTTAGTCTCTTGAGTTTTACAGGCCACAAAATGTCCGTCTCAGAGGGATCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CCA 90 bp CACCTGCAAGCAAGCACCAACTTAAATGTATGCCCCAGGTGCCTCATTTGTCTCACTCCAAATGTAGTGTaGTCTGTTCTTCACGATTCA +
Preference number: 4 (lower is better)
Translates to: HLQASTNLNVCPRCLICLTPNVV*SVLHDS
Trigger: TGAATCGTGAAGAACAGACCACACTACATTTGGAGT...GAGACAAATGAGGCACCTGGGGCATACATTTAAGTTGGTGCTTGCTTGCAGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CCA 90 bp GTAAAGAGTCAAGTAACTGCCCAAGGTGAGGCACTCCTGCAGGAACTCTTCCATACTCCAAATGTAGTGTaGTCTGTTCTTCACGATTCA +
Preference number: 4 (lower is better)
Translates to: VKSQVTAQGEALLQELFHTPNVV*SVLHDS
Trigger: TGAATCGTGAAGAACAGACCACACTACATTTGGAGT...ATGGAAGAGTTCCTGCAGGAGTGCCTCACCTTGGGCAGTTACTTGACTCTTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CCA 90 bp AATGACAGATTCTGTCAGGACGGAGTCATTCTGCTCTGTCTGAATGAGGGAGAGGAAGCTGTTGGCTTATaGCTTCATTCTTATGCATGC +
Preference number: 4 (lower is better)
Translates to: NDRFCQDGVILLCLNEGEEAVGL*LHSYAC
Trigger: GCATGCATAAGAATGAAGCCATAAGCCAACAGCTTC...CTCTCCCTCATTCAGACAGAGCAGAATGACTCCGTCCTGACAGAATCTGTCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CCA 90 bp GATACTGCCCCGAAGGAACTCTGCTGTTGGAATAGTCGCGTTGTTCATCATCATGCATCAAGATGCTTCTaGCTGTCAGTAGGAATAGAA +
Preference number: 4 (lower is better)
Translates to: DTAPKELCCWNSRVVHHHASRCF*LSVGIE
Trigger: TTCTATTCCTACTGACAGCCAGAAGCATCTTGATGC...ATGATGATGAACAACGCGACTATTCCAACAGCAGAGTTCCTTCGGGGCAGTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CCA 90 bp TGCTGGCAGTTGGGTCTTGGGCCAAACAGGTCATTTCTAAGTCAATCAGCCTTTAAGGAACTCTGCTGTTaGAATAGTCGCGTTGTTCAT +
Preference number: 4 (lower is better)
Translates to: CWQLGLGPNRSFLSQSAFKELCC*NSRVVH
Trigger: ATGAACAACGCGACTATTCCAACAGCAGAGTTCCTT...AAAGGCTGATTGACTTAGAAATGACCTGTTTGGCCCAAGACCCAACTGCCAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000590884.5
CDS-3UTR CCA 90 bp GAATTGAACCATCTGATGAGTAAAAGCTTGGCATTTTGGAACTGCATCAAGATGTTCCTCCACGGAGCTTaGGTACACCTGTTCCAGCCA +
Preference number: 4 (lower is better)
Translates to: ELNHLMSKSLAFWNCIKMFLHGA*VHLFQP
Trigger: TGGCTGGAACAGGTGTACCCAAGCTCCGTGGAGGAA...CATCTTGATGCAGTTCCAAAATGCCAAGCTTTTACTCATCAGATGGTTCAATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CCA 90 bp CATTCGGCAACTGTGAGTGGCTCTGCACCCAAGTGGAACTTAGTAAGTTTCTCTGCTTACTTGATGCCATaGATTCAAGAGCATTCAGAG +
Preference number: 4 (lower is better)
Translates to: HSATVSGSAPKWNLVSFSAYLMP*IQEHSE
Trigger: CTCTGAATGCTCTTGAATCCATGGCATCAAGTAAGC...AGAGAAACTTACTAAGTTCCACTTGGGTGCAGAGCCACTCACAGTTGCCGAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CCA 90 bp GTCCCGAATCCACTGCTACTGTCATGCTATGTAGACAGTTGTGTAGACACATCTGGCTCTGCACCCAAGTaGAACTTAGTAAGTTTCTCT +
Preference number: 4 (lower is better)
Translates to: VPNPLLLSCYVDSCVDTSGSAPK*NLVSFS
Trigger: AGAGAAACTTACTAAGTTCCACTTGGGTGCAGAGCC...AGATGTGTCTACACAACTGTCTACATAGCATGACAGTAGCAGTGGATTCGGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CCA 90 bp TCACCTTCATTTGAAAGGAACGAGGACATGAACACTCTTGGCTTGTATGACATGCCTGTCATGAAGATGTaGGGTGAGATCTGTCTTGGG +
Preference number: 4 (lower is better)
Translates to: SPSFERNEDMNTLGLYDMPVMKM*GEICLG
Trigger: CCCAAGACAGATCTCACCCCACATCTTCATGACAGG...CATGTCATACAAGCCAAGAGTGTTCATGTCCTCGTTCCTTTCAAATGAAGGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR CAA 72 bp GATGGCCACAGAACAAGGCAAAGTTACACACAGGCTTaGGTAATGAATGAACTGTCAACAACAGAAGGCACG +
Preference number: 4 (lower is better)
Translates to: DGHRTRQSYTQA*VMNELSTTEGT
Trigger: CGTGCCTTCTGTTGTTGACAGTTCATTCATTACCAAAGCCTGTGTGTAACTTTGCCTTGTTCTGTGGCCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR CAA 72 bp GTAGTGTGGTCTGTTCTTCACGATTCACATACTGCTTaGGCATTGTGTCTAACAGCTCACCATCCAGAGCAA +
Preference number: 4 (lower is better)
Translates to: VVWSVLHDSHTA*ALCLTAHHPEQ
Trigger: TTGCTCTGGATGGTGAGCTGTTAGACACAATGCCAAAGCAGTATGTGAATCGTGAAGAACAGACCACACTAC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587884.1
CDS-3UTR TCA 90 bp ACAGATCCCTCTGAGACGGACATTTTGTGGCCTGTAAAACTCAAGAGACTAAACTCAGATGGTCTCCTTTaGATTCACAGGCTAGAGAAG +
Preference number: 4 (lower is better)
Translates to: TDPSETDILWPVKLKRLNSDGLL*IHRLEK
Trigger: CTTCTCTAGCCTGTGAATTCAAAGGAGACCATCTGA...GTTTAGTCTCTTGAGTTTTACAGGCCACAAAATGTCCGTCTCAGAGGGATCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR TCA 90 bp GTCCCGAATCCACTGCTACTGTCATGCTATGTAGACAGTTGTGTAGACACATCTTTGCTTCCTACATCGTaGGTAGTTCAAAAGCAACTC +
Preference number: 4 (lower is better)
Translates to: VPNPLLLSCYVDSCVDTSLLPTS*VVQKQL
Trigger: GAGTTGCTTTTGAACTACTCACGATGTAGGAAGCAA...AGATGTGTCTACACAACTGTCTACATAGCATGACAGTAGCAGTGGATTCGGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR TCA 90 bp GTCCCGAATCCACTGCTACTGTCATGCTATGTAGACAGTTGTGTAGACACATCTGAACAGCTGAACTACTaGGCAATGCATAGATGTAAG +
Preference number: 4 (lower is better)
Translates to: VPNPLLLSCYVDSCVDTSEQLNY*AMHRCK
Trigger: CTTACATCTATGCATTGCTCAGTAGTTCAGCTGTTC...AGATGTGTCTACACAACTGTCTACATAGCATGACAGTAGCAGTGGATTCGGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR TCA 90 bp TCACCTTCATTTGAAAGGAACGAGGACATGAACACTCTTGGCTTGTATGACATGTTTAGAAGGAAGAGGTaGTCTCCAGGACAGCCAACT +
Preference number: 4 (lower is better)
Translates to: SPSFERNEDMNTLGLYDMFRRKR*SPGQPT
Trigger: AGTTGGCTGTCCTGGAGATCACCTCTTCCTTCTAAA...CATGTCATACAAGCCAAGAGTGTTCATGTCCTCGTTCCTTTCAAATGAAGGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR TCA 90 bp CTAACCCAGTTGACTTCACAGAGTACAGACCCCAAAAATAAGAAACAGCTCTTGCCCACTTCATTGGGCTaGGTGCTTACAGATATGTGT +
Preference number: 4 (lower is better)
Translates to: LTQLTSQSTDPKNKKQLLPTSLG*VLTDMC
Trigger: ACACATATCTGTAAGCACTCAGCCCAATGAAGTGGG...CAAGAGCTGTTTCTTATTTTTGGGGTCTGTACTCTGTGAAGTCAACTGGGTTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR TCA 90 bp CACCTGCAAGCAAGCACCAACTTAAATGTATGCCCCAGGTGCCTCATTTGTCTCATAATATATATACATTaGAGAGCCTCACCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: HLQASTNLNVCPRCLICLIIYIH*RASPAP
Trigger: AGGAGCTGGTGAGGCTCTTCAATGTATATATATTAT...GAGACAAATGAGGCACCTGGGGCATACATTTAAGTTGGTGCTTGCTTGCAGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR TCA 90 bp AGTGTTAGAAAGGCGCTTCCTTACCTGTTAGACAAAGGCGACTTCCGGCCAAACATAATATATATACATTaGAGAGCCTCACCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: SVRKALPYLLDKGDFRPNIIYIH*RASPAP
Trigger: AGGAGCTGGTGAGGCTCTTCAATGTATATATATTAT...GTTTGGCCGGAAGTCGCCTTTGTCTAACAGGTAAGGAAGCGCCTTTCTAACACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR TCA 90 bp AATGACAGATTCTGTCAGGACGGAGTCATTCTGCTCTGTCTGAATGAGGGAGAGTTCCACAATATTAAGTaGTGGTGGTTTAGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: NDRFCQDGVILLCLNEGEFHNIK*WWFSSF
Trigger: GAAGCTGCTAAACCACCATCACTTAATATTGTGGAA...CTCTCCCTCATTCAGACAGAGCAGAATGACTCCGTCCTGACAGAATCTGTCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR TCA 90 bp GCTGTTGGAATAGTCGCGTTGTTCATCATCATCAGGACTTCCATAAAGAGGCTGCATTCACTAAGGCCGTaGTCAAGTTTTCTGCATGTA +
Preference number: 4 (lower is better)
Translates to: AVGIVALFIIIRTSIKRLHSLRP*SSFLHV
Trigger: TACATGCAGAAAACTTGATCACGGCCTTAGTGAATG...CAGCCTCTTTATGGAAGTCCTGATGATGATGAACAACGCGACTATTCCAACAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR TCA 90 bp GAATTGAACCATCTGATGAGTAAAAGCTTGGCATTTTGGAACTGCATCAAGATGGCAGTAAGTGCCAAGTaGATGGACTCCAGAAGCCTG +
Preference number: 4 (lower is better)
Translates to: ELNHLMSKSLAFWNCIKMAVSAK*MDSRSL
Trigger: CAGGCTTCTGGAGTCCATTCACTTGGCACTTACTGC...CATCTTGATGCAGTTCCAAAATGCCAAGCTTTTACTCATCAGATGGTTCAATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000592272.5
CDS-3UTR TCA 90 bp AATAGTCGCGTTGTTCATCATCATCAGGACTTCCATAAAGAGGCTGCTGAGGGCCATGGCTTAAAGAGCTaGATGATTACTGAATGTAGG +
Preference number: 4 (lower is better)
Translates to: NSRVVHHHQDFHKEAAEGHGLKS*MITECR
Trigger: CCTACATTCAGTAATCATTCAGCTCTTTAAGCCATG...GCCCTCAGCAGCCTCTTTATGGAAGTCCTGATGATGATGAACAACGCGACTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR TCA 90 bp CATTCGGCAACTGTGAGTGGCTCTGCACCCAAGTGGAACTTAGTAAGTTTCTCTAAAACTCTCATGCAGTaGGTCAATACAGTCAGTGAA +
Preference number: 4 (lower is better)
Translates to: HSATVSGSAPKWNLVSFSKTLMQ*VNTVSE
Trigger: TTCACTGACTGTATTGACTCACTGCATGAGAGTTTT...AGAGAAACTTACTAAGTTCCACTTGGGTGCAGAGCCACTCACAGTTGCCGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR TCA 90 bp GTAAAGAGTCAAGTAACTGCCCAAGGTGAGGCACTCCTGCAGGAACTCTTCCATCCAATAAAATCATCATaGAAAGGAGGCAGACAATCA +
Preference number: 4 (lower is better)
Translates to: VKSQVTAQGEALLQELFHPIKSS*KGGRQS
Trigger: TGATTGTCTGCCTCCTTTTCATGATGATTTTATTGG...ATGGAAGAGTTCCTGCAGGAGTGCCTCACCTTGGGCAGTTACTTGACTCTTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR TCA 90 bp GTAGGAATAGAAAGGCCCGCAGACACTTTTAGGAGCTTCATGATTAATTCAGCAGCGGGTAATGGCTGCTaGAATAACTTAGCACACTCT +
Preference number: 4 (lower is better)
Translates to: VGIERPADTFRSFMINSAAGNGC*NNLAHS
Trigger: AGAGTGTGCTAAGTTATTTCAGCAGCCATTACCCGC...TGCTGAATTAATCATGAAGCTCCTAAAAGTGTCTGCGGGCCTTTCTATTCCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR TCA 90 bp GATACTGCCCCGAAGGAACTCTGCTGTTGGAATAGTCGCGTTGTTCATCATCATCTAGGACTGCTAAGGTaGTTTTTCCATTTTGTTCCA +
Preference number: 4 (lower is better)
Translates to: DTAPKELCCWNSRVVHHHLGLLR*FFHFVP
Trigger: TGGAACAAAATGGAAAAATCACCTTAGCAGTCCTAG...ATGATGATGAACAACGCGACTATTCCAACAGCAGAGTTCCTTCGGGGCAGTATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR TCA 90 bp GAGGAATTGAACCATCTGATGAGTAAAAGCTTGGCATTTTGGAACTGCATCAAGAATGGGTCCCCATCCTaGATTCTGATTGAGAGGGCT +
Preference number: 4 (lower is better)
Translates to: EELNHLMSKSLAFWNCIKNGSPS*ILIERA
Trigger: AGCCCTCTCAATCAGAATTCAGGATGGGGACCCATT...CTTGATGCAGTTCCAAAATGCCAAGCTTTTACTCATCAGATGGTTCAATTCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR TCA 90 bp AATTTCAGTAGATCTCCCGACCTGACCCAGTTTCCACAGACAAGTGTTTCAGCAGCTCTACAGTGCAATTaGGCAAAGTTACTTGTGCAA +
Preference number: 4 (lower is better)
Translates to: NFSRSPDLTQFPQTSVSAALQCN*AKLLVQ
Trigger: TTGCACAAGTAACTTTGCTCAATTGCACTGTAGAGC...TGCTGAAACACTTGTCTGTGGAAACTGGGTCAGGTCGGGAGATCTACTGAAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR TCA 90 bp CATTCGGCAACTGTGAGTGGCTCTGCACCCAAGTGGAACTTAGTAAGTTTCTCTGGGAAGAAAACGAGTTaGACACACTTAAGTATGTGT +
Preference number: 4 (lower is better)
Translates to: HSATVSGSAPKWNLVSFSGKKTS*THLSMC
Trigger: ACACATACTTAAGTGTGTTCAACTCGTTTTCTTCCC...AGAGAAACTTACTAAGTTCCACTTGGGTGCAGAGCCACTCACAGTTGCCGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR GCA 90 bp ACAGATCCCTCTGAGACGGACATTTTGTGGCCTGTAAAACTCAAGAGACTAAACTGTTCCTCCTTAAACTaGCACAGCCGACTTTTAGCA +
Preference number: 4 (lower is better)
Translates to: TDPSETDILWPVKLKRLNCSSLN*HSRLLA
Trigger: TGCTAAAAGTCGGCTGTGGCAGTTTAAGGAGGAACA...GTTTAGTCTCTTGAGTTTTACAGGCCACAAAATGTCCGTCTCAGAGGGATCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR GCA 90 bp ACAGATCCCTCTGAGACGGACATTTTGTGGCCTGTAAAACTCAAGAGACTAAACCACCGCTATCTCAGATaGAGAAGGTTGCCAAAGATA +
Preference number: 4 (lower is better)
Translates to: TDPSETDILWPVKLKRLNHRYLR*RRLPKI
Trigger: TATCTTTGGCAACCTTCTGCATCTGAGATAGCGGTG...GTTTAGTCTCTTGAGTTTTACAGGCCACAAAATGTCCGTCTCAGAGGGATCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR GCA 90 bp ACAGATCCCTCTGAGACGGACATTTTGTGGCCTGTAAAACTCAAGAGACTAAACCTTCATTGGGCTGAGTaGTTACAGATATGTGTGCCT +
Preference number: 4 (lower is better)
Translates to: TDPSETDILWPVKLKRLNLHWAE*LQICVP
Trigger: AGGCACACATATCTGTAAGCACTCAGCCCAATGAAG...GTTTAGTCTCTTGAGTTTTACAGGCCACAAAATGTCCGTCTCAGAGGGATCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR GCA 90 bp TCACCTTCATTTGAAAGGAACGAGGACATGAACACTCTTGGCTTGTATGACATGAGGAGTGATGTTGCCTaGCACAATCCAGCTTACCAA +
Preference number: 4 (lower is better)
Translates to: SPSFERNEDMNTLGLYDMRSDVA*HNPAYQ
Trigger: TTGGTAAGCTGGATTGTGGCAGGCAACATCACTCCT...CATGTCATACAAGCCAAGAGTGTTCATGTCCTCGTTCCTTTCAAATGAAGGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR GCA 90 bp TGCTTCTGGCTGTCAGTAGGAATAGAAAGGCCCGCAGACACTTTTAGGAGCTTCGAAACTCATGATAGATaGGCTCCATGTTCAAATACT +
Preference number: 4 (lower is better)
Translates to: CFWLSVGIERPADTFRSFETHDR*APCSNT
Trigger: AGTATTTGAACATGGAGCGCATCTATCATGAGTTTC...GAAGCTCCTAAAAGTGTCTGCGGGCCTTTCTATTCCTACTGACAGCCAGAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR GCA 90 bp TTCTGGCTGTCAGTAGGAATAGAAAGGCCCGCAGACACTTTTAGGAGCTTCATGTCACGATTCACATACTaGTTTGGCATTGTGTCTAAC +
Preference number: 4 (lower is better)
Translates to: FWLSVGIERPADTFRSFMSRFTY*FGIVSN
Trigger: GTTAGACACAATGCCAAAGCAGTATGTGAATCGTGA...CATGAAGCTCCTAAAAGTGTCTGCGGGCCTTTCTATTCCTACTGACAGCCAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR GCA 90 bp GAGGAATTGAACCATCTGATGAGTAAAAGCTTGGCATTTTGGAACTGCATCAAGCAGCTGTATGAACTCTaGAGGTGCAGCATTGGGAGT +
Preference number: 4 (lower is better)
Translates to: EELNHLMSKSLAFWNCIKQLYEL*RCSIGS
Trigger: ACTCCCAATGCTGCACCTGCAGAGTTCATACAGCTG...CTTGATGCAGTTCCAAAATGCCAAGCTTTTACTCATCAGATGGTTCAATTCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR GCA 90 bp TGCATCAAGATGCTTCTGGCTGTCAGTAGGAATAGAAAGGCCCGCAGACACTTTTTTGGGTGCTGTACATaGTTCACAATAATGCATCAG +
Preference number: 4 (lower is better)
Translates to: CIKMLLAVSRNRKARRHFFGCCT*FTIMHQ
Trigger: CTGATGCATTATTGTGAAGCATGTACAGCACCCAAA...AAAGTGTCTGCGGGCCTTTCTATTCCTACTGACAGCCAGAAGCATCTTGATGCA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000592272.5
CDS-3UTR GCA 90 bp GTAGGAATAGAAAGGCCCGCAGACACTTTTAGGAGCTTCATGATTAATTCAGCAGCAGTTTCCGGTACGTaGTATGGAAAGCGTACAGAA +
Preference number: 4 (lower is better)
Translates to: VGIERPADTFRSFMINSAAVSGT*YGKRTE
Trigger: TTCTGTACGCTTTCCATAGCACGTACCGGAAACTGC...TGCTGAATTAATCATGAAGCTCCTAAAAGTGTCTGCGGGCCTTTCTATTCCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000592272.5
CDS-3UTR GCA 90 bp AATTTCAGTAGATCTCCCGACCTGACCCAGTTTCCACAGACAAGTGTTTCAGCATTGGCATTTTGGAACTaGATCAAGATGCTTCTGGCT +
Preference number: 4 (lower is better)
Translates to: NFSRSPDLTQFPQTSVSALAFWN*IKMLLA
Trigger: AGCCAGAAGCATCTTGATGCAGTTCCAAAATGCCAA...TGCTGAAACACTTGTCTGTGGAAACTGGGTCAGGTCGGGAGATCTACTGAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR GCA 90 bp GCTGTTGGAATAGTCGCGTTGTTCATCATCATCAGGACTTCCATAAAGAGGCTGTTGGCATTTTGGAACTaGATCAAGATGCTTCTGGCT +
Preference number: 4 (lower is better)
Translates to: AVGIVALFIIIRTSIKRLLAFWN*IKMLLA
Trigger: AGCCAGAAGCATCTTGATGCAGTTCCAAAATGCCAA...CAGCCTCTTTATGGAAGTCCTGATGATGATGAACAACGCGACTATTCCAACAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR GCA 90 bp TCCTTAAAGTCTGTTCGCTGTTTAAACACTGAAGCAAGTAGACGTAAAGAGTCAGCCCCGAAGGAACTCTaGTGTTGGAATAGTCGCGTT +
Preference number: 4 (lower is better)
Translates to: SLKSVRCLNTEASRRKESAPKEL*CWNSRV
Trigger: AACGCGACTATTCCAACAGCAGAGTTCCTTCGGGGC...TGACTCTTTACGTCTACTTGCTTCAGTGTTTAAACAGCGAACAGACTTTAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR GCA 90 bp TCACCTTCATTTGAAAGGAACGAGGACATGAACACTCTTGGCTTGTATGACATGAACTGTGAGTGGCTCTaGACCCAAGTGGAACTTAGT +
Preference number: 4 (lower is better)
Translates to: SPSFERNEDMNTLGLYDMNCEWL*TQVELS
Trigger: ACTAAGTTCCACTTGGGTGCAGAGCCACTCACAGTT...CATGTCATACAAGCCAAGAGTGTTCATGTCCTCGTTCCTTTCAAATGAAGGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR GCA 90 bp ACAGATCCCTCTGAGACGGACATTTTGTGGCCTGTAAAACTCAAGAGACTAAACGTGTCTATCAAAGGGTaGAAACTTAGGTGTCGACAG +
Preference number: 4 (lower is better)
Translates to: TDPSETDILWPVKLKRLNVSIKG*KLRCRQ
Trigger: CTGTCGACACCTAAGTTTGCACCCTTTGATAGACAC...GTTTAGTCTCTTGAGTTTTACAGGCCACAAAATGTCCGTCTCAGAGGGATCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR GCA 90 bp ATGTCTGAACTAGCTCAGTGTCTTTATAGCACGTTCCTAGCCCAGAGTTTCCCACCACTGCTACTGTCATaGTATGTAGACAGTTGTGTA +
Preference number: 4 (lower is better)
Translates to: MSELAQCLYSTFLAQSFPPLLLS*YVDSCV
Trigger: TACACAACTGTCTACATAGCATGACAGTAGCAGTGG...TGGGAAACTCTGGGCTAGGAACGTGCTATAAAGACACTGAGCTAGTTCAGACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR GCA 90 bp TCACCTTCATTTGAAAGGAACGAGGACATGAACACTCTTGGCTTGTATGACATGAATGTATGCCCCAGGTaGCTCATTTGTCTCACCCTA +
Preference number: 4 (lower is better)
Translates to: SPSFERNEDMNTLGLYDMNVCPR*LICLTL
Trigger: TAGGGTGAGACAAATGAGGCACCTGGGGCATACATT...CATGTCATACAAGCCAAGAGTGTTCATGTCCTCGTTCCTTTCAAATGAAGGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR GCA 90 bp TCACCTTCATTTGAAAGGAACGAGGACATGAACACTCTTGGCTTGTATGACATGGGATTAAGGGCAAAGTaGCTTGTTGTTAGGCCTGTC +
Preference number: 4 (lower is better)
Translates to: SPSFERNEDMNTLGLYDMGLRAK*LVVRPV
Trigger: GACAGGCCTAACAACAAGGCACTTTGCCCTTAATCC...CATGTCATACAAGCCAAGAGTGTTCATGTCCTCGTTCCTTTCAAATGAAGGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CCA 90 bp AATTTCAGTAGATCTCCCGACCTGACCCAGTTTCCACAGACAAGTGTTTCAGCAGGAGGTGCTCAGATTTaGCATCGAATAGCTTCTTTA +
Preference number: 4 (lower is better)
Translates to: NFSRSPDLTQFPQTSVSAGGAQI*HRIASL
Trigger: TAAAGAAGCTATTCGATGCCAAATCTGAGCACCTCC...TGCTGAAACACTTGTCTGTGGAAACTGGGTCAGGTCGGGAGATCTACTGAAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CCA 90 bp GCAGCACTTTCATTTCATTCCTTAAAGTCTGTTCGCTGTTTAAACACTGAAGCAAGCTTCAGCTGGGTCTaGGCTTTCTTCAGAGCTTGG +
Preference number: 4 (lower is better)
Translates to: AALSFHSLKSVRCLNTEASFSWV*AFFRAW
Trigger: CCAAGCTCTGAAGAAAGCCCAGACCCAGCTGAAGCT...TGCTTCAGTGTTTAAACAGCGAACAGACTTTAAGGAATGAAATGAAAGTGCTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CCA 90 bp TCCTTAAAGTCTGTTCGCTGTTTAAACACTGAAGCAAGTAGACGTAAAGAGTCAAGCTTCAGCTGGGTCTaGGCTTTCTTCAGAGCTTGG +
Preference number: 4 (lower is better)
Translates to: SLKSVRCLNTEASRRKESSFSWV*AFFRAW
Trigger: CCAAGCTCTGAAGAAAGCCCAGACCCAGCTGAAGCT...TGACTCTTTACGTCTACTTGCTTCAGTGTTTAAACAGCGAACAGACTTTAAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CCA 90 bp CTTTCATTTCATTCCTTAAAGTCTGTTCGCTGTTTAAACACTGAAGCAAGTAGAGCCTTGCTTGCAGCATaGTGGAAGTCAGCCACCTCG +
Preference number: 4 (lower is better)
Translates to: LSFHSLKSVRCLNTEASRALLAA*WKSATS
Trigger: CGAGGTGGCTGACTTCCACCATGCTGCAAGCAAGGC...TCTACTTGCTTCAGTGTTTAAACAGCGAACAGACTTTAAGGAATGAAATGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CCA 90 bp GAGGAATTGAACCATCTGATGAGTAAAAGCTTGGCATTTTGGAACTGCATCAAGAATGGGACTCAAGCTTaGCCTGTGTCCACAGACCAA +
Preference number: 4 (lower is better)
Translates to: EELNHLMSKSLAFWNCIKNGTQA*PVSTDQ
Trigger: TTGGTCTGTGGACACAGGCCAAGCTTGAGTCCCATT...CTTGATGCAGTTCCAAAATGCCAAGCTTTTACTCATCAGATGGTTCAATTCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CCA 90 bp TCCTTAAAGTCTGTTCGCTGTTTAAACACTGAAGCAAGTAGACGTAAAGAGTCAGAAGAGCTGCGGTTCTaGCCTGCTGTTGCAACAGAT +
Preference number: 4 (lower is better)
Translates to: SLKSVRCLNTEASRRKESEELRF*PAVATD
Trigger: ATCTGTTGCAACAGCAGGCCAGAACCGCAGCTCTTC...TGACTCTTTACGTCTACTTGCTTCAGTGTTTAAACAGCGAACAGACTTTAAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CCA 90 bp CTAACCCAGTTGACTTCACAGAGTACAGACCCCAAAAATAAGAAACAGCTCTTGCAAAATATCCTCATCTaGTTCAAGGCCCCAGGCAGT +
Preference number: 4 (lower is better)
Translates to: LTQLTSQSTDPKNKKQLLQNILI*FKAPGS
Trigger: ACTGCCTGGGGCCTTGAACCAGATGAGGATATTTTG...CAAGAGCTGTTTCTTATTTTTGGGGTCTGTACTCTGTGAAGTCAACTGGGTTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CCA 90 bp CTTTCATTTCATTCCTTAAAGTCTGTTCGCTGTTTAAACACTGAAGCAAGTAGACTGCGGGTTTCTGGGTaGGGACTGGAATTCCAGGCA +
Preference number: 4 (lower is better)
Translates to: LSFHSLKSVRCLNTEASRLRVSG*GLEFQA
Trigger: TGCCTGGAATTCCAGTCCCCACCCAGAAACCCGCAG...TCTACTTGCTTCAGTGTTTAAACAGCGAACAGACTTTAAGGAATGAAATGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CCA 90 bp AATTTCAGTAGATCTCCCGACCTGACCCAGTTTCCACAGACAAGTGTTTCAGCAAAGGAACTCTGCTGTTaGAATAGTCGCGTTGTTCAT +
Preference number: 4 (lower is better)
Translates to: NFSRSPDLTQFPQTSVSAKELCC*NSRVVH
Trigger: ATGAACAACGCGACTATTCCAACAGCAGAGTTCCTT...TGCTGAAACACTTGTCTGTGGAAACTGGGTCAGGTCGGGAGATCTACTGAAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CCA 90 bp GCTGTTGGAATAGTCGCGTTGTTCATCATCATCAGGACTTCCATAAAGAGGCTGAAGGAACTCTGCTGTTaGAATAGTCGCGTTGTTCAT +
Preference number: 4 (lower is better)
Translates to: AVGIVALFIIIRTSIKRLKELCC*NSRVVH
