RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EPB41L1 (Homo sapiens)

Ensembl gene IDs: ENSG00000088367

Ensembl transcript IDs: ENST00000202028.9, ENST00000338074.7, ENST00000373941.5, ENST00000373945.5, ENST00000373946.7, ENST00000373950.6, ENST00000406771.6, ENST00000427533.2, ENST00000430276.5, ENST00000432589.5, ENST00000432603.1, ENST00000441639.5, ENST00000447825.5, ENST00000451082.5, ENST00000452261.5, ENST00000454226.5, ENST00000479336.1, ENST00000628415.2, ENST00000636016.2

Found 1955 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGGAGTTGGAGTGGACCCACCGGCCTGCACCAGGGGGAATGCCACTaGTTCTGCTGCCCCGCTGAACTTCCCATTTGCCCAGAGAAGCAA +
Preference number: 1 (lower is better)
Translates to: GSWSGPTGLHQGECH*FCCPAELPICPEKQ
Trigger: TTGCTTCTCTGGGCAAATGGGAAGTTCAGCGGGGCAGCAGAATCAGTGGCATTCCCCCTGGTGCAGGCCGGTGGGTCCACTCCAACTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
3UTR CCA 90 bp CCTGGTGTATGGAAAGTGTGCTGCTACACTCAGGGGGAGTTGGAGTaGACCCACCGGCCTGCACCAGGGGGAATGCCACTGATTCTGCTG +
Preference number: 1 (lower is better)
Translates to: PGVWKVCCYTQGELE*THRPAPGGMPLILL
Trigger: CAGCAGAATCAGTGGCATTCCCCCTGGTGCAGGCCGGTGGGTCCACTCCAACTCCCCCTGAGTGTAGCAGCACACTTTCCATACACCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
3UTR TCA 90 bp GGTTGGCGAGAGTGGGGAGATGCTCTCAGATGGGCCAGCCATGGTTaGAATATAAAGCTGGCTCAGGTGGCTCCTCAGGTTCCGCCCTCC +
Preference number: 1 (lower is better)
Translates to: GWREWGDALRWASHG*NIKLAQVAPQVPPS
Trigger: GGAGGGCGGAACCTGAGGAGCCACCTGAGCCAGCTTTATATTTCAACCATGGCTGGCCCATCTGAGAGCATCTCCCCACTCTCGCCAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
3UTR TCA 90 bp AGAGGGAGGTCTCCAAGCCAAGGTCTTATGCAGAGCTGGAGCCTATaGGCAACATCACCCGTCAGTCTCAGCTTTGTCCTGGGACAGGGG +
Preference number: 1 (lower is better)
Translates to: RGRSPSQGLMQSWSL*ATSPVSLSFVLGQG
Trigger: CCCCTGTCCCAGGACAAAGCTGAGACTGACGGGTGATGTTGCTCATAGGCTCCAGCTCTGCATAAGACCTTGGCTTGGAGACCTCCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
3UTR TCA 90 bp TGCCTGCATCTCCGTAGAAGGGAGGTCACAGCATCCGCGGGATGGTaGTTTCCCCAAACCCTGGTGGCCCATAAACTCCACAAGCTAAGC +
Preference number: 1 (lower is better)
Translates to: CLHLRRREVTASAGW*FPQTLVAHKLHKLS
Trigger: GCTTAGCTTGTGGAGTTTATGGGCCACCAGGGTTTGGGGAAATCACCATCCCGCGGATGCTGTGACCTCCCTTCTACGGAGATGCAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
3UTR GCA 90 bp GGCATCCCTGGGCTATGCCCCGATAGGTTGGCGAGAGTGGGGAGATaGTCTCAGATGGGCCAGCCATGGTTGAAATATAAAGCTGGCTCA +
Preference number: 1 (lower is better)
Translates to: GIPGLCPDRLARVGR*SQMGQPWLKYKAGS
Trigger: TGAGCCAGCTTTATATTTCAACCATGGCTGGCCCATCTGAGAGCATCTCCCCACTCTCGCCAACCTATCGGGGCATAGCCCAGGGATGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
3UTR CCA 90 bp ACGTGCAGAACCAGGGCGGGAGGGACTTCTACAATCATCGTGGTCTaGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTGAGCAAGGGA +
Preference number: 1 (lower is better)
Translates to: TCRTRAGGTSTIIVV*LAFLIWRGKGVSKG
Trigger: TCCCTTGCTCACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCTGGTTCTGCACGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
3UTR CCA 90 bp GATAGGTTGGCGAGAGTGGGGAGATGCTCTCAGATGGGCCAGCCATaGTTGAAATATAAAGCTGGCTCAGGTGGCTCCTCAGGTTCCGCC +
Preference number: 1 (lower is better)
Translates to: DRLARVGRCSQMGQP*LKYKAGSGGSSGSA
Trigger: GGCGGAACCTGAGGAGCCACCTGAGCCAGCTTTATATTTCAACCATGGCTGGCCCATCTGAGAGCATCTCCCCACTCTCGCCAACCTATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
3UTR TCA 90 bp GGGGCACTTTCTGAGCTCAGAGAAGTAGCTTGTGGCAGACAAGCCTaGGGAAGCCCACGTGTGGCAGAGAGCAATGCCAAGCTTGTGATG +
Preference number: 1 (lower is better)
Translates to: GALSELREVACGRQA*GSPRVAESNAKLVM
Trigger: CATCACAAGCTTGGCATTGCTCTCTGCCACACGTGGGCTTCCTCAGGCTTGTCTGCCACAAGCTACTTCTCTGAGCTCAGAAAGTGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
3UTR TCA 90 bp CACCGGCCTGCACCAGGGGGAATGCCACTGATTCTGCTGCCCCGCTaGACTTCCCATTTGCCCAGAGAAGCAAATGCTATTCTGATTTCC +
Preference number: 1 (lower is better)
Translates to: HRPAPGGMPLILLPR*TSHLPREANAILIS
Trigger: GGAAATCAGAATAGCATTTGCTTCTCTGGGCAAATGGGAAGTTCAGCGGGGCAGCAGAATCAGTGGCATTCCCCCTGGTGCAGGCCGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
3UTR TCA 90 bp GTACGTCGCAGCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATaGAGGCCCCTTCTTAATGGTTCTCTGGCTTGGGTTGGACCAGAA +
Preference number: 1 (lower is better)
Translates to: VRRSWDVSVASENPE*RPLLNGSLAWVGPE
Trigger: TTCTGGTCCAACCCAAGCCAGAGAACCATTAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGCTGCGACGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
3UTR GCA 90 bp GATTCTGCTGCCCCGCTGAACTTCCCATTTGCCCAGAGAAGCAAATaGTATTCTGATTTCCTGCCCTGCCTCAGGCCAGCACCAGCTAAG +
Preference number: 1 (lower is better)
Translates to: DSAAPLNFPFAQRSK*YSDFLPCLRPAPAK
Trigger: CTTAGCTGGTGCTGGCCTGAGGCAGGGCAGGAAATCAGAATAGCATTTGCTTCTCTGGGCAAATGGGAAGTTCAGCGGGGCAGCAGAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
3UTR CCA 90 bp GGGGATAGCCTGATGTCACATGGTGAGTTAGGAGCTGAGCCAGGATaGTCACCCAGAACTCCTAACCGCCCTCAGGGACTTTTTCCACTA +
Preference number: 1 (lower is better)
Translates to: GDSLMSHGELGAEPG*SPRTPNRPQGLFPL
Trigger: TAGTGGAAAAAGTCCCTGAGGGCGGTTAGGAGTTCTGGGTGACCATCCTGGCTCAGCTCCTAACTCACCATGTGACATCAGGCTATCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
3UTR GCA 90 bp CAGAACCAGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTaGGTTTCTTATTTGGCGGGGGAAAGGGGTGAGCAAGGGATTATA +
Preference number: 1 (lower is better)
Translates to: QNQGGRDFYNHRGLA*VSYLAGERGEQGII
Trigger: TATAATCCCTTGCTCACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCTGGTTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
3UTR CCA 90 bp CCCTACTGTGAGCCAACCCACACCCAGAGTCCAGGTCTCCTTAGCTaGGCCAGTTCAGTGAGATCTAGGAACCTCAGGATACATCAATCA +
Preference number: 1 (lower is better)
Translates to: PYCEPTHTQSPGLLS*ASSVRSRNLRIHQS
Trigger: TGATTGATGTATCCTGAGGTTCCTAGATCTCACTGAACTGGCCCAGCTAAGGAGACCTGGACTCTGGGTGTGGGTTGGCTCACAGTAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
3UTR GCA 90 bp AATGTAGGTGTTCAGATGTCGGTTGTTGCTGTCAGCCAACTGCTCTaGCAGCCCCAGCAGCAGTGCAAGGATGCGGTGTTTCCTGTATAT +
Preference number: 1 (lower is better)
Translates to: NVGVQMSVVAVSQLL*QPQQQCKDAVFPVY
Trigger: ATATACAGGAAACACCGCATCCTTGCACTGCTGCTGGGGCTGGCAGAGCAGTTGGCTGACAGCAACAACCGACATCTGAACACCTACATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
3UTR GCA 90 bp GCATTCAAGTGGGCCTTAGAGATGCTGGAGAAGAACAAATGGAATTaGTCGTCTGCTAACTGTAACGTGCAGAACCAGGGCGGGAGGGAC +
Preference number: 1 (lower is better)
Translates to: AFKWALEMLEKNKWN*SSANCNVQNQGGRD
Trigger: GTCCCTCCCGCCCTGGTTCTGCACGTTACAGTTAGCAGACGAGCAATTCCATTTGTTCTTCTCCAGCATCTCTAAGGCCCACTTGAATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
3UTR GCA 90 bp TGCTGGAGAAGAACAAATGGAATTGCTCGTCTGCTAACTGTAACGTaGAGAACCAGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGG +
Preference number: 1 (lower is better)
Translates to: CWRRTNGIARLLTVT*RTRAGGTSTIIVVW
Trigger: CCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCTGGTTCTGCACGTTACAGTTAGCAGACGAGCAATTCCATTTGTTCTTCTCCAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
3UTR CCA 90 bp CCACCATCTTCTACAATGGCTGAGAGCACCACCTCCCTTTGGATATaGAGTTGGTTATTACAATGGGGTCAGGGAAGGGCAGAATGTGGC +
Preference number: 1 (lower is better)
Translates to: PPSSTMAESTTSLWI*SWLLQWGQGRAECG
Trigger: GCCACATTCTGCCCTTCCCTGACCCCATTGTAATAACCAACTCCATATCCAAAGGGAGGTGGTGCTCTCAGCCATTGTAGAAGATGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
3UTR CCA 90 bp TCCTTTGCATTCAAGTGGGCCTTAGAGATGCTGGAGAAGAACAAATaGAATTGCTCGTCTGCTAACTGTAACGTGCAGAACCAGGGCGGG +
Preference number: 1 (lower is better)
Translates to: SFAFKWALEMLEKNK*NCSSANCNVQNQGG
Trigger: CCCGCCCTGGTTCTGCACGTTACAGTTAGCAGACGAGCAATTCCATTTGTTCTTCTCCAGCATCTCTAAGGCCCACTTGAATGCAAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
3UTR TCA 90 bp CAACCCACACCCAGAGTCCAGGTCTCCTTAGCTGGGCCAGTTCAGTaGGATCTAGGAACCTCAGGATACATCAATCACAGTCAGATAATT +
Preference number: 1 (lower is better)
Translates to: QPTPRVQVSLAGPVQ*DLGTSGYINHSQII
Trigger: AATTATCTGACTGTGATTGATGTATCCTGAGGTTCCTAGATCTCACTGAACTGGCCCAGCTAAGGAGACCTGGACTCTGGGTGTGGGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
3UTR CCA 90 bp TTAAAGCCACCATCTTCTACAATGGCTGAGAGCACCACCTCCCTTTaGATATGGAGTTGGTTATTACAATGGGGTCAGGGAAGGGCAGAA +
Preference number: 1 (lower is better)
Translates to: LKPPSSTMAESTTSL*IWSWLLQWGQGRAE
Trigger: TTCTGCCCTTCCCTGACCCCATTGTAATAACCAACTCCATATCCAAAGGGAGGTGGTGCTCTCAGCCATTGTAGAAGATGGTGGCTTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
3UTR CCA 90 bp GAAGACAGACAAGACAAACGTCTCTATTCTCTACAAAGAGAAGGATaGGGAGGAAACAGTGCCCTAGATTCTAGCTTTGCAGGTCCCCTC +
Preference number: 1 (lower is better)
Translates to: EDRQDKRLYSLQREG*GGNSALDSSFAGPL
Trigger: GAGGGGACCTGCAAAGCTAGAATCTAGGGCACTGTTTCCTCCCCATCCTTCTCTTTGTAGAGAATAGAGACGTTTGTCTTGTCTGTCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
3UTR TCA 90 bp GCAGTTTCAGGCCAGTCTTGGAATGTGCTTGCAGGATTCAAAAACTaGAACAGGTCCTGGTACTTCCTGTACCCTCAGATGGAAAAGATC +
Preference number: 1 (lower is better)
Translates to: AVSGQSWNVLAGFKN*NRSWYFLYPQMEKI
Trigger: GATCTTTTCCATCTGAGGGTACAGGAAGTACCAGGACCTGTTTCAGTTTTTGAATCCTGCAAGCACATTCCAAGACTGGCCTGAAACTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
3UTR TCA 90 bp ATATATCTATATATATATGCTTTTCCCTTCCCAGTCTCTCATCAGTaGCAGTACGTCGCAGCTGGGACGTCAGTGTTGCGTCGGAGAATC +
Preference number: 1 (lower is better)
Translates to: IYLYIYAFPFPVSHQ*QYVAAGTSVLRRRI
Trigger: GATTCTCCGACGCAACACTGACGTCCCAGCTGCGACGTACTGTCACTGATGAGAGACTGGGAAGGGAAAAGCATATATATATAGATATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
3UTR CCA 90 bp GACTTCTCTTGCTTTGCTGTGCAAGTGTTTTCCTTTGCATTCAAGTaGGCCTTAGAGATGCTGGAGAAGAACAAATGGAATTGCTCGTCT +
Preference number: 1 (lower is better)
Translates to: DFSCFAVQVFSFAFK*ALEMLEKNKWNCSS
Trigger: AGACGAGCAATTCCATTTGTTCTTCTCCAGCATCTCTAAGGCCCACTTGAATGCAAAGGAAAACACTTGCACAGCAAAGCAAGAGAAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
3UTR GCA 90 bp TGTTTCCTGTATATATATCTATATCTCTATATATCTATATATATATaGTTTTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGCAGC +
Preference number: 1 (lower is better)
Translates to: CFLYIYLYLYISIYI*FSLPSLSSVTVRRS
Trigger: GCTGCGACGTACTGTCACTGATGAGAGACTGGGAAGGGAAAAGCATATATATATAGATATATAGAGATATAGATATATATACAGGAAACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
3UTR-3UTR TCA 90 bp CCTATGAGCAACATCACCCGTCAGTCTCAGCTTTGTCCTGGGACAGGGGAGGGCCGTCAGCCCCTACTGTaGGCCAACCCACACCCAGAG +
Preference number: 2 (lower is better)
Translates to: PMSNITRQSQLCPGTGEGRQPLL*ANPHPE
Trigger: CTCTGGGTGTGGGTTGGCTCACAGTAGGGGCTGACG...GCCCTCCCCTGTCCCAGGACAAAGCTGAGACTGACGGGTGATGTTGCTCATAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
3UTR-3UTR GCA 90 bp CCGCCCTCAGGGACTTTTTCCACTATGCTACATGGCCTCCTGGGTGGAGAGGTGCAGCCCCAGCAGCAGTaGAAGGATGCGGTGTTTCCT +
Preference number: 2 (lower is better)
Translates to: PPSGTFSTMLHGLLGGEVQPQQQ*KDAVFP
Trigger: AGGAAACACCGCATCCTTGCACTGCTGCTGGGGCTG...CACCTCTCCACCCAGGAGGCCATGTAGCATAGTGGAAAAAGTCCCTGAGGGCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
3UTR-3UTR GCA 90 bp CTCCCCTCCCACCTTCTTCAGCCTGAGAATAGTCCCTGGCACAAGCAGGTAATCGTCAGCCAACTGCTCTaGCAGCCCCAGCAGCAGTGC +
Preference number: 2 (lower is better)
Translates to: LPSHLLQPENSPWHKQVIVSQLL*QPQQQC
Trigger: GCACTGCTGCTGGGGCTGGCAGAGCAGTTGGCTGAC...GATTACCTGCTTGTGCCAGGGACTATTCTCAGGCTGAAGAAGGTGGGAGGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
3UTR-3UTR GCA 90 bp CCCTGCCCCAAAGCCAGGTGCAAAATCCACAACAAGGATCCTCCCTCTGAGGTGGCGAGAGTGGGGAGATaGTCTCAGATGGGCCAGCCA +
Preference number: 2 (lower is better)
Translates to: PCPKARCKIHNKDPPSEVARVGR*SQMGQP
Trigger: TGGCTGGCCCATCTGAGAGCATCTCCCCACTCTCGC...CACCTCAGAGGGAGGATCCTTGTTGTGGATTTTGCACCTGGCTTTGGGGCAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
3UTR CAA 90 bp AGGTTGGCGAGAGTGGGGAGATGCTCTCAGATGGGCCAGCCATGGTaGAAATATAAAGCTGGCTCAGGTGGCTCCTCAGGTTCCGCCCTC +
Preference number: 2 (lower is better)
Translates to: RLARVGRCSQMGQPW*KYKAGSGGSSGSAL
Trigger: GAGGGCGGAACCTGAGGAGCCACCTGAGCCAGCTTTATATTTCAACCATGGCTGGCCCATCTGAGAGCATCTCCCCACTCTCGCCAACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
3UTR-3UTR CCA 90 bp CCCTGCCCCAAAGCCAGGTGCAAAATCCACAACAAGGATCCTCCCTCTGAGGTGAGCAGAGTCCCAGACTaGGACCCAGTACCTGAGCAC +
Preference number: 2 (lower is better)
Translates to: PCPKARCKIHNKDPPSEVSRVPD*DPVPEH
Trigger: GTGCTCAGGTACTGGGTCCCAGTCTGGGACTCTGCT...CACCTCAGAGGGAGGATCCTTGTTGTGGATTTTGCACCTGGCTTTGGGGCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
3UTR-3UTR CCA 90 bp CCCTGCCCCAAAGCCAGGTGCAAAATCCACAACAAGGATCCTCCCTCTGAGGTGGTCTCAGCTTTGTCCTaGGACAGGGGAGGGCTTTGC +
Preference number: 2 (lower is better)
Translates to: PCPKARCKIHNKDPPSEVVSALS*DRGGLC
Trigger: GCAAAGCCCTCCCCTGTCCCAGGACAAAGCTGAGAC...CACCTCAGAGGGAGGATCCTTGTTGTGGATTTTGCACCTGGCTTTGGGGCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
3UTR-3UTR CCA 90 bp CCAGGATGGTCACCCAGAACTCCTAACCGCCCTCAGGGACTTTTTCCACTATGCACATGGCCTCCTGGGTaGAGAGGTGGCACAGAGAGG +
Preference number: 2 (lower is better)
Translates to: PGWSPRTPNRPQGLFPLCTWPPG*RGGTER
Trigger: CCTCTCTGTGCCACCTCTCCACCCAGGAGGCCATGT...GCATAGTGGAAAAAGTCCCTGAGGGCGGTTAGGAGTTCTGGGTGACCATCCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
3UTR CAA 90 bp AAAGAACCTGGTGTATGGAAAGTGTGCTGCTACACTCAGGGGGAGTaGGAGTGGACCCACCGGCCTGCACCAGGGGGAATGCCACTGATT +
Preference number: 2 (lower is better)
Translates to: KEPGVWKVCCYTQGE*EWTHRPAPGGMPLI
Trigger: AATCAGTGGCATTCCCCCTGGTGCAGGCCGGTGGGTCCACTCCAACTCCCCCTGAGTGTAGCAGCACACTTTCCATACACCAGGTTCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
3UTR-3UTR TCA 90 bp CAGAACCAGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCGTTTCTCCAGTCTCTCATCAGTaGCAGTACGTCGCAGCTGGG +
Preference number: 2 (lower is better)
Translates to: QNQGGRDFYNHRGLACVSPVSHQ*QYVAAG
Trigger: CCCAGCTGCGACGTACTGTCACTGATGAGAGACTGG...AGAAACGCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCTGGTTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
3UTR-3UTR TCA 90 bp GCTCGTCTGCTAACTGTAACGTGCAGAACCAGGGCGGGAGGGACTTCTACAATCCCAGTCTCTCATCAGTaGCAGTACGTCGCAGCTGGG +
Preference number: 2 (lower is better)
Translates to: ARLLTVTCRTRAGGTSTIPVSHQ*QYVAAG
Trigger: CCCAGCTGCGACGTACTGTCACTGATGAGAGACTGG...GATTGTAGAAGTCCCTCCCGCCCTGGTTCTGCACGTTACAGTTAGCAGACGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
3UTR-3UTR TCA 90 bp CTCCCCTCCCACCTTCTTCAGCCTGAGAATAGTCCCTGGCACAAGCAGGTAATCTCAGGGTCTGCCCCATaGAGCCTCCTTACCATGGCT +
Preference number: 2 (lower is better)
Translates to: LPSHLLQPENSPWHKQVISGSAP*SLLTMA
Trigger: AGCCATGGTAAGGAGGCTTCATGGGGCAGACCCTGA...GATTACCTGCTTGTGCCAGGGACTATTCTCAGGCTGAAGAAGGTGGGAGGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
3UTR-3UTR TCA 90 bp CCCTGCCCCAAAGCCAGGTGCAAAATCCACAACAAGGATCCTCCCTCTGAGGTGCAGAGCTGGAGCCTATaGGCAACATCACCCGTCAGT +
Preference number: 2 (lower is better)
Translates to: PCPKARCKIHNKDPPSEVQSWSL*ATSPVS
Trigger: ACTGACGGGTGATGTTGCTCATAGGCTCCAGCTCTG...CACCTCAGAGGGAGGATCCTTGTTGTGGATTTTGCACCTGGCTTTGGGGCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
3UTR-3UTR GCA 90 bp GCTCGTCTGCTAACTGTAACGTGCAGAACCAGGGCGGGAGGGACTTCTACAATCCAGCCCCAGCAGCAGTaGAAGGATGCGGTGTTTCCT +
Preference number: 2 (lower is better)
Translates to: ARLLTVTCRTRAGGTSTIQPQQQ*KDAVFP
Trigger: AGGAAACACCGCATCCTTGCACTGCTGCTGGGGCTG...GATTGTAGAAGTCCCTCCCGCCCTGGTTCTGCACGTTACAGTTAGCAGACGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
3UTR-3UTR GCA 90 bp GGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTGAGCAAGGGATTATAGTCAGCCAACTGCTCTaGCAGCCCCAGCAGCAGTGC +
Preference number: 2 (lower is better)
Translates to: GLACVSYLAGERGEQGIIVSQLL*QPQQQC
Trigger: GCACTGCTGCTGGGGCTGGCAGAGCAGTTGGCTGAC...TATAATCCCTTGCTCACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
3UTR-3UTR GCA 90 bp GAGGCGGGAGAGAGGAAGGTAGGTTTTGCAGCCCAGTGTCAAGATCCAGAAAGTTTGCTGTCAGCCAACTaGTCTGCCAGCCCCAGCAGC +
Preference number: 2 (lower is better)
Translates to: EAGERKVGFAAQCQDPESLLSAN*SASPSS
Trigger: GCTGCTGGGGCTGGCAGAGCAGTTGGCTGACAGCAA...ACTTTCTGGATCTTGACACTGGGCTGCAAAACCTACCTTCCTCTCTCCCGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
3UTR-3UTR GCA 90 bp ACAAATGGAATTGCTCGTCTGCTAACTGTAACGTGCAGAACCAGGGCGGGAGGGTTGCTGTCAGCCAACTaGTCTGCCAGCCCCAGCAGC +
Preference number: 2 (lower is better)
Translates to: TNGIARLLTVTCRTRAGGLLSAN*SASPSS
Trigger: GCTGCTGGGGCTGGCAGAGCAGTTGGCTGACAGCAA...CCCTCCCGCCCTGGTTCTGCACGTTACAGTTAGCAGACGAGCAATTCCATTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
3UTR-3UTR GCA 90 bp CCGCCCTCAGGGACTTTTTCCACTATGCTACATGGCCTCCTGGGTGGAGAGGTGCATCGTGGTCTGGCTTaGGTTTCTTATTTGGCGGGG +
Preference number: 2 (lower is better)
Translates to: PPSGTFSTMLHGLLGGEVHRGLA*VSYLAG
Trigger: CCCCGCCAAATAAGAAACGCAAGCCAGACCACGATG...CACCTCTCCACCCAGGAGGCCATGTAGCATAGTGGAAAAAGTCCCTGAGGGCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
3UTR-3UTR GCA 90 bp CCGCCCTCAGGGACTTTTTCCACTATGCTACATGGCCTCCTGGGTGGAGAGGTGCAAAGGAGAGTCATCTaGAGTGGCCCTCAGAAGGAC +
Preference number: 2 (lower is better)
Translates to: PPSGTFSTMLHGLLGGEVQRRVI*SGPQKD
Trigger: GTCCTTCTGAGGGCCACTGCAGATGACTCTCCTTTG...CACCTCTCCACCCAGGAGGCCATGTAGCATAGTGGAAAAAGTCCCTGAGGGCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
3UTR-3UTR CCA 90 bp CTCCCCTCCCACCTTCTTCAGCCTGAGAATAGTCCCTGGCACAAGCAGGTAATCGAGGAAGCCCACGTGTaGCAGAGAGCAATGCCAAGC +
Preference number: 2 (lower is better)
Translates to: LPSHLLQPENSPWHKQVIEEAHV*QRAMPS
Trigger: GCTTGGCATTGCTCTCTGCCACACGTGGGCTTCCTC...GATTACCTGCTTGTGCCAGGGACTATTCTCAGGCTGAAGAAGGTGGGAGGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
3UTR-3UTR TCA 90 bp CCAGGATGGTCACCCAGAACTCCTAACCGCCCTCAGGGACTTTTTCCACTATGCCAGAGCTGGAGCCTATaGGCAACATCACCCGTCAGT +
Preference number: 2 (lower is better)
Translates to: PGWSPRTPNRPQGLFPLCQSWSL*ATSPVS
Trigger: ACTGACGGGTGATGTTGCTCATAGGCTCCAGCTCTG...GCATAGTGGAAAAAGTCCCTGAGGGCGGTTAGGAGTTCTGGGTGACCATCCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
3UTR-3UTR GCA 90 bp CCTATGAGCAACATCACCCGTCAGTCTCAGCTTTGTCCTGGGACAGGGGAGGGCGGGTTGGACCAGAAATaGCAGGATCTCTTCACAGAG +
Preference number: 2 (lower is better)
Translates to: PMSNITRQSQLCPGTGEGGLDQK*QDLFTE
Trigger: CTCTGTGAAGAGATCCTGGCATTTCTGGTCCAACCC...GCCCTCCCCTGTCCCAGGACAAAGCTGAGACTGACGGGTGATGTTGCTCATAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
3UTR-3UTR GCA 90 bp CCCTGCCCCAAAGCCAGGTGCAAAATCCACAACAAGGATCCTCCCTCTGAGGTGCTGGGACGTCAGTGTTaGGTCGGAGAATCCAGAATG +
Preference number: 2 (lower is better)
Translates to: PCPKARCKIHNKDPPSEVLGRQC*VGESRM
Trigger: CATTCTGGATTCTCCGACGCAACACTGACGTCCCAG...CACCTCAGAGGGAGGATCCTTGTTGTGGATTTTGCACCTGGCTTTGGGGCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
3UTR-3UTR GCA 90 bp AGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGTTGCTGTCAGCCAACTaGTCTGCCAGCCCCAGCAGC +
Preference number: 2 (lower is better)
Translates to: RAGGTSTIIVVWLAFLIWLLSAN*SASPSS
Trigger: GCTGCTGGGGCTGGCAGAGCAGTTGGCTGACAGCAA...CCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
3UTR CAA 90 bp CCCACGTGTGGCAGAGAGCAATGCCAAGCTTGTGATGGGAGCTTCTaGAAGGGTTCCTGTGGTCTTGGGGTAATTTCTGGGCACAAGCTC +
Preference number: 2 (lower is better)
Translates to: PTCGREQCQACDGSF*KGSCGLGVISGHKL
Trigger: GAGCTTGTGCCCAGAAATTACCCCAAGACCACAGGAACCCTTCAAGAAGCTCCCATCACAAGCTTGGCATTGCTCTCTGCCACACGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
3UTR-3UTR TCA 90 bp AATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTGAGCAACCAGTCTCTCATCAGTaGCAGTACGTCGCAGCTGGG +
Preference number: 2 (lower is better)
Translates to: NHRGLACVSYLAGERGEQPVSHQ*QYVAAG
Trigger: CCCAGCTGCGACGTACTGTCACTGATGAGAGACTGG...TTGCTCACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
3UTR-3UTR TCA 90 bp AACCAGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATCCAGTCTCTCATCAGTaGCAGTACGTCGCAGCTGGG +
Preference number: 2 (lower is better)
Translates to: NQGGRDFYNHRGLACVSYPVSHQ*QYVAAG
Trigger: CCCAGCTGCGACGTACTGTCACTGATGAGAGACTGG...ATAAGAAACGCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCTGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
3UTR-3UTR TCA 90 bp CCTATGAGCAACATCACCCGTCAGTCTCAGCTTTGTCCTGGGACAGGGGAGGGCTTGCAAATGCAGTTTTaGTCTTTCAGGGTCTGCCCC +
Preference number: 2 (lower is better)
Translates to: PMSNITRQSQLCPGTGEGLQMQF*SFRVCP
Trigger: GGGGCAGACCCTGAAAGATCAAAACTGCATTTGCAA...GCCCTCCCCTGTCCCAGGACAAAGCTGAGACTGACGGGTGATGTTGCTCATAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
3UTR-3UTR GCA 90 bp AGGTGTATGTCATCACTGACAAGCCAAAGGGACGCATCTAACCTGGGCCGCCTGCATCGTGGTCTGGCTTaGGTTTCTTATTTGGCGGGG +
Preference number: 2 (lower is better)
Translates to: RCMSSLTSQRDASNLGRLHRGLA*VSYLAG
Trigger: CCCCGCCAAATAAGAAACGCAAGCCAGACCACGATG...CAGGCGGCCCAGGTTAGATGCGTCCCTTTGGCTTGTCAGTGATGACATACACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
3UTR-3UTR GCA 90 bp CTCCCCTCCCACCTTCTTCAGCCTGAGAATAGTCCCTGGCACAAGCAGGTAATCTGTGGCAGAGAGCAATaGCAAGCTTGTGATGGGAGC +
Preference number: 2 (lower is better)
Translates to: LPSHLLQPENSPWHKQVICGREQ*QACDGS
Trigger: GCTCCCATCACAAGCTTGGCATTGCTCTCTGCCACA...GATTACCTGCTTGTGCCAGGGACTATTCTCAGGCTGAAGAAGGTGGGAGGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
3UTR-3UTR CCA 90 bp TACGTCGCAGCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCAATGGTTCTCTGGCTTaGGTTGGACCAGAAATGCCA +
Preference number: 2 (lower is better)
Translates to: YVAAGTSVLRRRIQNEGPNGSLA*VGPEMP
Trigger: TGGCATTTCTGGTCCAACCCAAGCCAGAGAACCATT...GGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGCTGCGACGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
3UTR-3UTR CCA 90 bp AAATGTAGGTGTTCAGATGTCGGTTGTTGCTGTCAGCCAACTGCTCTGCCAGCCACAGTACGTCGCAGCTaGGACGTCAGTGTTGCGTCG +
Preference number: 2 (lower is better)
Translates to: KCRCSDVGCCCQPTALPATVRRS*DVSVAS
Trigger: CGACGCAACACTGACGTCCCAGCTGCGACGTACTGT...GGCTGGCAGAGCAGTTGGCTGACAGCAACAACCGACATCTGAACACCTACATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
3UTR-3UTR CCA 90 bp AATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTGAGCAAACAGTACGTCGCAGCTaGGACGTCAGTGTTGCGTCG +
Preference number: 2 (lower is better)
Translates to: NHRGLACVSYLAGERGEQTVRRS*DVSVAS
Trigger: CGACGCAACACTGACGTCCCAGCTGCGACGTACTGT...TTGCTCACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
3UTR-3UTR TCA 90 bp AACGTGCAGAACCAGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCTCGGAGAATCCAGAATaGAGGCCCCTTCTTAATGGT +
Preference number: 2 (lower is better)
Translates to: NVQNQGGRDFYNHRGLACSENPE*RPLLNG
Trigger: ACCATTAAGAAGGGGCCTTCATTCTGGATTCTCCGA...GCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCTGGTTCTGCACGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
3UTR-3UTR TCA 90 bp ACTCTCAAGAAGGGCAGGAAGAAGGTTCTGTGGCTTTTCCACCAGGATTGTAGATGTGGCAGACAAGCCTaGGGAAGCCCACGTGTGGCA +
Preference number: 2 (lower is better)
Translates to: TLKKGRKKVLWLFHQDCRCGRQA*GSPRVA
Trigger: TGCCACACGTGGGCTTCCTCAGGCTTGTCTGCCACA...TCTACAATCCTGGTGGAAAAGCCACAGAACCTTCTTCCTGCCCTTCTTGAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
3UTR-3UTR GCA 90 bp GAAGGTGTCTTGAACTGGCATTTTGGGGACGACATCTGTGTTGCTTCTTTCTTGGTCAGCCAACTGCTCTaGCAGCCCCAGCAGCAGTGC +
Preference number: 2 (lower is better)
Translates to: EGVLNWHFGDDICVASFLVSQLL*QPQQQC
Trigger: GCACTGCTGCTGGGGCTGGCAGAGCAGTTGGCTGAC...CAAGAAAGAAGCAACACAGATGTCGTCCCCAAAATGCCAGTTCAAGACACCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
3UTR-3UTR GCA 90 bp GCATTCAAGTGGGCCTTAGAGATGCTGGAGAAGAACAAATGGAATTGCTCGTCTGTCAGCCAACTGCTCTaGCAGCCCCAGCAGCAGTGC +
Preference number: 2 (lower is better)
Translates to: AFKWALEMLEKNKWNCSSVSQLL*QPQQQC
Trigger: GCACTGCTGCTGGGGCTGGCAGAGCAGTTGGCTGAC...AGACGAGCAATTCCATTTGTTCTTCTCCAGCATCTCTAAGGCCCACTTGAATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
3UTR-3UTR GCA 90 bp CAGAACCAGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTCAGATGTCGGTTGTTaGTGTCAGCCAACTGCTCTG +
Preference number: 2 (lower is better)
Translates to: QNQGGRDFYNHRGLACVSSDVGC*CQPTAL
Trigger: CAGAGCAGTTGGCTGACAGCAACAACCGACATCTGA...AGAAACGCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCTGGTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
3UTR-3UTR GCA 90 bp AGGTGTATGTCATCACTGACAAGCCAAAGGGACGCATCTAACCTGGGCCGCCTGTCAGATGTCGGTTGTTaGTGTCAGCCAACTGCTCTG +
Preference number: 2 (lower is better)
Translates to: RCMSSLTSQRDASNLGRLSDVGC*CQPTAL
Trigger: CAGAGCAGTTGGCTGACAGCAACAACCGACATCTGA...CAGGCGGCCCAGGTTAGATGCGTCCCTTTGGCTTGTCAGTGATGACATACACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
3UTR-3UTR GCA 90 bp CTCCCCTCCCACCTTCTTCAGCCTGAGAATAGTCCCTGGCACAAGCAGGTAATCGAGGAAGGTAGGTTTTaGAGCCCAGTGTCAAGATCC +
Preference number: 2 (lower is better)
Translates to: LPSHLLQPENSPWHKQVIEEGRF*SPVSRS
Trigger: GGATCTTGACACTGGGCTGCAAAACCTACCTTCCTC...GATTACCTGCTTGTGCCAGGGACTATTCTCAGGCTGAAGAAGGTGGGAGGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
3UTR-3UTR GCA 90 bp ACTCTCAAGAAGGGCAGGAAGAAGGTTCTGTGGCTTTTCCACCAGGATTGTAGAGCGAGAGTGGGGAGATaGTCTCAGATGGGCCAGCCA +
Preference number: 2 (lower is better)
Translates to: TLKKGRKKVLWLFHQDCRARVGR*SQMGQP
Trigger: TGGCTGGCCCATCTGAGAGCATCTCCCCACTCTCGC...TCTACAATCCTGGTGGAAAAGCCACAGAACCTTCTTCCTGCCCTTCTTGAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
3UTR-3UTR CCA 90 bp AGGAAATGTAGGTGTTCAGATGTCGGTTGTTGCTGTCAGCCAACTGCTCTGCCAACAGTACGTCGCAGCTaGGACGTCAGTGTTGCGTCG +
Preference number: 2 (lower is better)
Translates to: RKCRCSDVGCCCQPTALPTVRRS*DVSVAS
Trigger: CGACGCAACACTGACGTCCCAGCTGCGACGTACTGT...TGGCAGAGCAGTTGGCTGACAGCAACAACCGACATCTGAACACCTACATTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
3UTR-3UTR CCA 90 bp GACTTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGACAGTACGTCGCAGCTaGGACGTCAGTGTTGCGTCG +
Preference number: 2 (lower is better)
Translates to: DFYNHRGLACVSYLAGERTVRRS*DVSVAS
Trigger: CGACGCAACACTGACGTCCCAGCTGCGACGTACTGT...CCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGAAGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
3UTR-3UTR CCA 90 bp AAGACTGAAAACCAAGGCAAGCCCCGTAGGGAGATAAGGACTAAGCCAGGGACCCCAGGTCTCCTTAGCTaGGCCAGTTCAGTGAGATCT +
Preference number: 2 (lower is better)
Translates to: KTENQGKPRREIRTKPGTPGLLS*ASSVRS
Trigger: AGATCTCACTGAACTGGCCCAGCTAAGGAGACCTGG...GGTCCCTGGCTTAGTCCTTATCTCCCTACGGGGCTTGCCTTGGTTTTCAGTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
3UTR-3UTR CCA 90 bp CCCTGCCCCAAAGCCAGGTGCAAAATCCACAACAAGGATCCTCCCTCTGAGGTGCAGATGGGCCAGCCATaGTTGAAATATAAAGCTGGC +
Preference number: 2 (lower is better)
Translates to: PCPKARCKIHNKDPPSEVQMGQP*LKYKAG
Trigger: GCCAGCTTTATATTTCAACCATGGCTGGCCCATCTG...CACCTCAGAGGGAGGATCCTTGTTGTGGATTTTGCACCTGGCTTTGGGGCAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
3UTR CAA 90 bp TCTCAGCTTTGTCCTGGGACAGGGGAGGGCTTTGCAAATGCAGTTTaGATCTTTCAGGGTCTGCCCCATGAAGCCTCCTTACCATGGCTA +
Preference number: 2 (lower is better)
Translates to: SQLCPGTGEGFANAV*IFQGLPHEASLPWL
Trigger: TAGCCATGGTAAGGAGGCTTCATGGGGCAGACCCTGAAAGATCAAAACTGCATTTGCAAAGCCCTCCCCTGTCCCAGGACAAAGCTGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
3UTR CAA 90 bp TGTGGTCTTGGGGTAATTTCTGGGCACAAGCTCAGAGTTCAGCTGTaGACTGAGAGGGAGGTCTCCAAGCCAAGGTCTTATGCAGAGCTG +
Preference number: 2 (lower is better)
Translates to: CGLGVISGHKLRVQL*TEREVSKPRSYAEL
Trigger: CAGCTCTGCATAAGACCTTGGCTTGGAGACCTCCCTCTCAGTCAACAGCTGAACTCTGAGCTTGTGCCCAGAAATTACCCCAAGACCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
3UTR-3UTR TCA 90 bp CAGAACCAGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTCGGAGAATCCAGAATaGAGGCCCCTTCTTAATGGT +
Preference number: 2 (lower is better)
Translates to: QNQGGRDFYNHRGLACVSSENPE*RPLLNG
Trigger: ACCATTAAGAAGGGGCCTTCATTCTGGATTCTCCGA...AGAAACGCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCTGGTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
3UTR-3UTR TCA 90 bp GAGGCGGGAGAGAGGAAGGTAGGTTTTGCAGCCCAGTGTCAAGATCCAGAAAGTTTCTCGGAAAATGGTTaGCTGTGCGTGTCTTGCTGC +
Preference number: 2 (lower is better)
Translates to: EAGERKVGFAAQCQDPESFSENG*LCVSCC
Trigger: GCAGCAAGACACGCACAGTCAACCATTTTCCGAGAA...ACTTTCTGGATCTTGACACTGGGCTGCAAAACCTACCTTCCTCTCTCCCGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
3UTR-3UTR GCA 90 bp GGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTGAGCAAGGGATTATACTGGGACGTCAGTGTTaGGTCGGAGAATCCAGAATG +
Preference number: 2 (lower is better)
Translates to: GLACVSYLAGERGEQGIILGRQC*VGESRM
Trigger: CATTCTGGATTCTCCGACGCAACACTGACGTCCCAG...TATAATCCCTTGCTCACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
3UTR-3UTR GCA 90 bp AAATGTAGGTGTTCAGATGTCGGTTGTTGCTGTCAGCCAACTGCTCTGCCAGCCCTGGGACGTCAGTGTTaGGTCGGAGAATCCAGAATG +
Preference number: 2 (lower is better)
Translates to: KCRCSDVGCCCQPTALPALGRQC*VGESRM
Trigger: CATTCTGGATTCTCCGACGCAACACTGACGTCCCAG...GGCTGGCAGAGCAGTTGGCTGACAGCAACAACCGACATCTGAACACCTACATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
3UTR-3UTR GCA 90 bp AACGTGCAGAACCAGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCGCAGCAGTGCAAGGATaGGGTGTTTCCTGTATATAT +
Preference number: 2 (lower is better)
Translates to: NVQNQGGRDFYNHRGLACAAVQG*GVSCIY
Trigger: ATATATACAGGAAACACCGCATCCTTGCACTGCTGC...GCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCTGGTTCTGCACGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
3UTR-3UTR GCA 90 bp TGCTGGAGAAGAACAAATGGAATTGCTCGTCTGCTAACTGTAACGTGCAGAACCTTGCTGTCAGCCAACTaGTCTGCCAGCCCCAGCAGC +
Preference number: 2 (lower is better)
Translates to: CWRRTNGIARLLTVTCRTLLSAN*SASPSS
Trigger: GCTGCTGGGGCTGGCAGAGCAGTTGGCTGACAGCAA...GGTTCTGCACGTTACAGTTAGCAGACGAGCAATTCCATTTGTTCTTCTCCAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
3UTR-3UTR GCA 90 bp CCGCCCTCAGGGACTTTTTCCACTATGCTACATGGCCTCCTGGGTGGAGAGGTGGCAAGTGTTTTCCTTTaGATTCAAGTGGGCCTTAGA +
Preference number: 2 (lower is better)
Translates to: PPSGTFSTMLHGLLGGEVASVFL*IQVGLR
Trigger: TCTAAGGCCCACTTGAATGCAAAGGAAAACACTTGC...CACCTCTCCACCCAGGAGGCCATGTAGCATAGTGGAAAAAGTCCCTGAGGGCGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
3UTR-3UTR CCA 90 bp TACGTCGCAGCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTAATGGTTCTCTaGCTTGGGTTGGACCAGAAA +
Preference number: 2 (lower is better)
Translates to: YVAAGTSVLRRRIQNEGPFLMVL*LGLDQK
Trigger: TTTCTGGTCCAACCCAAGCCAGAGAACCATTAAGAA...GGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGCTGCGACGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
3UTR-3UTR TCA 90 bp GAAGGTGTCTTGAACTGGCATTTTGGGGACGACATCTGTGTTGCTTCTTTCTTGCCAGTCTCTCATCAGTaGCAGTACGTCGCAGCTGGG +
Preference number: 2 (lower is better)
Translates to: EGVLNWHFGDDICVASFLPVSHQ*QYVAAG
Trigger: CCCAGCTGCGACGTACTGTCACTGATGAGAGACTGG...CAAGAAAGAAGCAACACAGATGTCGTCCCCAAAATGCCAGTTCAAGACACCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
3UTR-3UTR GCA 90 bp AGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGGGGTTGGACCAGAAATaGCAGGATCTCTTCACAGAG +
Preference number: 2 (lower is better)
Translates to: RAGGTSTIIVVWLAFLIWGLDQK*QDLFTE
Trigger: CTCTGTGAAGAGATCCTGGCATTTCTGGTCCAACCC...CCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
3UTR-3UTR GCA 90 bp GACTTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGCTGGGACGTCAGTGTTaGGTCGGAGAATCCAGAATG +
Preference number: 2 (lower is better)
Translates to: DFYNHRGLACVSYLAGERLGRQC*VGESRM
Trigger: CATTCTGGATTCTCCGACGCAACACTGACGTCCCAG...CCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGAAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
3UTR-3UTR GCA 90 bp AGGTGTATGTCATCACTGACAAGCCAAAGGGACGCATCTAACCTGGGCCGCCTGGCAGCAGTGCAAGGATaGGGTGTTTCCTGTATATAT +
Preference number: 2 (lower is better)
Translates to: RCMSSLTSQRDASNLGRLAAVQG*GVSCIY
Trigger: ATATATACAGGAAACACCGCATCCTTGCACTGCTGC...CAGGCGGCCCAGGTTAGATGCGTCCCTTTGGCTTGTCAGTGATGACATACACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
3UTR-3UTR GCA 90 bp GCATTCAAGTGGGCCTTAGAGATGCTGGAGAAGAACAAATGGAATTGCTCGTCTCAGCCCCAGCAGCAGTaGAAGGATGCGGTGTTTCCT +
Preference number: 2 (lower is better)
Translates to: AFKWALEMLEKNKWNCSSQPQQQ*KDAVFP
Trigger: AGGAAACACCGCATCCTTGCACTGCTGCTGGGGCTG...AGACGAGCAATTCCATTTGTTCTTCTCCAGCATCTCTAAGGCCCACTTGAATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
3UTR-3UTR GCA 90 bp GAAGGTGTCTTGAACTGGCATTTTGGGGACGACATCTGTGTTGCTTCTTTCTTGCAGCCCCAGCAGCAGTaGAAGGATGCGGTGTTTCCT +
Preference number: 2 (lower is better)
Translates to: EGVLNWHFGDDICVASFLQPQQQ*KDAVFP
Trigger: AGGAAACACCGCATCCTTGCACTGCTGCTGGGGCTG...CAAGAAAGAAGCAACACAGATGTCGTCCCCAAAATGCCAGTTCAAGACACCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
