RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EPB42 (Homo sapiens)

Ensembl gene IDs: ENSG00000166947

Ensembl transcript IDs: ENST00000441366.7, ENST00000540029.5, ENST00000565459.1, ENST00000567019.2, ENST00000569204.1, ENST00000648595.1

Found 344 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 72 bp GCAGTACAATTTATTTGGGGGCAGCTTATTCCAGCCTaGGGGGAGGTGCTCTCCTGCCACTGTACTCTGTTA +
Preference number: 3 (lower is better)
Translates to: AVQFIWGQLIPA*GEVLSCHCTLL
Trigger: TAACAGAGTACAGTGGCAGGAGAGCACCTCCCCCCAGGCTGGAATAAGCTGCCCCCAAATAAATTGTACTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000565459.1
3UTR GCA 72 bp CTGTACTCTGTTAAACTCAGCAAACACTTCTCACACTaGTACGAAGGGTCTGTTTACTTATCTGACTGCAGT +
Preference number: 3 (lower is better)
Translates to: LYSVKLSKHFSH*YEGSVYLSDCS
Trigger: ACTGCAGTCAGATAAGTAAACAGACCCTTCGTAGCAGTGTGAGAAGTGTTTGCTGAGTTTAACAGAGTACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565459.1
CDS-3UTR TCA 90 bp ATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGGTCGGCCTCGGCCGGTaGGCCACTGCCGCAGGATGG +
Preference number: 4 (lower is better)
Translates to: MFGLDCRTRVGRRVVIELVGLGR*ATAAGW
Trigger: CCATCCTGCGGCAGTGGCTCACCGGCCGAGGCCGAC...CAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR TCA 90 bp CACATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGGTCGGCCTCGGCCGGTaGGCCACTGCCGCAGGATGG +
Preference number: 4 (lower is better)
Translates to: HMFGLDCRTRVGRRVVIEVGLGR*ATAAGW
Trigger: CCATCCTGCGGCAGTGGCTCACCGGCCGAGGCCGAC...CTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACATGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR CCA 90 bp CACATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGGCCACTGCCGCAGGATaGGCACGCTGCCCCGGCGCT +
Preference number: 4 (lower is better)
Translates to: HMFGLDCRTRVGRRVVIEATAAG*ARCPGA
Trigger: AGCGCCGGGGCAGCGTGCCCATCCTGCGGCAGTGGC...CTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACATGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR CCA 90 bp ATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGGCCACTGCCGCAGGATaGGCACGCTGCCCCGGCGCT +
Preference number: 4 (lower is better)
Translates to: MFGLDCRTRVGRRVVIELATAAG*ARCPGA
Trigger: AGCGCCGGGGCAGCGTGCCCATCCTGCGGCAGTGGC...CAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR GCA 90 bp ATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGTGGGTGGCCTGGGTCTaGGGGGTGGGCAGGACCCTC +
Preference number: 4 (lower is better)
Translates to: MFGLDCRTRVGRRVVIELWVAWV*GVGRTL
Trigger: GAGGGTCCTGCCCACCCCGCAGACCCAGGCCACCCA...CAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR GCA 90 bp CACATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGTGGGTGGCCTGGGTCTaGGGGGTGGGCAGGACCCTC +
Preference number: 4 (lower is better)
Translates to: HMFGLDCRTRVGRRVVIEWVAWV*GVGRTL
Trigger: GAGGGTCCTGCCCACCCCGCAGACCCAGGCCACCCA...CTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACATGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR GCA 90 bp ATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGCGGCCGGTGAGCCACTaGCGCAGGATGGGCACGCTG +
Preference number: 4 (lower is better)
Translates to: MFGLDCRTRVGRRVVIELRPVSH*RRMGTL
Trigger: CAGCGTGCCCATCCTGCGGCAGTGGCTCACCGGCCG...CAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR GCA 90 bp TTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGGAACGGCCGGTGAGCCACTaGCGCAGGATGGGCACGCTG +
Preference number: 4 (lower is better)
Translates to: FGLDCRTRVGRRVVIELERPVSH*RRMGTL
Trigger: CAGCGTGCCCATCCTGCGGCAGTGGCTCACCGGCCG...TTCCAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR GCA 90 bp GCAAACACTTCTCACACTGCTACGAAGGGTCTGTTTACTTATCTGACTGCAGTTGGGGTGCCCTGTGGCTaGTGCCTGCCCAAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: ANTSHTATKGLFTYLTAVGVPCG*CLPKAG
Trigger: CCCTGCCTTGGGCAGGCAGCAGCCACAGGGCACCCC...AACTGCAGTCAGATAAGTAAACAGACCCTTCGTAGCAGTGTGAGAAGTGTTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565459.1
CDS-3UTR CCA 90 bp ATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGCCTTCCTGGGTGGCCTaGGTCTGCGGGGTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: MFGLDCRTRVGRRVVIELPSWVA*VCGVGR
Trigger: CCTGCCCACCCCGCAGACCCAGGCCACCCAGGAAGG...CAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR CCA 90 bp CACATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCCTTCCTGGGTGGCCTaGGTCTGCGGGGTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: HMFGLDCRTRVGRRVVIEPSWVA*VCGVGR
Trigger: CCTGCCCACCCCGCAGACCCAGGCCACCCAGGAAGG...CTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACATGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR TCA 90 bp TTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGGAAAGAGGCGCCGGGAGCTaGGGGCCTTGGTGTGGTGCT +
Preference number: 4 (lower is better)
Translates to: FGLDCRTRVGRRVVIELERGAGS*GPWCGA
Trigger: AGCACCACACCAAGGCCCTCAGCTCCCGGCGCCTCT...TTCCAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR TCA 90 bp ATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGAGAGGCGCCGGGAGCTaGGGGCCTTGGTGTGGTGCT +
Preference number: 4 (lower is better)
Translates to: MFGLDCRTRVGRRVVIELRGAGS*GPWCGA
Trigger: AGCACCACACCAAGGCCCTCAGCTCCCGGCGCCTCT...CAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR TCA 90 bp CACATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGAGAGGCGCCGGGAGCTaGGGGCCTTGGTGTGGTGCT +
Preference number: 4 (lower is better)
Translates to: HMFGLDCRTRVGRRVVIERGAGS*GPWCGA
Trigger: AGCACCACACCAAGGCCCTCAGCTCCCGGCGCCTCT...CTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACATGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR GCA 90 bp CTCAGCAAACACTTCTCACACTGCTACGAAGGGTCTGTTTACTTATCTGACTGCCCTGTGGCTGCTGCCTaGCCAAGGCAGGGGCCATGT +
Preference number: 4 (lower is better)
Translates to: LSKHFSHCYEGSVYLSDCPVAAA*PRQGPC
Trigger: ACATGGCCCCTGCCTTGGGCAGGCAGCAGCCACAGG...GCAGTCAGATAAGTAAACAGACCCTTCGTAGCAGTGTGAGAAGTGTTTGCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565459.1
CDS-3UTR CCA 90 bp TTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGGAACCTGGGTCTGCGGGGTaGGCAGGACCCTCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: FGLDCRTRVGRRVVIELEPGSAG*AGPSAP
Trigger: AGGAGCAGAGGGTCCTGCCCACCCCGCAGACCCAGG...TTCCAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR CCA 90 bp CACATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCCTGGGTCTGCGGGGTaGGCAGGACCCTCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: HMFGLDCRTRVGRRVVIEPGSAG*AGPSAP
Trigger: AGGAGCAGAGGGTCCTGCCCACCCCGCAGACCCAGG...CTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACATGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR CCA 90 bp TTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGGAAAGCAAGGCCCCTTCCTaGGTGGCCTGGGTCTGCGGG +
Preference number: 4 (lower is better)
Translates to: FGLDCRTRVGRRVVIELESKAPS*VAWVCG
Trigger: CCCGCAGACCCAGGCCACCCAGGAAGGGGCCTTGCT...TTCCAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR CCA 90 bp CACATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGAGCAAGGCCCCTTCCTaGGTGGCCTGGGTCTGCGGG +
Preference number: 4 (lower is better)
Translates to: HMFGLDCRTRVGRRVVIESKAPS*VAWVCG
Trigger: CCCGCAGACCCAGGCCACCCAGGAAGGGGCCTTGCT...CTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACATGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR GCA 90 bp TTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGGAAGCAGGATGGGCACGCTaGCCCGGCGCTTGTTCAGCA +
Preference number: 4 (lower is better)
Translates to: FGLDCRTRVGRRVVIELEAGWAR*PGACSA
Trigger: TGCTGAACAAGCGCCGGGGCAGCGTGCCCATCCTGC...TTCCAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR GCA 90 bp CACATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGGCAGGATGGGCACGCTaGCCCGGCGCTTGTTCAGCA +
Preference number: 4 (lower is better)
Translates to: HMFGLDCRTRVGRRVVIEAGWAR*PGACSA
Trigger: TGCTGAACAAGCGCCGGGGCAGCGTGCCCATCCTGC...CTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACATGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR CCA 90 bp ATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGAGCCCTGTCGAGCGCTaGCTTGGCTCACCCTGTCCC +
Preference number: 4 (lower is better)
Translates to: MFGLDCRTRVGRRVVIELSPVER*LGSPCP
Trigger: GGGACAGGGTGAGCCAAGCCAGCGCTCGACAGGGCT...CAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648595.1
CDS-3UTR TCA 90 bp CACATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGGCGAGTAGTGGCCAATaGCAGCGTCCGCAGGTGTGG +
Preference number: 4 (lower is better)
Translates to: HMFGLDCRTRVGRRVVIEASSGQ*QRPQVW
Trigger: CCACACCTGCGGACGCTGTCATTGGCCACTACTCGC...CTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACATGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441366.7
ENST00000648595.1
CDS-3UTR TCA 90 bp TTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGGAAACCGGTGCCCTGTGCTaGGGCAAACGTGGTCACCAC +
Preference number: 4 (lower is better)
Translates to: FGLDCRTRVGRRVVIELETGALC*GKRGHH
Trigger: GTGGTGACCACGTTTGCCTCAGCACAGGGCACCGGT...TTCCAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR TCA 90 bp CACATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGACCGGTGCCCTGTGCTaGGGCAAACGTGGTCACCAC +
Preference number: 4 (lower is better)
Translates to: HMFGLDCRTRVGRRVVIETGALC*GKRGHH
Trigger: GTGGTGACCACGTTTGCCTCAGCACAGGGCACCGGT...CTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACATGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR GCA 90 bp TTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGGAAAACACACGGGCCACGTaGACCGGCTGGCTCCACTTC +
Preference number: 4 (lower is better)
Translates to: FGLDCRTRVGRRVVIELENTRAT*TGWLHF
Trigger: GAAGTGGAGCCAGCCGGTGCACGTGGCCCGTGTGTT...TTCCAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR GCA 90 bp ATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGAACACACGGGCCACGTaGACCGGCTGGCTCCACTTC +
Preference number: 4 (lower is better)
Translates to: MFGLDCRTRVGRRVVIELNTRAT*TGWLHF
Trigger: GAAGTGGAGCCAGCCGGTGCACGTGGCCCGTGTGTT...CAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR GCA 90 bp TTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGGAAGAAGACGCCCACCGGTaGCCTGTGCTGAGGCAAACG +
Preference number: 4 (lower is better)
Translates to: FGLDCRTRVGRRVVIELEEDAHR*PVLRQT
Trigger: CGTTTGCCTCAGCACAGGGCACCGGTGGGCGTCTTC...TTCCAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR GCA 90 bp ATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGGAAGACGCCCACCGGTaGCCTGTGCTGAGGCAAACG +
Preference number: 4 (lower is better)
Translates to: MFGLDCRTRVGRRVVIELEDAHR*PVLRQT
Trigger: CGTTTGCCTCAGCACAGGGCACCGGTGGGCGTCTTC...CAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR GCA 90 bp CACATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGGAAGACGCCCACCGGTaGCCTGTGCTGAGGCAAACG +
Preference number: 4 (lower is better)
Translates to: HMFGLDCRTRVGRRVVIEEDAHR*PVLRQT
Trigger: CGTTTGCCTCAGCACAGGGCACCGGTGGGCGTCTTC...CTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACATGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR GCA 90 bp AACTCAGCAAACACTTCTCACACTGCTACGAAGGGTCTGTTTACTTATCTGACTAGAGACTGCAGGGGGTaGCCTGTGGCTGCTGCCTGC +
Preference number: 4 (lower is better)
Translates to: NSANTSHTATKGLFTYLTRDCRG*PVAAAC
Trigger: GCAGGCAGCAGCCACAGGGCACCCCCTGCAGTCTCT...AGTCAGATAAGTAAACAGACCCTTCGTAGCAGTGTGAGAAGTGTTTGCTGAGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565459.1
CDS-3UTR CCA 90 bp ATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGCCAGGGCCTGTCCCATaGTTGCAGGCCGCTCCTCTT +
Preference number: 4 (lower is better)
Translates to: MFGLDCRTRVGRRVVIELPGPVP*LQAAPL
Trigger: AAGAGGAGCGGCCTGCAACCATGGGACAGGCCCTGG...CAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441366.7
ENST00000540029.5
CDS-3UTR CCA 90 bp TTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGGAACCAGGGCCTGTCCCATaGTTGCAGGCCGCTCCTCTT +
Preference number: 4 (lower is better)
Translates to: FGLDCRTRVGRRVVIELEPGPVP*LQAAPL
Trigger: AAGAGGAGCGGCCTGCAACCATGGGACAGGCCCTGG...TTCCAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441366.7
ENST00000540029.5
CDS-3UTR CCA 90 bp TTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGGAAGCCACGTGCACCGGCTaGCTCCACTTCTCTACCTGC +
Preference number: 4 (lower is better)
Translates to: FGLDCRTRVGRRVVIELEATCTG*LHFSTC
Trigger: GCAGGTAGAGAAGTGGAGCCAGCCGGTGCACGTGGC...TTCCAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR CCA 90 bp ATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGGCCACGTGCACCGGCTaGCTCCACTTCTCTACCTGC +
Preference number: 4 (lower is better)
Translates to: MFGLDCRTRVGRRVVIELATCTG*LHFSTC
Trigger: GCAGGTAGAGAAGTGGAGCCAGCCGGTGCACGTGGC...CAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR CCA 90 bp TTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGGAAGTGCTGAGGCAAACGTaGTCACCACGCGGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: FGLDCRTRVGRRVVIELEVLRQT*SPRGQG
Trigger: TCCCTGCCCGCGTGGTGACCACGTTTGCCTCAGCAC...TTCCAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR CCA 90 bp ATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGGTGCTGAGGCAAACGTaGTCACCACGCGGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: MFGLDCRTRVGRRVVIELVLRQT*SPRGQG
Trigger: TCCCTGCCCGCGTGGTGACCACGTTTGCCTCAGCAC...CAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR CCA 90 bp CACATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGGTGCTGAGGCAAACGTaGTCACCACGCGGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: HMFGLDCRTRVGRRVVIEVLRQT*SPRGQG
Trigger: TCCCTGCCCGCGTGGTGACCACGTTTGCCTCAGCAC...CTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACATGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR CCA 90 bp CTCTCCTGCCACTGTACTCTGTTAAACTCAGCAAACACTTCTCACACTGCTACGGCAGGTACAGAGGACTaGCAGTCTCGAGACTGGGAG +
Preference number: 4 (lower is better)
Translates to: LSCHCTLLNSANTSHTATAGTED*QSRDWE
Trigger: CTCCCAGTCTCGAGACTGCCAGTCCTCTGTACCTGC...CGTAGCAGTGTGAGAAGTGTTTGCTGAGTTTAACAGAGTACAGTGGCAGGAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565459.1
CDS-3UTR CCA 90 bp CACACTGCTACGAAGGGTCTGTTTACTTATCTGACTGCAGTTGGCATCGTGTTTCAGCTTATTCCAGCCTaGGGGGAGGTGCTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: HTATKGLFTYLTAVGIVFQLIPA*GEVLSC
Trigger: GCAGGAGAGCACCTCCCCCCAGGCTGGAATAAGCTG...AAACACGATGCCAACTGCAGTCAGATAAGTAAACAGACCCTTCGTAGCAGTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565459.1
CDS-3UTR GCA 90 bp ATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGGGCCTGTCCCATGGTTaGAGGCCGCTCCTCTTATCC +
Preference number: 4 (lower is better)
Translates to: MFGLDCRTRVGRRVVIELGLSHG*RPLLLS