Trigger: ATGAACAACGCGACTATTCCAACAGCAGAGTTCCTT...CAGCCTCTTTATGGAAGTCCTGATGATGATGAACAACGCGACTATTCCAACAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CCA 90 bp ATGTCTGAACTAGCTCAGTGTCTTTATAGCACGTTCCTAGCCCAGAGTTTCCCAGCTTACTTGATGCCATaGATTCAAGAGCATTCAGAG +
Preference number: 4 (lower is better)
Translates to: MSELAQCLYSTFLAQSFPAYLMP*IQEHSE
Trigger: CTCTGAATGCTCTTGAATCCATGGCATCAAGTAAGC...TGGGAAACTCTGGGCTAGGAACGTGCTATAAAGACACTGAGCTAGTTCAGACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CCA 90 bp ACAGATCCCTCTGAGACGGACATTTTGTGGCCTGTAAAACTCAAGAGACTAAACGGCTCTGCACCCAAGTaGAACTTAGTAAGTTTCTCT +
Preference number: 4 (lower is better)
Translates to: TDPSETDILWPVKLKRLNGSAPK*NLVSFS
Trigger: AGAGAAACTTACTAAGTTCCACTTGGGTGCAGAGCC...GTTTAGTCTCTTGAGTTTTACAGGCCACAAAATGTCCGTCTCAGAGGGATCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CCA 90 bp AATTTCAGTAGATCTCCCGACCTGACCCAGTTTCCACAGACAAGTGTTTCAGCAACAAAGAACTCCATCTaGAGGTCTTGTGAGATGACT +
Preference number: 4 (lower is better)
Translates to: NFSRSPDLTQFPQTSVSATKNSI*RSCEMT
Trigger: AGTCATCTCACAAGACCTCCAGATGGAGTTCTTTGT...TGCTGAAACACTTGTCTGTGGAAACTGGGTCAGGTCGGGAGATCTACTGAAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CCA 90 bp CATTCGGCAACTGTGAGTGGCTCTGCACCCAAGTGGAACTTAGTAAGTTTCTCTTTCAGATATCGAACATaGTGTCTATCAAAGGGTGCA +
Preference number: 4 (lower is better)
Translates to: HSATVSGSAPKWNLVSFSFRYRT*CLSKGA
Trigger: TGCACCCTTTGATAGACACCATGTTCGATATCTGAA...AGAGAAACTTACTAAGTTCCACTTGGGTGCAGAGCCACTCACAGTTGCCGAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CCA 90 bp AATTTCAGTAGATCTCCCGACCTGACCCAGTTTCCACAGACAAGTGTTTCAGCATTTCAGCAGGTCCATTaGCTTCATCTGAGTTTGAAG +
Preference number: 4 (lower is better)
Translates to: NFSRSPDLTQFPQTSVSAFQQVH*LHLSLK
Trigger: CTTCAAACTCAGATGAAGCCAATGGACCTGCTGAAA...TGCTGAAACACTTGTCTGTGGAAACTGGGTCAGGTCGGGAGATCTACTGAAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CCA 90 bp ATGTCTGAACTAGCTCAGTGTCTTTATAGCACGTTCCTAGCCCAGAGTTTCCCATTAGACATCTTTATTTaGTCCCGATGCCACTGTTGG +
Preference number: 4 (lower is better)
Translates to: MSELAQCLYSTFLAQSFPLDIFI*SRCHCW
Trigger: CCAACAGTGGCATCGGGACCAAATAAAGATGTCTAA...TGGGAAACTCTGGGCTAGGAACGTGCTATAAAGACACTGAGCTAGTTCAGACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CCA 90 bp GTCCCGAATCCACTGCTACTGTCATGCTATGTAGACAGTTGTGTAGACACATCTTCTATTAATAGGCAGTaGGACAACATGATTCCGGGA +
Preference number: 4 (lower is better)
Translates to: VPNPLLLSCYVDSCVDTSSINRQ*DNMIPG
Trigger: TCCCGGAATCATGTTGTCCCACTGCCTATTAATAGA...AGATGTGTCTACACAACTGTCTACATAGCATGACAGTAGCAGTGGATTCGGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CCA 90 bp ACAGATCCCTCTGAGACGGACATTTTGTGGCCTGTAAAACTCAAGAGACTAAACAATGAGCTGTACAGTTaGCCCAAAATGAAGAGCAGG +
Preference number: 4 (lower is better)
Translates to: TDPSETDILWPVKLKRLNNELYS*PKMKSR
Trigger: CCTGCTCTTCATTTTGGGCCAACTGTACAGCTCATT...GTTTAGTCTCTTGAGTTTTACAGGCCACAAAATGTCCGTCTCAGAGGGATCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CCA 90 bp GTAGGAATAGAAAGGCCCGCAGACACTTTTAGGAGCTTCATGATTAATTCAGCAATAAGAAACAGCTCTTaGGGCTTCCTCGTTCCACCT +
Preference number: 4 (lower is better)
Translates to: VGIERPADTFRSFMINSAIRNSS*GFLVPP
Trigger: AGGTGGAACGAGGAAGCCCCAAGAGCTGTTTCTTAT...TGCTGAATTAATCATGAAGCTCCTAAAAGTGTCTGCGGGCCTTTCTATTCCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590884.5
3UTR CAA 72 bp TTCTCCATGAGGATACACGGCTGGATGGAAATTGACTaGTCATCATCTCTACTGCCCACTATAATCACGATC +
Preference number: 4 (lower is better)
Translates to: FSMRIHGWMEID*SSSLLPTIITI
Trigger: GATCGTGATTATAGTGGGCAGTAGAGATGATGACAAGTCAATTTCCATCCAGCCGTGTATCCTCATGGAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR CAA 72 bp AGAAAAGCTGAGACAGATCCCTCTGAGACGGACATTTaGTGGCCTGTAAAACTCAAGAGACTAAACAGGGAT +
Preference number: 4 (lower is better)
Translates to: RKAETDPSETDI*WPVKLKRLNRD
Trigger: ATCCCTGTTTAGTCTCTTGAGTTTTACAGGCCACAAAATGTCCGTCTCAGAGGGATCTGTCTCAGCTTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR CAA 72 bp CTGGAATTCCAGGCATCAGAGAGCACACTAACCCAGTaGACTTCACAGAGTACAGACCCCAAAAATAAGAAA +
Preference number: 4 (lower is better)
Translates to: LEFQASESTLTQ*TSQSTDPKNKK
Trigger: TTTCTTATTTTTGGGGTCTGTACTCTGTGAAGTCAACTGGGTTAGTGTGCTCTCTGATGCCTGGAATTCCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR TCA 90 bp TCACCTTCATTTGAAAGGAACGAGGACATGAACACTCTTGGCTTGTATGACATGGAAATTATCTCAGGGTaGACAGCTGTGATAGTCCCT +
Preference number: 4 (lower is better)
Translates to: SPSFERNEDMNTLGLYDMEIISG*TAVIVP
Trigger: AGGGACTATCACAGCTGTTCACCCTGAGATAATTTC...CATGTCATACAAGCCAAGAGTGTTCATGTCCTCGTTCCTTTCAAATGAAGGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR TCA 90 bp TCGGGCGGGTTAAAGACAATGATATCGTCTAAGAGCTTAGACATTTCCTGTTCTTCTTCCTGCATCAGCTaGAAAGCTGCTTTACACAAG +
Preference number: 4 (lower is better)
Translates to: SGGLKTMISSKSLDISCSSSCIS*KAALHK
Trigger: CTTGTGTAAAGCAGCTTTTCAGCTGATGCAGGAAGA...AGAACAGGAAATGTCTAAGCTCTTAGACGATATCATTGTCTTTAACCCGCCCGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR TCA 90 bp CTTTCATTTCATTCCTTAAAGTCTGTTCGCTGTTTAAACACTGAAGCAAGTAGACTTCAAACTGAACCGTaGCAACTGCGGCTCCTTGGC +
Preference number: 4 (lower is better)
Translates to: LSFHSLKSVRCLNTEASRLQTEP*QLRLLG
Trigger: GCCAAGGAGCCGCAGTTGTCACGGTTCAGTTTGAAG...TCTACTTGCTTCAGTGTTTAAACAGCGAACAGACTTTAAGGAATGAAATGAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR TCA 90 bp ATGTCTGAACTAGCTCAGTGTCTTTATAGCACGTTCCTAGCCCAGAGTTTCCCATTCCACAATATTAAGTaGTGGTGGTTTAGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: MSELAQCLYSTFLAQSFPFHNIK*WWFSSF
Trigger: GAAGCTGCTAAACCACCATCACTTAATATTGTGGAA...TGGGAAACTCTGGGCTAGGAACGTGCTATAAAGACACTGAGCTAGTTCAGACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR TCA 90 bp GTCCCGAATCCACTGCTACTGTCATGCTATGTAGACAGTTGTGTAGACACATCTCATGGCTTAAAGAGCTaGATGATTACTGAATGTAGG +
Preference number: 4 (lower is better)
Translates to: VPNPLLLSCYVDSCVDTSHGLKS*MITECR
Trigger: CCTACATTCAGTAATCATTCAGCTCTTTAAGCCATG...AGATGTGTCTACACAACTGTCTACATAGCATGACAGTAGCAGTGGATTCGGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR TCA 90 bp TGCATCAAGATGCTTCTGGCTGTCAGTAGGAATAGAAAGGCCCGCAGACACTTTCCAATAAAATCATCATaGAAAGGAGGCAGACAATCA +
Preference number: 4 (lower is better)
Translates to: CIKMLLAVSRNRKARRHFPIKSS*KGGRQS
Trigger: TGATTGTCTGCCTCCTTTTCATGATGATTTTATTGG...AAAGTGTCTGCGGGCCTTTCTATTCCTACTGACAGCCAGAAGCATCTTGATGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR TCA 90 bp AATTTCAGTAGATCTCCCGACCTGACCCAGTTTCCACAGACAAGTGTTTCAGCAAGGAAGCGCTTTCACTaGCCATCTCTGATTATTAAT +
Preference number: 4 (lower is better)
Translates to: NFSRSPDLTQFPQTSVSARKRFH*PSLIIN
Trigger: ATTAATAATCAGAGATGGTCAGTGAAAGCGCTTCCT...TGCTGAAACACTTGTCTGTGGAAACTGGGTCAGGTCGGGAGATCTACTGAAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR TCA 90 bp TCACCTTCATTTGAAAGGAACGAGGACATGAACACTCTTGGCTTGTATGACATGAAAGGAACGAGGACATaGACACTCTTGGCTTGTATG +
Preference number: 4 (lower is better)
Translates to: SPSFERNEDMNTLGLYDMKGTRT*TLLACM
Trigger: CATACAAGCCAAGAGTGTTCATGTCCTCGTTCCTTT...CATGTCATACAAGCCAAGAGTGTTCATGTCCTCGTTCCTTTCAAATGAAGGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR TCA 90 bp GTCCCGAATCCACTGCTACTGTCATGCTATGTAGACAGTTGTGTAGACACATCTGGGAAGAAAACGAGTTaGACACACTTAAGTATGTGT +
Preference number: 4 (lower is better)
Translates to: VPNPLLLSCYVDSCVDTSGKKTS*THLSMC
Trigger: ACACATACTTAAGTGTGTTCAACTCGTTTTCTTCCC...AGATGTGTCTACACAACTGTCTACATAGCATGACAGTAGCAGTGGATTCGGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR GCA 90 bp ATGTCTGAACTAGCTCAGTGTCTTTATAGCACGTTCCTAGCCCAGAGTTTCCCAAACTTTCACTTGATCTaGACAGATACCCTGTACAGA +
Preference number: 4 (lower is better)
Translates to: MSELAQCLYSTFLAQSFPNFHLI*TDTLYR
Trigger: TCTGTACAGGGTATCTGTGCAGATCAAGTGAAAGTT...TGGGAAACTCTGGGCTAGGAACGTGCTATAAAGACACTGAGCTAGTTCAGACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR GCA 90 bp ACAGATCCCTCTGAGACGGACATTTTGTGGCCTGTAAAACTCAAGAGACTAAACTCAGATGCAGAAGGTTaGCAAAGATACAAAGGCAGT +
Preference number: 4 (lower is better)
Translates to: TDPSETDILWPVKLKRLNSDAEG*QRYKGS
Trigger: ACTGCCTTTGTATCTTTGGCAACCTTCTGCATCTGA...GTTTAGTCTCTTGAGTTTTACAGGCCACAAAATGTCCGTCTCAGAGGGATCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR GCA 90 bp TGCTGTACATGCTTCACAATAATGCATCAGGTGCAACCAAAGGGCTCCTGCATCGAAACTCATGATAGATaGGCTCCATGTTCAAATACT +
Preference number: 4 (lower is better)
Translates to: CCTCFTIMHQVQPKGSCIETHDR*APCSNT
Trigger: AGTATTTGAACATGGAGCGCATCTATCATGAGTTTC...GATGCAGGAGCCCTTTGGTTGCACCTGATGCATTATTGTGAAGCATGTACAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000592272.5
CDS-3UTR GCA 90 bp ATGTCTGAACTAGCTCAGTGTCTTTATAGCACGTTCCTAGCCCAGAGTTTCCCAAGAAACTTCACCACTTaGTCATACAGCTGTATGAAC +
Preference number: 4 (lower is better)
Translates to: MSELAQCLYSTFLAQSFPRNFTT*SYSCMN
Trigger: GTTCATACAGCTGTATGAGCAAGTGGTGAAGTTTCT...TGGGAAACTCTGGGCTAGGAACGTGCTATAAAGACACTGAGCTAGTTCAGACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR GCA 90 bp ACAGATCCCTCTGAGACGGACATTTTGTGGCCTGTAAAACTCAAGAGACTAAACATAGTCTCCATTACCTaGTTGTCTGACAAGAGAGCA +
Preference number: 4 (lower is better)
Translates to: TDPSETDILWPVKLKRLNIVSIT*LSDKRA
Trigger: TGCTCTCTTGTCAGACAAGCAGGTAATGGAGACTAT...GTTTAGTCTCTTGAGTTTTACAGGCCACAAAATGTCCGTCTCAGAGGGATCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR GCA 90 bp AATTTCAGTAGATCTCCCGACCTGACCCAGTTTCCACAGACAAGTGTTTCAGCATTTGGGTGCTGTACATaGTTCACAATAATGCATCAG +
Preference number: 4 (lower is better)
Translates to: NFSRSPDLTQFPQTSVSAFGCCT*FTIMHQ
Trigger: CTGATGCATTATTGTGAAGCATGTACAGCACCCAAA...TGCTGAAACACTTGTCTGTGGAAACTGGGTCAGGTCGGGAGATCTACTGAAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR GCA 90 bp TCACCTTCATTTGAAAGGAACGAGGACATGAACACTCTTGGCTTGTATGACATGAAATATCTAAAGGTCTaGCTCAAGGAGGGGCAAGTG +
Preference number: 4 (lower is better)
Translates to: SPSFERNEDMNTLGLYDMKYLKV*LKEGQV
Trigger: CACTTGCCCCTCCTTGAGGCAGACCTTTAGATATTT...CATGTCATACAAGCCAAGAGTGTTCATGTCCTCGTTCCTTTCAAATGAAGGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CCA 90 bp ATGTCTGAACTAGCTCAGTGTCTTTATAGCACGTTCCTAGCCCAGAGTTTCCCACTCAAATGTCTTGACTaGACCAGAATTCCCAATAGT +
Preference number: 4 (lower is better)
Translates to: MSELAQCLYSTFLAQSFPLKCLD*TRIPNS
Trigger: ACTATTGGGAATTCTGGTCCAGTCAAGACATTTGAG...TGGGAAACTCTGGGCTAGGAACGTGCTATAAAGACACTGAGCTAGTTCAGACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CCA 90 bp CTTTCATTTCATTCCTTAAAGTCTGTTCGCTGTTTAAACACTGAAGCAAGTAGACTGCAGGGTGTGGAATaGGACTCAAGCTTGGCCTGT +
Preference number: 4 (lower is better)
Translates to: LSFHSLKSVRCLNTEASRLQGVE*DSSLAC
Trigger: ACAGGCCAAGCTTGAGTCCCATTCCACACCCTGCAG...TCTACTTGCTTCAGTGTTTAAACAGCGAACAGACTTTAAGGAATGAAATGAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CCA 90 bp TTTTGGGTGCTGTACATGCTTCACAATAATGCATCAGGTGCAACCAAAGGGCTCACTCCAAATGTAGTGTaGTCTGTTCTTCACGATTCA +
Preference number: 4 (lower is better)
Translates to: FWVLYMLHNNASGATKGLTPNVV*SVLHDS
Trigger: TGAATCGTGAAGAACAGACCACACTACATTTGGAGT...GAGCCCTTTGGTTGCACCTGATGCATTATTGTGAAGCATGTACAGCACCCAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000592272.5
CDS-3UTR CCA 90 bp GAATTGAACCATCTGATGAGTAAAAGCTTGGCATTTTGGAACTGCATCAAGATGCTGGCAGTTGGGTCTTaGGCCAAACAGGTCATTTCT +
Preference number: 4 (lower is better)
Translates to: ELNHLMSKSLAFWNCIKMLAVGS*AKQVIS
Trigger: AGAAATGACCTGTTTGGCCCAAGACCCAACTGCCAG...CATCTTGATGCAGTTCCAAAATGCCAAGCTTTTACTCATCAGATGGTTCAATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CCA 90 bp TGCTGGCAGTTGGGTCTTGGGCCAAACAGGTCATTTCTAAGTCAATCAGCCTTTAAAAGCTTGGCATTTTaGAACTGCATCAAGATGCTT +
Preference number: 4 (lower is better)
Translates to: CWQLGLGPNRSFLSQSAFKSLAF*NCIKML
Trigger: AAGCATCTTGATGCAGTTCCAAAATGCCAAGCTTTT...AAAGGCTGATTGACTTAGAAATGACCTGTTTGGCCCAAGACCCAACTGCCAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000590884.5
CDS-3UTR CCA 90 bp TTCTGGCTGTCAGTAGGAATAGAAAGGCCCGCAGACACTTTTAGGAGCTTCATGAAAAGCTTGGCATTTTaGAACTGCATCAAGATGCTT +
Preference number: 4 (lower is better)
Translates to: FWLSVGIERPADTFRSFMKSLAF*NCIKML
Trigger: AAGCATCTTGATGCAGTTCCAAAATGCCAAGCTTTT...CATGAAGCTCCTAAAAGTGTCTGCGGGCCTTTCTATTCCTACTGACAGCCAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CCA 90 bp CATTCGGCAACTGTGAGTGGCTCTGCACCCAAGTGGAACTTAGTAAGTTTCTCTCAAATAATGCACTTCTaGATACAGACAGTTAACGAG +
Preference number: 4 (lower is better)
Translates to: HSATVSGSAPKWNLVSFSQIMHF*IQTVNE
Trigger: CTCGTTAACTGTCTGTATCCAGAAGTGCATTATTTG...AGAGAAACTTACTAAGTTCCACTTGGGTGCAGAGCCACTCACAGTTGCCGAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CCA 90 bp CACCTGCAAGCAAGCACCAACTTAAATGTATGCCCCAGGTGCCTCATTTGTCTCATAATCACGATCAAGTaGTCGTATTTTACACATGAC +
Preference number: 4 (lower is better)
Translates to: HLQASTNLNVCPRCLICLIITIK*SYFTHD
Trigger: GTCATGTGTAAAATACGACCACTTGATCGTGATTAT...GAGACAAATGAGGCACCTGGGGCATACATTTAAGTTGGTGCTTGCTTGCAGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CCA 90 bp ACAGATCCCTCTGAGACGGACATTTTGTGGCCTGTAAAACTCAAGAGACTAAACGGATACACGGCTGGATaGAAATTGACTTGTCATCAT +
Preference number: 4 (lower is better)
Translates to: TDPSETDILWPVKLKRLNGYTAG*KLTCHH
Trigger: ATGATGACAAGTCAATTTCCATCCAGCCGTGTATCC...GTTTAGTCTCTTGAGTTTTACAGGCCACAAAATGTCCGTCTCAGAGGGATCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CCA 90 bp CATTCGGCAACTGTGAGTGGCTCTGCACCCAAGTGGAACTTAGTAAGTTTCTCTGAAAGGAAGTTAGGCTaGTCTATGGGTTTTCATTTT +
Preference number: 4 (lower is better)
Translates to: HSATVSGSAPKWNLVSFSERKLG*SMGFHF
Trigger: AAAATGAAAACCCATAGACCAGCCTAACTTCCTTTC...AGAGAAACTTACTAAGTTCCACTTGGGTGCAGAGCCACTCACAGTTGCCGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CCA 90 bp ATGTCTGAACTAGCTCAGTGTCTTTATAGCACGTTCCTAGCCCAGAGTTTCCCAGTCACACTAGATATGTaGGAAGAAAACGAGTTGAAC +
Preference number: 4 (lower is better)
Translates to: MSELAQCLYSTFLAQSFPVTLDM*EENELN
Trigger: GTTCAACTCGTTTTCTTCCCACATATCTAGTGTGAC...TGGGAAACTCTGGGCTAGGAACGTGCTATAAAGACACTGAGCTAGTTCAGACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR TCA 90 bp ATGTCTGAACTAGCTCAGTGTCTTTATAGCACGTTCCTAGCCCAGAGTTTCCCAAATACTGGCCAAATATaGAACCTGCTTCATACTTTC +
Preference number: 4 (lower is better)
Translates to: MSELAQCLYSTFLAQSFPNTGQI*NLLHTF
Trigger: GAAAGTATGAAGCAGGTTTCATATTTGGCCAGTATT...TGGGAAACTCTGGGCTAGGAACGTGCTATAAAGACACTGAGCTAGTTCAGACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR TCA 90 bp GAATTGAACCATCTGATGAGTAAAAGCTTGGCATTTTGGAACTGCATCAAGATGGGAAAGCGTACAGAATaGACTCTGGCATTTTGGGTG +
Preference number: 4 (lower is better)
Translates to: ELNHLMSKSLAFWNCIKMGKRTE*TLAFWV
Trigger: CACCCAAAATGCCAGAGTTCATTCTGTACGCTTTCC...CATCTTGATGCAGTTCCAAAATGCCAAGCTTTTACTCATCAGATGGTTCAATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000592272.5
CDS-3UTR TCA 90 bp GTCCCGAATCCACTGCTACTGTCATGCTATGTAGACAGTTGTGTAGACACATCTCCAATAAAATCATCATaGAAAGGAGGCAGACAATCA +
Preference number: 4 (lower is better)
Translates to: VPNPLLLSCYVDSCVDTSPIKSS*KGGRQS
Trigger: TGATTGTCTGCCTCCTTTTCATGATGATTTTATTGG...AGATGTGTCTACACAACTGTCTACATAGCATGACAGTAGCAGTGGATTCGGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR TCA 90 bp GCTGTTGGAATAGTCGCGTTGTTCATCATCATCAGGACTTCCATAAAGAGGCTGCCAATAAAATCATCATaGAAAGGAGGCAGACAATCA +
Preference number: 4 (lower is better)
Translates to: AVGIVALFIIIRTSIKRLPIKSS*KGGRQS
Trigger: TGATTGTCTGCCTCCTTTTCATGATGATTTTATTGG...CAGCCTCTTTATGGAAGTCCTGATGATGATGAACAACGCGACTATTCCAACAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR TCA 90 bp ACAGATCCCTCTGAGACGGACATTTTGTGGCCTGTAAAACTCAAGAGACTAAACGTTTGGTCTACCAGTTaGACTTCCTTTGCCAATAAA +
Preference number: 4 (lower is better)
Translates to: TDPSETDILWPVKLKRLNVWSTS*TSFANK
Trigger: TTTATTGGCAAAGGAAGTTCAACTGGTAGACCAAAC...GTTTAGTCTCTTGAGTTTTACAGGCCACAAAATGTCCGTCTCAGAGGGATCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR TCA 90 bp GTCCCGAATCCACTGCTACTGTCATGCTATGTAGACAGTTGTGTAGACACATCTTATATCACCTTCATTTaGAAGGAACGAGGACATGAA +
Preference number: 4 (lower is better)
Translates to: VPNPLLLSCYVDSCVDTSYITFI*KERGHE
Trigger: TTCATGTCCTCGTTCCTTTCAAATGAAGGTGATATA...AGATGTGTCTACACAACTGTCTACATAGCATGACAGTAGCAGTGGATTCGGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR TCA 90 bp TCACCTTCATTTGAAAGGAACGAGGACATGAACACTCTTGGCTTGTATGACATGCAACTGATATTAAGCTaGGGTCTGCAGTCTCAACTT +
Preference number: 4 (lower is better)
Translates to: SPSFERNEDMNTLGLYDMQLILS*GLQSQL
Trigger: AAGTTGAGACTGCAGACCTCAGCTTAATATCAGTTG...CATGTCATACAAGCCAAGAGTGTTCATGTCCTCGTTCCTTTCAAATGAAGGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR GCA 90 bp AATTTCAGTAGATCTCCCGACCTGACCCAGTTTCCACAGACAAGTGTTTCAGCAGCCAAATATGAAACCTaGTTCATACTTTCAGAGAGA +
Preference number: 4 (lower is better)
Translates to: NFSRSPDLTQFPQTSVSAAKYET*FILSER
Trigger: TCTCTCTGAAAGTATGAAGCAGGTTTCATATTTGGC...TGCTGAAACACTTGTCTGTGGAAACTGGGTCAGGTCGGGAGATCTACTGAAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR GCA 90 bp GAGGAATTGAACCATCTGATGAGTAAAAGCTTGGCATTTTGGAACTGCATCAAGCTTCATTGGGCTGAGTaGTTACAGATATGTGTGCCT +
Preference number: 4 (lower is better)
Translates to: EELNHLMSKSLAFWNCIKLHWAE*LQICVP
Trigger: AGGCACACATATCTGTAAGCACTCAGCCCAATGAAG...CTTGATGCAGTTCCAAAATGCCAAGCTTTTACTCATCAGATGGTTCAATTCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR GCA 90 bp GAATTGAACCATCTGATGAGTAAAAGCTTGGCATTTTGGAACTGCATCAAGATGAGGAGTGATGTTGCCTaGCACAATCCAGCTTACCAA +
Preference number: 4 (lower is better)
Translates to: ELNHLMSKSLAFWNCIKMRSDVA*HNPAYQ
Trigger: TTGGTAAGCTGGATTGTGGCAGGCAACATCACTCCT...CATCTTGATGCAGTTCCAAAATGCCAAGCTTTTACTCATCAGATGGTTCAATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR GCA 90 bp AGCACACTCTGGTACGACACAATATCCACAAGATGCCATGAAAGTGAGCTTGTCGAAACTCATGATAGATaGGCTCCATGTTCAAATACT +
Preference number: 4 (lower is better)
Translates to: STLWYDTISTRCHESELVETHDR*APCSNT
Trigger: AGTATTTGAACATGGAGCGCATCTATCATGAGTTTC...GACAAGCTCACTTTCATGGCATCTTGTGGATATTGTGTCGTACCAGAGTGTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR GCA 90 bp GAGGAATTGAACCATCTGATGAGTAAAAGCTTGGCATTTTGGAACTGCATCAAGATTTCTTACCGCTGCTaGCTCTGCACTCCAAATGTA +
Preference number: 4 (lower is better)
Translates to: EELNHLMSKSLAFWNCIKISYRC*LCTPNV
Trigger: TACATTTGGAGTGCAGAGGCAGCAGCGGTAAGAAAT...CTTGATGCAGTTCCAAAATGCCAAGCTTTTACTCATCAGATGGTTCAATTCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR GCA 90 bp AATACTCCATCCACAGATCTGGAGATAAAATATACACATGATGTGAAAGTAGGATGCTCCGCGGAGCTTTaGATAAGCAGCCTGAGAATG +
Preference number: 4 (lower is better)
Translates to: NTPSTDLEIKYTHDVKVGCSAEL*ISSLRM
Trigger: CATTCTCAGGCTGCTTATGCAAAGCTCCGCGGAGCA...TCCTACTTTCACATCATGTGTATATTTTATCTCCAGATCTGTGGATGGAGTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587884.1
CDS-3UTR GCA 90 bp CTTTCATTTCATTCCTTAAAGTCTGTTCGCTGTTTAAACACTGAAGCAAGTAGACAGTCAGTGAACAGCTaGACAATGCTTGAGGCCACC +
Preference number: 4 (lower is better)
Translates to: LSFHSLKSVRCLNTEASRQSVNS*TMLEAT
Trigger: GGTGGCCTCAAGCATTGTGCAGCTGTTCACTGACTG...TCTACTTGCTTCAGTGTTTAAACAGCGAACAGACTTTAAGGAATGAAATGAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587884.1
CDS-3UTR GCA 90 bp CTAACCCAGTTGACTTCACAGAGTACAGACCCCAAAAATAAGAAACAGCTCTTGTTGGCATTTTGGAACTaGATCAAGATGCTTCTGGCT +
Preference number: 4 (lower is better)
Translates to: LTQLTSQSTDPKNKKQLLLAFWN*IKMLLA
Trigger: AGCCAGAAGCATCTTGATGCAGTTCCAAAATGCCAA...CAAGAGCTGTTTCTTATTTTTGGGGTCTGTACTCTGTGAAGTCAACTGGGTTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR GCA 90 bp AATTTCAGTAGATCTCCCGACCTGACCCAGTTTCCACAGACAAGTGTTTCAGCAATATTAAGCCAGCTATaGAGGCAAAATCCATCTAGA +
Preference number: 4 (lower is better)
Translates to: NFSRSPDLTQFPQTSVSAILSQL*RQNPSR
Trigger: TCTAGATGGATTTTGCCTGCATAGCTGGCTTAATAT...TGCTGAAACACTTGTCTGTGGAAACTGGGTCAGGTCGGGAGATCTACTGAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR GCA 90 bp ACAGATCCCTCTGAGACGGACATTTTGTGGCCTGTAAAACTCAAGAGACTAAACTGTGTTCCAGCATTCTaGCCTTCACTTGTTCTATTA +
Preference number: 4 (lower is better)
Translates to: TDPSETDILWPVKLKRLNCVPAF*PSLVLL
Trigger: TAATAGAACAAGTGAAGGGCAGAATGCTGGAACACA...GTTTAGTCTCTTGAGTTTTACAGGCCACAAAATGTCCGTCTCAGAGGGATCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CCA 90 bp GTCCCGAATCCACTGCTACTGTCATGCTATGTAGACAGTTGTGTAGACACATCTCATATCGAACAATACTaGCCAAATATGAAACCTGCT +
