RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EPB41L3 (Homo sapiens)

Ensembl gene IDs: ENSG00000082397

Ensembl transcript IDs: ENST00000341928.7, ENST00000342933.7, ENST00000400111.8, ENST00000540638.6, ENST00000542652.6, ENST00000544123.5, ENST00000545076.5, ENST00000578196.5, ENST00000578395.1, ENST00000578431.1, ENST00000578432.2, ENST00000578503.5, ENST00000578524.5, ENST00000578618.5, ENST00000579271.5, ENST00000579951.2, ENST00000580179.2, ENST00000580308.5, ENST00000580316.5, ENST00000580647.5, ENST00000580866.2, ENST00000580989.5, ENST00000581292.5, ENST00000581387.5, ENST00000581757.1, ENST00000581833.5, ENST00000582592.1, ENST00000582703.5, ENST00000582729.5, ENST00000584015.5, ENST00000584055.1, ENST00000584651.5, ENST00000584670.1, ENST00000585142.5, ENST00000637651.1

Found 1189 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCACTCGCGTGCACCACACGCCGCTCCTCCACCAACACGGTCTCCTaGACCACCTTCTCAGTGCTAAGCGGCAGGTGGTGCACGGTGGGT +
Preference number: 1 (lower is better)
Translates to: PLACTTRRSSTNTVS*TTFSVLSGRWCTVG
Trigger: ACCCACCGTGCACCACCTGCCGCTTAGCACTGAGAAGGTGGTGCAGGAGACCGTGTTGGTGGAGGAGCGGCGTGTGGTGCACGCGAGTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637651.1
3UTR GCA 90 bp TTCTCCAGCTGTGGAGCCTTCTTGAGGTCATCTTCTTCAGGACTCTaGCGGCGAGACTCGGCCTCCTTGATGGGGGCCAGGGATTCGGAC +
Preference number: 1 (lower is better)
Translates to: FSSCGAFLRSSSSGL*RRDSASLMGARDSD
Trigger: GTCCGAATCCCTGGCCCCCATCAAGGAGGCCGAGTCTCGCCGGCAGAGTCCTGAAGAAGATGACCTCAAGAAGGCTCCACAGCTGGAGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637651.1
3UTR GCA 90 bp GGCAGAGCCCTCTTTCCCTTTAATGCCTGTGAATGCGGGCTGTGCTaGAGCATCCCCGCTGTCTCCCGCCGAGTAAGAAGCATCCCCACT +
Preference number: 1 (lower is better)
Translates to: GRALFPFNACECGLC*SIPAVSRRVRSIPT
Trigger: AGTGGGGATGCTTCTTACTCGGCGGGAGACAGCGGGGATGCTGCAGCACAGCCCGCATTCACAGGCATTAAAGGGAAAGAGGGCTCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637651.1
3UTR GCA 90 bp CAAGGCAGAGCCCTCTTTCCCTTTAATGCCTGTGAATGCGGGCTGTaGTGCAGCATCCCCGCTGTCTCCCGCCGAGTAAGAAGCATCCCC +
Preference number: 1 (lower is better)
Translates to: QGRALFPFNACECGL*CSIPAVSRRVRSIP
Trigger: GGGGATGCTTCTTACTCGGCGGGAGACAGCGGGGATGCTGCAGCACAGCCCGCATTCACAGGCATTAAAGGGAAAGAGGGCTCTGCCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637651.1
3UTR CCA 90 bp ACCAACACGGTCTCCTGCACCACCTTCTCAGTGCTAAGCGGCAGGTaGTGCACGGTGGGTTCCGTCTCTATTCCACTGGACTCCGTCTTG +
Preference number: 1 (lower is better)
Translates to: TNTVSCTTFSVLSGR*CTVGSVSIPLDSVL
Trigger: CAAGACGGAGTCCAGTGGAATAGAGACGGAACCCACCGTGCACCACCTGCCGCTTAGCACTGAGAAGGTGGTGCAGGAGACCGTGTTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637651.1
3UTR GCA 90 bp AACACGGTCTCCTGCACCACCTTCTCAGTGCTAAGCGGCAGGTGGTaGACGGTGGGTTCCGTCTCTATTCCACTGGACTCCGTCTTGGTT +
Preference number: 1 (lower is better)
Translates to: NTVSCTTFSVLSGRW*TVGSVSIPLDSVLV
Trigger: AACCAAGACGGAGTCCAGTGGAATAGAGACGGAACCCACCGTGCACCACCTGCCGCTTAGCACTGAGAAGGTGGTGCAGGAGACCGTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637651.1
3UTR CCA 90 bp GGGGGCCAGGGATTCGGACAATTTCCGCTGTGTCGTCTGGACCTCTaGTCCTCTCTTGGATTTCTCATCAGCGAGGGTTTCCAGGACCTC +
Preference number: 1 (lower is better)
Translates to: GGQGFGQFPLCRLDL*SSLGFLISEGFQDL
Trigger: GAGGTCCTGGAAACCCTCGCTGATGAGAAATCCAAGAGAGGACCAGAGGTCCAGACGACACAGCGGAAATTGTCCGAATCCCTGGCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637651.1
3UTR CCA 90 bp TCCTTGATGGGGGCCAGGGATTCGGACAATTTCCGCTGTGTCGTCTaGACCTCTGGTCCTCTCTTGGATTTCTCATCAGCGAGGGTTTCC +
Preference number: 1 (lower is better)
Translates to: SLMGARDSDNFRCVV*TSGPLLDFSSARVS
Trigger: GGAAACCCTCGCTGATGAGAAATCCAAGAGAGGACCAGAGGTCCAGACGACACAGCGGAAATTGTCCGAATCCCTGGCCCCCATCAAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637651.1
3UTR TCA 90 bp GTGGCCCCAATGAGTGACACTGGTTACCACTACTCGGGAGGCGGATaGCTCAGTAACGTAATGGGCAGTAGCAACGGTAAAGGCTGGTTC +
Preference number: 1 (lower is better)
Translates to: VAPMSDTGYHYSGGG*LSNVMGSSNGKGWF
Trigger: GAACCAGCCTTTACCGTTGCTACTGCCCATTACGTTACTGAGTCATCCGCCTCCCGAGTAGTGGTAACCAGTGTCACTCATTGGGGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637651.1
3UTR TCA 90 bp CTGCCTCAAAAACTGTCATGCTGGAATTGCAAACTGTGGCCCCAATaGGTGACACTGGTTACCACTACTCGGGAGGCGGATGACTCAGTA +
Preference number: 1 (lower is better)
Translates to: LPQKLSCWNCKLWPQ*VTLVTTTREADDSV
Trigger: TACTGAGTCATCCGCCTCCCGAGTAGTGGTAACCAGTGTCACTCATTGGGGCCACAGTTTGCAATTCCAGCATGACAGTTTTTGAGGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637651.1
3UTR CCA 90 bp ATTCGGACAATTTCCGCTGTGTCGTCTGGACCTCTGGTCCTCTCTTaGATTTCTCATCAGCGAGGGTTTCCAGGACCTCATATTCTGCCA +
Preference number: 1 (lower is better)
Translates to: IRTISAVSSGPLVLS*ISHQRGFPGPHILP
Trigger: TGGCAGAATATGAGGTCCTGGAAACCCTCGCTGATGAGAAATCCAAGAGAGGACCAGAGGTCCAGACGACACAGCGGAAATTGTCCGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637651.1
3UTR CCA 90 bp GCTGCTCTCAACATAAAGCCAAGCAGCAAGAGAAACGGAAAGGTTTaGGGTGGAAGGGGACTGCCTCAAAAACTGTCATGCTGGAATTGC +
Preference number: 1 (lower is better)
Translates to: AALNIKPSSKRNGKV*GGRGLPQKLSCWNC
Trigger: GCAATTCCAGCATGACAGTTTTTGAGGCAGTCCCCTTCCACCCCAAACCTTTCCGTTTCTCTTGCTGCTTGGCTTTATGTTGAGAGCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637651.1
3UTR TCA 90 bp CCGGGAATGATCTTCATGGACTCTGGTATTTCTTTCTCCATTTTCTaGAGTGCTTCTGTAGTGGAGGGCTGCTCCACTTTCTCACCCTCT +
Preference number: 1 (lower is better)
Translates to: PGMIFMDSGISFSIF*SASVVEGCSTFSPS
Trigger: AGAGGGTGAGAAAGTGGAGCAGCCCTCCACTACAGAAGCACTTCAGAAAATGGAGAAAGAAATACCAGAGTCCATGAAGATCATTCCCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637651.1
3UTR TCA 90 bp CATCAGCGAGGGTTTCCAGGACCTCATATTCTGCCAGGCCGGGAATaGTCTTCATGGACTCTGGTATTTCTTTCTCCATTTTCTGAAGTG +
Preference number: 1 (lower is better)
Translates to: HQRGFPGPHILPGRE*SSWTLVFLSPFSEV
Trigger: CACTTCAGAAAATGGAGAAAGAAATACCAGAGTCCATGAAGATCATTCCCGGCCTGGCAGAATATGAGGTCCTGGAAACCCTCGCTGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637651.1
3UTR GCA 90 bp TCTCTTGGATTTCTCATCAGCGAGGGTTTCCAGGACCTCATATTCTaGCAGGCCGGGAATGATCTTCATGGACTCTGGTATTTCTTTCTC +
Preference number: 1 (lower is better)
Translates to: SLGFLISEGFQDLIF*QAGNDLHGLWYFFL
Trigger: GAGAAAGAAATACCAGAGTCCATGAAGATCATTCCCGGCCTGGCAGAATATGAGGTCCTGGAAACCCTCGCTGATGAGAAATCCAAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637651.1
3UTR TCA 90 bp TGGAAATTTCTAGCTTTACTCCTCCCGGTGAAACACTGCCAAAACTaGTGGTTTCCGTCTTCACCGTTGAGGACTCAAAATGAGGTTTTT +
Preference number: 1 (lower is better)
Translates to: WKFLALLLPVKHCQN*WFPSSPLRTQNEVF
Trigger: AAAAACCTCATTTTGAGTCCTCAACGGTGAAGACGGAAACCATCAGTTTTGGCAGTGTTTCACCGGGAGGAGTAAAGCTAGAAATTTCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637651.1
3UTR TCA 90 bp AGAATAACCTCTAGGGTTGATGGGACAGTTTTCTGGAAAATTATTTaGCGAGAAGTAACCACAGAGTCAGCAGAGTCTCCTTCCTGCATT +
Preference number: 1 (lower is better)
Translates to: RITSRVDGTVFWKII*REVTTESAESPSCI
Trigger: AATGCAGGAAGGAGACTCTGCTGACTCTGTGGTTACTTCTCGTCAAATAATTTTCCAGAAAACTGTCCCATCAACCCTAGAGGTTATTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637651.1
3UTR GCA 90 bp AATCAGGGCAACTGCTACATGCAGGTCTGTGATGGGACCATACAGTaGTCATGTTATTATCTAATAATTATGGCTGCAATCTCTTCTCCT +
Preference number: 1 (lower is better)
Translates to: NQGNCYMQVCDGTIQ*SCYYLIIMAAISSP
Trigger: AGGAGAAGAGATTGCAGCCATAATTATTAGATAATAACATGAGCACTGTATGGTCCCATCACAGACCTGCATGTAGCAGTTGCCCTGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637651.1
3UTR CCA 90 bp GATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATTCTTCTaGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGA +
Preference number: 1 (lower is better)
Translates to: DLSASVFINGQGQFF*TEIFHGQIQVSWVR
Trigger: TCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCAGAAGAATTGACCTTGACCATTAATAAAGACACTGGCAGAGAGATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
3UTR GCA 90 bp ACATCACAGGTATATTCTGATCCATCGAGAAGTATCACTTTGCACTaGATGCTTTTAGGCTTTTTGACAATCTTTAATGGAGACCGAGAG +
Preference number: 1 (lower is better)
Translates to: TSQVYSDPSRSITLH*MLLGFLTIFNGDRE
Trigger: CTCTCGGTCTCCATTAAAGATTGTCAAAAAGCCTAAAAGCATGCAGTGCAAAGTGATACTTCTCGATGGATCAGAATATACCTGTGATGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000580866.2
3UTR TCA 90 bp AAGAATCCTTTAAGAAAATCAGGGCAACTGCTACATGCAGGTCTGTaGTGGGACCATACAGTGCTCATGTTATTATCTAATAATTATGGC +
Preference number: 1 (lower is better)
Translates to: KNPLRKSGQLLHAGL*WDHTVLMLLSNNYG
Trigger: GCCATAATTATTAGATAATAACATGAGCACTGTATGGTCCCATCACAGACCTGCATGTAGCAGTTGCCCTGATTTTCTTAAAGGATTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637651.1
3UTR-3UTR CCA 90 bp CATCCCCACTCGCGTGCACCACACGCCGCTCCTCCACCAACACGGTCTCCTGCAAGCCTCCCCAGGAGCTaGGACTACAGGCACATGCCA +
Preference number: 2 (lower is better)
Translates to: HPHSRAPHAAPPPTRSPASLPRS*DYRHMP
Trigger: TGGCATGTGCCTGTAGTCCCAGCTCCTGGGGAGGCT...TGCAGGAGACCGTGTTGGTGGAGGAGCGGCGTGTGGTGCACGCGAGTGGGGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637651.1
3UTR-3UTR GCA 90 bp GGATGGCTGCACTCTGCTCCTCTTGTCGCTCACGGGAAGCAGCGGCTGTCTCTTTCTTCTTCAGGACTCTaGCGGCGAGACTCGGCCTCC +
Preference number: 2 (lower is better)
Translates to: GWLHSAPLVAHGKQRLSLSSSGL*RRDSAS
Trigger: GGAGGCCGAGTCTCGCCGGCAGAGTCCTGAAGAAGA...AAGAGACAGCCGCTGCTTCCCGTGAGCGACAAGAGGAGCAGAGTGCAGCCATCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637651.1
3UTR-3UTR CCA 90 bp GGATGGCTGCACTCTGCTCCTCTTGTCGCTCACGGGAAGCAGCGGCTGTCTCTTGCAGGTGGTGCACGGTaGGTTCCGTCTCTATTCCAC +
Preference number: 2 (lower is better)
Translates to: GWLHSAPLVAHGKQRLSLAGGAR*VPSLFH
Trigger: GTGGAATAGAGACGGAACCCACCGTGCACCACCTGC...AAGAGACAGCCGCTGCTTCCCGTGAGCGACAAGAGGAGCAGAGTGCAGCCATCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637651.1
3UTR CAA 90 bp TTGAGGTCATCTTCTTCAGGACTCTGCCGGCGAGACTCGGCCTCCTaGATGGGGGCCAGGGATTCGGACAATTTCCGCTGTGTCGTCTGG +
Preference number: 2 (lower is better)
Translates to: LRSSSSGLCRRDSAS*MGARDSDNFRCVVW
Trigger: CCAGACGACACAGCGGAAATTGTCCGAATCCCTGGCCCCCATCAAGGAGGCCGAGTCTCGCCGGCAGAGTCCTGAAGAAGATGACCTCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637651.1
3UTR CAA 90 bp AAGAGGCCCACTTTTAAGACCTCACTCTCGGGCACTTGCTCTGTTTaGCTGAAGCGTCTGCCTTCCAGGCCAGGGAGGACGGCCACATCC +
Preference number: 2 (lower is better)
Translates to: KRPTFKTSLSGTCSV*LKRLPSRPGRTATS
Trigger: GGATGTGGCCGTCCTCCCTGGCCTGGAAGGCAGACGCTTCAGCAAAACAGAGCAAGTGCCCGAGAGTGAGGTCTTAAAAGTGGGCCTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637651.1
3UTR-3UTR CCA 90 bp CCGCCGAGTAAGAAGCATCCCCACTCGCGTGCACCACACGCCGCTCCTCCACCATTATTAGGATCAGGGTaGCGCCGATTTAAGCAGATA +
Preference number: 2 (lower is better)
Translates to: PPSKKHPHSRAPHAAPPPLLGSG*RRFKQI
Trigger: TATCTGCTTAAATCGGCGCCACCCTGATCCTAATAA...TGGTGGAGGAGCGGCGTGTGGTGCACGCGAGTGGGGATGCTTCTTACTCGGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637651.1
3UTR-3UTR TCA 90 bp TGCACTCTGCTCCTCTTGTCGCTCACGGGAAGCAGCGGCTGTCTCTTCCTGTTCAAACTGTGGCCCCAATaGGTGACACTGGTTACCACT +
Preference number: 2 (lower is better)
Translates to: CTLLLLSLTGSSGCLFLFKLWPQ*VTLVTT
Trigger: AGTGGTAACCAGTGTCACTCATTGGGGCCACAGTTT...GAACAGGAAGAGACAGCCGCTGCTTCCCGTGAGCGACAAGAGGAGCAGAGTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637651.1
3UTR-3UTR GCA 90 bp TCCTCTCCATCTTCTGGTGTGATCTCTGTCTCTTTATGGACCACTACTTTGGTCGCATCCCCACTCGCGTaGACCACACGCCGCTCCTCC +
Preference number: 2 (lower is better)
Translates to: SSPSSGVISVSLWTTTLVASPLA*TTRRSS
Trigger: GGAGGAGCGGCGTGTGGTGCACGCGAGTGGGGATGC...GACCAAAGTAGTGGTCCATAAAGAGACAGAGATCACACCAGAAGATGGAGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637651.1
3UTR-3UTR TCA 90 bp CCGCCGAGTAAGAAGCATCCCCACTCGCGTGCACCACACGCCGCTCCTCCACCAAATCTTATTTACAACTaGAGTTCACTGTCTCAGGAG +
Preference number: 2 (lower is better)
Translates to: PPSKKHPHSRAPHAAPPPNLIYN*SSLSQE
Trigger: CTCCTGAGACAGTGAACTTCAGTTGTAAATAAGATT...TGGTGGAGGAGCGGCGTGTGGTGCACGCGAGTGGGGATGCTTCTTACTCGGCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637651.1
3UTR-3UTR CCA 90 bp CATCCCCACTCGCGTGCACCACACGCCGCTCCTCCACCAACACGGTCTCCTGCAAGGAATCTCAGAGTTTaGAAACGAAAAGAATGGGAA +
Preference number: 2 (lower is better)
Translates to: HPHSRAPHAAPPPTRSPARNLRV*KRKEWE
Trigger: TTCCCATTCTTTTCGTTTCCAAACTCTGAGATTCCT...TGCAGGAGACCGTGTTGGTGGAGGAGCGGCGTGTGGTGCACGCGAGTGGGGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637651.1
3UTR-3UTR GCA 90 bp ATTCGGACAGGCTCTTCCTTCGGGGACCAAAGAGGCCCACTTTTAAGACCTCACAGGGCAACTGCTACATaGAGGTCTGTGATGGGACCA +
Preference number: 2 (lower is better)
Translates to: IRTGSSFGDQRGPLLRPHRATAT*RSVMGP
Trigger: TGGTCCCATCACAGACCTGCATGTAGCAGTTGCCCT...GTGAGGTCTTAAAAGTGGGCCTCTTTGGTCCCCGAAGGAAGAGCCTGTCCGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637651.1
3UTR-3UTR CCA 90 bp ATTCGGACAGGCTCTTCCTTCGGGGACCAAAGAGGCCCACTTTTAAGACCTCACCCTCTGGTCCTCTCTTaGATTTCTCATCAGCGAGGG +
Preference number: 2 (lower is better)
Translates to: IRTGSSFGDQRGPLLRPHPLVLS*ISHQRG
Trigger: CCCTCGCTGATGAGAAATCCAAGAGAGGACCAGAGG...GTGAGGTCTTAAAAGTGGGCCTCTTTGGTCCCCGAAGGAAGAGCCTGTCCGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637651.1
3UTR CAA 90 bp GATTCGGACAATTTCCGCTGTGTCGTCTGGACCTCTGGTCCTCTCTaGGATTTCTCATCAGCGAGGGTTTCCAGGACCTCATATTCTGCC +
Preference number: 2 (lower is better)
Translates to: DSDNFRCVVWTSGPL*DFSSARVSRTSYSA
Trigger: GGCAGAATATGAGGTCCTGGAAACCCTCGCTGATGAGAAATCCAAGAGAGGACCAGAGGTCCAGACGACACAGCGGAAATTGTCCGAATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637651.1
3UTR-3UTR TCA 90 bp TCATTGCAAGCCACAGCAGCACTATCACATCTTGGGAACAGGGAGCTGGAAATACTGCCAGGCCGGGAATaGTCTTCATGGACTCTGGTA +
Preference number: 2 (lower is better)
Translates to: SLQATAALSHLGNRELEILPGRE*SSWTLV
Trigger: TACCAGAGTCCATGAAGATCATTCCCGGCCTGGCAG...TATTTCCAGCTCCCTGTTCCCAAGATGTGATAGTGCTGCTGTGGCTTGCAATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637651.1
3UTR-3UTR GCA 90 bp TTCCTTCGGGGACCAAAGAGGCCCACTTTTAAGACCTCACTCTCGGGCACTTGCGAAAATCAGGGCAACTaGTACATGCAGGTCTGTGAT +
Preference number: 2 (lower is better)
Translates to: FLRGPKRPTFKTSLSGTCENQGN*YMQVCD
Trigger: ATCACAGACCTGCATGTAGCAGTTGCCCTGATTTTC...GCAAGTGCCCGAGAGTGAGGTCTTAAAAGTGGGCCTCTTTGGTCCCCGAAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637651.1
3UTR-3UTR TCA 90 bp ACATCACAGGTATATTCTGATCCATCGAGAAGTATCACTTTGCACTGCATGCTTAAGGGGAACAGCAGATaGCCCCTCATAGCTGCCTCT +
Preference number: 2 (lower is better)
Translates to: TSQVYSDPSRSITLHCMLKGNSR*PLIAAS
Trigger: AGAGGCAGCTATGAGGGGTCATCTGCTGTTCCCCTT...AAGCATGCAGTGCAAAGTGATACTTCTCGATGGATCAGAATATACCTGTGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580866.2
3UTR-3UTR TCA 90 bp TGGTGCACGGTGGGTTCCGTCTCTATTCCACTGGACTCCGTCTTGGTTTCCATTAGGCATAATACAATATaGCCAGGTAGGTTAATAGCT +
Preference number: 2 (lower is better)
Translates to: WCTVGSVSIPLDSVLVSIRHNTI*PGRLIA
Trigger: AGCTATTAACCTACCTGGTCATATTGTATTATGCCT...AATGGAAACCAAGACGGAGTCCAGTGGAATAGAGACGGAACCCACCGTGCACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637651.1
3UTR-3UTR TCA 90 bp TCCTCTCCATCTTCTGGTGTGATCTCTGTCTCTTTATGGACCACTACTTTGGTCCTTTACTCCTCCCGGTaGAACACTGCCAAAACTGAT +
Preference number: 2 (lower is better)
Translates to: SSPSSGVISVSLWTTTLVLYSSR*NTAKTD
Trigger: ATCAGTTTTGGCAGTGTTTCACCGGGAGGAGTAAAG...GACCAAAGTAGTGGTCCATAAAGAGACAGAGATCACACCAGAAGATGGAGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637651.1
3UTR-3UTR GCA 90 bp CGGGGACCAAAGAGGCCCACTTTTAAGACCTCACTCTCGGGCACTTGCTCTGTTTCTAATAATTATGGCTaGAATCTCTTCTCCTCTGAA +
Preference number: 2 (lower is better)
Translates to: RGPKRPTFKTSLSGTCSVSNNYG*NLFSSE
Trigger: TTCAGAGGAGAAGAGATTGCAGCCATAATTATTAGA...AACAGAGCAAGTGCCCGAGAGTGAGGTCTTAAAAGTGGGCCTCTTTGGTCCCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637651.1
3UTR-3UTR CCA 90 bp CATTCGGACAGGCTCTTCCTTCGGGGACCAAAGAGGCCCACTTTTAAGACCTCATTTCTTTATCACACTTaGCTAGTGGGGAAACCAATA +
Preference number: 2 (lower is better)
Translates to: HSDRLFLRGPKRPTFKTSFLYHT*LVGKPI
Trigger: TATTGGTTTCCCCACTAGCCAAGTGTGATAAAGAAA...TGAGGTCTTAAAAGTGGGCCTCTTTGGTCCCCGAAGGAAGAGCCTGTCCGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637651.1
3UTR-3UTR GCA 90 bp TCTAGCTTTACTCCTCCCGGTGAAACACTGCCAAAACTGATGGTTTCCGTCTTCCCTCAAAAACTGTCATaGTGGAATTGCAAACTGTGG +
Preference number: 2 (lower is better)
Translates to: SSFTPPGETLPKLMVSVFPQKLS*WNCKLW
Trigger: CCACAGTTTGCAATTCCAGCATGACAGTTTTTGAGG...GAAGACGGAAACCATCAGTTTTGGCAGTGTTTCACCGGGAGGAGTAAAGCTAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637651.1
3UTR-3UTR CCA 90 bp TCCTCTCCATCTTCTGGTGTGATCTCTGTCTCTTTATGGACCACTACTTTGGTCAAAGTTTCTGAAATGTaGATGGCTGCACTCTGCTCC +
Preference number: 2 (lower is better)
Translates to: SSPSSGVISVSLWTTTLVKVSEM*MAALCS
Trigger: GGAGCAGAGTGCAGCCATCCACATTTCAGAAACTTT...GACCAAAGTAGTGGTCCATAAAGAGACAGAGATCACACCAGAAGATGGAGAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637651.1
3UTR-3UTR GCA 90 bp CCTATGAATTCTGTTGGTTTTCGCGCAGACTCTAATAAACTGAAGATTTCAGAGCAGGACCTCATATTCTaGCAGGCCGGGAATGATCTT +
Preference number: 2 (lower is better)
Translates to: PMNSVGFRADSNKLKISEQDLIF*QAGNDL
Trigger: AAGATCATTCCCGGCCTGGCAGAATATGAGGTCCTG...CTCTGAAATCTTCAGTTTATTAGAGTCTGCGCGAAAACCAACAGAATTCATAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637651.1
3UTR-3UTR GCA 90 bp TCATTGCAAGCCACAGCAGCACTATCACATCTTGGGAACAGGGAGCTGGAAATAGATGCTGAATCAGATTaGTTTATTATGGGAAGATCT +
Preference number: 2 (lower is better)
Translates to: SLQATAALSHLGNRELEIDAESD*FIMGRS
Trigger: AGATCTTCCCATAATAAAGCAATCTGATTCAGCATC...TATTTCCAGCTCCCTGTTCCCAAGATGTGATAGTGCTGCTGTGGCTTGCAATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637651.1
3UTR-3UTR GCA 90 bp CACTGCATGCTTTTAGGCTTTTTGACAATCTTTAATGGAGACCGAGAGAGTTTAATATTCGAGCTGTTTTaGAGCCCTGGCAGCAAACTC +
Preference number: 2 (lower is better)
Translates to: HCMLLGFLTIFNGDRESLIFELF*SPGSKL
Trigger: GAGTTTGCTGCCAGGGCTGCAAAACAGCTCGAATAT...TAAACTCTCTCGGTCTCCATTAAAGATTGTCAAAAAGCCTAAAAGCATGCAGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000580866.2
3UTR-3UTR CCA 90 bp GTGTTACATGAGACCACGGTTTATATTGTTGGTTATGAACGTGCAGGTATAGCTCAGATACAAGTCAGTTaGGTTAGAAGAGGGAACTCC +
Preference number: 2 (lower is better)
Translates to: VLHETTVYIVGYERAGIAQIQVS*VRRGNS
Trigger: GGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTG...AGCTATACCTGCACGTTCATAACCAACAATATAAACCGTGGTCTCATGTAACAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
3UTR-3UTR CCA 90 bp TCATTGCAAGCCACAGCAGCACTATCACATCTTGGGAACAGGGAGCTGGAAATAATCAACTACCTCAGTTaGTATTCTGTCTACAATAAC +
Preference number: 2 (lower is better)
Translates to: SLQATAALSHLGNRELEIINYLS*YSVYNN
Trigger: GTTATTGTAGACAGAATACCAACTGAGGTAGTTGAT...TATTTCCAGCTCCCTGTTCCCAAGATGTGATAGTGCTGCTGTGGCTTGCAATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637651.1
3UTR-3UTR TCA 90 bp AAAGCAAGATTGGAAGCATTACATATTTCCAGAGGGTCAGAGAGTCATTACTGTTTGGCACATCTAATCTaGGGAAAATCTGACACACCG +
Preference number: 2 (lower is better)
Translates to: KARLEALHISRGSESHYCLAHLI*GKSDTP
Trigger: CGGTGTGTCAGATTTTCCTCAGATTAGATGTGCCAA...ACAGTAATGACTCTCTGACCCTCTGGAAATATGTAATGCTTCCAATCTTGCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000544123.5
ENST00000637651.1
3UTR-3UTR TCA 90 bp AGCAAGATTGGAAGCATTACATATTTCCAGAGGGTCAGAGAGTCATTACTGTTTTTGGCACATCTAATCTaGGGAAAATCTGACACACCG +
Preference number: 2 (lower is better)
Translates to: SKIGSITYFQRVRESLLFLAHLI*GKSDTP
Trigger: CGGTGTGTCAGATTTTCCTCAGATTAGATGTGCCAA...AAACAGTAATGACTCTCTGACCCTCTGGAAATATGTAATGCTTCCAATCTTGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000544123.5
ENST00000637651.1
3UTR-3UTR GCA 90 bp GACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCTGGTTTATGACTGCATTCATGTaGAAGCTAAGTTATTCCTCT +
Preference number: 2 (lower is better)
Translates to: DRYKSVGLEEGTPYRLWFMTAFM*KLSYSS
Trigger: AGAGGAATAACTTAGCTTGCACATGAATGCAGTCAT...AAACCAGAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000545076.5
ENST00000637651.1
3UTR CAA 90 bp GATCCATCGAGAAGTATCACTTTGCACTGCATGCTTTTAGGCTTTTaGACAATCTTTAATGGAGACCGAGAGAGTTTACTGCTAGATGAT +
Preference number: 2 (lower is better)
Translates to: DPSRSITLHCMLLGF*TIFNGDRESLLLDD
Trigger: ATCATCTAGCAGTAAACTCTCTCGGTCTCCATTAAAGATTGTCAAAAAGCCTAAAAGCATGCAGTGCAAAGTGATACTTCTCGATGGATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580866.2
3UTR-3UTR TCA 90 bp GTGTTACATGAGACCACGGTTTATATTGTTGGTTATGAACGTGCAGGTATAGCTTCAATTCTTCTGGACTaGAATTTTCCACGGACAGAT +
Preference number: 2 (lower is better)
Translates to: VLHETTVYIVGYERAGIASILLD*NFPRTD
Trigger: ATCTGTCCGTGGAAAATTTCAGTCCAGAAGAATTGA...AGCTATACCTGCACGTTCATAACCAACAATATAAACCGTGGTCTCATGTAACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
3UTR-3UTR TCA 90 bp AAAGCAAGATTGGAAGCATTACATATTTCCAGAGGGTCAGAGAGTCATTACTGTACGTGCAGGTATAGCTaGAAACTGAGACATTTTGTG +
Preference number: 2 (lower is better)
Translates to: KARLEALHISRGSESHYCTCRYS*KLRHFV
Trigger: CACAAAATGTCTCAGTTTTCAGCTATACCTGCACGT...ACAGTAATGACTCTCTGACCCTCTGGAAATATGTAATGCTTCCAATCTTGCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000544123.5
ENST00000637651.1
3UTR-3UTR TCA 90 bp TCTGATCCATCGAGAAGTATCACTTTGCACTGCATGCTTTTAGGCTTTTTGACATCGTCTTCTAATTGCTaGTATTCGAGCTGTTTTGCA +
Preference number: 2 (lower is better)
Translates to: SDPSRSITLHCMLLGFLTSSSNC*YSSCFA
Trigger: TGCAAAACAGCTCGAATATCAGCAATTAGAAGACGA...TGTCAAAAAGCCTAAAAGCATGCAGTGCAAAGTGATACTTCTCGATGGATCAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000580866.2
3UTR-3UTR GCA 90 bp TGCATGATCAGTGGTGAGGTGGAGACTTATGAGCTAGATCTATATCCACAATTTTTTCTTCGGAATACATaGTGGACTAGAGGAATAGCA +
Preference number: 2 (lower is better)
Translates to: CMISGEVETYELDLYPQFFLRNT*WTRGIA
Trigger: TGCTATTCCTCTAGTCCAGCATGTATTCCGAAGAAA...AAATTGTGGATATAGATCTAGCTCATAAGTCTCCACCTCACCACTGATCATGCA
40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000579951.2
3UTR-3UTR CCA 90 bp CTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATCAGATACAAGTCAGTTaGGTTAGAAGAGGGAACTCC +
Preference number: 2 (lower is better)
Translates to: LYYGKISLPVSLLMVKVNQIQVS*VRRGNS
Trigger: GGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTG...ATTGACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
3UTR-3UTR CCA 90 bp GTTGCTTCATGCATTATCGGTTTAGTGATGCTGAATCAGATTGCTTTATTATGGCAGATACAAGTCAGTTaGGTTAGAAGAGGGAACTCC +
Preference number: 2 (lower is better)
Translates to: VASCIIGLVMLNQIALLWQIQVS*VRRGNS
Trigger: GGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTG...CCATAATAAAGCAATCTGATTCAGCATCACTAAACCGATAATGCATGAAGCAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
3UTR-3UTR CCA 90 bp CGTTGCTTCATGCATTATCGGTTTAGTGATGCTGAATCAGATTGCTTTATTATGCAGATACAAGTCAGTTaGGTTAGAAGAGGGAACTCC +
Preference number: 2 (lower is better)
Translates to: RCFMHYRFSDAESDCFIMQIQVS*VRRGNS
Trigger: GGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTG...CATAATAAAGCAATCTGATTCAGCATCACTAAACCGATAATGCATGAAGCAACG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
3UTR-3UTR TCA 90 bp TTCAGTGCATTTGCCATTTTTATTTCGCTATGCAGAAACATACATTCACCATGGTTAAGCTCTCTGGATTaGACACAGACCAAAGCAAAC +
Preference number: 2 (lower is better)
Translates to: FSAFAIFISLCRNIHSPWLSSLD*TQTKAN
Trigger: GTTTGCTTTGGTCTGTGTTCAATCCAGAGAGCTTAA...CCATGGTGAATGTATGTTTCTGCATAGCGAAATAAAAATGGCAAATGCACTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000544123.5
3UTR-3UTR TCA 90 bp AGTCACAATCTTTTTCAAATCACCATCAACTACCTCAGTTGGTATTCTGTCTACTTAAGCTCTCTGGATTaGACACAGACCAAAGCAAAC +
Preference number: 2 (lower is better)
Translates to: SHNLFQITINYLSWYSVYLSSLD*TQTKAN
Trigger: GTTTGCTTTGGTCTGTGTTCAATCCAGAGAGCTTAA...GTAGACAGAATACCAACTGAGGTAGTTGATGGTGATTTGAAAAAGATTGTGACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637651.1
3UTR-3UTR TCA 90 bp TTATCAAACAGCACTTGTCCTCTGGAGCGTTTCTCTACATCACAGGTATATTCTCTGCTAGATGATTTCTaGGAAAGTTTATCGTCTTCT +
Preference number: 2 (lower is better)
Translates to: LSNSTCPLERFSTSQVYSLLDDF*ESLSSS
Trigger: AGAAGACGATAAACTTTCTCAGAAATCATCTAGCAG...AGAATATACCTGTGATGTAGAGAAACGCTCCAGAGGACAAGTGCTGTTTGATAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580866.2
3UTR-3UTR GCA 90 bp CAAAGCAAGATTGGAAGCATTACATATTTCCAGAGGGTCAGAGAGTCATTACTGATGACTGCATTCATGTaGAAGCTAAGTTATTCCTCT +
Preference number: 2 (lower is better)
Translates to: QSKIGSITYFQRVRESLLMTAFM*KLSYSS
Trigger: AGAGGAATAACTTAGCTTGCACATGAATGCAGTCAT...CAGTAATGACTCTCTGACCCTCTGGAAATATGTAATGCTTCCAATCTTGCTTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000637651.1
3UTR-3UTR GCA 90 bp GTGTTACATGAGACCACGGTTTATATTGTTGGTTATGAACGTGCAGGTATAGCTATGACTGCATTCATGTaGAAGCTAAGTTATTCCTCT +
Preference number: 2 (lower is better)
Translates to: VLHETTVYIVGYERAGIAMTAFM*KLSYSS
Trigger: AGAGGAATAACTTAGCTTGCACATGAATGCAGTCAT...AGCTATACCTGCACGTTCATAACCAACAATATAAACCGTGGTCTCATGTAACAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000545076.5
ENST00000637651.1
3UTR-3UTR CCA 90 bp AAAGCAAGATTGGAAGCATTACATATTTCCAGAGGGTCAGAGAGTCATTACTGTCAGATTGCTTTATTATaGGAAGATCTCTCTGCCAGT +
Preference number: 2 (lower is better)
Translates to: KARLEALHISRGSESHYCQIALL*EDLSAS
Trigger: ACTGGCAGAGAGATCTTCCCATAATAAAGCAATCTG...ACAGTAATGACTCTCTGACCCTCTGGAAATATGTAATGCTTCCAATCTTGCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000544123.5
ENST00000637651.1
3UTR CAA 90 bp TTCTCTACATCACAGGTATATTCTGATCCATCGAGAAGTATCACTTaGCACTGCATGCTTTTAGGCTTTTTGACAATCTTTAATGGAGAC +
Preference number: 2 (lower is better)
Translates to: FSTSQVYSDPSRSIT*HCMLLGFLTIFNGD
Trigger: GTCTCCATTAAAGATTGTCAAAAAGCCTAAAAGCATGCAGTGCAAAGTGATACTTCTCGATGGATCAGAATATACCTGTGATGTAGAGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000580866.2
3UTR-3UTR TCA 90 bp GTTGCTTCATGCATTATCGGTTTAGTGATGCTGAATCAGATTGCTTTATTATGGTCAATTCTTCTGGACTaGAATTTTCCACGGACAGAT +
Preference number: 2 (lower is better)
Translates to: VASCIIGLVMLNQIALLWSILLD*NFPRTD
Trigger: ATCTGTCCGTGGAAAATTTCAGTCCAGAAGAATTGA...CCATAATAAAGCAATCTGATTCAGCATCACTAAACCGATAATGCATGAAGCAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
3UTR-3UTR GCA 90 bp AGCAAGATTGGAAGCATTACATATTTCCAGAGGGTCAGAGAGTCATTACTGTTTATGACTGCATTCATGTaGAAGCTAAGTTATTCCTCT +
Preference number: 2 (lower is better)
Translates to: SKIGSITYFQRVRESLLFMTAFM*KLSYSS
Trigger: AGAGGAATAACTTAGCTTGCACATGAATGCAGTCAT...AAACAGTAATGACTCTCTGACCCTCTGGAAATATGTAATGCTTCCAATCTTGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000637651.1
3UTR-3UTR GCA 90 bp TGCTCACGGTCACCACCTTGTAAGTCACAATCTTTTTCAAATCACCATCAACTATTTATCGTTGCTTCATaGATTATCGGTTTAGTGATG +
Preference number: 2 (lower is better)
Translates to: CSRSPPCKSQSFSNHHQLFIVAS*IIGLVM
Trigger: CATCACTAAACCGATAATGCATGAAGCAACGATAAA...TAGTTGATGGTGATTTGAAAAAGATTGTGACTTACAAGGTGGTGACCGTGAGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637651.1
3UTR-3UTR CCA 90 bp GTTGCTTCATGCATTATCGGTTTAGTGATGCTGAATCAGATTGCTTTATTATGGCAAGGTCAATTCTTCTaGACTGAAATTTTCCACGGA +
Preference number: 2 (lower is better)
Translates to: VASCIIGLVMLNQIALLWQGQFF*TEIFHG
Trigger: TCCGTGGAAAATTTCAGTCCAGAAGAATTGACCTTG...CCATAATAAAGCAATCTGATTCAGCATCACTAAACCGATAATGCATGAAGCAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
3UTR-3UTR GCA 90 bp TCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATTCTTCTGGACTGAAATTTTCATGACTGCATTCATGTaGAAGCTAAGTTATTCCTCT +
Preference number: 2 (lower is better)
Translates to: SASVFINGQGQFFWTEIFMTAFM*KLSYSS
Trigger: AGAGGAATAACTTAGCTTGCACATGAATGCAGTCAT...GAAAATTTCAGTCCAGAAGAATTGACCTTGACCATTAATAAAGACACTGGCAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000545076.5
ENST00000637651.1
3UTR-3UTR GCA 90 bp AGCAAGATTGGAAGCATTACATATTTCCAGAGGGTCAGAGAGTCATTACTGTTTGATGCTGAATCAGATTaGTTTATTATGGGAAGATCT +
Preference number: 2 (lower is better)
Translates to: SKIGSITYFQRVRESLLFDAESD*FIMGRS
Trigger: AGATCTTCCCATAATAAAGCAATCTGATTCAGCATC...AAACAGTAATGACTCTCTGACCCTCTGGAAATATGTAATGCTTCCAATCTTGCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000544123.5
ENST00000637651.1
3UTR-3UTR GCA 90 bp AAAGCAAGATTGGAAGCATTACATATTTCCAGAGGGTCAGAGAGTCATTACTGTGATGCTGAATCAGATTaGTTTATTATGGGAAGATCT +
Preference number: 2 (lower is better)
Translates to: KARLEALHISRGSESHYCDAESD*FIMGRS
Trigger: AGATCTTCCCATAATAAAGCAATCTGATTCAGCATC...ACAGTAATGACTCTCTGACCCTCTGGAAATATGTAATGCTTCCAATCTTGCTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000544123.5
ENST00000637651.1
3UTR-3UTR CAA 90 bp AAGCGTCTGCCTTCCAGGCCAGGGAGGACGGCCACATCCTTCTCCAGCTGTGGATGGGGTCTCCCTATGTaGCCCAGGTCGGCCTCGAAC +
Preference number: 3 (lower is better)
Translates to: KRLPSRPGRTATSFSSCGWGLPM*PRSASN
Trigger: GTTCGAGGCCGACCTGGGCAACATAGGGAGACCCCA...TCCACAGCTGGAGAAGGATGTGGCCGTCCTCCCTGGCCTGGAAGGCAGACGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637651.1
3UTR GCA 72 bp TCCTGCACCACCTTCTCAGTGCTAAGCGGCAGGTGGTaGACGGTGGGTTCCGTCTCTATTCCACTGGACTCC +
Preference number: 3 (lower is better)
Translates to: SCTTFSVLSGRW*TVGSVSIPLDS
Trigger: GGAGTCCAGTGGAATAGAGACGGAACCCACCGTGCACCACCTGCCGCTTAGCACTGAGAAGGTGGTGCAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637651.1
3UTR GCA 72 bp GCCCTCTTTCCCTTTAATGCCTGTGAATGCGGGCTGTaGTGCAGCATCCCCGCTGTCTCCCGCCGAGTAAGA +
Preference number: 3 (lower is better)
Translates to: ALFPFNACECGL*CSIPAVSRRVR
Trigger: TCTTACTCGGCGGGAGACAGCGGGGATGCTGCAGCACAGCCCGCATTCACAGGCATTAAAGGGAAAGAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637651.1
3UTR CCA 72 bp GTCTCCTGCACCACCTTCTCAGTGCTAAGCGGCAGGTaGTGCACGGTGGGTTCCGTCTCTATTCCACTGGAC +
Preference number: 3 (lower is better)
Translates to: VSCTTFSVLSGR*CTVGSVSIPLD
Trigger: GTCCAGTGGAATAGAGACGGAACCCACCGTGCACCACCTGCCGCTTAGCACTGAGAAGGTGGTGCAGGAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637651.1
3UTR GCA 72 bp CTCTTTCCCTTTAATGCCTGTGAATGCGGGCTGTGCTaGAGCATCCCCGCTGTCTCCCGCCGAGTAAGAAGC +
Preference number: 3 (lower is better)
Translates to: LFPFNACECGLC*SIPAVSRRVRS
Trigger: GCTTCTTACTCGGCGGGAGACAGCGGGGATGCTGCAGCACAGCCCGCATTCACAGGCATTAAAGGGAAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637651.1
3UTR GCA 72 bp GGTGGTGGTACTGGTGGTTTCAGATGTGATCGTCTGTaGACTCATCAGCACGCCTGGCTCCAGATCTGTGCC +
Preference number: 3 (lower is better)
Translates to: GGGTGGFRCDRL*THQHAWLQICA
Trigger: GGCACAGATCTGGAGCCAGGCGTGCTGATGAGTGCACAGACGATCACATCTGAAACCACCAGTACCACCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637651.1
3UTR CCA 72 bp GGGGCCAGGGATTCGGACAATTTCCGCTGTGTCGTCTaGACCTCTGGTCCTCTCTTGGATTTCTCATCAGCG +
Preference number: 3 (lower is better)
Translates to: GARDSDNFRCVV*TSGPLLDFSSA
Trigger: CGCTGATGAGAAATCCAAGAGAGGACCAGAGGTCCAGACGACACAGCGGAAATTGTCCGAATCCCTGGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637651.1
3UTR CCA 72 bp GCAGGTGGTGCACGGTGGGTTCCGTCTCTATTCCACTaGACTCCGTCTTGGTTTCCATTTTCTGAACCCAGC +
Preference number: 3 (lower is better)
Translates to: AGGARWVPSLFH*TPSWFPFSEPS
Trigger: GCTGGGTTCAGAAAATGGAAACCAAGACGGAGTCCAGTGGAATAGAGACGGAACCCACCGTGCACCACCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637651.1
3UTR GCA 72 bp AAGAGGCCCACTTTTAAGACCTCACTCTCGGGCACTTaGTCTGTTTTGCTGAAGCGTCTGCCTTCCAGGCCA +
Preference number: 3 (lower is better)
Translates to: KRPTFKTSLSGT*SVLLKRLPSRP
Trigger: TGGCCTGGAAGGCAGACGCTTCAGCAAAACAGAGCAAGTGCCCGAGAGTGAGGTCTTAAAAGTGGGCCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637651.1
3UTR-3UTR CAA 90 bp AAGCGTCTGCCTTCCAGGCCAGGGAGGACGGCCACATCCTTCTCCAGCTGTGGATTTTCTTTATCACACTaGGCTAGTGGGGAAACCAAT +
Preference number: 3 (lower is better)
Translates to: KRLPSRPGRTATSFSSCGFSLSH*ASGETN
Trigger: ATTGGTTTCCCCACTAGCCAAGTGTGATAAAGAAAA...TCCACAGCTGGAGAAGGATGTGGCCGTCCTCCCTGGCCTGGAAGGCAGACGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637651.1
3UTR TCA 72 bp TGTCATGCTGGAATTGCAAACTGTGGCCCCAATGAGTaGCACTGGTTACCACTACTCGGGAGGCGGATGACT +
Preference number: 3 (lower is better)
Translates to: CHAGIANCGPNE*HWLPLLGRRMT
Trigger: AGTCATCCGCCTCCCGAGTAGTGGTAACCAGTGTCACTCATTGGGGCCACAGTTTGCAATTCCAGCATGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637651.1
3UTR CCA 72 bp GGATTCGGACAATTTCCGCTGTGTCGTCTGGACCTCTaGTCCTCTCTTGGATTTCTCATCAGCGAGGGTTTC +
Preference number: 3 (lower is better)
Translates to: GFGQFPLCRLDL*SSLGFLISEGF
Trigger: GAAACCCTCGCTGATGAGAAATCCAAGAGAGGACCAGAGGTCCAGACGACACAGCGGAAATTGTCCGAATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637651.1
3UTR-3UTR CAA 90 bp TGGTGCACGGTGGGTTCCGTCTCTATTCCACTGGACTCCGTCTTGGTTTCCATTAGCTGTGGAGCCTTCTaGAGGTCATCTTCTTCAGGA +
Preference number: 3 (lower is better)
Translates to: WCTVGSVSIPLDSVLVSISCGAF*RSSSSG
Trigger: TCCTGAAGAAGATGACCTCAAGAAGGCTCCACAGCT...AATGGAAACCAAGACGGAGTCCAGTGGAATAGAGACGGAACCCACCGTGCACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637651.1
3UTR TCA 72 bp AAACTGTCATGCTGGAATTGCAAACTGTGGCCCCAATaGGTGACACTGGTTACCACTACTCGGGAGGCGGAT +
Preference number: 3 (lower is better)
Translates to: KLSCWNCKLWPQ*VTLVTTTREAD
Trigger: ATCCGCCTCCCGAGTAGTGGTAACCAGTGTCACTCATTGGGGCCACAGTTTGCAATTCCAGCATGACAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637651.1
3UTR TCA 72 bp ATGAGTGACACTGGTTACCACTACTCGGGAGGCGGATaGCTCAGTAACGTAATGGGCAGTAGCAACGGTAAA +
Preference number: 3 (lower is better)
Translates to: MSDTGYHYSGGG*LSNVMGSSNGK
Trigger: TTTACCGTTGCTACTGCCCATTACGTTACTGAGTCATCCGCCTCCCGAGTAGTGGTAACCAGTGTCACTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637651.1
3UTR CCA 72 bp CTCAGTAACGTAATGGGCAGTAGCAACGGTAAAGGCTaGTTCCTGGGAATATCTCCATTCGGACAGGCTCTT +
Preference number: 3 (lower is better)
Translates to: LSNVMGSSNGKG*FLGISPFGQAL
Trigger: AAGAGCCTGTCCGAATGGAGATATTCCCAGGAACCAGCCTTTACCGTTGCTACTGCCCATTACGTTACTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637651.1
3UTR CCA 72 bp AACATAAAGCCAAGCAGCAAGAGAAACGGAAAGGTTTaGGGTGGAAGGGGACTGCCTCAAAAACTGTCATGC +
Preference number: 3 (lower is better)
Translates to: NIKPSSKRNGKV*GGRGLPQKLSC
Trigger: GCATGACAGTTTTTGAGGCAGTCCCCTTCCACCCCAAACCTTTCCGTTTCTCTTGCTGCTTGGCTTTATGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637651.1
3UTR-3UTR CAA 90 bp ATTCGGACAGGCTCTTCCTTCGGGGACCAAAGAGGCCCACTTTTAAGACCTCACCAATTCTTCGAAGCTTaGCATTTTAATAGTGCCAGA +
Preference number: 3 (lower is better)
Translates to: IRTGSSFGDQRGPLLRPHQFFEA*HFNSAR
Trigger: TCTGGCACTATTAAAATGCAAAGCTTCGAAGAATTG...GTGAGGTCTTAAAAGTGGGCCTCTTTGGTCCCCGAAGGAAGAGCCTGTCCGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637651.1
3UTR TCA 72 bp CTAGCTTTACTCCTCCCGGTGAAACACTGCCAAAACTaGTGGTTTCCGTCTTCACCGTTGAGGACTCAAAAT +
Preference number: 3 (lower is better)
Translates to: LALLLPVKHCQN*WFPSSPLRTQN
Trigger: ATTTTGAGTCCTCAACGGTGAAGACGGAAACCATCAGTTTTGGCAGTGTTTCACCGGGAGGAGTAAAGCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637651.1
3UTR TCA 72 bp GATCTGTGCCTGGATCGACCTGTGATGATTCATATGTaGTGGTTTTGGTTTCGGTGTGAACTACTGGCACTT +
Preference number: 3 (lower is better)
Translates to: DLCLDRPVMIHM*WFWFRCELLAL
Trigger: AAGTGCCAGTAGTTCACACCGAAACCAAAACCATCACATATGAATCATCACAGGTCGATCCAGGCACAGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637651.1
3UTR CCA 72 bp CCCTTCATTGCAAGCCACAGCAGCACTATCACATCTTaGGAACAGGGAGCTGGAAATAAAATGGAAAGTGTT +
Preference number: 3 (lower is better)
Translates to: PFIASHSSTITS*EQGAGNKMESV
Trigger: AACACTTTCCATTTTATTTCCAGCTCCCTGTTCCCAAGATGTGATAGTGCTGCTGTGGCTTGCAATGAAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637651.1
3UTR CCA 72 bp TTTTGGTTTCGGTGTGAACTACTGGCACTTCCTTCGTaGAAATTTCTAGCTTTACTCCTCCCGGTGAAACAC +
Preference number: 3 (lower is better)
Translates to: FWFRCELLALPS*KFLALLLPVKH
Trigger: GTGTTTCACCGGGAGGAGTAAAGCTAGAAATTTCCACGAAGGAAGTGCCAGTAGTTCACACCGAAACCAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637651.1
3UTR TCA 72 bp TCCTCTGGAGCGTTTCTCTACATCACAGGTATATTCTaGTCCATCGAGAAGTATCACTTTGCACTGCATGCT +
Preference number: 3 (lower is better)
Translates to: SSGAFLYITGIF*SIEKYHFALHA
Trigger: AGCATGCAGTGCAAAGTGATACTTCTCGATGGATCAGAATATACCTGTGATGTAGAGAAACGCTCCAGAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580866.2
3UTR TCA 72 bp GTTATTCCTCTGGTCAATCCTCTCCATCTTCTGGTGTaGTCTCTGTCTCTTTATGGACCACTACTTTGGTCA +
Preference number: 3 (lower is better)
Translates to: VIPLVNPLHLLV*SLSLYGPLLWS
Trigger: TGACCAAAGTAGTGGTCCATAAAGAGACAGAGATCACACCAGAAGATGGAGAGGATTGACCAGAGGAATAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637651.1
3UTR GCA 72 bp CTGGTTTTCCTAACGGTTTGCATGACTGCATTCATGTaGAAGCTAAGTTATTCCTCTGGTCAATCCTCTCCA +
Preference number: 3 (lower is better)
Translates to: LVFLTVCMTAFM*KLSYSSGQSSP
Trigger: TGGAGAGGATTGACCAGAGGAATAACTTAGCTTGCACATGAATGCAGTCATGCAAACCGTTAGGAAAACCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637651.1
3UTR-3UTR CAA 90 bp GGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATTCTTCTGGAGGTTTTCCTAACGGTTaGCATGACTGCATTCATGTG +
Preference number: 3 (lower is better)
Translates to: GKISLPVSLLMVKVNSSGGFPNG*HDCIHV
Trigger: CACATGAATGCAGTCATGCAAACCGTTAGGAAAACC...TCCAGAAGAATTGACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
3UTR-3UTR CAA 90 bp ACACTTTATCAAACAGCACTTGTCCTCTGGAGCGTTTCTCTACATCACAGGTATTCGAGAAGTATCACTTaGCACTGCATGCTTTTAGGC +
Preference number: 3 (lower is better)
Translates to: TLYQTALVLWSVSLHHRYSRSIT*HCMLLG
Trigger: GCCTAAAAGCATGCAGTGCAAAGTGATACTTCTCGA...ATACCTGTGATGTAGAGAAACGCTCCAGAGGACAAGTGCTGTTTGATAAAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580866.2
3UTR-3UTR CAA 90 bp TCTAGCTTTACTCCTCCCGGTGAAACACTGCCAAAACTGATGGTTTCCGTCTTCGTTTTAATGCTGACTTaGCACTGCGGTATTGATTTA +
Preference number: 3 (lower is better)
Translates to: SSFTPPGETLPKLMVSVFVLMLT*HCGIDL
Trigger: TAAATCAATACCGCAGTGCAAAGTCAGCATTAAAAC...GAAGACGGAAACCATCAGTTTTGGCAGTGTTTCACCGGGAGGAGTAAAGCTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637651.1
3UTR TCA 72 bp ACATGCCATTGTGCCCGCTCCAATCTTATTTACAACTaGAGTTCACTGTCTCAGGAGTTTCTCTCTCACTTT +
Preference number: 3 (lower is better)
Translates to: TCHCARSNLIYN*SSLSQEFLSHF
Trigger: AAAGTGAGAGAGAAACTCCTGAGACAGTGAACTTCAGTTGTAAATAAGATTGGAGCGGGCACAATGGCATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637651.1
3UTR GCA 72 bp ATTTTAACATGTCAGCTGGGAGATCACCAGTTTTACTaGTCACGGTCACCACCTTGTAAGTCACAATCTTTT +
Preference number: 3 (lower is better)
Translates to: ILTCQLGDHQFY*SRSPPCKSQSF
Trigger: AAAAGATTGTGACTTACAAGGTGGTGACCGTGAGCAGTAAAACTGGTGATCTCCCAGCTGACATGTTAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637651.1
3UTR-3UTR CAA 90 bp AAAGCAAGATTGGAAGCATTACATATTTCCAGAGGGTCAGAGAGTCATTACTGTGGTTTTCCTAACGGTTaGCATGACTGCATTCATGTG +
Preference number: 3 (lower is better)
Translates to: KARLEALHISRGSESHYCGFPNG*HDCIHV
Trigger: CACATGAATGCAGTCATGCAAACCGTTAGGAAAACC...ACAGTAATGACTCTCTGACCCTCTGGAAATATGTAATGCTTCCAATCTTGCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000544123.5
ENST00000637651.1
3UTR-3UTR CAA 90 bp GTTGCTTCATGCATTATCGGTTTAGTGATGCTGAATCAGATTGCTTTATTATGGGGTTTTCCTAACGGTTaGCATGACTGCATTCATGTG +
Preference number: 3 (lower is better)
Translates to: VASCIIGLVMLNQIALLWGFPNG*HDCIHV
Trigger: CACATGAATGCAGTCATGCAAACCGTTAGGAAAACC...CCATAATAAAGCAATCTGATTCAGCATCACTAAACCGATAATGCATGAAGCAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
3UTR-3UTR CAA 90 bp CGTTGCTTCATGCATTATCGGTTTAGTGATGCTGAATCAGATTGCTTTATTATGGGTTTTCCTAACGGTTaGCATGACTGCATTCATGTG +
Preference number: 3 (lower is better)
Translates to: RCFMHYRFSDAESDCFIMGFPNG*HDCIHV
Trigger: CACATGAATGCAGTCATGCAAACCGTTAGGAAAACC...CATAATAAAGCAATCTGATTCAGCATCACTAAACCGATAATGCATGAAGCAACG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
3UTR-3UTR CAA 90 bp AGCAAGATTGGAAGCATTACATATTTCCAGAGGGTCAGAGAGTCATTACTGTTTCCACGGTTTATATTGTaGGTTATGAACGTGCAGGTA +
Preference number: 3 (lower is better)
Translates to: SKIGSITYFQRVRESLLFPRFIL*VMNVQV
Trigger: TACCTGCACGTTCATAACCAACAATATAAACCGTGG...AAACAGTAATGACTCTCTGACCCTCTGGAAATATGTAATGCTTCCAATCTTGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000544123.5
ENST00000637651.1
3UTR-3UTR CAA 90 bp AGCAAGATTGGAAGCATTACATATTTCCAGAGGGTCAGAGAGTCATTACTGTTTAGACCACGGTTTATATaGTTGGTTATGAACGTGCAG +
Preference number: 3 (lower is better)
Translates to: SKIGSITYFQRVRESLLFRPRFI*LVMNVQ
Trigger: CTGCACGTTCATAACCAACAATATAAACCGTGGTCT...AAACAGTAATGACTCTCTGACCCTCTGGAAATATGTAATGCTTCCAATCTTGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000544123.5
ENST00000637651.1
3UTR TCA 72 bp TTAAGAAAATCAGGGCAACTGCTACATGCAGGTCTGTaGTGGGACCATACAGTGCTCATGTTATTATCTAAT +
Preference number: 3 (lower is better)
Translates to: LRKSGQLLHAGL*WDHTVLMLLSN
Trigger: ATTAGATAATAACATGAGCACTGTATGGTCCCATCACAGACCTGCATGTAGCAGTTGCCCTGATTTTCTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637651.1
3UTR CCA 72 bp GCCAGTGTCTTTATTAATGGTCAAGGTCAATTCTTCTaGACTGAAATTTTCCACGGACAGATACAAGTCAGT +
Preference number: 3 (lower is better)
Translates to: ASVFINGQGQFF*TEIFHGQIQVS
Trigger: ACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCAGAAGAATTGACCTTGACCATTAATAAAGACACTGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
3UTR-3UTR CAA 90 bp AGTCACAATCTTTTTCAAATCACCATCAACTACCTCAGTTGGTATTCTGTCTACAGACCACGGTTTATATaGTTGGTTATGAACGTGCAG +
Preference number: 3 (lower is better)
Translates to: SHNLFQITINYLSWYSVYRPRFI*LVMNVQ
Trigger: CTGCACGTTCATAACCAACAATATAAACCGTGGTCT...GTAGACAGAATACCAACTGAGGTAGTTGATGGTGATTTGAAAAAGATTGTGACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637651.1
3UTR GCA 72 bp TTCATGCATTATCGGTTTAGTGATGCTGAATCAGATTaGTTTATTATGGGAAGATCTCTCTGCCAGTGTCTT +
Preference number: 3 (lower is better)
Translates to: FMHYRFSDAESD*FIMGRSLCQCL
Trigger: AAGACACTGGCAGAGAGATCTTCCCATAATAAAGCAATCTGATTCAGCATCACTAAACCGATAATGCATGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
3UTR GCA 72 bp GTATATTCTGATCCATCGAGAAGTATCACTTTGCACTaGATGCTTTTAGGCTTTTTGACAATCTTTAATGGA +
Preference number: 3 (lower is better)
Translates to: VYSDPSRSITLH*MLLGFLTIFNG
Trigger: TCCATTAAAGATTGTCAAAAAGCCTAAAAGCATGCAGTGCAAAGTGATACTTCTCGATGGATCAGAATATAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000580866.2
CDS-3UTR GCA 90 bp GGATGGCTGCACTCTGCTCCTCTTGTCGCTCACGGGAAGCAGCGGCTGTCTCTTCGCACCGGGGTGCTGTaGGCTGCAGCGGCGGCGAAC +
Preference number: 4 (lower is better)
Translates to: GWLHSAPLVAHGKQRLSLRTGVL*AAAAAN
Trigger: GTTCGCCGCCGCTGCAGCGCACAGCACCCCGGTGCG...AAGAGACAGCCGCTGCTTCCCGTGAGCGACAAGAGGAGCAGAGTGCAGCCATCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637651.1
CDS-3UTR CCA 90 bp CCGCCGAGTAAGAAGCATCCCCACTCGCGTGCACCACACGCCGCTCCTCCACCACCTGGTCCGACTCAGTaGCAGTGGTCTCCCCGTCGG +
Preference number: 4 (lower is better)
Translates to: PPSKKHPHSRAPHAAPPPPGPTQ*QWSPRR
Trigger: CCGACGGGGAGACCACTGCCACTGAGTCGGACCAGG...TGGTGGAGGAGCGGCGTGTGGTGCACGCGAGTGGGGATGCTTCTTACTCGGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637651.1
CDS-3UTR GCA 90 bp CATCCCCACTCGCGTGCACCACACGCCGCTCCTCCACCAACACGGTCTCCTGCACTAAGCGGCAGGTGGTaGACGGTGGGTTCCGTCTCT +
Preference number: 4 (lower is better)
Translates to: HPHSRAPHAAPPPTRSPALSGRW*TVGSVS
Trigger: AGAGACGGAACCCACCGTGCACCACCTGCCGCTTAG...TGCAGGAGACCGTGTTGGTGGAGGAGCGGCGTGTGGTGCACGCGAGTGGGGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637651.1
CDS-3UTR GCA 90 bp CATCCCCACTCGCGTGCACCACACGCCGCTCCTCCACCAACACGGTCTCCTGCATGTGAATGCGGGCTGTaGTGCAGCATCCCCGCTGTC +
Preference number: 4 (lower is better)
Translates to: HPHSRAPHAAPPPTRSPACECGL*CSIPAV
Trigger: GACAGCGGGGATGCTGCAGCACAGCCCGCATTCACA...TGCAGGAGACCGTGTTGGTGGAGGAGCGGCGTGTGGTGCACGCGAGTGGGGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637651.1
CDS-3UTR GCA 90 bp AAGCGTCTGCCTTCCAGGCCAGGGAGGACGGCCACATCCTTCTCCAGCTGTGGACTCCAAGTTGCCACCTaGAGCGCGCTTCGGGCGCCT +
Preference number: 4 (lower is better)
Translates to: KRLPSRPGRTATSFSSCGLQVAT*SALRAP
Trigger: AGGCGCCCGAAGCGCGCTGCAGGTGGCAACTTGGAG...TCCACAGCTGGAGAAGGATGTGGCCGTCCTCCCTGGCCTGGAAGGCAGACGCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637651.1
CDS-3UTR GCA 90 bp CATCCCCACTCGCGTGCACCACACGCCGCTCCTCCACCAACACGGTCTCCTGCACTGGCTCCAGATCTGTaGCTGGATCGACCTGTGATG +
Preference number: 4 (lower is better)
Translates to: HPHSRAPHAAPPPTRSPALAPDL*LDRPVM
Trigger: CATCACAGGTCGATCCAGGCACAGATCTGGAGCCAG...TGCAGGAGACCGTGTTGGTGGAGGAGCGGCGTGTGGTGCACGCGAGTGGGGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637651.1
CDS-3UTR GCA 90 bp TTCCTTCGGGGACCAAAGAGGCCCACTTTTAAGACCTCACTCTCGGGCACTTGCGCATCCCCACTCGCGTaGACCACACGCCGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: FLRGPKRPTFKTSLSGTCASPLA*TTRRSS
Trigger: GGAGGAGCGGCGTGTGGTGCACGCGAGTGGGGATGC...GCAAGTGCCCGAGAGTGAGGTCTTAAAAGTGGGCCTCTTTGGTCCCCGAAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637651.1
CDS-3UTR CCA 90 bp CGCTCACGGGAAGCAGCGGCTGTCTCTTCCTGTTCCAGGACAGCTTTAGCGACCGCCAGCGCCTGGTCATaGTCAATGTCTGCATCCCCC +
Preference number: 4 (lower is better)
Translates to: RSREAAAVSSCSRTALATASAWS*SMSASP
Trigger: GGGGGATGCAGACATTGACCATGACCAGGCGCTGGC...GGTCGCTAAAGCTGTCCTGGAACAGGAAGAGACAGCCGCTGCTTCCCGTGAGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637651.1
CDS-3UTR CCA 90 bp CATCCCCACTCGCGTGCACCACACGCCGCTCCTCCACCAACACGGTCTCCTGCACGGAAAGGTTTGGGGTaGAAGGGGACTGCCTCAAAA +
Preference number: 4 (lower is better)
Translates to: HPHSRAPHAAPPPTRSPARKGLG*KGTASK
Trigger: TTTTGAGGCAGTCCCCTTCCACCCCAAACCTTTCCG...TGCAGGAGACCGTGTTGGTGGAGGAGCGGCGTGTGGTGCACGCGAGTGGGGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637651.1
3UTR CAA 72 bp TCTTCTTCAGGACTCTGCCGGCGAGACTCGGCCTCCTaGATGGGGGCCAGGGATTCGGACAATTTCCGCTGT +
Preference number: 4 (lower is better)
Translates to: SSSGLCRRDSAS*MGARDSDNFRC
Trigger: ACAGCGGAAATTGTCCGAATCCCTGGCCCCCATCAAGGAGGCCGAGTCTCGCCGGCAGAGTCCTGAAGAAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637651.1
CDS-3UTR GCA 90 bp TCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCCGCACCGGGGTGCTGTaGGCTGCAGCGGCGGCGAAC +
Preference number: 4 (lower is better)
Translates to: STDRYKSVGLEEGTPYRLRTGVL*AAAAAN
Trigger: GTTCGCCGCCGCTGCAGCGCACAGCACCCCGGTGCG...GAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp TGCACTCTGCTCCTCTTGTCGCTCACGGGAAGCAGCGGCTGTCTCTTCCTGTTCGCAGGTGGTGCACGGTaGGTTCCGTCTCTATTCCAC +
Preference number: 4 (lower is better)
Translates to: CTLLLLSLTGSSGCLFLFAGGAR*VPSLFH
Trigger: GTGGAATAGAGACGGAACCCACCGTGCACCACCTGC...GAACAGGAAGAGACAGCCGCTGCTTCCCGTGAGCGACAAGAGGAGCAGAGTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637651.1
CDS-3UTR TCA 90 bp TGCACTCTGCTCCTCTTGTCGCTCACGGGAAGCAGCGGCTGTCTCTTCCTGTTCATAGTCTCCGAGCTCTaGCTGGACAGTGTAGGAGCC +
Preference number: 4 (lower is better)
Translates to: CTLLLLSLTGSSGCLFLFIVSEL*LDSVGA
Trigger: GGCTCCTACACTGTCCAGTCAGAGCTCGGAGACTAT...GAACAGGAAGAGACAGCCGCTGCTTCCCGTGAGCGACAAGAGGAGCAGAGTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637651.1
CDS-3UTR TCA 90 bp ATTCGGACAGGCTCTTCCTTCGGGGACCAAAGAGGCCCACTTTTAAGACCTCACTGGCCGAGATGGGCGTaGCTTCTTCCCCCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: IRTGSSFGDQRGPLLRPHWPRWA*LLPPSS
Trigger: GGAGGAAGGGGGAAGAAGTCACGCCCATCTCGGCCA...GTGAGGTCTTAAAAGTGGGCCTCTTTGGTCCCCGAAGGAAGAGCCTGTCCGAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000637651.1
CDS-3UTR TCA 90 bp TGCACTCTGCTCCTCTTGTCGCTCACGGGAAGCAGCGGCTGTCTCTTCCTGTTCCCGGAGTCACAGTGGTaGTCAAGTTGGTCTGAGAGA +
Preference number: 4 (lower is better)
Translates to: CTLLLLSLTGSSGCLFLFPESQW*SSWSER
Trigger: TCTCTCAGACCAACTTGATCACCACTGTGACTCCGG...GAACAGGAAGAGACAGCCGCTGCTTCCCGTGAGCGACAAGAGGAGCAGAGTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637651.1
CDS-3UTR TCA 90 bp AAGCGTCTGCCTTCCAGGCCAGGGAGGACGGCCACATCCTTCTCCAGCTGTGGATTTCAGAGCCATCCATaGGCTTTTCCCCAGAAGACT +
Preference number: 4 (lower is better)
Translates to: KRLPSRPGRTATSFSSCGFQSHP*AFPQKT
Trigger: AGTCTTCTGGGGAAAAGCTCATGGATGGCTCTGAAA...TCCACAGCTGGAGAAGGATGTGGCCGTCCTCCCTGGCCTGGAAGGCAGACGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637651.1
CDS-3UTR TCA 90 bp GGATGGCTGCACTCTGCTCCTCTTGTCGCTCACGGGAAGCAGCGGCTGTCTCTTAAACTGTGGCCCCAATaGGTGACACTGGTTACCACT +
Preference number: 4 (lower is better)
Translates to: GWLHSAPLVAHGKQRLSLKLWPQ*VTLVTT
Trigger: AGTGGTAACCAGTGTCACTCATTGGGGCCACAGTTT...AAGAGACAGCCGCTGCTTCCCGTGAGCGACAAGAGGAGCAGAGTGCAGCCATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637651.1
CDS-3UTR GCA 90 bp GACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCTGGTTTCGTCCTCGGCGGCGGTaGGCAGGAGACTCGGGCGTG +
Preference number: 4 (lower is better)
Translates to: DRYKSVGLEEGTPYRLWFRPRRR*AGDSGV
Trigger: CACGCCCGAGTCTCCTGCGCACCGCCGCCGAGGACG...AAACCAGAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342933.7
ENST00000540638.6
CDS-3UTR GCA 90 bp TCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCTGCTCCAGGGCCTGCTaGTGCTCCTCCTTGGGCGGC +
Preference number: 4 (lower is better)
Translates to: STDRYKSVGLEEGTPYRLCSRAC*CSSLGG
Trigger: GCCGCCCAAGGAGGAGCAGCAGCAGGCCCTGGAGCA...GAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp TCTAGCTTTACTCCTCCCGGTGAAACACTGCCAAAACTGATGGTTTCCGTCTTCATGGGGGCATCCTCCTaGCTGGCGGCCAGTCGCACG +
Preference number: 4 (lower is better)
Translates to: SSFTPPGETLPKLMVSVFMGASS*LAASRT
Trigger: CGTGCGACTGGCCGCCAGGCAGGAGGATGCCCCCAT...GAAGACGGAAACCATCAGTTTTGGCAGTGTTTCACCGGGAGGAGTAAAGCTAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637651.1
CDS-3UTR GCA 90 bp AAGCGTCTGCCTTCCAGGCCAGGGAGGACGGCCACATCCTTCTCCAGCTGTGGAGATCACCAGTTTTACTaGTCACGGTCACCACCTTGT +
Preference number: 4 (lower is better)
Translates to: KRLPSRPGRTATSFSSCGDHQFY*SRSPPC
Trigger: ACAAGGTGGTGACCGTGAGCAGTAAAACTGGTGATC...TCCACAGCTGGAGAAGGATGTGGCCGTCCTCCCTGGCCTGGAAGGCAGACGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637651.1
CDS-3UTR CCA 90 bp CATCCCCACTCGCGTGCACCACACGCCGCTCCTCCACCAACACGGTCTCCTGCACTGGCACTTCCTTCGTaGAAATTTCTAGCTTTACTC +
Preference number: 4 (lower is better)
Translates to: HPHSRAPHAAPPPTRSPALALPS*KFLALL
Trigger: GAGTAAAGCTAGAAATTTCCACGAAGGAAGTGCCAG...TGCAGGAGACCGTGTTGGTGGAGGAGCGGCGTGTGGTGCACGCGAGTGGGGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637651.1
CDS-3UTR CCA 90 bp AAGCGTCTGCCTTCCAGGCCAGGGAGGACGGCCACATCCTTCTCCAGCTGTGGAGTAAAGGCTGGTTCCTaGGAATATCTCCATTCGGAC +
Preference number: 4 (lower is better)
Translates to: KRLPSRPGRTATSFSSCGVKAGS*EYLHSD
Trigger: GTCCGAATGGAGATATTCCCAGGAACCAGCCTTTAC...TCCACAGCTGGAGAAGGATGTGGCCGTCCTCCCTGGCCTGGAAGGCAGACGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637651.1
CDS-3UTR CCA 90 bp TCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCGCTCCTCAGTGGCAGTaGTCTCCCCGTCGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: STDRYKSVGLEEGTPYRLAPQWQ*SPRRLR
Trigger: CCGCAGCCGACGGGGAGACCACTGCCACTGAGGAGC...GAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000540638.6
ENST00000545076.5
CDS-3UTR TCA 90 bp CATCCCCACTCGCGTGCACCACACGCCGCTCCTCCACCAACACGGTCTCCTGCAATCACAGGTATATTCTaGTCCATCGAGAAGTATCAC +
Preference number: 4 (lower is better)
Translates to: HPHSRAPHAAPPPTRSPAITGIF*SIEKYH
Trigger: GTGATACTTCTCGATGGATCAGAATATACCTGTGAT...TGCAGGAGACCGTGTTGGTGGAGGAGCGGCGTGTGGTGCACGCGAGTGGGGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637651.1
CDS-3UTR TCA 90 bp CGCTCACGGGAAGCAGCGGCTGTCTCTTCCTGTTCCAGGACAGCTTTAGCGACCGAAGACTGCTTAGTCTaGGTGAACAAAGAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: RSREAAAVSSCSRTALATEDCLV*VNKERQ
Trigger: CTGCCTCTCTTTGTTCACTCAGACTAAGCAGTCTTC...GGTCGCTAAAGCTGTCCTGGAACAGGAAGAGACAGCCGCTGCTTCCCGTGAGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637651.1
CDS-3UTR GCA 90 bp TGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACGCAGCGGCGGCGAACTaGTCCAGGGCCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: WTEIFHGQIQVSWVRRGNAAAAN*SRACCC
Trigger: GCAGCAGCAGGCCCTGGAGCAGTTCGCCGCCGCTGC...GTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp AGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCTGGTTTTCCCGGGGTGCTGTGCGCTaGAGCGGCGGCGAACTGCTC +
Preference number: 4 (lower is better)
Translates to: RYKSVGLEEGTPYRLWFSRGAVR*SGGELL
Trigger: GAGCAGTTCGCCGCCGCTGCAGCGCACAGCACCCCG...GGAAAACCAGAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp GAACTCCATATAGGCTCTGGTTTTCCTAACGGTTTGCATGACTGCATTCATGTGCGGGGTGCTGTGCGCTaGAGCGGCGGCGAACTGCTC +
Preference number: 4 (lower is better)
Translates to: ELHIGSGFPNGLHDCIHVRGAVR*SGGELL
Trigger: GAGCAGTTCGCCGCCGCTGCAGCGCACAGCACCCCG...CACATGAATGCAGTCATGCAAACCGTTAGGAAAACCAGAGCCTATATGGAGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp GGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATTCTTCTGGACGCACCGGGGTGCTGTaGGCTGCAGCGGCGGCGAAC +
Preference number: 4 (lower is better)
Translates to: GKISLPVSLLMVKVNSSGRTGVL*AAAAAN
Trigger: GTTCGCCGCCGCTGCAGCGCACAGCACCCCGGTGCG...TCCAGAAGAATTGACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp TGCACTCTGCTCCTCTTGTCGCTCACGGGAAGCAGCGGCTGTCTCTTCCTGTTCGCGTTCAAAGTAAGGTaGTGGGCGATCTATCAACGC +
Preference number: 4 (lower is better)
Translates to: CTLLLLSLTGSSGCLFLFAFKVR*WAIYQR
Trigger: GCGTTGATAGATCGCCCAGCACCTTACTTTGAACGC...GAACAGGAAGAGACAGCCGCTGCTTCCCGTGAGCGACAAGAGGAGCAGAGTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637651.1
CDS-3UTR CCA 90 bp ATTCGGACAGGCTCTTCCTTCGGGGACCAAAGAGGCCCACTTTTAAGACCTCACACTCATCAGCACGCCTaGCTCCAGATCTGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: IRTGSSFGDQRGPLLRPHTHQHA*LQICAW
Trigger: CCAGGCACAGATCTGGAGCCAGGCGTGCTGATGAGT...GTGAGGTCTTAAAAGTGGGCCTCTTTGGTCCCCGAAGGAAGAGCCTGTCCGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637651.1