Trigger: GGATAAGAGGAGCGGCCTGCAACCATGGGACAGGCC...CAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441366.7
ENST00000540029.5
CDS-3UTR GCA 90 bp TTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGGAAGGCCTGTCCCATGGTTaGAGGCCGCTCCTCTTATCC +
Preference number: 4 (lower is better)
Translates to: FGLDCRTRVGRRVVIELEGLSHG*RPLLLS
Trigger: GGATAAGAGGAGCGGCCTGCAACCATGGGACAGGCC...TTCCAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441366.7
ENST00000540029.5
CDS-3UTR GCA 90 bp ATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGCAGGGCAGGCAGAAATaGACGGACTGGAGCGCGGAA +
Preference number: 4 (lower is better)
Translates to: MFGLDCRTRVGRRVVIELQGRQK*TDWSAE
Trigger: TTCCGCGCTCCAGTCCGTGCATTTCTGCCTGCCCTG...CAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR GCA 90 bp TTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGGAACAGGGCAGGCAGAAATaGACGGACTGGAGCGCGGAA +
Preference number: 4 (lower is better)
Translates to: FGLDCRTRVGRRVVIELEQGRQK*TDWSAE
Trigger: TTCCGCGCTCCAGTCCGTGCATTTCTGCCTGCCCTG...TTCCAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR GCA 90 bp ATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGCGTCCCCTCCTTGACTaGTCTGACCGGCACCAGATC +
Preference number: 4 (lower is better)
Translates to: MFGLDCRTRVGRRVVIELRPLLD*SDRHQI
Trigger: GATCTGGTGCCGGTCAGAGCAGTCAAGGAGGGGACG...CAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR GCA 90 bp CACATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCGTCCCCTCCTTGACTaGTCTGACCGGCACCAGATC +
Preference number: 4 (lower is better)
Translates to: HMFGLDCRTRVGRRVVIERPLLD*SDRHQI
Trigger: GATCTGGTGCCGGTCAGAGCAGTCAAGGAGGGGACG...CTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR GCA 90 bp TCACACTGCTACGAAGGGTCTGTTTACTTATCTGACTGCAGTTGGCATCGTGTTGCACTGAGCGTGAGGTaGAGCTTCTTCCTCCAGAGC +
Preference number: 4 (lower is better)
Translates to: SHCYEGSVYLSDCSWHRVALSVR*SFFLQS
Trigger: GCTCTGGAGGAAGAAGCTGCACCTCACGCTCAGTGC...AACACGATGCCAACTGCAGTCAGATAAGTAAACAGACCCTTCGTAGCAGTGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565459.1
CDS-3UTR CCA 90 bp CACATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCAGCGTCCGCAGGTGTaGTCACAGAGATGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: HMFGLDCRTRVGRRVVIEQRPQV*SQRWSR
Trigger: CCTGGACCATCTCTGTGACCACACCTGCGGACGCTG...CTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACATGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441366.7
ENST00000648595.1
CDS-3UTR CCA 90 bp ATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGCAGCGTCCGCAGGTGTaGTCACAGAGATGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: MFGLDCRTRVGRRVVIELQRPQV*SQRWSR
Trigger: CCTGGACCATCTCTGTGACCACACCTGCGGACGCTG...CAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441366.7
ENST00000648595.1
CDS-3UTR CCA 90 bp ATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGGCCAACACCCAGGCCTaGCCATCATACACAGGTCGG +
Preference number: 4 (lower is better)
Translates to: MFGLDCRTRVGRRVVIELANTQA*PSYTGR
Trigger: CCGACCTGTGTATGATGGCCAGGCCTGGGTGTTGGC...CAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR CCA 90 bp TCACACTGCTACGAAGGGTCTGTTTACTTATCTGACTGCAGTTGGCATCGTGTTAGCGTCACTGAGATCTaGGCATCCCCTCTCAGGGGT +
Preference number: 4 (lower is better)
Translates to: SHCYEGSVYLSDCSWHRVSVTEI*ASPLRG
Trigger: ACCCCTGAGAGGGGATGCCCAGATCTCAGTGACGCT...AACACGATGCCAACTGCAGTCAGATAAGTAAACAGACCCTTCGTAGCAGTGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565459.1
CDS-3UTR CCA 90 bp TTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGGAAGCTCACCCTGTCCCATaGTTGCAGGCCGCTCCTCTT +
Preference number: 4 (lower is better)
Translates to: FGLDCRTRVGRRVVIELEAHPVP*LQAAPL
Trigger: AAGAGGAGCGGCCTGCAACCATGGGACAGGGTGAGC...TTCCAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648595.1
CDS-3UTR CCA 90 bp CACATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGTGTCGAGCGCTGGCTTaGCTCACCCTGTCCCATGGT +
Preference number: 4 (lower is better)
Translates to: HMFGLDCRTRVGRRVVIECRALA*LTLSHG
Trigger: ACCATGGGACAGGGTGAGCCAAGCCAGCGCTCGACA...CTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACATGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648595.1
CDS-3UTR TCA 90 bp TTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGGAACTCCAGTTTGTGCAGTaGGGGCCACCTTCTTCAGGG +
Preference number: 4 (lower is better)
Translates to: FGLDCRTRVGRRVVIELELQFVQ*GPPSSG
Trigger: CCCTGAAGAAGGTGGCCCTCACTGCACAAACTGGAG...TTCCAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441366.7
ENST00000648595.1
CDS-3UTR TCA 90 bp ATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGGAGTTGCTTCCTGCCTaGGACCTGCAGCAGAAGCGA +
Preference number: 4 (lower is better)
Translates to: MFGLDCRTRVGRRVVIELELLPA*DLQQKR
Trigger: TCGCTTCTGCTGCAGGTCTCAGGCAGGAAGCAACTC...CAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441366.7
ENST00000648595.1
CDS-3UTR TCA 90 bp TTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGGAATCCTCTCTCTGTGAATaGGCCCCCTTCCCAGGATGG +
Preference number: 4 (lower is better)
Translates to: FGLDCRTRVGRRVVIELESSLCE*APFPGW
Trigger: CCATCCTGGGAAGGGGGCTCATTCACAGAGAGAGGA...TTCCAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR TCA 90 bp ATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGTCCTCTCTCTGTGAATaGGCCCCCTTCCCAGGATGG +
Preference number: 4 (lower is better)
Translates to: MFGLDCRTRVGRRVVIELSSLCE*APFPGW
Trigger: CCATCCTGGGAAGGGGGCTCATTCACAGAGAGAGGA...CAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR TCA 90 bp TTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGGAACCTCAGTTTGTGCAGTaGGGGCCACCTTCTTCAGGG +
Preference number: 4 (lower is better)
Translates to: FGLDCRTRVGRRVVIELEPQFVQ*GPPSSG
Trigger: CCCTGAAGAAGGTGGCCCTCACTGCACAAACTGAGG...TTCCAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540029.5
CDS-3UTR GCA 90 bp TTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGGAAGCACTGAGCGTGAGGTaGAGCTTCTTCCTCCAGAGC +
Preference number: 4 (lower is better)
Translates to: FGLDCRTRVGRRVVIELEALSVR*SFFLQS
Trigger: GCTCTGGAGGAAGAAGCTGCACCTCACGCTCAGTGC...TTCCAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR GCA 90 bp CACATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGGCACTGAGCGTGAGGTaGAGCTTCTTCCTCCAGAGC +
Preference number: 4 (lower is better)
Translates to: HMFGLDCRTRVGRRVVIEALSVR*SFFLQS
Trigger: GCTCTGGAGGAAGAAGCTGCACCTCACGCTCAGTGC...CTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR GCA 90 bp ATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGACCCTGTCCCATGGTTaGAGGCCGCTCCTCTTATCC +
Preference number: 4 (lower is better)
Translates to: MFGLDCRTRVGRRVVIELTLSHG*RPLLLS
Trigger: GGATAAGAGGAGCGGCCTGCAACCATGGGACAGGGT...CAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648595.1
CDS-3UTR CCA 90 bp ATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGGAGATGGTCCAGGACTaGGCATCTCTCTCCTCCACC +
Preference number: 4 (lower is better)
Translates to: MFGLDCRTRVGRRVVIELEMVQD*ASLSST
Trigger: GGTGGAGGAGAGAGATGCCCAGTCCTGGACCATCTC...CAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441366.7
ENST00000648595.1
CDS-3UTR CCA 90 bp CACATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGGAGATGGTCCAGGACTaGGCATCTCTCTCCTCCACC +
Preference number: 4 (lower is better)
Translates to: HMFGLDCRTRVGRRVVIEEMVQD*ASLSST
Trigger: GGTGGAGGAGAGAGATGCCCAGTCCTGGACCATCTC...CTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441366.7
ENST00000648595.1
CDS-3UTR CCA 90 bp CACATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGTCCCAGGACTCTGCCTaGATGCAGTCAGCTGTACCC +
Preference number: 4 (lower is better)
Translates to: HMFGLDCRTRVGRRVVIESQDSA*MQSAVP
Trigger: GGGTACAGCTGACTGCATCCAGGCAGAGTCCTGGGA...CTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR CCA 90 bp ATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGTCCCAGGACTCTGCCTaGATGCAGTCAGCTGTACCC +
Preference number: 4 (lower is better)
Translates to: MFGLDCRTRVGRRVVIELSQDSA*MQSAVP
Trigger: GGGTACAGCTGACTGCATCCAGGCAGAGTCCTGGGA...CAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR CCA 90 bp ATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGTGGCAGTCTCGAGACTaGGAGGACGGATGCCGTTGT +
Preference number: 4 (lower is better)
Translates to: MFGLDCRTRVGRRVVIELWQSRD*EDGCRC
Trigger: ACAACGGCATCCGTCCTCCCAGTCTCGAGACTGCCA...CAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR CCA 90 bp CACATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGTGGCAGTCTCGAGACTaGGAGGACGGATGCCGTTGT +
Preference number: 4 (lower is better)
Translates to: HMFGLDCRTRVGRRVVIEWQSRD*EDGCRC
Trigger: ACAACGGCATCCGTCCTCCCAGTCTCGAGACTGCCA...CTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR CCA 90 bp TCAGCAAACACTTCTCACACTGCTACGAAGGGTCTGTTTACTTATCTGACTGCATGGCAGTCTCGAGACTaGGAGGACGGATGCCGTTGT +
Preference number: 4 (lower is better)
Translates to: SANTSHTATKGLFTYLTAWQSRD*EDGCRC
Trigger: ACAACGGCATCCGTCCTCCCAGTCTCGAGACTGCCA...TGCAGTCAGATAAGTAAACAGACCCTTCGTAGCAGTGTGAGAAGTGTTTGCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565459.1
CDS-3UTR CCA 90 bp TTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGGAAGCAGGTACAGAGGACTaGCAGTCTCGAGACTGGGAG +
Preference number: 4 (lower is better)
Translates to: FGLDCRTRVGRRVVIELEAGTED*QSRDWE
Trigger: CTCCCAGTCTCGAGACTGCCAGTCCTCTGTACCTGC...TTCCAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR CCA 90 bp CACATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGGCAGGTACAGAGGACTaGCAGTCTCGAGACTGGGAG +
Preference number: 4 (lower is better)
Translates to: HMFGLDCRTRVGRRVVIEAGTED*QSRDWE
Trigger: CTCCCAGTCTCGAGACTGCCAGTCCTCTGTACCTGC...CTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR CCA 90 bp CCACTGTACTCTGTTAAACTCAGCAAACACTTCTCACACTGCTACGAAGGGTCTTCAGGGGTAGGGAGCTaGGTGCTTTCAAGAGCAGGT +
Preference number: 4 (lower is better)
Translates to: PLYSVKLSKHFSHCYEGSSGVGS*VLSRAG
Trigger: ACCTGCTCTTGAAAGCACCCAGCTCCCTACCCCTGA...AGACCCTTCGTAGCAGTGTGAGAAGTGTTTGCTGAGTTTAACAGAGTACAGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565459.1
CDS-3UTR CCA 90 bp ATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGAGCGTCACTGAGATCTaGGCATCCCCTCTCAGGGGT +
Preference number: 4 (lower is better)
Translates to: MFGLDCRTRVGRRVVIELSVTEI*ASPLRG
Trigger: ACCCCTGAGAGGGGATGCCCAGATCTCAGTGACGCT...CAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR CCA 90 bp TTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGGAAAGCGTCACTGAGATCTaGGCATCCCCTCTCAGGGGT +
Preference number: 4 (lower is better)
Translates to: FGLDCRTRVGRRVVIELESVTEI*ASPLRG
Trigger: ACCCCTGAGAGGGGATGCCCAGATCTCAGTGACGCT...TTCCAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR CCA 90 bp CACATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGAGCGTCACTGAGATCTaGGCATCCCCTCTCAGGGGT +
Preference number: 4 (lower is better)
Translates to: HMFGLDCRTRVGRRVVIESVTEI*ASPLRG
Trigger: ACCCCTGAGAGGGGATGCCCAGATCTCAGTGACGCT...CTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR TCA 90 bp TTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGGAATGGCTTGGGTCCTGTTaGTCTTGGAAGGCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: FGLDCRTRVGRRVVIELEWLGSC*SWKAAL
Trigger: GAGAGCAGCCTTCCAAGATCAACAGGACCCAAGCCA...TTCCAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441366.7
ENST00000648595.1
CDS-3UTR TCA 90 bp ATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGTGGCTTGGGTCCTGTTaGTCTTGGAAGGCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: MFGLDCRTRVGRRVVIELWLGSC*SWKAAL
Trigger: GAGAGCAGCCTTCCAAGATCAACAGGACCCAAGCCA...CAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441366.7
ENST00000648595.1
CDS-3UTR TCA 90 bp TTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGGAAGGACCCTCTGCTCCTTaGGAAAATGCAGCAAGGCAC +
Preference number: 4 (lower is better)
Translates to: FGLDCRTRVGRRVVIELEGPSAP*ENAARH
Trigger: GTGCCTTGCTGCATTTTCTCAAGGAGCAGAGGGTCC...TTCCAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR TCA 90 bp CTCTCCTGCCACTGTACTCTGTTAAACTCAGCAAACACTTCTCACACTGCTACGTTCTCCTGCTCACTGTaGTTAACCAGCGTCACTGAG +
Preference number: 4 (lower is better)
Translates to: LSCHCTLLNSANTSHTATFSCSL*LTSVTE
Trigger: CTCAGTGACGCTGGTTAATCACAGTGAGCAGGAGAA...CGTAGCAGTGTGAGAAGTGTTTGCTGAGTTTAACAGAGTACAGTGGCAGGAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565459.1
CDS-3UTR TCA 90 bp ATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGGTTCTGGAGGCTGACTaGGGCTGTGAGGGGTTGATA +
Preference number: 4 (lower is better)
Translates to: MFGLDCRTRVGRRVVIELVLEAD*GCEGLI
Trigger: TATCAACCCCTCACAGCCTCAGTCAGCCTCCAGAAC...CAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR TCA 90 bp TTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGGAAGTTCTGGAGGCTGACTaGGGCTGTGAGGGGTTGATA +
Preference number: 4 (lower is better)
Translates to: FGLDCRTRVGRRVVIELEVLEAD*GCEGLI
Trigger: TATCAACCCCTCACAGCCTCAGTCAGCCTCCAGAAC...TTCCAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR TCA 90 bp CACATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGAGTCCACTTCCACAGTaGGTCTCTGGAGCCCCACAT +
Preference number: 4 (lower is better)
Translates to: HMFGLDCRTRVGRRVVIESPLPQ*VSGAPH
Trigger: ATGTGGGGCTCCAGAGACTCACTGTGGAAGTGGACT...CTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR TCA 90 bp TTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGGAAAGTCCACTTCCACAGTaGGTCTCTGGAGCCCCACAT +
Preference number: 4 (lower is better)
Translates to: FGLDCRTRVGRRVVIELESPLPQ*VSGAPH
Trigger: ATGTGGGGCTCCAGAGACTCACTGTGGAAGTGGACT...TTCCAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR GCA 90 bp TTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGGAAATGATGGTGAAGGGCTaGCCCCTCCTCACAAAGAGG +
Preference number: 4 (lower is better)
Translates to: FGLDCRTRVGRRVVIELEMMVKG*PLLTKR
Trigger: CCTCTTTGTGAGGAGGGGGCAGCCCTTCACCATCAT...TTCCAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR GCA 90 bp CACATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGTCTCTCCTCCACCACTaGACTCCACCACTTTCGGTC +
Preference number: 4 (lower is better)
Translates to: HMFGLDCRTRVGRRVVIESLLHH*TPPLSV
Trigger: GACCGAAAGTGGTGGAGTGCAGTGGTGGAGGAGAGA...CTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACATGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441366.7
ENST00000648595.1
CDS-3UTR GCA 90 bp ATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGTCTCTCCTCCACCACTaGACTCCACCACTTTCGGTC +
Preference number: 4 (lower is better)
Translates to: MFGLDCRTRVGRRVVIELSLLHH*TPPLSV
Trigger: GACCGAAAGTGGTGGAGTGCAGTGGTGGAGGAGAGA...CAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441366.7
