RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EPC1 (Homo sapiens)

Ensembl gene IDs: ENSG00000120616

Ensembl transcript IDs: ENST00000263062.8, ENST00000319778.11, ENST00000375110.6, ENST00000469059.2, ENST00000479380.2, ENST00000480402.1, ENST00000495790.1, ENST00000667706.1

Found 570 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGACGCCATTCACCCCGATTCCAAGCACCACATCATCCTTCATCTTaGATCCCATCAGTTGTTCTGATGTCACCAAAGCAGAAGCAGCAA +
Preference number: 1 (lower is better)
Translates to: GRHSPRFQAPHHPSS*IPSVVLMSPKQKQQ
Trigger: TTGCTGCTTCTGCTTTGGTGACATCAGAACAACTGATGGGATTCAAGATGAAGGATGATGTGGTGCTTGGAATCGGGGTGAATGGCGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000667706.1
3UTR GCA 90 bp AGCATTGCTGTCAAGTCCCCACAGCTGCCACAGAAACGCATGTGCTaGTTTCCATCATCCCTTGCATTCAAAATGCTACTGATGCATAGC +
Preference number: 1 (lower is better)
Translates to: SIAVKSPQLPQKRMC*FPSSLAFKMLLMHS
Trigger: GCTATGCATCAGTAGCATTTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGGACTTGACAGCAATGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
3UTR TCA 90 bp CTTGGAACTGAATCTACAGAGGATGAAGATGGGACCTTGGAAACTTaGCAGTTTGCTGCAGCGGCCAGCTTTAAGGCAGATGATGGAACA +
Preference number: 1 (lower is better)
Translates to: LGTESTEDEDGTLET*QFAAAASFKADDGT
Trigger: TGTTCCATCATCTGCCTTAAAGCTGGCCGCTGCAGCAAACTGTCAAGTTTCCAAGGTCCCATCTTCATCCTCTGTAGATTCAGTTCCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667706.1
3UTR GCA 90 bp ATGAGCATTGCTGTCAAGTCCCCACAGCTGCCACAGAAACGCATGTaGTGCTTTCCATCATCCCTTGCATTCAAAATGCTACTGATGCAT +
Preference number: 1 (lower is better)
Translates to: MSIAVKSPQLPQKRM*CFPSSLAFKMLLMH
Trigger: ATGCATCAGTAGCATTTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGGACTTGACAGCAATGCTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
3UTR CCA 90 bp GATTTTCCCTTGGAACTGAATCTACAGAGGATGAAGATGGGACCTTaGAAACTTGACAGTTTGCTGCAGCGGCCAGCTTTAAGGCAGATG +
Preference number: 1 (lower is better)
Translates to: DFPLELNLQRMKMGP*KLDSLLQRPALRQM
Trigger: CATCTGCCTTAAAGCTGGCCGCTGCAGCAAACTGTCAAGTTTCCAAGGTCCCATCTTCATCCTCTGTAGATTCAGTTCCAAGGGAAAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000667706.1
3UTR TCA 90 bp TCCAAGCACCACATCATCCTTCATCTTGAATCCCATCAGTTGTTCTaGTGTCACCAAAGCAGAAGCAGCAAACTGTGCACTAGCAGAATC +
Preference number: 1 (lower is better)
Translates to: SKHHIILHLESHQLF*CHQSRSSKLCTSRI
Trigger: GATTCTGCTAGTGCACAGTTTGCTGCTTCTGCTTTGGTGACATCAGAACAACTGATGGGATTCAAGATGAAGGATGATGTGGTGCTTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667706.1
3UTR CCA 90 bp TTAATCGAATGTTGTTCCCAATCAGAACCTGAGTTGTTGCAGAATTaGCAGCAGTTACTTGATGACTCAGTGCACTGTGGGAACTTGAAG +
Preference number: 1 (lower is better)
Translates to: LIECCSQSEPELLQN*QQLLDDSVHCGNLK
Trigger: CTTCAAGTTCCCACAGTGCACTGAGTCATCAAGTAACTGCTGCCAATTCTGCAACAACTCAGGTTCTGATTGGGAACAACATTCGATTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667706.1
3UTR CCA 90 bp TTTAAGTACCAGAAACCACCCACAGCTTTGTGGGCAAGTTGGGGATaGAAAGATTCAAGAGACTTCATTTTTAGCTTGTTACTTGTCCTA +
Preference number: 1 (lower is better)
Translates to: FKYQKPPTALWASWG*KDSRDFIFSLLLVL
Trigger: TAGGACAAGTAACAAGCTAAAAATGAAGTCTCTTGAATCTTTCCATCCCCAACTTGCCCACAAAGCTGTGGGTGGTTTCTGGTACTTAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
3UTR GCA 90 bp ATCACAATTTTTCCAGGTGGGATTAAAAACCTTAAGGATAATGTATaGCATTGGACTGGGCATTCAGACTTCGGTACTGACAAAGCACTA +
Preference number: 1 (lower is better)
Translates to: ITIFPGGIKNLKDNV*HWTGHSDFGTDKAL
Trigger: TAGTGCTTTGTCAGTACCGAAGTCTGAATGCCCAGTCCAATGGCATACATTATCCTTAAGGTTTTTAATCCCACCTGGAAAAATTGTGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
3UTR CCA 90 bp ATTTTTCCAGGTGGGATTAAAAACCTTAAGGATAATGTATGCCATTaGACTGGGCATTCAGACTTCGGTACTGACAAAGCACTAGTAGTA +
Preference number: 1 (lower is better)
Translates to: IFPGGIKNLKDNVCH*TGHSDFGTDKALVV
Trigger: TACTACTAGTGCTTTGTCAGTACCGAAGTCTGAATGCCCAGTCCAATGGCATACATTATCCTTAAGGTTTTTAATCCCACCTGGAAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
3UTR-3UTR TCA 90 bp AAGATGGGACCTTGGAAACTTGACAGTTTGCTGCAGCGGCCAGCTTTAAGGCAGTCCGCACCATGCACATaGTGTGATGACACTTCATCT +
Preference number: 2 (lower is better)
Translates to: KMGPWKLDSLLQRPALRQSAPCT*CDDTSS
Trigger: AGATGAAGTGTCATCACATCATGTGCATGGTGCGGA...CTGCCTTAAAGCTGGCCGCTGCAGCAAACTGTCAAGTTTCCAAGGTCCCATCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667706.1
3UTR-3UTR TCA 90 bp CAGAATTGGCAGCAGTTACTTGATGACTCAGTGCACTGTGGGAACTTGAAGTCTGCCCTTGTATACTCCTaGGGCTGGAAGGACGCCATT +
Preference number: 2 (lower is better)
Translates to: QNWQQLLDDSVHCGNLKSALVYS*GWKDAI
Trigger: AATGGCGTCCTTCCAGCCTCAGGAGTATACAAGGGC...AGACTTCAAGTTCCCACAGTGCACTGAGTCATCAAGTAACTGCTGCCAATTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667706.1
3UTR-3UTR GCA 90 bp CTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAAATGCTAATCAAGTCCCCAGGCTaGAGTTCCACTCGGAGGAAG +
Preference number: 2 (lower is better)
Translates to: LPQKRMCCFPSSLAFKMLIKSPG*SSTRRK
Trigger: CTTCCTCCGAGTGGAACTGCAGCCTGGGGACTTGAT...TAGCATTTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
3UTR CAA 90 bp AGGACGCCATTCACCCCGATTCCAAGCACCACATCATCCTTCATCTaGAATCCCATCAGTTGTTCTGATGTCACCAAAGCAGAAGCAGCA +
Preference number: 2 (lower is better)
Translates to: RTPFTPIPSTTSSFI*NPISCSDVTKAEAA
Trigger: TGCTGCTTCTGCTTTGGTGACATCAGAACAACTGATGGGATTCAAGATGAAGGATGATGTGGTGCTTGGAATCGGGGTGAATGGCGTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000667706.1
3UTR-3UTR TCA 90 bp ATGAGCATTGCTGTCAAGTCCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTCAGTGCTGGCTTTTCTaGTTCATGATTTTCCCTTGG +
Preference number: 2 (lower is better)
Translates to: MSIAVKSPQLPQKRMCCFQCWLF*FMIFPW
Trigger: CCAAGGGAAAATCATGAATCAGAAAAGCCAGCACTG...AAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGGACTTGACAGCAATGCTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000667706.1
3UTR-3UTR GCA 90 bp CAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAAATGCTACTGATGATCAAGTCCCCAGGCTaGAGTTCCACTCGGAGGAAG +
Preference number: 2 (lower is better)
Translates to: QKRMCCFPSSLAFKMLLMIKSPG*SSTRRK
Trigger: CTTCCTCCGAGTGGAACTGCAGCCTGGGGACTTGAT...CATCAGTAGCATTTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
3UTR-3UTR GCA 90 bp AAGATGGGACCTTGGAAACTTGACAGTTTGCTGCAGCGGCCAGCTTTAAGGCAGCTGTTTCTGCATGAGTaGCAGTTGCTGTTGATGTTG +
Preference number: 2 (lower is better)
Translates to: KMGPWKLDSLLQRPALRQLFLHE*QLLLML
Trigger: CAACATCAACAGCAACTGGCACTCATGCAGAAACAG...CTGCCTTAAAGCTGGCCGCTGCAGCAAACTGTCAAGTTTCCAAGGTCCCATCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667706.1
3UTR-3UTR CCA 90 bp ATGAGCATTGCTGTCAAGTCCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTTGGGCAAGTTGGGGATaGAAAGATTCAAGAGACTTC +
Preference number: 2 (lower is better)
Translates to: MSIAVKSPQLPQKRMCCFWASWG*KDSRDF
Trigger: GAAGTCTCTTGAATCTTTCCATCCCCAACTTGCCCA...AAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGGACTTGACAGCAATGCTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
3UTR CAA 90 bp CTGAATCTACAGAGGATGAAGATGGGACCTTGGAAACTTGACAGTTaGCTGCAGCGGCCAGCTTTAAGGCAGATGATGGAACAGCACTTA +
Preference number: 2 (lower is better)
Translates to: LNLQRMKMGPWKLDS*LQRPALRQMMEQHL
Trigger: TAAGTGCTGTTCCATCATCTGCCTTAAAGCTGGCCGCTGCAGCAAACTGTCAAGTTTCCAAGGTCCCATCTTCATCCTCTGTAGATTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667706.1
3UTR-3UTR TCA 90 bp GCTGTCAAGTCCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCATTCAAAATGCTACTaGTGCATAGCACCTAATCAA +
Preference number: 2 (lower is better)
Translates to: AVKSPQLPQKRMCCFPSSHSKCY*CIAPNQ
Trigger: TTGATTAGGTGCTATGCATCAGTAGCATTTTGAATG...GGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGGACTTGACAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
3UTR-3UTR TCA 90 bp GTGCTGAAAGTCAGTGCCCAACTAGACAATCTGAGCTACTACATACACTTGGCTACTCCTGGACTTCCTTaGACTGTCAATACACTGCAC +
Preference number: 2 (lower is better)
Translates to: VLKVSAQLDNLSYYIHLATPGLP*TVNTLH
Trigger: GTGCAGTGTATTGACAGTTCAAGGAAGTCCAGGAGT...AGCCAAGTGTATGTAGTAGCTCAGATTGTCTAGTTGGGCACTGACTTTCAGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469059.2
3UTR-3UTR GCA 90 bp GATACACAGAAAACTCAAGGACCCAGAGGGGAACCAAGTTATGTTATACCATTTATCAAGTCCCCAGGCTaGAGTTCCACTCGGAGGAAG +
Preference number: 2 (lower is better)
Translates to: DTQKTQGPRGEPSYVIPFIKSPG*SSTRRK
Trigger: CTTCCTCCGAGTGGAACTGCAGCCTGGGGACTTGAT...AAATGGTATAACATAACTTGGTTCCCCTCTGGGTCCTTGAGTTTTCTGTGTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
3UTR-3UTR GCA 90 bp AGTTGTTGCAGAATTGGCAGCAGTTACTTGATGACTCAGTGCACTGTGGGAACTATGAGAGATGAGCATTaGTGTCAAGTCCCCACAGCT +
Preference number: 2 (lower is better)
Translates to: SCCRIGSSYLMTQCTVGTMRDEH*CQVPTA
Trigger: AGCTGTGGGGACTTGACAGCAATGCTCATCTCTCAT...AGTTCCCACAGTGCACTGAGTCATCAAGTAACTGCTGCCAATTCTGCAACAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000667706.1
3UTR-3UTR CCA 90 bp TTAAGGATAATGTATGCCATTGGACTGGGCATTCAGACTTCGGTACTGACAAAGAGGAAATGGGACTACTaGGCTGTTCGCAGAGCAGCA +
Preference number: 2 (lower is better)
Translates to: LRIMYAIGLGIQTSVLTKRKWDY*AVRRAA
Trigger: TGCTGCTCTGCGAACAGCCCAGTAGTCCCATTTCCT...CTTTGTCAGTACCGAAGTCTGAATGCCCAGTCCAATGGCATACATTATCCTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
3UTR-3UTR CCA 90 bp TGTGCTGAAAGTCAGTGCCCAACTAGACAATCTGAGCTACTACATACACTTGGCAATCCACGCGACTCCTaGACTTCCTTGAACTGTCAA +
Preference number: 2 (lower is better)
Translates to: CAESQCPTRQSELLHTLGNPRDS*TSLNCQ
Trigger: TTGACAGTTCAAGGAAGTCCAGGAGTCGCGTGGATT...GCCAAGTGTATGTAGTAGCTCAGATTGTCTAGTTGGGCACTGACTTTCAGCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469059.2
3UTR-3UTR GCA 90 bp TACACAGAAAACTCAAGGACCCAGAGGGGAACCAAGTTATGTTATACCATTTACTCAAGTCCCCACAGCTaGCACAGAAACGCATGTGCT +
Preference number: 2 (lower is better)
Translates to: YTENSRTQRGTKLCYTIYSSPHS*HRNACA
Trigger: AGCACATGCGTTTCTGTGGCAGCTGTGGGGACTTGA...GTAAATGGTATAACATAACTTGGTTCCCCTCTGGGTCCTTGAGTTTTCTGTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
3UTR CAA 90 bp AAGGTACAGTTAATCGAATGTTGTTCCCAATCAGAACCTGAGTTGTaGCAGAATTGGCAGCAGTTACTTGATGACTCAGTGCACTGTGGG +
Preference number: 2 (lower is better)
Translates to: KVQLIECCSQSEPEL*QNWQQLLDDSVHCG
Trigger: CCCACAGTGCACTGAGTCATCAAGTAACTGCTGCCAATTCTGCAACAACTCAGGTTCTGATTGGGAACAACATTCGATTAACTGTACCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667706.1
3UTR-3UTR GCA 90 bp TGGCTGTTTTTAGAAACTGGAATGATGATACACGTACAGCAATTACTGCATTCTATCAAGTCCCCAGGCTaGAGTTCCACTCGGAGGAAG +
Preference number: 2 (lower is better)
Translates to: WLFLETGMMIHVQQLLHSIKSPG*SSTRRK
Trigger: CTTCCTCCGAGTGGAACTGCAGCCTGGGGACTTGAT...AGAATGCAGTAATTGCTGTACGTGTATCATCATTCCAGTTTCTAAAAACAGCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
3UTR-3UTR GCA 90 bp AACTCAAGGACCCAGAGGGGAACCAAGTTATGTTATACCATTTACAAAATACCATCAAGTCCCCACAGCTaGCACAGAAACGCATGTGCT +
Preference number: 2 (lower is better)
Translates to: NSRTQRGTKLCYTIYKIPSSPHS*HRNACA
Trigger: AGCACATGCGTTTCTGTGGCAGCTGTGGGGACTTGA...TGGTATTTTGTAAATGGTATAACATAACTTGGTTCCCCTCTGGGTCCTTGAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
3UTR-3UTR GCA 90 bp CTGATGAAGGTACAGTTAATCGAATGTTGTTCCCAATCAGAACCTGAGTTGTTGGCAAGCTGCTGTTTCTaGATGAGTGCCAGTTGCTGT +
Preference number: 2 (lower is better)
Translates to: LMKVQLIECCSQSEPELLASCCF*MSASCC
Trigger: ACAGCAACTGGCACTCATGCAGAAACAGCAGCTTGC...CAACAACTCAGGTTCTGATTGGGAACAACATTCGATTAACTGTACCTTCATCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667706.1
3UTR-3UTR CCA 90 bp AACTCAAGGACCCAGAGGGGAACCAAGTTATGTTATACCATTTACAAAATACCACCACCCACAGCTTTGTaGGCAAGTTGGGGATGGAAA +
Preference number: 2 (lower is better)
Translates to: NSRTQRGTKLCYTIYKIPPPTAL*ASWGWK
Trigger: TTTCCATCCCCAACTTGCCCACAAAGCTGTGGGTGG...TGGTATTTTGTAAATGGTATAACATAACTTGGTTCCCCTCTGGGTCCTTGAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
3UTR CAA 90 bp TCACAGAAGAGAGGTCAAATATTTCCAAAGGAAGGCACCCGATATTaGTGGTTCTGGCCTTGCAGCCTTCTGGAGAATCTTAAAAGGAAA +
Preference number: 2 (lower is better)
Translates to: SQKRGQIFPKEGTRY*WFWPCSLLENLKRK
Trigger: TTTCCTTTTAAGATTCTCCAGAAGGCTGCAAGGCCAGAACCACAAATATCGGGTGCCTTCCTTTGGAAATATTTGACCTCTCTTCTGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
3UTR-3UTR TCA 90 bp TTTACAAAATACCAAGGAGTCCACAGCTACCTAACACATTTACTACAGCACAGGTCCGCACCATGCACATaGTGTGATGACACTTCATCT +
Preference number: 2 (lower is better)
Translates to: FTKYQGVHSYLTHLLQHRSAPCT*CDDTSS
Trigger: AGATGAAGTGTCATCACATCATGTGCATGGTGCGGA...CCTGTGCTGTAGTAAATGTGTTAGGTAGCTGTGGACTCCTTGGTATTTTGTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
3UTR-3UTR GCA 90 bp GATACACAGAAAACTCAAGGACCCAGAGGGGAACCAAGTTATGTTATACCATTTCAGAAACGCATGTGCTaGTTTCCATCATCCCTTGCA +
Preference number: 2 (lower is better)
Translates to: DTQKTQGPRGEPSYVIPFQKRMC*FPSSLA
Trigger: TGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTG...AAATGGTATAACATAACTTGGTTCCCCTCTGGGTCCTTGAGTTTTCTGTGTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
3UTR-3UTR GCA 90 bp GCTGAAAGTCAGTGCCCAACTAGACAATCTGAGCTACTACATACACTTGGCTTAGAACTGTCAATACACTaGACCCTGTTTAAATGGCTG +
Preference number: 2 (lower is better)
Translates to: AESQCPTRQSELLHTLGLELSIH*TLFKWL
Trigger: CAGCCATTTAAACAGGGTGCAGTGTATTGACAGTTC...TAAGCCAAGTGTATGTAGTAGCTCAGATTGTCTAGTTGGGCACTGACTTTCAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469059.2
3UTR-3UTR CCA 90 bp TTAAGGATAATGTATGCCATTGGACTGGGCATTCAGACTTCGGTACTGACAAAGTGGGCAAGTTGGGGATaGAAAGATTCAAGAGACTTC +
Preference number: 2 (lower is better)
Translates to: LRIMYAIGLGIQTSVLTKWASWG*KDSRDF
Trigger: GAAGTCTCTTGAATCTTTCCATCCCCAACTTGCCCA...CTTTGTCAGTACCGAAGTCTGAATGCCCAGTCCAATGGCATACATTATCCTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
3UTR CAA 90 bp ATGAAGGTACAGTTAATCGAATGTTGTTCCCAATCAGAACCTGAGTaGTTGCAGAATTGGCAGCAGTTACTTGATGACTCAGTGCACTGT +
Preference number: 2 (lower is better)
Translates to: MKVQLIECCSQSEPE*LQNWQQLLDDSVHC
Trigger: ACAGTGCACTGAGTCATCAAGTAACTGCTGCCAATTCTGCAACAACTCAGGTTCTGATTGGGAACAACATTCGATTAACTGTACCTTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667706.1
3UTR-3UTR TCA 90 bp AAGGAAATGGGACTACTGGGCTGTTCGCAGAGCAGCAACATAATATTAGTGCTTAGAAAAATTGAAGCATaGGAGATGAGCATTGCTGTC +
Preference number: 2 (lower is better)
Translates to: KEMGLLGCSQSSNIILVLRKIEA*EMSIAV
Trigger: GACAGCAATGCTCATCTCTCATGCTTCAATTTTTCT...AAGCACTAATATTATGTTGCTGCTCTGCGAACAGCCCAGTAGTCCCATTTCCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
3UTR-3UTR TCA 90 bp TCAAGGACCCAGAGGGGAACCAAGTTATGTTATACCATTTACAAAATACCAAGGTTCCCAATCAGAACCTaGGTTGTTGCAGAATTGGCA +
Preference number: 2 (lower is better)
Translates to: SRTQRGTKLCYTIYKIPRFPIRT*VVAELA
Trigger: TGCCAATTCTGCAACAACTCAGGTTCTGATTGGGAA...CCTTGGTATTTTGTAAATGGTATAACATAACTTGGTTCCCCTCTGGGTCCTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000667706.1
3UTR-3UTR TCA 90 bp TTAAGGATAATGTATGCCATTGGACTGGGCATTCAGACTTCGGTACTGACAAAGAGAAAAATTGAAGCATaGGAGATGAGCATTGCTGTC +
Preference number: 2 (lower is better)
Translates to: LRIMYAIGLGIQTSVLTKRKIEA*EMSIAV
Trigger: GACAGCAATGCTCATCTCTCATGCTTCAATTTTTCT...CTTTGTCAGTACCGAAGTCTGAATGCCCAGTCCAATGGCATACATTATCCTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
3UTR-3UTR TCA 90 bp AATGATGATACACGTACAGCAATTACTGCATTCTTCTCCCTTATATCCTTTTCGTCCGCACCATGCACATaGTGTGATGACACTTCATCT +
Preference number: 2 (lower is better)
Translates to: NDDTRTAITAFFSLISFSSAPCT*CDDTSS
Trigger: AGATGAAGTGTCATCACATCATGTGCATGGTGCGGA...CGAAAAGGATATAAGGGAGAAGAATGCAGTAATTGCTGTACGTGTATCATCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
3UTR-3UTR GCA 90 bp GATACACAGAAAACTCAAGGACCCAGAGGGGAACCAAGTTATGTTATACCATTTCTGTTGCTGAATTTGTaGAAGCTGCTGTTTCTGCAT +
Preference number: 2 (lower is better)
Translates to: DTQKTQGPRGEPSYVIPFLLLNL*KLLFLH
Trigger: ATGCAGAAACAGCAGCTTGCACAAATTCAGCAACAG...AAATGGTATAACATAACTTGGTTCCCCTCTGGGTCCTTGAGTTTTCTGTGTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000667706.1
3UTR-3UTR TCA 90 bp TATACCATTTACAAAATACCAAGGAGTCCACAGCTACCTAACACATTTACTACATTGAAGCATGAGAGATaGGCATTGCTGTCAAGTCCC +
Preference number: 2 (lower is better)
Translates to: YTIYKIPRSPQLPNTFTTLKHER*ALLSSP
Trigger: GGGACTTGACAGCAATGCTCATCTCTCATGCTTCAA...TGTAGTAAATGTGTTAGGTAGCTGTGGACTCCTTGGTATTTTGTAAATGGTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
3UTR-3UTR TCA 90 bp TCAAGGACCCAGAGGGGAACCAAGTTATGTTATACCATTTACAAAATACCAAGGGTACAGAATGATGTCTaGGGAAAGACACTGTGTTAT +
Preference number: 2 (lower is better)
Translates to: SRTQRGTKLCYTIYKIPRVQNDV*GKTLCY
Trigger: ATAACACAGTGTCTTTCCTCAGACATCATTCTGTAC...CCTTGGTATTTTGTAAATGGTATAACATAACTTGGTTCCCCTCTGGGTCCTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000667706.1
3UTR-3UTR TCA 90 bp AACTCAAGGACCCAGAGGGGAACCAAGTTATGTTATACCATTTACAAAATACCAAGAAACAAAACCCTGTaGTGTGTTGGTGGAGGAATT +
Preference number: 2 (lower is better)
Translates to: NSRTQRGTKLCYTIYKIPRNKTL*CVGGGI
Trigger: AATTCCTCCACCAACACATCACAGGGTTTTGTTTCT...TGGTATTTTGTAAATGGTATAACATAACTTGGTTCCCCTCTGGGTCCTTGAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000667706.1
3UTR-3UTR TCA 90 bp TGTTATACCATTTACAAAATACCAAGGAGTCCACAGCTACCTAACACATTTACTTCCCATCAGTTGTTCTaGTGTCACCAAAGCAGAAGC +
Preference number: 2 (lower is better)
Translates to: CYTIYKIPRSPQLPNTFTSHQLF*CHQSRS
Trigger: GCTTCTGCTTTGGTGACATCAGAACAACTGATGGGA...AGTAAATGTGTTAGGTAGCTGTGGACTCCTTGGTATTTTGTAAATGGTATAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000667706.1
3UTR-3UTR GCA 90 bp TTAAGGATAATGTATGCCATTGGACTGGGCATTCAGACTTCGGTACTGACAAAGACGTACAGCAATTACTaGATTCTTCTCCCTTATATC +
Preference number: 2 (lower is better)
Translates to: LRIMYAIGLGIQTSVLTKTYSNY*ILLPYI
Trigger: GATATAAGGGAGAAGAATGCAGTAATTGCTGTACGT...CTTTGTCAGTACCGAAGTCTGAATGCCCAGTCCAATGGCATACATTATCCTTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
3UTR-3UTR CCA 90 bp AACTCAAGGACCCAGAGGGGAACCAAGTTATGTTATACCATTTACAAAATACCAATGAAGATGGGACCTTaGAAACTTGACAGTTTGCTG +
Preference number: 2 (lower is better)
Translates to: NSRTQRGTKLCYTIYKIPMKMGP*KLDSLL
Trigger: CAGCAAACTGTCAAGTTTCCAAGGTCCCATCTTCAT...TGGTATTTTGTAAATGGTATAACATAACTTGGTTCCCCTCTGGGTCCTTGAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000667706.1
3UTR-3UTR TCA 90 bp TGGCTGTTTTTAGAAACTGGAATGATGATACACGTACAGCAATTACTGCATTCTCATTCAAAATGCTACTaGTGCATAGCACCTAATCAA +
Preference number: 2 (lower is better)
Translates to: WLFLETGMMIHVQQLLHSHSKCY*CIAPNQ
Trigger: TTGATTAGGTGCTATGCATCAGTAGCATTTTGAATG...AGAATGCAGTAATTGCTGTACGTGTATCATCATTCCAGTTTCTAAAAACAGCCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
3UTR-3UTR GCA 90 bp CAATCTGAGCTACTACATACACTTGGCTTATCTGTAAAGTTAGATTTAAGACACCTGAAAACCAAGGTATaGAATTCCTTAGGATTAGAA +
Preference number: 2 (lower is better)
Translates to: QSELLHTLGLSVKLDLRHLKTKV*NSLGLE
Trigger: TTCTAATCCTAAGGAATTGCATACCTTGGTTTTCAG...GTGTCTTAAATCTAACTTTACAGATAAGCCAAGTGTATGTAGTAGCTCAGATTG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469059.2
3UTR-3UTR CAA 90 bp AAGATGGGACCTTGGAAACTTGACAGTTTGCTGCAGCGGCCAGCTTTAAGGCAGCTGCCGTTGATGGACTaGTATGTACAAGTGCTGTTG +
Preference number: 3 (lower is better)
Translates to: KMGPWKLDSLLQRPALRQLPLMD*YVQVLL
Trigger: CAACAGCACTTGTACATACAAGTCCATCAACGGCAG...CTGCCTTAAAGCTGGCCGCTGCAGCAAACTGTCAAGTTTCCAAGGTCCCATCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667706.1
3UTR GCA 72 bp GTCAAGTCCCCACAGCTGCCACAGAAACGCATGTGCTaGTTTCCATCATCCCTTGCATTCAAAATGCTACTG +
Preference number: 3 (lower is better)
Translates to: VKSPQLPQKRMC*FPSSLAFKMLL
Trigger: CAGTAGCATTTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGGACTTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
3UTR TCA 72 bp GCAAGCTGCTGTTTCTGCATGAGTGCCAGTTGCTGTTaGTGTTGCTGGTATTGTTCGGCTGTAAATGCTGGA +
Preference number: 3 (lower is better)
Translates to: ASCCFCMSASCC*CCWYCSAVNAG
Trigger: TCCAGCATTTACAGCCGAACAATACCAGCAACATCAACAGCAACTGGCACTCATGCAGAAACAGCAGCTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667706.1
3UTR TCA 72 bp GAATCTACAGAGGATGAAGATGGGACCTTGGAAACTTaGCAGTTTGCTGCAGCGGCCAGCTTTAAGGCAGAT +
Preference number: 3 (lower is better)
Translates to: ESTEDEDGTLET*QFAAAASFKAD
Trigger: ATCTGCCTTAAAGCTGGCCGCTGCAGCAAACTGTCAAGTTTCCAAGGTCCCATCTTCATCCTCTGTAGATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667706.1
3UTR-3UTR CAA 90 bp AACCTTAAGGATAATGTATGCCATTGGACTGGGCATTCAGACTTCGGTACTGACTTTGTGGTTCTGGCCTaGCAGCCTTCTGGAGAATCT +
Preference number: 3 (lower is better)
Translates to: NLKDNVCHWTGHSDFGTDFVVLA*QPSGES
Trigger: AGATTCTCCAGAAGGCTGCAAGGCCAGAACCACAAA...GTCAGTACCGAAGTCTGAATGCCCAGTCCAATGGCATACATTATCCTTAAGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
3UTR-3UTR CAA 90 bp ATGAGCATTGCTGTCAAGTCCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTACATCATCCTTCATCTaGAATCCCATCAGTTGTTCT +
Preference number: 3 (lower is better)
Translates to: MSIAVKSPQLPQKRMCCFTSSFI*NPISCS
Trigger: AGAACAACTGATGGGATTCAAGATGAAGGATGATGT...AAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGGACTTGACAGCAATGCTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000667706.1
3UTR CCA 72 bp TTGGAACTGAATCTACAGAGGATGAAGATGGGACCTTaGAAACTTGACAGTTTGCTGCAGCGGCCAGCTTTA +
Preference number: 3 (lower is better)
Translates to: LELNLQRMKMGP*KLDSLLQRPAL
Trigger: TAAAGCTGGCCGCTGCAGCAAACTGTCAAGTTTCCAAGGTCCCATCTTCATCCTCTGTAGATTCAGTTCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667706.1
3UTR TCA 72 bp GCTGTTGCTGAATTTGTGCAAGCTGCTGTTTCTGCATaGGTGCCAGTTGCTGTTGATGTTGCTGGTATTGTT +
Preference number: 3 (lower is better)
Translates to: AVAEFVQAAVSA*VPVAVDVAGIV
Trigger: AACAATACCAGCAACATCAACAGCAACTGGCACTCATGCAGAAACAGCAGCTTGCACAAATTCAGCAACAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667706.1
3UTR TCA 72 bp GTGTTGGTGGAGGAATTACTATTTGCTTGCTGTTGCTaGATTTGTGCAAGCTGCTGTTTCTGCATGAGTGCC +
Preference number: 3 (lower is better)
Translates to: VLVEELLFACCC*ICASCCFCMSA
Trigger: GGCACTCATGCAGAAACAGCAGCTTGCACAAATTCAGCAACAGCAAGCAAATAGTAATTCCTCCACCAACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667706.1
3UTR CCA 72 bp AAGTACCAGAAACCACCCACAGCTTTGTGGGCAAGTTaGGGATGGAAAGATTCAAGAGACTTCATTTTTAGC +
Preference number: 3 (lower is better)
Translates to: KYQKPPTALWAS*GWKDSRDFIFS
Trigger: GCTAAAAATGAAGTCTCTTGAATCTTTCCATCCCCAACTTGCCCACAAAGCTGTGGGTGGTTTCTGGTACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
3UTR CCA 72 bp GGTCAAATATTTCCAAAGGAAGGCACCCGATATTTGTaGTTCTGGCCTTGCAGCCTTCTGGAGAATCTTAAA +
Preference number: 3 (lower is better)
Translates to: GQIFPKEGTRYL*FWPCSLLENLK
Trigger: TTTAAGATTCTCCAGAAGGCTGCAAGGCCAGAACCACAAATATCGGGTGCCTTCCTTTGGAAATATTTGACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
3UTR-3UTR CAA 90 bp TTCACAGAAGAGAGGTCAAATATTTCCAAAGGAAGGCACCCGATATTTGTGGTTAGCTTTGTGGGCAAGTaGGGGATGGAAAGATTCAAG +
Preference number: 3 (lower is better)
Translates to: FTEERSNISKGRHPIFVVSFVGK*GMERFK
Trigger: CTTGAATCTTTCCATCCCCAACTTGCCCACAAAGCT...AACCACAAATATCGGGTGCCTTCCTTTGGAAATATTTGACCTCTCTTCTGTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
3UTR-3UTR CAA 90 bp TGTTATACCATTTACAAAATACCAAGGAGTCCACAGCTACCTAACACATTTACTAAACCACCCACAGCTTaGTGGGCAAGTTGGGGATGG +
Preference number: 3 (lower is better)
Translates to: CYTIYKIPRSPQLPNTFTKPPTA*WASWGW
Trigger: CCATCCCCAACTTGCCCACAAAGCTGTGGGTGGTTT...AGTAAATGTGTTAGGTAGCTGTGGACTCCTTGGTATTTTGTAAATGGTATAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
3UTR TCA 72 bp TGTATGCCATTGGACTGGGCATTCAGACTTCGGTACTaGCAAAGCACTAGTAGTAGTCTGTTAAGTACCATT +
Preference number: 3 (lower is better)
Translates to: CMPLDWAFRLRY*QSTSSSLLSTI
Trigger: AATGGTACTTAACAGACTACTACTAGTGCTTTGTCAGTACCGAAGTCTGAATGCCCAGTCCAATGGCATACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
3UTR GCA 72 bp TTTCCAGGTGGGATTAAAAACCTTAAGGATAATGTATaGCATTGGACTGGGCATTCAGACTTCGGTACTGAC +
Preference number: 3 (lower is better)
Translates to: FPGGIKNLKDNV*HWTGHSDFGTD
Trigger: GTCAGTACCGAAGTCTGAATGCCCAGTCCAATGGCATACATTATCCTTAAGGTTTTTAATCCCACCTGGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
3UTR-3UTR CAA 90 bp TTAAGGATAATGTATGCCATTGGACTGGGCATTCAGACTTCGGTACTGACAAAGCACATCTCACACTCTTaGTTGCAATTGATTTCCCTC +
Preference number: 3 (lower is better)
Translates to: LRIMYAIGLGIQTSVLTKHISHS*LQLISL
Trigger: GAGGGAAATCAATTGCAACAAAGAGTGTGAGATGTG...CTTTGTCAGTACCGAAGTCTGAATGCCCAGTCCAATGGCATACATTATCCTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
3UTR-3UTR CAA 90 bp CATGCACATGATGTGATGACACTTCATCTCTATACAATCTCACATCTCACACTCGTGTTGTCTGCTATGTaGTTCAGTGCTGGCTTTTCT +
Preference number: 3 (lower is better)
Translates to: HAHDVMTLHLYTISHLTLVLSAM*FSAGFS
Trigger: AGAAAAGCCAGCACTGAACAACATAGCAGACAACAC...GAGTGTGAGATGTGAGATTGTATAGAGATGAAGTGTCATCACATCATGTGCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000667706.1
3UTR-3UTR CAA 90 bp TCAAGGACCCAGAGGGGAACCAAGTTATGTTATACCATTTACAAAATACCAAGGCACATCTCACACTCTTaGTTGCAATTGATTTCCCTC +
Preference number: 3 (lower is better)
Translates to: SRTQRGTKLCYTIYKIPRHISHS*LQLISL
Trigger: GAGGGAAATCAATTGCAACAAAGAGTGTGAGATGTG...CCTTGGTATTTTGTAAATGGTATAACATAACTTGGTTCCCCTCTGGGTCCTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
3UTR-3UTR CAA 90 bp AACTCAAGGACCCAGAGGGGAACCAAGTTATGTTATACCATTTACAAAATACCAAAGCTGAACCTGCCGTaGATGGACTTGTATGTACAA +
Preference number: 3 (lower is better)
Translates to: NSRTQRGTKLCYTIYKIPKLNLP*MDLYVQ
Trigger: TTGTACATACAAGTCCATCAACGGCAGGTTCAGCTT...TGGTATTTTGTAAATGGTATAACATAACTTGGTTCCCCTCTGGGTCCTTGAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000667706.1
