Pregenerated sensors for EPCAM-DT (Homo sapiens)
Ensembl gene IDs: ENSG00000234690Ensembl transcript IDs: ENST00000413185.2, ENST00000419035.1, ENST00000441997.5, ENST00000448713.5, ENST00000450550.5, ENST00000658129.1
Found 61 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GCTCTGCATTCGCCCCAGGACCAGCCGCAGCTCCACGGTGGGCGGTaGTGGCAAGGCTTGCTTGAGAAATGGAGGAGAAGCCAGTCTCTC | + |
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Preference number: 5 (lower is better) Translates to: ALHSPQDQPQLHGGR*WQGLLEKWRRSQSL Trigger: GAGAGACTGGCTTCTCCTCCATTTCTCAAGCAAGCCTTGCCAGCACCGCCCACCGTGGAGCTGCGGCTGGTCCTGGGGCGAATGCAGAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000448713.5 |
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| CDS TCA 90 bp | CTGATCGAGCTGGCTGGCCAGATCCCAAAGGTGGAGATGACAGGGTaGGTGCAGACCCTCACAGGCACAGGGAGGGTGAGGAGTAGGAGG | + |
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Preference number: 5 (lower is better) Translates to: LIELAGQIPKVEMTG*VQTLTGTGRVRSRR Trigger: CCTCCTACTCCTCACCCTCCCTGTGCCTGTGAGGGTCTGCACTCACCCTGTCATCTCCACCTTTGGGATCTGGCCAGCCAGCTCGATCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441997.5 |
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| CDS TCA 90 bp | AAGCAAGACCAGGGTGAGTGCAGACCCTCACAGGCACAGGGAGGGTaGGGAGTAGGAGGTGGGCTGCCCGTGACTGCATATCCATGCACA | + |
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Preference number: 5 (lower is better) Translates to: KQDQGECRPSQAQGG*GVGGGLPVTAYPCT Trigger: TGTGCATGGATATGCAGTCACGGGCAGCCCACCTCCTACTCCTCACCCTCCCTGTGCCTGTGAGGGTCTGCACTCACCCTGGTCTTGCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000413185.2 |
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| CDS TCA 90 bp | GAATCTTGGGAGGGTGAGTGCAGACCCTCACAGGCACAGGGAGGGTaGGGAGTAGGAGGTGGGCTGCCCGTGACTGCATATCCATGCACA | + |
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Preference number: 5 (lower is better) Translates to: ESWEGECRPSQAQGG*GVGGGLPVTAYPCT Trigger: TGTGCATGGATATGCAGTCACGGGCAGCCCACCTCCTACTCCTCACCCTCCCTGTGCCTGTGAGGGTCTGCACTCACCCTCCCAAGATTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000450550.5 |
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| CDS GCA 90 bp | ACAGGCACAGGGAGGGTGAGGAGTAGGAGGTGGGCTGCCCGTGACTaGATATCCATGCACAGTTCACCAGCTCCAGGAGTCTTCCTCTGG | + |
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Preference number: 5 (lower is better) Translates to: TGTGRVRSRRWAARD*ISMHSSPAPGVFLW Trigger: CCAGAGGAAGACTCCTGGAGCTGGTGAACTGTGCATGGATATGCAGTCACGGGCAGCCCACCTCCTACTCCTCACCCTCCCTGTGCCTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000413185.2 ENST00000441997.5 ENST00000450550.5 |
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| CDS GCA 90 bp | CCCAGGACCAGCCGCAGCTCCACGGTGGGCGGTGCTGGCAAGGCTTaGTTGAGAAATGGAGGAGAAGCCAGTCTCTCTCTCTCACTCTTT | + |
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Preference number: 5 (lower is better) Translates to: PRTSRSSTVGGAGKA*LRNGGEASLSLSLF Trigger: AAAGAGTGAGAGAGAGAGACTGGCTTCTCCTCCATTTCTCAAGCAAGCCTTGCCAGCACCGCCCACCGTGGAGCTGCGGCTGGTCCTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000448713.5 |
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| CDS TCA 90 bp | ACCACCCTTCATCCCCCATGGCTCACACTGGATCTGGGTGCCACCTaGGAGGACCAGTGCCTTCTGAGCTTCCTTCTGGTCTGGGTAATC | + |
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Preference number: 5 (lower is better) Translates to: TTLHPPWLTLDLGAT*EDQCLLSFLLVWVI Trigger: GATTACCCAGACCAGAAGGAAGCTCAGAAGGCACTGGTCCTCTCAGGTGGCACCCAGATCCAGTGTGAGCCATGGGGGATGAAGGGTGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000419035.1 ENST00000658129.1 |