CDS-3UTR CCA 90 bp TTCCTTCGGGGACCAAAGAGGCCCACTTTTAAGACCTCACTCTCGGGCACTTGCTTCCGCTGTGTCGTCTaGACCTCTGGTCCTCTCTTG +
Preference number: 4 (lower is better)
Translates to: FLRGPKRPTFKTSLSGTCFRCVV*TSGPLL
Trigger: CAAGAGAGGACCAGAGGTCCAGACGACACAGCGGAA...GCAAGTGCCCGAGAGTGAGGTCTTAAAAGTGGGCCTCTTTGGTCCCCGAAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637651.1
3UTR CAA 72 bp ACTTTTAAGACCTCACTCTCGGGCACTTGCTCTGTTTaGCTGAAGCGTCTGCCTTCCAGGCCAGGGAGGACG +
Preference number: 4 (lower is better)
Translates to: TFKTSLSGTCSV*LKRLPSRPGRT
Trigger: CGTCCTCCCTGGCCTGGAAGGCAGACGCTTCAGCAAAACAGAGCAAGTGCCCGAGAGTGAGGTCTTAAAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637651.1
CDS-3UTR TCA 90 bp CGGGGACCAAAGAGGCCCACTTTTAAGACCTCACTCTCGGGCACTTGCTCTGTTTGTGGCCCCAATGAGTaGCACTGGTTACCACTACTC +
Preference number: 4 (lower is better)
Translates to: RGPKRPTFKTSLSGTCSVCGPNE*HWLPLL
Trigger: GAGTAGTGGTAACCAGTGTCACTCATTGGGGCCACA...AACAGAGCAAGTGCCCGAGAGTGAGGTCTTAAAAGTGGGCCTCTTTGGTCCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637651.1
CDS-3UTR GCA 90 bp GAACTCCATATAGGCTCTGGTTTTCCTAACGGTTTGCATGACTGCATTCATGTGTGCTCCAGGGCCTGCTaGTGCTCCTCCTTGGGCGGC +
Preference number: 4 (lower is better)
Translates to: ELHIGSGFPNGLHDCIHVCSRAC*CSSLGG
Trigger: GCCGCCCAAGGAGGAGCAGCAGCAGGCCCTGGAGCA...CACATGAATGCAGTCATGCAAACCGTTAGGAAAACCAGAGCCTATATGGAGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp TCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCAACTGCTCCAGGGCCTaGTGCTGCTCCTCCTTGGGC +
Preference number: 4 (lower is better)
Translates to: STDRYKSVGLEEGTPYRLNCSRA*CCSSLG
Trigger: GCCCAAGGAGGAGCAGCAGCAGGCCCTGGAGCAGTT...GAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp TCTTCTGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGCAGCGGCGGCGAACTaGTCCAGGGCCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: SSGLKFSTDRYKSVGLEEAAAAN*SRACCC
Trigger: GCAGCAGCAGGCCCTGGAGCAGTTCGCCGCCGCTGC...CTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCAGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp TCTTCTGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGCGGGGTGCTGTGCGCTaGAGCGGCGGCGAACTGCTC +
Preference number: 4 (lower is better)
Translates to: SSGLKFSTDRYKSVGLEERGAVR*SGGELL
Trigger: GAGCAGTTCGCCGCCGCTGCAGCGCACAGCACCCCG...CTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCAGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp AAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATCGCACCGGGGTGCTGTaGGCTGCAGCGGCGGCGAAC +
Preference number: 4 (lower is better)
Translates to: KFSTDRYKSVGLEEGTPYRTGVL*AAAAAN
Trigger: GTTCGCCGCCGCTGCAGCGCACAGCACCCCGGTGCG...ATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp GTGTTACATGAGACCACGGTTTATATTGTTGGTTATGAACGTGCAGGTATAGCTCGCACCGGGGTGCTGTaGGCTGCAGCGGCGGCGAAC +
Preference number: 4 (lower is better)
Translates to: VLHETTVYIVGYERAGIARTGVL*AAAAAN
Trigger: GTTCGCCGCCGCTGCAGCGCACAGCACCCCGGTGCG...AGCTATACCTGCACGTTCATAACCAACAATATAAACCGTGGTCTCATGTAACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp GAACTCCATATAGGCTCTGGTTTTCCTAACGGTTTGCATGACTGCATTCATGTGGGTCTCCCCGTCGGCTaGGGTGTCCGTGCGCTCACT +
Preference number: 4 (lower is better)
Translates to: ELHIGSGFPNGLHDCIHVGLPVG*GVRALT
Trigger: AGTGAGCGCACGGACACCGCAGCCGACGGGGAGACC...CACATGAATGCAGTCATGCAAACCGTTAGGAAAACCAGAGCCTATATGGAGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp TCATTGCAAGCCACAGCAGCACTATCACATCTTGGGAACAGGGAGCTGGAAATAGGGGTCTCCCTATGTTaGCCAGGTCGGCCTCGAACC +
Preference number: 4 (lower is better)
Translates to: SLQATAALSHLGNRELEIGVSLC*PGRPRT
Trigger: GGTTCGAGGCCGACCTGGGCAACATAGGGAGACCCC...TATTTCCAGCTCCCTGTTCCCAAGATGTGATAGTGCTGCTGTGGCTTGCAATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637651.1
CDS-3UTR CCA 90 bp TGCACTCTGCTCCTCTTGTCGCTCACGGGAAGCAGCGGCTGTCTCTTCCTGTTCCTTTCCATAAACGCTTaGCAGCTCGATGGTTTGGCA +
Preference number: 4 (lower is better)
Translates to: CTLLLLSLTGSSGCLFLFLSINA*QLDGLA
Trigger: TGCCAAACCATCGAGCTGCCAAGCGTTTATGGAAAG...GAACAGGAAGAGACAGCCGCTGCTTCCCGTGAGCGACAAGAGGAGCAGAGTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637651.1
CDS-3UTR CCA 90 bp TGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACCCGACTCAGTGGCAGTaGTCTCCCCGTCGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: WTEIFHGQIQVSWVRRGNPTQWQ*SPRRLR
Trigger: CCGCAGCCGACGGGGAGACCACTGCCACTGAGTCGG...GTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000544123.5
ENST00000637651.1
CDS-3UTR CCA 90 bp CAATTCTTCTGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAGGGCATCCTCCTGCCTaGCGGCCAGTCGCACGGGGG +
Preference number: 4 (lower is better)
Translates to: QFFWTEIFHGQIQVSWVRGHPPA*RPVARG
Trigger: CCCCCGTGCGACTGGCCGCCAGGCAGGAGGATGCCC...TCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCAGAAGAATTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp GTGTTACATGAGACCACGGTTTATATTGTTGGTTATGAACGTGCAGGTATAGCTGGGCATCCTCCTGCCTaGCGGCCAGTCGCACGGGGG +
Preference number: 4 (lower is better)
Translates to: VLHETTVYIVGYERAGIAGHPPA*RPVARG
Trigger: CCCCCGTGCGACTGGCCGCCAGGCAGGAGGATGCCC...AGCTATACCTGCACGTTCATAACCAACAATATAAACCGTGGTCTCATGTAACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR TCA 90 bp AGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCTGGTTTTCCCCTGTTCCTTGTCAGTaGCCTCCCTCCGCACCGGGG +
Preference number: 4 (lower is better)
Translates to: RYKSVGLEEGTPYRLWFSPVPCQ*PPSAPG
Trigger: CCCCGGTGCGGAGGGAGGTCACTGACAAGGAACAGG...GGAAAACCAGAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR TCA 90 bp TGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACCCTGTTCCTTGTCAGTaGCCTCCCTCCGCACCGGGG +
Preference number: 4 (lower is better)
Translates to: WTEIFHGQIQVSWVRRGNPVPCQ*PPSAPG
Trigger: CCCCGGTGCGGAGGGAGGTCACTGACAAGGAACAGG...GTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR TCA 90 bp GACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCTGGTTTGAGACTCGGCCTCCTTaGTGGGGGCCAGGGATTCGG +
Preference number: 4 (lower is better)
Translates to: DRYKSVGLEEGTPYRLWFETRPP*WGPGIR
Trigger: CCGAATCCCTGGCCCCCATCAAGGAGGCCGAGTCTC...AAACCAGAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400111.8
ENST00000637651.1
CDS-3UTR GCA 90 bp GGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATTCTTCTGGAAAGCCAACCTCGTCCTaGCTGCCCTCCCAGCCGCGG +
Preference number: 4 (lower is better)
Translates to: GKISLPVSLLMVKVNSSGKPTSS*LPSQPR
Trigger: CCGCGGCTGGGAGGGCAGGCAGGACGAGGTTGGCTT...TCCAGAAGAATTGACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342933.7
ENST00000540638.6
CDS-3UTR GCA 90 bp CAATTCTTCTGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAGCAGCGGCGGCGAACTaGTCCAGGGCCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: QFFWTEIFHGQIQVSWVRAAAAN*SRACCC
Trigger: GCAGCAGCAGGCCCTGGAGCAGTTCGCCGCCGCTGC...TCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCAGAAGAATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp CAAAGCAAGATTGGAAGCATTACATATTTCCAGAGGGTCAGAGAGTCATTACTGCGGGGTGCTGTGCGCTaGAGCGGCGGCGAACTGCTC +
Preference number: 4 (lower is better)
Translates to: QSKIGSITYFQRVRESLLRGAVR*SGGELL
Trigger: GAGCAGTTCGCCGCCGCTGCAGCGCACAGCACCCCG...CAGTAATGACTCTCTGACCCTCTGGAAATATGTAATGCTTCCAATCTTGCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000544123.5
ENST00000637651.1
CDS-3UTR GCA 90 bp GTATATTCTGATCCATCGAGAAGTATCACTTTGCACTGCATGCTTTTAGGCTTTCGCACCGGGGTGCTGTaGGCTGCAGCGGCGGCGAAC +
Preference number: 4 (lower is better)
Translates to: VYSDPSRSITLHCMLLGFRTGVL*AAAAAN
Trigger: GTTCGCCGCCGCTGCAGCGCACAGCACCCCGGTGCG...AAAGCCTAAAAGCATGCAGTGCAAAGTGATACTTCTCGATGGATCAGAATATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580866.2
CDS-3UTR GCA 90 bp ATTCGGACAGGCTCTTCCTTCGGGGACCAAAGAGGCCCACTTTTAAGACCTCACCTGGCTCTTCTCGTTTaGGCTTGTGTCCTGCCACTA +
Preference number: 4 (lower is better)
Translates to: IRTGSSFGDQRGPLLRPHLALLV*ACVLPL
Trigger: TAGTGGCAGGACACAAGCGCAAACGAGAAGAGCCAG...GTGAGGTCTTAAAAGTGGGCCTCTTTGGTCCCCGAAGGAAGAGCCTGTCCGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637651.1
CDS-3UTR GCA 90 bp TCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCTCAGTCTTTCCCTCGTaGCGGATGGCCGAGATGGGC +
Preference number: 4 (lower is better)
Translates to: STDRYKSVGLEEGTPYRLSVFPS*RMAEMG
Trigger: GCCCATCTCGGCCATCCGGCACGAGGGAAAGACTGA...GAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp TCATTGCAAGCCACAGCAGCACTATCACATCTTGGGAACAGGGAGCTGGAAATACGGCTGCGGTGTCCGTaGGCTCACTGTCAGTCTTTC +
Preference number: 4 (lower is better)
Translates to: SLQATAALSHLGNRELEIRLRCP*AHCQSF
Trigger: GAAAGACTGACAGTGAGCGCACGGACACCGCAGCCG...TATTTCCAGCTCCCTGTTCCCAAGATGTGATAGTGCTGCTGTGGCTTGCAATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637651.1
CDS-3UTR GCA 90 bp TCTTCTGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGTCTCCCCGTCGGCTaGGGTGTCCGTGCGCTCACT +
Preference number: 4 (lower is better)
Translates to: SSGLKFSTDRYKSVGLEEGLPVG*GVRALT
Trigger: AGTGAGCGCACGGACACCGCAGCCGACGGGGAGACC...CTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCAGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp TCTTCTGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGATGGGGGCATCCTCCTaGCTGGCGGCCAGTCGCACG +
Preference number: 4 (lower is better)
Translates to: SSGLKFSTDRYKSVGLEEMGASS*LAASRT
Trigger: CGTGCGACTGGCCGCCAGGCAGGAGGATGCCCCCAT...CTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCAGAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp TCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCCTAAGCGGCAGGTGGTaGACGGTGGGTTCCGTCTCT +
Preference number: 4 (lower is better)
Translates to: STDRYKSVGLEEGTPYRLLSGRW*TVGSVS
Trigger: AGAGACGGAACCCACCGTGCACCACCTGCCGCTTAG...GAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp TCTTCTGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGCATCCCCACTCGCGTaGACCACACGCCGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: SSGLKFSTDRYKSVGLEEASPLA*TTRRSS
Trigger: GGAGGAGCGGCGTGTGGTGCACGCGAGTGGGGATGC...CTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCAGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp GGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATTCTTCTGGAGCATCCCCACTCGCGTaGACCACACGCCGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: GKISLPVSLLMVKVNSSGASPLA*TTRRSS
Trigger: GGAGGAGCGGCGTGTGGTGCACGCGAGTGGGGATGC...TCCAGAAGAATTGACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp GAACTCCATATAGGCTCTGGTTTTCCTAACGGTTTGCATGACTGCATTCATGTGGCGGCACCTCCAAGTTaGCACCTGCAGCGCGCTTCG +
Preference number: 4 (lower is better)
Translates to: ELHIGSGFPNGLHDCIHVAAPPS*HLQRAS
Trigger: CGAAGCGCGCTGCAGGTGGCAACTTGGAGGTGCCGC...CACATGAATGCAGTCATGCAAACCGTTAGGAAAACCAGAGCCTATATGGAGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637651.1
CDS-3UTR GCA 90 bp AAGCGTCTGCCTTCCAGGCCAGGGAGGACGGCCACATCCTTCTCCAGCTGTGGAATGCTGACTTTGCACTaGGGTATTGATTTAACCATG +
Preference number: 4 (lower is better)
Translates to: KRLPSRPGRTATSFSSCGMLTLH*GIDLTM
Trigger: CATGGTTAAATCAATACCGCAGTGCAAAGTCAGCAT...TCCACAGCTGGAGAAGGATGTGGCCGTCCTCCCTGGCCTGGAAGGCAGACGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637651.1
CDS-3UTR CCA 90 bp GAACTCCATATAGGCTCTGGTTTTCCTAACGGTTTGCATGACTGCATTCATGTGTGGGGCTCGGCCTCCTaGTCCGGCTTGGATTCCGAG +
Preference number: 4 (lower is better)
Translates to: ELHIGSGFPNGLHDCIHVWGSAS*SGLDSE
Trigger: CTCGGAATCCAAGCCGGACCAGGAGGCCGAGCCCCA...CACATGAATGCAGTCATGCAAACCGTTAGGAAAACCAGAGCCTATATGGAGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp GACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCTGGTTTTGGGGCTCGGCCTCCTaGTCCGGCTTGGATTCCGAG +
Preference number: 4 (lower is better)
Translates to: DRYKSVGLEEGTPYRLWFWGSAS*SGLDSE
Trigger: CTCGGAATCCAAGCCGGACCAGGAGGCCGAGCCCCA...AAACCAGAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp TGGTGCACGGTGGGTTCCGTCTCTATTCCACTGGACTCCGTCTTGGTTTCCATTGCTCCCACATTCATCTaGGTCATAGTCTCCGAGCTC +
Preference number: 4 (lower is better)
Translates to: WCTVGSVSIPLDSVLVSIAPTFI*VIVSEL
Trigger: GAGCTCGGAGACTATGACCCAGATGAATGTGGGAGC...AATGGAAACCAAGACGGAGTCCAGTGGAATAGAGACGGAACCCACCGTGCACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637651.1
CDS-3UTR CCA 90 bp AGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCTGGTTTTCCCCTGGTCCGACTCAGTaGCAGTGGTCTCCCCGTCGG +
Preference number: 4 (lower is better)
Translates to: RYKSVGLEEGTPYRLWFSPGPTQ*QWSPRR
Trigger: CCGACGGGGAGACCACTGCCACTGAGTCGGACCAGG...GGAAAACCAGAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000544123.5
ENST00000637651.1
CDS-3UTR CCA 90 bp GGATGGCTGCACTCTGCTCCTCTTGTCGCTCACGGGAAGCAGCGGCTGTCTCTTGCTAAGTTATTCCTCTaGTCAATCCTCTCCATCTTC +
Preference number: 4 (lower is better)
Translates to: GWLHSAPLVAHGKQRLSLAKLFL*SILSIF
Trigger: GAAGATGGAGAGGATTGACCAGAGGAATAACTTAGC...AAGAGACAGCCGCTGCTTCCCGTGAGCGACAAGAGGAGCAGAGTGCAGCCATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637651.1
CDS-3UTR CCA 90 bp GGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATTCTTCTGGAAGAGCTCCTGGAGGCTaGAAGGGGCCGCCAGACCCG +
Preference number: 4 (lower is better)
Translates to: GKISLPVSLLMVKVNSSGRAPGG*KGPPDP
Trigger: CGGGTCTGGCGGCCCCTTCCAGCCTCCAGGAGCTCT...TCCAGAAGAATTGACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637651.1
3UTR CAA 72 bp AATTTCCGCTGTGTCGTCTGGACCTCTGGTCCTCTCTaGGATTTCTCATCAGCGAGGGTTTCCAGGACCTCA +
Preference number: 4 (lower is better)
Translates to: NFRCVVWTSGPL*DFSSARVSRTS
Trigger: TGAGGTCCTGGAAACCCTCGCTGATGAGAAATCCAAGAGAGGACCAGAGGTCCAGACGACACAGCGGAAATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637651.1
CDS-3UTR TCA 90 bp GAACTCCATATAGGCTCTGGTTTTCCTAACGGTTTGCATGACTGCATTCATGTGTGGCCGAGATGGGCGTaGCTTCTTCCCCCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: ELHIGSGFPNGLHDCIHVWPRWA*LLPPSS
Trigger: GGAGGAAGGGGGAAGAAGTCACGCCCATCTCGGCCA...CACATGAATGCAGTCATGCAAACCGTTAGGAAAACCAGAGCCTATATGGAGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR TCA 90 bp TGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTGGCCGAGATGGGCGTaGCTTCTTCCCCCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: WTEIFHGQIQVSWVRRGNWPRWA*LLPPSS
Trigger: GGAGGAAGGGGGAAGAAGTCACGCCCATCTCGGCCA...GTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR TCA 90 bp TCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCGCCTCTTTAATTGCCTaGGCCAGCGCCTGGTCATGG +
Preference number: 4 (lower is better)
Translates to: STDRYKSVGLEEGTPYRLASLIA*ASAWSW
Trigger: CCATGACCAGGCGCTGGCTCAGGCAATTAAAGAGGC...GAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000545076.5
ENST00000637651.1
CDS-3UTR TCA 90 bp GGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATTCTTCTGGAGAGACTCGGCCTCCTTaGTGGGGGCCAGGGATTCGG +
Preference number: 4 (lower is better)
Translates to: GKISLPVSLLMVKVNSSGETRPP*WGPGIR
Trigger: CCGAATCCCTGGCCCCCATCAAGGAGGCCGAGTCTC...TCCAGAAGAATTGACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400111.8
ENST00000637651.1
CDS-3UTR GCA 90 bp GTGTTACATGAGACCACGGTTTATATTGTTGGTTATGAACGTGCAGGTATAGCTAAGCCAACCTCGTCCTaGCTGCCCTCCCAGCCGCGG +
Preference number: 4 (lower is better)
Translates to: VLHETTVYIVGYERAGIAKPTSS*LPSQPR
Trigger: CCGCGGCTGGGAGGGCAGGCAGGACGAGGTTGGCTT...AGCTATACCTGCACGTTCATAACCAACAATATAAACCGTGGTCTCATGTAACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342933.7
ENST00000540638.6
CDS-3UTR GCA 90 bp CGTTGCTTCATGCATTATCGGTTTAGTGATGCTGAATCAGATTGCTTTATTATGCGTCCTCGGCGGCGGTaGGCAGGAGACTCGGGCGTG +
Preference number: 4 (lower is better)
Translates to: RCFMHYRFSDAESDCFIMRPRRR*AGDSGV
Trigger: CACGCCCGAGTCTCCTGCGCACCGCCGCCGAGGACG...CATAATAAAGCAATCTGATTCAGCATCACTAAACCGATAATGCATGAAGCAACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342933.7
ENST00000540638.6
CDS-3UTR GCA 90 bp CAATTCTTCTGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGATGCTCCAGGGCCTGCTaGTGCTCCTCCTTGGGCGGC +
Preference number: 4 (lower is better)
Translates to: QFFWTEIFHGQIQVSWVRCSRAC*CSSLGG
Trigger: GCCGCCCAAGGAGGAGCAGCAGCAGGCCCTGGAGCA...TCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCAGAAGAATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp GACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCTGGTTTAACTGCTCCAGGGCCTaGTGCTGCTCCTCCTTGGGC +
Preference number: 4 (lower is better)
Translates to: DRYKSVGLEEGTPYRLWFNCSRA*CCSSLG
Trigger: GCCCAAGGAGGAGCAGCAGCAGGCCCTGGAGCAGTT...AAACCAGAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp GAACTCCATATAGGCTCTGGTTTTCCTAACGGTTTGCATGACTGCATTCATGTGAACTGCTCCAGGGCCTaGTGCTGCTCCTCCTTGGGC +
Preference number: 4 (lower is better)
Translates to: ELHIGSGFPNGLHDCIHVNCSRA*CCSSLG
Trigger: GCCCAAGGAGGAGCAGCAGCAGGCCCTGGAGCAGTT...CACATGAATGCAGTCATGCAAACCGTTAGGAAAACCAGAGCCTATATGGAGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp TGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACAACTGCTCCAGGGCCTaGTGCTGCTCCTCCTTGGGC +
Preference number: 4 (lower is better)
Translates to: WTEIFHGQIQVSWVRRGNNCSRA*CCSSLG
Trigger: GCCCAAGGAGGAGCAGCAGCAGGCCCTGGAGCAGTT...GTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp AGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCTGGTTTTCCAACTGCTCCAGGGCCTaGTGCTGCTCCTCCTTGGGC +
Preference number: 4 (lower is better)
Translates to: RYKSVGLEEGTPYRLWFSNCSRA*CCSSLG
Trigger: GCCCAAGGAGGAGCAGCAGCAGGCCCTGGAGCAGTT...GGAAAACCAGAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp TTGCTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCGCAGCGGCGGCGAACTaGTCCAGGGCCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: LLYYGKISLPVSLLMVKVAAAAN*SRACCC
Trigger: GCAGCAGCAGGCCCTGGAGCAGTTCGCCGCCGCTGC...GACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp CCTATGAATTCTGTTGGTTTTCGCGCAGACTCTAATAAACTGAAGATTTCAGAGGCAGCGGCGGCGAACTaGTCCAGGGCCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: PMNSVGFRADSNKLKISEAAAAN*SRACCC
Trigger: GCAGCAGCAGGCCCTGGAGCAGTTCGCCGCCGCTGC...CTCTGAAATCTTCAGTTTATTAGAGTCTGCGCGAAAACCAACAGAATTCATAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637651.1
CDS-3UTR GCA 90 bp TTGCTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCCGGGGTGCTGTGCGCTaGAGCGGCGGCGAACTGCTC +
Preference number: 4 (lower is better)
Translates to: LLYYGKISLPVSLLMVKVRGAVR*SGGELL
Trigger: GAGCAGTTCGCCGCCGCTGCAGCGCACAGCACCCCG...GACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp GTTGCTTCATGCATTATCGGTTTAGTGATGCTGAATCAGATTGCTTTATTATGGCGCACCGGGGTGCTGTaGGCTGCAGCGGCGGCGAAC +
Preference number: 4 (lower is better)
Translates to: VASCIIGLVMLNQIALLWRTGVL*AAAAAN
Trigger: GTTCGCCGCCGCTGCAGCGCACAGCACCCCGGTGCG...CCATAATAAAGCAATCTGATTCAGCATCACTAAACCGATAATGCATGAAGCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp TTCCTTCGGGGACCAAAGAGGCCCACTTTTAAGACCTCACTCTCGGGCACTTGCGCCAGTACCAACCTCTaGAGCAGACATAGAATCCTT +
Preference number: 4 (lower is better)
Translates to: FLRGPKRPTFKTSLSGTCASTNL*SRHRIL
Trigger: AAGGATTCTATGTCTGCTGCAGAGGTTGGTACTGGC...GCAAGTGCCCGAGAGTGAGGTCTTAAAAGTGGGCCTCTTTGGTCCCCGAAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637651.1
CDS-3UTR GCA 90 bp AAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATGGTCTCCCCGTCGGCTaGGGTGTCCGTGCGCTCACT +
Preference number: 4 (lower is better)
Translates to: KFSTDRYKSVGLEEGTPYGLPVG*GVRALT
Trigger: AGTGAGCGCACGGACACCGCAGCCGACGGGGAGACC...ATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp CAATTCTTCTGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAGGTCTCCCCGTCGGCTaGGGTGTCCGTGCGCTCACT +
Preference number: 4 (lower is better)
Translates to: QFFWTEIFHGQIQVSWVRGLPVG*GVRALT
Trigger: AGTGAGCGCACGGACACCGCAGCCGACGGGGAGACC...TCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCAGAAGAATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp AAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATATGGGGGCATCCTCCTaGCTGGCGGCCAGTCGCACG +
Preference number: 4 (lower is better)
Translates to: KFSTDRYKSVGLEEGTPYMGASS*LAASRT
Trigger: CGTGCGACTGGCCGCCAGGCAGGAGGATGCCCCCAT...ATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp AAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATGCATCCCCACTCGCGTaGACCACACGCCGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: KFSTDRYKSVGLEEGTPYASPLA*TTRRSS
Trigger: GGAGGAGCGGCGTGTGGTGCACGCGAGTGGGGATGC...ATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp GTGTTACATGAGACCACGGTTTATATTGTTGGTTATGAACGTGCAGGTATAGCTGCATCCCCACTCGCGTaGACCACACGCCGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: VLHETTVYIVGYERAGIAASPLA*TTRRSS
Trigger: GGAGGAGCGGCGTGTGGTGCACGCGAGTGGGGATGC...AGCTATACCTGCACGTTCATAACCAACAATATAAACCGTGGTCTCATGTAACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp AGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCTGGTTTTCCGAATGCGGGCTGTGCTaGAGCATCCCCGCTGTCTCC +
Preference number: 4 (lower is better)
Translates to: RYKSVGLEEGTPYRLWFSECGLC*SIPAVS
Trigger: GGAGACAGCGGGGATGCTGCAGCACAGCCCGCATTC...GGAAAACCAGAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp CCTATGAATTCTGTTGGTTTTCGCGCAGACTCTAATAAACTGAAGATTTCAGAGGGCTCCTCCCGCAGCTaGGGTGGCGGCACCTCCAAG +
Preference number: 4 (lower is better)
Translates to: PMNSVGFRADSNKLKISEGSSRS*GGGTSK
Trigger: CTTGGAGGTGCCGCCACCGCAGCTGCGGGAGGAGCC...CTCTGAAATCTTCAGTTTATTAGAGTCTGCGCGAAAACCAACAGAATTCATAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637651.1
CDS-3UTR CCA 90 bp TCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCCCTCCTGGTCCGGCTTaGATTCCGAGTCTGATCCAG +
Preference number: 4 (lower is better)
Translates to: STDRYKSVGLEEGTPYRLPPGPA*IPSLIQ
Trigger: CTGGATCAGACTCGGAATCCAAGCCGGACCAGGAGG...GAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
CDS-3UTR CCA 90 bp CGGGGACCAAAGAGGCCCACTTTTAAGACCTCACTCTCGGGCACTTGCTCTGTTGATCTATCAACGCACTaGCTCTTCTCGTTTGCGCTT +
Preference number: 4 (lower is better)
Translates to: RGPKRPTFKTSLSGTCSVDLSTH*LFSFAL
Trigger: AAGCGCAAACGAGAAGAGCCAGTGCGTTGATAGATC...AACAGAGCAAGTGCCCGAGAGTGAGGTCTTAAAAGTGGGCCTCTTTGGTCCCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637651.1
CDS-3UTR CCA 90 bp CAATTCTTCTGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGACCGACTCAGTGGCAGTaGTCTCCCCGTCGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: QFFWTEIFHGQIQVSWVRPTQWQ*SPRRLR
Trigger: CCGCAGCCGACGGGGAGACCACTGCCACTGAGTCGG...TCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCAGAAGAATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000544123.5
ENST00000637651.1
CDS-3UTR CCA 90 bp TCTTCTGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGCCTGGTCCGACTCAGTaGCAGTGGTCTCCCCGTCGG +
Preference number: 4 (lower is better)
Translates to: SSGLKFSTDRYKSVGLEEPGPTQ*QWSPRR
Trigger: CCGACGGGGAGACCACTGCCACTGAGTCGGACCAGG...CTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCAGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000544123.5
ENST00000637651.1
CDS-3UTR CCA 90 bp TCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATTCTTCTGGACTGAAATTTTCGGGCATCCTCCTGCCTaGCGGCCAGTCGCACGGGGG +
Preference number: 4 (lower is better)
Translates to: SASVFINGQGQFFWTEIFGHPPA*RPVARG
Trigger: CCCCCGTGCGACTGGCCGCCAGGCAGGAGGATGCCC...GAAAATTTCAGTCCAGAAGAATTGACCTTGACCATTAATAAAGACACTGGCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp ATTGCTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTGGGCATCCTCCTGCCTaGCGGCCAGTCGCACGGGGG +
Preference number: 4 (lower is better)
Translates to: IALLWEDLSASVFINGQGGHPPA*RPVARG
Trigger: CCCCCGTGCGACTGGCCGCCAGGCAGGAGGATGCCC...ACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAGCAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp CGTTGCTTCATGCATTATCGGTTTAGTGATGCTGAATCAGATTGCTTTATTATGGGGCATCCTCCTGCCTaGCGGCCAGTCGCACGGGGG +
Preference number: 4 (lower is better)
Translates to: RCFMHYRFSDAESDCFIMGHPPA*RPVARG
Trigger: CCCCCGTGCGACTGGCCGCCAGGCAGGAGGATGCCC...CATAATAAAGCAATCTGATTCAGCATCACTAAACCGATAATGCATGAAGCAACG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp CTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATGGGCATCCTCCTGCCTaGCGGCCAGTCGCACGGGGG +
Preference number: 4 (lower is better)
Translates to: LYYGKISLPVSLLMVKVNGHPPA*RPVARG
Trigger: CCCCCGTGCGACTGGCCGCCAGGCAGGAGGATGCCC...ATTGACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp GAACTCCATATAGGCTCTGGTTTTCCTAACGGTTTGCATGACTGCATTCATGTGGTGCTAAGCGGCAGGTaGTGCACGGTGGGTTCCGTC +
Preference number: 4 (lower is better)
Translates to: ELHIGSGFPNGLHDCIHVVLSGR*CTVGSV
Trigger: GACGGAACCCACCGTGCACCACCTGCCGCTTAGCAC...CACATGAATGCAGTCATGCAAACCGTTAGGAAAACCAGAGCCTATATGGAGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp AAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATGCGGGAAAGAGCTCCTaGAGGCTGGAAGGGGCCGCC +
Preference number: 4 (lower is better)
Translates to: KFSTDRYKSVGLEEGTPYAGKSS*RLEGAA
Trigger: GGCGGCCCCTTCCAGCCTCCAGGAGCTCTTTCCCGC...ATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637651.1
CDS-3UTR CCA 90 bp AGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCTGGTTTTCCACCGAAGCCTTCCTTTaGGGCCCCTCCCGGAGCTTG +
Preference number: 4 (lower is better)
Translates to: RYKSVGLEEGTPYRLWFSTEAFL*GPSRSL
Trigger: CAAGCTCCGGGAGGGGCCCCAAAGGAAGGCTTCGGT...GGAAAACCAGAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637651.1
CDS-3UTR TCA 90 bp GTGTTACATGAGACCACGGTTTATATTGTTGGTTATGAACGTGCAGGTATAGCTCCTGTTCCTTGTCAGTaGCCTCCCTCCGCACCGGGG +
Preference number: 4 (lower is better)
Translates to: VLHETTVYIVGYERAGIAPVPCQ*PPSAPG
Trigger: CCCCGGTGCGGAGGGAGGTCACTGACAAGGAACAGG...AGCTATACCTGCACGTTCATAACCAACAATATAAACCGTGGTCTCATGTAACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR TCA 90 bp TCTTCTGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGTGGCCGAGATGGGCGTaGCTTCTTCCCCCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: SSGLKFSTDRYKSVGLEEWPRWA*LLPPSS
Trigger: GGAGGAAGGGGGAAGAAGTCACGCCCATCTCGGCCA...CTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCAGAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp TTCAGTGCATTTGCCATTTTTATTTCGCTATGCAGAAACATACATTCACCATGGCAACCTCGTCCTGCCTaGCCTCCCAGCCGCGGGGGA +
Preference number: 4 (lower is better)
Translates to: FSAFAIFISLCRNIHSPWQPRPA*PPSRGG
Trigger: TCCCCCGCGGCTGGGAGGGCAGGCAGGACGAGGTTG...CCATGGTGAATGTATGTTTCTGCATAGCGAAATAAAAATGGCAAATGCACTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000342933.7
CDS-3UTR GCA 90 bp CTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATCAACCTCGTCCTGCCTaGCCTCCCAGCCGCGGGGGA +
Preference number: 4 (lower is better)
Translates to: LYYGKISLPVSLLMVKVNQPRPA*PPSRGG
Trigger: TCCCCCGCGGCTGGGAGGGCAGGCAGGACGAGGTTG...ATTGACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342933.7
ENST00000540638.6
CDS-3UTR GCA 90 bp TTGCTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCTGCTCCAGGGCCTGCTaGTGCTCCTCCTTGGGCGGC +
Preference number: 4 (lower is better)
Translates to: LLYYGKISLPVSLLMVKVCSRAC*CSSLGG
Trigger: GCCGCCCAAGGAGGAGCAGCAGCAGGCCCTGGAGCA...GACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp GTTGCTTCATGCATTATCGGTTTAGTGATGCTGAATCAGATTGCTTTATTATGGCGGGGTGCTGTGCGCTaGAGCGGCGGCGAACTGCTC +
Preference number: 4 (lower is better)
Translates to: VASCIIGLVMLNQIALLWRGAVR*SGGELL
Trigger: GAGCAGTTCGCCGCCGCTGCAGCGCACAGCACCCCG...CCATAATAAAGCAATCTGATTCAGCATCACTAAACCGATAATGCATGAAGCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp GACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCTGGTTTTCAGTCTTTCCCTCGTaGCGGATGGCCGAGATGGGC +
Preference number: 4 (lower is better)
Translates to: DRYKSVGLEEGTPYRLWFSVFPS*RMAEMG
Trigger: GCCCATCTCGGCCATCCGGCACGAGGGAAAGACTGA...AAACCAGAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp TGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCAGTCTTTCCCTCGTaGCGGATGGCCGAGATGGGC +
Preference number: 4 (lower is better)
Translates to: WTEIFHGQIQVSWVRRGNSVFPS*RMAEMG
Trigger: GCCCATCTCGGCCATCCGGCACGAGGGAAAGACTGA...GTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp AGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCTGGTTTTCCCGGCTGCGGTGTCCGTaGGCTCACTGTCAGTCTTTC +
Preference number: 4 (lower is better)
Translates to: RYKSVGLEEGTPYRLWFSRLRCP*AHCQSF
Trigger: GAAAGACTGACAGTGAGCGCACGGACACCGCAGCCG...GGAAAACCAGAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp GACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCTGGTTTCTAAGCGGCAGGTGGTaGACGGTGGGTTCCGTCTCT +
Preference number: 4 (lower is better)
Translates to: DRYKSVGLEEGTPYRLWFLSGRW*TVGSVS
Trigger: AGAGACGGAACCCACCGTGCACCACCTGCCGCTTAG...AAACCAGAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp GAACTCCATATAGGCTCTGGTTTTCCTAACGGTTTGCATGACTGCATTCATGTGTGTGAATGCGGGCTGTaGTGCAGCATCCCCGCTGTC +
Preference number: 4 (lower is better)
Translates to: ELHIGSGFPNGLHDCIHVCECGL*CSIPAV
Trigger: GACAGCGGGGATGCTGCAGCACAGCCCGCATTCACA...CACATGAATGCAGTCATGCAAACCGTTAGGAAAACCAGAGCCTATATGGAGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp AGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCTGGTTTTCCTCTTCTTCAGGACTCTaGCGGCGAGACTCGGCCTCC +
Preference number: 4 (lower is better)
Translates to: RYKSVGLEEGTPYRLWFSSSSGL*RRDSAS
Trigger: GGAGGCCGAGTCTCGCCGGCAGAGTCCTGAAGAAGA...GGAAAACCAGAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400111.8
ENST00000637651.1
CDS-3UTR GCA 90 bp TGCACTCTGCTCCTCTTGTCGCTCACGGGAAGCAGCGGCTGTCTCTTCCTGTTCGCAGAGTCTCCTTCCTaGATTTTCTTTATCACACTT +
Preference number: 4 (lower is better)
Translates to: CTLLLLSLTGSSGCLFLFAESPS*IFFITL
Trigger: AAGTGTGATAAAGAAAATGCAGGAAGGAGACTCTGC...GAACAGGAAGAGACAGCCGCTGCTTCCCGTGAGCGACAAGAGGAGCAGAGTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637651.1
CDS-3UTR CCA 90 bp TCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATTCTTCTGGACTGAAATTTTCCAGCCTCCTCCGTCCTaGCGCAGGGTCAGGCTCCGC +
Preference number: 4 (lower is better)
Translates to: SASVFINGQGQFFWTEIFQPPPS*RRVRLR
Trigger: GCGGAGCCTGACCCTGCGCCAGGACGGAGGAGGCTG...GAAAATTTCAGTCCAGAAGAATTGACCTTGACCATTAATAAAGACACTGGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342933.7
ENST00000540638.6
CDS-3UTR CCA 90 bp CGTTGCTTCATGCATTATCGGTTTAGTGATGCTGAATCAGATTGCTTTATTATGCAGCCTCCTCCGTCCTaGCGCAGGGTCAGGCTCCGC +
Preference number: 4 (lower is better)
Translates to: RCFMHYRFSDAESDCFIMQPPPS*RRVRLR
Trigger: GCGGAGCCTGACCCTGCGCCAGGACGGAGGAGGCTG...CATAATAAAGCAATCTGATTCAGCATCACTAAACCGATAATGCATGAAGCAACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342933.7
ENST00000540638.6
CDS-3UTR CCA 90 bp TTGCTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCCAGGAGACTCGGGCGTaGGGAGGAAGCCGCAGCCCA +
Preference number: 4 (lower is better)
Translates to: LLYYGKISLPVSLLMVKVQETRA*GGSRSP
Trigger: TGGGCTGCGGCTTCCTCCCCACGCCCGAGTCTCCTG...GACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342933.7
ENST00000540638.6
CDS-3UTR CCA 90 bp CAAAGCAAGATTGGAAGCATTACATATTTCCAGAGGGTCAGAGAGTCATTACTGTGGGGCTCGGCCTCCTaGTCCGGCTTGGATTCCGAG +
Preference number: 4 (lower is better)
Translates to: QSKIGSITYFQRVRESLLWGSAS*SGLDSE
Trigger: CTCGGAATCCAAGCCGGACCAGGAGGCCGAGCCCCA...CAGTAATGACTCTCTGACCCTCTGGAAATATGTAATGCTTCCAATCTTGCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000544123.5
ENST00000637651.1
CDS-3UTR CCA 90 bp TCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCGGCGTCATTCCTCTGTaGCTCTTGTGCAGCTCGATC +
Preference number: 4 (lower is better)
Translates to: STDRYKSVGLEEGTPYRLGVIPL*LLCSSI
Trigger: GATCGAGCTGCACAAGAGCCACAGAGGAATGACGCC...GAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp AAAGCAAGATTGGAAGCATTACATATTTCCAGAGGGTCAGAGAGTCATTACTGTCCGACTCAGTGGCAGTaGTCTCCCCGTCGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: KARLEALHISRGSESHYCPTQWQ*SPRRLR
Trigger: CCGCAGCCGACGGGGAGACCACTGCCACTGAGTCGG...ACAGTAATGACTCTCTGACCCTCTGGAAATATGTAATGCTTCCAATCTTGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000544123.5
ENST00000637651.1
CDS-3UTR CCA 90 bp AGCAAGATTGGAAGCATTACATATTTCCAGAGGGTCAGAGAGTCATTACTGTTTCCGACTCAGTGGCAGTaGTCTCCCCGTCGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: SKIGSITYFQRVRESLLFPTQWQ*SPRRLR
Trigger: CCGCAGCCGACGGGGAGACCACTGCCACTGAGTCGG...AAACAGTAATGACTCTCTGACCCTCTGGAAATATGTAATGCTTCCAATCTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000544123.5
ENST00000637651.1
CDS-3UTR CCA 90 bp TCCTCTCCATCTTCTGGTGTGATCTCTGTCTCTTTATGGACCACTACTTTGGTCGTCGCACGGGGGAGGTaGAAAGCCTCTTCTCCCATT +
Preference number: 4 (lower is better)
Translates to: SSPSSGVISVSLWTTTLVVARGR*KASSPI
Trigger: AATGGGAGAAGAGGCTTTCCACCTCCCCCGTGCGAC...GACCAAAGTAGTGGTCCATAAAGAGACAGAGATCACACCAGAAGATGGAGAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637651.1
CDS-3UTR CCA 90 bp TCCTCTCCATCTTCTGGTGTGATCTCTGTCTCTTTATGGACCACTACTTTGGTCCAAGTGGTTCGATCATaGGGGCATCCTCCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: SSPSSGVISVSLWTTTLVQVVRS*GHPPAW
Trigger: CCAGGCAGGAGGATGCCCCCATGATCGAACCACTTG...GACCAAAGTAGTGGTCCATAAAGAGACAGAGATCACACCAGAAGATGGAGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637651.1
CDS-3UTR CCA 90 bp GGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATTCTTCTGGAGTGCTAAGCGGCAGGTaGTGCACGGTGGGTTCCGTC +
Preference number: 4 (lower is better)
Translates to: GKISLPVSLLMVKVNSSGVLSGR*CTVGSV
Trigger: GACGGAACCCACCGTGCACCACCTGCCGCTTAGCAC...TCCAGAAGAATTGACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR TCA 90 bp AAAGCAAGATTGGAAGCATTACATATTTCCAGAGGGTCAGAGAGTCATTACTGTCCTGTTCCTTGTCAGTaGCCTCCCTCCGCACCGGGG +
Preference number: 4 (lower is better)
Translates to: KARLEALHISRGSESHYCPVPCQ*PPSAPG
Trigger: CCCCGGTGCGGAGGGAGGTCACTGACAAGGAACAGG...ACAGTAATGACTCTCTGACCCTCTGGAAATATGTAATGCTTCCAATCTTGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000544123.5
ENST00000637651.1
CDS-3UTR TCA 90 bp TCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCCCGGAGTCACAGTGGTaGTCAAGTTGGTCTGAGAGA +
Preference number: 4 (lower is better)
Translates to: STDRYKSVGLEEGTPYRLPESQW*SSWSER
Trigger: TCTCTCAGACCAACTTGATCACCACTGTGACTCCGG...GAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR TCA 90 bp CAATTCTTCTGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGATGGCCGAGATGGGCGTaGCTTCTTCCCCCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: QFFWTEIFHGQIQVSWVRWPRWA*LLPPSS
Trigger: GGAGGAAGGGGGAAGAAGTCACGCCCATCTCGGCCA...TCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCAGAAGAATTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR TCA 90 bp TGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACGCCTCTTTAATTGCCTaGGCCAGCGCCTGGTCATGG +
Preference number: 4 (lower is better)
Translates to: WTEIFHGQIQVSWVRRGNASLIA*ASAWSW
Trigger: CCATGACCAGGCGCTGGCTCAGGCAATTAAAGAGGC...GTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000545076.5
ENST00000637651.1
CDS-3UTR TCA 90 bp GACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCTGGTTTGCCTCTTTAATTGCCTaGGCCAGCGCCTGGTCATGG +
Preference number: 4 (lower is better)
Translates to: DRYKSVGLEEGTPYRLWFASLIA*ASAWSW
Trigger: CCATGACCAGGCGCTGGCTCAGGCAATTAAAGAGGC...AAACCAGAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000545076.5
ENST00000637651.1
CDS-3UTR TCA 90 bp GAACTCCATATAGGCTCTGGTTTTCCTAACGGTTTGCATGACTGCATTCATGTGGAGAGCGTATGGCACTaGGAAGGAGGCAGACAGCAG +
Preference number: 4 (lower is better)
Translates to: ELHIGSGFPNGLHDCIHVESVWH*EGGRQQ
Trigger: CTGCTGTCTGCCTCCTTCTCAGTGCCATACGCTCTC...CACATGAATGCAGTCATGCAAACCGTTAGGAAAACCAGAGCCTATATGGAGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341928.7
CDS-3UTR TCA 90 bp TCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCGCTGTGGAGCCTTCTTaGGGTCATCTTCTTCAGGAC +
Preference number: 4 (lower is better)
Translates to: STDRYKSVGLEEGTPYRLAVEPS*GHLLQD
Trigger: GTCCTGAAGAAGATGACCTCAAGAAGGCTCCACAGC...GAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400111.8
ENST00000637651.1
CDS-3UTR GCA 90 bp CGTTGCTTCATGCATTATCGGTTTAGTGATGCTGAATCAGATTGCTTTATTATGTGCTCCAGGGCCTGCTaGTGCTCCTCCTTGGGCGGC +
Preference number: 4 (lower is better)
Translates to: RCFMHYRFSDAESDCFIMCSRAC*CSSLGG
Trigger: GCCGCCCAAGGAGGAGCAGCAGCAGGCCCTGGAGCA...CATAATAAAGCAATCTGATTCAGCATCACTAAACCGATAATGCATGAAGCAACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp CTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATTGCTCCAGGGCCTGCTaGTGCTCCTCCTTGGGCGGC +
Preference number: 4 (lower is better)
Translates to: LYYGKISLPVSLLMVKVNCSRAC*CSSLGG
Trigger: GCCGCCCAAGGAGGAGCAGCAGCAGGCCCTGGAGCA...ATTGACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp TCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCCTGGCTCTTCTCGTTTaGGCTTGTGTCCTGCCACTA +
Preference number: 4 (lower is better)
Translates to: STDRYKSVGLEEGTPYRLLALLV*ACVLPL
Trigger: TAGTGGCAGGACACAAGCGCAAACGAGAAGAGCCAG...GAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp TCTTCTGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGCGGCTGCGGTGTCCGTaGGCTCACTGTCAGTCTTTC +
Preference number: 4 (lower is better)
Translates to: SSGLKFSTDRYKSVGLEERLRCP*AHCQSF
Trigger: GAAAGACTGACAGTGAGCGCACGGACACCGCAGCCG...CTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCAGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp TCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATTCTTCTGGACTGAAATTTTCGGTCTCCCCGTCGGCTaGGGTGTCCGTGCGCTCACT +
Preference number: 4 (lower is better)
Translates to: SASVFINGQGQFFWTEIFGLPVG*GVRALT
Trigger: AGTGAGCGCACGGACACCGCAGCCGACGGGGAGACC...GAAAATTTCAGTCCAGAAGAATTGACCTTGACCATTAATAAAGACACTGGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp CGTTGCTTCATGCATTATCGGTTTAGTGATGCTGAATCAGATTGCTTTATTATGGGTCTCCCCGTCGGCTaGGGTGTCCGTGCGCTCACT +
Preference number: 4 (lower is better)
Translates to: RCFMHYRFSDAESDCFIMGLPVG*GVRALT
Trigger: AGTGAGCGCACGGACACCGCAGCCGACGGGGAGACC...CATAATAAAGCAATCTGATTCAGCATCACTAAACCGATAATGCATGAAGCAACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp TCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATTCTTCTGGACTGAAATTTTCATGGGGGCATCCTCCTaGCTGGCGGCCAGTCGCACG +
Preference number: 4 (lower is better)
Translates to: SASVFINGQGQFFWTEIFMGASS*LAASRT
Trigger: CGTGCGACTGGCCGCCAGGCAGGAGGATGCCCCCAT...GAAAATTTCAGTCCAGAAGAATTGACCTTGACCATTAATAAAGACACTGGCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp ATTGCTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTATGGGGGCATCCTCCTaGCTGGCGGCCAGTCGCACG +
Preference number: 4 (lower is better)
Translates to: IALLWEDLSASVFINGQGMGASS*LAASRT
Trigger: CGTGCGACTGGCCGCCAGGCAGGAGGATGCCCCCAT...ACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAGCAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp GTTGCTTCATGCATTATCGGTTTAGTGATGCTGAATCAGATTGCTTTATTATGGATGGGGGCATCCTCCTaGCTGGCGGCCAGTCGCACG +
Preference number: 4 (lower is better)
Translates to: VASCIIGLVMLNQIALLWMGASS*LAASRT
Trigger: CGTGCGACTGGCCGCCAGGCAGGAGGATGCCCCCAT...CCATAATAAAGCAATCTGATTCAGCATCACTAAACCGATAATGCATGAAGCAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp ATTGCTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTGCATCCCCACTCGCGTaGACCACACGCCGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: IALLWEDLSASVFINGQGASPLA*TTRRSS
Trigger: GGAGGAGCGGCGTGTGGTGCACGCGAGTGGGGATGC...ACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAGCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp GTTGCTTCATGCATTATCGGTTTAGTGATGCTGAATCAGATTGCTTTATTATGGGCATCCCCACTCGCGTaGACCACACGCCGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: VASCIIGLVMLNQIALLWASPLA*TTRRSS
Trigger: GGAGGAGCGGCGTGTGGTGCACGCGAGTGGGGATGC...CCATAATAAAGCAATCTGATTCAGCATCACTAAACCGATAATGCATGAAGCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp GTGTTACATGAGACCACGGTTTATATTGTTGGTTATGAACGTGCAGGTATAGCTGAATGCGGGCTGTGCTaGAGCATCCCCGCTGTCTCC +
Preference number: 4 (lower is better)
Translates to: VLHETTVYIVGYERAGIAECGLC*SIPAVS
Trigger: GGAGACAGCGGGGATGCTGCAGCACAGCCCGCATTC...AGCTATACCTGCACGTTCATAACCAACAATATAAACCGTGGTCTCATGTAACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp CAAAGCAAGATTGGAAGCATTACATATTTCCAGAGGGTCAGAGAGTCATTACTGGAATGCGGGCTGTGCTaGAGCATCCCCGCTGTCTCC +
Preference number: 4 (lower is better)
Translates to: QSKIGSITYFQRVRESLLECGLC*SIPAVS
Trigger: GGAGACAGCGGGGATGCTGCAGCACAGCCCGCATTC...CAGTAATGACTCTCTGACCCTCTGGAAATATGTAATGCTTCCAATCTTGCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000544123.5
ENST00000637651.1
CDS-3UTR GCA 90 bp TCTTCTGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGTGTGAATGCGGGCTGTaGTGCAGCATCCCCGCTGTC +
Preference number: 4 (lower is better)
Translates to: SSGLKFSTDRYKSVGLEECECGL*CSIPAV
Trigger: GACAGCGGGGATGCTGCAGCACAGCCCGCATTCACA...CTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCAGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp GACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCTGGTTTTGGATGGCTGCACTCTaGTCCTCTTGTCGCTCACGG +
Preference number: 4 (lower is better)
Translates to: DRYKSVGLEEGTPYRLWFWMAAL*SSCRSR
Trigger: CCGTGAGCGACAAGAGGAGCAGAGTGCAGCCATCCA...AAACCAGAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp TCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCAGATGTGATCGTCTGTaGACTCATCAGCACGCCTGG +
Preference number: 4 (lower is better)
Translates to: STDRYKSVGLEEGTPYRLRCDRL*THQHAW
Trigger: CCAGGCGTGCTGATGAGTGCACAGACGATCACATCT...GAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp CGCTCACGGGAAGCAGCGGCTGTCTCTTCCTGTTCCAGGACAGCTTTAGCGACCTCTAATAATTATGGCTaGAATCTCTTCTCCTCTGAA +
Preference number: 4 (lower is better)
Translates to: RSREAAAVSSCSRTALATSNNYG*NLFSSE
Trigger: TTCAGAGGAGAAGAGATTGCAGCCATAATTATTAGA...GGTCGCTAAAGCTGTCCTGGAACAGGAAGAGACAGCCGCTGCTTCCCGTGAGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637651.1
CDS-3UTR CCA 90 bp CAATTCTTCTGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGATCCGCGGACGACGCCTaGAGACAGCTGCCAATGCCA +
Preference number: 4 (lower is better)
Translates to: QFFWTEIFHGQIQVSWVRSADDA*RQLPMP
Trigger: TGGCATTGGCAGCTGTCTCCAGGCGTCGTCCGCGGA...TCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCAGAAGAATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342933.7
ENST00000540638.6
CDS-3UTR CCA 90 bp AAAGCAAGATTGGAAGCATTACATATTTCCAGAGGGTCAGAGAGTCATTACTGTTGGGGCTCGGCCTCCTaGTCCGGCTTGGATTCCGAG +
Preference number: 4 (lower is better)
Translates to: KARLEALHISRGSESHYCWGSAS*SGLDSE
Trigger: CTCGGAATCCAAGCCGGACCAGGAGGCCGAGCCCCA...ACAGTAATGACTCTCTGACCCTCTGGAAATATGTAATGCTTCCAATCTTGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000544123.5
ENST00000637651.1
CDS-3UTR CCA 90 bp TCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCCATCTCTGCTTCTGCTaGCGTCATTCCTCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: STDRYKSVGLEEGTPYRLHLCFC*RHSSVA
Trigger: AGCCACAGAGGAATGACGCCAGCAGAAGCAGAGATG...GAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp TTCCTTCGGGGACCAAAGAGGCCCACTTTTAAGACCTCACTCTCGGGCACTTGCAGGTTAGGAATTTCTTaGGAGGTGCTTCTGGTAACA +
Preference number: 4 (lower is better)
Translates to: FLRGPKRPTFKTSLSGTCRLGIS*EVLLVT
Trigger: TGTTACCAGAAGCACCTCCCAAGAAATTCCTAACCT...GCAAGTGCCCGAGAGTGAGGTCTTAAAAGTGGGCCTCTTTGGTCCCCGAAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637651.1
CDS-3UTR CCA 90 bp AGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCTGGTTTTCCGTCGCACGGGGGAGGTaGAAAGCCTCTTCTCCCATT +
Preference number: 4 (lower is better)
Translates to: RYKSVGLEEGTPYRLWFSVARGR*KASSPI
Trigger: AATGGGAGAAGAGGCTTTCCACCTCCCCCGTGCGAC...GGAAAACCAGAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp GAACTCCATATAGGCTCTGGTTTTCCTAACGGTTTGCATGACTGCATTCATGTGGTCGCACGGGGGAGGTaGAAAGCCTCTTCTCCCATT +
Preference number: 4 (lower is better)
Translates to: ELHIGSGFPNGLHDCIHVVARGR*KASSPI
Trigger: AATGGGAGAAGAGGCTTTCCACCTCCCCCGTGCGAC...CACATGAATGCAGTCATGCAAACCGTTAGGAAAACCAGAGCCTATATGGAGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp GAACTCCATATAGGCTCTGGTTTTCCTAACGGTTTGCATGACTGCATTCATGTGGCAGGTGGTGCACGGTaGGTTCCGTCTCTATTCCAC +
Preference number: 4 (lower is better)
Translates to: ELHIGSGFPNGLHDCIHVAGGAR*VPSLFH
Trigger: GTGGAATAGAGACGGAACCCACCGTGCACCACCTGC...CACATGAATGCAGTCATGCAAACCGTTAGGAAAACCAGAGCCTATATGGAGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp CAAAGCAAGATTGGAAGCATTACATATTTCCAGAGGGTCAGAGAGTCATTACTGGTGCTAAGCGGCAGGTaGTGCACGGTGGGTTCCGTC +
Preference number: 4 (lower is better)
Translates to: QSKIGSITYFQRVRESLLVLSGR*CTVGSV
Trigger: GACGGAACCCACCGTGCACCACCTGCCGCTTAGCAC...CAGTAATGACTCTCTGACCCTCTGGAAATATGTAATGCTTCCAATCTTGCTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000544123.5
ENST00000637651.1
CDS-3UTR CCA 90 bp CATTCGGACAGGCTCTTCCTTCGGGGACCAAAGAGGCCCACTTTTAAGACCTCATTTCTGAAATGTGGATaGCTGCACTCTGCTCCTCTT +
Preference number: 4 (lower is better)
Translates to: HSDRLFLRGPKRPTFKTSFLKCG*LHSAPL
Trigger: AAGAGGAGCAGAGTGCAGCCATCCACATTTCAGAAA...TGAGGTCTTAAAAGTGGGCCTCTTTGGTCCCCGAAGGAAGAGCCTGTCCGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637651.1
CDS-3UTR CCA 90 bp GACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCTGGTTTACTCATCAGCACGCCTaGCTCCAGATCTGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: DRYKSVGLEEGTPYRLWFTHQHA*LQICAW
Trigger: CCAGGCACAGATCTGGAGCCAGGCGTGCTGATGAGT...AAACCAGAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp AGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCTGGTTTTCCACTCATCAGCACGCCTaGCTCCAGATCTGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: RYKSVGLEEGTPYRLWFSTHQHA*LQICAW
Trigger: CCAGGCACAGATCTGGAGCCAGGCGTGCTGATGAGT...GGAAAACCAGAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp GGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATTCTTCTGGAGCCAGCGCCTGGTCATaGTCAATGTCTGCATCCCCC +
Preference number: 4 (lower is better)
Translates to: GKISLPVSLLMVKVNSSGASAWS*SMSASP
Trigger: GGGGGATGCAGACATTGACCATGACCAGGCGCTGGC...TCCAGAAGAATTGACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp GTGTTACATGAGACCACGGTTTATATTGTTGGTTATGAACGTGCAGGTATAGCTTCAAGGAGGCCGCCTTaGGCTCCAGGTAGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: VLHETTVYIVGYERAGIASRRPP*APGSRG
Trigger: GCCTCTGCTACCTGGAGCCCAAGGCGGCCTCCTTGA...AGCTATACCTGCACGTTCATAACCAACAATATAAACCGTGGTCTCATGTAACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341928.7
CDS-3UTR CCA 90 bp GTTGCTTCATGCATTATCGGTTTAGTGATGCTGAATCAGATTGCTTTATTATGGGCTCCTCAGTGGCAGTaGTCTCCCCGTCGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: VASCIIGLVMLNQIALLWAPQWQ*SPRRLR
Trigger: CCGCAGCCGACGGGGAGACCACTGCCACTGAGGAGC...CCATAATAAAGCAATCTGATTCAGCATCACTAAACCGATAATGCATGAAGCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000540638.6
ENST00000545076.5
CDS-3UTR CCA 90 bp GTTGCTTCATGCATTATCGGTTTAGTGATGCTGAATCAGATTGCTTTATTATGGCTCCCGCAGCTGCGGTaGCGGCACCTCCAAGTTGCC +
Preference number: 4 (lower is better)
Translates to: VASCIIGLVMLNQIALLWLPQLR*RHLQVA
Trigger: GGCAACTTGGAGGTGCCGCCACCGCAGCTGCGGGAG...CCATAATAAAGCAATCTGATTCAGCATCACTAAACCGATAATGCATGAAGCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637651.1
CDS-3UTR TCA 90 bp CTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATCCTGTTCCTTGTCAGTaGCCTCCCTCCGCACCGGGG +
Preference number: 4 (lower is better)
Translates to: LYYGKISLPVSLLMVKVNPVPCQ*PPSAPG
Trigger: CCCCGGTGCGGAGGGAGGTCACTGACAAGGAACAGG...ATTGACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR TCA 90 bp AGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCTGGTTTTCCATAGTCTCCGAGCTCTaGCTGGACAGTGTAGGAGCC +
Preference number: 4 (lower is better)
Translates to: RYKSVGLEEGTPYRLWFSIVSEL*LDSVGA
Trigger: GGCTCCTACACTGTCCAGTCAGAGCTCGGAGACTAT...GGAAAACCAGAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR TCA 90 bp TCCTCTCCATCTTCTGGTGTGATCTCTGTCTCTTTATGGACCACTACTTTGGTCCTACATGCAGGTCTGTaGTGGGACCATACAGTGCTC +
Preference number: 4 (lower is better)
Translates to: SSPSSGVISVSLWTTTLVLHAGL*WDHTVL
Trigger: GAGCACTGTATGGTCCCATCACAGACCTGCATGTAG...GACCAAAGTAGTGGTCCATAAAGAGACAGAGATCACACCAGAAGATGGAGAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637651.1
CDS-3UTR GCA 90 bp CAAAGCAAGATTGGAAGCATTACATATTTCCAGAGGGTCAGAGAGTCATTACTGCACGCCCAGAGACCGTaGGAGGAAAGCCAACCTCGT +
Preference number: 4 (lower is better)
Translates to: QSKIGSITYFQRVRESLLHAQRP*EESQPR
Trigger: ACGAGGTTGGCTTTCCTCGCACGGTCTCTGGGCGTG...CAGTAATGACTCTCTGACCCTCTGGAAATATGTAATGCTTCCAATCTTGCTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342933.7
CDS-3UTR GCA 90 bp AGCAAGATTGGAAGCATTACATATTTCCAGAGGGTCAGAGAGTCATTACTGTTTAACTGCTCCAGGGCCTaGTGCTGCTCCTCCTTGGGC +
Preference number: 4 (lower is better)
Translates to: SKIGSITYFQRVRESLLFNCSRA*CCSSLG
Trigger: GCCCAAGGAGGAGCAGCAGCAGGCCCTGGAGCAGTT...AAACAGTAATGACTCTCTGACCCTCTGGAAATATGTAATGCTTCCAATCTTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000544123.5
ENST00000637651.1
CDS-3UTR GCA 90 bp AAAGCAAGATTGGAAGCATTACATATTTCCAGAGGGTCAGAGAGTCATTACTGTAACTGCTCCAGGGCCTaGTGCTGCTCCTCCTTGGGC +
Preference number: 4 (lower is better)
Translates to: KARLEALHISRGSESHYCNCSRA*CCSSLG
Trigger: GCCCAAGGAGGAGCAGCAGCAGGCCCTGGAGCAGTT...ACAGTAATGACTCTCTGACCCTCTGGAAATATGTAATGCTTCCAATCTTGCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000544123.5
ENST00000637651.1
CDS-3UTR GCA 90 bp TCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCCCTCTGTGGCTCTTGTaGAGCTCGATCACTTTGTCT +
Preference number: 4 (lower is better)
Translates to: STDRYKSVGLEEGTPYRLPLWLL*SSITLS
Trigger: AGACAAAGTGATCGAGCTGCACAAGAGCCACAGAGG...GAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp TCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCATGCATCTCTGCTTCTaGTGGCGTCATTCCTCTGTG +
Preference number: 4 (lower is better)
Translates to: STDRYKSVGLEEGTPYRLMHLCF*WRHSSV
Trigger: CACAGAGGAATGACGCCAGCAGAAGCAGAGATGCAT...GAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp CAAAGCAAGATTGGAAGCATTACATATTTCCAGAGGGTCAGAGAGTCATTACTGTCAGTCTTTCCCTCGTaGCGGATGGCCGAGATGGGC +
Preference number: 4 (lower is better)
Translates to: QSKIGSITYFQRVRESLLSVFPS*RMAEMG
Trigger: GCCCATCTCGGCCATCCGGCACGAGGGAAAGACTGA...CAGTAATGACTCTCTGACCCTCTGGAAATATGTAATGCTTCCAATCTTGCTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342933.7
ENST00000400111.8
ENST00000544123.5
ENST00000637651.1
CDS-3UTR GCA 90 bp CAATTCTTCTGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGATCAGTCTTTCCCTCGTaGCGGATGGCCGAGATGGGC +
Preference number: 4 (lower is better)
Translates to: QFFWTEIFHGQIQVSWVRSVFPS*RMAEMG
Trigger: GCCCATCTCGGCCATCCGGCACGAGGGAAAGACTGA...TCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCAGAAGAATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp CAATTCTTCTGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGACGGCTGCGGTGTCCGTaGGCTCACTGTCAGTCTTTC +
Preference number: 4 (lower is better)
Translates to: QFFWTEIFHGQIQVSWVRRLRCP*AHCQSF
Trigger: GAAAGACTGACAGTGAGCGCACGGACACCGCAGCCG...TCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCAGAAGAATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp CAATTCTTCTGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGACTAAGCGGCAGGTGGTaGACGGTGGGTTCCGTCTCT +
Preference number: 4 (lower is better)
Translates to: QFFWTEIFHGQIQVSWVRLSGRW*TVGSVS
Trigger: AGAGACGGAACCCACCGTGCACCACCTGCCGCTTAG...TCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCAGAAGAATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp ATGAATTCTGTTGGTTTTCGCGCAGACTCTAATAAACTGAAGATTTCAGAGCCAGAATGCGGGCTGTGCTaGAGCATCCCCGCTGTCTCC +
Preference number: 4 (lower is better)
Translates to: MNSVGFRADSNKLKISEPECGLC*SIPAVS
Trigger: GGAGACAGCGGGGATGCTGCAGCACAGCCCGCATTC...TGGCTCTGAAATCTTCAGTTTATTAGAGTCTGCGCGAAAACCAACAGAATTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637651.1
CDS-3UTR GCA 90 bp AAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATTGTGAATGCGGGCTGTaGTGCAGCATCCCCGCTGTC +
Preference number: 4 (lower is better)
Translates to: KFSTDRYKSVGLEEGTPYCECGL*CSIPAV
Trigger: GACAGCGGGGATGCTGCAGCACAGCCCGCATTCACA...ATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp TGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACCTGGCTCCAGATCTGTaGCTGGATCGACCTGTGATG +
Preference number: 4 (lower is better)
Translates to: WTEIFHGQIQVSWVRRGNLAPDL*LDRPVM
Trigger: CATCACAGGTCGATCCAGGCACAGATCTGGAGCCAG...GTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp TCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCTGGTCTGGTTTTGCCTaGCCCACCCTTGTTTCCTTT +
Preference number: 4 (lower is better)
Translates to: STDRYKSVGLEEGTPYRLWSGFA*PTLVSF
Trigger: AAAGGAAACAAGGGTGGGGCAGGCAAAACCAGACCA...GAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544123.5
CDS-3UTR GCA 90 bp GACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCTGGTTTCAGGGGATCTGTCCTTaGCTGTGGCATCCCGTTCTA +
Preference number: 4 (lower is better)
Translates to: DRYKSVGLEEGTPYRLWFQGICP*LWHPVL
Trigger: TAGAACGGGATGCCACAGGCAAGGACAGATCCCCTG...AAACCAGAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545076.5
CDS-3UTR CCA 90 bp CGTTGCTTCATGCATTATCGGTTTAGTGATGCTGAATCAGATTGCTTTATTATGTGGGGCTCGGCCTCCTaGTCCGGCTTGGATTCCGAG +
Preference number: 4 (lower is better)
Translates to: RCFMHYRFSDAESDCFIMWGSAS*SGLDSE