Preference number: 4 (lower is better)
Translates to: VPNPLLLSCYVDSCVDTSHIEQY*PNMKPA
Trigger: AGCAGGTTTCATATTTGGCCAGTATTGTTCGATATG...AGATGTGTCTACACAACTGTCTACATAGCATGACAGTAGCAGTGGATTCGGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CCA 90 bp GAATTGAACCATCTGATGAGTAAAAGCTTGGCATTTTGGAACTGCATCAAGATGATAACTCTCCGGAGCTaGGAGTCCTCTTCAAAGATG +
Preference number: 4 (lower is better)
Translates to: ELNHLMSKSLAFWNCIKMITLRS*ESSSKM
Trigger: CATCTTTGAAGAGGACTCCCAGCTCCGGAGAGTTAT...CATCTTGATGCAGTTCCAAAATGCCAAGCTTTTACTCATCAGATGGTTCAATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CCA 90 bp TCACCTTCATTTGAAAGGAACGAGGACATGAACACTCTTGGCTTGTATGACATGGTACAGAATGAACTCTaGCATTTTGGGTGCTGTACA +
Preference number: 4 (lower is better)
Translates to: SPSFERNEDMNTLGLYDMVQNEL*HFGCCT
Trigger: TGTACAGCACCCAAAATGCCAGAGTTCATTCTGTAC...CATGTCATACAAGCCAAGAGTGTTCATGTCCTCGTTCCTTTCAAATGAAGGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CCA 90 bp GAATTGAACCATCTGATGAGTAAAAGCTTGGCATTTTGGAACTGCATCAAGATGGAAGGGATACCAGAATaGGTCCCCATCCTGAATTCT +
Preference number: 4 (lower is better)
Translates to: ELNHLMSKSLAFWNCIKMEGIPE*VPILNS
Trigger: AGAATTCAGGATGGGGACCCATTCTGGTATCCCTTC...CATCTTGATGCAGTTCCAAAATGCCAAGCTTTTACTCATCAGATGGTTCAATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CCA 90 bp GTCCCGAATCCACTGCTACTGTCATGCTATGTAGACAGTTGTGTAGACACATCTCAAATAATGCACTTCTaGATACAGACAGTTAACGAG +
Preference number: 4 (lower is better)
Translates to: VPNPLLLSCYVDSCVDTSQIMHF*IQTVNE
Trigger: CTCGTTAACTGTCTGTATCCAGAAGTGCATTATTTG...AGATGTGTCTACACAACTGTCTACATAGCATGACAGTAGCAGTGGATTCGGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CCA 90 bp GTCCCGAATCCACTGCTACTGTCATGCTATGTAGACAGTTGTGTAGACACATCTAAACATAAACAGCAATaGGTTTTTCAAGAGCCTCAG +
Preference number: 4 (lower is better)
Translates to: VPNPLLLSCYVDSCVDTSKHKQQ*VFQEPQ
Trigger: CTGAGGCTCTTGAAAAACCCATTGCTGTTTATGTTT...AGATGTGTCTACACAACTGTCTACATAGCATGACAGTAGCAGTGGATTCGGGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CCA 90 bp GTCCCGAATCCACTGCTACTGTCATGCTATGTAGACAGTTGTGTAGACACATCTTTGGAGGAACACAAATaGGGTTTAAAAGTAAGGGTA +
Preference number: 4 (lower is better)
Translates to: VPNPLLLSCYVDSCVDTSLEEHK*GLKVRV
Trigger: TACCCTTACTTTTAAACCCCATTTGTGTTCCTCCAA...AGATGTGTCTACACAACTGTCTACATAGCATGACAGTAGCAGTGGATTCGGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CCA 90 bp TCACCTTCATTTGAAAGGAACGAGGACATGAACACTCTTGGCTTGTATGACATGATGAGGATACACGGCTaGATGGAAATTGACTTGTCA +
Preference number: 4 (lower is better)
Translates to: SPSFERNEDMNTLGLYDMMRIHG*MEIDLS
Trigger: TGACAAGTCAATTTCCATCCAGCCGTGTATCCTCAT...CATGTCATACAAGCCAAGAGTGTTCATGTCCTCGTTCCTTTCAAATGAAGGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CCA 90 bp CATTCGGCAACTGTGAGTGGCTCTGCACCCAAGTGGAACTTAGTAAGTTTCTCTAACGTAGAAACATCTTaGTTCAATAGAAAGCAGAAC +
Preference number: 4 (lower is better)
Translates to: HSATVSGSAPKWNLVSFSNVETS*FNRKQN
Trigger: GTTCTGCTTTCTATTGAACCAAGATGTTTCTACGTT...AGAGAAACTTACTAAGTTCCACTTGGGTGCAGAGCCACTCACAGTTGCCGAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR TCA 90 bp ACAGATCCCTCTGAGACGGACATTTTGTGGCCTGTAAAACTCAAGAGACTAAACATTTTCATCATCTCTTaGGGTCTTGTTGTTTCAGGT +
Preference number: 4 (lower is better)
Translates to: TDPSETDILWPVKLKRLNIFIIS*GLVVSG
Trigger: ACCTGAAACAACAAGACCTCAAGAGATGATGAAAAT...GTTTAGTCTCTTGAGTTTTACAGGCCACAAAATGTCCGTCTCAGAGGGATCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR TCA 90 bp TCACCTTCATTTGAAAGGAACGAGGACATGAACACTCTTGGCTTGTATGACATGGTGGCTTGCAATATTTaGTCCTGGTATTCAACATAC +
Preference number: 4 (lower is better)
Translates to: SPSFERNEDMNTLGLYDMVACNI*SWYSTY
Trigger: GTATGTTGAATACCAGGATCAAATATTGCAAGCCAC...CATGTCATACAAGCCAAGAGTGTTCATGTCCTCGTTCCTTTCAAATGAAGGTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR TCA 90 bp CTTTCATTTCATTCCTTAAAGTCTGTTCGCTGTTTAAACACTGAAGCAAGTAGAGCAGTAAGTGCCAAGTaGATGGACTCCAGAAGCCTT +
Preference number: 4 (lower is better)
Translates to: LSFHSLKSVRCLNTEASRAVSAK*MDSRSL
Trigger: AAGGCTTCTGGAGTCCATTCACTTGGCACTTACTGC...TCTACTTGCTTCAGTGTTTAAACAGCGAACAGACTTTAAGGAATGAAATGAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590884.5
CDS-3UTR GCA 90 bp ATGTCTGAACTAGCTCAGTGTCTTTATAGCACGTTCCTAGCCCAGAGTTTCCCATGTCTTGATGAGCCATaGTGTCAAATTCTTCTAAAT +
Preference number: 4 (lower is better)
Translates to: MSELAQCLYSTFLAQSFPCLDEP*CQILLN
Trigger: ATTTAGAAGAATTTGACAGCATGGCTCATCAAGACA...TGGGAAACTCTGGGCTAGGAACGTGCTATAAAGACACTGAGCTAGTTCAGACAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR GCA 90 bp TCACCTTCATTTGAAAGGAACGAGGACATGAACACTCTTGGCTTGTATGACATGTCACGATTCACATACTaGTTTGGCATTGTGTCTAAC +
Preference number: 4 (lower is better)
Translates to: SPSFERNEDMNTLGLYDMSRFTY*FGIVSN
Trigger: GTTAGACACAATGCCAAAGCAGTATGTGAATCGTGA...CATGTCATACAAGCCAAGAGTGTTCATGTCCTCGTTCCTTTCAAATGAAGGTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR GCA 90 bp GCAGCACTTTCATTTCATTCCTTAAAGTCTGTTCGCTGTTTAAACACTGAAGCAGCTTCTGCTTGCAACTaGTTCACTTCCTTCCGTAAA +
Preference number: 4 (lower is better)
Translates to: AALSFHSLKSVRCLNTEAASACN*FTSFRK
Trigger: TTTACGGAAGGAAGTGAAGCAGTTGCAAGCAGAAGC...TGCTTCAGTGTTTAAACAGCGAACAGACTTTAAGGAATGAAATGAAAGTGCTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR GCA 90 bp TCGGGCGGGTTAAAGACAATGATATCGTCTAAGAGCTTAGACATTTCCTGTTCTAGAAACTTCACCACTTaGTCATACAGCTGTATGAAC +
Preference number: 4 (lower is better)
Translates to: SGGLKTMISSKSLDISCSRNFTT*SYSCMN
Trigger: GTTCATACAGCTGTATGAGCAAGTGGTGAAGTTTCT...AGAACAGGAAATGTCTAAGCTCTTAGACGATATCATTGTCTTTAACCCGCCCGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CCA 90 bp GAGGAATTGAACCATCTGATGAGTAAAAGCTTGGCATTTTGGAACTGCATCAAGGAAGCTGTTGGCTTATaGCTTCATTCTTATGCATGC +
Preference number: 4 (lower is better)
Translates to: EELNHLMSKSLAFWNCIKEAVGL*LHSYAC
Trigger: GCATGCATAAGAATGAAGCCATAAGCCAACAGCTTC...CTTGATGCAGTTCCAAAATGCCAAGCTTTTACTCATCAGATGGTTCAATTCCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CCA 90 bp ATGTCTGAACTAGCTCAGTGTCTTTATAGCACGTTCCTAGCCCAGAGTTTCCCAAACGTAGAAACATCTTaGTTCAATAGAAAGCAGAAC +
Preference number: 4 (lower is better)
Translates to: MSELAQCLYSTFLAQSFPNVETS*FNRKQN
Trigger: GTTCTGCTTTCTATTGAACCAAGATGTTTCTACGTT...TGGGAAACTCTGGGCTAGGAACGTGCTATAAAGACACTGAGCTAGTTCAGACAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR TCA 90 bp AATACTCCATCCACAGATCTGGAGATAAAATATACACATGATGTGAAAGTAGGACCCACTTCATTGGGCTaGGTGCTTACAGATATGTGT +
Preference number: 4 (lower is better)
Translates to: NTPSTDLEIKYTHDVKVGPTSLG*VLTDMC
Trigger: ACACATATCTGTAAGCACTCAGCCCAATGAAGTGGG...TCCTACTTTCACATCATGTGTATATTTTATCTCCAGATCTGTGGATGGAGTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587884.1
CDS-3UTR GCA 90 bp TCCTTAAAGTCTGTTCGCTGTTTAAACACTGAAGCAAGTAGACGTAAAGAGTCACATCAGCTGAAAAGCTaGTTTACACAAGTGGTCCAT +
Preference number: 4 (lower is better)
Translates to: SLKSVRCLNTEASRRKESHQLKS*FTQVVH
Trigger: ATGGACCACTTGTGTAAAGCAGCTTTTCAGCTGATG...TGACTCTTTACGTCTACTTGCTTCAGTGTTTAAACAGCGAACAGACTTTAAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR GCA 90 bp TCCTTAAAGTCTGTTCGCTGTTTAAACACTGAAGCAAGTAGACGTAAAGAGTCAATAGTCTCCATTACCTaGTTGTCTGACAAGAGAGCA +
Preference number: 4 (lower is better)
Translates to: SLKSVRCLNTEASRRKESIVSIT*LSDKRA
Trigger: TGCTCTCTTGTCAGACAAGCAGGTAATGGAGACTAT...TGACTCTTTACGTCTACTTGCTTCAGTGTTTAAACAGCGAACAGACTTTAAGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR GCA 90 bp CTTTCATTTCATTCCTTAAAGTCTGTTCGCTGTTTAAACACTGAAGCAAGTAGAGGAACTGCATCAAGATaGTTCTGGCTGTCAGTAGGA +
Preference number: 4 (lower is better)
Translates to: LSFHSLKSVRCLNTEASRGTASR*FWLSVG
Trigger: TCCTACTGACAGCCAGAAGCATCTTGATGCAGTTCC...TCTACTTGCTTCAGTGTTTAAACAGCGAACAGACTTTAAGGAATGAAATGAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR GCA 90 bp TCACCTTCATTTGAAAGGAACGAGGACATGAACACTCTTGGCTTGTATGACATGATATTAAGCCAGCTATaGAGGCAAAATCCATCTAGA +
Preference number: 4 (lower is better)
Translates to: SPSFERNEDMNTLGLYDMILSQL*RQNPSR
Trigger: TCTAGATGGATTTTGCCTGCATAGCTGGCTTAATAT...CATGTCATACAAGCCAAGAGTGTTCATGTCCTCGTTCCTTTCAAATGAAGGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CCA 90 bp CTTTCATTTCATTCCTTAAAGTCTGTTCGCTGTTTAAACACTGAAGCAAGTAGAATAACTCTCCGGAGCTaGGAGTCCTCTTCAAAGATG +
Preference number: 4 (lower is better)
Translates to: LSFHSLKSVRCLNTEASRITLRS*ESSSKM
Trigger: CATCTTTGAAGAGGACTCCCAGCTCCGGAGAGTTAT...TCTACTTGCTTCAGTGTTTAAACAGCGAACAGACTTTAAGGAATGAAATGAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CCA 90 bp GCAGCACTTTCATTTCATTCCTTAAAGTCTGTTCGCTGTTTAAACACTGAAGCAGAAGCTGTTGGCTTATaGCTTCATTCTTATGCATGC +
Preference number: 4 (lower is better)
Translates to: AALSFHSLKSVRCLNTEAEAVGL*LHSYAC
Trigger: GCATGCATAAGAATGAAGCCATAAGCCAACAGCTTC...TGCTTCAGTGTTTAAACAGCGAACAGACTTTAAGGAATGAAATGAAAGTGCTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CCA 90 bp ACAGATCCCTCTGAGACGGACATTTTGTGGCCTGTAAAACTCAAGAGACTAAACCAAGGTTGTCAGATCTaGAACATTTACATAAAACAG +
Preference number: 4 (lower is better)
Translates to: TDPSETDILWPVKLKRLNQGCQI*NIYIKQ
Trigger: CTGTTTTATGTAAATGTTCCAGATCTGACAACCTTG...GTTTAGTCTCTTGAGTTTTACAGGCCACAAAATGTCCGTCTCAGAGGGATCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
3UTR CAA 72 bp TCGAACTTGGTTAGCAGCATGAAAATCATATCACTGTaGTCCTCACTTAGAAACTTCACCACTTGCTCATAC +
Preference number: 4 (lower is better)
Translates to: SNLVSSMKIISL*SSLRNFTTCSY
Trigger: GTATGAGCAAGTGGTGAAGTTTCTAAGTGAGGACAACAGTGATATGATTTTCATGCTGCTAACCAAGTTCGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587884.1
CDS-3UTR TCA 90 bp GCAGCACTTTCATTTCATTCCTTAAAGTCTGTTCGCTGTTTAAACACTGAAGCAGTTTGGTCTACCAGTTaGACTTCCTTTGCCAATAAA +
Preference number: 4 (lower is better)
Translates to: AALSFHSLKSVRCLNTEAVWSTS*TSFANK
Trigger: TTTATTGGCAAAGGAAGTTCAACTGGTAGACCAAAC...TGCTTCAGTGTTTAAACAGCGAACAGACTTTAAGGAATGAAATGAAAGTGCTGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR GCA 90 bp GAATTGAACCATCTGATGAGTAAAAGCTTGGCATTTTGGAACTGCATCAAGATGAGAAACTTCACCACTTaGTCATACAGCTGTATGAAC +
Preference number: 4 (lower is better)
Translates to: ELNHLMSKSLAFWNCIKMRNFTT*SYSCMN
Trigger: GTTCATACAGCTGTATGAGCAAGTGGTGAAGTTTCT...CATCTTGATGCAGTTCCAAAATGCCAAGCTTTTACTCATCAGATGGTTCAATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CCA 90 bp TCACCTTCATTTGAAAGGAACGAGGACATGAACACTCTTGGCTTGTATGACATGCCCTATAAACATTCTTaGTGGCTGTTTAGACATTTT +
Preference number: 4 (lower is better)
Translates to: SPSFERNEDMNTLGLYDMPYKHS*WLFRHF
Trigger: AAAATGTCTAAACAGCCACCAAGAATGTTTATAGGG...CATGTCATACAAGCCAAGAGTGTTCATGTCCTCGTTCCTTTCAAATGAAGGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR TCA 90 bp GAATTGAACCATCTGATGAGTAAAAGCTTGGCATTTTGGAACTGCATCAAGATGACTTGGTTAGCAGCATaGAAATCATATCACTGTTGT +
Preference number: 4 (lower is better)
Translates to: ELNHLMSKSLAFWNCIKMTWLAA*KSYHCC
Trigger: ACAACAGTGATATGATTTTCATGCTGCTAACCAAGT...CATCTTGATGCAGTTCCAAAATGCCAAGCTTTTACTCATCAGATGGTTCAATTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000592272.5
CDS-3UTR CCA 90 bp TTAATGCCACTGATAAATACCTGTCCCAAGATCTCAATACATGAAGTAAAGAACCAATACAACCATCTATaGGTAACCCATACTGTGGTC +
Preference number: 4 (lower is better)
Translates to: LMPLINTCPKISIHEVKNQYNHL*VTHTVV
Trigger: GACCACAGTATGGGTTACCCATAGATGGTTGTATTG...GTTCTTTACTTCATGTATTGAGATCTTGGGACAGGTATTTATCAGTGGCATTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587884.1
CDS-3UTR CCA 90 bp CTTTCATTTCATTCCTTAAAGTCTGTTCGCTGTTTAAACACTGAAGCAAGTAGAAAGGAACTCTGCTGTTaGAATAGTCGCGTTGTTCAT +
Preference number: 4 (lower is better)
Translates to: LSFHSLKSVRCLNTEASRKELCC*NSRVVH
Trigger: ATGAACAACGCGACTATTCCAACAGCAGAGTTCCTT...TCTACTTGCTTCAGTGTTTAAACAGCGAACAGACTTTAAGGAATGAAATGAAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CAA 90 bp TCGACAGGGGCAAGTGATGTGAATGAGGCTAGGGTCAGGGCCCGAGGGAATGCACGGCTGGCCTTGGCCTaGGCCCGGCGCTGGGGCTTC +
Preference number: 5 (lower is better)
Translates to: STGASDVNEARVRARGNARLALA*ARRWGF
Trigger: GAAGCCCCAGCGCCGGGCCAAGGCCAAGGCCAGCCG...TGCATTCCCTCGGGCCCTGACCCTAGCCTCATTCACATCACTTGCCCCTGTCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS CCA 90 bp TTTTCCTTTGTTTTAGTCCGGCTGGCCTTGGCCTTGGCCCGGCGCTaGGGCTTCACCGCCTCGGCCATAGACCCTTCCGCGGCGCCGTCA +
Preference number: 5 (lower is better)
Translates to: FSFVLVRLALALARR*GFTASAIDPSAAPS
Trigger: TGACGGCGCCGCGGAAGGGTCTATGGCCGAGGCGGTGAAGCCCCAGCGCCGGGCCAAGGCCAAGGCCAGCCGGACTAAAACAAAGGAAAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000587974.1
CDS-3UTR CAA 90 bp CAGCCTAGGCCTGCCCATCACAGGCTGGACCACCAGGCACTGGACAGGGGCAGAGGAACACGGAGGGCCTaGCTTGCAGCATGGTGGAAG +
Preference number: 5 (lower is better)
Translates to: QPRPAHHRLDHQALDRGRGTRRA*LAAWWK
Trigger: CTTCCACCATGCTGCAAGCAAGGCCCTCCGTGTTCC...TCTGCCCCTGTCCAGTGCCTGGTGGTCCAGCCTGTGATGGGCAGGCCTAGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CAA 90 bp GCAGCCCAGGGCTCTCAGAGTGGCCTTCCAACACTCGGGGCTCAGAAGCTGCTCGGAACACGGAGGGCCTaGCTTGCAGCATGGTGGAAG +
Preference number: 5 (lower is better)
Translates to: AAQGSQSGLPTLGAQKLLGTRRA*LAAWWK
Trigger: CTTCCACCATGCTGCAAGCAAGGCCCTCCGTGTTCC...GAGCAGCTTCTGAGCCCCGAGTGTTGGAAGGCCACTCTGAGAGCCCTGGGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000590884.5
CDS GCA 90 bp GTAAAATGTTCTGGGTCTTGGAGCTGCTGCTTGCACTGGGCGGGCTaGAGGGAGGAGGAGAGCTGCTGCAGGTTCTCGCTCTCCACCTGG +
Preference number: 5 (lower is better)
Translates to: VKCSGSWSCCLHWAG*REEESCCRFSLSTW
Trigger: CCAGGTGGAGAGCGAGAACCTGCAGCAGCTCTCCTCCTCCCTGCAGCCCGCCCAGTGCAAGCAGCAGCTCCAAGACCCAGAACATTTTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000587974.1
CDS CCA 90 bp CAGAGCCTGGTGGGCCCAGCGATAAATCAGCAGCCTCTGGAGGGATaGCACGATGGGGAGCTTCAGCTGGGTCTGGGCTTTCTTCAGAGC +
Preference number: 5 (lower is better)
Translates to: QSLVGPAINQQPLEG*HDGELQLGLGFLQS
Trigger: GCTCTGAAGAAAGCCCAGACCCAGCTGAAGCTCCCCATCGTGCCATCCCTCCAGAGGCTGCTGATTTATCGCTGGGCCCACCAGGCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000282041.11
ENST00000585906.5
ENST00000587884.1
ENST00000587974.1
ENST00000590884.5
ENST00000592272.5
CDS CCA 90 bp GGTGGGCCCAGCGATAAATCAGCAGCCTCTGGAGGGATGGCACGATaGGGAGCTTCAGCTGGGTCTGGGCTTTCTTCAGAGCTTGGTCAG +
Preference number: 5 (lower is better)
Translates to: GGPSDKSAASGGMAR*GASAGSGLSSELGQ
Trigger: CTGACCAAGCTCTGAAGAAAGCCCAGACCCAGCTGAAGCTCCCCATCGTGCCATCCCTCCAGAGGCTGCTGATTTATCGCTGGGCCCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000282041.11
ENST00000585906.5
ENST00000587884.1
ENST00000587974.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CAA 90 bp GCATCAGAAGAGCTGGGAAGCACGGCGCCCTCGGTGGACGCTGCCCCCTGCTGGGTTGGAATAGTCGCGTaGTTCATCATCATCAGGACT +
Preference number: 5 (lower is better)
Translates to: ASEELGSTAPSVDAAPCWVGIVA*FIIIRT
Trigger: AGTCCTGATGATGATGAACAACGCGACTATTCCAAC...CCAGCAGGGGGCAGCGTCCACCGAGGGCGCCGTGCTTCCCAGCTCTTCTGATGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000590884.5
CDS-3UTR CAA 90 bp TCGACAGGGGCAAGTGATGTGAATGAGGCTAGGGTCAGGGCCCGAGGGAATGCACTTCCTCCACGGAGCTaGGGTACACCTGTTCCAGCC +
Preference number: 5 (lower is better)
Translates to: STGASDVNEARVRARGNALPPRS*GTPVPA
Trigger: GGCTGGAACAGGTGTACCCAAGCTCCGTGGAGGAAG...TGCATTCCCTCGGGCCCTGACCCTAGCCTCATTCACATCACTTGCCCCTGTCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS GCA 90 bp TGGCAGCCCTTCACTGCCCTCTGCTGGAACACGGAGGGCCTTGCTTaGAGCATGGTGGAAGTCAGCCACCTCGGTCAAACGTCTCTTCAT +
Preference number: 5 (lower is better)
Translates to: WQPFTALCWNTEGLA*SMVEVSHLGQTSLH
Trigger: ATGAAGAGACGTTTGACCGAGGTGGCTGACTTCCACCATGCTGCAAGCAAGGCCCTCCGTGTTCCAGCAGAGGGCAGTGAAGGGCTGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000282041.11
ENST00000585906.5
ENST00000587884.1
ENST00000587974.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CAA 90 bp TCGACAGGGGCAAGTGATGTGAATGAGGCTAGGGTCAGGGCCCGAGGGAATGCAGGGGTAATGCCGCTGTaGGCTGCTTTCGTTGTCCTC +
Preference number: 5 (lower is better)
Translates to: STGASDVNEARVRARGNAGVMPL*AAFVVL
Trigger: GAGGACAACGAAAGCAGCCAACAGCGGCATTACCCC...TGCATTCCCTCGGGCCCTGACCCTAGCCTCATTCACATCACTTGCCCCTGTCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CAA 90 bp GTCCCGAGTGTGCAGGAAGGAGCTTTGGAAACATGTACAGGTGGGTCCCGAATCGCCGAGACCATGCCATaGCACTCCAGCCTGGGTGAC +
Preference number: 5 (lower is better)
Translates to: VPSVQEGALETCTGGSRIAETMP*HSSLGD
Trigger: GTCACCCAGGCTGGAGTGCAATGGCATGGTCTCGGC...GATTCGGGACCCACCTGTACATGTTTCCAAAGCTCCTTCCTGCACACTCGGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CAA 90 bp GGTCCCGAGTGTGCAGGAAGGAGCTTTGGAAACATGTACAGGTGGGTCCCGAATCCCCAGGTGCCTCATTaGTCTCACCCTAGCCCTGGC +
Preference number: 5 (lower is better)
Translates to: GPECAGRSFGNMYRWVPNPQVPH*SHPSPG
Trigger: GCCAGGGCTAGGGTGAGACAAATGAGGCACCTGGGG...ATTCGGGACCCACCTGTACATGTTTCCAAAGCTCCTTCCTGCACACTCGGGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CAA 90 bp GTCCCGAGTGTGCAGGAAGGAGCTTTGGAAACATGTACAGGTGGGTCCCGAATCCACGGAGGGCCTTGCTaGCAGCATGGTGGAAGTCAG +
Preference number: 5 (lower is better)
Translates to: VPSVQEGALETCTGGSRIHGGPC*QHGGSQ
Trigger: CTGACTTCCACCATGCTGCAAGCAAGGCCCTCCGTG...GATTCGGGACCCACCTGTACATGTTTCCAAAGCTCCTTCCTGCACACTCGGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CAA 90 bp CAACACTCGGGGCTCAGAAGCTGCTCCGCGGAGCTTTGCATAAGCAGCCTGAGAAGCCTCACCAGCTCCTaGTGCAGTTCTGGTGAAGTC +
Preference number: 5 (lower is better)
Translates to: QHSGLRSCSAELCISSLRSLTSS*CSSGEV
Trigger: GACTTCACCAGAACTGCACAAGGAGCTGGTGAGGCT...TCTCAGGCTGCTTATGCAAAGCTCCGCGGAGCAGCTTCTGAGCCCCGAGTGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000590884.5
CDS-3UTR CAA 90 bp GACTTCCGGCCAAACCCAATTGCCCCCAGGATCCCAGAGCTGAGTCTCTCCTCACTGCTCCGCGGAGCTTaGCATAAGCAGCCTGAGAAT +
Preference number: 5 (lower is better)
Translates to: DFRPNPIAPRIPELSLSSLLRGA*HKQPEN
Trigger: ATTCTCAGGCTGCTTATGCAAAGCTCCGCGGAGCAG...TGAGGAGAGACTCAGCTCTGGGATCCTGGGGGCAATTGGGTTTGGCCGGAAGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CAA 90 bp GGGGCAAGTGATGTGAATGAGGCTAGGGTCAGGGCCCGAGGGAATGCACAGACTTTTTCCTGCTGGCAGTaGGGTCTTGGGCCAAACAGG +
Preference number: 5 (lower is better)
Translates to: GASDVNEARVRARGNAQTFSCWQ*GLGPNR
Trigger: CCTGTTTGGCCCAAGACCCAACTGCCAGCAGGAAAA...AGTCTGTGCATTCCCTCGGGCCCTGACCCTAGCCTCATTCACATCACTTGCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CAA 90 bp GGGTGCAGGTCCTTCCATGGCAGTTTCCGGTACGTGCTATGGAAAGCGTACAGACTTCCTCCACGGAGCTaGGGTACACCTGTTCCAGCC +
Preference number: 5 (lower is better)
Translates to: GCRSFHGSFRYVLWKAYRLPPRS*GTPVPA
Trigger: GGCTGGAACAGGTGTACCCAAGCTCCGTGGAGGAAG...TCTGTACGCTTTCCATAGCACGTACCGGAAACTGCCATGGAAGGACCTGCACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000592272.5
CDS-3UTR CAA 90 bp CAGCCTAGGCCTGCCCATCACAGGCTGGACCACCAGGCACTGGACAGGGGCAGAACCAACTTCCCAATTTaGGGGGAAGCATTCCAAAAG +
Preference number: 5 (lower is better)
Translates to: QPRPAHHRLDHQALDRGRTNFPI*GEAFQK
Trigger: CTTTTGGAATGCTTCCCCCAAAATTGGGAAGTTGGT...TCTGCCCCTGTCCAGTGCCTGGTGGTCCAGCCTGTGATGGGCAGGCCTAGGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CAA 90 bp TCGACAGGGGCAAGTGATGTGAATGAGGCTAGGGTCAGGGCCCGAGGGAATGCATCAGTCCACAGGGCCTaGGTCTTGCTTGATTCCCGT +
Preference number: 5 (lower is better)
Translates to: STGASDVNEARVRARGNASVHRA*VLLDSR
Trigger: ACGGGAATCAAGCAAGACCAAGGCCCTGTGGACTGA...TGCATTCCCTCGGGCCCTGACCCTAGCCTCATTCACATCACTTGCCCCTGTCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CAA 90 bp CAGCCTAGGCCTGCCCATCACAGGCTGGACCACCAGGCACTGGACAGGGGCAGAATGCTATGTAGACAGTaGTGTAGACACATCTGGCAG +
Preference number: 5 (lower is better)
Translates to: QPRPAHHRLDHQALDRGRMLCRQ*CRHIWQ
Trigger: CTGCCAGATGTGTCTACACAACTGTCTACATAGCAT...TCTGCCCCTGTCCAGTGCCTGGTGGTCCAGCCTGTGATGGGCAGGCCTAGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CAA 90 bp TCTGTAGTCTCAGCCATGTGGCGGACGGACGCCAGGCTCTGGCAGGCTGCTGTTAATAAGAAACAGCTCTaGGGGCTTCCTCGTTCCACC +
Preference number: 5 (lower is better)
Translates to: SVVSAMWRTDARLWQAAVNKKQL*GLPRST