3UTR-3UTR GCA 90 bp GTTTTCCTTTGCATTCAAGTGGGCCTTAGAGATGCTGGAGAAGAACAAATGGAAGTCAGCCAACTGCTCTaGCAGCCCCAGCAGCAGTGC +
Preference number: 2 (lower is better)
Translates to: VFLCIQVGLRDAGEEQMEVSQLL*QPQQQC
Trigger: GCACTGCTGCTGGGGCTGGCAGAGCAGTTGGCTGAC...TTCCATTTGTTCTTCTCCAGCATCTCTAAGGCCCACTTGAATGCAAAGGAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
3UTR-3UTR GCA 90 bp TTTCTTTTTCTCATTTCAAAGGAGAGTCATCTGCAGTGGCCCTCAGAAGGACCATTGCTGTCAGCCAACTaGTCTGCCAGCCCCAGCAGC +
Preference number: 2 (lower is better)
Translates to: FLFLISKESHLQWPSEGPLLSAN*SASPSS
Trigger: GCTGCTGGGGCTGGCAGAGCAGTTGGCTGACAGCAA...TGGTCCTTCTGAGGGCCACTGCAGATGACTCTCCTTTGAAATGAGAAAAAGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
3UTR-3UTR GCA 90 bp GGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTGAGCAAGGGATTATATCAGATGTCGGTTGTTaGTGTCAGCCAACTGCTCTG +
Preference number: 2 (lower is better)
Translates to: GLACVSYLAGERGEQGIISDVGC*CQPTAL
Trigger: CAGAGCAGTTGGCTGACAGCAACAACCGACATCTGA...TATAATCCCTTGCTCACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
3UTR-3UTR GCA 90 bp TTCAGTGTGCTCAGGACTCCTGGTTCCTGCAAAGATGAGTTCCTAGACCGAAGTCATCGTGGTCTGGCTTaGGTTTCTTATTTGGCGGGG +
Preference number: 2 (lower is better)
Translates to: FSVLRTPGSCKDEFLDRSHRGLA*VSYLAG
Trigger: CCCCGCCAAATAAGAAACGCAAGCCAGACCACGATG...ACTTCGGTCTAGGAACTCATCTTTGCAGGAACCAGGAGTCCTGAGCACACTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
3UTR-3UTR GCA 90 bp AAGACTGAAAACCAAGGCAAGCCCCGTAGGGAGATAAGGACTAAGCCAGGGACCGTGTTGCTTCTTTCTTaGCAAACCCACACCTCTCCA +
Preference number: 2 (lower is better)
Translates to: KTENQGKPRREIRTKPGTVLLLS*QTHTSP
Trigger: TGGAGAGGTGTGGGTTTGGCAAGAAAGAAGCAACAC...GGTCCCTGGCTTAGTCCTTATCTCCCTACGGGGCTTGCCTTGGTTTTCAGTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
3UTR-3UTR GCA 90 bp AAGACTGAAAACCAAGGCAAGCCCCGTAGGGAGATAAGGACTAAGCCAGGGACCGGACGACATCTGTGTTaGTTCTTTCTTGCCAAACCC +
Preference number: 2 (lower is better)
Translates to: KTENQGKPRREIRTKPGTGRHLC*FFLAKP
Trigger: GGGTTTGGCAAGAAAGAAGCAACACAGATGTCGTCC...GGTCCCTGGCTTAGTCCTTATCTCCCTACGGGGCTTGCCTTGGTTTTCAGTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
3UTR-3UTR GCA 90 bp CTCCCCTCCCACCTTCTTCAGCCTGAGAATAGTCCCTGGCACAAGCAGGTAATCGGAGGGCTTTGCAAATaGAGTTTTGATCTTTCAGGG +
Preference number: 2 (lower is better)
Translates to: LPSHLLQPENSPWHKQVIGGLCK*SFDLSG
Trigger: CCCTGAAAGATCAAAACTGCATTTGCAAAGCCCTCC...GATTACCTGCTTGTGCCAGGGACTATTCTCAGGCTGAAGAAGGTGGGAGGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
3UTR-3UTR CCA 90 bp CTGCTCTGCCAGCCCCAGCAGCAGTGCAAGGATGCGGTGTTTCCTGTATATATAAATGGTTCTCTGGCTTaGGTTGGACCAGAAATGCCA +
Preference number: 2 (lower is better)
Translates to: LLCQPQQQCKDAVFPVYINGSLA*VGPEMP
Trigger: TGGCATTTCTGGTCCAACCCAAGCCAGAGAACCATT...TATATATACAGGAAACACCGCATCCTTGCACTGCTGCTGGGGCTGGCAGAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
3UTR-3UTR CCA 90 bp ACAAATGGAATTGCTCGTCTGCTAACTGTAACGTGCAGAACCAGGGCGGGAGGGAATGGTTCTCTGGCTTaGGTTGGACCAGAAATGCCA +
Preference number: 2 (lower is better)
Translates to: TNGIARLLTVTCRTRAGGNGSLA*VGPEMP
Trigger: TGGCATTTCTGGTCCAACCCAAGCCAGAGAACCATT...CCCTCCCGCCCTGGTTCTGCACGTTACAGTTAGCAGACGAGCAATTCCATTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
3UTR-3UTR CCA 90 bp TGCTGGAGAAGAACAAATGGAATTGCTCGTCTGCTAACTGTAACGTGCAGAACCACAGTACGTCGCAGCTaGGACGTCAGTGTTGCGTCG +
Preference number: 2 (lower is better)
Translates to: CWRRTNGIARLLTVTCRTTVRRS*DVSVAS
Trigger: CGACGCAACACTGACGTCCCAGCTGCGACGTACTGT...GGTTCTGCACGTTACAGTTAGCAGACGAGCAATTCCATTTGTTCTTCTCCAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
3UTR-3UTR CCA 90 bp GAGGCGGGAGAGAGGAAGGTAGGTTTTGCAGCCCAGTGTCAAGATCCAGAAAGTTCCTTTGCATTCAAGTaGGCCTTAGAGATGCTGGAG +
Preference number: 2 (lower is better)
Translates to: EAGERKVGFAAQCQDPESSFAFK*ALEMLE
Trigger: CTCCAGCATCTCTAAGGCCCACTTGAATGCAAAGGA...ACTTTCTGGATCTTGACACTGGGCTGCAAAACCTACCTTCCTCTCTCCCGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
3UTR-3UTR CCA 90 bp CCAGGATGGTCACCCAGAACTCCTAACCGCCCTCAGGGACTTTTTCCACTATGCAGTTGGTTATTACAATaGGGTCAGGGAAGGGCAGAA +
Preference number: 2 (lower is better)
Translates to: PGWSPRTPNRPQGLFPLCSWLLQ*GQGRAE
Trigger: TTCTGCCCTTCCCTGACCCCATTGTAATAACCAACT...GCATAGTGGAAAAAGTCCCTGAGGGCGGTTAGGAGTTCTGGGTGACCATCCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
3UTR-3UTR CCA 90 bp CCGCCCTCAGGGACTTTTTCCACTATGCTACATGGCCTCCTGGGTGGAGAGGTGATTGTAGAAAGAACCTaGTGTATGGAAAGTGTGCTG +
Preference number: 2 (lower is better)
Translates to: PPSGTFSTMLHGLLGGEVIVERT*CMESVL
Trigger: CAGCACACTTTCCATACACCAGGTTCTTTCTACAAT...CACCTCTCCACCCAGGAGGCCATGTAGCATAGTGGAAAAAGTCCCTGAGGGCGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
3UTR-3UTR TCA 90 bp GGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTGAGCAAGGGATTATATCGGAGAATCCAGAATaGAGGCCCCTTCTTAATGGT +
Preference number: 2 (lower is better)
Translates to: GLACVSYLAGERGEQGIISENPE*RPLLNG
Trigger: ACCATTAAGAAGGGGCCTTCATTCTGGATTCTCCGA...TATAATCCCTTGCTCACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
3UTR-3UTR TCA 90 bp ACTCTCAAGAAGGGCAGGAAGAAGGTTCTGTGGCTTTTCCACCAGGATTGTAGAAGGGAGAAGGTGTCTTaGACTGGCATTTTGGGGACG +
Preference number: 2 (lower is better)
Translates to: TLKKGRKKVLWLFHQDCRREKVS*TGILGT
Trigger: CGTCCCCAAAATGCCAGTTCAAGACACCTTCTCCCT...TCTACAATCCTGGTGGAAAAGCCACAGAACCTTCTTCCTGCCCTTCTTGAGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
3UTR-3UTR TCA 90 bp TCCCACCTTCTTCAGCCTGAGAATAGTCCCTGGCACAAGCAGGTAATCAGTAAAGCAATGCCAAGCTTGTaGTGGGAGCTTCTTGAAGGG +
Preference number: 2 (lower is better)
Translates to: SHLLQPENSPWHKQVISKAMPSL*WELLEG
Trigger: CCCTTCAAGAAGCTCCCATCACAAGCTTGGCATTGC...TTTACTGATTACCTGCTTGTGCCAGGGACTATTCTCAGGCTGAAGAAGGTGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
3UTR-3UTR TCA 90 bp TTCAGTGTGCTCAGGACTCCTGGTTCCTGCAAAGATGAGTTCCTAGACCGAAGTGGTGTATGTCATCACTaGCAAGCCAAAGGGACGCAT +
Preference number: 2 (lower is better)
Translates to: FSVLRTPGSCKDEFLDRSGVCHH*QAKGTH
Trigger: ATGCGTCCCTTTGGCTTGTCAGTGATGACATACACC...ACTTCGGTCTAGGAACTCATCTTTGCAGGAACCAGGAGTCCTGAGCACACTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
3UTR-3UTR GCA 90 bp CCTCCTACAAGCTGCACCTTCATAATGAGAAACCATAAGCATACAATGTCTACTGTCAGCCAACTGCTCTaGCAGCCCCAGCAGCAGTGC +
Preference number: 2 (lower is better)
Translates to: PPTSCTFIMRNHKHTMSTVSQLL*QPQQQC
Trigger: GCACTGCTGCTGGGGCTGGCAGAGCAGTTGGCTGAC...AGTAGACATTGTATGCTTATGGTTTCTCATTATGAAGGTGCAGCTTGTAGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
3UTR-3UTR GCA 90 bp GTTTTCCTTTGCATTCAAGTGGGCCTTAGAGATGCTGGAGAAGAACAAATGGAATTGCTGTCAGCCAACTaGTCTGCCAGCCCCAGCAGC +
Preference number: 2 (lower is better)
Translates to: VFLCIQVGLRDAGEEQMELLSAN*SASPSS
Trigger: GCTGCTGGGGCTGGCAGAGCAGTTGGCTGACAGCAA...TTCCATTTGTTCTTCTCCAGCATCTCTAAGGCCCACTTGAATGCAAAGGAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
3UTR-3UTR GCA 90 bp TTTCTTTTTCTCATTTCAAAGGAGAGTCATCTGCAGTGGCCCTCAGAAGGACCACTGCTAACTGTAACGTaGAGAACCAGGGCGGGAGGG +
Preference number: 2 (lower is better)
Translates to: FLFLISKESHLQWPSEGPLLTVT*RTRAGG
Trigger: CCCTCCCGCCCTGGTTCTGCACGTTACAGTTAGCAG...TGGTCCTTCTGAGGGCCACTGCAGATGACTCTCCTTTGAAATGAGAAAAAGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
3UTR-3UTR CCA 90 bp CCACCATCTTCTACAATGGCTGAGAGCACCACCTCCCTTTGGATATGGAGTTGGCTTGAACTGGCATTTTaGGGACGACATCTGTGTTGC +
Preference number: 2 (lower is better)
Translates to: PPSSTMAESTTSLWIWSWLELAF*GRHLCC
Trigger: GCAACACAGATGTCGTCCCCAAAATGCCAGTTCAAG...CCAACTCCATATCCAAAGGGAGGTGGTGCTCTCAGCCATTGTAGAAGATGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
3UTR-3UTR CCA 90 bp CCAGGATGGTCACCCAGAACTCCTAACCGCCCTCAGGGACTTTTTCCACTATGCAGCACCACCTCCCTTTaGATATGGAGTTGGTTATTA +
Preference number: 2 (lower is better)
Translates to: PGWSPRTPNRPQGLFPLCSTTSL*IWSWLL
Trigger: TAATAACCAACTCCATATCCAAAGGGAGGTGGTGCT...GCATAGTGGAAAAAGTCCCTGAGGGCGGTTAGGAGTTCTGGGTGACCATCCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
3UTR-3UTR TCA 90 bp CCACCATCTTCTACAATGGCTGAGAGCACCACCTCCCTTTGGATATGGAGTTGGAGCCGAGACAGAAAATaGCAGCAAGACATTGAGAGT +
Preference number: 2 (lower is better)
Translates to: PPSSTMAESTTSLWIWSWSRDRK*QQDIES
Trigger: ACTCTCAATGTCTTGCTGTCATTTTCTGTCTCGGCT...CCAACTCCATATCCAAAGGGAGGTGGTGCTCTCAGCCATTGTAGAAGATGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
3UTR-3UTR TCA 90 bp CATCTTCTACAATGGCTGAGAGCACCACCTCCCTTTGGATATGGAGTTGGTTATAGGGAGAAGGTGTCTTaGACTGGCATTTTGGGGACG +
Preference number: 2 (lower is better)
Translates to: HLLQWLRAPPPFGYGVGYREKVS*TGILGT
Trigger: CGTCCCCAAAATGCCAGTTCAAGACACCTTCTCCCT...ATAACCAACTCCATATCCAAAGGGAGGTGGTGCTCTCAGCCATTGTAGAAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
3UTR-3UTR GCA 90 bp AGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGGCAGCAGTGCAAGGATaGGGTGTTTCCTGTATATAT +
Preference number: 2 (lower is better)
Translates to: RAGGTSTIIVVWLAFLIWAAVQG*GVSCIY
Trigger: ATATATACAGGAAACACCGCATCCTTGCACTGCTGC...CCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
3UTR-3UTR CCA 90 bp GCCAGTTCAGTGAGATCTAGGAACCTCAGGATACATCAATCACAGTCAGATAATACAGTACGTCGCAGCTaGGACGTCAGTGTTGCGTCG +
Preference number: 2 (lower is better)
Translates to: ASSVRSRNLRIHQSQSDNTVRRS*DVSVAS
Trigger: CGACGCAACACTGACGTCCCAGCTGCGACGTACTGT...ATTATCTGACTGTGATTGATGTATCCTGAGGTTCCTAGATCTCACTGAACTGGC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
3UTR-3UTR CCA 90 bp GTTTTCCTTTGCATTCAAGTGGGCCTTAGAGATGCTGGAGAAGAACAAATGGAAACAGTACGTCGCAGCTaGGACGTCAGTGTTGCGTCG +
Preference number: 2 (lower is better)
Translates to: VFLCIQVGLRDAGEEQMETVRRS*DVSVAS
Trigger: CGACGCAACACTGACGTCCCAGCTGCGACGTACTGT...TTCCATTTGTTCTTCTCCAGCATCTCTAAGGCCCACTTGAATGCAAAGGAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
3UTR-3UTR CCA 90 bp ACAAATGGAATTGCTCGTCTGCTAACTGTAACGTGCAGAACCAGGGCGGGAGGGCTTCTACAATCATCGTaGTCTGGCTTGCGTTTCTTA +
Preference number: 2 (lower is better)
Translates to: TNGIARLLTVTCRTRAGGLLQSS*SGLRFL
Trigger: TAAGAAACGCAAGCCAGACCACGATGATTGTAGAAG...CCCTCCCGCCCTGGTTCTGCACGTTACAGTTAGCAGACGAGCAATTCCATTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
3UTR-3UTR CCA 90 bp AGGTGTATGTCATCACTGACAAGCCAAAGGGACGCATCTAACCTGGGCCGCCTGCTTTGGATATGGAGTTaGTTATTACAATGGGGTCAG +
Preference number: 2 (lower is better)
Translates to: RCMSSLTSQRDASNLGRLLWIWS*LLQWGQ
Trigger: CTGACCCCATTGTAATAACCAACTCCATATCCAAAG...CAGGCGGCCCAGGTTAGATGCGTCCCTTTGGCTTGTCAGTGATGACATACACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
3UTR-3UTR CCA 90 bp CCAGGATGGTCACCCAGAACTCCTAACCGCCCTCAGGGACTTTTTCCACTATGCAGGAAAAGGCTTAGCTaGGAATTTTTAGACAGTCAG +
Preference number: 2 (lower is better)
Translates to: PGWSPRTPNRPQGLFPLCRKRLS*EFLDSQ
Trigger: CTGACTGTCTAAAAATTCCCAGCTAAGCCTTTTCCT...GCATAGTGGAAAAAGTCCCTGAGGGCGGTTAGGAGTTCTGGGTGACCATCCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
3UTR-3UTR TCA 90 bp CCTCCTACAAGCTGCACCTTCATAATGAGAAACCATAAGCATACAATGTCTACTCCAGTCTCTCATCAGTaGCAGTACGTCGCAGCTGGG +
Preference number: 2 (lower is better)
Translates to: PPTSCTFIMRNHKHTMSTPVSHQ*QYVAAG
Trigger: CCCAGCTGCGACGTACTGTCACTGATGAGAGACTGG...AGTAGACATTGTATGCTTATGGTTTCTCATTATGAAGGTGCAGCTTGTAGGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
3UTR-3UTR TCA 90 bp CATCTTCTACAATGGCTGAGAGCACCACCTCCCTTTGGATATGGAGTTGGTTATACAGTATTACTACACTaGACCCGTCAGCCCCTACTG +
Preference number: 2 (lower is better)
Translates to: HLLQWLRAPPPFGYGVGYTVLLH*TRQPLL
Trigger: CAGTAGGGGCTGACGGGTTCAGTGTAGTAATACTGT...ATAACCAACTCCATATCCAAAGGGAGGTGGTGCTCTCAGCCATTGTAGAAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
3UTR-3UTR TCA 90 bp AGGTTGAAGACAGACAAGACAAACGTCTCTATTCTCTACAAAGAGAAGGATGGGATTCTGCTGCCCCGCTaGACTTCCCATTTGCCCAGA +
Preference number: 2 (lower is better)
Translates to: RLKTDKTNVSILYKEKDGILLPR*TSHLPR
Trigger: TCTGGGCAAATGGGAAGTTCAGCGGGGCAGCAGAAT...CCCATCCTTCTCTTTGTAGAGAATAGAGACGTTTGTCTTGTCTGTCTTCAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
3UTR-3UTR GCA 90 bp TGCTGGAGAAGAACAAATGGAATTGCTCGTCTGCTAACTGTAACGTGCAGAACCTCAGATGTCGGTTGTTaGTGTCAGCCAACTGCTCTG +
Preference number: 2 (lower is better)
Translates to: CWRRTNGIARLLTVTCRTSDVGC*CQPTAL
Trigger: CAGAGCAGTTGGCTGACAGCAACAACCGACATCTGA...GGTTCTGCACGTTACAGTTAGCAGACGAGCAATTCCATTTGTTCTTCTCCAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
3UTR-3UTR GCA 90 bp CTCCCCTCCCACCTTCTTCAGCCTGAGAATAGTCCCTGGCACAAGCAGGTAATCAAGAACAAATGGAATTaGTCGTCTGCTAACTGTAAC +
Preference number: 2 (lower is better)
Translates to: LPSHLLQPENSPWHKQVIKNKWN*SSANCN
Trigger: GTTACAGTTAGCAGACGAGCAATTCCATTTGTTCTT...GATTACCTGCTTGTGCCAGGGACTATTCTCAGGCTGAAGAAGGTGGGAGGGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
3UTR-3UTR GCA 90 bp TTCAGTGTGCTCAGGACTCCTGGTTCCTGCAAAGATGAGTTCCTAGACCGAAGTGACAGGGGAGGGCTTTaGAAATGCAGTTTTGATCTT +
Preference number: 2 (lower is better)
Translates to: FSVLRTPGSCKDEFLDRSDRGGL*KCSFDL
Trigger: AAGATCAAAACTGCATTTGCAAAGCCCTCCCCTGTC...ACTTCGGTCTAGGAACTCATCTTTGCAGGAACCAGGAGTCCTGAGCACACTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
3UTR-3UTR GCA 90 bp TTCAGTGTGCTCAGGACTCCTGGTTCCTGCAAAGATGAGTTCCTAGACCGAAGTGCTGAACTTCCCATTTaGCCAGAGAAGCAAATGCTA +
Preference number: 2 (lower is better)
Translates to: FSVLRTPGSCKDEFLDRSAELPI*PEKQML
Trigger: TAGCATTTGCTTCTCTGGGCAAATGGGAAGTTCAGC...ACTTCGGTCTAGGAACTCATCTTTGCAGGAACCAGGAGTCCTGAGCACACTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
3UTR-3UTR CCA 90 bp AAATGTAGGTGTTCAGATGTCGGTTGTTGCTGTCAGCCAACTGCTCTGCCAGCCTTCTTAATGGTTCTCTaGCTTGGGTTGGACCAGAAA +
Preference number: 2 (lower is better)
Translates to: KCRCSDVGCCCQPTALPAFLMVL*LGLDQK
Trigger: TTTCTGGTCCAACCCAAGCCAGAGAACCATTAAGAA...GGCTGGCAGAGCAGTTGGCTGACAGCAACAACCGACATCTGAACACCTACATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
3UTR-3UTR TCA 90 bp TGCTGGAGAAGAACAAATGGAATTGCTCGTCTGCTAACTGTAACGTGCAGAACCTCGGAGAATCCAGAATaGAGGCCCCTTCTTAATGGT +
Preference number: 2 (lower is better)
Translates to: CWRRTNGIARLLTVTCRTSENPE*RPLLNG
Trigger: ACCATTAAGAAGGGGCCTTCATTCTGGATTCTCCGA...GGTTCTGCACGTTACAGTTAGCAGACGAGCAATTCCATTTGTTCTTCTCCAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
3UTR-3UTR TCA 90 bp AGGTTGAAGACAGACAAGACAAACGTCTCTATTCTCTACAAAGAGAAGGATGGGAGGGAGAAGGTGTCTTaGACTGGCATTTTGGGGACG +
Preference number: 2 (lower is better)
Translates to: RLKTDKTNVSILYKEKDGREKVS*TGILGT
Trigger: CGTCCCCAAAATGCCAGTTCAAGACACCTTCTCCCT...CCCATCCTTCTCTTTGTAGAGAATAGAGACGTTTGTCTTGTCTGTCTTCAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
3UTR-3UTR GCA 90 bp CCACCAGTTCTTCAATTTGTCTGCAAAGGAAATGTAGGTGTTCAGATGTCGGTTCTGGGACGTCAGTGTTaGGTCGGAGAATCCAGAATG +
Preference number: 2 (lower is better)
Translates to: PPVLQFVCKGNVGVQMSVLGRQC*VGESRM
Trigger: CATTCTGGATTCTCCGACGCAACACTGACGTCCCAG...AACCGACATCTGAACACCTACATTTCCTTTGCAGACAAATTGAAGAACTGGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
3UTR-3UTR GCA 90 bp ACTCTCAAGAAGGGCAGGAAGAAGGTTCTGTGGCTTTTCCACCAGGATTGTAGAGCAGCAGTGCAAGGATaGGGTGTTTCCTGTATATAT +
Preference number: 2 (lower is better)
Translates to: TLKKGRKKVLWLFHQDCRAAVQG*GVSCIY
Trigger: ATATATACAGGAAACACCGCATCCTTGCACTGCTGC...TCTACAATCCTGGTGGAAAAGCCACAGAACCTTCTTCCTGCCCTTCTTGAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
3UTR-3UTR GCA 90 bp CTCCCCTCCCACCTTCTTCAGCCTGAGAATAGTCCCTGGCACAAGCAGGTAATCGTTCTTCAATTTGTCTaGAAAGGAAATGTAGGTGTT +
Preference number: 2 (lower is better)
Translates to: LPSHLLQPENSPWHKQVIVLQFV*KGNVGV
Trigger: AACACCTACATTTCCTTTGCAGACAAATTGAAGAAC...GATTACCTGCTTGTGCCAGGGACTATTCTCAGGCTGAAGAAGGTGGGAGGGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
3UTR-3UTR CCA 90 bp TTCAGTGTGCTCAGGACTCCTGGTTCCTGCAAAGATGAGTTCCTAGACCGAAGTCTTCTACAATCATCGTaGTCTGGCTTGCGTTTCTTA +
Preference number: 2 (lower is better)
Translates to: FSVLRTPGSCKDEFLDRSLLQSS*SGLRFL
Trigger: TAAGAAACGCAAGCCAGACCACGATGATTGTAGAAG...ACTTCGGTCTAGGAACTCATCTTTGCAGGAACCAGGAGTCCTGAGCACACTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
3UTR-3UTR CCA 90 bp CCTTACCATGGCTACTTTGGCCTGAGAAGAAGAAATGATTCAGAACAAGGAAGACCAGGTCTCCTTAGCTaGGCCAGTTCAGTGAGATCT +
Preference number: 2 (lower is better)
Translates to: PYHGYFGLRRRNDSEQGRPGLLS*ASSVRS
Trigger: AGATCTCACTGAACTGGCCCAGCTAAGGAGACCTGG...TCTTCCTTGTTCTGAATCATTTCTTCTTCTCAGGCCAAAGTAGCCATGGTAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
3UTR-3UTR CCA 90 bp ACTCTCAAGAAGGGCAGGAAGAAGGTTCTGTGGCTTTTCCACCAGGATTGTAGAAGTTGGTTATTACAATaGGGTCAGGGAAGGGCAGAA +
Preference number: 2 (lower is better)
Translates to: TLKKGRKKVLWLFHQDCRSWLLQ*GQGRAE
Trigger: TTCTGCCCTTCCCTGACCCCATTGTAATAACCAACT...TCTACAATCCTGGTGGAAAAGCCACAGAACCTTCTTCCTGCCCTTCTTGAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
3UTR-3UTR TCA 90 bp CTTTTCTTTTTCTCATTTCAAAGGAGAGTCATCTGCAGTGGCCCTCAGAAGGACTCGGAGAATCCAGAATaGAGGCCCCTTCTTAATGGT +
Preference number: 2 (lower is better)
Translates to: LFFFSFQRRVICSGPQKDSENPE*RPLLNG
Trigger: ACCATTAAGAAGGGGCCTTCATTCTGGATTCTCCGA...GTCCTTCTGAGGGCCACTGCAGATGACTCTCCTTTGAAATGAGAAAAAGAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
3UTR-3UTR TCA 90 bp CCTTACCATGGCTACTTTGGCCTGAGAAGAAGAAATGATTCAGAACAAGGAAGATTCTCGGAAAATGGTTaGCTGTGCGTGTCTTGCTGC +
Preference number: 2 (lower is better)
Translates to: PYHGYFGLRRRNDSEQGRFSENG*LCVSCC
Trigger: GCAGCAAGACACGCACAGTCAACCATTTTCCGAGAA...TCTTCCTTGTTCTGAATCATTTCTTCTTCTCAGGCCAAAGTAGCCATGGTAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
3UTR-3UTR TCA 90 bp CCTTACCATGGCTACTTTGGCCTGAGAAGAAGAAATGATTCAGAACAAGGAAGAATGACAGCAAGACATTaGGAGTTGAGGGTGAGGGGA +
Preference number: 2 (lower is better)
Translates to: PYHGYFGLRRRNDSEQGRMTARH*ELRVRG
Trigger: TCCCCTCACCCTCAACTCTCAATGTCTTGCTGTCAT...TCTTCCTTGTTCTGAATCATTTCTTCTTCTCAGGCCAAAGTAGCCATGGTAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
3UTR-3UTR GCA 90 bp TATATATATATGCTTTTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGCAGGGGTTGGACCAGAAATaGCAGGATCTCTTCACAGAG +
Preference number: 2 (lower is better)
Translates to: YIYMLFPSQSLISDSTSQGLDQK*QDLFTE
Trigger: CTCTGTGAAGAGATCCTGGCATTTCTGGTCCAACCC...CTGCGACGTACTGTCACTGATGAGAGACTGGGAAGGGAAAAGCATATATATATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
3UTR-3UTR GCA 90 bp AGGTTGAAGACAGACAAGACAAACGTCTCTATTCTCTACAAAGAGAAGGATGGGGGGTTGGACCAGAAATaGCAGGATCTCTTCACAGAG +
Preference number: 2 (lower is better)
Translates to: RLKTDKTNVSILYKEKDGGLDQK*QDLFTE
Trigger: CTCTGTGAAGAGATCCTGGCATTTCTGGTCCAACCC...CCCATCCTTCTCTTTGTAGAGAATAGAGACGTTTGTCTTGTCTGTCTTCAACCT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
3UTR-3UTR GCA 90 bp ACCAGTTCTTCAATTTGTCTGCAAAGGAAATGTAGGTGTTCAGATGTCGGTTGTCTGGGACGTCAGTGTTaGGTCGGAGAATCCAGAATG +
Preference number: 2 (lower is better)
Translates to: TSSSICLQRKCRCSDVGCLGRQC*VGESRM
Trigger: CATTCTGGATTCTCCGACGCAACACTGACGTCCCAG...ACAACCGACATCTGAACACCTACATTTCCTTTGCAGACAAATTGAAGAACTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
3UTR-3UTR GCA 90 bp AAGACTGAAAACCAAGGCAAGCCCCGTAGGGAGATAAGGACTAAGCCAGGGACCGTTCTTCAATTTGTCTaGAAAGGAAATGTAGGTGTT +
Preference number: 2 (lower is better)
Translates to: KTENQGKPRREIRTKPGTVLQFV*KGNVGV
Trigger: AACACCTACATTTCCTTTGCAGACAAATTGAAGAAC...GGTCCCTGGCTTAGTCCTTATCTCCCTACGGGGCTTGCCTTGGTTTTCAGTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
3UTR-3UTR GCA 90 bp CCTCCTACAAGCTGCACCTTCATAATGAGAAACCATAAGCATACAATGTCTACTCATCGTGGTCTGGCTTaGGTTTCTTATTTGGCGGGG +
Preference number: 2 (lower is better)
Translates to: PPTSCTFIMRNHKHTMSTHRGLA*VSYLAG
Trigger: CCCCGCCAAATAAGAAACGCAAGCCAGACCACGATG...AGTAGACATTGTATGCTTATGGTTTCTCATTATGAAGGTGCAGCTTGTAGGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
3UTR-3UTR CCA 90 bp CCAGCCCCAGCAGCAGTGCAAGGATGCGGTGTTTCCTGTATATATATCTATATCTTCTTAATGGTTCTCTaGCTTGGGTTGGACCAGAAA +
Preference number: 2 (lower is better)
Translates to: PAPAAVQGCGVSCIYIYIFLMVL*LGLDQK
Trigger: TTTCTGGTCCAACCCAAGCCAGAGAACCATTAAGAA...GATATAGATATATATACAGGAAACACCGCATCCTTGCACTGCTGCTGGGGCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
3UTR-3UTR TCA 90 bp CCTCCTACAAGCTGCACCTTCATAATGAGAAACCATAAGCATACAATGTCTACTTTCTCGGAAAATGGTTaGCTGTGCGTGTCTTGCTGC +
Preference number: 2 (lower is better)
Translates to: PPTSCTFIMRNHKHTMSTFSENG*LCVSCC
Trigger: GCAGCAAGACACGCACAGTCAACCATTTTCCGAGAA...AGTAGACATTGTATGCTTATGGTTTCTCATTATGAAGGTGCAGCTTGTAGGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
3UTR-3UTR GCA 90 bp ACCAGTTCTTCAATTTGTCTGCAAAGGAAATGTAGGTGTTCAGATGTCGGTTGTGGGTTGGACCAGAAATaGCAGGATCTCTTCACAGAG +
Preference number: 2 (lower is better)
Translates to: TSSSICLQRKCRCSDVGCGLDQK*QDLFTE
Trigger: CTCTGTGAAGAGATCCTGGCATTTCTGGTCCAACCC...ACAACCGACATCTGAACACCTACATTTCCTTTGCAGACAAATTGAAGAACTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
3UTR-3UTR GCA 90 bp AACCAGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATGTTCTTCAATTTGTCTaGAAAGGAAATGTAGGTGTT +
Preference number: 2 (lower is better)
Translates to: NQGGRDFYNHRGLACVSYVLQFV*KGNVGV
Trigger: AACACCTACATTTCCTTTGCAGACAAATTGAAGAAC...ATAAGAAACGCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCTGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
3UTR-3UTR GCA 90 bp AGGTTGAAGACAGACAAGACAAACGTCTCTATTCTCTACAAAGAGAAGGATGGGGTGTTGCTTCTTTCTTaGCAAACCCACACCTCTCCA +
Preference number: 2 (lower is better)
Translates to: RLKTDKTNVSILYKEKDGVLLLS*QTHTSP
Trigger: TGGAGAGGTGTGGGTTTGGCAAGAAAGAAGCAACAC...CCCATCCTTCTCTTTGTAGAGAATAGAGACGTTTGTCTTGTCTGTCTTCAACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
3UTR-3UTR CCA 90 bp TATATATATATGCTTTTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGCAGAATGGTTCTCTGGCTTaGGTTGGACCAGAAATGCCA +
Preference number: 2 (lower is better)
Translates to: YIYMLFPSQSLISDSTSQNGSLA*VGPEMP
Trigger: TGGCATTTCTGGTCCAACCCAAGCCAGAGAACCATT...CTGCGACGTACTGTCACTGATGAGAGACTGGGAAGGGAAAAGCATATATATATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
3UTR-3UTR CCA 90 bp CCCAGCAGCAGTGCAAGGATGCGGTGTTTCCTGTATATATATCTATATCTCTATAATGGTTCTCTGGCTTaGGTTGGACCAGAAATGCCA +
Preference number: 2 (lower is better)
Translates to: PSSSARMRCFLYIYLYLYNGSLA*VGPEMP
Trigger: TGGCATTTCTGGTCCAACCCAAGCCAGAGAACCATT...ATAGAGATATAGATATATATACAGGAAACACCGCATCCTTGCACTGCTGCTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
3UTR-3UTR CCA 90 bp ATATATATGCTTTTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGCAGCTGTTCTTAATGGTTCTCTaGCTTGGGTTGGACCAGAAA +
Preference number: 2 (lower is better)
Translates to: IYMLFPSQSLISDSTSQLFLMVL*LGLDQK
Trigger: TTTCTGGTCCAACCCAAGCCAGAGAACCATTAAGAA...CAGCTGCGACGTACTGTCACTGATGAGAGACTGGGAAGGGAAAAGCATATATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
3UTR-3UTR CCA 90 bp GCATTCAAGTGGGCCTTAGAGATGCTGGAGAAGAACAAATGGAATTGCTCGTCTTTCTTAATGGTTCTCTaGCTTGGGTTGGACCAGAAA +
Preference number: 2 (lower is better)
Translates to: AFKWALEMLEKNKWNCSSFLMVL*LGLDQK
Trigger: TTTCTGGTCCAACCCAAGCCAGAGAACCATTAAGAA...AGACGAGCAATTCCATTTGTTCTTCTCCAGCATCTCTAAGGCCCACTTGAATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
3UTR-3UTR CCA 90 bp TGCTGGAGAAGAACAAATGGAATTGCTCGTCTGCTAACTGTAACGTGCAGAACCACAATCATCGTGGTCTaGCTTGCGTTTCTTATTTGG +
Preference number: 2 (lower is better)
Translates to: CWRRTNGIARLLTVTCRTTIIVV*LAFLIW
Trigger: CCAAATAAGAAACGCAAGCCAGACCACGATGATTGT...GGTTCTGCACGTTACAGTTAGCAGACGAGCAATTCCATTTGTTCTTCTCCAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
3UTR-3UTR CCA 90 bp GCATTCAAGTGGGCCTTAGAGATGCTGGAGAAGAACAAATGGAATTGCTCGTCTCTTCTACAATCATCGTaGTCTGGCTTGCGTTTCTTA +
Preference number: 2 (lower is better)
Translates to: AFKWALEMLEKNKWNCSSLLQSS*SGLRFL
Trigger: TAAGAAACGCAAGCCAGACCACGATGATTGTAGAAG...AGACGAGCAATTCCATTTGTTCTTCTCCAGCATCTCTAAGGCCCACTTGAATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
3UTR-3UTR CCA 90 bp ACTCTCAAGAAGGGCAGGAAGAAGGTTCTGTGGCTTTTCCACCAGGATTGTAGAACCTCCCTTTGGATATaGAGTTGGTTATTACAATGG +
Preference number: 2 (lower is better)
Translates to: TLKKGRKKVLWLFHQDCRTSLWI*SWLLQW
Trigger: CCATTGTAATAACCAACTCCATATCCAAAGGGAGGT...TCTACAATCCTGGTGGAAAAGCCACAGAACCTTCTTCCTGCCCTTCTTGAGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
3UTR-3UTR GCA 90 bp GTTTTCCTTTGCATTCAAGTGGGCCTTAGAGATGCTGGAGAAGAACAAATGGAAGCAGCAGTGCAAGGATaGGGTGTTTCCTGTATATAT +
Preference number: 2 (lower is better)
Translates to: VFLCIQVGLRDAGEEQMEAAVQG*GVSCIY
Trigger: ATATATACAGGAAACACCGCATCCTTGCACTGCTGC...TTCCATTTGTTCTTCTCCAGCATCTCTAAGGCCCACTTGAATGCAAAGGAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
3UTR-3UTR GCA 90 bp TTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTGTTCTTCAATTTGTCTaGAAAGGAAATGTAGGTGTT +
Preference number: 2 (lower is better)
Translates to: FYNHRGLACVSYLAGERGVLQFV*KGNVGV
Trigger: AACACCTACATTTCCTTTGCAGACAAATTGAAGAAC...ACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
3UTR-3UTR GCA 90 bp GACTTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGTTCTTCAATTTGTCTaGAAAGGAAATGTAGGTGTT +
Preference number: 2 (lower is better)
Translates to: DFYNHRGLACVSYLAGERVLQFV*KGNVGV
Trigger: AACACCTACATTTCCTTTGCAGACAAATTGAAGAAC...CCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGAAGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
3UTR-3UTR GCA 90 bp CTTTTCTTTTTCTCATTTCAAAGGAGAGTCATCTGCAGTGGCCCTCAGAAGGACGCAAGTGTTTTCCTTTaGATTCAAGTGGGCCTTAGA +
Preference number: 2 (lower is better)
Translates to: LFFFSFQRRVICSGPQKDASVFL*IQVGLR
Trigger: TCTAAGGCCCACTTGAATGCAAAGGAAAACACTTGC...GTCCTTCTGAGGGCCACTGCAGATGACTCTCCTTTGAAATGAGAAAAAGAAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
3UTR-3UTR TCA 90 bp AGGTTGAAGACAGACAAGACAAACGTCTCTATTCTCTACAAAGAGAAGGATGGGATGGCTACTTTGGCCTaGGAAGAAGAAATGATTCAG +
Preference number: 2 (lower is better)
Translates to: RLKTDKTNVSILYKEKDGMATLA*EEEMIQ
Trigger: CTGAATCATTTCTTCTTCTCAGGCCAAAGTAGCCAT...CCCATCCTTCTCTTTGTAGAGAATAGAGACGTTTGTCTTGTCTGTCTTCAACCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
3UTR-3UTR CCA 90 bp GTTTTCCTTTGCATTCAAGTGGGCCTTAGAGATGCTGGAGAAGAACAAATGGAAACAATCATCGTGGTCTaGCTTGCGTTTCTTATTTGG +
Preference number: 2 (lower is better)
Translates to: VFLCIQVGLRDAGEEQMETIIVV*LAFLIW
Trigger: CCAAATAAGAAACGCAAGCCAGACCACGATGATTGT...TTCCATTTGTTCTTCTCCAGCATCTCTAAGGCCCACTTGAATGCAAAGGAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
3UTR-3UTR GCA 90 bp TTTCTTTTTCTCATTTCAAAGGAGAGTCATCTGCAGTGGCCCTCAGAAGGACCAAAGAACAAATGGAATTaGTCGTCTGCTAACTGTAAC +
Preference number: 2 (lower is better)
Translates to: FLFLISKESHLQWPSEGPKNKWN*SSANCN
Trigger: GTTACAGTTAGCAGACGAGCAATTCCATTTGTTCTT...TGGTCCTTCTGAGGGCCACTGCAGATGACTCTCCTTTGAAATGAGAAAAAGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
3UTR-3UTR CCA 90 bp ATCTATATATATATGCTTTTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGTTCTTAATGGTTCTCTaGCTTGGGTTGGACCAGAAA +
Preference number: 2 (lower is better)
Translates to: IYIYMLFPSQSLISDSTSFLMVL*LGLDQK
Trigger: TTTCTGGTCCAACCCAAGCCAGAGAACCATTAAGAA...CGACGTACTGTCACTGATGAGAGACTGGGAAGGGAAAAGCATATATATATAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
3UTR-3UTR CCA 90 bp CCTCCTACAAGCTGCACCTTCATAATGAGAAACCATAAGCATACAATGTCTACTACAATCATCGTGGTCTaGCTTGCGTTTCTTATTTGG +
Preference number: 2 (lower is better)
Translates to: PPTSCTFIMRNHKHTMSTTIIVV*LAFLIW
Trigger: CCAAATAAGAAACGCAAGCCAGACCACGATGATTGT...AGTAGACATTGTATGCTTATGGTTTCTCATTATGAAGGTGCAGCTTGTAGGAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
3UTR-3UTR GCA 90 bp TTTCTTTTTCTCATTTCAAAGGAGAGTCATCTGCAGTGGCCCTCAGAAGGACCAGTTCTTCAATTTGTCTaGAAAGGAAATGTAGGTGTT +
Preference number: 2 (lower is better)
Translates to: FLFLISKESHLQWPSEGPVLQFV*KGNVGV
Trigger: AACACCTACATTTCCTTTGCAGACAAATTGAAGAAC...TGGTCCTTCTGAGGGCCACTGCAGATGACTCTCCTTTGAAATGAGAAAAAGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
3UTR-3UTR GCA 90 bp CCTCCTACAAGCTGCACCTTCATAATGAGAAACCATAAGCATACAATGTCTACTGTTCTTCAATTTGTCTaGAAAGGAAATGTAGGTGTT +
Preference number: 2 (lower is better)
Translates to: PPTSCTFIMRNHKHTMSTVLQFV*KGNVGV
Trigger: AACACCTACATTTCCTTTGCAGACAAATTGAAGAAC...AGTAGACATTGTATGCTTATGGTTTCTCATTATGAAGGTGCAGCTTGTAGGAGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
3UTR GCA 72 bp AGCTTTGCAGGTCCCCTCCTCCCTCGTGGCACTGCCTaGATCTCCGTAGAAGGGAGGTCACAGCATCCGCGG +
Preference number: 3 (lower is better)
Translates to: SFAGPLLPRGTA*ISVEGRSQHPR
Trigger: CCGCGGATGCTGTGACCTCCCTTCTACGGAGATGCAGGCAGTGCCACGAGGGAGGAGGGGACCTGCAAAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
3UTR CCA 72 bp GTGTATGGAAAGTGTGCTGCTACACTCAGGGGGAGTTaGAGTGGACCCACCGGCCTGCACCAGGGGGAATGC +
Preference number: 3 (lower is better)
Translates to: VYGKCAATLRGS*SGPTGLHQGEC
Trigger: GCATTCCCCCTGGTGCAGGCCGGTGGGTCCACTCCAACTCCCCCTGAGTGTAGCAGCACACTTTCCATACAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
3UTR-3UTR CAA 90 bp CCGCCCTCAGGGACTTTTTCCACTATGCTACATGGCCTCCTGGGTGGAGAGGTGGCTGGGACGTCAGTGTaGCGTCGGAGAATCCAGAAT +
Preference number: 3 (lower is better)
Translates to: PPSGTFSTMLHGLLGGEVAGTSV*RRRIQN
Trigger: ATTCTGGATTCTCCGACGCAACACTGACGTCCCAGC...CACCTCTCCACCCAGGAGGCCATGTAGCATAGTGGAAAAAGTCCCTGAGGGCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
3UTR TCA 72 bp CTCCGTAGAAGGGAGGTCACAGCATCCGCGGGATGGTaGTTTCCCCAAACCCTGGTGGCCCATAAACTCCAC +
Preference number: 3 (lower is better)
Translates to: LRRREVTASAGW*FPQTLVAHKLH
Trigger: GTGGAGTTTATGGGCCACCAGGGTTTGGGGAAATCACCATCCCGCGGATGCTGTGACCTCCCTTCTACGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
3UTR-3UTR CAA 90 bp CCCTGCCCCAAAGCCAGGTGCAAAATCCACAACAAGGATCCTCCCTCTGAGGTGGCTGGGACGTCAGTGTaGCGTCGGAGAATCCAGAAT +
Preference number: 3 (lower is better)
Translates to: PCPKARCKIHNKDPPSEVAGTSV*RRRIQN
Trigger: ATTCTGGATTCTCCGACGCAACACTGACGTCCCAGC...CACCTCAGAGGGAGGATCCTTGTTGTGGATTTTGCACCTGGCTTTGGGGCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
3UTR-3UTR CAA 90 bp CCTATGAGCAACATCACCCGTCAGTCTCAGCTTTGTCCTGGGACAGGGGAGGGCTCATCGTGGTCTGGCTaGCGTTTCTTATTTGGCGGG +
Preference number: 3 (lower is better)
Translates to: PMSNITRQSQLCPGTGEGSSWSG*RFLFGG
Trigger: CCCGCCAAATAAGAAACGCAAGCCAGACCACGATGA...GCCCTCCCCTGTCCCAGGACAAAGCTGAGACTGACGGGTGATGTTGCTCATAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
3UTR GCA 72 bp GTTCAGATGTCGGTTGTTGCTGTCAGCCAACTGCTCTaGCAGCCCCAGCAGCAGTGCAAGGATGCGGTGTTT +
Preference number: 3 (lower is better)
Translates to: VQMSVVAVSQLL*QPQQQCKDAVF
Trigger: AAACACCGCATCCTTGCACTGCTGCTGGGGCTGGCAGAGCAGTTGGCTGACAGCAACAACCGACATCTGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
3UTR CCA 72 bp ACCAGGGCGGGAGGGACTTCTACAATCATCGTGGTCTaGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTG +
Preference number: 3 (lower is better)
Translates to: TRAGGTSTIIVV*LAFLIWRGKGV
Trigger: CACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
3UTR-3UTR CAA 90 bp CCCTGCCCCAAAGCCAGGTGCAAAATCCACAACAAGGATCCTCCCTCTGAGGTGGTGTTCAGATGTCGGTaGTTGCTGTCAGCCAACTGC +
Preference number: 3 (lower is better)
Translates to: PCPKARCKIHNKDPPSEVVFRCR*LLSANC
Trigger: GCAGTTGGCTGACAGCAACAACCGACATCTGAACAC...CACCTCAGAGGGAGGATCCTTGTTGTGGATTTTGCACCTGGCTTTGGGGCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
3UTR TCA 72 bp GAAGCCCACGTGTGGCAGAGAGCAATGCCAAGCTTGTaGTGGGAGCTTCTTGAAGGGTTCCTGTGGTCTTGG +
Preference number: 3 (lower is better)
Translates to: EAHVWQRAMPSL*WELLEGFLWSW
Trigger: CCAAGACCACAGGAACCCTTCAAGAAGCTCCCATCACAAGCTTGGCATTGCTCTCTGCCACACGTGGGCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
3UTR GCA 72 bp GGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTaGGTTTCTTATTTGGCGGGGGAAAGGGGTGAGCAA +
Preference number: 3 (lower is better)
Translates to: GGRDFYNHRGLA*VSYLAGERGEQ
Trigger: TTGCTCACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
3UTR GCA 72 bp AGAACTCCTAACCGCCCTCAGGGACTTTTTCCACTATaGTACATGGCCTCCTGGGTGGAGAGGTGGCACAGA +
Preference number: 3 (lower is better)
Translates to: RTPNRPQGLFPL*YMASWVERWHR
Trigger: TCTGTGCCACCTCTCCACCCAGGAGGCCATGTAGCATAGTGGAAAAAGTCCCTGAGGGCGGTTAGGAGTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
3UTR CCA 72 bp GAGCCAACCCACACCCAGAGTCCAGGTCTCCTTAGCTaGGCCAGTTCAGTGAGATCTAGGAACCTCAGGATA +
Preference number: 3 (lower is better)
Translates to: EPTHTQSPGLLS*ASSVRSRNLRI
Trigger: TATCCTGAGGTTCCTAGATCTCACTGAACTGGCCCAGCTAAGGAGACCTGGACTCTGGGTGTGGGTTGGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
3UTR CCA 72 bp GCGAGAGTGGGGAGATGCTCTCAGATGGGCCAGCCATaGTTGAAATATAAAGCTGGCTCAGGTGGCTCCTCA +
Preference number: 3 (lower is better)
Translates to: ARVGRCSQMGQP*LKYKAGSGGSS
Trigger: TGAGGAGCCACCTGAGCCAGCTTTATATTTCAACCATGGCTGGCCCATCTGAGAGCATCTCCCCACTCTCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
3UTR CCA 72 bp CTGATGTCACATGGTGAGTTAGGAGCTGAGCCAGGATaGTCACCCAGAACTCCTAACCGCCCTCAGGGACTT +