Trigger: CTCGGAATCCAAGCCGGACCAGGAGGCCGAGCCCCA...CATAATAAAGCAATCTGATTCAGCATCACTAAACCGATAATGCATGAAGCAACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp TCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATTCTTCTGGACTGAAATTTTCTGGGGCTCGGCCTCCTaGTCCGGCTTGGATTCCGAG +
Preference number: 4 (lower is better)
Translates to: SASVFINGQGQFFWTEIFWGSAS*SGLDSE
Trigger: CTCGGAATCCAAGCCGGACCAGGAGGCCGAGCCCCA...GAAAATTTCAGTCCAGAAGAATTGACCTTGACCATTAATAAAGACACTGGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp CTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATTGGGGCTCGGCCTCCTaGTCCGGCTTGGATTCCGAG +
Preference number: 4 (lower is better)
Translates to: LYYGKISLPVSLLMVKVNWGSAS*SGLDSE
Trigger: CTCGGAATCCAAGCCGGACCAGGAGGCCGAGCCCCA...ATTGACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp ATTGCTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCCTGGTCCGACTCAGTaGCAGTGGTCTCCCCGTCGG +
Preference number: 4 (lower is better)
Translates to: IALLWEDLSASVFINGQGPGPTQ*QWSPRR
Trigger: CCGACGGGGAGACCACTGCCACTGAGTCGGACCAGG...ACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAGCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000544123.5
ENST00000637651.1
CDS-3UTR CCA 90 bp GAACTCCATATAGGCTCTGGTTTTCCTAACGGTTTGCATGACTGCATTCATGTGTCTGCATCTTCCTCCTaGTCCGACTCAGTGGCAGTG +
Preference number: 4 (lower is better)
Translates to: ELHIGSGFPNGLHDCIHVSASSS*SDSVAV
Trigger: CACTGCCACTGAGTCGGACCAGGAGGAAGATGCAGA...CACATGAATGCAGTCATGCAAACCGTTAGGAAAACCAGAGCCTATATGGAGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000544123.5
ENST00000637651.1
CDS-3UTR CCA 90 bp GACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCTGGTTTTCTGCATCTTCCTCCTaGTCCGACTCAGTGGCAGTG +
Preference number: 4 (lower is better)
Translates to: DRYKSVGLEEGTPYRLWFSASSS*SDSVAV
Trigger: CACTGCCACTGAGTCGGACCAGGAGGAAGATGCAGA...AAACCAGAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000544123.5
ENST00000637651.1
CDS-3UTR CCA 90 bp GGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATTCTTCTGGACAAGTGGTTCGATCATaGGGGCATCCTCCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: GKISLPVSLLMVKVNSSGQVVRS*GHPPAW
Trigger: CCAGGCAGGAGGATGCCCCCATGATCGAACCACTTG...TCCAGAAGAATTGACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp TCTTCTGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGCAGGTGGTGCACGGTaGGTTCCGTCTCTATTCCAC +
Preference number: 4 (lower is better)
Translates to: SSGLKFSTDRYKSVGLEEAGGAR*VPSLFH
Trigger: GTGGAATAGAGACGGAACCCACCGTGCACCACCTGC...CTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCAGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp TCTTCTGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGACTCATCAGCACGCCTaGCTCCAGATCTGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: SSGLKFSTDRYKSVGLEETHQHA*LQICAW
Trigger: CCAGGCACAGATCTGGAGCCAGGCGTGCTGATGAGT...CTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCAGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp GTGTTACATGAGACCACGGTTTATATTGTTGGTTATGAACGTGCAGGTATAGCTGCCAGCGCCTGGTCATaGTCAATGTCTGCATCCCCC +
Preference number: 4 (lower is better)
Translates to: VLHETTVYIVGYERAGIAASAWS*SMSASP
Trigger: GGGGGATGCAGACATTGACCATGACCAGGCGCTGGC...AGCTATACCTGCACGTTCATAACCAACAATATAAACCGTGGTCTCATGTAACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp AAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATGCCAGCGCCTGGTCATaGTCAATGTCTGCATCCCCC +
Preference number: 4 (lower is better)
Translates to: KFSTDRYKSVGLEEGTPYASAWS*SMSASP
Trigger: GGGGGATGCAGACATTGACCATGACCAGGCGCTGGC...ATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp AAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATTGGGGGCACAATGGGTaGATGGGGGTGACAAGGGAC +
Preference number: 4 (lower is better)
Translates to: KFSTDRYKSVGLEEGTPYWGHNG*MGVTRD
Trigger: GTCCCTTGTCACCCCCATCCACCCATTGTGCCCCCA...ATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000341928.7
CDS-3UTR CCA 90 bp GGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATTCTTCTGGAGCAGGTGCTCAGCTCTaGACGGCTCATAACCTGGCA +
Preference number: 4 (lower is better)
Translates to: GKISLPVSLLMVKVNSSGAGAQL*TAHNLA
Trigger: TGCCAGGTTATGAGCCGTCCAGAGCTGAGCACCTGC...TCCAGAAGAATTGACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341928.7
CDS-3UTR CCA 90 bp TCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCTGTCGTCTGGACCTCTaGTCCTCTCTTGGATTTCTC +
Preference number: 4 (lower is better)
Translates to: STDRYKSVGLEEGTPYRLCRLDL*SSLGFL
Trigger: GAGAAATCCAAGAGAGGACCAGAGGTCCAGACGACA...GAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400111.8
ENST00000637651.1
CDS-3UTR CCA 90 bp TGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTTCCGCTGTGTCGTCTaGACCTCTGGTCCTCTCTTG +
Preference number: 4 (lower is better)
Translates to: WTEIFHGQIQVSWVRRGNFRCVV*TSGPLL
Trigger: CAAGAGAGGACCAGAGGTCCAGACGACACAGCGGAA...GTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400111.8
ENST00000637651.1
CDS-3UTR CCA 90 bp TCTTCTGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGTTTCTAGCTCCTCAGTaGCAGTGGTCTCCCCGTCGG +
Preference number: 4 (lower is better)
Translates to: SSGLKFSTDRYKSVGLEEFLAPQ*QWSPRR
Trigger: CCGACGGGGAGACCACTGCCACTGAGGAGCTAGAAA...CTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCAGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000540638.6
ENST00000545076.5
CDS-3UTR CCA 90 bp GGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATTCTTCTGGAAGTCAAGACCAGAGATaGGCGGGGATGTCCCCACTC +
Preference number: 4 (lower is better)
Translates to: GKISLPVSLLMVKVNSSGSQDQR*AGMSPL
Trigger: GAGTGGGGACATCCCCGCCCATCTCTGGTCTTGACT...TCCAGAAGAATTGACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545076.5
CDS-3UTR CCA 90 bp ACACACTTTATCAAACAGCACTTGTCCTCTGGAGCGTTTCTCTACATCACAGGTGCGTCATTAGTTTTCTaGCCTGGGCTCACCTCCCTC +
Preference number: 4 (lower is better)
Translates to: THFIKQHLSSGAFLYITGASLVF*PGLTSL
Trigger: GAGGGAGGTGAGCCCAGGCCAGAAAACTAATGACGC...ACCTGTGATGTAGAGAAACGCTCCAGAGGACAAGTGCTGTTTGATAAAGTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580866.2
CDS-3UTR TCA 90 bp GGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATTCTTCTGGAATAGTCTCCGAGCTCTaGCTGGACAGTGTAGGAGCC +
Preference number: 4 (lower is better)
Translates to: GKISLPVSLLMVKVNSSGIVSEL*LDSVGA
Trigger: GGCTCCTACACTGTCCAGTCAGAGCTCGGAGACTAT...TCCAGAAGAATTGACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR TCA 90 bp CGTTGCTTCATGCATTATCGGTTTAGTGATGCTGAATCAGATTGCTTTATTATGTGGCCGAGATGGGCGTaGCTTCTTCCCCCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: RCFMHYRFSDAESDCFIMWPRWA*LLPPSS
Trigger: GGAGGAAGGGGGAAGAAGTCACGCCCATCTCGGCCA...CATAATAAAGCAATCTGATTCAGCATCACTAAACCGATAATGCATGAAGCAACG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR TCA 90 bp TCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCGTTTTGGTTTCGGTGTaGACTACTGGCACTTCCTTC +
Preference number: 4 (lower is better)
Translates to: STDRYKSVGLEEGTPYRLVLVSV*TTGTSF
Trigger: GAAGGAAGTGCCAGTAGTTCACACCGAAACCAAAAC...GAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR TCA 90 bp TCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCTGGTGGTTTCAGATGTaGTCGTCTGTGCACTCATCA +
Preference number: 4 (lower is better)
Translates to: STDRYKSVGLEEGTPYRLWWFQM*SSVHSS
Trigger: TGATGAGTGCACAGACGATCACATCTGAAACCACCA...GAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR TCA 90 bp CGTTGCTTCATGCATTATCGGTTTAGTGATGCTGAATCAGATTGCTTTATTATGGGGCACAAGGGACGGTaGGCGGATCGGGAGGTAATG +
Preference number: 4 (lower is better)
Translates to: RCFMHYRFSDAESDCFIMGHKGR*ADREVM
Trigger: CATTACCTCCCGATCCGCTCACCGTCCCTTGTGCCC...CATAATAAAGCAATCTGATTCAGCATCACTAAACCGATAATGCATGAAGCAACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341928.7
CDS-3UTR GCA 90 bp GAACTCCATATAGGCTCTGGTTTTCCTAACGGTTTGCATGACTGCATTCATGTGCTGGCTCTTCTCGTTTaGGCTTGTGTCCTGCCACTA +
Preference number: 4 (lower is better)
Translates to: ELHIGSGFPNGLHDCIHVLALLV*ACVLPL
Trigger: TAGTGGCAGGACACAAGCGCAAACGAGAAGAGCCAG...CACATGAATGCAGTCATGCAAACCGTTAGGAAAACCAGAGCCTATATGGAGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp AAAGCAAGATTGGAAGCATTACATATTTCCAGAGGGTCAGAGAGTCATTACTGTCTAAGCGGCAGGTGGTaGACGGTGGGTTCCGTCTCT +
Preference number: 4 (lower is better)
Translates to: KARLEALHISRGSESHYCLSGRW*TVGSVS
Trigger: AGAGACGGAACCCACCGTGCACCACCTGCCGCTTAG...ACAGTAATGACTCTCTGACCCTCTGGAAATATGTAATGCTTCCAATCTTGCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000544123.5
ENST00000637651.1
CDS-3UTR GCA 90 bp CTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATGAATGCGGGCTGTGCTaGAGCATCCCCGCTGTCTCC +
Preference number: 4 (lower is better)
Translates to: LYYGKISLPVSLLMVKVNECGLC*SIPAVS
Trigger: GGAGACAGCGGGGATGCTGCAGCACAGCCCGCATTC...ATTGACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp GTTGCTTCATGCATTATCGGTTTAGTGATGCTGAATCAGATTGCTTTATTATGGGAATGCGGGCTGTGCTaGAGCATCCCCGCTGTCTCC +
Preference number: 4 (lower is better)
Translates to: VASCIIGLVMLNQIALLWECGLC*SIPAVS
Trigger: GGAGACAGCGGGGATGCTGCAGCACAGCCCGCATTC...CCATAATAAAGCAATCTGATTCAGCATCACTAAACCGATAATGCATGAAGCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp ATTGCTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTGAATGCGGGCTGTGCTaGAGCATCCCCGCTGTCTCC +
Preference number: 4 (lower is better)
Translates to: IALLWEDLSASVFINGQGECGLC*SIPAVS
Trigger: GGAGACAGCGGGGATGCTGCAGCACAGCCCGCATTC...ACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAGCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp TTGCTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCTGTGAATGCGGGCTGTaGTGCAGCATCCCCGCTGTC +
Preference number: 4 (lower is better)
Translates to: LLYYGKISLPVSLLMVKVCECGL*CSIPAV
Trigger: GACAGCGGGGATGCTGCAGCACAGCCCGCATTCACA...GACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp AGCAAGATTGGAAGCATTACATATTTCCAGAGGGTCAGAGAGTCATTACTGTTTTGTGAATGCGGGCTGTaGTGCAGCATCCCCGCTGTC +
Preference number: 4 (lower is better)
Translates to: SKIGSITYFQRVRESLLFCECGL*CSIPAV
Trigger: GACAGCGGGGATGCTGCAGCACAGCCCGCATTCACA...AAACAGTAATGACTCTCTGACCCTCTGGAAATATGTAATGCTTCCAATCTTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000544123.5
ENST00000637651.1
CDS-3UTR GCA 90 bp AAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATTGGATGGCTGCACTCTaGTCCTCTTGTCGCTCACGG +
Preference number: 4 (lower is better)
Translates to: KFSTDRYKSVGLEEGTPYWMAAL*SSCRSR
Trigger: CCGTGAGCGACAAGAGGAGCAGAGTGCAGCCATCCA...ATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp CAATTCTTCTGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGATGGATGGCTGCACTCTaGTCCTCTTGTCGCTCACGG +
Preference number: 4 (lower is better)
Translates to: QFFWTEIFHGQIQVSWVRWMAAL*SSCRSR
Trigger: CCGTGAGCGACAAGAGGAGCAGAGTGCAGCCATCCA...TCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCAGAAGAATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp GTGTTACATGAGACCACGGTTTATATTGTTGGTTATGAACGTGCAGGTATAGCTTGGATGGCTGCACTCTaGTCCTCTTGTCGCTCACGG +
Preference number: 4 (lower is better)
Translates to: VLHETTVYIVGYERAGIAWMAAL*SSCRSR
Trigger: CCGTGAGCGACAAGAGGAGCAGAGTGCAGCCATCCA...AGCTATACCTGCACGTTCATAACCAACAATATAAACCGTGGTCTCATGTAACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp GACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCTGGTTTAGATGTGATCGTCTGTaGACTCATCAGCACGCCTGG +
Preference number: 4 (lower is better)
Translates to: DRYKSVGLEEGTPYRLWFRCDRL*THQHAW
Trigger: CCAGGCGTGCTGATGAGTGCACAGACGATCACATCT...AAACCAGAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp TCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCGTCATGGTCAATGTCTaGATCCCCCGTGATGACTAT +
Preference number: 4 (lower is better)
Translates to: STDRYKSVGLEEGTPYRLVMVNV*IPRDDY
Trigger: ATAGTCATCACGGGGGATGCAGACATTGACCATGAC...GAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp TCTAGCTTTACTCCTCCCGGTGAAACACTGCCAAAACTGATGGTTTCCGTCTTCGTCATGGTCAATGTCTaGATCCCCCGTGATGACTAT +
Preference number: 4 (lower is better)
Translates to: SSFTPPGETLPKLMVSVFVMVNV*IPRDDY
Trigger: ATAGTCATCACGGGGGATGCAGACATTGACCATGAC...GAAGACGGAAACCATCAGTTTTGGCAGTGTTTCACCGGGAGGAGTAAAGCTAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637651.1
CDS-3UTR GCA 90 bp ATTGCTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTGGTGACTTTCCCTCGTaGCGGATGGCCGAGATGGGC +
Preference number: 4 (lower is better)
Translates to: IALLWEDLSASVFINGQGGDFPS*RMAEMG
Trigger: GCCCATCTCGGCCATCCGGCACGAGGGAAAGTCACC...ACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAGCAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341928.7
CDS-3UTR GCA 90 bp AGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCTGGTTTTCCAGGGACATGAGTCAGTaGCAAGCCCAGGTGACTTTC +
Preference number: 4 (lower is better)
Translates to: RYKSVGLEEGTPYRLWFSRDMSQ*QAQVTF
Trigger: GAAAGTCACCTGGGCTTGGCACTGACTCATGTCCCT...GGAAAACCAGAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341928.7
CDS-3UTR CCA 90 bp ATTGCTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTTCCGCGGACGACGCCTaGAGACAGCTGCCAATGCCA +
Preference number: 4 (lower is better)
Translates to: IALLWEDLSASVFINGQGSADDA*RQLPMP
Trigger: TGGCATTGGCAGCTGTCTCCAGGCGTCGTCCGCGGA...ACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAGCAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342933.7
ENST00000540638.6
CDS-3UTR CCA 90 bp CAAAGCAAGATTGGAAGCATTACATATTTCCAGAGGGTCAGAGAGTCATTACTGCCTCCTGGTCCGGCTTaGATTCCGAGTCTGATCCAG +
Preference number: 4 (lower is better)
Translates to: QSKIGSITYFQRVRESLLPPGPA*IPSLIQ
Trigger: CTGGATCAGACTCGGAATCCAAGCCGGACCAGGAGG...CAGTAATGACTCTCTGACCCTCTGGAAATATGTAATGCTTCCAATCTTGCTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000544123.5
CDS-3UTR CCA 90 bp GTGTTACATGAGACCACGGTTTATATTGTTGGTTATGAACGTGCAGGTATAGCTCCTCCTGGTCCGGCTTaGATTCCGAGTCTGATCCAG +
Preference number: 4 (lower is better)
Translates to: VLHETTVYIVGYERAGIAPPGPA*IPSLIQ
Trigger: CTGGATCAGACTCGGAATCCAAGCCGGACCAGGAGG...AGCTATACCTGCACGTTCATAACCAACAATATAAACCGTGGTCTCATGTAACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
CDS-3UTR CCA 90 bp GGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATTCTTCTGGAGGCGTCATTCCTCTGTaGCTCTTGTGCAGCTCGATC +
Preference number: 4 (lower is better)
Translates to: GKISLPVSLLMVKVNSSGGVIPL*LLCSSI
Trigger: GATCGAGCTGCACAAGAGCCACAGAGGAATGACGCC...TCCAGAAGAATTGACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp GACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCTGGTTTCATCTCTGCTTCTGCTaGCGTCATTCCTCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: DRYKSVGLEEGTPYRLWFHLCFC*RHSSVA
Trigger: AGCCACAGAGGAATGACGCCAGCAGAAGCAGAGATG...AAACCAGAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp GAACTCCATATAGGCTCTGGTTTTCCTAACGGTTTGCATGACTGCATTCATGTGCGCTTGGCAGCTCGATaGTTTGGCAGCTTAAACCCA +
Preference number: 4 (lower is better)
Translates to: ELHIGSGFPNGLHDCIHVRLAAR*FGSLNP
Trigger: TGGGTTTAAGCTGCCAAACCATCGAGCTGCCAAGCG...CACATGAATGCAGTCATGCAAACCGTTAGGAAAACCAGAGCCTATATGGAGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp CAATTCTTCTGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAGTCGCACGGGGGAGGTaGAAAGCCTCTTCTCCCATT +
Preference number: 4 (lower is better)
Translates to: QFFWTEIFHGQIQVSWVRVARGR*KASSPI
Trigger: AATGGGAGAAGAGGCTTTCCACCTCCCCCGTGCGAC...TCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCAGAAGAATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp AAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATGTCGCACGGGGGAGGTaGAAAGCCTCTTCTCCCATT +
Preference number: 4 (lower is better)
Translates to: KFSTDRYKSVGLEEGTPYVARGR*KASSPI
Trigger: AATGGGAGAAGAGGCTTTCCACCTCCCCCGTGCGAC...ATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp GTGTTACATGAGACCACGGTTTATATTGTTGGTTATGAACGTGCAGGTATAGCTCAAGTGGTTCGATCATaGGGGCATCCTCCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: VLHETTVYIVGYERAGIAQVVRS*GHPPAW
Trigger: CCAGGCAGGAGGATGCCCCCATGATCGAACCACTTG...AGCTATACCTGCACGTTCATAACCAACAATATAAACCGTGGTCTCATGTAACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp CAATTCTTCTGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGACAAGTGGTTCGATCATaGGGGCATCCTCCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: QFFWTEIFHGQIQVSWVRQVVRS*GHPPAW
Trigger: CCAGGCAGGAGGATGCCCCCATGATCGAACCACTTG...TCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCAGAAGAATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp TGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACCTCTTCAGGGACAAGTaGTTCGATCATGGGGGCATC +
Preference number: 4 (lower is better)
Translates to: WTEIFHGQIQVSWVRRGNLFRDK*FDHGGI
Trigger: GATGCCCCCATGATCGAACCACTTGTCCCTGAAGAG...GTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp GTGTTACATGAGACCACGGTTTATATTGTTGGTTATGAACGTGCAGGTATAGCTGCAGGTGGTGCACGGTaGGTTCCGTCTCTATTCCAC +
Preference number: 4 (lower is better)
Translates to: VLHETTVYIVGYERAGIAAGGAR*VPSLFH
Trigger: GTGGAATAGAGACGGAACCCACCGTGCACCACCTGC...AGCTATACCTGCACGTTCATAACCAACAATATAAACCGTGGTCTCATGTAACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp CGTTGCTTCATGCATTATCGGTTTAGTGATGCTGAATCAGATTGCTTTATTATGGTGCTAAGCGGCAGGTaGTGCACGGTGGGTTCCGTC +
Preference number: 4 (lower is better)
Translates to: RCFMHYRFSDAESDCFIMVLSGR*CTVGSV
Trigger: GACGGAACCCACCGTGCACCACCTGCCGCTTAGCAC...CATAATAAAGCAATCTGATTCAGCATCACTAAACCGATAATGCATGAAGCAACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp CTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATGTGCTAAGCGGCAGGTaGTGCACGGTGGGTTCCGTC +
Preference number: 4 (lower is better)
Translates to: LYYGKISLPVSLLMVKVNVLSGR*CTVGSV
Trigger: GACGGAACCCACCGTGCACCACCTGCCGCTTAGCAC...ATTGACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp GTTGCTTCATGCATTATCGGTTTAGTGATGCTGAATCAGATTGCTTTATTATGGGTGCTAAGCGGCAGGTaGTGCACGGTGGGTTCCGTC +
Preference number: 4 (lower is better)
Translates to: VASCIIGLVMLNQIALLWVLSGR*CTVGSV
Trigger: GACGGAACCCACCGTGCACCACCTGCCGCTTAGCAC...CCATAATAAAGCAATCTGATTCAGCATCACTAAACCGATAATGCATGAAGCAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp CAATTCTTCTGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAACTCATCAGCACGCCTaGCTCCAGATCTGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: QFFWTEIFHGQIQVSWVRTHQHA*LQICAW
Trigger: CCAGGCACAGATCTGGAGCCAGGCGTGCTGATGAGT...TCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCAGAAGAATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp TGCATGATCAGTGGTGAGGTGGAGACTTATGAGCTAGATCTATATCCACAATTTACTCATCAGCACGCCTaGCTCCAGATCTGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: CMISGEVETYELDLYPQFTHQHA*LQICAW
Trigger: CCAGGCACAGATCTGGAGCCAGGCGTGCTGATGAGT...AAATTGTGGATATAGATCTAGCTCATAAGTCTCCACCTCACCACTGATCATGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579951.2
CDS-3UTR CCA 90 bp TTGCTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCGCCAGCGCCTGGTCATaGTCAATGTCTGCATCCCCC +
Preference number: 4 (lower is better)
Translates to: LLYYGKISLPVSLLMVKVASAWS*SMSASP
Trigger: GGGGGATGCAGACATTGACCATGACCAGGCGCTGGC...GACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAGCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp CATTCGGACAGGCTCTTCCTTCGGGGACCAAAGAGGCCCACTTTTAAGACCTCACAAGGTCAATTCTTCTaGACTGAAATTTTCCACGGA +
Preference number: 4 (lower is better)
Translates to: HSDRLFLRGPKRPTFKTSQGQFF*TEIFHG
Trigger: TCCGTGGAAAATTTCAGTCCAGAAGAATTGACCTTG...TGAGGTCTTAAAAGTGGGCCTCTTTGGTCCCCGAAGGAAGAGCCTGTCCGAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637651.1
CDS-3UTR CCA 90 bp CAATTCTTCTGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGATTTCTAGCTCCTCAGTaGCAGTGGTCTCCCCGTCGG +
Preference number: 4 (lower is better)
Translates to: QFFWTEIFHGQIQVSWVRFLAPQ*QWSPRR
Trigger: CCGACGGGGAGACCACTGCCACTGAGGAGCTAGAAA...TCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCAGAAGAATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000540638.6
ENST00000545076.5
CDS-3UTR CCA 90 bp ATGAATTCTGTTGGTTTTCGCGCAGACTCTAATAAACTGAAGATTTCAGAGCCAAGCCTCCCCAGGAGCTaGGACTACAGGCACATGCCA +
Preference number: 4 (lower is better)
Translates to: MNSVGFRADSNKLKISEPSLPRS*DYRHMP
Trigger: TGGCATGTGCCTGTAGTCCCAGCTCCTGGGGAGGCT...TGGCTCTGAAATCTTCAGTTTATTAGAGTCTGCGCGAAAACCAACAGAATTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637651.1
CDS-3UTR TCA 90 bp GTGTTACATGAGACCACGGTTTATATTGTTGGTTATGAACGTGCAGGTATAGCTATAGTCTCCGAGCTCTaGCTGGACAGTGTAGGAGCC +
Preference number: 4 (lower is better)
Translates to: VLHETTVYIVGYERAGIAIVSEL*LDSVGA
Trigger: GGCTCCTACACTGTCCAGTCAGAGCTCGGAGACTAT...AGCTATACCTGCACGTTCATAACCAACAATATAAACCGTGGTCTCATGTAACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR TCA 90 bp TCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCATAACGTTTGCTGGATaGGCGTTCAAAGTAAGGTGC +
Preference number: 4 (lower is better)
Translates to: STDRYKSVGLEEGTPYRLITFAG*AFKVRC
Trigger: GCACCTTACTTTGAACGCTCATCCAGCAAACGTTAT...GAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR TCA 90 bp GGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATTCTTCTGGACCGGAGTCACAGTGGTaGTCAAGTTGGTCTGAGAGA +
Preference number: 4 (lower is better)
Translates to: GKISLPVSLLMVKVNSSGPESQW*SSWSER
Trigger: TCTCTCAGACCAACTTGATCACCACTGTGACTCCGG...TCCAGAAGAATTGACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR TCA 90 bp TCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCTTCCGTCTTCACCGTTaGGGACTCAAAATGAGGTTT +
Preference number: 4 (lower is better)
Translates to: STDRYKSVGLEEGTPYRLFRLHR*GLKMRF
Trigger: AAACCTCATTTTGAGTCCTCAACGGTGAAGACGGAA...GAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR TCA 90 bp CTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATAGTGCCAAGCCCAGGTaGCTTTCCCTCGTGCCGGAT +
Preference number: 4 (lower is better)
Translates to: LYYGKISLPVSLLMVKVNSAKPR*LSLVPD
Trigger: ATCCGGCACGAGGGAAAGTCACCTGGGCTTGGCACT...ATTGACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341928.7
CDS-3UTR TCA 90 bp GTGTTACATGAGACCACGGTTTATATTGTTGGTTATGAACGTGCAGGTATAGCTGAGGGAAGGAGAGAGTaGGAGCGTATGGCACTGAGA +
Preference number: 4 (lower is better)
Translates to: VLHETTVYIVGYERAGIAEGRRE*ERMALR
Trigger: TCTCAGTGCCATACGCTCTCACTCTCTCCTTCCCTC...AGCTATACCTGCACGTTCATAACCAACAATATAAACCGTGGTCTCATGTAACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341928.7
CDS-3UTR TCA 90 bp GTGTTACATGAGACCACGGTTTATATTGTTGGTTATGAACGTGCAGGTATAGCTCAATCCTCTGTGCCCTaGGACTCAAGGAATGGAGCG +
Preference number: 4 (lower is better)
Translates to: VLHETTVYIVGYERAGIAQSSVP*DSRNGA
Trigger: CGCTCCATTCCTTGAGTCTCAGGGCACAGAGGATTG...AGCTATACCTGCACGTTCATAACCAACAATATAAACCGTGGTCTCATGTAACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400111.8
CDS-3UTR TCA 90 bp CAATTCTTCTGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGACTGCCAGGCCGGGAATaGTCTTCATGGACTCTGGTA +
Preference number: 4 (lower is better)
Translates to: QFFWTEIFHGQIQVSWVRLPGRE*SSWTLV
Trigger: TACCAGAGTCCATGAAGATCATTCCCGGCCTGGCAG...TCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCAGAAGAATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400111.8
ENST00000637651.1
CDS-3UTR TCA 90 bp GTGTTACATGAGACCACGGTTTATATTGTTGGTTATGAACGTGCAGGTATAGCTCTGCCAGGCCGGGAATaGTCTTCATGGACTCTGGTA +
Preference number: 4 (lower is better)
Translates to: VLHETTVYIVGYERAGIALPGRE*SSWTLV
Trigger: TACCAGAGTCCATGAAGATCATTCCCGGCCTGGCAG...AGCTATACCTGCACGTTCATAACCAACAATATAAACCGTGGTCTCATGTAACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400111.8
ENST00000637651.1
CDS-3UTR TCA 90 bp AAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATCACCAGGCAGGACAATaGCTTCACTGCTCCAGTCCT +
Preference number: 4 (lower is better)
Translates to: KFSTDRYKSVGLEEGTPYHQAGQ*LHCSSP
Trigger: AGGACTGGAGCAGTGAAGTCATTGTCCTGCCTGGTG...ATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544123.5
CDS-3UTR TCA 90 bp CATTCGGACAGGCTCTTCCTTCGGGGACCAAAGAGGCCCACTTTTAAGACCTCATTCTGGAAAATTATTTaGCGAGAAGTAACCACAGAG +
Preference number: 4 (lower is better)
Translates to: HSDRLFLRGPKRPTFKTSFWKII*REVTTE
Trigger: CTCTGTGGTTACTTCTCGTCAAATAATTTTCCAGAA...TGAGGTCTTAAAAGTGGGCCTCTTTGGTCCCCGAAGGAAGAGCCTGTCCGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637651.1
CDS-3UTR GCA 90 bp ATTCGGACAGGCTCTTCCTTCGGGGACCAAAGAGGCCCACTTTTAAGACCTCACAGTATCACTTTGCACTaGATGCTTTTAGGCTTTTTG +
Preference number: 4 (lower is better)
Translates to: IRTGSSFGDQRGPLLRPHSITLH*MLLGFL
Trigger: CAAAAAGCCTAAAAGCATGCAGTGCAAAGTGATACT...GTGAGGTCTTAAAAGTGGGCCTCTTTGGTCCCCGAAGGAAGAGCCTGTCCGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000637651.1
CDS-3UTR GCA 90 bp GACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCTGGTTTCCTCTGTGGCTCTTGTaGAGCTCGATCACTTTGTCT +
Preference number: 4 (lower is better)
Translates to: DRYKSVGLEEGTPYRLWFPLWLL*SSITLS
Trigger: AGACAAAGTGATCGAGCTGCACAAGAGCCACAGAGG...AAACCAGAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp AGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCTGGTTTTCCATGCATCTCTGCTTCTaGTGGCGTCATTCCTCTGTG +
Preference number: 4 (lower is better)
Translates to: RYKSVGLEEGTPYRLWFSMHLCF*WRHSSV
Trigger: CACAGAGGAATGACGCCAGCAGAAGCAGAGATGCAT...GGAAAACCAGAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp TCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCTTTGCGCTTGTGTCCTaGCACTATAACGAAACTTGG +
Preference number: 4 (lower is better)
Translates to: STDRYKSVGLEEGTPYRLFALVS*HYNETW
Trigger: CCAAGTTTCGTTATAGTGGCAGGACACAAGCGCAAA...GAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp TCTTCTGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGCTGGCTCTTCTCGTTTaGGCTTGTGTCCTGCCACTA +
Preference number: 4 (lower is better)
Translates to: SSGLKFSTDRYKSVGLEELALLV*ACVLPL
Trigger: TAGTGGCAGGACACAAGCGCAAACGAGAAGAGCCAG...CTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCAGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp TGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACGCGTTCAAAGTAAGGTaGTGGGCGATCTATCAACGC +
Preference number: 4 (lower is better)
Translates to: WTEIFHGQIQVSWVRRGNAFKVR*WAIYQR
Trigger: GCGTTGATAGATCGCCCAGCACCTTACTTTGAACGC...GTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp CGTTGCTTCATGCATTATCGGTTTAGTGATGCTGAATCAGATTGCTTTATTATGTCAGTCTTTCCCTCGTaGCGGATGGCCGAGATGGGC +
Preference number: 4 (lower is better)
Translates to: RCFMHYRFSDAESDCFIMSVFPS*RMAEMG
Trigger: GCCCATCTCGGCCATCCGGCACGAGGGAAAGACTGA...CATAATAAAGCAATCTGATTCAGCATCACTAAACCGATAATGCATGAAGCAACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp ATTGCTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCGGCTGCGGTGTCCGTaGGCTCACTGTCAGTCTTTC +
Preference number: 4 (lower is better)
Translates to: IALLWEDLSASVFINGQGRLRCP*AHCQSF
Trigger: GAAAGACTGACAGTGAGCGCACGGACACCGCAGCCG...ACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAGCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp TCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATTCTTCTGGACTGAAATTTTCCTAAGCGGCAGGTGGTaGACGGTGGGTTCCGTCTCT +
Preference number: 4 (lower is better)
Translates to: SASVFINGQGQFFWTEIFLSGRW*TVGSVS
Trigger: AGAGACGGAACCCACCGTGCACCACCTGCCGCTTAG...GAAAATTTCAGTCCAGAAGAATTGACCTTGACCATTAATAAAGACACTGGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp CTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATCTAAGCGGCAGGTGGTaGACGGTGGGTTCCGTCTCT +
Preference number: 4 (lower is better)
Translates to: LYYGKISLPVSLLMVKVNLSGRW*TVGSVS
Trigger: AGAGACGGAACCCACCGTGCACCACCTGCCGCTTAG...ATTGACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp TGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTTTAATGCCTGTGAATaGGGGCTGTGCTGCAGCATC +
Preference number: 4 (lower is better)
Translates to: WTEIFHGQIQVSWVRRGNFNACE*GLCCSI
Trigger: GATGCTGCAGCACAGCCCGCATTCACAGGCATTAAA...GTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp AAAGCAAGATTGGAAGCATTACATATTTCCAGAGGGTCAGAGAGTCATTACTGTTGGATGGCTGCACTCTaGTCCTCTTGTCGCTCACGG +
Preference number: 4 (lower is better)
Translates to: KARLEALHISRGSESHYCWMAAL*SSCRSR
Trigger: CCGTGAGCGACAAGAGGAGCAGAGTGCAGCCATCCA...ACAGTAATGACTCTCTGACCCTCTGGAAATATGTAATGCTTCCAATCTTGCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000544123.5
ENST00000637651.1
CDS-3UTR GCA 90 bp CAATTCTTCTGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGACTGGCTCCAGATCTGTaGCTGGATCGACCTGTGATG +
Preference number: 4 (lower is better)
Translates to: QFFWTEIFHGQIQVSWVRLAPDL*LDRPVM
Trigger: CATCACAGGTCGATCCAGGCACAGATCTGGAGCCAG...TCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCAGAAGAATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp AAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATCTGGCTCCAGATCTGTaGCTGGATCGACCTGTGATG +
Preference number: 4 (lower is better)
Translates to: KFSTDRYKSVGLEEGTPYLAPDL*LDRPVM
Trigger: CATCACAGGTCGATCCAGGCACAGATCTGGAGCCAG...ATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp ATTCGGACAGGCTCTTCCTTCGGGGACCAAAGAGGCCCACTTTTAAGACCTCACATGACTGCATTCATGTaGAAGCTAAGTTATTCCTCT +
Preference number: 4 (lower is better)
Translates to: IRTGSSFGDQRGPLLRPHMTAFM*KLSYSS
Trigger: AGAGGAATAACTTAGCTTGCACATGAATGCAGTCAT...GTGAGGTCTTAAAAGTGGGCCTCTTTGGTCCCCGAAGGAAGAGCCTGTCCGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637651.1
CDS-3UTR GCA 90 bp TTCAGTGCATTTGCCATTTTTATTTCGCTATGCAGAAACATACATTCACCATGGCGGCTGCGGTGTCCGTaGGCTCACTGTCAGTCTCTT +
Preference number: 4 (lower is better)
Translates to: FSAFAIFISLCRNIHSPWRLRCP*AHCQSL
Trigger: AAGAGACTGACAGTGAGCGCACGGACACCGCAGCCG...CCATGGTGAATGTATGTTTCTGCATAGCGAAATAAAAATGGCAAATGCACTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341928.7
CDS-3UTR GCA 90 bp CTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATTCTTCTTCAGGACTCTaGCGGCGAGACTCGGCCTCC +
Preference number: 4 (lower is better)
Translates to: LYYGKISLPVSLLMVKVNSSSGL*RRDSAS
Trigger: GGAGGCCGAGTCTCGCCGGCAGAGTCCTGAAGAAGA...ATTGACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400111.8
ENST00000637651.1
CDS-3UTR GCA 90 bp GGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATTCTTCTGGAAGGGCAACTGCTACATaGAGGTCTGTGATGGGACCA +
Preference number: 4 (lower is better)
Translates to: GKISLPVSLLMVKVNSSGRATAT*RSVMGP
Trigger: TGGTCCCATCACAGACCTGCATGTAGCAGTTGCCCT...TCCAGAAGAATTGACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637651.1
CDS-3UTR CCA 90 bp GGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATTCTTCTGGAGCTCCCACATTCATCTaGGTCATAGTCTCCGAGCTC +
Preference number: 4 (lower is better)
Translates to: GKISLPVSLLMVKVNSSGAPTFI*VIVSEL
Trigger: GAGCTCGGAGACTATGACCCAGATGAATGTGGGAGC...TCCAGAAGAATTGACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp TCTTCTGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGCGCTTGGCAGCTCGATaGTTTGGCAGCTTAAACCCA +
Preference number: 4 (lower is better)
Translates to: SSGLKFSTDRYKSVGLEERLAAR*FGSLNP
Trigger: TGGGTTTAAGCTGCCAAACCATCGAGCTGCCAAGCG...CTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCAGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp TGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTTTGTTGTGGCGTACTaGCCAGTACCAACCTCTGCA +
Preference number: 4 (lower is better)
Translates to: WTEIFHGQIQVSWVRRGNFVVAY*PVPTSA
Trigger: TGCAGAGGTTGGTACTGGCCAGTACGCCACAACAAA...GTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp AAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATTCTGCATCTTCCTCCTaGTCCGACTCAGTGGCAGTG +
Preference number: 4 (lower is better)
Translates to: KFSTDRYKSVGLEEGTPYSASSS*SDSVAV
Trigger: CACTGCCACTGAGTCGGACCAGGAGGAAGATGCAGA...ATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000544123.5
ENST00000637651.1
CDS-3UTR CCA 90 bp TTGCTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCGTCGCACGGGGGAGGTaGAAAGCCTCTTCTCCCATT +
Preference number: 4 (lower is better)
Translates to: LLYYGKISLPVSLLMVKVVARGR*KASSPI
Trigger: AATGGGAGAAGAGGCTTTCCACCTCCCCCGTGCGAC...GACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAGCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp TCTTCTGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGCTCTTCAGGGACAAGTaGTTCGATCATGGGGGCATC +
Preference number: 4 (lower is better)
Translates to: SSGLKFSTDRYKSVGLEELFRDK*FDHGGI
Trigger: GATGCCCCCATGATCGAACCACTTGTCCCTGAAGAG...CTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCAGAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp AGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCTGGTTTTCCCCGTCTCTATTCCACTaGACTCCGTCTTGGTTTCCA +
Preference number: 4 (lower is better)
Translates to: RYKSVGLEEGTPYRLWFSPSLFH*TPSWFP
Trigger: TGGAAACCAAGACGGAGTCCAGTGGAATAGAGACGG...GGAAAACCAGAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp GACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCTGGTTTCCGTCTCTATTCCACTaGACTCCGTCTTGGTTTCCA +
Preference number: 4 (lower is better)
Translates to: DRYKSVGLEEGTPYRLWFPSLFH*TPSWFP
Trigger: TGGAAACCAAGACGGAGTCCAGTGGAATAGAGACGG...AAACCAGAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp TCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCTTTCTGAAATGTGGATaGCTGCACTCTGCTCCTCTT +
Preference number: 4 (lower is better)
Translates to: STDRYKSVGLEEGTPYRLFLKCG*LHSAPL
Trigger: AAGAGGAGCAGAGTGCAGCCATCCACATTTCAGAAA...GAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp TCATTGCAAGCCACAGCAGCACTATCACATCTTGGGAACAGGGAGCTGGAAATATTCGGTGTGAACTACTaGCACTTCCTTCGTGGAAAT +
Preference number: 4 (lower is better)
Translates to: SLQATAALSHLGNRELEIFGVNY*HFLRGN
Trigger: ATTTCCACGAAGGAAGTGCCAGTAGTTCACACCGAA...TATTTCCAGCTCCCTGTTCCCAAGATGTGATAGTGCTGCTGTGGCTTGCAATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637651.1
CDS-3UTR CCA 90 bp AGCAAGATTGGAAGCATTACATATTTCCAGAGGGTCAGAGAGTCATTACTGTTTACTCATCAGCACGCCTaGCTCCAGATCTGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: SKIGSITYFQRVRESLLFTHQHA*LQICAW
Trigger: CCAGGCACAGATCTGGAGCCAGGCGTGCTGATGAGT...AAACAGTAATGACTCTCTGACCCTCTGGAAATATGTAATGCTTCCAATCTTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000544123.5
ENST00000637651.1
CDS-3UTR CCA 90 bp CTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATGCCAGCGCCTGGTCATaGTCAATGTCTGCATCCCCC +
Preference number: 4 (lower is better)
Translates to: LYYGKISLPVSLLMVKVNASAWS*SMSASP
Trigger: GGGGGATGCAGACATTGACCATGACCAGGCGCTGGC...ATTGACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp TTGCTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCGATGTGGGGGCACAATaGGTGGATGGGGGTGACAAG +
Preference number: 4 (lower is better)
Translates to: LLYYGKISLPVSLLMVKVDVGAQ*VDGGDK
Trigger: CTTGTCACCCCCATCCACCCATTGTGCCCCCACATC...GACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAGCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000341928.7
CDS-3UTR CCA 90 bp TCTTCTGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGAGAAGGAGAACAGGGTaGTCCCCTTGCCAGTTTGCT +
Preference number: 4 (lower is better)
Translates to: SSGLKFSTDRYKSVGLEERRRTG*SPCQFA
Trigger: AGCAAACTGGCAAGGGGACCACCCTGTTCTCCTTCT...CTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCAGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341928.7
CDS-3UTR CCA 90 bp TCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCCCTTCTGAGTCCTTCTaGTTTTCAGCATCTCGATAC +
Preference number: 4 (lower is better)
Translates to: STDRYKSVGLEEGTPYRLPSESF*FSASRY
Trigger: GTATCGAGATGCTGAAAACCAGAAGGACTCAGAAGG...GAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400111.8
CDS-3UTR CCA 90 bp GGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATTCTTCTGGACCTCTGGTCCTCTCTTaGATTTCTCATCAGCGAGGG +
Preference number: 4 (lower is better)
Translates to: GKISLPVSLLMVKVNSSGPLVLS*ISHQRG
Trigger: CCCTCGCTGATGAGAAATCCAAGAGAGGACCAGAGG...TCCAGAAGAATTGACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400111.8
ENST00000637651.1
CDS-3UTR CCA 90 bp GACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCTGGTTTATCTGTCCTTGCCTGTaGCATCCCGTTCTATGCGAA +
Preference number: 4 (lower is better)
Translates to: DRYKSVGLEEGTPYRLWFICPCL*HPVLCE
Trigger: TTCGCATAGAACGGGATGCCACAGGCAAGGACAGAT...AAACCAGAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545076.5
CDS-3UTR CCA 90 bp TTGCTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCCCTCCTGGTCCGGCTTaGATTCCGAGTCAAGACCAG +
Preference number: 4 (lower is better)
Translates to: LLYYGKISLPVSLLMVKVPPGPA*IPSQDQ
Trigger: CTGGTCTTGACTCGGAATCCAAGCCGGACCAGGAGG...GACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545076.5
CDS-3UTR TCA 90 bp TCTTCTGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGTTCGGTCGTCATGGTTaGTTGTTCTGGGATCAGCAG +
Preference number: 4 (lower is better)
Translates to: SSGLKFSTDRYKSVGLEEFGRHG*LFWDQQ
Trigger: CTGCTGATCCCAGAACAATCAACCATGACGACCGAA...CTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCAGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
CDS-3UTR TCA 90 bp TCTTCTGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGCTTGGATTCCGAGTCTaGTCCAGATTCGGTCGTCAT +
Preference number: 4 (lower is better)
Translates to: SSGLKFSTDRYKSVGLEELGFRV*SRFGRH
Trigger: ATGACGACCGAATCTGGATCAGACTCGGAATCCAAG...CTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCAGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
CDS-3UTR TCA 90 bp AAAGCAAGATTGGAAGCATTACATATTTCCAGAGGGTCAGAGAGTCATTACTGTATAGTCTCCGAGCTCTaGCTGGACAGTGTAGGAGCC +
Preference number: 4 (lower is better)
Translates to: KARLEALHISRGSESHYCIVSEL*LDSVGA
Trigger: GGCTCCTACACTGTCCAGTCAGAGCTCGGAGACTAT...ACAGTAATGACTCTCTGACCCTCTGGAAATATGTAATGCTTCCAATCTTGCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000544123.5
ENST00000637651.1
CDS-3UTR TCA 90 bp CAAAGCAAGATTGGAAGCATTACATATTTCCAGAGGGTCAGAGAGTCATTACTGCCGGAGTCACAGTGGTaGTCAAGTTGGTCTGAGAGA +
Preference number: 4 (lower is better)
Translates to: QSKIGSITYFQRVRESLLPESQW*SSWSER
Trigger: TCTCTCAGACCAACTTGATCACCACTGTGACTCCGG...CAGTAATGACTCTCTGACCCTCTGGAAATATGTAATGCTTCCAATCTTGCTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000544123.5
ENST00000637651.1
CDS-3UTR TCA 90 bp GACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCTGGTTTTTTCAGAGCCATCCATaGGCTTTTCCCCAGAAGACT +
Preference number: 4 (lower is better)
Translates to: DRYKSVGLEEGTPYRLWFFQSHP*AFPQKT
Trigger: AGTCTTCTGGGGAAAAGCTCATGGATGGCTCTGAAA...AAACCAGAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000544123.5
ENST00000637651.1
CDS-3UTR TCA 90 bp TCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCTTGTTCCAAAGTTTCTaGAATGTGGATGGCTGCACT +
Preference number: 4 (lower is better)
Translates to: STDRYKSVGLEEGTPYRLLFQSF*NVDGCT
Trigger: AGTGCAGCCATCCACATTTCAGAAACTTTGGAACAA...GAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR TCA 90 bp GACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCTGGTTTAAACACTGCCAAAACTaGTGGTTTCCGTCTTCACCG +
Preference number: 4 (lower is better)
Translates to: DRYKSVGLEEGTPYRLWFKHCQN*WFPSSP
Trigger: CGGTGAAGACGGAAACCATCAGTTTTGGCAGTGTTT...AAACCAGAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR TCA 90 bp GAACTCCATATAGGCTCTGGTTTTCCTAACGGTTTGCATGACTGCATTCATGTGAAACACTGCCAAAACTaGTGGTTTCCGTCTTCACCG +
Preference number: 4 (lower is better)
Translates to: ELHIGSGFPNGLHDCIHVKHCQN*WFPSSP
Trigger: CGGTGAAGACGGAAACCATCAGTTTTGGCAGTGTTT...CACATGAATGCAGTCATGCAAACCGTTAGGAAAACCAGAGCCTATATGGAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR TCA 90 bp GAACTCCATATAGGCTCTGGTTTTCCTAACGGTTTGCATGACTGCATTCATGTGCTTTACTCCTCCCGGTaGAACACTGCCAAAACTGAT +
Preference number: 4 (lower is better)
Translates to: ELHIGSGFPNGLHDCIHVLYSSR*NTAKTD
Trigger: ATCAGTTTTGGCAGTGTTTCACCGGGAGGAGTAAAG...CACATGAATGCAGTCATGCAAACCGTTAGGAAAACCAGAGCCTATATGGAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR TCA 90 bp TGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACGTTTTGGTTTCGGTGTaGACTACTGGCACTTCCTTC +
Preference number: 4 (lower is better)
Translates to: WTEIFHGQIQVSWVRRGNVLVSV*TTGTSF
Trigger: GAAGGAAGTGCCAGTAGTTCACACCGAAACCAAAAC...GTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR TCA 90 bp AGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCTGGTTTTCCGTTTTGGTTTCGGTGTaGACTACTGGCACTTCCTTC +
Preference number: 4 (lower is better)
Translates to: RYKSVGLEEGTPYRLWFSVLVSV*TTGTSF
Trigger: GAAGGAAGTGCCAGTAGTTCACACCGAAACCAAAAC...GGAAAACCAGAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR TCA 90 bp CTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATGCCTCTTTAATTGCCTaGGCCAGCGCCTGGTCATGG +
Preference number: 4 (lower is better)
Translates to: LYYGKISLPVSLLMVKVNASLIA*ASAWSW
Trigger: CCATGACCAGGCGCTGGCTCAGGCAATTAAAGAGGC...ATTGACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000545076.5
ENST00000637651.1
CDS-3UTR TCA 90 bp TCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATTCTTCTGGACTGAAATTTTCGCCTCTTTAATTGCCTaGGCCAGCGCCTGGTCATGG +
Preference number: 4 (lower is better)
Translates to: SASVFINGQGQFFWTEIFASLIA*ASAWSW
Trigger: CCATGACCAGGCGCTGGCTCAGGCAATTAAAGAGGC...GAAAATTTCAGTCCAGAAGAATTGACCTTGACCATTAATAAAGACACTGGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000545076.5
ENST00000637651.1
CDS-3UTR TCA 90 bp TCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCACGTGCAGGTATAGCTaGAAACTGAGACATTTTGTG +
Preference number: 4 (lower is better)
Translates to: STDRYKSVGLEEGTPYRLTCRYS*KLRHFV
Trigger: CACAAAATGTCTCAGTTTTCAGCTATACCTGCACGT...GAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR TCA 90 bp TCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCTTAAGCTCTCTGGATTaGACACAGACCAAAGCAAAC +
Preference number: 4 (lower is better)
Translates to: STDRYKSVGLEEGTPYRLLSSLD*TQTKAN
Trigger: GTTTGCTTTGGTCTGTGTTCAATCCAGAGAGCTTAA...GAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000544123.5
ENST00000637651.1
CDS-3UTR TCA 90 bp GGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATTCTTCTGGAGTCAGTCTCTTCCTCTaGACTGTCACTCGGGTCATT +
Preference number: 4 (lower is better)
Translates to: GKISLPVSLLMVKVNSSGVSLFL*TVTRVI
Trigger: AATGACCCGAGTGACAGTTCAGAGGAAGAGACTGAC...TCCAGAAGAATTGACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341928.7
CDS-3UTR TCA 90 bp AAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATGCTGTGGAGCCTTCTTaGGGTCATCTTCTTCAGGAC +
Preference number: 4 (lower is better)
Translates to: KFSTDRYKSVGLEEGTPYAVEPS*GHLLQD
Trigger: GTCCTGAAGAAGATGACCTCAAGAAGGCTCCACAGC...ATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400111.8
ENST00000637651.1
CDS-3UTR TCA 90 bp AGCAAGATTGGAAGCATTACATATTTCCAGAGGGTCAGAGAGTCATTACTGTTTTACTCGGGAGGCGGATaGCTCAGTAACGTAATGGGC +
Preference number: 4 (lower is better)
Translates to: SKIGSITYFQRVRESLLFYSGGG*LSNVMG
Trigger: GCCCATTACGTTACTGAGTCATCCGCCTCCCGAGTA...AAACAGTAATGACTCTCTGACCCTCTGGAAATATGTAATGCTTCCAATCTTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400111.8
ENST00000637651.1
CDS-3UTR TCA 90 bp AAAGCAAGATTGGAAGCATTACATATTTCCAGAGGGTCAGAGAGTCATTACTGTTACTCGGGAGGCGGATaGCTCAGTAACGTAATGGGC +
Preference number: 4 (lower is better)
Translates to: KARLEALHISRGSESHYCYSGGG*LSNVMG
Trigger: GCCCATTACGTTACTGAGTCATCCGCCTCCCGAGTA...ACAGTAATGACTCTCTGACCCTCTGGAAATATGTAATGCTTCCAATCTTGCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400111.8
ENST00000637651.1
CDS-3UTR TCA 90 bp ACACTTTATCAAACAGCACTTGTCCTCTGGAGCGTTTCTCTACATCACAGGTATCCTGTTCCTTGTCAGTaGCATTTTCATCTGCCTGGG +
Preference number: 4 (lower is better)
Translates to: TLYQTALVLWSVSLHHRYPVPCQ*HFHLPG
Trigger: CCCAGGCAGATGAAAATGTCACTGACAAGGAACAGG...ATACCTGTGATGTAGAGAAACGCTCCAGAGGACAAGTGCTGTTTGATAAAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580866.2
CDS-3UTR GCA 90 bp GTCCTCTGGAGCGTTTCTCTACATCACAGGTATATTCTGATCCATCGAGAAGTAATATTCGAGCTGTTTTaGAGCCCTGGCAGCAAACTC +
Preference number: 4 (lower is better)
Translates to: VLWSVSLHHRYILIHREVIFELF*SPGSKL
Trigger: GAGTTTGCTGCCAGGGCTGCAAAACAGCTCGAATAT...TACTTCTCGATGGATCAGAATATACCTGTGATGTAGAGAAACGCTCCAGAGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580866.2
CDS-3UTR GCA 90 bp TCTTCTGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGCCTCTGTGGCTCTTGTaGAGCTCGATCACTTTGTCT +
Preference number: 4 (lower is better)
Translates to: SSGLKFSTDRYKSVGLEEPLWLL*SSITLS
Trigger: AGACAAAGTGATCGAGCTGCACAAGAGCCACAGAGG...CTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCAGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp AAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATCTGGCTCTTCTCGTTTaGGCTTGTGTCCTGCCACTA +
Preference number: 4 (lower is better)
Translates to: KFSTDRYKSVGLEEGTPYLALLV*ACVLPL
Trigger: TAGTGGCAGGACACAAGCGCAAACGAGAAGAGCCAG...ATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp GGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATTCTTCTGGAGCGTTCAAAGTAAGGTaGTGGGCGATCTATCAACGC +
Preference number: 4 (lower is better)
Translates to: GKISLPVSLLMVKVNSSGAFKVR*WAIYQR
Trigger: GCGTTGATAGATCGCCCAGCACCTTACTTTGAACGC...TCCAGAAGAATTGACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp TCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATTCTTCTGGACTGAAATTTTCTGGATGGCTGCACTCTaGTCCTCTTGTCGCTCACGG +
Preference number: 4 (lower is better)
Translates to: SASVFINGQGQFFWTEIFWMAAL*SSCRSR
Trigger: CCGTGAGCGACAAGAGGAGCAGAGTGCAGCCATCCA...GAAAATTTCAGTCCAGAAGAATTGACCTTGACCATTAATAAAGACACTGGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp AAAGCAAGATTGGAAGCATTACATATTTCCAGAGGGTCAGAGAGTCATTACTGTCTGGCTCCAGATCTGTaGCTGGATCGACCTGTGATG +
Preference number: 4 (lower is better)
Translates to: KARLEALHISRGSESHYCLAPDL*LDRPVM
Trigger: CATCACAGGTCGATCCAGGCACAGATCTGGAGCCAG...ACAGTAATGACTCTCTGACCCTCTGGAAATATGTAATGCTTCCAATCTTGCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000544123.5
ENST00000637651.1
CDS-3UTR GCA 90 bp TCATTGCAAGCCACAGCAGCACTATCACATCTTGGGAACAGGGAGCTGGAAATATTCTTGTCTCTGAAATaGCCCCTTTCACAGTTTTGG +
Preference number: 4 (lower is better)
Translates to: SLQATAALSHLGNRELEIFLSLK*PLSQFW
Trigger: CCAAAACTGTGAAAGGGGGCATTTCAGAGACAAGAA...TATTTCCAGCTCCCTGTTCCCAAGATGTGATAGTGCTGCTGTGGCTTGCAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637651.1
CDS-3UTR GCA 90 bp GGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATTCTTCTGGAAATGACTCAGGGAGCTaGAAGGAGAAGGAGAACAGG +
Preference number: 4 (lower is better)
Translates to: GKISLPVSLLMVKVNSSGNDSGS*KEKENR
Trigger: CCTGTTCTCCTTCTCCTTGCAGCTCCCTGAGTCATT...TCCAGAAGAATTGACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341928.7
CDS-3UTR GCA 90 bp TCCTCTCCATCTTCTGGTGTGATCTCTGTCTCTTTATGGACCACTACTTTGGTCGAAAATCAGGGCAACTaGTACATGCAGGTCTGTGAT +
Preference number: 4 (lower is better)
Translates to: SSPSSGVISVSLWTTTLVENQGN*YMQVCD
Trigger: ATCACAGACCTGCATGTAGCAGTTGCCCTGATTTTC...GACCAAAGTAGTGGTCCATAAAGAGACAGAGATCACACCAGAAGATGGAGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637651.1
CDS-3UTR GCA 90 bp ACCCTCTTTAGCTTTCCCAGTCATAGTAACAATTCTCCCGGAGACAGTGTCATAAGAAGCTGGGTTGGCTaGTCTCAACATAAAGCCAAG +
Preference number: 4 (lower is better)
Translates to: TLFSFPSHSNNSPGDSVIRSWVG*SQHKAK
Trigger: CTTGGCTTTATGTTGAGAGCAGCCAACCCAGCTTCT...TATGACACTGTCTCCGGGAGAATTGTTACTATGACTGGGAAAGCTAAAGAGGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637651.1
CDS-3UTR CCA 90 bp TTCAGTGCATTTGCCATTTTTATTTCGCTATGCAGAAACATACATTCACCATGGCCTCCTGGTCCGGCTTaGATTCCGAGTCTGATCCAG +
Preference number: 4 (lower is better)
Translates to: FSAFAIFISLCRNIHSPWPPGPA*IPSLIQ
Trigger: CTGGATCAGACTCGGAATCCAAGCCGGACCAGGAGG...CCATGGTGAATGTATGTTTCTGCATAGCGAAATAAAAATGGCAAATGCACTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000544123.5
CDS-3UTR CCA 90 bp CTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATCCTCCTGGTCCGGCTTaGATTCCGAGTCTGATCCAG +
Preference number: 4 (lower is better)
Translates to: LYYGKISLPVSLLMVKVNPPGPA*IPSLIQ
Trigger: CTGGATCAGACTCGGAATCCAAGCCGGACCAGGAGG...ATTGACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
CDS-3UTR CCA 90 bp TCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCTTCTTTAGTGTGGTTTaGTGCAAAGCGGAACTCACT +
Preference number: 4 (lower is better)
Translates to: STDRYKSVGLEEGTPYRLFFSVV*CKAELT
Trigger: AGTGAGTTCCGCTTTGCACCAAACCACACTAAAGAA...GAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp CAAAGCAAGATTGGAAGCATTACATATTTCCAGAGGGTCAGAGAGTCATTACTGCATCTCTGCTTCTGCTaGCGTCATTCCTCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: QSKIGSITYFQRVRESLLHLCFC*RHSSVA
Trigger: AGCCACAGAGGAATGACGCCAGCAGAAGCAGAGATG...CAGTAATGACTCTCTGACCCTCTGGAAATATGTAATGCTTCCAATCTTGCTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000544123.5
ENST00000637651.1
CDS-3UTR CCA 90 bp CAATTCTTCTGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGACGCTTGGCAGCTCGATaGTTTGGCAGCTTAAACCCA +
Preference number: 4 (lower is better)
Translates to: QFFWTEIFHGQIQVSWVRRLAAR*FGSLNP
Trigger: TGGGTTTAAGCTGCCAAACCATCGAGCTGCCAAGCG...TCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCAGAAGAATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp CAAAGCAAGATTGGAAGCATTACATATTTCCAGAGGGTCAGAGAGTCATTACTGCGCTTGGCAGCTCGATaGTTTGGCAGCTTAAACCCA +
Preference number: 4 (lower is better)
Translates to: QSKIGSITYFQRVRESLLRLAAR*FGSLNP
Trigger: TGGGTTTAAGCTGCCAAACCATCGAGCTGCCAAGCG...CAGTAATGACTCTCTGACCCTCTGGAAATATGTAATGCTTCCAATCTTGCTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000544123.5
ENST00000637651.1
CDS-3UTR CCA 90 bp TGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACCTTTCCATAAACGCTTaGCAGCTCGATGGTTTGGCA +
Preference number: 4 (lower is better)
Translates to: WTEIFHGQIQVSWVRRGNLSINA*QLDGLA
Trigger: TGCCAAACCATCGAGCTGCCAAGCGTTTATGGAAAG...GTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp GAACTCCATATAGGCTCTGGTTTTCCTAACGGTTTGCATGACTGCATTCATGTGGATCTATCAACGCACTaGCTCTTCTCGTTTGCGCTT +
Preference number: 4 (lower is better)
Translates to: ELHIGSGFPNGLHDCIHVDLSTH*LFSFAL
Trigger: AAGCGCAAACGAGAAGAGCCAGTGCGTTGATAGATC...CACATGAATGCAGTCATGCAAACCGTTAGGAAAACCAGAGCCTATATGGAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp GGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATTCTTCTGGATTTGTTGTGGCGTACTaGCCAGTACCAACCTCTGCA +
Preference number: 4 (lower is better)
Translates to: GKISLPVSLLMVKVNSSGFVVAY*PVPTSA
Trigger: TGCAGAGGTTGGTACTGGCCAGTACGCCACAACAAA...TCCAGAAGAATTGACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp AGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCTGGTTTTCCAGATGCCTTTTGTTGTaGCGTACTGGCCAGTACCAA +
Preference number: 4 (lower is better)
Translates to: RYKSVGLEEGTPYRLWFSRCLLL*RTGQYQ
Trigger: TTGGTACTGGCCAGTACGCCACAACAAAAGGCATCT...GGAAAACCAGAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp GACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCTGGTTTAGATGCCTTTTGTTGTaGCGTACTGGCCAGTACCAA +
Preference number: 4 (lower is better)
Translates to: DRYKSVGLEEGTPYRLWFRCLLL*RTGQYQ
Trigger: TTGGTACTGGCCAGTACGCCACAACAAAAGGCATCT...AAACCAGAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp GTTGCTTCATGCATTATCGGTTTAGTGATGCTGAATCAGATTGCTTTATTATGGGTCGCACGGGGGAGGTaGAAAGCCTCTTCTCCCATT +
Preference number: 4 (lower is better)
Translates to: VASCIIGLVMLNQIALLWVARGR*KASSPI
Trigger: AATGGGAGAAGAGGCTTTCCACCTCCCCCGTGCGAC...CCATAATAAAGCAATCTGATTCAGCATCACTAAACCGATAATGCATGAAGCAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp TTCAGTGCATTTGCCATTTTTATTTCGCTATGCAGAAACATACATTCACCATGGCAAGTGGTTCGATCATaGGGGCATCCTCCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: FSAFAIFISLCRNIHSPWQVVRS*GHPPAW
Trigger: CCAGGCAGGAGGATGCCCCCATGATCGAACCACTTG...CCATGGTGAATGTATGTTTCTGCATAGCGAAATAAAAATGGCAAATGCACTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000544123.5
CDS-3UTR CCA 90 bp GTTGCTTCATGCATTATCGGTTTAGTGATGCTGAATCAGATTGCTTTATTATGGCAAGTGGTTCGATCATaGGGGCATCCTCCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: VASCIIGLVMLNQIALLWQVVRS*GHPPAW
Trigger: CCAGGCAGGAGGATGCCCCCATGATCGAACCACTTG...CCATAATAAAGCAATCTGATTCAGCATCACTAAACCGATAATGCATGAAGCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp CTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATCAAGTGGTTCGATCATaGGGGCATCCTCCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: LYYGKISLPVSLLMVKVNQVVRS*GHPPAW
Trigger: CCAGGCAGGAGGATGCCCCCATGATCGAACCACTTG...ATTGACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp CAATTCTTCTGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGACTCTTCAGGGACAAGTaGTTCGATCATGGGGGCATC +
Preference number: 4 (lower is better)
Translates to: QFFWTEIFHGQIQVSWVRLFRDK*FDHGGI
Trigger: GATGCCCCCATGATCGAACCACTTGTCCCTGAAGAG...TCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCAGAAGAATTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp AAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATCTCTTCAGGGACAAGTaGTTCGATCATGGGGGCATC +
Preference number: 4 (lower is better)
Translates to: KFSTDRYKSVGLEEGTPYLFRDK*FDHGGI
Trigger: GATGCCCCCATGATCGAACCACTTGTCCCTGAAGAG...ATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp TCTTCTGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGCCGTCTCTATTCCACTaGACTCCGTCTTGGTTTCCA +
Preference number: 4 (lower is better)
Translates to: SSGLKFSTDRYKSVGLEEPSLFH*TPSWFP