Trigger: GGTGGAACGAGGAAGCCCCAAGAGCTGTTTCTTATT...AACAGCAGCCTGCCAGAGCCTGGCGTCCGTCCGCCACATGGCTGAGACTACAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590884.5
CDS TCA 90 bp GGGAGGAGGAGAGCTGCTGCAGGTTCTCGCTCTCCACCTGGTGCATaGGGTAGAAGAGCTTCCACAGCATTTGCACAGACAGAGTCCCAA +
Preference number: 5 (lower is better)
Translates to: GRRRAAAGSRSPPGA*GRRASTAFAQTESQ
Trigger: TTGGGACTCTGTCTGTGCAAATGCTGTGGAAGCTCTTCTACCTCATGCACCAGGTGGAGAGCGAGAACCTGCAGCAGCTCTCCTCCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000587974.1
CDS TCA 90 bp GGGCATGCCCGCTTTCACAGCCTTCAAGAGAGGATGAAACGTGGGTaGCTCTGTCATGTCAGGCACAGTGACGGAGAAGGGAACAGCTGG +
Preference number: 5 (lower is better)
Translates to: GHARFHSLQERMKRG*LCHVRHSDGEGNSW
Trigger: CCAGCTGTTCCCTTCTCCGTCACTGTGCCTGACATGACAGAGTCACCCACGTTTCATCCTCTCTTGAAGGCTGTGAAAGCGGGCATGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000587974.1
CDS TCA 90 bp CACATGAAAGGGAACACTGTGCTACCACCACAGAGCATCATGTCATaGCGCGCACAGGCTACGGCTGCCACCTCCCTGCCTTCTAGGGAA +
Preference number: 5 (lower is better)
Translates to: HMKGNTVLPPQSIMS*RAQATAATSLPSRE
Trigger: TTCCCTAGAAGGCAGGGAGGTGGCAGCCGTAGCCTGTGCGCGTCATGACATGATGCTCTGTGGTGGTAGCACAGTGTTCCCTTTCATGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587262.1
CDS CCA 90 bp GACCCAGGCCCTGAGGAGGATGGCTTCCGCTCGCTGGGCTTCATGTaGCACATAAACTCAGCTCGATTTTTGACAGGAGACATCAGCAGG +
Preference number: 5 (lower is better)
Translates to: DPGPEEDGFRSLGFM*HINSARFLTGDISR
Trigger: CCTGCTGATGTCTCCTGTCAAAAATCGAGCTGAGTTTATGTGCCACATGAAGCCCAGCGAGCGGAAGCCATCCTCCTCAGGGCCTGGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000587974.1
CDS CCA 90 bp ATGTGTGCCTGGATCATGCTGTTGAGAAGCTTCACGTTGTCCCCATaGCTGGCTCCTGTCAGGTGCTGTGCCACCTTGTGGGTGACCTGT +
Preference number: 5 (lower is better)
Translates to: MCAWIMLLRSFTLSP*LAPVRCCATLWVTC
Trigger: ACAGGTCACCCACAAGGTGGCACAGCACCTGACAGGAGCCAGCCATGGGGACAACGTGAAGCTTCTCAACAGCATGATCCAGGCACACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282041.11
ENST00000585906.5
ENST00000586655.1
ENST00000587974.1
CDS CCA 90 bp TCCCGGACGGTGAAGATACAGAAGGAAGAACTTCTGCCAAATGAGTaGCAGGAGGGGGTGATCAGAAGGTGTGACCAGAGCCTGGTGGGC +
Preference number: 5 (lower is better)
Translates to: SRTVKIQKEELLPNE*QEGVIRRCDQSLVG
Trigger: GCCCACCAGGCTCTGGTCACACCTTCTGATCACCCCCTCCTGCCACTCATTTGGCAGAAGTTCTTCCTTCTGTATCTTCACCGTCCGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000282041.11
ENST00000585906.5
ENST00000587884.1
ENST00000587974.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CAA 90 bp AATTTCAGTAGATCTCCCGACCTGACCCAGTTTCCACAGACAAGTGTTTCAGCATTAGTCCGGCTGGCCTaGGCCTTGGCCCGGCGCTGG +
Preference number: 5 (lower is better)
Translates to: NFSRSPDLTQFPQTSVSALVRLA*ALARRW
Trigger: CCAGCGCCGGGCCAAGGCCAAGGCCAGCCGGACTAA...TGCTGAAACACTTGTCTGTGGAAACTGGGTCAGGTCGGGAGATCTACTGAAATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CAA 90 bp GGTCCGGATACTGCCCCGAAGGAACTCTGCTGTTGGAATAGTCGCGTTGTTCATCACGGAGGGCCTTGCTaGCAGCATGGTGGAAGTCAG +
Preference number: 5 (lower is better)
Translates to: GPDTAPKELCCWNSRVVHHGGPC*QHGGSQ
Trigger: CTGACTTCCACCATGCTGCAAGCAAGGCCCTCCGTG...ATGAACAACGCGACTATTCCAACAGCAGAGTTCCTTCGGGGCAGTATCCGGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CAA 90 bp CAACACTCGGGGCTCAGAAGCTGCTCCGCGGAGCTTTGCATAAGCAGCCTGAGAGGTTCTGGCCTGCTGTaGCAACAGATTCAGGTCTGT +
Preference number: 5 (lower is better)
Translates to: QHSGLRSCSAELCISSLRGSGLL*QQIQVC
Trigger: ACAGACCTGAATCTGTTGCAACAGCAGGCCAGAACC...TCTCAGGCTGCTTATGCAAAGCTCCGCGGAGCAGCTTCTGAGCCCCGAGTGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000590884.5
CDS-3UTR CAA 90 bp CATGCTGCGGGTTTCTGGGTGGGGACTGGAATTCCAGGCATCAGAGAGCACACTGCTGGCAGTTGGGTCTaGGGCCAAACAGGTCATTTC +
Preference number: 5 (lower is better)
Translates to: HAAGFWVGTGIPGIREHTAGSWV*GQTGHF
Trigger: GAAATGACCTGTTTGGCCCAAGACCCAACTGCCAGC...AGTGTGCTCTCTGATGCCTGGAATTCCAGTCCCCACCCAGAAACCCGCAGCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CAA 90 bp TCGACAGGGGCAAGTGATGTGAATGAGGCTAGGGTCAGGGCCCGAGGGAATGCACTTCCTCGTTCCACTTaGAAGAAGGCCTCCATGAGC +
Preference number: 5 (lower is better)
Translates to: STGASDVNEARVRARGNALPRST*KKASMS
Trigger: GCTCATGGAGGCCTTCTTCAAAGTGGAACGAGGAAG...TGCATTCCCTCGGGCCCTGACCCTAGCCTCATTCACATCACTTGCCCCTGTCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CAA 90 bp CAGCCTAGGCCTGCCCATCACAGGCTGGACCACCAGGCACTGGACAGGGGCAGAAGCTCTACAGTGCAATaGAGCAAAGTTACTTGTGCA +
Preference number: 5 (lower is better)
Translates to: QPRPAHHRLDHQALDRGRSSTVQ*SKVTCA
Trigger: TGCACAAGTAACTTTGCTCAATTGCACTGTAGAGCT...TCTGCCCCTGTCCAGTGCCTGGTGGTCCAGCCTGTGATGGGCAGGCCTAGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CAA 90 bp TCGACAGGGGCAAGTGATGTGAATGAGGCTAGGGTCAGGGCCCGAGGGAATGCAGTGCAGGAAGGAGCTTaGGAAACATGTACAGGTGGG +
Preference number: 5 (lower is better)
Translates to: STGASDVNEARVRARGNAVQEGA*ETCTGG
Trigger: CCCACCTGTACATGTTTCCAAAGCTCCTTCCTGCAC...TGCATTCCCTCGGGCCCTGACCCTAGCCTCATTCACATCACTTGCCCCTGTCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS TCA 90 bp ACCAGACCTGAGTGGGCGTGGCCAAGCCCTCCACAAAGGAAGGAGTaGTGTTGCCTGCCACAATCCAGCTTACCAAAGATGAGAGCAGAC +
Preference number: 5 (lower is better)
Translates to: TRPEWAWPSPPQRKE*CCLPQSSLPKMRAD
Trigger: GTCTGCTCTCATCTTTGGTAAGCTGGATTGTGGCAGGCAACATCACTCCTTCCTTTGTGGAGGGCTTGGCCACGCCCACTCAGGTCTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000282041.11
ENST00000585906.5
ENST00000587884.1
ENST00000587974.1
ENST00000590884.5
ENST00000592272.5
CDS GCA 90 bp CGGGAGTTCTGGGTAGAGTCGCTCACTGCGAAGCAAGGGTTTCACTaGCACCAAAGCTGGTGCTTCTCCAGCAATTTCAGCTGGCAACTG +
Preference number: 5 (lower is better)
Translates to: REFWVESLTAKQGFH*HQSWCFSSNFSWQL
Trigger: CAGTTGCCAGCTGAAATTGCTGGAGAAGCACCAGCTTTGGTGGCAGTGAAACCCTTGCTTCGCAGTGAGCGACTCTACCCAGAACTCCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000587974.1
CDS CCA 90 bp CCTTCACTGCCCTCTGCTGGAACACGGAGGGCCTTGCTTGCAGCATaGTGGAAGTCAGCCACCTCGGTCAAACGTCTCTTCATTTCTTTC +
Preference number: 5 (lower is better)
Translates to: PSLPSAGTRRALLAA*WKSATSVKRLFISF
Trigger: GAAAGAAATGAAGAGACGTTTGACCGAGGTGGCTGACTTCCACCATGCTGCAAGCAAGGCCCTCCGTGTTCCAGCAGAGGGCAGTGAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000282041.11
ENST00000585906.5
ENST00000587884.1
ENST00000587974.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CAA 90 bp ATTAATAGGCAGTGGGACAACATGATTCCGGGATGCAGCCTGCCTCTGCAACCCCGGCGCCGTCACCGTTaGTTTTTGTCAAACCCCTGC +
Preference number: 5 (lower is better)
Translates to: INRQWDNMIPGCSLPLQPRRRHR*FLSNPC
Trigger: GCAGGGGTTTGACAAAAACAAACGGTGACGGCGCCG...GGGTTGCAGAGGCAGGCTGCATCCCGGAATCATGTTGTCCCACTGCCTATTAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CAA 90 bp TCGACAGGGGCAAGTGATGTGAATGAGGCTAGGGTCAGGGCCCGAGGGAATGCAAAGGAAGGAGTGATGTaGCCTGCCACAATCCAGCTT +
Preference number: 5 (lower is better)
Translates to: STGASDVNEARVRARGNAKEGVM*PATIQL
Trigger: AAGCTGGATTGTGGCAGGCAACATCACTCCTTCCTT...TGCATTCCCTCGGGCCCTGACCCTAGCCTCATTCACATCACTTGCCCCTGTCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CAA 90 bp CTCCGCGGAGCTTTGCATAAGCAGCCTGAGAATGTCACTGTACTGGTCAGGAAACACGGAGGGCCTTGCTaGCAGCATGGTGGAAGTCAG +
Preference number: 5 (lower is better)
Translates to: LRGALHKQPENVTVLVRKHGGPC*QHGGSQ
Trigger: CTGACTTCCACCATGCTGCAAGCAAGGCCCTCCGTG...TTTCCTGACCAGTACAGTGACATTCTCAGGCTGCTTATGCAAAGCTCCGCGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000590884.5
CDS-3UTR CAA 90 bp GGTCCCGAGTGTGCAGGAAGGAGCTTTGGAAACATGTACAGGTGGGTCCCGAATAGCCTCACCAGCTCCTaGTGCAGTTCTGGTGAAGTC +
Preference number: 5 (lower is better)
Translates to: GPECAGRSFGNMYRWVPNSLTSS*CSSGEV
Trigger: GACTTCACCAGAACTGCACAAGGAGCTGGTGAGGCT...ATTCGGGACCCACCTGTACATGTTTCCAAAGCTCCTTCCTGCACACTCGGGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CAA 90 bp CTCCATGAGCATCTGGTCAGGGTGCAGGTCCTTCCATGGCAGTTTCCGGTACGTGGTTCTGGCCTGCTGTaGCAACAGATTCAGGTCTGT +
Preference number: 5 (lower is better)
Translates to: LHEHLVRVQVLPWQFPVRGSGLL*QQIQVC
Trigger: ACAGACCTGAATCTGTTGCAACAGCAGGCCAGAACC...ACGTACCGGAAACTGCCATGGAAGGACCTGCACCCTGACCAGATGCTCATGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000592272.5
CDS-3UTR CAA 90 bp TCTGTAGTCTCAGCCATGTGGCGGACGGACGCCAGGCTCTGGCAGGCTGCTGTTCATACTGCTTTGGCATaGTGTCTAACAGCTCACCAT +
Preference number: 5 (lower is better)
Translates to: SVVSAMWRTDARLWQAAVHTALA*CLTAHH
Trigger: ATGGTGAGCTGTTAGACACAATGCCAAAGCAGTATG...AACAGCAGCCTGCCAGAGCCTGGCGTCCGTCCGCCACATGGCTGAGACTACAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CAA 90 bp GCGGGTTTCTGGGTGGGGACTGGAATTCCAGGCATCAGAGAGCACACTAACCCACAGCCCATGCATTTTTaGGCCAATCCAGGTCCGGAT +
Preference number: 5 (lower is better)
Translates to: AGFWVGTGIPGIREHTNPQPMHF*ANPGPD
Trigger: ATCCGGACCTGGATTGGCCAAAAAATGCATGGGCTG...TGGGTTAGTGTGCTCTCTGATGCCTGGAATTCCAGTCCCCACCCAGAAACCCGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CAA 90 bp CGGACAAACTGCAGGGTGTGGAATGGGACTCAAGCTTGGCCTGTGTCCACAGACGGAGAGCTGAAGGACTaGGTGCCACCACAAAAACAG +
Preference number: 5 (lower is better)
Translates to: RTNCRVWNGTQAWPVSTDGELKD*VPPQKQ
Trigger: CTGTTTTTGTGGTGGCACCAAGTCCTTCAGCTCTCC...GTCTGTGGACACAGGCCAAGCTTGAGTCCCATTCCACACCCTGCAGTTTGTCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587884.1
CDS-3UTR CAA 90 bp CAGCCTAGGCCTGCCCATCACAGGCTGGACCACCAGGCACTGGACAGGGGCAGAAGGATGCCTTATAAATaGGGTGGCTTGCAATATTTG +
Preference number: 5 (lower is better)
Translates to: QPRPAHHRLDHQALDRGRRMPYK*GGLQYL
Trigger: CAAATATTGCAAGCCACCCAATTTATAAGGCATCCT...TCTGCCCCTGTCCAGTGCCTGGTGGTCCAGCCTGTGATGGGCAGGCCTAGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CAA 90 bp CAGCCTAGGCCTGCCCATCACAGGCTGGACCACCAGGCACTGGACAGGGGCAGAATTGACTTCTTTACTTaGGAGGAACACAAATGGGGT +
Preference number: 5 (lower is better)
Translates to: QPRPAHHRLDHQALDRGRIDFFT*EEHKWG
Trigger: ACCCCATTTGTGTTCCTCCAAAGTAAAGAAGTCAAT...TCTGCCCCTGTCCAGTGCCTGGTGGTCCAGCCTGTGATGGGCAGGCCTAGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CAA 90 bp GGTCCCGAGTGTGCAGGAAGGAGCTTTGGAAACATGTACAGGTGGGTCCCGAATGGGCCTTGGTCTTGCTaGATTCCCGTCTTGATGTGC +
Preference number: 5 (lower is better)
Translates to: GPECAGRSFGNMYRWVPNGPWSC*IPVLMC
Trigger: GCACATCAAGACGGGAATCAAGCAAGACCAAGGCCC...ATTCGGGACCCACCTGTACATGTTTCCAAAGCTCCTTCCTGCACACTCGGGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CAA 90 bp GTCCCGAGTGTGCAGGAAGGAGCTTTGGAAACATGTACAGGTGGGTCCCGAATCTCAGTCCACAGGGCCTaGGTCTTGCTTGATTCCCGT +
Preference number: 5 (lower is better)
Translates to: VPSVQEGALETCTGGSRISVHRA*VLLDSR
Trigger: ACGGGAATCAAGCAAGACCAAGGCCCTGTGGACTGA...GATTCGGGACCCACCTGTACATGTTTCCAAAGCTCCTTCCTGCACACTCGGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS GCA 90 bp GTACTAGTTCCAGTTGAGACGGGAGTTCTGGGTAGAGTCGCTCACTaGGAAGCAAGGGTTTCACTGCCACCAAAGCTGGTGCTTCTCCAG +
Preference number: 5 (lower is better)
Translates to: VLVPVETGVLGRVAH*EARVSLPPKLVLLQ
Trigger: CTGGAGAAGCACCAGCTTTGGTGGCAGTGAAACCCTTGCTTCGCAGTGAGCGACTCTACCCAGAACTCCCGTCTCAACTGGAACTAGTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000587974.1
CDS GCA 90 bp AGAGCATCATGTCATGACGCGCACAGGCTACGGCTGCCACCTCCCTaGCTTCTAGGGAAGATGTGCAGGCAAACTTCTAACCCTTCATTG +
Preference number: 5 (lower is better)
Translates to: RASCHDAHRLRLPPP*LLGKMCRQTSNPSL
Trigger: CAATGAAGGGTTAGAAGTTTGCCTGCACATCTTCCCTAGAAGGCAGGGAGGTGGCAGCCGTAGCCTGTGCGCGTCATGACATGATGCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587262.1
CDS CCA 90 bp TCACTGCCCTCTGCTGGAACACGGAGGGCCTTGCTTGCAGCATGGTaGAAGTCAGCCACCTCGGTCAAACGTCTCTTCATTTCTTTCAAC +
Preference number: 5 (lower is better)
Translates to: SLPSAGTRRALLAAW*KSATSVKRLFISFN
Trigger: GTTGAAAGAAATGAAGAGACGTTTGACCGAGGTGGCTGACTTCCACCATGCTGCAAGCAAGGCCCTCCGTGTTCCAGCAGAGGGCAGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000282041.11
ENST00000585906.5
ENST00000587884.1
ENST00000587974.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CAA 90 bp TCGACAGGGGCAAGTGATGTGAATGAGGCTAGGGTCAGGGCCCGAGGGAATGCACAAATGCCAAGTCTTTaGGCCTTCAGCACATGTAGG +
Preference number: 5 (lower is better)
Translates to: STGASDVNEARVRARGNAQMPSL*AFSTCR
Trigger: CCTACATGTGCTGAAGGCCAAAAGACTTGGCATTTG...TGCATTCCCTCGGGCCCTGACCCTAGCCTCATTCACATCACTTGCCCCTGTCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CAA 90 bp GCGGGTTTCTGGGTGGGGACTGGAATTCCAGGCATCAGAGAGCACACTAACCCAGAGGAAGAGGATAGGTaGTTCTCGGTACCAGAGATG +
Preference number: 5 (lower is better)
Translates to: AGFWVGTGIPGIREHTNPEEEDR*FSVPEM
Trigger: CATCTCTGGTACCGAGAACAACCTATCCTCTTCCTC...TGGGTTAGTGTGCTCTCTGATGCCTGGAATTCCAGTCCCCACCCAGAAACCCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CAA 90 bp GGTCCCGAGTGTGCAGGAAGGAGCTTTGGAAACATGTACAGGTGGGTCCCGAATGGCTTTCTTCAGAGCTaGGTCAGGGGTGAAAGCAGA +
Preference number: 5 (lower is better)
Translates to: GPECAGRSFGNMYRWVPNGFLQS*VRGESR
Trigger: TCTGCTTTCACCCCTGACCAAGCTCTGAAGAAAGCC...ATTCGGGACCCACCTGTACATGTTTCCAAAGCTCCTTCCTGCACACTCGGGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CAA 90 bp AGGCAGACAATCATGCTGCGGGTTTCTGGGTGGGGACTGGAATTCCAGGCATCAGGCTTTCTTCAGAGCTaGGTCAGGGGTGAAAGCAGA +
Preference number: 5 (lower is better)
Translates to: RQTIMLRVSGWGLEFQASGFLQS*VRGESR
Trigger: TCTGCTTTCACCCCTGACCAAGCTCTGAAGAAAGCC...TGATGCCTGGAATTCCAGTCCCCACCCAGAAACCCGCAGCATGATTGTCTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CAA 90 bp ATTAATAGGCAGTGGGACAACATGATTCCGGGATGCAGCCTGCCTCTGCAACCCGACAACTGCGGCTCCTaGGCATTTCTTACCGCTGCT +
Preference number: 5 (lower is better)
Translates to: INRQWDNMIPGCSLPLQPDNCGS*AFLTAA
Trigger: AGCAGCGGTAAGAAATGCCAAGGAGCCGCAGTTGTC...GGGTTGCAGAGGCAGGCTGCATCCCGGAATCATGTTGTCCCACTGCCTATTAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CAA 90 bp AGACAATCATGCTGCGGGTTTCTGGGTGGGGACTGGAATTCCAGGCATCAGAGAGCTGGCAGTTGGGTCTaGGGCCAAACAGGTCATTTC +
Preference number: 5 (lower is better)
Translates to: RQSCCGFLGGDWNSRHQRAGSWV*GQTGHF
Trigger: GAAATGACCTGTTTGGCCCAAGACCCAACTGCCAGC...TCTCTGATGCCTGGAATTCCAGTCCCCACCCAGAAACCCGCAGCATGATTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CAA 90 bp GTCAGGGTGCAGGTCCTTCCATGGCAGTTTCCGGTACGTGCTATGGAAAGCGTACTTCCTCGTTCCACTTaGAAGAAGGCCTCCATGAGC +
Preference number: 5 (lower is better)
Translates to: VRVQVLPWQFPVRAMESVLPRST*KKASMS
Trigger: GCTCATGGAGGCCTTCTTCAAAGTGGAACGAGGAAG...TACGCTTTCCATAGCACGTACCGGAAACTGCCATGGAAGGACCTGCACCCTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000592272.5
CDS-3UTR CAA 90 bp GGGGCAAGTGATGTGAATGAGGCTAGGGTCAGGGCCCGAGGGAATGCACAGACTAGCACACTAACCCAGTaGACTTCACAGAGTACAGAC +
Preference number: 5 (lower is better)
Translates to: GASDVNEARVRARGNAQTSTLTQ*TSQSTD
Trigger: GTCTGTACTCTGTGAAGTCAACTGGGTTAGTGTGCT...AGTCTGTGCATTCCCTCGGGCCCTGACCCTAGCCTCATTCACATCACTTGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CAA 90 bp GGAGGCAGACAATCATGCTGCGGGTTTCTGGGTGGGGACTGGAATTCCAGGCATACCTGTTCCAGCCACTaGCTTAAGATGAGCAGCACT +
Preference number: 5 (lower is better)
Translates to: GGRQSCCGFLGGDWNSRHTCSSH*LKMSST
Trigger: AGTGCTGCTCATCTTAAGCAAGTGGCTGGAACAGGT...ATGCCTGGAATTCCAGTCCCCACCCAGAAACCCGCAGCATGATTGTCTGCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CAA 90 bp GTAAAGAGTCAAGTAACTGCCCAAGGTGAGGCACTCCTGCAGGAACTCTTCCATCTTCCTCCACGGAGCTaGGGTACACCTGTTCCAGCC +
Preference number: 5 (lower is better)
Translates to: VKSQVTAQGEALLQELFHLPPRS*GTPVPA
Trigger: GGCTGGAACAGGTGTACCCAAGCTCCGTGGAGGAAG...ATGGAAGAGTTCCTGCAGGAGTGCCTCACCTTGGGCAGTTACTTGACTCTTTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CAA 90 bp AGGCAGACAATCATGCTGCGGGTTTCTGGGTGGGGACTGGAATTCCAGGCATCAGGAGAGCTGAAGGACTaGGTGCCACCACAAAAACAG +
Preference number: 5 (lower is better)
Translates to: RQTIMLRVSGWGLEFQASGELKD*VPPQKQ
Trigger: CTGTTTTTGTGGTGGCACCAAGTCCTTCAGCTCTCC...TGATGCCTGGAATTCCAGTCCCCACCCAGAAACCCGCAGCATGATTGTCTGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CAA 90 bp GGTCCCGAGTGTGCAGGAAGGAGCTTTGGAAACATGTACAGGTGGGTCCCGAATCACAGGGCCTTGGTCTaGCTTGATTCCCGTCTTGAT +
Preference number: 5 (lower is better)
Translates to: GPECAGRSFGNMYRWVPNHRALV*LDSRLD
Trigger: ATCAAGACGGGAATCAAGCAAGACCAAGGCCCTGTG...ATTCGGGACCCACCTGTACATGTTTCCAAAGCTCCTTCCTGCACACTCGGGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CAA 90 bp CATTCGGCAACTGTGAGTGGCTCTGCACCCAAGTGGAACTTAGTAAGTTTCTCTGCCGAGACCATGCCATaGCACTCCAGCCTGGGTGAC +
Preference number: 5 (lower is better)
Translates to: HSATVSGSAPKWNLVSFSAETMP*HSSLGD
Trigger: GTCACCCAGGCTGGAGTGCAATGGCATGGTCTCGGC...AGAGAAACTTACTAAGTTCCACTTGGGTGCAGAGCCACTCACAGTTGCCGAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS TCA 90 bp TATATATACATTGAAGAGCCTCACCAGCTCCTTGTGCAGTTCTGGTaGAGTCAGGTAACCAGGGGTGCCAGAGTGGCTCTCTGGCAGCCC +
Preference number: 5 (lower is better)
Translates to: YIYIEEPHQLLVQFW*SQVTRGARVALWQP
Trigger: GGGCTGCCAGAGAGCCACTCTGGCACCCCTGGTTACCTGACTTCACCAGAACTGCACAAGGAGCTGGTGAGGCTCTTCAATGTATATATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000282041.11
ENST00000585906.5
ENST00000587884.1
ENST00000587974.1
ENST00000590884.5
ENST00000592272.5
CDS CCA 90 bp AAGTTCTTGGGGGTTTCTACTTTAGTTCCAACATTGTCTCCAGGGTaGACCTTTGGAGTGACTGCACTGTCCCCCACACAGGGTCTGGCC +
Preference number: 5 (lower is better)
Translates to: KFLGVSTLVPTLSPG*TFGVTALSPTQGLA
Trigger: GGCCAGACCCTGTGTGGGGGACAGTGCAGTCACTCCAAAGGTCCACCCTGGAGACAATGTTGGAACTAAAGTAGAAACCCCCAAGAACTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000587974.1
CDS-3UTR CAA 90 bp GTCCCGAGTGTGCAGGAAGGAGCTTTGGAAACATGTACAGGTGGGTCCCGAATCCGTCACCGTTTGTTTTaGTCAAACCCCTGCGCTTCA +
Preference number: 5 (lower is better)
Translates to: VPSVQEGALETCTGGSRIRHRLF*SNPCAS
Trigger: TGAAGCGCAGGGGTTTGACAAAAACAAACGGTGACG...GATTCGGGACCCACCTGTACATGTTTCCAAAGCTCCTTCCTGCACACTCGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CAA 90 bp AGACAATCATGCTGCGGGTTTCTGGGTGGGGACTGGAATTCCAGGCATCAGAGAGGTTCTGGCCTGCTGTaGCAACAGATTCAGGTCTGT +
Preference number: 5 (lower is better)
Translates to: RQSCCGFLGGDWNSRHQRGSGLL*QQIQVC
Trigger: ACAGACCTGAATCTGTTGCAACAGCAGGCCAGAACC...TCTCTGATGCCTGGAATTCCAGTCCCCACCCAGAAACCCGCAGCATGATTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CAA 90 bp CTGCCCCGAAGGAACTCTGCTGTTGGAATAGTCGCGTTGTTCATCATCATCAGGTTTTCCTGCTGGCAGTaGGGTCTTGGGCCAAACAGG +
Preference number: 5 (lower is better)
Translates to: LPRRNSAVGIVALFIIIRFSCWQ*GLGPNR
Trigger: CCTGTTTGGCCCAAGACCCAACTGCCAGCAGGAAAA...CCTGATGATGATGAACAACGCGACTATTCCAACAGCAGAGTTCCTTCGGGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CAA 90 bp CATGCTGCGGGTTTCTGGGTGGGGACTGGAATTCCAGGCATCAGAGAGCACACTAGCACACTAACCCAGTaGACTTCACAGAGTACAGAC +
Preference number: 5 (lower is better)
Translates to: HAAGFWVGTGIPGIREHTSTLTQ*TSQSTD
Trigger: GTCTGTACTCTGTGAAGTCAACTGGGTTAGTGTGCT...AGTGTGCTCTCTGATGCCTGGAATTCCAGTCCCCACCCAGAAACCCGCAGCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CAA 90 bp GACTTCCGGCCAAACCCAATTGCCCCCAGGATCCCAGAGCTGAGTCTCTCCTCAGGTGATTTTTCCATTTaGTTCCAGGGTGCTGAGGAA +
Preference number: 5 (lower is better)
Translates to: DFRPNPIAPRIPELSLSSGDFSI*FQGAEE
Trigger: TTCCTCAGCACCCTGGAACAAAATGGAAAAATCACC...TGAGGAGAGACTCAGCTCTGGGATCCTGGGGGCAATTGGGTTTGGCCGGAAGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CAA 90 bp ATTAATAGGCAGTGGGACAACATGATTCCGGGATGCAGCCTGCCTCTGCAACCCCAGCCCATGCATTTTTaGGCCAATCCAGGTCCGGAT +
Preference number: 5 (lower is better)
Translates to: INRQWDNMIPGCSLPLQPQPMHF*ANPGPD
Trigger: ATCCGGACCTGGATTGGCCAAAAAATGCATGGGCTG...GGGTTGCAGAGGCAGGCTGCATCCCGGAATCATGTTGTCCCACTGCCTATTAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CAA 90 bp GGTCCCGAGTGTGCAGGAAGGAGCTTTGGAAACATGTACAGGTGGGTCCCGAATACCTGTTCCAGCCACTaGCTTAAGATGAGCAGCACT +
Preference number: 5 (lower is better)
Translates to: GPECAGRSFGNMYRWVPNTCSSH*LKMSST
Trigger: AGTGCTGCTCATCTTAAGCAAGTGGCTGGAACAGGT...ATTCGGGACCCACCTGTACATGTTTCCAAAGCTCCTTCCTGCACACTCGGGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CAA 90 bp AGGCAGACAATCATGCTGCGGGTTTCTGGGTGGGGACTGGAATTCCAGGCATCAACCTGTTCCAGCCACTaGCTTAAGATGAGCAGCACT +
Preference number: 5 (lower is better)