Preference number: 3 (lower is better)
Translates to: LMSHGELGAEPG*SPRTPNRPQGL
Trigger: AAGTCCCTGAGGGCGGTTAGGAGTTCTGGGTGACCATCCTGGCTCAGCTCCTAACTCACCATGTGACATCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
3UTR-3UTR CAA 90 bp TTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGCAGCTGGGACGTCAGTGTGTTCTCTGGCTTGGGTaGGACCAGAAATGCCAGGAT +
Preference number: 3 (lower is better)
Translates to: FPSQSLISDSTSQLGRQCVLWLG*DQKCQD
Trigger: ATCCTGGCATTTCTGGTCCAACCCAAGCCAGAGAAC...ACACTGACGTCCCAGCTGCGACGTACTGTCACTGATGAGAGACTGGGAAGGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
3UTR-3UTR CAA 90 bp CCAGGATGGTCACCCAGAACTCCTAACCGCCCTCAGGGACTTTTTCCACTATGCGTTCTCTGGCTTGGGTaGGACCAGAAATGCCAGGAT +
Preference number: 3 (lower is better)
Translates to: PGWSPRTPNRPQGLFPLCVLWLG*DQKCQD
Trigger: ATCCTGGCATTTCTGGTCCAACCCAAGCCAGAGAAC...GCATAGTGGAAAAAGTCCCTGAGGGCGGTTAGGAGTTCTGGGTGACCATCCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
3UTR-3UTR CAA 90 bp CTGCTCTGCCAGCCCCAGCAGCAGTGCAAGGATGCGGTGTTTCCTGTATATATAGCTGGGACGTCAGTGTaGCGTCGGAGAATCCAGAAT +
Preference number: 3 (lower is better)
Translates to: LLCQPQQQCKDAVFPVYIAGTSV*RRRIQN
Trigger: ATTCTGGATTCTCCGACGCAACACTGACGTCCCAGC...TATATATACAGGAAACACCGCATCCTTGCACTGCTGCTGGGGCTGGCAGAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
3UTR-3UTR CAA 90 bp TTCAGTGTGCTCAGGACTCCTGGTTCCTGCAAAGATGAGTTCCTAGACCGAAGTCTATGCCCCGATAGGTaGGCGAGAGTGGGGAGATGC +
Preference number: 3 (lower is better)
Translates to: FSVLRTPGSCKDEFLDRSLCPDR*ARVGRC
Trigger: GCATCTCCCCACTCTCGCCAACCTATCGGGGCATAG...ACTTCGGTCTAGGAACTCATCTTTGCAGGAACCAGGAGTCCTGAGCACACTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
3UTR TCA 72 bp GAGTGGGGAGATGCTCTCAGATGGGCCAGCCATGGTTaGAATATAAAGCTGGCTCAGGTGGCTCCTCAGGTT +
Preference number: 3 (lower is better)
Translates to: EWGDALRWASHG*NIKLAQVAPQV
Trigger: AACCTGAGGAGCCACCTGAGCCAGCTTTATATTTCAACCATGGCTGGCCCATCTGAGAGCATCTCCCCACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
3UTR TCA 72 bp GTTCAGTGTGCTCAGGACTCCTGGTTCCTGCAAAGATaGGTTCCTAGACCGAAGTGGCCCAGAGAGGATGGA +
Preference number: 3 (lower is better)
Translates to: VQCAQDSWFLQR*VPRPKWPREDG
Trigger: TCCATCCTCTCTGGGCCACTTCGGTCTAGGAACTCATCTTTGCAGGAACCAGGAGTCCTGAGCACACTGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
3UTR GCA 72 bp GGGCTATGCCCCGATAGGTTGGCGAGAGTGGGGAGATaGTCTCAGATGGGCCAGCCATGGTTGAAATATAAA +
Preference number: 3 (lower is better)
Translates to: GLCPDRLARVGR*SQMGQPWLKYK
Trigger: TTTATATTTCAACCATGGCTGGCCCATCTGAGAGCATCTCCCCACTCTCGCCAACCTATCGGGGCATAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
3UTR-3UTR CAA 90 bp AGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGGCTGGGACGTCAGTGTaGCGTCGGAGAATCCAGAAT +
Preference number: 3 (lower is better)
Translates to: RAGGTSTIIVVWLAFLIWAGTSV*RRRIQN
Trigger: ATTCTGGATTCTCCGACGCAACACTGACGTCCCAGC...CCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
3UTR-3UTR CAA 90 bp TCGTCTGCTAACTGTAACGTGCAGAACCAGGGCGGGAGGGACTTCTACAATCATGCTGGGACGTCAGTGTaGCGTCGGAGAATCCAGAAT +
Preference number: 3 (lower is better)
Translates to: SSANCNVQNQGGRDFYNHAGTSV*RRRIQN
Trigger: ATTCTGGATTCTCCGACGCAACACTGACGTCCCAGC...ATGATTGTAGAAGTCCCTCCCGCCCTGGTTCTGCACGTTACAGTTAGCAGACGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
3UTR-3UTR CAA 90 bp AGGTGTATGTCATCACTGACAAGCCAAAGGGACGCATCTAACCTGGGCCGCCTGTTCAGATGTCGGTTGTaGCTGTCAGCCAACTGCTCT +
Preference number: 3 (lower is better)
Translates to: RCMSSLTSQRDASNLGRLFRCRL*LSANCS
Trigger: AGAGCAGTTGGCTGACAGCAACAACCGACATCTGAA...CAGGCGGCCCAGGTTAGATGCGTCCCTTTGGCTTGTCAGTGATGACATACACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
3UTR-3UTR CAA 90 bp CCAGGATGGTCACCCAGAACTCCTAACCGCCCTCAGGGACTTTTTCCACTATGCTTCAGATGTCGGTTGTaGCTGTCAGCCAACTGCTCT +
Preference number: 3 (lower is better)
Translates to: PGWSPRTPNRPQGLFPLCFRCRL*LSANCS
Trigger: AGAGCAGTTGGCTGACAGCAACAACCGACATCTGAA...GCATAGTGGAAAAAGTCCCTGAGGGCGGTTAGGAGTTCTGGGTGACCATCCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
3UTR-3UTR CAA 90 bp ACAAATGGAATTGCTCGTCTGCTAACTGTAACGTGCAGAACCAGGGCGGGAGGGGTGTTCAGATGTCGGTaGTTGCTGTCAGCCAACTGC +
Preference number: 3 (lower is better)
Translates to: TNGIARLLTVTCRTRAGGVFRCR*LLSANC
Trigger: GCAGTTGGCTGACAGCAACAACCGACATCTGAACAC...CCCTCCCGCCCTGGTTCTGCACGTTACAGTTAGCAGACGAGCAATTCCATTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
3UTR-3UTR CAA 90 bp TCGTCTGCTAACTGTAACGTGCAGAACCAGGGCGGGAGGGACTTCTACAATCATGCTTGCGTTTCTTATTaGGCGGGGGAAAGGGGTGAG +
Preference number: 3 (lower is better)
Translates to: SSANCNVQNQGGRDFYNHACVSY*AGERGE
Trigger: CTCACCCCTTTCCCCCGCCAAATAAGAAACGCAAGC...ATGATTGTAGAAGTCCCTCCCGCCCTGGTTCTGCACGTTACAGTTAGCAGACGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
3UTR-3UTR CAA 90 bp AAGACTGAAAACCAAGGCAAGCCCCGTAGGGAGATAAGGACTAAGCCAGGGACCTCATCGTGGTCTGGCTaGCGTTTCTTATTTGGCGGG +
Preference number: 3 (lower is better)
Translates to: KTENQGKPRREIRTKPGTSSWSG*RFLFGG
Trigger: CCCGCCAAATAAGAAACGCAAGCCAGACCACGATGA...GGTCCCTGGCTTAGTCCTTATCTCCCTACGGGGCTTGCCTTGGTTTTCAGTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
3UTR TCA 72 bp AGCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATaGAGGCCCCTTCTTAATGGTTCTCTGGCTTGGGTT +
Preference number: 3 (lower is better)
Translates to: SWDVSVASENPE*RPLLNGSLAWV
Trigger: AACCCAAGCCAGAGAACCATTAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
3UTR TCA 72 bp GCAGTGGGACATTTTCCCTCATCAAGGGGCACTTTCTaGGCTCAGAGAAGTAGCTTGTGGCAGACAAGCCTG +
Preference number: 3 (lower is better)
Translates to: AVGHFPSSRGTF*AQRSSLWQTSL
Trigger: CAGGCTTGTCTGCCACAAGCTACTTCTCTGAGCTCAGAAAGTGCCCCTTGATGAGGGAAAATGTCCCACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
3UTR-3UTR CAA 90 bp TCGTCTGCTAACTGTAACGTGCAGAACCAGGGCGGGAGGGACTTCTACAATCATGTTCTCTGGCTTGGGTaGGACCAGAAATGCCAGGAT +
Preference number: 3 (lower is better)
Translates to: SSANCNVQNQGGRDFYNHVLWLG*DQKCQD
Trigger: ATCCTGGCATTTCTGGTCCAACCCAAGCCAGAGAAC...ATGATTGTAGAAGTCCCTCCCGCCCTGGTTCTGCACGTTACAGTTAGCAGACGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
3UTR-3UTR CAA 90 bp TCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTGGTTCTCTGGCTTGGGTaGGACCAGAAATGCCAGGAT +
Preference number: 3 (lower is better)
Translates to: STIIVVWLAFLIWRGKGVVLWLG*DQKCQD
Trigger: ATCCTGGCATTTCTGGTCCAACCCAAGCCAGAGAAC...CACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
3UTR-3UTR CAA 90 bp CTGCCAGCCCCAGCAGCAGTGCAAGGATGCGGTGTTTCCTGTATATATATCTATGCTGGGACGTCAGTGTaGCGTCGGAGAATCCAGAAT +
Preference number: 3 (lower is better)
Translates to: LPAPAAVQGCGVSCIYIYAGTSV*RRRIQN
Trigger: ATTCTGGATTCTCCGACGCAACACTGACGTCCCAGC...ATAGATATATATACAGGAAACACCGCATCCTTGCACTGCTGCTGGGGCTGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
3UTR-3UTR CAA 90 bp TCGTCTGCTAACTGTAACGTGCAGAACCAGGGCGGGAGGGACTTCTACAATCATGTGTTCAGATGTCGGTaGTTGCTGTCAGCCAACTGC +
Preference number: 3 (lower is better)
Translates to: SSANCNVQNQGGRDFYNHVFRCR*LLSANC
Trigger: GCAGTTGGCTGACAGCAACAACCGACATCTGAACAC...ATGATTGTAGAAGTCCCTCCCGCCCTGGTTCTGCACGTTACAGTTAGCAGACGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
3UTR-3UTR CAA 90 bp AACCAGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTCAGATGTCGGTTGTaGCTGTCAGCCAACTGCTCT +
Preference number: 3 (lower is better)
Translates to: NQGGRDFYNHRGLACVSYFRCRL*LSANCS
Trigger: AGAGCAGTTGGCTGACAGCAACAACCGACATCTGAA...ATAAGAAACGCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCTGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
3UTR-3UTR CAA 90 bp AGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGTTCAGATGTCGGTTGTaGCTGTCAGCCAACTGCTCT +
Preference number: 3 (lower is better)
Translates to: RAGGTSTIIVVWLAFLIWFRCRL*LSANCS
Trigger: AGAGCAGTTGGCTGACAGCAACAACCGACATCTGAA...CCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
3UTR-3UTR CAA 90 bp GGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTGAGCAAGGGATTATATTCAGATGTCGGTTGTaGCTGTCAGCCAACTGCTCT +
Preference number: 3 (lower is better)
Translates to: GLACVSYLAGERGEQGIIFRCRL*LSANCS
Trigger: AGAGCAGTTGGCTGACAGCAACAACCGACATCTGAA...TATAATCCCTTGCTCACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
3UTR-3UTR CAA 90 bp TTCAGTGTGCTCAGGACTCCTGGTTCCTGCAAAGATGAGTTCCTAGACCGAAGTCAGGGAGAAGGTGTCTaGAACTGGCATTTTGGGGAC +
Preference number: 3 (lower is better)
Translates to: FSVLRTPGSCKDEFLDRSQGEGV*NWHFGD
Trigger: GTCCCCAAAATGCCAGTTCAAGACACCTTCTCCCTG...ACTTCGGTCTAGGAACTCATCTTTGCAGGAACCAGGAGTCCTGAGCACACTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
3UTR-3UTR CAA 90 bp TGCTGGAGAAGAACAAATGGAATTGCTCGTCTGCTAACTGTAACGTGCAGAACCGCTTGCGTTTCTTATTaGGCGGGGGAAAGGGGTGAG +
Preference number: 3 (lower is better)
Translates to: CWRRTNGIARLLTVTCRTACVSY*AGERGE
Trigger: CTCACCCCTTTCCCCCGCCAAATAAGAAACGCAAGC...GGTTCTGCACGTTACAGTTAGCAGACGAGCAATTCCATTTGTTCTTCTCCAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
3UTR CCA 72 bp ATGGCTGAGAGCACCACCTCCCTTTGGATATGGAGTTaGTTATTACAATGGGGTCAGGGAAGGGCAGAATGT +
Preference number: 3 (lower is better)
Translates to: MAESTTSLWIWS*LLQWGQGRAEC
Trigger: ACATTCTGCCCTTCCCTGACCCCATTGTAATAACCAACTCCATATCCAAAGGGAGGTGGTGCTCTCAGCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
3UTR CCA 72 bp TCTACAATGGCTGAGAGCACCACCTCCCTTTGGATATaGAGTTGGTTATTACAATGGGGTCAGGGAAGGGCA +
Preference number: 3 (lower is better)
Translates to: STMAESTTSLWI*SWLLQWGQGRA
Trigger: TGCCCTTCCCTGACCCCATTGTAATAACCAACTCCATATCCAAAGGGAGGTGGTGCTCTCAGCCATTGTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
3UTR-3UTR CAA 90 bp ATATATATGCTTTTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGCAGCTGGTTCTCTGGCTTGGGTaGGACCAGAAATGCCAGGAT +
Preference number: 3 (lower is better)
Translates to: IYMLFPSQSLISDSTSQLVLWLG*DQKCQD
Trigger: ATCCTGGCATTTCTGGTCCAACCCAAGCCAGAGAAC...CAGCTGCGACGTACTGTCACTGATGAGAGACTGGGAAGGGAAAAGCATATATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
3UTR-3UTR CAA 90 bp CTTTTCTTTTTCTCATTTCAAAGGAGAGTCATCTGCAGTGGCCCTCAGAAGGACGCTGGGACGTCAGTGTaGCGTCGGAGAATCCAGAAT +
Preference number: 3 (lower is better)
Translates to: LFFFSFQRRVICSGPQKDAGTSV*RRRIQN
Trigger: ATTCTGGATTCTCCGACGCAACACTGACGTCCCAGC...GTCCTTCTGAGGGCCACTGCAGATGACTCTCCTTTGAAATGAGAAAAAGAAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
3UTR-3UTR CAA 90 bp TGCTGGAGAAGAACAAATGGAATTGCTCGTCTGCTAACTGTAACGTGCAGAACCGTGTTCAGATGTCGGTaGTTGCTGTCAGCCAACTGC +
Preference number: 3 (lower is better)
Translates to: CWRRTNGIARLLTVTCRTVFRCR*LLSANC
Trigger: GCAGTTGGCTGACAGCAACAACCGACATCTGAACAC...GGTTCTGCACGTTACAGTTAGCAGACGAGCAATTCCATTTGTTCTTCTCCAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
3UTR-3UTR CAA 90 bp TTCAGTGTGCTCAGGACTCCTGGTTCCTGCAAAGATGAGTTCCTAGACCGAAGTATGGGCCAGCCATGGTaGAAATATAAAGCTGGCTCA +
Preference number: 3 (lower is better)
Translates to: FSVLRTPGSCKDEFLDRSMGQPW*KYKAGS
Trigger: TGAGCCAGCTTTATATTTCAACCATGGCTGGCCCAT...ACTTCGGTCTAGGAACTCATCTTTGCAGGAACCAGGAGTCCTGAGCACACTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
3UTR TCA 72 bp TATATATATGCTTTTCCCTTCCCAGTCTCTCATCAGTaGCAGTACGTCGCAGCTGGGACGTCAGTGTTGCGT +
Preference number: 3 (lower is better)
Translates to: YIYAFPFPVSHQ*QYVAAGTSVLR
Trigger: ACGCAACACTGACGTCCCAGCTGCGACGTACTGTCACTGATGAGAGACTGGGAAGGGAAAAGCATATATATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
3UTR TCA 72 bp GGCCAGTCTTGGAATGTGCTTGCAGGATTCAAAAACTaGAACAGGTCCTGGTACTTCCTGTACCCTCAGATG +
Preference number: 3 (lower is better)
Translates to: GQSWNVLAGFKN*NRSWYFLYPQM
Trigger: CATCTGAGGGTACAGGAAGTACCAGGACCTGTTTCAGTTTTTGAATCCTGCAAGCACATTCCAAGACTGGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
3UTR GCA 72 bp AGAACAAATGGAATTGCTCGTCTGCTAACTGTAACGTaGAGAACCAGGGCGGGAGGGACTTCTACAATCATC +
Preference number: 3 (lower is better)
Translates to: RTNGIARLLTVT*RTRAGGTSTII
Trigger: GATGATTGTAGAAGTCCCTCCCGCCCTGGTTCTGCACGTTACAGTTAGCAGACGAGCAATTCCATTTGTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
3UTR CCA 72 bp AGAATCCAGAATGAAGGCCCCTTCTTAATGGTTCTCTaGCTTGGGTTGGACCAGAAATGCCAGGATCTCTTC +
Preference number: 3 (lower is better)
Translates to: RIQNEGPFLMVL*LGLDQKCQDLF
Trigger: GAAGAGATCCTGGCATTTCTGGTCCAACCCAAGCCAGAGAACCATTAAGAAGGGGCCTTCATTCTGGATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
3UTR CCA 72 bp CCATCTTCTACAATGGCTGAGAGCACCACCTCCCTTTaGATATGGAGTTGGTTATTACAATGGGGTCAGGGA +
Preference number: 3 (lower is better)
Translates to: PSSTMAESTTSL*IWSWLLQWGQG
Trigger: TCCCTGACCCCATTGTAATAACCAACTCCATATCCAAAGGGAGGTGGTGCTCTCAGCCATTGTAGAAGATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
3UTR CCA 72 bp TTCTGTGGCTTTTCCACCAGGATTGTAGAAAGAACCTaGTGTATGGAAAGTGTGCTGCTACACTCAGGGGGA +
Preference number: 3 (lower is better)
Translates to: FCGFSTRIVERT*CMESVLLHSGG
Trigger: TCCCCCTGAGTGTAGCAGCACACTTTCCATACACCAGGTTCTTTCTACAATCCTGGTGGAAAAGCCACAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
3UTR-3UTR CAA 90 bp AGGTTGAAGACAGACAAGACAAACGTCTCTATTCTCTACAAAGAGAAGGATGGGGCTTGCGTTTCTTATTaGGCGGGGGAAAGGGGTGAG +
Preference number: 3 (lower is better)
Translates to: RLKTDKTNVSILYKEKDGACVSY*AGERGE
Trigger: CTCACCCCTTTCCCCCGCCAAATAAGAAACGCAAGC...CCCATCCTTCTCTTTGTAGAGAATAGAGACGTTTGTCTTGTCTGTCTTCAACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
3UTR-3UTR CAA 90 bp GTTTTCCTTTGCATTCAAGTGGGCCTTAGAGATGCTGGAGAAGAACAAATGGAAGTGTTCAGATGTCGGTaGTTGCTGTCAGCCAACTGC +
Preference number: 3 (lower is better)
Translates to: VFLCIQVGLRDAGEEQMEVFRCR*LLSANC
Trigger: GCAGTTGGCTGACAGCAACAACCGACATCTGAACAC...TTCCATTTGTTCTTCTCCAGCATCTCTAAGGCCCACTTGAATGCAAAGGAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
3UTR-3UTR CAA 90 bp CCTCCTACAAGCTGCACCTTCATAATGAGAAACCATAAGCATACAATGTCTACTGCTTGCGTTTCTTATTaGGCGGGGGAAAGGGGTGAG +
Preference number: 3 (lower is better)
Translates to: PPTSCTFIMRNHKHTMSTACVSY*AGERGE
Trigger: CTCACCCCTTTCCCCCGCCAAATAAGAAACGCAAGC...AGTAGACATTGTATGCTTATGGTTTCTCATTATGAAGGTGCAGCTTGTAGGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
3UTR CCA 72 bp TTCAAGTGGGCCTTAGAGATGCTGGAGAAGAACAAATaGAATTGCTCGTCTGCTAACTGTAACGTGCAGAAC +
Preference number: 3 (lower is better)
Translates to: FKWALEMLEKNK*NCSSANCNVQN
Trigger: GTTCTGCACGTTACAGTTAGCAGACGAGCAATTCCATTTGTTCTTCTCCAGCATCTCTAAGGCCCACTTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
3UTR CCA 72 bp TGCTTTGCTGTGCAAGTGTTTTCCTTTGCATTCAAGTaGGCCTTAGAGATGCTGGAGAAGAACAAATGGAAT +
Preference number: 3 (lower is better)
Translates to: CFAVQVFSFAFK*ALEMLEKNKWN
Trigger: ATTCCATTTGTTCTTCTCCAGCATCTCTAAGGCCCACTTGAATGCAAAGGAAAACACTTGCACAGCAAAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp CCTATGAGCAACATCACCCGTCAGTCTCAGCTTTGTCCTGGGACAGGGGAGGGCCCATGTCGGGCAGGTTaGGCGAGGGGCGGCCCCCTC +
Preference number: 4 (lower is better)
Translates to: PMSNITRQSQLCPGTGEGPCRAG*ARGGPL
Trigger: GAGGGGGCCGCCCCTCGCCCAACCTGCCCGACATGG...GCCCTCCCCTGTCCCAGGACAAAGCTGAGACTGACGGGTGATGTTGCTCATAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000338074.7
ENST00000636016.2
CDS-3UTR CCA 90 bp TACGTCGCAGCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCCCATGTCGGGCAGGTTaGGCGAGGGGCGGCCCCCTC +
Preference number: 4 (lower is better)
Translates to: YVAAGTSVLRRRIQNEGPPCRAG*ARGGPL
Trigger: GAGGGGGCCGCCCCTCGCCCAACCTGCCCGACATGG...GGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGCTGCGACGTA
66% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000338074.7
ENST00000636016.2
CDS-3UTR CCA 90 bp TACGTCGCAGCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTCTGGCTCGCGGTCCTaGTGTCCGGCGGCTGCCCCG +
Preference number: 4 (lower is better)
Translates to: YVAAGTSVLRRRIQNEGPSGSRS*CPAAAP
Trigger: CGGGGCAGCCGCCGGACACCAGGACCGCGAGCCAGA...GGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGCTGCGACGTA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
CDS-3UTR TCA 90 bp TACACTGAACCCGTCAGCCCCTACTGTGAGCCAACCCACACCCAGAGTCCAGGTGTGCAGGCCGGTCAATaGGGGCGCTGGCCTGGCGAG +
Preference number: 4 (lower is better)
Translates to: YTEPVSPYCEPTHTQSPGVQAGQ*GRWPGE
Trigger: CTCGCCAGGCCAGCGCCCTCATTGACCGGCCTGCAC...ACCTGGACTCTGGGTGTGGGTTGGCTCACAGTAGGGGCTGACGGGTTCAGTGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp TACACTGAACCCGTCAGCCCCTACTGTGAGCCAACCCACACCCAGAGTCCAGGTGCCTGTGTCACTCTCTaGGGCCCGGGGACGTGGTGG +
Preference number: 4 (lower is better)
Translates to: YTEPVSPYCEPTHTQSPGACVTL*GPGTWW
Trigger: CCACCACGTCCCCGGGCCCCAGAGAGTGACACAGGC...ACCTGGACTCTGGGTGTGGGTTGGCTCACAGTAGGGGCTGACGGGTTCAGTGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp TACACTGAACCCGTCAGCCCCTACTGTGAGCCAACCCACACCCAGAGTCCAGGTGTGGGCCTGGGATCATaGCAGCTGCCCCCTTCCCGG +
Preference number: 4 (lower is better)
Translates to: YTEPVSPYCEPTHTQSPGVGLGS*QLPPSR
Trigger: CCGGGAAGGGGGCAGCTGCCATGATCCCAGGCCCAC...ACCTGGACTCTGGGTGTGGGTTGGCTCACAGTAGGGGCTGACGGGTTCAGTGTA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp AGGTGTATGTCATCACTGACAAGCCAAAGGGACGCATCTAACCTGGGCCGCCTGTCTGGCTCGCGGTCCTaGTGTCCGGCGGCTGCCCCG +
Preference number: 4 (lower is better)
Translates to: RCMSSLTSQRDASNLGRLSGSRS*CPAAAP
Trigger: CGGGGCAGCCGCCGGACACCAGGACCGCGAGCCAGA...CAGGCGGCCCAGGTTAGATGCGTCCCTTTGGCTTGTCAGTGATGACATACACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373946.7
ENST00000441639.5
CDS-3UTR CCA 90 bp AACGTGCAGAACCAGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCTGTCAGTCAGGCACCTaGCGGCGGCGGCGCGGCTTC +
Preference number: 4 (lower is better)
Translates to: NVQNQGGRDFYNHRGLACCQSGT*RRRRGF
Trigger: GAAGCCGCGCCGCCGCCGCCAGGTGCCTGACTGACA...GCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCTGGTTCTGCACGTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
CDS-3UTR TCA 90 bp GCTCGTCTGCTAACTGTAACGTGCAGAACCAGGGCGGGAGGGACTTCTACAATCGTGCAGGCCGGTCAATaGGGGCGCTGGCCTGGCGAG +
Preference number: 4 (lower is better)
Translates to: ARLLTVTCRTRAGGTSTIVQAGQ*GRWPGE
Trigger: CTCGCCAGGCCAGCGCCCTCATTGACCGGCCTGCAC...GATTGTAGAAGTCCCTCCCGCCCTGGTTCTGCACGTTACAGTTAGCAGACGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp TACGTCGCAGCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTCCAGCTCCCGGGTCTaGTTAGGGGCGAAGCGGAGC +
Preference number: 4 (lower is better)
Translates to: YVAAGTSVLRRRIQNEGPSSSRV*LGAKRS
Trigger: GCTCCGCTTCGCCCCTAACCAGACCCGGGAGCTGGA...GGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGCTGCGACGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp CCTATGAGCAACATCACCCGTCAGTCTCAGCTTTGTCCTGGGACAGGGGAGGGCCTAACCTGGGCCGCCTaGGGGCATCCCTGGGCTATG +
Preference number: 4 (lower is better)
Translates to: PMSNITRQSQLCPGTGEGLTWAA*GHPWAM
Trigger: CATAGCCCAGGGATGCCCCCAGGCGGCCCAGGTTAG...GCCCTCCCCTGTCCCAGGACAAAGCTGAGACTGACGGGTGATGTTGCTCATAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp TACGTCGCAGCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCCAGGGGGAGTTGGAGTaGACCCACCGGCCTGCACCA +
Preference number: 4 (lower is better)
Translates to: YVAAGTSVLRRRIQNEGPQGELE*THRPAP
Trigger: TGGTGCAGGCCGGTGGGTCCACTCCAACTCCCCCTG...GGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGCTGCGACGTA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp ACAAATGGAATTGCTCGTCTGCTAACTGTAACGTGCAGAACCAGGGCGGGAGGGGTGCAGGCCGGTCAATaGGGGCGCTGGCCTGGCGAG +
Preference number: 4 (lower is better)
Translates to: TNGIARLLTVTCRTRAGGVQAGQ*GRWPGE
Trigger: CTCGCCAGGCCAGCGCCCTCATTGACCGGCCTGCAC...CCCTCCCGCCCTGGTTCTGCACGTTACAGTTAGCAGACGAGCAATTCCATTTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp CCTATGAGCAACATCACCCGTCAGTCTCAGCTTTGTCCTGGGACAGGGGAGGGCCATCATGGTTCTCGCTaGCCGAGGCTGGGCGGGAGA +
Preference number: 4 (lower is better)
Translates to: PMSNITRQSQLCPGTGEGHHGSR*PRLGGR
Trigger: TCTCCCGCCCAGCCTCGGTCAGCGAGAACCATGATG...GCCCTCCCCTGTCCCAGGACAAAGCTGAGACTGACGGGTGATGTTGCTCATAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp CCGCCCTCAGGGACTTTTTCCACTATGCTACATGGCCTCCTGGGTGGAGAGGTGTCAGCCTCTGACCGTTaGCCCCCAGACTCGCCATCC +
Preference number: 4 (lower is better)
Translates to: PPSGTFSTMLHGLLGGEVSASDR*PPDSPS
Trigger: GGATGGCGAGTCTGGGGGGCAACGGTCAGAGGCTGA...CACCTCTCCACCCAGGAGGCCATGTAGCATAGTGGAAAAAGTCCCTGAGGGCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp TACACTGAACCCGTCAGCCCCTACTGTGAGCCAACCCACACCCAGAGTCCAGGTGTCAGCCAACTGCTCTaGCAGCCCCAGCAGCAGTGC +
Preference number: 4 (lower is better)
Translates to: YTEPVSPYCEPTHTQSPGVSQLL*QPQQQC
Trigger: GCACTGCTGCTGGGGCTGGCAGAGCAGTTGGCTGAC...ACCTGGACTCTGGGTGTGGGTTGGCTCACAGTAGGGGCTGACGGGTTCAGTGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp AGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGGGTCGCGGCGGGCTCTaGGGAGCAGCCTGTTCGGCG +
Preference number: 4 (lower is better)
Translates to: RAGGTSTIIVVWLAFLIWGRGGL*GAACSA
Trigger: CGCCGAACAGGCTGCTCCGCAGAGCCCGCCGCGACC...CCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338074.7
ENST00000636016.2
CDS-3UTR CCA 90 bp CCCAGTCTCTCATCAGTGACAGTACGTCGCAGCTGGGACGTCAGTGTTGCGTCGTCACCAGGAAGCCCTTaGGTGGGGGCTCAGGGGACA +
Preference number: 4 (lower is better)
Translates to: PSLSSVTVRRSWDVSVASSPGSP*VGAQGT
Trigger: TGTCCCCTGAGCCCCCACCCAAGGGCTTCCTGGTGA...CGACGCAACACTGACGTCCCAGCTGCGACGTACTGTCACTGATGAGAGACTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp AACGTGCAGAACCAGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCATGAGGGCGCTGGCCTaGCGAGTCTGTGCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: NVQNQGGRDFYNHRGLACMRALA*RVCAWV
Trigger: GACCCAGGCACAGACTCGCCAGGCCAGCGCCCTCAT...GCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCTGGTTCTGCACGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp AACGTGCAGAACCAGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCCGTGGCCACCGTCTGTaGGCCTGGGATCATGGCAGC +
Preference number: 4 (lower is better)
Translates to: NVQNQGGRDFYNHRGLACRGHRL*AWDHGS
Trigger: GCTGCCATGATCCCAGGCCCACAGACGGTGGCCACG...GCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCTGGTTCTGCACGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp TTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGCAGCTGGGACGTCAGTGTGGTGACCAGCACGCCTaGGCCCGGGGTTCCCCATGT +
Preference number: 4 (lower is better)
Translates to: FPSQSLISDSTSQLGRQCGDQHA*ARGSPC
Trigger: ACATGGGGAACCCCGGGCCCAGGCGTGCTGGTCACC...ACACTGACGTCCCAGCTGCGACGTACTGTCACTGATGAGAGACTGGGAAGGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338074.7
ENST00000636016.2
CDS-3UTR CCA 90 bp AAGACTGAAAACCAAGGCAAGCCCCGTAGGGAGATAAGGACTAAGCCAGGGACCGCCTCTGGGTGGCCGTaGCCTGCAGGGGTCACAGGG +
Preference number: 4 (lower is better)
Translates to: KTENQGKPRREIRTKPGTASGWP*PAGVTG
Trigger: CCCTGTGACCCCTGCAGGCCACGGCCACCCAGAGGC...GGTCCCTGGCTTAGTCCTTATCTCCCTACGGGGCTTGCCTTGGTTTTCAGTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000636016.2
CDS-3UTR CCA 90 bp CTCCCCTCCCACCTTCTTCAGCCTGAGAATAGTCCCTGGCACAAGCAGGTAATCGGGACGCATCTAACCTaGGCCGCCTGGGGGCATCCC +
Preference number: 4 (lower is better)
Translates to: LPSHLLQPENSPWHKQVIGTHLT*AAWGHP
Trigger: GGGATGCCCCCAGGCGGCCCAGGTTAGATGCGTCCC...GATTACCTGCTTGTGCCAGGGACTATTCTCAGGCTGAAGAAGGTGGGAGGGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp CCGCCCTCAGGGACTTTTTCCACTATGCTACATGGCCTCCTGGGTGGAGAGGTGACACTCAGGGGGAGTTaGAGTGGACCCACCGGCCTG +
Preference number: 4 (lower is better)
Translates to: PPSGTFSTMLHGLLGGEVTLRGS*SGPTGL
Trigger: CAGGCCGGTGGGTCCACTCCAACTCCCCCTGAGTGT...CACCTCTCCACCCAGGAGGCCATGTAGCATAGTGGAAAAAGTCCCTGAGGGCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp AACCAGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTCTGGCTCGCGGTCCTaGTGTCCGGCGGCTGCCCCG +
Preference number: 4 (lower is better)
Translates to: NQGGRDFYNHRGLACVSYSGSRS*CPAAAP
Trigger: CGGGGCAGCCGCCGGACACCAGGACCGCGAGCCAGA...ATAAGAAACGCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCTGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
CDS-3UTR CCA 90 bp GAGGCGGGAGAGAGGAAGGTAGGTTTTGCAGCCCAGTGTCAAGATCCAGAAAGTTGTCAGTCAGGCACCTaGCGGCGGCGGCGCGGCTTC +
Preference number: 4 (lower is better)
Translates to: EAGERKVGFAAQCQDPESCQSGT*RRRRGF
Trigger: GAAGCCGCGCCGCCGCCGCCAGGTGCCTGACTGACA...ACTTTCTGGATCTTGACACTGGGCTGCAAAACCTACCTTCCTCTCTCCCGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
CDS-3UTR CCA 90 bp AACGTGCAGAACCAGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCAAGTCCCCTGGGGGCTaGAGTTGGGCGAAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: NVQNQGGRDFYNHRGLACKSPGG*SWAKPR
Trigger: CCTGGGCTTCGCCCAACTCCAGCCCCCAGGGGACTT...GCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCTGGTTCTGCACGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS-3UTR TCA 90 bp CCTATGAGCAACATCACCCGTCAGTCTCAGCTTTGTCCTGGGACAGGGGAGGGCCCAGTAGGGCATGCGTaGCAAAGGAGCATGGCAGCC +
Preference number: 4 (lower is better)
Translates to: PMSNITRQSQLCPGTGEGPVGHA*QRSMAA
Trigger: GGCTGCCATGCTCCTTTGTCACGCATGCCCTACTGG...GCCCTCCCCTGTCCCAGGACAAAGCTGAGACTGACGGGTGATGTTGCTCATAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp CCCAGTCTCTCATCAGTGACAGTACGTCGCAGCTGGGACGTCAGTGTTGCGTCGGCCGGTCCCGGTAGATaGGCAGGCCATTGGCACAAA +
Preference number: 4 (lower is better)
Translates to: PSLSSVTVRRSWDVSVASAGPGR*AGHWHK
Trigger: TTTGTGCCAATGGCCTGCTCATCTACCGGGACCGGC...CGACGCAACACTGACGTCCCAGCTGCGACGTACTGTCACTGATGAGAGACTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp TCGCAGCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTGCCAGGCAAAGCGGTTaGTTCTCAGCCGGTCCCGGT +
Preference number: 4 (lower is better)
Translates to: SQLGRQCCVGESRMKAPSARQSG*FSAGPG
Trigger: ACCGGGACCGGCTGAGAATCAACCGCTTTGCCTGGC...AGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGCTGCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp TCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTGGTGCAGGCCGGTCAATaGGGGCGCTGGCCTGGCGAG +
Preference number: 4 (lower is better)
Translates to: STIIVVWLAFLIWRGKGVVQAGQ*GRWPGE
Trigger: CTCGCCAGGCCAGCGCCCTCATTGACCGGCCTGCAC...CACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp TCGTCTGCTAACTGTAACGTGCAGAACCAGGGCGGGAGGGACTTCTACAATCATGTGCAGGCCGGTCAATaGGGGCGCTGGCCTGGCGAG +
Preference number: 4 (lower is better)
Translates to: SSANCNVQNQGGRDFYNHVQAGQ*GRWPGE
Trigger: CTCGCCAGGCCAGCGCCCTCATTGACCGGCCTGCAC...ATGATTGTAGAAGTCCCTCCCGCCCTGGTTCTGCACGTTACAGTTAGCAGACGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp TACGTCGCAGCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCGGGGACGTGGTGGTTTaGCTTTCTCCTCGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: YVAAGTSVLRRRIQNEGPGDVVV*LSPRSP
Trigger: AGGGCTCCGAGGAGAAAGTCAAACCACCACGTCCCC...GGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGCTGCGACGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp TACGTCGCAGCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCGAACTCCCTCCCCACTaGGGCACTCCCATCAACCTG +
Preference number: 4 (lower is better)
Translates to: YVAAGTSVLRRRIQNEGPELPPH*GTPINL
Trigger: CAGGTTGATGGGAGTGCCTCAGTGGGGAGGGAGTTC...GGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGCTGCGACGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp TACGTCGCAGCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTGTGGCAGACAAGCCTaGGGAAGCCCACGTGTGGCA +
Preference number: 4 (lower is better)
Translates to: YVAAGTSVLRRRIQNEGPCGRQA*GSPRVA
Trigger: TGCCACACGTGGGCTTCCTCAGGCTTGTCTGCCACA...GGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGCTGCGACGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp TACGTCGCAGCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCCAGGGGGAATGCCACTaGTTCTGCTGCCCCGCTGAA +
Preference number: 4 (lower is better)
Translates to: YVAAGTSVLRRRIQNEGPQGECH*FCCPAE
Trigger: TTCAGCGGGGCAGCAGAATCAGTGGCATTCCCCCTG...GGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGCTGCGACGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp CCTATGAGCAACATCACCCGTCAGTCTCAGCTTTGTCCTGGGACAGGGGAGGGCGCATCCGCGGGATGGTaGTTTCCCCAAACCCTGGTG +
Preference number: 4 (lower is better)
Translates to: PMSNITRQSQLCPGTGEGASAGW*FPQTLV
Trigger: CACCAGGGTTTGGGGAAATCACCATCCCGCGGATGC...GCCCTCCCCTGTCCCAGGACAAAGCTGAGACTGACGGGTGATGTTGCTCATAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp AACGTGCAGAACCAGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCGCGATTTCTGGGCCTTaGTGGGCGTGGTCCTCTCCG +
Preference number: 4 (lower is better)
Translates to: NVQNQGGRDFYNHRGLACAISGP*WAWSSP
Trigger: CGGAGAGGACCACGCCCAGCAAGGCCCAGAAATCGC...GCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCTGGTTCTGCACGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp TACGTCGCAGCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCCGAGCTCAGGCAGGCTaGGGGAGAAGTCTTCGAAGG +
Preference number: 4 (lower is better)
Translates to: YVAAGTSVLRRRIQNEGPRAQAG*GRSLRR
Trigger: CCTTCGAAGACTTCTCCCGCAGCCTGCCTGAGCTCG...GGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGCTGCGACGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp CCTATGAGCAACATCACCCGTCAGTCTCAGCTTTGTCCTGGGACAGGGGAGGGCTGGGATCATGGCAGCTaGCCCCTTCCCGGACTTGAG +
Preference number: 4 (lower is better)
Translates to: PMSNITRQSQLCPGTGEGWDHGS*PLPGLE
Trigger: CTCAAGTCCGGGAAGGGGGCAGCTGCCATGATCCCA...GCCCTCCCCTGTCCCAGGACAAAGCTGAGACTGACGGGTGATGTTGCTCATAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp CCCAGTCTCTCATCAGTGACAGTACGTCGCAGCTGGGACGTCAGTGTTGCGTCGTGGGATCATGGCAGCTaGCCCCTTCCCGGACTTGAG +
Preference number: 4 (lower is better)
Translates to: PSLSSVTVRRSWDVSVASWDHGS*PLPGLE
Trigger: CTCAAGTCCGGGAAGGGGGCAGCTGCCATGATCCCA...CGACGCAACACTGACGTCCCAGCTGCGACGTACTGTCACTGATGAGAGACTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp TCGCAGCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTGTCAGCCAACTGCTCTaGCAGCCCCAGCAGCAGTGC +
Preference number: 4 (lower is better)
Translates to: SQLGRQCCVGESRMKAPSVSQLL*QPQQQC
Trigger: GCACTGCTGCTGGGGCTGGCAGAGCAGTTGGCTGAC...AGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGCTGCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp CCGCCCTCAGGGACTTTTTCCACTATGCTACATGGCCTCCTGGGTGGAGAGGTGTTGCTGTCAGCCAACTaGTCTGCCAGCCCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: PPSGTFSTMLHGLLGGEVLLSAN*SASPSS
Trigger: GCTGCTGGGGCTGGCAGAGCAGTTGGCTGACAGCAA...CACCTCTCCACCCAGGAGGCCATGTAGCATAGTGGAAAAAGTCCCTGAGGGCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp CCTATGAGCAACATCACCCGTCAGTCTCAGCTTTGTCCTGGGACAGGGGAGGGCTTGCTGTCAGCCAACTaGTCTGCCAGCCCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: PMSNITRQSQLCPGTGEGLLSAN*SASPSS
Trigger: GCTGCTGGGGCTGGCAGAGCAGTTGGCTGACAGCAA...GCCCTCCCCTGTCCCAGGACAAAGCTGAGACTGACGGGTGATGTTGCTCATAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp CCCAGTCTCTCATCAGTGACAGTACGTCGCAGCTGGGACGTCAGTGTTGCGTCGTTGCTGTCAGCCAACTaGTCTGCCAGCCCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: PSLSSVTVRRSWDVSVASLLSAN*SASPSS
Trigger: GCTGCTGGGGCTGGCAGAGCAGTTGGCTGACAGCAA...CGACGCAACACTGACGTCCCAGCTGCGACGTACTGTCACTGATGAGAGACTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp GCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTAATGTGGGTGGCCGTGGCCTaGAGGGGTCACAGGGGTGGT +
Preference number: 4 (lower is better)
Translates to: AGTSVLRRRIQNEGPFLMWVAVA*RGHRGG
Trigger: ACCACCCCTGTGACCCCTGCAGGCCACGGCCACCCA...CATTAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000636016.2
CDS-3UTR GCA 90 bp TACGTCGCAGCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCGCGAGAGTGGGGAGATaGTCTCAGATGGGCCAGCCA +
Preference number: 4 (lower is better)
Translates to: YVAAGTSVLRRRIQNEGPARVGR*SQMGQP
Trigger: TGGCTGGCCCATCTGAGAGCATCTCCCCACTCTCGC...GGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGCTGCGACGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp TACGTCGCAGCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCGGCATCCCTGGGCTATaGCCCGATAGGTTGGCGAGA +
Preference number: 4 (lower is better)
Translates to: YVAAGTSVLRRRIQNEGPGIPGL*PDRLAR
Trigger: TCTCGCCAACCTATCGGGGCATAGCCCAGGGATGCC...GGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGCTGCGACGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp CTCCCCTCCCACCTTCTTCAGCCTGAGAATAGTCCCTGGCACAAGCAGGTAATCGTGGACCCACCGGCCTaGACCAGGGGGAATGCCACT +
Preference number: 4 (lower is better)
Translates to: LPSHLLQPENSPWHKQVIVDPPA*TRGNAT
Trigger: AGTGGCATTCCCCCTGGTGCAGGCCGGTGGGTCCAC...GATTACCTGCTTGTGCCAGGGACTATTCTCAGGCTGAAGAAGGTGGGAGGGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp TACGTCGCAGCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCCCTCCCTCGTGGCACTaGCTGCATCTCCGTAGAAGG +
Preference number: 4 (lower is better)
Translates to: YVAAGTSVLRRRIQNEGPPPSWH*LHLRRR
Trigger: CCTTCTACGGAGATGCAGGCAGTGCCACGAGGGAGG...GGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGCTGCGACGTA
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp AATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTGAGCAATCCTCTGTCCGGCTGTaGTGTGGCTGGCGGCGGCGG +
Preference number: 4 (lower is better)
Translates to: NHRGLACVSYLAGERGEQSSVRL*CGWRRR
Trigger: CCGCCGCCGCCAGCCACAGCACAGCCGGACAGAGGA...TTGCTCACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373946.7
CDS-3UTR CCA 90 bp CCAGGATGGTCACCCAGAACTCCTAACCGCCCTCAGGGACTTTTTCCACTATGCTCCAGCTCCCGGGTCTaGTTAGGGGCGAAGCGGAGC +
Preference number: 4 (lower is better)
Translates to: PGWSPRTPNRPQGLFPLCSSSRV*LGAKRS
Trigger: GCTCCGCTTCGCCCCTAACCAGACCCGGGAGCTGGA...GCATAGTGGAAAAAGTCCCTGAGGGCGGTTAGGAGTTCTGGGTGACCATCCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp GCAGCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTATCCAGCTCCCGGGTCTaGTTAGGGGCGAAGCGGAGC +
Preference number: 4 (lower is better)
Translates to: AAGTSVLRRRIQNEGPFLSSSRV*LGAKRS
Trigger: GCTCCGCTTCGCCCCTAACCAGACCCGGGAGCTGGA...TAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp TTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGCAGCTGGGACGTCAGTGTATGAGGGCGCTGGCCTaGCGAGTCTGTGCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: FPSQSLISDSTSQLGRQCMRALA*RVCAWV
Trigger: GACCCAGGCACAGACTCGCCAGGCCAGCGCCCTCAT...ACACTGACGTCCCAGCTGCGACGTACTGTCACTGATGAGAGACTGGGAAGGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp CAGAACCAGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCGTTTCTCTCGCTGACCGAGGCTaGGCGGGAGAACTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: QNQGGRDFYNHRGLACVSLADRG*AGELCS
Trigger: GGAGCAGAGTTCTCCCGCCCAGCCTCGGTCAGCGAG...AGAAACGCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCTGGTTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp GCTCGTCTGCTAACTGTAACGTGCAGAACCAGGGCGGGAGGGACTTCTACAATCCTCGCTGACCGAGGCTaGGCGGGAGAACTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: ARLLTVTCRTRAGGTSTILADRG*AGELCS
Trigger: GGAGCAGAGTTCTCCCGCCCAGCCTCGGTCAGCGAG...GATTGTAGAAGTCCCTCCCGCCCTGGTTCTGCACGTTACAGTTAGCAGACGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp CCCAGTCTCTCATCAGTGACAGTACGTCGCAGCTGGGACGTCAGTGTTGCGTCGGGCCCGGGGACGTGGTaGTTTGACTTTCTCCTCGGA +
Preference number: 4 (lower is better)
Translates to: PSLSSVTVRRSWDVSVASGPGTW*FDFLLG
Trigger: TCCGAGGAGAAAGTCAAACCACCACGTCCCCGGGCC...CGACGCAACACTGACGTCCCAGCTGCGACGTACTGTCACTGATGAGAGACTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp ACAAATGGAATTGCTCGTCTGCTAACTGTAACGTGCAGAACCAGGGCGGGAGGGGTGGGCCTGGGATCATaGCAGCTGCCCCCTTCCCGG +
Preference number: 4 (lower is better)
Translates to: TNGIARLLTVTCRTRAGGVGLGS*QLPPSR
Trigger: CCGGGAAGGGGGCAGCTGCCATGATCCCAGGCCCAC...CCCTCCCGCCCTGGTTCTGCACGTTACAGTTAGCAGACGAGCAATTCCATTTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp AGGTGTATGTCATCACTGACAAGCCAAAGGGACGCATCTAACCTGGGCCGCCTGCACCGTCTGTGGGCCTaGGATCATGGCAGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: RCMSSLTSQRDASNLGRLHRLWA*DHGSCP
Trigger: GGGGCAGCTGCCATGATCCCAGGCCCACAGACGGTG...CAGGCGGCCCAGGTTAGATGCGTCCCTTTGGCTTGTCAGTGATGACATACACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp CCAGGATGGTCACCCAGAACTCCTAACCGCCCTCAGGGACTTTTTCCACTATGCCGTGGCCACCGTCTGTaGGCCTGGGATCATGGCAGC +
Preference number: 4 (lower is better)
Translates to: PGWSPRTPNRPQGLFPLCRGHRL*AWDHGS
Trigger: GCTGCCATGATCCCAGGCCCACAGACGGTGGCCACG...GCATAGTGGAAAAAGTCCCTGAGGGCGGTTAGGAGTTCTGGGTGACCATCCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp CCACCATCTTCTACAATGGCTGAGAGCACCACCTCCCTTTGGATATGGAGTTGGGCCTCTGGGTGGCCGTaGCCTGCAGGGGTCACAGGG +
Preference number: 4 (lower is better)
Translates to: PPSSTMAESTTSLWIWSWASGWP*PAGVTG
Trigger: CCCTGTGACCCCTGCAGGCCACGGCCACCCAGAGGC...CCAACTCCATATCCAAAGGGAGGTGGTGCTCTCAGCCATTGTAGAAGATGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000636016.2
CDS-3UTR CCA 90 bp GCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTAATGGGGACGCATCTAACCTaGGCCGCCTGGGGGCATCCC +
Preference number: 4 (lower is better)
Translates to: AGTSVLRRRIQNEGPFLMGTHLT*AAWGHP
Trigger: GGGATGCCCCCAGGCGGCCCAGGTTAGATGCGTCCC...CATTAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp AACCAGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTGTCAGTCAGGCACCTaGCGGCGGCGGCGCGGCTTC +
Preference number: 4 (lower is better)
Translates to: NQGGRDFYNHRGLACVSYCQSGT*RRRRGF
Trigger: GAAGCCGCGCCGCCGCCGCCAGGTGCCTGACTGACA...ATAAGAAACGCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCTGGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
CDS-3UTR CCA 90 bp TTCAGTGTGCTCAGGACTCCTGGTTCCTGCAAAGATGAGTTCCTAGACCGAAGTGGAAGGGCGCAGGCCTaGGGGTCGGGATGCACGCCC +
Preference number: 4 (lower is better)
Translates to: FSVLRTPGSCKDEFLDRSGRAQA*GSGCTP
Trigger: GGGCGTGCATCCCGACCCCCAGGCCTGCGCCCTTCC...ACTTCGGTCTAGGAACTCATCTTTGCAGGAACCAGGAGTCCTGAGCACACTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS-3UTR TCA 90 bp TACGTCGCAGCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCCGAAGCGGAGCTCGCTaGCATAGTTGCCCACATGCT +
Preference number: 4 (lower is better)
Translates to: YVAAGTSVLRRRIQNEGPRSGAR*HSCPHA
Trigger: AGCATGTGGGCAACTATGTCAGCGAGCTCCGCTTCG...GGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGCTGCGACGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp AACGTGCAGAACCAGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCGCCGGTCCCGGTAGATaGGCAGGCCATTGGCACAAA +
Preference number: 4 (lower is better)
Translates to: NVQNQGGRDFYNHRGLACAGPGR*AGHWHK
Trigger: TTTGTGCCAATGGCCTGCTCATCTACCGGGACCGGC...GCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCTGGTTCTGCACGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp CCAGGATGGTCACCCAGAACTCCTAACCGCCCTCAGGGACTTTTTCCACTATGCGCCAGGCAAAGCGGTTaGTTCTCAGCCGGTCCCGGT +
Preference number: 4 (lower is better)
Translates to: PGWSPRTPNRPQGLFPLCARQSG*FSAGPG
Trigger: ACCGGGACCGGCTGAGAATCAACCGCTTTGCCTGGC...GCATAGTGGAAAAAGTCCCTGAGGGCGGTTAGGAGTTCTGGGTGACCATCCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp TCATCAGTGACAGTACGTCGCAGCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGCCAGGCAAAGCGGTTaGTTCTCAGCCGGTCCCGGT +
Preference number: 4 (lower is better)
Translates to: SSVTVRRSWDVSVASENPARQSG*FSAGPG
Trigger: ACCGGGACCGGCTGAGAATCAACCGCTTTGCCTGGC...TGGATTCTCCGACGCAACACTGACGTCCCAGCTGCGACGTACTGTCACTGATGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp TACACTGAACCCGTCAGCCCCTACTGTGAGCCAACCCACACCCAGAGTCCAGGTCCACAGTCTCTTGGCTaGCCGGTGGTTTGGGAGCTT +
Preference number: 4 (lower is better)
Translates to: YTEPVSPYCEPTHTQSPGPQSLG*PVVWEL
Trigger: AAGCTCCCAAACCACCGGTCAGCCAAGAGACTGTGG...ACCTGGACTCTGGGTGTGGGTTGGCTCACAGTAGGGGCTGACGGGTTCAGTGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp ACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTAATGGTTCTCGTGCAGGCCGGTCAATaGGGGCGCTGGCCTGGCGAG +
Preference number: 4 (lower is better)
Translates to: TSVLRRRIQNEGPFLMVLVQAGQ*GRWPGE
Trigger: CTCGCCAGGCCAGCGCCCTCATTGACCGGCCTGCAC...GAGAACCATTAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp TCATCAGTGACAGTACGTCGCAGCTGGGACGTCAGTGTTGCGTCGGAGAATCCACATCATGGTTCTCGCTaGCCGAGGCTGGGCGGGAGA +
Preference number: 4 (lower is better)
Translates to: SSVTVRRSWDVSVASENPHHGSR*PRLGGR
Trigger: TCTCCCGCCCAGCCTCGGTCAGCGAGAACCATGATG...TGGATTCTCCGACGCAACACTGACGTCCCAGCTGCGACGTACTGTCACTGATGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp GCTCGTCTGCTAACTGTAACGTGCAGAACCAGGGCGGGAGGGACTTCTACAATCCATCATGGTTCTCGCTaGCCGAGGCTGGGCGGGAGA +
Preference number: 4 (lower is better)
Translates to: ARLLTVTCRTRAGGTSTIHHGSR*PRLGGR
Trigger: TCTCCCGCCCAGCCTCGGTCAGCGAGAACCATGATG...GATTGTAGAAGTCCCTCCCGCCCTGGTTCTGCACGTTACAGTTAGCAGACGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp TTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGCAGCTGGGACGTCAGTGTTGGGGGCCCCCTTGTTaGGATCCCGGGAGAACAGCA +
Preference number: 4 (lower is better)
Translates to: FPSQSLISDSTSQLGRQCWGPPC*DPGRTA
Trigger: TGCTGTTCTCCCGGGATCTCAACAAGGGGGCCCCCA...ACACTGACGTCCCAGCTGCGACGTACTGTCACTGATGAGAGACTGGGAAGGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp CTCCCCTCCCACCTTCTTCAGCCTGAGAATAGTCCCTGGCACAAGCAGGTAATCTGGGGGCCCCCTTGTTaGGATCCCGGGAGAACAGCA +
Preference number: 4 (lower is better)
Translates to: LPSHLLQPENSPWHKQVIWGPPC*DPGRTA
Trigger: TGCTGTTCTCCCGGGATCTCAACAAGGGGGCCCCCA...GATTACCTGCTTGTGCCAGGGACTATTCTCAGGCTGAAGAAGGTGGGAGGGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp CCTATGAGCAACATCACCCGTCAGTCTCAGCTTTGTCCTGGGACAGGGGAGGGCGCCAGGGCCTGGTCTTaGTCGACATCTTCATCCCCA +
Preference number: 4 (lower is better)
Translates to: PMSNITRQSQLCPGTGEGARAWS*STSSSP
Trigger: TGGGGATGAAGATGTCGATCAAGACCAGGCCCTGGC...GCCCTCCCCTGTCCCAGGACAAAGCTGAGACTGACGGGTGATGTTGCTCATAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp TACGTCGCAGCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCCCAGTCTCTCATCAGTaGCAGTACGTCGCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: YVAAGTSVLRRRIQNEGPPVSHQ*QYVAAG
Trigger: CCCAGCTGCGACGTACTGTCACTGATGAGAGACTGG...GGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGCTGCGACGTA
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp AACGTGCAGAACCAGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCCCCCCTTCCCGGACTTaGGACTGTTCTCCATGGTGG +
Preference number: 4 (lower is better)
Translates to: NVQNQGGRDFYNHRGLACPPSRT*DCSPWW
Trigger: CCACCATGGAGAACAGTCTCAAGTCCGGGAAGGGGG...GCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCTGGTTCTGCACGTT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp CCCTGCCCCAAAGCCAGGTGCAAAATCCACAACAAGGATCCTCCCTCTGAGGTGCCCCCTTCCCGGACTTaGGACTGTTCTCCATGGTGG +
Preference number: 4 (lower is better)
Translates to: PCPKARCKIHNKDPPSEVPPSRT*DCSPWW
Trigger: CCACCATGGAGAACAGTCTCAAGTCCGGGAAGGGGG...CACCTCAGAGGGAGGATCCTTGTTGTGGATTTTGCACCTGGCTTTGGGGCAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000636016.2
CDS-3UTR TCA 90 bp CTCCCCTCCCACCTTCTTCAGCCTGAGAATAGTCCCTGGCACAAGCAGGTAATCCGTCAGCCCCTACTGTaGGCCAACCCACACCCAGAG +
Preference number: 4 (lower is better)
Translates to: LPSHLLQPENSPWHKQVIRQPLL*ANPHPE
Trigger: CTCTGGGTGTGGGTTGGCTCACAGTAGGGGCTGACG...GATTACCTGCTTGTGCCAGGGACTATTCTCAGGCTGAAGAAGGTGGGAGGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp CCGCCCTCAGGGACTTTTTCCACTATGCTACATGGCCTCCTGGGTGGAGAGGTGTCAGGGTCTGCCCCATaGAGCCTCCTTACCATGGCT +
Preference number: 4 (lower is better)
Translates to: PPSGTFSTMLHGLLGGEVSGSAP*SLLTMA
Trigger: AGCCATGGTAAGGAGGCTTCATGGGGCAGACCCTGA...CACCTCTCCACCCAGGAGGCCATGTAGCATAGTGGAAAAAGTCCCTGAGGGCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp GCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTAATGGGCGAAGCCCAGGTCTaGGAGCGTACTCCGCTGCTG +
Preference number: 4 (lower is better)
Translates to: AGTSVLRRRIQNEGPFLMGEAQV*ERTPLL
Trigger: CAGCAGCGGAGTACGCTCTCAGACCTGGGCTTCGCC...CATTAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS-3UTR GCA 90 bp TCATCAGTGACAGTACGTCGCAGCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGCCCGTGATGATGTCTaGCCGCAGCTGCAGGCACAG +
Preference number: 4 (lower is better)
Translates to: SSVTVRRSWDVSVASENPARDDV*PQLQAQ
Trigger: CTGTGCCTGCAGCTGCGGGCAGACATCATCACGGGC...TGGATTCTCCGACGCAACACTGACGTCCCAGCTGCGACGTACTGTCACTGATGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp CTCCCCTCCCACCTTCTTCAGCCTGAGAATAGTCCCTGGCACAAGCAGGTAATCGCCCGTGATGATGTCTaGCCGCAGCTGCAGGCACAG +
Preference number: 4 (lower is better)
Translates to: LPSHLLQPENSPWHKQVIARDDV*PQLQAQ
Trigger: CTGTGCCTGCAGCTGCGGGCAGACATCATCACGGGC...GATTACCTGCTTGTGCCAGGGACTATTCTCAGGCTGAAGAAGGTGGGAGGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp CCCAGTCTCTCATCAGTGACAGTACGTCGCAGCTGGGACGTCAGTGTTGCGTCGGTCACCGTCAGGCCCTaGATCATGGTTCTCGCTGAC +
Preference number: 4 (lower is better)
Translates to: PSLSSVTVRRSWDVSVASVTVRP*IMVLAD
Trigger: GTCAGCGAGAACCATGATGCAGGGCCTGACGGTGAC...CGACGCAACACTGACGTCCCAGCTGCGACGTACTGTCACTGATGAGAGACTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp TCATCAGTGACAGTACGTCGCAGCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGCGGAGACTCTGGTCTaGAGTACGGCCTCCGGCTCA +
Preference number: 4 (lower is better)
Translates to: SSVTVRRSWDVSVASENPAETLV*STASGS
Trigger: TGAGCCGGAGGCCGTACTGCAGACCAGAGTCTCCGC...TGGATTCTCCGACGCAACACTGACGTCCCAGCTGCGACGTACTGTCACTGATGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp CCAGGATGGTCACCCAGAACTCCTAACCGCCCTCAGGGACTTTTTCCACTATGCGTCAGCCAACTGCTCTaGCAGCCCCAGCAGCAGTGC +
Preference number: 4 (lower is better)
Translates to: PGWSPRTPNRPQGLFPLCVSQLL*QPQQQC
Trigger: GCACTGCTGCTGGGGCTGGCAGAGCAGTTGGCTGAC...GCATAGTGGAAAAAGTCCCTGAGGGCGGTTAGGAGTTCTGGGTGACCATCCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp TCATCAGTGACAGTACGTCGCAGCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGTCAGCCAACTGCTCTaGCAGCCCCAGCAGCAGTGC +
Preference number: 4 (lower is better)
Translates to: SSVTVRRSWDVSVASENPVSQLL*QPQQQC
Trigger: GCACTGCTGCTGGGGCTGGCAGAGCAGTTGGCTGAC...TGGATTCTCCGACGCAACACTGACGTCCCAGCTGCGACGTACTGTCACTGATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp TACGTCGCAGCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCCTGCTAACTGTAACGTaGAGAACCAGGGCGGGAGGG +
Preference number: 4 (lower is better)
Translates to: YVAAGTSVLRRRIQNEGPLLTVT*RTRAGG
Trigger: CCCTCCCGCCCTGGTTCTGCACGTTACAGTTAGCAG...GGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGCTGCGACGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp CCCTGCCCCAAAGCCAGGTGCAAAATCCACAACAAGGATCCTCCCTCTGAGGTGGGCATCCCTGGGCTATaGCCCGATAGGTTGGCGAGA +
Preference number: 4 (lower is better)
Translates to: PCPKARCKIHNKDPPSEVGIPGL*PDRLAR
Trigger: TCTCGCCAACCTATCGGGGCATAGCCCAGGGATGCC...CACCTCAGAGGGAGGATCCTTGTTGTGGATTTTGCACCTGGCTTTGGGGCAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp AACGTGCAGAACCAGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCCCTCCCTCGTGGCACTaGCTGCATCTCCGTAGAAGG +
Preference number: 4 (lower is better)
Translates to: NVQNQGGRDFYNHRGLACPPSWH*LHLRRR
Trigger: CCTTCTACGGAGATGCAGGCAGTGCCACGAGGGAGG...GCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCTGGTTCTGCACGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp TTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTGCCCTCCCTCAGCCCTaGTCTCTGAGGGCCCGAGGG +
Preference number: 4 (lower is better)
Translates to: FYNHRGLACVSYLAGERGALPQP*SLRARG
Trigger: CCCTCGGGCCCTCAGAGAGCAGGGCTGAGGGAGGGC...ACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS-3UTR CCA 90 bp TCGCAGCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTTCTGGGGCGATTTCTaGGCCTTGCTGGGCGTGGTC +
Preference number: 4 (lower is better)
Translates to: SQLGRQCCVGESRMKAPSFWGDF*ALLGVV
Trigger: GACCACGCCCAGCAAGGCCCAGAAATCGCCCCAGAA...AGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGCTGCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp GCTCGTCTGCTAACTGTAACGTGCAGAACCAGGGCGGGAGGGACTTCTACAATCTCACCAGGAAGCCCTTaGGTGGGGGCTCAGGGGACA +
Preference number: 4 (lower is better)
Translates to: ARLLTVTCRTRAGGTSTISPGSP*VGAQGT
Trigger: TGTCCCCTGAGCCCCCACCCAAGGGCTTCCTGGTGA...GATTGTAGAAGTCCCTCCCGCCCTGGTTCTGCACGTTACAGTTAGCAGACGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp GCAGCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTATCACCAGGAAGCCCTTaGGTGGGGGCTCAGGGGACA +
Preference number: 4 (lower is better)
Translates to: AAGTSVLRRRIQNEGPFLSPGSP*VGAQGT
Trigger: TGTCCCCTGAGCCCCCACCCAAGGGCTTCCTGGTGA...TAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp CCCAGTCTCTCATCAGTGACAGTACGTCGCAGCTGGGACGTCAGTGTTGCGTCGTCAGGCCCTGCATCATaGTTCTCGCTGACCGAGGCT +
Preference number: 4 (lower is better)
Translates to: PSLSSVTVRRSWDVSVASSGPAS*FSLTEA
Trigger: AGCCTCGGTCAGCGAGAACCATGATGCAGGGCCTGA...CGACGCAACACTGACGTCCCAGCTGCGACGTACTGTCACTGATGAGAGACTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp TCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTGGCCTGTGTCACTCTCTaGGGCCCGGGGACGTGGTGG +
Preference number: 4 (lower is better)
Translates to: STIIVVWLAFLIWRGKGVACVTL*GPGTWW
Trigger: CCACCACGTCCCCGGGCCCCAGAGAGTGACACAGGC...CACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp TCGTCTGCTAACTGTAACGTGCAGAACCAGGGCGGGAGGGACTTCTACAATCATGCCTGTGTCACTCTCTaGGGCCCGGGGACGTGGTGG +
Preference number: 4 (lower is better)
Translates to: SSANCNVQNQGGRDFYNHACVTL*GPGTWW
Trigger: CCACCACGTCCCCGGGCCCCAGAGAGTGACACAGGC...ATGATTGTAGAAGTCCCTCCCGCCCTGGTTCTGCACGTTACAGTTAGCAGACGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp CCTATGAGCAACATCACCCGTCAGTCTCAGCTTTGTCCTGGGACAGGGGAGGGCTCCCTCTCCTGGTCCTaGTCCTCATCGCCTGTGTCA +
Preference number: 4 (lower is better)
Translates to: PMSNITRQSQLCPGTGEGSLSWS*SSSPVS
Trigger: TGACACAGGCGATGAGGACCAGGACCAGGAGAGGGA...GCCCTCCCCTGTCCCAGGACAAAGCTGAGACTGACGGGTGATGTTGCTCATAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp CCGCCCTCAGGGACTTTTTCCACTATGCTACATGGCCTCCTGGGTGGAGAGGTGTTCACGGGCTCAAACTaGGGCATATCCGGGGTGGAG +
Preference number: 4 (lower is better)
Translates to: PPSGTFSTMLHGLLGGEVFTGSN*GISGVE
Trigger: CTCCACCCCGGATATGCCCCAGTTTGAGCCCGTGAA...CACCTCTCCACCCAGGAGGCCATGTAGCATAGTGGAAAAAGTCCCTGAGGGCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp CCCAGTCTCTCATCAGTGACAGTACGTCGCAGCTGGGACGTCAGTGTTGCGTCGTTCACGGGCTCAAACTaGGGCATATCCGGGGTGGAG +
Preference number: 4 (lower is better)
Translates to: PSLSSVTVRRSWDVSVASFTGSN*GISGVE
Trigger: CTCCACCCCGGATATGCCCCAGTTTGAGCCCGTGAA...CGACGCAACACTGACGTCCCAGCTGCGACGTACTGTCACTGATGAGAGACTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp TCGTCTGCTAACTGTAACGTGCAGAACCAGGGCGGGAGGGACTTCTACAATCATGTGGGCCTGGGATCATaGCAGCTGCCCCCTTCCCGG +
Preference number: 4 (lower is better)
Translates to: SSANCNVQNQGGRDFYNHVGLGS*QLPPSR
Trigger: CCGGGAAGGGGGCAGCTGCCATGATCCCAGGCCCAC...ATGATTGTAGAAGTCCCTCCCGCCCTGGTTCTGCACGTTACAGTTAGCAGACGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp AGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGGTGGGCCTGGGATCATaGCAGCTGCCCCCTTCCCGG +
Preference number: 4 (lower is better)
Translates to: RAGGTSTIIVVWLAFLIWVGLGS*QLPPSR
Trigger: CCGGGAAGGGGGCAGCTGCCATGATCCCAGGCCCAC...CCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp GCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTAATGCGTGGCCACCGTCTGTaGGCCTGGGATCATGGCAGC +
Preference number: 4 (lower is better)
Translates to: AGTSVLRRRIQNEGPFLMRGHRL*AWDHGS
Trigger: GCTGCCATGATCCCAGGCCCACAGACGGTGGCCACG...CATTAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp AACGTGCAGAACCAGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCGAGAACGGATTTCCGTaGCCACCGTCTGTGGGCCTG +
Preference number: 4 (lower is better)
Translates to: NVQNQGGRDFYNHRGLACENGFP*PPSVGL
Trigger: CAGGCCCACAGACGGTGGCCACGGAAATCCGTTCTC...GCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCTGGTTCTGCACGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp TTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGCAGCTGGGACGTCAGTGTACACTCAGGGGGAGTTaGAGTGGACCCACCGGCCTG +
Preference number: 4 (lower is better)
Translates to: FPSQSLISDSTSQLGRQCTLRGS*SGPTGL
Trigger: CAGGCCGGTGGGTCCACTCCAACTCCCCCTGAGTGT...ACACTGACGTCCCAGCTGCGACGTACTGTCACTGATGAGAGACTGGGAAGGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp CCGCCCTCAGGGACTTTTTCCACTATGCTACATGGCCTCCTGGGTGGAGAGGTGGTTCCTAGACCGAAGTaGCCCAGAGAGGATGGAGCC +
Preference number: 4 (lower is better)
Translates to: PPSGTFSTMLHGLLGGEVVPRPK*PREDGA
Trigger: GGCTCCATCCTCTCTGGGCCACTTCGGTCTAGGAAC...CACCTCTCCACCCAGGAGGCCATGTAGCATAGTGGAAAAAGTCCCTGAGGGCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp CCCAGTCTCTCATCAGTGACAGTACGTCGCAGCTGGGACGTCAGTGTTGCGTCGTCCGGATCTGCTTCTTaGTCTCCTTGGAGGGGTCCA +
Preference number: 4 (lower is better)
Translates to: PSLSSVTVRRSWDVSVASSGSAS*SPWRGP
Trigger: TGGACCCCTCCAAGGAGATCAAGAAGCAGATCCGGA...CGACGCAACACTGACGTCCCAGCTGCGACGTACTGTCACTGATGAGAGACTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp GCAGCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTACCAGTAGGGCATGCGTaGCAAAGGAGCATGGCAGCC +
Preference number: 4 (lower is better)
Translates to: AAGTSVLRRRIQNEGPFLPVGHA*QRSMAA
Trigger: GGCTGCCATGCTCCTTTGTCACGCATGCCCTACTGG...TAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp GCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTAATGGCCAGGCAAAGCGGTTaGTTCTCAGCCGGTCCCGGT +
Preference number: 4 (lower is better)
Translates to: AGTSVLRRRIQNEGPFLMARQSG*FSAGPG
Trigger: ACCGGGACCGGCTGAGAATCAACCGCTTTGCCTGGC...CATTAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp AACGTGCAGAACCAGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCCTCGATCCCGGTGGATaGGTTTGCTGTTGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: NVQNQGGRDFYNHRGLACLDPGG*VCCWAP
Trigger: AGGAGCCCAACAGCAAACTCATCCACCGGGATCGAG...GCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCTGGTTCTGCACGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp AGGTGTATGTCATCACTGACAAGCCAAAGGGACGCATCTAACCTGGGCCGCCTGGGGGACGTGGTGGTTTaGCTTTCTCCTCGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: RCMSSLTSQRDASNLGRLGDVVV*LSPRSP
Trigger: AGGGCTCCGAGGAGAAAGTCAAACCACCACGTCCCC...CAGGCGGCCCAGGTTAGATGCGTCCCTTTGGCTTGTCAGTGATGACATACACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp CTGCTCTGCCAGCCCCAGCAGCAGTGCAAGGATGCGGTGTTTCCTGTATATATAGGTGGTGGTGGAGGTTaGGAGGGTTTCCGCAGTGGC +
Preference number: 4 (lower is better)
Translates to: LLCQPQQQCKDAVFPVYIGGGGG*EGFRSG
Trigger: GCCACTGCGGAAACCCTCTCAACCTCCACCACCACC...TATATATACAGGAAACACCGCATCCTTGCACTGCTGCTGGGGCTGGCAGAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp GAGGCGGGAGAGAGGAAGGTAGGTTTTGCAGCCCAGTGTCAAGATCCAGAAAGTGGTGGTGGTGGAGGTTaGGAGGGTTTCCGCAGTGGC +
Preference number: 4 (lower is better)
Translates to: EAGERKVGFAAQCQDPESGGGGG*EGFRSG
Trigger: GCCACTGCGGAAACCCTCTCAACCTCCACCACCACC...ACTTTCTGGATCTTGACACTGGGCTGCAAAACCTACCTTCCTCTCTCCCGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp CCTATGAGCAACATCACCCGTCAGTCTCAGCTTTGTCCTGGGACAGGGGAGGGCCAGAGCTGGAGCCTATaGGCAACATCACCCGTCAGT +
Preference number: 4 (lower is better)
Translates to: PMSNITRQSQLCPGTGEGQSWSL*ATSPVS
Trigger: ACTGACGGGTGATGTTGCTCATAGGCTCCAGCTCTG...GCCCTCCCCTGTCCCAGGACAAAGCTGAGACTGACGGGTGATGTTGCTCATAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp TTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGCAGCTGGGACGTCAGTGTTGTGGCAGACAAGCCTaGGGAAGCCCACGTGTGGCA +
Preference number: 4 (lower is better)
Translates to: FPSQSLISDSTSQLGRQCCGRQA*GSPRVA
Trigger: TGCCACACGTGGGCTTCCTCAGGCTTGTCTGCCACA...ACACTGACGTCCCAGCTGCGACGTACTGTCACTGATGAGAGACTGGGAAGGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp CCTATGAGCAACATCACCCGTCAGTCTCAGCTTTGTCCTGGGACAGGGGAGGGCCAAGGATCCTCCCTCTaGGGTGTGTTCAGTGTGCTC +
Preference number: 4 (lower is better)
Translates to: PMSNITRQSQLCPGTGEGQGSSL*GVFSVL
Trigger: GAGCACACTGAACACACCTCAGAGGGAGGATCCTTG...GCCCTCCCCTGTCCCAGGACAAAGCTGAGACTGACGGGTGATGTTGCTCATAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp CAGAACCAGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCGTTTCTGCATCCGCGGGATGGTaGTTTCCCCAAACCCTGGTG +
Preference number: 4 (lower is better)
Translates to: QNQGGRDFYNHRGLACVSASAGW*FPQTLV
Trigger: CACCAGGGTTTGGGGAAATCACCATCCCGCGGATGC...AGAAACGCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCTGGTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp AAGACTGAAAACCAAGGCAAGCCCCGTAGGGAGATAAGGACTAAGCCAGGGACCTACAGCACGGAGCACTaGGGTGGGGGAGCATGGGGA +
Preference number: 4 (lower is better)
Translates to: KTENQGKPRREIRTKPGTYSTEH*GGGAWG
Trigger: TCCCCATGCTCCCCCACCTCAGTGCTCCGTGCTGTA...GGTCCCTGGCTTAGTCCTTATCTCCCTACGGGGCTTGCCTTGGTTTTCAGTCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp AAGACTGAAAACCAAGGCAAGCCCCGTAGGGAGATAAGGACTAAGCCAGGGACCGTGACCAGCACGCCTTaGGCTCCGCATCTCCCCACA +
Preference number: 4 (lower is better)
Translates to: KTENQGKPRREIRTKPGTVTSTP*APHLPT
Trigger: TGTGGGGAGATGCGGAGCTCAAGGCGTGCTGGTCAC...GGTCCCTGGCTTAGTCCTTATCTCCCTACGGGGCTTGCCTTGGTTTTCAGTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373946.7
CDS-3UTR GCA 90 bp ACAAATGGAATTGCTCGTCTGCTAACTGTAACGTGCAGAACCAGGGCGGGAGGGGGCCTGGCGAGTCTGTaGCTGGGTCCTCCCACTGTA +
Preference number: 4 (lower is better)
Translates to: TNGIARLLTVTCRTRAGGGLASL*LGPPTV
Trigger: TACAGTGGGAGGACCCAGGCACAGACTCGCCAGGCC...CCCTCCCGCCCTGGTTCTGCACGTTACAGTTAGCAGACGAGCAATTCCATTTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp CTGCTCTGCCAGCCCCAGCAGCAGTGCAAGGATGCGGTGTTTCCTGTATATATAGGCCTGGCGAGTCTGTaGCTGGGTCCTCCCACTGTA +
Preference number: 4 (lower is better)
Translates to: LLCQPQQQCKDAVFPVYIGLASL*LGPPTV
Trigger: TACAGTGGGAGGACCCAGGCACAGACTCGCCAGGCC...TATATATACAGGAAACACCGCATCCTTGCACTGCTGCTGGGGCTGGCAGAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp AACGTGCAGAACCAGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCGTCACCGTCAGGCCCTaGATCATGGTTCTCGCTGAC +
Preference number: 4 (lower is better)
Translates to: NVQNQGGRDFYNHRGLACVTVRP*IMVLAD
Trigger: GTCAGCGAGAACCATGATGCAGGGCCTGACGGTGAC...GCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCTGGTTCTGCACGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp TCATCAGTGACAGTACGTCGCAGCTGGGACGTCAGTGTTGCGTCGGAGAATCCACGAGCTCAGGCAGGCTaGGGGAGAAGTCTTCGAAGG +
Preference number: 4 (lower is better)
Translates to: SSVTVRRSWDVSVASENPRAQAG*GRSLRR
Trigger: CCTTCGAAGACTTCTCCCGCAGCCTGCCTGAGCTCG...TGGATTCTCCGACGCAACACTGACGTCCCAGCTGCGACGTACTGTCACTGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp GAGGCGGGAGAGAGGAAGGTAGGTTTTGCAGCCCAGTGTCAAGATCCAGAAAGTGCGGAGACTCTGGTCTaGAGTACGGCCTCCGGCTCA +
Preference number: 4 (lower is better)
Translates to: EAGERKVGFAAQCQDPESAETLV*STASGS
Trigger: TGAGCCGGAGGCCGTACTGCAGACCAGAGTCTCCGC...ACTTTCTGGATCTTGACACTGGGCTGCAAAACCTACCTTCCTCTCTCCCGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp CCCTGCCCCAAAGCCAGGTGCAAAATCCACAACAAGGATCCTCCCTCTGAGGTGCAGCCCCAGCAGCAGTaGAAGGATGCGGTGTTTCCT +
Preference number: 4 (lower is better)
Translates to: PCPKARCKIHNKDPPSEVQPQQQ*KDAVFP
Trigger: AGGAAACACCGCATCCTTGCACTGCTGCTGGGGCTG...CACCTCAGAGGGAGGATCCTTGTTGTGGATTTTGCACCTGGCTTTGGGGCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp TCGCAGCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTCAGCCCCAGCAGCAGTaGAAGGATGCGGTGTTTCCT +
Preference number: 4 (lower is better)
Translates to: SQLGRQCCVGESRMKAPSQPQQQ*KDAVFP
Trigger: AGGAAACACCGCATCCTTGCACTGCTGCTGGGGCTG...AGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGCTGCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp AACGTGCAGAACCAGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCCAGCCCCAGCAGCAGTaGAAGGATGCGGTGTTTCCT +
Preference number: 4 (lower is better)
Translates to: NVQNQGGRDFYNHRGLACQPQQQ*KDAVFP
Trigger: AGGAAACACCGCATCCTTGCACTGCTGCTGGGGCTG...GCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCTGGTTCTGCACGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp CCCTGCCCCAAAGCCAGGTGCAAAATCCACAACAAGGATCCTCCCTCTGAGGTGCTGCTAACTGTAACGTaGAGAACCAGGGCGGGAGGG +
Preference number: 4 (lower is better)
Translates to: PCPKARCKIHNKDPPSEVLLTVT*RTRAGG
Trigger: CCCTCCCGCCCTGGTTCTGCACGTTACAGTTAGCAG...CACCTCAGAGGGAGGATCCTTGTTGTGGATTTTGCACCTGGCTTTGGGGCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp GCATTCAAGTGGGCCTTAGAGATGCTGGAGAAGAACAAATGGAATTGCTCGTCTGGTCGCGGCGGGCTCTaGGGAGCAGCCTGTTCGGCG +
Preference number: 4 (lower is better)
Translates to: AFKWALEMLEKNKWNCSSGRGGL*GAACSA
Trigger: CGCCGAACAGGCTGCTCCGCAGAGCCCGCCGCGACC...AGACGAGCAATTCCATTTGTTCTTCTCCAGCATCTCTAAGGCCCACTTGAATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338074.7
ENST00000636016.2
CDS-3UTR GCA 90 bp AACGTGCAGAACCAGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCCTCGGCGTGGTTTCCTaGTCCGGCTTTAGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: NVQNQGGRDFYNHRGLACLGVVS*SGFSSL
Trigger: CAAGGAGCTAAAGCCGGAGCAGGAAACCACGCCGAG...GCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCTGGTTCTGCACGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000636016.2
CDS-3UTR GCA 90 bp CTCCCCTCCCACCTTCTTCAGCCTGAGAATAGTCCCTGGCACAAGCAGGTAATCGCGAGAGTGGGGAGATaGTCTCAGATGGGCCAGCCA +
Preference number: 4 (lower is better)
Translates to: LPSHLLQPENSPWHKQVIARVGR*SQMGQP
Trigger: TGGCTGGCCCATCTGAGAGCATCTCCCCACTCTCGC...GATTACCTGCTTGTGCCAGGGACTATTCTCAGGCTGAAGAAGGTGGGAGGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp AGGTGTATGTCATCACTGACAAGCCAAAGGGACGCATCTAACCTGGGCCGCCTGGCGAGAGTGGGGAGATaGTCTCAGATGGGCCAGCCA +
Preference number: 4 (lower is better)
Translates to: RCMSSLTSQRDASNLGRLARVGR*SQMGQP
Trigger: TGGCTGGCCCATCTGAGAGCATCTCCCCACTCTCGC...CAGGCGGCCCAGGTTAGATGCGTCCCTTTGGCTTGTCAGTGATGACATACACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp CCCAGTCTCTCATCAGTGACAGTACGTCGCAGCTGGGACGTCAGTGTTGCGTCGGCTATTCTGATTTCCTaGCCTGCCTCAGGCCAGCAC +
Preference number: 4 (lower is better)
Translates to: PSLSSVTVRRSWDVSVASAILIS*PASGQH
Trigger: GTGCTGGCCTGAGGCAGGGCAGGAAATCAGAATAGC...CGACGCAACACTGACGTCCCAGCTGCGACGTACTGTCACTGATGAGAGACTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp TACACTGAACCCGTCAGCCCCTACTGTGAGCCAACCCACACCCAGAGTCCAGGTGCTATTCTGATTTCCTaGCCTGCCTCAGGCCAGCAC +
Preference number: 4 (lower is better)
Translates to: YTEPVSPYCEPTHTQSPGAILIS*PASGQH
Trigger: GTGCTGGCCTGAGGCAGGGCAGGAAATCAGAATAGC...ACCTGGACTCTGGGTGTGGGTTGGCTCACAGTAGGGGCTGACGGGTTCAGTGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp CCACCATCTTCTACAATGGCTGAGAGCACCACCTCCCTTTGGATATGGAGTTGGGTGGACCCACCGGCCTaGACCAGGGGGAATGCCACT +
Preference number: 4 (lower is better)
Translates to: PPSSTMAESTTSLWIWSWVDPPA*TRGNAT
Trigger: AGTGGCATTCCCCCTGGTGCAGGCCGGTGGGTCCAC...CCAACTCCATATCCAAAGGGAGGTGGTGCTCTCAGCCATTGTAGAAGATGGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp TTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGCAGCTGGGACGTCAGTGTCCTCGTGGCACTGCCTaGATCTCCGTAGAAGGGAGG +
Preference number: 4 (lower is better)
Translates to: FPSQSLISDSTSQLGRQCPRGTA*ISVEGR
Trigger: CCTCCCTTCTACGGAGATGCAGGCAGTGCCACGAGG...ACACTGACGTCCCAGCTGCGACGTACTGTCACTGATGAGAGACTGGGAAGGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp TTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTAATGGTTCTCTGGCTTGGGGAGGACGTCCACCTCTaGTGGCCTGGTCCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: LRRRIQNEGPFLMVLWLGEDVHL*WPGPWS
Trigger: GCTCCAGGGACCAGGCCAGCAGAGGTGGACGTCCTC...CCCAAGCCAGAGAACCATTAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS-3UTR GCA 90 bp CCCAGTCTCTCATCAGTGACAGTACGTCGCAGCTGGGACGTCAGTGTTGCGTCGAGCAAACGTCTGTCCTaGGGGAGATCCCTTCAGGTC +
Preference number: 4 (lower is better)
Translates to: PSLSSVTVRRSWDVSVASSKRLS*GRSLQV
Trigger: GACCTGAAGGGATCTCCCGCAGGACAGACGTTTGCT...CGACGCAACACTGACGTCCCAGCTGCGACGTACTGTCACTGATGAGAGACTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS-3UTR GCA 90 bp TACGTCGCAGCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCAGCTTCCTCCAGAGCTaGCAGGTCCTCAGAATGACC +
Preference number: 4 (lower is better)
Translates to: YVAAGTSVLRRRIQNEGPSFLQS*QVLRMT
Trigger: GGTCATTCTGAGGACCTGGCAGCTCTGGAGGAAGCT...GGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGCTGCGACGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS-3UTR CCA 90 bp GCTCGTCTGCTAACTGTAACGTGCAGAACCAGGGCGGGAGGGACTTCTACAATCTTCTGGGGCGATTTCTaGGCCTTGCTGGGCGTGGTC +
Preference number: 4 (lower is better)
Translates to: ARLLTVTCRTRAGGTSTIFWGDF*ALLGVV
Trigger: GACCACGCCCAGCAAGGCCCAGAAATCGCCCCAGAA...GATTGTAGAAGTCCCTCCCGCCCTGGTTCTGCACGTTACAGTTAGCAGACGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp AACGTGCAGAACCAGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCAGGTCAAACAGCACCTaGCCCCGGCCATGTTTCTCC +
Preference number: 4 (lower is better)
Translates to: NVQNQGGRDFYNHRGLACRSNST*PRPCFS
Trigger: GGAGAAACATGGCCGGGGCCAGGTGCTGTTTGACCT...GCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCTGGTTCTGCACGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp GGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTGAGCAAGGGATTATATCCAGCTCCCGGGTCTaGTTAGGGGCGAAGCGGAGC +
Preference number: 4 (lower is better)
Translates to: GLACVSYLAGERGEQGIISSSRV*LGAKRS
Trigger: GCTCCGCTTCGCCCCTAACCAGACCCGGGAGCTGGA...TATAATCCCTTGCTCACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp TACGTCGCAGCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTGCCCTCAGAGTCCTTaGCATGGTGCAGGTCTACTC +
Preference number: 4 (lower is better)
Translates to: YVAAGTSVLRRRIQNEGPCPQSP*HGAGLL
Trigger: GAGTAGACCTGCACCATGCCAAGGACTCTGAGGGCA...GGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGCTGCGACGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp ACAAATGGAATTGCTCGTCTGCTAACTGTAACGTGCAGAACCAGGGCGGGAGGGTCACCAGGAAGCCCTTaGGTGGGGGCTCAGGGGACA +