Trigger: TGGAAACCAAGACGGAGTCCAGTGGAATAGAGACGG...CTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCAGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp TCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATTCTTCTGGACTGAAATTTTCGCAGGTGGTGCACGGTaGGTTCCGTCTCTATTCCAC +
Preference number: 4 (lower is better)
Translates to: SASVFINGQGQFFWTEIFAGGAR*VPSLFH
Trigger: GTGGAATAGAGACGGAACCCACCGTGCACCACCTGC...GAAAATTTCAGTCCAGAAGAATTGACCTTGACCATTAATAAAGACACTGGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp CGTTGCTTCATGCATTATCGGTTTAGTGATGCTGAATCAGATTGCTTTATTATGGCAGGTGGTGCACGGTaGGTTCCGTCTCTATTCCAC +
Preference number: 4 (lower is better)
Translates to: RCFMHYRFSDAESDCFIMAGGAR*VPSLFH
Trigger: GTGGAATAGAGACGGAACCCACCGTGCACCACCTGC...CATAATAAAGCAATCTGATTCAGCATCACTAAACCGATAATGCATGAAGCAACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp ATTGCTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTACTCATCAGCACGCCTaGCTCCAGATCTGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: IALLWEDLSASVFINGQGTHQHA*LQICAW
Trigger: CCAGGCACAGATCTGGAGCCAGGCGTGCTGATGAGT...ACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAGCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp CAATTCTTCTGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAATGCTTCAGATGGTCTaGTTTTGCCTGCCCCACCCT +
Preference number: 4 (lower is better)
Translates to: QFFWTEIFHGQIQVSWVRMLQMV*FCLPHP
Trigger: AGGGTGGGGCAGGCAAAACCAGACCATCTGAAGCAT...TCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCAGAAGAATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000544123.5
CDS-3UTR CCA 90 bp GTTGCTTCATGCATTATCGGTTTAGTGATGCTGAATCAGATTGCTTTATTATGGCCTCCTGGTCCGGCTTaGATTCCGAGTCTGAGTCAC +
Preference number: 4 (lower is better)
Translates to: VASCIIGLVMLNQIALLWPPGPA*IPSLSH
Trigger: GTGACTCAGACTCGGAATCCAAGCCGGACCAGGAGG...CCATAATAAAGCAATCTGATTCAGCATCACTAAACCGATAATGCATGAAGCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637651.1
3UTR CAA 72 bp GTTTATCGTCTTCTAATTGCTGATATTCGAGCTGTTTaGCAGCCCTGGCAGCAAACTCCTGTTCCTTGTCAG +
Preference number: 4 (lower is better)
Translates to: VYRLLIADIRAV*QPWQQTPVPCQ
Trigger: CTGACAAGGAACAGGAGTTTGCTGCCAGGGCTGCAAAACAGCTCGAATATCAGCAATTAGAAGACGATAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580866.2
CDS-3UTR TCA 90 bp CAATTCTTCTGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGATTCGGTCGTCATGGTTaGTTGTTCTGGGATCAGCAG +
Preference number: 4 (lower is better)
Translates to: QFFWTEIFHGQIQVSWVRFGRHG*LFWDQQ
Trigger: CTGCTGATCCCAGAACAATCAACCATGACGACCGAA...TCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCAGAAGAATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
CDS-3UTR TCA 90 bp TCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCTCGTCTTCTAATTGCTaGTATTCGAGCTGTTTTGCA +
Preference number: 4 (lower is better)
Translates to: STDRYKSVGLEEGTPYRLSSSNC*YSSCFA
Trigger: TGCAAAACAGCTCGAATATCAGCAATTAGAAGACGA...GAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR TCA 90 bp GTTGCTTCATGCATTATCGGTTTAGTGATGCTGAATCAGATTGCTTTATTATGGATAGTCTCCGAGCTCTaGCTGGACAGTGTAGGAGCC +
Preference number: 4 (lower is better)
Translates to: VASCIIGLVMLNQIALLWIVSEL*LDSVGA
Trigger: GGCTCCTACACTGTCCAGTCAGAGCTCGGAGACTAT...CCATAATAAAGCAATCTGATTCAGCATCACTAAACCGATAATGCATGAAGCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR TCA 90 bp TGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACATAACGTTTGCTGGATaGGCGTTCAAAGTAAGGTGC +
Preference number: 4 (lower is better)
Translates to: WTEIFHGQIQVSWVRRGNITFAG*AFKVRC
Trigger: GCACCTTACTTTGAACGCTCATCCAGCAAACGTTAT...GTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR TCA 90 bp GACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCTGGTTTATAACGTTTGCTGGATaGGCGTTCAAAGTAAGGTGC +
Preference number: 4 (lower is better)
Translates to: DRYKSVGLEEGTPYRLWFITFAG*AFKVRC
Trigger: GCACCTTACTTTGAACGCTCATCCAGCAAACGTTAT...AAACCAGAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR TCA 90 bp TCTTCTGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGTTTCAGAGCCATCCATaGGCTTTTCCCCAGAAGACT +
Preference number: 4 (lower is better)
Translates to: SSGLKFSTDRYKSVGLEEFQSHP*AFPQKT
Trigger: AGTCTTCTGGGGAAAAGCTCATGGATGGCTCTGAAA...CTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCAGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000544123.5
ENST00000637651.1
CDS-3UTR TCA 90 bp AGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCTGGTTTTCCTTCCGTCTTCACCGTTaGGGACTCAAAATGAGGTTT +
Preference number: 4 (lower is better)
Translates to: RYKSVGLEEGTPYRLWFSFRLHR*GLKMRF
Trigger: AAACCTCATTTTGAGTCCTCAACGGTGAAGACGGAA...GGAAAACCAGAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR TCA 90 bp TCTTCTGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGAAACACTGCCAAAACTaGTGGTTTCCGTCTTCACCG +
Preference number: 4 (lower is better)
Translates to: SSGLKFSTDRYKSVGLEEKHCQN*WFPSSP
Trigger: CGGTGAAGACGGAAACCATCAGTTTTGGCAGTGTTT...CTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCAGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR TCA 90 bp GGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATTCTTCTGGACTTTACTCCTCCCGGTaGAACACTGCCAAAACTGAT +
Preference number: 4 (lower is better)
Translates to: GKISLPVSLLMVKVNSSGLYSSR*NTAKTD
Trigger: ATCAGTTTTGGCAGTGTTTCACCGGGAGGAGTAAAG...TCCAGAAGAATTGACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR TCA 90 bp TCTTCTGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGTTTTGGTTTCGGTGTaGACTACTGGCACTTCCTTC +
Preference number: 4 (lower is better)
Translates to: SSGLKFSTDRYKSVGLEEVLVSV*TTGTSF
Trigger: GAAGGAAGTGCCAGTAGTTCACACCGAAACCAAAAC...CTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCAGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR TCA 90 bp GACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCTGGTTTCTCCATCTTCTGGTGTaGTCTCTGTCTCTTTATGGA +
Preference number: 4 (lower is better)
Translates to: DRYKSVGLEEGTPYRLWFLHLLV*SLSLYG
Trigger: TCCATAAAGAGACAGAGATCACACCAGAAGATGGAG...AAACCAGAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000545076.5
ENST00000637651.1
CDS-3UTR TCA 90 bp AGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCTGGTTTTCCCTCCATCTTCTGGTGTaGTCTCTGTCTCTTTATGGA +
Preference number: 4 (lower is better)
Translates to: RYKSVGLEEGTPYRLWFSLHLLV*SLSLYG
Trigger: TCCATAAAGAGACAGAGATCACACCAGAAGATGGAG...GGAAAACCAGAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000545076.5
ENST00000637651.1
CDS-3UTR TCA 90 bp GACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCTGGTTTTTGGCACATCTAATCTaGGGAAAATCTGACACACCG +
Preference number: 4 (lower is better)
Translates to: DRYKSVGLEEGTPYRLWFLAHLI*GKSDTP
Trigger: CGGTGTGTCAGATTTTCCTCAGATTAGATGTGCCAA...AAACCAGAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000544123.5
ENST00000637651.1
CDS-3UTR TCA 90 bp GAACTCCATATAGGCTCTGGTTTTCCTAACGGTTTGCATGACTGCATTCATGTGCACCCTTGTTTCCTTTaGGCCATAGTGATGTCACAA +
Preference number: 4 (lower is better)
Translates to: ELHIGSGFPNGLHDCIHVHPCFL*AIVMSQ
Trigger: TTGTGACATCACTATGGCTCAAAGGAAACAAGGGTG...CACATGAATGCAGTCATGCAAACCGTTAGGAAAACCAGAGCCTATATGGAGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544123.5
CDS-3UTR TCA 90 bp AAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATCAAACCAGGAGCAGGTaGGTGCCCTGGTTTACATTT +
Preference number: 4 (lower is better)
Translates to: KFSTDRYKSVGLEEGTPYQTRSR*VPWFTF
Trigger: AAATGTAAACCAGGGCACTCACCTGCTCCTGGTTTG...ATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637651.1
CDS-3UTR GCA 90 bp AAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATATGCATCTCTGCTTCTaGTGGCGTCATTCCTCTGTG +
Preference number: 4 (lower is better)
Translates to: KFSTDRYKSVGLEEGTPYMHLCF*WRHSSV
Trigger: CACAGAGGAATGACGCCAGCAGAAGCAGAGATGCAT...ATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp TCTTCTGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGCAAGAAATGCATCTCTaGTTCTGCTGGCGTCATTCC +
Preference number: 4 (lower is better)
Translates to: SSGLKFSTDRYKSVGLEEQEMHL*FCWRHS
Trigger: GGAATGACGCCAGCAGAAGCAGAGATGCATTTCTTG...CTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCAGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp CAAAGCAAGATTGGAAGCATTACATATTTCCAGAGGGTCAGAGAGTCATTACTGGCGTTCAAAGTAAGGTaGTGGGCGATCTATCAACGC +
Preference number: 4 (lower is better)
Translates to: QSKIGSITYFQRVRESLLAFKVR*WAIYQR
Trigger: GCGTTGATAGATCGCCCAGCACCTTACTTTGAACGC...CAGTAATGACTCTCTGACCCTCTGGAAATATGTAATGCTTCCAATCTTGCTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000544123.5
ENST00000637651.1
CDS-3UTR GCA 90 bp TCTTCTGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGCCAGTACCAACCTCTaGAGCAGACATAGAATCCTT +
Preference number: 4 (lower is better)
Translates to: SSGLKFSTDRYKSVGLEEASTNL*SRHRIL
Trigger: AAGGATTCTATGTCTGCTGCAGAGGTTGGTACTGGC...CTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCAGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp GAACTCCATATAGGCTCTGGTTTTCCTAACGGTTTGCATGACTGCATTCATGTGTTTTCCCCAGAAGACTaGTTAGTCTCTTCAGGGACA +
Preference number: 4 (lower is better)
Translates to: ELHIGSGFPNGLHDCIHVFSPED*LVSSGT
Trigger: TGTCCCTGAAGAGACTAAGCAGTCTTCTGGGGAAAA...CACATGAATGCAGTCATGCAAACCGTTAGGAAAACCAGAGCCTATATGGAGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000544123.5
CDS-3UTR GCA 90 bp AAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATTTTAATGCCTGTGAATaGGGGCTGTGCTGCAGCATC +
Preference number: 4 (lower is better)
Translates to: KFSTDRYKSVGLEEGTPYFNACE*GLCCSI
Trigger: GATGCTGCAGCACAGCCCGCATTCACAGGCATTAAA...ATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp GTGTTACATGAGACCACGGTTTATATTGTTGGTTATGAACGTGCAGGTATAGCTTTTAATGCCTGTGAATaGGGGCTGTGCTGCAGCATC +
Preference number: 4 (lower is better)
Translates to: VLHETTVYIVGYERAGIAFNACE*GLCCSI
Trigger: GATGCTGCAGCACAGCCCGCATTCACAGGCATTAAA...AGCTATACCTGCACGTTCATAACCAACAATATAAACCGTGGTCTCATGTAACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp TCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATTCTTCTGGACTGAAATTTTCCTGGCTCCAGATCTGTaGCTGGATCGACCTGTGATG +
Preference number: 4 (lower is better)
Translates to: SASVFINGQGQFFWTEIFLAPDL*LDRPVM
Trigger: CATCACAGGTCGATCCAGGCACAGATCTGGAGCCAG...GAAAATTTCAGTCCAGAAGAATTGACCTTGACCATTAATAAAGACACTGGCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp GAGGTGGAGACTTATGAGCTAGATCTATATCCACAATTTACAAATGAGGTACAACTGGCTCCAGATCTGTaGCTGGATCGACCTGTGATG +
Preference number: 4 (lower is better)
Translates to: EVETYELDLYPQFTNEVQLAPDL*LDRPVM
Trigger: CATCACAGGTCGATCCAGGCACAGATCTGGAGCCAG...TTGTACCTCATTTGTAAATTGTGGATATAGATCTAGCTCATAAGTCTCCACCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579951.2
CDS-3UTR GCA 90 bp TTGCTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCAGATGTGATCGTCTGTaGACTCATCAGCACGCCTGG +
Preference number: 4 (lower is better)
Translates to: LLYYGKISLPVSLLMVKVRCDRL*THQHAW
Trigger: CCAGGCGTGCTGATGAGTGCACAGACGATCACATCT...GACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp AAAGCAAGATTGGAAGCATTACATATTTCCAGAGGGTCAGAGAGTCATTACTGTAGATGTGATCGTCTGTaGACTCATCAGCACGCCTGG +
Preference number: 4 (lower is better)
Translates to: KARLEALHISRGSESHYCRCDRL*THQHAW
Trigger: CCAGGCGTGCTGATGAGTGCACAGACGATCACATCT...ACAGTAATGACTCTCTGACCCTCTGGAAATATGTAATGCTTCCAATCTTGCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000544123.5
ENST00000637651.1
CDS-3UTR GCA 90 bp TCTTCTGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGTCATGGTCAATGTCTaGATCCCCCGTGATGACTAT +
Preference number: 4 (lower is better)
Translates to: SSGLKFSTDRYKSVGLEEVMVNV*IPRDDY
Trigger: ATAGTCATCACGGGGGATGCAGACATTGACCATGAC...CTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCAGAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp TGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACCATAACCTGGCAGTTTaGAGTCATTCTCCTTACACC +
Preference number: 4 (lower is better)
Translates to: WTEIFHGQIQVSWVRRGNHNLAV*SHSPYT
Trigger: GGTGTAAGGAGAATGACTGCAAACTGCCAGGTTATG...GTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341928.7
CDS-3UTR GCA 90 bp TCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATTCTTCTGGACTGAAATTTTCACAGGGTGGTCCCCTTaGCAGTTTGCTGTCTGTAGC +
Preference number: 4 (lower is better)
Translates to: SASVFINGQGQFFWTEIFTGWSP*QFAVCS
Trigger: GCTACAGACAGCAAACTGGCAAGGGGACCACCCTGT...GAAAATTTCAGTCCAGAAGAATTGACCTTGACCATTAATAAAGACACTGGCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341928.7
CDS-3UTR GCA 90 bp TTGCTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCTCTGTAGTGGAGGGCTaGTCCACTTTCTCACCCTCT +
Preference number: 4 (lower is better)
Translates to: LLYYGKISLPVSLLMVKVSVVEG*STFSPS
Trigger: AGAGGGTGAGAAAGTGGAGCAGCCCTCCACTACAGA...GACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400111.8
ENST00000637651.1
CDS-3UTR GCA 90 bp AGCAAGATTGGAAGCATTACATATTTCCAGAGGGTCAGAGAGTCATTACTGTTTTCTGTAGTGGAGGGCTaGTCCACTTTCTCACCCTCT +
Preference number: 4 (lower is better)
Translates to: SKIGSITYFQRVRESLLFSVVEG*STFSPS
Trigger: AGAGGGTGAGAAAGTGGAGCAGCCCTCCACTACAGA...AAACAGTAATGACTCTCTGACCCTCTGGAAATATGTAATGCTTCCAATCTTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400111.8
ENST00000637651.1
CDS-3UTR GCA 90 bp CAATTCTTCTGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGACAGGACCTCATATTCTaGCAGGCCGGGAATGATCTT +
Preference number: 4 (lower is better)
Translates to: QFFWTEIFHGQIQVSWVRQDLIF*QAGNDL
Trigger: AAGATCATTCCCGGCCTGGCAGAATATGAGGTCCTG...TCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCAGAAGAATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400111.8
ENST00000637651.1
CDS-3UTR GCA 90 bp CAATTCTTCTGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGATCACTCTCGGGCACTTaGTCTGTTTTGCTGAAGCGT +
Preference number: 4 (lower is better)
Translates to: QFFWTEIFHGQIQVSWVRSLSGT*SVLLKR
Trigger: ACGCTTCAGCAAAACAGAGCAAGTGCCCGAGAGTGA...TCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCAGAAGAATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400111.8
ENST00000637651.1
CDS-3UTR CCA 90 bp TATCAAACAGCACTTGTCCTCTGGAGCGTTTCTCTACATCACAGGTATATTCTGACAGCACTTGTCCTCTaGAGCGTTTCTCTACATCAC +
Preference number: 4 (lower is better)
Translates to: YQTALVLWSVSLHHRYILTALVL*SVSLHH
Trigger: GTGATGTAGAGAAACGCTCCAGAGGACAAGTGCTGT...CAGAATATACCTGTGATGTAGAGAAACGCTCCAGAGGACAAGTGCTGTTTGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580866.2
CDS-3UTR CCA 90 bp TTGCTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCGCTCCCACATTCATCTaGGTCATAGTCTCCGAGCTC +
Preference number: 4 (lower is better)
Translates to: LLYYGKISLPVSLLMVKVAPTFI*VIVSEL
Trigger: GAGCTCGGAGACTATGACCCAGATGAATGTGGGAGC...GACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp ATTGCTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTGGCGTCATTCCTCTGTaGCTCTTGTGCAGCTCGATC +
Preference number: 4 (lower is better)
Translates to: IALLWEDLSASVFINGQGGVIPL*LLCSSI
Trigger: GATCGAGCTGCACAAGAGCCACAGAGGAATGACGCC...ACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAGCAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp CTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATGGCGTCATTCCTCTGTaGCTCTTGTGCAGCTCGATC +
Preference number: 4 (lower is better)
Translates to: LYYGKISLPVSLLMVKVNGVIPL*LLCSSI
Trigger: GATCGAGCTGCACAAGAGCCACAGAGGAATGACGCC...ATTGACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp TCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATTCTTCTGGACTGAAATTTTCGGCGTCATTCCTCTGTaGCTCTTGTGCAGCTCGATC +
Preference number: 4 (lower is better)
Translates to: SASVFINGQGQFFWTEIFGVIPL*LLCSSI
Trigger: GATCGAGCTGCACAAGAGCCACAGAGGAATGACGCC...GAAAATTTCAGTCCAGAAGAATTGACCTTGACCATTAATAAAGACACTGGCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp AAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATGGCAGCTCGATGGTTTaGCAGCTTAAACCCAATGGT +
Preference number: 4 (lower is better)
Translates to: KFSTDRYKSVGLEEGTPYGSSMV*QLKPNG
Trigger: ACCATTGGGTTTAAGCTGCCAAACCATCGAGCTGCC...ATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp AGCAAGATTGGAAGCATTACATATTTCCAGAGGGTCAGAGAGTCATTACTGTTTCGCTTGGCAGCTCGATaGTTTGGCAGCTTAAACCCA +
Preference number: 4 (lower is better)
Translates to: SKIGSITYFQRVRESLLFRLAAR*FGSLNP
Trigger: TGGGTTTAAGCTGCCAAACCATCGAGCTGCCAAGCG...AAACAGTAATGACTCTCTGACCCTCTGGAAATATGTAATGCTTCCAATCTTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000544123.5
ENST00000637651.1
CDS-3UTR CCA 90 bp AAAGCAAGATTGGAAGCATTACATATTTCCAGAGGGTCAGAGAGTCATTACTGTCGCTTGGCAGCTCGATaGTTTGGCAGCTTAAACCCA +
Preference number: 4 (lower is better)
Translates to: KARLEALHISRGSESHYCRLAAR*FGSLNP
Trigger: TGGGTTTAAGCTGCCAAACCATCGAGCTGCCAAGCG...ACAGTAATGACTCTCTGACCCTCTGGAAATATGTAATGCTTCCAATCTTGCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000544123.5
ENST00000637651.1
CDS-3UTR CCA 90 bp TCTTCTGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGATCTATCAACGCACTaGCTCTTCTCGTTTGCGCTT +
Preference number: 4 (lower is better)
Translates to: SSGLKFSTDRYKSVGLEEDLSTH*LFSFAL
Trigger: AAGCGCAAACGAGAAGAGCCAGTGCGTTGATAGATC...CTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCAGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp TGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTTCAAAGTAAGGTGCTaGGCGATCTATCAACGCACT +
Preference number: 4 (lower is better)
Translates to: WTEIFHGQIQVSWVRRGNFKVRC*AIYQRT
Trigger: AGTGCGTTGATAGATCGCCCAGCACCTTACTTTGAA...GTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp AGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCTGGTTTTCCTTCAAAGTAAGGTGCTaGGCGATCTATCAACGCACT +
Preference number: 4 (lower is better)
Translates to: RYKSVGLEEGTPYRLWFSFKVRC*AIYQRT
Trigger: AGTGCGTTGATAGATCGCCCAGCACCTTACTTTGAA...GGAAAACCAGAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp ACCCTCTTTAGCTTTCCCAGTCATAGTAACAATTCTCCCGGAGACAGTGTCATATTCAAAGTAAGGTGCTaGGCGATCTATCAACGCACT +
Preference number: 4 (lower is better)
Translates to: TLFSFPSHSNNSPGDSVIFKVRC*AIYQRT
Trigger: AGTGCGTTGATAGATCGCCCAGCACCTTACTTTGAA...TATGACACTGTCTCCGGGAGAATTGTTACTATGACTGGGAAAGCTAAAGAGGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637651.1
CDS-3UTR CCA 90 bp TCTTCTGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGAGATGCCTTTTGTTGTaGCGTACTGGCCAGTACCAA +
Preference number: 4 (lower is better)
Translates to: SSGLKFSTDRYKSVGLEERCLLL*RTGQYQ
Trigger: TTGGTACTGGCCAGTACGCCACAACAAAAGGCATCT...CTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCAGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp TCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATTCTTCTGGACTGAAATTTTCTCTGCATCTTCCTCCTaGTCCGACTCAGTGGCAGTG +
Preference number: 4 (lower is better)
Translates to: SASVFINGQGQFFWTEIFSASSS*SDSVAV
Trigger: CACTGCCACTGAGTCGGACCAGGAGGAAGATGCAGA...GAAAATTTCAGTCCAGAAGAATTGACCTTGACCATTAATAAAGACACTGGCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000544123.5
ENST00000637651.1
CDS-3UTR CCA 90 bp CAATTCTTCTGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGACCGTCTCTATTCCACTaGACTCCGTCTTGGTTTCCA +
Preference number: 4 (lower is better)
Translates to: QFFWTEIFHGQIQVSWVRPSLFH*TPSWFP
Trigger: TGGAAACCAAGACGGAGTCCAGTGGAATAGAGACGG...TCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCAGAAGAATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp TGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTTTCTGAAATGTGGATaGCTGCACTCTGCTCCTCTT +
Preference number: 4 (lower is better)
Translates to: WTEIFHGQIQVSWVRRGNFLKCG*LHSAPL
Trigger: AAGAGGAGCAGAGTGCAGCCATCCACATTTCAGAAA...GTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp GACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCTGGTTTTTTCTGAAATGTGGATaGCTGCACTCTGCTCCTCTT +
Preference number: 4 (lower is better)
Translates to: DRYKSVGLEEGTPYRLWFFLKCG*LHSAPL
Trigger: AAGAGGAGCAGAGTGCAGCCATCCACATTTCAGAAA...AAACCAGAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTC
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp AGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCTGGTTTTCCAAAGTTTCTGAAATGTaGATGGCTGCACTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: RYKSVGLEEGTPYRLWFSKVSEM*MAALCS
Trigger: GGAGCAGAGTGCAGCCATCCACATTTCAGAAACTTT...GGAAAACCAGAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp GACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCTGGTTTAAAGTTTCTGAAATGTaGATGGCTGCACTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: DRYKSVGLEEGTPYRLWFKVSEM*MAALCS
Trigger: GGAGCAGAGTGCAGCCATCCACATTTCAGAAACTTT...AAACCAGAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp GAACTCCATATAGGCTCTGGTTTTCCTAACGGTTTGCATGACTGCATTCATGTGTTCGGTGTGAACTACTaGCACTTCCTTCGTGGAAAT +
Preference number: 4 (lower is better)
Translates to: ELHIGSGFPNGLHDCIHVFGVNY*HFLRGN
Trigger: ATTTCCACGAAGGAAGTGCCAGTAGTTCACACCGAA...CACATGAATGCAGTCATGCAAACCGTTAGGAAAACCAGAGCCTATATGGAGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp GACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCTGGTTTCAGATACAAGTCAGTTaGGTTAGAAGAGGGAACTCC +
Preference number: 4 (lower is better)
Translates to: DRYKSVGLEEGTPYRLWFQIQVS*VRRGNS
Trigger: GGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTG...AAACCAGAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp ATTGCTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTTCCTACGGAGCTCTGTaGGAGATGTGGGGGCACAAT +
Preference number: 4 (lower is better)
Translates to: IALLWEDLSASVFINGQGSYGAL*EMWGHN
Trigger: ATTGTGCCCCCACATCTCCCACAGAGCTCCGTAGGA...ACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAGCAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341928.7
CDS-3UTR CCA 90 bp TCCTCTCCATCTTCTGGTGTGATCTCTGTCTCTTTATGGACCACTACTTTGGTCTCTCTGTTTCTTCTTTaGTCTCTTCAGGGACAAGTG +
Preference number: 4 (lower is better)
Translates to: SSPSSGVISVSLWTTTLVSLFLL*SLQGQV
Trigger: CACTTGTCCCTGAAGAGACCAAAGAAGAAACAGAGA...GACCAAAGTAGTGGTCCATAAAGAGACAGAGATCACACCAGAAGATGGAGAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637651.1
CDS-3UTR CCA 90 bp AAAGCAAGATTGGAAGCATTACATATTTCCAGAGGGTCAGAGAGTCATTACTGTCCTCTGGTCCTCTCTTaGATTTCTCATCAGCGAGGG +
Preference number: 4 (lower is better)
Translates to: KARLEALHISRGSESHYCPLVLS*ISHQRG
Trigger: CCCTCGCTGATGAGAAATCCAAGAGAGGACCAGAGG...ACAGTAATGACTCTCTGACCCTCTGGAAATATGTAATGCTTCCAATCTTGCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400111.8
ENST00000637651.1
CDS-3UTR CCA 90 bp TCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCAAGCTAAGTTATTCCTaGTCATGGTCAATGTCTGCA +
Preference number: 4 (lower is better)
Translates to: STDRYKSVGLEEGTPYRLKLSYS*SWSMSA
Trigger: TGCAGACATTGACCATGACCAGGAATAACTTAGCTT...GAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544123.5
CDS-3UTR CCA 90 bp GGAAAGTTAATTCGGAATTTTCTTCGGAATACATGCTGGACTAGAGGAATAGCACACACTACCTGGTCATaGTCAATGTCTGCATCCCCC +
Preference number: 4 (lower is better)
Translates to: GKLIRNFLRNTCWTRGIAHTTWS*SMSASP
Trigger: GGGGGATGCAGACATTGACCATGACCAGGTAGTGTG...TGCTATTCCTCTAGTCCAGCATGTATTCCGAAGAAAATTCCGAATTAACTTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579951.2
CDS-3UTR TCA 90 bp AGCAAGATTGGAAGCATTACATATTTCCAGAGGGTCAGAGAGTCATTACTGTTTTTCGGTCGTCATGGTTaGTTGTTCTGGGATCAGCAG +
Preference number: 4 (lower is better)
Translates to: SKIGSITYFQRVRESLLFFGRHG*LFWDQQ
Trigger: CTGCTGATCCCAGAACAATCAACCATGACGACCGAA...AAACAGTAATGACTCTCTGACCCTCTGGAAATATGTAATGCTTCCAATCTTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
CDS-3UTR TCA 90 bp TCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCCTGGTAACAGTAGTCTaGAAAATGTATGATGCTCAA +
Preference number: 4 (lower is better)
Translates to: STDRYKSVGLEEGTPYRLLVTVV*KMYDAQ
Trigger: TTGAGCATCATACATTTTTCAGACTACTGTTACCAG...GAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR TCA 90 bp TCATTGCAAGCCACAGCAGCACTATCACATCTTGGGAACAGGGAGCTGGAAATACTGGTAACAGTAGTCTaGAAAATGTATGATGCTCAA +
Preference number: 4 (lower is better)
Translates to: SLQATAALSHLGNRELEILVTVV*KMYDAQ
Trigger: TTGAGCATCATACATTTTTCAGACTACTGTTACCAG...TATTTCCAGCTCCCTGTTCCCAAGATGTGATAGTGCTGCTGTGGCTTGCAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637651.1
CDS-3UTR TCA 90 bp CTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATCCGGAGTCACAGTGGTaGTCAAGTTGGTCTGAGAGA +
Preference number: 4 (lower is better)
Translates to: LYYGKISLPVSLLMVKVNPESQW*SSWSER
Trigger: TCTCTCAGACCAACTTGATCACCACTGTGACTCCGG...ATTGACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR TCA 90 bp CGTTGCTTCATGCATTATCGGTTTAGTGATGCTGAATCAGATTGCTTTATTATGCCGGAGTCACAGTGGTaGTCAAGTTGGTCTGAGAGA +
Preference number: 4 (lower is better)
Translates to: RCFMHYRFSDAESDCFIMPESQW*SSWSER
Trigger: TCTCTCAGACCAACTTGATCACCACTGTGACTCCGG...CATAATAAAGCAATCTGATTCAGCATCACTAAACCGATAATGCATGAAGCAACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR TCA 90 bp TGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTTGTTCCAAAGTTTCTaGAATGTGGATGGCTGCACT +
Preference number: 4 (lower is better)
Translates to: WTEIFHGQIQVSWVRRGNLFQSF*NVDGCT
Trigger: AGTGCAGCCATCCACATTTCAGAAACTTTGGAACAA...GTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR TCA 90 bp GAACTCCATATAGGCTCTGGTTTTCCTAACGGTTTGCATGACTGCATTCATGTGTTGTTCCAAAGTTTCTaGAATGTGGATGGCTGCACT +
Preference number: 4 (lower is better)
Translates to: ELHIGSGFPNGLHDCIHVLFQSF*NVDGCT
Trigger: AGTGCAGCCATCCACATTTCAGAAACTTTGGAACAA...CACATGAATGCAGTCATGCAAACCGTTAGGAAAACCAGAGCCTATATGGAGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR TCA 90 bp ACCCTCTTTAGCTTTCCCAGTCATAGTAACAATTCTCCCGGAGACAGTGTCATATTGTTCCAAAGTTTCTaGAATGTGGATGGCTGCACT +
Preference number: 4 (lower is better)
Translates to: TLFSFPSHSNNSPGDSVILFQSF*NVDGCT
Trigger: AGTGCAGCCATCCACATTTCAGAAACTTTGGAACAA...TATGACACTGTCTCCGGGAGAATTGTTACTATGACTGGGAAAGCTAAAGAGGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637651.1
CDS-3UTR TCA 90 bp TCATTGCAAGCCACAGCAGCACTATCACATCTTGGGAACAGGGAGCTGGAAATAGTTGAGGACTCAAAATaGGGTTTTTGTTCCAAAGTT +
Preference number: 4 (lower is better)
Translates to: SLQATAALSHLGNRELEIVEDSK*GFCSKV
Trigger: AACTTTGGAACAAAAACCTCATTTTGAGTCCTCAAC...TATTTCCAGCTCCCTGTTCCCAAGATGTGATAGTGCTGCTGTGGCTTGCAATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637651.1
CDS-3UTR TCA 90 bp GGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATTCTTCTGGATTCCGTCTTCACCGTTaGGGACTCAAAATGAGGTTT +
Preference number: 4 (lower is better)
Translates to: GKISLPVSLLMVKVNSSGFRLHR*GLKMRF
Trigger: AAACCTCATTTTGAGTCCTCAACGGTGAAGACGGAA...TCCAGAAGAATTGACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR TCA 90 bp GTGTTACATGAGACCACGGTTTATATTGTTGGTTATGAACGTGCAGGTATAGCTAAACACTGCCAAAACTaGTGGTTTCCGTCTTCACCG +
Preference number: 4 (lower is better)
Translates to: VLHETTVYIVGYERAGIAKHCQN*WFPSSP
Trigger: CGGTGAAGACGGAAACCATCAGTTTTGGCAGTGTTT...AGCTATACCTGCACGTTCATAACCAACAATATAAACCGTGGTCTCATGTAACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR TCA 90 bp AAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAAACACTGCCAAAACTaGTGGTTTCCGTCTTCACCG +
Preference number: 4 (lower is better)
Translates to: KFSTDRYKSVGLEEGTPYKHCQN*WFPSSP
Trigger: CGGTGAAGACGGAAACCATCAGTTTTGGCAGTGTTT...ATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR TCA 90 bp AAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATCTTTACTCCTCCCGGTaGAACACTGCCAAAACTGAT +
Preference number: 4 (lower is better)
Translates to: KFSTDRYKSVGLEEGTPYLYSSR*NTAKTD
Trigger: ATCAGTTTTGGCAGTGTTTCACCGGGAGGAGTAAAG...ATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR TCA 90 bp CAATTCTTCTGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGACTTTACTCCTCCCGGTaGAACACTGCCAAAACTGAT +
Preference number: 4 (lower is better)
Translates to: QFFWTEIFHGQIQVSWVRLYSSR*NTAKTD
Trigger: ATCAGTTTTGGCAGTGTTTCACCGGGAGGAGTAAAG...TCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCAGAAGAATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR TCA 90 bp GTGTTACATGAGACCACGGTTTATATTGTTGGTTATGAACGTGCAGGTATAGCTGTTTTGGTTTCGGTGTaGACTACTGGCACTTCCTTC +
Preference number: 4 (lower is better)
Translates to: VLHETTVYIVGYERAGIAVLVSV*TTGTSF
Trigger: GAAGGAAGTGCCAGTAGTTCACACCGAAACCAAAAC...AGCTATACCTGCACGTTCATAACCAACAATATAAACCGTGGTCTCATGTAACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR TCA 90 bp CAATTCTTCTGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGATGGTGGTTTCAGATGTaGTCGTCTGTGCACTCATCA +
Preference number: 4 (lower is better)
Translates to: QFFWTEIFHGQIQVSWVRWWFQM*SSVHSS
Trigger: TGATGAGTGCACAGACGATCACATCTGAAACCACCA...TCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCAGAAGAATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR TCA 90 bp AAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATTGGTGGTTTCAGATGTaGTCGTCTGTGCACTCATCA +
Preference number: 4 (lower is better)
Translates to: KFSTDRYKSVGLEEGTPYWWFQM*SSVHSS
Trigger: TGATGAGTGCACAGACGATCACATCTGAAACCACCA...ATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR TCA 90 bp TCTTCTGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGCTCCATCTTCTGGTGTaGTCTCTGTCTCTTTATGGA +
Preference number: 4 (lower is better)
Translates to: SSGLKFSTDRYKSVGLEELHLLV*SLSLYG
Trigger: TCCATAAAGAGACAGAGATCACACCAGAAGATGGAG...CTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCAGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000545076.5
ENST00000637651.1
CDS-3UTR TCA 90 bp GACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCTGGTTTACGTGCAGGTATAGCTaGAAACTGAGACATTTTGTG +
Preference number: 4 (lower is better)
Translates to: DRYKSVGLEEGTPYRLWFTCRYS*KLRHFV
Trigger: CACAAAATGTCTCAGTTTTCAGCTATACCTGCACGT...AAACCAGAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR TCA 90 bp GAACTCCATATAGGCTCTGGTTTTCCTAACGGTTTGCATGACTGCATTCATGTGACGTGCAGGTATAGCTaGAAACTGAGACATTTTGTG +
Preference number: 4 (lower is better)
Translates to: ELHIGSGFPNGLHDCIHVTCRYS*KLRHFV
Trigger: CACAAAATGTCTCAGTTTTCAGCTATACCTGCACGT...CACATGAATGCAGTCATGCAAACCGTTAGGAAAACCAGAGCCTATATGGAGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR TCA 90 bp AGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCTGGTTTTCCTTAAGCTCTCTGGATTaGACACAGACCAAAGCAAAC +
Preference number: 4 (lower is better)
Translates to: RYKSVGLEEGTPYRLWFSLSSLD*TQTKAN
Trigger: GTTTGCTTTGGTCTGTGTTCAATCCAGAGAGCTTAA...GGAAAACCAGAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000544123.5
ENST00000637651.1
CDS-3UTR TCA 90 bp TGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTTAAGCTCTCTGGATTaGACACAGACCAAAGCAAAC +
Preference number: 4 (lower is better)
Translates to: WTEIFHGQIQVSWVRRGNLSSLD*TQTKAN
Trigger: GTTTGCTTTGGTCTGTGTTCAATCCAGAGAGCTTAA...GTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000544123.5
ENST00000637651.1
CDS-3UTR TCA 90 bp ATTGCTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTTCCAGTCCTTGCTTCTaGGCACAGAATTCCCCACAG +
Preference number: 4 (lower is better)
Translates to: IALLWEDLSASVFINGQGSSPCF*AQNSPQ
Trigger: CTGTGGGGAATTCTGTGCTCAGAAGCAAGGACTGGA...ACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAGCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544123.5
CDS-3UTR TCA 90 bp GTGTTACATGAGACCACGGTTTATATTGTTGGTTATGAACGTGCAGGTATAGCTTTCGGTCGTCATGGTTaGTTGTTCTCGCAATGCAGT +
Preference number: 4 (lower is better)
Translates to: VLHETTVYIVGYERAGIAFGRHG*LFSQCS
Trigger: ACTGCATTGCGAGAACAATCAACCATGACGACCGAA...AGCTATACCTGCACGTTCATAACCAACAATATAAACCGTGGTCTCATGTAACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544123.5
CDS-3UTR TCA 90 bp TCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCAATCTTATTTACAACTaGAGTTCACTGTCTCAGGAG +
Preference number: 4 (lower is better)
Translates to: STDRYKSVGLEEGTPYRLNLIYN*SSLSQE
Trigger: CTCCTGAGACAGTGAACTTCAGTTGTAAATAAGATT...GAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637651.1
CDS-3UTR GCA 90 bp CAATTCTTCTGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAATATTCGAGCTGTTTTaGAGCCCTGGCAGCAAACTC +
Preference number: 4 (lower is better)
Translates to: QFFWTEIFHGQIQVSWVRIFELF*SPGSKL
Trigger: GAGTTTGCTGCCAGGGCTGCAAAACAGCTCGAATAT...TCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCAGAAGAATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp TCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCAGTATCACTTTGCACTaGATGCTTTTAGGCTTTTTG +
Preference number: 4 (lower is better)
Translates to: STDRYKSVGLEEGTPYRLSITLH*MLLGFL
Trigger: CAAAAAGCCTAAAAGCATGCAGTGCAAAGTGATACT...GAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp TCCTCTCCATCTTCTGGTGTGATCTCTGTCTCTTTATGGACCACTACTTTGGTCTTTAGTGTGGTTTGGTaGAAAGCGGAACTCACTAAT +
Preference number: 4 (lower is better)
Translates to: SSPSSGVISVSLWTTTLVFSVVW*KAELTN
Trigger: ATTAGTGAGTTCCGCTTTGCACCAAACCACACTAAA...GACCAAAGTAGTGGTCCATAAAGAGACAGAGATCACACCAGAAGATGGAGAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637651.1
CDS-3UTR GCA 90 bp AAAGCAAGATTGGAAGCATTACATATTTCCAGAGGGTCAGAGAGTCATTACTGTCCTCTGTGGCTCTTGTaGAGCTCGATCACTTTGTCT +
Preference number: 4 (lower is better)
Translates to: KARLEALHISRGSESHYCPLWLL*SSITLS
Trigger: AGACAAAGTGATCGAGCTGCACAAGAGCCACAGAGG...ACAGTAATGACTCTCTGACCCTCTGGAAATATGTAATGCTTCCAATCTTGCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000544123.5
ENST00000637651.1
CDS-3UTR GCA 90 bp AGCAAGATTGGAAGCATTACATATTTCCAGAGGGTCAGAGAGTCATTACTGTTTCCTCTGTGGCTCTTGTaGAGCTCGATCACTTTGTCT +
Preference number: 4 (lower is better)
Translates to: SKIGSITYFQRVRESLLFPLWLL*SSITLS
Trigger: AGACAAAGTGATCGAGCTGCACAAGAGCCACAGAGG...AAACAGTAATGACTCTCTGACCCTCTGGAAATATGTAATGCTTCCAATCTTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000544123.5
ENST00000637651.1
CDS-3UTR GCA 90 bp TTGCTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCATGCATCTCTGCTTCTaGTGGCGTCATTCCTCTGTG +
Preference number: 4 (lower is better)
Translates to: LLYYGKISLPVSLLMVKVMHLCF*WRHSSV
Trigger: CACAGAGGAATGACGCCAGCAGAAGCAGAGATGCAT...GACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp GTGTTACATGAGACCACGGTTTATATTGTTGGTTATGAACGTGCAGGTATAGCTCAAGAAATGCATCTCTaGTTCTGCTGGCGTCATTCC +
Preference number: 4 (lower is better)
Translates to: VLHETTVYIVGYERAGIAQEMHL*FCWRHS
Trigger: GGAATGACGCCAGCAGAAGCAGAGATGCATTTCTTG...AGCTATACCTGCACGTTCATAACCAACAATATAAACCGTGGTCTCATGTAACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp CAAAGCAAGATTGGAAGCATTACATATTTCCAGAGGGTCAGAGAGTCATTACTGCAAGAAATGCATCTCTaGTTCTGCTGGCGTCATTCC +
Preference number: 4 (lower is better)
Translates to: QSKIGSITYFQRVRESLLQEMHL*FCWRHS
Trigger: GGAATGACGCCAGCAGAAGCAGAGATGCATTTCTTG...CAGTAATGACTCTCTGACCCTCTGGAAATATGTAATGCTTCCAATCTTGCTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000544123.5
ENST00000637651.1
CDS-3UTR GCA 90 bp ATTGCTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCTGGCTCTTCTCGTTTaGGCTTGTGTCCTGCCACTA +
Preference number: 4 (lower is better)
Translates to: IALLWEDLSASVFINGQGLALLV*ACVLPL
Trigger: TAGTGGCAGGACACAAGCGCAAACGAGAAGAGCCAG...ACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAGCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp TTGCTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCGCGTTCAAAGTAAGGTaGTGGGCGATCTATCAACGC +
Preference number: 4 (lower is better)
Translates to: LLYYGKISLPVSLLMVKVAFKVR*WAIYQR
Trigger: GCGTTGATAGATCGCCCAGCACCTTACTTTGAACGC...GACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp CAAAGCAAGATTGGAAGCATTACATATTTCCAGAGGGTCAGAGAGTCATTACTGGCCAGTACCAACCTCTaGAGCAGACATAGAATCCTT +
Preference number: 4 (lower is better)
Translates to: QSKIGSITYFQRVRESLLASTNL*SRHRIL
Trigger: AAGGATTCTATGTCTGCTGCAGAGGTTGGTACTGGC...CAGTAATGACTCTCTGACCCTCTGGAAATATGTAATGCTTCCAATCTTGCTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000342933.7
ENST00000400111.8
ENST00000544123.5
ENST00000637651.1
CDS-3UTR GCA 90 bp AAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATGCCAGTACCAACCTCTaGAGCAGACATAGAATCCTT +
Preference number: 4 (lower is better)
Translates to: KFSTDRYKSVGLEEGTPYASTNL*SRHRIL
Trigger: AAGGATTCTATGTCTGCTGCAGAGGTTGGTACTGGC...ATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp GGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATTCTTCTGGATTTTCCCCAGAAGACTaGTTAGTCTCTTCAGGGACA +
Preference number: 4 (lower is better)
Translates to: GKISLPVSLLMVKVNSSGFSPED*LVSSGT
Trigger: TGTCCCTGAAGAGACTAAGCAGTCTTCTGGGGAAAA...TCCAGAAGAATTGACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000544123.5
CDS-3UTR GCA 90 bp AGCAAGATTGGAAGCATTACATATTTCCAGAGGGTCAGAGAGTCATTACTGTTTTTTAATGCCTGTGAATaGGGGCTGTGCTGCAGCATC +
Preference number: 4 (lower is better)
Translates to: SKIGSITYFQRVRESLLFFNACE*GLCCSI
Trigger: GATGCTGCAGCACAGCCCGCATTCACAGGCATTAAA...AAACAGTAATGACTCTCTGACCCTCTGGAAATATGTAATGCTTCCAATCTTGCT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000544123.5
ENST00000637651.1
CDS-3UTR GCA 90 bp GTTGCTTCATGCATTATCGGTTTAGTGATGCTGAATCAGATTGCTTTATTATGGAGATGTGATCGTCTGTaGACTCATCAGCACGCCTGG +
Preference number: 4 (lower is better)
Translates to: VASCIIGLVMLNQIALLWRCDRL*THQHAW
Trigger: CCAGGCGTGCTGATGAGTGCACAGACGATCACATCT...CCATAATAAAGCAATCTGATTCAGCATCACTAAACCGATAATGCATGAAGCAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp CGTTGCTTCATGCATTATCGGTTTAGTGATGCTGAATCAGATTGCTTTATTATGAGATGTGATCGTCTGTaGACTCATCAGCACGCCTGG +
Preference number: 4 (lower is better)
Translates to: RCFMHYRFSDAESDCFIMRCDRL*THQHAW
Trigger: CCAGGCGTGCTGATGAGTGCACAGACGATCACATCT...CATAATAAAGCAATCTGATTCAGCATCACTAAACCGATAATGCATGAAGCAACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp AGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCTGGTTTTCCTTCTTGTCTCTGAAATaGCCCCTTTCACAGTTTTGG +
Preference number: 4 (lower is better)
Translates to: RYKSVGLEEGTPYRLWFSFLSLK*PLSQFW
Trigger: CCAAAACTGTGAAAGGGGGCATTTCAGAGACAAGAA...GGAAAACCAGAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp TGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTTCTTGTCTCTGAAATaGCCCCTTTCACAGTTTTGG +
Preference number: 4 (lower is better)
Translates to: WTEIFHGQIQVSWVRRGNFLSLK*PLSQFW
Trigger: CCAAAACTGTGAAAGGGGGCATTTCAGAGACAAGAA...GTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp GTGTTACATGAGACCACGGTTTATATTGTTGGTTATGAACGTGCAGGTATAGCTGTCATGGTCAATGTCTaGATCCCCCGTGATGACTAT +
Preference number: 4 (lower is better)
Translates to: VLHETTVYIVGYERAGIAVMVNV*IPRDDY
Trigger: ATAGTCATCACGGGGGATGCAGACATTGACCATGAC...AGCTATACCTGCACGTTCATAACCAACAATATAAACCGTGGTCTCATGTAACAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp CAATTCTTCTGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAGTCATGGTCAATGTCTaGATCCCCCGTGATGACTAT +
Preference number: 4 (lower is better)
Translates to: QFFWTEIFHGQIQVSWVRVMVNV*IPRDDY
Trigger: ATAGTCATCACGGGGGATGCAGACATTGACCATGAC...TCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCAGAAGAATTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp TGCATGATCAGTGGTGAGGTGGAGACTTATGAGCTAGATCTATATCCACAATTTGTCATGGTCAATGTCTaGATCCCCCGTGATGACTAT +
Preference number: 4 (lower is better)
Translates to: CMISGEVETYELDLYPQFVMVNV*IPRDDY
Trigger: ATAGTCATCACGGGGGATGCAGACATTGACCATGAC...AAATTGTGGATATAGATCTAGCTCATAAGTCTCCACCTCACCACTGATCATGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579951.2
CDS-3UTR GCA 90 bp AGCAAGATTGGAAGCATTACATATTTCCAGAGGGTCAGAGAGTCATTACTGTTTCAGGACCTCATATTCTaGCAGGCCGGGAATGATCTT +
Preference number: 4 (lower is better)
Translates to: SKIGSITYFQRVRESLLFQDLIF*QAGNDL
Trigger: AAGATCATTCCCGGCCTGGCAGAATATGAGGTCCTG...AAACAGTAATGACTCTCTGACCCTCTGGAAATATGTAATGCTTCCAATCTTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400111.8
ENST00000637651.1
CDS-3UTR GCA 90 bp AAAGCAAGATTGGAAGCATTACATATTTCCAGAGGGTCAGAGAGTCATTACTGTTCACTCTCGGGCACTTaGTCTGTTTTGCTGAAGCGT +
Preference number: 4 (lower is better)
Translates to: KARLEALHISRGSESHYCSLSGT*SVLLKR
Trigger: ACGCTTCAGCAAAACAGAGCAAGTGCCCGAGAGTGA...ACAGTAATGACTCTCTGACCCTCTGGAAATATGTAATGCTTCCAATCTTGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400111.8
ENST00000637651.1
CDS-3UTR GCA 90 bp CGTTGCTTCATGCATTATCGGTTTAGTGATGCTGAATCAGATTGCTTTATTATGCAGATGGTCTGGTTTTaGCTGCCCCACCCTTGTTTC +
Preference number: 4 (lower is better)
Translates to: RCFMHYRFSDAESDCFIMQMVWF*LPHPCF
Trigger: GAAACAAGGGTGGGGCAGGCAAAACCAGACCATCTG...CATAATAAAGCAATCTGATTCAGCATCACTAAACCGATAATGCATGAAGCAACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544123.5
CDS-3UTR CCA 90 bp CAAAGCAAGATTGGAAGCATTACATATTTCCAGAGGGTCAGAGAGTCATTACTGACAGCACTTGTCCTCTaGAGCGTTTCTCTACATCAC +
Preference number: 4 (lower is better)
Translates to: QSKIGSITYFQRVRESLLTALVL*SVSLHH
Trigger: GTGATGTAGAGAAACGCTCCAGAGGACAAGTGCTGT...CAGTAATGACTCTCTGACCCTCTGGAAATATGTAATGCTTCCAATCTTGCTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000544123.5
ENST00000637651.1
CDS-3UTR CCA 90 bp CAATTCTTCTGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAACAGCACTTGTCCTCTaGAGCGTTTCTCTACATCAC +
Preference number: 4 (lower is better)
Translates to: QFFWTEIFHGQIQVSWVRTALVL*SVSLHH
Trigger: GTGATGTAGAGAAACGCTCCAGAGGACAAGTGCTGT...TCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCAGAAGAATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp CTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATGCTCCCACATTCATCTaGGTCATAGTCTCCGAGCTC +
Preference number: 4 (lower is better)
Translates to: LYYGKISLPVSLLMVKVNAPTFI*VIVSEL
Trigger: GAGCTCGGAGACTATGACCCAGATGAATGTGGGAGC...ATTGACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp GTTGCTTCATGCATTATCGGTTTAGTGATGCTGAATCAGATTGCTTTATTATGGGCTCCCACATTCATCTaGGTCATAGTCTCCGAGCTC +
Preference number: 4 (lower is better)
Translates to: VASCIIGLVMLNQIALLWAPTFI*VIVSEL
Trigger: GAGCTCGGAGACTATGACCCAGATGAATGTGGGAGC...CCATAATAAAGCAATCTGATTCAGCATCACTAAACCGATAATGCATGAAGCAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp GAACTCCATATAGGCTCTGGTTTTCCTAACGGTTTGCATGACTGCATTCATGTGTTCTTTAGTGTGGTTTaGTGCAAAGCGGAACTCACT +
Preference number: 4 (lower is better)
Translates to: ELHIGSGFPNGLHDCIHVFFSVV*CKAELT
Trigger: AGTGAGTTCCGCTTTGCACCAAACCACACTAAAGAA...CACATGAATGCAGTCATGCAAACCGTTAGGAAAACCAGAGCCTATATGGAGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp ATTGCTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCATCTCTGCTTCTGCTaGCGTCATTCCTCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: IALLWEDLSASVFINGQGHLCFC*RHSSVA
Trigger: AGCCACAGAGGAATGACGCCAGCAGAAGCAGAGATG...ACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAGCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp TTCAGTGCATTTGCCATTTTTATTTCGCTATGCAGAAACATACATTCACCATGGCATCTCTGCTTCTGCTaGCGTCATTCCTCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: FSAFAIFISLCRNIHSPWHLCFC*RHSSVA
Trigger: AGCCACAGAGGAATGACGCCAGCAGAAGCAGAGATG...CCATGGTGAATGTATGTTTCTGCATAGCGAAATAAAAATGGCAAATGCACTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000544123.5
CDS-3UTR CCA 90 bp CGTTGCTTCATGCATTATCGGTTTAGTGATGCTGAATCAGATTGCTTTATTATGCATCTCTGCTTCTGCTaGCGTCATTCCTCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: RCFMHYRFSDAESDCFIMHLCFC*RHSSVA
Trigger: AGCCACAGAGGAATGACGCCAGCAGAAGCAGAGATG...CATAATAAAGCAATCTGATTCAGCATCACTAAACCGATAATGCATGAAGCAACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp TTGCTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCGGCAGCTCGATGGTTTaGCAGCTTAAACCCAATGGT +
Preference number: 4 (lower is better)
Translates to: LLYYGKISLPVSLLMVKVGSSMV*QLKPNG
Trigger: ACCATTGGGTTTAAGCTGCCAAACCATCGAGCTGCC...GACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp AGCAAGATTGGAAGCATTACATATTTCCAGAGGGTCAGAGAGTCATTACTGTTTGGCAGCTCGATGGTTTaGCAGCTTAAACCCAATGGT +
Preference number: 4 (lower is better)
Translates to: SKIGSITYFQRVRESLLFGSSMV*QLKPNG
Trigger: ACCATTGGGTTTAAGCTGCCAAACCATCGAGCTGCC...AAACAGTAATGACTCTCTGACCCTCTGGAAATATGTAATGCTTCCAATCTTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000544123.5
ENST00000637651.1
CDS-3UTR CCA 90 bp GTGTTACATGAGACCACGGTTTATATTGTTGGTTATGAACGTGCAGGTATAGCTCTTTCCATAAACGCTTaGCAGCTCGATGGTTTGGCA +
Preference number: 4 (lower is better)
Translates to: VLHETTVYIVGYERAGIALSINA*QLDGLA
Trigger: TGCCAAACCATCGAGCTGCCAAGCGTTTATGGAAAG...AGCTATACCTGCACGTTCATAACCAACAATATAAACCGTGGTCTCATGTAACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp GAACTCCATATAGGCTCTGGTTTTCCTAACGGTTTGCATGACTGCATTCATGTGAGGTTAGGAATTTCTTaGGAGGTGCTTCTGGTAACA +
Preference number: 4 (lower is better)
Translates to: ELHIGSGFPNGLHDCIHVRLGIS*EVLLVT
Trigger: TGTTACCAGAAGCACCTCCCAAGAAATTCCTAACCT...CACATGAATGCAGTCATGCAAACCGTTAGGAAAACCAGAGCCTATATGGAGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp CAATTCTTCTGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAGATCTATCAACGCACTaGCTCTTCTCGTTTGCGCTT +
Preference number: 4 (lower is better)
Translates to: QFFWTEIFHGQIQVSWVRDLSTH*LFSFAL
Trigger: AAGCGCAAACGAGAAGAGCCAGTGCGTTGATAGATC...TCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCAGAAGAATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp AAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATGATCTATCAACGCACTaGCTCTTCTCGTTTGCGCTT +
Preference number: 4 (lower is better)
Translates to: KFSTDRYKSVGLEEGTPYDLSTH*LFSFAL
Trigger: AAGCGCAAACGAGAAGAGCCAGTGCGTTGATAGATC...ATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp TTCAGTGCATTTGCCATTTTTATTTCGCTATGCAGAAACATACATTCACCATGGCTCTTCAGGGACAAGTaGTTCGATCATGGGGGCATC +
Preference number: 4 (lower is better)
Translates to: FSAFAIFISLCRNIHSPWLFRDK*FDHGGI
Trigger: GATGCCCCCATGATCGAACCACTTGTCCCTGAAGAG...CCATGGTGAATGTATGTTTCTGCATAGCGAAATAAAAATGGCAAATGCACTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000544123.5
CDS-3UTR CCA 90 bp TCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATTCTTCTGGACTGAAATTTTCCTCTTCAGGGACAAGTaGTTCGATCATGGGGGCATC +
Preference number: 4 (lower is better)
Translates to: SASVFINGQGQFFWTEIFLFRDK*FDHGGI
Trigger: GATGCCCCCATGATCGAACCACTTGTCCCTGAAGAG...GAAAATTTCAGTCCAGAAGAATTGACCTTGACCATTAATAAAGACACTGGCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp CTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATCTCTTCAGGGACAAGTaGTTCGATCATGGGGGCATC +
Preference number: 4 (lower is better)
Translates to: LYYGKISLPVSLLMVKVNLFRDK*FDHGGI
Trigger: GATGCCCCCATGATCGAACCACTTGTCCCTGAAGAG...ATTGACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp AGCAAGATTGGAAGCATTACATATTTCCAGAGGGTCAGAGAGTCATTACTGTTTCCGTCTCTATTCCACTaGACTCCGTCTTGGTTTCCA +
Preference number: 4 (lower is better)
Translates to: SKIGSITYFQRVRESLLFPSLFH*TPSWFP
Trigger: TGGAAACCAAGACGGAGTCCAGTGGAATAGAGACGG...AAACAGTAATGACTCTCTGACCCTCTGGAAATATGTAATGCTTCCAATCTTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000544123.5
ENST00000637651.1
CDS-3UTR CCA 90 bp GACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCTGGTTTCTGGCACTTCCTTCGTaGAAATTTCTAGCTTTACTC +
Preference number: 4 (lower is better)
Translates to: DRYKSVGLEEGTPYRLWFLALPS*KFLALL
Trigger: GAGTAAAGCTAGAAATTTCCACGAAGGAAGTGCCAG...AAACCAGAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp AGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCTGGTTTTCCCTGGCACTTCCTTCGTaGAAATTTCTAGCTTTACTC +
Preference number: 4 (lower is better)
Translates to: RYKSVGLEEGTPYRLWFSLALPS*KFLALL
Trigger: GAGTAAAGCTAGAAATTTCCACGAAGGAAGTGCCAG...GGAAAACCAGAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp GGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATTCTTCTGGACAGATACAAGTCAGTTaGGTTAGAAGAGGGAACTCC +
Preference number: 4 (lower is better)
Translates to: GKISLPVSLLMVKVNSSGQIQVS*VRRGNS
Trigger: GGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTG...TCCAGAAGAATTGACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp GGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATTCTTCTGGAAACATACATTCACCATaGGCTGTGATGCAGGTGATC +
Preference number: 4 (lower is better)
Translates to: GKISLPVSLLMVKVNSSGNIHSP*AVMQVI
Trigger: GATCACCTGCATCACAGCCCATGGTGAATGTATGTT...TCCAGAAGAATTGACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000544123.5
CDS-3UTR CCA 90 bp AGCAAGATTGGAAGCATTACATATTTCCAGAGGGTCAGAGAGTCATTACTGTTTTGTCGTCTGGACCTCTaGTCCTCTCTTGGATTTCTC +
Preference number: 4 (lower is better)
Translates to: SKIGSITYFQRVRESLLFCRLDL*SSLGFL
Trigger: GAGAAATCCAAGAGAGGACCAGAGGTCCAGACGACA...AAACAGTAATGACTCTCTGACCCTCTGGAAATATGTAATGCTTCCAATCTTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400111.8
ENST00000637651.1
CDS-3UTR CCA 90 bp GTGTTACATGAGACCACGGTTTATATTGTTGGTTATGAACGTGCAGGTATAGCTAGCAACGGTAAAGGCTaGTTCCTGGGAATATCTCCA +
Preference number: 4 (lower is better)
Translates to: VLHETTVYIVGYERAGIASNGKG*FLGISP
Trigger: TGGAGATATTCCCAGGAACCAGCCTTTACCGTTGCT...AGCTATACCTGCACGTTCATAACCAACAATATAAACCGTGGTCTCATGTAACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400111.8
ENST00000637651.1
CDS-3UTR CCA 90 bp TGCATGATCAGTGGTGAGGTGGAGACTTATGAGCTAGATCTATATCCACAATTTCTCACACACACTACCTaGTCATGGTCAATGTCTGCA +
Preference number: 4 (lower is better)
Translates to: CMISGEVETYELDLYPQFLTHTT*SWSMSA
Trigger: TGCAGACATTGACCATGACCAGGTAGTGTGTGTGAG...AAATTGTGGATATAGATCTAGCTCATAAGTCTCCACCTCACCACTGATCATGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579951.2
CDS-3UTR CCA 90 bp CTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATAGAAACGGAAAGGTTTaGGGTGGAAGGGGACTGCCT +
Preference number: 4 (lower is better)
Translates to: LYYGKISLPVSLLMVKVNRNGKV*GGRGLP
Trigger: AGGCAGTCCCCTTCCACCCCAAACCTTTCCGTTTCT...ATTGACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637651.1
CDS-3UTR CCA 90 bp ACCCTCTTTAGCTTTCCCAGTCATAGTAACAATTCTCCCGGAGACAGTGTCATATTATTAGGATCAGGGTaGCGCCGATTTAAGCAGATA +
Preference number: 4 (lower is better)
Translates to: TLFSFPSHSNNSPGDSVILLGSG*RRFKQI
Trigger: TATCTGCTTAAATCGGCGCCACCCTGATCCTAATAA...TATGACACTGTCTCCGGGAGAATTGTTACTATGACTGGGAAAGCTAAAGAGGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637651.1
CDS-3UTR TCA 90 bp CTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATTTCGGTCGTCATGGTTaGTTGTTCTGGGATCAGCAG +
Preference number: 4 (lower is better)
Translates to: LYYGKISLPVSLLMVKVNFGRHG*LFWDQQ
Trigger: CTGCTGATCCCAGAACAATCAACCATGACGACCGAA...ATTGACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
CDS-3UTR TCA 90 bp TGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCGTCTTCTAATTGCTaGTATTCGAGCTGTTTTGCA +
Preference number: 4 (lower is better)
Translates to: WTEIFHGQIQVSWVRRGNSSSNC*YSSCFA
Trigger: TGCAAAACAGCTCGAATATCAGCAATTAGAAGACGA...GTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR TCA 90 bp GACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCTGGTTTTCGTCTTCTAATTGCTaGTATTCGAGCTGTTTTGCA +
Preference number: 4 (lower is better)
Translates to: DRYKSVGLEEGTPYRLWFSSSNC*YSSCFA
Trigger: TGCAAAACAGCTCGAATATCAGCAATTAGAAGACGA...AAACCAGAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR TCA 90 bp TGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACATCACAGGTATATTCTaGTCCATCGAGAAGTATCAC +
Preference number: 4 (lower is better)
Translates to: WTEIFHGQIQVSWVRRGNITGIF*SIEKYH
Trigger: GTGATACTTCTCGATGGATCAGAATATACCTGTGAT...GTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR TCA 90 bp CAATTCTTCTGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAATAACGTTTGCTGGATaGGCGTTCAAAGTAAGGTGC +
Preference number: 4 (lower is better)
Translates to: QFFWTEIFHGQIQVSWVRITFAG*AFKVRC
Trigger: GCACCTTACTTTGAACGCTCATCCAGCAAACGTTAT...TCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCAGAAGAATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR TCA 90 bp CAAAGCAAGATTGGAAGCATTACATATTTCCAGAGGGTCAGAGAGTCATTACTGATAACGTTTGCTGGATaGGCGTTCAAAGTAAGGTGC +
Preference number: 4 (lower is better)
Translates to: QSKIGSITYFQRVRESLLITFAG*AFKVRC
Trigger: GCACCTTACTTTGAACGCTCATCCAGCAAACGTTAT...CAGTAATGACTCTCTGACCCTCTGGAAATATGTAATGCTTCCAATCTTGCTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000544123.5
ENST00000637651.1
CDS-3UTR TCA 90 bp TGCTCACGGTCACCACCTTGTAAGTCACAATCTTTTTCAAATCACCATCAACTAATAACGTTTGCTGGATaGGCGTTCAAAGTAAGGTGC +
Preference number: 4 (lower is better)
Translates to: CSRSPPCKSQSFSNHHQLITFAG*AFKVRC
Trigger: GCACCTTACTTTGAACGCTCATCCAGCAAACGTTAT...TAGTTGATGGTGATTTGAAAAAGATTGTGACTTACAAGGTGGTGACCGTGAGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637651.1
CDS-3UTR TCA 90 bp AAAGCAAGATTGGAAGCATTACATATTTCCAGAGGGTCAGAGAGTCATTACTGTTTTCAGAGCCATCCATaGGCTTTTCCCCAGAAGACT +
Preference number: 4 (lower is better)
Translates to: KARLEALHISRGSESHYCFQSHP*AFPQKT
Trigger: AGTCTTCTGGGGAAAAGCTCATGGATGGCTCTGAAA...ACAGTAATGACTCTCTGACCCTCTGGAAATATGTAATGCTTCCAATCTTGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000544123.5
ENST00000637651.1
CDS-3UTR TCA 90 bp GACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCTGGTTTCAGACTCTAATAAACTaGAGATTTCAGAGCCATCCA +
Preference number: 4 (lower is better)
Translates to: DRYKSVGLEEGTPYRLWFQTLIN*RFQSHP
Trigger: TGGATGGCTCTGAAATCTTCAGTTTATTAGAGTCTG...AAACCAGAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000544123.5
ENST00000637651.1
CDS-3UTR TCA 90 bp ACCCTCTTTAGCTTTCCCAGTCATAGTAACAATTCTCCCGGAGACAGTGTCATACAGACTCTAATAAACTaGAGATTTCAGAGCCATCCA +