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| CDS GCA 90 bp | TACTTCCATGTCAGAGTTGCCAGGTCTTTGAGAGCAGGAGCTGTATaGTGCTCAGCTCTGCATTCGCCCCAGGACCAGCCGCAGCTCCAC | + |
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Preference number: 5 (lower is better) Translates to: YFHVRVARSLRAGAV*CSALHSPQDQPQLH Trigger: GTGGAGCTGCGGCTGGTCCTGGGGCGAATGCAGAGCTGAGCAGCATACAGCTCCTGCTCTCAAAGACCTGGCAACTCTGACATGGAAGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000448713.5 |
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| CDS TCA 90 bp | CTCTCTTGGGCAAGCCTTACTTCCATGTCAGAGTTGCCAGGTCTTTaGGAGCAGGAGCTGTATGCTGCTCAGCTCTGCATTCGCCCCAGG | + |
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Preference number: 5 (lower is better) Translates to: LSWASLTSMSELPGL*EQELYAAQLCIRPR Trigger: CCTGGGGCGAATGCAGAGCTGAGCAGCATACAGCTCCTGCTCTCAAAGACCTGGCAACTCTGACATGGAAGTAAGGCTTGCCCAAGAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000448713.5 |
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| CDS GCA 90 bp | GCACATCCTCAGTTCCTATCCCAGAATAGCAACAGGCAGCAGCAATaGTATCAGCAACTGGCCACTCATGGCAAGGGCTGCAAAACCTCA | + |
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Preference number: 5 (lower is better) Translates to: AHPQFLSQNSNRQQQ*YQQLATHGKGCKTS Trigger: TGAGGTTTTGCAGCCCTTGCCATGAGTGGCCAGTTGCTGATAGCATTGCTGCTGCCTGTTGCTATTCTGGGATAGGAACTGAGGATGTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000419035.1 ENST00000658129.1 |
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| CDS TCA 90 bp | AGTTCACTAGAGGGTTCACGCTCCTATGACAATCAAGGTCGCCACTaGTCTGACAGGAGGCCAAGCTCAGGCAATAATGCTAGTGATGGG | + |
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Preference number: 5 (lower is better) Translates to: SSLEGSRSYDNQGRH*SDRRPSSGNNASDG Trigger: CCCATCACTAGCATTATTGCCTGAGCTTGGCCTCCTGTCAGATCAGTGGCGACCTTGATTGTCATAGGAGCGTGAACCCTCTAGTGAACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000413185.2 |
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| CDS CCA 90 bp | CAAATTATGAGATGTCTCAGTCTAAGGTGTAGCCCAAGCAATCCTTaGGACAAGCTGATCGAGCTGGCTGGCCAGATCCCAAAGGTGGAG | + |
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Preference number: 5 (lower is better) Translates to: QIMRCLSLRCSPSNP*DKLIELAGQIPKVE Trigger: CTCCACCTTTGGGATCTGGCCAGCCAGCTCGATCAGCTTGTCCCAAGGATTGCTTGGGCTACACCTTAGACTGAGACATCTCATAATTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441997.5 |
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| CDS TCA 90 bp | AGAGACAGAGTCTGTTTCCTTCCCCTTGAATCTTGGCTGGCCCTATaGCTTGTGGAAGAAGTGACGTTCTGGGACTTCTGGGCCATAAGA | + |
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Preference number: 5 (lower is better) Translates to: RDRVCFLPLESWLAL*LVEEVTFWDFWAIR Trigger: TCTTATGGCCCAGAAGTCCCAGAACGTCACTTCTTCCACAAGTCATAGGGCCAGCCAAGATTCAAGGGGAAGGAAACAGACTCTGTCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000419035.1 ENST00000658129.1 |
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| CDS GCA 90 bp | AGGCAGCAGCAATGCTATCAGCAACTGGCCACTCATGGCAAGGGCTaGAAAACCTCATGGAGTTTGGGAGGATTAAATGAGTTCATCCGT | + |
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Preference number: 5 (lower is better) Translates to: RQQQCYQQLATHGKG*KTSWSLGGLNEFIR Trigger: ACGGATGAACTCATTTAATCCTCCCAAACTCCATGAGGTTTTGCAGCCCTTGCCATGAGTGGCCAGTTGCTGATAGCATTGCTGCTGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000419035.1 ENST00000658129.1 |
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| CDS GCA 90 bp | TCACTCTTTCTTCCTCTCTCTTTCCTTCTCTGTTACCTTCTCTGCTaGAGTCAGGCCTGCAGCCAGAAAAAGCCCAGATCTCCTGCCATT | + |