3UTR-3UTR CAA 90 bp AACTCAAGGACCCAGAGGGGAACCAAGTTATGTTATACCATTTACAAAATACCACACATCTCACACTCTTaGTTGCAATTGATTTCCCTC +
Preference number: 3 (lower is better)
Translates to: NSRTQRGTKLCYTIYKIPHISHS*LQLISL
Trigger: GAGGGAAATCAATTGCAACAAAGAGTGTGAGATGTG...TGGTATTTTGTAAATGGTATAACATAACTTGGTTCCCCTCTGGGTCCTTGAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
3UTR-3UTR CAA 90 bp AACTCAAGGACCCAGAGGGGAACCAAGTTATGTTATACCATTTACAAAATACCAACTATTTGCTTGCTGTaGCTGAATTTGTGCAAGCTG +
Preference number: 3 (lower is better)
Translates to: NSRTQRGTKLCYTIYKIPTICLL*LNLCKL
Trigger: CAGCTTGCACAAATTCAGCAACAGCAAGCAAATAGT...TGGTATTTTGTAAATGGTATAACATAACTTGGTTCCCCTCTGGGTCCTTGAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000667706.1
3UTR-3UTR CAA 90 bp TACACAGAAAACTCAAGGACCCAGAGGGGAACCAAGTTATGTTATACCATTTACGGAATTACTATTTGCTaGCTGTTGCTGAATTTGTGC +
Preference number: 3 (lower is better)
Translates to: YTENSRTQRGTKLCYTIYGITIC*LLLNLC
Trigger: GCACAAATTCAGCAACAGCAAGCAAATAGTAATTCC...GTAAATGGTATAACATAACTTGGTTCCCCTCTGGGTCCTTGAGTTTTCTGTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000667706.1
3UTR-3UTR CAA 90 bp AATGATGATACACGTACAGCAATTACTGCATTCTTCTCCCTTATATCCTTTTCGATCTCACACTCTTTGTaGCAATTGATTTCCCTCCCA +
Preference number: 3 (lower is better)
Translates to: NDDTRTAITAFFSLISFSISHSL*QLISLP
Trigger: TGGGAGGGAAATCAATTGCAACAAAGAGTGTGAGAT...CGAAAAGGATATAAGGGAGAAGAATGCAGTAATTGCTGTACGTGTATCATCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
3UTR GCA 72 bp CAAGACAACATAAACTCCAGTTGTAAGGACTCCATTTaGATACTTGATTTAACACTTTTTGGTGTGGAAGGA +
Preference number: 3 (lower is better)
Translates to: QDNINSSCKDSI*ILDLTLFGVEG
Trigger: TCCTTCCACACCAAAAAGTGTTAAATCAAGTATGCAAATGGAGTCCTTACAACTGGAGTTTATGTTGTCTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
3UTR TCA 72 bp AGAACGGAGTTGTTTATGTTGATTTACTGTACAGAATaGTGTCTGAGGAAAGACACTGTGTTATGCTACTTA +
Preference number: 3 (lower is better)
Translates to: RTELFMLIYCTE*CLRKDTVLCYL
Trigger: TAAGTAGCATAACACAGTGTCTTTCCTCAGACATCATTCTGTACAGTAAATCAACATAAACAACTCCGTTCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667706.1
CDS-3UTR TCA 90 bp ATTGCTGTCAAGTCCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCACCGCTGCCGGGGACTTaGGGGGCGGAGCGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: IAVKSPQLPQKRMCCFPSPLPGT*GAERRA
Trigger: GGCTCTGCGCTCCGCCCCTCAAGTCCCCGGCAGCGG...TGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGGACTTGACAGCAAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000667706.1
CDS-3UTR GCA 90 bp GCTGTCAAGTCCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCCACTCGCCAACCGCTaGCGGGGACTTGAGGGGCGG +
Preference number: 4 (lower is better)
Translates to: AVKSPQLPQKRMCCFPSSPLANR*RGLEGR
Trigger: CCGCCCCTCAAGTCCCCGGCAGCGGTTGGCGAGTGG...GGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGGACTTGACAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000667706.1
CDS-3UTR CCA 90 bp AGTCCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATCACCAGCCGGGAGGGTaGGAGGCTGTGCCGCTCCGC +
Preference number: 4 (lower is better)
Translates to: SPHSCHRNACAAFHHPLHHQPGG*EAVPLR
Trigger: GCGGAGCGGCACAGCCTCCCACCCTCCCGGCTGGTG...ATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000667706.1
CDS-3UTR TCA 90 bp CCACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAACCGCTGCCGGGGACTTaGGGGGCGGAGCGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: PQLPQKRMCCFPSSLAFKPLPGT*GAERRA
Trigger: GGCTCTGCGCTCCGCCCCTCAAGTCCCCGGCAGCGG...TTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000667706.1
CDS-3UTR CCA 90 bp TCCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCCGGCCAGCGGGATCATaGAGAACCGGGGGTTCGGTC +
Preference number: 4 (lower is better)
Translates to: SPQLPQKRMCCFPSSLAFRPAGS*RTGGSV
Trigger: GACCGAACCCCCGGTTCTCCATGATCCCGCTGGCCG...GAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000667706.1
CDS-3UTR CCA 90 bp TGCTGTCAAGTCCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTCTCCATTCCGGTaGGCATCTGCGGCACGGCCC +
Preference number: 4 (lower is better)
Translates to: CCQVPTAATETHVLLSIIPSPFR*ASAARP
Trigger: GGGCCGTGCCGCAGATGCCCACCGGAATGGAGAAGG...GATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGGACTTGACAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000667706.1
CDS-3UTR TCA 90 bp GCTGTCAAGTCCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCTGGCTTCCTGCAGACTaGCTGGCTGCTGACCACTGC +
Preference number: 4 (lower is better)
Translates to: AVKSPQLPQKRMCCFPSSWLPAD*LAADHC
Trigger: GCAGTGGTCAGCAGCCAGTCAGTCTGCAGGAAGCCA...GGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGGACTTGACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR CCA 90 bp CCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAAATGCTACTGCACCAGCCGGGAGGGTaGGAGGCTGTGCCGCTCCGC +
Preference number: 4 (lower is better)
Translates to: PQKRMCCFPSSLAFKMLLHQPGG*EAVPLR
Trigger: GCGGAGCGGCACAGCCTCCCACCCTCCCGGCTGGTG...CAGTAGCATTTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000667706.1
CDS-3UTR CCA 90 bp GCTGTCAAGTCCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCGCAGGACTCGTCTGTTaGGGAGTAGCAGCGGCAGAC +
Preference number: 4 (lower is better)
Translates to: AVKSPQLPQKRMCCFPSSAGLVC*GVAAAD
Trigger: GTCTGCCGCTGCTACTCCCCAACAGACGAGTCCTGC...GGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGGACTTGACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR TCA 90 bp AAAGTCAGTGCCCAACTAGACAATCTGAGCTACTACATACACTTGGCTTATCTGCCGCTGCCGGGGACTTaGGGGGCGGAGCGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: KVSAQLDNLSYYIHLAYLPLPGT*GAERRA
Trigger: GGCTCTGCGCTCCGCCCCTCAAGTCCCCGGCAGCGG...CAGATAAGCCAAGTGTATGTAGTAGCTCAGATTGTCTAGTTGGGCACTGACTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000469059.2
ENST00000480402.1
CDS-3UTR TCA 90 bp CAATGTGCTGAAAGTCAGTGCCCAACTAGACAATCTGAGCTACTACATACACTTCCGCTGCCGGGGACTTaGGGGGCGGAGCGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: QCAESQCPTRQSELLHTLPLPGT*GAERRA
Trigger: GGCTCTGCGCTCCGCCCCTCAAGTCCCCGGCAGCGG...AAGTGTATGTAGTAGCTCAGATTGTCTAGTTGGGCACTGACTTTCAGCACATTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000469059.2
ENST00000480402.1
CDS-3UTR TCA 90 bp CTGTCAAGTCCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCGGGACCTTGGAAACTTaGCAGTTTGCTGCAGCGGCC +
Preference number: 4 (lower is better)
Translates to: LSSPHSCHRNACAAFHHPGTLET*QFAAAA
Trigger: GGCCGCTGCAGCAAACTGTCAAGTTTCCAAGGTCCC...GGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGGACTTGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR GCA 90 bp TGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAAATGCTACCCACTCGCCAACCGCTaGCGGGGACTTGAGGGGCGG +
Preference number: 4 (lower is better)
Translates to: CHRNACAAFHHPLHSKCYPLANR*RGLEGR
Trigger: CCGCCCCTCAAGTCCCCGGCAGCGGTTGGCGAGTGG...GTAGCATTTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000667706.1
CDS-3UTR CCA 90 bp CAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAAATGCTACTGATGCACCAGCCGGGAGGGTaGGAGGCTGTGCCGCTCCGC +
Preference number: 4 (lower is better)
Translates to: QKRMCCFPSSLAFKMLLMHQPGG*EAVPLR
Trigger: GCGGAGCGGCACAGCCTCCCACCCTCCCGGCTGGTG...CATCAGTAGCATTTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000667706.1
CDS-3UTR CCA 90 bp GCTGAAAGTCAGTGCCCAACTAGACAATCTGAGCTACTACATACACTTGGCTTACACCAGCCGGGAGGGTaGGAGGCTGTGCCGCTCCGC +
Preference number: 4 (lower is better)
Translates to: AESQCPTRQSELLHTLGLHQPGG*EAVPLR
Trigger: GCGGAGCGGCACAGCCTCCCACCCTCCCGGCTGGTG...TAAGCCAAGTGTATGTAGTAGCTCAGATTGTCTAGTTGGGCACTGACTTTCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000469059.2
ENST00000480402.1
CDS-3UTR CCA 90 bp TGCTGTCAAGTCCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCGCAGGACTCGTCTGTTaGGGAGTAGCAGCGGCAGAC +
Preference number: 4 (lower is better)
Translates to: CCQVPTAATETHVLLSIIAGLVC*GVAAAD
Trigger: GTCTGCCGCTGCTACTCCCCAACAGACGAGTCCTGC...GATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGGACTTGACAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR TCA 90 bp TTTACAAAATACCAAGGAGTCCACAGCTACCTAACACATTTACTACAGCACAGGCCGCTGCCGGGGACTTaGGGGGCGGAGCGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: FTKYQGVHSYLTHLLQHRPLPGT*GAERRA
Trigger: GGCTCTGCGCTCCGCCCCTCAAGTCCCCGGCAGCGG...CCTGTGCTGTAGTAAATGTGTTAGGTAGCTGTGGACTCCTTGGTATTTTGTAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000667706.1
CDS-3UTR TCA 90 bp CCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAGGGACCTTGGAAACTTaGCAGTTTGCTGCAGCGGCC +
Preference number: 4 (lower is better)
Translates to: PHSCHRNACAAFHHPLHSGTLET*QFAAAA
Trigger: GGCCGCTGCAGCAAACTGTCAAGTTTCCAAGGTCCC...TGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR GCA 90 bp AACCTTAAGGATAATGTATGCCATTGGACTGGGCATTCAGACTTCGGTACTGACCCACTCGCCAACCGCTaGCGGGGACTTGAGGGGCGG +
Preference number: 4 (lower is better)
Translates to: NLKDNVCHWTGHSDFGTDPLANR*RGLEGR
Trigger: CCGCCCCTCAAGTCCCCGGCAGCGGTTGGCGAGTGG...GTCAGTACCGAAGTCTGAATGCCCAGTCCAATGGCATACATTATCCTTAAGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319778.11
CDS-3UTR CCA 90 bp CAATGTGCTGAAAGTCAGTGCCCAACTAGACAATCTGAGCTACTACATACACTTCACCAGCCGGGAGGGTaGGAGGCTGTGCCGCTCCGC +
Preference number: 4 (lower is better)
Translates to: QCAESQCPTRQSELLHTLHQPGG*EAVPLR
Trigger: GCGGAGCGGCACAGCCTCCCACCCTCCCGGCTGGTG...AAGTGTATGTAGTAGCTCAGATTGTCTAGTTGGGCACTGACTTTCAGCACATTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000469059.2
ENST00000480402.1
CDS-3UTR CCA 90 bp CACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAAACGGCCAGCGGGATCATaGAGAACCGGGGGTTCGGTC +
Preference number: 4 (lower is better)
Translates to: HSCHRNACAAFHHPLHSKRPAGS*RTGGSV
Trigger: GACCGAACCCCCGGTTCTCCATGATCCCGCTGGCCG...TTTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000667706.1
CDS-3UTR TCA 90 bp GCTGTCAAGTCCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCAGACTGACTGGCTGCTaGCCACTGCCTTTTTCTAGG +
Preference number: 4 (lower is better)
Translates to: AVKSPQLPQKRMCCFPSSRLTGC*PLPFSR
Trigger: CCTAGAAAAAGGCAGTGGTCAGCAGCCAGTCAGTCT...GGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGGACTTGACAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR TCA 90 bp AGTGCTTTAAGTACCAGAAACCACCCACAGCTTTGTGGGCAAGTTGGGGATGGATGGCTTCCTGCAGACTaGCTGGCTGCTGACCACTGC +
Preference number: 4 (lower is better)
Translates to: SALSTRNHPQLCGQVGDGWLPAD*LAADHC
Trigger: GCAGTGGTCAGCAGCCAGTCAGTCTGCAGGAAGCCA...TCCATCCCCAACTTGCCCACAAAGCTGTGGGTGGTTTCTGGTACTTAAAGCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
CDS-3UTR GCA 90 bp TGCTGTCAAGTCCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCATCGAGGCGTATTCGTaGAGGTCGGGCAGATCCTCA +
Preference number: 4 (lower is better)
Translates to: CCQVPTAATETHVLLSIIIEAYS*RSGRSS
Trigger: TGAGGATCTGCCCGACCTGCACGAATACGCCTCGAT...GATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGGACTTGACAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000667706.1
CDS-3UTR GCA 90 bp TCCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCATCAAGTCCCCAGGCTaGAGTTCCACTCGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: SPQLPQKRMCCFPSSLAFIKSPG*SSTRRK
Trigger: CTTCCTCCGAGTGGAACTGCAGCCTGGGGACTTGAT...GAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR CCA 90 bp CTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAAATGCTAGATACCTCTCCGCTCTaGGGAAACGGCCCCGGCCAG +
Preference number: 4 (lower is better)
Translates to: LPQKRMCCFPSSLAFKMLDTSPL*GNGPGQ
Trigger: CTGGCCGGGGCCGTTTCCCCAGAGCGGAGAGGTATC...TAGCATTTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000667706.1
CDS-3UTR CCA 90 bp CCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAAATGCTACTGGATACCTCTCCGCTCTaGGGAAACGGCCCCGGCCAG +
Preference number: 4 (lower is better)
Translates to: PQKRMCCFPSSLAFKMLLDTSPL*GNGPGQ
Trigger: CTGGCCGGGGCCGTTTCCCCAGAGCGGAGAGGTATC...CAGTAGCATTTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000667706.1
CDS-3UTR CCA 90 bp CTGTCAAGTCCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTCCTGCAGACTGACTaGCTGCTGACCACTGCCTTT +
Preference number: 4 (lower is better)
Translates to: LSSPHSCHRNACAAFHHPFLQTD*LLTTAF
Trigger: AAAGGCAGTGGTCAGCAGCCAGTCAGTCTGCAGGAA...GGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGGACTTGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR CCA 90 bp CTGTCAAGTCCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCGAGGTACTGCATGTCTaGGTCCCAGGTTGTGCTGTT +
Preference number: 4 (lower is better)
Translates to: LSSPHSCHRNACAAFHHPEVLHV*VPGCAV
Trigger: AACAGCACAACCTGGGACCCAGACATGCAGTACCTC...GGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGGACTTGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR TCA 90 bp CTGTCAAGTCCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCATACACCTGCTGTGCTaGAATAGCCCGCTGAAGATG +
Preference number: 4 (lower is better)
Translates to: LSSPHSCHRNACAAFHHPIHLLC*NSPLKM
Trigger: CATCTTCAGCGGGCTATTTCAGCACAGCAGGTGTAT...GGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGGACTTGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR TCA 90 bp TCCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAGACTGACTGGCTGCTaGCCACTGCCTTTTTCTAGG +
Preference number: 4 (lower is better)
Translates to: SPQLPQKRMCCFPSSLAFRLTGC*PLPFSR
Trigger: CCTAGAAAAAGGCAGTGGTCAGCAGCCAGTCAGTCT...GAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR TCA 90 bp TTGCTGTCAAGTCCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATGCCCTTGTATACTCCTaGGGCTGGAAGGACGCCATT +
Preference number: 4 (lower is better)
Translates to: LLSSPHSCHRNACAAFHHALVYS*GWKDAI
Trigger: AATGGCGTCCTTCCAGCCTCAGGAGTATACAAGGGC...ATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGGACTTGACAGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR GCA 90 bp ACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAAATGCTACTGATGAGGGTGGGAGGCTGTaGCGCTCCGCTCCTCTCTCG +
Preference number: 4 (lower is better)
Translates to: TETHVLLSIIPCIQNATDEGGRL*RSAPLS
Trigger: CGAGAGAGGAGCGGAGCGGCACAGCCTCCCACCCTC...ATCAGTAGCATTTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000667706.1
CDS-3UTR GCA 90 bp TTAAGGATAATGTATGCCATTGGACTGGGCATTCAGACTTCGGTACTGACAAAGGAGGGTGGGAGGCTGTaGCGCTCCGCTCCTCTCTCG +
Preference number: 4 (lower is better)
Translates to: LRIMYAIGLGIQTSVLTKEGGRL*RSAPLS
Trigger: CGAGAGAGGAGCGGAGCGGCACAGCCTCCCACCCTC...CTTTGTCAGTACCGAAGTCTGAATGCCCAGTCCAATGGCATACATTATCCTTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319778.11
CDS-3UTR GCA 90 bp AGTCCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATCTGGCTGCTGACCACTaGCTTTTTCTAGGCGGTCAA +
Preference number: 4 (lower is better)
Translates to: SPHSCHRNACAAFHHPLHLAADH*LFLGGQ
Trigger: TTGACCGCCTAGAAAAAGGCAGTGGTCAGCAGCCAG...ATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR GCA 90 bp GCTGTCAAGTCCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCATTGAAGACTGGCAGTaGAGCAGGACTCGTCTGTTG +
Preference number: 4 (lower is better)
Translates to: AVKSPQLPQKRMCCFPSSIEDWQ*SRTRLL
Trigger: CAACAGACGAGTCCTGCTGCACTGCCAGTCTTCAAT...GGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGGACTTGACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR GCA 90 bp TCCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCTCAAGTCCCCACAGCTaGCACAGAAACGCATGTGCT +
Preference number: 4 (lower is better)
Translates to: SPQLPQKRMCCFPSSLAFSSPHS*HRNACA
Trigger: AGCACATGCGTTTCTGTGGCAGCTGTGGGGACTTGA...GAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR GCA 90 bp AAAGTCAGTGCCCAACTAGACAATCTGAGCTACTACATACACTTGGCTTATCTGAGCCATTCCCCACACTaGATCGCGCAGCGGCGCGGG +
Preference number: 4 (lower is better)
Translates to: KVSAQLDNLSYYIHLAYLSHSPH*IAQRRG
Trigger: CCCGCGCCGCTGCGCGATGCAGTGTGGGGAATGGCT...CAGATAAGCCAAGTGTATGTAGTAGCTCAGATTGTCTAGTTGGGCACTGACTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480402.1
CDS-3UTR CCA 90 bp GTCCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCCACCCACAGCTTTGTaGGCAAGTTGGGGATGGAAA +
Preference number: 4 (lower is better)
Translates to: VPTAATETHVLLSIIPCIPPTAL*ASWGWK
Trigger: TTTCCATCCCCAACTTGCCCACAAAGCTGTGGGTGG...AATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
CDS-3UTR CCA 90 bp TCCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAGGAAATGGGACTACTaGGCTGTTCGCAGAGCAGCA +
Preference number: 4 (lower is better)
Translates to: SPQLPQKRMCCFPSSLAFRKWDY*AVRRAA
Trigger: TGCTGCTCTGCGAACAGCCCAGTAGTCCCATTTCCT...GAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
CDS-3UTR CCA 90 bp TCCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCGGCACCCGATATTTGTaGTTCTGGCCTTGCAGCCTT +
Preference number: 4 (lower is better)
Translates to: SPQLPQKRMCCFPSSLAFGTRYL*FWPCSL
Trigger: AAGGCTGCAAGGCCAGAACCACAAATATCGGGTGCC...GAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
CDS-3UTR TCA 90 bp TGCTGTCAAGTCCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCATACACCTGCTGTGCTaGAATAGCCCGCTGAAGATG +
Preference number: 4 (lower is better)
Translates to: CCQVPTAATETHVLLSIIIHLLC*NSPLKM
Trigger: CATCTTCAGCGGGCTATTTCAGCACAGCAGGTGTAT...GATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGGACTTGACAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR TCA 90 bp CTGTCAAGTCCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTCCCATCAGTTGTTCTaGTGTCACCAAAGCAGAAGC +
Preference number: 4 (lower is better)
Translates to: LSSPHSCHRNACAAFHHPSHQLF*CHQSRS
Trigger: GCTTCTGCTTTGGTGACATCAGAACAACTGATGGGA...GGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGGACTTGACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR TCA 90 bp AGTGCTTTAAGTACCAGAAACCACCCACAGCTTTGTGGGCAAGTTGGGGATGGAGCCCTTGTATACTCCTaGGGCTGGAAGGACGCCATT +
Preference number: 4 (lower is better)
Translates to: SALSTRNHPQLCGQVGDGALVYS*GWKDAI
Trigger: AATGGCGTCCTTCCAGCCTCAGGAGTATACAAGGGC...TCCATCCCCAACTTGCCCACAAAGCTGTGGGTGGTTTCTGGTACTTAAAGCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
CDS-3UTR TCA 90 bp CACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAAAGGGACCTTGGAAACTTaGCAGTTTGCTGCAGCGGCC +
Preference number: 4 (lower is better)
Translates to: HSCHRNACAAFHHPLHSKGTLET*QFAAAA
Trigger: GGCCGCTGCAGCAAACTGTCAAGTTTCCAAGGTCCC...TTTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR GCA 90 bp ATGAGCATTGCTGTCAAGTCCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTTTCTCGCCATACACCTaGTGTGCTGAAATAGCCCGC +
Preference number: 4 (lower is better)
Translates to: MSIAVKSPQLPQKRMCCFFSPYT*CAEIAR
Trigger: GCGGGCTATTTCAGCACAGCAGGTGTATGGCGAGAA...AAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGGACTTGACAGCAATGCTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR GCA 90 bp TTGCTGTCAAGTCCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCTGGCTGCTGACCACTaGCTTTTTCTAGGCGGTCAA +
Preference number: 4 (lower is better)
Translates to: LLSSPHSCHRNACAAFHHLAADH*LFLGGQ
Trigger: TTGACCGCCTAGAAAAAGGCAGTGGTCAGCAGCCAG...ATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGGACTTGACAGCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR GCA 90 bp GTCCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTATTGAAGACTGGCAGTaGAGCAGGACTCGTCTGTTG +
Preference number: 4 (lower is better)
Translates to: VPTAATETHVLLSIIPCIIEDWQ*SRTRLL
Trigger: CAACAGACGAGTCCTGCTGCACTGCCAGTCTTCAAT...AATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR GCA 90 bp CCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAATTGAAGACTGGCAGTaGAGCAGGACTCGTCTGTTG +
Preference number: 4 (lower is better)
Translates to: PHSCHRNACAAFHHPLHSIEDWQ*SRTRLL
Trigger: CAACAGACGAGTCCTGCTGCACTGCCAGTCTTCAAT...TGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR GCA 90 bp CCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCACTGGGTCCCAGGTTGTaGTGTTCCTGTTCGGTTTAT +
Preference number: 4 (lower is better)
Translates to: PHSCHRNACAAFHHPLHSLGPRL*CSCSVY
Trigger: ATAAACCGAACAGGAACAGCACAACCTGGGACCCAG...TGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR GCA 90 bp TTGCTGTCAAGTCCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATTCAAGTCCCCACAGCTaGCACAGAAACGCATGTGCT +
Preference number: 4 (lower is better)
Translates to: LLSSPHSCHRNACAAFHHSSPHS*HRNACA
Trigger: AGCACATGCGTTTCTGTGGCAGCTGTGGGGACTTGA...ATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGGACTTGACAGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR GCA 90 bp ATGAGAGATGAGCATTGCTGTCAAGTCCCCACAGCTGCCACAGAAACGCATGTGTCAAGTCCCCACAGCTaGCACAGAAACGCATGTGCT +
Preference number: 4 (lower is better)
Translates to: MRDEHCCQVPTAATETHVSSPHS*HRNACA
Trigger: AGCACATGCGTTTCTGTGGCAGCTGTGGGGACTTGA...CACATGCGTTTCTGTGGCAGCTGTGGGGACTTGACAGCAATGCTCATCTCTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR CCA 90 bp CAATGTGCTGAAAGTCAGTGCCCAACTAGACAATCTGAGCTACTACATACACTTCGGCCAGCGGGATCATaGAGAACCGGGGGTTCGGTC +
Preference number: 4 (lower is better)
Translates to: QCAESQCPTRQSELLHTLRPAGS*RTGGSV
Trigger: GACCGAACCCCCGGTTCTCCATGATCCCGCTGGCCG...AAGTGTATGTAGTAGCTCAGATTGTCTAGTTGGGCACTGACTTTCAGCACATTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000469059.2
ENST00000480402.1
CDS-3UTR CCA 90 bp CACTGCACCCTGTTTAAATGGCTGTACCTGAAAACCAAGGTATGCAATTCCTTAGATACCTCTCCGCTCTaGGGAAACGGCCCCGGCCAG +
Preference number: 4 (lower is better)
Translates to: HCTLFKWLYLKTKVCNSLDTSPL*GNGPGQ
Trigger: CTGGCCGGGGCCGTTTCCCCAGAGCGGAGAGGTATC...TAAGGAATTGCATACCTTGGTTTTCAGGTACAGCCATTTAAACAGGGTGCAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469059.2
CDS-3UTR CCA 90 bp AAAGTCAGTGCCCAACTAGACAATCTGAGCTACTACATACACTTGGCTTATCTGGATACCTCTCCGCTCTaGGGAAACGGCCCCGGCCAG +
Preference number: 4 (lower is better)
Translates to: KVSAQLDNLSYYIHLAYLDTSPL*GNGPGQ
Trigger: CTGGCCGGGGCCGTTTCCCCAGAGCGGAGAGGTATC...CAGATAAGCCAAGTGTATGTAGTAGCTCAGATTGTCTAGTTGGGCACTGACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000469059.2
ENST00000480402.1
CDS-3UTR CCA 90 bp ACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAAATGCTACTGATGATACCTCTCCGCTCTaGGGAAACGGCCCCGGCCAG +
Preference number: 4 (lower is better)
Translates to: TETHVLLSIIPCIQNATDDTSPL*GNGPGQ
Trigger: CTGGCCGGGGCCGTTTCCCCAGAGCGGAGAGGTATC...ATCAGTAGCATTTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000667706.1
CDS-3UTR CCA 90 bp AAAGTCAGTGCCCAACTAGACAATCTGAGCTACTACATACACTTGGCTTATCTGCCTTCTCCATTCCGGTaGGCATCTGCGGCACGGCCC +
Preference number: 4 (lower is better)
Translates to: KVSAQLDNLSYYIHLAYLPSPFR*ASAARP
Trigger: GGGCCGTGCCGCAGATGCCCACCGGAATGGAGAAGG...CAGATAAGCCAAGTGTATGTAGTAGCTCAGATTGTCTAGTTGGGCACTGACTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000469059.2
ENST00000480402.1
CDS-3UTR CCA 90 bp CAATGTGCTGAAAGTCAGTGCCCAACTAGACAATCTGAGCTACTACATACACTTCCTTCTCCATTCCGGTaGGCATCTGCGGCACGGCCC +
Preference number: 4 (lower is better)
Translates to: QCAESQCPTRQSELLHTLPSPFR*ASAARP
Trigger: GGGCCGTGCCGCAGATGCCCACCGGAATGGAGAAGG...AAGTGTATGTAGTAGCTCAGATTGTCTAGTTGGGCACTGACTTTCAGCACATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000469059.2
ENST00000480402.1
CDS-3UTR CCA 90 bp CTGTCAAGTCCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTTAGCATTGAAGACTaGCAGTGCAGCAGGACTCGT +
Preference number: 4 (lower is better)
Translates to: LSSPHSCHRNACAAFHHPFSIED*QCSRTR
Trigger: ACGAGTCCTGCTGCACTGCCAGTCTTCAATGCTAAA...GGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGGACTTGACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR CCA 90 bp TTGCTGTCAAGTCCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATGAGGTACTGCATGTCTaGGTCCCAGGTTGTGCTGTT +
Preference number: 4 (lower is better)
Translates to: LLSSPHSCHRNACAAFHHEVLHV*VPGCAV
Trigger: AACAGCACAACCTGGGACCCAGACATGCAGTACCTC...ATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGGACTTGACAGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR TCA 90 bp TTGCTGTCAAGTCCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATGAGAGGTTCTTCGTCTaGGCTGGGAAAGTCATACTG +
Preference number: 4 (lower is better)
Translates to: LLSSPHSCHRNACAAFHHERFFV*AGKVIL
Trigger: CAGTATGACTTTCCCAGCTCAGACGAAGAACCTCTC...ATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGGACTTGACAGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR TCA 90 bp ATGAGAGATGAGCATTGCTGTCAAGTCCCCACAGCTGCCACAGAAACGCATGTGGAGAGGTTCTTCGTCTaGGCTGGGAAAGTCATACTG +
Preference number: 4 (lower is better)
Translates to: MRDEHCCQVPTAATETHVERFFV*AGKVIL
Trigger: CAGTATGACTTTCCCAGCTCAGACGAAGAACCTCTC...CACATGCGTTTCTGTGGCAGCTGTGGGGACTTGACAGCAATGCTCATCTCTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR TCA 90 bp AGTCCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATAGTGCCAGTTGCTGTTaGTGTTGCTGGTATTGTTCG +
Preference number: 4 (lower is better)
Translates to: SPHSCHRNACAAFHHPLHSASCC*CCWYCS
Trigger: CGAACAATACCAGCAACATCAACAGCAACTGGCACT...ATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR TCA 90 bp CTGTCAAGTCCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCCAGTGCTGGCTTTTCTaGTTCATGATTTTCCCTTGG +
Preference number: 4 (lower is better)
Translates to: LSSPHSCHRNACAAFHHPQCWLF*FMIFPW
Trigger: CCAAGGGAAAATCATGAATCAGAAAAGCCAGCACTG...GGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGGACTTGACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR GCA 90 bp TTTAAATGGCTGTACCTGAAAACCAAGGTATGCAATTCCTTAGGATTAGAAGTCCCACTCGCCAACCGCTaGCGGGGACTTGAGGGGCGG +
Preference number: 4 (lower is better)
Translates to: FKWLYLKTKVCNSLGLEVPLANR*RGLEGR