Preference number: 4 (lower is better)
Translates to: TLFSFPSHSNNSPGDSVIQTLIN*RFQSHP
Trigger: TGGATGGCTCTGAAATCTTCAGTTTATTAGAGTCTG...TATGACACTGTCTCCGGGAGAATTGTTACTATGACTGGGAAAGCTAAAGAGGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637651.1
CDS-3UTR TCA 90 bp AAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATTTCCGTCTTCACCGTTaGGGACTCAAAATGAGGTTT +
Preference number: 4 (lower is better)
Translates to: KFSTDRYKSVGLEEGTPYFRLHR*GLKMRF
Trigger: AAACCTCATTTTGAGTCCTCAACGGTGAAGACGGAA...ATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR TCA 90 bp AAAGCAAGATTGGAAGCATTACATATTTCCAGAGGGTCAGAGAGTCATTACTGTCTTTACTCCTCCCGGTaGAACACTGCCAAAACTGAT +
Preference number: 4 (lower is better)
Translates to: KARLEALHISRGSESHYCLYSSR*NTAKTD
Trigger: ATCAGTTTTGGCAGTGTTTCACCGGGAGGAGTAAAG...ACAGTAATGACTCTCTGACCCTCTGGAAATATGTAATGCTTCCAATCTTGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000544123.5
ENST00000637651.1
CDS-3UTR TCA 90 bp TGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACGTGATGATTCATATGTaGTGGTTTTGGTTTCGGTGT +
Preference number: 4 (lower is better)
Translates to: WTEIFHGQIQVSWVRRGNVMIHM*WFWFRC
Trigger: ACACCGAAACCAAAACCATCACATATGAATCATCAC...GTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR TCA 90 bp TTGCTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCTGGTGGTTTCAGATGTaGTCGTCTGTGCACTCATCA +
Preference number: 4 (lower is better)
Translates to: LLYYGKISLPVSLLMVKVWWFQM*SSVHSS
Trigger: TGATGAGTGCACAGACGATCACATCTGAAACCACCA...GACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR TCA 90 bp AAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATCTCCATCTTCTGGTGTaGTCTCTGTCTCTTTATGGA +
Preference number: 4 (lower is better)
Translates to: KFSTDRYKSVGLEEGTPYLHLLV*SLSLYG
Trigger: TCCATAAAGAGACAGAGATCACACCAGAAGATGGAG...ATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000545076.5
ENST00000637651.1
CDS-3UTR TCA 90 bp CAAAGCAAGATTGGAAGCATTACATATTTCCAGAGGGTCAGAGAGTCATTACTGCTCCATCTTCTGGTGTaGTCTCTGTCTCTTTATGGA +
Preference number: 4 (lower is better)
Translates to: QSKIGSITYFQRVRESLLLHLLV*SLSLYG
Trigger: TCCATAAAGAGACAGAGATCACACCAGAAGATGGAG...CAGTAATGACTCTCTGACCCTCTGGAAATATGTAATGCTTCCAATCTTGCTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000637651.1
CDS-3UTR TCA 90 bp TGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCAATTCTTCTGGACTaGAATTTTCCACGGACAGAT +
Preference number: 4 (lower is better)
Translates to: WTEIFHGQIQVSWVRRGNSILLD*NFPRTD
Trigger: ATCTGTCCGTGGAAAATTTCAGTCCAGAAGAATTGA...GTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR TCA 90 bp TCTTCTGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGACGTGCAGGTATAGCTaGAAACTGAGACATTTTGTG +
Preference number: 4 (lower is better)
Translates to: SSGLKFSTDRYKSVGLEETCRYS*KLRHFV
Trigger: CACAAAATGTCTCAGTTTTCAGCTATACCTGCACGT...CTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCAGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR TCA 90 bp ATTGGAAAGTTAATTCGGAATTTTCTTCGGAATACATGCTGGACTAGAGGAATAGAGGTGGAACATGCATaGTCAGTGGTGAGGTGGAGA +
Preference number: 4 (lower is better)
Translates to: IGKLIRNFLRNTCWTRGIEVEHA*SVVRWR
Trigger: TCTCCACCTCACCACTGATCATGCATGTTCCACCTC...TATTCCTCTAGTCCAGCATGTATTCCGAAGAAAATTCCGAATTAACTTTCCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579951.2
CDS-3UTR GCA 90 bp AAAGCAAGATTGGAAGCATTACATATTTCCAGAGGGTCAGAGAGTCATTACTGTATATTCGAGCTGTTTTaGAGCCCTGGCAGCAAACTC +
Preference number: 4 (lower is better)
Translates to: KARLEALHISRGSESHYCIFELF*SPGSKL
Trigger: GAGTTTGCTGCCAGGGCTGCAAAACAGCTCGAATAT...ACAGTAATGACTCTCTGACCCTCTGGAAATATGTAATGCTTCCAATCTTGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000544123.5
ENST00000637651.1
CDS-3UTR GCA 90 bp GACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCTGGTTTTTTAGTGTGGTTTGGTaGAAAGCGGAACTCACTAAT +
Preference number: 4 (lower is better)
Translates to: DRYKSVGLEEGTPYRLWFFSVVW*KAELTN
Trigger: ATTAGTGAGTTCCGCTTTGCACCAAACCACACTAAA...AAACCAGAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTC
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp AGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCTGGTTTTCCTTTAGTGTGGTTTGGTaGAAAGCGGAACTCACTAAT +
Preference number: 4 (lower is better)
Translates to: RYKSVGLEEGTPYRLWFSFSVVW*KAELTN
Trigger: ATTAGTGAGTTCCGCTTTGCACCAAACCACACTAAA...GGAAAACCAGAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp TGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTTTAGTGTGGTTTGGTaGAAAGCGGAACTCACTAAT +
Preference number: 4 (lower is better)
Translates to: WTEIFHGQIQVSWVRRGNFSVVW*KAELTN
Trigger: ATTAGTGAGTTCCGCTTTGCACCAAACCACACTAAA...GTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp ATTGCTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCCTCTGTGGCTCTTGTaGAGCTCGATCACTTTGTCT +
Preference number: 4 (lower is better)
Translates to: IALLWEDLSASVFINGQGPLWLL*SSITLS
Trigger: AGACAAAGTGATCGAGCTGCACAAGAGCCACAGAGG...ACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAGCAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp ATTGCTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTATGCATCTCTGCTTCTaGTGGCGTCATTCCTCTGTG +
Preference number: 4 (lower is better)
Translates to: IALLWEDLSASVFINGQGMHLCF*WRHSSV
Trigger: CACAGAGGAATGACGCCAGCAGAAGCAGAGATGCAT...ACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAGCAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp CAATTCTTCTGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGATTTGCGCTTGTGTCCTaGCACTATAACGAAACTTGG +
Preference number: 4 (lower is better)
Translates to: QFFWTEIFHGQIQVSWVRFALVS*HYNETW
Trigger: CCAAGTTTCGTTATAGTGGCAGGACACAAGCGCAAA...TCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCAGAAGAATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp AAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATTTTGCGCTTGTGTCCTaGCACTATAACGAAACTTGG +
Preference number: 4 (lower is better)
Translates to: KFSTDRYKSVGLEEGTPYFALVS*HYNETW
Trigger: CCAAGTTTCGTTATAGTGGCAGGACACAAGCGCAAA...ATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp TCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATTCTTCTGGACTGAAATTTTCGCGTTCAAAGTAAGGTaGTGGGCGATCTATCAACGC +
Preference number: 4 (lower is better)
Translates to: SASVFINGQGQFFWTEIFAFKVR*WAIYQR
Trigger: GCGTTGATAGATCGCCCAGCACCTTACTTTGAACGC...GAAAATTTCAGTCCAGAAGAATTGACCTTGACCATTAATAAAGACACTGGCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp TGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACACATGGTATAACGTTTaGTGGATGAGCGTTCAAAGT +
Preference number: 4 (lower is better)
Translates to: WTEIFHGQIQVSWVRRGNTWYNV*WMSVQS
Trigger: ACTTTGAACGCTCATCCAGCAAACGTTATACCATGT...GTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp CTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATTTTAATGCCTGTGAATaGGGGCTGTGCTGCAGCATC +
Preference number: 4 (lower is better)
Translates to: LYYGKISLPVSLLMVKVNFNACE*GLCCSI
Trigger: GATGCTGCAGCACAGCCCGCATTCACAGGCATTAAA...ATTGACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp TCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATTCTTCTGGACTGAAATTTTCTTTAATGCCTGTGAATaGGGGCTGTGCTGCAGCATC +
Preference number: 4 (lower is better)
Translates to: SASVFINGQGQFFWTEIFFNACE*GLCCSI
Trigger: GATGCTGCAGCACAGCCCGCATTCACAGGCATTAAA...GAAAATTTCAGTCCAGAAGAATTGACCTTGACCATTAATAAAGACACTGGCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp ATTGGAAAGTTAATTCGGAATTTTCTTCGGAATACATGCTGGACTAGAGGAATAAGATGTGATCGTCTGTaGACTCATCAGCACGCCTGG +
Preference number: 4 (lower is better)
Translates to: IGKLIRNFLRNTCWTRGIRCDRL*THQHAW
Trigger: CCAGGCGTGCTGATGAGTGCACAGACGATCACATCT...TATTCCTCTAGTCCAGCATGTATTCCGAAGAAAATTCCGAATTAACTTTCCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579951.2
CDS-3UTR GCA 90 bp TCTAGCTTTACTCCTCCCGGTGAAACACTGCCAAAACTGATGGTTTCCGTCTTCGATGCTGAATCAGATTaGTTTATTATGGGAAGATCT +
Preference number: 4 (lower is better)
Translates to: SSFTPPGETLPKLMVSVFDAESD*FIMGRS
Trigger: AGATCTTCCCATAATAAAGCAATCTGATTCAGCATC...GAAGACGGAAACCATCAGTTTTGGCAGTGTTTCACCGGGAGGAGTAAAGCTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637651.1
CDS-3UTR GCA 90 bp TGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTTAAAGCCAGCAAGATaGTTCAGATGGTCTGGTTTT +
Preference number: 4 (lower is better)
Translates to: WTEIFHGQIQVSWVRRGNLKPAR*FRWSGF
Trigger: AAAACCAGACCATCTGAAGCATCTTGCTGGCTTTAA...GTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544123.5
CDS-3UTR CCA 90 bp AAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATCAGATTCGGTCGTCATaGTTGATTGTTCTGGGATCA +
Preference number: 4 (lower is better)
Translates to: KFSTDRYKSVGLEEGTPYQIRSS*LIVLGS
Trigger: TGATCCCAGAACAATCAACCATGACGACCGAATCTG...ATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
CDS-3UTR CCA 90 bp AAAGCAAGATTGGAAGCATTACATATTTCCAGAGGGTCAGAGAGTCATTACTGTACAGCACTTGTCCTCTaGAGCGTTTCTCTACATCAC +
Preference number: 4 (lower is better)
Translates to: KARLEALHISRGSESHYCTALVL*SVSLHH
Trigger: GTGATGTAGAGAAACGCTCCAGAGGACAAGTGCTGT...ACAGTAATGACTCTCTGACCCTCTGGAAATATGTAATGCTTCCAATCTTGCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000544123.5
ENST00000637651.1
CDS-3UTR CCA 90 bp ATGAATTCTGTTGGTTTTCGCGCAGACTCTAATAAACTGAAGATTTCAGAGCCAACAGCACTTGTCCTCTaGAGCGTTTCTCTACATCAC +
Preference number: 4 (lower is better)
Translates to: MNSVGFRADSNKLKISEPTALVL*SVSLHH
Trigger: GTGATGTAGAGAAACGCTCCAGAGGACAAGTGCTGT...TGGCTCTGAAATCTTCAGTTTATTAGAGTCTGCGCGAAAACCAACAGAATTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637651.1
CDS-3UTR CCA 90 bp TCTTCTGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGTTCTTTAGTGTGGTTTaGTGCAAAGCGGAACTCACT +
Preference number: 4 (lower is better)
Translates to: SSGLKFSTDRYKSVGLEEFFSVV*CKAELT
Trigger: AGTGAGTTCCGCTTTGCACCAAACCACACTAAAGAA...CTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCAGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp GGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATTCTTCTGGATTCTTTAGTGTGGTTTaGTGCAAAGCGGAACTCACT +
Preference number: 4 (lower is better)
Translates to: GKISLPVSLLMVKVNSSGFFSVV*CKAELT
Trigger: AGTGAGTTCCGCTTTGCACCAAACCACACTAAAGAA...TCCAGAAGAATTGACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp CGTTGCTTCATGCATTATCGGTTTAGTGATGCTGAATCAGATTGCTTTATTATGGGCAGCTCGATGGTTTaGCAGCTTAAACCCAATGGT +
Preference number: 4 (lower is better)
Translates to: RCFMHYRFSDAESDCFIMGSSMV*QLKPNG
Trigger: ACCATTGGGTTTAAGCTGCCAAACCATCGAGCTGCC...CATAATAAAGCAATCTGATTCAGCATCACTAAACCGATAATGCATGAAGCAACG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp TCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATTCTTCTGGACTGAAATTTTCGGCAGCTCGATGGTTTaGCAGCTTAAACCCAATGGT +
Preference number: 4 (lower is better)
Translates to: SASVFINGQGQFFWTEIFGSSMV*QLKPNG
Trigger: ACCATTGGGTTTAAGCTGCCAAACCATCGAGCTGCC...GAAAATTTCAGTCCAGAAGAATTGACCTTGACCATTAATAAAGACACTGGCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp GTTGCTTCATGCATTATCGGTTTAGTGATGCTGAATCAGATTGCTTTATTATGGGGCAGCTCGATGGTTTaGCAGCTTAAACCCAATGGT +
Preference number: 4 (lower is better)
Translates to: VASCIIGLVMLNQIALLWGSSMV*QLKPNG
Trigger: ACCATTGGGTTTAAGCTGCCAAACCATCGAGCTGCC...CCATAATAAAGCAATCTGATTCAGCATCACTAAACCGATAATGCATGAAGCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp TTGCTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCCTTTCCATAAACGCTTaGCAGCTCGATGGTTTGGCA +
Preference number: 4 (lower is better)
Translates to: LLYYGKISLPVSLLMVKVLSINA*QLDGLA
Trigger: TGCCAAACCATCGAGCTGCCAAGCGTTTATGGAAAG...GACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp GGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATTCTTCTGGAAGGTTAGGAATTTCTTaGGAGGTGCTTCTGGTAACA +
Preference number: 4 (lower is better)
Translates to: GKISLPVSLLMVKVNSSGRLGIS*EVLLVT
Trigger: TGTTACCAGAAGCACCTCCCAAGAAATTCCTAACCT...TCCAGAAGAATTGACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp AAAGCAAGATTGGAAGCATTACATATTTCCAGAGGGTCAGAGAGTCATTACTGTGATCTATCAACGCACTaGCTCTTCTCGTTTGCGCTT +
Preference number: 4 (lower is better)
Translates to: KARLEALHISRGSESHYCDLSTH*LFSFAL
Trigger: AAGCGCAAACGAGAAGAGCCAGTGCGTTGATAGATC...ACAGTAATGACTCTCTGACCCTCTGGAAATATGTAATGCTTCCAATCTTGCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000544123.5
ENST00000637651.1
CDS-3UTR CCA 90 bp GTGTTACATGAGACCACGGTTTATATTGTTGGTTATGAACGTGCAGGTATAGCTTTCAAAGTAAGGTGCTaGGCGATCTATCAACGCACT +
Preference number: 4 (lower is better)
Translates to: VLHETTVYIVGYERAGIAFKVRC*AIYQRT
Trigger: AGTGCGTTGATAGATCGCCCAGCACCTTACTTTGAA...AGCTATACCTGCACGTTCATAACCAACAATATAAACCGTGGTCTCATGTAACAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp TGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTGGTATAACGTTTGCTaGATGAGCGTTCAAAGTAAG +
Preference number: 4 (lower is better)
Translates to: WTEIFHGQIQVSWVRRGNWYNVC*MSVQSK
Trigger: CTTACTTTGAACGCTCATCCAGCAAACGTTATACCA...GTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp GAACTCCATATAGGCTCTGGTTTTCCTAACGGTTTGCATGACTGCATTCATGTGTGGTATAACGTTTGCTaGATGAGCGTTCAAAGTAAG +
Preference number: 4 (lower is better)
Translates to: ELHIGSGFPNGLHDCIHVWYNVC*MSVQSK
Trigger: CTTACTTTGAACGCTCATCCAGCAAACGTTATACCA...CACATGAATGCAGTCATGCAAACCGTTAGGAAAACCAGAGCCTATATGGAGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp GTTGCTTCATGCATTATCGGTTTAGTGATGCTGAATCAGATTGCTTTATTATGGTTTGTTGTGGCGTACTaGCCAGTACCAACCTCTGCA +
Preference number: 4 (lower is better)
Translates to: VASCIIGLVMLNQIALLWFVVAY*PVPTSA
Trigger: TGCAGAGGTTGGTACTGGCCAGTACGCCACAACAAA...CCATAATAAAGCAATCTGATTCAGCATCACTAAACCGATAATGCATGAAGCAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp AGCAAGATTGGAAGCATTACATATTTCCAGAGGGTCAGAGAGTCATTACTGTTTAGATGCCTTTTGTTGTaGCGTACTGGCCAGTACCAA +
Preference number: 4 (lower is better)
Translates to: SKIGSITYFQRVRESLLFRCLLL*RTGQYQ
Trigger: TTGGTACTGGCCAGTACGCCACAACAAAAGGCATCT...AAACAGTAATGACTCTCTGACCCTCTGGAAATATGTAATGCTTCCAATCTTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000544123.5
ENST00000637651.1
CDS-3UTR CCA 90 bp TCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATTCTTCTGGACTGAAATTTTCCCGTCTCTATTCCACTaGACTCCGTCTTGGTTTCCA +
Preference number: 4 (lower is better)
Translates to: SASVFINGQGQFFWTEIFPSLFH*TPSWFP
Trigger: TGGAAACCAAGACGGAGTCCAGTGGAATAGAGACGG...GAAAATTTCAGTCCAGAAGAATTGACCTTGACCATTAATAAAGACACTGGCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp CAAAGCAAGATTGGAAGCATTACATATTTCCAGAGGGTCAGAGAGTCATTACTGTTTCTGAAATGTGGATaGCTGCACTCTGCTCCTCTT +
Preference number: 4 (lower is better)
Translates to: QSKIGSITYFQRVRESLLFLKCG*LHSAPL
Trigger: AAGAGGAGCAGAGTGCAGCCATCCACATTTCAGAAA...CAGTAATGACTCTCTGACCCTCTGGAAATATGTAATGCTTCCAATCTTGCTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000544123.5
ENST00000637651.1
CDS-3UTR CCA 90 bp AAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAAAGTTTCTGAAATGTaGATGGCTGCACTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: KFSTDRYKSVGLEEGTPYKVSEM*MAALCS
Trigger: GGAGCAGAGTGCAGCCATCCACATTTCAGAAACTTT...ATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp CAATTCTTCTGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAAAGTTTCTGAAATGTaGATGGCTGCACTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: QFFWTEIFHGQIQVSWVRKVSEM*MAALCS
Trigger: GGAGCAGAGTGCAGCCATCCACATTTCAGAAACTTT...TCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCAGAAGAATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp CAATTCTTCTGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGATTCGGTGTGAACTACTaGCACTTCCTTCGTGGAAAT +
Preference number: 4 (lower is better)
Translates to: QFFWTEIFHGQIQVSWVRFGVNY*HFLRGN
Trigger: ATTTCCACGAAGGAAGTGCCAGTAGTTCACACCGAA...TCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCAGAAGAATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp CAAAGCAAGATTGGAAGCATTACATATTTCCAGAGGGTCAGAGAGTCATTACTGTTCGGTGTGAACTACTaGCACTTCCTTCGTGGAAAT +
Preference number: 4 (lower is better)
Translates to: QSKIGSITYFQRVRESLLFGVNY*HFLRGN
Trigger: ATTTCCACGAAGGAAGTGCCAGTAGTTCACACCGAA...CAGTAATGACTCTCTGACCCTCTGGAAATATGTAATGCTTCCAATCTTGCTTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000544123.5
ENST00000637651.1
CDS-3UTR CCA 90 bp TGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACATCTCTGTCTCTTTATaGACCACTACTTTGGTCACT +
Preference number: 4 (lower is better)
Translates to: WTEIFHGQIQVSWVRRGNISVSL*TTTLVT
Trigger: AGTGACCAAAGTAGTGGTCCATAAAGAGACAGAGAT...GTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp GAACTCCATATAGGCTCTGGTTTTCCTAACGGTTTGCATGACTGCATTCATGTGATCTCTGTCTCTTTATaGACCACTACTTTGGTCACT +
Preference number: 4 (lower is better)
Translates to: ELHIGSGFPNGLHDCIHVISVSL*TTTLVT
Trigger: AGTGACCAAAGTAGTGGTCCATAAAGAGACAGAGAT...CACATGAATGCAGTCATGCAAACCGTTAGGAAAACCAGAGCCTATATGGAGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp AGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCTGGTTTTCCATCTCTGTCTCTTTATaGACCACTACTTTGGTCACT +
Preference number: 4 (lower is better)
Translates to: RYKSVGLEEGTPYRLWFSISVSL*TTTLVT
Trigger: AGTGACCAAAGTAGTGGTCCATAAAGAGACAGAGAT...GGAAAACCAGAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp CAATTCTTCTGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGACAGATACAAGTCAGTTaGGTTAGAAGAGGGAACTCC +
Preference number: 4 (lower is better)
Translates to: QFFWTEIFHGQIQVSWVRQIQVS*VRRGNS
Trigger: GGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTG...TCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCAGAAGAATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp GAACTCCATATAGGCTCTGGTTTTCCTAACGGTTTGCATGACTGCATTCATGTGCAAGGTCAATTCTTCTaGACTGAAATTTTCCACGGA +
Preference number: 4 (lower is better)
Translates to: ELHIGSGFPNGLHDCIHVQGQFF*TEIFHG
Trigger: TCCGTGGAAAATTTCAGTCCAGAAGAATTGACCTTG...CACATGAATGCAGTCATGCAAACCGTTAGGAAAACCAGAGCCTATATGGAGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp GACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCTGGTTTCAAGGTCAATTCTTCTaGACTGAAATTTTCCACGGA +
Preference number: 4 (lower is better)
Translates to: DRYKSVGLEEGTPYRLWFQGQFF*TEIFHG
Trigger: TCCGTGGAAAATTTCAGTCCAGAAGAATTGACCTTG...AAACCAGAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp GACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCTGGTTTCAGATTGCTTTATTATaGGAAGATCTCTCTGCCAGT +
Preference number: 4 (lower is better)
Translates to: DRYKSVGLEEGTPYRLWFQIALL*EDLSAS
Trigger: ACTGGCAGAGAGATCTTCCCATAATAAAGCAATCTG...AAACCAGAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp TGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACCAGATTGCTTTATTATaGGAAGATCTCTCTGCCAGT +
Preference number: 4 (lower is better)
Translates to: WTEIFHGQIQVSWVRRGNQIALL*EDLSAS
Trigger: ACTGGCAGAGAGATCTTCCCATAATAAAGCAATCTG...GTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp AGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCTGGTTTTCCCAGATTGCTTTATTATaGGAAGATCTCTCTGCCAGT +
Preference number: 4 (lower is better)
Translates to: RYKSVGLEEGTPYRLWFSQIALL*EDLSAS
Trigger: ACTGGCAGAGAGATCTTCCCATAATAAAGCAATCTG...GGAAAACCAGAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp ATTGCTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTTTTGTTGTGGCGTACTaGCCAGTACCAACCTCTCCA +
Preference number: 4 (lower is better)
Translates to: IALLWEDLSASVFINGQGFVVAY*PVPTSP
Trigger: TGGAGAGGTTGGTACTGGCCAGTACGCCACAACAAA...ACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAGCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000341928.7
CDS-3UTR CCA 90 bp ATTGCTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTGGACGGCTCATAACCTaGCAGTTTGCAGTCATTCTC +
Preference number: 4 (lower is better)
Translates to: IALLWEDLSASVFINGQGGRLIT*QFAVIL
Trigger: GAGAATGACTGCAAACTGCCAGGTTATGAGCCGTCC...ACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAGCAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341928.7
CDS-3UTR CCA 90 bp TCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATTCTTCTGGACTGAAATTTTCCTGAGACTCAAGGAATaGAGCGCTTCCTTGCTGCAA +
Preference number: 4 (lower is better)
Translates to: SASVFINGQGQFFWTEIFLRLKE*SASLLQ
Trigger: TTGCAGCAAGGAAGCGCTCCATTCCTTGAGTCTCAG...GAAAATTTCAGTCCAGAAGAATTGACCTTGACCATTAATAAAGACACTGGCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400111.8
ENST00000637651.1
CDS-3UTR CCA 90 bp CTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATCTGAGACTCAAGGAATaGAGCGCTTCCTTGCTGCAA +
Preference number: 4 (lower is better)
Translates to: LYYGKISLPVSLLMVKVNLRLKE*SASLLQ
Trigger: TTGCAGCAAGGAAGCGCTCCATTCCTTGAGTCTCAG...ATTGACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400111.8
ENST00000637651.1
CDS-3UTR CCA 90 bp CCTATGAATTCTGTTGGTTTTCGCGCAGACTCTAATAAACTGAAGATTTCAGAGAGCAACGGTAAAGGCTaGTTCCTGGGAATATCTCCA +
Preference number: 4 (lower is better)
Translates to: PMNSVGFRADSNKLKISESNGKG*FLGISP
Trigger: TGGAGATATTCCCAGGAACCAGCCTTTACCGTTGCT...CTCTGAAATCTTCAGTTTATTAGAGTCTGCGCGAAAACCAACAGAATTCATAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637651.1
CDS-3UTR TCA 90 bp GAACTCCATATAGGCTCTGGTTTTCCTAACGGTTTGCATGACTGCATTCATGTGCTGCTAGATGATTTCTaGGAAAGTTTATCGTCTTCT +
Preference number: 4 (lower is better)
Translates to: ELHIGSGFPNGLHDCIHVLLDDF*ESLSSS
Trigger: AGAAGACGATAAACTTTCTCAGAAATCATCTAGCAG...CACATGAATGCAGTCATGCAAACCGTTAGGAAAACCAGAGCCTATATGGAGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR TCA 90 bp ACACACTTTATCAAACAGCACTTGTCCTCTGGAGCGTTTCTCTACATCACAGGTCTGCTAGATGATTTCTaGGAAAGTTTATCGTCTTCT +
Preference number: 4 (lower is better)
Translates to: THFIKQHLSSGAFLYITGLLDDF*ESLSSS
Trigger: AGAAGACGATAAACTTTCTCAGAAATCATCTAGCAG...ACCTGTGATGTAGAGAAACGCTCCAGAGGACAAGTGCTGTTTGATAAAGTGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580866.2
CDS-3UTR TCA 90 bp CAATTCTTCTGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGATCTGAGTCCTTAGCATaGTGTAAATCTACCCCATAC +
Preference number: 4 (lower is better)
Translates to: QFFWTEIFHGQIQVSWVRSESLA*CKSTPY
Trigger: GTATGGGGTAGATTTACATCATGCTAAGGACTCAGA...TCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCAGAAGAATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR TCA 90 bp GTGTTACATGAGACCACGGTTTATATTGTTGGTTATGAACGTGCAGGTATAGCTTCTGAGTCCTTAGCATaGTGTAAATCTACCCCATAC +
Preference number: 4 (lower is better)
Translates to: VLHETTVYIVGYERAGIASESLA*CKSTPY
Trigger: GTATGGGGTAGATTTACATCATGCTAAGGACTCAGA...AGCTATACCTGCACGTTCATAACCAACAATATAAACCGTGGTCTCATGTAACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR TCA 90 bp AGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCTGGTTTTCCCTGGTAACAGTAGTCTaGAAAATGTATGATGCTCAA +
Preference number: 4 (lower is better)
Translates to: RYKSVGLEEGTPYRLWFSLVTVV*KMYDAQ
Trigger: TTGAGCATCATACATTTTTCAGACTACTGTTACCAG...GGAAAACCAGAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR TCA 90 bp CTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATTTTCAGAGCCATCCATaGGCTTTTCCCCAGAAGACT +
Preference number: 4 (lower is better)
Translates to: LYYGKISLPVSLLMVKVNFQSHP*AFPQKT
Trigger: AGTCTTCTGGGGAAAAGCTCATGGATGGCTCTGAAA...ATTGACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000544123.5
ENST00000637651.1
CDS-3UTR TCA 90 bp ATTGCTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTAAACACTGCCAAAACTaGTGGTTTCCGTCTTCACCG +
Preference number: 4 (lower is better)
Translates to: IALLWEDLSASVFINGQGKHCQN*WFPSSP
Trigger: CGGTGAAGACGGAAACCATCAGTTTTGGCAGTGTTT...ACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAGCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR TCA 90 bp CTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATCTTTACTCCTCCCGGTaGAACACTGCCAAAACTGAT +
Preference number: 4 (lower is better)
Translates to: LYYGKISLPVSLLMVKVNLYSSR*NTAKTD
Trigger: ATCAGTTTTGGCAGTGTTTCACCGGGAGGAGTAAAG...ATTGACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR TCA 90 bp TCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATTCTTCTGGACTGAAATTTTCCTTTACTCCTCCCGGTaGAACACTGCCAAAACTGAT +
Preference number: 4 (lower is better)
Translates to: SASVFINGQGQFFWTEIFLYSSR*NTAKTD
Trigger: ATCAGTTTTGGCAGTGTTTCACCGGGAGGAGTAAAG...GAAAATTTCAGTCCAGAAGAATTGACCTTGACCATTAATAAAGACACTGGCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR TCA 90 bp TCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATTCTTCTGGACTGAAATTTTCGTTTTGGTTTCGGTGTaGACTACTGGCACTTCCTTC +
Preference number: 4 (lower is better)
Translates to: SASVFINGQGQFFWTEIFVLVSV*TTGTSF
Trigger: GAAGGAAGTGCCAGTAGTTCACACCGAAACCAAAAC...GAAAATTTCAGTCCAGAAGAATTGACCTTGACCATTAATAAAGACACTGGCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR TCA 90 bp GAGGTGGAGACTTATGAGCTAGATCTATATCCACAATTTACAAATGAGGTACAAGTTTTGGTTTCGGTGTaGACTACTGGCACTTCCTTC +
Preference number: 4 (lower is better)
Translates to: EVETYELDLYPQFTNEVQVLVSV*TTGTSF
Trigger: GAAGGAAGTGCCAGTAGTTCACACCGAAACCAAAAC...TTGTACCTCATTTGTAAATTGTGGATATAGATCTAGCTCATAAGTCTCCACCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579951.2
CDS-3UTR TCA 90 bp AGTCACAATCTTTTTCAAATCACCATCAACTACCTCAGTTGGTATTCTGTCTACGTTTTGGTTTCGGTGTaGACTACTGGCACTTCCTTC +
Preference number: 4 (lower is better)
Translates to: SHNLFQITINYLSWYSVYVLVSV*TTGTSF
Trigger: GAAGGAAGTGCCAGTAGTTCACACCGAAACCAAAAC...GTAGACAGAATACCAACTGAGGTAGTTGATGGTGATTTGAAAAAGATTGTGACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637651.1
CDS-3UTR TCA 90 bp GGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATTCTTCTGGAGTGATGATTCATATGTaGTGGTTTTGGTTTCGGTGT +
Preference number: 4 (lower is better)
Translates to: GKISLPVSLLMVKVNSSGVMIHM*WFWFRC
Trigger: ACACCGAAACCAAAACCATCACATATGAATCATCAC...TCCAGAAGAATTGACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR TCA 90 bp TCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATTCTTCTGGACTGAAATTTTCTGGTGGTTTCAGATGTaGTCGTCTGTGCACTCATCA +
Preference number: 4 (lower is better)
Translates to: SASVFINGQGQFFWTEIFWWFQM*SSVHSS
Trigger: TGATGAGTGCACAGACGATCACATCTGAAACCACCA...GAAAATTTCAGTCCAGAAGAATTGACCTTGACCATTAATAAAGACACTGGCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR TCA 90 bp CTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATTGGTGGTTTCAGATGTaGTCGTCTGTGCACTCATCA +
Preference number: 4 (lower is better)
Translates to: LYYGKISLPVSLLMVKVNWWFQM*SSVHSS
Trigger: TGATGAGTGCACAGACGATCACATCTGAAACCACCA...ATTGACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR TCA 90 bp AAAGCAAGATTGGAAGCATTACATATTTCCAGAGGGTCAGAGAGTCATTACTGTCTCCATCTTCTGGTGTaGTCTCTGTCTCTTTATGGA +
Preference number: 4 (lower is better)
Translates to: KARLEALHISRGSESHYCLHLLV*SLSLYG
Trigger: TCCATAAAGAGACAGAGATCACACCAGAAGATGGAG...ACAGTAATGACTCTCTGACCCTCTGGAAATATGTAATGCTTCCAATCTTGCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000637651.1
CDS-3UTR TCA 90 bp TCTTCTGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGTCAATTCTTCTGGACTaGAATTTTCCACGGACAGAT +
Preference number: 4 (lower is better)
Translates to: SSGLKFSTDRYKSVGLEESILLD*NFPRTD
Trigger: ATCTGTCCGTGGAAAATTTCAGTCCAGAAGAATTGA...CTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCAGAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR TCA 90 bp CAATTCTTCTGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAACGTGCAGGTATAGCTaGAAACTGAGACATTTTGTG +
Preference number: 4 (lower is better)
Translates to: QFFWTEIFHGQIQVSWVRTCRYS*KLRHFV
Trigger: CACAAAATGTCTCAGTTTTCAGCTATACCTGCACGT...TCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCAGAAGAATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR TCA 90 bp ATGAATTCTGTTGGTTTTCGCGCAGACTCTAATAAACTGAAGATTTCAGAGCCATTGGCACATCTAATCTaGGGAAAATCTGACACACCG +
Preference number: 4 (lower is better)
Translates to: MNSVGFRADSNKLKISEPLAHLI*GKSDTP
Trigger: CGGTGTGTCAGATTTTCCTCAGATTAGATGTGCCAA...TGGCTCTGAAATCTTCAGTTTATTAGAGTCTGCGCGAAAACCAACAGAATTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637651.1
CDS-3UTR TCA 90 bp AGCAAGATTGGAAGCATTACATATTTCCAGAGGGTCAGAGAGTCATTACTGTTTTGTTTGGTTTTTACCTaGGACTCAAGGAATGGAGCG +
Preference number: 4 (lower is better)
Translates to: SKIGSITYFQRVRESLLFCLVFT*DSRNGA
Trigger: CGCTCCATTCCTTGAGTCTCAGGTAAAAACCAAACA...AAACAGTAATGACTCTCTGACCCTCTGGAAATATGTAATGCTTCCAATCTTGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637651.1
CDS-3UTR GCA 90 bp CTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATATATTCGAGCTGTTTTaGAGCCCTGGCAGCAAACTC +
Preference number: 4 (lower is better)
Translates to: LYYGKISLPVSLLMVKVNIFELF*SPGSKL
Trigger: GAGTTTGCTGCCAGGGCTGCAAAACAGCTCGAATAT...ATTGACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp GTTGCTTCATGCATTATCGGTTTAGTGATGCTGAATCAGATTGCTTTATTATGGATATTCGAGCTGTTTTaGAGCCCTGGCAGCAAACTC +
Preference number: 4 (lower is better)
Translates to: VASCIIGLVMLNQIALLWIFELF*SPGSKL
Trigger: GAGTTTGCTGCCAGGGCTGCAAAACAGCTCGAATAT...CCATAATAAAGCAATCTGATTCAGCATCACTAAACCGATAATGCATGAAGCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp ATTGCTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTATATTCGAGCTGTTTTaGAGCCCTGGCAGCAAACTC +
Preference number: 4 (lower is better)
Translates to: IALLWEDLSASVFINGQGIFELF*SPGSKL
Trigger: GAGTTTGCTGCCAGGGCTGCAAAACAGCTCGAATAT...ACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAGCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp TGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACAGTATCACTTTGCACTaGATGCTTTTAGGCTTTTTG +
Preference number: 4 (lower is better)
Translates to: WTEIFHGQIQVSWVRRGNSITLH*MLLGFL
Trigger: CAAAAAGCCTAAAAGCATGCAGTGCAAAGTGATACT...GTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp AGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCTGGTTTTCCAGTATCACTTTGCACTaGATGCTTTTAGGCTTTTTG +
Preference number: 4 (lower is better)
Translates to: RYKSVGLEEGTPYRLWFSSITLH*MLLGFL
Trigger: CAAAAAGCCTAAAAGCATGCAGTGCAAAGTGATACT...GGAAAACCAGAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp ACACACTTTATCAAACAGCACTTGTCCTCTGGAGCGTTTCTCTACATCACAGGTAGTATCACTTTGCACTaGATGCTTTTAGGCTTTTTG +
Preference number: 4 (lower is better)
Translates to: THFIKQHLSSGAFLYITGSITLH*MLLGFL
Trigger: CAAAAAGCCTAAAAGCATGCAGTGCAAAGTGATACT...ACCTGTGATGTAGAGAAACGCTCCAGAGGACAAGTGCTGTTTGATAAAGTGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000580866.2
CDS-3UTR GCA 90 bp TCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATTCTTCTGGACTGAAATTTTCCAAGAAATGCATCTCTaGTTCTGCTGGCGTCATTCC +
Preference number: 4 (lower is better)
Translates to: SASVFINGQGQFFWTEIFQEMHL*FCWRHS
Trigger: GGAATGACGCCAGCAGAAGCAGAGATGCATTTCTTG...GAAAATTTCAGTCCAGAAGAATTGACCTTGACCATTAATAAAGACACTGGCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp AGCAAGATTGGAAGCATTACATATTTCCAGAGGGTCAGAGAGTCATTACTGTTTTTTGCGCTTGTGTCCTaGCACTATAACGAAACTTGG +
Preference number: 4 (lower is better)
Translates to: SKIGSITYFQRVRESLLFFALVS*HYNETW
Trigger: CCAAGTTTCGTTATAGTGGCAGGACACAAGCGCAAA...AAACAGTAATGACTCTCTGACCCTCTGGAAATATGTAATGCTTCCAATCTTGCT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000544123.5
ENST00000637651.1
CDS-3UTR GCA 90 bp CGTTGCTTCATGCATTATCGGTTTAGTGATGCTGAATCAGATTGCTTTATTATGGCCAGTACCAACCTCTaGAGCAGACATAGAATCCTT +
Preference number: 4 (lower is better)
Translates to: RCFMHYRFSDAESDCFIMASTNL*SRHRIL
Trigger: AAGGATTCTATGTCTGCTGCAGAGGTTGGTACTGGC...CATAATAAAGCAATCTGATTCAGCATCACTAAACCGATAATGCATGAAGCAACG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp ATTGCTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTGCCAGTACCAACCTCTaGAGCAGACATAGAATCCTT +
Preference number: 4 (lower is better)
Translates to: IALLWEDLSASVFINGQGASTNL*SRHRIL
Trigger: AAGGATTCTATGTCTGCTGCAGAGGTTGGTACTGGC...ACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAGCAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp GTGTTACATGAGACCACGGTTTATATTGTTGGTTATGAACGTGCAGGTATAGCTTTCTTGTCTCTGAAATaGCCCCTTTCACAGTTTTGG +
Preference number: 4 (lower is better)
Translates to: VLHETTVYIVGYERAGIAFLSLK*PLSQFW
Trigger: CCAAAACTGTGAAAGGGGGCATTTCAGAGACAAGAA...AGCTATACCTGCACGTTCATAACCAACAATATAAACCGTGGTCTCATGTAACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp TGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACATGACTGCATTCATGTaGAAGCTAAGTTATTCCTCT +
Preference number: 4 (lower is better)
Translates to: WTEIFHGQIQVSWVRRGNMTAFM*KLSYSS
Trigger: AGAGGAATAACTTAGCTTGCACATGAATGCAGTCAT...GTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp GACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCTGGTTTGGAGCGCTTCCTTGCTaGAAAAATATAACTTTTTCA +
Preference number: 4 (lower is better)
Translates to: DRYKSVGLEEGTPYRLWFGALPC*KNITFS
Trigger: TGAAAAAGTTATATTTTTGCAGCAAGGAAGCGCTCC...AAACCAGAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000400111.8
ENST00000637651.1
CDS-3UTR GCA 90 bp GTTGCTTCATGCATTATCGGTTTAGTGATGCTGAATCAGATTGCTTTATTATGGGATCACCAGTTTTACTaGTCACGGTCACCACCTTGT +
Preference number: 4 (lower is better)
Translates to: VASCIIGLVMLNQIALLWDHQFY*SRSPPC
Trigger: ACAAGGTGGTGACCGTGAGCAGTAAAACTGGTGATC...CCATAATAAAGCAATCTGATTCAGCATCACTAAACCGATAATGCATGAAGCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400111.8
ENST00000637651.1
CDS-3UTR GCA 90 bp ATTGCTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTTTTTCCCCAGAAGACTaGTTAGTCACTACTCGGGAG +
Preference number: 4 (lower is better)
Translates to: IALLWEDLSASVFINGQGFSPED*LVTTRE
Trigger: CTCCCGAGTAGTGACTAAGCAGTCTTCTGGGGAAAA...ACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAGCAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400111.8
CDS-3UTR GCA 90 bp GTGTTACATGAGACCACGGTTTATATTGTTGGTTATGAACGTGCAGGTATAGCTTGGCATCCCGTTCTATaGGAATCCTTTAAAACCCAA +
Preference number: 4 (lower is better)
Translates to: VLHETTVYIVGYERAGIAWHPVL*ESFKTQ
Trigger: TTGGGTTTTAAAGGATTCGCATAGAACGGGATGCCA...AGCTATACCTGCACGTTCATAACCAACAATATAAACCGTGGTCTCATGTAACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545076.5
CDS-3UTR CCA 90 bp GTTGCTTCATGCATTATCGGTTTAGTGATGCTGAATCAGATTGCTTTATTATGGACAGCACTTGTCCTCTaGAGCGTTTCTCTACATCAC +
Preference number: 4 (lower is better)
Translates to: VASCIIGLVMLNQIALLWTALVL*SVSLHH
Trigger: GTGATGTAGAGAAACGCTCCAGAGGACAAGTGCTGT...CCATAATAAAGCAATCTGATTCAGCATCACTAAACCGATAATGCATGAAGCAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp TCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATTCTTCTGGACTGAAATTTTCACAGCACTTGTCCTCTaGAGCGTTTCTCTACATCAC +
Preference number: 4 (lower is better)
Translates to: SASVFINGQGQFFWTEIFTALVL*SVSLHH
Trigger: GTGATGTAGAGAAACGCTCCAGAGGACAAGTGCTGT...GAAAATTTCAGTCCAGAAGAATTGACCTTGACCATTAATAAAGACACTGGCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp TCTTCTGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGTCCAACCAATTCTTCTaGTTTTCAGCATCTCGATAC +
Preference number: 4 (lower is better)
Translates to: SSGLKFSTDRYKSVGLEESNQFF*FSASRY
Trigger: GTATCGAGATGCTGAAAACCAGAAGAATTGGTTGGA...CTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCAGAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp GGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATTCTTCTGGATCCAACCAATTCTTCTaGTTTTCAGCATCTCGATAC +
Preference number: 4 (lower is better)
Translates to: GKISLPVSLLMVKVNSSGSNQFF*FSASRY
Trigger: GTATCGAGATGCTGAAAACCAGAAGAATTGGTTGGA...TCCAGAAGAATTGACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp GACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCTGGTTTTTGGGCAGGGTCTGGTaGATAAAATTTCACATTAAA +
Preference number: 4 (lower is better)
Translates to: DRYKSVGLEEGTPYRLWFLGRVW*IKFHIK
Trigger: TTTAATGTGAAATTTTATCCACCAGACCCTGCCCAA...AAACCAGAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp TGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTTGGGCAGGGTCTGGTaGATAAAATTTCACATTAAA +
Preference number: 4 (lower is better)
Translates to: WTEIFHGQIQVSWVRRGNLGRVW*IKFHIK
Trigger: TTTAATGTGAAATTTTATCCACCAGACCCTGCCCAA...GTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp GTGTTACATGAGACCACGGTTTATATTGTTGGTTATGAACGTGCAGGTATAGCTTTCTTTAGTGTGGTTTaGTGCAAAGCGGAACTCACT +
Preference number: 4 (lower is better)
Translates to: VLHETTVYIVGYERAGIAFFSVV*CKAELT
Trigger: AGTGAGTTCCGCTTTGCACCAAACCACACTAAAGAA...AGCTATACCTGCACGTTCATAACCAACAATATAAACCGTGGTCTCATGTAACAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp TGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACAAATCTTTAGAACCTTaGGCCAGGCAAATCTGTTTA +
Preference number: 4 (lower is better)
Translates to: WTEIFHGQIQVSWVRRGNKSLEP*ARQICL
Trigger: TAAACAGATTTGCCTGGCCCAAGGTTCTAAAGATTT...GTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp GTTGCTTCATGCATTATCGGTTTAGTGATGCTGAATCAGATTGCTTTATTATGGCTTTCCATAAACGCTTaGCAGCTCGATGGTTTGGCA +
Preference number: 4 (lower is better)
Translates to: VASCIIGLVMLNQIALLWLSINA*QLDGLA
Trigger: TGCCAAACCATCGAGCTGCCAAGCGTTTATGGAAAG...CCATAATAAAGCAATCTGATTCAGCATCACTAAACCGATAATGCATGAAGCAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp CGTTGCTTCATGCATTATCGGTTTAGTGATGCTGAATCAGATTGCTTTATTATGCTTTCCATAAACGCTTaGCAGCTCGATGGTTTGGCA +
Preference number: 4 (lower is better)
Translates to: RCFMHYRFSDAESDCFIMLSINA*QLDGLA
Trigger: TGCCAAACCATCGAGCTGCCAAGCGTTTATGGAAAG...CATAATAAAGCAATCTGATTCAGCATCACTAAACCGATAATGCATGAAGCAACG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp AAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGTTAGGAATTTCTTaGGAGGTGCTTCTGGTAACA +
Preference number: 4 (lower is better)
Translates to: KFSTDRYKSVGLEEGTPYRLGIS*EVLLVT
Trigger: TGTTACCAGAAGCACCTCCCAAGAAATTCCTAACCT...ATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp GAACTCCATATAGGCTCTGGTTTTCCTAACGGTTTGCATGACTGCATTCATGTGCACTATAACGAAACTTaGAACCCAAGGTTAGGAATT +
Preference number: 4 (lower is better)
Translates to: ELHIGSGFPNGLHDCIHVHYNET*NPRLGI
Trigger: AATTCCTAACCTTGGGTTCCAAGTTTCGTTATAGTG...CACATGAATGCAGTCATGCAAACCGTTAGGAAAACCAGAGCCTATATGGAGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp GACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCTGGTTTCACTATAACGAAACTTaGAACCCAAGGTTAGGAATT +
Preference number: 4 (lower is better)
Translates to: DRYKSVGLEEGTPYRLWFHYNET*NPRLGI
Trigger: AATTCCTAACCTTGGGTTCCAAGTTTCGTTATAGTG...AAACCAGAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp GGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATTCTTCTGGATGGTATAACGTTTGCTaGATGAGCGTTCAAAGTAAG +
Preference number: 4 (lower is better)
Translates to: GKISLPVSLLMVKVNSSGWYNVC*MSVQSK
Trigger: CTTACTTTGAACGCTCATCCAGCAAACGTTATACCA...TCCAGAAGAATTGACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp ATTGCTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTAGATGCCTTTTGTTGTaGCGTACTGGCCAGTACCAA +
Preference number: 4 (lower is better)
Translates to: IALLWEDLSASVFINGQGRCLLL*RTGQYQ
Trigger: TTGGTACTGGCCAGTACGCCACAACAAAAGGCATCT...ACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAGCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp TCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATTCTTCTGGACTGAAATTTTCAGATGCCTTTTGTTGTaGCGTACTGGCCAGTACCAA +
Preference number: 4 (lower is better)
Translates to: SASVFINGQGQFFWTEIFRCLLL*RTGQYQ
Trigger: TTGGTACTGGCCAGTACGCCACAACAAAAGGCATCT...GAAAATTTCAGTCCAGAAGAATTGACCTTGACCATTAATAAAGACACTGGCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp TTGCTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCTTCGGTGTGAACTACTaGCACTTCCTTCGTGGAAAT +
Preference number: 4 (lower is better)
Translates to: LLYYGKISLPVSLLMVKVFGVNY*HFLRGN
Trigger: ATTTCCACGAAGGAAGTGCCAGTAGTTCACACCGAA...GACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAGCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp GGAAAGTTAATTCGGAATTTTCTTCGGAATACATGCTGGACTAGAGGAATAGCATTCGGTGTGAACTACTaGCACTTCCTTCGTGGAAAT +
Preference number: 4 (lower is better)
Translates to: GKLIRNFLRNTCWTRGIAFGVNY*HFLRGN
Trigger: ATTTCCACGAAGGAAGTGCCAGTAGTTCACACCGAA...TGCTATTCCTCTAGTCCAGCATGTATTCCGAAGAAAATTCCGAATTAACTTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579951.2
CDS-3UTR CCA 90 bp CAATTCTTCTGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAGCTAAGTTATTCCTCTaGTCAATCCTCTCCATCTTC +
Preference number: 4 (lower is better)
Translates to: QFFWTEIFHGQIQVSWVRAKLFL*SILSIF
Trigger: GAAGATGGAGAGGATTGACCAGAGGAATAACTTAGC...TCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCAGAAGAATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp AAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATGCTAAGTTATTCCTCTaGTCAATCCTCTCCATCTTC +
Preference number: 4 (lower is better)
Translates to: KFSTDRYKSVGLEEGTPYAKLFL*SILSIF
Trigger: GAAGATGGAGAGGATTGACCAGAGGAATAACTTAGC...ATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp TCTTCTGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGCAAGGTCAATTCTTCTaGACTGAAATTTTCCACGGA +
Preference number: 4 (lower is better)
Translates to: SSGLKFSTDRYKSVGLEEQGQFF*TEIFHG
Trigger: TCCGTGGAAAATTTCAGTCCAGAAGAATTGACCTTG...CTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCAGAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp GGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATTCTTCTGGACAGATTGCTTTATTATaGGAAGATCTCTCTGCCAGT +
Preference number: 4 (lower is better)
Translates to: GKISLPVSLLMVKVNSSGQIALL*EDLSAS
Trigger: ACTGGCAGAGAGATCTTCCCATAATAAAGCAATCTG...TCCAGAAGAATTGACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp CAAAGCAAGATTGGAAGCATTACATATTTCCAGAGGGTCAGAGAGTCATTACTGTCTCTGTTTCTTCTTTaGTCTCTTCAGGGACAAGTG +
Preference number: 4 (lower is better)
Translates to: QSKIGSITYFQRVRESLLSLFLL*SLQGQV
Trigger: CACTTGTCCCTGAAGAGACCAAAGAAGAAACAGAGA...CAGTAATGACTCTCTGACCCTCTGGAAATATGTAATGCTTCCAATCTTGCTTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400111.8
ENST00000637651.1
CDS-3UTR CCA 90 bp CGTTGCTTCATGCATTATCGGTTTAGTGATGCTGAATCAGATTGCTTTATTATGGTAAAGGCTGGTTCCTaGGAATATCTCCATTCGGAC +
Preference number: 4 (lower is better)
Translates to: RCFMHYRFSDAESDCFIMVKAGS*EYLHSD
Trigger: GTCCGAATGGAGATATTCCCAGGAACCAGCCTTTAC...CATAATAAAGCAATCTGATTCAGCATCACTAAACCGATAATGCATGAAGCAACG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400111.8
ENST00000637651.1
CDS-3UTR CCA 90 bp AAAGCAAGATTGGAAGCATTACATATTTCCAGAGGGTCAGAGAGTCATTACTGTCAGATTCGGTCGTCATaGTTGATTGTTCTCGCAATG +
Preference number: 4 (lower is better)
Translates to: KARLEALHISRGSESHYCQIRSS*LIVLAM
Trigger: CATTGCGAGAACAATCAACCATGACGACCGAATCTG...ACAGTAATGACTCTCTGACCCTCTGGAAATATGTAATGCTTCCAATCTTGCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544123.5
CDS-3UTR CCA 90 bp ATTGCTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTAGTTATTCCTGGTCATaGTCAATGTCTGCATCCCCC +
Preference number: 4 (lower is better)
Translates to: IALLWEDLSASVFINGQGSYSWS*SMSASP
Trigger: GGGGGATGCAGACATTGACCATGACCAGGAATAACT...ACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAGCAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544123.5
CDS-3UTR TCA 90 bp ACATCACAGGTATATTCTGATCCATCGAGAAGTATCACTTTGCACTGCATGCTTTCGTCTTCTAATTGCTaGTATTCGAGCTGTTTTGCA +
Preference number: 4 (lower is better)
Translates to: TSQVYSDPSRSITLHCMLSSSNC*YSSCFA
Trigger: TGCAAAACAGCTCGAATATCAGCAATTAGAAGACGA...AAGCATGCAGTGCAAAGTGATACTTCTCGATGGATCAGAATATACCTGTGATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580866.2
CDS-3UTR TCA 90 bp GGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATTCTTCTGGACTGCTAGATGATTTCTaGGAAAGTTTATCGTCTTCT +
Preference number: 4 (lower is better)
Translates to: GKISLPVSLLMVKVNSSGLLDDF*ESLSSS
Trigger: AGAAGACGATAAACTTTCTCAGAAATCATCTAGCAG...TCCAGAAGAATTGACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR TCA 90 bp TCTTCTGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGCTGCTAGATGATTTCTaGGAAAGTTTATCGTCTTCT +
Preference number: 4 (lower is better)
Translates to: SSGLKFSTDRYKSVGLEELLDDF*ESLSSS
Trigger: AGAAGACGATAAACTTTCTCAGAAATCATCTAGCAG...CTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCAGAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR TCA 90 bp AAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATATCACAGGTATATTCTaGTCCATCGAGAAGTATCAC +
Preference number: 4 (lower is better)
Translates to: KFSTDRYKSVGLEEGTPYITGIF*SIEKYH
Trigger: GTGATACTTCTCGATGGATCAGAATATACCTGTGAT...ATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR TCA 90 bp GTGTTACATGAGACCACGGTTTATATTGTTGGTTATGAACGTGCAGGTATAGCTATCACAGGTATATTCTaGTCCATCGAGAAGTATCAC +
Preference number: 4 (lower is better)
Translates to: VLHETTVYIVGYERAGIAITGIF*SIEKYH
Trigger: GTGATACTTCTCGATGGATCAGAATATACCTGTGAT...AGCTATACCTGCACGTTCATAACCAACAATATAAACCGTGGTCTCATGTAACAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR TCA 90 bp TCTTCTGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGCTGGTAACAGTAGTCTaGAAAATGTATGATGCTCAA +
Preference number: 4 (lower is better)
Translates to: SSGLKFSTDRYKSVGLEELVTVV*KMYDAQ
Trigger: TTGAGCATCATACATTTTTCAGACTACTGTTACCAG...CTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCAGAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR TCA 90 bp CGTTGCTTCATGCATTATCGGTTTAGTGATGCTGAATCAGATTGCTTTATTATGATAACGTTTGCTGGATaGGCGTTCAAAGTAAGGTGC +
Preference number: 4 (lower is better)
Translates to: RCFMHYRFSDAESDCFIMITFAG*AFKVRC
Trigger: GCACCTTACTTTGAACGCTCATCCAGCAAACGTTAT...CATAATAAAGCAATCTGATTCAGCATCACTAAACCGATAATGCATGAAGCAACG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR TCA 90 bp CAAAGCAAGATTGGAAGCATTACATATTTCCAGAGGGTCAGAGAGTCATTACTGCAGACTCTAATAAACTaGAGATTTCAGAGCCATCCA +
Preference number: 4 (lower is better)
Translates to: QSKIGSITYFQRVRESLLQTLIN*RFQSHP
Trigger: TGGATGGCTCTGAAATCTTCAGTTTATTAGAGTCTG...CAGTAATGACTCTCTGACCCTCTGGAAATATGTAATGCTTCCAATCTTGCTTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000544123.5
ENST00000637651.1
CDS-3UTR TCA 90 bp GGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATTCTTCTGGAGTTGAGGACTCAAAATaGGGTTTTTGTTCCAAAGTT +
Preference number: 4 (lower is better)
Translates to: GKISLPVSLLMVKVNSSGVEDSK*GFCSKV
Trigger: AACTTTGGAACAAAAACCTCATTTTGAGTCCTCAAC...TCCAGAAGAATTGACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR TCA 90 bp GTTGCTTCATGCATTATCGGTTTAGTGATGCTGAATCAGATTGCTTTATTATGGTTCCGTCTTCACCGTTaGGGACTCAAAATGAGGTTT +
Preference number: 4 (lower is better)
Translates to: VASCIIGLVMLNQIALLWFRLHR*GLKMRF
Trigger: AAACCTCATTTTGAGTCCTCAACGGTGAAGACGGAA...CCATAATAAAGCAATCTGATTCAGCATCACTAAACCGATAATGCATGAAGCAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR TCA 90 bp CTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATTTCCGTCTTCACCGTTaGGGACTCAAAATGAGGTTT +
Preference number: 4 (lower is better)
Translates to: LYYGKISLPVSLLMVKVNFRLHR*GLKMRF
Trigger: AAACCTCATTTTGAGTCCTCAACGGTGAAGACGGAA...ATTGACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR TCA 90 bp TTAATTCGGAATTTTCTTCGGAATACATGCTGGACTAGAGGAATAGCATTGAAAAAACACTGCCAAAACTaGTGGTTTCCGTCTTCACCG +
Preference number: 4 (lower is better)
Translates to: LIRNFLRNTCWTRGIALKKHCQN*WFPSSP
Trigger: CGGTGAAGACGGAAACCATCAGTTTTGGCAGTGTTT...TTTCAATGCTATTCCTCTAGTCCAGCATGTATTCCGAAGAAAATTCCGAATTAA
40% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000579951.2
CDS-3UTR TCA 90 bp TTAATTCGGAATTTTCTTCGGAATACATGCTGGACTAGAGGAATAGCATTGAAACTTTACTCCTCCCGGTaGAACACTGCCAAAACTGAT +
Preference number: 4 (lower is better)
Translates to: LIRNFLRNTCWTRGIALKLYSSR*NTAKTD
Trigger: ATCAGTTTTGGCAGTGTTTCACCGGGAGGAGTAAAG...TTTCAATGCTATTCCTCTAGTCCAGCATGTATTCCGAAGAAAATTCCGAATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579951.2
CDS-3UTR TCA 90 bp CAAAGCAAGATTGGAAGCATTACATATTTCCAGAGGGTCAGAGAGTCATTACTGGTGATGATTCATATGTaGTGGTTTTGGTTTCGGTGT +
Preference number: 4 (lower is better)
Translates to: QSKIGSITYFQRVRESLLVMIHM*WFWFRC
Trigger: ACACCGAAACCAAAACCATCACATATGAATCATCAC...CAGTAATGACTCTCTGACCCTCTGGAAATATGTAATGCTTCCAATCTTGCTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000544123.5
ENST00000637651.1
CDS-3UTR TCA 90 bp AAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATGTGATGATTCATATGTaGTGGTTTTGGTTTCGGTGT +
Preference number: 4 (lower is better)
Translates to: KFSTDRYKSVGLEEGTPYVMIHM*WFWFRC
Trigger: ACACCGAAACCAAAACCATCACATATGAATCATCAC...ATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR TCA 90 bp TTAATTCGGAATTTTCTTCGGAATACATGCTGGACTAGAGGAATAGCATTGAAATGGTGGTTTCAGATGTaGTCGTCTGTGCACTCATCA +
Preference number: 4 (lower is better)
Translates to: LIRNFLRNTCWTRGIALKWWFQM*SSVHSS
Trigger: TGATGAGTGCACAGACGATCACATCTGAAACCACCA...TTTCAATGCTATTCCTCTAGTCCAGCATGTATTCCGAAGAAAATTCCGAATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579951.2
CDS-3UTR TCA 90 bp TTCAGTGCATTTGCCATTTTTATTTCGCTATGCAGAAACATACATTCACCATGGTTGGCACATCTAATCTaGGGAAAATCTGACACACCG +
Preference number: 4 (lower is better)
Translates to: FSAFAIFISLCRNIHSPWLAHLI*GKSDTP
Trigger: CGGTGTGTCAGATTTTCCTCAGATTAGATGTGCCAA...CCATGGTGAATGTATGTTTCTGCATAGCGAAATAAAAATGGCAAATGCACTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000544123.5
CDS-3UTR TCA 90 bp TCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATTCTTCTGGACTGAAATTTTCTTGGCACATCTAATCTaGGGAAAATCTGACACACCG +
Preference number: 4 (lower is better)
Translates to: SASVFINGQGQFFWTEIFLAHLI*GKSDTP
Trigger: CGGTGTGTCAGATTTTCCTCAGATTAGATGTGCCAA...GAAAATTTCAGTCCAGAAGAATTGACCTTGACCATTAATAAAGACACTGGCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000544123.5
ENST00000637651.1
CDS-3UTR TCA 90 bp TCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATTCTTCTGGACTGAAATTTTCAATTTCTACCCCTTCTaGGTCCTTCTGGTTTTCAGC +
Preference number: 4 (lower is better)
Translates to: SASVFINGQGQFFWTEIFNFYPF*VLLVFS
Trigger: GCTGAAAACCAGAAGGACTCAGAAGGGGTAGAAATT...GAAAATTTCAGTCCAGAAGAATTGACCTTGACCATTAATAAAGACACTGGCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000400111.8
CDS-3UTR GCA 90 bp GGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATTCTTCTGGAAGTATCACTTTGCACTaGATGCTTTTAGGCTTTTTG +
Preference number: 4 (lower is better)
Translates to: GKISLPVSLLMVKVNSSGSITLH*MLLGFL
Trigger: CAAAAAGCCTAAAAGCATGCAGTGCAAAGTGATACT...TCCAGAAGAATTGACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp AAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATACATTAAATGAAAAGTaGCAAGCACCACTTCGAACC +
Preference number: 4 (lower is better)
Translates to: KFSTDRYKSVGLEEGTPYTLNEK*QAPLRT
Trigger: GGTTCGAAGTGGTGCTTGGCACTTTTCATTTAATGT...ATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp GTTGCTTCATGCATTATCGGTTTAGTGATGCTGAATCAGATTGCTTTATTATGGTTTGCGCTTGTGTCCTaGCACTATAACGAAACTTGG +
Preference number: 4 (lower is better)
Translates to: VASCIIGLVMLNQIALLWFALVS*HYNETW
Trigger: CCAAGTTTCGTTATAGTGGCAGGACACAAGCGCAAA...CCATAATAAAGCAATCTGATTCAGCATCACTAAACCGATAATGCATGAAGCAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp TCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATTCTTCTGGACTGAAATTTTCTTTGCGCTTGTGTCCTaGCACTATAACGAAACTTGG +
Preference number: 4 (lower is better)
Translates to: SASVFINGQGQFFWTEIFFALVS*HYNETW
Trigger: CCAAGTTTCGTTATAGTGGCAGGACACAAGCGCAAA...GAAAATTTCAGTCCAGAAGAATTGACCTTGACCATTAATAAAGACACTGGCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp CTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATTTTGCGCTTGTGTCCTaGCACTATAACGAAACTTGG +
Preference number: 4 (lower is better)
Translates to: LYYGKISLPVSLLMVKVNFALVS*HYNETW
Trigger: CCAAGTTTCGTTATAGTGGCAGGACACAAGCGCAAA...ATTGACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp ATTGCTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTTTTTCCCCAGAAGACTaGTTAGTCTCTTCAGGGACA +
Preference number: 4 (lower is better)
Translates to: IALLWEDLSASVFINGQGFSPED*LVSSGT
Trigger: TGTCCCTGAAGAGACTAAGCAGTCTTCTGGGGAAAA...ACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAGCAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000544123.5
CDS-3UTR GCA 90 bp TTGCTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCTTCTTGTCTCTGAAATaGCCCCTTTCACAGTTTTGG +
Preference number: 4 (lower is better)
Translates to: LLYYGKISLPVSLLMVKVFLSLK*PLSQFW
Trigger: CCAAAACTGTGAAAGGGGGCATTTCAGAGACAAGAA...GACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp GACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCTGGTTTGATGCTGAATCAGATTaGTTTATTATGGGAAGATCT +
Preference number: 4 (lower is better)
Translates to: DRYKSVGLEEGTPYRLWFDAESD*FIMGRS
Trigger: AGATCTTCCCATAATAAAGCAATCTGATTCAGCATC...AAACCAGAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp GAACTCCATATAGGCTCTGGTTTTCCTAACGGTTTGCATGACTGCATTCATGTGGATGCTGAATCAGATTaGTTTATTATGGGAAGATCT +
Preference number: 4 (lower is better)
Translates to: ELHIGSGFPNGLHDCIHVDAESD*FIMGRS
Trigger: AGATCTTCCCATAATAAAGCAATCTGATTCAGCATC...CACATGAATGCAGTCATGCAAACCGTTAGGAAAACCAGAGCCTATATGGAGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp GAACTCCATATAGGCTCTGGTTTTCCTAACGGTTTGCATGACTGCATTCATGTGTTTATCGTTGCTTCATaGATTATCGGTTTAGTGATG +
Preference number: 4 (lower is better)
Translates to: ELHIGSGFPNGLHDCIHVFIVAS*IIGLVM
Trigger: CATCACTAAACCGATAATGCATGAAGCAACGATAAA...CACATGAATGCAGTCATGCAAACCGTTAGGAAAACCAGAGCCTATATGGAGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp TGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTTTATCGTTGCTTCATaGATTATCGGTTTAGTGATG +
