Pregenerated sensors for EPB41L4A-DT (Homo sapiens)
Ensembl gene IDs: ENSG00000278921Ensembl transcript IDs: ENST00000623705.1, ENST00000624967.2
Found 45 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GCTGGACTGCCCCGCGGCTTGGGCGCAGTGTGCGGCTTGGCAGCGTaGACTCGCCGGCACCTCGCCGCTGGGACCACGGTCTCTGCCCCG | + |
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Preference number: 5 (lower is better) Translates to: AGLPRGLGAVCGLAA*TRRHLAAGTTVSAP Trigger: CGGGGCAGAGACCGTGGTCCCAGCGGCGAGGTGCCGGCGAGTCCACGCTGCCAAGCCGCACACTGCGCCCAAGCCGCGGGGCAGTCCAGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000623705.1 ENST00000624967.2 |
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| CDS CCA 90 bp | CGCGGCCGACCGCGCGGAGGGCGTGGGATTGGGACCGCCGAACCGTaGGGTCCGAGCAGCACCGCGTCCTCTTCTCCCCACCCAGCCTCC | + |
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Preference number: 5 (lower is better) Translates to: RGRPRGGRGIGTAEP*GPSSTASSSPHPAS Trigger: GGAGGCTGGGTGGGGAGAAGAGGACGCGGTGCTGCTCGGACCCCACGGTTCGGCGGTCCCAATCCCACGCCCTCCGCGCGGTCGGCCGCG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000623705.1 ENST00000624967.2 |
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| CDS GCA 90 bp | AAGGACGCAGCGAGCGCTGGACTGCCCCGCGGCTTGGGCGCAGTGTaGGGCTTGGCAGCGTGGACTCGCCGGCACCTCGCCGCTGGGACC | + |
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Preference number: 5 (lower is better) Translates to: KDAASAGLPRGLGAV*GLAAWTRRHLAAGT Trigger: GGTCCCAGCGGCGAGGTGCCGGCGAGTCCACGCTGCCAAGCCGCACACTGCGCCCAAGCCGCGGGGCAGTCCAGCGCTCGCTGCGTCCTT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000623705.1 ENST00000624967.2 |
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| CDS CCA 90 bp | CGCAGTGTGCGGCTTGGCAGCGTGGACTCGCCGGCACCTCGCCGCTaGGACCACGGTCTCTGCCCCGCCCTCCGCCCCCAGCTGATACCC | + |
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Preference number: 5 (lower is better) Translates to: RSVRLGSVDSPAPRR*DHGLCPALRPQLIP Trigger: GGGTATCAGCTGGGGGCGGAGGGCGGGGCAGAGACCGTGGTCCCAGCGGCGAGGTGCCGGCGAGTCCACGCTGCCAAGCCGCACACTGCG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000623705.1 ENST00000624967.2 |
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| CDS CCA 90 bp | CAGCGAGCGCTGGACTGCCCCGCGGCTTGGGCGCAGTGTGCGGCTTaGCAGCGTGGACTCGCCGGCACCTCGCCGCTGGGACCACGGTCT | + |
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Preference number: 5 (lower is better) Translates to: QRALDCPAAWAQCAA*QRGLAGTSPLGPRS Trigger: AGACCGTGGTCCCAGCGGCGAGGTGCCGGCGAGTCCACGCTGCCAAGCCGCACACTGCGCCCAAGCCGCGGGGCAGTCCAGCGCTCGCTG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000623705.1 ENST00000624967.2 |
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| CDS CCA 90 bp | GCCCCTCAGTCCTGGACGCGGCCGACCGCGCGGAGGGCGTGGGATTaGGACCGCCGAACCGTGGGGTCCGAGCAGCACCGCGTCCTCTTC | + |
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Preference number: 5 (lower is better) Translates to: APQSWTRPTARRAWD*DRRTVGSEQHRVLF Trigger: GAAGAGGACGCGGTGCTGCTCGGACCCCACGGTTCGGCGGTCCCAATCCCACGCCCTCCGCGCGGTCGGCCGCGTCCAGGACTGAGGGGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000623705.1 ENST00000624967.2 |