Preference number: 4 (lower is better)
Translates to: TNGIARLLTVTCRTRAGGSPGSP*VGAQGT
Trigger: TGTCCCCTGAGCCCCCACCCAAGGGCTTCCTGGTGA...CCCTCCCGCCCTGGTTCTGCACGTTACAGTTAGCAGACGAGCAATTCCATTTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp CTGCTCTGCCAGCCCCAGCAGCAGTGCAAGGATGCGGTGTTTCCTGTATATATATGGCGAGTCTGTGCCTaGGTCCTCCCACTGTACCGG +
Preference number: 4 (lower is better)
Translates to: LLCQPQQQCKDAVFPVYIWRVCA*VLPLYR
Trigger: CCGGTACAGTGGGAGGACCCAGGCACAGACTCGCCA...TATATATACAGGAAACACCGCATCCTTGCACTGCTGCTGGGGCTGGCAGAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp GGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTGAGCAAGGGATTATAATGAGGGCGCTGGCCTaGCGAGTCTGTGCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: GLACVSYLAGERGEQGIIMRALA*RVCAWV
Trigger: GACCCAGGCACAGACTCGCCAGGCCAGCGCCCTCAT...TATAATCCCTTGCTCACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp AAATGTAGGTGTTCAGATGTCGGTTGTTGCTGTCAGCCAACTGCTCTGCCAGCCATGAGGGCGCTGGCCTaGCGAGTCTGTGCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: KCRCSDVGCCCQPTALPAMRALA*RVCAWV
Trigger: GACCCAGGCACAGACTCGCCAGGCCAGCGCCCTCAT...GGCTGGCAGAGCAGTTGGCTGACAGCAACAACCGACATCTGAACACCTACATTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp AGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCTCGCTGACCGAGGCTaGGCGGGAGAACTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: RAGGTSTIIVVWLAFLIWLADRG*AGELCS
Trigger: GGAGCAGAGTTCTCCCGCCCAGCCTCGGTCAGCGAG...CCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp AACGTGCAGAACCAGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCTCAGGCCCTGCATCATaGTTCTCGCTGACCGAGGCT +
Preference number: 4 (lower is better)
Translates to: NVQNQGGRDFYNHRGLACSGPAS*FSLTEA
Trigger: AGCCTCGGTCAGCGAGAACCATGATGCAGGGCCTGA...GCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCTGGTTCTGCACGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp CCTATGAGCAACATCACCCGTCAGTCTCAGCTTTGTCCTGGGACAGGGGAGGGCCAGTCTCGATCCCGGTaGATGAGTTTGCTGTTGGGC +
Preference number: 4 (lower is better)
Translates to: PMSNITRQSQLCPGTGEGQSRSR*MSLLLG
Trigger: GCCCAACAGCAAACTCATCCACCGGGATCGAGACTG...GCCCTCCCCTGTCCCAGGACAAAGCTGAGACTGACGGGTGATGTTGCTCATAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp CTGCCAGCCCCAGCAGCAGTGCAAGGATGCGGTGTTTCCTGTATATATATCTATGCCTGTGTCACTCTCTaGGGCCCGGGGACGTGGTGG +
Preference number: 4 (lower is better)
Translates to: LPAPAAVQGCGVSCIYIYACVTL*GPGTWW
Trigger: CCACCACGTCCCCGGGCCCCAGAGAGTGACACAGGC...ATAGATATATATACAGGAAACACCGCATCCTTGCACTGCTGCTGGGGCTGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp CCCTGCCCCAAAGCCAGGTGCAAAATCCACAACAAGGATCCTCCCTCTGAGGTGTCCCTCTCCTGGTCCTaGTCCTCATCGCCTGTGTCA +
Preference number: 4 (lower is better)
Translates to: PCPKARCKIHNKDPPSEVSLSWS*SSSPVS
Trigger: TGACACAGGCGATGAGGACCAGGACCAGGAGAGGGA...CACCTCAGAGGGAGGATCCTTGTTGTGGATTTTGCACCTGGCTTTGGGGCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp CCAGGATGGTCACCCAGAACTCCTAACCGCCCTCAGGGACTTTTTCCACTATGCCCAGACTCATCATCCTaGCTGGGGGCCCCCTTGTTG +
Preference number: 4 (lower is better)
Translates to: PGWSPRTPNRPQGLFPLCPDSSS*LGAPLL
Trigger: CAACAAGGGGGCCCCCAGCCAGGATGATGAGTCTGG...GCATAGTGGAAAAAGTCCCTGAGGGCGGTTAGGAGTTCTGGGTGACCATCCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp GACTTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGTGGGCCTGGGATCATaGCAGCTGCCCCCTTCCCGG +
Preference number: 4 (lower is better)
Translates to: DFYNHRGLACVSYLAGERVGLGS*QLPPSR
Trigger: CCGGGAAGGGGGCAGCTGCCATGATCCCAGGCCCAC...CCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGAAGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp AGGAAATGTAGGTGTTCAGATGTCGGTTGTTGCTGTCAGCCAACTGCTCTGCCAGTGGGCCTGGGATCATaGCAGCTGCCCCCTTCCCGG +
Preference number: 4 (lower is better)
Translates to: RKCRCSDVGCCCQPTALPVGLGS*QLPPSR
Trigger: CCGGGAAGGGGGCAGCTGCCATGATCCCAGGCCCAC...TGGCAGAGCAGTTGGCTGACAGCAACAACCGACATCTGAACACCTACATTTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp GGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTGAGCAAGGGATTATACACCGTCTGTGGGCCTaGGATCATGGCAGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: GLACVSYLAGERGEQGIIHRLWA*DHGSCP
Trigger: GGGGCAGCTGCCATGATCCCAGGCCCACAGACGGTG...TATAATCCCTTGCTCACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp AAATGTAGGTGTTCAGATGTCGGTTGTTGCTGTCAGCCAACTGCTCTGCCAGCCCGTGGCCACCGTCTGTaGGCCTGGGATCATGGCAGC +
Preference number: 4 (lower is better)
Translates to: KCRCSDVGCCCQPTALPARGHRL*AWDHGS
Trigger: GCTGCCATGATCCCAGGCCCACAGACGGTGGCCACG...GGCTGGCAGAGCAGTTGGCTGACAGCAACAACCGACATCTGAACACCTACATTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp CAGAACCAGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCGTTTCTGAGAACGGATTTCCGTaGCCACCGTCTGTGGGCCTG +
Preference number: 4 (lower is better)
Translates to: QNQGGRDFYNHRGLACVSENGFP*PPSVGL
Trigger: CAGGCCCACAGACGGTGGCCACGGAAATCCGTTCTC...AGAAACGCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCTGGTTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp TTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGCAGCTGGGACGTCAGTGTGAGAACGGATTTCCGTaGCCACCGTCTGTGGGCCTG +
Preference number: 4 (lower is better)
Translates to: FPSQSLISDSTSQLGRQCENGFP*PPSVGL
Trigger: CAGGCCCACAGACGGTGGCCACGGAAATCCGTTCTC...ACACTGACGTCCCAGCTGCGACGTACTGTCACTGATGAGAGACTGGGAAGGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp GGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTGAGCAAGGGATTATACAGGGGGAGTTGGAGTaGACCCACCGGCCTGCACCA +
Preference number: 4 (lower is better)
Translates to: GLACVSYLAGERGEQGIIQGELE*THRPAP
Trigger: TGGTGCAGGCCGGTGGGTCCACTCCAACTCCCCCTG...TATAATCCCTTGCTCACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp CCACCATCTTCTACAATGGCTGAGAGCACCACCTCCCTTTGGATATGGAGTTGGCAGGGGGAGTTGGAGTaGACCCACCGGCCTGCACCA +
Preference number: 4 (lower is better)
Translates to: PPSSTMAESTTSLWIWSWQGELE*THRPAP
Trigger: TGGTGCAGGCCGGTGGGTCCACTCCAACTCCCCCTG...CCAACTCCATATCCAAAGGGAGGTGGTGCTCTCAGCCATTGTAGAAGATGGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp CTCCCCTCCCACCTTCTTCAGCCTGAGAATAGTCCCTGGCACAAGCAGGTAATCGTGGCCCAGAGAGGATaGAGCCACCACTCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: LPSHLLQPENSPWHKQVIVAQRG*SHHSSS
Trigger: AGAGCTGGAGTGGTGGCTCCATCCTCTCTGGGCCAC...GATTACCTGCTTGTGCCAGGGACTATTCTCAGGCTGAAGAAGGTGGGAGGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp AGGTGTATGTCATCACTGACAAGCCAAAGGGACGCATCTAACCTGGGCCGCCTGACATGGCCTCCTGGGTaGAGAGGTGGCACAGAGAGG +
Preference number: 4 (lower is better)
Translates to: RCMSSLTSQRDASNLGRLTWPPG*RGGTER
Trigger: CCTCTCTGTGCCACCTCTCCACCCAGGAGGCCATGT...CAGGCGGCCCAGGTTAGATGCGTCCCTTTGGCTTGTCAGTGATGACATACACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp AAATGTAGGTGTTCAGATGTCGGTTGTTGCTGTCAGCCAACTGCTCTGCCAGCCCTTCCGGGAGCTGTCTaGCTCGCGGTCCTGGTGTCC +
Preference number: 4 (lower is better)
Translates to: KCRCSDVGCCCQPTALPALPGAV*LAVLVS
Trigger: GGACACCAGGACCGCGAGCCAGACAGCTCCCGGAAG...GGCTGGCAGAGCAGTTGGCTGACAGCAACAACCGACATCTGAACACCTACATTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
CDS-3UTR CCA 90 bp AACCAGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATCTTCCGGGAGCTGTCTaGCTCGCGGTCCTGGTGTCC +
Preference number: 4 (lower is better)
Translates to: NQGGRDFYNHRGLACVSYLPGAV*LAVLVS
Trigger: GGACACCAGGACCGCGAGCCAGACAGCTCCCGGAAG...ATAAGAAACGCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCTGGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
CDS-3UTR CCA 90 bp AACCAGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATCCTGGGGGCTGGAGTTaGGCGAAGCCCAGGTCTGAG +
Preference number: 4 (lower is better)
Translates to: NQGGRDFYNHRGLACVSYPGGWS*AKPRSE
Trigger: CTCAGACCTGGGCTTCGCCCAACTCCAGCCCCCAGG...ATAAGAAACGCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCTGGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS-3UTR CCA 90 bp GCTCGTCTGCTAACTGTAACGTGCAGAACCAGGGCGGGAGGGACTTCTACAATCTCCCTTGTCGGAGGCTaGAGAGAGGACGTCCACCTC +
Preference number: 4 (lower is better)
Translates to: ARLLTVTCRTRAGGTSTISLVGG*REDVHL
Trigger: GAGGTGGACGTCCTCTCTCCAGCCTCCGACAAGGGA...GATTGTAGAAGTCCCTCCCGCCCTGGTTCTGCACGTTACAGTTAGCAGACGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS-3UTR CCA 90 bp CAGAACCAGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCGTTTCTGGCTCCCCTGACCCATaGGAGGTTGGGCTTGGAGAA +
Preference number: 4 (lower is better)
Translates to: QNQGGRDFYNHRGLACVSGSPDP*EVGLGE
Trigger: TTCTCCAAGCCCAACCTCCCATGGGTCAGGGGAGCC...AGAAACGCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCTGGTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS-3UTR TCA 90 bp TCGCAGCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTCCGGATCTGCTTCTTaGTCTCCTTGGAGGGGTCCA +
Preference number: 4 (lower is better)
Translates to: SQLGRQCCVGESRMKAPSSGSAS*SPWRGP
Trigger: TGGACCCCTCCAAGGAGATCAAGAAGCAGATCCGGA...AGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGCTGCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp GAGGCGGGAGAGAGGAAGGTAGGTTTTGCAGCCCAGTGTCAAGATCCAGAAAGTCCAGTAGGGCATGCGTaGCAAAGGAGCATGGCAGCC +
Preference number: 4 (lower is better)
Translates to: EAGERKVGFAAQCQDPESPVGHA*QRSMAA
Trigger: GGCTGCCATGCTCCTTTGTCACGCATGCCCTACTGG...ACTTTCTGGATCTTGACACTGGGCTGCAAAACCTACCTTCCTCTCTCCCGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp AAGACTGAAAACCAAGGCAAGCCCCGTAGGGAGATAAGGACTAAGCCAGGGACCGCCGGTCCCGGTAGATaGGCAGGCCATTGGCACAAA +
Preference number: 4 (lower is better)
Translates to: KTENQGKPRREIRTKPGTAGPGR*AGHWHK
Trigger: TTTGTGCCAATGGCCTGCTCATCTACCGGGACCGGC...GGTCCCTGGCTTAGTCCTTATCTCCCTACGGGGCTTGCCTTGGTTTTCAGTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp GAAGGCCCCTTCTTAATGGTTCTCTGGCTTGGGTTGGACCAGAAATGCCAGGATGCCAGGCAAAGCGGTTaGTTCTCAGCCGGTCCCGGT +
Preference number: 4 (lower is better)
Translates to: EGPFLMVLWLGLDQKCQDARQSG*FSAGPG
Trigger: ACCGGGACCGGCTGAGAATCAACCGCTTTGCCTGGC...ATCCTGGCATTTCTGGTCCAACCCAAGCCAGAGAACCATTAAGAAGGGGCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp CCAGGATGGTCACCCAGAACTCCTAACCGCCCTCAGGGACTTTTTCCACTATGCCCACAGTCTCTTGGCTaGCCGGTGGTTTGGGAGCTT +
Preference number: 4 (lower is better)
Translates to: PGWSPRTPNRPQGLFPLCPQSLG*PVVWEL
Trigger: AAGCTCCCAAACCACCGGTCAGCCAAGAGACTGTGG...GCATAGTGGAAAAAGTCCCTGAGGGCGGTTAGGAGTTCTGGGTGACCATCCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp AAATGTAGGTGTTCAGATGTCGGTTGTTGCTGTCAGCCAACTGCTCTGCCAGCCCATCATGGTTCTCGCTaGCCGAGGCTGGGCGGGAGA +
Preference number: 4 (lower is better)
Translates to: KCRCSDVGCCCQPTALPAHHGSR*PRLGGR
Trigger: TCTCCCGCCCAGCCTCGGTCAGCGAGAACCATGATG...GGCTGGCAGAGCAGTTGGCTGACAGCAACAACCGACATCTGAACACCTACATTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp CAGAACCAGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCGTTTCTCTCGATCCCGGTGGATaGGTTTGCTGTTGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: QNQGGRDFYNHRGLACVSLDPGG*VCCWAP
Trigger: AGGAGCCCAACAGCAAACTCATCCACCGGGATCGAG...AGAAACGCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCTGGTTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp CTCCCCTCCCACCTTCTTCAGCCTGAGAATAGTCCCTGGCACAAGCAGGTAATCCTCGATCCCGGTGGATaGGTTTGCTGTTGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: LPSHLLQPENSPWHKQVILDPGG*VCCWAP
Trigger: AGGAGCCCAACAGCAAACTCATCCACCGGGATCGAG...GATTACCTGCTTGTGCCAGGGACTATTCTCAGGCTGAAGAAGGTGGGAGGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp GGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTGAGCAAGGGATTATAGGTGGTGGTGGAGGTTaGGAGGGTTTCCGCAGTGGC +
Preference number: 4 (lower is better)
Translates to: GLACVSYLAGERGEQGIIGGGGG*EGFRSG
Trigger: GCCACTGCGGAAACCCTCTCAACCTCCACCACCACC...TATAATCCCTTGCTCACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp AGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGGGTGGTGGTGGAGGTTaGGAGGGTTTCCGCAGTGGC +
Preference number: 4 (lower is better)
Translates to: RAGGTSTIIVVWLAFLIWGGGGG*EGFRSG
Trigger: GCCACTGCGGAAACCCTCTCAACCTCCACCACCACC...CCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp ACAAATGGAATTGCTCGTCTGCTAACTGTAACGTGCAGAACCAGGGCGGGAGGGGAACTCCCTCCCCACTaGGGCACTCCCATCAACCTG +
Preference number: 4 (lower is better)
Translates to: TNGIARLLTVTCRTRAGGELPPH*GTPINL
Trigger: CAGGTTGATGGGAGTGCCTCAGTGGGGAGGGAGTTC...CCCTCCCGCCCTGGTTCTGCACGTTACAGTTAGCAGACGAGCAATTCCATTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp TCATCAGTGACAGTACGTCGCAGCTGGGACGTCAGTGTTGCGTCGGAGAATCCAAGGGAGTGGTTGCTATaGACTCCCTCCCCACTGAGG +
Preference number: 4 (lower is better)
Translates to: SSVTVRRSWDVSVASENPREWLL*TPSPLR
Trigger: CCTCAGTGGGGAGGGAGTTCATAGCAACCACTCCCT...TGGATTCTCCGACGCAACACTGACGTCCCAGCTGCGACGTACTGTCACTGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp TCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTGCGTCAGCCCCTACTGTaGGCCAACCCACACCCAGAG +
Preference number: 4 (lower is better)
Translates to: STIIVVWLAFLIWRGKGVRQPLL*ANPHPE
Trigger: CTCTGGGTGTGGGTTGGCTCACAGTAGGGGCTGACG...CACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp TACACTGAACCCGTCAGCCCCTACTGTGAGCCAACCCACACCCAGAGTCCAGGTAGGGAGAAGGTGTCTTaGACTGGCATTTTGGGGACG +
Preference number: 4 (lower is better)
Translates to: YTEPVSPYCEPTHTQSPGREKVS*TGILGT
Trigger: CGTCCCCAAAATGCCAGTTCAAGACACCTTCTCCCT...ACCTGGACTCTGGGTGTGGGTTGGCTCACAGTAGGGGCTGACGGGTTCAGTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp CCGCCCTCAGGGACTTTTTCCACTATGCTACATGGCCTCCTGGGTGGAGAGGTGGTGATGGGAGCTTCTTaGAGGGTTCCTGTGGTCTTG +
Preference number: 4 (lower is better)
Translates to: PPSGTFSTMLHGLLGGEVVMGAS*RVPVVL
Trigger: CAAGACCACAGGAACCCTTCAAGAAGCTCCCATCAC...CACCTCTCCACCCAGGAGGCCATGTAGCATAGTGGAAAAAGTCCCTGAGGGCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp CTGCTCTGCCAGCCCCAGCAGCAGTGCAAGGATGCGGTGTTTCCTGTATATATAGCATCCGCGGGATGGTaGTTTCCCCAAACCCTGGTG +
Preference number: 4 (lower is better)
Translates to: LLCQPQQQCKDAVFPVYIASAGW*FPQTLV
Trigger: CACCAGGGTTTGGGGAAATCACCATCCCGCGGATGC...TATATATACAGGAAACACCGCATCCTTGCACTGCTGCTGGGGCTGGCAGAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp CTGCCAGCCCCAGCAGCAGTGCAAGGATGCGGTGTTTCCTGTATATATATCTATGTCTGGCCCTCCGGCTaGCCATCTGACATGCAGCGG +
Preference number: 4 (lower is better)
Translates to: LPAPAAVQGCGVSCIYIYVWPSG*PSDMQR
Trigger: CCGCTGCATGTCAGATGGTCAGCCGGAGGGCCAGAC...ATAGATATATATACAGGAAACACCGCATCCTTGCACTGCTGCTGGGGCTGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS-3UTR TCA 90 bp TCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTGGGTCTCCCACAAGTGTaGGGCTCCTCCAGCCCCTTC +
Preference number: 4 (lower is better)
Translates to: STIIVVWLAFLIWRGKGVGLPQV*GSSSPF
Trigger: GAAGGGGCTGGAGGAGCCTCACACTTGTGGGAGACC...CACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS-3UTR TCA 90 bp TCGTCTGCTAACTGTAACGTGCAGAACCAGGGCGGGAGGGACTTCTACAATCATTGGGCTTTCTGCTGGTaGTGGGAGGAGGCCTGCGCT +
Preference number: 4 (lower is better)
Translates to: SSANCNVQNQGGRDFYNHWAFCW*WEEACA
Trigger: AGCGCAGGCCTCCTCCCATCACCAGCAGAAAGCCCA...ATGATTGTAGAAGTCCCTCCCGCCCTGGTTCTGCACGTTACAGTTAGCAGACGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS-3UTR GCA 90 bp AATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTGAGCAAGCGATTTCTGGGCCTTaGTGGGCGTGGTCCTCTCCG +
Preference number: 4 (lower is better)
Translates to: NHRGLACVSYLAGERGEQAISGP*WAWSSP
Trigger: CGGAGAGGACCACGCCCAGCAAGGCCCAGAAATCGC...TTGCTCACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp AAATGTAGGTGTTCAGATGTCGGTTGTTGCTGTCAGCCAACTGCTCTGCCAGCCGCGATTTCTGGGCCTTaGTGGGCGTGGTCCTCTCCG +
Preference number: 4 (lower is better)
Translates to: KCRCSDVGCCCQPTALPAAISGP*WAWSSP
Trigger: CGGAGAGGACCACGCCCAGCAAGGCCCAGAAATCGC...GGCTGGCAGAGCAGTTGGCTGACAGCAACAACCGACATCTGAACACCTACATTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp TACGTCGCAGCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCGGGCTACTCCGGATCTaGTTCTTGATCTCCTTGGAG +
Preference number: 4 (lower is better)
Translates to: YVAAGTSVLRRRIQNEGPGLLRI*FLISLE
Trigger: CTCCAAGGAGATCAAGAAGCAGATCCGGAGTAGCCC...GGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGCTGCGACGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp AATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTGAGCAAGCCCGTGATGATGTCTaGCCGCAGCTGCAGGCACAG +
Preference number: 4 (lower is better)
Translates to: NHRGLACVSYLAGERGEQARDDV*PQLQAQ
Trigger: CTGTGCCTGCAGCTGCGGGCAGACATCATCACGGGC...TTGCTCACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp AACCAGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATGCCCGTGATGATGTCTaGCCGCAGCTGCAGGCACAG +
Preference number: 4 (lower is better)
Translates to: NQGGRDFYNHRGLACVSYARDDV*PQLQAQ
Trigger: CTGTGCCTGCAGCTGCGGGCAGACATCATCACGGGC...ATAAGAAACGCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCTGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp CCAGGATGGTCACCCAGAACTCCTAACCGCCCTCAGGGACTTTTTCCACTATGCGAGCCCAGTAGGGCATaGGTGACAAAGGAGCATGGC +
Preference number: 4 (lower is better)
Translates to: PGWSPRTPNRPQGLFPLCEPSRA*VTKEHG
Trigger: GCCATGCTCCTTTGTCACGCATGCCCTACTGGGCTC...GCATAGTGGAAAAAGTCCCTGAGGGCGGTTAGGAGTTCTGGGTGACCATCCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp TCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTGGGCCTGGCGAGTCTGTaGCTGGGTCCTCCCACTGTA +
Preference number: 4 (lower is better)
Translates to: STIIVVWLAFLIWRGKGVGLASL*LGPPTV
Trigger: TACAGTGGGAGGACCCAGGCACAGACTCGCCAGGCC...CACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp GAAGGCCCCTTCTTAATGGTTCTCTGGCTTGGGTTGGACCAGAAATGCCAGGATGGCCTGGCGAGTCTGTaGCTGGGTCCTCCCACTGTA +
Preference number: 4 (lower is better)
Translates to: EGPFLMVLWLGLDQKCQDGLASL*LGPPTV
Trigger: TACAGTGGGAGGACCCAGGCACAGACTCGCCAGGCC...ATCCTGGCATTTCTGGTCCAACCCAAGCCAGAGAACCATTAAGAAGGGGCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp ACAAATGGAATTGCTCGTCTGCTAACTGTAACGTGCAGAACCAGGGCGGGAGGGTGGGCGGGAGAACTCTaGTCCATCAAGGCTGCGGGA +
Preference number: 4 (lower is better)
Translates to: TNGIARLLTVTCRTRAGGWAGEL*SIKAAG
Trigger: TCCCGCAGCCTTGATGGAGCAGAGTTCTCCCGCCCA...CCCTCCCGCCCTGGTTCTGCACGTTACAGTTAGCAGACGAGCAATTCCATTTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp GAGGCGGGAGAGAGGAAGGTAGGTTTTGCAGCCCAGTGTCAAGATCCAGAAAGTTGGGCGGGAGAACTCTaGTCCATCAAGGCTGCGGGA +
Preference number: 4 (lower is better)
Translates to: EAGERKVGFAAQCQDPESWAGEL*SIKAAG
Trigger: TCCCGCAGCCTTGATGGAGCAGAGTTCTCCCGCCCA...ACTTTCTGGATCTTGACACTGGGCTGCAAAACCTACCTTCCTCTCTCCCGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp GCAGCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTAGTCACCGTCAGGCCCTaGATCATGGTTCTCGCTGAC +
Preference number: 4 (lower is better)
Translates to: AAGTSVLRRRIQNEGPFLVTVRP*IMVLAD
Trigger: GTCAGCGAGAACCATGATGCAGGGCCTGACGGTGAC...TAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp AACCAGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTCAGCCTCTGACCGTTaGCCCCCAGACTCGCCATCC +
Preference number: 4 (lower is better)
Translates to: NQGGRDFYNHRGLACVSYSASDR*PPDSPS
Trigger: GGATGGCGAGTCTGGGGGGCAACGGTCAGAGGCTGA...ATAAGAAACGCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCTGGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp CCACCATCTTCTACAATGGCTGAGAGCACCACCTCCCTTTGGATATGGAGTTGGGCGGAGACTCTGGTCTaGAGTACGGCCTCCGGCTCA +
Preference number: 4 (lower is better)
Translates to: PPSSTMAESTTSLWIWSWAETLV*STASGS
Trigger: TGAGCCGGAGGCCGTACTGCAGACCAGAGTCTCCGC...CCAACTCCATATCCAAAGGGAGGTGGTGCTCTCAGCCATTGTAGAAGATGGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp GCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTAATGTGGGATCATGGCAGCTaGCCCCTTCCCGGACTTGAG +
Preference number: 4 (lower is better)
Translates to: AGTSVLRRRIQNEGPFLMWDHGS*PLPGLE
Trigger: CTCAAGTCCGGGAAGGGGGCAGCTGCCATGATCCCA...CATTAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp TTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGCAGCTGGGACGTCAGTGTCAGCCCCAGCAGCAGTaGAAGGATGCGGTGTTTCCT +
Preference number: 4 (lower is better)
Translates to: FPSQSLISDSTSQLGRQCQPQQQ*KDAVFP
Trigger: AGGAAACACCGCATCCTTGCACTGCTGCTGGGGCTG...ACACTGACGTCCCAGCTGCGACGTACTGTCACTGATGAGAGACTGGGAAGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp TCGTCTGCTAACTGTAACGTGCAGAACCAGGGCGGGAGGGACTTCTACAATCATGTCAGCCAACTGCTCTaGCAGCCCCAGCAGCAGTGC +
Preference number: 4 (lower is better)
Translates to: SSANCNVQNQGGRDFYNHVSQLL*QPQQQC
Trigger: GCACTGCTGCTGGGGCTGGCAGAGCAGTTGGCTGAC...ATGATTGTAGAAGTCCCTCCCGCCCTGGTTCTGCACGTTACAGTTAGCAGACGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp TTAATGGTTCTCTGGCTTGGGTTGGACCAGAAATGCCAGGATCTCTTCACAGAGTGGGTGGCCGTGGCCTaGAGGGGTCACAGGGGTGGT +
Preference number: 4 (lower is better)
Translates to: LMVLWLGLDQKCQDLFTEWVAVA*RGHRGG
Trigger: ACCACCCCTGTGACCCCTGCAGGCCACGGCCACCCA...CTCTGTGAAGAGATCCTGGCATTTCTGGTCCAACCCAAGCCAGAGAACCATTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000636016.2
CDS-3UTR GCA 90 bp AAGACTGAAAACCAAGGCAAGCCCCGTAGGGAGATAAGGACTAAGCCAGGGACCGCAGGCCGCGTGTCCTaGTGGGATGGATGCTTCTCA +
Preference number: 4 (lower is better)
Translates to: KTENQGKPRREIRTKPGTAGRVS*WDGCFS
Trigger: TGAGAAGCATCCATCCCAGCAGGACACGCGGCCTGC...GGTCCCTGGCTTAGTCCTTATCTCCCTACGGGGCTTGCCTTGGTTTTCAGTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000636016.2
CDS-3UTR GCA 90 bp GCTCGTCTGCTAACTGTAACGTGCAGAACCAGGGCGGGAGGGACTTCTACAATCCTCGGCGTGGTTTCCTaGTCCGGCTTTAGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: ARLLTVTCRTRAGGTSTILGVVS*SGFSSL
Trigger: CAAGGAGCTAAAGCCGGAGCAGGAAACCACGCCGAG...GATTGTAGAAGTCCCTCCCGCCCTGGTTCTGCACGTTACAGTTAGCAGACGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000636016.2
CDS-3UTR GCA 90 bp AACGTGCAGAACCAGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCGATGGAGGGAGTGGTTaGTATGAACTCCCTCCCCAC +
Preference number: 4 (lower is better)
Translates to: NVQNQGGRDFYNHRGLACDGGSG*YELPPH
Trigger: GTGGGGAGGGAGTTCATAGCAACCACTCCCTCCATC...GCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCTGGTTCTGCACGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp TACGTCGCAGCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTGTGGCAGAGAGCAATaGCAAGCTTGTGATGGGAGC +
Preference number: 4 (lower is better)
Translates to: YVAAGTSVLRRRIQNEGPCGREQ*QACDGS
Trigger: GCTCCCATCACAAGCTTGGCATTGCTCTCTGCCACA...GGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGCTGCGACGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp GAGGCGGGAGAGAGGAAGGTAGGTTTTGCAGCCCAGTGTCAAGATCCAGAAAGTGGCATCCCTGGGCTATaGCCCGATAGGTTGGCGAGA +
Preference number: 4 (lower is better)
Translates to: EAGERKVGFAAQCQDPESGIPGL*PDRLAR
Trigger: TCTCGCCAACCTATCGGGGCATAGCCCAGGGATGCC...ACTTTCTGGATCTTGACACTGGGCTGCAAAACCTACCTTCCTCTCTCCCGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp ACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTAATGGTTCTCGTGGACCCACCGGCCTaGACCAGGGGGAATGCCACT +
Preference number: 4 (lower is better)
Translates to: TSVLRRRIQNEGPFLMVLVDPPA*TRGNAT
Trigger: AGTGGCATTCCCCCTGGTGCAGGCCGGTGGGTCCAC...GAGAACCATTAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp GCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTAATGGAGAGCGTACTCCGCTaGTGCTCTGCTTGTCCCACG +
Preference number: 4 (lower is better)
Translates to: AGTSVLRRRIQNEGPFLMESVLR*CSACPT
Trigger: CGTGGGACAAGCAGAGCAGCAGCGGAGTACGCTCTC...CATTAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS-3UTR GCA 90 bp CTCCCCTCCCACCTTCTTCAGCCTGAGAATAGTCCCTGGCACAAGCAGGTAATCTTCCAAGCCTGCGGCTaGTCCAGGCTCAGGTACCAA +
Preference number: 4 (lower is better)
Translates to: LPSHLLQPENSPWHKQVIFQACG*SRLRYQ
Trigger: TTGGTACCTGAGCCTGGAGCAGCCGCAGGCTTGGAA...GATTACCTGCTTGTGCCAGGGACTATTCTCAGGCTGAAGAAGGTGGGAGGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS-3UTR GCA 90 bp CAGAACCAGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCGTTTCTGTTCTTGGGGGTCCCTaGCCCTTCCTTTGGGGAAGT +
Preference number: 4 (lower is better)
Translates to: QNQGGRDFYNHRGLACVSVLGGP*PFLWGS
Trigger: ACTTCCCCAAAGGAAGGGGCAGGGACCCCCAAGAAC...AGAAACGCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCTGGTTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS-3UTR CCA 90 bp TTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGCAGCTGGGACGTCAGTGTCGTGACAAAGGAGCATaGCAGCCGGCCCGTGATGAT +
Preference number: 4 (lower is better)
Translates to: FPSQSLISDSTSQLGRQCRDKGA*QPARDD
Trigger: ATCATCACGGGCCGGCTGCCATGCTCCTTTGTCACG...ACACTGACGTCCCAGCTGCGACGTACTGTCACTGATGAGAGACTGGGAAGGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp CAGAACCAGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCGTTTCTCGTGACAAAGGAGCATaGCAGCCGGCCCGTGATGAT +
Preference number: 4 (lower is better)
Translates to: QNQGGRDFYNHRGLACVSRDKGA*QPARDD
Trigger: ATCATCACGGGCCGGCTGCCATGCTCCTTTGTCACG...AGAAACGCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCTGGTTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp CCACCATCTTCTACAATGGCTGAGAGCACCACCTCCCTTTGGATATGGAGTTGGTGGCGAGTCTGTGCCTaGGTCCTCCCACTGTACCGG +
Preference number: 4 (lower is better)
Translates to: PPSSTMAESTTSLWIWSWWRVCA*VLPLYR
Trigger: CCGGTACAGTGGGAGGACCCAGGCACAGACTCGCCA...CCAACTCCATATCCAAAGGGAGGTGGTGCTCTCAGCCATTGTAGAAGATGGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp GGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTGAGCAAGGGATTATATGGCGAGTCTGTGCCTaGGTCCTCCCACTGTACCGG +
Preference number: 4 (lower is better)
Translates to: GLACVSYLAGERGEQGIIWRVCA*VLPLYR
Trigger: CCGGTACAGTGGGAGGACCCAGGCACAGACTCGCCA...TATAATCCCTTGCTCACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp TTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTATGAGGGCGCTGGCCTaGCGAGTCTGTGCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: FYNHRGLACVSYLAGERGMRALA*RVCAWV
Trigger: GACCCAGGCACAGACTCGCCAGGCCAGCGCCCTCAT...ACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp CTGCCAGCCCCAGCAGCAGTGCAAGGATGCGGTGTTTCCTGTATATATATCTATCTCGCTGACCGAGGCTaGGCGGGAGAACTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: LPAPAAVQGCGVSCIYIYLADRG*AGELCS
Trigger: GGAGCAGAGTTCTCCCGCCCAGCCTCGGTCAGCGAG...ATAGATATATATACAGGAAACACCGCATCCTTGCACTGCTGCTGGGGCTGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp TTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGCAGCTGGGACGTCAGTGTTCAGGCCCTGCATCATaGTTCTCGCTGACCGAGGCT +
Preference number: 4 (lower is better)
Translates to: FPSQSLISDSTSQLGRQCSGPAS*FSLTEA
Trigger: AGCCTCGGTCAGCGAGAACCATGATGCAGGGCCTGA...ACACTGACGTCCCAGCTGCGACGTACTGTCACTGATGAGAGACTGGGAAGGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp ACAAATGGAATTGCTCGTCTGCTAACTGTAACGTGCAGAACCAGGGCGGGAGGGCCAGACTCATCATCCTaGCTGGGGGCCCCCTTGTTG +
Preference number: 4 (lower is better)
Translates to: TNGIARLLTVTCRTRAGGPDSSS*LGAPLL
Trigger: CAACAAGGGGGCCCCCAGCCAGGATGATGAGTCTGG...CCCTCCCGCCCTGGTTCTGCACGTTACAGTTAGCAGACGAGCAATTCCATTTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp TCATCAGTGACAGTACGTCGCAGCTGGGACGTCAGTGTTGCGTCGGAGAATCCATTCACGGGCTCAAACTaGGGCATATCCGGGGTGGAG +
Preference number: 4 (lower is better)
Translates to: SSVTVRRSWDVSVASENPFTGSN*GISGVE
Trigger: CTCCACCCCGGATATGCCCCAGTTTGAGCCCGTGAA...TGGATTCTCCGACGCAACACTGACGTCCCAGCTGCGACGTACTGTCACTGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp CTGCCAGCCCCAGCAGCAGTGCAAGGATGCGGTGTTTCCTGTATATATATCTATCACCGTCTGTGGGCCTaGGATCATGGCAGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: LPAPAAVQGCGVSCIYIYHRLWA*DHGSCP
Trigger: GGGGCAGCTGCCATGATCCCAGGCCCACAGACGGTG...ATAGATATATATACAGGAAACACCGCATCCTTGCACTGCTGCTGGGGCTGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp CTGCTCTGCCAGCCCCAGCAGCAGTGCAAGGATGCGGTGTTTCCTGTATATATAGAGAACGGATTTCCGTaGCCACCGTCTGTGGGCCTG +
Preference number: 4 (lower is better)
Translates to: LLCQPQQQCKDAVFPVYIENGFP*PPSVGL
Trigger: CAGGCCCACAGACGGTGGCCACGGAAATCCGTTCTC...TATATATACAGGAAACACCGCATCCTTGCACTGCTGCTGGGGCTGGCAGAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp GCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTAATGGAGAACGGATTTCCGTaGCCACCGTCTGTGGGCCTG +
Preference number: 4 (lower is better)
Translates to: AGTSVLRRRIQNEGPFLMENGFP*PPSVGL
Trigger: CAGGCCCACAGACGGTGGCCACGGAAATCCGTTCTC...CATTAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp CCCAGTCTCTCATCAGTGACAGTACGTCGCAGCTGGGACGTCAGTGTTGCGTCGAGGTCAGGATTCCTGTaGCTTCTTGTCCCTCTCCTC +
Preference number: 4 (lower is better)
Translates to: PSLSSVTVRRSWDVSVASRSGFL*LLVPLL
Trigger: GAGGAGAGGGACAAGAAGCCACAGGAATCCTGACCT...CGACGCAACACTGACGTCCCAGCTGCGACGTACTGTCACTGATGAGAGACTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp TACGTCGCAGCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCAGGTCAGGATTCCTGTaGCTTCTTGTCCCTCTCCTC +
Preference number: 4 (lower is better)
Translates to: YVAAGTSVLRRRIQNEGPRSGFL*LLVPLL
Trigger: GAGGAGAGGGACAAGAAGCCACAGGAATCCTGACCT...GGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGCTGCGACGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp CCGCCCTCAGGGACTTTTTCCACTATGCTACATGGCCTCCTGGGTGGAGAGGTGGACTGTTCTCCATGGTaGTCGATATGGTCTCCGTGG +
Preference number: 4 (lower is better)
Translates to: PPSGTFSTMLHGLLGGEVDCSPW*SIWSPW
Trigger: CCACGGAGACCATATCGACCACCATGGAGAACAGTC...CACCTCTCCACCCAGGAGGCCATGTAGCATAGTGGAAAAAGTCCCTGAGGGCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000636016.2
CDS-3UTR CCA 90 bp CCTATGAGCAACATCACCCGTCAGTCTCAGCTTTGTCCTGGGACAGGGGAGGGCCCAGGTCTCCTTAGCTaGGCCAGTTCAGTGAGATCT +
Preference number: 4 (lower is better)
Translates to: PMSNITRQSQLCPGTGEGPGLLS*ASSVRS
Trigger: AGATCTCACTGAACTGGCCCAGCTAAGGAGACCTGG...GCCCTCCCCTGTCCCAGGACAAAGCTGAGACTGACGGGTGATGTTGCTCATAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp CAGAACCAGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCGTTTCTGAGGAAGCCCACGTGTaGCAGAGAGCAATGCCAAGC +
Preference number: 4 (lower is better)
Translates to: QNQGGRDFYNHRGLACVSEEAHV*QRAMPS
Trigger: GCTTGGCATTGCTCTCTGCCACACGTGGGCTTCCTC...AGAAACGCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCTGGTTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp CCTATGAGCAACATCACCCGTCAGTCTCAGCTTTGTCCTGGGACAGGGGAGGGCATAGGTTGGCGAGAGTaGGGAGATGCTCTCAGATGG +
Preference number: 4 (lower is better)
Translates to: PMSNITRQSQLCPGTGEGIGWRE*GDALRW
Trigger: CCATCTGAGAGCATCTCCCCACTCTCGCCAACCTAT...GCCCTCCCCTGTCCCAGGACAAAGCTGAGACTGACGGGTGATGTTGCTCATAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp AGGAAATGTAGGTGTTCAGATGTCGGTTGTTGCTGTCAGCCAACTGCTCTGCCACTAACCTGGGCCGCCTaGGGGCATCCCTGGGCTATG +
Preference number: 4 (lower is better)
Translates to: RKCRCSDVGCCCQPTALPLTWAA*GHPWAM
Trigger: CATAGCCCAGGGATGCCCCCAGGCGGCCCAGGTTAG...TGGCAGAGCAGTTGGCTGACAGCAACAACCGACATCTGAACACCTACATTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp TTCAGTGTGCTCAGGACTCCTGGTTCCTGCAAAGATGAGTTCCTAGACCGAAGTCTAACCTGGGCCGCCTaGGGGCATCCCTGGGCTATG +
Preference number: 4 (lower is better)
Translates to: FSVLRTPGSCKDEFLDRSLTWAA*GHPWAM
Trigger: CATAGCCCAGGGATGCCCCCAGGCGGCCCAGGTTAG...ACTTCGGTCTAGGAACTCATCTTTGCAGGAACCAGGAGTCCTGAGCACACTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp AATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTGAGCAAACACTCAGGGGGAGTTaGAGTGGACCCACCGGCCTG +
Preference number: 4 (lower is better)
Translates to: NHRGLACVSYLAGERGEQTLRGS*SGPTGL
Trigger: CAGGCCGGTGGGTCCACTCCAACTCCCCCTGAGTGT...TTGCTCACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp CCACCATCTTCTACAATGGCTGAGAGCACCACCTCCCTTTGGATATGGAGTTGGACACTCAGGGGGAGTTaGAGTGGACCCACCGGCCTG +
Preference number: 4 (lower is better)
Translates to: PPSSTMAESTTSLWIWSWTLRGS*SGPTGL
Trigger: CAGGCCGGTGGGTCCACTCCAACTCCCCCTGAGTGT...CCAACTCCATATCCAAAGGGAGGTGGTGCTCTCAGCCATTGTAGAAGATGGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp CCAGGATGGTCACCCAGAACTCCTAACCGCCCTCAGGGACTTTTTCCACTATGCGTTCCTAGACCGAAGTaGCCCAGAGAGGATGGAGCC +
Preference number: 4 (lower is better)
Translates to: PGWSPRTPNRPQGLFPLCVPRPK*PREDGA
Trigger: GGCTCCATCCTCTCTGGGCCACTTCGGTCTAGGAAC...GCATAGTGGAAAAAGTCCCTGAGGGCGGTTAGGAGTTCTGGGTGACCATCCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp TACACTGAACCCGTCAGCCCCTACTGTGAGCCAACCCACACCCAGAGTCCAGGTTTCCCCAAACCCTGGTaGCCCATAAACTCCACAAGC +
Preference number: 4 (lower is better)
Translates to: YTEPVSPYCEPTHTQSPGFPKPW*PINSTS
Trigger: GCTTGTGGAGTTTATGGGCCACCAGGGTTTGGGGAA...ACCTGGACTCTGGGTGTGGGTTGGCTCACAGTAGGGGCTGACGGGTTCAGTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp CAGAACCAGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTGCTACATGGCCTCCTaGGTGGAGAGGTGGCACAGA +
Preference number: 4 (lower is better)