Preference number: 4 (lower is better)
Translates to: WTEIFHGQIQVSWVRRGNFIVAS*IIGLVM
Trigger: CATCACTAAACCGATAATGCATGAAGCAACGATAAA...GTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp TCTTCTGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAGCGCTTCCTTGCTaGAAAAATATAACTTTTTCA +
Preference number: 4 (lower is better)
Translates to: SSGLKFSTDRYKSVGLEEGALPC*KNITFS
Trigger: TGAAAAAGTTATATTTTTGCAGCAAGGAAGCGCTCC...CTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCAGAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000400111.8
ENST00000637651.1
CDS-3UTR GCA 90 bp CGTTGCTTCATGCATTATCGGTTTAGTGATGCTGAATCAGATTGCTTTATTATGCCAGGAGCAGGTGAGTaGCCTGGTTTACATTTTAAA +
Preference number: 4 (lower is better)
Translates to: RCFMHYRFSDAESDCFIMPGAGE*PGLHFK
Trigger: TTTAAAATGTAAACCAGGGCACTCACCTGCTCCTGG...CATAATAAAGCAATCTGATTCAGCATCACTAAACCGATAATGCATGAAGCAACG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637651.1
CDS-3UTR CCA 90 bp TTCAGTGCATTTGCCATTTTTATTTCGCTATGCAGAAACATACATTCACCATGGCAGATTCGGTCGTCATaGTTGATTGTTCTGGGATCA +
Preference number: 4 (lower is better)
Translates to: FSAFAIFISLCRNIHSPWQIRSS*LIVLGS
Trigger: TGATCCCAGAACAATCAACCATGACGACCGAATCTG...CCATGGTGAATGTATGTTTCTGCATAGCGAAATAAAAATGGCAAATGCACTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341928.7
ENST00000342933.7
CDS-3UTR CCA 90 bp GTTGCTTCATGCATTATCGGTTTAGTGATGCTGAATCAGATTGCTTTATTATGGCAGATTCGGTCGTCATaGTTGATTGTTCTGGGATCA +
Preference number: 4 (lower is better)
Translates to: VASCIIGLVMLNQIALLWQIRSS*LIVLGS
Trigger: TGATCCCAGAACAATCAACCATGACGACCGAATCTG...CCATAATAAAGCAATCTGATTCAGCATCACTAAACCGATAATGCATGAAGCAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
CDS-3UTR CCA 90 bp GGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATTCTTCTGGAAAATCTTTAGAACCTTaGGCCAGGCAAATCTGTTTA +
Preference number: 4 (lower is better)
Translates to: GKISLPVSLLMVKVNSSGKSLEP*ARQICL
Trigger: TAAACAGATTTGCCTGGCCCAAGGTTCTAAAGATTT...TCCAGAAGAATTGACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp TTGCTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCAGGTTAGGAATTTCTTaGGAGGTGCTTCTGGTAACA +
Preference number: 4 (lower is better)
Translates to: LLYYGKISLPVSLLMVKVRLGIS*EVLLVT
Trigger: TGTTACCAGAAGCACCTCCCAAGAAATTCCTAACCT...GACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAGCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp TCTTCTGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGCACTATAACGAAACTTaGAACCCAAGGTTAGGAATT +
Preference number: 4 (lower is better)
Translates to: SSGLKFSTDRYKSVGLEEHYNET*NPRLGI
Trigger: AATTCCTAACCTTGGGTTCCAAGTTTCGTTATAGTG...CTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCAGAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp CGTTGCTTCATGCATTATCGGTTTAGTGATGCTGAATCAGATTGCTTTATTATGTTCAAAGTAAGGTGCTaGGCGATCTATCAACGCACT +
Preference number: 4 (lower is better)
Translates to: RCFMHYRFSDAESDCFIMFKVRC*AIYQRT
Trigger: AGTGCGTTGATAGATCGCCCAGCACCTTACTTTGAA...CATAATAAAGCAATCTGATTCAGCATCACTAAACCGATAATGCATGAAGCAACG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp TCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATTCTTCTGGACTGAAATTTTCTTCAAAGTAAGGTGCTaGGCGATCTATCAACGCACT +
Preference number: 4 (lower is better)
Translates to: SASVFINGQGQFFWTEIFFKVRC*AIYQRT
Trigger: AGTGCGTTGATAGATCGCCCAGCACCTTACTTTGAA...GAAAATTTCAGTCCAGAAGAATTGACCTTGACCATTAATAAAGACACTGGCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp AAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATTGGTATAACGTTTGCTaGATGAGCGTTCAAAGTAAG +
Preference number: 4 (lower is better)
Translates to: KFSTDRYKSVGLEEGTPYWYNVC*MSVQSK
Trigger: CTTACTTTGAACGCTCATCCAGCAAACGTTATACCA...ATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp ATTGCTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTTTTCTGAAATGTGGATaGCTGCACTCTGCTCCTCTT +
Preference number: 4 (lower is better)
Translates to: IALLWEDLSASVFINGQGFLKCG*LHSAPL
Trigger: AAGAGGAGCAGAGTGCAGCCATCCACATTTCAGAAA...ACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAGCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp GGAAAGTTAATTCGGAATTTTCTTCGGAATACATGCTGGACTAGAGGAATAGCACTGGCACTTCCTTCGTaGAAATTTCTAGCTTTACTC +
Preference number: 4 (lower is better)
Translates to: GKLIRNFLRNTCWTRGIALALPS*KFLALL
Trigger: GAGTAAAGCTAGAAATTTCCACGAAGGAAGTGCCAG...TGCTATTCCTCTAGTCCAGCATGTATTCCGAAGAAAATTCCGAATTAACTTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579951.2
CDS-3UTR CCA 90 bp GTTGCTTCATGCATTATCGGTTTAGTGATGCTGAATCAGATTGCTTTATTATGGTTCGGTGTGAACTACTaGCACTTCCTTCGTGGAAAT +
Preference number: 4 (lower is better)
Translates to: VASCIIGLVMLNQIALLWFGVNY*HFLRGN
Trigger: ATTTCCACGAAGGAAGTGCCAGTAGTTCACACCGAA...CCATAATAAAGCAATCTGATTCAGCATCACTAAACCGATAATGCATGAAGCAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp CTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATTTCGGTGTGAACTACTaGCACTTCCTTCGTGGAAAT +
Preference number: 4 (lower is better)
Translates to: LYYGKISLPVSLLMVKVNFGVNY*HFLRGN
Trigger: ATTTCCACGAAGGAAGTGCCAGTAGTTCACACCGAA...ATTGACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp AAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATATCTCTGTCTCTTTATaGACCACTACTTTGGTCACT +
Preference number: 4 (lower is better)
Translates to: KFSTDRYKSVGLEEGTPYISVSL*TTTLVT
Trigger: AGTGACCAAAGTAGTGGTCCATAAAGAGACAGAGAT...ATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp TTGCTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCGCTAAGTTATTCCTCTaGTCAATCCTCTCCATCTTC +
Preference number: 4 (lower is better)
Translates to: LLYYGKISLPVSLLMVKVAKLFL*SILSIF
Trigger: GAAGATGGAGAGGATTGACCAGAGGAATAACTTAGC...GACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAGCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp TCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATTCTTCTGGACTGAAATTTTCCAGATACAAGTCAGTTaGGTTAGAAGAGGGAACTCC +
Preference number: 4 (lower is better)
Translates to: SASVFINGQGQFFWTEIFQIQVS*VRRGNS
Trigger: GGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTG...GAAAATTTCAGTCCAGAAGAATTGACCTTGACCATTAATAAAGACACTGGCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp ATTGCTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCAGATACAAGTCAGTTaGGTTAGAAGAGGGAACTCC +
Preference number: 4 (lower is better)
Translates to: IALLWEDLSASVFINGQGQIQVS*VRRGNS
Trigger: GGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTG...ACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAGCAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp GTGTTACATGAGACCACGGTTTATATTGTTGGTTATGAACGTGCAGGTATAGCTCAAGGTCAATTCTTCTaGACTGAAATTTTCCACGGA +
Preference number: 4 (lower is better)
Translates to: VLHETTVYIVGYERAGIAQGQFF*TEIFHG
Trigger: TCCGTGGAAAATTTCAGTCCAGAAGAATTGACCTTG...AGCTATACCTGCACGTTCATAACCAACAATATAAACCGTGGTCTCATGTAACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp CAAAGCAAGATTGGAAGCATTACATATTTCCAGAGGGTCAGAGAGTCATTACTGCAGATTGCTTTATTATaGGAAGATCTCTCTGCCAGT +
Preference number: 4 (lower is better)
Translates to: QSKIGSITYFQRVRESLLQIALL*EDLSAS
Trigger: ACTGGCAGAGAGATCTTCCCATAATAAAGCAATCTG...CAGTAATGACTCTCTGACCCTCTGGAAATATGTAATGCTTCCAATCTTGCTTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000544123.5
ENST00000637651.1
CDS-3UTR CCA 90 bp CTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATAACATACATTCACCATaGGCTGTGATGCAGGTGATC +
Preference number: 4 (lower is better)
Translates to: LYYGKISLPVSLLMVKVNNIHSP*AVMQVI
Trigger: GATCACCTGCATCACAGCCCATGGTGAATGTATGTT...ATTGACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000544123.5
CDS-3UTR CCA 90 bp CGTTGCTTCATGCATTATCGGTTTAGTGATGCTGAATCAGATTGCTTTATTATGAACATACATTCACCATaGGCTGTGATGCAGGTGATC +
Preference number: 4 (lower is better)
Translates to: RCFMHYRFSDAESDCFIMNIHSP*AVMQVI
Trigger: GATCACCTGCATCACAGCCCATGGTGAATGTATGTT...CATAATAAAGCAATCTGATTCAGCATCACTAAACCGATAATGCATGAAGCAACG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000544123.5
CDS-3UTR CCA 90 bp GACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCTGGTTTATCAACTACCTCAGTTaGTATTCTGTCTACAATAAC +
Preference number: 4 (lower is better)
Translates to: DRYKSVGLEEGTPYRLWFINYLS*YSVYNN
Trigger: GTTATTGTAGACAGAATACCAACTGAGGTAGTTGAT...AAACCAGAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400111.8
ENST00000637651.1
CDS-3UTR TCA 90 bp GTGTTACATGAGACCACGGTTTATATTGTTGGTTATGAACGTGCAGGTATAGCTCTGCTAGATGATTTCTaGGAAAGTTTATCGTCTTCT +
Preference number: 4 (lower is better)
Translates to: VLHETTVYIVGYERAGIALLDDF*ESLSSS
Trigger: AGAAGACGATAAACTTTCTCAGAAATCATCTAGCAG...AGCTATACCTGCACGTTCATAACCAACAATATAAACCGTGGTCTCATGTAACAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR TCA 90 bp TTGCTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCATCACAGGTATATTCTaGTCCATCGAGAAGTATCAC +
Preference number: 4 (lower is better)
Translates to: LLYYGKISLPVSLLMVKVITGIF*SIEKYH
Trigger: GTGATACTTCTCGATGGATCAGAATATACCTGTGAT...GACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAGCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR TCA 90 bp AGCAAGATTGGAAGCATTACATATTTCCAGAGGGTCAGAGAGTCATTACTGTTTATCACAGGTATATTCTaGTCCATCGAGAAGTATCAC +
Preference number: 4 (lower is better)
Translates to: SKIGSITYFQRVRESLLFITGIF*SIEKYH
Trigger: GTGATACTTCTCGATGGATCAGAATATACCTGTGAT...AAACAGTAATGACTCTCTGACCCTCTGGAAATATGTAATGCTTCCAATCTTGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000544123.5
ENST00000637651.1
CDS-3UTR TCA 90 bp GTTGCTTCATGCATTATCGGTTTAGTGATGCTGAATCAGATTGCTTTATTATGGTCTGAGTCCTTAGCATaGTGTAAATCTACCCCATAC +
Preference number: 4 (lower is better)
Translates to: VASCIIGLVMLNQIALLWSESLA*CKSTPY
Trigger: GTATGGGGTAGATTTACATCATGCTAAGGACTCAGA...CCATAATAAAGCAATCTGATTCAGCATCACTAAACCGATAATGCATGAAGCAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR TCA 90 bp ATTGCTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTTCTGAGTCCTTAGCATaGTGTAAATCTACCCCATAC +
Preference number: 4 (lower is better)
Translates to: IALLWEDLSASVFINGQGSESLA*CKSTPY
Trigger: GTATGGGGTAGATTTACATCATGCTAAGGACTCAGA...ACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAGCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR TCA 90 bp AAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATCTGGTAACAGTAGTCTaGAAAATGTATGATGCTCAA +
Preference number: 4 (lower is better)
Translates to: KFSTDRYKSVGLEEGTPYLVTVV*KMYDAQ
Trigger: TTGAGCATCATACATTTTTCAGACTACTGTTACCAG...ATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR TCA 90 bp TTGCTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCCAGACTCTAATAAACTaGAGATTTCAGAGCCATCCA +
Preference number: 4 (lower is better)
Translates to: LLYYGKISLPVSLLMVKVQTLIN*RFQSHP
Trigger: TGGATGGCTCTGAAATCTTCAGTTTATTAGAGTCTG...GACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAGCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000544123.5
ENST00000637651.1
CDS-3UTR TCA 90 bp AGCAAGATTGGAAGCATTACATATTTCCAGAGGGTCAGAGAGTCATTACTGTTTCAGACTCTAATAAACTaGAGATTTCAGAGCCATCCA +
Preference number: 4 (lower is better)
Translates to: SKIGSITYFQRVRESLLFQTLIN*RFQSHP
Trigger: TGGATGGCTCTGAAATCTTCAGTTTATTAGAGTCTG...AAACAGTAATGACTCTCTGACCCTCTGGAAATATGTAATGCTTCCAATCTTGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000544123.5
ENST00000637651.1
CDS-3UTR TCA 90 bp CGTTGCTTCATGCATTATCGGTTTAGTGATGCTGAATCAGATTGCTTTATTATGTTGTTCCAAAGTTTCTaGAATGTGGATGGCTGCACT +
Preference number: 4 (lower is better)
Translates to: RCFMHYRFSDAESDCFIMLFQSF*NVDGCT
Trigger: AGTGCAGCCATCCACATTTCAGAAACTTTGGAACAA...CATAATAAAGCAATCTGATTCAGCATCACTAAACCGATAATGCATGAAGCAACG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR TCA 90 bp TCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATTCTTCTGGACTGAAATTTTCTTGTTCCAAAGTTTCTaGAATGTGGATGGCTGCACT +
Preference number: 4 (lower is better)
Translates to: SASVFINGQGQFFWTEIFLFQSF*NVDGCT
Trigger: AGTGCAGCCATCCACATTTCAGAAACTTTGGAACAA...GAAAATTTCAGTCCAGAAGAATTGACCTTGACCATTAATAAAGACACTGGCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR TCA 90 bp CAAAGCAAGATTGGAAGCATTACATATTTCCAGAGGGTCAGAGAGTCATTACTGGTTGAGGACTCAAAATaGGGTTTTTGTTCCAAAGTT +
Preference number: 4 (lower is better)
Translates to: QSKIGSITYFQRVRESLLVEDSK*GFCSKV
Trigger: AACTTTGGAACAAAAACCTCATTTTGAGTCCTCAAC...CAGTAATGACTCTCTGACCCTCTGGAAATATGTAATGCTTCCAATCTTGCTTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000544123.5
ENST00000637651.1
CDS-3UTR TCA 90 bp CAATTCTTCTGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAGTTGAGGACTCAAAATaGGGTTTTTGTTCCAAAGTT +
Preference number: 4 (lower is better)
Translates to: QFFWTEIFHGQIQVSWVRVEDSK*GFCSKV
Trigger: AACTTTGGAACAAAAACCTCATTTTGAGTCCTCAAC...TCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCAGAAGAATTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR TCA 90 bp TTGCTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCGTGATGATTCATATGTaGTGGTTTTGGTTTCGGTGT +
Preference number: 4 (lower is better)
Translates to: LLYYGKISLPVSLLMVKVVMIHM*WFWFRC
Trigger: ACACCGAAACCAAAACCATCACATATGAATCATCAC...GACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR TCA 90 bp TTGCTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCTCAATTCTTCTGGACTaGAATTTTCCACGGACAGAT +
Preference number: 4 (lower is better)
Translates to: LLYYGKISLPVSLLMVKVSILLD*NFPRTD
Trigger: ATCTGTCCGTGGAAAATTTCAGTCCAGAAGAATTGA...GACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR TCA 90 bp GTTGCTTCATGCATTATCGGTTTAGTGATGCTGAATCAGATTGCTTTATTATGGTTAAGCTCTCTGGATTaGACACAGACCAAAGCAAAC +
Preference number: 4 (lower is better)
Translates to: VASCIIGLVMLNQIALLWLSSLD*TQTKAN
Trigger: GTTTGCTTTGGTCTGTGTTCAATCCAGAGAGCTTAA...CCATAATAAAGCAATCTGATTCAGCATCACTAAACCGATAATGCATGAAGCAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000544123.5
ENST00000637651.1
CDS-3UTR TCA 90 bp ATTGCTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTTTAAGCTCTCTGGATTaGACACAGACCAAAGCAAAC +
Preference number: 4 (lower is better)
Translates to: IALLWEDLSASVFINGQGLSSLD*TQTKAN
Trigger: GTTTGCTTTGGTCTGTGTTCAATCCAGAGAGCTTAA...ACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAGCAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000544123.5
ENST00000637651.1
CDS-3UTR TCA 90 bp ATGAATTCTGTTGGTTTTCGCGCAGACTCTAATAAACTGAAGATTTCAGAGCCAAATGACACTGAAGTCTaGAGACCAATTTCTTCTGGA +
Preference number: 4 (lower is better)
Translates to: MNSVGFRADSNKLKISEPNDTEV*RPISSG
Trigger: TCCAGAAGAAATTGGTCTTCAGACTTCAGTGTCATT...TGGCTCTGAAATCTTCAGTTTATTAGAGTCTGCGCGAAAACCAACAGAATTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637651.1
CDS-3UTR GCA 90 bp AAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGTATCACTTTGCACTaGATGCTTTTAGGCTTTTTG +
Preference number: 4 (lower is better)
Translates to: KFSTDRYKSVGLEEGTPYSITLH*MLLGFL
Trigger: CAAAAAGCCTAAAAGCATGCAGTGCAAAGTGATACT...ATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp TTGCTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCACATTAAATGAAAAGTaGCAAGCACCACTTCGAACC +
Preference number: 4 (lower is better)
Translates to: LLYYGKISLPVSLLMVKVTLNEK*QAPLRT
Trigger: GGTTCGAAGTGGTGCTTGGCACTTTTCATTTAATGT...GACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp TTGCTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCACATGGTATAACGTTTaGTGGATGAGCGTTCAAAGT +
Preference number: 4 (lower is better)
Translates to: LLYYGKISLPVSLLMVKVTWYNV*WMSVQS
Trigger: ACTTTGAACGCTCATCCAGCAAACGTTATACCATGT...GACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAGCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp ATTGCTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTTTCTTGTCTCTGAAATaGCCCCTTTCACAGTTTTGG +
Preference number: 4 (lower is better)
Translates to: IALLWEDLSASVFINGQGFLSLK*PLSQFW
Trigger: CCAAAACTGTGAAAGGGGGCATTTCAGAGACAAGAA...ACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAGCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp GAGGTGGAGACTTATGAGCTAGATCTATATCCACAATTTACAAATGAGGTACAATTCTTGTCTCTGAAATaGCCCCTTTCACAGTTTTGG +
Preference number: 4 (lower is better)
Translates to: EVETYELDLYPQFTNEVQFLSLK*PLSQFW
Trigger: CCAAAACTGTGAAAGGGGGCATTTCAGAGACAAGAA...TTGTACCTCATTTGTAAATTGTGGATATAGATCTAGCTCATAAGTCTCCACCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579951.2
CDS-3UTR GCA 90 bp TCTTCTGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGATGCTGAATCAGATTaGTTTATTATGGGAAGATCT +
Preference number: 4 (lower is better)
Translates to: SSGLKFSTDRYKSVGLEEDAESD*FIMGRS
Trigger: AGATCTTCCCATAATAAAGCAATCTGATTCAGCATC...CTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCAGAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp TCTTCTGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGTTTATCGTTGCTTCATaGATTATCGGTTTAGTGATG +
Preference number: 4 (lower is better)
Translates to: SSGLKFSTDRYKSVGLEEFIVAS*IIGLVM
Trigger: CATCACTAAACCGATAATGCATGAAGCAACGATAAA...CTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCAGAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp ATTGCTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCCTCAAAAACTGTCATaGTGGAATTGCAAACTGTGG +
Preference number: 4 (lower is better)
Translates to: IALLWEDLSASVFINGQGPQKLS*WNCKLW
Trigger: CCACAGTTTGCAATTCCAGCATGACAGTTTTTGAGG...ACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAGCAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637651.1
CDS-3UTR CCA 90 bp AGCAAGATTGGAAGCATTACATATTTCCAGAGGGTCAGAGAGTCATTACTGTTTTCCAACCAATTCTTCTaGTTTTCAGCATCTCGATAC +
Preference number: 4 (lower is better)
Translates to: SKIGSITYFQRVRESLLFSNQFF*FSASRY
Trigger: GTATCGAGATGCTGAAAACCAGAAGAATTGGTTGGA...AAACAGTAATGACTCTCTGACCCTCTGGAAATATGTAATGCTTCCAATCTTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000544123.5
ENST00000637651.1
CDS-3UTR CCA 90 bp CAATTCTTCTGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGATTGGGCAGGGTCTGGTaGATAAAATTTCACATTAAA +
Preference number: 4 (lower is better)
Translates to: QFFWTEIFHGQIQVSWVRLGRVW*IKFHIK
Trigger: TTTAATGTGAAATTTTATCCACCAGACCCTGCCCAA...TCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCAGAAGAATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp CAAAGCAAGATTGGAAGCATTACATATTTCCAGAGGGTCAGAGAGTCATTACTGTTGGGCAGGGTCTGGTaGATAAAATTTCACATTAAA +
Preference number: 4 (lower is better)
Translates to: QSKIGSITYFQRVRESLLLGRVW*IKFHIK
Trigger: TTTAATGTGAAATTTTATCCACCAGACCCTGCCCAA...CAGTAATGACTCTCTGACCCTCTGGAAATATGTAATGCTTCCAATCTTGCTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000544123.5
ENST00000637651.1
CDS-3UTR CCA 90 bp GTTGCTTCATGCATTATCGGTTTAGTGATGCTGAATCAGATTGCTTTATTATGGTTCTTTAGTGTGGTTTaGTGCAAAGCGGAACTCACT +
Preference number: 4 (lower is better)
Translates to: VASCIIGLVMLNQIALLWFFSVV*CKAELT
Trigger: AGTGAGTTCCGCTTTGCACCAAACCACACTAAAGAA...CCATAATAAAGCAATCTGATTCAGCATCACTAAACCGATAATGCATGAAGCAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp GTGTTACATGAGACCACGGTTTATATTGTTGGTTATGAACGTGCAGGTATAGCTAAATCTTTAGAACCTTaGGCCAGGCAAATCTGTTTA +
Preference number: 4 (lower is better)
Translates to: VLHETTVYIVGYERAGIAKSLEP*ARQICL
Trigger: TAAACAGATTTGCCTGGCCCAAGGTTCTAAAGATTT...AGCTATACCTGCACGTTCATAACCAACAATATAAACCGTGGTCTCATGTAACAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp ATTGCTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTAGGTTAGGAATTTCTTaGGAGGTGCTTCTGGTAACA +
Preference number: 4 (lower is better)
Translates to: IALLWEDLSASVFINGQGRLGIS*EVLLVT
Trigger: TGTTACCAGAAGCACCTCCCAAGAAATTCCTAACCT...ACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAGCAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp TCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATTCTTCTGGACTGAAATTTTCAGGTTAGGAATTTCTTaGGAGGTGCTTCTGGTAACA +
Preference number: 4 (lower is better)
Translates to: SASVFINGQGQFFWTEIFRLGIS*EVLLVT
Trigger: TGTTACCAGAAGCACCTCCCAAGAAATTCCTAACCT...GAAAATTTCAGTCCAGAAGAATTGACCTTGACCATTAATAAAGACACTGGCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp TTCAGTGCATTTGCCATTTTTATTTCGCTATGCAGAAACATACATTCACCATGGCTGGCACTTCCTTCGTaGAAATTTCTAGCTTTACTC +
Preference number: 4 (lower is better)
Translates to: FSAFAIFISLCRNIHSPWLALPS*KFLALL
Trigger: GAGTAAAGCTAGAAATTTCCACGAAGGAAGTGCCAG...CCATGGTGAATGTATGTTTCTGCATAGCGAAATAAAAATGGCAAATGCACTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000544123.5
CDS-3UTR CCA 90 bp CGTTGCTTCATGCATTATCGGTTTAGTGATGCTGAATCAGATTGCTTTATTATGCTGGCACTTCCTTCGTaGAAATTTCTAGCTTTACTC +
Preference number: 4 (lower is better)
Translates to: RCFMHYRFSDAESDCFIMLALPS*KFLALL
Trigger: GAGTAAAGCTAGAAATTTCCACGAAGGAAGTGCCAG...CATAATAAAGCAATCTGATTCAGCATCACTAAACCGATAATGCATGAAGCAACG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp TCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATTCTTCTGGACTGAAATTTTCCTGGCACTTCCTTCGTaGAAATTTCTAGCTTTACTC +
Preference number: 4 (lower is better)
Translates to: SASVFINGQGQFFWTEIFLALPS*KFLALL
Trigger: GAGTAAAGCTAGAAATTTCCACGAAGGAAGTGCCAG...GAAAATTTCAGTCCAGAAGAATTGACCTTGACCATTAATAAAGACACTGGCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp TCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATTCTTCTGGACTGAAATTTTCGCTAAGTTATTCCTCTaGTCAATCCTCTCCATCTTC +
Preference number: 4 (lower is better)
Translates to: SASVFINGQGQFFWTEIFAKLFL*SILSIF
Trigger: GAAGATGGAGAGGATTGACCAGAGGAATAACTTAGC...GAAAATTTCAGTCCAGAAGAATTGACCTTGACCATTAATAAAGACACTGGCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp CGTTGCTTCATGCATTATCGGTTTAGTGATGCTGAATCAGATTGCTTTATTATGGCTAAGTTATTCCTCTaGTCAATCCTCTCCATCTTC +
Preference number: 4 (lower is better)
Translates to: RCFMHYRFSDAESDCFIMAKLFL*SILSIF
Trigger: GAAGATGGAGAGGATTGACCAGAGGAATAACTTAGC...CATAATAAAGCAATCTGATTCAGCATCACTAAACCGATAATGCATGAAGCAACG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp GAGGTGGAGACTTATGAGCTAGATCTATATCCACAATTTACAAATGAGGTACAACTTCGGAATACATGCTaGACTAGAGGAATAGCATTG +
Preference number: 4 (lower is better)
Translates to: EVETYELDLYPQFTNEVQLRNTC*TRGIAL
Trigger: CAATGCTATTCCTCTAGTCCAGCATGTATTCCGAAG...TTGTACCTCATTTGTAAATTGTGGATATAGATCTAGCTCATAAGTCTCCACCTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579951.2
3UTR CAA 72 bp AGAAGTATCACTTTGCACTGCATGCTTTTAGGCTTTTaGACAATCTTTAATGGAGACCGAGAGAGTTTACTG +
Preference number: 4 (lower is better)
Translates to: RSITLHCMLLGF*TIFNGDRESLL
Trigger: CAGTAAACTCTCTCGGTCTCCATTAAAGATTGTCAAAAAGCCTAAAAGCATGCAGTGCAAAGTGATACTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580866.2
CDS-3UTR TCA 90 bp CTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATTCGTCTTCTAATTGCTaGTATTCGAGCTGTTTTGCA +
Preference number: 4 (lower is better)
Translates to: LYYGKISLPVSLLMVKVNSSSNC*YSSCFA
Trigger: TGCAAAACAGCTCGAATATCAGCAATTAGAAGACGA...ATTGACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR TCA 90 bp CGTTGCTTCATGCATTATCGGTTTAGTGATGCTGAATCAGATTGCTTTATTATGTCGTCTTCTAATTGCTaGTATTCGAGCTGTTTTGCA +
Preference number: 4 (lower is better)
Translates to: RCFMHYRFSDAESDCFIMSSSNC*YSSCFA
Trigger: TGCAAAACAGCTCGAATATCAGCAATTAGAAGACGA...CATAATAAAGCAATCTGATTCAGCATCACTAAACCGATAATGCATGAAGCAACG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR TCA 90 bp TTCAGTGCATTTGCCATTTTTATTTCGCTATGCAGAAACATACATTCACCATGGTCGTCTTCTAATTGCTaGTATTCGAGCTGTTTTGCA +
Preference number: 4 (lower is better)
Translates to: FSAFAIFISLCRNIHSPWSSSNC*YSSCFA
Trigger: TGCAAAACAGCTCGAATATCAGCAATTAGAAGACGA...CCATGGTGAATGTATGTTTCTGCATAGCGAAATAAAAATGGCAAATGCACTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000544123.5
CDS-3UTR TCA 90 bp CGTTGCTTCATGCATTATCGGTTTAGTGATGCTGAATCAGATTGCTTTATTATGATCACAGGTATATTCTaGTCCATCGAGAAGTATCAC +
Preference number: 4 (lower is better)
Translates to: RCFMHYRFSDAESDCFIMITGIF*SIEKYH
Trigger: GTGATACTTCTCGATGGATCAGAATATACCTGTGAT...CATAATAAAGCAATCTGATTCAGCATCACTAAACCGATAATGCATGAAGCAACG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR TCA 90 bp TTGCTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCGTTGAGGACTCAAAATaGGGTTTTTGTTCCAAAGTT +
Preference number: 4 (lower is better)
Translates to: LLYYGKISLPVSLLMVKVVEDSK*GFCSKV
Trigger: AACTTTGGAACAAAAACCTCATTTTGAGTCCTCAAC...GACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAGCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR TCA 90 bp CTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATGTGATGATTCATATGTaGTGGTTTTGGTTTCGGTGT +
Preference number: 4 (lower is better)
Translates to: LYYGKISLPVSLLMVKVNVMIHM*WFWFRC
Trigger: ACACCGAAACCAAAACCATCACATATGAATCATCAC...ATTGACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR TCA 90 bp GAGGTGGAGACTTATGAGCTAGATCTATATCCACAATTTACAAATGAGGTACAAGTGATGATTCATATGTaGTGGTTTTGGTTTCGGTGT +
Preference number: 4 (lower is better)
Translates to: EVETYELDLYPQFTNEVQVMIHM*WFWFRC
Trigger: ACACCGAAACCAAAACCATCACATATGAATCATCAC...TTGTACCTCATTTGTAAATTGTGGATATAGATCTAGCTCATAAGTCTCCACCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579951.2
CDS-3UTR TCA 90 bp TCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATTCTTCTGGACTGAAATTTTCTCAATTCTTCTGGACTaGAATTTTCCACGGACAGAT +
Preference number: 4 (lower is better)
Translates to: SASVFINGQGQFFWTEIFSILLD*NFPRTD
Trigger: ATCTGTCCGTGGAAAATTTCAGTCCAGAAGAATTGA...GAAAATTTCAGTCCAGAAGAATTGACCTTGACCATTAATAAAGACACTGGCAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR TCA 90 bp ATTGCTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTTCAATTCTTCTGGACTaGAATTTTCCACGGACAGAT +
Preference number: 4 (lower is better)
Translates to: IALLWEDLSASVFINGQGSILLD*NFPRTD
Trigger: ATCTGTCCGTGGAAAATTTCAGTCCAGAAGAATTGA...ACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAGCAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR TCA 90 bp AGTCACAATCTTTTTCAAATCACCATCAACTACCTCAGTTGGTATTCTGTCTACTCAATTCTTCTGGACTaGAATTTTCCACGGACAGAT +
Preference number: 4 (lower is better)
Translates to: SHNLFQITINYLSWYSVYSILLD*NFPRTD
Trigger: ATCTGTCCGTGGAAAATTTCAGTCCAGAAGAATTGA...GTAGACAGAATACCAACTGAGGTAGTTGATGGTGATTTGAAAAAGATTGTGACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637651.1
CDS-3UTR TCA 90 bp TCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATTCTTCTGGACTGAAATTTTCCAATGCAGTTCAACTTaGGAAAGGAGTCTCATTGAT +
Preference number: 4 (lower is better)
Translates to: SASVFINGQGQFFWTEIFQCSST*ERSLID
Trigger: ATCAATGAGACTCCTTTCTCAAGTTGAACTGCATTG...GAAAATTTCAGTCCAGAAGAATTGACCTTGACCATTAATAAAGACACTGGCAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544123.5
CDS-3UTR TCA 90 bp CCTATGAATTCTGTTGGTTTTCGCGCAGACTCTAATAAACTGAAGATTTCAGAGAGGCATAATACAATATaGCCAGGTAGGTTAATAGCT +
Preference number: 4 (lower is better)
Translates to: PMNSVGFRADSNKLKISERHNTI*PGRLIA
Trigger: AGCTATTAACCTACCTGGTCATATTGTATTATGCCT...CTCTGAAATCTTCAGTTTATTAGAGTCTGCGCGAAAACCAACAGAATTCATAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637651.1
CDS-3UTR GCA 90 bp CTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATACATTAAATGAAAAGTaGCAAGCACCACTTCGAACC +
Preference number: 4 (lower is better)
Translates to: LYYGKISLPVSLLMVKVNTLNEK*QAPLRT
Trigger: GGTTCGAAGTGGTGCTTGGCACTTTTCATTTAATGT...ATTGACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp CGTTGCTTCATGCATTATCGGTTTAGTGATGCTGAATCAGATTGCTTTATTATGACATTAAATGAAAAGTaGCAAGCACCACTTCGAACC +
Preference number: 4 (lower is better)
Translates to: RCFMHYRFSDAESDCFIMTLNEK*QAPLRT
Trigger: GGTTCGAAGTGGTGCTTGGCACTTTTCATTTAATGT...CATAATAAAGCAATCTGATTCAGCATCACTAAACCGATAATGCATGAAGCAACG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp TCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATTCTTCTGGACTGAAATTTTCTTTAGTGTGGTTTGGTaGAAAGCGGAACTCACTAAT +
Preference number: 4 (lower is better)
Translates to: SASVFINGQGQFFWTEIFFSVVW*KAELTN
Trigger: ATTAGTGAGTTCCGCTTTGCACCAAACCACACTAAA...GAAAATTTCAGTCCAGAAGAATTGACCTTGACCATTAATAAAGACACTGGCAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp ATTGCTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTTTTAGTGTGGTTTGGTaGAAAGCGGAACTCACTAAT +
Preference number: 4 (lower is better)
Translates to: IALLWEDLSASVFINGQGFSVVW*KAELTN
Trigger: ATTAGTGAGTTCCGCTTTGCACCAAACCACACTAAA...ACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAGCAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp CGTTGCTTCATGCATTATCGGTTTAGTGATGCTGAATCAGATTGCTTTATTATGACATGGTATAACGTTTaGTGGATGAGCGTTCAAAGT +
Preference number: 4 (lower is better)
Translates to: RCFMHYRFSDAESDCFIMTWYNV*WMSVQS
Trigger: ACTTTGAACGCTCATCCAGCAAACGTTATACCATGT...CATAATAAAGCAATCTGATTCAGCATCACTAAACCGATAATGCATGAAGCAACG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp ATTGCTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTACATGGTATAACGTTTaGTGGATGAGCGTTCAAAGT +
Preference number: 4 (lower is better)
Translates to: IALLWEDLSASVFINGQGTWYNV*WMSVQS
Trigger: ACTTTGAACGCTCATCCAGCAAACGTTATACCATGT...ACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAGCAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp GTTGCTTCATGCATTATCGGTTTAGTGATGCTGAATCAGATTGCTTTATTATGGACATGGTATAACGTTTaGTGGATGAGCGTTCAAAGT +
Preference number: 4 (lower is better)
Translates to: VASCIIGLVMLNQIALLWTWYNV*WMSVQS
Trigger: ACTTTGAACGCTCATCCAGCAAACGTTATACCATGT...CCATAATAAAGCAATCTGATTCAGCATCACTAAACCGATAATGCATGAAGCAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp GTGTTACATGAGACCACGGTTTATATTGTTGGTTATGAACGTGCAGGTATAGCTGATGCTGAATCAGATTaGTTTATTATGGGAAGATCT +
Preference number: 4 (lower is better)
Translates to: VLHETTVYIVGYERAGIADAESD*FIMGRS
Trigger: AGATCTTCCCATAATAAAGCAATCTGATTCAGCATC...AGCTATACCTGCACGTTCATAACCAACAATATAAACCGTGGTCTCATGTAACAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp CAATTCTTCTGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGATTTATCGTTGCTTCATaGATTATCGGTTTAGTGATG +
Preference number: 4 (lower is better)
Translates to: QFFWTEIFHGQIQVSWVRFIVAS*IIGLVM
Trigger: CATCACTAAACCGATAATGCATGAAGCAACGATAAA...TCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCAGAAGAATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp CGTTGCTTCATGCATTATCGGTTTAGTGATGCTGAATCAGATTGCTTTATTATGATGACTGCATTCATGTaGAAGCTAAGTTATTCCTGG +
Preference number: 4 (lower is better)
Translates to: RCFMHYRFSDAESDCFIMMTAFM*KLSYSW
Trigger: CCAGGAATAACTTAGCTTGCACATGAATGCAGTCAT...CATAATAAAGCAATCTGATTCAGCATCACTAAACCGATAATGCATGAAGCAACG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544123.5
CDS-3UTR GCA 90 bp GAGGTGGAGACTTATGAGCTAGATCTATATCCACAATTTACAAATGAGGTACAATTTTCTTTGTTTCTCTaGCAGGGTATTTACCGTCTC +
Preference number: 4 (lower is better)
Translates to: EVETYELDLYPQFTNEVQFSLFL*QGIYRL
Trigger: GAGACGGTAAATACCCTGGCAGAGAAACAAAGAAAA...TTGTACCTCATTTGTAAATTGTGGATATAGATCTAGCTCATAAGTCTCCACCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579951.2
CDS-3UTR CCA 90 bp TTCAGTGCATTTGCCATTTTTATTTCGCTATGCAGAAACATACATTCACCATGGTCCAACCAATTCTTCTaGTTTTCAGCATCTCGATAC +
Preference number: 4 (lower is better)
Translates to: FSAFAIFISLCRNIHSPWSNQFF*FSASRY
Trigger: GTATCGAGATGCTGAAAACCAGAAGAATTGGTTGGA...CCATGGTGAATGTATGTTTCTGCATAGCGAAATAAAAATGGCAAATGCACTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000544123.5
CDS-3UTR CCA 90 bp GTTGCTTCATGCATTATCGGTTTAGTGATGCTGAATCAGATTGCTTTATTATGGTCCAACCAATTCTTCTaGTTTTCAGCATCTCGATAC +
Preference number: 4 (lower is better)
Translates to: VASCIIGLVMLNQIALLWSNQFF*FSASRY
Trigger: GTATCGAGATGCTGAAAACCAGAAGAATTGGTTGGA...CCATAATAAAGCAATCTGATTCAGCATCACTAAACCGATAATGCATGAAGCAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp TCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATTCTTCTGGACTGAAATTTTCTCCAACCAATTCTTCTaGTTTTCAGCATCTCGATAC +
Preference number: 4 (lower is better)
Translates to: SASVFINGQGQFFWTEIFSNQFF*FSASRY
Trigger: GTATCGAGATGCTGAAAACCAGAAGAATTGGTTGGA...GAAAATTTCAGTCCAGAAGAATTGACCTTGACCATTAATAAAGACACTGGCAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp ATTGCTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTTGGTATAACGTTTGCTaGATGAGCGTTCAAAGTAAG +
Preference number: 4 (lower is better)
Translates to: IALLWEDLSASVFINGQGWYNVC*MSVQSK
Trigger: CTTACTTTGAACGCTCATCCAGCAAACGTTATACCA...ACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAGCAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp TCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATTCTTCTGGACTGAAATTTTCATCTCTGTCTCTTTATaGACCACTACTTTGGTCACT +
Preference number: 4 (lower is better)
Translates to: SASVFINGQGQFFWTEIFISVSL*TTTLVT
Trigger: AGTGACCAAAGTAGTGGTCCATAAAGAGACAGAGAT...GAAAATTTCAGTCCAGAAGAATTGACCTTGACCATTAATAAAGACACTGGCAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp AGTCACAATCTTTTTCAAATCACCATCAACTACCTCAGTTGGTATTCTGTCTACATCTCTGTCTCTTTATaGACCACTACTTTGGTCACT +
Preference number: 4 (lower is better)
Translates to: SHNLFQITINYLSWYSVYISVSL*TTTLVT
Trigger: AGTGACCAAAGTAGTGGTCCATAAAGAGACAGAGAT...GTAGACAGAATACCAACTGAGGTAGTTGATGGTGATTTGAAAAAGATTGTGACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637651.1
CDS-3UTR CCA 90 bp TTCAGTGCATTTGCCATTTTTATTTCGCTATGCAGAAACATACATTCACCATGGCAAGGTCAATTCTTCTaGACTGAAATTTTCCACGGA +
Preference number: 4 (lower is better)
Translates to: FSAFAIFISLCRNIHSPWQGQFF*TEIFHG
Trigger: TCCGTGGAAAATTTCAGTCCAGAAGAATTGACCTTG...CCATGGTGAATGTATGTTTCTGCATAGCGAAATAAAAATGGCAAATGCACTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000544123.5
CDS-3UTR CCA 90 bp GTTGCTTCATGCATTATCGGTTTAGTGATGCTGAATCAGATTGCTTTATTATGGCAGATTGCTTTATTATaGGAAGATCTCTCTGCCAGT +
Preference number: 4 (lower is better)
Translates to: VASCIIGLVMLNQIALLWQIALL*EDLSAS
Trigger: ACTGGCAGAGAGATCTTCCCATAATAAAGCAATCTG...CCATAATAAAGCAATCTGATTCAGCATCACTAAACCGATAATGCATGAAGCAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp ATTGGAAAGTTAATTCGGAATTTTCTTCGGAATACATGCTGGACTAGAGGAATAGAAACAAAAAGGAGGTaGAACATGCATGATCAGTGG +
Preference number: 4 (lower is better)
Translates to: IGKLIRNFLRNTCWTRGIETKRR*NMHDQW
Trigger: CCACTGATCATGCATGTTCCACCTCCTTTTTGTTTC...TATTCCTCTAGTCCAGCATGTATTCCGAAGAAAATTCCGAATTAACTTTCCAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579951.2
CDS-3UTR CCA 90 bp AAAGCAAGATTGGAAGCATTACATATTTCCAGAGGGTCAGAGAGTCATTACTGTTTTCTTTATCACACTTaGCTAGTGGGGAAACCAATA +
Preference number: 4 (lower is better)
Translates to: KARLEALHISRGSESHYCFLYHT*LVGKPI
Trigger: TATTGGTTTCCCCACTAGCCAAGTGTGATAAAGAAA...ACAGTAATGACTCTCTGACCCTCTGGAAATATGTAATGCTTCCAATCTTGCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637651.1
3UTR CAA 72 bp TCACAGGTATATTCTGATCCATCGAGAAGTATCACTTaGCACTGCATGCTTTTAGGCTTTTTGACAATCTTT +
Preference number: 4 (lower is better)
Translates to: SQVYSDPSRSIT*HCMLLGFLTIF
Trigger: AAAGATTGTCAAAAAGCCTAAAAGCATGCAGTGCAAAGTGATACTTCTCGATGGATCAGAATATACCTGTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000580866.2
CDS-3UTR TCA 90 bp CTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATCTGCTAGATGATTTCTaGGAAAGTTTATCGTCTTCT +
Preference number: 4 (lower is better)
Translates to: LYYGKISLPVSLLMVKVNLLDDF*ESLSSS
Trigger: AGAAGACGATAAACTTTCTCAGAAATCATCTAGCAG...ATTGACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR TCA 90 bp CGTTGCTTCATGCATTATCGGTTTAGTGATGCTGAATCAGATTGCTTTATTATGCTGCTAGATGATTTCTaGGAAAGTTTATCGTCTTCT +
Preference number: 4 (lower is better)
Translates to: RCFMHYRFSDAESDCFIMLLDDF*ESLSSS
Trigger: AGAAGACGATAAACTTTCTCAGAAATCATCTAGCAG...CATAATAAAGCAATCTGATTCAGCATCACTAAACCGATAATGCATGAAGCAACG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR TCA 90 bp AGAAGTATCACTTTGCACTGCATGCTTTTAGGCTTTTTGACAATCTTTAATGGAATCACAGGTATATTCTaGTCCATCGAGAAGTATCAC +
Preference number: 4 (lower is better)
Translates to: RSITLHCMLLGFLTIFNGITGIF*SIEKYH
Trigger: GTGATACTTCTCGATGGATCAGAATATACCTGTGAT...TCCATTAAAGATTGTCAAAAAGCCTAAAAGCATGCAGTGCAAAGTGATACTTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000580866.2
CDS-3UTR TCA 90 bp GTTGCTTCATGCATTATCGGTTTAGTGATGCTGAATCAGATTGCTTTATTATGGCTGGTAACAGTAGTCTaGAAAATGTATGATGCTCAA +
Preference number: 4 (lower is better)
Translates to: VASCIIGLVMLNQIALLWLVTVV*KMYDAQ
Trigger: TTGAGCATCATACATTTTTCAGACTACTGTTACCAG...CCATAATAAAGCAATCTGATTCAGCATCACTAAACCGATAATGCATGAAGCAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR TCA 90 bp CGTTGCTTCATGCATTATCGGTTTAGTGATGCTGAATCAGATTGCTTTATTATGGTTGAGGACTCAAAATaGGGTTTTTGTTCCAAAGTT +
Preference number: 4 (lower is better)
Translates to: RCFMHYRFSDAESDCFIMVEDSK*GFCSKV
Trigger: AACTTTGGAACAAAAACCTCATTTTGAGTCCTCAAC...CATAATAAAGCAATCTGATTCAGCATCACTAAACCGATAATGCATGAAGCAACG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR TCA 90 bp TCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATTCTTCTGGACTGAAATTTTCAGAAAGGAGTCTCATTaGTTGATCAGGCAAAGTTTT +
Preference number: 4 (lower is better)
Translates to: SASVFINGQGQFFWTEIFRKESH*LIRQSF
Trigger: AAAACTTTGCCTGATCAATCAATGAGACTCCTTTCT...GAAAATTTCAGTCCAGAAGAATTGACCTTGACCATTAATAAAGACACTGGCAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544123.5
CDS-3UTR GCA 90 bp CTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATAGTATCACTTTGCACTaGATGCTTTTAGGCTTTTTG +
Preference number: 4 (lower is better)
Translates to: LYYGKISLPVSLLMVKVNSITLH*MLLGFL
Trigger: CAAAAAGCCTAAAAGCATGCAGTGCAAAGTGATACT...ATTGACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp TTCAGTGCATTTGCCATTTTTATTTCGCTATGCAGAAACATACATTCACCATGGATGACTGCATTCATGTaGAAGCTAAGTTATTCCTCT +
Preference number: 4 (lower is better)
Translates to: FSAFAIFISLCRNIHSPWMTAFM*KLSYSS
Trigger: AGAGGAATAACTTAGCTTGCACATGAATGCAGTCAT...CCATGGTGAATGTATGTTTCTGCATAGCGAAATAAAAATGGCAAATGCACTGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341928.7
ENST00000342933.7
CDS-3UTR GCA 90 bp GTTGCTTCATGCATTATCGGTTTAGTGATGCTGAATCAGATTGCTTTATTATGGATGACTGCATTCATGTaGAAGCTAAGTTATTCCTCT +
Preference number: 4 (lower is better)
Translates to: VASCIIGLVMLNQIALLWMTAFM*KLSYSS
Trigger: AGAGGAATAACTTAGCTTGCACATGAATGCAGTCAT...CCATAATAAAGCAATCTGATTCAGCATCACTAAACCGATAATGCATGAAGCAAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp CCTATGAATTCTGTTGGTTTTCGCGCAGACTCTAATAAACTGAAGATTTCAGAGTTTATCGTTGCTTCATaGATTATCGGTTTAGTGATG +
Preference number: 4 (lower is better)
Translates to: PMNSVGFRADSNKLKISEFIVAS*IIGLVM
Trigger: CATCACTAAACCGATAATGCATGAAGCAACGATAAA...CTCTGAAATCTTCAGTTTATTAGAGTCTGCGCGAAAACCAACAGAATTCATAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637651.1
CDS-3UTR GCA 90 bp TTAATTCGGAATTTTCTTCGGAATACATGCTGGACTAGAGGAATAGCATTGAAATTTCTTCGGAATACATaGTGGACTAGAGGAATAGCA +
Preference number: 4 (lower is better)
Translates to: LIRNFLRNTCWTRGIALKFLRNT*WTRGIA
Trigger: TGCTATTCCTCTAGTCCAGCATGTATTCCGAAGAAA...TTTCAATGCTATTCCTCTAGTCCAGCATGTATTCCGAAGAAAATTCCGAATTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579951.2
CDS-3UTR CCA 90 bp CGTTGCTTCATGCATTATCGGTTTAGTGATGCTGAATCAGATTGCTTTATTATGTTGGGCAGGGTCTGGTaGATAAAATTTCACATTAAA +
Preference number: 4 (lower is better)
Translates to: RCFMHYRFSDAESDCFIMLGRVW*IKFHIK
Trigger: TTTAATGTGAAATTTTATCCACCAGACCCTGCCCAA...CATAATAAAGCAATCTGATTCAGCATCACTAAACCGATAATGCATGAAGCAACG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp CTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATTTGGGCAGGGTCTGGTaGATAAAATTTCACATTAAA +
Preference number: 4 (lower is better)
Translates to: LYYGKISLPVSLLMVKVNLGRVW*IKFHIK
Trigger: TTTAATGTGAAATTTTATCCACCAGACCCTGCCCAA...ATTGACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp TTCAGTGCATTTGCCATTTTTATTTCGCTATGCAGAAACATACATTCACCATGGAAATCTTTAGAACCTTaGGCCAGGCAAATCTGTTTA +
Preference number: 4 (lower is better)
Translates to: FSAFAIFISLCRNIHSPWKSLEP*ARQICL
Trigger: TAAACAGATTTGCCTGGCCCAAGGTTCTAAAGATTT...CCATGGTGAATGTATGTTTCTGCATAGCGAAATAAAAATGGCAAATGCACTGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000544123.5
CDS-3UTR CCA 90 bp TCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATTCTTCTGGACTGAAATTTTCAAATCTTTAGAACCTTaGGCCAGGCAAATCTGTTTA +
Preference number: 4 (lower is better)
Translates to: SASVFINGQGQFFWTEIFKSLEP*ARQICL
Trigger: TAAACAGATTTGCCTGGCCCAAGGTTCTAAAGATTT...GAAAATTTCAGTCCAGAAGAATTGACCTTGACCATTAATAAAGACACTGGCAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp TCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATTCTTCTGGACTGAAATTTTCCACTATAACGAAACTTaGAACCCAAGGTTAGGAATT +
Preference number: 4 (lower is better)
Translates to: SASVFINGQGQFFWTEIFHYNET*NPRLGI
Trigger: AATTCCTAACCTTGGGTTCCAAGTTTCGTTATAGTG...GAAAATTTCAGTCCAGAAGAATTGACCTTGACCATTAATAAAGACACTGGCAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp CTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATCACTATAACGAAACTTaGAACCCAAGGTTAGGAATT +
Preference number: 4 (lower is better)
Translates to: LYYGKISLPVSLLMVKVNHYNET*NPRLGI
Trigger: AATTCCTAACCTTGGGTTCCAAGTTTCGTTATAGTG...ATTGACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp GTTGCTTCATGCATTATCGGTTTAGTGATGCTGAATCAGATTGCTTTATTATGGCACTATAACGAAACTTaGAACCCAAGGTTAGGAATT +
Preference number: 4 (lower is better)
Translates to: VASCIIGLVMLNQIALLWHYNET*NPRLGI
Trigger: AATTCCTAACCTTGGGTTCCAAGTTTCGTTATAGTG...CCATAATAAAGCAATCTGATTCAGCATCACTAAACCGATAATGCATGAAGCAAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp CGTTGCTTCATGCATTATCGGTTTAGTGATGCTGAATCAGATTGCTTTATTATGAGGAATCTCAGAGTTTaGAAACGAAAAGAATGGGAA +
Preference number: 4 (lower is better)
Translates to: RCFMHYRFSDAESDCFIMRNLRV*KRKEWE
Trigger: TTCCCATTCTTTTCGTTTCCAAACTCTGAGATTCCT...CATAATAAAGCAATCTGATTCAGCATCACTAAACCGATAATGCATGAAGCAACG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637651.1
CDS-3UTR GCA 90 bp CGTTGCTTCATGCATTATCGGTTTAGTGATGCTGAATCAGATTGCTTTATTATGGATGCTGAATCAGATTaGTTTATTATGGGAAGATCT +
Preference number: 4 (lower is better)
Translates to: RCFMHYRFSDAESDCFIMDAESD*FIMGRS
Trigger: AGATCTTCCCATAATAAAGCAATCTGATTCAGCATC...CATAATAAAGCAATCTGATTCAGCATCACTAAACCGATAATGCATGAAGCAACG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp TCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATTCTTCTGGACTGAAATTTTCGATGCTGAATCAGATTaGTTTATTATGGGAAGATCT +
Preference number: 4 (lower is better)
Translates to: SASVFINGQGQFFWTEIFDAESD*FIMGRS
Trigger: AGATCTTCCCATAATAAAGCAATCTGATTCAGCATC...GAAAATTTCAGTCCAGAAGAATTGACCTTGACCATTAATAAAGACACTGGCAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp ATTGCTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTTTTATCGTTGCTTCATaGATTATCGGTTTAGTGATG +
Preference number: 4 (lower is better)
Translates to: IALLWEDLSASVFINGQGFIVAS*IIGLVM
Trigger: CATCACTAAACCGATAATGCATGAAGCAACGATAAA...ACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAGCAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR GCA 90 bp CGTTGCTTCATGCATTATCGGTTTAGTGATGCTGAATCAGATTGCTTTATTATGTTTATCGTTGCTTCATaGATTATCGGTTTAGTGATG +
Preference number: 4 (lower is better)
Translates to: RCFMHYRFSDAESDCFIMFIVAS*IIGLVM
Trigger: CATCACTAAACCGATAATGCATGAAGCAACGATAAA...CATAATAAAGCAATCTGATTCAGCATCACTAAACCGATAATGCATGAAGCAACG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CCA 90 bp TCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATTCTTCTGGACTGAAATTTTCATCAACTACCTCAGTTaGTATTCTGTCTACAATAAC +
Preference number: 4 (lower is better)
Translates to: SASVFINGQGQFFWTEIFINYLS*YSVYNN
Trigger: GTTATTGTAGACAGAATACCAACTGAGGTAGTTGAT...GAAAATTTCAGTCCAGAAGAATTGACCTTGACCATTAATAAAGACACTGGCAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400111.8
ENST00000637651.1
CDS GCA 90 bp GCCGCGGCGTGGGGACTAGGCTCGGGCGCGCGTCCTCGGCGGCGGTaGGCAGGAGACTCGGGCGTGGGGAGGAAGCCGCAGCCCAGGGCT +
Preference number: 5 (lower is better)
Translates to: AAAWGLGSGARPRRR*AGDSGVGRKPQPRA
Trigger: AGCCCTGGGCTGCGGCTTCCTCCCCACGCCCGAGTCTCCTGCGCACCGCCGCCGAGGACGCGCGCCCGAGCCTAGTCCCCACGCCGCGGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342933.7
ENST00000540638.6
CDS GCA 90 bp GTGCTGTGCGCTGCAGCGGCGGCGAACTGCTCCAGGGCCTGCTGCTaGTCCTCCTTGGGCGGCTCCGGCACGGGCGCCCCCGCGCGCCCC +
Preference number: 5 (lower is better)
Translates to: VLCAAAAANCSRACC*SSLGGSGTGAPARP
Trigger: GGGGCGCGCGGGGGCGCCCGTGCCGGAGCCGCCCAAGGAGGAGCAGCAGCAGGCCCTGGAGCAGTTCGCCGCCGCTGCAGCGCACAGCAC
79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 18 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000578431.1
ENST00000578503.5
ENST00000580179.2
ENST00000580308.5
ENST00000580989.5
ENST00000581833.5
ENST00000582592.1
ENST00000582703.5
ENST00000584015.5
ENST00000584651.5
ENST00000585142.5
ENST00000637651.1
CDS GCA 90 bp GGGGTGCTGTGCGCTGCAGCGGCGGCGAACTGCTCCAGGGCCTGCTaGTGCTCCTCCTTGGGCGGCTCCGGCACGGGCGCCCCCGCGCGC +
Preference number: 5 (lower is better)
Translates to: GVLCAAAAANCSRAC*CSSLGGSGTGAPAR
Trigger: GCGCGCGGGGGCGCCCGTGCCGGAGCCGCCCAAGGAGGAGCAGCAGCAGGCCCTGGAGCAGTTCGCCGCCGCTGCAGCGCACAGCACCCC
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 18 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000578431.1
ENST00000578503.5
ENST00000580179.2
ENST00000580308.5
ENST00000580989.5
ENST00000581833.5
ENST00000582592.1
ENST00000582703.5
ENST00000584015.5
ENST00000584651.5
ENST00000585142.5
ENST00000637651.1
CDS GCA 90 bp ACCGGGGTGCTGTGCGCTGCAGCGGCGGCGAACTGCTCCAGGGCCTaGTGCTGCTCCTCCTTGGGCGGCTCCGGCACGGGCGCCCCCGCG +
Preference number: 5 (lower is better)
Translates to: TGVLCAAAAANCSRA*CCSSLGGSGTGAPA
Trigger: CGCGGGGGCGCCCGTGCCGGAGCCGCCCAAGGAGGAGCAGCAGCAGGCCCTGGAGCAGTTCGCCGCCGCTGCAGCGCACAGCACCCCGGT
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 18 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000578431.1
ENST00000578503.5
ENST00000580179.2
ENST00000580308.5
ENST00000580989.5
ENST00000581833.5
ENST00000582592.1
ENST00000582703.5
ENST00000584015.5
ENST00000584651.5
ENST00000585142.5
ENST00000637651.1
CDS GCA 90 bp CCGAGGCTCCGCGGAGCTGCGGCGGGGGCCCACGCCCAGAGACCGTaGGAGGAAAGCCAACCTCGTCCTGCCTGCCCTCCCAGCCGCGGG +
Preference number: 5 (lower is better)
Translates to: PRLRGAAAGAHAQRP*EESQPRPACPPSRG
Trigger: CCCGCGGCTGGGAGGGCAGGCAGGACGAGGTTGGCTTTCCTCGCACGGTCTCTGGGCGTGGGCCCCCGCCGCAGCTCCGCGGAGCCTCGG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342933.7
ENST00000540638.6
CDS GCA 90 bp GGGCTCCTCCCGCAGCTGCGGTGGCGGCACCTCCAAGTTGCCACCTaGAGCGCGCTTCGGGCGCCTGTGACAGCCCGCGCCGCTCAGCCC +
Preference number: 5 (lower is better)
Translates to: GLLPQLRWRHLQVAT*SALRAPVTARAAQP
Trigger: GGGCTGAGCGGCGCGGGCTGTCACAGGCGCCCGAAGCGCGCTGCAGGTGGCAACTTGGAGGTGCCGCCACCGCAGCTGCGGGAGGAGCCC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578431.1
CDS GCA 90 bp CAGACCCGGGCTCCTCCCGCAGCTGCGGTGGCGGCACCTCCAAGTTaGCACCTGCAGCGCGCTTCGGGCGCCTGTGACAGCCCGCGCCGC +
Preference number: 5 (lower is better)
Translates to: QTRAPPAAAVAAPPS*HLQRASGACDSPRR
Trigger: GCGGCGCGGGCTGTCACAGGCGCCCGAAGCGCGCTGCAGGTGGCAACTTGGAGGTGCCGCCACCGCAGCTGCGGGAGGAGCCCGGGTCTG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578431.1
CDS CCA 90 bp GGGGTCCAGTCTCGGGCTCGGCGGCGGGAAAGAGCTCCTGGAGGCTaGAAGGGGCCGCCAGACCCGGGCTCCTCCCGCAGCTGCGGTGGC +
Preference number: 5 (lower is better)
Translates to: GVQSRARRRERAPGG*KGPPDPGSSRSCGG
Trigger: GCCACCGCAGCTGCGGGAGGAGCCCGGGTCTGGCGGCCCCTTCCAGCCTCCAGGAGCTCTTTCCCGCCGCCGAGCCCGAGACTGGACCCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578431.1
ENST00000637651.1
CDS GCA 90 bp CCTGGAGGCTGGAAGGGGCCGCCAGACCCGGGCTCCTCCCGCAGCTaGGGTGGCGGCACCTCCAAGTTGCCACCTGCAGCGCGCTTCGGG +
Preference number: 5 (lower is better)
Translates to: PGGWKGPPDPGSSRS*GGGTSKLPPAARFG
Trigger: CCCGAAGCGCGCTGCAGGTGGCAACTTGGAGGTGCCGCCACCGCAGCTGCGGGAGGAGCCCGGGTCTGGCGGCCCCTTCCAGCCTCCAGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578431.1
ENST00000637651.1
CDS CCA 90 bp GTTGATTGTTCTGGGATCAGCAGGGAGCCCGGGCGCGCCGCGGCGTaGGGACTAGGCTCGGGCGCGCGTCCTCGGCGGCGGTGCGCAGGA +
Preference number: 5 (lower is better)
Translates to: VDCSGISREPGRAAA*GLGSGARPRRRCAG
Trigger: TCCTGCGCACCGCCGCCGAGGACGCGCGCCCGAGCCTAGTCCCCACGCCGCGGCGCGCCCGGGCTCCCTGCTGATCCCAGAACAATCAAC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000540638.6
CDS CCA 90 bp AGGCTGGAAGGGGCCGCCAGACCCGGGCTCCTCCCGCAGCTGCGGTaGCGGCACCTCCAAGTTGCCACCTGCAGCGCGCTTCGGGCGCCT +
Preference number: 5 (lower is better)
Translates to: RLEGAARPGLLPQLR*RHLQVATCSALRAP
Trigger: AGGCGCCCGAAGCGCGCTGCAGGTGGCAACTTGGAGGTGCCGCCACCGCAGCTGCGGGAGGAGCCCGGGTCTGGCGGCCCCTTCCAGCCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578431.1
ENST00000637651.1
CDS CCA 90 bp ATTCTCCGGGGTCCAGTCTCGGGCTCGGCGGCGGGAAAGAGCTCCTaGAGGCTGGAAGGGGCCGCCAGACCCGGGCTCCTCCCGCAGCTG +
Preference number: 5 (lower is better)
Translates to: ILRGPVSGSAAGKSS*RLEGAARPGLLPQL
Trigger: CAGCTGCGGGAGGAGCCCGGGTCTGGCGGCCCCTTCCAGCCTCCAGGAGCTCTTTCCCGCCGCCGAGCCCGAGACTGGACCCCGGAGAAT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578431.1
ENST00000637651.1
CDS GCA 90 bp GCCCACGCCCAGAGACCGTGCGAGGAAAGCCAACCTCGTCCTGCCTaGCCTCCCAGCCGCGGGGGAGGGGGCCACCGCAGTACTTCAGGA +
Preference number: 5 (lower is better)
Translates to: AHAQRPCEESQPRPA*PPSRGGGGHRSTSG
Trigger: TCCTGAAGTACTGCGGTGGCCCCCTCCCCCGCGGCTGGGAGGGCAGGCAGGACGAGGTTGGCTTTCCTCGCACGGTCTCTGGGCGTGGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342933.7
ENST00000540638.6
CDS CCA 90 bp CAGCCGCGGGGGAGGGGGCCACCGCAGTACTTCAGGACAGTTACATaGGCACAGCCTCCTCCGTCCTGGCGCAGGGTCAGGCTCCGCGGA +
Preference number: 5 (lower is better)
Translates to: QPRGRGPPQYFRTVT*AQPPPSWRRVRLRG
Trigger: TCCGCGGAGCCTGACCCTGCGCCAGGACGGAGGAGGCTGTGCCCATGTAACTGTCCTGAAGTACTGCGGTGGCCCCCTCCCCCGCGGCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342933.7
ENST00000540638.6
CDS GCA 90 bp CTGTTCCTTGTCAGTGACCTCCCTCCGCACCGGGGTGCTGTGCGCTaGAGCGGCGGCGAACTGCTCCAGGGCCTGCTGCTGCTCCTCCTT +
Preference number: 5 (lower is better)
Translates to: LFLVSDLPPHRGAVR*SGGELLQGLLLLLL
Trigger: AAGGAGGAGCAGCAGCAGGCCCTGGAGCAGTTCGCCGCCGCTGCAGCGCACAGCACCCCGGTGCGGAGGGAGGTCACTGACAAGGAACAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000578431.1
ENST00000578503.5
ENST00000580179.2
ENST00000580308.5
ENST00000580989.5
ENST00000581833.5
ENST00000582592.1
ENST00000582703.5
ENST00000584015.5
ENST00000584651.5
ENST00000585142.5
ENST00000637651.1
CDS CCA 90 bp CCGCAGTACTTCAGGACAGTTACATGGGCACAGCCTCCTCCGTCCTaGCGCAGGGTCAGGCTCCGCGGACGACGCCTGGAGACAGCTGCC +
Preference number: 5 (lower is better)
Translates to: PQYFRTVTWAQPPPS*RRVRLRGRRLETAA
Trigger: GGCAGCTGTCTCCAGGCGTCGTCCGCGGAGCCTGACCCTGCGCCAGGACGGAGGAGGCTGTGCCCATGTAACTGTCCTGAAGTACTGCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342933.7
ENST00000540638.6
CDS GCA 90 bp ATCTTCCTCCTGGTCCGACTCAGTGGCAGTGGTCTCCCCGTCGGCTaGGGTGTCCGTGCGCTCACTGTCAGTCTTTCCCTCGTGCCGGAT +
Preference number: 5 (lower is better)
Translates to: IFLLVRLSGSGLPVG*GVRALTVSLSLVPD
Trigger: ATCCGGCACGAGGGAAAGACTGACAGTGAGCGCACGGACACCGCAGCCGACGGGGAGACCACTGCCACTGAGTCGGACCAGGAGGAAGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342933.7
ENST00000400111.8
ENST00000544123.5
ENST00000580316.5
ENST00000637651.1
CDS GCA 90 bp CTTGGCTCTTCAGGGACAAGTGGTTCGATCATGGGGGCATCCTCCTaGCTGGCGGCCAGTCGCACGGGGGAGGTGGAAAGCCTCTTCTCC +
Preference number: 5 (lower is better)
Translates to: LGSSGTSGSIMGASS*LAASRTGEVESLFS
Trigger: GGAGAAGAGGCTTTCCACCTCCCCCGTGCGACTGGCCGCCAGGCAGGAGGATGCCCCCATGATCGAACCACTTGTCCCTGAAGAGCCAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000579271.5
CDS GCA 90 bp CTGACCTCTTCAGGGACAAGTGGTTCGATCATGGGGGCATCCTCCTaGCTGGCGGCCAGTCGCACGGGGGAGGTGGAAAGCCTCTTCTCC +
Preference number: 5 (lower is better)
Translates to: LTSSGTSGSIMGASS*LAASRTGEVESLFS
Trigger: GGAGAAGAGGCTTTCCACCTCCCCCGTGCGACTGGCCGCCAGGCAGGAGGATGCCCCCATGATCGAACCACTTGTCCCTGAAGAGGTCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000580647.5
CDS CCA 90 bp ATCCTGGAGCAGCTCAGCAAACACTGCGTCATTAGTTTTCTGGCCTaGGCTCACCTCCCTCCGCACCGGGGTGCTGTGCGCTGCAGCGGC +
Preference number: 5 (lower is better)
Translates to: ILEQLSKHCVISFLA*AHLPPHRGAVRCSG
Trigger: GCCGCTGCAGCGCACAGCACCCCGGTGCGGAGGGAGGTGAGCCCAGGCCAGAAAACTAATGACGCAGTGTTTGCTGAGCTGCTCCAGGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580866.2
CDS TCA 90 bp CAAGCCCAGGTGACTTTCCCTCGTGCCGGATGGCCGAGATGGGCGTaGCTTCTTCCCCCTTCCTCCGTTTGTCCTCTTCCTCGTCCCGCT +
Preference number: 5 (lower is better)
Translates to: QAQVTFPRAGWPRWA*LLPPSSVCPLPRPA
Trigger: AGCGGGACGAGGAAGAGGACAAACGGAGGAAGGGGGAAGAAGTCACGCCCATCTCGGCCATCCGGCACGAGGGAAAGTCACCTGGGCTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341928.7
CDS GCA 90 bp TTGGTCTCTTCAGGGACAAGTGGTTCGATCATGGGGGCATCCTCCTaGCTGGCGGCCAGTCGCACGGGGGAGGTGGAAAGCCTCTTCTCC +
Preference number: 5 (lower is better)
Translates to: LVSSGTSGSIMGASS*LAASRTGEVESLFS
Trigger: GGAGAAGAGGCTTTCCACCTCCCCCGTGCGACTGGCCGCCAGGCAGGAGGATGCCCCCATGATCGAACCACTTGTCCCTGAAGAGACCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000400111.8
ENST00000578196.5
ENST00000581387.5
ENST00000582729.5
ENST00000637651.1
CDS CCA 90 bp AGCCTCCTCCGTCCTGGCGCAGGGTCAGGCTCCGCGGACGACGCCTaGAGACAGCTGCCAATGCCAATAGCTTTAGCCCTTTATTCCCAC +
Preference number: 5 (lower is better)
Translates to: SLLRPGAGSGSADDA*RQLPMPIALALYSH