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Preference number: 5 (lower is better) Translates to: SLFLPLSFLLCYLLC*SQACSQKKPRSPAI Trigger: AATGGCAGGAGATCTGGGCTTTTTCTGGCTGCAGGCCTGACTGCAGCAGAGAAGGTAACAGAGAAGGAAAGAGAGAGGAAGAAAGAGTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000448713.5 |
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| CDS TCA 90 bp | CCCACCTTAAAAACACTGAAATCCAAGAAATTGGATTCTGGAATCTaGGGGCGAGGGAATCCCAGGGTTGTGGACACGCGGTCACATCAA | + |
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Preference number: 5 (lower is better) Translates to: PTLKTLKSKKLDSGI*GRGNPRVVDTRSHQ Trigger: TTGATGTGACCGCGTGTCCACAACCCTGGGATTCCCTCGCCCTCAGATTCCAGAATCCAATTTCTTGGATTTCAGTGTTTTTAAGGTGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000413185.2 ENST00000441997.5 ENST00000450550.5 |
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| CDS TCA 90 bp | TCATGGCAAGGGCTGCAAAACCTCATGGAGTTTGGGAGGATTAAATaGGTTCATCCGTATAAAGCTGTTAGTACGGCGTCTGGCACCTGG | + |
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Preference number: 5 (lower is better) Translates to: SWQGLQNLMEFGRIK*VHPYKAVSTASGTW Trigger: CCAGGTGCCAGACGCCGTACTAACAGCTTTATACGGATGAACTCATTTAATCCTCCCAAACTCCATGAGGTTTTGCAGCCCTTGCCATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000419035.1 ENST00000658129.1 |
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| CDS GCA 90 bp | GTCTGGCACCTGGTAAGGGCCCAGATGTCCACTGCTGTAGTGTATTaGAGTAGATTGTTTCCAAAGGTGGCTGCAACAATTTGTCCCATT | + |
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Preference number: 5 (lower is better) Translates to: VWHLVRAQMSTAVVY*SRLFPKVAATICPI Trigger: AATGGGACAAATTGTTGCAGCCACCTTTGGAAACAATCTACTGCAATACACTACAGCAGTGGACATCTGGGCCCTTACCAGGTGCCAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000419035.1 ENST00000658129.1 |
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| CDS GCA 90 bp | TATGGCGCCAGTAACATTAGAAGATGGACTCTCCTTTGTTTCTCTTaGCCGGAAGTAATTTCCTGGCATATCAGGGGGACCACCTGTCAG | + |
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Preference number: 5 (lower is better) Translates to: YGASNIRRWTLLCFS*PEVISWHIRGTTCQ Trigger: CTGACAGGTGGTCCCCCTGATATGCCAGGAAATTACTTCCGGGCAAGAGAAACAAAGGAGAGTCCATCTTCTAATGTTACTGGCGCCATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000419035.1 ENST00000658129.1 |
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| CDS TCA 90 bp | TTGGGCTTAAAAACACTGAAATCCAAGAAATTGGATTCTGGAATCTaGGGGCGAGGGAATCCCAGGGTTGTGGACACGCGGTCACATCAA | + |
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Preference number: 5 (lower is better) Translates to: LGLKTLKSKKLDSGI*GRGNPRVVDTRSHQ Trigger: TTGATGTGACCGCGTGTCCACAACCCTGGGATTCCCTCGCCCTCAGATTCCAGAATCCAATTTCTTGGATTTCAGTGTTTTTAAGCCCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000448713.5 |
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| CDS GCA 90 bp | TTTTCAGGCAAATTTCTGACTAGCCTGAGGCCAGTCCTCAGGTTTTaGAGGCTAGAATTTGCAAGAGAGAGAGAGAGGTTTCTAGCTGAC | + |
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Preference number: 5 (lower is better) Translates to: FSGKFLTSLRPVLRF*RLEFARERERFLAD Trigger: GTCAGCTAGAAACCTCTCTCTCTCTCTTGCAAATTCTAGCCTGCAAAACCTGAGGACTGGCCTCAGGCTAGTCAGAAATTTGCCTGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000419035.1 ENST00000658129.1 |
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| CDS TCA 90 bp | AGCCTTGAACTTGTTTTCTTGCAACTAGGCGATCCCATCTCGGAGTaGTGGGAGACAGTGACAGATCATCAAGCATTAGATTCTCACAAG | + |