ENST00000648595.1
CDS-3UTR GCA 90 bp ATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGGTGGGCAGGACCCTCTaGTCCTTGAGAAAATGCAGC +
Preference number: 4 (lower is better)
Translates to: MFGLDCRTRVGRRVVIELVGRTL*SLRKCS
Trigger: GCTGCATTTTCTCAAGGAGCAGAGGGTCCTGCCCAC...CAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR GCA 90 bp CACATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGGTGGGCAGGACCCTCTaGTCCTTGAGAAAATGCAGC +
Preference number: 4 (lower is better)
Translates to: HMFGLDCRTRVGRRVVIEVGRTL*SLRKCS
Trigger: GCTGCATTTTCTCAAGGAGCAGAGGGTCCTGCCCAC...CTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR GCA 90 bp CACATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGGGCATCGCAGCACTGTaGAAGCAACAGCAGCCAACA +
Preference number: 4 (lower is better)
Translates to: HMFGLDCRTRVGRRVVIEGIAAL*KQQQPT
Trigger: TGTTGGCTGCTGTTGCTTGCACAGTGCTGCGATGCC...CTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACATGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR GCA 90 bp ATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGGGCATCGCAGCACTGTaGAAGCAACAGCAGCCAACA +
Preference number: 4 (lower is better)
Translates to: MFGLDCRTRVGRRVVIELGIAAL*KQQQPT
Trigger: TGTTGGCTGCTGTTGCTTGCACAGTGCTGCGATGCC...CAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR GCA 90 bp ATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGACCCCAATTGCCAGCTaGACTGCCTTCTCCTGCTCA +
Preference number: 4 (lower is better)
Translates to: MFGLDCRTRVGRRVVIELTPIAS*TAFSCS
Trigger: TGAGCAGGAGAAGGCAGTGCAGCTGGCAATTGGGGT...CAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR GCA 90 bp CCACTGTACTCTGTTAAACTCAGCAAACACTTCTCACACTGCTACGAAGGGTCTGGGGAGGTGCTCTCCTaGCACTGTACTCTGTTAAAC +
Preference number: 4 (lower is better)
Translates to: PLYSVKLSKHFSHCYEGSGEVLS*HCTLLN
Trigger: GTTTAACAGAGTACAGTGGCAGGAGAGCACCTCCCC...AGACCCTTCGTAGCAGTGTGAGAAGTGTTTGCTGAGTTTAACAGAGTACAGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565459.1
CDS-3UTR CCA 90 bp ATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGCTCCTCTTATCCACTTaGCCGCAGAAAGCGCCTCTC +
Preference number: 4 (lower is better)
Translates to: MFGLDCRTRVGRRVVIELLLLST*PQKAPL
Trigger: GAGAGGCGCTTTCTGCGGCCAAGTGGATAAGAGGAG...CAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR CCA 90 bp TTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGGAAGTGTGGTCACAGAGATaGTCCAGGACTGGGCATCTC +
Preference number: 4 (lower is better)
Translates to: FGLDCRTRVGRRVVIELEVWSQR*SRTGHL
Trigger: GAGATGCCCAGTCCTGGACCATCTCTGTGACCACAC...TTCCAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441366.7
ENST00000648595.1
CDS-3UTR CCA 90 bp CACATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGGTGTGGTCACAGAGATaGTCCAGGACTGGGCATCTC +
Preference number: 4 (lower is better)
Translates to: HMFGLDCRTRVGRRVVIEVWSQR*SRTGHL
Trigger: GAGATGCCCAGTCCTGGACCATCTCTGTGACCACAC...CTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACATGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441366.7
ENST00000648595.1
CDS-3UTR CCA 90 bp TTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGGAAACATCCCCCTCGAACTaGCCAAAGTCCCAGGACTCT +
Preference number: 4 (lower is better)
Translates to: FGLDCRTRVGRRVVIELETSPSN*PKSQDS
Trigger: AGAGTCCTGGGACTTTGGCCAGTTCGAGGGGGATGT...TTCCAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR CCA 90 bp ATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGACATCCCCCTCGAACTaGCCAAAGTCCCAGGACTCT +
Preference number: 4 (lower is better)
Translates to: MFGLDCRTRVGRRVVIELTSPSN*PKSQDS
Trigger: AGAGTCCTGGGACTTTGGCCAGTTCGAGGGGGATGT...CAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR CCA 90 bp ATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGTCAGGGGTAGGGAGCTaGGTGCTTTCAAGAGCAGGT +
Preference number: 4 (lower is better)
Translates to: MFGLDCRTRVGRRVVIELSGVGS*VLSRAG
Trigger: ACCTGCTCTTGAAAGCACCCAGCTCCCTACCCCTGA...CAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR CCA 90 bp TTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGGAATCAGGGGTAGGGAGCTaGGTGCTTTCAAGAGCAGGT +
Preference number: 4 (lower is better)
Translates to: FGLDCRTRVGRRVVIELESGVGS*VLSRAG
Trigger: ACCTGCTCTTGAAAGCACCCAGCTCCCTACCCCTGA...TTCCAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR CCA 90 bp TCACACTGCTACGAAGGGTCTGTTTACTTATCTGACTGCAGTTGGCATCGTGTTTCTTCCTCCAGAGCTTaGCAGCAAGGACACCGTTGT +
Preference number: 4 (lower is better)
Translates to: SHCYEGSVYLSDCSWHRVSSSRA*QQGHRC
Trigger: ACAACGGTGTCCTTGCTGCCAAGCTCTGGAGGAAGA...AACACGATGCCAACTGCAGTCAGATAAGTAAACAGACCCTTCGTAGCAGTGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565459.1
CDS-3UTR CCA 90 bp ATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGGCATCTAGGGAGTTCTaGAGGCTGACTGAGGCTGTG +
Preference number: 4 (lower is better)
Translates to: MFGLDCRTRVGRRVVIELASREF*RLTEAV
Trigger: CACAGCCTCAGTCAGCCTCCAGAACTCCCTAGATGC...CAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR CCA 90 bp CACATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGGCATCTAGGGAGTTCTaGAGGCTGACTGAGGCTGTG +
Preference number: 4 (lower is better)
Translates to: HMFGLDCRTRVGRRVVIEASREF*RLTEAV
Trigger: CACAGCCTCAGTCAGCCTCCAGAACTCCCTAGATGC...CTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACATGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR CCA 90 bp TTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGGAAGAGCCCCACATGTGTTaGCGTGAACTGGAACTTGGC +
Preference number: 4 (lower is better)
Translates to: FGLDCRTRVGRRVVIELEEPHMC*RELELG
Trigger: GCCAAGTTCCAGTTCACGCCAACACATGTGGGGCTC...TTCCAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR CCA 90 bp CACATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGGAGCCCCACATGTGTTaGCGTGAACTGGAACTTGGC +
Preference number: 4 (lower is better)
Translates to: HMFGLDCRTRVGRRVVIEEPHMC*RELELG
Trigger: GCCAAGTTCCAGTTCACGCCAACACATGTGGGGCTC...CTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR CCA 90 bp ATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGGAGCCCCACATGTGTTaGCGTGAACTGGAACTTGGC +
Preference number: 4 (lower is better)
Translates to: MFGLDCRTRVGRRVVIELEPHMC*RELELG
Trigger: GCCAAGTTCCAGTTCACGCCAACACATGTGGGGCTC...CAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR CCA 90 bp TTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGGAATCCACAGTGAGTCTCTaGAGCCCCACATGTGTTGGC +
Preference number: 4 (lower is better)
Translates to: FGLDCRTRVGRRVVIELESTVSL*SPTCVG
Trigger: GCCAACACATGTGGGGCTCCAGAGACTCACTGTGGA...TTCCAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR CCA 90 bp CACATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGTCCACAGTGAGTCTCTaGAGCCCCACATGTGTTGGC +
Preference number: 4 (lower is better)
Translates to: HMFGLDCRTRVGRRVVIESTVSL*SPTCVG
Trigger: GCCAACACATGTGGGGCTCCAGAGACTCACTGTGGA...CTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR TCA 90 bp ATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGACTTGTAGTTCTGAGTaGTGTCCTCGCAGCGGTCAC +
Preference number: 4 (lower is better)
Translates to: MFGLDCRTRVGRRVVIELTCSSE*CPRSGH
Trigger: GTGACCGCTGCGAGGACATCACTCAGAACTACAAGT...CAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR TCA 90 bp CACATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGACTTGTAGTTCTGAGTaGTGTCCTCGCAGCGGTCAC +
Preference number: 4 (lower is better)
Translates to: HMFGLDCRTRVGRRVVIETCSSE*CPRSGH
Trigger: GTGACCGCTGCGAGGACATCACTCAGAACTACAAGT...CTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACATGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR TCA 90 bp ATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGATTAACCAGCGTCACTaGGATCTGGGCATCCCCTCT +
Preference number: 4 (lower is better)
Translates to: MFGLDCRTRVGRRVVIELINQRH*DLGIPS
Trigger: AGAGGGGATGCCCAGATCTCAGTGACGCTGGTTAAT...CAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR TCA 90 bp TTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGGAAATTAACCAGCGTCACTaGGATCTGGGCATCCCCTCT +
Preference number: 4 (lower is better)
Translates to: FGLDCRTRVGRRVVIELEINQRH*DLGIPS
Trigger: AGAGGGGATGCCCAGATCTCAGTGACGCTGGTTAAT...TTCCAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR TCA 90 bp ATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGGAGGCTGTGAGGGGTTaGTACTGCTCTGCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: MFGLDCRTRVGRRVVIELEAVRG*YCSAFS
Trigger: AGAGAAAGCAGAGCAGTATCAACCCCTCACAGCCTC...CAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR TCA 90 bp CACATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGGAGGCTGTGAGGGGTTaGTACTGCTCTGCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: HMFGLDCRTRVGRRVVIEEAVRG*YCSAFS
Trigger: AGAGAAAGCAGAGCAGTATCAACCCCTCACAGCCTC...CTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR TCA 90 bp ATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGCCACATGTGTTGGCGTaGACTGGAACTTGGCACACA +
Preference number: 4 (lower is better)
Translates to: MFGLDCRTRVGRRVVIELPHVLA*TGTWHT
Trigger: TGTGTGCCAAGTTCCAGTTCACGCCAACACATGTGG...CAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR TCA 90 bp TTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGGAACCACATGTGTTGGCGTaGACTGGAACTTGGCACACA +
Preference number: 4 (lower is better)
Translates to: FGLDCRTRVGRRVVIELEPHVLA*TGTWHT
Trigger: TGTGTGCCAAGTTCCAGTTCACGCCAACACATGTGG...TTCCAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR GCA 90 bp ATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGCCTCTCTCAAACTGTTaGTTCTGGGCTCCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: MFGLDCRTRVGRRVVIELPLSNC*FWAPSG
Trigger: CCCAGAAGGAGCCCAGAAGCAACAGTTTGAGAGAGG...CAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR GCA 90 bp CACATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCCTCTCTCAAACTGTTaGTTCTGGGCTCCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: HMFGLDCRTRVGRRVVIEPLSNC*FWAPSG
Trigger: CCCAGAAGGAGCCCAGAAGCAACAGTTTGAGAGAGG...CTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACATGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR GCA 90 bp TTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGGAACCTCTCTCAAACTGTTaGTTCTGGGCTCCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: FGLDCRTRVGRRVVIELEPLSNC*FWAPSG
Trigger: CCCAGAAGGAGCCCAGAAGCAACAGTTTGAGAGAGG...TTCCAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR GCA 90 bp ATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGCTGCTCTCCAGTTTGTaGAGTGAGGGCCACCTTCTT +
Preference number: 4 (lower is better)
Translates to: MFGLDCRTRVGRRVVIELLLSSL*SEGHLL
Trigger: AAGAAGGTGGCCCTCACTGCACAAACTGGAGAGCAG...CAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441366.7
ENST00000648595.1
CDS-3UTR GCA 90 bp TTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGGAAAGAGGAGTTGCTTCCTaGCTGAGACCTGCAGCAGAA +
Preference number: 4 (lower is better)
Translates to: FGLDCRTRVGRRVVIELERGVAS*LRPAAE
Trigger: TTCTGCTGCAGGTCTCAGGCAGGAAGCAACTCCTCT...TTCCAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441366.7
ENST00000648595.1
CDS-3UTR GCA 90 bp CACATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGAGAGGAGTTGCTTCCTaGCTGAGACCTGCAGCAGAA +
Preference number: 4 (lower is better)
Translates to: HMFGLDCRTRVGRRVVIERGVAS*LRPAAE
Trigger: TTCTGCTGCAGGTCTCAGGCAGGAAGCAACTCCTCT...CTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACATGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441366.7
ENST00000648595.1
CDS-3UTR GCA 90 bp TTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGGAAGACTGGGAGGACGGATaGCGTTGTCTTTCTCACGTT +
Preference number: 4 (lower is better)
Translates to: FGLDCRTRVGRRVVIELEDWEDG*RCLSHV
Trigger: AACGTGAGAAAGACAACGGCATCCGTCCTCCCAGTC...TTCCAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR GCA 90 bp GCAAACACTTCTCACACTGCTACGAAGGGTCTGTTTACTTATCTGACTGCAGTTGACTGGGAGGACGGATaGCGTTGTCTTTCTCACGTT +
Preference number: 4 (lower is better)
Translates to: ANTSHTATKGLFTYLTAVDWEDG*RCLSHV
Trigger: AACGTGAGAAAGACAACGGCATCCGTCCTCCCAGTC...AACTGCAGTCAGATAAGTAAACAGACCCTTCGTAGCAGTGTGAGAAGTGTTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565459.1
CDS-3UTR GCA 90 bp AACTCAGCAAACACTTCTCACACTGCTACGAAGGGTCTGTTTACTTATCTGACTACCCCAATTGCCAGCTaGACTGCCTTCTCCTGCTCA +
Preference number: 4 (lower is better)
Translates to: NSANTSHTATKGLFTYLTTPIAS*TAFSCS
Trigger: TGAGCAGGAGAAGGCAGTGCAGCTGGCAATTGGGGT...AGTCAGATAAGTAAACAGACCCTTCGTAGCAGTGTGAGAAGTGTTTGCTGAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565459.1
CDS-3UTR CCA 90 bp ATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGCTTCTGGGCTCCTTCTaGGCTTTCTGTCTTCCAGAC +
Preference number: 4 (lower is better)
Translates to: MFGLDCRTRVGRRVVIELLLGSF*AFCLPD
Trigger: GTCTGGAAGACAGAAAGCCCAGAAGGAGCCCAGAAG...CAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR CCA 90 bp CACATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTTCTGGGCTCCTTCTaGGCTTTCTGTCTTCCAGAC +
Preference number: 4 (lower is better)
Translates to: HMFGLDCRTRVGRRVVIELLGSF*AFCLPD
Trigger: GTCTGGAAGACAGAAAGCCCAGAAGGAGCCCAGAAG...CTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACATGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR CCA 90 bp TTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGGAACTTCTGGGCTCCTTCTaGGCTTTCTGTCTTCCAGAC +
Preference number: 4 (lower is better)
Translates to: FGLDCRTRVGRRVVIELELLGSF*AFCLPD
Trigger: GTCTGGAAGACAGAAAGCCCAGAAGGAGCCCAGAAG...TTCCAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR CCA 90 bp TTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGGAACAGAAATGCACGGACTaGAGCGCGGAAGTACAGGAT +
Preference number: 4 (lower is better)
Translates to: FGLDCRTRVGRRVVIELEQKCTD*SAEVQD
Trigger: ATCCTGTACTTCCGCGCTCCAGTCCGTGCATTTCTG...TTCCAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR CCA 90 bp TTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGGAACCCCAGACTGGAAATTaGGAATGTGGCTTGGGTCCT +
Preference number: 4 (lower is better)
Translates to: FGLDCRTRVGRRVVIELEPQTGN*ECGLGP
Trigger: AGGACCCAAGCCACATTCCCAATTTCCAGTCTGGGG...TTCCAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441366.7
ENST00000648595.1
CDS-3UTR CCA 90 bp TTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGGAATCTTCCTCCAGAGCTTaGCAGCAAGGACACCGTTGT +
Preference number: 4 (lower is better)
Translates to: FGLDCRTRVGRRVVIELESSSRA*QQGHRC
Trigger: ACAACGGTGTCCTTGCTGCCAAGCTCTGGAGGAAGA...TTCCAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR CCA 90 bp ATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGTCTTCCTCCAGAGCTTaGCAGCAAGGACACCGTTGT +