Trigger: GTGGGAATAAAGGGCTAAAGCTATTGGCATTGGCAGCTGTCTCCAGGCGTCGTCCGCGGAGCCTGACCCTGCGCCAGGACGGAGGAGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342933.7
CDS CCA 90 bp GCTCTTCAGGGACAAGTGGTTCGATCATGGGGGCATCCTCCTGCCTaGCGGCCAGTCGCACGGGGGAGGTGGAAAGCCTCTTCTCCCATT +
Preference number: 5 (lower is better)
Translates to: ALQGQVVRSWGHPPA*RPVARGRWKASSPI
Trigger: AATGGGAGAAGAGGCTTTCCACCTCCCCCGTGCGACTGGCCGCCAGGCAGGAGGATGCCCCCATGATCGAACCACTTGTCCCTGAAGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000579271.5
CDS CCA 90 bp CCTCTTCAGGGACAAGTGGTTCGATCATGGGGGCATCCTCCTGCCTaGCGGCCAGTCGCACGGGGGAGGTGGAAAGCCTCTTCTCCCATT +
Preference number: 5 (lower is better)
Translates to: PLQGQVVRSWGHPPA*RPVARGRWKASSPI
Trigger: AATGGGAGAAGAGGCTTTCCACCTCCCCCGTGCGACTGGCCGCCAGGCAGGAGGATGCCCCCATGATCGAACCACTTGTCCCTGAAGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000580647.5
CDS CCA 90 bp AGCCGATCCTGGAGCAGCTCAGCAAACACTGCGTCATTAGTTTTCTaGCCTGGGCTCACCTCCCTCCGCACCGGGGTGCTGTGCGCTGCA +
Preference number: 5 (lower is better)
Translates to: SRSWSSSANTASLVF*PGLTSLRTGVLCAA
Trigger: TGCAGCGCACAGCACCCCGGTGCGGAGGGAGGTGAGCCCAGGCCAGAAAACTAATGACGCAGTGTTTGCTGAGCTGCTCCAGGATCGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580866.2
CDS TCA 90 bp GCTCACTGTCAGTCTTTCCCTCGTGCCGGATGGCCGAGATGGGCGTaGCTTCTTCCCCCTTCCTCCGTTTGTCCTCTTCCTCGTCCCGCT +
Preference number: 5 (lower is better)
Translates to: AHCQSFPRAGWPRWA*LLPPSSVCPLPRPA
Trigger: AGCGGGACGAGGAAGAGGACAAACGGAGGAAGGGGGAAGAAGTCACGCCCATCTCGGCCATCCGGCACGAGGGAAAGACTGACAGTGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000542652.6
ENST00000544123.5
ENST00000545076.5
ENST00000578196.5
ENST00000578395.1
ENST00000578524.5
ENST00000579271.5
ENST00000580316.5
ENST00000580647.5
ENST00000581387.5
ENST00000637651.1
CDS GCA 90 bp TTAGTCTCTTCAGGGACAAGTGGTTCGATCATGGGGGCATCCTCCTaGCTGGCGGCCAGTCGCACGGGGGAGGTGGAAAGCCTCTTCTCC +
Preference number: 5 (lower is better)
Translates to: LVSSGTSGSIMGASS*LAASRTGEVESLFS
Trigger: GGAGAAGAGGCTTTCCACCTCCCCCGTGCGACTGGCCGCCAGGCAGGAGGATGCCCCCATGATCGAACCACTTGTCCCTGAAGAGACTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000544123.5
ENST00000578524.5
ENST00000580316.5
CDS CCA 90 bp TCATGGGGGCATCCTCCTGCCTGGCGGCCAGTCGCACGGGGGAGGTaGAAAGCCTCTTCTCCCATTCATTCGTTACGGCAGTGTCTGTTG +
Preference number: 5 (lower is better)
Translates to: SWGHPPAWRPVARGR*KASSPIHSLRQCLL
Trigger: CAACAGACACTGCCGTAACGAATGAATGGGAGAAGAGGCTTTCCACCTCCCCCGTGCGACTGGCCGCCAGGCAGGAGGATGCCCCCATGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 17 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000542652.6
ENST00000544123.5
ENST00000545076.5
ENST00000578196.5
ENST00000578524.5
ENST00000579271.5
ENST00000580316.5
ENST00000580647.5
ENST00000581292.5
ENST00000581387.5
ENST00000582729.5
ENST00000584055.1
ENST00000637651.1
CDS CCA 90 bp TCTCTTCAGGGACAAGTGGTTCGATCATGGGGGCATCCTCCTGCCTaGCGGCCAGTCGCACGGGGGAGGTGGAAAGCCTCTTCTCCCATT +
Preference number: 5 (lower is better)
Translates to: SLQGQVVRSWGHPPA*RPVARGRWKASSPI
Trigger: AATGGGAGAAGAGGCTTTCCACCTCCCCCGTGCGACTGGCCGCCAGGCAGGAGGATGCCCCCATGATCGAACCACTTGTCCCTGAAGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 15 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000542652.6
ENST00000544123.5
ENST00000545076.5
ENST00000578196.5
ENST00000578524.5
ENST00000580316.5
ENST00000581292.5
ENST00000581387.5
ENST00000582729.5
ENST00000584055.1
ENST00000637651.1
CDS CCA 90 bp TACACCTCCTACGGAGCTCTGTGGGAGATGTGGGGGCACAATGGGTaGATGGGGGTGACAAGGGACATGAGTCAGTGCCAAGCCCAGGTG +
Preference number: 5 (lower is better)
Translates to: YTSYGALWEMWGHNG*MGVTRDMSQCQAQV
Trigger: CACCTGGGCTTGGCACTGACTCATGTCCCTTGTCACCCCCATCCACCCATTGTGCCCCCACATCTCCCACAGAGCTCCGTAGGAGGTGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000341928.7
CDS CCA 90 bp TCTCTGTTTCTTCTTTGGTCTCTTCAGGGACAAGTGGTTCGATCATaGGGGCATCCTCCTGCCTGGCGGCCAGTCGCACGGGGGAGGTGG +
Preference number: 5 (lower is better)
Translates to: SLFLLWSLQGQVVRS*GHPPAWRPVARGRW
Trigger: CCACCTCCCCCGTGCGACTGGCCGCCAGGCAGGAGGATGCCCCCATGATCGAACCACTTGTCCCTGAAGAGACCAAAGAAGAAACAGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000400111.8
ENST00000578196.5
ENST00000581387.5
ENST00000582729.5
ENST00000637651.1
CDS-3UTR CAA 90 bp CATCCCCACTCGCGTGCACCACACGCCGCTCCTCCACCAACACGGTCTCCTGCAACTTTCCATAAACGCTaGGCAGCTCGATGGTTTGGC +
Preference number: 5 (lower is better)
Translates to: HPHSRAPHAAPPPTRSPATFHKR*AARWFG
Trigger: GCCAAACCATCGAGCTGCCAAGCGTTTATGGAAAGT...TGCAGGAGACCGTGTTGGTGGAGGAGCGGCGTGTGGTGCACGCGAGTGGGGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637651.1
CDS-3UTR CAA 90 bp CATCCCCACTCGCGTGCACCACACGCCGCTCCTCCACCAACACGGTCTCCTGCACAGCACTATCACATCTaGGGAACAGGGAGCTGGAAA +
Preference number: 5 (lower is better)
Translates to: HPHSRAPHAAPPPTRSPAQHYHI*GTGSWK
Trigger: TTTCCAGCTCCCTGTTCCCAAGATGTGATAGTGCTG...TGCAGGAGACCGTGTTGGTGGAGGAGCGGCGTGTGGTGCACGCGAGTGGGGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637651.1
CDS CCA 90 bp TCCTTACACCTCCTACGGAGCTCTGTGGGAGATGTGGGGGCACAATaGGTGGATGGGGGTGACAAGGGACATGAGTCAGTGCCAAGCCCA +
Preference number: 5 (lower is better)
Translates to: SLHLLRSSVGDVGAQ*VDGGDKGHESVPSP
Trigger: TGGGCTTGGCACTGACTCATGTCCCTTGTCACCCCCATCCACCCATTGTGCCCCCACATCTCCCACAGAGCTCCGTAGGAGGTGTAAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000341928.7
CDS CCA 90 bp GGCGGGCTCTCCAGGCAGGTGCTCAGCTCTGGACGGCTCATAACCTaGCAGTTTGCAGTCATTCTCCTTACACCTCCTACGGAGCTCTGT +
Preference number: 5 (lower is better)
Translates to: GGLSRQVLSSGRLIT*QFAVILLTPPTELC
Trigger: ACAGAGCTCCGTAGGAGGTGTAAGGAGAATGACTGCAAACTGCCAGGTTATGAGCCGTCCAGAGCTGAGCACCTGCCTGGAGAGCCCGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341928.7
CDS CCA 90 bp GGCCATCAGAGTCCAAGGCGGGCTCTCCAGGCAGGTGCTCAGCTCTaGACGGCTCATAACCTGGCAGTTTGCAGTCATTCTCCTTACACC +
Preference number: 5 (lower is better)
Translates to: GHQSPRRALQAGAQL*TAHNLAVCSHSPYT
Trigger: GGTGTAAGGAGAATGACTGCAAACTGCCAGGTTATGAGCCGTCCAGAGCTGAGCACCTGCCTGGAGAGCCCGCCTTGGACTCTGATGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341928.7
CDS CCA 90 bp CTGGCAGTTTGCAGTCATTCTCCTTACACCTCCTACGGAGCTCTGTaGGAGATGTGGGGGCACAATGGGTGGATGGGGGTGACAAGGGAC +
Preference number: 5 (lower is better)
Translates to: LAVCSHSPYTSYGAL*EMWGHNGWMGVTRD
Trigger: GTCCCTTGTCACCCCCATCCACCCATTGTGCCCCCACATCTCCCACAGAGCTCCGTAGGAGGTGTAAGGAGAATGACTGCAAACTGCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000341928.7
CDS-3UTR CAA 90 bp TGCACTCTGCTCCTCTTGTCGCTCACGGGAAGCAGCGGCTGTCTCTTCCTGTTCACTGGCTCTTCTCGTTaGCGCTTGTGTCCTGCCACT +
Preference number: 5 (lower is better)
Translates to: CTLLLLSLTGSSGCLFLFTGSSR*RLCPAT
Trigger: AGTGGCAGGACACAAGCGCAAACGAGAAGAGCCAGT...GAACAGGAAGAGACAGCCGCTGCTTCCCGTGAGCGACAAGAGGAGCAGAGTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637651.1
CDS-3UTR CAA 90 bp CATCCCCACTCGCGTGCACCACACGCCGCTCCTCCACCAACACGGTCTCCTGCAGGTTTTCCTAACGGTTaGCATGACTGCATTCATGTG +
Preference number: 5 (lower is better)
Translates to: HPHSRAPHAAPPPTRSPAGFPNG*HDCIHV
Trigger: CACATGAATGCAGTCATGCAAACCGTTAGGAAAACC...TGCAGGAGACCGTGTTGGTGGAGGAGCGGCGTGTGGTGCACGCGAGTGGGGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637651.1
CDS TCA 90 bp CCTCGTCCCGCTCCTCCTCAGCCTTCTTCTCCGGAGTCACAGTGGTaGTCAAGTTGGTCTGAGAGATGCCTTTTGTTGTGGCGTACTGGC +
Preference number: 5 (lower is better)
Translates to: PRPAPPQPSSPESQW*SSWSERCLLLWRTG
Trigger: GCCAGTACGCCACAACAAAAGGCATCTCTCAGACCAACTTGATCACCACTGTGACTCCGGAGAAGAAGGCTGAGGAGGAGCGGGACGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000542652.6
ENST00000544123.5
ENST00000545076.5
ENST00000578395.1
ENST00000580316.5
ENST00000637651.1
CDS GCA 90 bp CTCCAGGCAGGTGCTCAGCTCTGGACGGCTCATAACCTGGCAGTTTaGAGTCATTCTCCTTACACCTCCTACGGAGCTCTGTGGGAGATG +
Preference number: 5 (lower is better)
Translates to: LQAGAQLWTAHNLAV*SHSPYTSYGALWEM
Trigger: CATCTCCCACAGAGCTCCGTAGGAGGTGTAAGGAGAATGACTGCAAACTGCCAGGTTATGAGCCGTCCAGAGCTGAGCACCTGCCTGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341928.7
CDS CCA 90 bp CTCTGTTTCTTCTTTGGTCTGACTACTGACCTCTTCAGGGACAAGTaGTTCGATCATGGGGGCATCCTCCTGCCTGGCGGCCAGTCGCAC +
Preference number: 5 (lower is better)
Translates to: LCFFFGLTTDLFRDK*FDHGGILLPGGQSH
Trigger: GTGCGACTGGCCGCCAGGCAGGAGGATGCCCCCATGATCGAACCACTTGTCCCTGAAGAGGTCAGTAGTCAGACCAAAGAAGAAACAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000580647.5
CDS-3UTR CAA 90 bp AAGCGTCTGCCTTCCAGGCCAGGGAGGACGGCCACATCCTTCTCCAGCTGTGGAACCAGGTGCTCTTGTTaGGTAAAGCAGAGACGGTTA +
Preference number: 5 (lower is better)
Translates to: KRLPSRPGRTATSFSSCGTRCSC*VKQRRL
Trigger: TAACCGTCTCTGCTTTACCAAACAAGAGCACCTGGT...TCCACAGCTGGAGAAGGATGTGGCCGTCCTCCCTGGCCTGGAAGGCAGACGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637651.1
CDS-3UTR CAA 90 bp CGCTCACGGGAAGCAGCGGCTGTCTCTTCCTGTTCCAGGACAGCTTTAGCGACCAATGGTGCTTTCAAATaGTTCAAACTCTCCCGGCCG +
Preference number: 5 (lower is better)
Translates to: RSREAAAVSSCSRTALATNGAFK*FKLSRP
Trigger: CGGCCGGGAGAGTTTGAACAATTTGAAAGCACCATT...GGTCGCTAAAGCTGTCCTGGAACAGGAAGAGACAGCCGCTGCTTCCCGTGAGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637651.1
CDS-3UTR CAA 90 bp TGGTGCACGGTGGGTTCCGTCTCTATTCCACTGGACTCCGTCTTGGTTTCCATTGAGAGATGCCTTTTGTaGTGGCGTACTGGCCAGTAC +
Preference number: 5 (lower is better)
Translates to: WCTVGSVSIPLDSVLVSIERCLL*WRTGQY
Trigger: GTACTGGCCAGTACGCCACAACAAAAGGCATCTCTC...AATGGAAACCAAGACGGAGTCCAGTGGAATAGAGACGGAACCCACCGTGCACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637651.1
CDS-3UTR CAA 90 bp TGCACTCTGCTCCTCTTGTCGCTCACGGGAAGCAGCGGCTGTCTCTTCCTGTTCTTTCTGAACCCAGCTTaGAGAAGTAGAAGTAACCCC +
Preference number: 5 (lower is better)
Translates to: CTLLLLSLTGSSGCLFLFFLNPA*RSRSNP
Trigger: GGGGTTACTTCTACTTCTCAAAGCTGGGTTCAGAAA...GAACAGGAAGAGACAGCCGCTGCTTCCCGTGAGCGACAAGAGGAGCAGAGTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637651.1
CDS TCA 90 bp TCCTCAGCCTTCTTCTCCGGAGTCACAGTGGTGATCAAGTTGGTCTaGGAGATGCCTTTTGTTGTGGCGTACTGGCCAGTACCAACCTCT +
Preference number: 5 (lower is better)
Translates to: SSAFFSGVTVVIKLV*EMPFVVAYWPVPTS
Trigger: AGAGGTTGGTACTGGCCAGTACGCCACAACAAAAGGCATCTCTCAGACCAACTTGATCACCACTGTGACTCCGGAGAAGAAGGCTGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000542652.6
ENST00000544123.5
ENST00000545076.5
ENST00000578395.1
ENST00000580316.5
ENST00000637651.1
CDS CCA 90 bp CCTGGTCCGGCTTGGATTCCGAGTCTGATCCAGATTCGGTCGTCATaGTTGATTGTTCTGTGCAATAGAAGCTCCAGAACAGCAGGGGTT +
Preference number: 5 (lower is better)
Translates to: PGPAWIPSLIQIRSS*LIVLCNRSSRTAGV
Trigger: AACCCCTGCTGTTCTGGAGCTTCTATTGCACAGAACAATCAACCATGACGACCGAATCTGGATCAGACTCGGAATCCAAGCCGGACCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580179.2
CDS-3UTR CAA 90 bp CATTCGGACAGGCTCTTCCTTCGGGGACCAAAGAGGCCCACTTTTAAGACCTCAATTCCTCTGTGGCTCTaGTGCAGCTCGATCACTTTG +
Preference number: 5 (lower is better)
Translates to: HSDRLFLRGPKRPTFKTSIPLWL*CSSITL
Trigger: CAAAGTGATCGAGCTGCACAAGAGCCACAGAGGAAT...TGAGGTCTTAAAAGTGGGCCTCTTTGGTCCCCGAAGGAAGAGCCTGTCCGAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637651.1
CDS-3UTR CAA 90 bp AGTCACAATCTTTTTCAAATCACCATCAACTACCTCAGTTGGTATTCTGTCTACGGCCCCTCCCGGAGCTaGTTCGCAGCCCGCAGGCAC +
Preference number: 5 (lower is better)
Translates to: SHNLFQITINYLSWYSVYGPSRS*FAARRH
Trigger: GTGCCTGCGGGCTGCGAACAAGCTCCGGGAGGGGCC...GTAGACAGAATACCAACTGAGGTAGTTGATGGTGATTTGAAAAAGATTGTGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637651.1
CDS-3UTR CAA 90 bp TCTTCTGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGCACCGAAGCCTTCCTTaGGGGCCCCTCCCGGAGCTT +
Preference number: 5 (lower is better)
Translates to: SSGLKFSTDRYKSVGLEEHRSLP*GPLPEL
Trigger: AAGCTCCGGGAGGGGCCCCAAAGGAAGGCTTCGGTG...CTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCAGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637651.1
CDS TCA 90 bp CTGCATTCAGCATTCAAAGCCCTCTCAGAAACGCTCATGGCCCCATaGGATCTTGCATGGCAGGTGACTATGCATGACAAGTCTGTGCTC +
Preference number: 5 (lower is better)
Translates to: LHSAFKALSETLMAP*DLAWQVTMHDKSVL
Trigger: GAGCACAGACTTGTCATGCATAGTCACCTGCCATGCAAGATCTCATGGGGCCATGAGCGTTTCTGAGAGGGCTTTGAATGCTGAATGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578618.5
CDS-3UTR CAA 90 bp GCTGATATTCGAGCTGTTTTGCAGCCCTGGCAGCAAACTCCTGTTCCTTGTCAGGATATTCGAGCTGTTTaGCAGCCCTGGCAGCAAACT +
Preference number: 5 (lower is better)
Translates to: ADIRAVLQPWQQTPVPCQDIRAV*QPWQQT
Trigger: AGTTTGCTGCCAGGGCTGCAAAACAGCTCGAATATC...CTGACAAGGAACAGGAGTTTGCTGCCAGGGCTGCAAAACAGCTCGAATATCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580866.2
CDS-3UTR CAA 90 bp GACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCTGGTTTTGCACTCTGCTCCTCTaGTCGCTCACGGGAAGCAGC +
Preference number: 5 (lower is better)
Translates to: DRYKSVGLEEGTPYRLWFCTLLL*SLTGSS
Trigger: GCTGCTTCCCGTGAGCGACAAGAGGAGCAGAGTGCA...AAACCAGAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CAA 90 bp AGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCTGGTTTTCCTGCACTCTGCTCCTCTaGTCGCTCACGGGAAGCAGC +
Preference number: 5 (lower is better)
Translates to: RYKSVGLEEGTPYRLWFSCTLLL*SLTGSS
Trigger: GCTGCTTCCCGTGAGCGACAAGAGGAGCAGAGTGCA...GGAAAACCAGAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CAA 90 bp GAACTCCATATAGGCTCTGGTTTTCCTAACGGTTTGCATGACTGCATTCATGTGTGCACTCTGCTCCTCTaGTCGCTCACGGGAAGCAGC +
Preference number: 5 (lower is better)
Translates to: ELHIGSGFPNGLHDCIHVCTLLL*SLTGSS
Trigger: GCTGCTTCCCGTGAGCGACAAGAGGAGCAGAGTGCA...CACATGAATGCAGTCATGCAAACCGTTAGGAAAACCAGAGCCTATATGGAGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CAA 90 bp TCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCCTCACTCTCGGGCACTaGCTCTGTTTTGCTGAAGCG +
Preference number: 5 (lower is better)
Translates to: STDRYKSVGLEEGTPYRLLTLGH*LCFAEA
Trigger: CGCTTCAGCAAAACAGAGCAAGTGCCCGAGAGTGAG...GAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400111.8
ENST00000637651.1
CDS GCA 90 bp CAGTACCAACCTCTCCATCCAAGCTGCGAGACATGGTATAACGTTTaGTGGATGAGCGTTCAAAGTAAGGTGCTGGGCGATCTATCAACG +
Preference number: 5 (lower is better)
Translates to: QYQPLHPSCETWYNV*WMSVQSKVLGDLST
Trigger: CGTTGATAGATCGCCCAGCACCTTACTTTGAACGCTCATCCAGCAAACGTTATACCATGTCTCGCAGCTTGGATGGAGAGGTTGGTACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341928.7
CDS CCA 90 bp TGGATGAGCGTTCAAAGTAAGGTGCTGGGCGATCTATCAACGCACTaGCTCTTCTCGTTTGCGCTTGTGTCCTGCCACTATAACGAAACT +
Preference number: 5 (lower is better)
Translates to: WMSVQSKVLGDLSTH*LFSFALVSCHYNET
Trigger: AGTTTCGTTATAGTGGCAGGACACAAGCGCAAACGAGAAGAGCCAGTGCGTTGATAGATCGCCCAGCACCTTACTTTGAACGCTCATCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000542652.6
ENST00000544123.5
ENST00000545076.5
ENST00000584670.1
ENST00000637651.1
CDS CCA 90 bp TCACTGATGCTCCATCCAAGCTGCGAGACATGGTATAACGTTTGCTaGATGAGCGTTCAAAGTAAGGTGCTGGGCGATCTATCAACGCAC +
Preference number: 5 (lower is better)
Translates to: SLMLHPSCETWYNVC*MSVQSKVLGDLSTH
Trigger: GTGCGTTGATAGATCGCCCAGCACCTTACTTTGAACGCTCATCCAGCAAACGTTATACCATGTCTCGCAGCTTGGATGGAGCATCAGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000542652.6
ENST00000544123.5
ENST00000545076.5
ENST00000584670.1
ENST00000637651.1
CDS CCA 90 bp TACCAACCTCTCCATCCAAGCTGCGAGACATGGTATAACGTTTGCTaGATGAGCGTTCAAAGTAAGGTGCTGGGCGATCTATCAACGCAC +
Preference number: 5 (lower is better)
Translates to: YQPLHPSCETWYNVC*MSVQSKVLGDLSTH
Trigger: GTGCGTTGATAGATCGCCCAGCACCTTACTTTGAACGCTCATCCAGCAAACGTTATACCATGTCTCGCAGCTTGGATGGAGAGGTTGGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341928.7
CDS-3UTR CAA 90 bp GGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATTCTTCTGGAGCCTCCTGGTCCGGCTaGGATTCCGAGTCTGATCCA +
Preference number: 5 (lower is better)
Translates to: GKISLPVSLLMVKVNSSGASWSG*DSESDP
Trigger: TGGATCAGACTCGGAATCCAAGCCGGACCAGGAGGC...TCCAGAAGAATTGACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
CDS-3UTR CAA 90 bp GACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCTGGTTTGCAAACTCCTGTTCCTaGTCAGTGACCTCCCTCCGC +
Preference number: 5 (lower is better)
Translates to: DRYKSVGLEEGTPYRLWFANSCS*SVTSLR
Trigger: GCGGAGGGAGGTCACTGACAAGGAACAGGAGTTTGC...AAACCAGAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CAA 90 bp GGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATTCTTCTGGATGCACTCTGCTCCTCTaGTCGCTCACGGGAAGCAGC +
Preference number: 5 (lower is better)
Translates to: GKISLPVSLLMVKVNSSGCTLLL*SLTGSS
Trigger: GCTGCTTCCCGTGAGCGACAAGAGGAGCAGAGTGCA...TCCAGAAGAATTGACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CAA 90 bp CTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATGGCGGCACCTCCAAGTaGCCACCTGCAGCGCGCTTC +
Preference number: 5 (lower is better)
Translates to: LYYGKISLPVSLLMVKVNGGTSK*PPAARF
Trigger: GAAGCGCGCTGCAGGTGGCAACTTGGAGGTGCCGCC...ATTGACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637651.1
CDS GCA 90 bp GGCGATCTATCAACGCACTGGCTCTTCTCGTTTGCGCTTGTGTCCTaGCACTATAACGAAACTTGGAACCCAAGGTTAGGAATTTCTTGG +
Preference number: 5 (lower is better)
Translates to: GDLSTHWLFSFALVS*HYNETWNPRLGISW
Trigger: CCAAGAAATTCCTAACCTTGGGTTCCAAGTTTCGTTATAGTGGCAGGACACAAGCGCAAACGAGAAGAGCCAGTGCGTTGATAGATCGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000542652.6
ENST00000544123.5
ENST00000545076.5
ENST00000584670.1
ENST00000637651.1
CDS GCA 90 bp CATTCACTGATGCTCCATCCAAGCTGCGAGACATGGTATAACGTTTaGTGGATGAGCGTTCAAAGTAAGGTGCTGGGCGATCTATCAACG +
Preference number: 5 (lower is better)
Translates to: HSLMLHPSCETWYNV*WMSVQSKVLGDLST
Trigger: CGTTGATAGATCGCCCAGCACCTTACTTTGAACGCTCATCCAGCAAACGTTATACCATGTCTCGCAGCTTGGATGGAGCATCAGTGAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000542652.6
ENST00000544123.5
ENST00000545076.5
ENST00000584670.1
ENST00000637651.1
CDS-3UTR CAA 90 bp TCTTCTGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGCAAACTCCTGTTCCTaGTCAGTGACCTCCCTCCGC +
Preference number: 5 (lower is better)
Translates to: SSGLKFSTDRYKSVGLEEANSCS*SVTSLR
Trigger: GCGGAGGGAGGTCACTGACAAGGAACAGGAGTTTGC...CTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCAGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CAA 90 bp ATTCGGACAGGCTCTTCCTTCGGGGACCAAAGAGGCCCACTTTTAAGACCTCACGAAATCTTTAGAACCTaGGGCCAGGCAAATCTGTTT +
Preference number: 5 (lower is better)
Translates to: IRTGSSFGDQRGPLLRPHEIFRT*GQANLF
Trigger: AAACAGATTTGCCTGGCCCAAGGTTCTAAAGATTTC...GTGAGGTCTTAAAAGTGGGCCTCTTTGGTCCCCGAAGGAAGAGCCTGTCCGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637651.1
CDS-3UTR CAA 90 bp TGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACACTGGCTCTTCTCGTTaGCGCTTGTGTCCTGCCACT +
Preference number: 5 (lower is better)
Translates to: WTEIFHGQIQVSWVRRGNTGSSR*RLCPAT
Trigger: AGTGGCAGGACACAAGCGCAAACGAGAAGAGCCAGT...GTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CAA 90 bp GACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCTGGTTTACTGGCTCTTCTCGTTaGCGCTTGTGTCCTGCCACT +
Preference number: 5 (lower is better)
Translates to: DRYKSVGLEEGTPYRLWFTGSSR*RLCPAT
Trigger: AGTGGCAGGACACAAGCGCAAACGAGAAGAGCCAGT...AAACCAGAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CAA 90 bp ATTGCTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCGAGACTCGGCCTCCTaGATGGGGGCCAGGGATTCG +
Preference number: 5 (lower is better)
Translates to: IALLWEDLSASVFINGQGRDSAS*MGARDS
Trigger: CGAATCCCTGGCCCCCATCAAGGAGGCCGAGTCTCG...ACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAGCAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400111.8
ENST00000637651.1
CDS-3UTR CAA 90 bp CGTTGCTTCATGCATTATCGGTTTAGTGATGCTGAATCAGATTGCTTTATTATGCGAGACTCGGCCTCCTaGATGGGGGCCAGGGATTCG +
Preference number: 5 (lower is better)
Translates to: RCFMHYRFSDAESDCFIMRDSAS*MGARDS
Trigger: CGAATCCCTGGCCCCCATCAAGGAGGCCGAGTCTCG...CATAATAAAGCAATCTGATTCAGCATCACTAAACCGATAATGCATGAAGCAACG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400111.8
ENST00000637651.1
CDS-3UTR CAA 90 bp GGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATTCTTCTGGATCAGGGGATCTGTCCTaGCCTGTGGCATCCCGTTCT +
Preference number: 5 (lower is better)
Translates to: GKISLPVSLLMVKVNSSGSGDLS*PVASRS
Trigger: AGAACGGGATGCCACAGGCAAGGACAGATCCCCTGA...TCCAGAAGAATTGACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545076.5
CDS-3UTR CAA 90 bp GTGTTACATGAGACCACGGTTTATATTGTTGGTTATGAACGTGCAGGTATAGCTGCCTCCTGGTCCGGCTaGGATTCCGAGTCTGAGTCA +
Preference number: 5 (lower is better)
Translates to: VLHETTVYIVGYERAGIAASWSG*DSESES
Trigger: TGACTCAGACTCGGAATCCAAGCCGGACCAGGAGGC...AGCTATACCTGCACGTTCATAACCAACAATATAAACCGTGGTCTCATGTAACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637651.1
CDS CCA 90 bp TGGCTCTTCTCGTTTGCGCTTGTGTCCTGCCACTATAACGAAACTTaGAACCCAAGGTTAGGAATTTCTTGGGAGGTGCTTCTGGTAACA +
Preference number: 5 (lower is better)
Translates to: WLFSFALVSCHYNET*NPRLGISWEVLLVT
Trigger: TGTTACCAGAAGCACCTCCCAAGAAATTCCTAACCTTGGGTTCCAAGTTTCGTTATAGTGGCAGGACACAAGCGCAAACGAGAAGAGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000542652.6
ENST00000544123.5
ENST00000545076.5
ENST00000584670.1
ENST00000637651.1
CDS-3UTR CAA 90 bp AAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATGCAAACTCCTGTTCCTaGTCAGTGACCTCCCTCCGC +
Preference number: 5 (lower is better)
Translates to: KFSTDRYKSVGLEEGTPYANSCS*SVTSLR
Trigger: GCGGAGGGAGGTCACTGACAAGGAACAGGAGTTTGC...ATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CAA 90 bp TCTTCTGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGACTGGCTCTTCTCGTTaGCGCTTGTGTCCTGCCACT +
Preference number: 5 (lower is better)
Translates to: SSGLKFSTDRYKSVGLEETGSSR*RLCPAT
Trigger: AGTGGCAGGACACAAGCGCAAACGAGAAGAGCCAGT...CTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCAGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CAA 90 bp GACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCTGGTTTGAGAGATGCCTTTTGTaGTGGCGTACTGGCCAGTAC +
Preference number: 5 (lower is better)
Translates to: DRYKSVGLEEGTPYRLWFERCLL*WRTGQY
Trigger: GTACTGGCCAGTACGCCACAACAAAAGGCATCTCTC...AAACCAGAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CAA 90 bp AGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCTGGTTTTCCGAGAGATGCCTTTTGTaGTGGCGTACTGGCCAGTAC +
Preference number: 5 (lower is better)
Translates to: RYKSVGLEEGTPYRLWFSERCLL*WRTGQY
Trigger: GTACTGGCCAGTACGCCACAACAAAAGGCATCTCTC...GGAAAACCAGAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CAA 90 bp GAACTCCATATAGGCTCTGGTTTTCCTAACGGTTTGCATGACTGCATTCATGTGTCTGAGAGATGCCTTTaGTTGTGGCGTACTGGCCAG +
Preference number: 5 (lower is better)
Translates to: ELHIGSGFPNGLHDCIHVSERCL*LWRTGQ
Trigger: CTGGCCAGTACGCCACAACAAAAGGCATCTCTCAGA...CACATGAATGCAGTCATGCAAACCGTTAGGAAAACCAGAGCCTATATGGAGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CAA 90 bp GACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCTGGTTTTCTGAGAGATGCCTTTaGTTGTGGCGTACTGGCCAG +
Preference number: 5 (lower is better)
Translates to: DRYKSVGLEEGTPYRLWFSERCL*LWRTGQ
Trigger: CTGGCCAGTACGCCACAACAAAAGGCATCTCTCAGA...AAACCAGAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CAA 90 bp GAACTCCATATAGGCTCTGGTTTTCCTAACGGTTTGCATGACTGCATTCATGTGACCTCTGGTCCTCTCTaGGATTTCTCATCAGCGAGG +
Preference number: 5 (lower is better)
Translates to: ELHIGSGFPNGLHDCIHVTSGPL*DFSSAR
Trigger: CCTCGCTGATGAGAAATCCAAGAGAGGACCAGAGGT...CACATGAATGCAGTCATGCAAACCGTTAGGAAAACCAGAGCCTATATGGAGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400111.8
ENST00000637651.1
CDS-3UTR CAA 90 bp TGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTTGCCTGCCCCACCCTaGTTTCCTTTGAGCCATAGT +
Preference number: 5 (lower is better)
Translates to: WTEIFHGQIQVSWVRRGNLPAPP*FPLSHS
Trigger: ACTATGGCTCAAAGGAAACAAGGGTGGGGCAGGCAA...GTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544123.5
CDS-3UTR CAA 90 bp TGCTCACGGTCACCACCTTGTAAGTCACAATCTTTTTCAAATCACCATCAACTAGAGAAACGGAAAGGTTaGGGGTGGAAGGGGACTGCC +
Preference number: 5 (lower is better)
Translates to: CSRSPPCKSQSFSNHHQLEKRKG*GWKGTA
Trigger: GGCAGTCCCCTTCCACCCCAAACCTTTCCGTTTCTC...TAGTTGATGGTGATTTGAAAAAGATTGTGACTTACAAGGTGGTGACCGTGAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000637651.1
CDS-3UTR CAA 90 bp TCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATTCTTCTGGACTGAAATTTTCTGGGGTCTCCCTATGTaGCCCAGGTCGGCCTCGAAC +
Preference number: 5 (lower is better)
Translates to: SASVFINGQGQFFWTEIFWGLPM*PRSASN
Trigger: GTTCGAGGCCGACCTGGGCAACATAGGGAGACCCCA...GAAAATTTCAGTCCAGAAGAATTGACCTTGACCATTAATAAAGACACTGGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637651.1
CDS GCA 90 bp GTGCAGCTCGATCACTTTGTCTTCCAGTTCTTTAGTGTGGTTTGGTaGAAAGCGGAACTCACTAATGTAATCGCTCCCACATTCATCTGG +
Preference number: 5 (lower is better)
Translates to: VQLDHFVFQFFSVVW*KAELTNVIAPTFIW
Trigger: CCAGATGAATGTGGGAGCGATTACATTAGTGAGTTCCGCTTTGCACCAAACCACACTAAAGAACTGGAAGACAAAGTGATCGAGCTGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000540638.6
ENST00000542652.6
ENST00000544123.5
ENST00000545076.5
ENST00000581757.1
ENST00000637651.1
CDS-3UTR CAA 90 bp AAAGCAAGATTGGAAGCATTACATATTTCCAGAGGGTCAGAGAGTCATTACTGTGCAAACTCCTGTTCCTaGTCAGTGACCTCCCTCCGC +
Preference number: 5 (lower is better)
Translates to: KARLEALHISRGSESHYCANSCS*SVTSLR
Trigger: GCGGAGGGAGGTCACTGACAAGGAACAGGAGTTTGC...ACAGTAATGACTCTCTGACCCTCTGGAAATATGTAATGCTTCCAATCTTGCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000544123.5
ENST00000637651.1
CDS-3UTR CAA 90 bp GACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCTGGTTTGATATTCGAGCTGTTTaGCAGCCCTGGCAGCAAACT +
Preference number: 5 (lower is better)
Translates to: DRYKSVGLEEGTPYRLWFDIRAV*QPWQQT
Trigger: AGTTTGCTGCCAGGGCTGCAAAACAGCTCGAATATC...AAACCAGAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CAA 90 bp GAACTCCATATAGGCTCTGGTTTTCCTAACGGTTTGCATGACTGCATTCATGTGGATATTCGAGCTGTTTaGCAGCCCTGGCAGCAAACT +
Preference number: 5 (lower is better)
Translates to: ELHIGSGFPNGLHDCIHVDIRAV*QPWQQT
Trigger: AGTTTGCTGCCAGGGCTGCAAAACAGCTCGAATATC...CACATGAATGCAGTCATGCAAACCGTTAGGAAAACCAGAGCCTATATGGAGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CAA 90 bp GACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCTGGTTTTCTTCTCGTTTGCGCTaGTGTCCTGCCACTATAACG +
Preference number: 5 (lower is better)
Translates to: DRYKSVGLEEGTPYRLWFSSRLR*CPATIT
Trigger: CGTTATAGTGGCAGGACACAAGCGCAAACGAGAAGA...AAACCAGAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CAA 90 bp CAATTCTTCTGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAACTGGCTCTTCTCGTTaGCGCTTGTGTCCTGCCACT +
Preference number: 5 (lower is better)
Translates to: QFFWTEIFHGQIQVSWVRTGSSR*RLCPAT
Trigger: AGTGGCAGGACACAAGCGCAAACGAGAAGAGCCAGT...TCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCAGAAGAATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CAA 90 bp TCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATTCTTCTGGACTGAAATTTTCTGCACTCTGCTCCTCTaGTCGCTCACGGGAAGCAGC +
Preference number: 5 (lower is better)
Translates to: SASVFINGQGQFFWTEIFCTLLL*SLTGSS
Trigger: GCTGCTTCCCGTGAGCGACAAGAGGAGCAGAGTGCA...GAAAATTTCAGTCCAGAAGAATTGACCTTGACCATTAATAAAGACACTGGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CAA 90 bp CTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATTGCACTCTGCTCCTCTaGTCGCTCACGGGAAGCAGC +
Preference number: 5 (lower is better)
Translates to: LYYGKISLPVSLLMVKVNCTLLL*SLTGSS
Trigger: GCTGCTTCCCGTGAGCGACAAGAGGAGCAGAGTGCA...ATTGACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CAA 90 bp TGCTCACGGTCACCACCTTGTAAGTCACAATCTTTTTCAAATCACCATCAACTACTCACTCTCGGGCACTaGCTCTGTTTTGCTGAAGCG +
Preference number: 5 (lower is better)
Translates to: CSRSPPCKSQSFSNHHQLLTLGH*LCFAEA
Trigger: CGCTTCAGCAAAACAGAGCAAGTGCCCGAGAGTGAG...TAGTTGATGGTGATTTGAAAAAGATTGTGACTTACAAGGTGGTGACCGTGAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637651.1
CDS-3UTR CAA 90 bp GTTGCTTCATGCATTATCGGTTTAGTGATGCTGAATCAGATTGCTTTATTATGGGCCTCCTGGTCCGGCTaGGATTCCGAGTCAAGACCA +
Preference number: 5 (lower is better)
Translates to: VASCIIGLVMLNQIALLWASWSG*DSESRP
Trigger: TGGTCTTGACTCGGAATCCAAGCCGGACCAGGAGGC...CCATAATAAAGCAATCTGATTCAGCATCACTAAACCGATAATGCATGAAGCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545076.5
CDS TCA 90 bp CTGGCAGTGCATGCAAAAACTCCACAAGAATGGAAGCTCCAAATGTaGGACAAACCCATAAACCAATTCTCCATCCTCTTGGTAACCAGC +
Preference number: 5 (lower is better)
Translates to: LAVHAKTPQEWKLQM*DKPINQFSILLVTS
Trigger: GCTGGTTACCAAGAGGATGGAGAATTGGTTTATGGGTTTGTCTCACATTTGGAGCTTCCATTCTTGTGGAGTTTTTGCATGCACTGCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000578618.5
CDS CCA 90 bp CTTCAGTTTTTCTTGGGTGAATGGCGCATGCCTAGTAATGTCCACTaGAAGATTACAGTTCAGGTCCAGAGTAGGCTAACATTCAGCTCA +
Preference number: 5 (lower is better)
Translates to: LQFFLGEWRMPSNVH*KITVQVQSRLTFSS
Trigger: TGAGCTGAATGTTAGCCTACTCTGGACCTGAACTGTAATCTTCCAGTGGACATTACTAGGCATGCGCCATTCACCCAAGAAAAACTGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000580989.5
CDS-3UTR CAA 90 bp AGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCTGGTTTTCCATTCGGTCGTCATGGTaGATTGTTCTGGGATCAGCA +
Preference number: 5 (lower is better)
Translates to: RYKSVGLEEGTPYRLWFSIRSSW*IVLGSA
Trigger: TGCTGATCCCAGAACAATCAACCATGACGACCGAAT...GGAAAACCAGAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
CDS-3UTR CAA 90 bp GACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCTGGTTTATTCGGTCGTCATGGTaGATTGTTCTGGGATCAGCA +
Preference number: 5 (lower is better)
Translates to: DRYKSVGLEEGTPYRLWFIRSSW*IVLGSA
Trigger: TGCTGATCCCAGAACAATCAACCATGACGACCGAAT...AAACCAGAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
CDS-3UTR CAA 90 bp TGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACATTCGGTCGTCATGGTaGATTGTTCTGGGATCAGCA +
Preference number: 5 (lower is better)
Translates to: WTEIFHGQIQVSWVRRGNIRSSW*IVLGSA
Trigger: TGCTGATCCCAGAACAATCAACCATGACGACCGAAT...GTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
CDS-3UTR CAA 90 bp GTTGCTTCATGCATTATCGGTTTAGTGATGCTGAATCAGATTGCTTTATTATGGGCAAACTCCTGTTCCTaGTCAGTGACCTCCCTCCGC +
Preference number: 5 (lower is better)
Translates to: VASCIIGLVMLNQIALLWANSCS*SVTSLR
Trigger: GCGGAGGGAGGTCACTGACAAGGAACAGGAGTTTGC...CCATAATAAAGCAATCTGATTCAGCATCACTAAACCGATAATGCATGAAGCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CAA 90 bp CGTTGCTTCATGCATTATCGGTTTAGTGATGCTGAATCAGATTGCTTTATTATGGCAAACTCCTGTTCCTaGTCAGTGACCTCCCTCCGC +
Preference number: 5 (lower is better)
Translates to: RCFMHYRFSDAESDCFIMANSCS*SVTSLR
Trigger: GCGGAGGGAGGTCACTGACAAGGAACAGGAGTTTGC...CATAATAAAGCAATCTGATTCAGCATCACTAAACCGATAATGCATGAAGCAACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CAA 90 bp GGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATTCTTCTGGAATTCCTCTGTGGCTCTaGTGCAGCTCGATCACTTTG +
Preference number: 5 (lower is better)
Translates to: GKISLPVSLLMVKVNSSGIPLWL*CSSITL
Trigger: CAAAGTGATCGAGCTGCACAAGAGCCACAGAGGAAT...TCCAGAAGAATTGACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CAA 90 bp TCTTCTGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGATTCCTCTGTGGCTCTaGTGCAGCTCGATCACTTTG +
Preference number: 5 (lower is better)
Translates to: SSGLKFSTDRYKSVGLEEIPLWL*CSSITL
Trigger: CAAAGTGATCGAGCTGCACAAGAGCCACAGAGGAAT...CTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCAGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CAA 90 bp GAACTCCATATAGGCTCTGGTTTTCCTAACGGTTTGCATGACTGCATTCATGTGAATGGTGCTTTCAAATaGTTCAAACTCTCCCGGCCG +
Preference number: 5 (lower is better)
Translates to: ELHIGSGFPNGLHDCIHVNGAFK*FKLSRP
Trigger: CGGCCGGGAGAGTTTGAACAATTTGAAAGCACCATT...CACATGAATGCAGTCATGCAAACCGTTAGGAAAACCAGAGCCTATATGGAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CAA 90 bp TGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACAATGGTGCTTTCAAATaGTTCAAACTCTCCCGGCCG +
Preference number: 5 (lower is better)
Translates to: WTEIFHGQIQVSWVRRGNNGAFK*FKLSRP
Trigger: CGGCCGGGAGAGTTTGAACAATTTGAAAGCACCATT...GTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CAA 90 bp AAAGCAAGATTGGAAGCATTACATATTTCCAGAGGGTCAGAGAGTCATTACTGTACTGGCTCTTCTCGTTaGCGCTTGTGTCCTGCCACT +
Preference number: 5 (lower is better)
Translates to: KARLEALHISRGSESHYCTGSSR*RLCPAT
Trigger: AGTGGCAGGACACAAGCGCAAACGAGAAGAGCCAGT...ACAGTAATGACTCTCTGACCCTCTGGAAATATGTAATGCTTCCAATCTTGCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000544123.5
ENST00000637651.1
CDS-3UTR CAA 90 bp TTGCTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCACTGGCTCTTCTCGTTaGCGCTTGTGTCCTGCCACT +
Preference number: 5 (lower is better)
Translates to: LLYYGKISLPVSLLMVKVTGSSR*RLCPAT
Trigger: AGTGGCAGGACACAAGCGCAAACGAGAAGAGCCAGT...GACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CAA 90 bp CAAAGCAAGATTGGAAGCATTACATATTTCCAGAGGGTCAGAGAGTCATTACTGGAGAGATGCCTTTTGTaGTGGCGTACTGGCCAGTAC +
Preference number: 5 (lower is better)
Translates to: QSKIGSITYFQRVRESLLERCLL*WRTGQY
Trigger: GTACTGGCCAGTACGCCACAACAAAAGGCATCTCTC...CAGTAATGACTCTCTGACCCTCTGGAAATATGTAATGCTTCCAATCTTGCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000544123.5
ENST00000637651.1
CDS-3UTR CAA 90 bp CAATTCTTCTGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAGAGAGATGCCTTTTGTaGTGGCGTACTGGCCAGTAC +
Preference number: 5 (lower is better)
Translates to: QFFWTEIFHGQIQVSWVRERCLL*WRTGQY
Trigger: GTACTGGCCAGTACGCCACAACAAAAGGCATCTCTC...TCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCAGAAGAATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CAA 90 bp AAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATTCTGAGAGATGCCTTTaGTTGTGGCGTACTGGCCAG +
Preference number: 5 (lower is better)
Translates to: KFSTDRYKSVGLEEGTPYSERCL*LWRTGQ
Trigger: CTGGCCAGTACGCCACAACAAAAGGCATCTCTCAGA...ATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CAA 90 bp TCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCCTCGCTAATGTTGGTTaGATGTTTCATCAGGTCATC +
Preference number: 5 (lower is better)
Translates to: STDRYKSVGLEEGTPYRLLANVG*MFHQVI
Trigger: GATGACCTGATGAAACATCAAACCAACATTAGCGAG...GAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CAA 90 bp CAATTCTTCTGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAGGTCCCCTTGCCAGTTaGCTGTCTGTAGCTAAAAGC +
Preference number: 5 (lower is better)
Translates to: QFFWTEIFHGQIQVSWVRGPLAS*LSVAKS
Trigger: GCTTTTAGCTACAGACAGCAAACTGGCAAGGGGACC...TCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCAGAAGAATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000341928.7
CDS-3UTR CAA 90 bp CGTTGCTTCATGCATTATCGGTTTAGTGATGCTGAATCAGATTGCTTTATTATGCTGTCACTCGGGTCATaGTCTAGGGAGGCGCTCAAG +
Preference number: 5 (lower is better)
Translates to: RCFMHYRFSDAESDCFIMLSLGS*SREALK
Trigger: CTTGAGCGCCTCCCTAGACAATGACCCGAGTGACAG...CATAATAAAGCAATCTGATTCAGCATCACTAAACCGATAATGCATGAAGCAACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341928.7
CDS-3UTR CAA 90 bp TTGCTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCGGCACTTGCTCTGTTTaGCTGAAGCGTCTGCCTTCC +
Preference number: 5 (lower is better)
Translates to: LLYYGKISLPVSLLMVKVGTCSV*LKRLPS
Trigger: GGAAGGCAGACGCTTCAGCAAAACAGAGCAAGTGCC...GACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400111.8
ENST00000637651.1
CDS-3UTR CAA 90 bp CCTATGAATTCTGTTGGTTTTCGCGCAGACTCTAATAAACTGAAGATTTCAGAGGGCACTTGCTCTGTTTaGCTGAAGCGTCTGCCTTCC +
Preference number: 5 (lower is better)
Translates to: PMNSVGFRADSNKLKISEGTCSV*LKRLPS
Trigger: GGAAGGCAGACGCTTCAGCAAAACAGAGCAAGTGCC...CTCTGAAATCTTCAGTTTATTAGAGTCTGCGCGAAAACCAACAGAATTCATAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637651.1
CDS-3UTR CAA 90 bp TGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACCCACTGGACTCCGTCTaGGTTTCCATTTTCTCTTCA +
Preference number: 5 (lower is better)
Translates to: WTEIFHGQIQVSWVRRGNPLDSV*VSIFSS
Trigger: TGAAGAGAAAATGGAAACCAAGACGGAGTCCAGTGG...GTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000540638.6
ENST00000545076.5
CDS-3UTR CAA 90 bp TGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACATTCGGTCGTCATGGTaGATTGTTCTCGCAATGCAG +
Preference number: 5 (lower is better)
Translates to: WTEIFHGQIQVSWVRRGNIRSSW*IVLAMQ
Trigger: CTGCATTGCGAGAACAATCAACCATGACGACCGAAT...GTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544123.5
CDS-3UTR CAA 90 bp AAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATGATATTCGAGCTGTTTaGCAGCCCTGGCAGCAAACT +
Preference number: 5 (lower is better)
Translates to: KFSTDRYKSVGLEEGTPYDIRAV*QPWQQT
Trigger: AGTTTGCTGCCAGGGCTGCAAAACAGCTCGAATATC...ATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CAA 90 bp CAAAGCAAGATTGGAAGCATTACATATTTCCAGAGGGTCAGAGAGTCATTACTGGATATTCGAGCTGTTTaGCAGCCCTGGCAGCAAACT +
Preference number: 5 (lower is better)
Translates to: QSKIGSITYFQRVRESLLDIRAV*QPWQQT
Trigger: AGTTTGCTGCCAGGGCTGCAAAACAGCTCGAATATC...CAGTAATGACTCTCTGACCCTCTGGAAATATGTAATGCTTCCAATCTTGCTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000544123.5
ENST00000637651.1
CDS-3UTR CAA 90 bp GACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCTGGTTTTCGAGAAGTATCACTTaGCACTGCATGCTTTTAGGC +
Preference number: 5 (lower is better)
Translates to: DRYKSVGLEEGTPYRLWFSRSIT*HCMLLG
Trigger: GCCTAAAAGCATGCAGTGCAAAGTGATACTTCTCGA...AAACCAGAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CAA 90 bp AGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCTGGTTTTCCTTTATCAAACAGCACTaGTCCTCTGGAGCGTTTCTC +
Preference number: 5 (lower is better)
Translates to: RYKSVGLEEGTPYRLWFSFIKQH*SSGAFL
Trigger: GAGAAACGCTCCAGAGGACAAGTGCTGTTTGATAAA...GGAAAACCAGAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CAA 90 bp GACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCTGGTTTTTTATCAAACAGCACTaGTCCTCTGGAGCGTTTCTC +
Preference number: 5 (lower is better)
Translates to: DRYKSVGLEEGTPYRLWFFIKQH*SSGAFL
Trigger: GAGAAACGCTCCAGAGGACAAGTGCTGTTTGATAAA...AAACCAGAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTC
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CAA 90 bp ACCCTCTTTAGCTTTCCCAGTCATAGTAACAATTCTCCCGGAGACAGTGTCATATTTATCAAACAGCACTaGTCCTCTGGAGCGTTTCTC +
Preference number: 5 (lower is better)
Translates to: TLFSFPSHSNNSPGDSVIFIKQH*SSGAFL
Trigger: GAGAAACGCTCCAGAGGACAAGTGCTGTTTGATAAA...TATGACACTGTCTCCGGGAGAATTGTTACTATGACTGGGAAAGCTAAAGAGGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637651.1
CDS-3UTR CAA 90 bp GTGTTACATGAGACCACGGTTTATATTGTTGGTTATGAACGTGCAGGTATAGCTATTCCTCTGTGGCTCTaGTGCAGCTCGATCACTTTG +
Preference number: 5 (lower is better)
Translates to: VLHETTVYIVGYERAGIAIPLWL*CSSITL
Trigger: CAAAGTGATCGAGCTGCACAAGAGCCACAGAGGAAT...AGCTATACCTGCACGTTCATAACCAACAATATAAACCGTGGTCTCATGTAACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CAA 90 bp AAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATACTTTCCATAAACGCTaGGCAGCTCGATGGTTTGGC +
Preference number: 5 (lower is better)
Translates to: KFSTDRYKSVGLEEGTPYTFHKR*AARWFG
Trigger: GCCAAACCATCGAGCTGCCAAGCGTTTATGGAAAGT...ATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CAA 90 bp CAATTCTTCTGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAACTTTCCATAAACGCTaGGCAGCTCGATGGTTTGGC +
Preference number: 5 (lower is better)
Translates to: QFFWTEIFHGQIQVSWVRTFHKR*AARWFG
Trigger: GCCAAACCATCGAGCTGCCAAGCGTTTATGGAAAGT...TCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCAGAAGAATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CAA 90 bp TGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACAAGGTTAGGAATTTCTaGGGAGGTGCTTCTGGTAAC +
Preference number: 5 (lower is better)
Translates to: WTEIFHGQIQVSWVRRGNKVRNF*GGASGN
Trigger: GTTACCAGAAGCACCTCCCAAGAAATTCCTAACCTT...GTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CAA 90 bp GACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCTGGTTTAAGGTTAGGAATTTCTaGGGAGGTGCTTCTGGTAAC +
Preference number: 5 (lower is better)
Translates to: DRYKSVGLEEGTPYRLWFKVRNF*GGASGN
Trigger: GTTACCAGAAGCACCTCCCAAGAAATTCCTAACCTT...AAACCAGAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CAA 90 bp AAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATTCTTCTCGTTTGCGCTaGTGTCCTGCCACTATAACG +
Preference number: 5 (lower is better)
Translates to: KFSTDRYKSVGLEEGTPYSSRLR*CPATIT
Trigger: CGTTATAGTGGCAGGACACAAGCGCAAACGAGAAGA...ATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CAA 90 bp GTGTTACATGAGACCACGGTTTATATTGTTGGTTATGAACGTGCAGGTATAGCTTCTTCTCGTTTGCGCTaGTGTCCTGCCACTATAACG +
Preference number: 5 (lower is better)
Translates to: VLHETTVYIVGYERAGIASSRLR*CPATIT
Trigger: CGTTATAGTGGCAGGACACAAGCGCAAACGAGAAGA...AGCTATACCTGCACGTTCATAACCAACAATATAAACCGTGGTCTCATGTAACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CAA 90 bp TTGCTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCGAGAGATGCCTTTTGTaGTGGCGTACTGGCCAGTAC +
Preference number: 5 (lower is better)
Translates to: LLYYGKISLPVSLLMVKVERCLL*WRTGQY
Trigger: GTACTGGCCAGTACGCCACAACAAAAGGCATCTCTC...GACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CAA 90 bp TTGCTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCTCTGAGAGATGCCTTTaGTTGTGGCGTACTGGCCAG +
Preference number: 5 (lower is better)
Translates to: LLYYGKISLPVSLLMVKVSERCL*LWRTGQ
Trigger: CTGGCCAGTACGCCACAACAAAAGGCATCTCTCAGA...GACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CAA 90 bp GACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCTGGTTTTTACGGCAGTGTCTGTaGAGGTTTCTAAGAAGGTTC +
Preference number: 5 (lower is better)
Translates to: DRYKSVGLEEGTPYRLWFLRQCL*RFLRRF
Trigger: GAACCTTCTTAGAAACCTCAACAGACACTGCCGTAA...AAACCAGAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CAA 90 bp GAACTCCATATAGGCTCTGGTTTTCCTAACGGTTTGCATGACTGCATTCATGTGTTACGGCAGTGTCTGTaGAGGTTTCTAAGAAGGTTC +
Preference number: 5 (lower is better)
Translates to: ELHIGSGFPNGLHDCIHVLRQCL*RFLRRF
Trigger: GAACCTTCTTAGAAACCTCAACAGACACTGCCGTAA...CACATGAATGCAGTCATGCAAACCGTTAGGAAAACCAGAGCCTATATGGAGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CAA 90 bp TGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTTTCTGAACCCAGCTTaGAGAAGTAGAAGTAACCCC +
Preference number: 5 (lower is better)
Translates to: WTEIFHGQIQVSWVRRGNFLNPA*RSRSNP
Trigger: GGGGTTACTTCTACTTCTCAAAGCTGGGTTCAGAAA...GTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000544123.5
ENST00000637651.1
CDS-3UTR CAA 90 bp GACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCTGGTTTTTTCTGAACCCAGCTTaGAGAAGTAGAAGTAACCCC +
Preference number: 5 (lower is better)
Translates to: DRYKSVGLEEGTPYRLWFFLNPA*RSRSNP
Trigger: GGGGTTACTTCTACTTCTCAAAGCTGGGTTCAGAAA...AAACCAGAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTC
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000544123.5
ENST00000637651.1
CDS-3UTR CAA 90 bp AGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCTGGTTTTCCTTTCCGTCTTCACCGTaGAGGACTCAAAATGAGGTT +
Preference number: 5 (lower is better)
Translates to: RYKSVGLEEGTPYRLWFSFPSSP*RTQNEV
Trigger: AACCTCATTTTGAGTCCTCAACGGTGAAGACGGAAA...GGAAAACCAGAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CAA 90 bp GAACTCCATATAGGCTCTGGTTTTCCTAACGGTTTGCATGACTGCATTCATGTGTTTCCGTCTTCACCGTaGAGGACTCAAAATGAGGTT +
Preference number: 5 (lower is better)
Translates to: ELHIGSGFPNGLHDCIHVFPSSP*RTQNEV
Trigger: AACCTCATTTTGAGTCCTCAACGGTGAAGACGGAAA...CACATGAATGCAGTCATGCAAACCGTTAGGAAAACCAGAGCCTATATGGAGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CAA 90 bp CAAAGCAAGATTGGAAGCATTACATATTTCCAGAGGGTCAGAGAGTCATTACTGTCACTGCTCCAGTCCTaGCTTCTGAGCACAGAATTC +
Preference number: 5 (lower is better)
Translates to: QSKIGSITYFQRVRESLLSLLQS*LLSTEF
Trigger: GAATTCTGTGCTCAGAAGCAAGGACTGGAGCAGTGA...CAGTAATGACTCTCTGACCCTCTGGAAATATGTAATGCTTCCAATCTTGCTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544123.5
CDS TCA 90 bp TGCTTAGTCTCTAGGGTTGATGGGACAGTTTTCTGGAAAATTATTTaGCGAGAAGTAACCACAGAGTCAGCAGAGTCTCCTTCCTGCATT +
Preference number: 5 (lower is better)
Translates to: CLVSRVDGTVFWKII*REVTTESAESPSCI
Trigger: AATGCAGGAAGGAGACTCTGCTGACTCTGTGGTTACTTCTCGTCAAATAATTTTCCAGAAAACTGTCCCATCAACCCTAGAGACTAAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579271.5
CDS GCA 90 bp AATAGCATTGAAACTGTAGGACCAACAGGTTTTTCTTTGTTTCTCTaGCAGGGTATTTACCGTCTCACACACACTACCTGGTCATGGTCA +
Preference number: 5 (lower is better)
Translates to: NSIETVGPTGFSLFL*QGIYRLTHTTWSWS
Trigger: TGACCATGACCAGGTAGTGTGTGTGAGACGGTAAATACCCTGGCAGAGAAACAAAGAAAAACCTGTTGGTCCTACAGTTTCAATGCTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000578618.5
ENST00000579951.2
CDS GCA 90 bp CATAGAAGCATAGACTCTGCTCTTCCTTTATCCTCTAACTGGCAGTaGATGCAAAAACTCCACAAGAATGGAAGCTCCAAATGTGAGACA +
Preference number: 5 (lower is better)
Translates to: HRSIDSALPLSSNWQ*MQKLHKNGSSKCET
Trigger: TGTCTCACATTTGGAGCTTCCATTCTTGTGGAGTTTTTGCATGCACTGCCAGTTAGAGGATAAAGGAAGAGCAGAGTCTATGCTTCTATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000578618.5
CDS GCA 90 bp ATCCTATCTAGGATTCACTTCAGTTTTTCTTGGGTGAATGGCGCATaGCTAGTAATGTCCACTGGAAGATTACAGTTCAGGTCCAGAGTA +
Preference number: 5 (lower is better)
Translates to: ILSRIHFSFSWVNGA*LVMSTGRLQFRSRV
Trigger: TACTCTGGACCTGAACTGTAATCTTCCAGTGGACATTACTAGGCATGCGCCATTCACCCAAGAAAAACTGAAGTGAATCCTAGATAGGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000580989.5
CDS CCA 90 bp CACAAGCATAGAAGCATAGACTCTGCTCTTCCTTTATCCTCTAACTaGCAGTGCATGCAAAAACTCCACAAGAATGGAAGCTCCAAATGT +
Preference number: 5 (lower is better)
Translates to: HKHRSIDSALPLSSN*QCMQKLHKNGSSKC
Trigger: ACATTTGGAGCTTCCATTCTTGTGGAGTTTTTGCATGCACTGCCAGTTAGAGGATAAAGGAAGAGCAGAGTCTATGCTTCTATGCTTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000578618.5
CDS-3UTR CAA 90 bp AAAGCAAGATTGGAAGCATTACATATTTCCAGAGGGTCAGAGAGTCATTACTGTGATATTCGAGCTGTTTaGCAGCCCTGGCAGCAAACT +
Preference number: 5 (lower is better)
Translates to: KARLEALHISRGSESHYCDIRAV*QPWQQT
Trigger: AGTTTGCTGCCAGGGCTGCAAAACAGCTCGAATATC...ACAGTAATGACTCTCTGACCCTCTGGAAATATGTAATGCTTCCAATCTTGCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000544123.5
ENST00000637651.1
CDS-3UTR CAA 90 bp TATCAAACAGCACTTGTCCTCTGGAGCGTTTCTCTACATCACAGGTATATTCTGTCGAGAAGTATCACTTaGCACTGCATGCTTTTAGGC +
Preference number: 5 (lower is better)
Translates to: YQTALVLWSVSLHHRYILSRSIT*HCMLLG
Trigger: GCCTAAAAGCATGCAGTGCAAAGTGATACTTCTCGA...CAGAATATACCTGTGATGTAGAGAAACGCTCCAGAGGACAAGTGCTGTTTGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580866.2
CDS-3UTR CAA 90 bp TATCAAACAGCACTTGTCCTCTGGAGCGTTTCTCTACATCACAGGTATATTCTGTTTATCAAACAGCACTaGTCCTCTGGAGCGTTTCTC +
Preference number: 5 (lower is better)
Translates to: YQTALVLWSVSLHHRYILFIKQH*SSGAFL
Trigger: GAGAAACGCTCCAGAGGACAAGTGCTGTTTGATAAA...CAGAATATACCTGTGATGTAGAGAAACGCTCCAGAGGACAAGTGCTGTTTGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580866.2
CDS-3UTR CAA 90 bp GAACTCCATATAGGCTCTGGTTTTCCTAACGGTTTGCATGACTGCATTCATGTGGAAATCTTTAGAACCTaGGGCCAGGCAAATCTGTTT +
Preference number: 5 (lower is better)
Translates to: ELHIGSGFPNGLHDCIHVEIFRT*GQANLF
Trigger: AAACAGATTTGCCTGGCCCAAGGTTCTAAAGATTTC...CACATGAATGCAGTCATGCAAACCGTTAGGAAAACCAGAGCCTATATGGAGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CAA 90 bp TGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACGAAATCTTTAGAACCTaGGGCCAGGCAAATCTGTTT +
Preference number: 5 (lower is better)
Translates to: WTEIFHGQIQVSWVRRGNEIFRT*GQANLF
Trigger: AAACAGATTTGCCTGGCCCAAGGTTCTAAAGATTTC...GTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CAA 90 bp GTGTTACATGAGACCACGGTTTATATTGTTGGTTATGAACGTGCAGGTATAGCTAATGGTGCTTTCAAATaGTTCAAACTCTCCCGGCCG +
Preference number: 5 (lower is better)
Translates to: VLHETTVYIVGYERAGIANGAFK*FKLSRP
Trigger: CGGCCGGGAGAGTTTGAACAATTTGAAAGCACCATT...AGCTATACCTGCACGTTCATAACCAACAATATAAACCGTGGTCTCATGTAACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CAA 90 bp CAATTCTTCTGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAATGGTGCTTTCAAATaGTTCAAACTCTCCCGGCCG +
Preference number: 5 (lower is better)
Translates to: QFFWTEIFHGQIQVSWVRNGAFK*FKLSRP
Trigger: CGGCCGGGAGAGTTTGAACAATTTGAAAGCACCATT...TCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCAGAAGAATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CAA 90 bp TCTTCTGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGAAGGTTAGGAATTTCTaGGGAGGTGCTTCTGGTAAC +
Preference number: 5 (lower is better)
Translates to: SSGLKFSTDRYKSVGLEEKVRNF*GGASGN
Trigger: GTTACCAGAAGCACCTCCCAAGAAATTCCTAACCTT...CTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCAGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CAA 90 bp TTGCTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCTCTTCTCGTTTGCGCTaGTGTCCTGCCACTATAACG +
Preference number: 5 (lower is better)
Translates to: LLYYGKISLPVSLLMVKVSSRLR*CPATIT
Trigger: CGTTATAGTGGCAGGACACAAGCGCAAACGAGAAGA...GACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CAA 90 bp AAAGCAAGATTGGAAGCATTACATATTTCCAGAGGGTCAGAGAGTCATTACTGTTCTTCTCGTTTGCGCTaGTGTCCTGCCACTATAACG +
Preference number: 5 (lower is better)
Translates to: KARLEALHISRGSESHYCSSRLR*CPATIT
Trigger: CGTTATAGTGGCAGGACACAAGCGCAAACGAGAAGA...ACAGTAATGACTCTCTGACCCTCTGGAAATATGTAATGCTTCCAATCTTGCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000544123.5
ENST00000637651.1
CDS-3UTR CAA 90 bp GACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCTGGTTTCTCGCTAATGTTGGTTaGATGTTTCATCAGGTCATC +
Preference number: 5 (lower is better)
Translates to: DRYKSVGLEEGTPYRLWFLANVG*MFHQVI
Trigger: GATGACCTGATGAAACATCAAACCAACATTAGCGAG...AAACCAGAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CAA 90 bp TGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACCTCGCTAATGTTGGTTaGATGTTTCATCAGGTCATC +
Preference number: 5 (lower is better)
Translates to: WTEIFHGQIQVSWVRRGNLANVG*MFHQVI
Trigger: GATGACCTGATGAAACATCAAACCAACATTAGCGAG...GTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CAA 90 bp GGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATTCTTCTGGATTACGGCAGTGTCTGTaGAGGTTTCTAAGAAGGTTC +
Preference number: 5 (lower is better)
Translates to: GKISLPVSLLMVKVNSSGLRQCL*RFLRRF
Trigger: GAACCTTCTTAGAAACCTCAACAGACACTGCCGTAA...TCCAGAAGAATTGACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CAA 90 bp TCTTCTGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGTTTTCCTAACGGTTaGCATGACTGCATTCATGTG +
Preference number: 5 (lower is better)
Translates to: SSGLKFSTDRYKSVGLEEGFPNG*HDCIHV
Trigger: CACATGAATGCAGTCATGCAAACCGTTAGGAAAACC...CTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCAGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CAA 90 bp TGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACCCACGGTTTATATTGTaGGTTATGAACGTGCAGGTA +
Preference number: 5 (lower is better)
Translates to: WTEIFHGQIQVSWVRRGNPRFIL*VMNVQV
Trigger: TACCTGCACGTTCATAACCAACAATATAAACCGTGG...GTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CAA 90 bp GACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCTGGTTTCCACGGTTTATATTGTaGGTTATGAACGTGCAGGTA +
Preference number: 5 (lower is better)
Translates to: DRYKSVGLEEGTPYRLWFPRFIL*VMNVQV
Trigger: TACCTGCACGTTCATAACCAACAATATAAACCGTGG...AAACCAGAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CAA 90 bp GAACTCCATATAGGCTCTGGTTTTCCTAACGGTTTGCATGACTGCATTCATGTGAGACCACGGTTTATATaGTTGGTTATGAACGTGCAG +
Preference number: 5 (lower is better)
Translates to: ELHIGSGFPNGLHDCIHVRPRFI*LVMNVQ
Trigger: CTGCACGTTCATAACCAACAATATAAACCGTGGTCT...CACATGAATGCAGTCATGCAAACCGTTAGGAAAACCAGAGCCTATATGGAGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CAA 90 bp GACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATAGGCTCTGGTTTAGACCACGGTTTATATaGTTGGTTATGAACGTGCAG +
Preference number: 5 (lower is better)
Translates to: DRYKSVGLEEGTPYRLWFRPRFI*LVMNVQ
Trigger: CTGCACGTTCATAACCAACAATATAAACCGTGGTCT...AAACCAGAGCCTATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CAA 90 bp CTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATACCTCTGGTCCTCTCTaGGATTTCTCATCAGCGAGG +
Preference number: 5 (lower is better)
Translates to: LYYGKISLPVSLLMVKVNTSGPL*DFSSAR
Trigger: CCTCGCTGATGAGAAATCCAAGAGAGGACCAGAGGT...ATTGACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400111.8
ENST00000637651.1
CDS-3UTR CAA 90 bp TTGCTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCAGCTGTGGAGCCTTCTaGAGGTCATCTTCTTCAGGA +
Preference number: 5 (lower is better)
Translates to: LLYYGKISLPVSLLMVKVSCGAF*RSSSSG
Trigger: TCCTGAAGAAGATGACCTCAAGAAGGCTCCACAGCT...GACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400111.8
ENST00000637651.1
CDS TCA 90 bp GTAGCATTGACTCTCCGGCTTCTATTCCTCCAGGAATATTCTCTGTaGAACACAGAAAGATCCCGGAAAGGTAAAAGCAATTGCTTTCTA +
Preference number: 5 (lower is better)
Translates to: VALTLRLLFLQEYSL*NTERSRKGKSNCFL
Trigger: TAGAAAGCAATTGCTTTTACCTTTCCGGGATCTTTCTGTGTTTCACAGAGAATATTCCTGGAGGAATAGAAGCCGGAGAGTCAATGCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582592.1
CDS-3UTR CAA 90 bp AGCAAGATTGGAAGCATTACATATTTCCAGAGGGTCAGAGAGTCATTACTGTTTATTCGGTCGTCATGGTaGATTGTTCTGGGATCAGCA +
Preference number: 5 (lower is better)
Translates to: SKIGSITYFQRVRESLLFIRSSW*IVLGSA
Trigger: TGCTGATCCCAGAACAATCAACCATGACGACCGAAT...AAACAGTAATGACTCTCTGACCCTCTGGAAATATGTAATGCTTCCAATCTTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