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| CDS GCA 90 bp | CGCTTCGTTCCAGGGCTTTTTGCAGACGCCTGGACCGGGCCCACATaGACCTGGGCTGCTCCCGCCCGGGGCGCCACCACTCGCGCGGCC | + |
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Preference number: 5 (lower is better) Translates to: RFVPGLFADAWTGPT*TWAAPARGATTRAA Trigger: GGCCGCGCGAGTGGTGGCGCCCCGGGCGGGAGCAGCCCAGGTGCATGTGGGCCCGGTCCAGGCGTCTGCAAAAAGCCCTGGAACGAAGCG 73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000623705.1 ENST00000624967.2 |
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| CDS CCA 90 bp | TCTCTCGGGGGAAGGACGCAGCGAGCGCTGGACTGCCCCGCGGCTTaGGCGCAGTGTGCGGCTTGGCAGCGTGGACTCGCCGGCACCTCG | + |
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Preference number: 5 (lower is better) Translates to: SLGGRTQRALDCPAA*AQCAAWQRGLAGTS Trigger: CGAGGTGCCGGCGAGTCCACGCTGCCAAGCCGCACACTGCGCCCAAGCCGCGGGGCAGTCCAGCGCTCGCTGCGTCCTTCCCCCGAGAGA 73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000623705.1 ENST00000624967.2 |
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| CDS CCA 90 bp | CCCACCCAGCCTCCAGGTCTCTCGGGGGAAGGACGCAGCGAGCGCTaGACTGCCCCGCGGCTTGGGCGCAGTGTGCGGCTTGGCAGCGTG | + |
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Preference number: 5 (lower is better) Translates to: PTQPPGLSGEGRSER*TAPRLGRSVRLGSV Trigger: CACGCTGCCAAGCCGCACACTGCGCCCAAGCCGCGGGGCAGTCCAGCGCTCGCTGCGTCCTTCCCCCGAGAGACCTGGAGGCTGGGTGGG 73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000623705.1 ENST00000624967.2 |
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| CDS GCA 90 bp | CCAGCCTCCAGGTCTCTCGGGGGAAGGACGCAGCGAGCGCTGGACTaGCCCGCGGCTTGGGCGCAGTGTGCGGCTTGGCAGCGTGGACTC | + |
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Preference number: 5 (lower is better) Translates to: PASRSLGGRTQRALD*PAAWAQCAAWQRGL Trigger: GAGTCCACGCTGCCAAGCCGCACACTGCGCCCAAGCCGCGGGGCAGTCCAGCGCTCGCTGCGTCCTTCCCCCGAGAGACCTGGAGGCTGG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000623705.1 ENST00000624967.2 |
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| CDS CCA 90 bp | TATTGTGCCCCTCAGTCCTGGACGCGGCCGACCGCGCGGAGGGCGTaGGATTGGGACCGCCGAACCGTGGGGTCCGAGCAGCACCGCGTC | + |
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Preference number: 5 (lower is better) Translates to: YCAPQSWTRPTARRA*DWDRRTVGSEQHRV Trigger: GACGCGGTGCTGCTCGGACCCCACGGTTCGGCGGTCCCAATCCCACGCCCTCCGCGCGGTCGGCCGCGTCCAGGACTGAGGGGCACAATA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000623705.1 ENST00000624967.2 |
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| CDS CCA 90 bp | GTTCCAGGGCTTTTTGCAGACGCCTGGACCGGGCCCACATGCACCTaGGCTGCTCCCGCCCGGGGCGCCACCACTCGCGCGGCCAAGAGA | + |
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Preference number: 5 (lower is better) Translates to: VPGLFADAWTGPTCT*AAPARGATTRAAKR Trigger: TCTCTTGGCCGCGCGAGTGGTGGCGCCCCGGGCGGGAGCAGCCCAGGTGCATGTGGGCCCGGTCCAGGCGTCTGCAAAAAGCCCTGGAAC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000623705.1 ENST00000624967.2 |