Translates to: QNQGGRDFYNHRGLACVSCYMAS*VERWHR
Trigger: TCTGTGCCACCTCTCCACCCAGGAGGCCATGTAGCA...AGAAACGCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCTGGTTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp AAATGTAGGTGTTCAGATGTCGGTTGTTGCTGTCAGCCAACTGCTCTGCCAGCCCACGGAGCACTGAGGTaGGGGAGCATGGGGACGAGA +
Preference number: 4 (lower is better)
Translates to: KCRCSDVGCCCQPTALPAHGALR*GSMGTR
Trigger: TCTCGTCCCCATGCTCCCCCACCTCAGTGCTCCGTG...GGCTGGCAGAGCAGTTGGCTGACAGCAACAACCGACATCTGAACACCTACATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp TTTCTTTTTCTCATTTCAAAGGAGAGTCATCTGCAGTGGCCCTCAGAAGGACCATCTGGCTCGCGGTCCTaGTGTCCGGCGGCTGCCCCG +
Preference number: 4 (lower is better)
Translates to: FLFLISKESHLQWPSEGPSGSRS*CPAAAP
Trigger: CGGGGCAGCCGCCGGACACCAGGACCGCGAGCCAGA...TGGTCCTTCTGAGGGCCACTGCAGATGACTCTCCTTTGAAATGAGAAAAAGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
CDS-3UTR CCA 90 bp GACTTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGCTTCCGGGAGCTGTCTaGCTCGCGGTCCTGGTGTCC +
Preference number: 4 (lower is better)
Translates to: DFYNHRGLACVSYLAGERLPGAV*LAVLVS
Trigger: GGACACCAGGACCGCGAGCCAGACAGCTCCCGGAAG...CCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGAAGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
CDS-3UTR CCA 90 bp TCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTGCCTCTCGGGCTGCGCTaGCTGTCAGGTGGGGAAACT +
Preference number: 4 (lower is better)
Translates to: STIIVVWLAFLIWRGKGVPLGLR*LSGGET
Trigger: AGTTTCCCCACCTGACAGCCAGCGCAGCCCGAGAGG...CACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS-3UTR CCA 90 bp CTCCCCTCCCACCTTCTTCAGCCTGAGAATAGTCCCTGGCACAAGCAGGTAATCCCCCTCCTTTCTGGGTaGGAACCACTCCCCTCTCTT +
Preference number: 4 (lower is better)
Translates to: LPSHLLQPENSPWHKQVIPLLSG*EPLPSL
Trigger: AAGAGAGGGGAGTGGTTCCCACCCAGAAAGGAGGGG...GATTACCTGCTTGTGCCAGGGACTATTCTCAGGCTGAAGAAGGTGGGAGGGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS-3UTR CCA 90 bp GCTCGTCTGCTAACTGTAACGTGCAGAACCAGGGCGGGAGGGACTTCTACAATCATGACCAGGGGAGGCTaGCAGGGGAATGATCACCTC +
Preference number: 4 (lower is better)
Translates to: ARLLTVTCRTRAGGTSTIMTRGG*QGNDHL
Trigger: GAGGTGATCATTCCCCTGCCAGCCTCCCCTGGTCAT...GATTGTAGAAGTCCCTCCCGCCCTGGTTCTGCACGTTACAGTTAGCAGACGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS-3UTR CCA 90 bp CCAGGATGGTCACCCAGAACTCCTAACCGCCCTCAGGGACTTTTTCCACTATGCTCTAGGGAGCCCTCTTaGTCCCCAGCCTGGAAAGAG +
Preference number: 4 (lower is better)
Translates to: PGWSPRTPNRPQGLFPLCSREPS*SPAWKE
Trigger: CTCTTTCCAGGCTGGGGACCAAGAGGGCTCCCTAGA...GCATAGTGGAAAAAGTCCCTGAGGGCGGTTAGGAGTTCTGGGTGACCATCCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS-3UTR TCA 90 bp GCAGCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTATCCGGATCTGCTTCTTaGTCTCCTTGGAGGGGTCCA +
Preference number: 4 (lower is better)
Translates to: AAGTSVLRRRIQNEGPFLSGSAS*SPWRGP
Trigger: TGGACCCCTCCAAGGAGATCAAGAAGCAGATCCGGA...TAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp GCTCGTCTGCTAACTGTAACGTGCAGAACCAGGGCGGGAGGGACTTCTACAATCTCCGGATCTGCTTCTTaGTCTCCTTGGAGGGGTCCA +
Preference number: 4 (lower is better)
Translates to: ARLLTVTCRTRAGGTSTISGSAS*SPWRGP
Trigger: TGGACCCCTCCAAGGAGATCAAGAAGCAGATCCGGA...GATTGTAGAAGTCCCTCCCGCCCTGGTTCTGCACGTTACAGTTAGCAGACGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp TCATCAGTGACAGTACGTCGCAGCTGGGACGTCAGTGTTGCGTCGGAGAATCCATCCGGATCTGCTTCTTaGTCTCCTTGGAGGGGTCCA +
Preference number: 4 (lower is better)
Translates to: SSVTVRRSWDVSVASENPSGSAS*SPWRGP
Trigger: TGGACCCCTCCAAGGAGATCAAGAAGCAGATCCGGA...TGGATTCTCCGACGCAACACTGACGTCCCAGCTGCGACGTACTGTCACTGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp TTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGCAGCTGGGACGTCAGTGTTCCGGATCTGCTTCTTaGTCTCCTTGGAGGGGTCCA +
Preference number: 4 (lower is better)
Translates to: FPSQSLISDSTSQLGRQCSGSAS*SPWRGP
Trigger: TGGACCCCTCCAAGGAGATCAAGAAGCAGATCCGGA...ACACTGACGTCCCAGCTGCGACGTACTGTCACTGATGAGAGACTGGGAAGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp GAGGCGGGAGAGAGGAAGGTAGGTTTTGCAGCCCAGTGTCAAGATCCAGAAAGTCGAAGCGGAGCTCGCTaGCATAGTTGCCCACATGCT +
Preference number: 4 (lower is better)
Translates to: EAGERKVGFAAQCQDPESRSGAR*HSCPHA
Trigger: AGCATGTGGGCAACTATGTCAGCGAGCTCCGCTTCG...ACTTTCTGGATCTTGACACTGGGCTGCAAAACCTACCTTCCTCTCTCCCGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp TACGTCGCAGCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCCACAAACGCCTAACATaGTGTCGATGCCCTCAGAGT +
Preference number: 4 (lower is better)
Translates to: YVAAGTSVLRRRIQNEGPHKRLT*CRCPQS
Trigger: ACTCTGAGGGCATCGACATCATGTTAGGCGTTTGTG...GGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGCTGCGACGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp GAAGGCCCCTTCTTAATGGTTCTCTGGCTTGGGTTGGACCAGAAATGCCAGGATGCCGGTCCCGGTAGATaGGCAGGCCATTGGCACAAA +
Preference number: 4 (lower is better)
Translates to: EGPFLMVLWLGLDQKCQDAGPGR*AGHWHK
Trigger: TTTGTGCCAATGGCCTGCTCATCTACCGGGACCGGC...ATCCTGGCATTTCTGGTCCAACCCAAGCCAGAGAACCATTAAGAAGGGGCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp ACAAATGGAATTGCTCGTCTGCTAACTGTAACGTGCAGAACCAGGGCGGGAGGGCCACAGTCTCTTGGCTaGCCGGTGGTTTGGGAGCTT +
Preference number: 4 (lower is better)
Translates to: TNGIARLLTVTCRTRAGGPQSLG*PVVWEL
Trigger: AAGCTCCCAAACCACCGGTCAGCCAAGAGACTGTGG...CCCTCCCGCCCTGGTTCTGCACGTTACAGTTAGCAGACGAGCAATTCCATTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp CCCAGTCTCTCATCAGTGACAGTACGTCGCAGCTGGGACGTCAGTGTTGCGTCGAGCCGGAAGAATGTATaGTGCTCGATGCAGACCTTC +
Preference number: 4 (lower is better)
Translates to: PSLSSVTVRRSWDVSVASSRKNV*CSMQTF
Trigger: GAAGGTCTGCATCGAGCATCATACATTCTTCCGGCT...CGACGCAACACTGACGTCCCAGCTGCGACGTACTGTCACTGATGAGAGACTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp CTGCCAGCCCCAGCAGCAGTGCAAGGATGCGGTGTTTCCTGTATATATATCTATCATCATGGTTCTCGCTaGCCGAGGCTGGGCGGGAGA +
Preference number: 4 (lower is better)
Translates to: LPAPAAVQGCGVSCIYIYHHGSR*PRLGGR
Trigger: TCTCCCGCCCAGCCTCGGTCAGCGAGAACCATGATG...ATAGATATATATACAGGAAACACCGCATCCTTGCACTGCTGCTGGGGCTGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp GCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTAATGCTCGATCCCGGTGGATaGGTTTGCTGTTGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: AGTSVLRRRIQNEGPFLMLDPGG*VCCWAP
Trigger: AGGAGCCCAACAGCAAACTCATCCACCGGGATCGAG...CATTAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp AACCAGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATGGGGACGTGGTGGTTTaGCTTTCTCCTCGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: NQGGRDFYNHRGLACVSYGDVVV*LSPRSP
Trigger: AGGGCTCCGAGGAGAAAGTCAAACCACCACGTCCCC...ATAAGAAACGCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCTGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp TTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTTGGGGGCCCCCTTGTTaGGATCCCGGGAGAACAGCA +
Preference number: 4 (lower is better)
Translates to: FYNHRGLACVSYLAGERGWGPPC*DPGRTA
Trigger: TGCTGTTCTCCCGGGATCTCAACAAGGGGGCCCCCA...ACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 6 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp ACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTAATGGTTCTCGGTGGTGGTGGAGGTTaGGAGGGTTTCCGCAGTGGC +
Preference number: 4 (lower is better)
Translates to: TSVLRRRIQNEGPFLMVLGGGGG*EGFRSG
Trigger: GCCACTGCGGAAACCCTCTCAACCTCCACCACCACC...GAGAACCATTAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp AACGTGCAGAACCAGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCCTTTCACAGTTTTGGTaGCATGGGTGGTGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: NVQNQGGRDFYNHRGLACLSQFW*HGWWWR
Trigger: CCTCCACCACCACCCATGTCACCAAAACTGTGAAAG...GCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCTGGTTCTGCACGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp CTGCTCTGCCAGCCCCAGCAGCAGTGCAAGGATGCGGTGTTTCCTGTATATATAGCCAGGGCCTGGTCTTaGTCGACATCTTCATCCCCA +
Preference number: 4 (lower is better)
Translates to: LLCQPQQQCKDAVFPVYIARAWS*STSSSP
Trigger: TGGGGATGAAGATGTCGATCAAGACCAGGCCCTGGC...TATATATACAGGAAACACCGCATCCTTGCACTGCTGCTGGGGCTGGCAGAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp CCCAGTCTCTCATCAGTGACAGTACGTCGCAGCTGGGACGTCAGTGTTGCGTCGATGACAGCAAGACATTaGGAGTTGAGGGTGAGGGGA +
Preference number: 4 (lower is better)
Translates to: PSLSSVTVRRSWDVSVASMTARH*ELRVRG
Trigger: TCCCCTCACCCTCAACTCTCAATGTCTTGCTGTCAT...CGACGCAACACTGACGTCCCAGCTGCGACGTACTGTCACTGATGAGAGACTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp AATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTGAGCAAGAACTCCCTCCCCACTaGGGCACTCCCATCAACCTG +
Preference number: 4 (lower is better)
Translates to: NHRGLACVSYLAGERGEQELPPH*GTPINL
Trigger: CAGGTTGATGGGAGTGCCTCAGTGGGGAGGGAGTTC...TTGCTCACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp AGGTGTATGTCATCACTGACAAGCCAAAGGGACGCATCTAACCTGGGCCGCCTGGCTGGGCCAGTTCAGTaGGATCTAGGAACCTCAGGA +
Preference number: 4 (lower is better)
Translates to: RCMSSLTSQRDASNLGRLAGPVQ*DLGTSG
Trigger: TCCTGAGGTTCCTAGATCTCACTGAACTGGCCCAGC...CAGGCGGCCCAGGTTAGATGCGTCCCTTTGGCTTGTCAGTGATGACATACACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp CCGCCCTCAGGGACTTTTTCCACTATGCTACATGGCCTCCTGGGTGGAGAGGTGACAGTATTACTACACTaGACCCGTCAGCCCCTACTG +
Preference number: 4 (lower is better)
Translates to: PPSGTFSTMLHGLLGGEVTVLLH*TRQPLL
Trigger: CAGTAGGGGCTGACGGGTTCAGTGTAGTAATACTGT...CACCTCTCCACCCAGGAGGCCATGTAGCATAGTGGAAAAAGTCCCTGAGGGCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp GCAGCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTACAGAGCTGGAGCCTATaGGCAACATCACCCGTCAGT +
Preference number: 4 (lower is better)
Translates to: AAGTSVLRRRIQNEGPFLQSWSL*ATSPVS
Trigger: ACTGACGGGTGATGTTGCTCATAGGCTCCAGCTCTG...TAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp GCTCGTCTGCTAACTGTAACGTGCAGAACCAGGGCGGGAGGGACTTCTACAATCAGTTCAGCTGTTGACTaGGAGGGAGGTCTCCAAGCC +
Preference number: 4 (lower is better)
Translates to: ARLLTVTCRTRAGGTSTISSAVD*EGGLQA
Trigger: GGCTTGGAGACCTCCCTCTCAGTCAACAGCTGAACT...GATTGTAGAAGTCCCTCCCGCCCTGGTTCTGCACGTTACAGTTAGCAGACGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp AGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGTGTGGCAGACAAGCCTaGGGAAGCCCACGTGTGGCA +
Preference number: 4 (lower is better)
Translates to: RAGGTSTIIVVWLAFLIWCGRQA*GSPRVA
Trigger: TGCCACACGTGGGCTTCCTCAGGCTTGTCTGCCACA...CCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp TCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTGTGTGGCAGACAAGCCTaGGGAAGCCCACGTGTGGCA +
Preference number: 4 (lower is better)
Translates to: STIIVVWLAFLIWRGKGVCGRQA*GSPRVA
Trigger: TGCCACACGTGGGCTTCCTCAGGCTTGTCTGCCACA...CACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp CCCAGTCTCTCATCAGTGACAGTACGTCGCAGCTGGGACGTCAGTGTTGCGTCGTCAAGGGGCACTTTCTaGGCTCAGAGAAGTAGCTTG +
Preference number: 4 (lower is better)
Translates to: PSLSSVTVRRSWDVSVASSRGTF*AQRSSL
Trigger: CAAGCTACTTCTCTGAGCTCAGAAAGTGCCCCTTGA...CGACGCAACACTGACGTCCCAGCTGCGACGTACTGTCACTGATGAGAGACTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp TACGTCGCAGCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTCAAGGGGCACTTTCTaGGCTCAGAGAAGTAGCTTG +
Preference number: 4 (lower is better)
Translates to: YVAAGTSVLRRRIQNEGPSRGTF*AQRSSL
Trigger: CAAGCTACTTCTCTGAGCTCAGAAAGTGCCCCTTGA...GGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGCTGCGACGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp AAATGTAGGTGTTCAGATGTCGGTTGTTGCTGTCAGCCAACTGCTCTGCCAGCCCAGGGGGAATGCCACTaGTTCTGCTGCCCCGCTGAA +
Preference number: 4 (lower is better)
Translates to: KCRCSDVGCCCQPTALPAQGECH*FCCPAE
Trigger: TTCAGCGGGGCAGCAGAATCAGTGGCATTCCCCCTG...GGCTGGCAGAGCAGTTGGCTGACAGCAACAACCGACATCTGAACACCTACATTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp ACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTAATGGTTCTCTACAGCACGGAGCACTaGGGTGGGGGAGCATGGGGA +
Preference number: 4 (lower is better)
Translates to: TSVLRRRIQNEGPFLMVLYSTEH*GGGAWG
Trigger: TCCCCATGCTCCCCCACCTCAGTGCTCCGTGCTGTA...GAGAACCATTAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp AGGTGTATGTCATCACTGACAAGCCAAAGGGACGCATCTAACCTGGGCCGCCTGTCTCTGTTGTCATGGTaGCCAGCACGCCTTGAGCTC +
Preference number: 4 (lower is better)
Translates to: RCMSSLTSQRDASNLGRLSLLSW*PARLEL
Trigger: GAGCTCAAGGCGTGCTGGTCACCATGACAACAGAGA...CAGGCGGCCCAGGTTAGATGCGTCCCTTTGGCTTGTCAGTGATGACATACACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373946.7
CDS-3UTR GCA 90 bp CCGCCCTCAGGGACTTTTTCCACTATGCTACATGGCCTCCTGGGTGGAGAGGTGATTGTGCTCTCAAATTaGTCATACTCCCCAGGCCGG +
Preference number: 4 (lower is better)
Translates to: PPSGTFSTMLHGLLGGEVIVLSN*SYSPGR
Trigger: CCGGCCTGGGGAGTATGAGCAATTTGAGAGCACAAT...CACCTCTCCACCCAGGAGGCCATGTAGCATAGTGGAAAAAGTCCCTGAGGGCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp CCCAGTCTCTCATCAGTGACAGTACGTCGCAGCTGGGACGTCAGTGTTGCGTCGATTGTGCTCTCAAATTaGTCATACTCCCCAGGCCGG +
Preference number: 4 (lower is better)
Translates to: PSLSSVTVRRSWDVSVASIVLSN*SYSPGR
Trigger: CCGGCCTGGGGAGTATGAGCAATTTGAGAGCACAAT...CGACGCAACACTGACGTCCCAGCTGCGACGTACTGTCACTGATGAGAGACTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp CTGCTCTGCCAGCCCCAGCAGCAGTGCAAGGATGCGGTGTTTCCTGTATATATAACGCTCAAAGAAGGGTaGAGGCCGGTCAATGAGGGC +
Preference number: 4 (lower is better)
Translates to: LLCQPQQQCKDAVFPVYITLKEG*RPVNEG
Trigger: GCCCTCATTGACCGGCCTGCACCCTTCTTTGAGCGT...TATATATACAGGAAACACCGCATCCTTGCACTGCTGCTGGGGCTGGCAGAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp ACAAATGGAATTGCTCGTCTGCTAACTGTAACGTGCAGAACCAGGGCGGGAGGGACGCTCAAAGAAGGGTaGAGGCCGGTCAATGAGGGC +
Preference number: 4 (lower is better)
Translates to: TNGIARLLTVTCRTRAGGTLKEG*RPVNEG
Trigger: GCCCTCATTGACCGGCCTGCACCCTTCTTTGAGCGT...CCCTCCCGCCCTGGTTCTGCACGTTACAGTTAGCAGACGAGCAATTCCATTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp TTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGCAGCTGGGACGTCAGTGTCTGCTCCATCAAGGCTaGGGGACATGGTGTACCGTT +
Preference number: 4 (lower is better)
Translates to: FPSQSLISDSTSQLGRQCLLHQG*GTWCTV
Trigger: AACGGTACACCATGTCCCGCAGCCTTGATGGAGCAG...ACACTGACGTCCCAGCTGCGACGTACTGTCACTGATGAGAGACTGGGAAGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp TCATCAGTGACAGTACGTCGCAGCTGGGACGTCAGTGTTGCGTCGGAGAATCCACTGCTCCATCAAGGCTaGGGGACATGGTGTACCGTT +
Preference number: 4 (lower is better)
Translates to: SSVTVRRSWDVSVASENPLLHQG*GTWCTV
Trigger: AACGGTACACCATGTCCCGCAGCCTTGATGGAGCAG...TGGATTCTCCGACGCAACACTGACGTCCCAGCTGCGACGTACTGTCACTGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp GCTCGTCTGCTAACTGTAACGTGCAGAACCAGGGCGGGAGGGACTTCTACAATCCTGCTCCATCAAGGCTaGGGGACATGGTGTACCGTT +
Preference number: 4 (lower is better)
Translates to: ARLLTVTCRTRAGGTSTILLHQG*GTWCTV
Trigger: AACGGTACACCATGTCCCGCAGCCTTGATGGAGCAG...GATTGTAGAAGTCCCTCCCGCCCTGGTTCTGCACGTTACAGTTAGCAGACGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp TTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTTCAGCCTCTGACCGTTaGCCCCCAGACTCGCCATCC +
Preference number: 4 (lower is better)
Translates to: FYNHRGLACVSYLAGERGSASDR*PPDSPS
Trigger: GGATGGCGAGTCTGGGGGGCAACGGTCAGAGGCTGA...ACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp GCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTAATGGCCCTCCCTCAGCCCTaGTCTCTCATTGGCTTTCTC +
Preference number: 4 (lower is better)
Translates to: AGTSVLRRRIQNEGPFLMALPQP*SLIGFL
Trigger: GAGAAAGCCAATGAGAGAGCAGGGCTGAGGGAGGGC...CATTAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
CDS-3UTR GCA 90 bp CTGCTCTGCCAGCCCCAGCAGCAGTGCAAGGATGCGGTGTTTCCTGTATATATACAGCCCCAGCAGCAGTaGAAGGATGCGGTGTTTCCT +
Preference number: 4 (lower is better)
Translates to: LLCQPQQQCKDAVFPVYIQPQQQ*KDAVFP
Trigger: AGGAAACACCGCATCCTTGCACTGCTGCTGGGGCTG...TATATATACAGGAAACACCGCATCCTTGCACTGCTGCTGGGGCTGGCAGAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp ACAAATGGAATTGCTCGTCTGCTAACTGTAACGTGCAGAACCAGGGCGGGAGGGCAGCCCCAGCAGCAGTaGAAGGATGCGGTGTTTCCT +
Preference number: 4 (lower is better)
Translates to: TNGIARLLTVTCRTRAGGQPQQQ*KDAVFP
Trigger: AGGAAACACCGCATCCTTGCACTGCTGCTGGGGCTG...CCCTCCCGCCCTGGTTCTGCACGTTACAGTTAGCAGACGAGCAATTCCATTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp GACTTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGTCAGCCAACTGCTCTaGCAGCCCCAGCAGCAGTGC +
Preference number: 4 (lower is better)
Translates to: DFYNHRGLACVSYLAGERVSQLL*QPQQQC
Trigger: GCACTGCTGCTGGGGCTGGCAGAGCAGTTGGCTGAC...CCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGAAGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp AACCAGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGCTGTCAGCCAACTaGTCTGCCAGCCCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: NQGGRDFYNHRGLACVSYLLSAN*SASPSS
Trigger: GCTGCTGGGGCTGGCAGAGCAGTTGGCTGACAGCAA...ATAAGAAACGCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCTGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp AAATGTAGGTGTTCAGATGTCGGTTGTTGCTGTCAGCCAACTGCTCTGCCAGCCTTGCTGTCAGCCAACTaGTCTGCCAGCCCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: KCRCSDVGCCCQPTALPALLSAN*SASPSS
Trigger: GCTGCTGGGGCTGGCAGAGCAGTTGGCTGACAGCAA...GGCTGGCAGAGCAGTTGGCTGACAGCAACAACCGACATCTGAACACCTACATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp TACGTCGCAGCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCGAGGAAGGTAGGTTTTaGAGCCCAGTGTCAAGATCC +
Preference number: 4 (lower is better)
Translates to: YVAAGTSVLRRRIQNEGPEEGRF*SPVSRS
Trigger: GGATCTTGACACTGGGCTGCAAAACCTACCTTCCTC...GGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGCTGCGACGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp AACGTGCAGAACCAGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCCAAAGGAGAGTCATCTaGAGTGGCCCTCAGAAGGAC +
Preference number: 4 (lower is better)
Translates to: NVQNQGGRDFYNHRGLACQRRVI*SGPQKD
Trigger: GTCCTTCTGAGGGCCACTGCAGATGACTCTCCTTTG...GCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCTGGTTCTGCACGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp GCTCGTCTGCTAACTGTAACGTGCAGAACCAGGGCGGGAGGGACTTCTACAATCGATGGAGGGAGTGGTTaGTATGAACTCCCTCCCCAC +
Preference number: 4 (lower is better)
Translates to: ARLLTVTCRTRAGGTSTIDGGSG*YELPPH
Trigger: GTGGGGAGGGAGTTCATAGCAACCACTCCCTCCATC...GATTGTAGAAGTCCCTCCCGCCCTGGTTCTGCACGTTACAGTTAGCAGACGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp TACACTGAACCCGTCAGCCCCTACTGTGAGCCAACCCACACCCAGAGTCCAGGTCAAGCCAAGGTCTTATaGAGAGCTGGAGCCTATGAG +
Preference number: 4 (lower is better)
Translates to: YTEPVSPYCEPTHTQSPGQAKVL*RAGAYE
Trigger: CTCATAGGCTCCAGCTCTGCATAAGACCTTGGCTTG...ACCTGGACTCTGGGTGTGGGTTGGCTCACAGTAGGGGCTGACGGGTTCAGTGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp TTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTAATGGTTCTCTGGCTTGGGGCGAGAGTGGGGAGATaGTCTCAGATGGGCCAGCCA +
Preference number: 4 (lower is better)
Translates to: LRRRIQNEGPFLMVLWLGARVGR*SQMGQP
Trigger: TGGCTGGCCCATCTGAGAGCATCTCCCCACTCTCGC...CCCAAGCCAGAGAACCATTAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp GAAGGCCCCTTCTTAATGGTTCTCTGGCTTGGGTTGGACCAGAAATGCCAGGATTTCTGGGGCGATTTCTaGGCCTTGCTGGGCGTGGTC +
Preference number: 4 (lower is better)
Translates to: EGPFLMVLWLGLDQKCQDFWGDF*ALLGVV
Trigger: GACCACGCCCAGCAAGGCCCAGAAATCGCCCCAGAA...ATCCTGGCATTTCTGGTCCAACCCAAGCCAGAGAACCATTAAGAAGGGGCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp AAATGTAGGTGTTCAGATGTCGGTTGTTGCTGTCAGCCAACTGCTCTGCCAGCCTTCTGGGGCGATTTCTaGGCCTTGCTGGGCGTGGTC +
Preference number: 4 (lower is better)
Translates to: KCRCSDVGCCCQPTALPAFWGDF*ALLGVV
Trigger: GACCACGCCCAGCAAGGCCCAGAAATCGCCCCAGAA...GGCTGGCAGAGCAGTTGGCTGACAGCAACAACCGACATCTGAACACCTACATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp ACAAATGGAATTGCTCGTCTGCTAACTGTAACGTGCAGAACCAGGGCGGGAGGGCGTGACAAAGGAGCATaGCAGCCGGCCCGTGATGAT +
Preference number: 4 (lower is better)
Translates to: TNGIARLLTVTCRTRAGGRDKGA*QPARDD
Trigger: ATCATCACGGGCCGGCTGCCATGCTCCTTTGTCACG...CCCTCCCGCCCTGGTTCTGCACGTTACAGTTAGCAGACGAGCAATTCCATTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp GCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTAATGCGTGACAAAGGAGCATaGCAGCCGGCCCGTGATGAT +
Preference number: 4 (lower is better)
Translates to: AGTSVLRRRIQNEGPFLMRDKGA*QPARDD
Trigger: ATCATCACGGGCCGGCTGCCATGCTCCTTTGTCACG...CATTAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp AACGTGCAGAACCAGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCCTCTTGGCTGACCGGTaGTTTGGGAGCTTAAAGCCA +
Preference number: 4 (lower is better)
Translates to: NVQNQGGRDFYNHRGLACLLADR*FGSLKP
Trigger: TGGCTTTAAGCTCCCAAACCACCGGTCAGCCAAGAG...GCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCTGGTTCTGCACGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp GACTTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGTGGCGAGTCTGTGCCTaGGTCCTCCCACTGTACCGG +
Preference number: 4 (lower is better)
Translates to: DFYNHRGLACVSYLAGERWRVCA*VLPLYR
Trigger: CCGGTACAGTGGGAGGACCCAGGCACAGACTCGCCA...CCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGAAGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp TCGCAGCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTCTCCTTGATCTTGGTTaGAGTCCTGACCTCTCCCTC +
Preference number: 4 (lower is better)
Translates to: SQLGRQCCVGESRMKAPSLLDLG*SPDLSL
Trigger: GAGGGAGAGGTCAGGACTCCAACCAAGATCAAGGAG...AGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGCTGCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp GCAGCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTACAGTCTCGATCCCGGTaGATGAGTTTGCTGTTGGGC +
Preference number: 4 (lower is better)
Translates to: AAGTSVLRRRIQNEGPFLQSRSR*MSLLLG
Trigger: GCCCAACAGCAAACTCATCCACCGGGATCGAGACTG...TAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp AACCAGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATGGCCCGGGGACGTGGTaGTTTGACTTTCTCCTCGGA +
Preference number: 4 (lower is better)
Translates to: NQGGRDFYNHRGLACVSYGPGTW*FDFLLG
Trigger: TCCGAGGAGAAAGTCAAACCACCACGTCCCCGGGCC...ATAAGAAACGCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCTGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp AAATGTAGGTGTTCAGATGTCGGTTGTTGCTGTCAGCCAACTGCTCTGCCAGCCGGCCCGGGGACGTGGTaGTTTGACTTTCTCCTCGGA +
Preference number: 4 (lower is better)
Translates to: KCRCSDVGCCCQPTALPAGPGTW*FDFLLG
Trigger: TCCGAGGAGAAAGTCAAACCACCACGTCCCCGGGCC...GGCTGGCAGAGCAGTTGGCTGACAGCAACAACCGACATCTGAACACCTACATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp AAATGTAGGTGTTCAGATGTCGGTTGTTGCTGTCAGCCAACTGCTCTGCCAGCCTGGGGCCCGGGGACGTaGTGGTTTGACTTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: KCRCSDVGCCCQPTALPAWGPGT*WFDFLL
Trigger: GAGGAGAAAGTCAAACCACCACGTCCCCGGGCCCCA...GGCTGGCAGAGCAGTTGGCTGACAGCAACAACCGACATCTGAACACCTACATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp TTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTAATGGTTCTCTGGCTTGGGACCGTGTCCCTCTCCTaGTCCTGGTCCTCATCGCCT +
Preference number: 4 (lower is better)
Translates to: LRRRIQNEGPFLMVLWLGTVSLS*SWSSSP
Trigger: AGGCGATGAGGACCAGGACCAGGAGAGGGACACGGT...CCCAAGCCAGAGAACCATTAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp CCACCATCTTCTACAATGGCTGAGAGCACCACCTCCCTTTGGATATGGAGTTGGACCGTGTCCCTCTCCTaGTCCTGGTCCTCATCGCCT +
Preference number: 4 (lower is better)
Translates to: PPSSTMAESTTSLWIWSWTVSLS*SWSSSP
Trigger: AGGCGATGAGGACCAGGACCAGGAGAGGGACACGGT...CCAACTCCATATCCAAAGGGAGGTGGTGCTCTCAGCCATTGTAGAAGATGGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp TCGTCTGCTAACTGTAACGTGCAGAACCAGGGCGGGAGGGACTTCTACAATCATACCGTGTCCCTCTCCTaGTCCTGGTCCTCATCGCCT +
Preference number: 4 (lower is better)
Translates to: SSANCNVQNQGGRDFYNHTVSLS*SWSSSP
Trigger: AGGCGATGAGGACCAGGACCAGGAGAGGGACACGGT...ATGATTGTAGAAGTCCCTCCCGCCCTGGTTCTGCACGTTACAGTTAGCAGACGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp GAAGGCCCCTTCTTAATGGTTCTCTGGCTTGGGTTGGACCAGAAATGCCAGGATCCAGACTCATCATCCTaGCTGGGGGCCCCCTTGTTG +
Preference number: 4 (lower is better)
Translates to: EGPFLMVLWLGLDQKCQDPDSSS*LGAPLL
Trigger: CAACAAGGGGGCCCCCAGCCAGGATGATGAGTCTGG...ATCCTGGCATTTCTGGTCCAACCCAAGCCAGAGAACCATTAAGAAGGGGCCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp CATCTTCTACAATGGCTGAGAGCACCACCTCCCTTTGGATATGGAGTTGGTTATGTGGGCCTGGGATCATaGCAGCTGCCCCCTTCCCGG +
Preference number: 4 (lower is better)
Translates to: HLLQWLRAPPPFGYGVGYVGLGS*QLPPSR
Trigger: CCGGGAAGGGGGCAGCTGCCATGATCCCAGGCCCAC...ATAACCAACTCCATATCCAAAGGGAGGTGGTGCTCTCAGCCATTGTAGAAGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp CCAGCCCCAGCAGCAGTGCAAGGATGCGGTGTTTCCTGTATATATATCTATATCCACCGTCTGTGGGCCTaGGATCATGGCAGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: PAPAAVQGCGVSCIYIYIHRLWA*DHGSCP
Trigger: GGGGCAGCTGCCATGATCCCAGGCCCACAGACGGTG...GATATAGATATATATACAGGAAACACCGCATCCTTGCACTGCTGCTGGGGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp ACTCTCAAGAAGGGCAGGAAGAAGGTTCTGTGGCTTTTCCACCAGGATTGTAGACGTGGCCACCGTCTGTaGGCCTGGGATCATGGCAGC +
Preference number: 4 (lower is better)
Translates to: TLKKGRKKVLWLFHQDCRRGHRL*AWDHGS
Trigger: GCTGCCATGATCCCAGGCCCACAGACGGTGGCCACG...TCTACAATCCTGGTGGAAAAGCCACAGAACCTTCTTCCTGCCCTTCTTGAGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp GAGGCGGGAGAGAGGAAGGTAGGTTTTGCAGCCCAGTGTCAAGATCCAGAAAGTACAGTACGTCGCAGCTaGGACGTCAGTGTTGCGTCG +
Preference number: 4 (lower is better)
Translates to: EAGERKVGFAAQCQDPESTVRRS*DVSVAS
Trigger: CGACGCAACACTGACGTCCCAGCTGCGACGTACTGT...ACTTTCTGGATCTTGACACTGGGCTGCAAAACCTACCTTCCTCTCTCCCGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp GCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTAATGGGCCGCGTGTCCTGCTaGGATGGATGCTTCTCATTG +
Preference number: 4 (lower is better)
Translates to: AGTSVLRRRIQNEGPFLMGRVSC*DGCFSL
Trigger: CAATGAGAAGCATCCATCCCAGCAGGACACGCGGCC...CATTAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000636016.2
CDS-3UTR CCA 90 bp CTCCCCTCCCACCTTCTTCAGCCTGAGAATAGTCCCTGGCACAAGCAGGTAATCGCTTGTGTCTCGGCGTaGTTTCCTGCTCCGGCTTTA +
Preference number: 4 (lower is better)
Translates to: LPSHLLQPENSPWHKQVIACVSA*FPAPAL
Trigger: TAAAGCCGGAGCAGGAAACCACGCCGAGACACAAGC...GATTACCTGCTTGTGCCAGGGACTATTCTCAGGCTGAAGAAGGTGGGAGGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000636016.2
CDS-3UTR CCA 90 bp TCGCAGCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTCCAGGTCTCCTTAGCTaGGCCAGTTCAGTGAGATCT +
Preference number: 4 (lower is better)
Translates to: SQLGRQCCVGESRMKAPSPGLLS*ASSVRS
Trigger: AGATCTCACTGAACTGGCCCAGCTAAGGAGACCTGG...AGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGCTGCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp CCCTGCCCCAAAGCCAGGTGCAAAATCCACAACAAGGATCCTCCCTCTGAGGTGCCAGGTCTCCTTAGCTaGGCCAGTTCAGTGAGATCT +
Preference number: 4 (lower is better)
Translates to: PCPKARCKIHNKDPPSEVPGLLS*ASSVRS
Trigger: AGATCTCACTGAACTGGCCCAGCTAAGGAGACCTGG...CACCTCAGAGGGAGGATCCTTGTTGTGGATTTTGCACCTGGCTTTGGGGCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp AAGACTGAAAACCAAGGCAAGCCCCGTAGGGAGATAAGGACTAAGCCAGGGACCAGCAGAGTCCCAGACTaGGACCCAGTACCTGAGCAC +
Preference number: 4 (lower is better)
Translates to: KTENQGKPRREIRTKPGTSRVPD*DPVPEH
Trigger: GTGCTCAGGTACTGGGTCCCAGTCTGGGACTCTGCT...GGTCCCTGGCTTAGTCCTTATCTCCCTACGGGGCTTGCCTTGGTTTTCAGTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp GCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTAATGGTCTCAGCTTTGTCCTaGGACAGGGGAGGGCTTTGC +
Preference number: 4 (lower is better)
Translates to: AGTSVLRRRIQNEGPFLMVSALS*DRGGLC
Trigger: GCAAAGCCCTCCCCTGTCCCAGGACAAAGCTGAGAC...CATTAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp ACAAATGGAATTGCTCGTCTGCTAACTGTAACGTGCAGAACCAGGGCGGGAGGGGTCTCAGCTTTGTCCTaGGACAGGGGAGGGCTTTGC +
Preference number: 4 (lower is better)
Translates to: TNGIARLLTVTCRTRAGGVSALS*DRGGLC
Trigger: GCAAAGCCCTCCCCTGTCCCAGGACAAAGCTGAGAC...CCCTCCCGCCCTGGTTCTGCACGTTACAGTTAGCAGACGAGCAATTCCATTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp AAGACTGAAAACCAAGGCAAGCCCCGTAGGGAGATAAGGACTAAGCCAGGGACCGTTCCTAGACCGAAGTaGCCCAGAGAGGATGGAGCC +
Preference number: 4 (lower is better)
Translates to: KTENQGKPRREIRTKPGTVPRPK*PREDGA
Trigger: GGCTCCATCCTCTCTGGGCCACTTCGGTCTAGGAAC...GGTCCCTGGCTTAGTCCTTATCTCCCTACGGGGCTTGCCTTGGTTTTCAGTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp AACGTGCAGAACCAGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCTTCCCCAAACCCTGGTaGCCCATAAACTCCACAAGC +
Preference number: 4 (lower is better)
Translates to: NVQNQGGRDFYNHRGLACFPKPW*PINSTS
Trigger: GCTTGTGGAGTTTATGGGCCACCAGGGTTTGGGGAA...GCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCTGGTTCTGCACGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp TTCAGTGTGCTCAGGACTCCTGGTTCCTGCAAAGATGAGTTCCTAGACCGAAGTTCCCCTCCTCCCTCGTaGCACTGCCTGCATCTCCGT +
Preference number: 4 (lower is better)
Translates to: FSVLRTPGSCKDEFLDRSSPPPS*HCLHLR
Trigger: ACGGAGATGCAGGCAGTGCCACGAGGGAGGAGGGGA...ACTTCGGTCTAGGAACTCATCTTTGCAGGAACCAGGAGTCCTGAGCACACTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp ACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTAATGGTTCTCCACGGAGCACTGAGGTaGGGGAGCATGGGGACGAGA +
Preference number: 4 (lower is better)
Translates to: TSVLRRRIQNEGPFLMVLHGALR*GSMGTR
Trigger: TCTCGTCCCCATGCTCCCCCACCTCAGTGCTCCGTG...GAGAACCATTAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp TTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGCAGCTGGGACGTCAGTGTTCTAGGCTCAGTGTATaGGGTCCCTGCTGGACAGGT +
Preference number: 4 (lower is better)
Translates to: FPSQSLISDSTSQLGRQCSRLSV*GPCWTG
Trigger: ACCTGTCCAGCAGGGACCCCATACACTGAGCCTAGA...ACACTGACGTCCCAGCTGCGACGTACTGTCACTGATGAGAGACTGGGAAGGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373950.6
CDS-3UTR CCA 90 bp CCGCCCTCAGGGACTTTTTCCACTATGCTACATGGCCTCCTGGGTGGAGAGGTGTCCAATAGAAACGACTaGAGTCCTCCCTTGTCGGAG +
Preference number: 4 (lower is better)
Translates to: PPSGTFSTMLHGLLGGEVSNRND*SPPLSE
Trigger: CTCCGACAAGGGAGGACTCCAGTCGTTTCTATTGGA...CACCTCTCCACCCAGGAGGCCATGTAGCATAGTGGAAAAAGTCCCTGAGGGCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS-3UTR CCA 90 bp AGGTGTATGTCATCACTGACAAGCCAAAGGGACGCATCTAACCTGGGCCGCCTGATGGGAGGTTGGGCTTaGAGAAGCTTCCTCCAGAGC +
Preference number: 4 (lower is better)
Translates to: RCMSSLTSQRDASNLGRLMGGWA*RSFLQS
Trigger: GCTCTGGAGGAAGCTTCTCCAAGCCCAACCTCCCAT...CAGGCGGCCCAGGTTAGATGCGTCCCTTTGGCTTGTCAGTGATGACATACACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS-3UTR TCA 90 bp CTGCCAGCCCCAGCAGCAGTGCAAGGATGCGGTGTTTCCTGTATATATATCTATCCAGTAGGGCATGCGTaGCAAAGGAGCATGGCAGCC +
Preference number: 4 (lower is better)
Translates to: LPAPAAVQGCGVSCIYIYPVGHA*QRSMAA
Trigger: GGCTGCCATGCTCCTTTGTCACGCATGCCCTACTGG...ATAGATATATATACAGGAAACACCGCATCCTTGCACTGCTGCTGGGGCTGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp TCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTGCGAAGCGGAGCTCGCTaGCATAGTTGCCCACATGCT +
Preference number: 4 (lower is better)
Translates to: STIIVVWLAFLIWRGKGVRSGAR*HSCPHA
Trigger: AGCATGTGGGCAACTATGTCAGCGAGCTCCGCTTCG...CACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp AACGTGCAGAACCAGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCCACAAACGCCTAACATaGTGTCGATGCCCTCAGAGT +
Preference number: 4 (lower is better)
Translates to: NVQNQGGRDFYNHRGLACHKRLT*CRCPQS
Trigger: ACTCTGAGGGCATCGACATCATGTTAGGCGTTTGTG...GCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCTGGTTCTGCACGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp GGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTGAGCAAGGGATTATACCACAGTCTCTTGGCTaGCCGGTGGTTTGGGAGCTT +
Preference number: 4 (lower is better)
Translates to: GLACVSYLAGERGEQGIIPQSLG*PVVWEL
Trigger: AAGCTCCCAAACCACCGGTCAGCCAAGAGACTGTGG...TATAATCCCTTGCTCACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp AATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTGAGCAACCACAGTCTCTTGGCTaGCCGGTGGTTTGGGAGCTT +
Preference number: 4 (lower is better)
Translates to: NHRGLACVSYLAGERGEQPQSLG*PVVWEL
Trigger: AAGCTCCCAAACCACCGGTCAGCCAAGAGACTGTGG...TTGCTCACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp CCCTGCCCCAAAGCCAGGTGCAAAATCCACAACAAGGATCCTCCCTCTGAGGTGAGCCGGAAGAATGTATaGTGCTCGATGCAGACCTTC +
Preference number: 4 (lower is better)
Translates to: PCPKARCKIHNKDPPSEVSRKNV*CSMQTF
Trigger: GAAGGTCTGCATCGAGCATCATACATTCTTCCGGCT...CACCTCAGAGGGAGGATCCTTGTTGTGGATTTTGCACCTGGCTTTGGGGCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp CCCAGCAGCAGTGCAAGGATGCGGTGTTTCCTGTATATATATCTATATCTCTATGTGCAGGCCGGTCAATaGGGGCGCTGGCCTGGCGAG +