Translates to: RQTIMLRVSGWGLEFQASTCSSH*LKMSST
Trigger: AGTGCTGCTCATCTTAAGCAAGTGGCTGGAACAGGT...TGATGCCTGGAATTCCAGTCCCCACCCAGAAACCCGCAGCATGATTGTCTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CAA 90 bp GTCCCGAGTGTGCAGGAAGGAGCTTTGGAAACATGTACAGGTGGGTCCCGAATCGAAGCTTTTCCCATCTaGAAGGCAATGGCCAGGATG +
Preference number: 5 (lower is better)
Translates to: VPSVQEGALETCTGGSRIEAFPI*KAMARM
Trigger: CATCCTGGCCATTGCCTTCAAGATGGGAAAAGCTTC...GATTCGGGACCCACCTGTACATGTTTCCAAAGCTCCTTCCTGCACACTCGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CAA 90 bp GTCCCGAGTGTGCAGGAAGGAGCTTTGGAAACATGTACAGGTGGGTCCCGAATCCTAACGCCTCCCAACTaGCATCTCAGTCAACTACAC +
Preference number: 5 (lower is better)
Translates to: VPSVQEGALETCTGGSRILTPPN*HLSQLH
Trigger: GTGTAGTTGACTGAGATGCAAGTTGGGAGGCGTTAG...GATTCGGGACCCACCTGTACATGTTTCCAAAGCTCCTTCCTGCACACTCGGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CAA 90 bp GGTCCCGAGTGTGCAGGAAGGAGCTTTGGAAACATGTACAGGTGGGTCCCGAATCTAACGCCTCCCAACTaGCATCTCAGTCAACTACAC +
Preference number: 5 (lower is better)
Translates to: GPECAGRSFGNMYRWVPNLTPPN*HLSQLH
Trigger: GTGTAGTTGACTGAGATGCAAGTTGGGAGGCGTTAG...ATTCGGGACCCACCTGTACATGTTTCCAAAGCTCCTTCCTGCACACTCGGGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CAA 90 bp GGGGCAAGTGATGTGAATGAGGCTAGGGTCAGGGCCCGAGGGAATGCACAGACTGTTTCAGCAGGTCCATaGGCTTCATCTGAGTTTGAA +
Preference number: 5 (lower is better)
Translates to: GASDVNEARVRARGNAQTVSAGP*ASSEFE
Trigger: TTCAAACTCAGATGAAGCCAATGGACCTGCTGAAAC...AGTCTGTGCATTCCCTCGGGCCCTGACCCTAGCCTCATTCACATCACTTGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CAA 90 bp ATTAATAGGCAGTGGGACAACATGATTCCGGGATGCAGCCTGCCTCTGCAACCCCACAGGGCCTTGGTCTaGCTTGATTCCCGTCTTGAT +
Preference number: 5 (lower is better)
Translates to: INRQWDNMIPGCSLPLQPHRALV*LDSRLD
Trigger: ATCAAGACGGGAATCAAGCAAGACCAAGGCCCTGTG...GGGTTGCAGAGGCAGGCTGCATCCCGGAATCATGTTGTCCCACTGCCTATTAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CAA 90 bp GTCCCGAATCCACTGCTACTGTCATGCTATGTAGACAGTTGTGTAGACACATCTCCCCAGGTGCCTCATTaGTCTCACCCTAGCCCTGGC +
Preference number: 5 (lower is better)
Translates to: VPNPLLLSCYVDSCVDTSPQVPH*SHPSPG
Trigger: GCCAGGGCTAGGGTGAGACAAATGAGGCACCTGGGG...AGATGTGTCTACACAACTGTCTACATAGCATGACAGTAGCAGTGGATTCGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CAA 90 bp GGTCCCGAGTGTGCAGGAAGGAGCTTTGGAAACATGTACAGGTGGGTCCCGAATAATAAGAAACAGCTCTaGGGGCTTCCTCGTTCCACC +
Preference number: 5 (lower is better)
Translates to: GPECAGRSFGNMYRWVPNNKKQL*GLPRST
Trigger: GGTGGAACGAGGAAGCCCCAAGAGCTGTTTCTTATT...ATTCGGGACCCACCTGTACATGTTTCCAAAGCTCCTTCCTGCACACTCGGGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590854.5
CDS CCA 90 bp GTAGAGTCGCTCACTGCGAAGCAAGGGTTTCACTGCCACCAAAGCTaGTGCTTCTCCAGCAATTTCAGCTGGCAACTGGGGATACAGTTT +
Preference number: 5 (lower is better)
Translates to: VESLTAKQGFHCHQS*CFSSNFSWQLGIQF
Trigger: AAACTGTATCCCCAGTTGCCAGCTGAAATTGCTGGAGAAGCACCAGCTTTGGTGGCAGTGAAACCCTTGCTTCGCAGTGAGCGACTCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000587974.1
CDS-3UTR CAA 90 bp GGGGCAAGTGATGTGAATGAGGCTAGGGTCAGGGCCCGAGGGAATGCACAGACTTTCAGATGGTCTCCTTaGAATTCACAGGCTAGAGAA +
Preference number: 5 (lower is better)
Translates to: GASDVNEARVRARGNAQTFRWSP*NSQARE
Trigger: TTCTCTAGCCTGTGAATTCAAAGGAGACCATCTGAA...AGTCTGTGCATTCCCTCGGGCCCTGACCCTAGCCTCATTCACATCACTTGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CAA 90 bp ATTAATAGGCAGTGGGACAACATGATTCCGGGATGCAGCCTGCCTCTGCAACCCAAAATGTTCTGGGTCTaGGAGCTGCTGCTTGCACTG +
Preference number: 5 (lower is better)
Translates to: INRQWDNMIPGCSLPLQPKMFWV*ELLLAL
Trigger: CAGTGCAAGCAGCAGCTCCAAGACCCAGAACATTTT...GGGTTGCAGAGGCAGGCTGCATCCCGGAATCATGTTGTCCCACTGCCTATTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CAA 90 bp AGCACACTCTGGTACGACACAATATCCACAAGATGCCATGAAAGTGAGCTTGTCCACGGAGGGCCTTGCTaGCAGCATGGTGGAAGTCAG +
Preference number: 5 (lower is better)
Translates to: STLWYDTISTRCHESELVHGGPC*QHGGSQ
Trigger: CTGACTTCCACCATGCTGCAAGCAAGGCCCTCCGTG...GACAAGCTCACTTTCATGGCATCTTGTGGATATTGTGTCGTACCAGAGTGTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CAA 90 bp TGCTTCTGGCTGTCAGTAGGAATAGAAAGGCCCGCAGACACTTTTAGGAGCTTCTTTTCCTGCTGGCAGTaGGGTCTTGGGCCAAACAGG +
Preference number: 5 (lower is better)
Translates to: CFWLSVGIERPADTFRSFFSCWQ*GLGPNR
Trigger: CCTGTTTGGCCCAAGACCCAACTGCCAGCAGGAAAA...GAAGCTCCTAAAAGTGTCTGCGGGCCTTTCTATTCCTACTGACAGCCAGAAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CAA 90 bp GGGTGCAGGTCCTTCCATGGCAGTTTCCGGTACGTGCTATGGAAAGCGTACAGATGTTGGCTGCTTTCGTaGTCCTCTAAAACCAGGATC +
Preference number: 5 (lower is better)
Translates to: GCRSFHGSFRYVLWKAYRCWLLS*SSKTRI
Trigger: GATCCTGGTTTTAGAGGACAACGAAAGCAGCCAACA...TCTGTACGCTTTCCATAGCACGTACCGGAAACTGCCATGGAAGGACCTGCACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587884.1
CDS-3UTR CAA 90 bp TGCATCAAGATGCTTCTGGCTGTCAGTAGGAATAGAAAGGCCCGCAGACACTTTGGGGTAATGCCGCTGTaGGCTGCTTTCGTTGTCCTC +
Preference number: 5 (lower is better)
Translates to: CIKMLLAVSRNRKARRHFGVMPL*AAFVVL
Trigger: GAGGACAACGAAAGCAGCCAACAGCGGCATTACCCC...AAAGTGTCTGCGGGCCTTTCTATTCCTACTGACAGCCAGAAGCATCTTGATGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587884.1
CDS-3UTR CAA 90 bp GCCCCGAAGGAACTCTGCTGTTGGAATAGTCGCGTTGTTCATCATCATCAGGACCTTCCTCGTTCCACTTaGAAGAAGGCCTCCATGAGC +
Preference number: 5 (lower is better)
Translates to: APKELCCWNSRVVHHHQDLPRST*KKASMS
Trigger: GCTCATGGAGGCCTTCTTCAAAGTGGAACGAGGAAG...GTCCTGATGATGATGAACAACGCGACTATTCCAACAGCAGAGTTCCTTCGGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000592272.5
CDS-3UTR CAA 90 bp GGTCCCGAGTGTGCAGGAAGGAGCTTTGGAAACATGTACAGGTGGGTCCCGAATAATAAGAAACAGCTCTaGGGGCTTCCTCGTTCCACT +
Preference number: 5 (lower is better)
Translates to: GPECAGRSFGNMYRWVPNNKKQL*GLPRST
Trigger: AGTGGAACGAGGAAGCCCCAAGAGCTGTTTCTTATT...ATTCGGGACCCACCTGTACATGTTTCCAAAGCTCCTTCCTGCACACTCGGGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CAA 90 bp GTCAGGGTGCAGGTCCTTCCATGGCAGTTTCCGGTACGTGCTATGGAAAGCGTAAATAAGAAACAGCTCTaGGGGCTTCCTCGTTCCACT +
Preference number: 5 (lower is better)
Translates to: VRVQVLPWQFPVRAMESVNKKQL*GLPRST
Trigger: AGTGGAACGAGGAAGCCCCAAGAGCTGTTTCTTATT...TACGCTTTCCATAGCACGTACCGGAAACTGCCATGGAAGGACCTGCACCCTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000592272.5
CDS-3UTR CAA 90 bp GTCCCGAATCCACTGCTACTGTCATGCTATGTAGACAGTTGTGTAGACACATCTCTTCCTCCACGGAGCTaGGGTACACCTGTTCCAGCC +
Preference number: 5 (lower is better)
Translates to: VPNPLLLSCYVDSCVDTSLPPRS*GTPVPA
Trigger: GGCTGGAACAGGTGTACCCAAGCTCCGTGGAGGAAG...AGATGTGTCTACACAACTGTCTACATAGCATGACAGTAGCAGTGGATTCGGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CAA 90 bp TTTTGGGTGCTGTACATGCTTCACAATAATGCATCAGGTGCAACCAAAGGGCTCCTTCCTCCACGGAGCTaGGGTACACCTGTTCCAGCC +
Preference number: 5 (lower is better)
Translates to: FWVLYMLHNNASGATKGLLPPRS*GTPVPA
Trigger: GGCTGGAACAGGTGTACCCAAGCTCCGTGGAGGAAG...GAGCCCTTTGGTTGCACCTGATGCATTATTGTGAAGCATGTACAGCACCCAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000592272.5
CDS-3UTR CAA 90 bp GGTCCCGAGTGTGCAGGAAGGAGCTTTGGAAACATGTACAGGTGGGTCCCGAATACGATTCCAGGACATTaGCTTCCTGCTCCAGAAGAA +
Preference number: 5 (lower is better)
Translates to: GPECAGRSFGNMYRWVPNTIPGH*LPAPEE
Trigger: TTCTTCTGGAGCAGGAAGCAAATGTCCTGGAATCGT...ATTCGGGACCCACCTGTACATGTTTCCAAAGCTCCTTCCTGCACACTCGGGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CAA 90 bp CACCTGCAAGCAAGCACCAACTTAAATGTATGCCCCAGGTGCCTCATTTGTCTCCAAGGAAGCACTCTCTaGGCACCTGCAAGCAAGCAC +
Preference number: 5 (lower is better)
Translates to: HLQASTNLNVCPRCLICLQGSTL*APASKH
Trigger: GTGCTTGCTTGCAGGTGCCAAGAGAGTGCTTCCTTG...GAGACAAATGAGGCACCTGGGGCATACATTTAAGTTGGTGCTTGCTTGCAGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS GCA 90 bp CACCGCTGTCCAAGTGTAGGAACAAGAGGAGATGCGATAAAAACCTaGCAAGCACACAGGAGGACGCACTTTACCTTCCGATCAGAACTC +
Preference number: 5 (lower is better)
Translates to: HRCPSVGTRGDAIKT*QAHRRTHFTFRSEL
Trigger: GAGTTCTGATCGGAAGGTAAAGTGCGTCCTCCTGTGTGCTTGGCAGGTTTTTATCGCATCTCCTCTTGTTCCTACACTTGGACAGCGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586655.1
CDS-3UTR CAA 90 bp GGTCCCGAGTGTGCAGGAAGGAGCTTTGGAAACATGTACAGGTGGGTCCCGAATACTTTAGTTCCAACATaGTCTCCAGGGTGGACCTTT +
Preference number: 5 (lower is better)
Translates to: GPECAGRSFGNMYRWVPNTLVPT*SPGWTF
Trigger: AAAGGTCCACCCTGGAGACAATGTTGGAACTAAAGT...ATTCGGGACCCACCTGTACATGTTTCCAAAGCTCCTTCCTGCACACTCGGGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CAA 90 bp GGGGCAAGTGATGTGAATGAGGCTAGGGTCAGGGCCCGAGGGAATGCACAGACTGGGTTATGCAACACTTaGATCTGGATAAAAGGAACA +
Preference number: 5 (lower is better)
Translates to: GASDVNEARVRARGNAQTGLCNT*IWIKGT
Trigger: TGTTCCTTTTATCCAGATCAAAGTGTTGCATAACCC...AGTCTGTGCATTCCCTCGGGCCCTGACCCTAGCCTCATTCACATCACTTGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CAA 90 bp GGGGCAAGTGATGTGAATGAGGCTAGGGTCAGGGCCCGAGGGAATGCACAGACTAGTTCCACTAGTGAGTaGGCAAAGGCAAAAATTTTC +
Preference number: 5 (lower is better)
Translates to: GASDVNEARVRARGNAQTSSTSE*AKAKIF
Trigger: GAAAATTTTTGCCTTTGCCAACTCACTAGTGGAACT...AGTCTGTGCATTCCCTCGGGCCCTGACCCTAGCCTCATTCACATCACTTGCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CAA 90 bp GTCCCGAATCCACTGCTACTGTCATGCTATGTAGACAGTTGTGTAGACACATCTAGGTGCTGTGCCACCTaGTGGGTGACCTGTTGTGTG +
Preference number: 5 (lower is better)
Translates to: VPNPLLLSCYVDSCVDTSRCCAT*WVTCCV
Trigger: CACACAACAGGTCACCCACAAGGTGGCACAGCACCT...AGATGTGTCTACACAACTGTCTACATAGCATGACAGTAGCAGTGGATTCGGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CAA 90 bp CACCTGCAAGCAAGCACCAACTTAAATGTATGCCCCAGGTGCCTCATTTGTCTCGCCTGGATCATGCTGTaGAGAAGCTTCACGTTGTCC +
Preference number: 5 (lower is better)
Translates to: HLQASTNLNVCPRCLICLAWIML*RSFTLS
Trigger: GGACAACGTGAAGCTTCTCAACAGCATGATCCAGGC...GAGACAAATGAGGCACCTGGGGCATACATTTAAGTTGGTGCTTGCTTGCAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CAA 90 bp ACCACAAAAACAGCTTTGCCTCTTCCTCCACGGAGCTTGGGTACACCTGTTCCAAAGGAAGGAGTGATGTaGCCTGCCACAATCCAGCTT +
Preference number: 5 (lower is better)
Translates to: TTKTALPLPPRSLGTPVPKEGVM*PATIQL
Trigger: AAGCTGGATTGTGGCAGGCAACATCACTCCTTCCTT...TGGAACAGGTGTACCCAAGCTCCGTGGAGGAAGAGGCAAAGCTGTTTTTGTGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CAA 90 bp GATACTGCCCCGAAGGAACTCTGCTGTTGGAATAGTCGCGTTGTTCATCATCATGACAACTGCGGCTCCTaGGCATTTCTTACCGCTGCT +
Preference number: 5 (lower is better)
Translates to: DTAPKELCCWNSRVVHHHDNCGS*AFLTAA
Trigger: AGCAGCGGTAAGAAATGCCAAGGAGCCGCAGTTGTC...ATGATGATGAACAACGCGACTATTCCAACAGCAGAGTTCCTTCGGGGCAGTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CAA 90 bp TGCATCAAGATGCTTCTGGCTGTCAGTAGGAATAGAAAGGCCCGCAGACACTTTCTGCTCCGCGGAGCTTaGCATAAGCAGCCTGAGAAT +
Preference number: 5 (lower is better)
Translates to: CIKMLLAVSRNRKARRHFLLRGA*HKQPEN
Trigger: ATTCTCAGGCTGCTTATGCAAAGCTCCGCGGAGCAG...AAAGTGTCTGCGGGCCTTTCTATTCCTACTGACAGCCAGAAGCATCTTGATGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CAA 90 bp ATTAATAGGCAGTGGGACAACATGATTCCGGGATGCAGCCTGCCTCTGCAACCCTGTTGGCTGCTTTCGTaGTCCTCTAAAACCAGGATC +
Preference number: 5 (lower is better)
Translates to: INRQWDNMIPGCSLPLQPCWLLS*SSKTRI
Trigger: GATCCTGGTTTTAGAGGACAACGAAAGCAGCCAACA...GGGTTGCAGAGGCAGGCTGCATCCCGGAATCATGTTGTCCCACTGCCTATTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CAA 90 bp GGTCCCGAGTGTGCAGGAAGGAGCTTTGGAAACATGTACAGGTGGGTCCCGAATGGTGATTTTTCCATTTaGTTCCAGGGTGCTGAGGAA +
Preference number: 5 (lower is better)
Translates to: GPECAGRSFGNMYRWVPNGDFSI*FQGAEE
Trigger: TTCCTCAGCACCCTGGAACAAAATGGAAAAATCACC...ATTCGGGACCCACCTGTACATGTTTCCAAAGCTCCTTCCTGCACACTCGGGACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CAA 90 bp CTCCGCGGAGCTTTGCATAAGCAGCCTGAGAATGTCACTGTACTGGTCAGGAAAACCTGTTCCAGCCACTaGCTTAAGATGAGCAGCACT +
Preference number: 5 (lower is better)
Translates to: LRGALHKQPENVTVLVRKTCSSH*LKMSST
Trigger: AGTGCTGCTCATCTTAAGCAAGTGGCTGGAACAGGT...TTTCCTGACCAGTACAGTGACATTCTCAGGCTGCTTATGCAAAGCTCCGCGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000590884.5
CDS-3UTR CAA 90 bp GGGGCAAGTGATGTGAATGAGGCTAGGGTCAGGGCCCGAGGGAATGCACAGACTGGTGGCTTGCAATATTaGATCCTGGTATTCAACATA +
Preference number: 5 (lower is better)
Translates to: GASDVNEARVRARGNAQTGGLQY*ILVFNI
Trigger: TATGTTGAATACCAGGATCAAATATTGCAAGCCACC...AGTCTGTGCATTCCCTCGGGCCCTGACCCTAGCCTCATTCACATCACTTGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CAA 90 bp TCGACAGGGGCAAGTGATGTGAATGAGGCTAGGGTCAGGGCCCGAGGGAATGCAAGTTACACACAGGCTTaGGTAATGAATGAACTGTCA +
Preference number: 5 (lower is better)
Translates to: STGASDVNEARVRARGNASYTQA*VMNELS
Trigger: TGACAGTTCATTCATTACCAAAGCCTGTGTGTAACT...TGCATTCCCTCGGGCCCTGACCCTAGCCTCATTCACATCACTTGCCCCTGTCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CAA 90 bp GTCCCGAGTGTGCAGGAAGGAGCTTTGGAAACATGTACAGGTGGGTCCCGAATCACCAACTTCCCAATTTaGGGGGAAGCATTCCAAAAG +
Preference number: 5 (lower is better)
Translates to: VPSVQEGALETCTGGSRITNFPI*GEAFQK
Trigger: CTTTTGGAATGCTTCCCCCAAAATTGGGAAGTTGGT...GATTCGGGACCCACCTGTACATGTTTCCAAAGCTCCTTCCTGCACACTCGGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CAA 90 bp CATTCGGCAACTGTGAGTGGCTCTGCACCCAAGTGGAACTTAGTAAGTTTCTCTGGGCCTTGGTCTTGCTaGATTCCCGTCTTGATGTGC +
Preference number: 5 (lower is better)
Translates to: HSATVSGSAPKWNLVSFSGPWSC*IPVLMC
Trigger: GCACATCAAGACGGGAATCAAGCAAGACCAAGGCCC...AGAGAAACTTACTAAGTTCCACTTGGGTGCAGAGCCACTCACAGTTGCCGAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CAA 90 bp GTCCCGAATCCACTGCTACTGTCATGCTATGTAGACAGTTGTGTAGACACATCTGAAATGAGTCACGCCTaGGAGCTGAGGTCCCGAGTG +
Preference number: 5 (lower is better)
Translates to: VPNPLLLSCYVDSCVDTSEMSHA*ELRSRV
Trigger: CACTCGGGACCTCAGCTCCAAGGCGTGACTCATTTC...AGATGTGTCTACACAACTGTCTACATAGCATGACAGTAGCAGTGGATTCGGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CAA 90 bp GGTCCCGAGTGTGCAGGAAGGAGCTTTGGAAACATGTACAGGTGGGTCCCGAATATAACACGGACTAATTaGGACACTTTCCCCAAACCG +
Preference number: 5 (lower is better)
Translates to: GPECAGRSFGNMYRWVPNITRTN*DTFPKP
Trigger: CGGTTTGGGGAAAGTGTCCAAATTAGTCCGTGTTAT...ATTCGGGACCCACCTGTACATGTTTCCAAAGCTCCTTCCTGCACACTCGGGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CAA 90 bp GTCCCGAGTGTGCAGGAAGGAGCTTTGGAAACATGTACAGGTGGGTCCCGAATCCCGACTTTTAGCATTTaGGCAATCAGATGTCAGAGT +
Preference number: 5 (lower is better)
Translates to: VPSVQEGALETCTGGSRIPTFSI*AIRCQS
Trigger: ACTCTGACATCTGATTGCCAAAATGCTAAAAGTCGG...GATTCGGGACCCACCTGTACATGTTTCCAAAGCTCCTTCCTGCACACTCGGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CAA 90 bp CACCTGCAAGCAAGCACCAACTTAAATGTATGCCCCAGGTGCCTCATTTGTCTCTTCAGCATGGACTGCTaGATCCAGATGAAGGGTAGC +
Preference number: 5 (lower is better)
Translates to: HLQASTNLNVCPRCLICLFSMDC*IQMKGS
Trigger: GCTACCCTTCATCTGGATCAAGCAGTCCATGCTGAA...GAGACAAATGAGGCACCTGGGGCATACATTTAAGTTGGTGCTTGCTTGCAGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CAA 90 bp ATGTCTGAACTAGCTCAGTGTCTTTATAGCACGTTCCTAGCCCAGAGTTTCCCATTGAGAAGCTTCACGTaGTCCCCATGGCTGGCTCCT +
Preference number: 5 (lower is better)
Translates to: MSELAQCLYSTFLAQSFPLRSFT*SPWLAP
Trigger: AGGAGCCAGCCATGGGGACAACGTGAAGCTTCTCAA...TGGGAAACTCTGGGCTAGGAACGTGCTATAAAGACACTGAGCTAGTTCAGACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CAA 90 bp AATGAACTCTGGCATTTTGGGTGCTGTACATGCTTCACAATAATGCATCAGGTGGGAACACGGAGGGCCTaGCTTGCAGCATGGTGGAAG +
Preference number: 5 (lower is better)
Translates to: NELWHFGCCTCFTIMHQVGTRRA*LAAWWK
Trigger: CTTCCACCATGCTGCAAGCAAGGCCCTCCGTGTTCC...CACCTGATGCATTATTGTGAAGCATGTACAGCACCCAAAATGCCAGAGTTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000592272.5
CDS-3UTR CAA 90 bp AATTTCAGTAGATCTCCCGACCTGACCCAGTTTCCACAGACAAGTGTTTCAGCACTGCTCCGCGGAGCTTaGCATAAGCAGCCTGAGAAT +
Preference number: 5 (lower is better)
Translates to: NFSRSPDLTQFPQTSVSALLRGA*HKQPEN
Trigger: ATTCTCAGGCTGCTTATGCAAAGCTCCGCGGAGCAG...TGCTGAAACACTTGTCTGTGGAAACTGGGTCAGGTCGGGAGATCTACTGAAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CAA 90 bp AATTTCAGTAGATCTCCCGACCTGACCCAGTTTCCACAGACAAGTGTTTCAGCAGCTGGCAGTTGGGTCTaGGGCCAAACAGGTCATTTC +
Preference number: 5 (lower is better)
Translates to: NFSRSPDLTQFPQTSVSAAGSWV*GQTGHF
Trigger: GAAATGACCTGTTTGGCCCAAGACCCAACTGCCAGC...TGCTGAAACACTTGTCTGTGGAAACTGGGTCAGGTCGGGAGATCTACTGAAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CAA 90 bp ATTAATAGGCAGTGGGACAACATGATTCCGGGATGCAGCCTGCCTCTGCAACCCGTTGGAATAGTCGCGTaGTTCATCATCATCAGGACT +
Preference number: 5 (lower is better)
Translates to: INRQWDNMIPGCSLPLQPVGIVA*FIIIRT
Trigger: AGTCCTGATGATGATGAACAACGCGACTATTCCAAC...GGGTTGCAGAGGCAGGCTGCATCCCGGAATCATGTTGTCCCACTGCCTATTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CAA 90 bp CATTCGGCAACTGTGAGTGGCTCTGCACCCAAGTGGAACTTAGTAAGTTTCTCTCAGCCCATGCATTTTTaGGCCAATCCAGGTCCGGAT +
Preference number: 5 (lower is better)
Translates to: HSATVSGSAPKWNLVSFSQPMHF*ANPGPD
Trigger: ATCCGGACCTGGATTGGCCAAAAAATGCATGGGCTG...AGAGAAACTTACTAAGTTCCACTTGGGTGCAGAGCCACTCACAGTTGCCGAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CAA 90 bp GGTCCCGAGTGTGCAGGAAGGAGCTTTGGAAACATGTACAGGTGGGTCCCGAATCAACATACTGCTTACTaGATGCCATGGATTCAAGAG +
Preference number: 5 (lower is better)
Translates to: GPECAGRSFGNMYRWVPNQHTAY*MPWIQE
Trigger: CTCTTGAATCCATGGCATCAAGTAAGCAGTATGTTG...ATTCGGGACCCACCTGTACATGTTTCCAAAGCTCCTTCCTGCACACTCGGGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CAA 90 bp AATTTCAGTAGATCTCCCGACCTGACCCAGTTTCCACAGACAAGTGTTTCAGCACCAGGAGGCCGTCACTaGGTTGAAAGGAAGTTAGGC +
Preference number: 5 (lower is better)
Translates to: NFSRSPDLTQFPQTSVSAPGGRH*VERKLG
Trigger: GCCTAACTTCCTTTCAACCAAGTGACGGCCTCCTGG...TGCTGAAACACTTGTCTGTGGAAACTGGGTCAGGTCGGGAGATCTACTGAAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CAA 90 bp TTTTGGCCAATCCAGGTCCGGATACTGCCCCGAAGGAACTCTGCTGTTGGAATATGGACTCCAGAAGCCTaGGTTAGCAGCATGAAAATC +
Preference number: 5 (lower is better)
Translates to: FWPIQVRILPRRNSAVGIWTPEA*VSSMKI
Trigger: GATTTTCATGCTGCTAACCAAGGCTTCTGGAGTCCA...TATTCCAACAGCAGAGTTCCTTCGGGGCAGTATCCGGACCTGGATTGGCCAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000590884.5
CDS TCA 90 bp TCAAGAGAGGATGAAACGTGGGTGACTCTGTCATGTCAGGCACAGTaGCGGAGAAGGGAACAGCTGGACAATTCGGCTGTATTCCATAAT +
Preference number: 5 (lower is better)
Translates to: SREDETWVTLSCQAQ*RRREQLDNSAVFHN
Trigger: ATTATGGAATACAGCCGAATTGTCCAGCTGTTCCCTTCTCCGTCACTGTGCCTGACATGACAGAGTCACCCACGTTTCATCCTCTCTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000587974.1
CDS TCA 90 bp AAAGGAAGGAGTGATGTTGCCTGCCACAATCCAGCTTACCAAAGATaGGAGCAGACTCCGGTCACAGTGGTAACCCAAGGCATTCTTATG +
Preference number: 5 (lower is better)
Translates to: KGRSDVACHNPAYQR*EQTPVTVVTQGILM
Trigger: CATAAGAATGCCTTGGGTTACCACTGTGACCGGAGTCTGCTCTCATCTTTGGTAAGCTGGATTGTGGCAGGCAACATCACTCCTTCCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000282041.11
ENST00000585906.5
ENST00000587884.1
ENST00000587974.1
ENST00000590884.5
ENST00000592272.5
CDS GCA 90 bp CTGTTCTCAAATGTCTTGACTGGACCAGAATTCCCAATAGTGGGATaGCTTCTGCACAGAACTTCTCAATGCTGTGGCCCACAGCTGTCA +
Preference number: 5 (lower is better)
Translates to: LFSNVLTGPEFPIVG*LLHRTSQCCGPQLS
Trigger: TGACAGCTGTGGGCCACAGCATTGAGAAGTTCTGTGCAGAAGGCATCCCACTATTGGGAATTCTGGTCCAGTCAAGACATTTGAGAACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000587974.1
CDS-3UTR CAA 90 bp TCACCTTCATTTGAAAGGAACGAGGACATGAACACTCTTGGCTTGTATGACATGCTTGTGGGTGACCTGTaGTGTGACACCCTGAGGGAC +
Preference number: 5 (lower is better)
Translates to: SPSFERNEDMNTLGLYDMLVGDL*CDTLRD
Trigger: GTCCCTCAGGGTGTCACACAACAGGTCACCCACAAG...CATGTCATACAAGCCAAGAGTGTTCATGTCCTCGTTCCTTTCAAATGAAGGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CAA 90 bp CATTCGGCAACTGTGAGTGGCTCTGCACCCAAGTGGAACTTAGTAAGTTTCTCTGAGGAAGAGGATAGGTaGTTCTCGGTACCAGAGATG +
Preference number: 5 (lower is better)
Translates to: HSATVSGSAPKWNLVSFSEEEDR*FSVPEM