Trigger: CCGCCCCTCAAGTCCCCGGCAGCGGTTGGCGAGTGG...GACTTCTAATCCTAAGGAATTGCATACCTTGGTTTTCAGGTACAGCCATTTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000469059.2
CDS-3UTR GCA 90 bp CACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAAAATCGAGGCGTATTCGTaGAGGTCGGGCAGATCCTCA +
Preference number: 4 (lower is better)
Translates to: HSCHRNACAAFHHPLHSKIEAYS*RSGRSS
Trigger: TGAGGATCTGCCCGACCTGCACGAATACGCCTCGAT...TTTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000667706.1
CDS-3UTR GCA 90 bp AGTGCTTTAAGTACCAGAAACCACCCACAGCTTTGTGGGCAAGTTGGGGATGGATTCTCGCCATACACCTaGTGTGCTGAAATAGCCCGC +
Preference number: 4 (lower is better)
Translates to: SALSTRNHPQLCGQVGDGFSPYT*CAEIAR
Trigger: GCGGGCTATTTCAGCACAGCAGGTGTATGGCGAGAA...TCCATCCCCAACTTGCCCACAAAGCTGTGGGTGGTTTCTGGTACTTAAAGCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
CDS-3UTR GCA 90 bp GCTGTCAAGTCCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCATTGGCTGTCTCTGTaGCATAACCTCAGACATGAT +
Preference number: 4 (lower is better)
Translates to: AVKSPQLPQKRMCCFPSSHWLSL*HNLRHD
Trigger: ATCATGTCTGAGGTTATGGCACAGAGACAGCCAATG...GGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGGACTTGACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR GCA 90 bp GTCCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCCCAACCCGTCTTCGTaGAAATCCAATACACCTTTG +
Preference number: 4 (lower is better)
Translates to: VPTAATETHVLLSIIPCIPNPSS*KSNTPL
Trigger: CAAAGGTGTATTGGATTTGCACGAAGACGGGTTGGG...AATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR GCA 90 bp TGCTGTCAAGTCCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCGTCCGAGGCCTAAAATaGCGCCATCTACATGATTTG +
Preference number: 4 (lower is better)
Translates to: CCQVPTAATETHVLLSIIVRGLK*RHLHDL
Trigger: CAAATCATGTAGATGGCGGCATTTTAGGCCTCGGAC...GATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGGACTTGACAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR GCA 90 bp CCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCACAGAAACGCATGTGCTaGTTTCCATCATCCCTTGCA +
Preference number: 4 (lower is better)
Translates to: PHSCHRNACAAFHHPLHSQKRMC*FPSSLA
Trigger: TGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTG...TGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR CCA 90 bp TTTACAAAATACCAAGGAGTCCACAGCTACCTAACACATTTACTACAGCACAGGCGGCCAGCGGGATCATaGAGAACCGGGGGTTCGGTC +
Preference number: 4 (lower is better)
Translates to: FTKYQGVHSYLTHLLQHRRPAGS*RTGGSV
Trigger: GACCGAACCCCCGGTTCTCCATGATCCCGCTGGCCG...CCTGTGCTGTAGTAAATGTGTTAGGTAGCTGTGGACTCCTTGGTATTTTGTAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000667706.1
CDS-3UTR CCA 90 bp TACACAGAAAACTCAAGGACCCAGAGGGGAACCAAGTTATGTTATACCATTTACCCTTCTCCATTCCGGTaGGCATCTGCGGCACGGCCC +
Preference number: 4 (lower is better)
Translates to: YTENSRTQRGTKLCYTIYPSPFR*ASAARP
Trigger: GGGCCGTGCCGCAGATGCCCACCGGAATGGAGAAGG...GTAAATGGTATAACATAACTTGGTTCCCCTCTGGGTCCTTGAGTTTTCTGTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000667706.1
CDS-3UTR CCA 90 bp TTTACAAAATACCAAGGAGTCCACAGCTACCTAACACATTTACTACAGCACAGGCCTTCTCCATTCCGGTaGGCATCTGCGGCACGGCCC +
Preference number: 4 (lower is better)
Translates to: FTKYQGVHSYLTHLLQHRPSPFR*ASAARP
Trigger: GGGCCGTGCCGCAGATGCCCACCGGAATGGAGAAGG...CCTGTGCTGTAGTAAATGTGTTAGGTAGCTGTGGACTCCTTGGTATTTTGTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000667706.1
CDS-3UTR CCA 90 bp AGTGCTTTAAGTACCAGAAACCACCCACAGCTTTGTGGGCAAGTTGGGGATGGATTCCTGCAGACTGACTaGCTGCTGACCACTGCCTTT +
Preference number: 4 (lower is better)
Translates to: SALSTRNHPQLCGQVGDGFLQTD*LLTTAF
Trigger: AAAGGCAGTGGTCAGCAGCCAGTCAGTCTGCAGGAA...TCCATCCCCAACTTGCCCACAAAGCTGTGGGTGGTTTCTGGTACTTAAAGCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
CDS-3UTR CCA 90 bp TCCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCTTTAGCATTGAAGACTaGCAGTGCAGCAGGACTCGT +
Preference number: 4 (lower is better)
Translates to: SPQLPQKRMCCFPSSLAFFSIED*QCSRTR
Trigger: ACGAGTCCTGCTGCACTGCCAGTCTTCAATGCTAAA...GAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR CCA 90 bp CCACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAAGAGGTACTGCATGTCTaGGTCCCAGGTTGTGCTGTT +
Preference number: 4 (lower is better)
Translates to: PQLPQKRMCCFPSSLAFKEVLHV*VPGCAV
Trigger: AACAGCACAACCTGGGACCCAGACATGCAGTACCTC...TTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR TCA 90 bp AAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAAATGCTACTGATGCATTGGCTTCCTGCAGACTaGCTGGCTGCTGACCACTGC +
Preference number: 4 (lower is better)
Translates to: KRMCCFPSSLAFKMLLMHWLPAD*LAADHC
Trigger: GCAGTGGTCAGCAGCCAGTCAGTCTGCAGGAAGCCA...ATGCATCAGTAGCATTTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR TCA 90 bp ATGAGAGATGAGCATTGCTGTCAAGTCCCCACAGCTGCCACAGAAACGCATGTGAGTGCCAGTTGCTGTTaGTGTTGCTGGTATTGTTCG +
Preference number: 4 (lower is better)
Translates to: MRDEHCCQVPTAATETHVSASCC*CCWYCS
Trigger: CGAACAATACCAGCAACATCAACAGCAACTGGCACT...CACATGCGTTTCTGTGGCAGCTGTGGGGACTTGACAGCAATGCTCATCTCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR TCA 90 bp AAGATGGGACCTTGGAAACTTGACAGTTTGCTGCAGCGGCCAGCTTTAAGGCAGTCCCATCAGTTGTTCTaGTGTCACCAAAGCAGAAGC +
Preference number: 4 (lower is better)
Translates to: KMGPWKLDSLLQRPALRQSHQLF*CHQSRS
Trigger: GCTTCTGCTTTGGTGACATCAGAACAACTGATGGGA...CTGCCTTAAAGCTGGCCGCTGCAGCAAACTGTCAAGTTTCCAAGGTCCCATCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667706.1
CDS-3UTR TCA 90 bp ATGAGAGATGAGCATTGCTGTCAAGTCCCCACAGCTGCCACAGAAACGCATGTGTCCGCACCATGCACATaGTGTGATGACACTTCATCT +
Preference number: 4 (lower is better)
Translates to: MRDEHCCQVPTAATETHVSAPCT*CDDTSS
Trigger: AGATGAAGTGTCATCACATCATGTGCATGGTGCGGA...CACATGCGTTTCTGTGGCAGCTGTGGGGACTTGACAGCAATGCTCATCTCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR GCA 90 bp CAATCTGAGCTACTACATACACTTGGCTTATCTGTAAAGTTAGATTTAAGACACCCACTCGCCAACCGCTaGCGGGGACTTGAGGGGCGG +
Preference number: 4 (lower is better)
Translates to: QSELLHTLGLSVKLDLRHPLANR*RGLEGR
Trigger: CCGCCCCTCAAGTCCCCGGCAGCGGTTGGCGAGTGG...GTGTCTTAAATCTAACTTTACAGATAAGCCAAGTGTATGTAGTAGCTCAGATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000469059.2
ENST00000480402.1
CDS-3UTR GCA 90 bp GTGCTGAAAGTCAGTGCCCAACTAGACAATCTGAGCTACTACATACACTTGGCTATCGAGGCGTATTCGTaGAGGTCGGGCAGATCCTCA +
Preference number: 4 (lower is better)
Translates to: VLKVSAQLDNLSYYIHLAIEAYS*RSGRSS
Trigger: TGAGGATCTGCCCGACCTGCACGAATACGCCTCGAT...AGCCAAGTGTATGTAGTAGCTCAGATTGTCTAGTTGGGCACTGACTTTCAGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000469059.2
ENST00000480402.1
CDS-3UTR GCA 90 bp GCTGTCAAGTCCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCAGCAATATTACTTTCTaGCTCTGGGACCGGTATAAC +
Preference number: 4 (lower is better)
Translates to: AVKSPQLPQKRMCCFPSSSNITF*LWDRYN
Trigger: GTTATACCGGTCCCAGAGGCAGAAAGTAATATTGCT...GGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGGACTTGACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR GCA 90 bp GCTGTCAAGTCCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCATAAGGATCATTTGTaGTGGAACCATCTCGCTTCT +
Preference number: 4 (lower is better)
Translates to: AVKSPQLPQKRMCCFPSSHKDHL*WNHLAS
Trigger: AGAAGCGAGATGGTTCCAGCACAAATGATCCTTATG...GGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGGACTTGACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR GCA 90 bp CCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCACATTGGCTGTCTCTGTaGCATAACCTCAGACATGAT +
Preference number: 4 (lower is better)
Translates to: PHSCHRNACAAFHHPLHSHWLSL*HNLRHD
Trigger: ATCATGTCTGAGGTTATGGCACAGAGACAGCCAATG...TGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR GCA 90 bp TTGCTGTCAAGTCCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCAACCCGTCTTCGTaGAAATCCAATACACCTTTG +
Preference number: 4 (lower is better)
Translates to: LLSSPHSCHRNACAAFHHPNPSS*KSNTPL
Trigger: CAAAGGTGTATTGGATTTGCACGAAGACGGGTTGGG...ATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGGACTTGACAGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR GCA 90 bp CCACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAACTGGGTCCCAGGTTGTaGTGTTCCTGTTCGGTTTAT +
Preference number: 4 (lower is better)
Translates to: PQLPQKRMCCFPSSLAFKLGPRL*CSCSVY
Trigger: ATAAACCGAACAGGAACAGCACAACCTGGGACCCAG...TTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR GCA 90 bp TGCTGTCAAGTCCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCTGTTTCTGCATGAGTaGCAGTTGCTGTTGATGTTG +
Preference number: 4 (lower is better)
Translates to: CCQVPTAATETHVLLSIILFLHE*QLLLML
Trigger: CAACATCAACAGCAACTGGCACTCATGCAGAAACAG...GATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGGACTTGACAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR GCA 90 bp GCTGTCAAGTCCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTGTTGCTGAATTTGTaGAAGCTGCTGTTTCTGCAT +
Preference number: 4 (lower is better)
Translates to: AVKSPQLPQKRMCCFPSSLLLNL*KLLFLH
Trigger: ATGCAGAAACAGCAGCTTGCACAAATTCAGCAACAG...GGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGGACTTGACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR GCA 90 bp AGTCCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATCGAAAGCCACTTTTCTaGTGGTTAGATGCAAGGTTC +
Preference number: 4 (lower is better)
Translates to: SPHSCHRNACAAFHHPLHRKPLF*WLDARF
Trigger: GAACCTTGCATCTAACCAGCAGAAAAGTGGCTTTCG...ATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263062.8
CDS-3UTR GCA 90 bp CCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCACAGAACCTGAGTTGTTaGAGAATTGGCAGCAGTTAC +
Preference number: 4 (lower is better)
Translates to: PHSCHRNACAAFHHPLHSQNLSC*RIGSSY
Trigger: GTAACTGCTGCCAATTCTGCAACAACTCAGGTTCTG...TGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR GCA 90 bp ATGAGAGATGAGCATTGCTGTCAAGTCCCCACAGCTGCCACAGAAACGCATGTGCGCTACTGTGTTGTCTaGTATGTTGTTCAGTGCTGG +
Preference number: 4 (lower is better)
Translates to: MRDEHCCQVPTAATETHVRYCVV*YVVQCW
Trigger: CCAGCACTGAACAACATAGCAGACAACACAGTAGCG...CACATGCGTTTCTGTGGCAGCTGTGGGGACTTGACAGCAATGCTCATCTCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR GCA 90 bp CACTTTTTGGTGTGGAAGGAAATGGGACTACTGGGCTGTTCGCAGAGCAGCAACATGAGAGATGAGCATTaGTGTCAAGTCCCCACAGCT +
Preference number: 4 (lower is better)
Translates to: HFLVWKEMGLLGCSQSSNMRDEH*CQVPTA
Trigger: AGCTGTGGGGACTTGACAGCAATGCTCATCTCTCAT...GTTGCTGCTCTGCGAACAGCCCAGTAGTCCCATTTCCTTCCACACCAAAAAGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
CDS-3UTR GCA 90 bp TTGCTGTCAAGTCCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATATGAGAGATGAGCATTaGTGTCAAGTCCCCACAGCT +
Preference number: 4 (lower is better)
Translates to: LLSSPHSCHRNACAAFHHMRDEH*CQVPTA
Trigger: AGCTGTGGGGACTTGACAGCAATGCTCATCTCTCAT...ATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGGACTTGACAGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR CCA 90 bp TTGCTGTCAAGTCCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATTTTAGCATTGAAGACTaGCAGTGCAGCAGGACTCGT +
Preference number: 4 (lower is better)
Translates to: LLSSPHSCHRNACAAFHHFSIED*QCSRTR
Trigger: ACGAGTCCTGCTGCACTGCCAGTCTTCAATGCTAAA...ATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGGACTTGACAGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR CCA 90 bp ATGAGCATTGCTGTCAAGTCCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTTGTATGCCATTGGACTaGGCATTCAGACTTCGGTAC +
Preference number: 4 (lower is better)
Translates to: MSIAVKSPQLPQKRMCCFCMPLD*AFRLRY
Trigger: GTACCGAAGTCTGAATGCCCAGTCCAATGGCATACA...AAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGGACTTGACAGCAATGCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
3UTR CAA 72 bp CAGAGGATGAAGATGGGACCTTGGAAACTTGACAGTTaGCTGCAGCGGCCAGCTTTAAGGCAGATGATGGAA +
Preference number: 4 (lower is better)
Translates to: QRMKMGPWKLDS*LQRPALRQMME
Trigger: TTCCATCATCTGCCTTAAAGCTGGCCGCTGCAGCAAACTGTCAAGTTTCCAAGGTCCCATCTTCATCCTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667706.1
3UTR CAA 72 bp CTCGGAGGAAGCTACGTCACCTCCATCGCTACTGTGTaGTCTGCTATGTTGTTCAGTGCTGGCTTTTCTGAT +
Preference number: 4 (lower is better)
Translates to: LGGSYVTSIATV*SAMLFSAGFSD
Trigger: ATCAGAAAAGCCAGCACTGAACAACATAGCAGACAACACAGTAGCGATGGAGGTGACGTAGCTTCCTCCGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000667706.1
CDS-3UTR TCA 90 bp ACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAAATAGACTGACTGGCTGCTaGCCACTGCCTTTTTCTAGG +
Preference number: 4 (lower is better)
Translates to: TAATETHVLLSIIPCIQNRLTGC*PLPFSR
Trigger: CCTAGAAAAAGGCAGTGGTCAGCAGCCAGTCAGTCT...ATTTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR TCA 90 bp TGCTGTCAAGTCCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCTATTGGCAAACTGATTaGCTGGAGAATGTTGTGGTG +
Preference number: 4 (lower is better)
Translates to: CCQVPTAATETHVLLSIIYWQTD*LENVVV
Trigger: CACCACAACATTCTCCAGTCAATCAGTTTGCCAATA...GATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGGACTTGACAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR TCA 90 bp CAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAAATGCTACTGATGGCCCTTGTATACTCCTaGGGCTGGAAGGACGCCATT +
Preference number: 4 (lower is better)
Translates to: QKRMCCFPSSLAFKMLLMALVYS*GWKDAI
Trigger: AATGGCGTCCTTCCAGCCTCAGGAGTATACAAGGGC...CATCAGTAGCATTTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR TCA 90 bp TTGCTGTCAAGTCCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCAGTGCTGGCTTTTCTaGTTCATGATTTTCCCTTGG +
Preference number: 4 (lower is better)
Translates to: LLSSPHSCHRNACAAFHHQCWLF*FMIFPW
Trigger: CCAAGGGAAAATCATGAATCAGAAAAGCCAGCACTG...ATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGGACTTGACAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR TCA 90 bp AGTGCTTTAAGTACCAGAAACCACCCACAGCTTTGTGGGCAAGTTGGGGATGGATTGAAGCATGAGAGATaGGCATTGCTGTCAAGTCCC +
Preference number: 4 (lower is better)
Translates to: SALSTRNHPQLCGQVGDGLKHER*ALLSSP
Trigger: GGGACTTGACAGCAATGCTCATCTCTCATGCTTCAA...TCCATCCCCAACTTGCCCACAAAGCTGTGGGTGGTTTCTGGTACTTAAAGCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
CDS-3UTR GCA 90 bp GCTGAAAGTCAGTGCCCAACTAGACAATCTGAGCTACTACATACACTTGGCTTAATCGAGGCGTATTCGTaGAGGTCGGGCAGATCCTCA +
Preference number: 4 (lower is better)
Translates to: AESQCPTRQSELLHTLGLIEAYS*RSGRSS
Trigger: TGAGGATCTGCCCGACCTGCACGAATACGCCTCGAT...TAAGCCAAGTGTATGTAGTAGCTCAGATTGTCTAGTTGGGCACTGACTTTCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000469059.2
ENST00000480402.1
CDS-3UTR GCA 90 bp CTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAAATGCTATTCTCGCCATACACCTaGTGTGCTGAAATAGCCCGC +
Preference number: 4 (lower is better)
Translates to: LPQKRMCCFPSSLAFKMLFSPYT*CAEIAR
Trigger: GCGGGCTATTTCAGCACAGCAGGTGTATGGCGAGAA...TAGCATTTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR GCA 90 bp TGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAAATGCTACCTGGCTGCTGACCACTaGCTTTTTCTAGGCGGTCAA +
Preference number: 4 (lower is better)
Translates to: CHRNACAAFHHPLHSKCYLAADH*LFLGGQ
Trigger: TTGACCGCCTAGAAAAAGGCAGTGGTCAGCAGCCAG...GTAGCATTTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR GCA 90 bp AGTCCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATCTGCTACTTTTACTTTaGGTAGAGGTACTGCATGTC +
Preference number: 4 (lower is better)
Translates to: SPHSCHRNACAAFHHPLHLLLLL*VEVLHV
Trigger: GACATGCAGTACCTCTACGCAAAGTAAAAGTAGCAG...ATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR GCA 90 bp TGCTGTCAAGTCCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCTGTTGCTGAATTTGTaGAAGCTGCTGTTTCTGCAT +
Preference number: 4 (lower is better)
Translates to: CCQVPTAATETHVLLSIILLLNL*KLLFLH
Trigger: ATGCAGAAACAGCAGCTTGCACAAATTCAGCAACAG...GATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGGACTTGACAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR GCA 90 bp CCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAGAAGCAGCAAACTGTaGACTAGCAGAATCCAAAGT +
Preference number: 4 (lower is better)
Translates to: PHSCHRNACAAFHHPLHSRSSKL*TSRIQS
Trigger: ACTTTGGATTCTGCTAGTGCACAGTTTGCTGCTTCT...TGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR GCA 90 bp ATGAGCATTGCTGTCAAGTCCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTCAGAACCTGAGTTGTTaGAGAATTGGCAGCAGTTAC +
Preference number: 4 (lower is better)
Translates to: MSIAVKSPQLPQKRMCCFQNLSC*RIGSSY
Trigger: GTAACTGCTGCCAATTCTGCAACAACTCAGGTTCTG...AAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGGACTTGACAGCAATGCTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR CCA 90 bp TTTAAATGGCTGTACCTGAAAACCAAGGTATGCAATTCCTTAGGATTAGAAGTCCGGCCAGCGGGATCATaGAGAACCGGGGGTTCGGTC +
Preference number: 4 (lower is better)
Translates to: FKWLYLKTKVCNSLGLEVRPAGS*RTGGSV
Trigger: GACCGAACCCCCGGTTCTCCATGATCCCGCTGGCCG...GACTTCTAATCCTAAGGAATTGCATACCTTGGTTTTCAGGTACAGCCATTTAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469059.2
CDS-3UTR CCA 90 bp GCTGTCAAGTCCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTCCTCAAATTGCAATaGGCAGATGTCCATTTTCTT +
Preference number: 4 (lower is better)
Translates to: AVKSPQLPQKRMCCFPSSLLKLQ*ADVHFL
Trigger: AAGAAAATGGACATCTGCCCATTGCAATTTGAGGAG...GGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGGACTTGACAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR CCA 90 bp TGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAAATGCTACTTCCTGCAGACTGACTaGCTGCTGACCACTGCCTTT +
Preference number: 4 (lower is better)
Translates to: CHRNACAAFHHPLHSKCYFLQTD*LLTTAF
Trigger: AAAGGCAGTGGTCAGCAGCCAGTCAGTCTGCAGGAA...GTAGCATTTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR CCA 90 bp CTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAAATGCTATTCCTGCAGACTGACTaGCTGCTGACCACTGCCTTT +
Preference number: 4 (lower is better)
Translates to: LPQKRMCCFPSSLAFKMLFLQTD*LLTTAF
Trigger: AAAGGCAGTGGTCAGCAGCCAGTCAGTCTGCAGGAA...TAGCATTTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR CCA 90 bp TCCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAGGATCATTTGTGCTaGAACCATCTCGCTTCTCTT +
Preference number: 4 (lower is better)
Translates to: SPQLPQKRMCCFPSSLAFKDHLC*NHLASL
Trigger: AAGAGAAGCGAGATGGTTCCAGCACAAATGATCCTT...GAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR CCA 90 bp GAGCAGCAACATAATATTAGTGCTTTAAGTACCAGAAACCACCCACAGCTTTGTGCAGGACTCGTCTGTTaGGGAGTAGCAGCGGCAGAC +
Preference number: 4 (lower is better)
Translates to: EQQHNISALSTRNHPQLCAGLVC*GVAAAD
Trigger: GTCTGCCGCTGCTACTCCCCAACAGACGAGTCCTGC...ACAAAGCTGTGGGTGGTTTCTGGTACTTAAAGCACTAATATTATGTTGCTGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
CDS-3UTR CCA 90 bp TACACAGAAAACTCAAGGACCCAGAGGGGAACCAAGTTATGTTATACCATTTACGCAGGACTCGTCTGTTaGGGAGTAGCAGCGGCAGAC +
Preference number: 4 (lower is better)
Translates to: YTENSRTQRGTKLCYTIYAGLVC*GVAAAD
Trigger: GTCTGCCGCTGCTACTCCCCAACAGACGAGTCCTGC...GTAAATGGTATAACATAACTTGGTTCCCCTCTGGGTCCTTGAGTTTTCTGTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR CCA 90 bp GTCCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTGTTCTTCGTCTGAGCTaGGAAAGTCATACTGATTCA +
Preference number: 4 (lower is better)
Translates to: VPTAATETHVLLSIIPCIVLRLS*ESHTDS
Trigger: TGAATCAGTATGACTTTCCCAGCTCAGACGAAGAAC...AATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR CCA 90 bp CACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAAAGAGCCAGACAAAACCTaGGAGAGAGGTTCTTCGTCT +
Preference number: 4 (lower is better)
Translates to: HSCHRNACAAFHHPLHSKEPDKT*ERGSSS
Trigger: AGACGAAGAACCTCTCTCCCAGGTTTTGTCTGGCTC...TTTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR CCA 90 bp TCCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAATCCAATACACCTTTaGGGTACGGTGAGAGTAGTT +
Preference number: 4 (lower is better)
Translates to: SPQLPQKRMCCFPSSLAFNPIHL*GTVRVV
Trigger: AACTACTCTCACCGTACCCCAAAGGTGTATTGGATT...GAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR CCA 90 bp TGCTGTCAAGTCCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCAAGCCACTTTTCTGCTaGTTAGATGCAAGGTTCTGT +
Preference number: 4 (lower is better)
Translates to: CCQVPTAATETHVLLSIIKPLFC*LDARFC
Trigger: ACAGAACCTTGCATCTAACCAGCAGAAAAGTGGCTT...GATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGGACTTGACAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263062.8
CDS-3UTR CCA 90 bp TTGCTGTCAAGTCCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATGCTTTGTGGGCAAGTTaGGGATGGAAAGATTCAAGA +
Preference number: 4 (lower is better)
Translates to: LLSSPHSCHRNACAAFHHALWAS*GWKDSR
Trigger: TCTTGAATCTTTCCATCCCCAACTTGCCCACAAAGC...ATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGGACTTGACAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
CDS-3UTR CCA 90 bp AACTCAAGGACCCAGAGGGGAACCAAGTTATGTTATACCATTTACAAAATACCAGGTGGCCGAATGGGGTaGCTTCCCCCAGGATCTGTG +
Preference number: 4 (lower is better)
Translates to: NSRTQRGTKLCYTIYKIPGGRMG*LPPGSV
Trigger: CACAGATCCTGGGGGAAGCCACCCCATTCGGCCACC...TGGTATTTTGTAAATGGTATAACATAACTTGGTTCCCCTCTGGGTCCTTGAGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000375110.6
3UTR CAA 72 bp TGCAAGCTGCTGTTTCTGCATGAGTGCCAGTTGCTGTaGATGTTGCTGGTATTGTTCGGCTGTAAATGCTGG +
Preference number: 4 (lower is better)
Translates to: CKLLFLHECQLL*MLLVLFGCKCW
Trigger: CCAGCATTTACAGCCGAACAATACCAGCAACATCAACAGCAACTGGCACTCATGCAGAAACAGCAGCTTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667706.1
CDS-3UTR TCA 90 bp TGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAAATGCTACATACACCTGCTGTGCTaGAATAGCCCGCTGAAGATG +
Preference number: 4 (lower is better)
Translates to: CHRNACAAFHHPLHSKCYIHLLC*NSPLKM
Trigger: CATCTTCAGCGGGCTATTTCAGCACAGCAGGTGTAT...GTAGCATTTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR TCA 90 bp TTGCTGTCAAGTCCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATGAGGTATTGGCAAACTaGTTGACTGGAGAATGTTGT +
Preference number: 4 (lower is better)
Translates to: LLSSPHSCHRNACAAFHHEVLAN*LTGECC
Trigger: ACAACATTCTCCAGTCAATCAGTTTGCCAATACCTC...ATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGGACTTGACAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR TCA 90 bp CTGTCAAGTCCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCCATTCAAAATGCTACTaGTGCATAGCACCTAATCAA +
Preference number: 4 (lower is better)
Translates to: LSSPHSCHRNACAAFHHPHSKCY*CIAPNQ
Trigger: TTGATTAGGTGCTATGCATCAGTAGCATTTTGAATG...GGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGGACTTGACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR TCA 90 bp ATGAGCATTGCTGTCAAGTCCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTAGAAACAAAACCCTGTaGTGTGTTGGTGGAGGAATT +
Preference number: 4 (lower is better)
Translates to: MSIAVKSPQLPQKRMCCFRNKTL*CVGGGI
Trigger: AATTCCTCCACCAACACATCACAGGGTTTTGTTTCT...AAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGGACTTGACAGCAATGCTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR TCA 90 bp ATGAGAGATGAGCATTGCTGTCAAGTCCCCACAGCTGCCACAGAAACGCATGTGCAGCACAGGAACCAATaGAGGTACAGTGTACAAAAA +
Preference number: 4 (lower is better)
Translates to: MRDEHCCQVPTAATETHVQHRNQ*RYSVQK
Trigger: TTTTTGTACACTGTACCTTCATTGGTTCCTGTGCTG...CACATGCGTTTCTGTGGCAGCTGTGGGGACTTGACAGCAATGCTCATCTCTCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR GCA 90 bp TCCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCCTCCTTCACATCCATTaGTTCCTGGTGTTTAAATTG +
Preference number: 4 (lower is better)
Translates to: SPQLPQKRMCCFPSSLAFLLHIH*FLVFKL
Trigger: CAATTTAAACACCAGGAAGCAATGGATGTGAAGGAG...GAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR GCA 90 bp ATGAGCATTGCTGTCAAGTCCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTATAGTACTGACAGCCTaGTTTCCTACGGAAAGCAAA +
Preference number: 4 (lower is better)
Translates to: MSIAVKSPQLPQKRMCCFIVLTA*FPTESK
Trigger: TTTGCTTTCCGTAGGAAAGCAGGCTGTCAGTACTAT...AAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGGACTTGACAGCAATGCTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR GCA 90 bp TGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAAATGCTACCTGGGTCCCAGGTTGTaGTGTTCCTGTTCGGTTTAT +
Preference number: 4 (lower is better)
Translates to: CHRNACAAFHHPLHSKCYLGPRL*CSCSVY
Trigger: ATAAACCGAACAGGAACAGCACAACCTGGGACCCAG...GTAGCATTTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR GCA 90 bp ATTGCTGTCAAGTCCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCACTGCTACTTTTACTTTaGGTAGAGGTACTGCATGTC +
Preference number: 4 (lower is better)
Translates to: IAVKSPQLPQKRMCCFPSLLLLL*VEVLHV
Trigger: GACATGCAGTACCTCTACGCAAAGTAAAAGTAGCAG...TGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGGACTTGACAGCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR GCA 90 bp CTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAAATGCTAGCAAGCTGCTGTTTCTaGATGAGTGCCAGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: LPQKRMCCFPSSLAFKMLASCCF*MSASCC
Trigger: ACAGCAACTGGCACTCATGCAGAAACAGCAGCTTGC...TAGCATTTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR GCA 90 bp AAGATGGGACCTTGGAAACTTGACAGTTTGCTGCAGCGGCCAGCTTTAAGGCAGAGAAGCAGCAAACTGTaGACTAGCAGAATCCAAAGT +
Preference number: 4 (lower is better)
Translates to: KMGPWKLDSLLQRPALRQRSSKL*TSRIQS
Trigger: ACTTTGGATTCTGCTAGTGCACAGTTTGCTGCTTCT...CTGCCTTAAAGCTGGCCGCTGCAGCAAACTGTCAAGTTTCCAAGGTCCCATCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667706.1
CDS-3UTR GCA 90 bp CCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCACCTAGGTATATGTCGTaGATTTATTGGGGCAATAGA +