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| CDS CCA 90 bp | GACGGGAGCCACACCCCGCGACGAGCTGACCTCCCCTCGCTGGTCTaGGTAAGGAGCCTGCTGCCCTTTCCGCCTCTCTTCCGGCTCCTC | + |
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Preference number: 5 (lower is better) Translates to: DGSHTPRRADLPSLV*VRSLLPFPPLFRLL Trigger: GAGGAGCCGGAAGAGAGGCGGAAAGGGCAGCAGGCTCCTTACCCAGACCAGCGAGGGGAGGTCAGCTCGTCGCGGGGTGTGGCTCCCGTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000623705.1 ENST00000624967.2 |
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| CDS CCA 90 bp | CACCAGGGGTCACTGCAGCTTCAGAGCTATTGTGCCCCTCAGTCCTaGACGCGGCCGACCGCGCGGAGGGCGTGGGATTGGGACCGCCGA | + |
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Preference number: 5 (lower is better) Translates to: HQGSLQLQSYCAPQS*TRPTARRAWDWDRR Trigger: TCGGCGGTCCCAATCCCACGCCCTCCGCGCGGTCGGCCGCGTCCAGGACTGAGGGGCACAATAGCTCTGAAGCTGCAGTGACCCCTGGTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000623705.1 ENST00000624967.2 |
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| CDS GCA 90 bp | ACCTCGGCTGCCTGTGCACGGACATCGGGACCCACCAGGGGTCACTaGAGCTTCAGAGCTATTGTGCCCCTCAGTCCTGGACGCGGCCGA | + |
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Preference number: 5 (lower is better) Translates to: TSAACARTSGPTRGH*SFRAIVPLSPGRGR Trigger: TCGGCCGCGTCCAGGACTGAGGGGCACAATAGCTCTGAAGCTGCAGTGACCCCTGGTGGGTCCCGATGTCCGTGCACAGGCAGCCGAGGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000623705.1 ENST00000624967.2 |
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| CDS TCA 90 bp | AAGCCGTATTCCGCCGCCGCGGCAGGCATTCCCGGAGGGAGAGCTTaGACTTGGCTACACACGGCCACCCGTAATGAGCTCGGGAGTCCC | + |
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Preference number: 5 (lower is better) Translates to: KPYSAAAAGIPGGRA*TWLHTATRNELGSP Trigger: GGGACTCCCGAGCTCATTACGGGTGGCCGTGTGTAGCCAAGTTCAAGCTCTCCCTCCGGGAATGCCTGCCGCGGCGGCGGAATACGGCTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000623705.1 ENST00000624967.2 |
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| CDS CCA 90 bp | AAATTTATATTGCACTTTGGCGGTTATGCTGATCCTGTGTTTGGATaGGGTCACAATAGCAGGGAAGGCCGAGGCTTCCTACAGAAGGTC | + |
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Preference number: 5 (lower is better) Translates to: KFILHFGGYADPVFG*GHNSREGRGFLQKV Trigger: GACCTTCTGTAGGAAGCCTCGGCCTTCCCTGCTATTGTGACCCCATCCAAACACAGGATCAGCATAACCGCCAAAGTGCAATATAAATTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000623705.1 |
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| CDS TCA 90 bp | GAAGGCCGAGGCTTCCTACAGAAGGTCCTTTGTGGCAAATCACTATaGGAGGAAACTCCATCAAAAGTCGCCAATTGTTCATTTCATTTC | + |
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Preference number: 5 (lower is better) Translates to: EGRGFLQKVLCGKSL*EETPSKVANCSFHF Trigger: GAAATGAAATGAACAATTGGCGACTTTTGATGGAGTTTCCTCTCATAGTGATTTGCCACAAAGGACCTTCTGTAGGAAGCCTCGGCCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000623705.1 |
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| CDS CAA 90 bp | GCAGCGAGCGCTGGACTGCCCCGCGGCTTGGGCGCAGTGTGCGGCTaGGCAGCGTGGACTCGCCGGCACCTCGCCGCTGGGACCACGGTC | + |