Preference number: 4 (lower is better)
Translates to: PSSSARMRCFLYIYLYLYVQAGQ*GRWPGE
Trigger: CTCGCCAGGCCAGCGCCCTCATTGACCGGCCTGCAC...ATAGAGATATAGATATATATACAGGAAACACCGCATCCTTGCACTGCTGCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp TCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTGCTCGATCCCGGTGGATaGGTTTGCTGTTGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: STIIVVWLAFLIWRGKGVLDPGG*VCCWAP
Trigger: AGGAGCCCAACAGCAAACTCATCCACCGGGATCGAG...CACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp CTGCCAGCCCCAGCAGCAGTGCAAGGATGCGGTGTTTCCTGTATATATATCTATGGGGACGTGGTGGTTTaGCTTTCTCCTCGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: LPAPAAVQGCGVSCIYIYGDVVV*LSPRSP
Trigger: AGGGCTCCGAGGAGAAAGTCAAACCACCACGTCCCC...ATAGATATATATACAGGAAACACCGCATCCTTGCACTGCTGCTGGGGCTGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp ACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTAATGGTTCTCGGGGACGTGGTGGTTTaGCTTTCTCCTCGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: TSVLRRRIQNEGPFLMVLGDVVV*LSPRSP
Trigger: AGGGCTCCGAGGAGAAAGTCAAACCACCACGTCCCC...GAGAACCATTAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp CAGAACCAGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCGTTTCTCTTTCACAGTTTTGGTaGCATGGGTGGTGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: QNQGGRDFYNHRGLACVSLSQFW*HGWWWR
Trigger: CCTCCACCACCACCCATGTCACCAAAACTGTGAAAG...AGAAACGCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCTGGTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp TTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTAATGGTTCTCTGGCTTGGGCCAGTCTCTCATCAGTaGCAGTACGTCGCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: LRRRIQNEGPFLMVLWLGPVSHQ*QYVAAG
Trigger: CCCAGCTGCGACGTACTGTCACTGATGAGAGACTGG...CCCAAGCCAGAGAACCATTAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp CTGCCAGCCCCAGCAGCAGTGCAAGGATGCGGTGTTTCCTGTATATATATCTATGAACTCCCTCCCCACTaGGGCACTCCCATCAACCTG +
Preference number: 4 (lower is better)
Translates to: LPAPAAVQGCGVSCIYIYELPPH*GTPINL
Trigger: CAGGTTGATGGGAGTGCCTCAGTGGGGAGGGAGTTC...ATAGATATATATACAGGAAACACCGCATCCTTGCACTGCTGCTGGGGCTGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp AATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTGAGCAAAGGGAGTGGTTGCTATaGACTCCCTCCCCACTGAGG +
Preference number: 4 (lower is better)
Translates to: NHRGLACVSYLAGERGEQREWLL*TPSPLR
Trigger: CCTCAGTGGGGAGGGAGTTCATAGCAACCACTCCCT...TTGCTCACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp ACTCTCAAGAAGGGCAGGAAGAAGGTTCTGTGGCTTTTCCACCAGGATTGTAGACGTCAGCCCCTACTGTaGGCCAACCCACACCCAGAG +
Preference number: 4 (lower is better)
Translates to: TLKKGRKKVLWLFHQDCRRQPLL*ANPHPE
Trigger: CTCTGGGTGTGGGTTGGCTCACAGTAGGGGCTGACG...TCTACAATCCTGGTGGAAAAGCCACAGAACCTTCTTCCTGCCCTTCTTGAGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp CCAGCCCCAGCAGCAGTGCAAGGATGCGGTGTTTCCTGTATATATATCTATATCCGTCAGCCCCTACTGTaGGCCAACCCACACCCAGAG +
Preference number: 4 (lower is better)
Translates to: PAPAAVQGCGVSCIYIYIRQPLL*ANPHPE
Trigger: CTCTGGGTGTGGGTTGGCTCACAGTAGGGGCTGACG...GATATAGATATATATACAGGAAACACCGCATCCTTGCACTGCTGCTGGGGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp AACGTGCAGAACCAGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCACAGTATTACTACACTaGACCCGTCAGCCCCTACTG +
Preference number: 4 (lower is better)
Translates to: NVQNQGGRDFYNHRGLACTVLLH*TRQPLL
Trigger: CAGTAGGGGCTGACGGGTTCAGTGTAGTAATACTGT...GCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCTGGTTCTGCACGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp TCGTCTGCTAACTGTAACGTGCAGAACCAGGGCGGGAGGGACTTCTACAATCATTCAGGGTCTGCCCCATaGAGCCTCCTTACCATGGCT +
Preference number: 4 (lower is better)
Translates to: SSANCNVQNQGGRDFYNHSGSAP*SLLTMA
Trigger: AGCCATGGTAAGGAGGCTTCATGGGGCAGACCCTGA...ATGATTGTAGAAGTCCCTCCCGCCCTGGTTCTGCACGTTACAGTTAGCAGACGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp CTGCTCTGCCAGCCCCAGCAGCAGTGCAAGGATGCGGTGTTTCCTGTATATATAAGTTCAGCTGTTGACTaGGAGGGAGGTCTCCAAGCC +
Preference number: 4 (lower is better)
Translates to: LLCQPQQQCKDAVFPVYISSAVD*EGGLQA
Trigger: GGCTTGGAGACCTCCCTCTCAGTCAACAGCTGAACT...TATATATACAGGAAACACCGCATCCTTGCACTGCTGCTGGGGCTGGCAGAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp AACGTGCAGAACCAGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCGGTGTATGTCATCACTaGCAAGCCAAAGGGACGCAT +
Preference number: 4 (lower is better)
Translates to: NVQNQGGRDFYNHRGLACGVCHH*QAKGTH
Trigger: ATGCGTCCCTTTGGCTTGTCAGTGATGACATACACC...GCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCTGGTTCTGCACGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp CCTATGAGCAACATCACCCGTCAGTCTCAGCTTTGTCCTGGGACAGGGGAGGGCAAGCAAATGCTATTCTaGTTTCCTGCCCTGCCTCAG +
Preference number: 4 (lower is better)
Translates to: PMSNITRQSQLCPGTGEGKQMLF*FPALPQ
Trigger: CTGAGGCAGGGCAGGAAATCAGAATAGCATTTGCTT...GCCCTCCCCTGTCCCAGGACAAAGCTGAGACTGACGGGTGATGTTGCTCATAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp GCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTAATGATTCTGCTGCCCCGCTaGACTTCCCATTTGCCCAGA +
Preference number: 4 (lower is better)
Translates to: AGTSVLRRRIQNEGPFLMILLPR*TSHLPR
Trigger: TCTGGGCAAATGGGAAGTTCAGCGGGGCAGCAGAAT...CATTAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp TCGCAGCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTGGTTCCTGCAAAGATaGGTTCCTAGACCGAAGTGG +
Preference number: 4 (lower is better)
Translates to: SQLGRQCCVGESRMKAPSWFLQR*VPRPKW
Trigger: CCACTTCGGTCTAGGAACTCATCTTTGCAGGAACCA...AGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGCTGCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp ACAAATGGAATTGCTCGTCTGCTAACTGTAACGTGCAGAACCAGGGCGGGAGGGCAAGGATCCTCCCTCTaGGGTGTGTTCAGTGTGCTC +
Preference number: 4 (lower is better)
Translates to: TNGIARLLTVTCRTRAGGQGSSL*GVFSVL
Trigger: GAGCACACTGAACACACCTCAGAGGGAGGATCCTTG...CCCTCCCGCCCTGGTTCTGCACGTTACAGTTAGCAGACGAGCAATTCCATTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp CAGAACCAGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTCCCACGGGTGCCTCTaGAGATACGTCATTTGGAAG +
Preference number: 4 (lower is better)
Translates to: QNQGGRDFYNHRGLACVSSHGCL*RYVIWK
Trigger: CTTCCAAATGACGTATCTTCAGAGGCACCCGTGGGA...AGAAACGCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCTGGTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS-3UTR TCA 90 bp TTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTCGTGGTTTCACAGCCTaGATTGGGGGACACGGGCTC +
Preference number: 4 (lower is better)
Translates to: FYNHRGLACVSYLAGERGRGFTA*IGGHGL
Trigger: GAGCCCGTGTCCCCCAATTCAGGCTGTGAAACCACG...ACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS-3UTR TCA 90 bp GCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTAATGACATGCAGCGGTTCCTaGTGGTTGCCTCTCTGGTGT +
Preference number: 4 (lower is better)
Translates to: AGTSVLRRRIQNEGPFLMTCSGS*WLPLWC
Trigger: ACACCAGAGAGGCAACCATCAGGAACCGCTGCATGT...CATTAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS-3UTR TCA 90 bp CCACCATCTTCTACAATGGCTGAGAGCACCACCTCCCTTTGGATATGGAGTTGGACGCCCTGTCCTCTGTaGGGAGGGTGCTTCTTCAGT +
Preference number: 4 (lower is better)
Translates to: PPSSTMAESTTSLWIWSWTPCPL*GGCFFS
Trigger: ACTGAAGAAGCACCCTCCTCACAGAGGACAGGGCGT...CCAACTCCATATCCAAAGGGAGGTGGTGCTCTCAGCCATTGTAGAAGATGGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS-3UTR TCA 90 bp GCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTAATGAGCGCTTCTCTTCCCTaGCCGCATCTCCGGATTTGT +
Preference number: 4 (lower is better)
Translates to: AGTSVLRRRIQNEGPFLMSASLP*PHLRIC
Trigger: ACAAATCCGGAGATGCGGTCAGGGAAGAGAAGCGCT...CATTAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS-3UTR GCA 90 bp ACTCTCAAGAAGGGCAGGAAGAAGGTTCTGTGGCTTTTCCACCAGGATTGTAGAGCGATTTCTGGGCCTTaGTGGGCGTGGTCCTCTCCG +
Preference number: 4 (lower is better)
Translates to: TLKKGRKKVLWLFHQDCRAISGP*WAWSSP
Trigger: CGGAGAGGACCACGCCCAGCAAGGCCCAGAAATCGC...TCTACAATCCTGGTGGAAAAGCCACAGAACCTTCTTCCTGCCCTTCTTGAGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp GGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTGAGCAAGGGATTATAGAGCCCAGTAGGGCATaGGTGACAAAGGAGCATGGC +
Preference number: 4 (lower is better)
Translates to: GLACVSYLAGERGEQGIIEPSRA*VTKEHG
Trigger: GCCATGCTCCTTTGTCACGCATGCCCTACTGGGCTC...TATAATCCCTTGCTCACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp AATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTGAGCAAGAGCCCAGTAGGGCATaGGTGACAAAGGAGCATGGC +
Preference number: 4 (lower is better)
Translates to: NHRGLACVSYLAGERGEQEPSRA*VTKEHG
Trigger: GCCATGCTCCTTTGTCACGCATGCCCTACTGGGCTC...TTGCTCACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp TCATCAGTGACAGTACGTCGCAGCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAGTCCTTGGCATGGTaGAGGTCTACTCCGTACATG +
Preference number: 4 (lower is better)
Translates to: SSVTVRRSWDVSVASENPESLAW*RSTPYM
Trigger: CATGTACGGAGTAGACCTGCACCATGCCAAGGACTC...TGGATTCTCCGACGCAACACTGACGTCCCAGCTGCGACGTACTGTCACTGATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp AACGTGCAGAACCAGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCATTGTGCTCTCAAATTaGTCATACTCCCCAGGCCGG +
Preference number: 4 (lower is better)
Translates to: NVQNQGGRDFYNHRGLACIVLSN*SYSPGR
Trigger: CCGGCCTGGGGAGTATGAGCAATTTGAGAGCACAAT...GCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCTGGTTCTGCACGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp CCCTGCCCCAAAGCCAGGTGCAAAATCCACAACAAGGATCCTCCCTCTGAGGTGATTGTGCTCTCAAATTaGTCATACTCCCCAGGCCGG +
Preference number: 4 (lower is better)
Translates to: PCPKARCKIHNKDPPSEVIVLSN*SYSPGR
Trigger: CCGGCCTGGGGAGTATGAGCAATTTGAGAGCACAAT...CACCTCAGAGGGAGGATCCTTGTTGTGGATTTTGCACCTGGCTTTGGGGCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp AAATGTAGGTGTTCAGATGTCGGTTGTTGCTGTCAGCCAACTGCTCTGCCAGCCACGCTCAAAGAAGGGTaGAGGCCGGTCAATGAGGGC +
Preference number: 4 (lower is better)
Translates to: KCRCSDVGCCCQPTALPATLKEG*RPVNEG
Trigger: GCCCTCATTGACCGGCCTGCACCCTTCTTTGAGCGT...GGCTGGCAGAGCAGTTGGCTGACAGCAACAACCGACATCTGAACACCTACATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp TTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTTGGGCGGGAGAACTCTaGTCCATCAAGGCTGCGGGA +
Preference number: 4 (lower is better)
Translates to: FYNHRGLACVSYLAGERGWAGEL*SIKAAG
Trigger: TCCCGCAGCCTTGATGGAGCAGAGTTCTCCCGCCCA...ACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp GAAGGCCCCTTCTTAATGGTTCTCTGGCTTGGGTTGGACCAGAAATGCCAGGATGTCACCGTCAGGCCCTaGATCATGGTTCTCGCTGAC +
Preference number: 4 (lower is better)
Translates to: EGPFLMVLWLGLDQKCQDVTVRP*IMVLAD
Trigger: GTCAGCGAGAACCATGATGCAGGGCCTGACGGTGAC...ATCCTGGCATTTCTGGTCCAACCCAAGCCAGAGAACCATTAAGAAGGGGCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp CCAGCCCCAGCAGCAGTGCAAGGATGCGGTGTTTCCTGTATATATATCTATATCTCAGCCTCTGACCGTTaGCCCCCAGACTCGCCATCC +
Preference number: 4 (lower is better)
Translates to: PAPAAVQGCGVSCIYIYISASDR*PPDSPS
Trigger: GGATGGCGAGTCTGGGGGGCAACGGTCAGAGGCTGA...GATATAGATATATATACAGGAAACACCGCATCCTTGCACTGCTGCTGGGGCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp CCCAGTCTCTCATCAGTGACAGTACGTCGCAGCTGGGACGTCAGTGTTGCGTCGTTGATGCTGGCCTGGTaGTTCAGCAAGACATCTTCT +
Preference number: 4 (lower is better)
Translates to: PSLSSVTVRRSWDVSVASLMLAW*FSKTSS
Trigger: AGAAGATGTCTTGCTGAAGCACCAGGCCAGCATCAA...CGACGCAACACTGACGTCCCAGCTGCGACGTACTGTCACTGATGAGAGACTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp GAAGGCCCCTTCTTAATGGTTCTCTGGCTTGGGTTGGACCAGAAATGCCAGGATGCCCTCCCTCAGCCCTaGTCTCTCATTGGCTTTCTC +
Preference number: 4 (lower is better)
Translates to: EGPFLMVLWLGLDQKCQDALPQP*SLIGFL
Trigger: GAGAAAGCCAATGAGAGAGCAGGGCTGAGGGAGGGC...ATCCTGGCATTTCTGGTCCAACCCAAGCCAGAGAACCATTAAGAAGGGGCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
CDS-3UTR GCA 90 bp ACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTAATGGTTCTCCGAGCTCAGGCAGGCTaGGGGAGAAGTCTTCGAAGG +
Preference number: 4 (lower is better)
Translates to: TSVLRRRIQNEGPFLMVLRAQAG*GRSLRR
Trigger: CCTTCGAAGACTTCTCCCGCAGCCTGCCTGAGCTCG...GAGAACCATTAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp TCGCAGCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTGGGTTGGACCAGAAATaGCAGGATCTCTTCACAGAG +
Preference number: 4 (lower is better)
Translates to: SQLGRQCCVGESRMKAPSGLDQK*QDLFTE
Trigger: CTCTGTGAAGAGATCCTGGCATTTCTGGTCCAACCC...AGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGCTGCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp ACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTAATGGTTCTCTTGCTGTCAGCCAACTaGTCTGCCAGCCCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: TSVLRRRIQNEGPFLMVLLLSAN*SASPSS
Trigger: GCTGCTGGGGCTGGCAGAGCAGTTGGCTGACAGCAA...GAGAACCATTAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp AACGTGCAGAACCAGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCTCAGATGTCGGTTGTTaGTGTCAGCCAACTGCTCTG +
Preference number: 4 (lower is better)
Translates to: NVQNQGGRDFYNHRGLACSDVGC*CQPTAL
Trigger: CAGAGCAGTTGGCTGACAGCAACAACCGACATCTGA...GCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCTGGTTCTGCACGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp GCTCGTCTGCTAACTGTAACGTGCAGAACCAGGGCGGGAGGGACTTCTACAATCCATCGTGGTCTGGCTTaGGTTTCTTATTTGGCGGGG +
Preference number: 4 (lower is better)
Translates to: ARLLTVTCRTRAGGTSTIHRGLA*VSYLAG
Trigger: CCCCGCCAAATAAGAAACGCAAGCCAGACCACGATG...GATTGTAGAAGTCCCTCCCGCCCTGGTTCTGCACGTTACAGTTAGCAGACGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp CTCCCCTCCCACCTTCTTCAGCCTGAGAATAGTCCCTGGCACAAGCAGGTAATCCATCGTGGTCTGGCTTaGGTTTCTTATTTGGCGGGG +
Preference number: 4 (lower is better)
Translates to: LPSHLLQPENSPWHKQVIHRGLA*VSYLAG
Trigger: CCCCGCCAAATAAGAAACGCAAGCCAGACCACGATG...GATTACCTGCTTGTGCCAGGGACTATTCTCAGGCTGAAGAAGGTGGGAGGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp TTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTAATGGTTCTCTGGCTTGGGCTGCTAACTGTAACGTaGAGAACCAGGGCGGGAGGG +
Preference number: 4 (lower is better)
Translates to: LRRRIQNEGPFLMVLWLGLLTVT*RTRAGG
Trigger: CCCTCCCGCCCTGGTTCTGCACGTTACAGTTAGCAG...CCCAAGCCAGAGAACCATTAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp AAATGTAGGTGTTCAGATGTCGGTTGTTGCTGTCAGCCAACTGCTCTGCCAGCCCTGCTAACTGTAACGTaGAGAACCAGGGCGGGAGGG +
Preference number: 4 (lower is better)
Translates to: KCRCSDVGCCCQPTALPALLTVT*RTRAGG
Trigger: CCCTCCCGCCCTGGTTCTGCACGTTACAGTTAGCAG...GGCTGGCAGAGCAGTTGGCTGACAGCAACAACCGACATCTGAACACCTACATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp TTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGCAGCTGGGACGTCAGTGTCAAAGGAGAGTCATCTaGAGTGGCCCTCAGAAGGAC +
Preference number: 4 (lower is better)
Translates to: FPSQSLISDSTSQLGRQCQRRVI*SGPQKD
Trigger: GTCCTTCTGAGGGCCACTGCAGATGACTCTCCTTTG...ACACTGACGTCCCAGCTGCGACGTACTGTCACTGATGAGAGACTGGGAAGGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp CTTTTCTTTTTCTCATTTCAAAGGAGAGTCATCTGCAGTGGCCCTCAGAAGGACTGGGTGGCCGTGGCCTaGAGGGGTCACAGGGGTGGT +
Preference number: 4 (lower is better)
Translates to: LFFFSFQRRVICSGPQKDWVAVA*RGHRGG
Trigger: ACCACCCCTGTGACCCCTGCAGGCCACGGCCACCCA...GTCCTTCTGAGGGCCACTGCAGATGACTCTCCTTTGAAATGAGAAAAAGAAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000636016.2
CDS-3UTR GCA 90 bp ACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTAATGGTTCTCGCAGGCCGCGTGTCCTaGTGGGATGGATGCTTCTCA +
Preference number: 4 (lower is better)
Translates to: TSVLRRRIQNEGPFLMVLAGRVS*WDGCFS
Trigger: TGAGAAGCATCCATCCCAGCAGGACACGCGGCCTGC...GAGAACCATTAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000636016.2
CDS-3UTR GCA 90 bp TACACTGAACCCGTCAGCCCCTACTGTGAGCCAACCCACACCCAGAGTCCAGGTGGACGACATCTGTGTTaGTTCTTTCTTGCCAAACCC +
Preference number: 4 (lower is better)
Translates to: YTEPVSPYCEPTHTQSPGGRHLC*FFLAKP
Trigger: GGGTTTGGCAAGAAAGAAGCAACACAGATGTCGTCC...ACCTGGACTCTGGGTGTGGGTTGGCTCACAGTAGGGGCTGACGGGTTCAGTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp AACGTGCAGAACCAGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCCAAGCCAAGGTCTTATaGAGAGCTGGAGCCTATGAG +
Preference number: 4 (lower is better)
Translates to: NVQNQGGRDFYNHRGLACQAKVL*RAGAYE
Trigger: CTCATAGGCTCCAGCTCTGCATAAGACCTTGGCTTG...GCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCTGGTTCTGCACGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp CTGCCAGCCCCAGCAGCAGTGCAAGGATGCGGTGTTTCCTGTATATATATCTATCCTCGTGGCACTGCCTaGATCTCCGTAGAAGGGAGG +
Preference number: 4 (lower is better)
Translates to: LPAPAAVQGCGVSCIYIYPRGTA*ISVEGR
Trigger: CCTCCCTTCTACGGAGATGCAGGCAGTGCCACGAGG...ATAGATATATATACAGGAAACACCGCATCCTTGCACTGCTGCTGGGGCTGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp CAGAACCAGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTTCTGTGTCAGGGTCTaGCTTGCTGGAACCTGTTCC +
Preference number: 4 (lower is better)
Translates to: QNQGGRDFYNHRGLACVSFCVRV*LAGTCS
Trigger: GGAACAGGTTCCAGCAAGGCAGACCCTGACACAGAA...AGAAACGCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCTGGTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373950.6
CDS-3UTR GCA 90 bp CAGAACCAGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCGTTTCTCTACCTTGGAGAGTCTaGCGTTGGCAAGGATACCAG +
Preference number: 4 (lower is better)
Translates to: QNQGGRDFYNHRGLACVSLPWRV*RWQGYQ
Trigger: CTGGTATCCTTGCCAACGGCAGACTCTCCAAGGTAG...AGAAACGCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCTGGTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS-3UTR CCA 90 bp TCCCACCTTCTTCAGCCTGAGAATAGTCCCTGGCACAAGCAGGTAATCAGTAAAGGGCCTTGCTGGGCGTaGTCCTCTCCGAAAGGCCAT +
Preference number: 4 (lower is better)
Translates to: SHLLQPENSPWHKQVISKGPCWA*SSPKGH
Trigger: ATGGCCTTTCGGAGAGGACCACGCCCAGCAAGGCCC...TTTACTGATTACCTGCTTGTGCCAGGGACTATTCTCAGGCTGAAGAAGGTGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp AACGTGCAGAACCAGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCTTCTTGGCAATCTTCTaGGGCGATTTCTGGGCCTTG +
Preference number: 4 (lower is better)
Translates to: NVQNQGGRDFYNHRGLACFLAIF*GDFWAL
Trigger: CAAGGCCCAGAAATCGCCCCAGAAGATTGCCAAGAA...GCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCTGGTTCTGCACGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp TCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTGAGGTCAAACAGCACCTaGCCCCGGCCATGTTTCTCC +
Preference number: 4 (lower is better)
Translates to: STIIVVWLAFLIWRGKGVRSNST*PRPCFS
Trigger: GGAGAAACATGGCCGGGGCCAGGTGCTGTTTGACCT...CACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp TCGTCTGCTAACTGTAACGTGCAGAACCAGGGCGGGAGGGACTTCTACAATCATAGGTCAAACAGCACCTaGCCCCGGCCATGTTTCTCC +
Preference number: 4 (lower is better)
Translates to: SSANCNVQNQGGRDFYNHRSNST*PRPCFS
Trigger: GGAGAAACATGGCCGGGGCCAGGTGCTGTTTGACCT...ATGATTGTAGAAGTCCCTCCCGCCCTGGTTCTGCACGTTACAGTTAGCAGACGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp AGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGTGACAAAGGAGCATaGCAGCCGGCCCGTGATGAT +
Preference number: 4 (lower is better)
Translates to: RAGGTSTIIVVWLAFLIWRDKGA*QPARDD
Trigger: ATCATCACGGGCCGGCTGCCATGCTCCTTTGTCACG...CCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp ATATATATGCTTTTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGCAGCTGTCCAGCTCCCGGGTCTaGTTAGGGGCGAAGCGGAGC +
Preference number: 4 (lower is better)
Translates to: IYMLFPSQSLISDSTSQLSSSRV*LGAKRS
Trigger: GCTCCGCTTCGCCCCTAACCAGACCCGGGAGCTGGA...CAGCTGCGACGTACTGTCACTGATGAGAGACTGGGAAGGGAAAAGCATATATAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp AGGTGTATGTCATCACTGACAAGCCAAAGGGACGCATCTAACCTGGGCCGCCTGCTCTTGGCTGACCGGTaGTTTGGGAGCTTAAAGCCA +
Preference number: 4 (lower is better)
Translates to: RCMSSLTSQRDASNLGRLLLADR*FGSLKP
Trigger: TGGCTTTAAGCTCCCAAACCACCGGTCAGCCAAGAG...CAGGCGGCCCAGGTTAGATGCGTCCCTTTGGCTTGTCAGTGATGACATACACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp GCAGCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTACTCTTGGCTGACCGGTaGTTTGGGAGCTTAAAGCCA +
Preference number: 4 (lower is better)
Translates to: AAGTSVLRRRIQNEGPFLLLADR*FGSLKP
Trigger: TGGCTTTAAGCTCCCAAACCACCGGTCAGCCAAGAG...TAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp TTAATGGTTCTCTGGCTTGGGTTGGACCAGAAATGCCAGGATCTCTTCACAGAGTCACCAGGAAGCCCTTaGGTGGGGGCTCAGGGGACA +
Preference number: 4 (lower is better)
Translates to: LMVLWLGLDQKCQDLFTESPGSP*VGAQGT
Trigger: TGTCCCCTGAGCCCCCACCCAAGGGCTTCCTGGTGA...CTCTGTGAAGAGATCCTGGCATTTCTGGTCCAACCCAAGCCAGAGAACCATTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp TGCTGGAGAAGAACAAATGGAATTGCTCGTCTGCTAACTGTAACGTGCAGAACCATGAGGGCGCTGGCCTaGCGAGTCTGTGCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: CWRRTNGIARLLTVTCRTMRALA*RVCAWV
Trigger: GACCCAGGCACAGACTCGCCAGGCCAGCGCCCTCAT...GGTTCTGCACGTTACAGTTAGCAGACGAGCAATTCCATTTGTTCTTCTCCAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp ATATATATGCTTTTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGCAGCTGCTCGCTGACCGAGGCTaGGCGGGAGAACTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: IYMLFPSQSLISDSTSQLLADRG*AGELCS
Trigger: GGAGCAGAGTTCTCCCGCCCAGCCTCGGTCAGCGAG...CAGCTGCGACGTACTGTCACTGATGAGAGACTGGGAAGGGAAAAGCATATATAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp GCATTCAAGTGGGCCTTAGAGATGCTGGAGAAGAACAAATGGAATTGCTCGTCTCTCGCTGACCGAGGCTaGGCGGGAGAACTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: AFKWALEMLEKNKWNCSSLADRG*AGELCS
Trigger: GGAGCAGAGTTCTCCCGCCCAGCCTCGGTCAGCGAG...AGACGAGCAATTCCATTTGTTCTTCTCCAGCATCTCTAAGGCCCACTTGAATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp AATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTGAGCAATCAGGCCCTGCATCATaGTTCTCGCTGACCGAGGCT +
Preference number: 4 (lower is better)
Translates to: NHRGLACVSYLAGERGEQSGPAS*FSLTEA
Trigger: AGCCTCGGTCAGCGAGAACCATGATGCAGGGCCTGA...TTGCTCACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp TCATCAGTGACAGTACGTCGCAGCTGGGACGTCAGTGTTGCGTCGGAGAATCCACTCCTTGATCTTGGTTaGAGTCCTGACCTCTCCCTC +
Preference number: 4 (lower is better)
Translates to: SSVTVRRSWDVSVASENPLLDLG*SPDLSL
Trigger: GAGGGAGAGGTCAGGACTCCAACCAAGATCAAGGAG...TGGATTCTCCGACGCAACACTGACGTCCCAGCTGCGACGTACTGTCACTGATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp CAGAACCAGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCGTTTCTCTCCTTGATCTTGGTTaGAGTCCTGACCTCTCCCTC +
Preference number: 4 (lower is better)
Translates to: QNQGGRDFYNHRGLACVSLLDLG*SPDLSL
Trigger: GAGGGAGAGGTCAGGACTCCAACCAAGATCAAGGAG...AGAAACGCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCTGGTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp CCAGGATGGTCACCCAGAACTCCTAACCGCCCTCAGGGACTTTTTCCACTATGCCTCCTTGATCTTGGTTaGAGTCCTGACCTCTCCCTC +
Preference number: 4 (lower is better)
Translates to: PGWSPRTPNRPQGLFPLCLLDLG*SPDLSL
Trigger: GAGGGAGAGGTCAGGACTCCAACCAAGATCAAGGAG...GCATAGTGGAAAAAGTCCCTGAGGGCGGTTAGGAGTTCTGGGTGACCATCCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp CTGCTCTGCCAGCCCCAGCAGCAGTGCAAGGATGCGGTGTTTCCTGTATATATACAGTCTCGATCCCGGTaGATGAGTTTGCTGTTGGGC +
Preference number: 4 (lower is better)
Translates to: LLCQPQQQCKDAVFPVYIQSRSR*MSLLLG
Trigger: GCCCAACAGCAAACTCATCCACCGGGATCGAGACTG...TATATATACAGGAAACACCGCATCCTTGCACTGCTGCTGGGGCTGGCAGAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp AGGAAATGTAGGTGTTCAGATGTCGGTTGTTGCTGTCAGCCAACTGCTCTGCCATGGGGCCCGGGGACGTaGTGGTTTGACTTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: RKCRCSDVGCCCQPTALPWGPGT*WFDFLL
Trigger: GAGGAGAAAGTCAAACCACCACGTCCCCGGGCCCCA...TGGCAGAGCAGTTGGCTGACAGCAACAACCGACATCTGAACACCTACATTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp AAATGTAGGTGTTCAGATGTCGGTTGTTGCTGTCAGCCAACTGCTCTGCCAGCCTCCCTCTCCTGGTCCTaGTCCTCATCGCCTGTGTCA +
Preference number: 4 (lower is better)
Translates to: KCRCSDVGCCCQPTALPASLSWS*SSSPVS
Trigger: TGACACAGGCGATGAGGACCAGGACCAGGAGAGGGA...GGCTGGCAGAGCAGTTGGCTGACAGCAACAACCGACATCTGAACACCTACATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp AGGAAATGTAGGTGTTCAGATGTCGGTTGTTGCTGTCAGCCAACTGCTCTGCCAACCGTGTCCCTCTCCTaGTCCTGGTCCTCATCGCCT +
Preference number: 4 (lower is better)
Translates to: RKCRCSDVGCCCQPTALPTVSLS*SWSSSP
Trigger: AGGCGATGAGGACCAGGACCAGGAGAGGGACACGGT...TGGCAGAGCAGTTGGCTGACAGCAACAACCGACATCTGAACACCTACATTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp CTGCTCTGCCAGCCCCAGCAGCAGTGCAAGGATGCGGTGTTTCCTGTATATATACGCTCAATGGCCAGGTaGTTGTCCTTCAGGAACACC +
Preference number: 4 (lower is better)
Translates to: LLCQPQQQCKDAVFPVYIRSMAR*LSFRNT
Trigger: GGTGTTCCTGAAGGACAACCACCTGGCCATTGAGCG...TATATATACAGGAAACACCGCATCCTTGCACTGCTGCTGGGGCTGGCAGAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp AGGAAATGTAGGTGTTCAGATGTCGGTTGTTGCTGTCAGCCAACTGCTCTGCCACCAGACTCATCATCCTaGCTGGGGGCCCCCTTGTTG +
Preference number: 4 (lower is better)
Translates to: RKCRCSDVGCCCQPTALPPDSSS*LGAPLL
Trigger: CAACAAGGGGGCCCCCAGCCAGGATGATGAGTCTGG...TGGCAGAGCAGTTGGCTGACAGCAACAACCGACATCTGAACACCTACATTTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp GCATTCAAGTGGGCCTTAGAGATGCTGGAGAAGAACAAATGGAATTGCTCGTCTCGTGGCCACCGTCTGTaGGCCTGGGATCATGGCAGC +
Preference number: 4 (lower is better)
Translates to: AFKWALEMLEKNKWNCSSRGHRL*AWDHGS
Trigger: GCTGCCATGATCCCAGGCCCACAGACGGTGGCCACG...AGACGAGCAATTCCATTTGTTCTTCTCCAGCATCTCTAAGGCCCACTTGAATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp GCAGCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTAAGGTCAGGATTCCTGTaGCTTCTTGTCCCTCTCCTC +
Preference number: 4 (lower is better)
Translates to: AAGTSVLRRRIQNEGPFLRSGFL*LLVPLL
Trigger: GAGGAGAGGGACAAGAAGCCACAGGAATCCTGACCT...TAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp TCATCAGTGACAGTACGTCGCAGCTGGGACGTCAGTGTTGCGTCGGAGAATCCAAGGTCAGGATTCCTGTaGCTTCTTGTCCCTCTCCTC +
Preference number: 4 (lower is better)
Translates to: SSVTVRRSWDVSVASENPRSGFL*LLVPLL
Trigger: GAGGAGAGGGACAAGAAGCCACAGGAATCCTGACCT...TGGATTCTCCGACGCAACACTGACGTCCCAGCTGCGACGTACTGTCACTGATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp GCTCGTCTGCTAACTGTAACGTGCAGAACCAGGGCGGGAGGGACTTCTACAATCAGGTCAGGATTCCTGTaGCTTCTTGTCCCTCTCCTC +
Preference number: 4 (lower is better)
Translates to: ARLLTVTCRTRAGGTSTIRSGFL*LLVPLL
Trigger: GAGGAGAGGGACAAGAAGCCACAGGAATCCTGACCT...GATTGTAGAAGTCCCTCCCGCCCTGGTTCTGCACGTTACAGTTAGCAGACGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp GAAGGCCCCTTCTTAATGGTTCTCTGGCTTGGGTTGGACCAGAAATGCCAGGATACAGTACGTCGCAGCTaGGACGTCAGTGTTGCGTCG +
Preference number: 4 (lower is better)
Translates to: EGPFLMVLWLGLDQKCQDTVRRS*DVSVAS
Trigger: CGACGCAACACTGACGTCCCAGCTGCGACGTACTGT...ATCCTGGCATTTCTGGTCCAACCCAAGCCAGAGAACCATTAAGAAGGGGCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp TTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTAATGGTTCTCTGGCTTGGGACAGTACGTCGCAGCTaGGACGTCAGTGTTGCGTCG +
Preference number: 4 (lower is better)
Translates to: LRRRIQNEGPFLMVLWLGTVRRS*DVSVAS
Trigger: CGACGCAACACTGACGTCCCAGCTGCGACGTACTGT...CCCAAGCCAGAGAACCATTAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp CCCAGTCTCTCATCAGTGACAGTACGTCGCAGCTGGGACGTCAGTGTTGCGTCGTCCTTTGCATTCAAGTaGGCCTTAGAGATGCTGGAG +
Preference number: 4 (lower is better)
Translates to: PSLSSVTVRRSWDVSVASSFAFK*ALEMLE
Trigger: CTCCAGCATCTCTAAGGCCCACTTGAATGCAAAGGA...CGACGCAACACTGACGTCCCAGCTGCGACGTACTGTCACTGATGAGAGACTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp TACACTGAACCCGTCAGCCCCTACTGTGAGCCAACCCACACCCAGAGTCCAGGTTCCTTTGCATTCAAGTaGGCCTTAGAGATGCTGGAG +
Preference number: 4 (lower is better)
Translates to: YTEPVSPYCEPTHTQSPGSFAFK*ALEMLE
Trigger: CTCCAGCATCTCTAAGGCCCACTTGAATGCAAAGGA...ACCTGGACTCTGGGTGTGGGTTGGCTCACAGTAGGGGCTGACGGGTTCAGTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp TATATATATATGCTTTTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGCAGGCCTCTGGGTGGCCGTaGCCTGCAGGGGTCACAGGG +
Preference number: 4 (lower is better)
Translates to: YIYMLFPSQSLISDSTSQASGWP*PAGVTG
Trigger: CCCTGTGACCCCTGCAGGCCACGGCCACCCAGAGGC...CTGCGACGTACTGTCACTGATGAGAGACTGGGAAGGGAAAAGCATATATATATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000636016.2
CDS-3UTR CCA 90 bp TTCAGTGTGCTCAGGACTCCTGGTTCCTGCAAAGATGAGTTCCTAGACCGAAGTGCTTCTCATTGGAGTTaGCCTCTGGGTGGCCGTGGC +
Preference number: 4 (lower is better)
Translates to: FSVLRTPGSCKDEFLDRSASHWS*PLGGRG
Trigger: GCCACGGCCACCCAGAGGCCAACTCCAATGAGAAGC...ACTTCGGTCTAGGAACTCATCTTTGCAGGAACCAGGAGTCCTGAGCACACTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000636016.2
CDS-3UTR CCA 90 bp TACACTGAACCCGTCAGCCCCTACTGTGAGCCAACCCACACCCAGAGTCCAGGTGAAGGTGTCTTGAACTaGCATTTTGGGGACGACATC +
Preference number: 4 (lower is better)
Translates to: YTEPVSPYCEPTHTQSPGEGVLN*HFGDDI
Trigger: GATGTCGTCCCCAAAATGCCAGTTCAAGACACCTTC...ACCTGGACTCTGGGTGTGGGTTGGCTCACAGTAGGGGCTGACGGGTTCAGTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp TTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTAATGGTTCTCTGGCTTGGGAGCAGAGTCCCAGACTaGGACCCAGTACCTGAGCAC +
Preference number: 4 (lower is better)
Translates to: LRRRIQNEGPFLMVLWLGSRVPD*DPVPEH
Trigger: GTGCTCAGGTACTGGGTCCCAGTCTGGGACTCTGCT...CCCAAGCCAGAGAACCATTAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp CCAGGATGGTCACCCAGAACTCCTAACCGCCCTCAGGGACTTTTTCCACTATGCCACCATCTTCTACAATaGCTGAGAGCACCACCTCCC +
Preference number: 4 (lower is better)
Translates to: PGWSPRTPNRPQGLFPLCHHLLQ*LRAPPP
Trigger: GGGAGGTGGTGCTCTCAGCCATTGTAGAAGATGGTG...GCATAGTGGAAAAAGTCCCTGAGGGCGGTTAGGAGTTCTGGGTGACCATCCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp TCATCAGTGACAGTACGTCGCAGCTGGGACGTCAGTGTTGCGTCGGAGAATCCACACCATCTTCTACAATaGCTGAGAGCACCACCTCCC +
Preference number: 4 (lower is better)
Translates to: SSVTVRRSWDVSVASENPHHLLQ*LRAPPP
Trigger: GGGAGGTGGTGCTCTCAGCCATTGTAGAAGATGGTG...TGGATTCTCCGACGCAACACTGACGTCCCAGCTGCGACGTACTGTCACTGATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp CTCCCCTCCCACCTTCTTCAGCCTGAGAATAGTCCCTGGCACAAGCAGGTAATCCACCATCTTCTACAATaGCTGAGAGCACCACCTCCC +
Preference number: 4 (lower is better)
Translates to: LPSHLLQPENSPWHKQVIHHLLQ*LRAPPP
Trigger: GGGAGGTGGTGCTCTCAGCCATTGTAGAAGATGGTG...GATTACCTGCTTGTGCCAGGGACTATTCTCAGGCTGAAGAAGGTGGGAGGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp TCGTCTGCTAACTGTAACGTGCAGAACCAGGGCGGGAGGGACTTCTACAATCATGAGGAAGCCCACGTGTaGCAGAGAGCAATGCCAAGC +
Preference number: 4 (lower is better)
Translates to: SSANCNVQNQGGRDFYNHEEAHV*QRAMPS
Trigger: GCTTGGCATTGCTCTCTGCCACACGTGGGCTTCCTC...ATGATTGTAGAAGTCCCTCCCGCCCTGGTTCTGCACGTTACAGTTAGCAGACGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp CAGAACCAGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCGTTTCTATAGGTTGGCGAGAGTaGGGAGATGCTCTCAGATGG +
Preference number: 4 (lower is better)
Translates to: QNQGGRDFYNHRGLACVSIGWRE*GDALRW
Trigger: CCATCTGAGAGCATCTCCCCACTCTCGCCAACCTAT...AGAAACGCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCTGGTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp CATCTTCTACAATGGCTGAGAGCACCACCTCCCTTTGGATATGGAGTTGGTTATCTAACCTGGGCCGCCTaGGGGCATCCCTGGGCTATG +
Preference number: 4 (lower is better)
Translates to: HLLQWLRAPPPFGYGVGYLTWAA*GHPWAM
Trigger: CATAGCCCAGGGATGCCCCCAGGCGGCCCAGGTTAG...ATAACCAACTCCATATCCAAAGGGAGGTGGTGCTCTCAGCCATTGTAGAAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp GCATTCAAGTGGGCCTTAGAGATGCTGGAGAAGAACAAATGGAATTGCTCGTCTCAGGGGGAGTTGGAGTaGACCCACCGGCCTGCACCA +
Preference number: 4 (lower is better)
Translates to: AFKWALEMLEKNKWNCSSQGELE*THRPAP
Trigger: TGGTGCAGGCCGGTGGGTCCACTCCAACTCCCCCTG...AGACGAGCAATTCCATTTGTTCTTCTCCAGCATCTCTAAGGCCCACTTGAATGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp AGGAAATGTAGGTGTTCAGATGTCGGTTGTTGCTGTCAGCCAACTGCTCTGCCAGTGGCCCAGAGAGGATaGAGCCACCACTCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: RKCRCSDVGCCCQPTALPVAQRG*SHHSSS
Trigger: AGAGCTGGAGTGGTGGCTCCATCCTCTCTGGGCCAC...TGGCAGAGCAGTTGGCTGACAGCAACAACCGACATCTGAACACCTACATTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp ACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTAATGGTTCTCGTGGCCCAGAGAGGATaGAGCCACCACTCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: TSVLRRRIQNEGPFLMVLVAQRG*SHHSSS
Trigger: AGAGCTGGAGTGGTGGCTCCATCCTCTCTGGGCCAC...GAGAACCATTAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp GCTCGTCTGCTAACTGTAACGTGCAGAACCAGGGCGGGAGGGACTTCTACAATCTTCCCCAAACCCTGGTaGCCCATAAACTCCACAAGC +
Preference number: 4 (lower is better)
Translates to: ARLLTVTCRTRAGGTSTIFPKPW*PINSTS
Trigger: GCTTGTGGAGTTTATGGGCCACCAGGGTTTGGGGAA...GATTGTAGAAGTCCCTCCCGCCCTGGTTCTGCACGTTACAGTTAGCAGACGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp TTAATGGTTCTCTGGCTTGGGTTGGACCAGAAATGCCAGGATCTCTTCACAGAGTCCCCTCCTCCCTCGTaGCACTGCCTGCATCTCCGT +