CDS-3UTR CAA 90 bp CAAAGCAAGATTGGAAGCATTACATATTTCCAGAGGGTCAGAGAGTCATTACTGTCGAGAAGTATCACTTaGCACTGCATGCTTTTAGGC +
Preference number: 5 (lower is better)
Translates to: QSKIGSITYFQRVRESLLSRSIT*HCMLLG
Trigger: GCCTAAAAGCATGCAGTGCAAAGTGATACTTCTCGA...CAGTAATGACTCTCTGACCCTCTGGAAATATGTAATGCTTCCAATCTTGCTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000544123.5
ENST00000637651.1
CDS-3UTR CAA 90 bp AAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATTCGAGAAGTATCACTTaGCACTGCATGCTTTTAGGC +
Preference number: 5 (lower is better)
Translates to: KFSTDRYKSVGLEEGTPYSRSIT*HCMLLG
Trigger: GCCTAAAAGCATGCAGTGCAAAGTGATACTTCTCGA...ATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CAA 90 bp GTGTTACATGAGACCACGGTTTATATTGTTGGTTATGAACGTGCAGGTATAGCTTTTATCAAACAGCACTaGTCCTCTGGAGCGTTTCTC +
Preference number: 5 (lower is better)
Translates to: VLHETTVYIVGYERAGIAFIKQH*SSGAFL
Trigger: GAGAAACGCTCCAGAGGACAAGTGCTGTTTGATAAA...AGCTATACCTGCACGTTCATAACCAACAATATAAACCGTGGTCTCATGTAACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CAA 90 bp TTCAGTGCATTTGCCATTTTTATTTCGCTATGCAGAAACATACATTCACCATGGATTCCTCTGTGGCTCTaGTGCAGCTCGATCACTTTG +
Preference number: 5 (lower is better)
Translates to: FSAFAIFISLCRNIHSPWIPLWL*CSSITL
Trigger: CAAAGTGATCGAGCTGCACAAGAGCCACAGAGGAAT...CCATGGTGAATGTATGTTTCTGCATAGCGAAATAAAAATGGCAAATGCACTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000544123.5
CDS-3UTR CAA 90 bp GTTGCTTCATGCATTATCGGTTTAGTGATGCTGAATCAGATTGCTTTATTATGGATTCCTCTGTGGCTCTaGTGCAGCTCGATCACTTTG +
Preference number: 5 (lower is better)
Translates to: VASCIIGLVMLNQIALLWIPLWL*CSSITL
Trigger: CAAAGTGATCGAGCTGCACAAGAGCCACAGAGGAAT...CCATAATAAAGCAATCTGATTCAGCATCACTAAACCGATAATGCATGAAGCAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CAA 90 bp TCTTCTGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGAAATCTTTAGAACCTaGGGCCAGGCAAATCTGTTT +
Preference number: 5 (lower is better)
Translates to: SSGLKFSTDRYKSVGLEEEIFRT*GQANLF
Trigger: AAACAGATTTGCCTGGCCCAAGGTTCTAAAGATTTC...CTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCAGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CAA 90 bp CGTTGCTTCATGCATTATCGGTTTAGTGATGCTGAATCAGATTGCTTTATTATGACTTTCCATAAACGCTaGGCAGCTCGATGGTTTGGC +
Preference number: 5 (lower is better)
Translates to: RCFMHYRFSDAESDCFIMTFHKR*AARWFG
Trigger: GCCAAACCATCGAGCTGCCAAGCGTTTATGGAAAGT...CATAATAAAGCAATCTGATTCAGCATCACTAAACCGATAATGCATGAAGCAACG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CAA 90 bp GTTGCTTCATGCATTATCGGTTTAGTGATGCTGAATCAGATTGCTTTATTATGGACTTTCCATAAACGCTaGGCAGCTCGATGGTTTGGC +
Preference number: 5 (lower is better)
Translates to: VASCIIGLVMLNQIALLWTFHKR*AARWFG
Trigger: GCCAAACCATCGAGCTGCCAAGCGTTTATGGAAAGT...CCATAATAAAGCAATCTGATTCAGCATCACTAAACCGATAATGCATGAAGCAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CAA 90 bp TCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATTCTTCTGGACTGAAATTTTCTCTTCTCGTTTGCGCTaGTGTCCTGCCACTATAACG +
Preference number: 5 (lower is better)
Translates to: SASVFINGQGQFFWTEIFSSRLR*CPATIT
Trigger: CGTTATAGTGGCAGGACACAAGCGCAAACGAGAAGA...GAAAATTTCAGTCCAGAAGAATTGACCTTGACCATTAATAAAGACACTGGCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CAA 90 bp GTGTTACATGAGACCACGGTTTATATTGTTGGTTATGAACGTGCAGGTATAGCTTTACGGCAGTGTCTGTaGAGGTTTCTAAGAAGGTTC +
Preference number: 5 (lower is better)
Translates to: VLHETTVYIVGYERAGIALRQCL*RFLRRF
Trigger: GAACCTTCTTAGAAACCTCAACAGACACTGCCGTAA...AGCTATACCTGCACGTTCATAACCAACAATATAAACCGTGGTCTCATGTAACAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CAA 90 bp GTGTTACATGAGACCACGGTTTATATTGTTGGTTATGAACGTGCAGGTATAGCTTTTCTGAACCCAGCTTaGAGAAGTAGAAGTAACCCC +
Preference number: 5 (lower is better)
Translates to: VLHETTVYIVGYERAGIAFLNPA*RSRSNP
Trigger: GGGGTTACTTCTACTTCTCAAAGCTGGGTTCAGAAA...AGCTATACCTGCACGTTCATAACCAACAATATAAACCGTGGTCTCATGTAACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000544123.5
ENST00000637651.1
CDS-3UTR CAA 90 bp CAAAGCAAGATTGGAAGCATTACATATTTCCAGAGGGTCAGAGAGTCATTACTGTTTCCGTCTTCACCGTaGAGGACTCAAAATGAGGTT +
Preference number: 5 (lower is better)
Translates to: QSKIGSITYFQRVRESLLFPSSP*RTQNEV
Trigger: AACCTCATTTTGAGTCCTCAACGGTGAAGACGGAAA...CAGTAATGACTCTCTGACCCTCTGGAAATATGTAATGCTTCCAATCTTGCTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000544123.5
ENST00000637651.1
CDS-3UTR CAA 90 bp GTGTTACATGAGACCACGGTTTATATTGTTGGTTATGAACGTGCAGGTATAGCTTTTCCGTCTTCACCGTaGAGGACTCAAAATGAGGTT +
Preference number: 5 (lower is better)
Translates to: VLHETTVYIVGYERAGIAFPSSP*RTQNEV
Trigger: AACCTCATTTTGAGTCCTCAACGGTGAAGACGGAAA...AGCTATACCTGCACGTTCATAACCAACAATATAAACCGTGGTCTCATGTAACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CAA 90 bp GTGTTACATGAGACCACGGTTTATATTGTTGGTTATGAACGTGCAGGTATAGCTGGTTTTCCTAACGGTTaGCATGACTGCATTCATGTG +
Preference number: 5 (lower is better)
Translates to: VLHETTVYIVGYERAGIAGFPNG*HDCIHV
Trigger: CACATGAATGCAGTCATGCAAACCGTTAGGAAAACC...AGCTATACCTGCACGTTCATAACCAACAATATAAACCGTGGTCTCATGTAACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CAA 90 bp TCTTCTGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGAGACCACGGTTTATATaGTTGGTTATGAACGTGCAG +
Preference number: 5 (lower is better)
Translates to: SSGLKFSTDRYKSVGLEERPRFI*LVMNVQ
Trigger: CTGCACGTTCATAACCAACAATATAAACCGTGGTCT...CTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCAGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CAA 90 bp ATTGCTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTAGCTGTGGAGCCTTCTaGAGGTCATCTTCTTCAGGA +
Preference number: 5 (lower is better)
Translates to: IALLWEDLSASVFINGQGSCGAF*RSSSSG
Trigger: TCCTGAAGAAGATGACCTCAAGAAGGCTCCACAGCT...ACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAGCAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400111.8
ENST00000637651.1
CDS-3UTR CAA 90 bp TTGCTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCCCACTGGACTCCGTCTaGGTTTCCATTTTCTCTTCA +
Preference number: 5 (lower is better)
Translates to: LLYYGKISLPVSLLMVKVPLDSV*VSIFSS
Trigger: TGAAGAGAAAATGGAAACCAAGACGGAGTCCAGTGG...GACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000540638.6
ENST00000545076.5
CDS-3UTR CAA 90 bp AAAGCAAGATTGGAAGCATTACATATTTCCAGAGGGTCAGAGAGTCATTACTGTCCACCCTTGTTTCCTTaGAGCCATAGTGATGTCACA +
Preference number: 5 (lower is better)
Translates to: KARLEALHISRGSESHYCPPLFP*SHSDVT
Trigger: TGTGACATCACTATGGCTCAAAGGAAACAAGGGTGG...ACAGTAATGACTCTCTGACCCTCTGGAAATATGTAATGCTTCCAATCTTGCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544123.5
CDS-3UTR CAA 90 bp AAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATATAGATGAGCTTCTTTaGTCTCCCAATACCTCCTCC +
Preference number: 5 (lower is better)
Translates to: KFSTDRYKSVGLEEGTPYIDELL*SPNTSS
Trigger: GGAGGAGGTATTGGGAGACAAAAGAAGCTCATCTAT...ATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545076.5
CDS-3UTR CAA 90 bp TTGCTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCGAAAACCAGGTGCTCTaGTTTGGTAAAGCAGAGACG +
Preference number: 5 (lower is better)
Translates to: LLYYGKISLPVSLLMVKVENQVL*FGKAET
Trigger: CGTCTCTGCTTTACCAAACAAGAGCACCTGGTTTTC...GACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637651.1
CDS-3UTR CAA 90 bp GAACTCCATATAGGCTCTGGTTTTCCTAACGGTTTGCATGACTGCATTCATGTGTTTTCTTTATCACACTaGGCTAGTGGGGAAACCAAT +
Preference number: 5 (lower is better)
Translates to: ELHIGSGFPNGLHDCIHVFSLSH*ASGETN
Trigger: ATTGGTTTCCCCACTAGCCAAGTGTGATAAAGAAAA...CACATGAATGCAGTCATGCAAACCGTTAGGAAAACCAGAGCCTATATGGAGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637651.1
CDS-3UTR CAA 90 bp TTGCTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCTCGAGAAGTATCACTTaGCACTGCATGCTTTTAGGC +
Preference number: 5 (lower is better)
Translates to: LLYYGKISLPVSLLMVKVSRSIT*HCMLLG
Trigger: GCCTAAAAGCATGCAGTGCAAAGTGATACTTCTCGA...GACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CAA 90 bp TTCAGTGCATTTGCCATTTTTATTTCGCTATGCAGAAACATACATTCACCATGGAATGGTGCTTTCAAATaGTTCAAACTCTCCCGGCCG +
Preference number: 5 (lower is better)
Translates to: FSAFAIFISLCRNIHSPWNGAFK*FKLSRP
Trigger: CGGCCGGGAGAGTTTGAACAATTTGAAAGCACCATT...CCATGGTGAATGTATGTTTCTGCATAGCGAAATAAAAATGGCAAATGCACTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000544123.5
CDS-3UTR CAA 90 bp ATTGCTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTAATGGTGCTTTCAAATaGTTCAAACTCTCCCGGCCG +
Preference number: 5 (lower is better)
Translates to: IALLWEDLSASVFINGQGNGAFK*FKLSRP
Trigger: CGGCCGGGAGAGTTTGAACAATTTGAAAGCACCATT...ACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAGCAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CAA 90 bp CCTATGAATTCTGTTGGTTTTCGCGCAGACTCTAATAAACTGAAGATTTCAGAGAAGGTTAGGAATTTCTaGGGAGGTGCTTCTGGTAAC +
Preference number: 5 (lower is better)
Translates to: PMNSVGFRADSNKLKISEKVRNF*GGASGN
Trigger: GTTACCAGAAGCACCTCCCAAGAAATTCCTAACCTT...CTCTGAAATCTTCAGTTTATTAGAGTCTGCGCGAAAACCAACAGAATTCATAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637651.1
CDS-3UTR CAA 90 bp CAATTCTTCTGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGACTCGCTAATGTTGGTTaGATGTTTCATCAGGTCATC +
Preference number: 5 (lower is better)
Translates to: QFFWTEIFHGQIQVSWVRLANVG*MFHQVI
Trigger: GATGACCTGATGAAACATCAAACCAACATTAGCGAG...TCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCAGAAGAATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CAA 90 bp GTGTTACATGAGACCACGGTTTATATTGTTGGTTATGAACGTGCAGGTATAGCTCTCGCTAATGTTGGTTaGATGTTTCATCAGGTCATC +
Preference number: 5 (lower is better)
Translates to: VLHETTVYIVGYERAGIALANVG*MFHQVI
Trigger: GATGACCTGATGAAACATCAAACCAACATTAGCGAG...AGCTATACCTGCACGTTCATAACCAACAATATAAACCGTGGTCTCATGTAACAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CAA 90 bp TTGCTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCTTACGGCAGTGTCTGTaGAGGTTTCTAAGAAGGTTC +
Preference number: 5 (lower is better)
Translates to: LLYYGKISLPVSLLMVKVLRQCL*RFLRRF
Trigger: GAACCTTCTTAGAAACCTCAACAGACACTGCCGTAA...GACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAGCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CAA 90 bp AAAGCAAGATTGGAAGCATTACATATTTCCAGAGGGTCAGAGAGTCATTACTGTTTACGGCAGTGTCTGTaGAGGTTTCTAAGAAGGTTC +
Preference number: 5 (lower is better)
Translates to: KARLEALHISRGSESHYCLRQCL*RFLRRF
Trigger: GAACCTTCTTAGAAACCTCAACAGACACTGCCGTAA...ACAGTAATGACTCTCTGACCCTCTGGAAATATGTAATGCTTCCAATCTTGCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000544123.5
ENST00000637651.1
CDS-3UTR CAA 90 bp CAATTCTTCTGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGACCACGGTTTATATTGTaGGTTATGAACGTGCAGGTA +
Preference number: 5 (lower is better)
Translates to: QFFWTEIFHGQIQVSWVRPRFIL*VMNVQV
Trigger: TACCTGCACGTTCATAACCAACAATATAAACCGTGG...TCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCAGAAGAATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CAA 90 bp AAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGAGGGAACTCCATATCCACGGTTTATATTGTaGGTTATGAACGTGCAGGTA +
Preference number: 5 (lower is better)
Translates to: KFSTDRYKSVGLEEGTPYPRFIL*VMNVQV
Trigger: TACCTGCACGTTCATAACCAACAATATAAACCGTGG...ATATGGAGTTCCCTCTTCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CAA 90 bp CAAAGCAAGATTGGAAGCATTACATATTTCCAGAGGGTCAGAGAGTCATTACTGCCACGGTTTATATTGTaGGTTATGAACGTGCAGGTA +
Preference number: 5 (lower is better)
Translates to: QSKIGSITYFQRVRESLLPRFIL*VMNVQV
Trigger: TACCTGCACGTTCATAACCAACAATATAAACCGTGG...CAGTAATGACTCTCTGACCCTCTGGAAATATGTAATGCTTCCAATCTTGCTTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000544123.5
ENST00000637651.1
CDS-3UTR CAA 90 bp CAATTCTTCTGGACTGAAATTTTCCACGGACAGATACAAGTCAGTTGGGTTAGAAGACCACGGTTTATATaGTTGGTTATGAACGTGCAG +
Preference number: 5 (lower is better)
Translates to: QFFWTEIFHGQIQVSWVRRPRFI*LVMNVQ
Trigger: CTGCACGTTCATAACCAACAATATAAACCGTGGTCT...TCTAACCCAACTGACTTGTATCTGTCCGTGGAAAATTTCAGTCCAGAAGAATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CAA 90 bp GAACTCCATATAGGCTCTGGTTTTCCTAACGGTTTGCATGACTGCATTCATGTGATAAACATTCACAGCTaGTTAGACAAAATCGTAGGC +
Preference number: 5 (lower is better)
Translates to: ELHIGSGFPNGLHDCIHVINIHS*LDKIVG
Trigger: GCCTACGATTTTGTCTAACAAGCTGTGAATGTTTAT...CACATGAATGCAGTCATGCAAACCGTTAGGAAAACCAGAGCCTATATGGAGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637651.1
CDS CCA 90 bp TCAAATTTGCCATTACAAATTTGGATAATCAAAGAGTGCAGGCCATaGAATAAAAGGGAACACCAGGAAGACCACACAAGCATAGAAGCA +
Preference number: 5 (lower is better)
Translates to: SNLPLQIWIIKECRP*NKREHQEDHTSIEA
Trigger: TGCTTCTATGCTTGTGTGGTCTTCCTGGTGTTCCCTTTTATTCCATGGCCTGCACTCTTTGATTATCCAAATTTGTAATGGCAAATTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578618.5
CDS-3UTR CAA 90 bp TCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATTCTTCTGGACTGAAATTTTCTCGAGAAGTATCACTTaGCACTGCATGCTTTTAGGC +
Preference number: 5 (lower is better)
Translates to: SASVFINGQGQFFWTEIFSRSIT*HCMLLG
Trigger: GCCTAAAAGCATGCAGTGCAAAGTGATACTTCTCGA...GAAAATTTCAGTCCAGAAGAATTGACCTTGACCATTAATAAAGACACTGGCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CAA 90 bp CTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATTCGAGAAGTATCACTTaGCACTGCATGCTTTTAGGC +
Preference number: 5 (lower is better)
Translates to: LYYGKISLPVSLLMVKVNSRSIT*HCMLLG
Trigger: GCCTAAAAGCATGCAGTGCAAAGTGATACTTCTCGA...ATTGACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CAA 90 bp ATTGCTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTTCGAGAAGTATCACTTaGCACTGCATGCTTTTAGGC +
Preference number: 5 (lower is better)
Translates to: IALLWEDLSASVFINGQGSRSIT*HCMLLG
Trigger: GCCTAAAAGCATGCAGTGCAAAGTGATACTTCTCGA...ACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAGCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CAA 90 bp CGTTGCTTCATGCATTATCGGTTTAGTGATGCTGAATCAGATTGCTTTATTATGTTTATCAAACAGCACTaGTCCTCTGGAGCGTTTCTC +
Preference number: 5 (lower is better)
Translates to: RCFMHYRFSDAESDCFIMFIKQH*SSGAFL
Trigger: GAGAAACGCTCCAGAGGACAAGTGCTGTTTGATAAA...CATAATAAAGCAATCTGATTCAGCATCACTAAACCGATAATGCATGAAGCAACG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CAA 90 bp CTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATTTTATCAAACAGCACTaGTCCTCTGGAGCGTTTCTC +
Preference number: 5 (lower is better)
Translates to: LYYGKISLPVSLLMVKVNFIKQH*SSGAFL
Trigger: GAGAAACGCTCCAGAGGACAAGTGCTGTTTGATAAA...ATTGACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CAA 90 bp AAAGCAAGATTGGAAGCATTACATATTTCCAGAGGGTCAGAGAGTCATTACTGTGAAATCTTTAGAACCTaGGGCCAGGCAAATCTGTTT +
Preference number: 5 (lower is better)
Translates to: KARLEALHISRGSESHYCEIFRT*GQANLF
Trigger: AAACAGATTTGCCTGGCCCAAGGTTCTAAAGATTTC...ACAGTAATGACTCTCTGACCCTCTGGAAATATGTAATGCTTCCAATCTTGCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000544123.5
ENST00000637651.1
CDS-3UTR CAA 90 bp GTTGCTTCATGCATTATCGGTTTAGTGATGCTGAATCAGATTGCTTTATTATGGAAGGTTAGGAATTTCTaGGGAGGTGCTTCTGGTAAC +
Preference number: 5 (lower is better)
Translates to: VASCIIGLVMLNQIALLWKVRNF*GGASGN
Trigger: GTTACCAGAAGCACCTCCCAAGAAATTCCTAACCTT...CCATAATAAAGCAATCTGATTCAGCATCACTAAACCGATAATGCATGAAGCAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CAA 90 bp ATTGCTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTAAGGTTAGGAATTTCTaGGGAGGTGCTTCTGGTAAC +
Preference number: 5 (lower is better)
Translates to: IALLWEDLSASVFINGQGKVRNF*GGASGN
Trigger: GTTACCAGAAGCACCTCCCAAGAAATTCCTAACCTT...ACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAGCAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CAA 90 bp AGCAAGATTGGAAGCATTACATATTTCCAGAGGGTCAGAGAGTCATTACTGTTTCTCGCTAATGTTGGTTaGATGTTTCATCAGGTCATC +
Preference number: 5 (lower is better)
Translates to: SKIGSITYFQRVRESLLFLANVG*MFHQVI
Trigger: GATGACCTGATGAAACATCAAACCAACATTAGCGAG...AAACAGTAATGACTCTCTGACCCTCTGGAAATATGTAATGCTTCCAATCTTGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000544123.5
ENST00000637651.1
CDS-3UTR CAA 90 bp GTTGCTTCATGCATTATCGGTTTAGTGATGCTGAATCAGATTGCTTTATTATGGTTTCCGTCTTCACCGTaGAGGACTCAAAATGAGGTT +
Preference number: 5 (lower is better)
Translates to: VASCIIGLVMLNQIALLWFPSSP*RTQNEV
Trigger: AACCTCATTTTGAGTCCTCAACGGTGAAGACGGAAA...CCATAATAAAGCAATCTGATTCAGCATCACTAAACCGATAATGCATGAAGCAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CAA 90 bp CTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATGGTTTTCCTAACGGTTaGCATGACTGCATTCATGTG +
Preference number: 5 (lower is better)
Translates to: LYYGKISLPVSLLMVKVNGFPNG*HDCIHV
Trigger: CACATGAATGCAGTCATGCAAACCGTTAGGAAAACC...ATTGACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CAA 90 bp TCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATTCTTCTGGACTGAAATTTTCGGTTTTCCTAACGGTTaGCATGACTGCATTCATGTG +
Preference number: 5 (lower is better)
Translates to: SASVFINGQGQFFWTEIFGFPNG*HDCIHV
Trigger: CACATGAATGCAGTCATGCAAACCGTTAGGAAAACC...GAAAATTTCAGTCCAGAAGAATTGACCTTGACCATTAATAAAGACACTGGCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CAA 90 bp GGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATTCTTCTGGACAATTCTTCGAAGCTTaGCATTTTAATAGTGCCAGA +
Preference number: 5 (lower is better)
Translates to: GKISLPVSLLMVKVNSSGQFFEA*HFNSAR
Trigger: TCTGGCACTATTAAAATGCAAAGCTTCGAAGAATTG...TCCAGAAGAATTGACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400111.8
ENST00000637651.1
CDS-3UTR CAA 90 bp GTGTTACATGAGACCACGGTTTATATTGTTGGTTATGAACGTGCAGGTATAGCTGAGAAAGGAGTCTCATaGATTGATCAGGCAAAGTTT +
Preference number: 5 (lower is better)
Translates to: VLHETTVYIVGYERAGIAEKGVS*IDQAKF
Trigger: AAACTTTGCCTGATCAATCAATGAGACTCCTTTCTC...AGCTATACCTGCACGTTCATAACCAACAATATAAACCGTGGTCTCATGTAACAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544123.5
CDS-3UTR CAA 90 bp GGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATTCTTCTGGAGTTTTAATGCTGACTTaGCACTGCGGTATTGATTTA +
Preference number: 5 (lower is better)
Translates to: GKISLPVSLLMVKVNSSGVLMLT*HCGIDL
Trigger: TAAATCAATACCGCAGTGCAAAGTCAGCATTAAAAC...TCCAGAAGAATTGACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637651.1
CDS-3UTR CAA 90 bp CGTTGCTTCATGCATTATCGGTTTAGTGATGCTGAATCAGATTGCTTTATTATGGAAATCTTTAGAACCTaGGGCCAGGCAAATCTGTTT +
Preference number: 5 (lower is better)
Translates to: RCFMHYRFSDAESDCFIMEIFRT*GQANLF
Trigger: AAACAGATTTGCCTGGCCCAAGGTTCTAAAGATTTC...CATAATAAAGCAATCTGATTCAGCATCACTAAACCGATAATGCATGAAGCAACG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CAA 90 bp CTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATGAAATCTTTAGAACCTaGGGCCAGGCAAATCTGTTT +
Preference number: 5 (lower is better)
Translates to: LYYGKISLPVSLLMVKVNEIFRT*GQANLF
Trigger: AAACAGATTTGCCTGGCCCAAGGTTCTAAAGATTTC...ATTGACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CAA 90 bp TCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATTCTTCTGGACTGAAATTTTCCCACGGTTTATATTGTaGGTTATGAACGTGCAGGTA +
Preference number: 5 (lower is better)
Translates to: SASVFINGQGQFFWTEIFPRFIL*VMNVQV
Trigger: TACCTGCACGTTCATAACCAACAATATAAACCGTGG...GAAAATTTCAGTCCAGAAGAATTGACCTTGACCATTAATAAAGACACTGGCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CAA 90 bp TCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATTCTTCTGGACTGAAATTTTCAGACCACGGTTTATATaGTTGGTTATGAACGTGCAG +
Preference number: 5 (lower is better)
Translates to: SASVFINGQGQFFWTEIFRPRFI*LVMNVQ
Trigger: CTGCACGTTCATAACCAACAATATAAACCGTGGTCT...GAAAATTTCAGTCCAGAAGAATTGACCTTGACCATTAATAAAGACACTGGCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CAA 90 bp GTTGCTTCATGCATTATCGGTTTAGTGATGCTGAATCAGATTGCTTTATTATGGAGACCACGGTTTATATaGTTGGTTATGAACGTGCAG +
Preference number: 5 (lower is better)
Translates to: VASCIIGLVMLNQIALLWRPRFI*LVMNVQ
Trigger: CTGCACGTTCATAACCAACAATATAAACCGTGGTCT...CCATAATAAAGCAATCTGATTCAGCATCACTAAACCGATAATGCATGAAGCAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000637651.1
CDS-3UTR CAA 90 bp CAAAGCAAGATTGGAAGCATTACATATTTCCAGAGGGTCAGAGAGTCATTACTGCAATTCTTCGAAGCTTaGCATTTTAATAGTGCCAGA +
Preference number: 5 (lower is better)
Translates to: QSKIGSITYFQRVRESLLQFFEA*HFNSAR
Trigger: TCTGGCACTATTAAAATGCAAAGCTTCGAAGAATTG...CAGTAATGACTCTCTGACCCTCTGGAAATATGTAATGCTTCCAATCTTGCTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400111.8
ENST00000637651.1
CDS-3UTR CAA 90 bp GAGGTGGAGACTTATGAGCTAGATCTATATCCACAATTTACAAATGAGGTACAACCAACAGGTTTTTCTTaGTTTCTCTGCCAGGGTATT +
Preference number: 5 (lower is better)
Translates to: EVETYELDLYPQFTNEVQPTGFS*FLCQGI
Trigger: AATACCCTGGCAGAGAAACAAAGAAAAACCTGTTGG...TTGTACCTCATTTGTAAATTGTGGATATAGATCTAGCTCATAAGTCTCCACCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579951.2
CDS-3UTR CAA 90 bp CCTATGAATTCTGTTGGTTTTCGCGCAGACTCTAATAAACTGAAGATTTCAGAGAAGGAATCTCAGAGTTaGGAAACGAAAAGAATGGGA +
Preference number: 5 (lower is better)
Translates to: PMNSVGFRADSNKLKISEKESQS*ETKRMG
Trigger: TCCCATTCTTTTCGTTTCCAAACTCTGAGATTCCTT...CTCTGAAATCTTCAGTTTATTAGAGTCTGCGCGAAAACCAACAGAATTCATAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637651.1
CDS GCA 90 bp AGGGACCTTCATGAGAGCATGACCTTCCTGTATTTCCTATATGAGTaGTTTAAAATTCGTGAAATGCTCATGTCTTGGAATTTCATCTAT +
Preference number: 5 (lower is better)
Translates to: RDLHESMTFLYFLYE*FKIREMLMSWNFIY
Trigger: ATAGATGAAATTCCAAGACATGAGCATTTCACGAATTTTAAAGCACTCATATAGGAAATACAGGAAGGTCATGCTCTCATGAAGGTCCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578395.1
CDS-3UTR CAA 90 bp CTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATGAATGGAGCGCTTCCTaGCTGCAAAAATATAACTTT +
Preference number: 5 (lower is better)
Translates to: LYYGKISLPVSLLMVKVNEWSAS*LQKYNF
Trigger: AAAGTTATATTTTTGCAGCAAGGAAGCGCTCCATTC...ATTGACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400111.8
ENST00000637651.1
CDS-3UTR CAA 90 bp GTTGCTTCATGCATTATCGGTTTAGTGATGCTGAATCAGATTGCTTTATTATGGGAATGGAGCGCTTCCTaGCTGCAAAAATATAACTTT +
Preference number: 5 (lower is better)
Translates to: VASCIIGLVMLNQIALLWEWSAS*LQKYNF
Trigger: AAAGTTATATTTTTGCAGCAAGGAAGCGCTCCATTC...CCATAATAAAGCAATCTGATTCAGCATCACTAAACCGATAATGCATGAAGCAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400111.8
ENST00000637651.1
CDS-3UTR CAA 90 bp TTCAGTGCATTTGCCATTTTTATTTCGCTATGCAGAAACATACATTCACCATGGGAGCTTTCAGTGCATTaGCCATTTTTATTTCGCTAT +
Preference number: 5 (lower is better)
Translates to: FSAFAIFISLCRNIHSPWELSVH*PFLFRY
Trigger: ATAGCGAAATAAAAATGGCAAATGCACTGAAAGCTC...CCATGGTGAATGTATGTTTCTGCATAGCGAAATAAAAATGGCAAATGCACTGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342933.7
ENST00000544123.5
CDS-3UTR CAA 90 bp CTTTATTATGGGAAGATCTCTCTGCCAGTGTCTTTATTAATGGTCAAGGTCAATGAGCTTTCAGTGCATTaGCCATTTTTATTTCGCTAT +
Preference number: 5 (lower is better)
Translates to: LYYGKISLPVSLLMVKVNELSVH*PFLFRY
Trigger: ATAGCGAAATAAAAATGGCAAATGCACTGAAAGCTC...ATTGACCTTGACCATTAATAAAGACACTGGCAGAGAGATCTTCCCATAATAAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342933.7
ENST00000544123.5
CDS TCA 72 bp TCCAAGTTGCCACCTGCAGCGCGCTTCGGGCGCCTGTaGCAGCCCGCGCCGCTCAGCCCTCGCGGGCCCGCC +
Preference number: 6 (lower is better)
Translates to: SKLPPAARFGRL*QPAPLSPRGPA
Trigger: GGCGGGCCCGCGAGGGCTGAGCGGCGCGGGCTGTCACAGGCGCCCGAAGCGCGCTGCAGGTGGCAACTTGGA
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578431.1
CDS GCA 72 bp TGCGCTGCAGCGGCGGCGAACTGCTCCAGGGCCTGCTaGTGCTCCTCCTTGGGCGGCTCCGGCACGGGCGCC +
Preference number: 6 (lower is better)
Translates to: CAAAAANCSRAC*CSSLGGSGTGA
Trigger: GGCGCCCGTGCCGGAGCCGCCCAAGGAGGAGCAGCAGCAGGCCCTGGAGCAGTTCGCCGCCGCTGCAGCGCA
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000578431.1
ENST00000578503.5
ENST00000580179.2
ENST00000580308.5
ENST00000580989.5
ENST00000581833.5
ENST00000582592.1
ENST00000582703.5
ENST00000584015.5
ENST00000584651.5
ENST00000585142.5
ENST00000637651.1
CDS GCA 72 bp CGCCCAGAGACCGTGCGAGGAAAGCCAACCTCGTCCTaGCTGCCCTCCCAGCCGCGGGGGAGGGGGCCACCG +
Preference number: 6 (lower is better)
Translates to: RPETVRGKPTSS*LPSQPRGRGPP
Trigger: CGGTGGCCCCCTCCCCCGCGGCTGGGAGGGCAGGCAGGACGAGGTTGGCTTTCCTCGCACGGTCTCTGGGCG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342933.7
ENST00000540638.6
CDS GCA 72 bp CGCGGAGCTGCGGCGGGGGCCCACGCCCAGAGACCGTaGGAGGAAAGCCAACCTCGTCCTGCCTGCCCTCCC +
Preference number: 6 (lower is better)
Translates to: RGAAAGAHAQRP*EESQPRPACPP
Trigger: GGGAGGGCAGGCAGGACGAGGTTGGCTTTCCTCGCACGGTCTCTGGGCGTGGGCCCCCGCCGCAGCTCCGCG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342933.7
ENST00000540638.6
CDS GCA 72 bp CCCCCTGTTGCAGGAGACACCGAGGCTCCGCGGAGCTaGGGCGGGGGCCCACGCCCAGAGACCGTGCGAGGA +
Preference number: 6 (lower is better)
Translates to: PPVAGDTEAPRS*GGGPRPETVRG
Trigger: TCCTCGCACGGTCTCTGGGCGTGGGCCCCCGCCGCAGCTCCGCGGAGCCTCGGTGTCTCCTGCAACAGGGGG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342933.7
ENST00000540638.6
CDS GCA 72 bp CTGTGCGCTGCAGCGGCGGCGAACTGCTCCAGGGCCTaGTGCTGCTCCTCCTTGGGCGGCTCCGGCACGGGC +
Preference number: 6 (lower is better)
Translates to: LCAAAAANCSRA*CCSSLGGSGTG
Trigger: GCCCGTGCCGGAGCCGCCCAAGGAGGAGCAGCAGCAGGCCCTGGAGCAGTTCGCCGCCGCTGCAGCGCACAG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000544123.5
ENST00000545076.5
ENST00000578431.1
ENST00000578503.5
ENST00000580179.2
ENST00000580308.5
ENST00000580989.5
ENST00000581833.5
ENST00000582592.1
ENST00000582703.5
ENST00000584015.5
ENST00000584651.5
ENST00000585142.5
ENST00000637651.1
CDS GCA 72 bp CCGCAGCTGCGGTGGCGGCACCTCCAAGTTGCCACCTaGAGCGCGCTTCGGGCGCCTGTGACAGCCCGCGCC +
Preference number: 6 (lower is better)
Translates to: PQLRWRHLQVAT*SALRAPVTARA
Trigger: GGCGCGGGCTGTCACAGGCGCCCGAAGCGCGCTGCAGGTGGCAACTTGGAGGTGCCGCCACCGCAGCTGCGG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578431.1
CDS CCA 72 bp GGTCCAGTCTCGGGCTCGGCGGCGGGAAAGAGCTCCTaGAGGCTGGAAGGGGCCGCCAGACCCGGGCTCCTC +
Preference number: 6 (lower is better)
Translates to: GPVSGSAAGKSS*RLEGAARPGLL
Trigger: GAGGAGCCCGGGTCTGGCGGCCCCTTCCAGCCTCCAGGAGCTCTTTCCCGCCGCCGAGCCCGAGACTGGACC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578431.1
ENST00000637651.1
CDS GCA 72 bp CAGAGACCGTGCGAGGAAAGCCAACCTCGTCCTGCCTaGCCTCCCAGCCGCGGGGGAGGGGGCCACCGCAGT +
Preference number: 6 (lower is better)
Translates to: QRPCEESQPRPA*PPSRGGGGHRS
Trigger: ACTGCGGTGGCCCCCTCCCCCGCGGCTGGGAGGGCAGGCAGGACGAGGTTGGCTTTCCTCGCACGGTCTCTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000342933.7
ENST00000540638.6
CDS GCA 72 bp GCTCCTCCCGCAGCTGCGGTGGCGGCACCTCCAAGTTaGCACCTGCAGCGCGCTTCGGGCGCCTGTGACAGC +
Preference number: 6 (lower is better)
Translates to: APPAAAVAAPPS*HLQRASGACDS
Trigger: GCTGTCACAGGCGCCCGAAGCGCGCTGCAGGTGGCAACTTGGAGGTGCCGCCACCGCAGCTGCGGGAGGAGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578431.1
CDS GCA 72 bp CAGTGGCAGTGGTCTCCCCGTCGGCTGCGGTGTCCGTaGGCTCACTGTCAGTCTTTCCCTCGTGCCGGATGG +
Preference number: 6 (lower is better)
Translates to: QWQWSPRRLRCP*AHCQSFPRAGW
Trigger: CCATCCGGCACGAGGGAAAGACTGACAGTGAGCGCACGGACACCGCAGCCGACGGGGAGACCACTGCCACTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000542652.6
ENST00000544123.5
ENST00000545076.5
ENST00000578196.5
ENST00000578395.1
ENST00000578524.5
ENST00000579271.5
ENST00000580316.5
ENST00000580647.5
ENST00000581387.5
ENST00000637651.1
CDS GCA 72 bp CTGGTCCGACTCAGTGGCAGTGGTCTCCCCGTCGGCTaGGGTGTCCGTGCGCTCACTGTCAGTCTTTCCCTC +
Preference number: 6 (lower is better)
Translates to: LVRLSGSGLPVG*GVRALTVSLSL
Trigger: GAGGGAAAGACTGACAGTGAGCGCACGGACACCGCAGCCGACGGGGAGACCACTGCCACTGAGTCGGACCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000342933.7
ENST00000400111.8
ENST00000544123.5
ENST00000580316.5
ENST00000637651.1
CDS GCA 72 bp TCAGGGACAAGTGGTTCGATCATGGGGGCATCCTCCTaGCTGGCGGCCAGTCGCACGGGGGAGGTGGAAAGC +
Preference number: 6 (lower is better)
Translates to: SGTSGSIMGASS*LAASRTGEVES
Trigger: GCTTTCCACCTCCCCCGTGCGACTGGCCGCCAGGCAGGAGGATGCCCCCATGATCGAACCACTTGTCCCTGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 17 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000542652.6
ENST00000544123.5
ENST00000545076.5
ENST00000578196.5
ENST00000578524.5
ENST00000579271.5
ENST00000580316.5
ENST00000580647.5
ENST00000581292.5
ENST00000581387.5
ENST00000582729.5
ENST00000584055.1
ENST00000637651.1
CDS GCA 72 bp CTGGTCCGACTCAGTGGCAGTGGTCTCCCCGTCGGCTaGGGTGTCCGTGCGCTCACTGTCAGTCTCTTCCTC +
Preference number: 6 (lower is better)
Translates to: LVRLSGSGLPVG*GVRALTVSLFL
Trigger: GAGGAAGAGACTGACAGTGAGCGCACGGACACCGCAGCCGACGGGGAGACCACTGCCACTGAGTCGGACCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341928.7
ENST00000582729.5
CDS CCA 72 bp GGACAAGTGGTTCGATCATGGGGGCATCCTCCTGCCTaGCGGCCAGTCGCACGGGGGAGGTGGAAAGCCTCT +
Preference number: 6 (lower is better)
Translates to: GQVVRSWGHPPA*RPVARGRWKAS
Trigger: AGAGGCTTTCCACCTCCCCCGTGCGACTGGCCGCCAGGCAGGAGGATGCCCCCATGATCGAACCACTTGTCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 17 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000542652.6
ENST00000544123.5
ENST00000545076.5
ENST00000578196.5
ENST00000578524.5
ENST00000579271.5
ENST00000580316.5
ENST00000580647.5
ENST00000581292.5
ENST00000581387.5
ENST00000582729.5
ENST00000584055.1
ENST00000637651.1
CDS CCA 72 bp CGTCCTGGCGCAGGGTCAGGCTCCGCGGACGACGCCTaGAGACAGCTGCCAATGCCAATAGCTTTAGCCCTT +
Preference number: 6 (lower is better)
Translates to: RPGAGSGSADDA*RQLPMPIALAL
Trigger: AAGGGCTAAAGCTATTGGCATTGGCAGCTGTCTCCAGGCGTCGTCCGCGGAGCCTGACCCTGCGCCAGGACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342933.7
ENST00000540638.6
CDS CAA 72 bp GTCACCGAAGCCTTCCTTTGGGGCCCCTCCCGGAGCTaGTTCGCAGCCCGCAGGCACAACCTTCCTTGGAGA +
Preference number: 6 (lower is better)
Translates to: VTEAFLWGPSRS*FAARRHNLPWR
Trigger: TCTCCAAGGAAGGTTGTGCCTGCGGGCTGCGAACAAGCTCCGGGAGGGGCCCCAAAGGAAGGCTTCGGTGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578431.1
ENST00000637651.1
CDS CAA 90 bp TGCCGGATGGCCGAGATGGGCGTGACTTCTTCCCCCTTCCTCCGTTaGTCCTCTTCCTCGTCCCGCTCCTCCTCAGCCTTCTTCTCCGGA +
Preference number: 6 (lower is better)
Translates to: CRMAEMGVTSSPFLR*SSSSSRSSSAFFSG
Trigger: TCCGGAGAAGAAGGCTGAGGAGGAGCGGGACGAGGAAGAGGACAAACGGAGGAAGGGGGAAGAAGTCACGCCCATCTCGGCCATCCGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000542652.6
ENST00000544123.5
ENST00000545076.5
ENST00000578196.5
ENST00000578395.1
ENST00000578524.5
ENST00000580316.5
ENST00000581387.5
ENST00000637651.1
CDS GCA 72 bp CAGTGGCAGTGGTCTCCCCGTCGGCTGCGGTGTCCGTaGGCTCACTGTCAGTCTCTTCCTCTGAACTGTCAC +
Preference number: 6 (lower is better)
Translates to: QWQWSPRRLRCP*AHCQSLPLNCH
Trigger: GTGACAGTTCAGAGGAAGAGACTGACAGTGAGCGCACGGACACCGCAGCCGACGGGGAGACCACTGCCACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341928.7
ENST00000582729.5
CDS CCA 72 bp CATCCTCCTGCCTGGCGGCCAGTCGCACGGGGGAGGTaGAAAGCCTCTTCTCCCATTCATTCGTTACGGCAG +
Preference number: 6 (lower is better)
Translates to: HPPAWRPVARGR*KASSPIHSLRQ
Trigger: CTGCCGTAACGAATGAATGGGAGAAGAGGCTTTCCACCTCCCCCGTGCGACTGGCCGCCAGGCAGGAGGATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 17 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000542652.6
ENST00000544123.5
ENST00000545076.5
ENST00000578196.5
ENST00000578524.5
ENST00000579271.5
ENST00000580316.5
ENST00000580647.5
ENST00000581292.5
ENST00000581387.5
ENST00000582729.5
ENST00000584055.1
ENST00000637651.1
CDS CCA 72 bp TCACACTTGGCTCTTCAGGGACAAGTGGTTCGATCATaGGGGCATCCTCCTGCCTGGCGGCCAGTCGCACGG +
Preference number: 6 (lower is better)
Translates to: SHLALQGQVVRS*GHPPAWRPVAR
Trigger: CCGTGCGACTGGCCGCCAGGCAGGAGGATGCCCCCATGATCGAACCACTTGTCCCTGAAGAGCCAAGTGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579271.5
CDS TCA 72 bp GCTCCTTTCCCTCGTGCCGGATGGCCGAGATGGGCGTaGCTTCTTCCCCCTTCCTCCGTTTGTCCTCTTCCT +
Preference number: 6 (lower is better)
Translates to: APFPRAGWPRWA*LLPPSSVCPLP
Trigger: AGGAAGAGGACAAACGGAGGAAGGGGGAAGAAGTCACGCCCATCTCGGCCATCCGGCACGAGGGAAAGGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581292.5
CDS CCA 72 bp CTTCTTTGGTCTCTTCAGGGACAAGTGGTTCGATCATaGGGGCATCCTCCTGCCTGGCGGCCAGTCGCACGG +
Preference number: 6 (lower is better)
Translates to: LLWSLQGQVVRS*GHPPAWRPVAR
Trigger: CCGTGCGACTGGCCGCCAGGCAGGAGGATGCCCCCATGATCGAACCACTTGTCCCTGAAGAGACCAAAGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000400111.8
ENST00000578196.5
ENST00000581387.5
ENST00000582729.5
ENST00000637651.1
CDS CCA 72 bp TGGAGCAGCTCAGCAAACACTGCGTCATTAGTTTTCTaGCCTGGGCTCACCTCCCTCCGCACCGGGGTGCTG +
Preference number: 6 (lower is better)
Translates to: WSSSANTASLVF*PGLTSLRTGVL
Trigger: CAGCACCCCGGTGCGGAGGGAGGTGAGCCCAGGCCAGAAAACTAATGACGCAGTGTTTGCTGAGCTGCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580866.2
CDS TCA 72 bp CAGTCTTTCCCTCGTGCCGGATGGCCGAGATGGGCGTaGCTTCTTCCCCCTTCCTCCGTTTGTCCTCTTCCT +
Preference number: 6 (lower is better)
Translates to: QSFPRAGWPRWA*LLPPSSVCPLP
Trigger: AGGAAGAGGACAAACGGAGGAAGGGGGAAGAAGTCACGCCCATCTCGGCCATCCGGCACGAGGGAAAGACTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000542652.6
ENST00000544123.5
ENST00000545076.5
ENST00000578196.5
ENST00000578395.1
ENST00000578524.5
ENST00000579271.5
ENST00000580316.5
ENST00000580647.5
ENST00000581387.5
ENST00000637651.1
CDS TCA 72 bp GTGACTTTCCCTCGTGCCGGATGGCCGAGATGGGCGTaGCTTCTTCCCCCTTCCTCCGTTTGTCCTCTTCCT +
Preference number: 6 (lower is better)
Translates to: VTFPRAGWPRWA*LLPPSSVCPLP
Trigger: AGGAAGAGGACAAACGGAGGAAGGGGGAAGAAGTCACGCCCATCTCGGCCATCCGGCACGAGGGAAAGTCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000341928.7
CDS CAA 72 bp TGGATTCCGAGTCTGATCCAGATTCGGTCGTCATGGTaGATTGTTCTTATCGGCCCCGCGCTGCGCCCGCCC +
Preference number: 6 (lower is better)
Translates to: WIPSLIQIRSSW*IVLIGPALRPP
Trigger: GGGCGGGCGCAGCGCGGGGCCGATAAGAACAATCAACCATGACGACCGAATCTGGATCAGACTCGGAATCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584015.5
CDS CCA 72 bp TTCCCCAGAAGACTGCTTAGTCTCTTCAGGGACAAGTaGTTCGATCATGGGGGCATCCTCCTGCCTGGCGGC +
Preference number: 6 (lower is better)
Translates to: FPRRLLSLFRDK*FDHGGILLPGG
Trigger: GCCGCCAGGCAGGAGGATGCCCCCATGATCGAACCACTTGTCCCTGAAGAGACTAAGCAGTCTTCTGGGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000544123.5
ENST00000578524.5
ENST00000580316.5
CDS CCA 72 bp TGCAGTCATTCTCCTTACACCTCCTACGGAGCTCTGTaGGAGATGTGGGGGCACAATGGGTGGATGGGGGTG +
Preference number: 6 (lower is better)
Translates to: CSHSPYTSYGAL*EMWGHNGWMGV
Trigger: CACCCCCATCCACCCATTGTGCCCCCACATCTCCCACAGAGCTCCGTAGGAGGTGTAAGGAGAATGACTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000341928.7
CDS CCA 72 bp AGTCCAAGGCGGGCTCTCCAGGCAGGTGCTCAGCTCTaGACGGCTCATAACCTGGCAGTTTGCAGTCATTCT +
Preference number: 6 (lower is better)
Translates to: SPRRALQAGAQL*TAHNLAVCSHS
Trigger: AGAATGACTGCAAACTGCCAGGTTATGAGCCGTCCAGAGCTGAGCACCTGCCTGGAGAGCCCGCCTTGGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341928.7
CDS CCA 72 bp TTTCCATTTTCTCTTCAGGGACAAGTGGTTCGATCATaGGGGCATCCTCCTGCCTGGCGGCCAGTCGCACGG +
Preference number: 6 (lower is better)
Translates to: FPFSLQGQVVRS*GHPPAWRPVAR
Trigger: CCGTGCGACTGGCCGCCAGGCAGGAGGATGCCCCCATGATCGAACCACTTGTCCCTGAAGAGAAAATGGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000540638.6
ENST00000542652.6
ENST00000545076.5
ENST00000581292.5
ENST00000584055.1
CDS CCA 72 bp GCTTGGATTCCGAGTCTGATCCAGATTCGGTCGTCATaGTTGATTGTTCTTATCGGCCCCGCGCTGCGCCCG +
Preference number: 6 (lower is better)
Translates to: AWIPSLIQIRSS*LIVLIGPALRP
Trigger: CGGGCGCAGCGCGGGGCCGATAAGAACAATCAACCATGACGACCGAATCTGGATCAGACTCGGAATCCAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584015.5
CDS CCA 72 bp GCTTGGATTCCGAGTCTGATCCAGATTCGGTCGTCATaGTTGATTGTTCTGGGATCAGCAGGGAGCCCGGGC +
Preference number: 6 (lower is better)
Translates to: AWIPSLIQIRSS*LIVLGSAGSPG
Trigger: GCCCGGGCTCCCTGCTGATCCCAGAACAATCAACCATGACGACCGAATCTGGATCAGACTCGGAATCCAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
CDS CCA 72 bp TTCTTTGGTCTGACTACTGACCTCTTCAGGGACAAGTaGTTCGATCATGGGGGCATCCTCCTGCCTGGCGGC +
Preference number: 6 (lower is better)
Translates to: FFGLTTDLFRDK*FDHGGILLPGG
Trigger: GCCGCCAGGCAGGAGGATGCCCCCATGATCGAACCACTTGTCCCTGAAGAGGTCAGTAGTCAGACCAAAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000580647.5
CDS GCA 72 bp GGTGCTCAGCTCTGGACGGCTCATAACCTGGCAGTTTaGAGTCATTCTCCTTACACCTCCTACGGAGCTCTG +
Preference number: 6 (lower is better)
Translates to: GAQLWTAHNLAV*SHSPYTSYGAL
Trigger: CAGAGCTCCGTAGGAGGTGTAAGGAGAATGACTGCAAACTGCCAGGTTATGAGCCGTCCAGAGCTGAGCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341928.7
CDS CCA 72 bp TCCAGGCAGGTGCTCAGCTCTGGACGGCTCATAACCTaGCAGTTTGCAGTCATTCTCCTTACACCTCCTACG +
Preference number: 6 (lower is better)
Translates to: SRQVLSSGRLIT*QFAVILLTPPT
Trigger: CGTAGGAGGTGTAAGGAGAATGACTGCAAACTGCCAGGTTATGAGCCGTCCAGAGCTGAGCACCTGCCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341928.7
CDS CCA 72 bp GCAGGTGGTGCACGGTGGGTTCCGTCTCTATTCCACTaGACTCCGTCTTGGTTTCCATTTTCTCTTCAGGGA +
Preference number: 6 (lower is better)
Translates to: AGGARWVPSLFH*TPSWFPFSLQG
Trigger: TCCCTGAAGAGAAAATGGAAACCAAGACGGAGTCCAGTGGAATAGAGACGGAACCCACCGTGCACCACCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000540638.6
ENST00000542652.6
ENST00000545076.5
ENST00000581292.5
ENST00000584055.1
CDS CCA 72 bp CATTTTCTTTATCACACTTGGCTCTTCAGGGACAAGTaGTTCGATCATGGGGGCATCCTCCTGCCTGGCGGC +
Preference number: 6 (lower is better)
Translates to: HFLYHTWLFRDK*FDHGGILLPGG
Trigger: GCCGCCAGGCAGGAGGATGCCCCCATGATCGAACCACTTGTCCCTGAAGAGCCAAGTGTGATAAAGAAAATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579271.5
CDS GCA 72 bp TCCCCACTCATTCCACAGCCTCAGGGGATCTGTCCTTaGCTGTGGCATCCCGTTCTATGCGAATCCTTTAAA +
Preference number: 6 (lower is better)
Translates to: SPLIPQPQGICP*LWHPVLCESFK
Trigger: TTTAAAGGATTCGCATAGAACGGGATGCCACAGGCAAGGACAGATCCCCTGAGGCTGTGGAATGAGTGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545076.5
CDS CAA 72 bp GATGGTCTGGTTTTGCCTGCCCCACCCTTGTTTCCTTaGAGCCATAGTGATGTCACAACACCAGGCAGGACA +
Preference number: 6 (lower is better)
Translates to: DGLVLPAPPLFP*SHSDVTTPGRT
Trigger: TGTCCTGCCTGGTGTTGTGACATCACTATGGCTCAAAGGAAACAAGGGTGGGGCAGGCAAAACCAGACCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544123.5
ENST00000585142.5
CDS CAA 90 bp AGCCAGCAAGATGCTTCAGATGGTCTGGTTTTGCCTGCCCCACCCTaGTTTCCTTTGAGCCATAGTGATGTCACAACACCAGGCAGGACA +
Preference number: 6 (lower is better)
Translates to: SQQDASDGLVLPAPP*FPLSHSDVTTPGRT
Trigger: TGTCCTGCCTGGTGTTGTGACATCACTATGGCTCAAAGGAAACAAGGGTGGGGCAGGCAAAACCAGACCATCTGAAGCATCTTGCTGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544123.5
ENST00000585142.5
CDS CAA 90 bp GGTCCGGCTTGGATTCCGAGTCTGATCCAGATTCGGTCGTCATGGTaGATTGTTCTGTGCAATAGAAGCTCCAGAACAGCAGGGGTTTGT +
Preference number: 6 (lower is better)
Translates to: GPAWIPSLIQIRSSW*IVLCNRSSRTAGVC
Trigger: ACAAACCCCTGCTGTTCTGGAGCTTCTATTGCACAGAACAATCAACCATGACGACCGAATCTGGATCAGACTCGGAATCCAAGCCGGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580179.2
CDS TCA 72 bp CCCAGAAGACTGCTTAGTCACTACTCGGGAGGCGGATaGCTCAGTAACGTAATGGGCAGTAGCAACGGTAAA +
Preference number: 6 (lower is better)
Translates to: PRRLLSHYSGGG*LSNVMGSSNGK
Trigger: TTTACCGTTGCTACTGCCCATTACGTTACTGAGTCATCCGCCTCCCGAGTAGTGACTAAGCAGTCTTCTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400111.8
CDS TCA 72 bp GCATTCAAAGCCCTCTCAGAAACGCTCATGGCCCCATaGGATCTTGCATGGCAGGTGACTATGCATGACAAG +
Preference number: 6 (lower is better)
Translates to: AFKALSETLMAP*DLAWQVTMHDK
Trigger: CTTGTCATGCATAGTCACCTGCCATGCAAGATCTCATGGGGCCATGAGCGTTTCTGAGAGGGCTTTGAATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578618.5
CDS GCA 72 bp CCTCTCCATCCAAGCTGCGAGACATGGTATAACGTTTaGTGGATGAGCGTTCAAAGTAAGGTGCTGGGCGAT +
Preference number: 6 (lower is better)
Translates to: PLHPSCETWYNV*WMSVQSKVLGD
Trigger: ATCGCCCAGCACCTTACTTTGAACGCTCATCCAGCAAACGTTATACCATGTCTCGCAGCTTGGATGGAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000341928.7
CDS CCA 72 bp GTTCAAAGTAAGGTGCTGGGCGATCTATCAACGCACTaGCTCTTCTCGTTTGCGCTTGTGTCCTGCCACTAT +
Preference number: 6 (lower is better)
Translates to: VQSKVLGDLSTH*LFSFALVSCHY
Trigger: ATAGTGGCAGGACACAAGCGCAAACGAGAAGAGCCAGTGCGTTGATAGATCGCCCAGCACCTTACTTTGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000542652.6
ENST00000544123.5
ENST00000545076.5
ENST00000584670.1
ENST00000637651.1
CDS CCA 72 bp CTCATTCCACAGCCTCAGGGGATCTGTCCTTGCCTGTaGCATCCCGTTCTATGCGAATCCTTTAAAACCCAA +
Preference number: 6 (lower is better)
Translates to: LIPQPQGICPCL*HPVLCESFKTQ
Trigger: TTGGGTTTTAAAGGATTCGCATAGAACGGGATGCCACAGGCAAGGACAGATCCCCTGAGGCTGTGGAATGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545076.5
CDS CAA 72 bp ACGGTGGGTTCCGTCTCTATTCCACTGGACTCCGTCTaGGTTTCCATTTTCTCTTCAGGGACAAGTGGTTCG +
Preference number: 6 (lower is better)
Translates to: TVGSVSIPLDSV*VSIFSSGTSGS
Trigger: CGAACCACTTGTCCCTGAAGAGAAAATGGAAACCAAGACGGAGTCCAGTGGAATAGAGACGGAACCCACCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000540638.6
ENST00000542652.6
ENST00000545076.5
ENST00000581292.5
ENST00000584055.1
CDS CAA 90 bp GATGCTTCAGATGGTCTGGTTTTGCCTGCCCCACCCTTGTTTCCTTaGAGCCATAGTGATGTCACAACACCAGGCAGGACAATGACTTCA +
Preference number: 6 (lower is better)
Translates to: DASDGLVLPAPPLFP*SHSDVTTPGRTMTS
Trigger: TGAAGTCATTGTCCTGCCTGGTGTTGTGACATCACTATGGCTCAAAGGAAACAAGGGTGGGGCAGGCAAAACCAGACCATCTGAAGCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544123.5
ENST00000585142.5
CDS GCA 72 bp TCAACGCACTGGCTCTTCTCGTTTGCGCTTGTGTCCTaGCACTATAACGAAACTTGGAACCCAAGGTTAGGA +
Preference number: 6 (lower is better)
Translates to: STHWLFSFALVS*HYNETWNPRLG
Trigger: TCCTAACCTTGGGTTCCAAGTTTCGTTATAGTGGCAGGACACAAGCGCAAACGAGAAGAGCCAGTGCGTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000542652.6
ENST00000544123.5
ENST00000545076.5
ENST00000584670.1
ENST00000637651.1
CDS GCA 72 bp ATGCTCCATCCAAGCTGCGAGACATGGTATAACGTTTaGTGGATGAGCGTTCAAAGTAAGGTGCTGGGCGAT +
Preference number: 6 (lower is better)
Translates to: MLHPSCETWYNV*WMSVQSKVLGD
Trigger: ATCGCCCAGCACCTTACTTTGAACGCTCATCCAGCAAACGTTATACCATGTCTCGCAGCTTGGATGGAGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000542652.6
ENST00000544123.5
ENST00000545076.5
ENST00000584670.1
ENST00000637651.1
CDS GCA 72 bp TTCGTGAAAGGCTCAAGAGAACCACAGAGAGGGAGATaGTACCAAACCCCATCCTATTCCACACACTGGACA +
Preference number: 6 (lower is better)
Translates to: FVKGSREPQRGR*YQTPSYSTHWT
Trigger: TGTCCAGTGTGTGGAATAGGATGGGGTTTGGTAGCATCTCCCTCTCTGTGGTTCTCTTGAGCCTTTCACGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580308.5
CDS CCA 72 bp CTCCATCCAAGCTGCGAGACATGGTATAACGTTTGCTaGATGAGCGTTCAAAGTAAGGTGCTGGGCGATCTA +
Preference number: 6 (lower is better)
Translates to: LHPSCETWYNVC*MSVQSKVLGDL
Trigger: TAGATCGCCCAGCACCTTACTTTGAACGCTCATCCAGCAAACGTTATACCATGTCTCGCAGCTTGGATGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000542652.6
ENST00000544123.5
ENST00000545076.5
ENST00000584670.1
ENST00000637651.1
CDS CAA 72 bp GCGATCTATCAACGCACTGGCTCTTCTCGTTTGCGCTaGTGTCCTGCCACTATAACGAAACTTGGAACCCAA +
Preference number: 6 (lower is better)
Translates to: AIYQRTGSSRLR*CPATITKLGTQ
Trigger: TTGGGTTCCAAGTTTCGTTATAGTGGCAGGACACAAGCGCAAACGAGAAGAGCCAGTGCGTTGATAGATCGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000542652.6
ENST00000544123.5
ENST00000545076.5
ENST00000584670.1
ENST00000637651.1
CDS CAA 72 bp GATGCTTCAGATGGTCTGGTTTTGCCTGCCCCACCCTaGTTTCCTTTGAGCCATAGTGATGTCACAACACCA +
Preference number: 6 (lower is better)
Translates to: DASDGLVLPAPP*FPLSHSDVTTP
Trigger: TGGTGTTGTGACATCACTATGGCTCAAAGGAAACAAGGGTGGGGCAGGCAAAACCAGACCATCTGAAGCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000544123.5
ENST00000585142.5
CDS TCA 72 bp GGCCCCATGAGATCTTGCATGGCAGGTGACTATGCATaGCAAGTCTGTGCTCACATAGATGATATAGTCTGC +
Preference number: 6 (lower is better)
Translates to: GPMRSCMAGDYA*QVCAHIDDIVC
Trigger: GCAGACTATATCATCTATGTGAGCACAGACTTGTCATGCATAGTCACCTGCCATGCAAGATCTCATGGGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578618.5
CDS GCA 72 bp TATCACATCACCAAGTTGTGCAAGTCGCTCGACTGCTaGATTCAGCATTCAAAGCCCTCTCAGAAACGCTCA +
Preference number: 6 (lower is better)
Translates to: YHITKLCKSLDC*IQHSKPSQKRS
Trigger: TGAGCGTTTCTGAGAGGGCTTTGAATGCTGAATGCAGCAGTCGAGCGACTTGCACAACTTGGTGATGTGATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578618.5
CDS CCA 72 bp GCTTGGATTCCGAGTCTGATCCAGATTCGGTCGTCATaGTTGATTGTTCGTGAAAGGCTCAAGAGAACCACA +
Preference number: 6 (lower is better)
Translates to: AWIPSLIQIRSS*LIVRERLKRTT
Trigger: TGTGGTTCTCTTGAGCCTTTCACGAACAATCAACCATGACGACCGAATCTGGATCAGACTCGGAATCCAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580308.5
CDS CCA 72 bp TCGTTTGCGCTTGTGTCCTGCCACTATAACGAAACTTaGAACCCAAGGTTAGGAATTTCTTGGGAGGTGCTT +
Preference number: 6 (lower is better)
Translates to: SFALVSCHYNET*NPRLGISWEVL
Trigger: AAGCACCTCCCAAGAAATTCCTAACCTTGGGTTCCAAGTTTCGTTATAGTGGCAGGACACAAGCGCAAACGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000400111.8
ENST00000540638.6
ENST00000542652.6
ENST00000544123.5
ENST00000545076.5
ENST00000584670.1
ENST00000637651.1
CDS CCA 72 bp GCTTGGATTCCGAGTCTGATCCAGATTCGGTCGTCATaGTTGATTGTTCTCGCAATGCAGTTCAACTTGAGA +
Preference number: 6 (lower is better)
Translates to: AWIPSLIQIRSS*LIVLAMQFNLR
Trigger: TCTCAAGTTGAACTGCATTGCGAGAACAATCAACCATGACGACCGAATCTGGATCAGACTCGGAATCCAAGC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000544123.5
ENST00000585142.5
CDS CCA 72 bp GCTTGGATTCCGAGTCTGATCCAGATTCGGTCGTCATaGTTGATTGTTCTGTGCAATAGAAGCTCCAGAACA +
Preference number: 6 (lower is better)
Translates to: AWIPSLIQIRSS*LIVLCNRSSRT
Trigger: TGTTCTGGAGCTTCTATTGCACAGAACAATCAACCATGACGACCGAATCTGGATCAGACTCGGAATCCAAGC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580179.2
CDS CCA 72 bp TTCTTGGGTGAATGGCGCATGCCTAGTAATGTCCACTaGAAGATTACAGTTCAGGTCCAGAGTAGGCTAACA +
Preference number: 6 (lower is better)
Translates to: FLGEWRMPSNVH*KITVQVQSRLT
Trigger: TGTTAGCCTACTCTGGACCTGAACTGTAATCTTCCAGTGGACATTACTAGGCATGCGCCATTCACCCAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580989.5
CDS CAA 72 bp TGGATTCCGAGTCTGATCCAGATTCGGTCGTCATGGTaGATTGTTCTGTGCAATAGAAGCTCCAGAACAGCA +
Preference number: 6 (lower is better)
Translates to: WIPSLIQIRSSW*IVLCNRSSRTA
Trigger: TGCTGTTCTGGAGCTTCTATTGCACAGAACAATCAACCATGACGACCGAATCTGGATCAGACTCGGAATCCA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580179.2
CDS TCA 72 bp CTCTTACCTCTGGTCAATCCTCTCCATCTTCTGGTGTaGTCTCTGTCTCTTTATGGACCACTACTTTGGTCA +
Preference number: 6 (lower is better)
Translates to: LLPLVNPLHLLV*SLSLYGPLLWS
Trigger: TGACCAAAGTAGTGGTCCATAAAGAGACAGAGATCACACCAGAAGATGGAGAGGATTGACCAGAGGTAAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578618.5
CDS TCA 72 bp CAAGTCTGTGCTCACATAGATGATATAGTCTGCTCATaGTGCTGGCCAAACAGTCACTGGAAAGGTATGTGC +
Preference number: 6 (lower is better)
Translates to: QVCAHIDDIVCS*CWPNSHWKGMC
Trigger: GCACATACCTTTCCAGTGACTGTTTGGCCAGCATCATGAGCAGACTATATCATCTATGTGAGCACAGACTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578618.5
CDS GCA 72 bp ATAGAAGCTCCAGAACAGCAGGGGTTTGTATCTGCTTaGTTCTCTTCCATCTTCAGTCCTAGAAGAATGCCT +
Preference number: 6 (lower is better)
Translates to: IEAPEQQGFVSA*FSSIFSPRRMP
Trigger: AGGCATTCTTCTAGGACTGAAGATGGAAGAGAAGCAAGCAGATACAAACCCCTGCTGTTCTGGAGCTTCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580179.2
CDS GCA 72 bp GAAACTGTAGGACCAACAGGTTTTTCTTTGTTTCTCTaGCAGGGTATTTACCGTCTCACACACACTACCTGG +
Preference number: 6 (lower is better)
Translates to: ETVGPTGFSLFL*QGIYRLTHTTW
Trigger: CCAGGTAGTGTGTGTGAGACGGTAAATACCCTGGCAGAGAAACAAAGAAAAACCTGTTGGTCCTACAGTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000578618.5
ENST00000579951.2
CDS CCA 72 bp GCTTGGATTCCGAGTCTGATCCAGATTCGGTCGTCATaGTTGATTGTTCTCCAAATCCTAAGAGAGACTTTG +
Preference number: 6 (lower is better)
Translates to: AWIPSLIQIRSS*LIVLQILRETL
Trigger: CAAAGTCTCTCTTAGGATTTGGAGAACAATCAACCATGACGACCGAATCTGGATCAGACTCGGAATCCAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582592.1
CDS GCA 72 bp GATCACTTTGTCTTCCAGTTCTTTAGTGTGGTTTGGTaGAAAGCGGAACTCACTAATGTAATCGCTCCCACA +
Preference number: 6 (lower is better)
Translates to: DHFVFQFFSVVW*KAELTNVIAPT
Trigger: TGTGGGAGCGATTACATTAGTGAGTTCCGCTTTGCACCAAACCACACTAAAGAACTGGAAGACAAAGTGATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000341928.7
ENST00000342933.7
ENST00000540638.6
ENST00000542652.6
ENST00000544123.5
ENST00000545076.5
ENST00000581757.1
ENST00000637651.1
CDS GCA 72 bp AGGATTCACTTCAGTTTTTCTTGGGTGAATGGCGCATaGCTAGTAATGTCCACTGGAAGATTACAGTTCAGG +
Preference number: 6 (lower is better)
Translates to: RIHFSFSWVNGA*LVMSTGRLQFR
Trigger: CCTGAACTGTAATCTTCCAGTGGACATTACTAGGCATGCGCCATTCACCCAAGAAAAACTGAAGTGAATCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000580989.5
CDS CCA 72 bp AGAAGCATAGACTCTGCTCTTCCTTTATCCTCTAACTaGCAGTGCATGCAAAAACTCCACAAGAATGGAAGC +
Preference number: 6 (lower is better)
Translates to: RSIDSALPLSSN*QCMQKLHKNGS
Trigger: GCTTCCATTCTTGTGGAGTTTTTGCATGCACTGCCAGTTAGAGGATAAAGGAAGAGCAGAGTCTATGCTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000578618.5
CDS GCA 72 bp CTGGTTTTCCTAACGGTTTGCATGACTGCATTCATGTaGAAGCTAAGTTATTCCTGGTCATGGTCAATGTCT +
Preference number: 6 (lower is better)
Translates to: LVFLTVCMTAFM*KLSYSWSWSMS
Trigger: AGACATTGACCATGACCAGGAATAACTTAGCTTGCACATGAATGCAGTCATGCAAACCGTTAGGAAAACCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544123.5
CDS GCA 72 bp ATAGACTCTGCTCTTCCTTTATCCTCTAACTGGCAGTaGATGCAAAAACTCCACAAGAATGGAAGCTCCAAA +
Preference number: 6 (lower is better)
Translates to: IDSALPLSSNWQ*MQKLHKNGSSK
Trigger: TTTGGAGCTTCCATTCTTGTGGAGTTTTTGCATGCACTGCCAGTTAGAGGATAAAGGAAGAGCAGAGTCTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000578618.5
CDS GCA 72 bp AGTATCCTGGAAGTTAGAATGCTCGTTTGGACAAGATaGCATGACATTCCAGCGTTAAGTCACTGCCAATTA +
Preference number: 6 (lower is better)
Translates to: SILEVRMLVWTR*HDIPALSHCQL
Trigger: TAATTGGCAGTGACTTAACGCTGGAATGTCATGGCATCTTGTCCAAACGAGCATTCTAACTTCCAGGATACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578618.5
CDS CCA 72 bp CCATTACAAATTTGGATAATCAAAGAGTGCAGGCCATaGAATAAAAGGGAACACCAGGAAGACCACACAAGC +
Preference number: 6 (lower is better)
Translates to: PLQIWIIKECRP*NKREHQEDHTS
Trigger: GCTTGTGTGGTCTTCCTGGTGTTCCCTTTTATTCCATGGCCTGCACTCTTTGATTATCCAAATTTGTAATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578618.5
CDS CCA 72 bp AAAAGGATCCTATCTAGGATTCACTTCAGTTTTTCTTaGGTGAATGGCGCATGCCTAGTAATGTCCACTGGA +
Preference number: 6 (lower is better)
Translates to: KRILSRIHFSFS*VNGACLVMSTG
Trigger: TCCAGTGGACATTACTAGGCATGCGCCATTCACCCAAGAAAAACTGAAGTGAATCCTAGATAGGATCCTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000580989.5
CDS CAA 72 bp ATGCTGCAGTGCAGCAATTTCAAAGTTACTGTAGCATaGACTCTCCGGCTTCTATTCCTCCAGGAATATTCT +
Preference number: 6 (lower is better)
Translates to: MLQCSNFKVTVA*TLRLLFLQEYS
Trigger: AGAATATTCCTGGAGGAATAGAAGCCGGAGAGTCAATGCTACAGTAACTTTGAAATTGCTGCACTGCAGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582592.1
CDS TCA 72 bp CATGCAAAAACTCCACAAGAATGGAAGCTCCAAATGTaGGACAAACCCATAAACCAATTCTCCATCCTCTTG +
Preference number: 6 (lower is better)
Translates to: HAKTPQEWKLQM*DKPINQFSILL
Trigger: CAAGAGGATGGAGAATTGGTTTATGGGTTTGTCTCACATTTGGAGCTTCCATTCTTGTGGAGTTTTTGCATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000578618.5
CDS CCA 72 bp TGCTACTTGCACATTTCATGTTTAGGTAATTTCCTATaGATGTGTGATGTCCAGAGGTCATCAGAGACGTTG +
Preference number: 6 (lower is better)
Translates to: CYLHISCLGNFL*MCDVQRSSETL
Trigger: CAACGTCTCTGATGACCTCTGGACATCACACATCCATAGGAAATTACCTAAACATGAAATGTGCAAGTAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578432.2
CDS CAA 72 bp AATAGCATTGAAACTGTAGGACCAACAGGTTTTTCTTaGTTTCTCTGCCAGGGTATTTACCGTCTCACACAC +
Preference number: 6 (lower is better)
Translates to: NSIETVGPTGFS*FLCQGIYRLTH
Trigger: GTGTGTGAGACGGTAAATACCCTGGCAGAGAAACAAAGAAAAACCTGTTGGTCCTACAGTTTCAATGCTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000578618.5
ENST00000579951.2
CDS CAA 72 bp AACACACAAATTGAGCCTCTCAGAGCAAAACTGCCTTaGTTCCAATTAGGCCACATGGCAAGTAAAATCAAA +
Preference number: 6 (lower is better)
Translates to: NTQIEPLRAKLP*FQLGHMASKIK
Trigger: TTTGATTTTACTTGCCATGTGGCCTAATTGGAACAAAGGCAGTTTTGCTCTGAGAGGCTCAATTTGTGTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578618.5
CDS CAA 90 bp AGTATTTGGAACACACAAATTGAGCCTCTCAGAGCAAAACTGCCTTaGTTCCAATTAGGCCACATGGCAAGTAAAATCAAATTTGCCATT +
Preference number: 6 (lower is better)
Translates to: SIWNTQIEPLRAKLP*FQLGHMASKIKFAI
Trigger: AATGGCAAATTTGATTTTACTTGCCATGTGGCCTAATTGGAACAAAGGCAGTTTTGCTCTGAGAGGCTCAATTTGTGTGTTCCAAATACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578618.5
CDS CAA 72 bp GTATATATTATTTCCCTAGTATTTGGAACACACAAATaGAGCCTCTCAGAGCAAAACTGCCTTTGTTCCAAT +
Preference number: 6 (lower is better)
Translates to: VYIISLVFGTHK*SLSEQNCLCSN
Trigger: ATTGGAACAAAGGCAGTTTTGCTCTGAGAGGCTCAATTTGTGTGTTCCAAATACTAGGGAAATAATATATAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578618.5