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Preference number: 6 (lower is better) Translates to: AASAGLPRGLGAVCG*AAWTRRHLAAGTTV Trigger: GACCGTGGTCCCAGCGGCGAGGTGCCGGCGAGTCCACGCTGCCAAGCCGCACACTGCGCCCAAGCCGCGGGGCAGTCCAGCGCTCGCTGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000623705.1 ENST00000624967.2 |
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| CDS GCA 72 bp | GCGAGCGCTGGACTGCCCCGCGGCTTGGGCGCAGTGTaGGGCTTGGCAGCGTGGACTCGCCGGCACCTCGCC | + |
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Preference number: 6 (lower is better) Translates to: ASAGLPRGLGAV*GLAAWTRRHLA Trigger: GGCGAGGTGCCGGCGAGTCCACGCTGCCAAGCCGCACACTGCGCCCAAGCCGCGGGGCAGTCCAGCGCTCGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000623705.1 ENST00000624967.2 |
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| CDS CCA 72 bp | CCCCGCGGCTTGGGCGCAGTGTGCGGCTTGGCAGCGTaGACTCGCCGGCACCTCGCCGCTGGGACCACGGTC | + |
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Preference number: 6 (lower is better) Translates to: PRGLGAVCGLAA*TRRHLAAGTTV Trigger: GACCGTGGTCCCAGCGGCGAGGTGCCGGCGAGTCCACGCTGCCAAGCCGCACACTGCGCCCAAGCCGCGGGG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000623705.1 ENST00000624967.2 |
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| CDS CCA 72 bp | TCCTGGACGCGGCCGACCGCGCGGAGGGCGTGGGATTaGGACCGCCGAACCGTGGGGTCCGAGCAGCACCGC | + |
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Preference number: 6 (lower is better) Translates to: SWTRPTARRAWD*DRRTVGSEQHR Trigger: GCGGTGCTGCTCGGACCCCACGGTTCGGCGGTCCCAATCCCACGCCCTCCGCGCGGTCGGCCGCGTCCAGGA 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000623705.1 ENST00000624967.2 |
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| CDS CCA 72 bp | CTGGACTGCCCCGCGGCTTGGGCGCAGTGTGCGGCTTaGCAGCGTGGACTCGCCGGCACCTCGCCGCTGGGA | + |
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Preference number: 6 (lower is better) Translates to: LDCPAAWAQCAA*QRGLAGTSPLG Trigger: TCCCAGCGGCGAGGTGCCGGCGAGTCCACGCTGCCAAGCCGCACACTGCGCCCAAGCCGCGGGGCAGTCCAG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000623705.1 ENST00000624967.2 |
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| CDS CCA 72 bp | CCTCAGTCCTGGACGCGGCCGACCGCGCGGAGGGCGTaGGATTGGGACCGCCGAACCGTGGGGTCCGAGCAG | + |
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Preference number: 6 (lower is better) Translates to: PQSWTRPTARRA*DWDRRTVGSEQ Trigger: CTGCTCGGACCCCACGGTTCGGCGGTCCCAATCCCACGCCCTCCGCGCGGTCGGCCGCGTCCAGGACTGAGG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000623705.1 ENST00000624967.2 |
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| CDS GCA 72 bp | GGACGGGGTAGCGGACGGAGCGACGACCTTCGCCTCTaGCCCTGCGCCCATGGTCGGGGCGTCGTGGGTGCT | + |
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Preference number: 6 (lower is better) Translates to: GRGSGRSDDLRL*PCAHGRGVVGA Trigger: AGCACCCACGACGCCCCGACCATGGGCGCAGGGGCAGAGGCGAAGGTCGTCGCTCCGTCCGCTACCCCGTCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000623705.1 ENST00000624967.2 |