Trigger: CATCTCTGGTACCGAGAACAACCTATCCTCTTCCTC...AGAGAAACTTACTAAGTTCCACTTGGGTGCAGAGCCACTCACAGTTGCCGAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CAA 90 bp TGCTGTACATGCTTCACAATAATGCATCAGGTGCAACCAAAGGGCTCCTGCATCGAGGAAGAGGATAGGTaGTTCTCGGTACCAGAGATG +
Preference number: 5 (lower is better)
Translates to: CCTCFTIMHQVQPKGSCIEEEDR*FSVPEM
Trigger: CATCTCTGGTACCGAGAACAACCTATCCTCTTCCTC...GATGCAGGAGCCCTTTGGTTGCACCTGATGCATTATTGTGAAGCATGTACAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000592272.5
CDS-3UTR CAA 90 bp AATGACAGATTCTGTCAGGACGGAGTCATTCTGCTCTGTCTGAATGAGGGAGAGAAGGAAGGAGTGATGTaGCCTGCCACAATCCAGCTT +
Preference number: 5 (lower is better)
Translates to: NDRFCQDGVILLCLNEGEKEGVM*PATIQL
Trigger: AAGCTGGATTGTGGCAGGCAACATCACTCCTTCCTT...CTCTCCCTCATTCAGACAGAGCAGAATGACTCCGTCCTGACAGAATCTGTCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CAA 90 bp AGGCAGACAATCATGCTGCGGGTTTCTGGGTGGGGACTGGAATTCCAGGCATCAGATTCTGCATCACTTTaGCTAGCCTGTGAATATCAT +
Preference number: 5 (lower is better)
Translates to: RQTIMLRVSGWGLEFQASDSASL*LACEYH
Trigger: ATGATATTCACAGGCTAGCAAAAGTGATGCAGAATC...TGATGCCTGGAATTCCAGTCCCCACCCAGAAACCCGCAGCATGATTGTCTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CAA 90 bp ATGTCTGAACTAGCTCAGTGTCTTTATAGCACGTTCCTAGCCCAGAGTTTCCCAGGTTCTGGCCTGCTGTaGCAACAGATTCAGGTCTGT +
Preference number: 5 (lower is better)
Translates to: MSELAQCLYSTFLAQSFPGSGLL*QQIQVC
Trigger: ACAGACCTGAATCTGTTGCAACAGCAGGCCAGAACC...TGGGAAACTCTGGGCTAGGAACGTGCTATAAAGACACTGAGCTAGTTCAGACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CAA 90 bp CTCCGCGGAGCTTTGCATAAGCAGCCTGAGAATGTCACTGTACTGGTCAGGAAACATACTGCTTTGGCATaGTGTCTAACAGCTCACCAT +
Preference number: 5 (lower is better)
Translates to: LRGALHKQPENVTVLVRKHTALA*CLTAHH
Trigger: ATGGTGAGCTGTTAGACACAATGCCAAAGCAGTATG...TTTCCTGACCAGTACAGTGACATTCTCAGGCTGCTTATGCAAAGCTCCGCGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000590884.5
CDS-3UTR CAA 90 bp CATGCTGCGGGTTTCTGGGTGGGGACTGGAATTCCAGGCATCAGAGAGCACACTTGTTTAAGATCGAACTaGGTTAGCAGCATGAAAATC +
Preference number: 5 (lower is better)
Translates to: HAAGFWVGTGIPGIREHTCLRSN*VSSMKI
Trigger: GATTTTCATGCTGCTAACCAAGTTCGATCTTAAACA...AGTGTGCTCTCTGATGCCTGGAATTCCAGTCCCCACCCAGAAACCCGCAGCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000592272.5
CDS-3UTR CAA 90 bp GTAAAGAGTCAAGTAACTGCCCAAGGTGAGGCACTCCTGCAGGAACTCTTCCATGTCTCCATTACCTGCTaGTCTGACAAGAGAGCATCA +
Preference number: 5 (lower is better)
Translates to: VKSQVTAQGEALLQELFHVSITC*SDKRAS
Trigger: TGATGCTCTCTTGTCAGACAAGCAGGTAATGGAGAC...ATGGAAGAGTTCCTGCAGGAGTGCCTCACCTTGGGCAGTTACTTGACTCTTTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CAA 90 bp AATTTCAGTAGATCTCCCGACCTGACCCAGTTTCCACAGACAAGTGTTTCAGCAACAGCTGCACAATGCTaGAGGCCACCACAGTATCAC +
Preference number: 5 (lower is better)
Translates to: NFSRSPDLTQFPQTSVSATAAQC*RPPQYH
Trigger: GTGATACTGTGGTGGCCTCAAGCATTGTGCAGCTGT...TGCTGAAACACTTGTCTGTGGAAACTGGGTCAGGTCGGGAGATCTACTGAAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CAA 90 bp ACCACAAAAACAGCTTTGCCTCTTCCTCCACGGAGCTTGGGTACACCTGTTCCAGTTGGAATAGTCGCGTaGTTCATCATCATCAGGACT +
Preference number: 5 (lower is better)
Translates to: TTKTALPLPPRSLGTPVPVGIVA*FIIIRT
Trigger: AGTCCTGATGATGATGAACAACGCGACTATTCCAAC...TGGAACAGGTGTACCCAAGCTCCGTGGAGGAAGAGGCAAAGCTGTTTTTGTGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CAA 90 bp TTTTGGGTGCTGTACATGCTTCACAATAATGCATCAGGTGCAACCAAAGGGCTCCAGCCCATGCATTTTTaGGCCAATCCAGGTCCGGAT +
Preference number: 5 (lower is better)
Translates to: FWVLYMLHNNASGATKGLQPMHF*ANPGPD
Trigger: ATCCGGACCTGGATTGGCCAAAAAATGCATGGGCTG...GAGCCCTTTGGTTGCACCTGATGCATTATTGTGAAGCATGTACAGCACCCAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000592272.5
CDS-3UTR CAA 90 bp AATTTCAGTAGATCTCCCGACCTGACCCAGTTTCCACAGACAAGTGTTTCAGCAGGAGAGCTGAAGGACTaGGTGCCACCACAAAAACAG +
Preference number: 5 (lower is better)
Translates to: NFSRSPDLTQFPQTSVSAGELKD*VPPQKQ
Trigger: CTGTTTTTGTGGTGGCACCAAGTCCTTCAGCTCTCC...TGCTGAAACACTTGTCTGTGGAAACTGGGTCAGGTCGGGAGATCTACTGAAATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CAA 90 bp ATTAATAGGCAGTGGGACAACATGATTCCGGGATGCAGCCTGCCTCTGCAACCCCAACATACTGCTTACTaGATGCCATGGATTCAAGAG +
Preference number: 5 (lower is better)
Translates to: INRQWDNMIPGCSLPLQPQHTAY*MPWIQE
Trigger: CTCTTGAATCCATGGCATCAAGTAAGCAGTATGTTG...GGGTTGCAGAGGCAGGCTGCATCCCGGAATCATGTTGTCCCACTGCCTATTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CAA 90 bp GTCCCGAATCCACTGCTACTGTCATGCTATGTAGACAGTTGTGTAGACACATCTGTGCAGGAAGGAGCTTaGGAAACATGTACAGGTGGG +
Preference number: 5 (lower is better)
Translates to: VPNPLLLSCYVDSCVDTSVQEGA*ETCTGG
Trigger: CCCACCTGTACATGTTTCCAAAGCTCCTTCCTGCAC...AGATGTGTCTACACAACTGTCTACATAGCATGACAGTAGCAGTGGATTCGGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS TCA 90 bp CTAACACCAGCGGGGCATCGAAGAATATGGTTTAGAAGGAAGAGGTaGTCTCCAGGACAGCCAACTCTTTGTAGCACGGATACCAATTTC +
Preference number: 5 (lower is better)
Translates to: LTPAGHRRIWFRRKR*SPGQPTLCSTDTNF
Trigger: GAAATTGGTATCCGTGCTACAAAGAGTTGGCTGTCCTGGAGATCACCTCTTCCTTCTAAACCATATTCTTCGATGCCCCGCTGGTGTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000587974.1
CDS TCA 90 bp ATGTGCAGGCAAACTTCTAACCCTTCATTGTATATACTGACCTGCTaGGCTTTGGGGGTCAGATGTAATTCAGAGCCAGGCCTCAAACGG +
Preference number: 5 (lower is better)
Translates to: MCRQTSNPSLYILTC*ALGVRCNSEPGLKR
Trigger: CCGTTTGAGGCCTGGCTCTGAATTACATCTGACCCCCAAAGCTCAGCAGGTCAGTATATACAATGAAGGGTTAGAAGTTTGCCTGCACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587262.1
CDS CCA 90 bp GACATTTGTTCCTCCTTAAACTGCCACAGCCGACTTTTAGCATTTTaGCAATCAGATGTCAGAGTAAGCAGCTCAGCTTCAGCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: DICSSLNCHSRLLAF*QSDVRVSSSASASS
Trigger: GCTGCTGGCTGAAGCTGAGCTGCTTACTCTGACATCTGATTGCCAAAATGCTAAAAGTCGGCTGTGGCAGTTTAAGGAGGAACAAATGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000587974.1
CDS-3UTR CAA 90 bp CATTCGGCAACTGTGAGTGGCTCTGCACCCAAGTGGAACTTAGTAAGTTTCTCTCTCAGATGCAGAAGGTaGCCAAAGATACAAAGGCAG +
Preference number: 5 (lower is better)
Translates to: HSATVSGSAPKWNLVSFSLRCRR*PKIQRQ
Trigger: CTGCCTTTGTATCTTTGGCAACCTTCTGCATCTGAG...AGAGAAACTTACTAAGTTCCACTTGGGTGCAGAGCCACTCACAGTTGCCGAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CAA 90 bp CACCTGCAAGCAAGCACCAACTTAAATGTATGCCCCAGGTGCCTCATTTGTCTCCTGTTCTCAAATGTCTaGACTGGACCAGAATTCCCA +
Preference number: 5 (lower is better)
Translates to: HLQASTNLNVCPRCLICLLFSNV*TGPEFP
Trigger: TGGGAATTCTGGTCCAGTCAAGACATTTGAGAACAG...GAGACAAATGAGGCACCTGGGGCATACATTTAAGTTGGTGCTTGCTTGCAGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CAA 90 bp GCAGCACTTTCATTTCATTCCTTAAAGTCTGTTCGCTGTTTAAACACTGAAGCAGGAACACGGAGGGCCTaGCTTGCAGCATGGTGGAAG +
Preference number: 5 (lower is better)
Translates to: AALSFHSLKSVRCLNTEAGTRRA*LAAWWK
Trigger: CTTCCACCATGCTGCAAGCAAGGCCCTCCGTGTTCC...TGCTTCAGTGTTTAAACAGCGAACAGACTTTAAGGAATGAAATGAAAGTGCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CAA 90 bp GTAGGAATAGAAAGGCCCGCAGACACTTTTAGGAGCTTCATGATTAATTCAGCAAGCCTCACCAGCTCCTaGTGCAGTTCTGGTGAAGTC +
Preference number: 5 (lower is better)
Translates to: VGIERPADTFRSFMINSASLTSS*CSSGEV
Trigger: GACTTCACCAGAACTGCACAAGGAGCTGGTGAGGCT...TGCTGAATTAATCATGAAGCTCCTAAAAGTGTCTGCGGGCCTTTCTATTCCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CAA 90 bp CTAACCCAGTTGACTTCACAGAGTACAGACCCCAAAAATAAGAAACAGCTCTTGGACAACTGCGGCTCCTaGGCATTTCTTACCGCTGCT +
Preference number: 5 (lower is better)
Translates to: LTQLTSQSTDPKNKKQLLDNCGS*AFLTAA
Trigger: AGCAGCGGTAAGAAATGCCAAGGAGCCGCAGTTGTC...CAAGAGCTGTTTCTTATTTTTGGGGTCTGTACTCTGTGAAGTCAACTGGGTTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CAA 90 bp AGTGTTAGAAAGGCGCTTCCTTACCTGTTAGACAAAGGCGACTTCCGGCCAAACATGAACTCTGGCATTTaGGGTGCTGTACATGCTTCA +
Preference number: 5 (lower is better)
Translates to: SVRKALPYLLDKGDFRPNMNSGI*GAVHAS
Trigger: TGAAGCATGTACAGCACCCAAAATGCCAGAGTTCAT...GTTTGGCCGGAAGTCGCCTTTGTCTAACAGGTAAGGAAGCGCCTTTCTAACACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000592272.5
CDS-3UTR CAA 90 bp AGCCACGAGGTTCTGCCTGCTCTGAACCAAGAGCAGAATTCGAATGACAGATTCATGAACTCTGGCATTTaGGGTGCTGTACATGCTTCA +
Preference number: 5 (lower is better)
Translates to: SHEVLPALNQEQNSNDRFMNSGI*GAVHAS
Trigger: TGAAGCATGTACAGCACCCAAAATGCCAGAGTTCAT...GAATCTGTCATTCGAATTCTGCTCTTGGTTCAGAGCAGGCAGAACCTCGTGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000592272.5
CDS-3UTR CAA 90 bp GTCCCGAATCCACTGCTACTGTCATGCTATGTAGACAGTTGTGTAGACACATCTACCTGTTCCAGCCACTaGCTTAAGATGAGCAGCACT +
Preference number: 5 (lower is better)
Translates to: VPNPLLLSCYVDSCVDTSTCSSH*LKMSST
Trigger: AGTGCTGCTCATCTTAAGCAAGTGGCTGGAACAGGT...AGATGTGTCTACACAACTGTCTACATAGCATGACAGTAGCAGTGGATTCGGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CAA 90 bp CACCTGCAAGCAAGCACCAACTTAAATGTATGCCCCAGGTGCCTCATTTGTCTCTGGATGGAAATTGACTaGTCATCATCTCTACTGCCC +
Preference number: 5 (lower is better)
Translates to: HLQASTNLNVCPRCLICLWMEID*SSSLLP
Trigger: GGGCAGTAGAGATGATGACAAGTCAATTTCCATCCA...GAGACAAATGAGGCACCTGGGGCATACATTTAAGTTGGTGCTTGCTTGCAGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CAA 90 bp CACCTGCAAGCAAGCACCAACTTAAATGTATGCCCCAGGTGCCTCATTTGTCTCTCTGAGACGGACATTTaGTGGCCTGTAAAACTCAAG +
Preference number: 5 (lower is better)
Translates to: HLQASTNLNVCPRCLICLSETDI*WPVKLK
Trigger: CTTGAGTTTTACAGGCCACAAAATGTCCGTCTCAGA...GAGACAAATGAGGCACCTGGGGCATACATTTAAGTTGGTGCTTGCTTGCAGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CAA 90 bp TCACCTTCATTTGAAAGGAACGAGGACATGAACACTCTTGGCTTGTATGACATGCCAGGAGGCCGTCACTaGGTTGAAAGGAAGTTAGGC +
Preference number: 5 (lower is better)
Translates to: SPSFERNEDMNTLGLYDMPGGRH*VERKLG
Trigger: GCCTAACTTCCTTTCAACCAAGTGACGGCCTCCTGG...CATGTCATACAAGCCAAGAGTGTTCATGTCCTCGTTCCTTTCAAATGAAGGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CAA 90 bp TCACCTTCATTTGAAAGGAACGAGGACATGAACACTCTTGGCTTGTATGACATGCAAGGAAGCACTCTCTaGGCACCTGCAAGCAAGCAC +
Preference number: 5 (lower is better)
Translates to: SPSFERNEDMNTLGLYDMQGSTL*APASKH
Trigger: GTGCTTGCTTGCAGGTGCCAAGAGAGTGCTTCCTTG...CATGTCATACAAGCCAAGAGTGTTCATGTCCTCGTTCCTTTCAAATGAAGGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CAA 90 bp AATGACAGATTCTGTCAGGACGGAGTCATTCTGCTCTGTCTGAATGAGGGAGAGTCGTTCCACCTTTCGTaGTCCTCTAAAACCAGGATC +
Preference number: 5 (lower is better)
Translates to: NDRFCQDGVILLCLNEGESFHLS*SSKTRI
Trigger: GATCCTGGTTTTAGAGGACAACGAAAGGTGGAACGA...CTCTCCCTCATTCAGACAGAGCAGAATGACTCCGTCCTGACAGAATCTGTCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590884.5
CDS TCA 90 bp ATTTCAGCTGGCAACTGGGGATACAGTTTCTTCACTCTAGGTGTCTaGAAACCATGTTTGGCTGGGCAAGAACTCTGCAAGCCAACATTC +
Preference number: 5 (lower is better)
Translates to: ISAGNWGYSFFTLGV*KPCLAGQELCKPTF
Trigger: GAATGTTGGCTTGCAGAGTTCTTGCCCAGCCAAACATGGTTTTCAGACACCTAGAGTGAAGAAACTGTATCCCCAGTTGCCAGCTGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000587974.1
CDS CCA 90 bp AAAGCAGAGTTTATCACCAATTCCCCTTCAATAACTCTCCGGAGCTaGGAGTCCTCTTCAAAGATGGATTCCATGTTGAGCACTGTCCAG +
Preference number: 5 (lower is better)
Translates to: KAEFITNSPSITLRS*ESSSKMDSMLSTVQ
Trigger: CTGGACAGTGCTCAACATGGAATCCATCTTTGAAGAGGACTCCCAGCTCCGGAGAGTTATTGAAGGGGAATTGGTGATAAACTCTGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000282041.11
ENST00000585906.5
ENST00000587884.1
ENST00000587974.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CAA 90 bp ACAGATCCCTCTGAGACGGACATTTTGTGGCCTGTAAAACTCAAGAGACTAAACGGCCTTGCTGGTGAATaGCTGAAGATCTCAGAACAG +
Preference number: 5 (lower is better)
Translates to: TDPSETDILWPVKLKRLNGLAGE*LKISEQ
Trigger: CTGTTCTGAGATCTTCAGCAATTCACCAGCAAGGCC...GTTTAGTCTCTTGAGTTTTACAGGCCACAAAATGTCCGTCTCAGAGGGATCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CAA 90 bp AATGAACTCTGGCATTTTGGGTGCTGTACATGCTTCACAATAATGCATCAGGTGGGCTTTCTTCAGAGCTaGGTCAGGGGTGAAAGCAGA +
Preference number: 5 (lower is better)
Translates to: NELWHFGCCTCFTIMHQVGFLQS*VRGESR
Trigger: TCTGCTTTCACCCCTGACCAAGCTCTGAAGAAAGCC...CACCTGATGCATTATTGTGAAGCATGTACAGCACCCAAAATGCCAGAGTTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000592272.5
CDS-3UTR CAA 90 bp GTAGGAATAGAAAGGCCCGCAGACACTTTTAGGAGCTTCATGATTAATTCAGCAGGCTTTCTTCAGAGCTaGGTCAGGGGTGAAAGCAGA +
Preference number: 5 (lower is better)
Translates to: VGIERPADTFRSFMINSAGFLQS*VRGESR
Trigger: TCTGCTTTCACCCCTGACCAAGCTCTGAAGAAAGCC...TGCTGAATTAATCATGAAGCTCCTAAAAGTGTCTGCGGGCCTTTCTATTCCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CAA 90 bp CTGCCCCGAAGGAACTCTGCTGTTGGAATAGTCGCGTTGTTCATCATCATCAGGGATTCTGCATCACTTTaGCTAGCCTGTGAATATCAT +
Preference number: 5 (lower is better)
Translates to: LPRRNSAVGIVALFIIIRDSASL*LACEYH
Trigger: ATGATATTCACAGGCTAGCAAAAGTGATGCAGAATC...CCTGATGATGATGAACAACGCGACTATTCCAACAGCAGAGTTCCTTCGGGGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CAA 90 bp GGTCCGGATACTGCCCCGAAGGAACTCTGCTGTTGGAATAGTCGCGTTGTTCATTGTTTAAGATCGAACTaGGTTAGCAGCATGAAAATC +
Preference number: 5 (lower is better)
Translates to: GPDTAPKELCCWNSRVVHCLRSN*VSSMKI
Trigger: GATTTTCATGCTGCTAACCAAGTTCGATCTTAAACA...ATGAACAACGCGACTATTCCAACAGCAGAGTTCCTTCGGGGCAGTATCCGGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000592272.5
CDS-3UTR CAA 90 bp AATTTCAGTAGATCTCCCGACCTGACCCAGTTTCCACAGACAAGTGTTTCAGCAGTCTCCATTACCTGCTaGTCTGACAAGAGAGCATCA +
Preference number: 5 (lower is better)
Translates to: NFSRSPDLTQFPQTSVSAVSITC*SDKRAS
Trigger: TGATGCTCTCTTGTCAGACAAGCAGGTAATGGAGAC...TGCTGAAACACTTGTCTGTGGAAACTGGGTCAGGTCGGGAGATCTACTGAAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CAA 90 bp AGCACACTCTGGTACGACACAATATCCACAAGATGCCATGAAAGTGAGCTTGTCGTCTCCATTACCTGCTaGTCTGACAAGAGAGCATCA +
Preference number: 5 (lower is better)
Translates to: STLWYDTISTRCHESELVVSITC*SDKRAS
Trigger: TGATGCTCTCTTGTCAGACAAGCAGGTAATGGAGAC...GACAAGCTCACTTTCATGGCATCTTGTGGATATTGTGTCGTACCAGAGTGTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CAA 90 bp GAGGAATTGAACCATCTGATGAGTAAAAGCTTGGCATTTTGGAACTGCATCAAGTTTTCCTGCTGGCAGTaGGGTCTTGGGCCAAACAGG +
Preference number: 5 (lower is better)
Translates to: EELNHLMSKSLAFWNCIKFSCWQ*GLGPNR
Trigger: CCTGTTTGGCCCAAGACCCAACTGCCAGCAGGAAAA...CTTGATGCAGTTCCAAAATGCCAAGCTTTTACTCATCAGATGGTTCAATTCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CAA 90 bp CATTCGGCAACTGTGAGTGGCTCTGCACCCAAGTGGAACTTAGTAAGTTTCTCTATGAACTCTGGCATTTaGGGTGCTGTACATGCTTCA +
Preference number: 5 (lower is better)
Translates to: HSATVSGSAPKWNLVSFSMNSGI*GAVHAS
Trigger: TGAAGCATGTACAGCACCCAAAATGCCAGAGTTCAT...AGAGAAACTTACTAAGTTCCACTTGGGTGCAGAGCCACTCACAGTTGCCGAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CAA 90 bp ATGTCTGAACTAGCTCAGTGTCTTTATAGCACGTTCCTAGCCCAGAGTTTCCCAAGCACACTAACCCAGTaGACTTCACAGAGTACAGAC +
Preference number: 5 (lower is better)
Translates to: MSELAQCLYSTFLAQSFPSTLTQ*TSQSTD
Trigger: GTCTGTACTCTGTGAAGTCAACTGGGTTAGTGTGCT...TGGGAAACTCTGGGCTAGGAACGTGCTATAAAGACACTGAGCTAGTTCAGACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CAA 90 bp ACAGATCCCTCTGAGACGGACATTTTGTGGCCTGTAAAACTCAAGAGACTAAACGAAGCTTTTCCCATCTaGAAGGCAATGGCCAGGATG +
Preference number: 5 (lower is better)
Translates to: TDPSETDILWPVKLKRLNEAFPI*KAMARM
Trigger: CATCCTGGCCATTGCCTTCAAGATGGGAAAAGCTTC...GTTTAGTCTCTTGAGTTTTACAGGCCACAAAATGTCCGTCTCAGAGGGATCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CAA 90 bp CATTCGGCAACTGTGAGTGGCTCTGCACCCAAGTGGAACTTAGTAAGTTTCTCTATGCTATGTAGACAGTaGTGTAGACACATCTGGCAG +
Preference number: 5 (lower is better)
Translates to: HSATVSGSAPKWNLVSFSMLCRQ*CRHIWQ
Trigger: CTGCCAGATGTGTCTACACAACTGTCTACATAGCAT...AGAGAAACTTACTAAGTTCCACTTGGGTGCAGAGCCACTCACAGTTGCCGAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CAA 90 bp GTCCCGAATCCACTGCTACTGTCATGCTATGTAGACAGTTGTGTAGACACATCTACGATTCCAGGACATTaGCTTCCTGCTCCAGAAGAA +
Preference number: 5 (lower is better)
Translates to: VPNPLLLSCYVDSCVDTSTIPGH*LPAPEE
Trigger: TTCTTCTGGAGCAGGAAGCAAATGTCCTGGAATCGT...AGATGTGTCTACACAACTGTCTACATAGCATGACAGTAGCAGTGGATTCGGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS TCA 90 bp GGCCTTGCTGGTGAATTGCTGAAGATCTCAGAACAGCTGAACTACTaGGCAATGCATAGATGTAAGACTCCACTTGCAATCTTGAGAGCA +
Preference number: 5 (lower is better)
Translates to: GLAGELLKISEQLNY*AMHRCKTPLAILRA
Trigger: TGCTCTCAAGATTGCAAGTGGAGTCTTACATCTATGCATTGCTCAGTAGTTCAGCTGTTCTGAGATCTTCAGCAATTCACCAGCAAGGCC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000587974.1
CDS TCA 90 bp GGATACAGACAGTTAACGAGAAGAGCCAAGAAGCTTTTCCCATCTTaGAGGCAATGGCCAGGATGCCTTATAAATTGGGTGGCTTGCAAT +
Preference number: 5 (lower is better)
Translates to: GYRQLTRRAKKLFPS*RQWPGCLINWVACN
Trigger: ATTGCAAGCCACCCAATTTATAAGGCATCCTGGCCATTGCCTTCAAGATGGGAAAAGCTTCTTGGCTCTTCTCGTTAACTGTCTGTATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS CCA 90 bp AAGTATAAGAATGAAGGGCCAGGGTCTGGTGGAGGTGCTCAGATTTaGCATCGAATAGCTTCTTTAGCTCCACCAGTGCATTTTCATTCA +
Preference number: 5 (lower is better)
Translates to: KYKNEGPGSGGGAQI*HRIASLAPPVHFHS
Trigger: TGAATGAAAATGCACTGGTGGAGCTAAAGAAGCTATTCGATGCCAAATCTGAGCACCTCCACCAGACCCTGGCCCTTCATTCTTATACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000587974.1
CDS-3UTR CAA 90 bp GTCCCGAATCCACTGCTACTGTCATGCTATGTAGACAGTTGTGTAGACACATCTGCTGAAAACTTTCACTaGATCTGCACAGATACCCTG +
Preference number: 5 (lower is better)
Translates to: VPNPLLLSCYVDSCVDTSAENFH*ICTDTL
Trigger: CAGGGTATCTGTGCAGATCAAGTGAAAGTTTTCAGC...AGATGTGTCTACACAACTGTCTACATAGCATGACAGTAGCAGTGGATTCGGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CAA 90 bp AATTTCAGTAGATCTCCCGACCTGACCCAGTTTCCACAGACAAGTGTTTCAGCATGGAGGTGCTCAGATTaGGCATCGAATAGCTTCTTT +
Preference number: 5 (lower is better)
Translates to: NFSRSPDLTQFPQTSVSAWRCSD*ASNSFF
Trigger: AAAGAAGCTATTCGATGCCAAATCTGAGCACCTCCA...TGCTGAAACACTTGTCTGTGGAAACTGGGTCAGGTCGGGAGATCTACTGAAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CAA 90 bp ACAGATCCCTCTGAGACGGACATTTTGTGGCCTGTAAAACTCAAGAGACTAAACAACTCAGCTCGATTTTaGACAGGAGACATCAGCAGG +
Preference number: 5 (lower is better)
Translates to: TDPSETDILWPVKLKRLNNSARF*TGDISR
Trigger: CCTGCTGATGTCTCCTGTCAAAAATCGAGCTGAGTT...GTTTAGTCTCTTGAGTTTTACAGGCCACAAAATGTCCGTCTCAGAGGGATCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CAA 90 bp TCGGGCGGGTTAAAGACAATGATATCGTCTAAGAGCTTAGACATTTCCTGTTCTGAGGAAGAGGATAGGTaGTTCTCGGTACCAGAGATG +
Preference number: 5 (lower is better)
Translates to: SGGLKTMISSKSLDISCSEEEDR*FSVPEM
Trigger: CATCTCTGGTACCGAGAACAACCTATCCTCTTCCTC...AGAACAGGAAATGTCTAAGCTCTTAGACGATATCATTGTCTTTAACCCGCCCGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CAA 90 bp GCAGCACTTTCATTTCATTCCTTAAAGTCTGTTCGCTGTTTAAACACTGAAGCAGCTGGCAGTTGGGTCTaGGGCCAAACAGGTCATTTC +
Preference number: 5 (lower is better)
Translates to: AALSFHSLKSVRCLNTEAAGSWV*GQTGHF
Trigger: GAAATGACCTGTTTGGCCCAAGACCCAACTGCCAGC...TGCTTCAGTGTTTAAACAGCGAACAGACTTTAAGGAATGAAATGAAAGTGCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CAA 90 bp GCTTCACTTCCTTCCGTAAAACATGAAGCTGTTGGCTTATGGCTTCATTCTTATACAGCTGCACAATGCTaGAGGCCACCACAGTATCAC +
Preference number: 5 (lower is better)
Translates to: ASLPSVKHEAVGLWLHSYTAAQC*RPPQYH
Trigger: GTGATACTGTGGTGGCCTCAAGCATTGTGCAGCTGT...ATAAGAATGAAGCCATAAGCCAACAGCTTCATGTTTTACGGAAGGAAGTGAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587884.1
CDS-3UTR CAA 90 bp CATTCGGCAACTGTGAGTGGCTCTGCACCCAAGTGGAACTTAGTAAGTTTCTCTCTGATGAGTAAAAGCTaGGCATTTTGGAACTGCATC +
Preference number: 5 (lower is better)
Translates to: HSATVSGSAPKWNLVSFSLMSKS*AFWNCI
Trigger: GATGCAGTTCCAAAATGCCAAGCTTTTACTCATCAG...AGAGAAACTTACTAAGTTCCACTTGGGTGCAGAGCCACTCACAGTTGCCGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CAA 90 bp AATTTCAGTAGATCTCCCGACCTGACCCAGTTTCCACAGACAAGTGTTTCAGCAGGTGATTTTTCCATTTaGTTCCAGGGTGCTGAGGAA +
Preference number: 5 (lower is better)
Translates to: NFSRSPDLTQFPQTSVSAGDFSI*FQGAEE