Preference number: 4 (lower is better)
Translates to: PHSCHRNACAAFHHPLHSPRYMS*IYWGNR
Trigger: TCTATTGCCCCAATAAATGCACGACATATACCTAGG...TGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR GCA 90 bp CACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAAACGCTACTGTGTTGTCTaGTATGTTGTTCAGTGCTGG +
Preference number: 4 (lower is better)
Translates to: HSCHRNACAAFHHPLHSKRYCVV*YVVQCW
Trigger: CCAGCACTGAACAACATAGCAGACAACACAGTAGCG...TTTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR GCA 90 bp GCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAAATGCTCGCTACTGTGTTGTCTaGTATGTTGTTCAGTGCTGG +
Preference number: 4 (lower is better)
Translates to: AATETHVLLSIIPCIQNARYCVV*YVVQCW
Trigger: CCAGCACTGAACAACATAGCAGACAACACAGTAGCG...AGCATTTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR GCA 90 bp AAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAAATGCTACTGATGCATATCAAGTCCCCAGGCTaGAGTTCCACTCGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: KRMCCFPSSLAFKMLLMHIKSPG*SSTRRK
Trigger: CTTCCTCCGAGTGGAACTGCAGCCTGGGGACTTGAT...ATGCATCAGTAGCATTTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR CCA 90 bp GTCCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTATAAGTAGGTTTCATTaGCTGTCTCTGTGCCATAAC +
Preference number: 4 (lower is better)
Translates to: VPTAATETHVLLSIIPCIISRFH*LSLCHN
Trigger: GTTATGGCACAGAGACAGCCAATGAAACCTACTTAT...AATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR CCA 90 bp CTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAAATGCTAGAGCCAGACAAAACCTaGGAGAGAGGTTCTTCGTCT +
Preference number: 4 (lower is better)
Translates to: LPQKRMCCFPSSLAFKMLEPDKT*ERGSSS
Trigger: AGACGAAGAACCTCTCTCCCAGGTTTTGTCTGGCTC...TAGCATTTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR CCA 90 bp AGTCCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATGGTTCTGTGATGTGTTaGTGGAGGAATTACTATTTG +
Preference number: 4 (lower is better)
Translates to: SPHSCHRNACAAFHHPLHGSVMC*WRNYYL
Trigger: CAAATAGTAATTCCTCCACCAACACATCACAGAACC...ATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263062.8
CDS-3UTR CCA 90 bp AAGATGGGACCTTGGAAACTTGACAGTTTGCTGCAGCGGCCAGCTTTAAGGCAGGAGTTGTTGCAGAATTaGCAGCAGTTACTTGATGAC +
Preference number: 4 (lower is better)
Translates to: KMGPWKLDSLLQRPALRQELLQN*QQLLDD
Trigger: GTCATCAAGTAACTGCTGCCAATTCTGCAACAACTC...CTGCCTTAAAGCTGGCCGCTGCAGCAAACTGTCAAGTTTCCAAGGTCCCATCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667706.1
CDS-3UTR CCA 90 bp CTGTCAAGTCCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCATGTCGTGCATTTATTaGGGCAATAGAGTTTACAGT +
Preference number: 4 (lower is better)
Translates to: LSSPHSCHRNACAAFHHPMSCIY*GNRVYS
Trigger: ACTGTAAACTCTATTGCCCCAATAAATGCACGACAT...GGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGGACTTGACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR CCA 90 bp ATTGCTGTCAAGTCCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCAATGAAGATGGGACCTTaGAAACTTGACAGTTTGCTG +
Preference number: 4 (lower is better)
Translates to: IAVKSPQLPQKRMCCFPSMKMGP*KLDSLL
Trigger: CAGCAAACTGTCAAGTTTCCAAGGTCCCATCTTCAT...TGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGGACTTGACAGCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR CCA 90 bp TCCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCCCTGTGATGTGTTGGTaGAGGAATTACTATTTGCTT +
Preference number: 4 (lower is better)
Translates to: SPQLPQKRMCCFPSSLAFPVMCW*RNYYLL
Trigger: AAGCAAATAGTAATTCCTCCACCAACACATCACAGG...GAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR CCA 90 bp ATGAGCATTGCTGTCAAGTCCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTGGCCTTGCAGCCTTCTaGAGAATCTTAAAAGGAAAA +
Preference number: 4 (lower is better)
Translates to: MSIAVKSPQLPQKRMCCFGLAAF*RILKGK
Trigger: TTTTCCTTTTAAGATTCTCCAGAAGGCTGCAAGGCC...AAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGGACTTGACAGCAATGCTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
CDS-3UTR CCA 90 bp AGTGCTTTAAGTACCAGAAACCACCCACAGCTTTGTGGGCAAGTTGGGGATGGAGGATCTGTGGGCTTTTaGGGGAAATCGGAGAAATAT +
Preference number: 4 (lower is better)
Translates to: SALSTRNHPQLCGQVGDGGSVGF*GKSEKY
Trigger: ATATTTCTCCGATTTCCCCCAAAAGCCCACAGATCC...TCCATCCCCAACTTGCCCACAAAGCTGTGGGTGGTTTCTGGTACTTAAAGCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375110.6
CDS-3UTR TCA 90 bp CAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAAATGCTACTGATGATACACCTGCTGTGCTaGAATAGCCCGCTGAAGATG +
Preference number: 4 (lower is better)
Translates to: QKRMCCFPSSLAFKMLLMIHLLC*NSPLKM
Trigger: CATCTTCAGCGGGCTATTTCAGCACAGCAGGTGTAT...CATCAGTAGCATTTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR TCA 90 bp CACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAAACTAAAAGGCTGTATGTaGATGAGCTGCTTTGGCATC +
Preference number: 4 (lower is better)
Translates to: HSCHRNACAAFHHPLHSKLKGCM*MSCFGI
Trigger: GATGCCAAAGCAGCTCATTCACATACAGCCTTTTAG...TTTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR TCA 90 bp ACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAAATGCTACTGATAGACTGACTGGCTGCTaGCCACTGCCTTTTTCTAGG +
Preference number: 4 (lower is better)
Translates to: TETHVLLSIIPCIQNATDRLTGC*PLPFSR
Trigger: CCTAGAAAAAGGCAGTGGTCAGCAGCCAGTCAGTCT...ATCAGTAGCATTTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR TCA 90 bp CCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCATCCTGGTGTTTAAATTaGCTGCTATTAGTAATAGGG +
Preference number: 4 (lower is better)
Translates to: PHSCHRNACAAFHHPLHSSWCLN*LLLVIG
Trigger: CCCTATTACTAATAGCAGTCAATTTAAACACCAGGA...TGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR TCA 90 bp AGTGCTTTAAGTACCAGAAACCACCCACAGCTTTGTGGGCAAGTTGGGGATGGATATTGGCAAACTGATTaGCTGGAGAATGTTGTGGTG +
Preference number: 4 (lower is better)
Translates to: SALSTRNHPQLCGQVGDGYWQTD*LENVVV
Trigger: CACCACAACATTCTCCAGTCAATCAGTTTGCCAATA...TCCATCCCCAACTTGCCCACAAAGCTGTGGGTGGTTTCTGGTACTTAAAGCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
CDS-3UTR TCA 90 bp CCACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAAGAGGTATTGGCAAACTaGTTGACTGGAGAATGTTGT +
Preference number: 4 (lower is better)
Translates to: PQLPQKRMCCFPSSLAFKEVLAN*LTGECC
Trigger: ACAACATTCTCCAGTCAATCAGTTTGCCAATACCTC...TTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR TCA 90 bp ATTGCTGTCAAGTCCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCAAAATGCAAAGTGTGCTaGACCACTGCTACTTTTACT +
Preference number: 4 (lower is better)
Translates to: IAVKSPQLPQKRMCCFPSKCKVC*TTATFT
Trigger: AGTAAAAGTAGCAGTGGTTCAGCACACTTTGCATTT...TGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGGACTTGACAGCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
CDS-3UTR TCA 90 bp ACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAAATAGTGCCAGTTGCTGTTaGTGTTGCTGGTATTGTTCG +
Preference number: 4 (lower is better)
Translates to: TAATETHVLLSIIPCIQNSASCC*CCWYCS
Trigger: CGAACAATACCAGCAACATCAACAGCAACTGGCACT...ATTTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR TCA 90 bp CACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAAATTCCCAATCAGAACCTaGGTTGTTGCAGAATTGGCA +
Preference number: 4 (lower is better)
Translates to: HSCHRNACAAFHHPLHSKFPIRT*VVAELA
Trigger: TGCCAATTCTGCAACAACTCAGGTTCTGATTGGGAA...TTTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR TCA 90 bp ACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAAATTCCGCACCATGCACATaGTGTGATGACACTTCATCT +
Preference number: 4 (lower is better)
Translates to: TAATETHVLLSIIPCIQNSAPCT*CDDTSS
Trigger: AGATGAAGTGTCATCACATCATGTGCATGGTGCGGA...ATTTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR TCA 90 bp TGTGCTGAAAGTCAGTGCCCAACTAGACAATCTGAGCTACTACATACACTTGGCACTCCTGGACTTCCTTaGACTGTCAATACACTGCAC +
Preference number: 4 (lower is better)
Translates to: CAESQCPTRQSELLHTLGTPGLP*TVNTLH
Trigger: GTGCAGTGTATTGACAGTTCAAGGAAGTCCAGGAGT...GCCAAGTGTATGTAGTAGCTCAGATTGTCTAGTTGGGCACTGACTTTCAGCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000469059.2
ENST00000480402.1
CDS-3UTR GCA 90 bp TGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAAATGCTACATTAAAACTCCACTGTaGGCTCTTCAGCCAACCCCA +
Preference number: 4 (lower is better)
Translates to: CHRNACAAFHHPLHSKCYIKTPL*ALQPTP
Trigger: TGGGGTTGGCTGAAGAGCGCACAGTGGAGTTTTAAT...GTAGCATTTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000263062.8
ENST00000667706.1
CDS-3UTR GCA 90 bp TCAAGGACCCAGAGGGGAACCAAGTTATGTTATACCATTTACAAAATACCAAGGATCGAGGCGTATTCGTaGAGGTCGGGCAGATCCTCA +
Preference number: 4 (lower is better)
Translates to: SRTQRGTKLCYTIYKIPRIEAYS*RSGRSS
Trigger: TGAGGATCTGCCCGACCTGCACGAATACGCCTCGAT...CCTTGGTATTTTGTAAATGGTATAACATAACTTGGTTCCCCTCTGGGTCCTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000667706.1
CDS-3UTR GCA 90 bp CACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAAACATTGGCTGTCTCTGTaGCATAACCTCAGACATGAT +
Preference number: 4 (lower is better)
Translates to: HSCHRNACAAFHHPLHSKHWLSL*HNLRHD
Trigger: ATCATGTCTGAGGTTATGGCACAGAGACAGCCAATG...TTTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR GCA 90 bp CACTTTTTGGTGTGGAAGGAAATGGGACTACTGGGCTGTTCGCAGAGCAGCAACCTCCTTCACATCCATTaGTTCCTGGTGTTTAAATTG +
Preference number: 4 (lower is better)
Translates to: HFLVWKEMGLLGCSQSSNLLHIH*FLVFKL
Trigger: CAATTTAAACACCAGGAAGCAATGGATGTGAAGGAG...GTTGCTGCTCTGCGAACAGCCCAGTAGTCCCATTTCCTTCCACACCAAAAAGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
CDS-3UTR GCA 90 bp AACCTTAAGGATAATGTATGCCATTGGACTGGGCATTCAGACTTCGGTACTGACATTGAAGACTGGCAGTaGAGCAGGACTCGTCTGTTG +
Preference number: 4 (lower is better)
Translates to: NLKDNVCHWTGHSDFGTDIEDWQ*SRTRLL
Trigger: CAACAGACGAGTCCTGCTGCACTGCCAGTCTTCAAT...GTCAGTACCGAAGTCTGAATGCCCAGTCCAATGGCATACATTATCCTTAAGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
CDS-3UTR GCA 90 bp CCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAAATGCTACTGCCCAACCCGTCTTCGTaGAAATCCAATACACCTTTG +
Preference number: 4 (lower is better)
Translates to: PQKRMCCFPSSLAFKMLLPNPSS*KSNTPL
Trigger: CAAAGGTGTATTGGATTTGCACGAAGACGGGTTGGG...CAGTAGCATTTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR GCA 90 bp TGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAAATGCTACCCCAACCCGTCTTCGTaGAAATCCAATACACCTTTG +
Preference number: 4 (lower is better)
Translates to: CHRNACAAFHHPLHSKCYPNPSS*KSNTPL
Trigger: CAAAGGTGTATTGGATTTGCACGAAGACGGGTTGGG...GTAGCATTTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR GCA 90 bp CTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAAATGCTAGTCCGAGGCCTAAAATaGCGCCATCTACATGATTTG +
Preference number: 4 (lower is better)
Translates to: LPQKRMCCFPSSLAFKMLVRGLK*RHLHDL
Trigger: CAAATCATGTAGATGGCGGCATTTTAGGCCTCGGAC...TAGCATTTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR GCA 90 bp AGTGCTTTAAGTACCAGAAACCACCCACAGCTTTGTGGGCAAGTTGGGGATGGACTGCTACTTTTACTTTaGGTAGAGGTACTGCATGTC +
Preference number: 4 (lower is better)
Translates to: SALSTRNHPQLCGQVGDGLLLLL*VEVLHV
Trigger: GACATGCAGTACCTCTACGCAAAGTAAAAGTAGCAG...TCCATCCCCAACTTGCCCACAAAGCTGTGGGTGGTTTCTGGTACTTAAAGCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
CDS-3UTR GCA 90 bp CACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAAACTGTTTCTGCATGAGTaGCAGTTGCTGTTGATGTTG +
Preference number: 4 (lower is better)
Translates to: HSCHRNACAAFHHPLHSKLFLHE*QLLLML
Trigger: CAACATCAACAGCAACTGGCACTCATGCAGAAACAG...TTTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR GCA 90 bp CCACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAACTGTTGCTGAATTTGTaGAAGCTGCTGTTTCTGCAT +
Preference number: 4 (lower is better)
Translates to: PQLPQKRMCCFPSSLAFKLLLNL*KLLFLH
Trigger: ATGCAGAAACAGCAGCTTGCACAAATTCAGCAACAG...TTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR GCA 90 bp TACACAGAAAACTCAAGGACCCAGAGGGGAACCAAGTTATGTTATACCATTTACATCAAGTCCCCAGGCTaGAGTTCCACTCGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: YTENSRTQRGTKLCYTIYIKSPG*SSTRRK
Trigger: CTTCCTCCGAGTGGAACTGCAGCCTGGGGACTTGAT...GTAAATGGTATAACATAACTTGGTTCCCCTCTGGGTCCTTGAGTTTTCTGTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR GCA 90 bp TGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAAATGCTACCAGAAACGCATGTGCTaGTTTCCATCATCCCTTGCA +
Preference number: 4 (lower is better)
Translates to: CHRNACAAFHHPLHSKCYQKRMC*FPSSLA
Trigger: TGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTG...GTAGCATTTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR GCA 90 bp ATGAGCATTGCTGTCAAGTCCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTCTTAAGGATAATGTATaGCATTGGACTGGGCATTCA +
Preference number: 4 (lower is better)
Translates to: MSIAVKSPQLPQKRMCCFLKDNV*HWTGHS
Trigger: TGAATGCCCAGTCCAATGGCATACATTATCCTTAAG...AAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGGACTTGACAGCAATGCTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
CDS-3UTR CCA 90 bp TTGCTGTCAAGTCCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCTCCTCAAATTGCAATaGGCAGATGTCCATTTTCTT +
Preference number: 4 (lower is better)
Translates to: LLSSPHSCHRNACAAFHHLLKLQ*ADVHFL
Trigger: AAGAAAATGGACATCTGCCCATTGCAATTTGAGGAG...ATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGGACTTGACAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR CCA 90 bp ATTGCTGTCAAGTCCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCAATAAGTAGGTTTCATTaGCTGTCTCTGTGCCATAAC +
Preference number: 4 (lower is better)
Translates to: IAVKSPQLPQKRMCCFPSISRFH*LSLCHN
Trigger: GTTATGGCACAGAGACAGCCAATGAAACCTACTTAT...TGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGGACTTGACAGCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR CCA 90 bp CAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAAATGCTACTGATGGAGCCAGACAAAACCTaGGAGAGAGGTTCTTCGTCT +
Preference number: 4 (lower is better)
Translates to: QKRMCCFPSSLAFKMLLMEPDKT*ERGSSS
Trigger: AGACGAAGAACCTCTCTCCCAGGTTTTGTCTGGCTC...CATCAGTAGCATTTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR CCA 90 bp TGTGCTGAAAGTCAGTGCCCAACTAGACAATCTGAGCTACTACATACACTTGGCTGCACCCTGTTTAAATaGCTGTACCGACTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: CAESQCPTRQSELLHTLGCTLFK*LYRLLF
Trigger: GAAGAGGAGTCGGTACAGCCATTTAAACAGGGTGCA...GCCAAGTGTATGTAGTAGCTCAGATTGTCTAGTTGGGCACTGACTTTCAGCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480402.1
CDS-3UTR CCA 90 bp TCCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCACTTATGTTTGTCTATaGAGAGCTCAGTTCAAAGTG +
Preference number: 4 (lower is better)
Translates to: SPQLPQKRMCCFPSSLAFTYVCL*RAQFKV
Trigger: CACTTTGAACTGAGCTCTCCATAGACAAACATAAGT...GAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000667706.1
CDS-3UTR TCA 90 bp CTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAAATGCTACTAAAAGGCTGTATGTaGATGAGCTGCTTTGGCATC +
Preference number: 4 (lower is better)
Translates to: LPQKRMCCFPSSLAFKMLLKGCM*MSCFGI
Trigger: GATGCCAAAGCAGCTCATTCACATACAGCCTTTTAG...TAGCATTTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR TCA 90 bp TGTTATACCATTTACAAAATACCAAGGAGTCCACAGCTACCTAACACATTTACTTGGCTTCCTGCAGACTaGCTGGCTGCTGACCACTGC +
Preference number: 4 (lower is better)
Translates to: CYTIYKIPRSPQLPNTFTWLPAD*LAADHC
Trigger: GCAGTGGTCAGCAGCCAGTCAGTCTGCAGGAAGCCA...AGTAAATGTGTTAGGTAGCTGTGGACTCCTTGGTATTTTGTAAATGGTATAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR TCA 90 bp ATTGCTGTCAAGTCCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCTGGTGTTTAAATTaGCTGCTATTAGTAATAGGG +
Preference number: 4 (lower is better)
Translates to: IAVKSPQLPQKRMCCFPSSWCLN*LLLVIG
Trigger: CCCTATTACTAATAGCAGTCAATTTAAACACCAGGA...TGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGGACTTGACAGCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR TCA 90 bp CACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAAATATTGGCAAACTGATTaGCTGGAGAATGTTGTGGTG +
Preference number: 4 (lower is better)
Translates to: HSCHRNACAAFHHPLHSKYWQTD*LENVVV
Trigger: CACCACAACATTCTCCAGTCAATCAGTTTGCCAATA...TTTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR TCA 90 bp CACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAAAGAGGTATTGGCAAACTaGTTGACTGGAGAATGTTGT +
Preference number: 4 (lower is better)
Translates to: HSCHRNACAAFHHPLHSKEVLAN*LTGECC
Trigger: ACAACATTCTCCAGTCAATCAGTTTGCCAATACCTC...TTTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR TCA 90 bp AAGGAAATGGGACTACTGGGCTGTTCGCAGAGCAGCAACATAATATTAGTGCTTAGTGCCAGTTGCTGTTaGTGTTGCTGGTATTGTTCG +
Preference number: 4 (lower is better)
Translates to: KEMGLLGCSQSSNIILVLSASCC*CCWYCS
Trigger: CGAACAATACCAGCAACATCAACAGCAACTGGCACT...AAGCACTAATATTATGTTGCTGCTCTGCGAACAGCCCAGTAGTCCCATTTCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
CDS-3UTR TCA 90 bp CACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAAACATCATCCTTCATCTTaGATCCCATCAGTTGTTCTG +
Preference number: 4 (lower is better)
Translates to: HSCHRNACAAFHHPLHSKHHPSS*IPSVVL
Trigger: CAGAACAACTGATGGGATTCAAGATGAAGGATGATG...TTTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR TCA 90 bp TGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAAATGCTACCAGTGCTGGCTTTTCTaGTTCATGATTTTCCCTTGG +
Preference number: 4 (lower is better)
Translates to: CHRNACAAFHHPLHSKCYQCWLF*FMIFPW
Trigger: CCAAGGGAAAATCATGAATCAGAAAAGCCAGCACTG...GTAGCATTTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR GCA 90 bp CCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAAATGCTACTGCATTGGCTGTCTCTGTaGCATAACCTCAGACATGAT +
Preference number: 4 (lower is better)
Translates to: PQKRMCCFPSSLAFKMLLHWLSL*HNLRHD
Trigger: ATCATGTCTGAGGTTATGGCACAGAGACAGCCAATG...CAGTAGCATTTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR GCA 90 bp GTCCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTAGATCGGCTTTATCTTaGTTATTAACTTTGAACTCC +
Preference number: 4 (lower is better)
Translates to: VPTAATETHVLLSIIPCIRSALS*LLTLNS
Trigger: GGAGTTCAAAGTTAATAAGCAAGATAAAGCCGATCT...AATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR GCA 90 bp CCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAGATCGGCTTTATCTTaGTTATTAACTTTGAACTCC +
Preference number: 4 (lower is better)
Translates to: PHSCHRNACAAFHHPLHSRSALS*LLTLNS
Trigger: GGAGTTCAAAGTTAATAAGCAAGATAAAGCCGATCT...TGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR GCA 90 bp TGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAAATGCTACCTGTTTCTGCATGAGTaGCAGTTGCTGTTGATGTTG +
Preference number: 4 (lower is better)
Translates to: CHRNACAAFHHPLHSKCYLFLHE*QLLLML
Trigger: CAACATCAACAGCAACTGGCACTCATGCAGAAACAG...GTAGCATTTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR GCA 90 bp ACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAAATGCTACTGATGCAAGCTGCTGTTTCTaGATGAGTGCCAGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: TETHVLLSIIPCIQNATDASCCF*MSASCC
Trigger: ACAGCAACTGGCACTCATGCAGAAACAGCAGCTTGC...ATCAGTAGCATTTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR GCA 90 bp CAGTTAATCGAATGTTGTTCCCAATCAGAACCTGAGTTGTTGCAGAATTGGCAGGCAAGCTGCTGTTTCTaGATGAGTGCCAGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: QLIECCSQSEPELLQNWQASCCF*MSASCC
Trigger: ACAGCAACTGGCACTCATGCAGAAACAGCAGCTTGC...CTGCCAATTCTGCAACAACTCAGGTTCTGATTGGGAACAACATTCGATTAACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667706.1
CDS-3UTR GCA 90 bp TTGCTGTCAAGTCCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATACTTGTATGTACAAGTaGTGTTGGTGTAGTACTACT +
Preference number: 4 (lower is better)
Translates to: LLSSPHSCHRNACAAFHHTCMYK*CWCSTT
Trigger: AGTAGTACTACACCAACAGCACTTGTACATACAAGT...ATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGGACTTGACAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR GCA 90 bp ACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAAATCAGAACCTGAGTTGTTaGAGAATTGGCAGCAGTTAC +
Preference number: 4 (lower is better)
Translates to: TAATETHVLLSIIPCIQNQNLSC*RIGSSY
Trigger: GTAACTGCTGCCAATTCTGCAACAACTCAGGTTCTG...ATTTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR GCA 90 bp AACCTTAAGGATAATGTATGCCATTGGACTGGGCATTCAGACTTCGGTACTGACCAGAAACGCATGTGCTaGTTTCCATCATCCCTTGCA +
Preference number: 4 (lower is better)
Translates to: NLKDNVCHWTGHSDFGTDQKRMC*FPSSLA
Trigger: TGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTG...GTCAGTACCGAAGTCTGAATGCCCAGTCCAATGGCATACATTATCCTTAAGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
CDS-3UTR GCA 90 bp ATGAGCATTGCTGTCAAGTCCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTACGTACAGCAATTACTaGATTCTTCTCCCTTATATC +
Preference number: 4 (lower is better)
Translates to: MSIAVKSPQLPQKRMCCFTYSNY*ILLPYI
Trigger: GATATAAGGGAGAAGAATGCAGTAATTGCTGTACGT...AAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGGACTTGACAGCAATGCTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
CDS-3UTR GCA 90 bp GTGCTGAAAGTCAGTGCCCAACTAGACAATCTGAGCTACTACATACACTTGGCTTGTGCTGAAAGTCAGTaGCCAACTAGACAATCTGAG +
Preference number: 4 (lower is better)
Translates to: VLKVSAQLDNLSYYIHLACAESQ*PTRQSE
Trigger: CTCAGATTGTCTAGTTGGGCACTGACTTTCAGCACA...AGCCAAGTGTATGTAGTAGCTCAGATTGTCTAGTTGGGCACTGACTTTCAGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000469059.2
ENST00000480402.1
CDS-3UTR CCA 90 bp TTAAGGATAATGTATGCCATTGGACTGGGCATTCAGACTTCGGTACTGACAAAGGAGCCAGACAAAACCTaGGAGAGAGGTTCTTCGTCT +
Preference number: 4 (lower is better)
Translates to: LRIMYAIGLGIQTSVLTKEPDKT*ERGSSS
Trigger: AGACGAAGAACCTCTCTCCCAGGTTTTGTCTGGCTC...CTTTGTCAGTACCGAAGTCTGAATGCCCAGTCCAATGGCATACATTATCCTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
CDS-3UTR CCA 90 bp CACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAAAAATCCAATACACCTTTaGGGTACGGTGAGAGTAGTT +
Preference number: 4 (lower is better)
Translates to: HSCHRNACAAFHHPLHSKNPIHL*GTVRVV
Trigger: AACTACTCTCACCGTACCCCAAAGGTGTATTGGATT...TTTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR CCA 90 bp CACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAAAGAGTTGTTGCAGAATTaGCAGCAGTTACTTGATGAC +
Preference number: 4 (lower is better)
Translates to: HSCHRNACAAFHHPLHSKELLQN*QQLLDD
Trigger: GTCATCAAGTAACTGCTGCCAATTCTGCAACAACTC...TTTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR CCA 90 bp AAGCTACGTCACCTCCATCGCTACTGTGTTGTCTGCTATGTTGTTCAGTGCTGGCCTGTGATGTGTTGGTaGAGGAATTACTATTTGCTT +
Preference number: 4 (lower is better)
Translates to: KLRHLHRYCVVCYVVQCWPVMCW*RNYYLL
Trigger: AAGCAAATAGTAATTCCTCCACCAACACATCACAGG...CCAGCACTGAACAACATAGCAGACAACACAGTAGCGATGGAGGTGACGTAGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667706.1
CDS-3UTR CCA 90 bp GAGCAGCAACATAATATTAGTGCTTTAAGTACCAGAAACCACCCACAGCTTTGTAGGAAATGGGACTACTaGGCTGTTCGCAGAGCAGCA +
Preference number: 4 (lower is better)
Translates to: EQQHNISALSTRNHPQLCRKWDY*AVRRAA
Trigger: TGCTGCTCTGCGAACAGCCCAGTAGTCCCATTTCCT...ACAAAGCTGTGGGTGGTTTCTGGTACTTAAAGCACTAATATTATGTTGCTGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
CDS-3UTR CCA 90 bp TACACAGAAAACTCAAGGACCCAGAGGGGAACCAAGTTATGTTATACCATTTACTGGTGTGGAAGGAAATaGGACTACTGGGCTGTTCGC +
Preference number: 4 (lower is better)
Translates to: YTENSRTQRGTKLCYTIYWCGRK*DYWAVR
Trigger: GCGAACAGCCCAGTAGTCCCATTTCCTTCCACACCA...GTAAATGGTATAACATAACTTGGTTCCCCTCTGGGTCCTTGAGTTTTCTGTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
CDS-3UTR CCA 90 bp GATACACAGAAAACTCAAGGACCCAGAGGGGAACCAAGTTATGTTATACCATTTTGGTGTGGAAGGAAATaGGACTACTGGGCTGTTCGC +
Preference number: 4 (lower is better)
Translates to: DTQKTQGPRGEPSYVIPFWCGRK*DYWAVR
Trigger: GCGAACAGCCCAGTAGTCCCATTTCCTTCCACACCA...AAATGGTATAACATAACTTGGTTCCCCTCTGGGTCCTTGAGTTTTCTGTGTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
CDS-3UTR CCA 90 bp GCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAAATGCTGGCCTTGCAGCCTTCTaGAGAATCTTAAAAGGAAAA +
Preference number: 4 (lower is better)
Translates to: AATETHVLLSIIPCIQNAGLAAF*RILKGK
Trigger: TTTTCCTTTTAAGATTCTCCAGAAGGCTGCAAGGCC...AGCATTTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
CDS-3UTR CCA 90 bp GCTGAAAGTCAGTGCCCAACTAGACAATCTGAGCTACTACATACACTTGGCTTAAATCCACGCGACTCCTaGACTTCCTTGAACTGTCAA +
Preference number: 4 (lower is better)
Translates to: AESQCPTRQSELLHTLGLNPRDS*TSLNCQ
Trigger: TTGACAGTTCAAGGAAGTCCAGGAGTCGCGTGGATT...TAAGCCAAGTGTATGTAGTAGCTCAGATTGTCTAGTTGGGCACTGACTTTCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000469059.2
ENST00000480402.1
3UTR CAA 72 bp AGAGGTCAAATATTTCCAAAGGAAGGCACCCGATATTaGTGGTTCTGGCCTTGCAGCCTTCTGGAGAATCTT +
Preference number: 4 (lower is better)
Translates to: RGQIFPKEGTRY*WFWPCSLLENL
Trigger: AAGATTCTCCAGAAGGCTGCAAGGCCAGAACCACAAATATCGGGTGCCTTCCTTTGGAAATATTTGACCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
CDS-3UTR TCA 90 bp AAGCTACGTCACCTCCATCGCTACTGTGTTGTCTGCTATGTTGTTCAGTGCTGGTCCTGGTGTTTAAATTaGCTGCTATTAGTAATAGGG +
Preference number: 4 (lower is better)
Translates to: KLRHLHRYCVVCYVVQCWSWCLN*LLLVIG
Trigger: CCCTATTACTAATAGCAGTCAATTTAAACACCAGGA...CCAGCACTGAACAACATAGCAGACAACACAGTAGCGATGGAGGTGACGTAGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667706.1
CDS-3UTR TCA 90 bp GCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAAATGCTCTGGGAAAGTCATACTaGTTCAGATCTTTAGCATTG +
Preference number: 4 (lower is better)
Translates to: AATETHVLLSIIPCIQNALGKSY*FRSLAL
Trigger: CAATGCTAAAGATCTGAATCAGTATGACTTTCCCAG...AGCATTTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR TCA 90 bp TTCACAGAAGAGAGGTCAAATATTTCCAAAGGAAGGCACCCGATATTTGTGGTTGAGAGGTTCTTCGTCTaGGCTGGGAAAGTCATACTG +