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| CDS CCA 72 bp | CTTTTTGCAGACGCCTGGACCGGGCCCACATGCACCTaGGCTGCTCCCGCCCGGGGCGCCACCACTCGCGCG | + |
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Preference number: 6 (lower is better) Translates to: LFADAWTGPTCT*AAPARGATTRA Trigger: CGCGCGAGTGGTGGCGCCCCGGGCGGGAGCAGCCCAGGTGCATGTGGGCCCGGTCCAGGCGTCTGCAAAAAG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000623705.1 ENST00000624967.2 |
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| CDS CCA 72 bp | GGAAGGACGCAGCGAGCGCTGGACTGCCCCGCGGCTTaGGCGCAGTGTGCGGCTTGGCAGCGTGGACTCGCC | + |
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Preference number: 6 (lower is better) Translates to: GRTQRALDCPAA*AQCAAWQRGLA Trigger: GGCGAGTCCACGCTGCCAAGCCGCACACTGCGCCCAAGCCGCGGGGCAGTCCAGCGCTCGCTGCGTCCTTCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000623705.1 ENST00000624967.2 |
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| CDS CCA 72 bp | CCGCGCGGAGGGCGTGGGATTGGGACCGCCGAACCGTaGGGTCCGAGCAGCACCGCGTCCTCTTCTCCCCAC | + |
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Preference number: 6 (lower is better) Translates to: PRGGRGIGTAEP*GPSSTASSSPH Trigger: GTGGGGAGAAGAGGACGCGGTGCTGCTCGGACCCCACGGTTCGGCGGTCCCAATCCCACGCCCTCCGCGCGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000623705.1 ENST00000624967.2 |
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| CDS CAA 72 bp | GGGAAGGACGCAGCGAGCGCTGGACTGCCCCGCGGCTaGGGCGCAGTGTGCGGCTTGGCAGCGTGGACTCGC | + |
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Preference number: 6 (lower is better) Translates to: GKDAASAGLPRG*GAVCGLAAWTR Trigger: GCGAGTCCACGCTGCCAAGCCGCACACTGCGCCCAAGCCGCGGGGCAGTCCAGCGCTCGCTGCGTCCTTCCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000623705.1 ENST00000624967.2 |
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| CDS CAA 90 bp | GTCTCTCGGGGGAAGGACGCAGCGAGCGCTGGACTGCCCCGCGGCTaGGGCGCAGTGTGCGGCTTGGCAGCGTGGACTCGCCGGCACCTC | + |
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Preference number: 6 (lower is better) Translates to: VSRGKDAASAGLPRG*GAVCGLAAWTRRHL Trigger: GAGGTGCCGGCGAGTCCACGCTGCCAAGCCGCACACTGCGCCCAAGCCGCGGGGCAGTCCAGCGCTCGCTGCGTCCTTCCCCCGAGAGAC 73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000623705.1 ENST00000624967.2 |
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| CDS CAA 90 bp | TGCCCCTCAGTCCTGGACGCGGCCGACCGCGCGGAGGGCGTGGGATaGGGACCGCCGAACCGTGGGGTCCGAGCAGCACCGCGTCCTCTT | + |
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Preference number: 6 (lower is better) Translates to: CPSVLDAADRAEGVG*GPPNRGVRAAPRPL Trigger: AAGAGGACGCGGTGCTGCTCGGACCCCACGGTTCGGCGGTCCCAATCCCACGCCCTCCGCGCGGTCGGCCGCGTCCAGGACTGAGGGGCA 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000623705.1 ENST00000624967.2 |
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| CDS GCA 72 bp | GGTAGCGGACGGAGCGACGACCTTCGCCTCTGCCCCTaGGCCCATGGTCGGGGCGTCGTGGGTGCTCCTCAC | + |