Preference number: 4 (lower is better)
Translates to: MFGLDCRTRVGRRVVIELSSSRA*QQGHRC
Trigger: ACAACGGTGTCCTTGCTGCCAAGCTCTGGAGGAAGA...CAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR CCA 90 bp ATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGTCACACAGTCCTCCATaGGGGCATCTAGGGAGTTCT +
Preference number: 4 (lower is better)
Translates to: MFGLDCRTRVGRRVVIELSHSPP*GHLGSS
Trigger: AGAACTCCCTAGATGCCCCCATGGAGGACTGTGTGA...CAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR CCA 90 bp TTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGGAATCACACAGTCCTCCATaGGGGCATCTAGGGAGTTCT +
Preference number: 4 (lower is better)
Translates to: FGLDCRTRVGRRVVIELESHSPP*GHLGSS
Trigger: AGAACTCCCTAGATGCCCCCATGGAGGACTGTGTGA...TTCCAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR TCA 90 bp TTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGGAAAAGTACTCCATGCGCTaGGCCTCATTCTTCAGGAAC +
Preference number: 4 (lower is better)
Translates to: FGLDCRTRVGRRVVIELEKYSMR*ASFFRN
Trigger: GTTCCTGAAGAATGAGGCTCAGCGCATGGAGTACTT...TTCCAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR TCA 90 bp ATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGAAGTACTCCATGCGCTaGGCCTCATTCTTCAGGAAC +
Preference number: 4 (lower is better)
Translates to: MFGLDCRTRVGRRVVIELKYSMR*ASFFRN
Trigger: GTTCCTGAAGAATGAGGCTCAGCGCATGGAGTACTT...CAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR TCA 90 bp TTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGGAACCACACCCTTGGTGCTaGTGTTGTTGCCAACATACT +
Preference number: 4 (lower is better)
Translates to: FGLDCRTRVGRRVVIELEPHPWC*CCCQHT
Trigger: AGTATGTTGGCAACAACATCAGCACCAAGGGTGTGG...TTCCAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR TCA 90 bp CACATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCCACACCCTTGGTGCTaGTGTTGTTGCCAACATACT +
Preference number: 4 (lower is better)
Translates to: HMFGLDCRTRVGRRVVIEPHPWC*CCCQHT
Trigger: AGTATGTTGGCAACAACATCAGCACCAAGGGTGTGG...CTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACATGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR TCA 90 bp CCACTGTACTCTGTTAAACTCAGCAAACACTTCTCACACTGCTACGAAGGGTCTAGCACCTCTTTTTCCTaGAGAGACCCTTCAGGATAC +
Preference number: 4 (lower is better)
Translates to: PLYSVKLSKHFSHCYEGSSTSFS*RDPSGY
Trigger: GTATCCTGAAGGGTCTCTTCAGGAAAAAGAGGTGCT...AGACCCTTCGTAGCAGTGTGAGAAGTGTTTGCTGAGTTTAACAGAGTACAGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565459.1
CDS-3UTR TCA 90 bp AAACTCAGCAAACACTTCTCACACTGCTACGAAGGGTCTGTTTACTTATCTGACATTAACCAGCGTCACTaGGATCTGGGCATCCCCTCT +
Preference number: 4 (lower is better)
Translates to: KLSKHFSHCYEGSVYLSDINQRH*DLGIPS
Trigger: AGAGGGGATGCCCAGATCTCAGTGACGCTGGTTAAT...GTCAGATAAGTAAACAGACCCTTCGTAGCAGTGTGAGAAGTGTTTGCTGAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565459.1
CDS-3UTR TCA 90 bp ATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGTTCTCCTGCTCACTGTaGTTAACCAGCGTCACTGAG +
Preference number: 4 (lower is better)
Translates to: MFGLDCRTRVGRRVVIELFSCSL*LTSVTE
Trigger: CTCAGTGACGCTGGTTAATCACAGTGAGCAGGAGAA...CAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR TCA 90 bp TTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGGAATTCTCCTGCTCACTGTaGTTAACCAGCGTCACTGAG +
Preference number: 4 (lower is better)
Translates to: FGLDCRTRVGRRVVIELEFSCSL*LTSVTE
Trigger: CTCAGTGACGCTGGTTAATCACAGTGAGCAGGAGAA...TTCCAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR TCA 90 bp CACATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGGTTTTCAGGCCACACTaGACGGAATCTGTAGCTCCT +
Preference number: 4 (lower is better)
Translates to: HMFGLDCRTRVGRRVVIEVFRPH*TESVAP
Trigger: AGGAGCTACAGATTCCGTTCAGTGTGGCCTGAAAAC...CTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR TCA 90 bp CACATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCAGGGGCTACCACGGTaGCGCTTTTATAGTTGGTTA +
Preference number: 4 (lower is better)
Translates to: HMFGLDCRTRVGRRVVIEQGLPR*RFYSWL
Trigger: TAACCAACTATAAAAGCGTCACCGTGGTAGCCCCTG...CTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR TCA 90 bp ATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGCAGGGGCTACCACGGTaGCGCTTTTATAGTTGGTTA +
Preference number: 4 (lower is better)
Translates to: MFGLDCRTRVGRRVVIELQGLPR*RFYSWL
Trigger: TAACCAACTATAAAAGCGTCACCGTGGTAGCCCCTG...CAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR GCA 90 bp TTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGGAAAGGGCCTTGGTGTGGTaGTCCTCATTGTTTCTTGCT +
Preference number: 4 (lower is better)
Translates to: FGLDCRTRVGRRVVIELERALVW*SSLFLA
Trigger: AGCAAGAAACAATGAGGAGCACCACACCAAGGCCCT...TTCCAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR GCA 90 bp ATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGAGGGCCTTGGTGTGGTaGTCCTCATTGTTTCTTGCT +
Preference number: 4 (lower is better)
Translates to: MFGLDCRTRVGRRVVIELRALVW*SSLFLA
Trigger: AGCAAGAAACAATGAGGAGCACCACACCAAGGCCCT...CAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR GCA 90 bp ATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGGGATTCAGAGTGTGTTaGCATGGCGGTGAGTCTAAG +
Preference number: 4 (lower is better)
Translates to: MFGLDCRTRVGRRVVIELGFRVC*HGGESK
Trigger: CTTAGACTCACCGCCATGGCAACACACTCTGAATCC...CAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR GCA 90 bp TTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGGAAGGATTCAGAGTGTGTTaGCATGGCGGTGAGTCTAAG +
Preference number: 4 (lower is better)
Translates to: FGLDCRTRVGRRVVIELEGFRVC*HGGESK
Trigger: CTTAGACTCACCGCCATGGCAACACACTCTGAATCC...TTCCAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR GCA 90 bp CACATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGAGCATCCTCAGTTTGTaGAGTGAGGGCCACCTTCTT +
Preference number: 4 (lower is better)
Translates to: HMFGLDCRTRVGRRVVIESILSL*SEGHLL
Trigger: AAGAAGGTGGCCCTCACTGCACAAACTGAGGATGCT...CTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACATGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540029.5
CDS-3UTR CCA 90 bp ATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGCTGAGGGCCTTGGTGTaGTGCTCCTCATTGTTTCTT +
Preference number: 4 (lower is better)
Translates to: MFGLDCRTRVGRRVVIELLRALV*CSSLFL
Trigger: AAGAAACAATGAGGAGCACCACACCAAGGCCCTCAG...CAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR CCA 90 bp TTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGGAACTGAGGGCCTTGGTGTaGTGCTCCTCATTGTTTCTT +
Preference number: 4 (lower is better)
Translates to: FGLDCRTRVGRRVVIELELRALV*CSSLFL
Trigger: AAGAAACAATGAGGAGCACCACACCAAGGCCCTCAG...TTCCAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR CCA 90 bp CACATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGAGGGCCTTGGTGTaGTGCTCCTCATTGTTTCTT +
Preference number: 4 (lower is better)
Translates to: HMFGLDCRTRVGRRVVIELRALV*CSSLFL
Trigger: AAGAAACAATGAGGAGCACCACACCAAGGCCCTCAG...CTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACATGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR CCA 90 bp TTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGGAATTCGGTCCCCCAGACTaGAAATTGGGAATGTGGCTT +
Preference number: 4 (lower is better)
Translates to: FGLDCRTRVGRRVVIELEFGPPD*KLGMWL
Trigger: AAGCCACATTCCCAATTTCCAGTCTGGGGGACCGAA...TTCCAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441366.7
ENST00000648595.1
CDS-3UTR CCA 90 bp CACATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGTTCGGTCCCCCAGACTaGAAATTGGGAATGTGGCTT +
Preference number: 4 (lower is better)
Translates to: HMFGLDCRTRVGRRVVIEFGPPD*KLGMWL
Trigger: AAGCCACATTCCCAATTTCCAGTCTGGGGGACCGAA...CTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACATGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441366.7
ENST00000648595.1
CDS-3UTR CCA 90 bp TTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGGAATCCATTAGGAGCACTTaGGTGCAGAATCTGCCATCC +
Preference number: 4 (lower is better)
Translates to: FGLDCRTRVGRRVVIELESIRST*VQNLPS
Trigger: GGATGGCAGATTCTGCACCCAAGTGCTCCTAATGGA...TTCCAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR CCA 90 bp CACATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGCTCTGCTTTCTCTaGCATCTTGATGGCAAGGTG +
Preference number: 4 (lower is better)
Translates to: HMFGLDCRTRVGRRVVIELLCFL*HLDGKV
Trigger: CACCTTGCCATCAAGATGCCAGAGAAAGCAGAGCAG...CTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACATGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR CCA 90 bp TTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGGAACTGCTCTGCTTTCTCTaGCATCTTGATGGCAAGGTG +
Preference number: 4 (lower is better)
Translates to: FGLDCRTRVGRRVVIELELLCFL*HLDGKV
Trigger: CACCTTGCCATCAAGATGCCAGAGAAAGCAGAGCAG...TTCCAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR CCA 90 bp CACATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGGGAACTTGGCACACATaGTGTTTTCAGGCCACACTG +
Preference number: 4 (lower is better)
Translates to: HMFGLDCRTRVGRRVVIEGTWHT*CFQATL
Trigger: CAGTGTGGCCTGAAAACACCATGTGTGCCAAGTTCC...CTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR CCA 90 bp ATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGGGAACTTGGCACACATaGTGTTTTCAGGCCACACTG +
Preference number: 4 (lower is better)
Translates to: MFGLDCRTRVGRRVVIELGTWHT*CFQATL
Trigger: CAGTGTGGCCTGAAAACACCATGTGTGCCAAGTTCC...CAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR CCA 90 bp TTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGGAATGTGTTGGCGTGAACTaGAACTTGGCACACATGGTG +
Preference number: 4 (lower is better)
Translates to: FGLDCRTRVGRRVVIELECVGVN*NLAHMV
Trigger: CACCATGTGTGCCAAGTTCCAGTTCACGCCAACACA...TTCCAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR CCA 90 bp CACATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGTGTGTTGGCGTGAACTaGAACTTGGCACACATGGTG +
Preference number: 4 (lower is better)
Translates to: HMFGLDCRTRVGRRVVIECVGVN*NLAHMV
Trigger: CACCATGTGTGCCAAGTTCCAGTTCACGCCAACACA...CTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACATGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR TCA 90 bp ATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGAAAAGCAGTGTGAACTaGCCCAAGAGGAGTTGCTTC +
Preference number: 4 (lower is better)
Translates to: MFGLDCRTRVGRRVVIELKSSVN*PKRSCF
Trigger: GAAGCAACTCCTCTTGGGTCAGTTCACACTGCTTTT...CAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441366.7
ENST00000648595.1
CDS-3UTR TCA 90 bp TTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGGAAAAAAGCAGTGTGAACTaGCCCAAGAGGAGTTGCTTC +
Preference number: 4 (lower is better)
Translates to: FGLDCRTRVGRRVVIELEKSSVN*PKRSCF
Trigger: GAAGCAACTCCTCTTGGGTCAGTTCACACTGCTTTT...TTCCAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAA
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000441366.7
ENST00000648595.1
CDS-3UTR TCA 90 bp TTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGGAACTGTACCCAGGTAGATaGGACCATTCTGGTTCAACA +
Preference number: 4 (lower is better)
Translates to: FGLDCRTRVGRRVVIELELYPGR*DHSGST
Trigger: TGTTGAACCAGAATGGTCTCATCTACCTGGGTACAG...TTCCAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR TCA 90 bp ATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGCTGTACCCAGGTAGATaGGACCATTCTGGTTCAACA +
Preference number: 4 (lower is better)
Translates to: MFGLDCRTRVGRRVVIELLYPGR*DHSGST
Trigger: TGTTGAACCAGAATGGTCTCATCTACCTGGGTACAG...CAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR TCA 90 bp CACATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGTACCCAGGTAGATaGGACCATTCTGGTTCAACA +
Preference number: 4 (lower is better)
Translates to: HMFGLDCRTRVGRRVVIELYPGR*DHSGST
Trigger: TGTTGAACCAGAATGGTCTCATCTACCTGGGTACAG...CTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACATGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR TCA 90 bp TTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGGAATATAGTATTCATCTATaGGAAGACGCCCACCGGTGC +
Preference number: 4 (lower is better)
Translates to: FGLDCRTRVGRRVVIELEYSIHL*EDAHRC
Trigger: GCACCGGTGGGCGTCTTCTCATAGATGAATACTATA...TTCCAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR TCA 90 bp CACATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGTATAGTATTCATCTATaGGAAGACGCCCACCGGTGC +
Preference number: 4 (lower is better)
Translates to: HMFGLDCRTRVGRRVVIEYSIHL*EDAHRC
Trigger: GCACCGGTGGGCGTCTTCTCATAGATGAATACTATA...CTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACATGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR TCA 90 bp TTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGGAACTTCCAGACCACACATaGGGCATTTATGGCAGCAAA +
Preference number: 4 (lower is better)
Translates to: FGLDCRTRVGRRVVIELELPDHT*GIYGSK
Trigger: TTTGCTGCCATAAATGCCTCATGTGTGGTCTGGAAG...TTCCAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR TCA 90 bp ATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGCTTCCAGACCACACATaGGGCATTTATGGCAGCAAA +
Preference number: 4 (lower is better)
Translates to: MFGLDCRTRVGRRVVIELLPDHT*GIYGSK
Trigger: TTTGCTGCCATAAATGCCTCATGTGTGGTCTGGAAG...CAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR TCA 90 bp CACATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGAGCACCTCTTTTTCCTaGAGAGACCCTTCAGGATAC +
Preference number: 4 (lower is better)
Translates to: HMFGLDCRTRVGRRVVIESTSFS*RDPSGY
Trigger: GTATCCTGAAGGGTCTCTTCAGGAAAAAGAGGTGCT...CTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACATGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR TCA 90 bp TTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGGAAAGCACCTCTTTTTCCTaGAGAGACCCTTCAGGATAC +
Preference number: 4 (lower is better)
Translates to: FGLDCRTRVGRRVVIELESTSFS*RDPSGY
Trigger: GTATCCTGAAGGGTCTCTTCAGGAAAAAGAGGTGCT...TTCCAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR TCA 90 bp CACATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGATGGCAATGTCTTCCTaGGCAAAGCAGCTAAGGTTG +
Preference number: 4 (lower is better)
Translates to: HMFGLDCRTRVGRRVVIEMAMSS*AKQLRL
Trigger: CAACCTTAGCTGCTTTGCTCAGGAAGACATTGCCAT...CTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACATGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR TCA 90 bp TTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGGAAATGGCAATGTCTTCCTaGGCAAAGCAGCTAAGGTTG +
Preference number: 4 (lower is better)
Translates to: FGLDCRTRVGRRVVIELEMAMSS*AKQLRL
Trigger: CAACCTTAGCTGCTTTGCTCAGGAAGACATTGCCAT...TTCCAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR TCA 90 bp ATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGTTTAATGAAAACAGGTaGTGCTGCGGGGGCTGCATA +
Preference number: 4 (lower is better)