Preference number: 4 (lower is better)
Translates to: FTEERSNISKGRHPIFVVERFFV*AGKVIL
Trigger: CAGTATGACTTTCCCAGCTCAGACGAAGAACCTCTC...AACCACAAATATCGGGTGCCTTCCTTTGGAAATATTTGACCTCTCTTCTGTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
CDS-3UTR TCA 90 bp TTAAGGATAATGTATGCCATTGGACTGGGCATTCAGACTTCGGTACTGACAAAGTCCCATCAGTTGTTCTaGTGTCACCAAAGCAGAAGC +
Preference number: 4 (lower is better)
Translates to: LRIMYAIGLGIQTSVLTKSHQLF*CHQSRS
Trigger: GCTTCTGCTTTGGTGACATCAGAACAACTGATGGGA...CTTTGTCAGTACCGAAGTCTGAATGCCCAGTCCAATGGCATACATTATCCTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
CDS-3UTR TCA 90 bp GTTACTTGTCCTAATGATAGTAGACCAGGAAGATCCCCATTTAATAGTACATTCGCCCTTGTATACTCCTaGGGCTGGAAGGACGCCATT +
Preference number: 4 (lower is better)
Translates to: VTCPNDSRPGRSPFNSTFALVYS*GWKDAI
Trigger: AATGGCGTCCTTCCAGCCTCAGGAGTATACAAGGGC...GAATGTACTATTAAATGGGGATCTTCCTGGTCTACTATCATTAGGACAAGTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
CDS-3UTR TCA 90 bp TATACCATTTACAAAATACCAAGGAGTCCACAGCTACCTAACACATTTACTACAGGGACCTTGGAAACTTaGCAGTTTGCTGCAGCGGCC +
Preference number: 4 (lower is better)
Translates to: YTIYKIPRSPQLPNTFTTGTLET*QFAAAA
Trigger: GGCCGCTGCAGCAAACTGTCAAGTTTCCAAGGTCCC...TGTAGTAAATGTGTTAGGTAGCTGTGGACTCCTTGGTATTTTGTAAATGGTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR TCA 90 bp GAAGGCTGTAACAAAGCTGAACCTGCCGTTGATGGACTTGTATGTACAAGTGCTAGAAACAAAACCCTGTaGTGTGTTGGTGGAGGAATT +
Preference number: 4 (lower is better)
Translates to: EGCNKAEPAVDGLVCTSARNKTL*CVGGGI
Trigger: AATTCCTCCACCAACACATCACAGGGTTTTGTTTCT...AGCACTTGTACATACAAGTCCATCAACGGCAGGTTCAGCTTTGTTACAGCCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000667706.1
CDS-3UTR TCA 90 bp AAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAAATGCTACTGATGCATTTGAAGCATGAGAGATaGGCATTGCTGTCAAGTCCC +
Preference number: 4 (lower is better)
Translates to: KRMCCFPSSLAFKMLLMHLKHER*ALLSSP
Trigger: GGGACTTGACAGCAATGCTCATCTCTCATGCTTCAA...ATGCATCAGTAGCATTTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR TCA 90 bp GCTGAAAGTCAGTGCCCAACTAGACAATCTGAGCTACTACATACACTTGGCTTAAGAGGTAGTGTCTCATaGGACAATGTGCTGAAAGTC +
Preference number: 4 (lower is better)
Translates to: AESQCPTRQSELLHTLGLRGSVS*DNVLKV
Trigger: GACTTTCAGCACATTGTCTCATGAGACACTACCTCT...TAAGCCAAGTGTATGTAGTAGCTCAGATTGTCTAGTTGGGCACTGACTTTCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000469059.2
ENST00000480402.1
CDS-3UTR GCA 90 bp AAAGTCAGTGCCCAACTAGACAATCTGAGCTACTACATACACTTGGCTTATCTGATTAAAACTCCACTGTaGGCTCTTCAGCCAACCCCA +
Preference number: 4 (lower is better)
Translates to: KVSAQLDNLSYYIHLAYLIKTPL*ALQPTP
Trigger: TGGGGTTGGCTGAAGAGCGCACAGTGGAGTTTTAAT...CAGATAAGCCAAGTGTATGTAGTAGCTCAGATTGTCTAGTTGGGCACTGACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480402.1
CDS-3UTR GCA 90 bp AGAAGCAGCAAACTGTGCACTAGCAGAATCCAAAGTCTTAGAAACAAAACCCTGATTAAAACTCCACTGTaGGCTCTTCAGCCAACCCCA +
Preference number: 4 (lower is better)
Translates to: RSSKLCTSRIQSLRNKTLIKTPL*ALQPTP
Trigger: TGGGGTTGGCTGAAGAGCGCACAGTGGAGTTTTAAT...CAGGGTTTTGTTTCTAAGACTTTGGATTCTGCTAGTGCACAGTTTGCTGCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000667706.1
CDS-3UTR GCA 90 bp AACTCAAGGACCCAGAGGGGAACCAAGTTATGTTATACCATTTACAAAATACCACTGGCTGCTGACCACTaGCTTTTTCTAGGCGGTCAA +
Preference number: 4 (lower is better)
Translates to: NSRTQRGTKLCYTIYKIPLAADH*LFLGGQ
Trigger: TTGACCGCCTAGAAAAAGGCAGTGGTCAGCAGCCAG...TGGTATTTTGTAAATGGTATAACATAACTTGGTTCCCCTCTGGGTCCTTGAGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR GCA 90 bp CCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAAATGCTACTGCATAAGGATCATTTGTaGTGGAACCATCTCGCTTCT +
Preference number: 4 (lower is better)
Translates to: PQKRMCCFPSSLAFKMLLHKDHL*WNHLAS
Trigger: AGAAGCGAGATGGTTCCAGCACAAATGATCCTTATG...CAGTAGCATTTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR GCA 90 bp CTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAAATGCTAATAGTACTGACAGCCTaGTTTCCTACGGAAAGCAAA +
Preference number: 4 (lower is better)
Translates to: LPQKRMCCFPSSLAFKMLIVLTA*FPTESK
Trigger: TTTGCTTTCCGTAGGAAAGCAGGCTGTCAGTACTAT...TAGCATTTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR GCA 90 bp CCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAAATGCTACTGATAGTACTGACAGCCTaGTTTCCTACGGAAAGCAAA +
Preference number: 4 (lower is better)
Translates to: PQKRMCCFPSSLAFKMLLIVLTA*FPTESK
Trigger: TTTGCTTTCCGTAGGAAAGCAGGCTGTCAGTACTAT...CAGTAGCATTTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR GCA 90 bp TCAAGGACCCAGAGGGGAACCAAGTTATGTTATACCATTTACAAAATACCAAGGCTGGGTCCCAGGTTGTaGTGTTCCTGTTCGGTTTAT +
Preference number: 4 (lower is better)
Translates to: SRTQRGTKLCYTIYKIPRLGPRL*CSCSVY
Trigger: ATAAACCGAACAGGAACAGCACAACCTGGGACCCAG...CCTTGGTATTTTGTAAATGGTATAACATAACTTGGTTCCCCTCTGGGTCCTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR GCA 90 bp CCACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAAACTTGTATGTACAAGTaGTGTTGGTGTAGTACTACT +
Preference number: 4 (lower is better)
Translates to: PQLPQKRMCCFPSSLAFKTCMYK*CWCSTT
Trigger: AGTAGTACTACACCAACAGCACTTGTACATACAAGT...TTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR GCA 90 bp GCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAAATGCTCCTAGGTATATGTCGTaGATTTATTGGGGCAATAGA +
Preference number: 4 (lower is better)
Translates to: AATETHVLLSIIPCIQNAPRYMS*IYWGNR
Trigger: TCTATTGCCCCAATAAATGCACGACATATACCTAGG...AGCATTTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR GCA 90 bp GTTACTTGTCCTAATGATAGTAGACCAGGAAGATCCCCATTTAATAGTACATTCATCAAGTCCCCAGGCTaGAGTTCCACTCGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: VTCPNDSRPGRSPFNSTFIKSPG*SSTRRK
Trigger: CTTCCTCCGAGTGGAACTGCAGCCTGGGGACTTGAT...GAATGTACTATTAAATGGGGATCTTCCTGGTCTACTATCATTAGGACAAGTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
CDS-3UTR GCA 90 bp TGTGCTGAAAGTCAGTGCCCAACTAGACAATCTGAGCTACTACATACACTTGGCGAACTGTCAATACACTaGACCCTGTTTAAATGGCTG +
Preference number: 4 (lower is better)
Translates to: CAESQCPTRQSELLHTLGELSIH*TLFKWL
Trigger: CAGCCATTTAAACAGGGTGCAGTGTATTGACAGTTC...GCCAAGTGTATGTAGTAGCTCAGATTGTCTAGTTGGGCACTGACTTTCAGCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000469059.2
ENST00000480402.1
CDS-3UTR CCA 90 bp TGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAAATGCTACAAGGATCATTTGTGCTaGAACCATCTCGCTTCTCTT +
Preference number: 4 (lower is better)
Translates to: CHRNACAAFHHPLHSKCYKDHLC*NHLASL
Trigger: AAGAGAAGCGAGATGGTTCCAGCACAAATGATCCTT...GTAGCATTTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR CCA 90 bp ATGAGCATTGCTGTCAAGTCCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTGCTGTTTTTAGAAACTaGAATGATGATACACGTACA +
Preference number: 4 (lower is better)
Translates to: MSIAVKSPQLPQKRMCCFAVFRN*NDDTRT
Trigger: TGTACGTGTATCATCATTCCAGTTTCTAAAAACAGC...AAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGGACTTGACAGCAATGCTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
CDS-3UTR CCA 90 bp TTAAGGATAATGTATGCCATTGGACTGGGCATTCAGACTTCGGTACTGACAAAGTGTATGCCATTGGACTaGGCATTCAGACTTCGGTAC +
Preference number: 4 (lower is better)
Translates to: LRIMYAIGLGIQTSVLTKCMPLD*AFRLRY
Trigger: GTACCGAAGTCTGAATGCCCAGTCCAATGGCATACA...CTTTGTCAGTACCGAAGTCTGAATGCCCAGTCCAATGGCATACATTATCCTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
CDS-3UTR TCA 90 bp CTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAAATGCTACTGGGAAAGTCATACTaGTTCAGATCTTTAGCATTG +
Preference number: 4 (lower is better)
Translates to: LPQKRMCCFPSSLAFKMLLGKSY*FRSLAL
Trigger: CAATGCTAAAGATCTGAATCAGTATGACTTTCCCAG...TAGCATTTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR TCA 90 bp TGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAAATGCTACCTGGGAAAGTCATACTaGTTCAGATCTTTAGCATTG +
Preference number: 4 (lower is better)
Translates to: CHRNACAAFHHPLHSKCYLGKSY*FRSLAL
Trigger: CAATGCTAAAGATCTGAATCAGTATGACTTTCCCAG...GTAGCATTTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR TCA 90 bp AAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAAATGCTACTGATGCATAGATGCAAGGTTCTGTaGTGTGTTGGTGGAGGAATT +
Preference number: 4 (lower is better)
Translates to: KRMCCFPSSLAFKMLLMHRCKVL*CVGGGI
Trigger: AATTCCTCCACCAACACATCACAGAACCTTGCATCT...ATGCATCAGTAGCATTTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263062.8
CDS-3UTR TCA 90 bp TTCACAGAAGAGAGGTCAAATATTTCCAAAGGAAGGCACCCGATATTTGTGGTTTCCCATCAGTTGTTCTaGTGTCACCAAAGCAGAAGC +
Preference number: 4 (lower is better)
Translates to: FTEERSNISKGRHPIFVVSHQLF*CHQSRS
Trigger: GCTTCTGCTTTGGTGACATCAGAACAACTGATGGGA...AACCACAAATATCGGGTGCCTTCCTTTGGAAATATTTGACCTCTCTTCTGTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
CDS-3UTR TCA 90 bp CAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAAATGCTACTGATGCATCATCCTTCATCTTaGATCCCATCAGTTGTTCTG +
Preference number: 4 (lower is better)
Translates to: QKRMCCFPSSLAFKMLLMHHPSS*IPSVVL
Trigger: CAGAACAACTGATGGGATTCAAGATGAAGGATGATG...CATCAGTAGCATTTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR TCA 90 bp CCTGTGATGTGTTGGTGGAGGAATTACTATTTGCTTGCTGTTGCTGAATTTGTGTTCCCAATCAGAACCTaGGTTGTTGCAGAATTGGCA +
Preference number: 4 (lower is better)
Translates to: PVMCWWRNYYLLAVAEFVFPIRT*VVAELA
Trigger: TGCCAATTCTGCAACAACTCAGGTTCTGATTGGGAA...CACAAATTCAGCAACAGCAAGCAAATAGTAATTCCTCCACCAACACATCACAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667706.1
CDS-3UTR TCA 90 bp CCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAAATGCTACTGGGCTTTTCTGATTCATaGTTTTCCCTTGGAACTGAA +
Preference number: 4 (lower is better)
Translates to: PQKRMCCFPSSLAFKMLLGFSDS*FSLGTE
Trigger: TTCAGTTCCAAGGGAAAATCATGAATCAGAAAAGCC...CAGTAGCATTTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR TCA 90 bp ACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAAATGCTACTGATCAGTGCTGGCTTTTCTaGTTCATGATTTTCCCTTGG +
Preference number: 4 (lower is better)
Translates to: TETHVLLSIIPCIQNATDQCWLF*FMIFPW
Trigger: CCAAGGGAAAATCATGAATCAGAAAAGCCAGCACTG...ATCAGTAGCATTTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR TCA 90 bp GCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAAATGCTCATTCAAAATGCTACTaGTGCATAGCACCTAATCAA +
Preference number: 4 (lower is better)
Translates to: AATETHVLLSIIPCIQNAHSKCY*CIAPNQ
Trigger: TTGATTAGGTGCTATGCATCAGTAGCATTTTGAATG...AGCATTTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR TCA 90 bp CAGAATTGGCAGCAGTTACTTGATGACTCAGTGCACTGTGGGAACTTGAAGTCTAGAAAAATTGAAGCATaGGAGATGAGCATTGCTGTC +
Preference number: 4 (lower is better)
Translates to: QNWQQLLDDSVHCGNLKSRKIEA*EMSIAV
Trigger: GACAGCAATGCTCATCTCTCATGCTTCAATTTTTCT...AGACTTCAAGTTCCCACAGTGCACTGAGTCATCAAGTAACTGCTGCCAATTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000667706.1
CDS-3UTR TCA 90 bp GAGCAGCAACATAATATTAGTGCTTTAAGTACCAGAAACCACCCACAGCTTTGTTCCGCACCATGCACATaGTGTGATGACACTTCATCT +
Preference number: 4 (lower is better)
Translates to: EQQHNISALSTRNHPQLCSAPCT*CDDTSS
Trigger: AGATGAAGTGTCATCACATCATGTGCATGGTGCGGA...ACAAAGCTGTGGGTGGTTTCTGGTACTTAAAGCACTAATATTATGTTGCTGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
CDS-3UTR TCA 90 bp GTTCCCAATCAGAACCTGAGTTGTTGCAGAATTGGCAGCAGTTACTTGATGACTCAGCACAGGAACCAATaGAGGTACAGTGTACAAAAA +
Preference number: 4 (lower is better)
Translates to: VPNQNLSCCRIGSSYLMTQHRNQ*RYSVQK
Trigger: TTTTTGTACACTGTACCTTCATTGGTTCCTGTGCTG...AGTCATCAAGTAACTGCTGCCAATTCTGCAACAACTCAGGTTCTGATTGGGAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667706.1
CDS-3UTR TCA 90 bp AACCTTAAGGATAATGTATGCCATTGGACTGGGCATTCAGACTTCGGTACTGACTTCAGACTTCGGTACTaGCAAAGCACTAGTAGTAGT +
Preference number: 4 (lower is better)
Translates to: NLKDNVCHWTGHSDFGTDFRLRY*QSTSSS
Trigger: ACTACTACTAGTGCTTTGTCAGTACCGAAGTCTGAA...GTCAGTACCGAAGTCTGAATGCCCAGTCCAATGGCATACATTATCCTTAAGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
CDS-3UTR TCA 90 bp AAAGTCAGTGCCCAACTAGACAATCTGAGCTACTACATACACTTGGCTTATCTGAGAGGTAGTGTCTCATaGGACAATGTGCTGAAAGTC +
Preference number: 4 (lower is better)
Translates to: KVSAQLDNLSYYIHLAYLRGSVS*DNVLKV
Trigger: GACTTTCAGCACATTGTCTCATGAGACACTACCTCT...CAGATAAGCCAAGTGTATGTAGTAGCTCAGATTGTCTAGTTGGGCACTGACTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000469059.2
ENST00000480402.1
CDS-3UTR TCA 90 bp GCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAAATGCTATTTACTGTACAGAATaGTGTCTGAGGAAAGACACT +
Preference number: 4 (lower is better)
Translates to: AATETHVLLSIIPCIQNAIYCTE*CLRKDT
Trigger: AGTGTCTTTCCTCAGACATCATTCTGTACAGTAAAT...AGCATTTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000667706.1
CDS-3UTR GCA 90 bp TGGCTGTTTTTAGAAACTGGAATGATGATACACGTACAGCAATTACTGCATTCTTTCTCGCCATACACCTaGTGTGCTGAAATAGCCCGC +
Preference number: 4 (lower is better)
Translates to: WLFLETGMMIHVQQLLHSFSPYT*CAEIAR
Trigger: GCGGGCTATTTCAGCACAGCAGGTGTATGGCGAGAA...AGAATGCAGTAATTGCTGTACGTGTATCATCATTCCAGTTTCTAAAAACAGCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
CDS-3UTR GCA 90 bp AACCTTAAGGATAATGTATGCCATTGGACTGGGCATTCAGACTTCGGTACTGACAGCAATATTACTTTCTaGCTCTGGGACCGGTATAAC +
Preference number: 4 (lower is better)
Translates to: NLKDNVCHWTGHSDFGTDSNITF*LWDRYN
Trigger: GTTATACCGGTCCCAGAGGCAGAAAGTAATATTGCT...GTCAGTACCGAAGTCTGAATGCCCAGTCCAATGGCATACATTATCCTTAAGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
CDS-3UTR GCA 90 bp AAGGAAATGGGACTACTGGGCTGTTCGCAGAGCAGCAACATAATATTAGTGCTTCATAAGGATCATTTGTaGTGGAACCATCTCGCTTCT +
Preference number: 4 (lower is better)
Translates to: KEMGLLGCSQSSNIILVLHKDHL*WNHLAS
Trigger: AGAAGCGAGATGGTTCCAGCACAAATGATCCTTATG...AAGCACTAATATTATGTTGCTGCTCTGCGAACAGCCCAGTAGTCCCATTTCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
CDS-3UTR GCA 90 bp AACTCAAGGACCCAGAGGGGAACCAAGTTATGTTATACCATTTACAAAATACCAGCAAGCTGCTGTTTCTaGATGAGTGCCAGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: NSRTQRGTKLCYTIYKIPASCCF*MSASCC
Trigger: ACAGCAACTGGCACTCATGCAGAAACAGCAGCTTGC...TGGTATTTTGTAAATGGTATAACATAACTTGGTTCCCCTCTGGGTCCTTGAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR GCA 90 bp AAGGAAATGGGACTACTGGGCTGTTCGCAGAGCAGCAACATAATATTAGTGCTTAGAAGCAGCAAACTGTaGACTAGCAGAATCCAAAGT +
Preference number: 4 (lower is better)
Translates to: KEMGLLGCSQSSNIILVLRSSKL*TSRIQS
Trigger: ACTTTGGATTCTGCTAGTGCACAGTTTGCTGCTTCT...AAGCACTAATATTATGTTGCTGCTCTGCGAACAGCCCAGTAGTCCCATTTCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
CDS-3UTR GCA 90 bp GCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAAATGCTACTTGTATGTACAAGTaGTGTTGGTGTAGTACTACT +
Preference number: 4 (lower is better)
Translates to: AATETHVLLSIIPCIQNATCMYK*CWCSTT
Trigger: AGTAGTACTACACCAACAGCACTTGTACATACAAGT...AGCATTTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR GCA 90 bp CATGCACATGATGTGATGACACTTCATCTCTATACAATCTCACATCTCACACTCTTGTGGTTCTGGCCTTaGAGCCTTCTGGAGAATCTT +
Preference number: 4 (lower is better)
Translates to: HAHDVMTLHLYTISHLTLLWFWP*SLLENL
Trigger: AAGATTCTCCAGAAGGCTGCAAGGCCAGAACCACAA...GAGTGTGAGATGTGAGATTGTATAGAGATGAAGTGTCATCACATCATGTGCATG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
CDS-3UTR GCA 90 bp CAATGTGCTGAAAGTCAGTGCCCAACTAGACAATCTGAGCTACTACATACACTTTGTGCTGAAAGTCAGTaGCCAACTAGACAATCTGAG +
Preference number: 4 (lower is better)
Translates to: QCAESQCPTRQSELLHTLCAESQ*PTRQSE
Trigger: CTCAGATTGTCTAGTTGGGCACTGACTTTCAGCACA...AAGTGTATGTAGTAGCTCAGATTGTCTAGTTGGGCACTGACTTTCAGCACATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000469059.2
ENST00000480402.1
CDS-3UTR CCA 90 bp CCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAAATGCTACTGATAAGTAGGTTTCATTaGCTGTCTCTGTGCCATAAC +
Preference number: 4 (lower is better)
Translates to: PQKRMCCFPSSLAFKMLLISRFH*LSLCHN
Trigger: GTTATGGCACAGAGACAGCCAATGAAACCTACTTAT...CAGTAGCATTTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR CCA 90 bp TGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAAATGCTACATAAGTAGGTTTCATTaGCTGTCTCTGTGCCATAAC +
Preference number: 4 (lower is better)
Translates to: CHRNACAAFHHPLHSKCYISRFH*LSLCHN
Trigger: GTTATGGCACAGAGACAGCCAATGAAACCTACTTAT...GTAGCATTTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR CCA 90 bp GAGCAGCAACATAATATTAGTGCTTTAAGTACCAGAAACCACCCACAGCTTTGTTTTAGCATTGAAGACTaGCAGTGCAGCAGGACTCGT +
Preference number: 4 (lower is better)
Translates to: EQQHNISALSTRNHPQLCFSIED*QCSRTR
Trigger: ACGAGTCCTGCTGCACTGCCAGTCTTCAATGCTAAA...ACAAAGCTGTGGGTGGTTTCTGGTACTTAAAGCACTAATATTATGTTGCTGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
CDS-3UTR CCA 90 bp GCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAAATGCTTCTGTGATGTGTTGGTaGAGGAATTACTATTTGCTT +
Preference number: 4 (lower is better)
Translates to: AATETHVLLSIIPCIQNASVMCW*RNYYLL
Trigger: AAGCAAATAGTAATTCCTCCACCAACACATCACAGA...AGCATTTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263062.8
CDS-3UTR CCA 90 bp AAGGAAATGGGACTACTGGGCTGTTCGCAGAGCAGCAACATAATATTAGTGCTTGAGTTGTTGCAGAATTaGCAGCAGTTACTTGATGAC +
Preference number: 4 (lower is better)
Translates to: KEMGLLGCSQSSNIILVLELLQN*QQLLDD
Trigger: GTCATCAAGTAACTGCTGCCAATTCTGCAACAACTC...AAGCACTAATATTATGTTGCTGCTCTGCGAACAGCCCAGTAGTCCCATTTCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
CDS-3UTR CCA 90 bp AAGGAAATGGGACTACTGGGCTGTTCGCAGAGCAGCAACATAATATTAGTGCTTATGAAGATGGGACCTTaGAAACTTGACAGTTTGCTG +
Preference number: 4 (lower is better)
Translates to: KEMGLLGCSQSSNIILVLMKMGP*KLDSLL
Trigger: CAGCAAACTGTCAAGTTTCCAAGGTCCCATCTTCAT...AAGCACTAATATTATGTTGCTGCTCTGCGAACAGCCCAGTAGTCCCATTTCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
CDS-3UTR CCA 90 bp AATGATGATACACGTACAGCAATTACTGCATTCTTCTCCCTTATATCCTTTTCGCCACCCACAGCTTTGTaGGCAAGTTGGGGATGGAAA +
Preference number: 4 (lower is better)
Translates to: NDDTRTAITAFFSLISFSPPTAL*ASWGWK
Trigger: TTTCCATCCCCAACTTGCCCACAAAGCTGTGGGTGG...CGAAAAGGATATAAGGGAGAAGAATGCAGTAATTGCTGTACGTGTATCATCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
CDS-3UTR CCA 90 bp TGGCTGTTTTTAGAAACTGGAATGATGATACACGTACAGCAATTACTGCATTCTGGCACCCGATATTTGTaGTTCTGGCCTTGCAGCCTT +
Preference number: 4 (lower is better)
Translates to: WLFLETGMMIHVQQLLHSGTRYL*FWPCSL
Trigger: AAGGCTGCAAGGCCAGAACCACAAATATCGGGTGCC...AGAATGCAGTAATTGCTGTACGTGTATCATCATTCCAGTTTCTAAAAACAGCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
CDS-3UTR CCA 90 bp AGTGCTTTAAGTACCAGAAACCACCCACAGCTTTGTGGGCAAGTTGGGGATGGACAACATGTAATGCCCTaGGTTTATTTTGTGAGAATT +
Preference number: 4 (lower is better)
Translates to: SALSTRNHPQLCGQVGDGQHVMP*VYFVRI
Trigger: AATTCTCACAAAATAAACCCAGGGCATTACATGTTG...TCCATCCCCAACTTGCCCACAAAGCTGTGGGTGGTTTCTGGTACTTAAAGCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
CDS-3UTR CCA 90 bp TGTTATACCATTTACAAAATACCAAGGAGTCCACAGCTACCTAACACATTTACTTTCTTCCATGATCGGTaGCCGAATGGGGTGGCTTCC +
Preference number: 4 (lower is better)
Translates to: CYTIYKIPRSPQLPNTFTFFHDR*PNGVAS
Trigger: GGAAGCCACCCCATTCGGCCACCGATCATGGAAGAA...AGTAAATGTGTTAGGTAGCTGTGGACTCCTTGGTATTTTGTAAATGGTATAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375110.6
CDS-3UTR TCA 90 bp TCAAGGACCCAGAGGGGAACCAAGTTATGTTATACCATTTACAAAATACCAAGGCTAAAAGGCTGTATGTaGATGAGCTGCTTTGGCATC +
Preference number: 4 (lower is better)
Translates to: SRTQRGTKLCYTIYKIPRLKGCM*MSCFGI
Trigger: GATGCCAAAGCAGCTCATTCACATACAGCCTTTTAG...CCTTGGTATTTTGTAAATGGTATAACATAACTTGGTTCCCCTCTGGGTCCTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR TCA 90 bp AGAAGCAGCAAACTGTGCACTAGCAGAATCCAAAGTCTTAGAAACAAAACCCTGTATTGGCAAACTGATTaGCTGGAGAATGTTGTGGTG +
Preference number: 4 (lower is better)
Translates to: RSSKLCTSRIQSLRNKTLYWQTD*LENVVV
Trigger: CACCACAACATTCTCCAGTCAATCAGTTTGCCAATA...CAGGGTTTTGTTTCTAAGACTTTGGATTCTGCTAGTGCACAGTTTGCTGCTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000667706.1
CDS-3UTR TCA 90 bp ACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAAATGCTACTGATCATCATCCTTCATCTTaGATCCCATCAGTTGTTCTG +
Preference number: 4 (lower is better)
Translates to: TETHVLLSIIPCIQNATDHHPSS*IPSVVL
Trigger: CAGAACAACTGATGGGATTCAAGATGAAGGATGATG...ATCAGTAGCATTTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR TCA 90 bp GTTCCCAATCAGAACCTGAGTTGTTGCAGAATTGGCAGCAGTTACTTGATGACTGGCTTTTCTGATTCATaGTTTTCCCTTGGAACTGAA +
Preference number: 4 (lower is better)
Translates to: VPNQNLSCCRIGSSYLMTGFSDS*FSLGTE
Trigger: TTCAGTTCCAAGGGAAAATCATGAATCAGAAAAGCC...AGTCATCAAGTAACTGCTGCCAATTCTGCAACAACTCAGGTTCTGATTGGGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000667706.1
CDS-3UTR TCA 90 bp AACTCAAGGACCCAGAGGGGAACCAAGTTATGTTATACCATTTACAAAATACCATTGAAGCATGAGAGATaGGCATTGCTGTCAAGTCCC +
Preference number: 4 (lower is better)
Translates to: NSRTQRGTKLCYTIYKIPLKHER*ALLSSP
Trigger: GGGACTTGACAGCAATGCTCATCTCTCATGCTTCAA...TGGTATTTTGTAAATGGTATAACATAACTTGGTTCCCCTCTGGGTCCTTGAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR TCA 90 bp CAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAAATGCTACTGATGAGAAAAATTGAAGCATaGGAGATGAGCATTGCTGTC +
Preference number: 4 (lower is better)
Translates to: QKRMCCFPSSLAFKMLLMRKIEA*EMSIAV
Trigger: GACAGCAATGCTCATCTCTCATGCTTCAATTTTTCT...CATCAGTAGCATTTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR GCA 90 bp CCTGTGATGTGTTGGTGGAGGAATTACTATTTGCTTGCTGTTGCTGAATTTGTGAGCAATATTACTTTCTaGCTCTGGGACCGGTATAAC +
Preference number: 4 (lower is better)
Translates to: PVMCWWRNYYLLAVAEFVSNITF*LWDRYN
Trigger: GTTATACCGGTCCCAGAGGCAGAAAGTAATATTGCT...CACAAATTCAGCAACAGCAAGCAAATAGTAATTCCTCCACCAACACATCACAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667706.1
CDS-3UTR GCA 90 bp TTAAGGATAATGTATGCCATTGGACTGGGCATTCAGACTTCGGTACTGACAAAGCATAAGGATCATTTGTaGTGGAACCATCTCGCTTCT +
Preference number: 4 (lower is better)
Translates to: LRIMYAIGLGIQTSVLTKHKDHL*WNHLAS
Trigger: AGAAGCGAGATGGTTCCAGCACAAATGATCCTTATG...CTTTGTCAGTACCGAAGTCTGAATGCCCAGTCCAATGGCATACATTATCCTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
CDS-3UTR GCA 90 bp AAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAAATGCTACTGATGCATAGAAGCAGCAAACTGTaGACTAGCAGAATCCAAAGT +
Preference number: 4 (lower is better)
Translates to: KRMCCFPSSLAFKMLLMHRSSKL*TSRIQS
Trigger: ACTTTGGATTCTGCTAGTGCACAGTTTGCTGCTTCT...ATGCATCAGTAGCATTTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR GCA 90 bp CAGAATTGGCAGCAGTTACTTGATGACTCAGTGCACTGTGGGAACTTGAAGTCTACTTGTATGTACAAGTaGTGTTGGTGTAGTACTACT +
Preference number: 4 (lower is better)
Translates to: QNWQQLLDDSVHCGNLKSTCMYK*CWCSTT
Trigger: AGTAGTACTACACCAACAGCACTTGTACATACAAGT...AGACTTCAAGTTCCCACAGTGCACTGAGTCATCAAGTAACTGCTGCCAATTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667706.1
CDS-3UTR GCA 90 bp TTTACAAAATACCAAGGAGTCCACAGCTACCTAACACATTTACTACAGCACAGGCAGAACCTGAGTTGTTaGAGAATTGGCAGCAGTTAC +
Preference number: 4 (lower is better)
Translates to: FTKYQGVHSYLTHLLQHRQNLSC*RIGSSY
Trigger: GTAACTGCTGCCAATTCTGCAACAACTCAGGTTCTG...CCTGTGCTGTAGTAAATGTGTTAGGTAGCTGTGGACTCCTTGGTATTTTGTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR GCA 90 bp AAGGAAATGGGACTACTGGGCTGTTCGCAGAGCAGCAACATAATATTAGTGCTTCCTAGGTATATGTCGTaGATTTATTGGGGCAATAGA +
Preference number: 4 (lower is better)
Translates to: KEMGLLGCSQSSNIILVLPRYMS*IYWGNR
Trigger: TCTATTGCCCCAATAAATGCACGACATATACCTAGG...AAGCACTAATATTATGTTGCTGCTCTGCGAACAGCCCAGTAGTCCCATTTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
CDS-3UTR GCA 90 bp CAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAAATGCTACTGATGCCTAGGTATATGTCGTaGATTTATTGGGGCAATAGA +
Preference number: 4 (lower is better)
Translates to: QKRMCCFPSSLAFKMLLMPRYMS*IYWGNR
Trigger: TCTATTGCCCCAATAAATGCACGACATATACCTAGG...CATCAGTAGCATTTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR GCA 90 bp AACTCAAGGACCCAGAGGGGAACCAAGTTATGTTATACCATTTACAAAATACCACAGAAACGCATGTGCTaGTTTCCATCATCCCTTGCA +
Preference number: 4 (lower is better)
Translates to: NSRTQRGTKLCYTIYKIPQKRMC*FPSSLA
Trigger: TGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTG...TGGTATTTTGTAAATGGTATAACATAACTTGGTTCCCCTCTGGGTCCTTGAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR GCA 90 bp AACTCAAGGACCCAGAGGGGAACCAAGTTATGTTATACCATTTACAAAATACCATTGTGGTTCTGGCCTTaGAGCCTTCTGGAGAATCTT +
Preference number: 4 (lower is better)
Translates to: NSRTQRGTKLCYTIYKIPLWFWP*SLLENL
Trigger: AAGATTCTCCAGAAGGCTGCAAGGCCAGAACCACAA...TGGTATTTTGTAAATGGTATAACATAACTTGGTTCCCCTCTGGGTCCTTGAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
CDS-3UTR GCA 90 bp CAATGTGCTGAAAGTCAGTGCCCAACTAGACAATCTGAGCTACTACATACACTTGAACTGTCAATACACTaGACCCTGTTTAAATGGCTG +
Preference number: 4 (lower is better)
Translates to: QCAESQCPTRQSELLHTLELSIH*TLFKWL
Trigger: CAGCCATTTAAACAGGGTGCAGTGTATTGACAGTTC...AAGTGTATGTAGTAGCTCAGATTGTCTAGTTGGGCACTGACTTTCAGCACATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000469059.2
ENST00000480402.1
CDS-3UTR CCA 90 bp CAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAAATGCTACTGATGATTACTTTCTGCCTCTaGGACCGGTATAACCATATT +
Preference number: 4 (lower is better)
Translates to: QKRMCCFPSSLAFKMLLMITFCL*DRYNHI
Trigger: AATATGGTTATACCGGTCCCAGAGGCAGAAAGTAAT...CATCAGTAGCATTTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR CCA 90 bp AAGGAAATGGGACTACTGGGCTGTTCGCAGAGCAGCAACATAATATTAGTGCTTCTCCTCAAATTGCAATaGGCAGATGTCCATTTTCTT +
Preference number: 4 (lower is better)
Translates to: KEMGLLGCSQSSNIILVLLLKLQ*ADVHFL