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Preference number: 5 (lower is better) Translates to: SLELVFLQLGDPISE*WETVTDHQALDSHK Trigger: CTTGTGAGAATCTAATGCTTGATGATCTGTCACTGTCTCCCATCACTCCGAGATGGGATCGCCTAGTTGCAAGAAAACAAGTTCAAGGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000413185.2 |
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| CDS TCA 90 bp | GTTTTGCAGGCTAGAATTTGCAAGAGAGAGAGAGAGGTTTCTAGCTaGCACCTTGTTGGTATGGCGCCAGTAACATTAGAAGATGGACTC | + |
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Preference number: 5 (lower is better) Translates to: VLQARICKREREVSS*HLVGMAPVTLEDGL Trigger: GAGTCCATCTTCTAATGTTACTGGCGCCATACCAACAAGGTGTCAGCTAGAAACCTCTCTCTCTCTCTTGCAAATTCTAGCCTGCAAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000419035.1 ENST00000658129.1 |
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| CDS GCA 72 bp | TCGCCCCAGGACCAGCCGCAGCTCCACGGTGGGCGGTaGTGGCAAGGCTTGCTTGAGAAATGGAGGAGAAGC | + |
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Preference number: 6 (lower is better) Translates to: SPQDQPQLHGGR*WQGLLEKWRRS Trigger: GCTTCTCCTCCATTTCTCAAGCAAGCCTTGCCAGCACCGCCCACCGTGGAGCTGCGGCTGGTCCTGGGGCGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000448713.5 |
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| CDS CCA 72 bp | CCCCAGGACCAGCCGCAGCTCCACGGTGGGCGGTGCTaGCAAGGCTTGCTTGAGAAATGGAGGAGAAGCCAG | + |
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Preference number: 6 (lower is better) Translates to: PQDQPQLHGGRC*QGLLEKWRRSQ Trigger: CTGGCTTCTCCTCCATTTCTCAAGCAAGCCTTGCCAGCACCGCCCACCGTGGAGCTGCGGCTGGTCCTGGGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000448713.5 |
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| CDS TCA 72 bp | CTGGCTGGCCAGATCCCAAAGGTGGAGATGACAGGGTaGGTGCAGACCCTCACAGGCACAGGGAGGGTGAGG | + |
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Preference number: 6 (lower is better) Translates to: LAGQIPKVEMTG*VQTLTGTGRVR Trigger: CCTCACCCTCCCTGTGCCTGTGAGGGTCTGCACTCACCCTGTCATCTCCACCTTTGGGATCTGGCCAGCCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441997.5 |
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| CDS CAA 90 bp | CCCCAGGACCAGCCGCAGCTCCACGGTGGGCGGTGCTGGCAAGGCTaGCTTGAGAAATGGAGGAGAAGCCAGTCTCTCTCTCTCACTCTT | + |
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Preference number: 6 (lower is better) Translates to: PQDQPQLHGGRCWQG*LEKWRRSQSLSLTL Trigger: AAGAGTGAGAGAGAGAGACTGGCTTCTCCTCCATTTCTCAAGCAAGCCTTGCCAGCACCGCCCACCGTGGAGCTGCGGCTGGTCCTGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000448713.5 |
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| CDS GCA 72 bp | GGGAGGGTGAGGAGTAGGAGGTGGGCTGCCCGTGACTaGATATCCATGCACAGTTCACCAGCTCCAGGAGTC | + |
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Preference number: 6 (lower is better) Translates to: GRVRSRRWAARD*ISMHSSPAPGV Trigger: GACTCCTGGAGCTGGTGAACTGTGCATGGATATGCAGTCACGGGCAGCCCACCTCCTACTCCTCACCCTCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000413185.2 ENST00000441997.5 ENST00000450550.5 |
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| CDS CAA 72 bp | CAGCCGCAGCTCCACGGTGGGCGGTGCTGGCAAGGCTaGCTTGAGAAATGGAGGAGAAGCCAGTCTCTCTCT | + |
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Preference number: 6 (lower is better) Translates to: QPQLHGGRCWQG*LEKWRRSQSLS Trigger: AGAGAGAGACTGGCTTCTCCTCCATTTCTCAAGCAAGCCTTGCCAGCACCGCCCACCGTGGAGCTGCGGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000448713.5 |
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| CDS GCA 72 bp | GGAGTAGGAGGTGGGCTGCCCGTGACTGCATATCCATaGACAGTTCACCAGCTCCAGGAGTCTTCCTCTGGC | + |