Translates to: MFGLDCRTRVGRRVVIELFNENR*CCGGCI
Trigger: TATGCAGCCCCCGCAGCATCACCTGTTTTCATTAAA...CAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648595.1
CDS-3UTR GCA 90 bp ATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGTTAGGAGCACTTGGGTaGAGAATCTGCCATCCATCA +
Preference number: 4 (lower is better)
Translates to: MFGLDCRTRVGRRVVIELLGALG*RICHPS
Trigger: TGATGGATGGCAGATTCTGCACCCAAGTGCTCCTAA...CAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR GCA 90 bp CACATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGTTAGGAGCACTTGGGTaGAGAATCTGCCATCCATCA +
Preference number: 4 (lower is better)
Translates to: HMFGLDCRTRVGRRVVIELGALG*RICHPS
Trigger: TGATGGATGGCAGATTCTGCACCCAAGTGCTCCTAA...CTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACATGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR CCA 90 bp TTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGGAATCAAACTGTTGCTTCTaGGCTCCTTCTGGGCTTTCT +
Preference number: 4 (lower is better)
Translates to: FGLDCRTRVGRRVVIELESNCCF*APSGLS
Trigger: AGAAAGCCCAGAAGGAGCCCAGAAGCAACAGTTTGA...TTCCAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR CCA 90 bp CACATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCACTCTGTGGAAGTCTaGAAGATCCAGATTCTGCCT +
Preference number: 4 (lower is better)
Translates to: HMFGLDCRTRVGRRVVIEHSVEV*KIQILP
Trigger: AGGCAGAATCTGGATCTTCCAGACTTCCACAGAGTG...CTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACATGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR CCA 90 bp TTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGGAACACTCTGTGGAAGTCTaGAAGATCCAGATTCTGCCT +
Preference number: 4 (lower is better)
Translates to: FGLDCRTRVGRRVVIELEHSVEV*KIQILP
Trigger: AGGCAGAATCTGGATCTTCCAGACTTCCACAGAGTG...TTCCAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR CCA 90 bp ATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGCACTCTGTGGAAGTCTaGAAGATCCAGATTCTGCCT +
Preference number: 4 (lower is better)
Translates to: MFGLDCRTRVGRRVVIELHSVEV*KIQILP
Trigger: AGGCAGAATCTGGATCTTCCAGACTTCCACAGAGTG...CAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR CCA 90 bp TTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGGAAGGTTTCGCTCAAAATTaGAGAAGAACAGGCCGATGG +
Preference number: 4 (lower is better)
Translates to: FGLDCRTRVGRRVVIELEGFAQN*RRTGRW
Trigger: CCATCGGCCTGTTCTTCTCCAATTTTGAGCGAAACC...TTCCAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR CCA 90 bp ATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGGGTTTCGCTCAAAATTaGAGAAGAACAGGCCGATGG +
Preference number: 4 (lower is better)
Translates to: MFGLDCRTRVGRRVVIELGFAQN*RRTGRW
Trigger: CCATCGGCCTGTTCTTCTCCAATTTTGAGCGAAACC...CAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR CCA 90 bp TTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGGAAGAAGGTGTTCTCGGGTaGGTTTCGCTCAAAATTGGA +
Preference number: 4 (lower is better)
Translates to: FGLDCRTRVGRRVVIELEEGVLG*VSLKIG
Trigger: TCCAATTTTGAGCGAAACCCACCCGAGAACACCTTC...TTCCAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR CCA 90 bp ATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGGAAGGTGTTCTCGGGTaGGTTTCGCTCAAAATTGGA +
Preference number: 4 (lower is better)
Translates to: MFGLDCRTRVGRRVVIELEGVLG*VSLKIG
Trigger: TCCAATTTTGAGCGAAACCCACCCGAGAACACCTTC...CAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR GCA 90 bp TTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGGAACTCCTCATTGTTTCTTaGTGCCTGAAAGTCACAGCT +
Preference number: 4 (lower is better)
Translates to: FGLDCRTRVGRRVVIELELLIVS*CLKVTA
Trigger: AGCTGTGACTTTCAGGCAGCAAGAAACAATGAGGAG...TTCCAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR GCA 90 bp ATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGCTCCTCATTGTTTCTTaGTGCCTGAAAGTCACAGCT +
Preference number: 4 (lower is better)
Translates to: MFGLDCRTRVGRRVVIELLLIVS*CLKVTA
Trigger: AGCTGTGACTTTCAGGCAGCAAGAAACAATGAGGAG...CAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR GCA 90 bp CACATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGTCAACAAGTACTCCATaGGCTGAGCCTCATTCTTCA +
Preference number: 4 (lower is better)
Translates to: HMFGLDCRTRVGRRVVIESTSTP*AEPHSS
Trigger: TGAAGAATGAGGCTCAGCGCATGGAGTACTTGTTGA...CTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACATGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR GCA 90 bp TTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGGAATCAACAAGTACTCCATaGGCTGAGCCTCATTCTTCA +
Preference number: 4 (lower is better)
Translates to: FGLDCRTRVGRRVVIELESTSTP*AEPHSS
Trigger: TGAAGAATGAGGCTCAGCGCATGGAGTACTTGTTGA...TTCCAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR GCA 90 bp TTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGGAAGGGTTGATACTGCTCTaGTTTCTCTGGCATCTTGAT +
Preference number: 4 (lower is better)
Translates to: FGLDCRTRVGRRVVIELEGLILL*FLWHLD
Trigger: ATCAAGATGCCAGAGAAAGCAGAGCAGTATCAACCC...TTCCAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR GCA 90 bp CACATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGGGGTTGATACTGCTCTaGTTTCTCTGGCATCTTGAT +
Preference number: 4 (lower is better)
Translates to: HMFGLDCRTRVGRRVVIEGLILL*FLWHLD
Trigger: ATCAAGATGCCAGAGAAAGCAGAGCAGTATCAACCC...CTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACATGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR CCA 90 bp ATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGATTGGGAATGTGGCTTaGGTCCTGTTGATCTTGGAA +
Preference number: 4 (lower is better)
Translates to: MFGLDCRTRVGRRVVIELIGNVA*VLLILE
Trigger: TTCCAAGATCAACAGGACCCAAGCCACATTCCCAAT...CAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441366.7
ENST00000648595.1
CDS-3UTR CCA 90 bp TTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGGAAATTGGGAATGTGGCTTaGGTCCTGTTGATCTTGGAA +
Preference number: 4 (lower is better)
Translates to: FGLDCRTRVGRRVVIELEIGNVA*VLLILE
Trigger: TTCCAAGATCAACAGGACCCAAGCCACATTCCCAAT...TTCCAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441366.7
ENST00000648595.1
CDS-3UTR CCA 90 bp CACATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTTGATGGCAAGGTGTaGTCTACAAATGGCAATGTC +
Preference number: 4 (lower is better)
Translates to: HMFGLDCRTRVGRRVVIELDGKV*STNGNV
Trigger: GACATTGCCATTTGTAGACCACACCTTGCCATCAAG...CTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACATGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR CCA 90 bp TTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGGAACTTGATGGCAAGGTGTaGTCTACAAATGGCAATGTC +
Preference number: 4 (lower is better)
Translates to: FGLDCRTRVGRRVVIELELDGKV*STNGNV
Trigger: GACATTGCCATTTGTAGACCACACCTTGCCATCAAG...TTCCAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR CCA 90 bp TCAGCAAACACTTCTCACACTGCTACGAAGGGTCTGTTTACTTATCTGACTGCAGCAGTACAATTTATTTaGGGGCAGCTTATTCCAGCC +
Preference number: 4 (lower is better)
Translates to: SANTSHTATKGLFTYLTAAVQFI*GQLIPA
Trigger: GGCTGGAATAAGCTGCCCCCAAATAAATTGTACTGC...TGCAGTCAGATAAGTAAACAGACCCTTCGTAGCAGTGTGAGAAGTGTTTGCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565459.1
CDS-3UTR GCA 90 bp CACATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTCATTGTTTCTTGCTaGCTGAAAGTCACAGCTCTT +
Preference number: 4 (lower is better)
Translates to: HMFGLDCRTRVGRRVVIELIVSC*LKVTAL
Trigger: AAGAGCTGTGACTTTCAGGCAGCAAGAAACAATGAG...CTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACATGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR GCA 90 bp TTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGGAACTCATTGTTTCTTGCTaGCTGAAAGTCACAGCTCTT +
Preference number: 4 (lower is better)
Translates to: FGLDCRTRVGRRVVIELELIVSC*LKVTAL
Trigger: AAGAGCTGTGACTTTCAGGCAGCAAGAAACAATGAG...TTCCAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR CCA 90 bp ATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGCACATGAGGCATTTATaGCAGCAAAAAGGTCTGACA +
Preference number: 4 (lower is better)
Translates to: MFGLDCRTRVGRRVVIELHMRHL*QQKGLT
Trigger: TGTCAGACCTTTTTGCTGCCATAAATGCCTCATGTG...CAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR CCA 90 bp CACATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCACATGAGGCATTTATaGCAGCAAAAAGGTCTGACA +
Preference number: 4 (lower is better)
Translates to: HMFGLDCRTRVGRRVVIEHMRHL*QQKGLT
Trigger: TGTCAGACCTTTTTGCTGCCATAAATGCCTCATGTG...CTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACATGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR CCA 90 bp CACATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCAACATACTTTGTGTTaGAGTCAGTCAACTCCAGTG +
Preference number: 4 (lower is better)
Translates to: HMFGLDCRTRVGRRVVIEQHTLC*SQSTPV
Trigger: CACTGGAGTTGACTGACTCCAACACAAAGTATGTTG...CTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACATGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR CCA 90 bp TTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGGAACAACATACTTTGTGTTaGAGTCAGTCAACTCCAGTG +
Preference number: 4 (lower is better)
Translates to: FGLDCRTRVGRRVVIELEQHTLC*SQSTPV
Trigger: CACTGGAGTTGACTGACTCCAACACAAAGTATGTTG...TTCCAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR CCA 90 bp ATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGCAACATACTTTGTGTTaGAGTCAGTCAACTCCAGTG +
Preference number: 4 (lower is better)
Translates to: MFGLDCRTRVGRRVVIELQHTLC*SQSTPV
Trigger: CACTGGAGTTGACTGACTCCAACACAAAGTATGTTG...CAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR TCA 90 bp TTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGGAATCCAGACAGAAAATATaGAGGCACTTTTGTTGGCTT +
Preference number: 4 (lower is better)
Translates to: FGLDCRTRVGRRVVIELESRQKI*RHFCWL
Trigger: AAGCCAACAAAAGTGCCTTCATATTTTCTGTCTGGA...TTCCAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR TCA 90 bp CACATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGTCCAGACAGAAAATATaGAGGCACTTTTGTTGGCTT +
Preference number: 4 (lower is better)
Translates to: HMFGLDCRTRVGRRVVIESRQKI*RHFCWL
Trigger: AAGCCAACAAAAGTGCCTTCATATTTTCTGTCTGGA...CTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACATGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR CCA 90 bp TTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGGAAAGAAGAACAGGCCGATaGTTATTATCTTTTCCAGGT +
Preference number: 4 (lower is better)
Translates to: FGLDCRTRVGRRVVIELERRTGR*LLSFPG
Trigger: ACCTGGAAAAGATAATAACCATCGGCCTGTTCTTCT...TTCCAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR CCA 90 bp ATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGAGAAGAACAGGCCGATaGTTATTATCTTTTCCAGGT +
Preference number: 4 (lower is better)
Translates to: MFGLDCRTRVGRRVVIELRRTGR*LLSFPG
Trigger: ACCTGGAAAAGATAATAACCATCGGCCTGTTCTTCT...CAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR CCA 90 bp CACATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGAGAAGAACAGGCCGATaGTTATTATCTTTTCCAGGT +
Preference number: 4 (lower is better)
Translates to: HMFGLDCRTRVGRRVVIERRTGR*LLSFPG
Trigger: ACCTGGAAAAGATAATAACCATCGGCCTGTTCTTCT...CTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACATGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS GCA 90 bp CAGGCCTGGCCATCATACACAGGTCGGCCTCGGCCGGTGAGCCACTaGCGCAGGATGGGCACGCTGCCCCGGCGCTTGTTCAGCAAGGCC +
Preference number: 5 (lower is better)
Translates to: QAWPSYTGRPRPVSH*RRMGTLPRRLFSKA
Trigger: GGCCTTGCTGAACAAGCGCCGGGGCAGCGTGCCCATCCTGCGGCAGTGGCTCACCGGCCGAGGCCGACCTGTGTATGATGGCCAGGCCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000567019.2
ENST00000569204.1
ENST00000648595.1
CDS TCA 90 bp CCAACACCCAGGCCTGGCCATCATACACAGGTCGGCCTCGGCCGGTaGGCCACTGCCGCAGGATGGGCACGCTGCCCCGGCGCTTGTTCA +
Preference number: 5 (lower is better)
Translates to: PTPRPGHHTQVGLGR*ATAAGWARCPGACS
Trigger: TGAACAAGCGCCGGGGCAGCGTGCCCATCCTGCGGCAGTGGCTCACCGGCCGAGGCCGACCTGTGTATGATGGCCAGGCCTGGGTGTTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000567019.2
ENST00000569204.1
ENST00000648595.1
CDS CCA 90 bp AGGCATCGCAGCACTGTGCAAGCAACAGCAGCCAACACCCAGGCCTaGCCATCATACACAGGTCGGCCTCGGCCGGTGAGCCACTGCCGC +
Preference number: 5 (lower is better)
Translates to: RHRSTVQATAANTQA*PSYTGRPRPVSHCR
Trigger: GCGGCAGTGGCTCACCGGCCGAGGCCGACCTGTGTATGATGGCCAGGCCTGGGTGTTGGCTGCTGTTGCTTGCACAGTGCTGCGATGCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000567019.2
ENST00000569204.1
ENST00000648595.1
CDS CCA 90 bp GTCCAGCAAGCCCTGTCGAGCGCTGGCTTGGCTCACCCTGTCCCATaGTTGCAGGCCGCTCCTCTTATCCACTTGGCCGCAGAAAGCGCC +
Preference number: 5 (lower is better)
Translates to: VQQALSSAGLAHPVP*LQAAPLIHLAAESA
Trigger: GGCGCTTTCTGCGGCCAAGTGGATAAGAGGAGCGGCCTGCAACCATGGGACAGGGTGAGCCAAGCCAGCGCTCGACAGGGCTTGCTGGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648595.1
CDS GCA 90 bp AGCAAGCCCTGTCGAGCGCTGGCTTGGCTCACCCTGTCCCATGGTTaGAGGCCGCTCCTCTTATCCACTTGGCCGCAGAAAGCGCCTCTC +
Preference number: 5 (lower is better)
Translates to: SKPCRALAWLTLSHG*RPLLLSTWPQKAPL
Trigger: GAGAGGCGCTTTCTGCGGCCAAGTGGATAAGAGGAGCGGCCTGCAACCATGGGACAGGGTGAGCCAAGCCAGCGCTCGACAGGGCTTGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648595.1
CDS CCA 90 bp TGCGGGGGCTGCATACAGTCCAGCAAGCCCTGTCGAGCGCTGGCTTaGCTCACCCTGTCCCATGGTTGCAGGCCGCTCCTCTTATCCACT +
Preference number: 5 (lower is better)
Translates to: CGGCIQSSKPCRALA*LTLSHGCRPLLLST
Trigger: AGTGGATAAGAGGAGCGGCCTGCAACCATGGGACAGGGTGAGCCAAGCCAGCGCTCGACAGGGCTTGCTGGACTGTATGCAGCCCCCGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648595.1
CDS CCA 90 bp GATGCTGCGGGGGCTGCATACAGTCCAGCAAGCCCTGTCGAGCGCTaGCTTGGCTCACCCTGTCCCATGGTTGCAGGCCGCTCCTCTTAT +
Preference number: 5 (lower is better)
Translates to: DAAGAAYSPASPVER*LGSPCPMVAGRSSY
Trigger: ATAAGAGGAGCGGCCTGCAACCATGGGACAGGGTGAGCCAAGCCAGCGCTCGACAGGGCTTGCTGGACTGTATGCAGCCCCCGCAGCATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648595.1
CDS GCA 90 bp CCCAACACACGGGCCACGTGCACCGGCTGGCTCCACTTCTCTACCTaGTTGTCCTTGCTCAGCAAGCGCAGGCTGAGGTCAATGACATCC +
Preference number: 5 (lower is better)
Translates to: PNTRATCTGWLHFST*LSLLSKRRLRSMTS
Trigger: GGATGTCATTGACCTCAGCCTGCGCTTGCTGAGCAAGGACAAGCAGGTAGAGAAGTGGAGCCAGCCGGTGCACGTGGCCCGTGTGTTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS CCA 90 bp TGCAGTGAGGGCCACCTTCTTCAGGGCAGGCAGAAATGCACGGACTaGAGCGCGGAAGTACAGGATGATGGTGAAGGGCTGCCCCCTCCT +
Preference number: 5 (lower is better)
Translates to: CSEGHLLQGRQKCTD*SAEVQDDGEGLPPP
Trigger: AGGAGGGGGCAGCCCTTCACCATCATCCTGTACTTCCGCGCTCCAGTCCGTGCATTTCTGCCTGCCCTGAAGAAGGTGGCCCTCACTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS TCA 90 bp GTTGCTTCCTGCCTGAGACCTGCAGCAGAAGCGAGTAGTGGCCAATaGCAGCGTCCGCAGGTGTGGTCACAGAGATGGTCCAGGACTGGG +