Trigger: AAGAAAATGGACATCTGCCCATTGCAATTTGAGGAG...AAGCACTAATATTATGTTGCTGCTCTGCGAACAGCCCAGTAGTCCCATTTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
CDS-3UTR CCA 90 bp ACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAAATGCTACTGATAAGGATCATTTGTGCTaGAACCATCTCGCTTCTCTT +
Preference number: 4 (lower is better)
Translates to: TETHVLLSIIPCIQNATDKDHLC*NHLASL
Trigger: AAGAGAAGCGAGATGGTTCCAGCACAAATGATCCTT...ATCAGTAGCATTTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR CCA 90 bp TGTTATACCATTTACAAAATACCAAGGAGTCCACAGCTACCTAACACATTTACTGAGGTACTGCATGTCTaGGTCCCAGGTTGTGCTGTT +
Preference number: 4 (lower is better)
Translates to: CYTIYKIPRSPQLPNTFTEVLHV*VPGCAV
Trigger: AACAGCACAACCTGGGACCCAGACATGCAGTACCTC...AGTAAATGTGTTAGGTAGCTGTGGACTCCTTGGTATTTTGTAAATGGTATAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR CCA 90 bp GTTCCCAATCAGAACCTGAGTTGTTGCAGAATTGGCAGCAGTTACTTGATGACTAACCCTGTGATGTGTTaGTGGAGGAATTACTATTTG +
Preference number: 4 (lower is better)
Translates to: VPNQNLSCCRIGSSYLMTNPVMC*WRNYYL
Trigger: CAAATAGTAATTCCTCCACCAACACATCACAGGGTT...AGTCATCAAGTAACTGCTGCCAATTCTGCAACAACTCAGGTTCTGATTGGGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667706.1
CDS-3UTR CCA 90 bp TTCACAGAAGAGAGGTCAAATATTTCCAAAGGAAGGCACCCGATATTTGTGGTTTGGGCAAGTTGGGGATaGAAAGATTCAAGAGACTTC +
Preference number: 4 (lower is better)
Translates to: FTEERSNISKGRHPIFVVWASWG*KDSRDF
Trigger: GAAGTCTCTTGAATCTTTCCATCCCCAACTTGCCCA...AACCACAAATATCGGGTGCCTTCCTTTGGAAATATTTGACCTCTCTTCTGTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
CDS-3UTR CCA 90 bp TCAAGGACCCAGAGGGGAACCAAGTTATGTTATACCATTTACAAAATACCAAGGGCTTTGTGGGCAAGTTaGGGATGGAAAGATTCAAGA +
Preference number: 4 (lower is better)
Translates to: SRTQRGTKLCYTIYKIPRALWAS*GWKDSR
Trigger: TCTTGAATCTTTCCATCCCCAACTTGCCCACAAAGC...CCTTGGTATTTTGTAAATGGTATAACATAACTTGGTTCCCCTCTGGGTCCTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
3UTR CAA 72 bp TTAATCGAATGTTGTTCCCAATCAGAACCTGAGTTGTaGCAGAATTGGCAGCAGTTACTTGATGACTCAGTG +
Preference number: 4 (lower is better)
Translates to: LIECCSQSEPEL*QNWQQLLDDSV
Trigger: CACTGAGTCATCAAGTAACTGCTGCCAATTCTGCAACAACTCAGGTTCTGATTGGGAACAACATTCGATTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667706.1
3UTR CAA 72 bp CAGTTAATCGAATGTTGTTCCCAATCAGAACCTGAGTaGTTGCAGAATTGGCAGCAGTTACTTGATGACTCA +
Preference number: 4 (lower is better)
Translates to: QLIECCSQSEPE*LQNWQQLLDDS
Trigger: TGAGTCATCAAGTAACTGCTGCCAATTCTGCAACAACTCAGGTTCTGATTGGGAACAACATTCGATTAACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667706.1
CDS-3UTR TCA 90 bp ACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAAATGCTACTGATAAATGCAAAGTGTGCTaGACCACTGCTACTTTTACT +
Preference number: 4 (lower is better)
Translates to: TETHVLLSIIPCIQNATDKCKVC*TTATFT
Trigger: AGTAAAAGTAGCAGTGGTTCAGCACACTTTGCATTT...ATCAGTAGCATTTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
CDS-3UTR TCA 90 bp ACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAAATGCTACTGATGGCTTTTCTGATTCATaGTTTTCCCTTGGAACTGAA +
Preference number: 4 (lower is better)
Translates to: TETHVLLSIIPCIQNATDGFSDS*FSLGTE
Trigger: TTCAGTTCCAAGGGAAAATCATGAATCAGAAAAGCC...ATCAGTAGCATTTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR TCA 90 bp TTTAAATGGCTGTACCTGAAAACCAAGGTATGCAATTCCTTAGGATTAGAAGTCACTCCTGGACTTCCTTaGACTGTCAATACACTGCAC +
Preference number: 4 (lower is better)
Translates to: FKWLYLKTKVCNSLGLEVTPGLP*TVNTLH
Trigger: GTGCAGTGTATTGACAGTTCAAGGAAGTCCAGGAGT...GACTTCTAATCCTAAGGAATTGCATACCTTGGTTTTCAGGTACAGCCATTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469059.2
CDS-3UTR TCA 90 bp TACACAGAAAACTCAAGGACCCAGAGGGGAACCAAGTTATGTTATACCATTTACCAGTTCAAAGTGTGCTaGACCACTGCTACTTTTACT +
Preference number: 4 (lower is better)
Translates to: YTENSRTQRGTKLCYTIYQFKVC*TTATFT
Trigger: AGTAAAAGTAGCAGTGGTTCAGCACACTTTGAACTG...GTAAATGGTATAACATAACTTGGTTCCCCTCTGGGTCCTTGAGTTTTCTGTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000667706.1
CDS-3UTR GCA 90 bp GATACACAGAAAACTCAAGGACCCAGAGGGGAACCAAGTTATGTTATACCATTTAGCAATATTACTTTCTaGCTCTGGGACCGGTATAAC +
Preference number: 4 (lower is better)
Translates to: DTQKTQGPRGEPSYVIPFSNITF*LWDRYN
Trigger: GTTATACCGGTCCCAGAGGCAGAAAGTAATATTGCT...AAATGGTATAACATAACTTGGTTCCCCTCTGGGTCCTTGAGTTTTCTGTGTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR GCA 90 bp ACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAAATGCTACTGATCTCCTTCACATCCATTaGTTCCTGGTGTTTAAATTG +
Preference number: 4 (lower is better)
Translates to: TETHVLLSIIPCIQNATDLLHIH*FLVFKL
Trigger: CAATTTAAACACCAGGAAGCAATGGATGTGAAGGAG...ATCAGTAGCATTTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR GCA 90 bp TGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAAATGCTACAGATCGGCTTTATCTTaGTTATTAACTTTGAACTCC +
Preference number: 4 (lower is better)
Translates to: CHRNACAAFHHPLHSKCYRSALS*LLTLNS
Trigger: GGAGTTCAAAGTTAATAAGCAAGATAAAGCCGATCT...GTAGCATTTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR GCA 90 bp TTACTTGTCCTAATGATAGTAGACCAGGAAGATCCCCATTTAATAGTACATTCCCGCTACTGTGTTGTCTaGTATGTTGTTCAGTGCTGG +
Preference number: 4 (lower is better)
Translates to: LLVLMIVDQEDPHLIVHSRYCVV*YVVQCW
Trigger: CCAGCACTGAACAACATAGCAGACAACACAGTAGCG...GGAATGTACTATTAAATGGGGATCTTCCTGGTCTACTATCATTAGGACAAGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
CDS-3UTR GCA 90 bp TGGCTGTTTTTAGAAACTGGAATGATGATACACGTACAGCAATTACTGCATTCTATGAGAGATGAGCATTaGTGTCAAGTCCCCACAGCT +
Preference number: 4 (lower is better)
Translates to: WLFLETGMMIHVQQLLHSMRDEH*CQVPTA
Trigger: AGCTGTGGGGACTTGACAGCAATGCTCATCTCTCAT...AGAATGCAGTAATTGCTGTACGTGTATCATCATTCCAGTTTCTAAAAACAGCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
CDS-3UTR GCA 90 bp TGTGCTGAAAGTCAGTGCCCAACTAGACAATCTGAGCTACTACATACACTTGGCCTGAAAACCAAGGTATaGAATTCCTTAGGATTAGAA +
Preference number: 4 (lower is better)
Translates to: CAESQCPTRQSELLHTLGLKTKV*NSLGLE
Trigger: TTCTAATCCTAAGGAATTGCATACCTTGGTTTTCAG...GCCAAGTGTATGTAGTAGCTCAGATTGTCTAGTTGGGCACTGACTTTCAGCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469059.2
CDS-3UTR CCA 90 bp GATACACAGAAAACTCAAGGACCCAGAGGGGAACCAAGTTATGTTATACCATTTAAGGATCATTTGTGCTaGAACCATCTCGCTTCTCTT +
Preference number: 4 (lower is better)
Translates to: DTQKTQGPRGEPSYVIPFKDHLC*NHLASL
Trigger: AAGAGAAGCGAGATGGTTCCAGCACAAATGATCCTT...AAATGGTATAACATAACTTGGTTCCCCTCTGGGTCCTTGAGTTTTCTGTGTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR CCA 90 bp TCAAGGACCCAGAGGGGAACCAAGTTATGTTATACCATTTACAAAATACCAAGGGTTCTTCGTCTGAGCTaGGAAAGTCATACTGATTCA +
Preference number: 4 (lower is better)
Translates to: SRTQRGTKLCYTIYKIPRVLRLS*ESHTDS
Trigger: TGAATCAGTATGACTTTCCCAGCTCAGACGAAGAAC...CCTTGGTATTTTGTAAATGGTATAACATAACTTGGTTCCCCTCTGGGTCCTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR CCA 90 bp TCAAGGACCCAGAGGGGAACCAAGTTATGTTATACCATTTACAAAATACCAAGGAATCCAATACACCTTTaGGGTACGGTGAGAGTAGTT +
Preference number: 4 (lower is better)
Translates to: SRTQRGTKLCYTIYKIPRNPIHL*GTVRVV
Trigger: AACTACTCTCACCGTACCCCAAAGGTGTATTGGATT...CCTTGGTATTTTGTAAATGGTATAACATAACTTGGTTCCCCTCTGGGTCCTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR CCA 90 bp CAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAAATGCTACTGATGATGTCGTGCATTTATTaGGGCAATAGAGTTTACAGT +
Preference number: 4 (lower is better)
Translates to: QKRMCCFPSSLAFKMLLMMSCIY*GNRVYS
Trigger: ACTGTAAACTCTATTGCCCCAATAAATGCACGACAT...CATCAGTAGCATTTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR CCA 90 bp TACACAGAAAACTCAAGGACCCAGAGGGGAACCAAGTTATGTTATACCATTTACATGAAGATGGGACCTTaGAAACTTGACAGTTTGCTG +
Preference number: 4 (lower is better)
Translates to: YTENSRTQRGTKLCYTIYMKMGP*KLDSLL
Trigger: CAGCAAACTGTCAAGTTTCCAAGGTCCCATCTTCAT...GTAAATGGTATAACATAACTTGGTTCCCCTCTGGGTCCTTGAGTTTTCTGTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR TCA 90 bp AACTCAAGGACCCAGAGGGGAACCAAGTTATGTTATACCATTTACAAAATACCACATCATCCTTCATCTTaGATCCCATCAGTTGTTCTG +
Preference number: 4 (lower is better)
Translates to: NSRTQRGTKLCYTIYKIPHHPSS*IPSVVL
Trigger: CAGAACAACTGATGGGATTCAAGATGAAGGATGATG...TGGTATTTTGTAAATGGTATAACATAACTTGGTTCCCCTCTGGGTCCTTGAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR TCA 90 bp TGGCTGTTTTTAGAAACTGGAATGATGATACACGTACAGCAATTACTGCATTCTTTCCCAATCAGAACCTaGGTTGTTGCAGAATTGGCA +
Preference number: 4 (lower is better)
Translates to: WLFLETGMMIHVQQLLHSFPIRT*VVAELA
Trigger: TGCCAATTCTGCAACAACTCAGGTTCTGATTGGGAA...AGAATGCAGTAATTGCTGTACGTGTATCATCATTCCAGTTTCTAAAAACAGCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
CDS-3UTR TCA 90 bp AAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAAATGCTACTGATGCATCATTCAAAATGCTACTaGTGCATAGCACCTAATCAA +
Preference number: 4 (lower is better)
Translates to: KRMCCFPSSLAFKMLLMHHSKCY*CIAPNQ
Trigger: TTGATTAGGTGCTATGCATCAGTAGCATTTTGAATG...ATGCATCAGTAGCATTTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR TCA 90 bp GACTTCCTTGAACTGTCAATACACTGCACCCTGTTTAAATGGCTGTACCTGAAATTAAATGGCTGTACCTaGAAACCAAGGTATGCAATT +
Preference number: 4 (lower is better)
Translates to: DFLELSIHCTLFKWLYLKLNGCT*KPRYAI
Trigger: AATTGCATACCTTGGTTTTCAGGTACAGCCATTTAA...TTTCAGGTACAGCCATTTAAACAGGGTGCAGTGTATTGACAGTTCAAGGAAGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469059.2
CDS-3UTR TCA 90 bp GATACACAGAAAACTCAAGGACCCAGAGGGGAACCAAGTTATGTTATACCATTTGTACAGAATGATGTCTaGGGAAAGACACTGTGTTAT +
Preference number: 4 (lower is better)
Translates to: DTQKTQGPRGEPSYVIPFVQNDV*GKTLCY
Trigger: ATAACACAGTGTCTTTCCTCAGACATCATTCTGTAC...AAATGGTATAACATAACTTGGTTCCCCTCTGGGTCCTTGAGTTTTCTGTGTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000667706.1
CDS-3UTR GCA 90 bp AACCTTAAGGATAATGTATGCCATTGGACTGGGCATTCAGACTTCGGTACTGACAGATCGGCTTTATCTTaGTTATTAACTTTGAACTCC +
Preference number: 4 (lower is better)
Translates to: NLKDNVCHWTGHSDFGTDRSALS*LLTLNS
Trigger: GGAGTTCAAAGTTAATAAGCAAGATAAAGCCGATCT...GTCAGTACCGAAGTCTGAATGCCCAGTCCAATGGCATACATTATCCTTAAGGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
CDS-3UTR GCA 90 bp AACTCAAGGACCCAGAGGGGAACCAAGTTATGTTATACCATTTACAAAATACCAATAGTACTGACAGCCTaGTTTCCTACGGAAAGCAAA +
Preference number: 4 (lower is better)
Translates to: NSRTQRGTKLCYTIYKIPIVLTA*FPTESK
Trigger: TTTGCTTTCCGTAGGAAAGCAGGCTGTCAGTACTAT...TGGTATTTTGTAAATGGTATAACATAACTTGGTTCCCCTCTGGGTCCTTGAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR GCA 90 bp TATACCATTTACAAAATACCAAGGAGTCCACAGCTACCTAACACATTTACTACAGTCCGAGGCCTAAAATaGCGCCATCTACATGATTTG +
Preference number: 4 (lower is better)
Translates to: YTIYKIPRSPQLPNTFTTVRGLK*RHLHDL
Trigger: CAAATCATGTAGATGGCGGCATTTTAGGCCTCGGAC...TGTAGTAAATGTGTTAGGTAGCTGTGGACTCCTTGGTATTTTGTAAATGGTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR CCA 90 bp TACACAGAAAACTCAAGGACCCAGAGGGGAACCAAGTTATGTTATACCATTTACATTACTTTCTGCCTCTaGGACCGGTATAACCATATT +
Preference number: 4 (lower is better)
Translates to: YTENSRTQRGTKLCYTIYITFCL*DRYNHI
Trigger: AATATGGTTATACCGGTCCCAGAGGCAGAAAGTAAT...GTAAATGGTATAACATAACTTGGTTCCCCTCTGGGTCCTTGAGTTTTCTGTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR CCA 90 bp CATGCACATGATGTGATGACACTTCATCTCTATACAATCTCACATCTCACACTCATTACTTTCTGCCTCTaGGACCGGTATAACCATATT +
Preference number: 4 (lower is better)
Translates to: HAHDVMTLHLYTISHLTLITFCL*DRYNHI
Trigger: AATATGGTTATACCGGTCCCAGAGGCAGAAAGTAAT...GAGTGTGAGATGTGAGATTGTATAGAGATGAAGTGTCATCACATCATGTGCATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR CCA 90 bp TCAAGGACCCAGAGGGGAACCAAGTTATGTTATACCATTTACAAAATACCAAGGCCTGTGATGTGTTGGTaGAGGAATTACTATTTGCTT +
Preference number: 4 (lower is better)
Translates to: SRTQRGTKLCYTIYKIPRPVMCW*RNYYLL
Trigger: AAGCAAATAGTAATTCCTCCACCAACACATCACAGG...CCTTGGTATTTTGTAAATGGTATAACATAACTTGGTTCCCCTCTGGGTCCTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR TCA 90 bp GACAACATAAACTCCAGTTGTAAGGACTCCATTTGCATACTTGATTTAACACTTCTAAAAGGCTGTATGTaGATGAGCTGCTTTGGCATC +
Preference number: 4 (lower is better)
Translates to: DNINSSCKDSICILDLTLLKGCM*MSCFGI
Trigger: GATGCCAAAGCAGCTCATTCACATACAGCCTTTTAG...AAGTGTTAAATCAAGTATGCAAATGGAGTCCTTACAACTGGAGTTTATGTTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
CDS-3UTR TCA 90 bp TACACAGAAAACTCAAGGACCCAGAGGGGAACCAAGTTATGTTATACCATTTACTCCTGGTGTTTAAATTaGCTGCTATTAGTAATAGGG +
Preference number: 4 (lower is better)
Translates to: YTENSRTQRGTKLCYTIYSWCLN*LLLVIG
Trigger: CCCTATTACTAATAGCAGTCAATTTAAACACCAGGA...GTAAATGGTATAACATAACTTGGTTCCCCTCTGGGTCCTTGAGTTTTCTGTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR TCA 90 bp TGGCTGTTTTTAGAAACTGGAATGATGATACACGTACAGCAATTACTGCATTCTGAGGTATTGGCAAACTaGTTGACTGGAGAATGTTGT +
Preference number: 4 (lower is better)
Translates to: WLFLETGMMIHVQQLLHSEVLAN*LTGECC
Trigger: ACAACATTCTCCAGTCAATCAGTTTGCCAATACCTC...AGAATGCAGTAATTGCTGTACGTGTATCATCATTCCAGTTTCTAAAAACAGCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
CDS-3UTR TCA 90 bp TGTTATACCATTTACAAAATACCAAGGAGTCCACAGCTACCTAACACATTTACTTTCCCAATCAGAACCTaGGTTGTTGCAGAATTGGCA +
Preference number: 4 (lower is better)
Translates to: CYTIYKIPRSPQLPNTFTFPIRT*VVAELA
Trigger: TGCCAATTCTGCAACAACTCAGGTTCTGATTGGGAA...AGTAAATGTGTTAGGTAGCTGTGGACTCCTTGGTATTTTGTAAATGGTATAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR TCA 90 bp TTACTTGTCCTAATGATAGTAGACCAGGAAGATCCCCATTTAATAGTACATTCCAGAAACAAAACCCTGTaGTGTGTTGGTGGAGGAATT +
Preference number: 4 (lower is better)
Translates to: LLVLMIVDQEDPHLIVHSRNKTL*CVGGGI
Trigger: AATTCCTCCACCAACACATCACAGGGTTTTGTTTCT...GGAATGTACTATTAAATGGGGATCTTCCTGGTCTACTATCATTAGGACAAGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
CDS-3UTR TCA 90 bp GTTACTTGTCCTAATGATAGTAGACCAGGAAGATCCCCATTTAATAGTACATTCCAGCACAGGAACCAATaGAGGTACAGTGTACAAAAA +
Preference number: 4 (lower is better)
Translates to: VTCPNDSRPGRSPFNSTFQHRNQ*RYSVQK
Trigger: TTTTTGTACACTGTACCTTCATTGGTTCCTGTGCTG...GAATGTACTATTAAATGGGGATCTTCCTGGTCTACTATCATTAGGACAAGTAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
CDS-3UTR GCA 90 bp TGGCTGTTTTTAGAAACTGGAATGATGATACACGTACAGCAATTACTGCATTCTCTGTTGCTGAATTTGTaGAAGCTGCTGTTTCTGCAT +
Preference number: 4 (lower is better)
Translates to: WLFLETGMMIHVQQLLHSLLLNL*KLLFLH
Trigger: ATGCAGAAACAGCAGCTTGCACAAATTCAGCAACAG...AGAATGCAGTAATTGCTGTACGTGTATCATCATTCCAGTTTCTAAAAACAGCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
CDS-3UTR GCA 90 bp TCAAGGACCCAGAGGGGAACCAAGTTATGTTATACCATTTACAAAATACCAAGGACGTACAGCAATTACTaGATTCTTCTCCCTTATATC +
Preference number: 4 (lower is better)
Translates to: SRTQRGTKLCYTIYKIPRTYSNY*ILLPYI
Trigger: GATATAAGGGAGAAGAATGCAGTAATTGCTGTACGT...CCTTGGTATTTTGTAAATGGTATAACATAACTTGGTTCCCCTCTGGGTCCTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
CDS-3UTR CCA 90 bp TGGCTGTTTTTAGAAACTGGAATGATGATACACGTACAGCAATTACTGCATTCTGAGTTGTTGCAGAATTaGCAGCAGTTACTTGATGAC +
Preference number: 4 (lower is better)
Translates to: WLFLETGMMIHVQQLLHSELLQN*QQLLDD
Trigger: GTCATCAAGTAACTGCTGCCAATTCTGCAACAACTC...AGAATGCAGTAATTGCTGTACGTGTATCATCATTCCAGTTTCTAAAAACAGCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
CDS-3UTR CCA 90 bp TCAAGGACCCAGAGGGGAACCAAGTTATGTTATACCATTTACAAAATACCAAGGATGTCGTGCATTTATTaGGGCAATAGAGTTTACAGT +
Preference number: 4 (lower is better)
Translates to: SRTQRGTKLCYTIYKIPRMSCIY*GNRVYS
Trigger: ACTGTAAACTCTATTGCCCCAATAAATGCACGACAT...CCTTGGTATTTTGTAAATGGTATAACATAACTTGGTTCCCCTCTGGGTCCTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR CCA 90 bp GACAACATAAACTCCAGTTGTAAGGACTCCATTTGCATACTTGATTTAACACTTTGGGCAAGTTGGGGATaGAAAGATTCAAGAGACTTC +
Preference number: 4 (lower is better)
Translates to: DNINSSCKDSICILDLTLWASWG*KDSRDF
Trigger: GAAGTCTCTTGAATCTTTCCATCCCCAACTTGCCCA...AAGTGTTAAATCAAGTATGCAAATGGAGTCCTTACAACTGGAGTTTATGTTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
CDS-3UTR CCA 90 bp GAGCAGCAACATAATATTAGTGCTTTAAGTACCAGAAACCACCCACAGCTTTGTTGTAACAATATAGGCTaGATACTTGTGTCCCTAGAA +
Preference number: 4 (lower is better)
Translates to: EQQHNISALSTRNHPQLCCNNIG*ILVSLE
Trigger: TTCTAGGGACACAAGTATCCAGCCTATATTGTTACA...ACAAAGCTGTGGGTGGTTTCTGGTACTTAAAGCACTAATATTATGTTGCTGCTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375110.6
CDS-3UTR TCA 90 bp TGGCTGTTTTTAGAAACTGGAATGATGATACACGTACAGCAATTACTGCATTCTCTGGGAAAGTCATACTaGTTCAGATCTTTAGCATTG +
Preference number: 4 (lower is better)
Translates to: WLFLETGMMIHVQQLLHSLGKSY*FRSLAL
Trigger: CAATGCTAAAGATCTGAATCAGTATGACTTTCCCAG...AGAATGCAGTAATTGCTGTACGTGTATCATCATTCCAGTTTCTAAAAACAGCCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
CDS-3UTR TCA 90 bp AATGATGATACACGTACAGCAATTACTGCATTCTTCTCCCTTATATCCTTTTCGAAATGCAAAGTGTGCTaGACCACTGCTACTTTTACT +
Preference number: 4 (lower is better)
Translates to: NDDTRTAITAFFSLISFSKCKVC*TTATFT
Trigger: AGTAAAAGTAGCAGTGGTTCAGCACACTTTGCATTT...CGAAAAGGATATAAGGGAGAAGAATGCAGTAATTGCTGTACGTGTATCATCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
CDS-3UTR TCA 90 bp AATGATGATACACGTACAGCAATTACTGCATTCTTCTCCCTTATATCCTTTTCGGGCTTTTCTGATTCATaGTTTTCCCTTGGAACTGAA +
Preference number: 4 (lower is better)
Translates to: NDDTRTAITAFFSLISFSGFSDS*FSLGTE
Trigger: TTCAGTTCCAAGGGAAAATCATGAATCAGAAAAGCC...CGAAAAGGATATAAGGGAGAAGAATGCAGTAATTGCTGTACGTGTATCATCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
CDS-3UTR TCA 90 bp AATGATGATACACGTACAGCAATTACTGCATTCTTCTCCCTTATATCCTTTTCGAGAAAAATTGAAGCATaGGAGATGAGCATTGCTGTC +
Preference number: 4 (lower is better)
Translates to: NDDTRTAITAFFSLISFSRKIEA*EMSIAV
Trigger: GACAGCAATGCTCATCTCTCATGCTTCAATTTTTCT...CGAAAAGGATATAAGGGAGAAGAATGCAGTAATTGCTGTACGTGTATCATCATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
CDS-3UTR TCA 90 bp TGTTATACCATTTACAAAATACCAAGGAGTCCACAGCTACCTAACACATTTACTTTCAGACTTCGGTACTaGCAAAGCACTAGTAGTAGT +
Preference number: 4 (lower is better)
Translates to: CYTIYKIPRSPQLPNTFTFRLRY*QSTSSS
Trigger: ACTACTACTAGTGCTTTGTCAGTACCGAAGTCTGAA...AGTAAATGTGTTAGGTAGCTGTGGACTCCTTGGTATTTTGTAAATGGTATAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
CDS-3UTR GCA 90 bp TGGCTGTTTTTAGAAACTGGAATGATGATACACGTACAGCAATTACTGCATTCTCTCCTTCACATCCATTaGTTCCTGGTGTTTAAATTG +
Preference number: 4 (lower is better)
Translates to: WLFLETGMMIHVQQLLHSLLHIH*FLVFKL
Trigger: CAATTTAAACACCAGGAAGCAATGGATGTGAAGGAG...AGAATGCAGTAATTGCTGTACGTGTATCATCATTCCAGTTTCTAAAAACAGCCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
CDS-3UTR CCA 90 bp GACAACATAAACTCCAGTTGTAAGGACTCCATTTGCATACTTGATTTAACACTTGTTCTTCGTCTGAGCTaGGAAAGTCATACTGATTCA +
Preference number: 4 (lower is better)
Translates to: DNINSSCKDSICILDLTLVLRLS*ESHTDS
Trigger: TGAATCAGTATGACTTTCCCAGCTCAGACGAAGAAC...AAGTGTTAAATCAAGTATGCAAATGGAGTCCTTACAACTGGAGTTTATGTTGTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
CDS-3UTR CCA 90 bp GTTACTTGTCCTAATGATAGTAGACCAGGAAGATCCCCATTTAATAGTACATTCAACCCTGTGATGTGTTaGTGGAGGAATTACTATTTG +
Preference number: 4 (lower is better)
Translates to: VTCPNDSRPGRSPFNSTFNPVMC*WRNYYL
Trigger: CAAATAGTAATTCCTCCACCAACACATCACAGGGTT...GAATGTACTATTAAATGGGGATCTTCCTGGTCTACTATCATTAGGACAAGTAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
CDS-3UTR CCA 90 bp AATGATGATACACGTACAGCAATTACTGCATTCTTCTCCCTTATATCCTTTTCGAACCCTGTGATGTGTTaGTGGAGGAATTACTATTTG +
Preference number: 4 (lower is better)
Translates to: NDDTRTAITAFFSLISFSNPVMC*WRNYYL
Trigger: CAAATAGTAATTCCTCCACCAACACATCACAGGGTT...CGAAAAGGATATAAGGGAGAAGAATGCAGTAATTGCTGTACGTGTATCATCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
CDS-3UTR CCA 90 bp GAGCAGCAACATAATATTAGTGCTTTAAGTACCAGAAACCACCCACAGCTTTGTGCTGTTTTTAGAAACTaGAATGATGATACACGTACA +
Preference number: 4 (lower is better)
Translates to: EQQHNISALSTRNHPQLCAVFRN*NDDTRT
Trigger: TGTACGTGTATCATCATTCCAGTTTCTAAAAACAGC...ACAAAGCTGTGGGTGGTTTCTGGTACTTAAAGCACTAATATTATGTTGCTGCTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
CDS-3UTR CCA 90 bp TACACAGAAAACTCAAGGACCCAGAGGGGAACCAAGTTATGTTATACCATTTACCAACATGTAATGCCCTaGGTTTATTTTGTGAGAATT +
Preference number: 4 (lower is better)
Translates to: YTENSRTQRGTKLCYTIYQHVMP*VYFVRI
Trigger: AATTCTCACAAAATAAACCCAGGGCATTACATGTTG...GTAAATGGTATAACATAACTTGGTTCCCCTCTGGGTCCTTGAGTTTTCTGTGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
3UTR CAA 72 bp TGGGGATGGAAAGATTCAAGAGACTTCATTTTTAGCTaGTTACTTGTCCTAATGATAGTAGACCAGGAAGAT +
Preference number: 4 (lower is better)
Translates to: WGWKDSRDFIFS*LLVLMIVDQED
Trigger: ATCTTCCTGGTCTACTATCATTAGGACAAGTAACAAGCTAAAAATGAAGTCTCTTGAATCTTTCCATCCCCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
CDS-3UTR TCA 90 bp AATGATGATACACGTACAGCAATTACTGCATTCTTCTCCCTTATATCCTTTTCGCATTCAAAATGCTACTaGTGCATAGCACCTAATCAA +
Preference number: 4 (lower is better)
Translates to: NDDTRTAITAFFSLISFSHSKCY*CIAPNQ
Trigger: TTGATTAGGTGCTATGCATCAGTAGCATTTTGAATG...CGAAAAGGATATAAGGGAGAAGAATGCAGTAATTGCTGTACGTGTATCATCATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
CDS-3UTR GCA 90 bp TATACCATTTACAAAATACCAAGGAGTCCACAGCTACCTAACACATTTACTACACTTAAGGATAATGTATaGCATTGGACTGGGCATTCA +
Preference number: 4 (lower is better)
Translates to: YTIYKIPRSPQLPNTFTTLKDNV*HWTGHS
Trigger: TGAATGCCCAGTCCAATGGCATACATTATCCTTAAG...TGTAGTAAATGTGTTAGGTAGCTGTGGACTCCTTGGTATTTTGTAAATGGTATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
CDS-3UTR CCA 90 bp TGTTATACCATTTACAAAATACCAAGGAGTCCACAGCTACCTAACACATTTACTCTCCTCAAATTGCAATaGGCAGATGTCCATTTTCTT +
Preference number: 4 (lower is better)
Translates to: CYTIYKIPRSPQLPNTFTLLKLQ*ADVHFL
Trigger: AAGAAAATGGACATCTGCCCATTGCAATTTGAGGAG...AGTAAATGTGTTAGGTAGCTGTGGACTCCTTGGTATTTTGTAAATGGTATAACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS CCA 90 bp AACGACAGTTTACTCATCTCAGGCGCAGCAGATACCTCTCCGCTCTaGGGAAACGGCCCCGGCCAGCGGGATCATGGAGAACCGGGGGTT +
Preference number: 5 (lower is better)
Translates to: NDSLLISGAADTSPL*GNGPGQRDHGEPGV
Trigger: AACCCCCGGTTCTCCATGATCCCGCTGGCCGGGGCCGTTTCCCCAGAGCGGAGAGGTATCTGCTGCGCCTGAGATGAGTAAACTGTCGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000469059.2
ENST00000480402.1
ENST00000667706.1
CDS-3UTR CAA 90 bp TTGCTGTCAAGTCCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATACCGCTGCCGGGGACTaGAGGGGCGGAGCGCAGAGC +
Preference number: 5 (lower is better)
Translates to: LLSSPHSCHRNACAAFHHTAAGD*RGGAQS
Trigger: GCTCTGCGCTCCGCCCCTCAAGTCCCCGGCAGCGGT...ATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGGACTTGACAGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000667706.1
CDS-3UTR CAA 90 bp AAGATGGGACCTTGGAAACTTGACAGTTTGCTGCAGCGGCCAGCTTTAAGGCAGACCGCTGCCGGGGACTaGAGGGGCGGAGCGCAGAGC +
Preference number: 5 (lower is better)
Translates to: KMGPWKLDSLLQRPALRQTAAGD*RGGAQS
Trigger: GCTCTGCGCTCCGCCCCTCAAGTCCCCGGCAGCGGT...CTGCCTTAAAGCTGGCCGCTGCAGCAAACTGTCAAGTTTCCAAGGTCCCATCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000667706.1
CDS-3UTR CAA 90 bp CCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAAATGCTACTGACCGCTGCCGGGGACTaGAGGGGCGGAGCGCAGAGC +
Preference number: 5 (lower is better)
Translates to: PQKRMCCFPSSLAFKMLLTAAGD*RGGAQS
Trigger: GCTCTGCGCTCCGCCCCTCAAGTCCCCGGCAGCGGT...CAGTAGCATTTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000667706.1
CDS-3UTR CAA 90 bp CCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAGCAGGACTCGTCTGTaGGGGAGTAGCAGCGGCAGA +
Preference number: 5 (lower is better)
Translates to: PHSCHRNACAAFHHPLHSSRTRL*GSSSGR
Trigger: TCTGCCGCTGCTACTCCCCAACAGACGAGTCCTGCT...TGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR CAA 90 bp GACTTCCTTGAACTGTCAATACACTGCACCCTGTTTAAATGGCTGTACCTGAAAACCGCTGCCGGGGACTaGAGGGGCGGAGCGCAGAGC +
Preference number: 5 (lower is better)
Translates to: DFLELSIHCTLFKWLYLKTAAGD*RGGAQS
Trigger: GCTCTGCGCTCCGCCCCTCAAGTCCCCGGCAGCGGT...TTTCAGGTACAGCCATTTAAACAGGGTGCAGTGTATTGACAGTTCAAGGAAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000469059.2
CDS-3UTR CAA 90 bp ATGAGCATTGCTGTCAAGTCCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTAGCAGGACTCGTCTGTaGGGGAGTAGCAGCGGCAGA +
Preference number: 5 (lower is better)
Translates to: MSIAVKSPQLPQKRMCCFSRTRL*GSSSGR
Trigger: TCTGCCGCTGCTACTCCCCAACAGACGAGTCCTGCT...AAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGGACTTGACAGCAATGCTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR CAA 90 bp GCTGTCAAGTCCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCAAACCACCCACAGCTTaGTGGGCAAGTTGGGGATGG +
Preference number: 5 (lower is better)
Translates to: AVKSPQLPQKRMCCFPSSKPPTA*WASWGW
Trigger: CCATCCCCAACTTGCCCACAAAGCTGTGGGTGGTTT...GGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGGACTTGACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
CDS-3UTR CAA 90 bp ATGAGAGATGAGCATTGCTGTCAAGTCCCCACAGCTGCCACAGAAACGCATGTGGAAGGCACCCGATATTaGTGGTTCTGGCCTTGCAGC +
Preference number: 5 (lower is better)
Translates to: MRDEHCCQVPTAATETHVEGTRY*WFWPCS
Trigger: GCTGCAAGGCCAGAACCACAAATATCGGGTGCCTTC...CACATGCGTTTCTGTGGCAGCTGTGGGGACTTGACAGCAATGCTCATCTCTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
CDS GCA 90 bp GGGAAAGTCATACTGATTCAGATCTTTAGCATTGAAGACTGGCAGTaGAGCAGGACTCGTCTGTTGGGGAGTAGCAGCGGCAGACGATGG +
Preference number: 5 (lower is better)
Translates to: GKVILIQIFSIEDWQ*SRTRLLGSSSGRRW
Trigger: CCATCGTCTGCCGCTGCTACTCCCCAACAGACGAGTCCTGCTGCACTGCCAGTCTTCAATGCTAAAGATCTGAATCAGTATGACTTTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000479380.2
ENST00000495790.1
ENST00000667706.1
CDS-3UTR CAA 90 bp CCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCATGGAAACTTGACAGTTaGCTGCAGCGGCCAGCTTTA +