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Preference number: 6 (lower is better) Translates to: GVGGGLPVTAYP*TVHQLQESSSG Trigger: GCCAGAGGAAGACTCCTGGAGCTGGTGAACTGTGCATGGATATGCAGTCACGGGCAGCCCACCTCCTACTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000413185.2 ENST00000441997.5 ENST00000450550.5 |
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| CDS CCA 72 bp | ACCCTCACAGGCACAGGGAGGGTGAGGAGTAGGAGGTaGGCTGCCCGTGACTGCATATCCATGCACAGTTCA | + |
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Preference number: 6 (lower is better) Translates to: TLTGTGRVRSRR*AARDCISMHSS Trigger: TGAACTGTGCATGGATATGCAGTCACGGGCAGCCCACCTCCTACTCCTCACCCTCCCTGTGCCTGTGAGGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000413185.2 ENST00000441997.5 ENST00000450550.5 |
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| CDS CAA 72 bp | CGCAGCTCCACGGTGGGCGGTGCTGGCAAGGCTTGCTaGAGAAATGGAGGAGAAGCCAGTCTCTCTCTCTCA | + |
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Preference number: 6 (lower is better) Translates to: RSSTVGGAGKAC*RNGGEASLSLS Trigger: TGAGAGAGAGAGACTGGCTTCTCCTCCATTTCTCAAGCAAGCCTTGCCAGCACCGCCCACCGTGGAGCTGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000448713.5 |
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| CDS CAA 90 bp | GGAGGCCACATGGAGACAGTGAAACCCCAGAGGATGAGAAACCACTaGAAAAAGAGCGAAGGCACCCAGTGGACAGCCAGCACCCGCCGC | + |
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Preference number: 6 (lower is better) Translates to: GGHMETVKPQRMRNH*KKSEGTQWTASTRR Trigger: GCGGCGGGTGCTGGCTGTCCACTGGGTGCCTTCGCTCTTTTTCAAGTGGTTTCTCATCCTCTGGGGTTTCACTGTCTCCATGTGGCCTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000419035.1 ENST00000658129.1 |
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| CDS CCA 72 bp | CCCAAGCAATCCTTGGGACAAGCTGATCGAGCTGGCTaGCCAGATCCCAAAGGTGGAGATGACAGGGTGAGT | + |
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Preference number: 6 (lower is better) Translates to: PKQSLGQADRAG*PDPKGGDDRVS Trigger: ACTCACCCTGTCATCTCCACCTTTGGGATCTGGCCAGCCAGCTCGATCAGCTTGTCCCAAGGATTGCTTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000441997.5 |
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| CDS CAA 90 bp | CCTCTCTTGGGCAAGCCTTACTTCCATGTCAGAGTTGCCAGGTCTTaGAGAGCAGGAGCTGTATGCTGCTCAGCTCTGCATTCGCCCCAG | + |
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Preference number: 6 (lower is better) Translates to: PLLGKPYFHVRVARS*RAGAVCCSALHSPQ Trigger: CTGGGGCGAATGCAGAGCTGAGCAGCATACAGCTCCTGCTCTCAAAGACCTGGCAACTCTGACATGGAAGTAAGGCTTGCCCAAGAGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000448713.5 |
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| CDS CCA 72 bp | CAGGCAGCAGCAATGCTATCAGCAACTGGCCACTCATaGCAAGGGCTGCAAAACCTCATGGAGTTTGGGAGG | + |
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Preference number: 6 (lower is better) Translates to: QAAAMLSATGHS*QGLQNLMEFGR Trigger: CCTCCCAAACTCCATGAGGTTTTGCAGCCCTTGCCATGAGTGGCCAGTTGCTGATAGCATTGCTGCTGCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000419035.1 ENST00000658129.1 |
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| CDS CAA 90 bp | GGTCTGGAGGCATCCAGCAGTGCAGCCCTTAGTCACTCTCCTCTCTaGGGCAAGCCTTACTTCCATGTCAGAGTTGCCAGGTCTTTGAGA | + |
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Preference number: 6 (lower is better) Translates to: GLEASSSAALSHSPL*GKPYFHVRVARSLR Trigger: TCTCAAAGACCTGGCAACTCTGACATGGAAGTAAGGCTTGCCCAAGAGAGGAGAGTGACTAAGGGCTGCACTGCTGGATGCCTCCAGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000448713.5 |
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| CDS CCA 72 bp | CATCCAGCAGTGCAGCCCTTAGTCACTCTCCTCTCTTaGGCAAGCCTTACTTCCATGTCAGAGTTGCCAGGT | + |