Preference number: 5 (lower is better)
Translates to: VASCLRPAAEASSGQ*QRPQVWSQRWSRTG
Trigger: CCCAGTCCTGGACCATCTCTGTGACCACACCTGCGGACGCTGTCATTGGCCACTACTCGCTTCTGCTGCAGGTCTCAGGCAGGAAGCAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441366.7
ENST00000648595.1
CDS CCA 90 bp ACCCAGGGCCTGTCCCATGGTTGCAGGCCGCTCCTCTTATCCACTTaGCCGCAGAAAGCGCCTCTCTCAAACTGTTGCTTCTGGGCTCCT +
Preference number: 5 (lower is better)
Translates to: TQGLSHGCRPLLLST*PQKAPLSNCCFWAP
Trigger: AGGAGCCCAGAAGCAACAGTTTGAGAGAGGCGCTTTCTGCGGCCAAGTGGATAAGAGGAGCGGCCTGCAACCATGGGACAGGCCCTGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441366.7
ENST00000540029.5
CDS CCA 90 bp AGAAAATGCAGCAAGGCACCCAACACACGGGCCACGTGCACCGGCTaGCTCCACTTCTCTACCTGCTTGTCCTTGCTCAGCAAGCGCAGG +
Preference number: 5 (lower is better)
Translates to: RKCSKAPNTRATCTG*LHFSTCLSLLSKRR
Trigger: CCTGCGCTTGCTGAGCAAGGACAAGCAGGTAGAGAAGTGGAGCCAGCCGGTGCACGTGGCCCGTGTGTTGGGTGCCTTGCTGCATTTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS GCA 90 bp GCGCCGGGAGCTGAGGGCCTTGGTGTGGTGCTCCTCATTGTTTCTTaGTGCCTGAAAGTCACAGCTCTTGATACCCAGGGCATCCATCCC +
Preference number: 5 (lower is better)
Translates to: APGAEGLGVVLLIVS*CLKVTALDTQGIHP
Trigger: GGGATGGATGCCCTGGGTATCAAGAGCTGTGACTTTCAGGCAGCAAGAAACAATGAGGAGCACCACACCAAGGCCCTCAGCTCCCGGCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648595.1
CDS CCA 90 bp TGGCTCACCCTGTCCCATGGTTGCAGGCCGCTCCTCTTATCCACTTaGCCGCAGAAAGCGCCTCTCTCAAACTGTTGCTTCTGGGCTCCT +
Preference number: 5 (lower is better)
Translates to: WLTLSHGCRPLLLST*PQKAPLSNCCFWAP
Trigger: AGGAGCCCAGAAGCAACAGTTTGAGAGAGGCGCTTTCTGCGGCCAAGTGGATAAGAGGAGCGGCCTGCAACCATGGGACAGGGTGAGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648595.1
CDS GCA 90 bp TCCAGTTTGTGCAGTGAGGGCCACCTTCTTCAGGGCAGGCAGAAATaGACGGACTGGAGCGCGGAAGTACAGGATGATGGTGAAGGGCTG +
Preference number: 5 (lower is better)
Translates to: SSLCSEGHLLQGRQK*TDWSAEVQDDGEGL
Trigger: CAGCCCTTCACCATCATCCTGTACTTCCGCGCTCCAGTCCGTGCATTTCTGCCTGCCCTGAAGAAGGTGGCCCTCACTGCACAAACTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441366.7
ENST00000648595.1
CDS GCA 90 bp CTCAGTTTGTGCAGTGAGGGCCACCTTCTTCAGGGCAGGCAGAAATaGACGGACTGGAGCGCGGAAGTACAGGATGATGGTGAAGGGCTG +
Preference number: 5 (lower is better)
Translates to: LSLCSEGHLLQGRQK*TDWSAEVQDDGEGL
Trigger: CAGCCCTTCACCATCATCCTGTACTTCCGCGCTCCAGTCCGTGCATTTCTGCCTGCCCTGAAGAAGGTGGCCCTCACTGCACAAACTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540029.5
CDS CCA 90 bp TCAGGGGTAGGGAGCTGGGTGCTTTCAAGAGCAGGTACAGAGGACTaGCAGTCTCGAGACTGGGAGGACGGATGCCGTTGTCTTTCTCAC +
Preference number: 5 (lower is better)
Translates to: SGVGSWVLSRAGTED*QSRDWEDGCRCLSH
Trigger: GTGAGAAAGACAACGGCATCCGTCCTCCCAGTCTCGAGACTGCCAGTCCTCTGTACCTGCTCTTGAAAGCACCCAGCTCCCTACCCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000565459.1
ENST00000567019.2
ENST00000648595.1
CDS TCA 90 bp ATTATAGTATTCATCTATGAGAAGACGCCCACCGGTGCCCTGTGCTaGGGCAAACGTGGTCACCACGCGGGCAGGGATTCCCAGGCATCG +
Preference number: 5 (lower is better)
Translates to: IIVFIYEKTPTGALC*GKRGHHAGRDSQAS
Trigger: CGATGCCTGGGAATCCCTGCCCGCGTGGTGACCACGTTTGCCTCAGCACAGGGCACCGGTGGGCGTCTTCTCATAGATGAATACTATAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000567019.2
ENST00000569204.1
ENST00000648595.1
CDS GCA 90 bp CCGGGAGCTGAGGGCCTTGGTGTGGTGCTCCTCATTGTTTCTTGCTaGCTGAAAGTCACAGCTCTTGATACCCAGGGCATCCATCCCACT +
Preference number: 5 (lower is better)
Translates to: PGAEGLGVVLLIVSC*LKVTALDTQGIHPT
Trigger: AGTGGGATGGATGCCCTGGGTATCAAGAGCTGTGACTTTCAGGCAGCAAGAAACAATGAGGAGCACCACACCAAGGCCCTCAGCTCCCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648595.1
CDS CCA 90 bp CTCCACCACTGCACTCCACCACTTTCGGTCCCCCAGACTGGAAATTaGGAATGTGGCTTGGGTCCTGTTGATCTTGGAAGGCTGCTCTCC +
Preference number: 5 (lower is better)
Translates to: LHHCTPPLSVPQTGN*ECGLGPVDLGRLLS
Trigger: GGAGAGCAGCCTTCCAAGATCAACAGGACCCAAGCCACATTCCCAATTTCCAGTCTGGGGGACCGAAAGTGGTGGAGTGCAGTGGTGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441366.7
ENST00000648595.1
CDS TCA 90 bp GAGCTGAGGGCCTTGGTGTGGTGCTCCTCATTGTTTCTTGCTGCCTaGAAGTCACAGCTCTTGATACCCAGGGCCTGTCCCATGGTTGCA +
Preference number: 5 (lower is better)
Translates to: ELRALVWCSSLFLAA*KSQLLIPRACPMVA
Trigger: TGCAACCATGGGACAGGCCCTGGGTATCAAGAGCTGTGACTTTCAGGCAGCAAGAAACAATGAGGAGCACCACACCAAGGCCCTCAGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441366.7
ENST00000540029.5
CDS TCA 90 bp GGGGCATCTAGGGAGTTCTGGAGGCTGACTGAGGCTGTGAGGGGTTaGTACTGCTCTGCTTTCTCTGGCATCTTGATGGCAAGGTGTGGT +
Preference number: 5 (lower is better)
Translates to: GASREFWRLTEAVRG*YCSAFSGILMARCG
Trigger: ACCACACCTTGCCATCAAGATGCCAGAGAAAGCAGAGCAGTATCAACCCCTCACAGCCTCAGTCAGCCTCCAGAACTCCCTAGATGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000567019.2
ENST00000648595.1
CDS TCA 90 bp CTTGATACCCAGGGCATCCATCCCACTTCCTTTAATGAAAACAGGTaGTGCTGCGGGGGCTGCATACAGTCCAGCAAGCCCTGTCGAGCG +
Preference number: 5 (lower is better)
Translates to: LDTQGIHPTSFNENR*CCGGCIQSSKPCRA
Trigger: CGCTCGACAGGGCTTGCTGGACTGTATGCAGCCCCCGCAGCATCACCTGTTTTCATTAAAGGAAGTGGGATGGATGCCCTGGGTATCAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648595.1
CDS GCA 90 bp CTTGGCAGCAAGGACACCGTTGTAGTGTACAGCCTGGACCCCAATTaGCAGCTGCACTGCCTTCTCCTGCTCACTGTGATTAACCAGCGT +
Preference number: 5 (lower is better)
Translates to: LGSKDTVVVYSLDPN*QLHCLLLLTVINQR
Trigger: ACGCTGGTTAATCACAGTGAGCAGGAGAAGGCAGTGCAGCTGGCAATTGGGGTCCAGGCTGTACACTACAACGGTGTCCTTGCTGCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000565459.1
ENST00000567019.2
ENST00000648595.1
CDS TCA 90 bp GTTAAAAAGCAGTGTGAACTGACCCAAGAGGAGTTGCTTCCTGCCTaGGACCTGCAGCAGAAGCGAGTAGTGGCCAATGACAGCGTCCGC +
Preference number: 5 (lower is better)
Translates to: VKKQCELTQEELLPA*DLQQKRVVANDSVR
Trigger: GCGGACGCTGTCATTGGCCACTACTCGCTTCTGCTGCAGGTCTCAGGCAGGAAGCAACTCCTCTTGGGTCAGTTCACACTGCTTTTTAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441366.7
ENST00000648595.1
CDS TCA 90 bp GAGCTGAGGGCCTTGGTGTGGTGCTCCTCATTGTTTCTTGCTGCCTaGAAGTCACAGCTCTTGATACCCAGGGCATCCATCCCACTTCCT +
Preference number: 5 (lower is better)
Translates to: ELRALVWCSSLFLAA*KSQLLIPRASIPLP
Trigger: AGGAAGTGGGATGGATGCCCTGGGTATCAAGAGCTGTGACTTTCAGGCAGCAAGAAACAATGAGGAGCACCACACCAAGGCCCTCAGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648595.1
CDS CCA 90 bp CTCCACCACTTTCGGTCCCCCAGACTGGAAATTGGGAATGTGGCTTaGGTCCTGTTGATCTTGGAAGGCTGCTCTCCAGTTTGTGCAGTG +
Preference number: 5 (lower is better)
Translates to: LHHFRSPRLEIGNVA*VLLILEGCSPVCAV
Trigger: CACTGCACAAACTGGAGAGCAGCCTTCCAAGATCAACAGGACCCAAGCCACATTCCCAATTTCCAGTCTGGGGGACCGAAAGTGGTGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441366.7
ENST00000648595.1
CDS CCA 90 bp GTTGCAGTCCACTTCCACAGTGAGTCTCTGGAGCCCCACATGTGTTaGCGTGAACTGGAACTTGGCACACATGGTGTTTTCAGGCCACAC +
Preference number: 5 (lower is better)
Translates to: VAVHFHSESLEPHMC*RELELGTHGVFRPH
Trigger: GTGTGGCCTGAAAACACCATGTGTGCCAAGTTCCAGTTCACGCCAACACATGTGGGGCTCCAGAGACTCACTGTGGAAGTGGACTGCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000567019.2
ENST00000648595.1
CDS-3UTR CAA 90 bp CACATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGACGCTGCCCCGGCGCTaGTTCAGCAAGGCCCCTTCC +
Preference number: 5 (lower is better)
Translates to: HMFGLDCRTRVGRRVVIETLPRR*FSKAPS
Trigger: GGAAGGGGCCTTGCTGAACAAGCGCCGGGGCAGCGT...CTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACATGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR CAA 90 bp ATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGACGCTGCCCCGGCGCTaGTTCAGCAAGGCCCCTTCC +
Preference number: 5 (lower is better)
Translates to: MFGLDCRTRVGRRVVIELTLPRR*FSKAPS
Trigger: GGAAGGGGCCTTGCTGAACAAGCGCCGGGGCAGCGT...CAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR CAA 90 bp CACATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCCCAGCGTCCCCTCCTaGACTGCTCTGACCGGCACC +
Preference number: 5 (lower is better)
Translates to: HMFGLDCRTRVGRRVVIEPSVPS*TALTGT
Trigger: GGTGCCGGTCAGAGCAGTCAAGGAGGGGACGCTGGG...CTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACATGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR CAA 90 bp TTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGGAACCCAGCGTCCCCTCCTaGACTGCTCTGACCGGCACC +
Preference number: 5 (lower is better)
Translates to: FGLDCRTRVGRRVVIELEPSVPS*TALTGT
Trigger: GGTGCCGGTCAGAGCAGTCAAGGAGGGGACGCTGGG...TTCCAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR CAA 90 bp ATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGCCCAGCGTCCCCTCCTaGACTGCTCTGACCGGCACC +
Preference number: 5 (lower is better)
Translates to: MFGLDCRTRVGRRVVIELPSVPS*TALTGT
Trigger: GGTGCCGGTCAGAGCAGTCAAGGAGGGGACGCTGGG...CAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS TCA 90 bp GGCCTTCTCCGTTCTGAAGTCCCTCCTCATTATAGTATTCATCTATaGGAAGACGCCCACCGGTGCCCTGTGCTGAGGCAAACGTGGTCA +
Preference number: 5 (lower is better)
Translates to: GLLRSEVPPHYSIHL*EDAHRCPVLRQTWS
Trigger: TGACCACGTTTGCCTCAGCACAGGGCACCGGTGGGCGTCTTCTCATAGATGAATACTATAATGAGGAGGGACTTCAGAACGGAGAAGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000567019.2
ENST00000569204.1
ENST00000648595.1
CDS-3UTR CAA 90 bp TTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGGAACTGTCGAGCGCTGGCTaGGCTCACCCTGTCCCATGG +
Preference number: 5 (lower is better)
Translates to: FGLDCRTRVGRRVVIELELSSAG*AHPVPW
Trigger: CCATGGGACAGGGTGAGCCAAGCCAGCGCTCGACAG...TTCCAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648595.1
CDS GCA 90 bp AGAGCAGGTACAGAGGACTGGCAGTCTCGAGACTGGGAGGACGGATaGCGTTGTCTTTCTCACGTTCCATTTTCTCTTTCTCGACTCTCT +
Preference number: 5 (lower is better)
Translates to: RAGTEDWQSRDWEDG*RCLSHVPFSLSRLS
Trigger: AGAGAGTCGAGAAAGAGAAAATGGAACGTGAGAAAGACAACGGCATCCGTCCTCCCAGTCTCGAGACTGCCAGTCCTCTGTACCTGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000565459.1
ENST00000567019.2
ENST00000648595.1
CDS CCA 90 bp TGGGTGCTTTCAAGAGCAGGTACAGAGGACTGGCAGTCTCGAGACTaGGAGGACGGATGCCGTTGTCTTTCTCACGTTCCATTTTCTCTT +
Preference number: 5 (lower is better)
Translates to: WVLSRAGTEDWQSRD*EDGCRCLSHVPFSL
Trigger: AAGAGAAAATGGAACGTGAGAAAGACAACGGCATCCGTCCTCCCAGTCTCGAGACTGCCAGTCCTCTGTACCTGCTCTTGAAAGCACCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000565459.1
ENST00000567019.2
ENST00000648595.1
CDS CCA 90 bp ACTTCCACAGTGAGTCTCTGGAGCCCCACATGTGTTGGCGTGAACTaGAACTTGGCACACATGGTGTTTTCAGGCCACACTGAACGGAAT +
Preference number: 5 (lower is better)
Translates to: TSTVSLWSPTCVGVN*NLAHMVFSGHTERN
Trigger: ATTCCGTTCAGTGTGGCCTGAAAACACCATGTGTGCCAAGTTCCAGTTCACGCCAACACATGTGGGGCTCCAGAGACTCACTGTGGAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000567019.2
ENST00000648595.1
CDS CCA 90 bp GTTAGGTTCTGGAACATGTTGCAGTCCACTTCCACAGTGAGTCTCTaGAGCCCCACATGTGTTGGCGTGAACTGGAACTTGGCACACATG +
Preference number: 5 (lower is better)
Translates to: VRFWNMLQSTSTVSL*SPTCVGVNWNLAHM
Trigger: CATGTGTGCCAAGTTCCAGTTCACGCCAACACATGTGGGGCTCCAGAGACTCACTGTGGAAGTGGACTGCAACATGTTCCAGAACCTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000567019.2
ENST00000648595.1
CDS-3UTR CAA 90 bp TTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGGAAGGGCCTGTCCCATGGTaGCAGGCCGCTCCTCTTATC +
Preference number: 5 (lower is better)
Translates to: FGLDCRTRVGRRVVIELEGPVPW*QAAPLI
Trigger: GATAAGAGGAGCGGCCTGCAACCATGGGACAGGCCC...TTCCAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441366.7
ENST00000540029.5
CDS-3UTR CAA 90 bp CACATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGGGGCCTGTCCCATGGTaGCAGGCCGCTCCTCTTATC +
Preference number: 5 (lower is better)
Translates to: HMFGLDCRTRVGRRVVIEGPVPW*QAAPLI
Trigger: GATAAGAGGAGCGGCCTGCAACCATGGGACAGGCCC...CTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACATGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441366.7
ENST00000540029.5
CDS-3UTR CAA 90 bp CACATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCGGGAGCTGAGGGCCTaGGTGTGGTGCTCCTCATTG +
Preference number: 5 (lower is better)
Translates to: HMFGLDCRTRVGRRVVIERELRA*VWCSSL
Trigger: CAATGAGGAGCACCACACCAAGGCCCTCAGCTCCCG...CTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACATGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR CAA 90 bp TTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGGAACGGGAGCTGAGGGCCTaGGTGTGGTGCTCCTCATTG +
Preference number: 5 (lower is better)
Translates to: FGLDCRTRVGRRVVIELERELRA*VWCSSL
Trigger: CAATGAGGAGCACCACACCAAGGCCCTCAGCTCCCG...TTCCAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS TCA 90 bp AACACAGCATCCTCTCTATTCCAGGGGTTAAAAAGCAGTGTGAACTaGCCCAAGAGGAGTTGCTTCCTGCCTGAGACCTGCAGCAGAAGC +
Preference number: 5 (lower is better)
Translates to: NTASSLFQGLKSSVN*PKRSCFLPETCSRS
Trigger: GCTTCTGCTGCAGGTCTCAGGCAGGAAGCAACTCCTCTTGGGTCAGTTCACACTGCTTTTTAACCCCTGGAATAGAGAGGATGCTGTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000569204.1
ENST00000648595.1
CDS-3UTR CAA 90 bp TCACACTGCTACGAAGGGTCTGTTTACTTATCTGACTGCAGTTGGCATCGTGTTAGAGCATTACCCAGGTaGGCACTGAGCGTGAGGTGC +
Preference number: 5 (lower is better)
Translates to: SHCYEGSVYLSDCSWHRVRALPR*ALSVRC
Trigger: GCACCTCACGCTCAGTGCCAACCTGGGTAATGCTCT...AACACGATGCCAACTGCAGTCAGATAAGTAAACAGACCCTTCGTAGCAGTGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565459.1
CDS-3UTR CAA 90 bp ATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGCACCCTGTCCCATGGTaGCAGGCCGCTCCTCTTATC +
Preference number: 5 (lower is better)
Translates to: MFGLDCRTRVGRRVVIELHPVPW*QAAPLI
Trigger: GATAAGAGGAGCGGCCTGCAACCATGGGACAGGGTG...CAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648595.1
CDS-3UTR CAA 90 bp CACATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGGCTCCTCTTATCCACTaGGCCGCAGAAAGCGCCTCT +
Preference number: 5 (lower is better)
Translates to: HMFGLDCRTRVGRRVVIEAPLIH*AAESAS
Trigger: AGAGGCGCTTTCTGCGGCCAAGTGGATAAGAGGAGC...CTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR CAA 90 bp TTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGGAAGCTCCTCTTATCCACTaGGCCGCAGAAAGCGCCTCT +
Preference number: 5 (lower is better)
Translates to: FGLDCRTRVGRRVVIELEAPLIH*AAESAS
Trigger: AGAGGCGCTTTCTGCGGCCAAGTGGATAAGAGGAGC...TTCCAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR CAA 90 bp CACATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCCCCCAGACTGGAAATaGGGAATGTGGCTTGGGTCC +
Preference number: 5 (lower is better)
Translates to: HMFGLDCRTRVGRRVVIEPPDWK*GMWLGS
Trigger: GGACCCAAGCCACATTCCCAATTTCCAGTCTGGGGG...CTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACATGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441366.7
ENST00000648595.1