Preference number: 5 (lower is better)
Translates to: PHSCHRNACAAFHHPLHSWKLDS*LQRPAL
Trigger: TAAAGCTGGCCGCTGCAGCAAACTGTCAAGTTTCCA...TGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR CAA 90 bp TGCTGTCAAGTCCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCTTTGTGGTTCTGGCCTaGCAGCCTTCTGGAGAATCT +
Preference number: 5 (lower is better)
Translates to: CCQVPTAATETHVLLSIIFVVLA*QPSGES
Trigger: AGATTCTCCAGAAGGCTGCAAGGCCAGAACCACAAA...GATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGGACTTGACAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
CDS CCA 90 bp AGATCTTTAGCATTGAAGACTGGCAGTGCAGCAGGACTCGTCTGTTaGGGAGTAGCAGCGGCAGACGATGGTAAGACTTTGGGCTTCTTT +
Preference number: 5 (lower is better)
Translates to: RSLALKTGSAAGLVC*GVAAADDGKTLGFF
Trigger: AAAGAAGCCCAAAGTCTTACCATCGTCTGCCGCTGCTACTCCCCAACAGACGAGTCCTGCTGCACTGCCAGTCTTCAATGCTAAAGATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000479380.2
ENST00000495790.1
ENST00000667706.1
CDS CCA 90 bp CTTCCACCGCGCCCAACCCGTCTTCGTGCAAATCCAATACACCTTTaGGGTACGGTGAGAGTAGTTAAGCAGTATCTATATCGCACATCC +
Preference number: 5 (lower is better)
Translates to: LPPRPTRLRANPIHL*GTVRVVKQYLYRTS
Trigger: GGATGTGCGATATAGATACTGCTTAACTACTCTCACCGTACCCCAAAGGTGTATTGGATTTGCACGAAGACGGGTTGGGCGCGGTGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000479380.2
ENST00000495790.1
ENST00000667706.1
CDS-3UTR CAA 90 bp CAATCTGAGCTACTACATACACTTGGCTTATCTGTAAAGTTAGATTTAAGACACACCGCTGCCGGGGACTaGAGGGGCGGAGCGCAGAGC +
Preference number: 5 (lower is better)
Translates to: QSELLHTLGLSVKLDLRHTAAGD*RGGAQS
Trigger: GCTCTGCGCTCCGCCCCTCAAGTCCCCGGCAGCGGT...GTGTCTTAAATCTAACTTTACAGATAAGCCAAGTGTATGTAGTAGCTCAGATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000469059.2
ENST00000480402.1
CDS-3UTR CAA 90 bp AGTCCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATCCACATAAGGATCATTaGTGCTGGAACCATCTCGCT +
Preference number: 5 (lower is better)
Translates to: SPHSCHRNACAAFHHPLHPHKDH*CWNHLA
Trigger: AGCGAGATGGTTCCAGCACAAATGATCCTTATGTGG...ATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR CAA 90 bp CTGTCAAGTCCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCAAATCCAATACACCTTaGGGGTACGGTGAGAGTAGT +
Preference number: 5 (lower is better)
Translates to: LSSPHSCHRNACAAFHHPKSNTP*GYGESS
Trigger: ACTACTCTCACCGTACCCCAAAGGTGTATTGGATTT...GGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGGACTTGACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR CAA 90 bp CCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAATTGGCAGCAGTTACTaGATGACTCAGTGCACTGTG +
Preference number: 5 (lower is better)
Translates to: PHSCHRNACAAFHHPLHSIGSSY*MTQCTV
Trigger: CACAGTGCACTGAGTCATCAAGTAACTGCTGCCAAT...TGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR CAA 90 bp CTGTCAAGTCCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTCAGAACCTGAGTTGTaGCAGAATTGGCAGCAGTTA +
Preference number: 5 (lower is better)
Translates to: LSSPHSCHRNACAAFHHPSEPEL*QNWQQL
Trigger: TAACTGCTGCCAATTCTGCAACAACTCAGGTTCTGA...GGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGGACTTGACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR CAA 90 bp CACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAAACTGGGGTTAACAACTTaGCGATGGCAAGCAGGCGAG +
Preference number: 5 (lower is better)
Translates to: HSCHRNACAAFHHPLHSKLGLTT*RWQAGE
Trigger: CTCGCCTGCTTGCCATCGCAAAGTTGTTAACCCCAG...TTTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375110.6
CDS GCA 90 bp GGAGAGCTCAGTTCAAAGTGTGCTGAACCACTGCTACTTTTACTTTaGGTAGAGGTACTGCATGTCTGGGTCCCAGGTTGTGCTGTTCCT +
Preference number: 5 (lower is better)
Translates to: GELSSKCAEPLLLLL*VEVLHVWVPGCAVP
Trigger: AGGAACAGCACAACCTGGGACCCAGACATGCAGTACCTCTACGCAAAGTAAAAGTAGCAGTGGTTCAGCACACTTTGAACTGAGCTCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000667706.1
CDS-3UTR CAA 90 bp AAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAAATGCTACTGATGCATAGCAGGACTCGTCTGTaGGGGAGTAGCAGCGGCAGA +
Preference number: 5 (lower is better)
Translates to: KRMCCFPSSLAFKMLLMHSRTRL*GSSSGR
Trigger: TCTGCCGCTGCTACTCCCCAACAGACGAGTCCTGCT...ATGCATCAGTAGCATTTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR CAA 90 bp GTCCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTAAATCCAATACACCTTaGGGGTACGGTGAGAGTAGT +
Preference number: 5 (lower is better)
Translates to: VPTAATETHVLLSIIPCIKSNTP*GYGESS
Trigger: ACTACTCTCACCGTACCCCAAAGGTGTATTGGATTT...AATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR CAA 90 bp TCCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCCAGGAGAGTTCATCATaGTCACTGTCATGTAGGGAT +
Preference number: 5 (lower is better)
Translates to: SPQLPQKRMCCFPSSLAFQESSS*SLSCRD
Trigger: ATCCCTACATGACAGTGACAATGATGAACTCTCCTG...GAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR CAA 90 bp GTCCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTAAGCTGAACCTGCCGTaGATGGACTTGTATGTACAA +
Preference number: 5 (lower is better)
Translates to: VPTAATETHVLLSIIPCIKLNLP*MDLYVQ
Trigger: TTGTACATACAAGTCCATCAACGGCAGGTTCAGCTT...AATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR CAA 90 bp TGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAAATGCTACTGGGACCTTGGAAACTaGACAGTTTGCTGCAGCGGC +
Preference number: 5 (lower is better)
Translates to: CHRNACAAFHHPLHSKCYWDLGN*TVCCSG
Trigger: GCCGCTGCAGCAAACTGTCAAGTTTCCAAGGTCCCA...GTAGCATTTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR CAA 90 bp ACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAAATTGGGACCTTGGAAACTaGACAGTTTGCTGCAGCGGC +
Preference number: 5 (lower is better)
Translates to: TAATETHVLLSIIPCIQNWDLGN*TVCCSG
Trigger: GCCGCTGCAGCAAACTGTCAAGTTTCCAAGGTCCCA...ATTTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR CAA 90 bp TGCTGTCAAGTCCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCGTGTTGTCTGCTATGTaGTTCAGTGCTGGCTTTTCT +
Preference number: 5 (lower is better)
Translates to: CCQVPTAATETHVLLSIIVLSAM*FSAGFS
Trigger: AGAAAAGCCAGCACTGAACAACATAGCAGACAACAC...GATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGGACTTGACAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR CAA 90 bp CCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAAATGCTACTGAAACCACCCACAGCTTaGTGGGCAAGTTGGGGATGG +
Preference number: 5 (lower is better)
Translates to: PQKRMCCFPSSLAFKMLLKPPTA*WASWGW
Trigger: CCATCCCCAACTTGCCCACAAAGCTGTGGGTGGTTT...CAGTAGCATTTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
CDS TCA 90 bp CGGTATAACCATATTATCCCTCTTCTCGCCATACACCTGCTGTGCTaGAATAGCCCGCTGAAGATGATGTTCCGACTCCTCTTCCTTCTC +
Preference number: 5 (lower is better)
Translates to: RYNHIIPLLAIHLLC*NSPLKMMFRLLFLL
Trigger: GAGAAGGAAGAGGAGTCGGAACATCATCTTCAGCGGGCTATTTCAGCACAGCAGGTGTATGGCGAGAAGAGGGATAATATGGTTATACCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000495790.1
ENST00000667706.1
CDS GCA 90 bp TCGGCTGTAAATGCAAAGTGTGCTGAACCACTGCTACTTTTACTTTaGGTAGAGGTACTGCATGTCTGGGTCCCAGGTTGTGCTGTTCCT +
Preference number: 5 (lower is better)
Translates to: SAVNAKCAEPLLLLL*VEVLHVWVPGCAVP
Trigger: AGGAACAGCACAACCTGGGACCCAGACATGCAGTACCTCTACGCAAAGTAAAAGTAGCAGTGGTTCAGCACACTTTGCATTTACAGCCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000479380.2
CDS-3UTR CAA 90 bp ATTGCTGTCAAGTCCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATTCAGATCTTTAGCATaGAAGACTGGCAGTGCAGCA +
Preference number: 5 (lower is better)
Translates to: IAVKSPQLPQKRMCCFPSFRSLA*KTGSAA
Trigger: TGCTGCACTGCCAGTCTTCAATGCTAAAGATCTGAA...TGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGGACTTGACAGCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR CAA 90 bp ATGAGCATTGCTGTCAAGTCCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTTTCAGATCTTTAGCATaGAAGACTGGCAGTGCAGCA +
Preference number: 5 (lower is better)
Translates to: MSIAVKSPQLPQKRMCCFFRSLA*KTGSAA
Trigger: TGCTGCACTGCCAGTCTTCAATGCTAAAGATCTGAA...AAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGGACTTGACAGCAATGCTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR CAA 90 bp ATTGCTGTCAAGTCCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCAAAATCCAATACACCTTaGGGGTACGGTGAGAGTAGT +
Preference number: 5 (lower is better)
Translates to: IAVKSPQLPQKRMCCFPSKSNTP*GYGESS
Trigger: ACTACTCTCACCGTACCCCAAAGGTGTATTGGATTT...TGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGGACTTGACAGCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR CAA 90 bp CACTTTTTGGTGTGGAAGGAAATGGGACTACTGGGCTGTTCGCAGAGCAGCAACAAATCCAATACACCTTaGGGGTACGGTGAGAGTAGT +
Preference number: 5 (lower is better)
Translates to: HFLVWKEMGLLGCSQSSNKSNTP*GYGESS
Trigger: ACTACTCTCACCGTACCCCAAAGGTGTATTGGATTT...GTTGCTGCTCTGCGAACAGCCCAGTAGTCCCATTTCCTTCCACACCAAAAAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
CDS-3UTR CAA 90 bp AGTCCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATACTGCTACTTTTACTTaGCGTAGAGGTACTGCATGT +
Preference number: 5 (lower is better)
Translates to: SPHSCHRNACAAFHHPLHTATFT*RRGTAC
Trigger: ACATGCAGTACCTCTACGCAAAGTAAAAGTAGCAGT...ATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR CAA 90 bp CCACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAACTGCCGTTGATGGACTaGTATGTACAAGTGCTGTTG +
Preference number: 5 (lower is better)
Translates to: PQLPQKRMCCFPSSLAFKLPLMD*YVQVLL
Trigger: CAACAGCACTTGTACATACAAGTCCATCAACGGCAG...TTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR CAA 90 bp CCACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAACAATCAGAACCTGAGTaGTTGCAGAATTGGCAGCAG +
Preference number: 5 (lower is better)
Translates to: PQLPQKRMCCFPSSLAFKQSEPE*LQNWQQ
Trigger: CTGCTGCCAATTCTGCAACAACTCAGGTTCTGATTG...TTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR CAA 90 bp CACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAAATGGAAACTTGACAGTTaGCTGCAGCGGCCAGCTTTA +
Preference number: 5 (lower is better)
Translates to: HSCHRNACAAFHHPLHSKWKLDS*LQRPAL
Trigger: TAAAGCTGGCCGCTGCAGCAAACTGTCAAGTTTCCA...TTTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR CAA 90 bp GCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAAATGCTTGGAAACTTGACAGTTaGCTGCAGCGGCCAGCTTTA +
Preference number: 5 (lower is better)
Translates to: AATETHVLLSIIPCIQNAWKLDS*LQRPAL
Trigger: TAAAGCTGGCCGCTGCAGCAAACTGTCAAGTTTCCA...AGCATTTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR CAA 90 bp CAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAAATGCTACTGATGTGGGACCTTGGAAACTaGACAGTTTGCTGCAGCGGC +
Preference number: 5 (lower is better)
Translates to: QKRMCCFPSSLAFKMLLMWDLGN*TVCCSG
Trigger: GCCGCTGCAGCAAACTGTCAAGTTTCCAAGGTCCCA...CATCAGTAGCATTTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR CAA 90 bp CTGTCAAGTCCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCATTCATGATTTTCCCTaGGAACTGAATCTACAGAGG +
Preference number: 5 (lower is better)
Translates to: LSSPHSCHRNACAAFHHPIHDFP*ELNLQR
Trigger: CCTCTGTAGATTCAGTTCCAAGGGAAAATCATGAAT...GGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGGACTTGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR CAA 90 bp CCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCACACATCTCACACTCTTaGTTGCAATTGATTTCCCTC +
Preference number: 5 (lower is better)
Translates to: PHSCHRNACAAFHHPLHSHISHS*LQLISL
Trigger: GAGGGAAATCAATTGCAACAAAGAGTGTGAGATGTG...TGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS TCA 90 bp AAAACCTGGGAGAGAGGTTCTTCGTCTGAGCTGGGAAAGTCATACTaGTTCAGATCTTTAGCATTGAAGACTGGCAGTGCAGCAGGACTC +
Preference number: 5 (lower is better)
Translates to: KTWERGSSSELGKSY*FRSLALKTGSAAGL
Trigger: GAGTCCTGCTGCACTGCCAGTCTTCAATGCTAAAGATCTGAATCAGTATGACTTTCCCAGCTCAGACGAAGAACCTCTCTCCCAGGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000479380.2
ENST00000495790.1
ENST00000667706.1
CDS GCA 90 bp ACAGTCAACATACCAAAGTGTGCTGAACCACTGCTACTTTTACTTTaGGTAGAGGTACTGCATGTCTGGGTCCCAGGTTGTGCTGTTCCT +
Preference number: 5 (lower is better)
Translates to: TVNIPKCAEPLLLLL*VEVLHVWVPGCAVP
Trigger: AGGAACAGCACAACCTGGGACCCAGACATGCAGTACCTCTACGCAAAGTAAAAGTAGCAGTGGTTCAGCACACTTTGGTATGTTGACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495790.1
CDS-3UTR CAA 90 bp AACTCAAGGACCCAGAGGGGAACCAAGTTATGTTATACCATTTACAAAATACCAAGCAGGACTCGTCTGTaGGGGAGTAGCAGCGGCAGA +
Preference number: 5 (lower is better)
Translates to: NSRTQRGTKLCYTIYKIPSRTRL*GSSSGR
Trigger: TCTGCCGCTGCTACTCCCCAACAGACGAGTCCTGCT...TGGTATTTTGTAAATGGTATAACATAACTTGGTTCCCCTCTGGGTCCTTGAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR CAA 90 bp TCCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCATTTGTCCGAGGTATTaGTTTCTGAGGTATTGGCAA +
Preference number: 5 (lower is better)
Translates to: SPQLPQKRMCCFPSSLAFICPRY*FLRYWQ
Trigger: TTGCCAATACCTCAGAAACAAATACCTCGGACAAAT...GAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR CAA 90 bp GTCCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTATTTGTCCGAGGTATTaGTTTCTGAGGTATTGGCAA +
Preference number: 5 (lower is better)
Translates to: VPTAATETHVLLSIIPCIICPRY*FLRYWQ
Trigger: TTGCCAATACCTCAGAAACAAATACCTCGGACAAAT...AATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR CAA 90 bp ATGAGCATTGCTGTCAAGTCCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTACTGCTACTTTTACTTaGCGTAGAGGTACTGCATGT +
Preference number: 5 (lower is better)
Translates to: MSIAVKSPQLPQKRMCCFTATFT*RRGTAC
Trigger: ACATGCAGTACCTCTACGCAAAGTAAAAGTAGCAGT...AAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGGACTTGACAGCAATGCTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR CAA 90 bp TCCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCACATCATCCTTCATCTaGAATCCCATCAGTTGTTCT +
Preference number: 5 (lower is better)
Translates to: SPQLPQKRMCCFPSSLAFTSSFI*NPISCS
Trigger: AGAACAACTGATGGGATTCAAGATGAAGGATGATGT...GAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR CAA 90 bp ATTGCTGTCAAGTCCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCAATCTCACACTCTTTGTaGCAATTGATTTCCCTCCCA +
Preference number: 5 (lower is better)
Translates to: IAVKSPQLPQKRMCCFPSISHSL*QLISLP
Trigger: TGGGAGGGAAATCAATTGCAACAAAGAGTGTGAGAT...TGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGGACTTGACAGCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS GCA 90 bp AGGGATGATGGGGATGGCATAAGTAGGTTTCATTGGCTGTCTCTGTaGCATAACCTCAGACATGATCTCTCCATTGTAGTCGCCCAAATT +
Preference number: 5 (lower is better)
Translates to: RDDGDGISRFHWLSL*HNLRHDLSIVVAQI
Trigger: AATTTGGGCGACTACAATGGAGAGATCATGTCTGAGGTTATGGCACAGAGACAGCCAATGAAACCTACTTATGCCATCCCCATCATCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000479380.2
ENST00000495790.1
ENST00000667706.1
CDS CCA 90 bp GCTGAACCACTGCTACTTTTACTTTGCGTAGAGGTACTGCATGTCTaGGTCCCAGGTTGTGCTGTTCCTGTTCGGTTTATACTCCTATAT +
Preference number: 5 (lower is better)
Translates to: AEPLLLLLCVEVLHV*VPGCAVPVRFILLY
Trigger: ATATAGGAGTATAAACCGAACAGGAACAGCACAACCTGGGACCCAGACATGCAGTACCTCTACGCAAAGTAAAAGTAGCAGTGGTTCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000479380.2
ENST00000495790.1
ENST00000667706.1
CDS-3UTR CAA 90 bp CTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAAATGCTACCACATAAGGATCATTaGTGCTGGAACCATCTCGCT +
Preference number: 5 (lower is better)
Translates to: LPQKRMCCFPSSLAFKMLPHKDH*CWNHLA
Trigger: AGCGAGATGGTTCCAGCACAAATGATCCTTATGTGG...TAGCATTTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR CAA 90 bp CCACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAAACTATTTGCTTGCTGTaGCTGAATTTGTGCAAGCTG +
Preference number: 5 (lower is better)
Translates to: PQLPQKRMCCFPSSLAFKTICLL*LNLCKL
Trigger: CAGCTTGCACAAATTCAGCAACAGCAAGCAAATAGT...TTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR CAA 90 bp ATGAGCATTGCTGTCAAGTCCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTGGAATTACTATTTGCTaGCTGTTGCTGAATTTGTGC +
Preference number: 5 (lower is better)
Translates to: MSIAVKSPQLPQKRMCCFGITIC*LLLNLC
Trigger: GCACAAATTCAGCAACAGCAAGCAAATAGTAATTCC...AAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGGACTTGACAGCAATGCTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR CAA 90 bp ATTGCTGTCAAGTCCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCAGGAATTACTATTTGCTaGCTGTTGCTGAATTTGTGC +
Preference number: 5 (lower is better)
Translates to: IAVKSPQLPQKRMCCFPSGITIC*LLLNLC
Trigger: GCACAAATTCAGCAACAGCAAGCAAATAGTAATTCC...TGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGGACTTGACAGCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR CAA 90 bp GTCCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTTGGAGGAATTACTATTaGCTTGCTGTTGCTGAATTT +
Preference number: 5 (lower is better)
Translates to: VPTAATETHVLLSIIPCIWRNYY*LAVAEF
Trigger: AAATTCAGCAACAGCAAGCAAATAGTAATTCCTCCA...AATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR CAA 90 bp TTGCTGTCAAGTCCCCACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATACATCATCCTTCATCTaGAATCCCATCAGTTGTTCT +
Preference number: 5 (lower is better)
Translates to: LLSSPHSCHRNACAAFHHTSSFI*NPISCS
Trigger: AGAACAACTGATGGGATTCAAGATGAAGGATGATGT...ATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGTGGGGACTTGACAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR CAA 90 bp TGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAAATGCTACCTGCCGTTGATGGACTaGTATGTACAAGTGCTGTTG +
Preference number: 5 (lower is better)
Translates to: CHRNACAAFHHPLHSKCYLPLMD*YVQVLL
Trigger: CAACAGCACTTGTACATACAAGTCCATCAACGGCAG...GTAGCATTTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR CAA 90 bp GAAGGCTGTAACAAAGCTGAACCTGCCGTTGATGGACTTGTATGTACAAGTGCTCTGCCGTTGATGGACTaGTATGTACAAGTGCTGTTG +
Preference number: 5 (lower is better)
Translates to: EGCNKAEPAVDGLVCTSALPLMD*YVQVLL
Trigger: CAACAGCACTTGTACATACAAGTCCATCAACGGCAG...AGCACTTGTACATACAAGTCCATCAACGGCAGGTTCAGCTTTGTTACAGCCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667706.1
CDS-3UTR CAA 90 bp ACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAAATATTGGCAGCAGTTACTaGATGACTCAGTGCACTGTG +
Preference number: 5 (lower is better)
Translates to: TAATETHVLLSIIPCIQNIGSSY*MTQCTV
Trigger: CACAGTGCACTGAGTCATCAAGTAACTGCTGCCAAT...ATTTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR CAA 90 bp TTTACAAAATACCAAGGAGTCCACAGCTACCTAACACATTTACTACAGCACAGGGAAGGCACCCGATATTaGTGGTTCTGGCCTTGCAGC +
Preference number: 5 (lower is better)
Translates to: FTKYQGVHSYLTHLLQHREGTRY*WFWPCS
Trigger: GCTGCAAGGCCAGAACCACAAATATCGGGTGCCTTC...CCTGTGCTGTAGTAAATGTGTTAGGTAGCTGTGGACTCCTTGGTATTTTGTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
CDS-3UTR CAA 90 bp TGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAAATGCTACCAGGAGAGTTCATCATaGTCACTGTCATGTAGGGAT +
Preference number: 5 (lower is better)
Translates to: CHRNACAAFHHPLHSKCYQESSS*SLSCRD
Trigger: ATCCCTACATGACAGTGACAATGATGAACTCTCCTG...GTAGCATTTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR CAA 90 bp GCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAAATGCTACTATTTGCTTGCTGTaGCTGAATTTGTGCAAGCTG +
Preference number: 5 (lower is better)
Translates to: AATETHVLLSIIPCIQNATICLL*LNLCKL
Trigger: CAGCTTGCACAAATTCAGCAACAGCAAGCAAATAGT...AGCATTTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR CAA 90 bp TGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAAATGCTACTCAGAACCTGAGTTGTaGCAGAATTGGCAGCAGTTA +
Preference number: 5 (lower is better)
Translates to: CHRNACAAFHHPLHSKCYSEPEL*QNWQQL
Trigger: TAACTGCTGCCAATTCTGCAACAACTCAGGTTCTGA...GTAGCATTTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR CAA 90 bp AACCTTAAGGATAATGTATGCCATTGGACTGGGCATTCAGACTTCGGTACTGACAGCTTTGTGGGCAAGTaGGGGATGGAAAGATTCAAG +
Preference number: 5 (lower is better)
Translates to: NLKDNVCHWTGHSDFGTDSFVGK*GMERFK
Trigger: CTTGAATCTTTCCATCCCCAACTTGCCCACAAAGCT...GTCAGTACCGAAGTCTGAATGCCCAGTCCAATGGCATACATTATCCTTAAGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
CDS TCA 90 bp CTGTTGATGTTGCTGGTATTGTTCGGCTGTAAATGCAAAGTGTGCTaGACCACTGCTACTTTTACTTTGCGTAGAGGTACTGCATGTCTG +
Preference number: 5 (lower is better)
Translates to: LLMLLVLFGCKCKVC*TTATFTLRRGTACL
Trigger: CAGACATGCAGTACCTCTACGCAAAGTAAAAGTAGCAGTGGTTCAGCACACTTTGCATTTACAGCCGAACAATACCAGCAACATCAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000479380.2
CDS-3UTR CAA 90 bp CAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAAATGCTACTGATGCAGGAGAGTTCATCATaGTCACTGTCATGTAGGGAT +
Preference number: 5 (lower is better)
Translates to: QKRMCCFPSSLAFKMLLMQESSS*SLSCRD
Trigger: ATCCCTACATGACAGTGACAATGATGAACTCTCCTG...CATCAGTAGCATTTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR CAA 90 bp GCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAAATGCTACATCATCCTTCATCTaGAATCCCATCAGTTGTTCT +
Preference number: 5 (lower is better)
Translates to: AATETHVLLSIIPCIQNATSSFI*NPISCS
Trigger: AGAACAACTGATGGGATTCAAGATGAAGGATGATGT...AGCATTTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR CAA 90 bp ACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAAATGCTACTGATATTGGCAGCAGTTACTaGATGACTCAGTGCACTGTG +
Preference number: 5 (lower is better)
Translates to: TETHVLLSIIPCIQNATDIGSSY*MTQCTV
Trigger: CACAGTGCACTGAGTCATCAAGTAACTGCTGCCAAT...ATCAGTAGCATTTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR CAA 90 bp AAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAAATGCTACTGATGCATCAATCAGAACCTGAGTaGTTGCAGAATTGGCAGCAG +
Preference number: 5 (lower is better)
Translates to: KRMCCFPSSLAFKMLLMHQSEPE*LQNWQQ
Trigger: CTGCTGCCAATTCTGCAACAACTCAGGTTCTGATTG...ATGCATCAGTAGCATTTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR CAA 90 bp TTAAGGATAATGTATGCCATTGGACTGGGCATTCAGACTTCGGTACTGACAAAGCAATCAGAACCTGAGTaGTTGCAGAATTGGCAGCAG +
Preference number: 5 (lower is better)
Translates to: LRIMYAIGLGIQTSVLTKQSEPE*LQNWQQ
Trigger: CTGCTGCCAATTCTGCAACAACTCAGGTTCTGATTG...CTTTGTCAGTACCGAAGTCTGAATGCCCAGTCCAATGGCATACATTATCCTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
CDS-3UTR CAA 90 bp TCAAGGACCCAGAGGGGAACCAAGTTATGTTATACCATTTACAAAATACCAAGGTGGAAACTTGACAGTTaGCTGCAGCGGCCAGCTTTA +
Preference number: 5 (lower is better)
Translates to: SRTQRGTKLCYTIYKIPRWKLDS*LQRPAL
Trigger: TAAAGCTGGCCGCTGCAGCAAACTGTCAAGTTTCCA...CCTTGGTATTTTGTAAATGGTATAACATAACTTGGTTCCCCTCTGGGTCCTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR CAA 90 bp TGGCTGTTTTTAGAAACTGGAATGATGATACACGTACAGCAATTACTGCATTCTTGGGACCTTGGAAACTaGACAGTTTGCTGCAGCGGC +
Preference number: 5 (lower is better)
Translates to: WLFLETGMMIHVQQLLHSWDLGN*TVCCSG
Trigger: GCCGCTGCAGCAAACTGTCAAGTTTCCAAGGTCCCA...AGAATGCAGTAATTGCTGTACGTGTATCATCATTCCAGTTTCTAAAAACAGCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
CDS-3UTR CAA 90 bp ACAGCTGCCACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAAATCACATCTCACACTCTTaGTTGCAATTGATTTCCCTC +
Preference number: 5 (lower is better)
Translates to: TAATETHVLLSIIPCIQNHISHS*LQLISL
Trigger: GAGGGAAATCAATTGCAACAAAGAGTGTGAGATGTG...ATTTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGTGGCAGCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR CAA 90 bp AAGCTACGTCACCTCCATCGCTACTGTGTTGTCTGCTATGTTGTTCAGTGCTGGTTATGCTACTTATGTTaGTCTATGGAGAGCTCAGTT +
Preference number: 5 (lower is better)
Translates to: KLRHLHRYCVVCYVVQCWLCYLC*SMESSV
Trigger: AACTGAGCTCTCCATAGACAAACATAAGTAGCATAA...CCAGCACTGAACAACATAGCAGACAACACAGTAGCGATGGAGGTGACGTAGCTT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667706.1
CDS CCA 90 bp GCTATTAGTAATAGGGATGATGGGGATGGCATAAGTAGGTTTCATTaGCTGTCTCTGTGCCATAACCTCAGACATGATCTCTCCATTGTA +
Preference number: 5 (lower is better)
Translates to: AISNRDDGDGISRFH*LSLCHNLRHDLSIV
Trigger: TACAATGGAGAGATCATGTCTGAGGTTATGGCACAGAGACAGCCAATGAAACCTACTTATGCCATCCCCATCATCCCTATTACTAATAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000479380.2
ENST00000495790.1
ENST00000667706.1
CDS-3UTR CAA 90 bp CATGCACATGATGTGATGACACTTCATCTCTATACAATCTCACATCTCACACTCCCACATAAGGATCATTaGTGCTGGAACCATCTCGCT +
Preference number: 5 (lower is better)
Translates to: HAHDVMTLHLYTISHLTLPHKDH*CWNHLA
Trigger: AGCGAGATGGTTCCAGCACAAATGATCCTTATGTGG...GAGTGTGAGATGTGAGATTGTATAGAGATGAAGTGTCATCACATCATGTGCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR CAA 90 bp AAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAAATGCTACTGATGCATTTCAGATCTTTAGCATaGAAGACTGGCAGTGCAGCA +
Preference number: 5 (lower is better)
Translates to: KRMCCFPSSLAFKMLLMHFRSLA*KTGSAA
Trigger: TGCTGCACTGCCAGTCTTCAATGCTAAAGATCTGAA...ATGCATCAGTAGCATTTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR CAA 90 bp GTTCCCAATCAGAACCTGAGTTGTTGCAGAATTGGCAGCAGTTACTTGATGACTACTGCTACTTTTACTTaGCGTAGAGGTACTGCATGT +
Preference number: 5 (lower is better)
Translates to: VPNQNLSCCRIGSSYLMTTATFT*RRGTAC
Trigger: ACATGCAGTACCTCTACGCAAAGTAAAAGTAGCAGT...AGTCATCAAGTAACTGCTGCCAATTCTGCAACAACTCAGGTTCTGATTGGGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000667706.1
CDS-3UTR CAA 90 bp AAGGAAATGGGACTACTGGGCTGTTCGCAGAGCAGCAACATAATATTAGTGCTTACTATTTGCTTGCTGTaGCTGAATTTGTGCAAGCTG +
Preference number: 5 (lower is better)
Translates to: KEMGLLGCSQSSNIILVLTICLL*LNLCKL
Trigger: CAGCTTGCACAAATTCAGCAACAGCAAGCAAATAGT...AAGCACTAATATTATGTTGCTGCTCTGCGAACAGCCCAGTAGTCCCATTTCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
CDS-3UTR CAA 90 bp AGTTGTTGCAGAATTGGCAGCAGTTACTTGATGACTCAGTGCACTGTGGGAACTACATCATCCTTCATCTaGAATCCCATCAGTTGTTCT +
Preference number: 5 (lower is better)