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Preference number: 6 (lower is better) Translates to: HPAVQPLVTLLS*ASLTSMSELPG Trigger: ACCTGGCAACTCTGACATGGAAGTAAGGCTTGCCCAAGAGAGGAGAGTGACTAAGGGCTGCACTGCTGGATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000448713.5 |
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| CDS TCA 72 bp | GAGGGTTCACGCTCCTATGACAATCAAGGTCGCCACTaGTCTGACAGGAGGCCAAGCTCAGGCAATAATGCT | + |
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Preference number: 6 (lower is better) Translates to: EGSRSYDNQGRH*SDRRPSSGNNA Trigger: AGCATTATTGCCTGAGCTTGGCCTCCTGTCAGATCAGTGGCGACCTTGATTGTCATAGGAGCGTGAACCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000413185.2 |
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| CDS TCA 72 bp | GTCTGTTTCCTTCCCCTTGAATCTTGGCTGGCCCTATaGCTTGTGGAAGAAGTGACGTTCTGGGACTTCTGG | + |
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Preference number: 6 (lower is better) Translates to: VCFLPLESWLAL*LVEEVTFWDFW Trigger: CCAGAAGTCCCAGAACGTCACTTCTTCCACAAGTCATAGGGCCAGCCAAGATTCAAGGGGAAGGAAACAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000419035.1 ENST00000658129.1 |
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| CDS CCA 72 bp | AGAATAGCAACAGGCAGCAGCAATGCTATCAGCAACTaGCCACTCATGGCAAGGGCTGCAAAACCTCATGGA | + |
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Preference number: 6 (lower is better) Translates to: RIATGSSNAISN*PLMARAAKPHG Trigger: TCCATGAGGTTTTGCAGCCCTTGCCATGAGTGGCCAGTTGCTGATAGCATTGCTGCTGCCTGTTGCTATTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000419035.1 ENST00000658129.1 |
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| CDS TCA 72 bp | AAAACACTGAAATCCAAGAAATTGGATTCTGGAATCTaGGGGCGAGGGAATCCCAGGGTTGTGGACACGCGG | + |
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Preference number: 6 (lower is better) Translates to: KTLKSKKLDSGI*GRGNPRVVDTR Trigger: CCGCGTGTCCACAACCCTGGGATTCCCTCGCCCTCAGATTCCAGAATCCAATTTCTTGGATTTCAGTGTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000413185.2 ENST00000441997.5 ENST00000448713.5 ENST00000450550.5 |
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| CDS CCA 72 bp | ACTCTCCTTTGTTTCTCTTGCCCGGAAGTAATTTCCTaGCATATCAGGGGGACCACCTGTCAGCACTCCAAA | + |
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Preference number: 6 (lower is better) Translates to: TLLCFSCPEVIS*HIRGTTCQHSK Trigger: TTTGGAGTGCTGACAGGTGGTCCCCCTGATATGCCAGGAAATTACTTCCGGGCAAGAGAAACAAAGGAGAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000419035.1 ENST00000658129.1 |
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| CDS CAA 72 bp | TGGATTCTGGAATCTGAGGGCGAGGGAATCCCAGGGTaGTGGACACGCGGTCACATCAACAACAAAAACAAA | + |
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Preference number: 6 (lower is better) Translates to: WILESEGEGIPG*WTRGHINNKNK Trigger: TTTGTTTTTGTTGTTGATGTGACCGCGTGTCCACAACCCTGGGATTCCCTCGCCCTCAGATTCCAGAATCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000441997.5 |
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| CDS GCA 72 bp | ATTAGATTCTCACAAGGAGAGTGCAACCTAGATCTCTaGCATGCGCAGTTCACTAGAGGGTTCACGCTCCTA | + |
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Preference number: 6 (lower is better) Translates to: IRFSQGECNLDL*HAQFTRGFTLL Trigger: TAGGAGCGTGAACCCTCTAGTGAACTGCGCATGGCAGAGATCTAGGTTGCACTCTCCTTGTGAGAATCTAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000413185.2 |
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| CDS GCA 72 bp | CAATGCTATCAGCAACTGGCCACTCATGGCAAGGGCTaGAAAACCTCATGGAGTTTGGGAGGATTAAATGAG | + |