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Preference number: 6 (lower is better) Translates to: GSGRSDDLRLCP*AHGRGVVGAPH Trigger: GTGAGGAGCACCCACGACGCCCCGACCATGGGCGCAGGGGCAGAGGCGAAGGTCGTCGCTCCGTCCGCTACC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000623705.1 ENST00000624967.2 |
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| CDS CCA 72 bp | CCTCCAGGTCTCTCGGGGGAAGGACGCAGCGAGCGCTaGACTGCCCCGCGGCTTGGGCGCAGTGTGCGGCTT | + |
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Preference number: 6 (lower is better) Translates to: PPGLSGEGRSER*TAPRLGRSVRL Trigger: AAGCCGCACACTGCGCCCAAGCCGCGGGGCAGTCCAGCGCTCGCTGCGTCCTTCCCCCGAGAGACCTGGAGG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000623705.1 ENST00000624967.2 |
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| CDS CAA 90 bp | AAGGAGCCTGCTGCCCTTTCCGCCTCTCTTCCGGCTCCTCGGCGCTaGCGGCTGGGGGACGGGGTAGCGGACGGAGCGACGACCTTCGCC | + |
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Preference number: 6 (lower is better) Translates to: KEPAALSASLPAPRR*RLGDGVADGATTFA Trigger: GGCGAAGGTCGTCGCTCCGTCCGCTACCCCGTCCCCCAGCCGCAAGCGCCGAGGAGCCGGAAGAGAGGCGGAAAGGGCAGCAGGCTCCTT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000623705.1 ENST00000624967.2 |
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| CDS CCA 72 bp | GGGGTCCGCTTCGTTCCAGGGCTTTTTGCAGACGCCTaGACCGGGCCCACATGCACCTGGGCTGCTCCCGCC | + |
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Preference number: 6 (lower is better) Translates to: GVRFVPGLFADA*TGPTCTWAAPA Trigger: GGCGGGAGCAGCCCAGGTGCATGTGGGCCCGGTCCAGGCGTCTGCAAAAAGCCCTGGAACGAAGCGGACCCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000623705.1 ENST00000624967.2 |
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| CDS GCA 72 bp | AGCGGGGCTCAGTGTCGTCCGCAGCTCAACCTCGGCTaGCTGTGCACGGACATCGGGACCCACCAGGGGTCA | + |
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Preference number: 6 (lower is better) Translates to: SGAQCRPQLNLG*LCTDIGTHQGS Trigger: TGACCCCTGGTGGGTCCCGATGTCCGTGCACAGGCAGCCGAGGTTGAGCTGCGGACGACACTGAGCCCCGCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000623705.1 ENST00000624967.2 |
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| CDS GCA 72 bp | GCTCAGTGTCGTCCGCAGCTCAACCTCGGCTGCCTGTaGACGGACATCGGGACCCACCAGGGGTCACTGCAG | + |
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Preference number: 6 (lower is better) Translates to: AQCRPQLNLGCL*TDIGTHQGSLQ Trigger: CTGCAGTGACCCCTGGTGGGTCCCGATGTCCGTGCACAGGCAGCCGAGGTTGAGCTGCGGACGACACTGAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000623705.1 ENST00000624967.2 |
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| CDS CCA 72 bp | CACACCCCGCGACGAGCTGACCTCCCCTCGCTGGTCTaGGTAAGGAGCCTGCTGCCCTTTCCGCCTCTCTTC | + |
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Preference number: 6 (lower is better) Translates to: HTPRRADLPSLV*VRSLLPFPPLF Trigger: GAAGAGAGGCGGAAAGGGCAGCAGGCTCCTTACCCAGACCAGCGAGGGGAGGTCAGCTCGTCGCGGGGTGTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000623705.1 ENST00000624967.2 |
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| CDS CCA 72 bp | TCACTGCAGCTTCAGAGCTATTGTGCCCCTCAGTCCTaGACGCGGCCGACCGCGCGGAGGGCGTGGGATTGG | + |