Translates to: SCCRIGSSYLMTQCTVGTTSSFI*NPISCS
Trigger: AGAACAACTGATGGGATTCAAGATGAAGGATGATGT...AGTTCCCACAGTGCACTGAGTCATCAAGTAACTGCTGCCAATTCTGCAACAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667706.1
CDS-3UTR CAA 90 bp AAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAAATGCTACTGATGCATAAGCTGAACCTGCCGTaGATGGACTTGTATGTACAA +
Preference number: 5 (lower is better)
Translates to: KRMCCFPSSLAFKMLLMHKLNLP*MDLYVQ
Trigger: TTGTACATACAAGTCCATCAACGGCAGGTTCAGCTT...ATGCATCAGTAGCATTTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR CAA 90 bp TTCACAGAAGAGAGGTCAAATATTTCCAAAGGAAGGCACCCGATATTTGTGGTTATTGGCAGCAGTTACTaGATGACTCAGTGCACTGTG +
Preference number: 5 (lower is better)
Translates to: FTEERSNISKGRHPIFVVIGSSY*MTQCTV
Trigger: CACAGTGCACTGAGTCATCAAGTAACTGCTGCCAAT...AACCACAAATATCGGGTGCCTTCCTTTGGAAATATTTGACCTCTCTTCTGTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
CDS-3UTR CAA 90 bp CTGATGAAGGTACAGTTAATCGAATGTTGTTCCCAATCAGAACCTGAGTTGTTGCAATCAGAACCTGAGTaGTTGCAGAATTGGCAGCAG +
Preference number: 5 (lower is better)
Translates to: LMKVQLIECCSQSEPELLQSEPE*LQNWQQ
Trigger: CTGCTGCCAATTCTGCAACAACTCAGGTTCTGATTG...CAACAACTCAGGTTCTGATTGGGAACAACATTCGATTAACTGTACCTTCATCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667706.1
CDS-3UTR CAA 90 bp GAAGGCTGTAACAAAGCTGAACCTGCCGTTGATGGACTTGTATGTACAAGTGCTATTCATGATTTTCCCTaGGAACTGAATCTACAGAGG +
Preference number: 5 (lower is better)
Translates to: EGCNKAEPAVDGLVCTSAIHDFP*ELNLQR
Trigger: CCTCTGTAGATTCAGTTCCAAGGGAAAATCATGAAT...AGCACTTGTACATACAAGTCCATCAACGGCAGGTTCAGCTTTGTTACAGCCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000667706.1
CDS-3UTR CAA 90 bp ACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAAATGCTACTGATGTGTTGTCTGCTATGTaGTTCAGTGCTGGCTTTTCT +
Preference number: 5 (lower is better)
Translates to: TETHVLLSIIPCIQNATDVLSAM*FSAGFS
Trigger: AGAAAAGCCAGCACTGAACAACATAGCAGACAACAC...ATCAGTAGCATTTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR CAA 90 bp AAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAAATGCTACTGATGCATGTGTTGTCTGCTATGTaGTTCAGTGCTGGCTTTTCT +
Preference number: 5 (lower is better)
Translates to: KRMCCFPSSLAFKMLLMHVLSAM*FSAGFS
Trigger: AGAAAAGCCAGCACTGAACAACATAGCAGACAACAC...ATGCATCAGTAGCATTTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR CAA 90 bp AAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAAATGCTACTGATGCATTCCATCGCTACTGTGTaGTCTGCTATGTTGTTCAGT +
Preference number: 5 (lower is better)
Translates to: KRMCCFPSSLAFKMLLMHSIATV*SAMLFS
Trigger: ACTGAACAACATAGCAGACAACACAGTAGCGATGGA...ATGCATCAGTAGCATTTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR CAA 90 bp AACTCAAGGACCCAGAGGGGAACCAAGTTATGTTATACCATTTACAAAATACCATTTGTGGTTCTGGCCTaGCAGCCTTCTGGAGAATCT +
Preference number: 5 (lower is better)
Translates to: NSRTQRGTKLCYTIYKIPFVVLA*QPSGES
Trigger: AGATTCTCCAGAAGGCTGCAAGGCCAGAACCACAAA...TGGTATTTTGTAAATGGTATAACATAACTTGGTTCCCCTCTGGGTCCTTGAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
CDS-3UTR CAA 90 bp TTCACAGAAGAGAGGTCAAATATTTCCAAAGGAAGGCACCCGATATTTGTGGTTAGGATCTGTGGGCTTTaGGGGGAAATCGGAGAAATA +
Preference number: 5 (lower is better)
Translates to: FTEERSNISKGRHPIFVVRICGL*GEIGEI
Trigger: TATTTCTCCGATTTCCCCCAAAAGCCCACAGATCCT...AACCACAAATATCGGGTGCCTTCCTTTGGAAATATTTGACCTCTCTTCTGTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375110.6
CDS TCA 90 bp ATTCAGGCGAAAGCCACTTTTCTGCTGGTTAGATGCAAGGTTCTATaGCAACAGTTGGTAATTAGAGATGAACTCTGGTGGGAAACAATG +
Preference number: 5 (lower is better)
Translates to: IQAKATFLLVRCKVL*QQLVIRDELWWETM
Trigger: CATTGTTTCCCACCAGAGTTCATCTCTAATTACCAACTGTTGTCATAGAACCTTGCATCTAACCAGCAGAAAAGTGGCTTTCGCCTGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479380.2
CDS CCA 90 bp GGGATAATCATAAGACAGACAAATCCCTCACCTGTGATGTGTTGGTaGAGGAATTACTATTTGCTTGCTGTTGCTGAATTTGTGCAAGCT +
Preference number: 5 (lower is better)
Translates to: GIIIRQTNPSPVMCW*RNYYLLAVAEFVQA
Trigger: AGCTTGCACAAATTCAGCAACAGCAAGCAAATAGTAATTCCTCCACCAACACATCACAGGTGAGGGATTTGTCTGTCTTATGATTATCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479380.2
CDS-3UTR CAA 90 bp AAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAAATGCTACTGATGCATACTGCTACTTTTACTTaGCGTAGAGGTACTGCATGT +
Preference number: 5 (lower is better)
Translates to: KRMCCFPSSLAFKMLLMHTATFT*RRGTAC
Trigger: ACATGCAGTACCTCTACGCAAAGTAAAAGTAGCAGT...ATGCATCAGTAGCATTTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR CAA 90 bp CAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAAATGCTACTGATGGGAATTACTATTTGCTaGCTGTTGCTGAATTTGTGC +
Preference number: 5 (lower is better)
Translates to: QKRMCCFPSSLAFKMLLMGITIC*LLLNLC
Trigger: GCACAAATTCAGCAACAGCAAGCAAATAGTAATTCC...CATCAGTAGCATTTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR CAA 90 bp TACACAGAAAACTCAAGGACCCAGAGGGGAACCAAGTTATGTTATACCATTTACAAGCTGAACCTGCCGTaGATGGACTTGTATGTACAA +
Preference number: 5 (lower is better)
Translates to: YTENSRTQRGTKLCYTIYKLNLP*MDLYVQ
Trigger: TTGTACATACAAGTCCATCAACGGCAGGTTCAGCTT...GTAAATGGTATAACATAACTTGGTTCCCCTCTGGGTCCTTGAGTTTTCTGTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR CAA 90 bp TTTACAAAATACCAAGGAGTCCACAGCTACCTAACACATTTACTACAGCACAGGGTGTTGTCTGCTATGTaGTTCAGTGCTGGCTTTTCT +
Preference number: 5 (lower is better)
Translates to: FTKYQGVHSYLTHLLQHRVLSAM*FSAGFS
Trigger: AGAAAAGCCAGCACTGAACAACATAGCAGACAACAC...CCTGTGCTGTAGTAAATGTGTTAGGTAGCTGTGGACTCCTTGGTATTTTGTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR CAA 90 bp CATGCACATGATGTGATGACACTTCATCTCTATACAATCTCACATCTCACACTCTCCATCGCTACTGTGTaGTCTGCTATGTTGTTCAGT +
Preference number: 5 (lower is better)
Translates to: HAHDVMTLHLYTISHLTLSIATV*SAMLFS
Trigger: ACTGAACAACATAGCAGACAACACAGTAGCGATGGA...GAGTGTGAGATGTGAGATTGTATAGAGATGAAGTGTCATCACATCATGTGCATG
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR CAA 90 bp TTCACAGAAGAGAGGTCAAATATTTCCAAAGGAAGGCACCCGATATTTGTGGTTTCCATCGCTACTGTGTaGTCTGCTATGTTGTTCAGT +
Preference number: 5 (lower is better)
Translates to: FTEERSNISKGRHPIFVVSIATV*SAMLFS
Trigger: ACTGAACAACATAGCAGACAACACAGTAGCGATGGA...AACCACAAATATCGGGTGCCTTCCTTTGGAAATATTTGACCTCTCTTCTGTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
CDS-3UTR CAA 90 bp ACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAAATGCTACTGATCACATCTCACACTCTTaGTTGCAATTGATTTCCCTC +
Preference number: 5 (lower is better)
Translates to: TETHVLLSIIPCIQNATDHISHS*LQLISL
Trigger: GAGGGAAATCAATTGCAACAAAGAGTGTGAGATGTG...ATCAGTAGCATTTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS TCA 90 bp GAGAAAGATTTGTCCGAGGTATTTGTTTCTGAGGTATTGGCAAACTaGTTGACTGGAGAATGTTGTGGTGAGGAAAGCATTTCCAAATCC +
Preference number: 5 (lower is better)
Translates to: EKDLSEVFVSEVLAN*LTGECCGEESISKS
Trigger: GGATTTGGAAATGCTTTCCTCACCACAACATTCTCCAGTCAATCAGTTTGCCAATACCTCAGAAACAAATACCTCGGACAAATCTTTCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000479380.2
ENST00000495790.1
ENST00000667706.1
CDS-3UTR CAA 90 bp TTACTTGTCCTAATGATAGTAGACCAGGAAGATCCCCATTTAATAGTACATTCCCCACATAAGGATCATTaGTGCTGGAACCATCTCGCT +
Preference number: 5 (lower is better)
Translates to: LLVLMIVDQEDPHLIVHSPHKDH*CWNHLA
Trigger: AGCGAGATGGTTCCAGCACAAATGATCCTTATGTGG...GGAATGTACTATTAAATGGGGATCTTCCTGGTCTACTATCATTAGGACAAGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
CDS-3UTR CAA 90 bp GATACACAGAAAACTCAAGGACCCAGAGGGGAACCAAGTTATGTTATACCATTTACTATTTGCTTGCTGTaGCTGAATTTGTGCAAGCTG +
Preference number: 5 (lower is better)
Translates to: DTQKTQGPRGEPSYVIPFTICLL*LNLCKL
Trigger: CAGCTTGCACAAATTCAGCAACAGCAAGCAAATAGT...AAATGGTATAACATAACTTGGTTCCCCTCTGGGTCCTTGAGTTTTCTGTGTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR CAA 90 bp TGGCTGTTTTTAGAAACTGGAATGATGATACACGTACAGCAATTACTGCATTCTCTGCCGTTGATGGACTaGTATGTACAAGTGCTGTTG +
Preference number: 5 (lower is better)
Translates to: WLFLETGMMIHVQQLLHSLPLMD*YVQVLL
Trigger: CAACAGCACTTGTACATACAAGTCCATCAACGGCAG...AGAATGCAGTAATTGCTGTACGTGTATCATCATTCCAGTTTCTAAAAACAGCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
CDS-3UTR CAA 90 bp GAGCAGCAACATAATATTAGTGCTTTAAGTACCAGAAACCACCCACAGCTTTGTATCTCACACTCTTTGTaGCAATTGATTTCCCTCCCA +
Preference number: 5 (lower is better)
Translates to: EQQHNISALSTRNHPQLCISHSL*QLISLP
Trigger: TGGGAGGGAAATCAATTGCAACAAAGAGTGTGAGAT...ACAAAGCTGTGGGTGGTTTCTGGTACTTAAAGCACTAATATTATGTTGCTGCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
CDS GCA 90 bp AAATTCCCCAGGATATATAGACTCATAGTAAGCAATATTACTTTCTaGCTCTGGGACCGGTATAACCATATTATCCCTCTTCTCGCCATA +
Preference number: 5 (lower is better)
Translates to: KFPRIYRLIVSNITF*LWDRYNHIIPLLAI
Trigger: TATGGCGAGAAGAGGGATAATATGGTTATACCGGTCCCAGAGGCAGAAAGTAATATTGCTTACTATGAGTCTATATATCCTGGGGAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000479380.2
ENST00000495790.1
ENST00000667706.1
CDS-3UTR CAA 90 bp GATACACAGAAAACTCAAGGACCCAGAGGGGAACCAAGTTATGTTATACCATTTATTTGTCCGAGGTATTaGTTTCTGAGGTATTGGCAA +
Preference number: 5 (lower is better)
Translates to: DTQKTQGPRGEPSYVIPFICPRY*FLRYWQ
Trigger: TTGCCAATACCTCAGAAACAAATACCTCGGACAAAT...AAATGGTATAACATAACTTGGTTCCCCTCTGGGTCCTTGAGTTTTCTGTGTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR CAA 90 bp GTTACTTGTCCTAATGATAGTAGACCAGGAAGATCCCCATTTAATAGTACATTCCAGGAGAGTTCATCATaGTCACTGTCATGTAGGGAT +
Preference number: 5 (lower is better)
Translates to: VTCPNDSRPGRSPFNSTFQESSS*SLSCRD
Trigger: ATCCCTACATGACAGTGACAATGATGAACTCTCCTG...GAATGTACTATTAAATGGGGATCTTCCTGGTCTACTATCATTAGGACAAGTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
CDS-3UTR CAA 90 bp ACAGAAACGCATGTGCTGCTTTCCATCATCCCTTGCATTCAAAATGCTACTGATTGGAGGAATTACTATTaGCTTGCTGTTGCTGAATTT +
Preference number: 5 (lower is better)
Translates to: TETHVLLSIIPCIQNATDWRNYY*LAVAEF
Trigger: AAATTCAGCAACAGCAAGCAAATAGTAATTCCTCCA...ATCAGTAGCATTTTGAATGCAAGGGATGATGGAAAGCAGCACATGCGTTTCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR CAA 90 bp GTTACTTGTCCTAATGATAGTAGACCAGGAAGATCCCCATTTAATAGTACATTCTCAGAACCTGAGTTGTaGCAGAATTGGCAGCAGTTA +
Preference number: 5 (lower is better)
Translates to: VTCPNDSRPGRSPFNSTFSEPEL*QNWQQL
Trigger: TAACTGCTGCCAATTCTGCAACAACTCAGGTTCTGA...GAATGTACTATTAAATGGGGATCTTCCTGGTCTACTATCATTAGGACAAGTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
CDS-3UTR CAA 90 bp GACAACATAAACTCCAGTTGTAAGGACTCCATTTGCATACTTGATTTAACACTTAGCTTTGTGGGCAAGTaGGGGATGGAAAGATTCAAG +
Preference number: 5 (lower is better)
Translates to: DNINSSCKDSICILDLTLSFVGK*GMERFK
Trigger: CTTGAATCTTTCCATCCCCAACTTGCCCACAAAGCT...AAGTGTTAAATCAAGTATGCAAATGGAGTCCTTACAACTGGAGTTTATGTTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
CDS TCA 90 bp GGCCTAAAATGCCGCCATCTACATGATTTGATATTGACTAGTATCTaGCTGAGGTCTTTAGAGAAAGATTTGTCCGAGGTATTTGTTTCT +
Preference number: 5 (lower is better)
Translates to: GLKCRHLHDLILTSI*LRSLEKDLSEVFVS
Trigger: AGAAACAAATACCTCGGACAAATCTTTCTCTAAAGACCTCAGTCAGATACTAGTCAATATCAAATCATGTAGATGGCGGCATTTTAGGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000479380.2
ENST00000495790.1
ENST00000667706.1
CDS GCA 90 bp ATACACTGCACCCTGTTTAAATGGCTGTACCTGAAAACCAAGGTATaGAATTCCTTAGGATTAGAAGTCATCAAGTTATACTGTCAAGGA +
Preference number: 5 (lower is better)
Translates to: IHCTLFKWLYLKTKV*NSLGLEVIKLYCQG
Trigger: TCCTTGACAGTATAACTTGATGACTTCTAATCCTAAGGAATTGCATACCTTGGTTTTCAGGTACAGCCATTTAAACAGGGTGCAGTGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469059.2
CDS-3UTR CAA 90 bp TATACCATTTACAAAATACCAAGGAGTCCACAGCTACCTAACACATTTACTACATTCAGATCTTTAGCATaGAAGACTGGCAGTGCAGCA +
Preference number: 5 (lower is better)
Translates to: YTIYKIPRSPQLPNTFTTFRSLA*KTGSAA
Trigger: TGCTGCACTGCCAGTCTTCAATGCTAAAGATCTGAA...TGTAGTAAATGTGTTAGGTAGCTGTGGACTCCTTGGTATTTTGTAAATGGTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR CAA 90 bp TATACCATTTACAAAATACCAAGGAGTCCACAGCTACCTAACACATTTACTACATCCATCGCTACTGTGTaGTCTGCTATGTTGTTCAGT +
Preference number: 5 (lower is better)
Translates to: YTIYKIPRSPQLPNTFTTSIATV*SAMLFS
Trigger: ACTGAACAACATAGCAGACAACACAGTAGCGATGGA...TGTAGTAAATGTGTTAGGTAGCTGTGGACTCCTTGGTATTTTGTAAATGGTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR CAA 90 bp AATGATGATACACGTACAGCAATTACTGCATTCTTCTCCCTTATATCCTTTTCGATTCATGATTTTCCCTaGGAACTGAATCTACAGAGG +
Preference number: 5 (lower is better)
Translates to: NDDTRTAITAFFSLISFSIHDFP*ELNLQR
Trigger: CCTCTGTAGATTCAGTTCCAAGGGAAAATCATGAAT...CGAAAAGGATATAAGGGAGAAGAATGCAGTAATTGCTGTACGTGTATCATCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319778.11
ENST00000375110.6
CDS-3UTR CAA 90 bp TGTTATACCATTTACAAAATACCAAGGAGTCCACAGCTACCTAACACATTTACTATCTCACACTCTTTGTaGCAATTGATTTCCCTCCCA +
Preference number: 5 (lower is better)
Translates to: CYTIYKIPRSPQLPNTFTISHSL*QLISLP
Trigger: TGGGAGGGAAATCAATTGCAACAAAGAGTGTGAGAT...AGTAAATGTGTTAGGTAGCTGTGGACTCCTTGGTATTTTGTAAATGGTATAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS GCA 90 bp TTAATACACTGTGTGCAATCAGGATTTACACTTGTCTTCATCTGTTaGCCTTTCTCACAATTCTACCCCTTGATAATTTATCTGAGGTTT +
Preference number: 5 (lower is better)
Translates to: LIHCVQSGFTLVFIC*PFSQFYPLIIYLRF
Trigger: AAACCTCAGATAAATTATCAAGGGGTAGAATTGTGAGAAAGGGCAACAGATGAAGACAAGTGTAAATCCTGATTGCACACAGTGTATTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495790.1
CDS-3UTR CAA 90 bp TATACCATTTACAAAATACCAAGGAGTCCACAGCTACCTAACACATTTACTACAATTTGTCCGAGGTATTaGTTTCTGAGGTATTGGCAA +
Preference number: 5 (lower is better)
Translates to: YTIYKIPRSPQLPNTFTTICPRY*FLRYWQ
Trigger: TTGCCAATACCTCAGAAACAAATACCTCGGACAAAT...TGTAGTAAATGTGTTAGGTAGCTGTGGACTCCTTGGTATTTTGTAAATGGTATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS-3UTR CAA 90 bp TGTTATACCATTTACAAAATACCAAGGAGTCCACAGCTACCTAACACATTTACTATTCATGATTTTCCCTaGGAACTGAATCTACAGAGG +
Preference number: 5 (lower is better)
Translates to: CYTIYKIPRSPQLPNTFTIHDFP*ELNLQR
Trigger: CCTCTGTAGATTCAGTTCCAAGGGAAAATCATGAAT...AGTAAATGTGTTAGGTAGCTGTGGACTCCTTGGTATTTTGTAAATGGTATAACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS TCA 90 bp CAGTCAATAAGAACGGAGTTGTTTATGTTGATTTACTGTACAGAATaGTGTCTGAGGAAAGACACTGTGTTATGCTACTTATGTTTGTCT +
Preference number: 5 (lower is better)
Translates to: QSIRTELFMLIYCTE*CLRKDTVLCYLCLS
Trigger: AGACAAACATAAGTAGCATAACACAGTGTCTTTCCTCAGACATCATTCTGTACAGTAAATCAACATAAACAACTCCGTTCTTATTGACTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000667706.1
CDS-3UTR CAA 90 bp TATACCATTTACAAAATACCAAGGAGTCCACAGCTACCTAACACATTTACTACATGGAGGAATTACTATTaGCTTGCTGTTGCTGAATTT +
Preference number: 5 (lower is better)
Translates to: YTIYKIPRSPQLPNTFTTWRNYY*LAVAEF
Trigger: AAATTCAGCAACAGCAAGCAAATAGTAATTCCTCCA...TGTAGTAAATGTGTTAGGTAGCTGTGGACTCCTTGGTATTTTGTAAATGGTATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000319778.11
ENST00000375110.6
ENST00000667706.1
CDS GCA 72 bp ATCTGCGGCACGGCCCTGTTTATCGAGGCGTATTCGTaGAGGTCGGGCAGATCCTCACAGCGGAAAACCGGC +
Preference number: 6 (lower is better)
Translates to: ICGTALFIEAYS*RSGRSSQRKTG
Trigger: GCCGGTTTTCCGCTGTGAGGATCTGCCCGACCTGCACGAATACGCCTCGATAAACAGGGCCGTGCCGCAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000469059.2
ENST00000480402.1
ENST00000667706.1
CDS CCA 72 bp TTACTCATCTCAGGCGCAGCAGATACCTCTCCGCTCTaGGGAAACGGCCCCGGCCAGCGGGATCATGGAGAA +
Preference number: 6 (lower is better)
Translates to: LLISGAADTSPL*GNGPGQRDHGE
Trigger: TTCTCCATGATCCCGCTGGCCGGGGCCGTTTCCCCAGAGCGGAGAGGTATCTGCTGCGCCTGAGATGAGTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000469059.2
ENST00000480402.1
ENST00000667706.1
CDS CCA 72 bp GCATTGAAGACTGGCAGTGCAGCAGGACTCGTCTGTTaGGGAGTAGCAGCGGCAGACGATGGTAAGACTTTG +
Preference number: 6 (lower is better)
Translates to: ALKTGSAAGLVC*GVAAADDGKTL
Trigger: CAAAGTCTTACCATCGTCTGCCGCTGCTACTCCCCAACAGACGAGTCCTGCTGCACTGCCAGTCTTCAATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000479380.2
ENST00000495790.1
ENST00000667706.1
CDS GCA 72 bp AATACCTTACCTTCCACCGCGCCCAACCCGTCTTCGTaGAAATCCAATACACCTTTGGGGTACGGTGAGAGT +
Preference number: 6 (lower is better)
Translates to: NTLPSTAPNPSS*KSNTPLGYGES
Trigger: ACTCTCACCGTACCCCAAAGGTGTATTGGATTTGCACGAAGACGGGTTGGGCGCGGTGGAAGGTAAGGTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495790.1
CDS CAA 90 bp GGACTCGTCTGTTGGGGAGTAGCAGCGGCAGACGATGGTAAGACTTaGGGCTTCTTTTCATATTTCCGTTTCGGTCGGATAAGATCGGCT +
Preference number: 6 (lower is better)
Translates to: GLVCWGVAAADDGKT*GFFSYFRFGRIRSA
Trigger: AGCCGATCTTATCCGACCGAAACGGAAATATGAAAAGAAGCCCAAAGTCTTACCATCGTCTGCCGCTGCTACTCCCCAACAGACGAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000479380.2
ENST00000495790.1
ENST00000667706.1
CDS GCA 72 bp ATACTGATTCAGATCTTTAGCATTGAAGACTGGCAGTaGAGCAGGACTCGTCTGTTGGGGAGTAGCAGCGGC +
Preference number: 6 (lower is better)
Translates to: ILIQIFSIEDWQ*SRTRLLGSSSG
Trigger: GCCGCTGCTACTCCCCAACAGACGAGTCCTGCTGCACTGCCAGTCTTCAATGCTAAAGATCTGAATCAGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000479380.2
ENST00000495790.1
ENST00000667706.1
CDS TCA 72 bp CATATTATCCCTCTTCTCGCCATACACCTGCTGTGCTaGAATAGCCCGCTGAAGATGATGTTCCGACTCCTC +
Preference number: 6 (lower is better)
Translates to: HIIPLLAIHLLC*NSPLKMMFRLL
Trigger: GAGGAGTCGGAACATCATCTTCAGCGGGCTATTTCAGCACAGCAGGTGTATGGCGAGAAGAGGGATAATATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000495790.1
ENST00000667706.1
CDS CAA 72 bp TGTTGGGGAGTAGCAGCGGCAGACGATGGTAAGACTTaGGGCTTCTTTTCATATTTCCGTTTCGGTCGGATA +
Preference number: 6 (lower is better)
Translates to: CWGVAAADDGKT*GFFSYFRFGRI
Trigger: TATCCGACCGAAACGGAAATATGAAAAGAAGCCCAAAGTCTTACCATCGTCTGCCGCTGCTACTCCCCAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000479380.2
ENST00000495790.1
ENST00000667706.1
CDS TCA 72 bp AGAGCCAGACAAAACCTGGGAGAGAGGTTCTTCGTCTaGGCTGGGAAAGTCATACTGATTCAGATCTTTAGC +
Preference number: 6 (lower is better)
Translates to: RARQNLGERFFV*AGKVILIQIFS
Trigger: GCTAAAGATCTGAATCAGTATGACTTTCCCAGCTCAGACGAAGAACCTCTCTCCCAGGTTTTGTCTGGCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000479380.2
ENST00000495790.1
ENST00000667706.1
CDS TCA 72 bp GCAAGCTGCTGTTTCTGCATGAGTGCCAGTTGCTGTTaGTGTTGCTGGTATTGTTCGGCTGTAAATGCAAAG +
Preference number: 6 (lower is better)
Translates to: ASCCFCMSASCC*CCWYCSAVNAK
Trigger: CTTTGCATTTACAGCCGAACAATACCAGCAACATCAACAGCAACTGGCACTCATGCAGAAACAGCAGCTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000479380.2
CDS CCA 72 bp AAAGTCATACTGATTCAGATCTTTAGCATTGAAGACTaGCAGTGCAGCAGGACTCGTCTGTTGGGGAGTAGC +
Preference number: 6 (lower is better)
Translates to: KVILIQIFSIED*QCSRTRLLGSS
Trigger: GCTACTCCCCAACAGACGAGTCCTGCTGCACTGCCAGTCTTCAATGCTAAAGATCTGAATCAGTATGACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000479380.2
ENST00000495790.1
ENST00000667706.1
CDS CCA 72 bp CGCCCAACCCGTCTTCGTGCAAATCCAATACACCTTTaGGGTACGGTGAGAGTAGTTAAGCAGTATCTATAT +
Preference number: 6 (lower is better)
Translates to: RPTRLRANPIHL*GTVRVVKQYLY
Trigger: ATATAGATACTGCTTAACTACTCTCACCGTACCCCAAAGGTGTATTGGATTTGCACGAAGACGGGTTGGGCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000479380.2
ENST00000495790.1
ENST00000667706.1
CDS CCA 72 bp CTGCTACTTTTACTTTGCGTAGAGGTACTGCATGTCTaGGTCCCAGGTTGTGCTGTTCCTGTTCGGTTTATA +
Preference number: 6 (lower is better)
Translates to: LLLLLCVEVLHV*VPGCAVPVRFI
Trigger: TATAAACCGAACAGGAACAGCACAACCTGGGACCCAGACATGCAGTACCTCTACGCAAAGTAAAAGTAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000479380.2
ENST00000495790.1
ENST00000667706.1
CDS TCA 72 bp GAGAGAGGTTCTTCGTCTGAGCTGGGAAAGTCATACTaGTTCAGATCTTTAGCATTGAAGACTGGCAGTGCA +
Preference number: 6 (lower is better)
Translates to: ERGSSSELGKSY*FRSLALKTGSA
Trigger: TGCACTGCCAGTCTTCAATGCTAAAGATCTGAATCAGTATGACTTTCCCAGCTCAGACGAAGAACCTCTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000479380.2
ENST00000495790.1
ENST00000667706.1
CDS CCA 72 bp AATAGGGATGATGGGGATGGCATAAGTAGGTTTCATTaGCTGTCTCTGTGCCATAACCTCAGACATGATCTC +
Preference number: 6 (lower is better)
Translates to: NRDDGDGISRFH*LSLCHNLRHDL
Trigger: GAGATCATGTCTGAGGTTATGGCACAGAGACAGCCAATGAAACCTACTTATGCCATCCCCATCATCCCTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000479380.2
ENST00000495790.1
ENST00000667706.1
CDS CCA 72 bp AAACCCTGTATATTCAGGCGAAAGCCACTTTTCTGCTaGTTAGATGCAAGGTTCTGTGATGTGTTGGTGGAG +
Preference number: 6 (lower is better)
Translates to: KPCIFRRKPLFC*LDARFCDVLVE
Trigger: CTCCACCAACACATCACAGAACCTTGCATCTAACCAGCAGAAAAGTGGCTTTCGCCTGAATATACAGGGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263062.8
CDS CAA 72 bp TGCAAGCTGCTGTTTCTGCATGAGTGCCAGTTGCTGTaGATGTTGCTGGTATTGTTCGGCTGTAAATGCAAA +
Preference number: 6 (lower is better)
Translates to: CKLLFLHECQLL*MLLVLFGCKCK
Trigger: TTTGCATTTACAGCCGAACAATACCAGCAACATCAACAGCAACTGGCACTCATGCAGAAACAGCAGCTTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000479380.2
CDS GCA 72 bp TCACTGTCATGTAGGGATGGTGTCCGAGGCCTAAAATaGCGCCATCTACATGATTTGATATTGACTAGTATC +
Preference number: 6 (lower is better)
Translates to: SLSCRDGVRGLK*RHLHDLILTSI
Trigger: GATACTAGTCAATATCAAATCATGTAGATGGCGGCATTTTAGGCCTCGGACACCATCCCTACATGACAGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000479380.2
ENST00000495790.1
ENST00000667706.1
CDS CAA 90 bp GTTCGGTTTATACTCCTATATAATTTTCTACAGGAGAGTTCATCATaGTCACTGTCATGTAGGGATGGTGTCCGAGGCCTAAAATGCCGC +
Preference number: 6 (lower is better)
Translates to: VRFILLYNFLQESSS*SLSCRDGVRGLKCR
Trigger: GCGGCATTTTAGGCCTCGGACACCATCCCTACATGACAGTGACAATGATGAACTCTCCTGTAGAAAATTATATAGGAGTATAAACCGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000479380.2
ENST00000495790.1
ENST00000667706.1
CDS CAA 72 bp GAACTCCTTCACATCCATTGCTTCCTGGTGTTTAAATaGACTGCTATTAGTAATAGGGATGATGGGGATGGC +
Preference number: 6 (lower is better)
Translates to: ELLHIHCFLVFK*TAISNRDDGDG
Trigger: GCCATCCCCATCATCCCTATTACTAATAGCAGTCAATTTAAACACCAGGAAGCAATGGATGTGAAGGAGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000479380.2
ENST00000495790.1
ENST00000667706.1
CDS TCA 72 bp TTGTCCGAGGTATTTGTTTCTGAGGTATTGGCAAACTaGTTGACTGGAGAATGTTGTGGTGAGGAAAGCATT +
Preference number: 6 (lower is better)
Translates to: LSEVFVSEVLAN*LTGECCGEESI
Trigger: AATGCTTTCCTCACCACAACATTCTCCAGTCAATCAGTTTGCCAATACCTCAGAAACAAATACCTCGGACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000479380.2
ENST00000495790.1
ENST00000667706.1
CDS TCA 72 bp AAAGCCACTTTTCTGCTGGTTAGATGCAAGGTTCTATaGCAACAGTTGGTAATTAGAGATGAACTCTGGTGG +
Preference number: 6 (lower is better)
Translates to: KATFLLVRCKVL*QQLVIRDELWW
Trigger: CCACCAGAGTTCATCTCTAATTACCAACTGTTGTCATAGAACCTTGCATCTAACCAGCAGAAAAGTGGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479380.2
CDS CCA 72 bp TATAGACTCATAGTAAGCAATATTACTTTCTGCCTCTaGGACCGGTATAACCATATTATCCCTCTTCTCGCC +
Preference number: 6 (lower is better)
Translates to: YRLIVSNITFCL*DRYNHIIPLLA
Trigger: GGCGAGAAGAGGGATAATATGGTTATACCGGTCCCAGAGGCAGAAAGTAATATTGCTTACTATGAGTCTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000479380.2
ENST00000495790.1
ENST00000667706.1
CDS CAA 72 bp ATACTCCTATATAATTTTCTACAGGAGAGTTCATCATaGTCACTGTCATGTAGGGATGGTGTCCGAGGCCTA +
Preference number: 6 (lower is better)
Translates to: ILLYNFLQESSS*SLSCRDGVRGL
Trigger: TAGGCCTCGGACACCATCCCTACATGACAGTGACAATGATGAACTCTCCTGTAGAAAATTATATAGGAGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000479380.2
ENST00000495790.1
ENST00000667706.1
CDS CAA 90 bp GCACATTATACATTAACGTCTCTCCATTCCTTGAGTTTATGTGTTTaGCTATTTGTTTCCTGTCCCCATACAAGCAACTCGCATAAAGGC +
Preference number: 6 (lower is better)
Translates to: AHYTLTSLHSLSLCV*LFVSCPHTSNSHKG
Trigger: GCCTTTATGCGAGTTGCTTGTATGGGGACAGGAAACAAATAGCAAAACACATAAACTCAAGGAATGGAGAGACGTTAATGTATAATGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495790.1
CDS TCA 72 bp TGCCGCCATCTACATGATTTGATATTGACTAGTATCTaGCTGAGGTCTTTAGAGAAAGATTTGTCCGAGGTA +
Preference number: 6 (lower is better)
Translates to: CRHLHDLILTSI*LRSLEKDLSEV
Trigger: TACCTCGGACAAATCTTTCTCTAAAGACCTCAGTCAGATACTAGTCAATATCAAATCATGTAGATGGCGGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263062.8
ENST00000319778.11
ENST00000375110.6
ENST00000479380.2
ENST00000495790.1
ENST00000667706.1
CDS CAA 72 bp CTGTGTGCAATCAGGATTTACACTTGTCTTCATCTGTaGCCCTTTCTCACAATTCTACCCCTTGATAATTTA +
Preference number: 6 (lower is better)
Translates to: LCAIRIYTCLHL*PFLTILPLDNL
Trigger: TAAATTATCAAGGGGTAGAATTGTGAGAAAGGGCAACAGATGAAGACAAGTGTAAATCCTGATTGCACACAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495790.1
CDS CAA 90 bp CTTAATACACTGTGTGCAATCAGGATTTACACTTGTCTTCATCTGTaGCCCTTTCTCACAATTCTACCCCTTGATAATTTATCTGAGGTT +
Preference number: 6 (lower is better)
Translates to: LNTLCAIRIYTCLHL*PFLTILPLDNLSEV
Trigger: AACCTCAGATAAATTATCAAGGGGTAGAATTGTGAGAAAGGGCAACAGATGAAGACAAGTGTAAATCCTGATTGCACACAGTGTATTAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495790.1
CDS GCA 72 bp ACCCTGTTTAAATGGCTGTACCTGAAAACCAAGGTATaGAATTCCTTAGGATTAGAAGTCATCAAGTTATAC +
Preference number: 6 (lower is better)
Translates to: TLFKWLYLKTKV*NSLGLEVIKLY
Trigger: GTATAACTTGATGACTTCTAATCCTAAGGAATTGCATACCTTGGTTTTCAGGTACAGCCATTTAAACAGGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469059.2
CDS GCA 72 bp TGTGTGCAATCAGGATTTACACTTGTCTTCATCTGTTaGCCTTTCTCACAATTCTACCCCTTGATAATTTAT +
Preference number: 6 (lower is better)
Translates to: CVQSGFTLVFIC*PFSQFYPLIIY
Trigger: ATAAATTATCAAGGGGTAGAATTGTGAGAAAGGGCAACAGATGAAGACAAGTGTAAATCCTGATTGCACACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495790.1