Trigger: TTCCTCAGCACCCTGGAACAAAATGGAAAAATCACC...TGCTGAAACACTTGTCTGTGGAAACTGGGTCAGGTCGGGAGATCTACTGAAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CAA 90 bp AGCACACTCTGGTACGACACAATATCCACAAGATGCCATGAAAGTGAGCTTGTCGGTGATTTTTCCATTTaGTTCCAGGGTGCTGAGGAA +
Preference number: 5 (lower is better)
Translates to: STLWYDTISTRCHESELVGDFSI*FQGAEE
Trigger: TTCCTCAGCACCCTGGAACAAAATGGAAAAATCACC...GACAAGCTCACTTTCATGGCATCTTGTGGATATTGTGTCGTACCAGAGTGTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CAA 90 bp GTCCCGAATCCACTGCTACTGTCATGCTATGTAGACAGTTGTGTAGACACATCTTGGATGGAAATTGACTaGTCATCATCTCTACTGCCC +
Preference number: 5 (lower is better)
Translates to: VPNPLLLSCYVDSCVDTSWMEID*SSSLLP
Trigger: GGGCAGTAGAGATGATGACAAGTCAATTTCCATCCA...AGATGTGTCTACACAACTGTCTACATAGCATGACAGTAGCAGTGGATTCGGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CAA 90 bp GTCCCGAATCCACTGCTACTGTCATGCTATGTAGACAGTTGTGTAGACACATCTTCTGAGACGGACATTTaGTGGCCTGTAAAACTCAAG +
Preference number: 5 (lower is better)
Translates to: VPNPLLLSCYVDSCVDTSSETDI*WPVKLK
Trigger: CTTGAGTTTTACAGGCCACAAAATGTCCGTCTCAGA...AGATGTGTCTACACAACTGTCTACATAGCATGACAGTAGCAGTGGATTCGGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CAA 90 bp ATGTCTGAACTAGCTCAGTGTCTTTATAGCACGTTCCTAGCCCAGAGTTTCCCAGTTAGACATCTTTATTaGGTCCCGATGCCACTGTTG +
Preference number: 5 (lower is better)
Translates to: MSELAQCLYSTFLAQSFPVRHLY*VPMPLL
Trigger: CAACAGTGGCATCGGGACCAAATAAAGATGTCTAAC...TGGGAAACTCTGGGCTAGGAACGTGCTATAAAGACACTGAGCTAGTTCAGACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CAA 90 bp GTGCTGTACATGCTTCACAATAATGCATCAGGTGCAACCAAAGGGCTCCTGCATACAGCTTATCTTTCGTaGTCCTCTAAAACCAGGATC +
Preference number: 5 (lower is better)
Translates to: VLYMLHNNASGATKGLLHTAYLS*SSKTRI
Trigger: GATCCTGGTTTTAGAGGACAACGAAAGATAAGCTGT...ATGCAGGAGCCCTTTGGTTGCACCTGATGCATTATTGTGAAGCATGTACAGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592272.5
CDS TCA 90 bp ACTCTCCTGGTGAACATGAATAAGACACTAATGCATTCCTTTAGTTaGCACAGATCAGAGGGAATGCTTTCTGTCTGCTTAGACGCTCGG +
Preference number: 5 (lower is better)
Translates to: TLLVNMNKTLMHSFS*HRSEGMLSVCLDAR
Trigger: CCGAGCGTCTAAGCAGACAGAAAGCATTCCCTCTGATCTGTGTCAACTAAAGGAATGCATTAGTGTCTTATTCATGTTCACCAGGAGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000587974.1
CDS-3UTR CAA 90 bp GTCCCGAATCCACTGCTACTGTCATGCTATGTAGACAGTTGTGTAGACACATCTACTCCACTTGCAATCTaGAGAGCACAGAAGTATAAG +
Preference number: 5 (lower is better)
Translates to: VPNPLLLSCYVDSCVDTSTPLAI*RAQKYK
Trigger: CTTATACTTCTGTGCTCTCAAGATTGCAAGTGGAGT...AGATGTGTCTACACAACTGTCTACATAGCATGACAGTAGCAGTGGATTCGGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CAA 90 bp CACCTGCAAGCAAGCACCAACTTAAATGTATGCCCCAGGTGCCTCATTTGTCTCTCTCTTGAGGTCTTGTaGTTTCAGGTAAATAATCAC +
Preference number: 5 (lower is better)
Translates to: HLQASTNLNVCPRCLICLSLEVL*FQVNNH
Trigger: GTGATTATTTACCTGAAACAACAAGACCTCAAGAGA...GAGACAAATGAGGCACCTGGGGCATACATTTAAGTTGGTGCTTGCTTGCAGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CAA 90 bp AATGACAGATTCTGTCAGGACGGAGTCATTCTGCTCTGTCTGAATGAGGGAGAGGATTCTGCATCACTTTaGCTAGCCTGTGAATATCAT +
Preference number: 5 (lower is better)
Translates to: NDRFCQDGVILLCLNEGEDSASL*LACEYH
Trigger: ATGATATTCACAGGCTAGCAAAAGTGATGCAGAATC...CTCTCCCTCATTCAGACAGAGCAGAATGACTCCGTCCTGACAGAATCTGTCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CAA 90 bp ACAGATCCCTCTGAGACGGACATTTTGTGGCCTGTAAAACTCAAGAGACTAAACCATACTGCTTTGGCATaGTGTCTAACAGCTCACCAT +
Preference number: 5 (lower is better)
Translates to: TDPSETDILWPVKLKRLNHTALA*CLTAHH
Trigger: ATGGTGAGCTGTTAGACACAATGCCAAAGCAGTATG...GTTTAGTCTCTTGAGTTTTACAGGCCACAAAATGTCCGTCTCAGAGGGATCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CAA 90 bp AATGAACTCTGGCATTTTGGGTGCTGTACATGCTTCACAATAATGCATCAGGTGGTCTCCATTACCTGCTaGTCTGACAAGAGAGCATCA +
Preference number: 5 (lower is better)
Translates to: NELWHFGCCTCFTIMHQVVSITC*SDKRAS
Trigger: TGATGCTCTCTTGTCAGACAAGCAGGTAATGGAGAC...CACCTGATGCATTATTGTGAAGCATGTACAGCACCCAAAATGCCAGAGTTCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000592272.5
CDS-3UTR CAA 90 bp AATTTCAGTAGATCTCCCGACCTGACCCAGTTTCCACAGACAAGTGTTTCAGCACTGATGAGTAAAAGCTaGGCATTTTGGAACTGCATC +
Preference number: 5 (lower is better)
Translates to: NFSRSPDLTQFPQTSVSALMSKS*AFWNCI
Trigger: GATGCAGTTCCAAAATGCCAAGCTTTTACTCATCAG...TGCTGAAACACTTGTCTGTGGAAACTGGGTCAGGTCGGGAGATCTACTGAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CAA 90 bp GAATTGAACCATCTGATGAGTAAAAGCTTGGCATTTTGGAACTGCATCAAGATGCAGCCCATGCATTTTTaGGCCAATCCAGGTCCGGAT +
Preference number: 5 (lower is better)
Translates to: ELNHLMSKSLAFWNCIKMQPMHF*ANPGPD
Trigger: ATCCGGACCTGGATTGGCCAAAAAATGCATGGGCTG...CATCTTGATGCAGTTCCAAAATGCCAAGCTTTTACTCATCAGATGGTTCAATTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CAA 90 bp GAATTGAACCATCTGATGAGTAAAAGCTTGGCATTTTGGAACTGCATCAAGATGGGAGAGCTGAAGGACTaGGTGCCACCACAAAAACAG +
Preference number: 5 (lower is better)
Translates to: ELNHLMSKSLAFWNCIKMGELKD*VPPQKQ
Trigger: CTGTTTTTGTGGTGGCACCAAGTCCTTCAGCTCTCC...CATCTTGATGCAGTTCCAAAATGCCAAGCTTTTACTCATCAGATGGTTCAATTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CAA 90 bp CATTCGGCAACTGTGAGTGGCTCTGCACCCAAGTGGAACTTAGTAAGTTTCTCTGGTGGCTTGCAATATTaGATCCTGGTATTCAACATA +
Preference number: 5 (lower is better)
Translates to: HSATVSGSAPKWNLVSFSGGLQY*ILVFNI
Trigger: TATGTTGAATACCAGGATCAAATATTGCAAGCCACC...AGAGAAACTTACTAAGTTCCACTTGGGTGCAGAGCCACTCACAGTTGCCGAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CAA 90 bp ATGTCTGAACTAGCTCAGTGTCTTTATAGCACGTTCCTAGCCCAGAGTTTCCCAAGCTCTACAGTGCAATaGAGCAAAGTTACTTGTGCA +
Preference number: 5 (lower is better)
Translates to: MSELAQCLYSTFLAQSFPSSTVQ*SKVTCA
Trigger: TGCACAAGTAACTTTGCTCAATTGCACTGTAGAGCT...TGGGAAACTCTGGGCTAGGAACGTGCTATAAAGACACTGAGCTAGTTCAGACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CAA 90 bp ACAGATCCCTCTGAGACGGACATTTTGTGGCCTGTAAAACTCAAGAGACTAAACGTTTCAGCAGGTCCATaGGCTTCATCTGAGTTTGAA +
Preference number: 5 (lower is better)
Translates to: TDPSETDILWPVKLKRLNVSAGP*ASSEFE
Trigger: TTCAAACTCAGATGAAGCCAATGGACCTGCTGAAAC...GTTTAGTCTCTTGAGTTTTACAGGCCACAAAATGTCCGTCTCAGAGGGATCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CAA 90 bp CATTCGGCAACTGTGAGTGGCTCTGCACCCAAGTGGAACTTAGTAAGTTTCTCTAGTTACACACAGGCTTaGGTAATGAATGAACTGTCA +
Preference number: 5 (lower is better)
Translates to: HSATVSGSAPKWNLVSFSSYTQA*VMNELS
Trigger: TGACAGTTCATTCATTACCAAAGCCTGTGTGTAACT...AGAGAAACTTACTAAGTTCCACTTGGGTGCAGAGCCACTCACAGTTGCCGAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CAA 90 bp ACAGATCCCTCTGAGACGGACATTTTGTGGCCTGTAAAACTCAAGAGACTAAACATAACACGGACTAATTaGGACACTTTCCCCAAACCG +
Preference number: 5 (lower is better)
Translates to: TDPSETDILWPVKLKRLNITRTN*DTFPKP
Trigger: CGGTTTGGGGAAAGTGTCCAAATTAGTCCGTGTTAT...GTTTAGTCTCTTGAGTTTTACAGGCCACAAAATGTCCGTCTCAGAGGGATCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CAA 90 bp ACAGATCCCTCTGAGACGGACATTTTGTGGCCTGTAAAACTCAAGAGACTAAACACCTCTGTGAAGTTCTaGGGGGTTTCTACTTTAGTT +
Preference number: 5 (lower is better)
Translates to: TDPSETDILWPVKLKRLNTSVKF*GVSTLV
Trigger: AACTAAAGTAGAAACCCCCAAGAACTTCACAGAGGT...GTTTAGTCTCTTGAGTTTTACAGGCCACAAAATGTCCGTCTCAGAGGGATCTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CAA 90 bp CATTCGGCAACTGTGAGTGGCTCTGCACCCAAGTGGAACTTAGTAAGTTTCTCTAGAACAAACCAGGCCTaGTTTGTCTTCTTTACTATT +
Preference number: 5 (lower is better)
Translates to: HSATVSGSAPKWNLVSFSRTNQA*FVFFTI
Trigger: AATAGTAAAGAAGACAAACAAGGCCTGGTTTGTTCT...AGAGAAACTTACTAAGTTCCACTTGGGTGCAGAGCCACTCACAGTTGCCGAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CAA 90 bp TTAATGCCACTGATAAATACCTGTCCCAAGATCTCAATACATGAAGTAAAGAACAGCCTCACCAGCTCCTaGTGCAGTTCTGGTGAAGTC +
Preference number: 5 (lower is better)
Translates to: LMPLINTCPKISIHEVKNSLTSS*CSSGEV
Trigger: GACTTCACCAGAACTGCACAAGGAGCTGGTGAGGCT...GTTCTTTACTTCATGTATTGAGATCTTGGGACAGGTATTTATCAGTGGCATTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587884.1
CDS-3UTR CAA 90 bp AATGACAGATTCTGTCAGGACGGAGTCATTCTGCTCTGTCTGAATGAGGGAGAGGAATATCATAATGCTTaGGTAGAGAAGGGATATAGG +
Preference number: 5 (lower is better)
Translates to: NDRFCQDGVILLCLNEGEEYHNA*VEKGYR
Trigger: CCTATATCCCTTCTCTACCAAAGCATTATGATATTC...CTCTCCCTCATTCAGACAGAGCAGAATGACTCCGTCCTGACAGAATCTGTCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CAA 90 bp GTCCCGAATCCACTGCTACTGTCATGCTATGTAGACAGTTGTGTAGACACATCTGATTCTGCATCACTTTaGCTAGCCTGTGAATATCAT +
Preference number: 5 (lower is better)
Translates to: VPNPLLLSCYVDSCVDTSDSASL*LACEYH
Trigger: ATGATATTCACAGGCTAGCAAAAGTGATGCAGAATC...AGATGTGTCTACACAACTGTCTACATAGCATGACAGTAGCAGTGGATTCGGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CAA 90 bp AATACTCCATCCACAGATCTGGAGATAAAATATACACATGATGTGAAAGTAGGACTGCTCCGCGGAGCTTaGCATAAGCAGCCTGAGAAT +
Preference number: 5 (lower is better)
Translates to: NTPSTDLEIKYTHDVKVGLLRGA*HKQPEN
Trigger: ATTCTCAGGCTGCTTATGCAAAGCTCCGCGGAGCAG...TCCTACTTTCACATCATGTGTATATTTTATCTCCAGATCTGTGGATGGAGTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587884.1
CDS-3UTR CAA 90 bp TCACCTTCATTTGAAAGGAACGAGGACATGAACACTCTTGGCTTGTATGACATGGTTGGAATAGTCGCGTaGTTCATCATCATCAGGACT +
Preference number: 5 (lower is better)
Translates to: SPSFERNEDMNTLGLYDMVGIVA*FIIIRT
Trigger: AGTCCTGATGATGATGAACAACGCGACTATTCCAAC...CATGTCATACAAGCCAAGAGTGTTCATGTCCTCGTTCCTTTCAAATGAAGGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CAA 90 bp ATGTCTGAACTAGCTCAGTGTCTTTATAGCACGTTCCTAGCCCAGAGTTTCCCAAGGATGCCTTATAAATaGGGTGGCTTGCAATATTTG +
Preference number: 5 (lower is better)
Translates to: MSELAQCLYSTFLAQSFPRMPYK*GGLQYL
Trigger: CAAATATTGCAAGCCACCCAATTTATAAGGCATCCT...TGGGAAACTCTGGGCTAGGAACGTGCTATAAAGACACTGAGCTAGTTCAGACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CAA 90 bp ATGTCTGAACTAGCTCAGTGTCTTTATAGCACGTTCCTAGCCCAGAGTTTCCCAATTGACTTCTTTACTTaGGAGGAACACAAATGGGGT +
Preference number: 5 (lower is better)
Translates to: MSELAQCLYSTFLAQSFPIDFFT*EEHKWG
Trigger: ACCCCATTTGTGTTCCTCCAAAGTAAAGAAGTCAAT...TGGGAAACTCTGGGCTAGGAACGTGCTATAAAGACACTGAGCTAGTTCAGACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS-3UTR CAA 90 bp TCACCTTCATTTGAAAGGAACGAGGACATGAACACTCTTGGCTTGTATGACATGGTTAGACATCTTTATTaGGTCCCGATGCCACTGTTG +
Preference number: 5 (lower is better)
Translates to: SPSFERNEDMNTLGLYDMVRHLY*VPMPLL
Trigger: CAACAGTGGCATCGGGACCAAATAAAGATGTCTAAC...CATGTCATACAAGCCAAGAGTGTTCATGTCCTCGTTCCTTTCAAATGAAGGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS TCA 90 bp GGCCTGAGCCATCTGAGCAAAGGTAGTCAGAAGGCAAATCTCTTCTaGGCTATTCATAGAAGAAAGACACTTCTCAAAGTTGGTAAAATG +
Preference number: 5 (lower is better)
Translates to: GLSHLSKGSQKANLF*AIHRRKTLLKVGKM
Trigger: CATTTTACCAACTTTGAGAAGTGTCTTTCTTCTATGAATAGCTCAGAAGAGATTTGCCTTCTGACTACCTTTGCTCAGATGGCTCAGGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000587974.1
CDS TCA 90 bp AGGCAATGGCCAGGATGCCTTATAAATTGGGTGGCTTGCAATATTTaGTCCTGGTATTCAACATACTGCTTACTTGATGCCATGGATTCA +
Preference number: 5 (lower is better)
Translates to: RQWPGCLINWVACNI*SWYSTYCLLDAMDS
Trigger: TGAATCCATGGCATCAAGTAAGCAGTATGTTGAATACCAGGATCAAATATTGCAAGCCACCCAATTTATAAGGCATCCTGGCCATTGCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS GCA 90 bp GGTAACCCAAGGCATTCTTATGTTGTTGGTAGAGTAATTTCTGTATaGAGTCTTCCTGCATCAGCTGAAAAGCTGCTTTACACAAGTGGT +
Preference number: 5 (lower is better)
Translates to: GNPRHSYVVGRVISV*SLPASAEKLLYTSG
Trigger: ACCACTTGTGTAAAGCAGCTTTTCAGCTGATGCAGGAAGACTGCATACAGAAATTACTCTACCAACAACATAAGAATGCCTTGGGTTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000282041.11
ENST00000585906.5
ENST00000587884.1
ENST00000587974.1
ENST00000590884.5
ENST00000592272.5
CDS CCA 90 bp TCGTTTTTGTGCAGTTTTAGCCTCAAGATTAAATTCCAGGCCCATTaGTTAAATGAGGTCTCGGGTGTCTCTCCATATCGAACAATACTG +
Preference number: 5 (lower is better)
Translates to: SFLCSFSLKIKFQAH*LNEVSGVSPYRTIL
Trigger: CAGTATTGTTCGATATGGAGAGACACCCGAGACCTCATTTAACCAATGGGCCTGGAATTTAATCTTGAGGCTAAAACTGCACAAAAACGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000587974.1
CDS-3UTR CAA 90 bp GTCCCGAATCCACTGCTACTGTCATGCTATGTAGACAGTTGTGTAGACACATCTGAATATCATAATGCTTaGGTAGAGAAGGGATATAGG +
Preference number: 5 (lower is better)
Translates to: VPNPLLLSCYVDSCVDTSEYHNA*VEKGYR
Trigger: CCTATATCCCTTCTCTACCAAAGCATTATGATATTC...AGATGTGTCTACACAACTGTCTACATAGCATGACAGTAGCAGTGGATTCGGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CAA 90 bp AATTTCAGTAGATCTCCCGACCTGACCCAGTTTCCACAGACAAGTGTTTCAGCATGTTTAAGATCGAACTaGGTTAGCAGCATGAAAATC +
Preference number: 5 (lower is better)
Translates to: NFSRSPDLTQFPQTSVSACLRSN*VSSMKI
Trigger: GATTTTCATGCTGCTAACCAAGTTCGATCTTAAACA...TGCTGAAACACTTGTCTGTGGAAACTGGGTCAGGTCGGGAGATCTACTGAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CAA 90 bp GCAGCACTTTCATTTCATTCCTTAAAGTCTGTTCGCTGTTTAAACACTGAAGCAAGCACACTAACCCAGTaGACTTCACAGAGTACAGAC +
Preference number: 5 (lower is better)
Translates to: AALSFHSLKSVRCLNTEASTLTQ*TSQSTD
Trigger: GTCTGTACTCTGTGAAGTCAACTGGGTTAGTGTGCT...TGCTTCAGTGTTTAAACAGCGAACAGACTTTAAGGAATGAAATGAAAGTGCTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CAA 90 bp GTAGGAATAGAAAGGCCCGCAGACACTTTTAGGAGCTTCATGATTAATTCAGCACTGATGAGTAAAAGCTaGGCATTTTGGAACTGCATC +
Preference number: 5 (lower is better)
Translates to: VGIERPADTFRSFMINSALMSKS*AFWNCI
Trigger: GATGCAGTTCCAAAATGCCAAGCTTTTACTCATCAG...TGCTGAATTAATCATGAAGCTCCTAAAAGTGTCTGCGGGCCTTTCTATTCCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CAA 90 bp TCGGGCGGGTTAAAGACAATGATATCGTCTAAGAGCTTAGACATTTCCTGTTCTCTGATGAGTAAAAGCTaGGCATTTTGGAACTGCATC +
Preference number: 5 (lower is better)
Translates to: SGGLKTMISSKSLDISCSLMSKS*AFWNCI
Trigger: GATGCAGTTCCAAAATGCCAAGCTTTTACTCATCAG...AGAACAGGAAATGTCTAAGCTCTTAGACGATATCATTGTCTTTAACCCGCCCGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS TCA 90 bp TATCTTTCGTTGTCCTCTAAAACCAGGATCCATGGCTTAAAGAGCTaGATGATTACTGAATGTAGGGATTTCAGCACTGTTTTCCTGCTG +
Preference number: 5 (lower is better)
Translates to: YLSLSSKTRIHGLKS*MITECRDFSTVFLL
Trigger: CAGCAGGAAAACAGTGCTGAAATCCCTACATTCAGTAATCATTCAGCTCTTTAAGCCATGGATCCTGGTTTTAGAGGACAACGAAAGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592272.5
CDS-3UTR CAA 90 bp CTTTCATTTCATTCCTTAAAGTCTGTTCGCTGTTTAAACACTGAAGCAAGTAGAAAGGAAGGAGTGATGTaGCCTGCCACAATCCAGCTT +
Preference number: 5 (lower is better)
Translates to: LSFHSLKSVRCLNTEASRKEGVM*PATIQL
Trigger: AAGCTGGATTGTGGCAGGCAACATCACTCCTTCCTT...TCTACTTGCTTCAGTGTTTAAACAGCGAACAGACTTTAAGGAATGAAATGAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CAA 90 bp GAATTGAACCATCTGATGAGTAAAAGCTTGGCATTTTGGAACTGCATCAAGATGGGTGATTTTTCCATTTaGTTCCAGGGTGCTGAGGAA +
Preference number: 5 (lower is better)
Translates to: ELNHLMSKSLAFWNCIKMGDFSI*FQGAEE
Trigger: TTCCTCAGCACCCTGGAACAAAATGGAAAAATCACC...CATCTTGATGCAGTTCCAAAATGCCAAGCTTTTACTCATCAGATGGTTCAATTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CAA 90 bp GAATTGAACCATCTGATGAGTAAAAGCTTGGCATTTTGGAACTGCATCAAGATGGTTGGAATAGTCGCGTaGTTCATCATCATCAGGACT +
Preference number: 5 (lower is better)
Translates to: ELNHLMSKSLAFWNCIKMVGIVA*FIIIRT
Trigger: AGTCCTGATGATGATGAACAACGCGACTATTCCAAC...CATCTTGATGCAGTTCCAAAATGCCAAGCTTTTACTCATCAGATGGTTCAATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS GCA 90 bp TTCAATAACCAATCCCGAATCACCGCTATCTCAGATGCAGAAGGTTaGCAAAGATACAAAGGCAGTTCTTTAAACAAGTATAGAGAAACC +
Preference number: 5 (lower is better)
Translates to: FNNQSRITAISDAEG*QRYKGSSLNKYRET
Trigger: GGTTTCTCTATACTTGTTTAAAGAACTGCCTTTGTATCTTTGGCAACCTTCTGCATCTGAGATAGCGGTGATTCGGGATTGGTTATTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000587974.1
CDS-3UTR CAA 90 bp TCACCTTCATTTGAAAGGAACGAGGACATGAACACTCTTGGCTTGTATGACATGATTCATTTCTACTCTTaGGTAGCGATGATAGCTGAA +
Preference number: 5 (lower is better)
Translates to: SPSFERNEDMNTLGLYDMIHFYS*VAMIAE
Trigger: TTCAGCTATCATCGCTACCAAAGAGTAGAAATGAAT...CATGTCATACAAGCCAAGAGTGTTCATGTCCTCGTTCCTTTCAAATGAAGGTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS-3UTR CAA 90 bp CTAACCCAGTTGACTTCACAGAGTACAGACCCCAAAAATAAGAAACAGCTCTTGGAATATCATAATGCTTaGGTAGAGAAGGGATATAGG +
Preference number: 5 (lower is better)
Translates to: LTQLTSQSTDPKNKKQLLEYHNA*VEKGYR
Trigger: CCTATATCCCTTCTCTACCAAAGCATTATGATATTC...CAAGAGCTGTTTCTTATTTTTGGGGTCTGTACTCTGTGAAGTCAACTGGGTTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CAA 90 bp CTTTCATTTCATTCCTTAAAGTCTGTTCGCTGTTTAAACACTGAAGCAAGTAGAAATAAGAAACAGCTCTaGGGGCTTCCTCGTTCCACT +
Preference number: 5 (lower is better)
Translates to: LSFHSLKSVRCLNTEASRNKKQL*GLPRST
Trigger: AGTGGAACGAGGAAGCCCCAAGAGCTGTTTCTTATT...TCTACTTGCTTCAGTGTTTAAACAGCGAACAGACTTTAAGGAATGAAATGAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587884.1
ENST00000592272.5
CDS TCA 90 bp CCAGTGCATTTTCATTCATTTCTACTCTTTGGTAGCGATGATAGCTaGAAACTTTCACTTGATCTGCACAGATACCCTGTACAGACATTT +
Preference number: 5 (lower is better)
Translates to: PVHFHSFLLFGSDDS*KLSLDLHRYPVQTF
Trigger: AAATGTCTGTACAGGGTATCTGTGCAGATCAAGTGAAAGTTTTCAGCTATCATCGCTACCAAAGAGTAGAAATGAATGAAAATGCACTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000587974.1
CDS-3UTR CAA 90 bp GAGGAATTGAACCATCTGATGAGTAAAAGCTTGGCATTTTGGAACTGCATCAAGGAATATCATAATGCTTaGGTAGAGAAGGGATATAGG +
Preference number: 5 (lower is better)
Translates to: EELNHLMSKSLAFWNCIKEYHNA*VEKGYR
Trigger: CCTATATCCCTTCTCTACCAAAGCATTATGATATTC...CTTGATGCAGTTCCAAAATGCCAAGCTTTTACTCATCAGATGGTTCAATTCCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS-3UTR CAA 90 bp CTTTCATTTCATTCCTTAAAGTCTGTTCGCTGTTTAAACACTGAAGCAAGTAGACATACTGCTTTGGCATaGTGTCTAACAGCTCACCAT +
Preference number: 5 (lower is better)
Translates to: LSFHSLKSVRCLNTEASRHTALA*CLTAHH
Trigger: ATGGTGAGCTGTTAGACACAATGCCAAAGCAGTATG...TCTACTTGCTTCAGTGTTTAAACAGCGAACAGACTTTAAGGAATGAAATGAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587884.1
ENST00000590884.5
ENST00000592272.5
CDS CCA 72 bp GTTTTAGTCCGGCTGGCCTTGGCCTTGGCCCGGCGCTaGGGCTTCACCGCCTCGGCCATAGACCCTTCCGCG +
Preference number: 6 (lower is better)
Translates to: VLVRLALALARR*GFTASAIDPSA
Trigger: CGCGGAAGGGTCTATGGCCGAGGCGGTGAAGCCCCAGCGCCGGGCCAAGGCCAAGGCCAGCCGGACTAAAAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000587974.1
CDS GCA 72 bp CCGCGGCGCCGTCACCGTTTGTTTTTGTCAAACCCCTaGGCTTCAAGCAACCTGCCCGGTTCTGGCCTCCGG +
Preference number: 6 (lower is better)
Translates to: PRRRHRLFLSNP*ASSNLPGSGLR
Trigger: CCGGAGGCCAGAACCGGGCAGGTTGCTTGAAGCGCAGGGGTTTGACAAAAACAAACGGTGACGGCGCCGCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000282041.11
CDS GCA 72 bp GCCCTTCACTGCCCTCTGCTGGAACACGGAGGGCCTTaGTTGCAGCATGGTGGAAGTCAGCCACCTCGGTCA +
Preference number: 6 (lower is better)
Translates to: ALHCPLLEHGGP*LQHGGSQPPRS
Trigger: TGACCGAGGTGGCTGACTTCCACCATGCTGCAAGCAAGGCCCTCCGTGTTCCAGCAGAGGGCAGTGAAGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000282041.11
ENST00000585906.5
ENST00000587884.1
ENST00000587974.1
ENST00000590884.5
ENST00000592272.5
CDS GCA 72 bp TCCAACATTGTCTCCAGGGTGGACCTTTGGAGTGACTaGACTGTCCCCCACACAGGGTCTGGCCTCTCCCCC +
Preference number: 6 (lower is better)
Translates to: SNIVSRVDLWSD*TVPHTGSGLSP
Trigger: GGGGGAGAGGCCAGACCCTGTGTGGGGGACAGTGCAGTCACTCCAAAGGTCCACCCTGGAGACAATGTTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000587974.1
CDS CCA 72 bp GTGGGCCCAGCGATAAATCAGCAGCCTCTGGAGGGATaGCACGATGGGGAGCTTCAGCTGGGTCTGGGCTTT +
Preference number: 6 (lower is better)
Translates to: VGPAINQQPLEG*HDGELQLGLGF
Trigger: AAAGCCCAGACCCAGCTGAAGCTCCCCATCGTGCCATCCCTCCAGAGGCTGCTGATTTATCGCTGGGCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000282041.11
ENST00000585906.5
ENST00000587884.1
ENST00000587974.1
ENST00000590884.5
ENST00000592272.5
CDS GCA 72 bp TTCACTGCCCTCTGCTGGAACACGGAGGGCCTTGCTTaGAGCATGGTGGAAGTCAGCCACCTCGGTCAAACG +
Preference number: 6 (lower is better)
Translates to: FTALCWNTEGLA*SMVEVSHLGQT
Trigger: CGTTTGACCGAGGTGGCTGACTTCCACCATGCTGCAAGCAAGGCCCTCCGTGTTCCAGCAGAGGGCAGTGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000282041.11