CDS-3UTR CAA 90 bp ATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGTCTACCTGCTTGTCCTaGCTCAGCAAGCGCAGGCTG +
Preference number: 5 (lower is better)
Translates to: MFGLDCRTRVGRRVVIELSTCLS*LSKRRL
Trigger: CAGCCTGCGCTTGCTGAGCAAGGACAAGCAGGTAGA...CAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR CAA 90 bp TTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGGAATCTACCTGCTTGTCCTaGCTCAGCAAGCGCAGGCTG +
Preference number: 5 (lower is better)
Translates to: FGLDCRTRVGRRVVIELESTCLS*LSKRRL
Trigger: CAGCCTGCGCTTGCTGAGCAAGGACAAGCAGGTAGA...TTCCAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS CCA 90 bp AGAGTGTGTTGCCATGGCGGTGAGTCTAAGGAAGGTGTTCTCGGGTaGGTTTCGCTCAAAATTGGAGAAGAACAGGCCGATGGTTATTAT +
Preference number: 5 (lower is better)
Translates to: RVCCHGGESKEGVLG*VSLKIGEEQADGYY
Trigger: ATAATAACCATCGGCCTGTTCTTCTCCAATTTTGAGCGAAACCCACCCGAGAACACCTTCCTTAGACTCACCGCCATGGCAACACACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000567019.2
ENST00000648595.1
CDS-3UTR CAA 90 bp CACATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGGTGGCTTGGGTCCTGTaGATCTTGGAAGGCTGCTCT +
Preference number: 5 (lower is better)
Translates to: HMFGLDCRTRVGRRVVIEVAWVL*ILEGCS
Trigger: AGAGCAGCCTTCCAAGATCAACAGGACCCAAGCCAC...CTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACATGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441366.7
ENST00000648595.1
CDS-3UTR CAA 90 bp ATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGGTGGCTTGGGTCCTGTaGATCTTGGAAGGCTGCTCT +
Preference number: 5 (lower is better)
Translates to: MFGLDCRTRVGRRVVIELVAWVL*ILEGCS
Trigger: AGAGCAGCCTTCCAAGATCAACAGGACCCAAGCCAC...CAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441366.7
ENST00000648595.1
CDS-3UTR CAA 90 bp TTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGGAACACTTCTCTACCTGCTaGTCCTTGCTCAGCAAGCGC +
Preference number: 5 (lower is better)
Translates to: FGLDCRTRVGRRVVIELEHFSTC*SLLSKR
Trigger: GCGCTTGCTGAGCAAGGACAAGCAGGTAGAGAAGTG...TTCCAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR CAA 90 bp CACATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCACTTCTCTACCTGCTaGTCCTTGCTCAGCAAGCGC +
Preference number: 5 (lower is better)
Translates to: HMFGLDCRTRVGRRVVIEHFSTC*SLLSKR
Trigger: GCGCTTGCTGAGCAAGGACAAGCAGGTAGAGAAGTG...CTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACATGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR CAA 90 bp CACATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGTCACTGCCCACACCCTaGGTGCTGATGTTGTTGCCA +
Preference number: 5 (lower is better)
Translates to: HMFGLDCRTRVGRRVVIESLPTP*VLMLLP
Trigger: TGGCAACAACATCAGCACCAAGGGTGTGGGCAGTGA...CTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACATGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR CAA 90 bp TTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGGAATCACTGCCCACACCCTaGGTGCTGATGTTGTTGCCA +
Preference number: 5 (lower is better)
Translates to: FGLDCRTRVGRRVVIELESLPTP*VLMLLP
Trigger: TGGCAACAACATCAGCACCAAGGGTGTGGGCAGTGA...TTCCAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR CAA 90 bp TCACACTGCTACGAAGGGTCTGTTTACTTATCTGACTGCAGTTGGCATCGTGTTGGAGGACGGATGCCGTaGTCTTTCTCACGTTCCATT +
Preference number: 5 (lower is better)
Translates to: SHCYEGSVYLSDCSWHRVGGRMP*SFSRSI
Trigger: AATGGAACGTGAGAAAGACAACGGCATCCGTCCTCC...AACACGATGCCAACTGCAGTCAGATAAGTAAACAGACCCTTCGTAGCAGTGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565459.1
CDS-3UTR CAA 90 bp TTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGGAATTCTTCCTCCAGAGCTaGGCAGCAAGGACACCGTTG +
Preference number: 5 (lower is better)
Translates to: FGLDCRTRVGRRVVIELEFFLQS*AARTPL
Trigger: CAACGGTGTCCTTGCTGCCAAGCTCTGGAGGAAGAA...TTCCAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR CAA 90 bp ATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGTTCTTCCTCCAGAGCTaGGCAGCAAGGACACCGTTG +
Preference number: 5 (lower is better)
Translates to: MFGLDCRTRVGRRVVIELFFLQS*AARTPL
Trigger: CAACGGTGTCCTTGCTGCCAAGCTCTGGAGGAAGAA...CAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR CAA 90 bp GCAAACACTTCTCACACTGCTACGAAGGGTCTGTTTACTTATCTGACTGCAGTTTTCTTCCTCCAGAGCTaGGCAGCAAGGACACCGTTG +
Preference number: 5 (lower is better)
Translates to: ANTSHTATKGLFTYLTAVFFLQS*AARTPL
Trigger: CAACGGTGTCCTTGCTGCCAAGCTCTGGAGGAAGAA...AACTGCAGTCAGATAAGTAAACAGACCCTTCGTAGCAGTGTGAGAAGTGTTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565459.1
CDS-3UTR CAA 90 bp ATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGCACAGCATCCTCAGTTaGTGCAGTGAGGGCCACCTT +
Preference number: 5 (lower is better)
Translates to: MFGLDCRTRVGRRVVIELHSILS*CSEGHL
Trigger: AAGGTGGCCCTCACTGCACAAACTGAGGATGCTGTG...CAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540029.5
CDS-3UTR CAA 90 bp ATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGAGGACCCTCTGCTCCTaGAGAAAATGCAGCAAGGCA +
Preference number: 5 (lower is better)
Translates to: MFGLDCRTRVGRRVVIELRTLCS*RKCSKA
Trigger: TGCCTTGCTGCATTTTCTCAAGGAGCAGAGGGTCCT...CAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR CAA 90 bp TTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGGAAAGGACCCTCTGCTCCTaGAGAAAATGCAGCAAGGCA +
Preference number: 5 (lower is better)
Translates to: FGLDCRTRVGRRVVIELERTLCS*RKCSKA
Trigger: TGCCTTGCTGCATTTTCTCAAGGAGCAGAGGGTCCT...TTCCAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR CAA 90 bp TTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGGAAGGAGGACGGATGCCGTaGTCTTTCTCACGTTCCATT +
Preference number: 5 (lower is better)
Translates to: FGLDCRTRVGRRVVIELEGGRMP*SFSRSI
Trigger: AATGGAACGTGAGAAAGACAACGGCATCCGTCCTCC...TTCCAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR CAA 90 bp ATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGGGAGGACGGATGCCGTaGTCTTTCTCACGTTCCATT +
Preference number: 5 (lower is better)
Translates to: MFGLDCRTRVGRRVVIELGGRMP*SFSRSI
Trigger: AATGGAACGTGAGAAAGACAACGGCATCCGTCCTCC...CAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR CAA 90 bp CACATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGGCTCCTCATTGTTTCTaGCTGCCTGAAAGTCACAGC +
Preference number: 5 (lower is better)
Translates to: HMFGLDCRTRVGRRVVIEAPHCF*LPESHS
Trigger: GCTGTGACTTTCAGGCAGCAAGAAACAATGAGGAGC...CTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACATGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR CAA 90 bp TTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGGAAGGGTTTCGCTCAAAATaGGAGAAGAACAGGCCGATG +
Preference number: 5 (lower is better)
Translates to: FGLDCRTRVGRRVVIELEGFRSK*EKNRPM
Trigger: CATCGGCCTGTTCTTCTCCAATTTTGAGCGAAACCC...TTCCAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR CAA 90 bp ATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGGGGTTTCGCTCAAAATaGGAGAAGAACAGGCCGATG +
Preference number: 5 (lower is better)
Translates to: MFGLDCRTRVGRRVVIELGFRSK*EKNRPM
Trigger: CATCGGCCTGTTCTTCTCCAATTTTGAGCGAAACCC...CAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR CAA 90 bp CACATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGGCTTTCTCTGGCATCTaGATGGCAAGGTGTGGTCTA +
Preference number: 5 (lower is better)
Translates to: HMFGLDCRTRVGRRVVIEAFSGI*MARCGL
Trigger: TAGACCACACCTTGCCATCAAGATGCCAGAGAAAGC...CTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACATGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR CAA 90 bp ATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGGCTTTCTCTGGCATCTaGATGGCAAGGTGTGGTCTA +
Preference number: 5 (lower is better)
Translates to: MFGLDCRTRVGRRVVIELAFSGI*MARCGL
Trigger: TAGACCACACCTTGCCATCAAGATGCCAGAGAAAGC...CAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR CAA 90 bp CACATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGGGCGTGAACTGGAACTaGGCACACATGGTGTTTTCA +
Preference number: 5 (lower is better)
Translates to: HMFGLDCRTRVGRRVVIEGVNWN*AHMVFS
Trigger: TGAAAACACCATGTGTGCCAAGTTCCAGTTCACGCC...CTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR CAA 90 bp CACATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGAATTGGGAATGTGGCTaGGGTCCTGTTGATCTTGGA +
Preference number: 5 (lower is better)
Translates to: HMFGLDCRTRVGRRVVIENWECG*GPVDLG
Trigger: TCCAAGATCAACAGGACCCAAGCCACATTCCCAATT...CTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACATGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441366.7
ENST00000648595.1
CDS-3UTR CAA 90 bp ATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGCCAACATACTTTGTGTaGGAGTCAGTCAACTCCAGT +
Preference number: 5 (lower is better)
Translates to: MFGLDCRTRVGRRVVIELPTYFV*ESVNSS
Trigger: ACTGGAGTTGACTGACTCCAACACAAAGTATGTTGG...CAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR CAA 90 bp CACATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCCAACATACTTTGTGTaGGAGTCAGTCAACTCCAGT +
Preference number: 5 (lower is better)
Translates to: HMFGLDCRTRVGRRVVIEPTYFV*ESVNSS
Trigger: ACTGGAGTTGACTGACTCCAACACAAAGTATGTTGG...CTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACATGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR CAA 90 bp ATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGTGTTGCCAACATACTTaGTGTTGGAGTCAGTCAACT +
Preference number: 5 (lower is better)
Translates to: MFGLDCRTRVGRRVVIELCCQHT*CWSQST
Trigger: AGTTGACTGACTCCAACACAAAGTATGTTGGCAACA...CAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR CAA 90 bp CACATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGTGTTGCCAACATACTTaGTGTTGGAGTCAGTCAACT +
Preference number: 5 (lower is better)
Translates to: HMFGLDCRTRVGRRVVIECCQHT*CWSQST
Trigger: AGTTGACTGACTCCAACACAAAGTATGTTGGCAACA...CTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACATGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR CAA 90 bp ATGTTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGTTGGTGCTGATGTTGTaGCCAACATACTTTGTGTTG +
Preference number: 5 (lower is better)
Translates to: MFGLDCRTRVGRRVVIELLVLML*PTYFVL
Trigger: CAACACAAAGTATGTTGGCAACAACATCAGCACCAA...CAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS-3UTR CAA 90 bp TTTGGTTTAGATTGTAGAACAAGGGTTGGCAGGAGAGTGGTGATAGAGCTGGAATTGGTGCTGATGTTGTaGCCAACATACTTTGTGTTG +
Preference number: 5 (lower is better)
Translates to: FGLDCRTRVGRRVVIELELVLML*PTYFVL
Trigger: CAACACAAAGTATGTTGGCAACAACATCAGCACCAA...TTCCAGCTCTATCACCACTCTCCTGCCAACCCTTGTTCTACAATCTAAACCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS TCA 72 bp AGGCCTGGCCATCATACACAGGTCGGCCTCGGCCGGTaGGCCACTGCCGCAGGATGGGCACGCTGCCCCGGC +
Preference number: 6 (lower is better)
Translates to: RPGHHTQVGLGR*ATAAGWARCPG
Trigger: GCCGGGGCAGCGTGCCCATCCTGCGGCAGTGGCTCACCGGCCGAGGCCGACCTGTGTATGATGGCCAGGCCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000567019.2
ENST00000569204.1
ENST00000648595.1
CDS GCA 72 bp CCATCATACACAGGTCGGCCTCGGCCGGTGAGCCACTaGCGCAGGATGGGCACGCTGCCCCGGCGCTTGTTC +
Preference number: 6 (lower is better)
Translates to: PSYTGRPRPVSH*RRMGTLPRRLF
Trigger: GAACAAGCGCCGGGGCAGCGTGCCCATCCTGCGGCAGTGGCTCACCGGCCGAGGCCGACCTGTGTATGATGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000567019.2
ENST00000569204.1
ENST00000648595.1
CDS CCA 72 bp CGGCGCTTGTTCAGCAAGGCCCCTTCCTGGGTGGCCTaGGTCTGCGGGGTGGGCAGGACCCTCTGCTCCTTG +
Preference number: 6 (lower is better)
Translates to: RRLFSKAPSWVA*VCGVGRTLCSL
Trigger: CAAGGAGCAGAGGGTCCTGCCCACCCCGCAGACCCAGGCCACCCAGGAAGGGGCCTTGCTGAACAAGCGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000567019.2
ENST00000569204.1
ENST00000648595.1
CDS CCA 72 bp GAAGACGCCCACCGGTGCCCTGTGCTGAGGCAAACGTaGTCACCACGCGGGCAGGGATTCCCAGGCATCGCA +
Preference number: 6 (lower is better)
Translates to: EDAHRCPVLRQT*SPRGQGFPGIA
Trigger: TGCGATGCCTGGGAATCCCTGCCCGCGTGGTGACCACGTTTGCCTCAGCACAGGGCACCGGTGGGCGTCTTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000567019.2
ENST00000569204.1
ENST00000648595.1
CDS CCA 72 bp GGGGCTGCATACAGTCCAGCAAGCCCTGTCGAGCGCTaGCTTGGCTCACCCTGTCCCATGGTTGCAGGCCGC +
Preference number: 6 (lower is better)
Translates to: GAAYSPASPVER*LGSPCPMVAGR
Trigger: GCGGCCTGCAACCATGGGACAGGGTGAGCCAAGCCAGCGCTCGACAGGGCTTGCTGGACTGTATGCAGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648595.1
CDS CCA 72 bp GCCCTGTCGAGCGCTGGCTTGGCTCACCCTGTCCCATaGTTGCAGGCCGCTCCTCTTATCCACTTGGCCGCA +
Preference number: 6 (lower is better)
Translates to: ALSSAGLAHPVP*LQAAPLIHLAA
Trigger: TGCGGCCAAGTGGATAAGAGGAGCGGCCTGCAACCATGGGACAGGGTGAGCCAAGCCAGCGCTCGACAGGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648595.1
CDS CAA 90 bp CTGCGGGGGCTGCATACAGTCCAGCAAGCCCTGTCGAGCGCTGGCTaGGCTCACCCTGTCCCATGGTTGCAGGCCGCTCCTCTTATCCAC +
Preference number: 6 (lower is better)
Translates to: LRGLHTVQQALSSAG*AHPVPWLQAAPLIH
Trigger: GTGGATAAGAGGAGCGGCCTGCAACCATGGGACAGGGTGAGCCAAGCCAGCGCTCGACAGGGCTTGCTGGACTGTATGCAGCCCCCGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648595.1
CDS TCA 72 bp CCTGGGTCTGCGGGGTGGGCAGGACCCTCTGCTCCTTaGGAAAATGCAGCAAGGCACCCAACACACGGGCCA +
Preference number: 6 (lower is better)
Translates to: PGSAGWAGPSAP*ENAARHPTHGP
Trigger: TGGCCCGTGTGTTGGGTGCCTTGCTGCATTTTCTCAAGGAGCAGAGGGTCCTGCCCACCCCGCAGACCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS GCA 72 bp CGGGCCACGTGCACCGGCTGGCTCCACTTCTCTACCTaGTTGTCCTTGCTCAGCAAGCGCAGGCTGAGGTCA +
Preference number: 6 (lower is better)
Translates to: RATCTGWLHFST*LSLLSKRRLRS
Trigger: TGACCTCAGCCTGCGCTTGCTGAGCAAGGACAAGCAGGTAGAGAAGTGGAGCCAGCCGGTGCACGTGGCCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS CCA 72 bp AGCACTGTGCAAGCAACAGCAGCCAACACCCAGGCCTaGCCATCATACACAGGTCGGCCTCGGCCGGTGAGC +
Preference number: 6 (lower is better)
Translates to: STVQATAANTQA*PSYTGRPRPVS
Trigger: GCTCACCGGCCGAGGCCGACCTGTGTATGATGGCCAGGCCTGGGTGTTGGCTGCTGTTGCTTGCACAGTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000567019.2
ENST00000569204.1
ENST00000648595.1
CDS CCA 72 bp TGCATACAGTCCAGCAAGCCCTGTCGAGCGCTGGCTTaGCTCACCCTGTCCCATGGTTGCAGGCCGCTCCTC +
Preference number: 6 (lower is better)
Translates to: CIQSSKPCRALA*LTLSHGCRPLL
Trigger: GAGGAGCGGCCTGCAACCATGGGACAGGGTGAGCCAAGCCAGCGCTCGACAGGGCTTGCTGGACTGTATGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648595.1
CDS CAA 72 bp CTGCATACAGTCCAGCAAGCCCTGTCGAGCGCTGGCTaGGCTCACCCTGTCCCATGGTTGCAGGCCGCTCCT +
Preference number: 6 (lower is better)
Translates to: LHTVQQALSSAG*AHPVPWLQAAP
Trigger: AGGAGCGGCCTGCAACCATGGGACAGGGTGAGCCAAGCCAGCGCTCGACAGGGCTTGCTGGACTGTATGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648595.1
CDS CAA 90 bp CAGCAAGCCCTGTCGAGCGCTGGCTTGGCTCACCCTGTCCCATGGTaGCAGGCCGCTCCTCTTATCCACTTGGCCGCAGAAAGCGCCTCT +