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Preference number: 6 (lower is better) Translates to: QCYQQLATHGKG*KTSWSLGGLNE Trigger: CTCATTTAATCCTCCCAAACTCCATGAGGTTTTGCAGCCCTTGCCATGAGTGGCCAGTTGCTGATAGCATTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000419035.1 ENST00000658129.1 |
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| CDS CCA 72 bp | ACCTACACTGTACCATCAATAGGCAACACAGGGTCATaGGTAGAAACTAGGCTCTGGAGGCTTCACTGGATT | + |
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Preference number: 6 (lower is better) Translates to: TYTVPSIGNTGS*VETRLWRLHWI Trigger: AATCCAGTGAAGCCTCCAGAGCCTAGTTTCTACCCATGACCCTGTGTTGCCTATTGATGGTACAGTGTAGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000419035.1 ENST00000658129.1 |
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| CDS CCA 72 bp | ATTCTGGAATCTGAGGGCGAGGGAATCCCAGGGTTGTaGACACGCGGTCACATCAACAACAAAAACAAAAAG | + |
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Preference number: 6 (lower is better) Translates to: ILESEGEGIPGL*TRGHINNKNKK Trigger: CTTTTTGTTTTTGTTGTTGATGTGACCGCGTGTCCACAACCCTGGGATTCCCTCGCCCTCAGATTCCAGAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000441997.5 |
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| CDS CAA 90 bp | CAGCAACTGGCCACTCATGGCAAGGGCTGCAAAACCTCATGGAGTTaGGGAGGATTAAATGAGTTCATCCGTATAAAGCTGTTAGTACGG | + |
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Preference number: 6 (lower is better) Translates to: QQLATHGKGCKTSWS*GGLNEFIRIKLLVR Trigger: CCGTACTAACAGCTTTATACGGATGAACTCATTTAATCCTCCCAAACTCCATGAGGTTTTGCAGCCCTTGCCATGAGTGGCCAGTTGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000419035.1 ENST00000658129.1 |
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| CDS TCA 72 bp | ATAATGCTAGTGATGGGGAGTGGCTGTAAATACAGATaGAGCTTGATTTGCTTGCCTGCCACTCACCTCCTG | + |
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Preference number: 6 (lower is better) Translates to: IMLVMGSGCKYR*SLICLPATHLL Trigger: CAGGAGGTGAGTGGCAGGCAAGCAAATCAAGCTTCATCTGTATTTACAGCCACTCCCCATCACTAGCATTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000413185.2 |
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| CDS CCA 72 bp | CAACTGGCCACTCATGGCAAGGGCTGCAAAACCTCATaGAGTTTGGGAGGATTAAATGAGTTCATCCGTATA | + |
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Preference number: 6 (lower is better) Translates to: QLATHGKGCKTS*SLGGLNEFIRI Trigger: TATACGGATGAACTCATTTAATCCTCCCAAACTCCATGAGGTTTTGCAGCCCTTGCCATGAGTGGCCAGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000419035.1 ENST00000658129.1 |
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| CDS CCA 72 bp | GGGCTTAAAAACACTGAAATCCAAGAAATTGGATTCTaGAATCTGAGGGCGAGGGAATCCCAGGGTTGTGGA | + |
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Preference number: 6 (lower is better) Translates to: GLKNTEIQEIGF*NLRARESQGCG Trigger: TCCACAACCCTGGGATTCCCTCGCCCTCAGATTCCAGAATCCAATTTCTTGGATTTCAGTGTTTTTAAGCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000448713.5 |
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| CDS TCA 72 bp | CTTGTTTTCTTGCAACTAGGCGATCCCATCTCGGAGTaGTGGGAGACAGTGACAGATCATCAAGCATTAGAT | + |
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Preference number: 6 (lower is better) Translates to: LVFLQLGDPISE*WETVTDHQALD Trigger: ATCTAATGCTTGATGATCTGTCACTGTCTCCCATCACTCCGAGATGGGATCGCCTAGTTGCAAGAAAACAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000413185.2 |
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| CDS GCA 72 bp | AGTAACATTAGAAGATGGACTCTCCTTTGTTTCTCTTaGCCGGAAGTAATTTCCTGGCATATCAGGGGGACC | + |