ENST00000585906.5
ENST00000587884.1
ENST00000587974.1
ENST00000590884.5
ENST00000592272.5
CDS CCA 72 bp CCCTCTGCTGGAACACGGAGGGCCTTGCTTGCAGCATaGTGGAAGTCAGCCACCTCGGTCAAACGTCTCTTC +
Preference number: 6 (lower is better)
Translates to: PSAGTRRALLAA*WKSATSVKRLF
Trigger: GAAGAGACGTTTGACCGAGGTGGCTGACTTCCACCATGCTGCAAGCAAGGCCCTCCGTGTTCCAGCAGAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000282041.11
ENST00000585906.5
ENST00000587884.1
ENST00000587974.1
ENST00000590884.5
ENST00000592272.5
CDS GCA 72 bp CCAGTTGAGACGGGAGTTCTGGGTAGAGTCGCTCACTaGGAAGCAAGGGTTTCACTGCCACCAAAGCTGGTG +
Preference number: 6 (lower is better)
Translates to: PVETGVLGRVAH*EARVSLPPKLV
Trigger: CACCAGCTTTGGTGGCAGTGAAACCCTTGCTTCGCAGTGAGCGACTCTACCCAGAACTCCCGTCTCAACTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000587974.1
CDS GCA 72 bp TGTCATGACGCGCACAGGCTACGGCTGCCACCTCCCTaGCTTCTAGGGAAGATGTGCAGGCAAACTTCTAAC +
Preference number: 6 (lower is better)
Translates to: CHDAHRLRLPPP*LLGKMCRQTSN
Trigger: GTTAGAAGTTTGCCTGCACATCTTCCCTAGAAGGCAGGGAGGTGGCAGCCGTAGCCTGTGCGCGTCATGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587262.1
CDS CCA 72 bp TGGATCATGCTGTTGAGAAGCTTCACGTTGTCCCCATaGCTGGCTCCTGTCAGGTGCTGTGCCACCTTGTGG +
Preference number: 6 (lower is better)
Translates to: WIMLLRSFTLSP*LAPVRCCATLW
Trigger: CCACAAGGTGGCACAGCACCTGACAGGAGCCAGCCATGGGGACAACGTGAAGCTTCTCAACAGCATGATCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282041.11
ENST00000585906.5
ENST00000586655.1
ENST00000587974.1
CDS CCA 72 bp AGCGATAAATCAGCAGCCTCTGGAGGGATGGCACGATaGGGAGCTTCAGCTGGGTCTGGGCTTTCTTCAGAG +
Preference number: 6 (lower is better)
Translates to: SDKSAASGGMAR*GASAGSGLSSE
Trigger: CTCTGAAGAAAGCCCAGACCCAGCTGAAGCTCCCCATCGTGCCATCCCTCCAGAGGCTGCTGATTTATCGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000282041.11
ENST00000585906.5
ENST00000587884.1
ENST00000587974.1
ENST00000590884.5
ENST00000592272.5
CDS CAA 72 bp ATGTGTGCCTGGATCATGCTGTTGAGAAGCTTCACGTaGTCCCCATGGCTGGCTCCTGTCAGGTGCTGTGCC +
Preference number: 6 (lower is better)
Translates to: MCAWIMLLRSFT*SPWLAPVRCCA
Trigger: GGCACAGCACCTGACAGGAGCCAGCCATGGGGACAACGTGAAGCTTCTCAACAGCATGATCCAGGCACACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282041.11
ENST00000585906.5
ENST00000586655.1
ENST00000587974.1
CDS TCA 72 bp GAGTGGGCGTGGCCAAGCCCTCCACAAAGGAAGGAGTaGTGTTGCCTGCCACAATCCAGCTTACCAAAGATG +
Preference number: 6 (lower is better)
Translates to: EWAWPSPPQRKE*CCLPQSSLPKM
Trigger: CATCTTTGGTAAGCTGGATTGTGGCAGGCAACATCACTCCTTCCTTTGTGGAGGGCTTGGCCACGCCCACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000282041.11
ENST00000585906.5
ENST00000587884.1
ENST00000587974.1
ENST00000590884.5
ENST00000592272.5
CDS CCA 72 bp CTCACTGCGAAGCAAGGGTTTCACTGCCACCAAAGCTaGTGCTTCTCCAGCAATTTCAGCTGGCAACTGGGG +
Preference number: 6 (lower is better)
Translates to: LTAKQGFHCHQS*CFSSNFSWQLG
Trigger: CCCCAGTTGCCAGCTGAAATTGCTGGAGAAGCACCAGCTTTGGTGGCAGTGAAACCCTTGCTTCGCAGTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000587974.1
CDS CCA 72 bp TCTGCTGGAACACGGAGGGCCTTGCTTGCAGCATGGTaGAAGTCAGCCACCTCGGTCAAACGTCTCTTCATT +
Preference number: 6 (lower is better)
Translates to: SAGTRRALLAAW*KSATSVKRLFI
Trigger: AATGAAGAGACGTTTGACCGAGGTGGCTGACTTCCACCATGCTGCAAGCAAGGCCCTCCGTGTTCCAGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000282041.11
ENST00000585906.5
ENST00000587884.1
ENST00000587974.1
ENST00000590884.5
ENST00000592272.5
CDS CAA 72 bp GGCGTGGCCAAGCCCTCCACAAAGGAAGGAGTGATGTaGCCTGCCACAATCCAGCTTACCAAAGATGAGAGC +
Preference number: 6 (lower is better)
Translates to: GVAKPSTKEGVM*PATIQLTKDES
Trigger: GCTCTCATCTTTGGTAAGCTGGATTGTGGCAGGCAACATCACTCCTTCCTTTGTGGAGGGCTTGGCCACGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000282041.11
ENST00000585906.5
ENST00000587884.1
ENST00000587974.1
ENST00000590884.5
ENST00000592272.5
CDS CAA 90 bp CTTACAGATATGTGTGCCTGGATCATGCTGTTGAGAAGCTTCACGTaGTCCCCATGGCTGGCTCCTGTCAGGTGCTGTGCCACCTTGTGG +
Preference number: 6 (lower is better)
Translates to: LTDMCAWIMLLRSFT*SPWLAPVRCCATLW
Trigger: CCACAAGGTGGCACAGCACCTGACAGGAGCCAGCCATGGGGACAACGTGAAGCTTCTCAACAGCATGATCCAGGCACACATATCTGTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000282041.11
ENST00000585906.5
ENST00000586655.1
ENST00000587974.1
CDS TCA 72 bp CGCTTTCACAGCCTTCAAGAGAGGATGAAACGTGGGTaGCTCTGTCATGTCAGGCACAGTGACGGAGAAGGG +
Preference number: 6 (lower is better)
Translates to: RFHSLQERMKRG*LCHVRHSDGEG
Trigger: CCCTTCTCCGTCACTGTGCCTGACATGACAGAGTCACCCACGTTTCATCCTCTCTTGAAGGCTGTGAAAGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000587974.1
CDS TCA 72 bp ATGGGCATGCCCGCTTTCACAGCCTTCAAGAGAGGATaGAACGTGGGTGACTCTGTCATGTCAGGCACAGTG +
Preference number: 6 (lower is better)
Translates to: MGMPAFTAFKRG*NVGDSVMSGTV
Trigger: CACTGTGCCTGACATGACAGAGTCACCCACGTTTCATCCTCTCTTGAAGGCTGTGAAAGCGGGCATGCCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000587974.1
CDS GCA 72 bp TGGGTAGAGTCGCTCACTGCGAAGCAAGGGTTTCACTaGCACCAAAGCTGGTGCTTCTCCAGCAATTTCAGC +
Preference number: 6 (lower is better)
Translates to: WVESLTAKQGFH*HQSWCFSSNFS
Trigger: GCTGAAATTGCTGGAGAAGCACCAGCTTTGGTGGCAGTGAAACCCTTGCTTCGCAGTGAGCGACTCTACCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000587974.1
CDS GCA 72 bp GGGACACCGCTGTCCAAGTGTAGGAACAAGAGGAGATaGGATAAAAACCTGCCAAGCACACAGGAGGACGCA +
Preference number: 6 (lower is better)
Translates to: GTPLSKCRNKRR*DKNLPSTQEDA
Trigger: TGCGTCCTCCTGTGTGCTTGGCAGGTTTTTATCGCATCTCCTCTTGTTCCTACACTTGGACAGCGGTGTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586655.1
CDS CCA 72 bp CCTGAGGAGGATGGCTTCCGCTCGCTGGGCTTCATGTaGCACATAAACTCAGCTCGATTTTTGACAGGAGAC +
Preference number: 6 (lower is better)
Translates to: PEEDGFRSLGFM*HINSARFLTGD
Trigger: GTCTCCTGTCAAAAATCGAGCTGAGTTTATGTGCCACATGAAGCCCAGCGAGCGGAAGCCATCCTCCTCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000587974.1
CDS CAA 90 bp CTCGCTCTCCACCTGGTGCATGAGGTAGAAGAGCTTCCACAGCATTaGCACAGACAGAGTCCCAAAGGGCATCTCGGACATAAACAGCCA +
Preference number: 6 (lower is better)
Translates to: LALHLVHEVEELPQH*HRQSPKGHLGHKQP
Trigger: TGGCTGTTTATGTCCGAGATGCCCTTTGGGACTCTGTCTGTGCAAATGCTGTGGAAGCTCTTCTACCTCATGCACCAGGTGGAGAGCGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000587974.1
CDS TCA 72 bp GATGAAACGTGGGTGACTCTGTCATGTCAGGCACAGTaGCGGAGAAGGGAACAGCTGGACAATTCGGCTGTA +
Preference number: 6 (lower is better)
Translates to: DETWVTLSCQAQ*RRREQLDNSAV
Trigger: TACAGCCGAATTGTCCAGCTGTTCCCTTCTCCGTCACTGTGCCTGACATGACAGAGTCACCCACGTTTCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000587974.1
CDS TCA 72 bp AACTCCAACACAGCAACGGGGCCCACTTCATTGGGCTaGGTGCTTACAGATATGTGTGCCTGGATCATGCTG +
Preference number: 6 (lower is better)
Translates to: NSNTATGPTSLG*VLTDMCAWIML
Trigger: CAGCATGATCCAGGCACACATATCTGTAAGCACTCAGCCCAATGAAGTGGGCCCCGTTGCTGTGTTGGAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000282041.11
ENST00000585906.5
ENST00000586655.1
ENST00000587884.1
ENST00000587974.1
ENST00000590884.5
ENST00000592272.5
CDS CCA 72 bp AATGAAGGGCCAGGGTCTGGTGGAGGTGCTCAGATTTaGCATCGAATAGCTTCTTTAGCTCCACCAGTGCAT +
Preference number: 6 (lower is better)
Translates to: NEGPGSGGGAQI*HRIASLAPPVH
Trigger: ATGCACTGGTGGAGCTAAAGAAGCTATTCGATGCCAAATCTGAGCACCTCCACCAGACCCTGGCCCTTCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000587974.1
CDS CAA 90 bp TCTACCTCTGTGAAGTTCTTGGGGGTTTCTACTTTAGTTCCAACATaGTCTCCAGGGTGGACCTTTGGAGTGACTGCACTGTCCCCCACA +
Preference number: 6 (lower is better)
Translates to: STSVKFLGVSTLVPT*SPGWTFGVTALSPT
Trigger: TGTGGGGGACAGTGCAGTCACTCCAAAGGTCCACCCTGGAGACAATGTTGGAACTAAAGTAGAAACCCCCAAGAACTTCACAGAGGTAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000587974.1
CDS TCA 72 bp GCGGGGCATCGAAGAATATGGTTTAGAAGGAAGAGGTaGTCTCCAGGACAGCCAACTCTTTGTAGCACGGAT +
Preference number: 6 (lower is better)
Translates to: AGHRRIWFRRKR*SPGQPTLCSTD
Trigger: ATCCGTGCTACAAAGAGTTGGCTGTCCTGGAGATCACCTCTTCCTTCTAAACCATATTCTTCGATGCCCCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000587974.1
CDS GCA 72 bp AATATCCTCATCTGGTTCAAGGCCCCAGGCAGTAAGTaGCAAGTGAATGGACTCCAGAAGCCTTGGTTAGCA +
Preference number: 6 (lower is better)
Translates to: NILIWFKAPGSK*QVNGLQKPWLA
Trigger: TGCTAACCAAGGCTTCTGGAGTCCATTCACTTGGCACTTACTGCCTGGGGCCTTGAACCAGATGAGGATATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590884.5
CDS GCA 72 bp CCAAGTGTAGGAACAAGAGGAGATGCGATAAAAACCTaGCAAGCACACAGGAGGACGCACTTTACCTTCCGA +
Preference number: 6 (lower is better)
Translates to: PSVGTRGDAIKT*QAHRRTHFTFR
Trigger: TCGGAAGGTAAAGTGCGTCCTCCTGTGTGCTTGGCAGGTTTTTATCGCATCTCCTCTTGTTCCTACACTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586655.1
CDS CCA 72 bp TGCCACCAAAGCTGGTGCTTCTCCAGCAATTTCAGCTaGCAACTGGGGATACAGTTTCTTCACTCTAGGTGT +
Preference number: 6 (lower is better)
Translates to: CHQSWCFSSNFS*QLGIQFLHSRC
Trigger: ACACCTAGAGTGAAGAAACTGTATCCCCAGTTGCCAGCTGAAATTGCTGGAGAAGCACCAGCTTTGGTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000587974.1
CDS TCA 72 bp ATGCTTTCTGTCTGCTTAGACGCTCGGCCTTGCTGGTaGATTGCTGAAGATCTCAGAACAGCTGAACTACTG +
Preference number: 6 (lower is better)
Translates to: MLSVCLDARPCW*IAEDLRTAELL
Trigger: CAGTAGTTCAGCTGTTCTGAGATCTTCAGCAATTCACCAGCAAGGCCGAGCGTCTAAGCAGACAGAAAGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000587974.1
CDS TCA 72 bp CCATCTATGGGTAACCCATACTGTGGTCCCGGACGGTaGAGATACAGAAGGAAGAACTTCTGCCAAATGAGT +
Preference number: 6 (lower is better)
Translates to: PSMGNPYCGPGR*RYRRKNFCQMS
Trigger: ACTCATTTGGCAGAAGTTCTTCCTTCTGTATCTTCACCGTCCGGGACCACAGTATGGGTTACCCATAGATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000282041.11
ENST00000585906.5
ENST00000587884.1
ENST00000587974.1
ENST00000590884.5
ENST00000592272.5
CDS GCA 72 bp AATGTCTTGACTGGACCAGAATTCCCAATAGTGGGATaGCTTCTGCACAGAACTTCTCAATGCTGTGGCCCA +
Preference number: 6 (lower is better)
Translates to: NVLTGPEFPIVG*LLHRTSQCCGP
Trigger: TGGGCCACAGCATTGAGAAGTTCTGTGCAGAAGGCATCCCACTATTGGGAATTCTGGTCCAGTCAAGACATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000587974.1
CDS GCA 72 bp TTCACAATAATGCATCAGGTGCAACCAAAGGGCTCCTaGATCACCTGGCAACAGCTTATCTTTCGTTGTCCT +
Preference number: 6 (lower is better)
Translates to: FTIMHQVQPKGS*ITWQQLIFRCP
Trigger: AGGACAACGAAAGATAAGCTGTTGCCAGGTGATGCAGGAGCCCTTTGGTTGCACCTGATGCATTATTGTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592272.5
CDS CCA 72 bp TGTCATGTCAGGCACAGTGACGGAGAAGGGAACAGCTaGACAATTCGGCTGTATTCCATAATCGTTTTTGTG +
Preference number: 6 (lower is better)
Translates to: CHVRHSDGEGNS*TIRLYSIIVFV
Trigger: CACAAAAACGATTATGGAATACAGCCGAATTGTCCAGCTGTTCCCTTCTCCGTCACTGTGCCTGACATGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000587974.1
CDS CAA 90 bp AAGGCAGAATCTTATCCAGGACATGAACCACTGTTCTCAAATGTCTaGACTGGACCAGAATTCCCAATAGTGGGATGCCTTCTGCACAGA +
Preference number: 6 (lower is better)
Translates to: KAESYPGHEPLFSNV*TGPEFPIVGCLLHR
Trigger: TCTGTGCAGAAGGCATCCCACTATTGGGAATTCTGGTCCAGTCAAGACATTTGAGAACAGTGGTTCATGTCCTGGATAAGATTCTGCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000587974.1
CDS CAA 90 bp TGGATACAGACAGTTAACGAGAAGAGCCAAGAAGCTTTTCCCATCTaGAAGGCAATGGCCAGGATGCCTTATAAATTGGGTGGCTTGCAA +
Preference number: 6 (lower is better)
Translates to: WIQTVNEKSQEAFPI*KAMARMPYKLGGLQ
Trigger: TTGCAAGCCACCCAATTTATAAGGCATCCTGGCCATTGCCTTCAAGATGGGAAAAGCTTCTTGGCTCTTCTCGTTAACTGTCTGTATCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS TCA 72 bp ACAGGAGACATCAGCAGGGCAAGGGATTGCATAAAATaGAAGACCCCTGATGGGTTATGCAACACTTTGATC +
Preference number: 6 (lower is better)
Translates to: TGDISRARDCIK*KTPDGLCNTLI
Trigger: GATCAAAGTGTTGCATAACCCATCAGGGGTCTTTCATTTTATGCAATCCCTTGCCCTGCTGATGTCTCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000587974.1
CDS TCA 72 bp CAGTTAACGAGAAGAGCCAAGAAGCTTTTCCCATCTTaGAGGCAATGGCCAGGATGCCTTATAAATTGGGTG +
Preference number: 6 (lower is better)
Translates to: QLTRRAKKLFPS*RQWPGCLINWV
Trigger: CACCCAATTTATAAGGCATCCTGGCCATTGCCTTCAAGATGGGAAAAGCTTCTTGGCTCTTCTCGTTAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS TCA 72 bp CAAACTTCTAACCCTTCATTGTATATACTGACCTGCTaGGCTTTGGGGGTCAGATGTAATTCAGAGCCAGGC +
Preference number: 6 (lower is better)
Translates to: QTSNPSLYILTC*ALGVRCNSEPG
Trigger: GCCTGGCTCTGAATTACATCTGACCCCCAAAGCTCAGCAGGTCAGTATATACAATGAAGGGTTAGAAGTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587262.1
CDS GCA 72 bp TTTCTGTATGCAGTCTTCCTGCATCAGCTGAAAAGCTaGTTTACACAAGTGGTCCATGAGGAAGAGGATAGG +
Preference number: 6 (lower is better)
Translates to: FLYAVFLHQLKS*FTQVVHEEEDR
Trigger: CCTATCCTCTTCCTCATGGACCACTTGTGTAAAGCAGCTTTTCAGCTGATGCAGGAAGACTGCATACAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000282041.11
ENST00000585906.5
ENST00000587884.1
ENST00000587974.1
ENST00000590884.5
ENST00000592272.5
CDS CCA 72 bp TTTATCACCAATTCCCCTTCAATAACTCTCCGGAGCTaGGAGTCCTCTTCAAAGATGGATTCCATGTTGAGC +
Preference number: 6 (lower is better)
Translates to: FITNSPSITLRS*ESSSKMDSMLS
Trigger: GCTCAACATGGAATCCATCTTTGAAGAGGACTCCCAGCTCCGGAGAGTTATTGAAGGGGAATTGGTGATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000282041.11
ENST00000585906.5
ENST00000587884.1
ENST00000587974.1
ENST00000590884.5
ENST00000592272.5
CDS TCA 72 bp GAGCAATGCATAGATGTAAGACTCCACTTGCAATCTTaGGAGCACAGAAGTATAAGAATGAAGGGCCAGGGT +
Preference number: 6 (lower is better)
Translates to: EQCIDVRLHLQS*EHRSIRMKGQG
Trigger: ACCCTGGCCCTTCATTCTTATACTTCTGTGCTCTCAAGATTGCAAGTGGAGTCTTACATCTATGCATTGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000587974.1
CDS TCA 72 bp TGTGCAGGCAAACTTCTAACCCTTCATTGTATATACTaGCCTGCTGAGCTTTGGGGGTCAGATGTAATTCAG +
Preference number: 6 (lower is better)
Translates to: CAGKLLTLHCIY*PAELWGSDVIQ
Trigger: CTGAATTACATCTGACCCCCAAAGCTCAGCAGGTCAGTATATACAATGAAGGGTTAGAAGTTTGCCTGCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587262.1
CDS CCA 72 bp TGCAGTTTTAGCCTCAAGATTAAATTCCAGGCCCATTaGTTAAATGAGGTCTCGGGTGTCTCTCCATATCGA +
Preference number: 6 (lower is better)
Translates to: CSFSLKIKFQAH*LNEVSGVSPYR
Trigger: TCGATATGGAGAGACACCCGAGACCTCATTTAACCAATGGGCCTGGAATTTAATCTTGAGGCTAAAACTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000587974.1
CDS CAA 72 bp TCTTATCCAGGACATGAACCACTGTTCTCAAATGTCTaGACTGGACCAGAATTCCCAATAGTGGGATGCCTT +
Preference number: 6 (lower is better)
Translates to: SYPGHEPLFSNV*TGPEFPIVGCL
Trigger: AAGGCATCCCACTATTGGGAATTCTGGTCCAGTCAAGACATTTGAGAACAGTGGTTCATGTCCTGGATAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000587974.1
CDS CAA 72 bp CCCATCTTGAAGGCAATGGCCAGGATGCCTTATAAATaGGGTGGCTTGCAATATTTGATCCTGGTATTCAAC +
Preference number: 6 (lower is better)
Translates to: PILKAMARMPYK*GGLQYLILVFN
Trigger: GTTGAATACCAGGATCAAATATTGCAAGCCACCCAATTTATAAGGCATCCTGGCCATTGCCTTCAAGATGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS CAA 72 bp ACAGTTAACGAGAAGAGCCAAGAAGCTTTTCCCATCTaGAAGGCAATGGCCAGGATGCCTTATAAATTGGGT +
Preference number: 6 (lower is better)
Translates to: TVNEKSQEAFPI*KAMARMPYKLG
Trigger: ACCCAATTTATAAGGCATCCTGGCCATTGCCTTCAAGATGGGAAAAGCTTCTTGGCTCTTCTCGTTAACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS CAA 90 bp TGGACTCCAGAAGCCTTGGTTAGCAGCATGAAAATCATATCACTGTaGTCCTCACTTAGAAACTTCACCACTTGCTCATACAGCTGTATG +
Preference number: 6 (lower is better)
Translates to: WTPEALVSSMKIISL*SSLRNFTTCSYSCM
Trigger: CATACAGCTGTATGAGCAAGTGGTGAAGTTTCTAAGTGAGGACAACAGTGATATGATTTTCATGCTGCTAACCAAGGCTTCTGGAGTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590884.5
CDS TCA 72 bp GGTGAATTGCTGAAGATCTCAGAACAGCTGAACTACTaGGCAATGCATAGATGTAAGACTCCACTTGCAATC +
Preference number: 6 (lower is better)
Translates to: GELLKISEQLNY*AMHRCKTPLAI
Trigger: GATTGCAAGTGGAGTCTTACATCTATGCATTGCTCAGTAGTTCAGCTGTTCTGAGATCTTCAGCAATTCACC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000587974.1
CDS TCA 72 bp TATAGAGAAACCATTCCAACCTGGTCAATGGTCTCTTaGACTCTATCCAGAAGGACGGAAATTATCTCAGGG +
Preference number: 6 (lower is better)
Translates to: YRETIPTWSMVS*TLSRRTEIISG
Trigger: CCCTGAGATAATTTCCGTCCTTCTGGATAGAGTTCAAGAGACCATTGACCAGGTTGGAATGGTTTCTCTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000587974.1
CDS CCA 72 bp AACCTGCTTCATACTTTCAGAGAGAATCCCAGCATATaGCTTCTGTGCAAGGTACTTCTGATAAGCTTCAAG +
Preference number: 6 (lower is better)
Translates to: NLLHTFRENPSI*LLCKVLLISFK
Trigger: CTTGAAGCTTATCAGAAGTACCTTGCACAGAAGCCATATGCTGGGATTCTCTCTGAAAGTATGAAGCAGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000587974.1
CDS CCA 72 bp ATGAGGTCTCGGGTGTCTCTCCATATCGAACAATACTaGCCAAATATGAAACCTGCTTCATACTTTCAGAGA +
Preference number: 6 (lower is better)
Translates to: MRSRVSLHIEQY*PNMKPASYFQR
Trigger: TCTCTGAAAGTATGAAGCAGGTTTCATATTTGGCCAGTATTGTTCGATATGGAGAGACACCCGAGACCTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000587974.1
CDS CAA 90 bp GAAGCTTTTCCCATCTTGAAGGCAATGGCCAGGATGCCTTATAAATaGGGTGGCTTGCAATATTTGATCCTGGTATTCAACATACTGCTT +
Preference number: 6 (lower is better)
Translates to: EAFPILKAMARMPYK*GGLQYLILVFNILL
Trigger: AAGCAGTATGTTGAATACCAGGATCAAATATTGCAAGCCACCCAATTTATAAGGCATCCTGGCCATTGCCTTCAAGATGGGAAAAGCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS TCA 72 bp CCAGGATGCCTTATAAATTGGGTGGCTTGCAATATTTaGTCCTGGTATTCAACATACTGCTTACTTGATGCC +
Preference number: 6 (lower is better)
Translates to: PGCLINWVACNI*SWYSTYCLLDA
Trigger: GGCATCAAGTAAGCAGTATGTTGAATACCAGGATCAAATATTGCAAGCCACCCAATTTATAAGGCATCCTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS CAA 72 bp GCAATATTTGATCCTGGTATTCAACATACTGCTTACTaGATGCCATGGATTCAAGAGCATTCAGAGCCTGCT +
Preference number: 6 (lower is better)
Translates to: AIFDPGIQHTAY*MPWIQEHSEPA
Trigger: AGCAGGCTCTGAATGCTCTTGAATCCATGGCATCAAGTAAGCAGTATGTTGAATACCAGGATCAAATATTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS CAA 72 bp AAGGCAATGGCCAGGATGCCTTATAAATTGGGTGGCTaGCAATATTTGATCCTGGTATTCAACATACTGCTT +
Preference number: 6 (lower is better)
Translates to: KAMARMPYKLGG*QYLILVFNILL
Trigger: AAGCAGTATGTTGAATACCAGGATCAAATATTGCAAGCCACCCAATTTATAAGGCATCCTGGCCATTGCCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000590854.5
CDS CAA 72 bp GAAGCCTTGGTTAGCAGCATGAAAATCATATCACTGTaGTCCTCACTTAGAAACTTCACCACTTGCTCATAC +
Preference number: 6 (lower is better)
Translates to: EALVSSMKIISL*SSLRNFTTCSY
Trigger: GTATGAGCAAGTGGTGAAGTTTCTAAGTGAGGACAACAGTGATATGATTTTCATGCTGCTAACCAAGGCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590884.5
CDS CAA 72 bp TACTCTTTGGTAGCGATGATAGCTGAAAACTTTCACTaGATCTGCACAGATACCCTGTACAGACATTTGTTC +
Preference number: 6 (lower is better)
Translates to: YSLVAMIAENFH*ICTDTLYRHLF
Trigger: GAACAAATGTCTGTACAGGGTATCTGTGCAGATCAAGTGAAAGTTTTCAGCTATCATCGCTACCAAAGAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000587974.1
CDS CAA 72 bp GCATCACTTTTGCTAGCCTGTGAATATCATAATGCTTaGGTAGAGAAGGGATATAGGTATCTCCTTTTTGAA +
Preference number: 6 (lower is better)
Translates to: ASLLLACEYHNA*VEKGYRYLLFE
Trigger: TTCAAAAAGGAGATACCTATATCCCTTCTCTACCAAAGCATTATGATATTCACAGGCTAGCAAAAGTGATGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000282041.11
ENST00000585906.5
ENST00000587884.1
ENST00000587974.1
ENST00000590884.5
ENST00000592272.5
CDS TCA 72 bp TTTTGTAGGATACTATTTCACTTATGTTTCAACTCCTaGAATCCTCATCAAAAACACATCCCATGTCTTCCA +
Preference number: 6 (lower is better)
Translates to: FCRILFHLCFNS*NPHQKHIPCLP
Trigger: TGGAAGACATGGGATGTGTTTTTGATGAGGATTTCAGGAGTTGAAACATAAGTGAAATAGTATCCTACAAAA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587973.1
CDS GCA 72 bp GCAACTCATAAAATTCATGCCTGTCTTGATGAGCCATaGTGTCAAATTCTTCTAAATATGACTCAACATTTT +
Preference number: 6 (lower is better)
Translates to: ATHKIHACLDEP*CQILLNMTQHF
Trigger: AAAATGTTGAGTCATATTTAGAAGAATTTGACAGCATGGCTCATCAAGACAGGCATGAATTTTATGAGTTGC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000282041.11
ENST00000587974.1