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Preference number: 6 (lower is better) Translates to: SLQLQSYCAPQS*TRPTARRAWDW Trigger: CCAATCCCACGCCCTCCGCGCGGTCGGCCGCGTCCAGGACTGAGGGGCACAATAGCTCTGAAGCTGCAGTGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000623705.1 ENST00000624967.2 |
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| CDS TCA 72 bp | TCCGCCGCCGCGGCAGGCATTCCCGGAGGGAGAGCTTaGACTTGGCTACACACGGCCACCCGTAATGAGCTC | + |
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Preference number: 6 (lower is better) Translates to: SAAAAGIPGGRA*TWLHTATRNEL Trigger: GAGCTCATTACGGGTGGCCGTGTGTAGCCAAGTTCAAGCTCTCCCTCCGGGAATGCCTGCCGCGGCGGCGGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000623705.1 ENST00000624967.2 |
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| CDS GCA 72 bp | GCCTGTGCACGGACATCGGGACCCACCAGGGGTCACTaGAGCTTCAGAGCTATTGTGCCCCTCAGTCCTGGA | + |
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Preference number: 6 (lower is better) Translates to: ACARTSGPTRGH*SFRAIVPLSPG Trigger: TCCAGGACTGAGGGGCACAATAGCTCTGAAGCTGCAGTGACCCCTGGTGGGTCCCGATGTCCGTGCACAGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000623705.1 ENST00000624967.2 |
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| CDS CCA 72 bp | CAGGGAAGGCCGAGGCTTCCTACAGAAGGTCCTTTGTaGCAAATCACTATGAGAGGAAACTCCATCAAAAGT | + |
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Preference number: 6 (lower is better) Translates to: QGRPRLPTEGPL*QITMRGNSIKS Trigger: ACTTTTGATGGAGTTTCCTCTCATAGTGATTTGCCACAAAGGACCTTCTGTAGGAAGCCTCGGCCTTCCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000623705.1 |
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| CDS TCA 72 bp | GGCTTCCTACAGAAGGTCCTTTGTGGCAAATCACTATaGGAGGAAACTCCATCAAAAGTCGCCAATTGTTCA | + |
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Preference number: 6 (lower is better) Translates to: GFLQKVLCGKSL*EETPSKVANCS Trigger: TGAACAATTGGCGACTTTTGATGGAGTTTCCTCTCATAGTGATTTGCCACAAAGGACCTTCTGTAGGAAGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000623705.1 |
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| CDS CAA 72 bp | ATCACTATGAGAGGAAACTCCATCAAAAGTCGCCAATaGTTCATTTCATTTCTACTGTGCTACGGAAGCCTG | + |
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Preference number: 6 (lower is better) Translates to: ITMRGNSIKSRQ*FISFLLCYGSL Trigger: CAGGCTTCCGTAGCACAGTAGAAATGAAATGAACAATTGGCGACTTTTGATGGAGTTTCCTCTCATAGTGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000623705.1 |
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| CDS CAA 90 bp | TTGTGGCAAATCACTATGAGAGGAAACTCCATCAAAAGTCGCCAATaGTTCATTTCATTTCTACTGTGCTACGGAAGCCTGGTTTTGTTT | + |
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Preference number: 6 (lower is better) Translates to: LWQITMRGNSIKSRQ*FISFLLCYGSLVLF Trigger: AAACAAAACCAGGCTTCCGTAGCACAGTAGAAATGAAATGAACAATTGGCGACTTTTGATGGAGTTTCCTCTCATAGTGATTTGCCACAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000623705.1 |
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