Preference number: 6 (lower is better)
Translates to: QQALSSAGLAHPVPW*QAAPLIHLAAESAS
Trigger: AGAGGCGCTTTCTGCGGCCAAGTGGATAAGAGGAGCGGCCTGCAACCATGGGACAGGGTGAGCCAAGCCAGCGCTCGACAGGGCTTGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648595.1
CDS TCA 72 bp AGGGCTGCCCCCTCCTCACAAAGAGGCGCCGGGAGCTaGGGGCCTTGGTGTGGTGCTCCTCATTGTTTCTTG +
Preference number: 6 (lower is better)
Translates to: RAAPSSQRGAGS*GPWCGAPHCFL
Trigger: CAAGAAACAATGAGGAGCACCACACCAAGGCCCTCAGCTCCCGGCGCCTCTTTGTGAGGAGGGGGCAGCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS TCA 72 bp CCTGGGTCTGCGGGGTGGGCAGGACCCTCTGCTCCTTaGGAAAATGCAGCTGGCCAAAGTCCCAGGACTCTG +
Preference number: 6 (lower is better)
Translates to: PGSAGWAGPSAP*ENAAGQSPRTL
Trigger: CAGAGTCCTGGGACTTTGGCCAGCTGCATTTTCTCAAGGAGCAGAGGGTCCTGCCCACCCCGCAGACCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569204.1
CDS CAA 72 bp CTGTCGAGCGCTGGCTTGGCTCACCCTGTCCCATGGTaGCAGGCCGCTCCTCTTATCCACTTGGCCGCAGAA +
Preference number: 6 (lower is better)
Translates to: LSSAGLAHPVPW*QAAPLIHLAAE
Trigger: TTCTGCGGCCAAGTGGATAAGAGGAGCGGCCTGCAACCATGGGACAGGGTGAGCCAAGCCAGCGCTCGACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648595.1
CDS CAA 90 bp AACACACGGGCCACGTGCACCGGCTGGCTCCACTTCTCTACCTGCTaGTCCTTGCTCAGCAAGCGCAGGCTGAGGTCAATGACATCCCCC +
Preference number: 6 (lower is better)
Translates to: NTRATCTGWLHFSTC*SLLSKRRLRSMTSP
Trigger: GGGGGATGTCATTGACCTCAGCCTGCGCTTGCTGAGCAAGGACAAGCAGGTAGAGAAGTGGAGCCAGCCGGTGCACGTGGCCCGTGTGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS TCA 72 bp TTCATCTATGAGAAGACGCCCACCGGTGCCCTGTGCTaGGGCAAACGTGGTCACCACGCGGGCAGGGATTCC +
Preference number: 6 (lower is better)
Translates to: FIYEKTPTGALC*GKRGHHAGRDS
Trigger: GGAATCCCTGCCCGCGTGGTGACCACGTTTGCCTCAGCACAGGGCACCGGTGGGCGTCTTCTCATAGATGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000567019.2
ENST00000569204.1
ENST00000648595.1
CDS GCA 72 bp TGTCGAGCGCTGGCTTGGCTCACCCTGTCCCATGGTTaGAGGCCGCTCCTCTTATCCACTTGGCCGCAGAAA +
Preference number: 6 (lower is better)
Translates to: CRALAWLTLSHG*RPLLLSTWPQK
Trigger: TTTCTGCGGCCAAGTGGATAAGAGGAGCGGCCTGCAACCATGGGACAGGGTGAGCCAAGCCAGCGCTCGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648595.1
CDS CAA 72 bp GGGGGTGTCTGGTGGGGCCATAGAGCATTACCCAGGTaGGCACTGAGCGTGAGGTGCAGCTTCTTCCTCCAG +
Preference number: 6 (lower is better)
Translates to: GGVWWGHRALPR*ALSVRCSFFLQ
Trigger: CTGGAGGAAGAAGCTGCACCTCACGCTCAGTGCCAACCTGGGTAATGCTCTATGGCCCCACCAGACACCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000565459.1
CDS CAA 90 bp TACCCAGGGCCTGTCCCATGGTTGCAGGCCGCTCCTCTTATCCACTaGGCCGCAGAAAGCGCCTCTCTCAAACTGTTGCTTCTGGGCTCC +
Preference number: 6 (lower is better)
Translates to: YPGPVPWLQAAPLIH*AAESASLKLLLLGS
Trigger: GGAGCCCAGAAGCAACAGTTTGAGAGAGGCGCTTTCTGCGGCCAAGTGGATAAGAGGAGCGGCCTGCAACCATGGGACAGGCCCTGGGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441366.7
ENST00000540029.5
CDS CCA 72 bp GGCCACCTTCTTCAGGGCAGGCAGAAATGCACGGACTaGAGCGCGGAAGTACAGGATGATGGTGAAGGGCTG +
Preference number: 6 (lower is better)
Translates to: GHLLQGRQKCTD*SAEVQDDGEGL
Trigger: CAGCCCTTCACCATCATCCTGTACTTCCGCGCTCCAGTCCGTGCATTTCTGCCTGCCCTGAAGAAGGTGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS CAA 90 bp TTGGCTCACCCTGTCCCATGGTTGCAGGCCGCTCCTCTTATCCACTaGGCCGCAGAAAGCGCCTCTCTCAAACTGTTGCTTCTGGGCTCC +
Preference number: 6 (lower is better)
Translates to: LAHPVPWLQAAPLIH*AAESASLKLLLLGS
Trigger: GGAGCCCAGAAGCAACAGTTTGAGAGAGGCGCTTTCTGCGGCCAAGTGGATAAGAGGAGCGGCCTGCAACCATGGGACAGGGTGAGCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648595.1
CDS GCA 72 bp GTCACAGCTCTTGATACCCAGGGCCTGTCCCATGGTTaGAGGCCGCTCCTCTTATCCACTTGGCCGCAGAAA +
Preference number: 6 (lower is better)
Translates to: VTALDTQGLSHG*RPLLLSTWPQK
Trigger: TTTCTGCGGCCAAGTGGATAAGAGGAGCGGCCTGCAACCATGGGACAGGCCCTGGGTATCAAGAGCTGTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441366.7
ENST00000540029.5
CDS GCA 72 bp TGCAGTGAGGGCCACCTTCTTCAGGGCAGGCAGAAATaGACGGACTGGAGCGCGGAAGTACAGGATGATGGT +
Preference number: 6 (lower is better)
Translates to: CSEGHLLQGRQK*TDWSAEVQDDG
Trigger: ACCATCATCCTGTACTTCCGCGCTCCAGTCCGTGCATTTCTGCCTGCCCTGAAGAAGGTGGCCCTCACTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS CCA 72 bp CTGTCCCATGGTTGCAGGCCGCTCCTCTTATCCACTTaGCCGCAGAAAGCGCCTCTCTCAAACTGTTGCTTC +
Preference number: 6 (lower is better)
Translates to: LSHGCRPLLLST*PQKAPLSNCCF
Trigger: GAAGCAACAGTTTGAGAGAGGCGCTTTCTGCGGCCAAGTGGATAAGAGGAGCGGCCTGCAACCATGGGACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS CCA 72 bp ACAGGACCCCAGGACTCCACCTCCATTAGGAGCACTTaGGTGCAGAATCTGCCATCCATCATAACCCTGGGG +
Preference number: 6 (lower is better)
Translates to: TGPQDSTSIRST*VQNLPSIITLG
Trigger: CCCCAGGGTTATGATGGATGGCAGATTCTGCACCCAAGTGCTCCTAATGGAGGTGGAGTCCTGGGGTCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000567019.2
ENST00000648595.1
CDS CAA 72 bp CCTGTCCCATGGTTGCAGGCCGCTCCTCTTATCCACTaGGCCGCAGAAAGCGCCTCTCTCAAACTGTTGCTT +
Preference number: 6 (lower is better)
Translates to: PVPWLQAAPLIH*AAESASLKLLL
Trigger: AAGCAACAGTTTGAGAGAGGCGCTTTCTGCGGCCAAGTGGATAAGAGGAGCGGCCTGCAACCATGGGACAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS CAA 90 bp TTTCGGTCCCCCAGACTGGAAATTGGGAATGTGGCTTGGGTCCTGTaGATCTTGGAAGGCTGCTCTCCAGTTTGTGCAGTGAGGGCCACC +
Preference number: 6 (lower is better)
Translates to: FRSPRLEIGNVAWVL*ILEGCSPVCAVRAT
Trigger: GGTGGCCCTCACTGCACAAACTGGAGAGCAGCCTTCCAAGATCAACAGGACCCAAGCCACATTCCCAATTTCCAGTCTGGGGGACCGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441366.7
ENST00000648595.1
CDS TCA 72 bp GCCTTGGTGTGGTGCTCCTCATTGTTTCTTGCTGCCTaGAAGTCACAGCTCTTGATACCCAGGGCCTGTCCC +
Preference number: 6 (lower is better)
Translates to: ALVWCSSLFLAA*KSQLLIPRACP
Trigger: GGGACAGGCCCTGGGTATCAAGAGCTGTGACTTTCAGGCAGCAAGAAACAATGAGGAGCACCACACCAAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441366.7
ENST00000540029.5
CDS TCA 72 bp CAGTGTGAACTGACCCAAGAGGAGTTGCTTCCTGCCTaGGACCTGCAGCAGAAGCGAGTAGTGGCCAATGAC +
Preference number: 6 (lower is better)
Translates to: QCELTQEELLPA*DLQQKRVVAND
Trigger: GTCATTGGCCACTACTCGCTTCTGCTGCAGGTCTCAGGCAGGAAGCAACTCCTCTTGGGTCAGTTCACACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000569204.1
ENST00000648595.1
CDS TCA 72 bp CAGGGCATCCATCCCACTTCCTTTAATGAAAACAGGTaGTGCTGCGGGGGCTGCATACAGTCCAGCAAGCCC +
Preference number: 6 (lower is better)
Translates to: QGIHPTSFNENR*CCGGCIQSSKP
Trigger: GGGCTTGCTGGACTGTATGCAGCCCCCGCAGCATCACCTGTTTTCATTAAAGGAAGTGGGATGGATGCCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000648595.1
CDS GCA 72 bp TCCACTTGGCCGCAGAAAGCGCCTCTCTCAAACTGTTaGTTCTGGGCTCCTTCTGGGCTTTCTGTCTTCCAG +
Preference number: 6 (lower is better)
Translates to: STWPQKAPLSNC*FWAPSGLSVFQ
Trigger: CTGGAAGACAGAAAGCCCAGAAGGAGCCCAGAAGCAACAGTTTGAGAGAGGCGCTTTCTGCGGCCAAGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS GCA 72 bp GCTGAGGGCCTTGGTGTGGTGCTCCTCATTGTTTCTTaGTGCCTGAAAGTCACAGCTCTTGATACCCAGGGC +
Preference number: 6 (lower is better)
Translates to: AEGLGVVLLIVS*CLKVTALDTQG
Trigger: GCCCTGGGTATCAAGAGCTGTGACTTTCAGGCAGCAAGAAACAATGAGGAGCACCACACCAAGGCCCTCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000648595.1
CDS CCA 72 bp TCAAGAGCAGGTACAGAGGACTGGCAGTCTCGAGACTaGGAGGACGGATGCCGTTGTCTTTCTCACGTTCCA +
Preference number: 6 (lower is better)
Translates to: SRAGTEDWQSRD*EDGCRCLSHVP
Trigger: TGGAACGTGAGAAAGACAACGGCATCCGTCCTCCCAGTCTCGAGACTGCCAGTCCTCTGTACCTGCTCTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000565459.1
ENST00000567019.2
ENST00000648595.1
CDS CAA 72 bp CTCTGGAGCCCCACATGTGTTGGCGTGAACTGGAACTaGGCACACATGGTGTTTTCAGGCCACACTGAACGG +
Preference number: 6 (lower is better)
Translates to: LWSPTCVGVNWN*AHMVFSGHTER
Trigger: CCGTTCAGTGTGGCCTGAAAACACCATGTGTGCCAAGTTCCAGTTCACGCCAACACATGTGGGGCTCCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000567019.2
ENST00000648595.1
CDS GCA 72 bp AAGGACACCGTTGTAGTGTACAGCCTGGACCCCAATTaGCAGCTGCACTGCCTTCTCCTGCTCACTGTGATT +
Preference number: 6 (lower is better)
Translates to: KDTVVVYSLDPN*QLHCLLLLTVI
Trigger: AATCACAGTGAGCAGGAGAAGGCAGTGCAGCTGGCAATTGGGGTCCAGGCTGTACACTACAACGGTGTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000565459.1
ENST00000567019.2
ENST00000648595.1
CDS CCA 72 bp TGCACTCCACCACTTTCGGTCCCCCAGACTGGAAATTaGGAATGTGGCTTGGGTCCTGTTGATCTTGGAAGG +
Preference number: 6 (lower is better)
Translates to: CTPPLSVPQTGN*ECGLGPVDLGR
Trigger: CCTTCCAAGATCAACAGGACCCAAGCCACATTCCCAATTTCCAGTCTGGGGGACCGAAAGTGGTGGAGTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441366.7
ENST00000648595.1
CDS CCA 72 bp GTGAGTCTCTGGAGCCCCACATGTGTTGGCGTGAACTaGAACTTGGCACACATGGTGTTTTCAGGCCACACT +
Preference number: 6 (lower is better)
Translates to: VSLWSPTCVGVN*NLAHMVFSGHT
Trigger: AGTGTGGCCTGAAAACACCATGTGTGCCAAGTTCCAGTTCACGCCAACACATGTGGGGCTCCAGAGACTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000567019.2
ENST00000648595.1
CDS CAA 72 bp CTGGAAATTGGGAATGTGGCTTGGGTCCTGTTGATCTaGGAAGGCTGCTCTCCAGTTTGTGCAGTGAGGGCC +
Preference number: 6 (lower is better)
Translates to: LEIGNVAWVLLI*EGCSPVCAVRA
Trigger: GGCCCTCACTGCACAAACTGGAGAGCAGCCTTCCAAGATCAACAGGACCCAAGCCACATTCCCAATTTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441366.7
ENST00000648595.1
CDS CAA 90 bp ACTCCACCACTTTCGGTCCCCCAGACTGGAAATTGGGAATGTGGCTaGGGTCCTGTTGATCTTGGAAGGCTGCTCTCCAGTTTGTGCAGT +
Preference number: 6 (lower is better)
Translates to: TPPLSVPQTGNWECG*GPVDLGRLLSSLCS
Trigger: ACTGCACAAACTGGAGAGCAGCCTTCCAAGATCAACAGGACCCAAGCCACATTCCCAATTTCCAGTCTGGGGGACCGAAAGTGGTGGAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441366.7
ENST00000648595.1
CDS CAA 90 bp AGGTACAGAGGACTGGCAGTCTCGAGACTGGGAGGACGGATGCCGTaGTCTTTCTCACGTTCCATTTTCTCTTTCTCGACTCTCTCCAGC +
Preference number: 6 (lower is better)
Translates to: RYRGLAVSRLGGRMP*SFSRSIFSFSTLSS
Trigger: GCTGGAGAGAGTCGAGAAAGAGAAAATGGAACGTGAGAAAGACAACGGCATCCGTCCTCCCAGTCTCGAGACTGCCAGTCCTCTGTACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000565459.1
ENST00000567019.2
ENST00000648595.1
CDS TCA 72 bp GCCTTGGTGTGGTGCTCCTCATTGTTTCTTGCTGCCTaGAAGTCACAGCTCTTGATACCCAGGGCATCCATC +
Preference number: 6 (lower is better)
Translates to: ALVWCSSLFLAA*KSQLLIPRASI
Trigger: GATGGATGCCCTGGGTATCAAGAGCTGTGACTTTCAGGCAGCAAGAAACAATGAGGAGCACCACACCAAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648595.1
CDS GCA 72 bp CTGAGCAAAGCAGCTAAGGTTGGATTCAGAGTGTGTTaGCATGGCGGTGAGTCTAAGGAAGGTGTTCTCGGG +
Preference number: 6 (lower is better)
Translates to: LSKAAKVGFRVC*HGGESKEGVLG
Trigger: CCCGAGAACACCTTCCTTAGACTCACCGCCATGGCAACACACTCTGAATCCAACCTTAGCTGCTTTGCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000567019.2
ENST00000648595.1
CDS CCA 72 bp TTTCGGTCCCCCAGACTGGAAATTGGGAATGTGGCTTaGGTCCTGTTGATCTTGGAAGGCTGCTCTCCAGTT +
Preference number: 6 (lower is better)
Translates to: FRSPRLEIGNVA*VLLILEGCSPV
Trigger: AACTGGAGAGCAGCCTTCCAAGATCAACAGGACCCAAGCCACATTCCCAATTTCCAGTCTGGGGGACCGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441366.7
ENST00000648595.1
CDS CCA 72 bp CACTTCCACAGTGAGTCTCTGGAGCCCCACATGTGTTaGCGTGAACTGGAACTTGGCACACATGGTGTTTTC +
Preference number: 6 (lower is better)
Translates to: HFHSESLEPHMC*RELELGTHGVF
Trigger: GAAAACACCATGTGTGCCAAGTTCCAGTTCACGCCAACACATGTGGGGCTCCAGAGACTCACTGTGGAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000567019.2
ENST00000648595.1
CDS CCA 72 bp TGGAACATGTTGCAGTCCACTTCCACAGTGAGTCTCTaGAGCCCCACATGTGTTGGCGTGAACTGGAACTTG +
Preference number: 6 (lower is better)
Translates to: WNMLQSTSTVSL*SPTCVGVNWNL
Trigger: CAAGTTCCAGTTCACGCCAACACATGTGGGGCTCCAGAGACTCACTGTGGAAGTGGACTGCAACATGTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000567019.2
ENST00000648595.1
CDS TCA 72 bp TCCTCTCTATTCCAGGGGTTAAAAAGCAGTGTGAACTaGCCCAAGAGGAGTTGCTTCCTGCCTGAGACCTGC +
Preference number: 6 (lower is better)
Translates to: SSLFQGLKSSVN*PKRSCFLPETC
Trigger: GCAGGTCTCAGGCAGGAAGCAACTCCTCTTGGGTCAGTTCACACTGCTTTTTAACCCCTGGAATAGAGAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000569204.1
ENST00000648595.1
CDS TCA 72 bp CGTTCTGAAGTCCCTCCTCATTATAGTATTCATCTATaGGAAGACGCCCACCGGTGCCCTGTGCTGAGGCAA +
Preference number: 6 (lower is better)
Translates to: RSEVPPHYSIHL*EDAHRCPVLRQ
Trigger: TTGCCTCAGCACAGGGCACCGGTGGGCGTCTTCTCATAGATGAATACTATAATGAGGAGGGACTTCAGAACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000567019.2
ENST00000569204.1
ENST00000648595.1
CDS GCA 72 bp ACAGAGGACTGGCAGTCTCGAGACTGGGAGGACGGATaGCGTTGTCTTTCTCACGTTCCATTTTCTCTTTCT +
Preference number: 6 (lower is better)
Translates to: TEDWQSRDWEDG*RCLSHVPFSLS
Trigger: AGAAAGAGAAAATGGAACGTGAGAAAGACAACGGCATCCGTCCTCCCAGTCTCGAGACTGCCAGTCCTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000565459.1
ENST00000567019.2
ENST00000648595.1
CDS GCA 72 bp GTTATTATCTTTTCCAGGTTGGCACTGAGCGTGAGGTaGAGCTTCTTCCTCCAGAGCTTGGCAGCAAGGACA +
Preference number: 6 (lower is better)
Translates to: VIIFSRLALSVR*SFFLQSLAART
Trigger: TGTCCTTGCTGCCAAGCTCTGGAGGAAGAAGCTGCACCTCACGCTCAGTGCCAACCTGGAAAAGATAATAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000567019.2
ENST00000648595.1
CDS CAA 72 bp CCCTTGGTGCTGATGTTGTTGCCAACATACTTTGTGTaGGAGTCAGTCAACTCCAGTGTCCCATCCTCACAG +
Preference number: 6 (lower is better)
Translates to: PLVLMLLPTYFV*ESVNSSVPSSQ
Trigger: CTGTGAGGATGGGACACTGGAGTTGACTGACTCCAACACAAAGTATGTTGGCAACAACATCAGCACCAAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000567019.2
ENST00000648595.1
CDS TCA 72 bp ATGAGACCATTCTGGTTCAACAAGTACTCCATGCGCTaGGCCTCATTCTTCAGGAACACAGCATCCTCTCTA +
Preference number: 6 (lower is better)
Translates to: MRPFWFNKYSMR*ASFFRNTASSL
Trigger: TAGAGAGGATGCTGTGTTCCTGAAGAATGAGGCTCAGCGCATGGAGTACTTGTTGAACCAGAATGGTCTCAT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000441366.7
ENST00000569204.1
ENST00000648595.1
CDS TCA 72 bp ATGAGACCATTCTGGTTCAACAAGTACTCCATGCGCTaGGCCTCATTCTTCAGGAACACAGCATCCTCAGTT +
Preference number: 6 (lower is better)
Translates to: MRPFWFNKYSMR*ASFFRNTASSV
Trigger: AACTGAGGATGCTGTGTTCCTGAAGAATGAGGCTCAGCGCATGGAGTACTTGTTGAACCAGAATGGTCTCAT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000540029.5
CDS TCA 72 bp TGGAAGTTTAAGCTGATAGTTCAGGGGCTACCACGGTaGCGCTTTTATAGTTGGTTAGGTTCTGGAACATGT +
Preference number: 6 (lower is better)
Translates to: WKFKLIVQGLPR*RFYSWLGSGTC
Trigger: ACATGTTCCAGAACCTAACCAACTATAAAAGCGTCACCGTGGTAGCCCCTGAACTATCAGCTTAAACTTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000441366.7
ENST00000540029.5
ENST00000567019.2
ENST00000648595.1