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Preference number: 6 (lower is better) Translates to: SNIRRWTLLCFS*PEVISWHIRGT Trigger: GGTCCCCCTGATATGCCAGGAAATTACTTCCGGGCAAGAGAAACAAAGGAGAGTCCATCTTCTAATGTTACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000419035.1 ENST00000658129.1 |
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| CDS GCA 72 bp | AAATTTCTGACTAGCCTGAGGCCAGTCCTCAGGTTTTaGAGGCTAGAATTTGCAAGAGAGAGAGAGAGGTTT | + |
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Preference number: 6 (lower is better) Translates to: KFLTSLRPVLRF*RLEFARERERF Trigger: AAACCTCTCTCTCTCTCTTGCAAATTCTAGCCTGCAAAACCTGAGGACTGGCCTCAGGCTAGTCAGAAATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000419035.1 ENST00000658129.1 |
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| CDS CCA 72 bp | CACCTTAAAAACACTGAAATCCAAGAAATTGGATTCTaGAATCTGAGGGCGAGGGAATCCCAGGGTTGTGGA | + |
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Preference number: 6 (lower is better) Translates to: HLKNTEIQEIGF*NLRARESQGCG Trigger: TCCACAACCCTGGGATTCCCTCGCCCTCAGATTCCAGAATCCAATTTCTTGGATTTCAGTGTTTTTAAGGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000413185.2 ENST00000441997.5 ENST00000450550.5 |
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| CDS CAA 72 bp | GCCCAGATGTCCACTGCTGTAGTGTATTGCAGTAGATaGTTTCCAAAGGTGGCTGCAACAATTTGTCCCATT | + |
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Preference number: 6 (lower is better) Translates to: AQMSTAVVYCSR*FPKVAATICPI Trigger: AATGGGACAAATTGTTGCAGCCACCTTTGGAAACAATCTACTGCAATACACTACAGCAGTGGACATCTGGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000419035.1 ENST00000658129.1 |
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| CDS TCA 72 bp | GCTAGAATTTGCAAGAGAGAGAGAGAGGTTTCTAGCTaGCACCTTGTTGGTATGGCGCCAGTAACATTAGAA | + |
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Preference number: 6 (lower is better) Translates to: ARICKREREVSS*HLVGMAPVTLE Trigger: TTCTAATGTTACTGGCGCCATACCAACAAGGTGTCAGCTAGAAACCTCTCTCTCTCTCTTGCAAATTCTAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000419035.1 ENST00000658129.1 |
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| CDS CCA 72 bp | ACACCTTGTTGGTATGGCGCCAGTAACATTAGAAGATaGACTCTCCTTTGTTTCTCTTGCCCGGAAGTAATT | + |
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Preference number: 6 (lower is better) Translates to: TPCWYGASNIRR*TLLCFSCPEVI Trigger: AATTACTTCCGGGCAAGAGAAACAAAGGAGAGTCCATCTTCTAATGTTACTGGCGCCATACCAACAAGGTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000419035.1 ENST00000658129.1 |
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| CDS TCA 72 bp | GAGGCTTCACTGGATTTGGATTCAGGCTCTGTGACATaGGTGACCTTGACCAAATCATGTGATCTATTTAAG | + |
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Preference number: 6 (lower is better) Translates to: EASLDLDSGSVT*VTLTKSCDLFK Trigger: CTTAAATAGATCACATGATTTGGTCAAGGTCACTCATGTCACAGAGCCTGAATCCAAATCCAGTGAAGCCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000419035.1 ENST00000658129.1 |
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| CDS TCA 72 bp | GACCCCTGCCCTAGAAGAGTTCTTCATCTGTACTCATaGAAAGTTGATAAGTCACCTAAATCACCTTTAATA | + |
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Preference number: 6 (lower is better) Translates to: DPCPRRVLHLYS*KVDKSPKSPLI Trigger: TATTAAAGGTGATTTAGGTGACTTATCAACTTTTCATGAGTACAGATGAAGAACTCTTCTAGGGCAGGGGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000413185.2 |
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