Preference number: 4 (lower is better)
Translates to: LMVLWLGLDQKCQDLFTESPPPS*HCLHLR
Trigger: ACGGAGATGCAGGCAGTGCCACGAGGGAGGAGGGGA...CTCTGTGAAGAGATCCTGGCATTTCTGGTCCAACCCAAGCCAGAGAACCATTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp TACGTCGCAGCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCCTACAAAGAGAAGGATaGGGAGGAAACAGTGCCCTA +
Preference number: 4 (lower is better)
Translates to: YVAAGTSVLRRRIQNEGPLQREG*GGNSAL
Trigger: TAGGGCACTGTTTCCTCCCCATCCTTCTCTTTGTAG...GGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGCTGCGACGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp AGGAAATGTAGGTGTTCAGATGTCGGTTGTTGCTGTCAGCCAACTGCTCTGCCAACATGGCCTCCTGGGTaGAGAGGTGGCACAGAGAGG +
Preference number: 4 (lower is better)
Translates to: RKCRCSDVGCCCQPTALPTWPPG*RGGTER
Trigger: CCTCTCTGTGCCACCTCTCCACCCAGGAGGCCATGT...TGGCAGAGCAGTTGGCTGACAGCAACAACCGACATCTGAACACCTACATTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp GAAGGCCCCTTCTTAATGGTTCTCTGGCTTGGGTTGGACCAGAAATGCCAGGATTGCTACATGGCCTCCTaGGTGGAGAGGTGGCACAGA +
Preference number: 4 (lower is better)
Translates to: EGPFLMVLWLGLDQKCQDCYMAS*VERWHR
Trigger: TCTGTGCCACCTCTCCACCCAGGAGGCCATGTAGCA...ATCCTGGCATTTCTGGTCCAACCCAAGCCAGAGAACCATTAAGAAGGGGCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp GGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTGAGCAAGGGATTATATGCTACATGGCCTCCTaGGTGGAGAGGTGGCACAGA +
Preference number: 4 (lower is better)
Translates to: GLACVSYLAGERGEQGIICYMAS*VERWHR
Trigger: TCTGTGCCACCTCTCCACCCAGGAGGCCATGTAGCA...TATAATCCCTTGCTCACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp CTCCCCTCCCACCTTCTTCAGCCTGAGAATAGTCCCTGGCACAAGCAGGTAATCGCACTCCCATCAACCTaGGTGTTATCCATAGCGGAG +
Preference number: 4 (lower is better)
Translates to: LPSHLLQPENSPWHKQVIALPST*VLSIAE
Trigger: CTCCGCTATGGATAACACCCAGGTTGATGGGAGTGC...GATTACCTGCTTGTGCCAGGGACTATTCTCAGGCTGAAGAAGGTGGGAGGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373946.7
ENST00000636016.2
CDS-3UTR CCA 90 bp GGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTGAGCAAGGGATTATACCTGCTGGACAGGTCTaGCTTCTGTGTCAGGGTCTG +
Preference number: 4 (lower is better)
Translates to: GLACVSYLAGERGEQGIIPAGQV*LLCQGL
Trigger: CAGACCCTGACACAGAAGCCAGACCTGTCCAGCAGG...TATAATCCCTTGCTCACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373950.6
CDS-3UTR CCA 90 bp TCGCAGCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTTTCACAGCCTGAATTaGGGGACACGGGCTCTAGTT +
Preference number: 4 (lower is better)
Translates to: SQLGRQCCVGESRMKAPSFHSLN*GTRALV
Trigger: AACTAGAGCCCGTGTCCCCCAATTCAGGCTGTGAAA...AGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGCTGCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS-3UTR CCA 90 bp TGCTGGAGAAGAACAAATGGAATTGCTCGTCTGCTAACTGTAACGTGCAGAACCCAGGGCAGCCCCTCCTaGGCTTTCCCTGATCCAGGG +
Preference number: 4 (lower is better)
Translates to: CWRRTNGIARLLTVTCRTQGSPS*AFPDPG
Trigger: CCCTGGATCAGGGAAAGCCCAGGAGGGGCTGCCCTG...GGTTCTGCACGTTACAGTTAGCAGACGAGCAATTCCATTTGTTCTTCTCCAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS-3UTR CCA 90 bp TCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTGCGTCCTTGCTCCTGCTaGAAGCAGCAGCAGAAACCC +
Preference number: 4 (lower is better)
Translates to: STIIVVWLAFLIWRGKGVRPCSC*KQQQKP
Trigger: GGGTTTCTGCTGCTGCTTCCAGCAGGAGCAAGGACG...CACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS-3UTR CCA 90 bp GCTCGTCTGCTAACTGTAACGTGCAGAACCAGGGCGGGAGGGACTTCTACAATCTTGGTCCTTGGGCTCTaGGCTGGCTTTCGAAAGATG +
Preference number: 4 (lower is better)
Translates to: ARLLTVTCRTRAGGTSTILVLGL*AGFRKM
Trigger: CATCTTTCGAAAGCCAGCCCAGAGCCCAAGGACCAA...GATTGTAGAAGTCCCTCCCGCCCTGGTTCTGCACGTTACAGTTAGCAGACGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS-3UTR CCA 90 bp GCAGCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTATGTTGGCTGCTAAGTTaGTGGAGCGCTTCTCTTCCC +
Preference number: 4 (lower is better)
Translates to: AAGTSVLRRRIQNEGPFLCWLLS*WSASLP
Trigger: GGGAAGAGAAGCGCTCCACCAACTTAGCAGCCAACA...TAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS-3UTR CCA 90 bp CCACCAGTTCTTCAATTTGTCTGCAAAGGAAATGTAGGTGTTCAGATGTCGGTTGAGGGCCCGAGGGGCTaGCAAATCTCAGGCGCCCCC +
Preference number: 4 (lower is better)
Translates to: PPVLQFVCKGNVGVQMSVEGPRG*QISGAP
Trigger: GGGGGCGCCTGAGATTTGCCAGCCCCTCGGGCCCTC...AACCGACATCTGAACACCTACATTTCCTTTGCAGACAAATTGAAGAACTGGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636016.2
3UTR CAA 72 bp AGAGTGGGGAGATGCTCTCAGATGGGCCAGCCATGGTaGAAATATAAAGCTGGCTCAGGTGGCTCCTCAGGT +
Preference number: 4 (lower is better)
Translates to: RVGRCSQMGQPW*KYKAGSGGSSG
Trigger: ACCTGAGGAGCCACCTGAGCCAGCTTTATATTTCAACCATGGCTGGCCCATCTGAGAGCATCTCCCCACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp TCCCACCTTCTTCAGCCTGAGAATAGTCCCTGGCACAAGCAGGTAATCAGTAAAGCCGGTCCCGGTAGATaGGCAGGCCATTGGCACAAA +
Preference number: 4 (lower is better)
Translates to: SHLLQPENSPWHKQVISKAGPGR*AGHWHK
Trigger: TTTGTGCCAATGGCCTGCTCATCTACCGGGACCGGC...TTTACTGATTACCTGCTTGTGCCAGGGACTATTCTCAGGCTGAAGAAGGTGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp GCATTCAAGTGGGCCTTAGAGATGCTGGAGAAGAACAAATGGAATTGCTCGTCTGCCAGGCAAAGCGGTTaGTTCTCAGCCGGTCCCGGT +
Preference number: 4 (lower is better)
Translates to: AFKWALEMLEKNKWNCSSARQSG*FSAGPG
Trigger: ACCGGGACCGGCTGAGAATCAACCGCTTTGCCTGGC...AGACGAGCAATTCCATTTGTTCTTCTCCAGCATCTCTAAGGCCCACTTGAATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp TGCTGGAGAAGAACAAATGGAATTGCTCGTCTGCTAACTGTAACGTGCAGAACCGCCAGGCAAAGCGGTTaGTTCTCAGCCGGTCCCGGT +
Preference number: 4 (lower is better)
Translates to: CWRRTNGIARLLTVTCRTARQSG*FSAGPG
Trigger: ACCGGGACCGGCTGAGAATCAACCGCTTTGCCTGGC...GGTTCTGCACGTTACAGTTAGCAGACGAGCAATTCCATTTGTTCTTCTCCAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp TTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGCAGCTGGGACGTCAGTGTCCCCAGGCCGGATCTTaGTATAGAAGTTACTCCTCT +
Preference number: 4 (lower is better)
Translates to: FPSQSLISDSTSQLGRQCPQAGS*YRSYSS
Trigger: AGAGGAGTAACTTCTATATCAAGATCCGGCCTGGGG...ACACTGACGTCCCAGCTGCGACGTACTGTCACTGATGAGAGACTGGGAAGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp GCAGCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTAAGCCGGAAGAATGTATaGTGCTCGATGCAGACCTTC +
Preference number: 4 (lower is better)
Translates to: AAGTSVLRRRIQNEGPFLSRKNV*CSMQTF
Trigger: GAAGGTCTGCATCGAGCATCATACATTCTTCCGGCT...TAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp ACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTAATGGTTCTCCTCGATCCCGGTGGATaGGTTTGCTGTTGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: TSVLRRRIQNEGPFLMVLLDPGG*VCCWAP
Trigger: AGGAGCCCAACAGCAAACTCATCCACCGGGATCGAG...GAGAACCATTAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp GCATTCAAGTGGGCCTTAGAGATGCTGGAGAAGAACAAATGGAATTGCTCGTCTTGGGGGCCCCCTTGTTaGGATCCCGGGAGAACAGCA +
Preference number: 4 (lower is better)
Translates to: AFKWALEMLEKNKWNCSSWGPPC*DPGRTA
Trigger: TGCTGTTCTCCCGGGATCTCAACAAGGGGGCCCCCA...AGACGAGCAATTCCATTTGTTCTTCTCCAGCATCTCTAAGGCCCACTTGAATGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp TGCTGGAGAAGAACAAATGGAATTGCTCGTCTGCTAACTGTAACGTGCAGAACCGGTGGTGGTGGAGGTTaGGAGGGTTTCCGCAGTGGC +
Preference number: 4 (lower is better)
Translates to: CWRRTNGIARLLTVTCRTGGGGG*EGFRSG
Trigger: GCCACTGCGGAAACCCTCTCAACCTCCACCACCACC...GGTTCTGCACGTTACAGTTAGCAGACGAGCAATTCCATTTGTTCTTCTCCAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp GAAGGTGTCTTGAACTGGCATTTTGGGGACGACATCTGTGTTGCTTCTTTCTTGGGTGGTGGTGGAGGTTaGGAGGGTTTCCGCAGTGGC +
Preference number: 4 (lower is better)
Translates to: EGVLNWHFGDDICVASFLGGGGG*EGFRSG
Trigger: GCCACTGCGGAAACCCTCTCAACCTCCACCACCACC...CAAGAAAGAAGCAACACAGATGTCGTCCCCAAAATGCCAGTTCAAGACACCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp TTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTGCCAGGGCCTGGTCTTaGTCGACATCTTCATCCCCA +
Preference number: 4 (lower is better)
Translates to: FYNHRGLACVSYLAGERGARAWS*STSSSP
Trigger: TGGGGATGAAGATGTCGATCAAGACCAGGCCCTGGC...ACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp TTCAGTGTGCTCAGGACTCCTGGTTCCTGCAAAGATGAGTTCCTAGACCGAAGTGCCAGGGCCTGGTCTTaGTCGACATCTTCATCCCCA +
Preference number: 4 (lower is better)
Translates to: FSVLRTPGSCKDEFLDRSARAWS*STSSSP
Trigger: TGGGGATGAAGATGTCGATCAAGACCAGGCCCTGGC...ACTTCGGTCTAGGAACTCATCTTTGCAGGAACCAGGAGTCCTGAGCACACTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp ACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTAATGGTTCTCGCCAGGGCCTGGTCTTaGTCGACATCTTCATCCCCA +
Preference number: 4 (lower is better)
Translates to: TSVLRRRIQNEGPFLMVLARAWS*STSSSP
Trigger: TGGGGATGAAGATGTCGATCAAGACCAGGCCCTGGC...GAGAACCATTAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp CTGCCAGCCCCAGCAGCAGTGCAAGGATGCGGTGTTTCCTGTATATATATCTATGCCAGGGCCTGGTCTTaGTCGACATCTTCATCCCCA +
Preference number: 4 (lower is better)
Translates to: LPAPAAVQGCGVSCIYIYARAWS*STSSSP
Trigger: TGGGGATGAAGATGTCGATCAAGACCAGGCCCTGGC...ATAGATATATATACAGGAAACACCGCATCCTTGCACTGCTGCTGGGGCTGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp CCCTGCCCCAAAGCCAGGTGCAAAATCCACAACAAGGATCCTCCCTCTGAGGTGTCGGAGAATCCAGAATaGAGGCCCCTTCTTAATGGT +
Preference number: 4 (lower is better)
Translates to: PCPKARCKIHNKDPPSEVSENPE*RPLLNG
Trigger: ACCATTAAGAAGGGGCCTTCATTCTGGATTCTCCGA...CACCTCAGAGGGAGGATCCTTGTTGTGGATTTTGCACCTGGCTTTGGGGCAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp CTGCCAGCCCCAGCAGCAGTGCAAGGATGCGGTGTTTCCTGTATATATATCTATCCAGTCTCTCATCAGTaGCAGTACGTCGCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: LPAPAAVQGCGVSCIYIYPVSHQ*QYVAAG
Trigger: CCCAGCTGCGACGTACTGTCACTGATGAGAGACTGG...ATAGATATATATACAGGAAACACCGCATCCTTGCACTGCTGCTGGGGCTGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp TTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGCAGCTGGGACGTCAGTGTTTCTCGGAAAATGGTTaGCTGTGCGTGTCTTGCTGC +
Preference number: 4 (lower is better)
Translates to: FPSQSLISDSTSQLGRQCFSENG*LCVSCC
Trigger: GCAGCAAGACACGCACAGTCAACCATTTTCCGAGAA...ACACTGACGTCCCAGCTGCGACGTACTGTCACTGATGAGAGACTGGGAAGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp CCCAGTCTCTCATCAGTGACAGTACGTCGCAGCTGGGACGTCAGTGTTGCGTCGAGCCGAGACAGAAAATaGCAGCAAGACATTGAGAGT +
Preference number: 4 (lower is better)
Translates to: PSLSSVTVRRSWDVSVASSRDRK*QQDIES
Trigger: ACTCTCAATGTCTTGCTGTCATTTTCTGTCTCGGCT...CGACGCAACACTGACGTCCCAGCTGCGACGTACTGTCACTGATGAGAGACTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp AGGAAATGTAGGTGTTCAGATGTCGGTTGTTGCTGTCAGCCAACTGCTCTGCCAAGGGAGTGGTTGCTATaGACTCCCTCCCCACTGAGG +
Preference number: 4 (lower is better)
Translates to: RKCRCSDVGCCCQPTALPREWLL*TPSPLR
Trigger: CCTCAGTGGGGAGGGAGTTCATAGCAACCACTCCCT...TGGCAGAGCAGTTGGCTGACAGCAACAACCGACATCTGAACACCTACATTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp GAGGCGGGAGAGAGGAAGGTAGGTTTTGCAGCCCAGTGTCAAGATCCAGAAAGTATATGGTCTCCGTGGTaGTGGAGGGAGTGGTTGCTA +
Preference number: 4 (lower is better)
Translates to: EAGERKVGFAAQCQDPESIWSPW*WREWLL
Trigger: TAGCAACCACTCCCTCCATCACCACGGAGACCATAT...ACTTTCTGGATCTTGACACTGGGCTGCAAAACCTACCTTCCTCTCTCCCGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp GCAGCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTAATCTTCTACAATGGCTaGGAGCACCACCTCCCTTTG +
Preference number: 4 (lower is better)
Translates to: AAGTSVLRRRIQNEGPFLIFYNG*EHHLPL
Trigger: CAAAGGGAGGTGGTGCTCTCAGCCATTGTAGAAGAT...TAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp GGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTGAGCAAGGGATTATACAGAGCTGGAGCCTATaGGCAACATCACCCGTCAGT +
Preference number: 4 (lower is better)
Translates to: GLACVSYLAGERGEQGIIQSWSL*ATSPVS
Trigger: ACTGACGGGTGATGTTGCTCATAGGCTCCAGCTCTG...TATAATCCCTTGCTCACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp TCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTGCAGAGCTGGAGCCTATaGGCAACATCACCCGTCAGT +
Preference number: 4 (lower is better)
Translates to: STIIVVWLAFLIWRGKGVQSWSL*ATSPVS
Trigger: ACTGACGGGTGATGTTGCTCATAGGCTCCAGCTCTG...CACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp CAGAACCAGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTGGGCCAGCCATGGTTaGAATATAAAGCTGGCTCAG +
Preference number: 4 (lower is better)
Translates to: QNQGGRDFYNHRGLACVSWASHG*NIKLAQ
Trigger: CTGAGCCAGCTTTATATTTCAACCATGGCTGGCCCA...AGAAACGCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCTGGTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp AATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTGAGCAAATTCTGCTGCCCCGCTaGACTTCCCATTTGCCCAGA +
Preference number: 4 (lower is better)
Translates to: NHRGLACVSYLAGERGEQILLPR*TSHLPR
Trigger: TCTGGGCAAATGGGAAGTTCAGCGGGGCAGCAGAAT...TTGCTCACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp CATCTTCTACAATGGCTGAGAGCACCACCTCCCTTTGGATATGGAGTTGGTTATTACAGCACGGAGCACTaGGGTGGGGGAGCATGGGGA +
Preference number: 4 (lower is better)
Translates to: HLLQWLRAPPPFGYGVGYYSTEH*GGGAWG
Trigger: TCCCCATGCTCCCCCACCTCAGTGCTCCGTGCTGTA...ATAACCAACTCCATATCCAAAGGGAGGTGGTGCTCTCAGCCATTGTAGAAGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp GCATTCAAGTGGGCCTTAGAGATGCTGGAGAAGAACAAATGGAATTGCTCGTCTTACAGCACGGAGCACTaGGGTGGGGGAGCATGGGGA +
Preference number: 4 (lower is better)
Translates to: AFKWALEMLEKNKWNCSSYSTEH*GGGAWG
Trigger: TCCCCATGCTCCCCCACCTCAGTGCTCCGTGCTGTA...AGACGAGCAATTCCATTTGTTCTTCTCCAGCATCTCTAAGGCCCACTTGAATGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp TGCTGGAGAAGAACAAATGGAATTGCTCGTCTGCTAACTGTAACGTGCAGAACCATGTCAGGGAAAGGCTaGGCAGGCTCCCTCCCGGGA +
Preference number: 4 (lower is better)
Translates to: CWRRTNGIARLLTVTCRTMSGKG*AGSLPG
Trigger: TCCCGGGAGGGAGCCTGCTCAGCCTTTCCCTGACAT...GGTTCTGCACGTTACAGTTAGCAGACGAGCAATTCCATTTGTTCTTCTCCAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373946.7
CDS-3UTR TCA 90 bp TTCAGTGTGCTCAGGACTCCTGGTTCCTGCAAAGATGAGTTCCTAGACCGAAGTCTCCGGCTGACCATCTaGCATGCAGCGGTTCCTGAT +
Preference number: 4 (lower is better)
Translates to: FSVLRTPGSCKDEFLDRSLRLTI*HAAVPD
Trigger: ATCAGGAACCGCTGCATGTCAGATGGTCAGCCGGAG...ACTTCGGTCTAGGAACTCATCTTTGCAGGAACCAGGAGTCCTGAGCACACTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS-3UTR TCA 90 bp CTTTTCTTTTTCTCATTTCAAAGGAGAGTCATCTGCAGTGGCCCTCAGAAGGACCTCCGAAGGCTCCCCTaGCCCATGGGAGGTTGGGCT +
Preference number: 4 (lower is better)
Translates to: LFFFSFQRRVICSGPQKDLRRLP*PMGGWA
Trigger: AGCCCAACCTCCCATGGGTCAGGGGAGCCTTCGGAG...GTCCTTCTGAGGGCCACTGCAGATGACTCTCCTTTGAAATGAGAAAAAGAAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS-3UTR TCA 90 bp TCTTCAATTTGTCTGCAAAGGAAATGTAGGTGTTCAGATGTCGGTTGTTGCTGTCTCAGCCCTGCTCTCTaGGGGCCCGAGGGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: SSICLQRKCRCSDVGCCCLSPAL*GPEGLA
Trigger: TGCCAGCCCCTCGGGCCCTCAGAGAGCAGGGCTGAG...ACAGCAACAACCGACATCTGAACACCTACATTTCCTTTGCAGACAAATTGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS-3UTR GCA 90 bp GCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTAATGGGGCTACTCCGGATCTaGTTCTTGATCTCCTTGGAG +
Preference number: 4 (lower is better)
Translates to: AGTSVLRRRIQNEGPFLMGLLRI*FLISLE
Trigger: CTCCAAGGAGATCAAGAAGCAGATCCGGAGTAGCCC...CATTAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp TGCTGGAGAAGAACAAATGGAATTGCTCGTCTGCTAACTGTAACGTGCAGAACCGCCCGTGATGATGTCTaGCCGCAGCTGCAGGCACAG +
Preference number: 4 (lower is better)
Translates to: CWRRTNGIARLLTVTCRTARDDV*PQLQAQ
Trigger: CTGTGCCTGCAGCTGCGGGCAGACATCATCACGGGC...GGTTCTGCACGTTACAGTTAGCAGACGAGCAATTCCATTTGTTCTTCTCCAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp TTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTGAGCCCAGTAGGGCATaGGTGACAAAGGAGCATGGC +
Preference number: 4 (lower is better)
Translates to: FYNHRGLACVSYLAGERGEPSRA*VTKEHG
Trigger: GCCATGCTCCTTTGTCACGCATGCCCTACTGGGCTC...ACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp CTGCCAGCCCCAGCAGCAGTGCAAGGATGCGGTGTTTCCTGTATATATATCTATACGCTCAAAGAAGGGTaGAGGCCGGTCAATGAGGGC +
Preference number: 4 (lower is better)
Translates to: LPAPAAVQGCGVSCIYIYTLKEG*RPVNEG
Trigger: GCCCTCATTGACCGGCCTGCACCCTTCTTTGAGCGT...ATAGATATATATACAGGAAACACCGCATCCTTGCACTGCTGCTGGGGCTGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp AACCAGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATCTGCTCCATCAAGGCTaGGGGACATGGTGTACCGTT +
Preference number: 4 (lower is better)
Translates to: NQGGRDFYNHRGLACVSYLLHQG*GTWCTV
Trigger: AACGGTACACCATGTCCCGCAGCCTTGATGGAGCAG...ATAAGAAACGCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCTGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp TTAATGGTTCTCTGGCTTGGGTTGGACCAGAAATGCCAGGATCTCTTCACAGAGTGGGCGGGAGAACTCTaGTCCATCAAGGCTGCGGGA +
Preference number: 4 (lower is better)
Translates to: LMVLWLGLDQKCQDLFTEWAGEL*SIKAAG
Trigger: TCCCGCAGCCTTGATGGAGCAGAGTTCTCCCGCCCA...CTCTGTGAAGAGATCCTGGCATTTCTGGTCCAACCCAAGCCAGAGAACCATTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp ATATATATGCTTTTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGCAGCTGTCAGCCTCTGACCGTTaGCCCCCAGACTCGCCATCC +
Preference number: 4 (lower is better)
Translates to: IYMLFPSQSLISDSTSQLSASDR*PPDSPS
Trigger: GGATGGCGAGTCTGGGGGGCAACGGTCAGAGGCTGA...CAGCTGCGACGTACTGTCACTGATGAGAGACTGGGAAGGGAAAAGCATATATAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp ACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTAATGGTTCTCGCCCTCCCTCAGCCCTaGTCTCTCATTGGCTTTCTC +
Preference number: 4 (lower is better)
Translates to: TSVLRRRIQNEGPFLMVLALPQP*SLIGFL
Trigger: GAGAAAGCCAATGAGAGAGCAGGGCTGAGGGAGGGC...GAGAACCATTAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
CDS-3UTR GCA 90 bp TTAATGGTTCTCTGGCTTGGGTTGGACCAGAAATGCCAGGATCTCTTCACAGAGTGGGATCATGGCAGCTaGCCCCTTCCCGGACTTGAG +
Preference number: 4 (lower is better)
Translates to: LMVLWLGLDQKCQDLFTEWDHGS*PLPGLE
Trigger: CTCAAGTCCGGGAAGGGGGCAGCTGCCATGATCCCA...CTCTGTGAAGAGATCCTGGCATTTCTGGTCCAACCCAAGCCAGAGAACCATTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp CCAGCCCCAGCAGCAGTGCAAGGATGCGGTGTTTCCTGTATATATATCTATATCTGGGATCATGGCAGCTaGCCCCTTCCCGGACTTGAG +
Preference number: 4 (lower is better)
Translates to: PAPAAVQGCGVSCIYIYIWDHGS*PLPGLE
Trigger: CTCAAGTCCGGGAAGGGGGCAGCTGCCATGATCCCA...GATATAGATATATATACAGGAAACACCGCATCCTTGCACTGCTGCTGGGGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp AACGTGCAGAACCAGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCAGCATATCAGGATGCTaGAGTTTGGCCTCCTTGATG +
Preference number: 4 (lower is better)
Translates to: NVQNQGGRDFYNHRGLACSISGC*SLASLM
Trigger: CATCAAGGAGGCCAAACTGCAGCATCCTGATATGCT...GCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCTGGTTCTGCACGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp TTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGCAGCTGGGACGTCAGTGTACCAGCATATCAGGATaGTGCAGTTTGGCCTCCTTG +
Preference number: 4 (lower is better)
Translates to: FPSQSLISDSTSQLGRQCTSISG*CSLASL
Trigger: CAAGGAGGCCAAACTGCAGCATCCTGATATGCTGGT...ACACTGACGTCCCAGCTGCGACGTACTGTCACTGATGAGAGACTGGGAAGGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp GCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTAATGCTGGGACGTCAGTGTTaGGTCGGAGAATCCAGAATG +
Preference number: 4 (lower is better)
Translates to: AGTSVLRRRIQNEGPFLMLGRQC*VGESRM
Trigger: CATTCTGGATTCTCCGACGCAACACTGACGTCCCAG...CATTAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp GAGGCGGGAGAGAGGAAGGTAGGTTTTGCAGCCCAGTGTCAAGATCCAGAAAGTCTGGGACGTCAGTGTTaGGTCGGAGAATCCAGAATG +
Preference number: 4 (lower is better)
Translates to: EAGERKVGFAAQCQDPESLGRQC*VGESRM
Trigger: CATTCTGGATTCTCCGACGCAACACTGACGTCCCAG...ACTTTCTGGATCTTGACACTGGGCTGCAAAACCTACCTTCCTCTCTCCCGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp CTGCCAGCCCCAGCAGCAGTGCAAGGATGCGGTGTTTCCTGTATATATATCTATCAGCCCCAGCAGCAGTaGAAGGATGCGGTGTTTCCT +
Preference number: 4 (lower is better)
Translates to: LPAPAAVQGCGVSCIYIYQPQQQ*KDAVFP
Trigger: AGGAAACACCGCATCCTTGCACTGCTGCTGGGGCTG...ATAGATATATATACAGGAAACACCGCATCCTTGCACTGCTGCTGGGGCTGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp TCATCAGTGACAGTACGTCGCAGCTGGGACGTCAGTGTTGCGTCGGAGAATCCATCAGATGTCGGTTGTTaGTGTCAGCCAACTGCTCTG +
Preference number: 4 (lower is better)
Translates to: SSVTVRRSWDVSVASENPSDVGC*CQPTAL
Trigger: CAGAGCAGTTGGCTGACAGCAACAACCGACATCTGA...TGGATTCTCCGACGCAACACTGACGTCCCAGCTGCGACGTACTGTCACTGATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp ACAAATGGAATTGCTCGTCTGCTAACTGTAACGTGCAGAACCAGGGCGGGAGGGCATCGTGGTCTGGCTTaGGTTTCTTATTTGGCGGGG +
Preference number: 4 (lower is better)
Translates to: TNGIARLLTVTCRTRAGGHRGLA*VSYLAG
Trigger: CCCCGCCAAATAAGAAACGCAAGCCAGACCACGATG...CCCTCCCGCCCTGGTTCTGCACGTTACAGTTAGCAGACGAGCAATTCCATTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp ACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTAATGGTTCTCCTGCTAACTGTAACGTaGAGAACCAGGGCGGGAGGG +
Preference number: 4 (lower is better)
Translates to: TSVLRRRIQNEGPFLMVLLLTVT*RTRAGG
Trigger: CCCTCCCGCCCTGGTTCTGCACGTTACAGTTAGCAG...GAGAACCATTAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp ACAAATGGAATTGCTCGTCTGCTAACTGTAACGTGCAGAACCAGGGCGGGAGGGCAAAGGAGAGTCATCTaGAGTGGCCCTCAGAAGGAC +
Preference number: 4 (lower is better)
Translates to: TNGIARLLTVTCRTRAGGQRRVI*SGPQKD
Trigger: GTCCTTCTGAGGGCCACTGCAGATGACTCTCCTTTG...CCCTCCCGCCCTGGTTCTGCACGTTACAGTTAGCAGACGAGCAATTCCATTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp CCCTGCCCCAAAGCCAGGTGCAAAATCCACAACAAGGATCCTCCCTCTGAGGTGTTGTCTAAGAACTCCTaGTTGTGTCTCGGCGTGGTT +
Preference number: 4 (lower is better)
Translates to: PCPKARCKIHNKDPPSEVLSKNS*LCLGVV
Trigger: AACCACGCCGAGACACAAGCAGGAGTTCTTAGACAA...CACCTCAGAGGGAGGATCCTTGTTGTGGATTTTGCACCTGGCTTTGGGGCAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000636016.2
CDS-3UTR GCA 90 bp AAATGTAGGTGTTCAGATGTCGGTTGTTGCTGTCAGCCAACTGCTCTGCCAGCCGATGGAGGGAGTGGTTaGTATGAACTCCCTCCCCAC +
Preference number: 4 (lower is better)
Translates to: KCRCSDVGCCCQPTALPADGGSG*YELPPH
Trigger: GTGGGGAGGGAGTTCATAGCAACCACTCCCTCCATC...GGCTGGCAGAGCAGTTGGCTGACAGCAACAACCGACATCTGAACACCTACATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp GGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTGAGCAAGGGATTATAGATGGAGGGAGTGGTTaGTATGAACTCCCTCCCCAC +
Preference number: 4 (lower is better)
Translates to: GLACVSYLAGERGEQGIIDGGSG*YELPPH
Trigger: GTGGGGAGGGAGTTCATAGCAACCACTCCCTCCATC...TATAATCCCTTGCTCACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp TACACTGAACCCGTCAGCCCCTACTGTGAGCCAACCCACACCCAGAGTCCAGGTGACAGGGGAGGGCTTTaGAAATGCAGTTTTGATCTT +
Preference number: 4 (lower is better)
Translates to: YTEPVSPYCEPTHTQSPGDRGGL*KCSFDL
Trigger: AAGATCAAAACTGCATTTGCAAAGCCCTCCCCTGTC...ACCTGGACTCTGGGTGTGGGTTGGCTCACAGTAGGGGCTGACGGGTTCAGTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp TTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGCAGCTGGGACGTCAGTGTCAAGCCAAGGTCTTATaGAGAGCTGGAGCCTATGAG +
Preference number: 4 (lower is better)
Translates to: FPSQSLISDSTSQLGRQCQAKVL*RAGAYE
Trigger: CTCATAGGCTCCAGCTCTGCATAAGACCTTGGCTTG...ACACTGACGTCCCAGCTGCGACGTACTGTCACTGATGAGAGACTGGGAAGGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp CCCTGCCCCAAAGCCAGGTGCAAAATCCACAACAAGGATCCTCCCTCTGAGGTGCTGAGAAATTCGCAGTaGAGTGGGACATTTTCCCTC +
Preference number: 4 (lower is better)
Translates to: PCPKARCKIHNKDPPSEVLRNSQ*SGTFSL
Trigger: GAGGGAAAATGTCCCACTGCACTGCGAATTTCTCAG...CACCTCAGAGGGAGGATCCTTGTTGTGGATTTTGCACCTGGCTTTGGGGCAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp TTAATGGTTCTCTGGCTTGGGTTGGACCAGAAATGCCAGGATCTCTTCACAGAGGGCATCCCTGGGCTATaGCCCGATAGGTTGGCGAGA +
Preference number: 4 (lower is better)
Translates to: LMVLWLGLDQKCQDLFTEGIPGL*PDRLAR
Trigger: TCTCGCCAACCTATCGGGGCATAGCCCAGGGATGCC...CTCTGTGAAGAGATCCTGGCATTTCTGGTCCAACCCAAGCCAGAGAACCATTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp AGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGGCTATTCTGATTTCCTaGCCTGCCTCAGGCCAGCAC +
Preference number: 4 (lower is better)
Translates to: RAGGTSTIIVVWLAFLIWAILIS*PASGQH
Trigger: GTGCTGGCCTGAGGCAGGGCAGGAAATCAGAATAGC...CCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp GCAGCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTAGTATGGAAAGTGTGCTaGTACACTCAGGGGGAGTTG +
Preference number: 4 (lower is better)
Translates to: AAGTSVLRRRIQNEGPFLVWKVC*YTQGEL
Trigger: CAACTCCCCCTGAGTGTAGCAGCACACTTTCCATAC...TAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp CTCCCCTCCCACCTTCTTCAGCCTGAGAATAGTCCCTGGCACAAGCAGGTAATCGTATGGAAAGTGTGCTaGTACACTCAGGGGGAGTTG +
Preference number: 4 (lower is better)
Translates to: LPSHLLQPENSPWHKQVIVWKVC*YTQGEL
Trigger: CAACTCCCCCTGAGTGTAGCAGCACACTTTCCATAC...GATTACCTGCTTGTGCCAGGGACTATTCTCAGGCTGAAGAAGGTGGGAGGGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp TCCCACCTTCTTCAGCCTGAGAATAGTCCCTGGCACAAGCAGGTAATCAGTAAACCTCCCTCGTGGCACTaGCTGCATCTCCGTAGAAGG +
Preference number: 4 (lower is better)
Translates to: SHLLQPENSPWHKQVISKPPSWH*LHLRRR
Trigger: CCTTCTACGGAGATGCAGGCAGTGCCACGAGGGAGG...TTTACTGATTACCTGCTTGTGCCAGGGACTATTCTCAGGCTGAAGAAGGTGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp CTCCCCTCCCACCTTCTTCAGCCTGAGAATAGTCCCTGGCACAAGCAGGTAATCGGACTTTTTCCACTATaGTACATGGCCTCCTGGGTG +
Preference number: 4 (lower is better)
Translates to: LPSHLLQPENSPWHKQVIGLFPL*YMASWV
Trigger: CACCCAGGAGGCCATGTAGCATAGTGGAAAAAGTCC...GATTACCTGCTTGTGCCAGGGACTATTCTCAGGCTGAAGAAGGTGGGAGGGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp TTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTCTCGAGGAGCTTTTCTaGCAATGTGCGGCCGGAAGC +
Preference number: 4 (lower is better)
Translates to: FYNHRGLACVSYLAGERGLEELF*QCAAGS
Trigger: GCTTCCGGCCGCACATTGGCAGAAAAGCTCCTCGAG...ACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS-3UTR CCA 90 bp GCATTCAAGTGGGCCTTAGAGATGCTGGAGAAGAACAAATGGAATTGCTCGTCTGGGCCTTGCTGGGCGTaGTCCTCTCCGAAAGGCCAT +
Preference number: 4 (lower is better)
Translates to: AFKWALEMLEKNKWNCSSGPCWA*SSPKGH
Trigger: ATGGCCTTTCGGAGAGGACCACGCCCAGCAAGGCCC...AGACGAGCAATTCCATTTGTTCTTCTCCAGCATCTCTAAGGCCCACTTGAATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp TTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGCAGCTGGGACGTCAGTGTTTCTTGGCAATCTTCTaGGGCGATTTCTGGGCCTTG +
Preference number: 4 (lower is better)
Translates to: FPSQSLISDSTSQLGRQCFLAIF*GDFWAL
Trigger: CAAGGCCCAGAAATCGCCCCAGAAGATTGCCAAGAA...ACACTGACGTCCCAGCTGCGACGTACTGTCACTGATGAGAGACTGGGAAGGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp TTTCTTTTTCTCATTTCAAAGGAGAGTCATCTGCAGTGGCCCTCAGAAGGACCATCCAGCTCCCGGGTCTaGTTAGGGGCGAAGCGGAGC +
Preference number: 4 (lower is better)
Translates to: FLFLISKESHLQWPSEGPSSSRV*LGAKRS
Trigger: GCTCCGCTTCGCCCCTAACCAGACCCGGGAGCTGGA...TGGTCCTTCTGAGGGCCACTGCAGATGACTCTCCTTTGAAATGAGAAAAAGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp CCGCCCTCAGGGACTTTTTCCACTATGCTACATGGCCTCCTGGGTGGAGAGGTGGGTCTACTCCGTACATaGAAAGCTTCTTGGCATTCT +
Preference number: 4 (lower is better)
Translates to: PPSGTFSTMLHGLLGGEVGLLRT*KASWHS
Trigger: AGAATGCCAAGAAGCTTTCCATGTACGGAGTAGACC...CACCTCTCCACCCAGGAGGCCATGTAGCATAGTGGAAAAAGTCCCTGAGGGCGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp GGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTGAGCAAGGGATTATATGCCCTCAGAGTCCTTaGCATGGTGCAGGTCTACTC +
Preference number: 4 (lower is better)
Translates to: GLACVSYLAGERGEQGIICPQSP*HGAGLL
Trigger: GAGTAGACCTGCACCATGCCAAGGACTCTGAGGGCA...TATAATCCCTTGCTCACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp AGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGTGCCCTCAGAGTCCTTaGCATGGTGCAGGTCTACTC +
Preference number: 4 (lower is better)
Translates to: RAGGTSTIIVVWLAFLIWCPQSP*HGAGLL
Trigger: GAGTAGACCTGCACCATGCCAAGGACTCTGAGGGCA...CCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp GAGGCGGGAGAGAGGAAGGTAGGTTTTGCAGCCCAGTGTCAAGATCCAGAAAGTCTCTTGGCTGACCGGTaGTTTGGGAGCTTAAAGCCA +
Preference number: 4 (lower is better)
Translates to: EAGERKVGFAAQCQDPESLLADR*FGSLKP
Trigger: TGGCTTTAAGCTCCCAAACCACCGGTCAGCCAAGAG...ACTTTCTGGATCTTGACACTGGGCTGCAAAACCTACCTTCCTCTCTCCCGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp GGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTGAGCAAGGGATTATACACTGTACCGGAACTTaGAGCCCATCACCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: GLACVSYLAGERGEQGIIHCTGT*SPSPGS
Trigger: GCTTCCTGGTGATGGGCTCCAAGTTCCGGTACAGTG...TATAATCCCTTGCTCACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp AGGAAATGTAGGTGTTCAGATGTCGGTTGTTGCTGTCAGCCAACTGCTCTGCCATCAGGCCCTGCATCATaGTTCTCGCTGACCGAGGCT +
Preference number: 4 (lower is better)
Translates to: RKCRCSDVGCCCQPTALPSGPAS*FSLTEA
Trigger: AGCCTCGGTCAGCGAGAACCATGATGCAGGGCCTGA...TGGCAGAGCAGTTGGCTGACAGCAACAACCGACATCTGAACACCTACATTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp TCGTCTGCTAACTGTAACGTGCAGAACCAGGGCGGGAGGGACTTCTACAATCATCAGTCTCGATCCCGGTaGATGAGTTTGCTGTTGGGC +
Preference number: 4 (lower is better)
Translates to: SSANCNVQNQGGRDFYNHQSRSR*MSLLLG
Trigger: GCCCAACAGCAAACTCATCCACCGGGATCGAGACTG...ATGATTGTAGAAGTCCCTCCCGCCCTGGTTCTGCACGTTACAGTTAGCAGACGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp AGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCAGTCTCGATCCCGGTaGATGAGTTTGCTGTTGGGC +
Preference number: 4 (lower is better)
Translates to: RAGGTSTIIVVWLAFLIWQSRSR*MSLLLG
Trigger: GCCCAACAGCAAACTCATCCACCGGGATCGAGACTG...CCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp ACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTAATGGTTCTCTCCCTCTCCTGGTCCTaGTCCTCATCGCCTGTGTCA +
Preference number: 4 (lower is better)
Translates to: TSVLRRRIQNEGPFLMVLSLSWS*SSSPVS
Trigger: TGACACAGGCGATGAGGACCAGGACCAGGAGAGGGA...GAGAACCATTAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp AATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTGAGCAACGCTCAATGGCCAGGTaGTTGTCCTTCAGGAACACC +
Preference number: 4 (lower is better)
Translates to: NHRGLACVSYLAGERGEQRSMAR*LSFRNT
Trigger: GGTGTTCCTGAAGGACAACCACCTGGCCATTGAGCG...TTGCTCACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp GAAGGCCCCTTCTTAATGGTTCTCTGGCTTGGGTTGGACCAGAAATGCCAGGATCGCTCAATGGCCAGGTaGTTGTCCTTCAGGAACACC +
Preference number: 4 (lower is better)
Translates to: EGPFLMVLWLGLDQKCQDRSMAR*LSFRNT
Trigger: GGTGTTCCTGAAGGACAACCACCTGGCCATTGAGCG...ATCCTGGCATTTCTGGTCCAACCCAAGCCAGAGAACCATTAAGAAGGGGCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp TCGTCTGCTAACTGTAACGTGCAGAACCAGGGCGGGAGGGACTTCTACAATCATCGCTCAATGGCCAGGTaGTTGTCCTTCAGGAACACC +
Preference number: 4 (lower is better)
Translates to: SSANCNVQNQGGRDFYNHRSMAR*LSFRNT
Trigger: GGTGTTCCTGAAGGACAACCACCTGGCCATTGAGCG...ATGATTGTAGAAGTCCCTCCCGCCCTGGTTCTGCACGTTACAGTTAGCAGACGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp GAGGCGGGAGAGAGGAAGGTAGGTTTTGCAGCCCAGTGTCAAGATCCAGAAAGTAGCACTTGCGCTCAATaGCCAGGTGGTTGTCCTTCA +
Preference number: 4 (lower is better)
Translates to: EAGERKVGFAAQCQDPESSTCAQ*PGGCPS
Trigger: TGAAGGACAACCACCTGGCCATTGAGCGCAAGTGCT...ACTTTCTGGATCTTGACACTGGGCTGCAAAACCTACCTTCCTCTCTCCCGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp TTAATGGTTCTCTGGCTTGGGTTGGACCAGAAATGCCAGGATCTCTTCACAGAGCCAGACTCATCATCCTaGCTGGGGGCCCCCTTGTTG +
Preference number: 4 (lower is better)
Translates to: LMVLWLGLDQKCQDLFTEPDSSS*LGAPLL
Trigger: CAACAAGGGGGCCCCCAGCCAGGATGATGAGTCTGG...CTCTGTGAAGAGATCCTGGCATTTCTGGTCCAACCCAAGCCAGAGAACCATTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp ACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTAATGGTTCTCTTCACGGGCTCAAACTaGGGCATATCCGGGGTGGAG +
Preference number: 4 (lower is better)
Translates to: TSVLRRRIQNEGPFLMVLFTGSN*GISGVE
Trigger: CTCCACCCCGGATATGCCCCAGTTTGAGCCCGTGAA...GAGAACCATTAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp AGGTGTATGTCATCACTGACAAGCCAAAGGGACGCATCTAACCTGGGCCGCCTGACAGTTTTGGTGACATaGGTGGTGGTGGAGGTTGAG +
Preference number: 4 (lower is better)
Translates to: RCMSSLTSQRDASNLGRLTVLVT*VVVEVE
Trigger: CTCAACCTCCACCACCACCCATGTCACCAAAACTGT...CAGGCGGCCCAGGTTAGATGCGTCCCTTTGGCTTGTCAGTGATGACATACACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp AAGACTGAAAACCAAGGCAAGCCCCGTAGGGAGATAAGGACTAAGCCAGGGACCCTTGTCCCTCTCCTCTaGGGATGGGTCTGTTTCTCT +
Preference number: 4 (lower is better)
Translates to: KTENQGKPRREIRTKPGTLVPLL*GWVCFS
Trigger: AGAGAAACAGACCCATCCCCAGAGGAGAGGGACAAG...GGTCCCTGGCTTAGTCCTTATCTCCCTACGGGGCTTGCCTTGGTTTTCAGTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp CCCTGCCCCAAAGCCAGGTGCAAAATCCACAACAAGGATCCTCCCTCTGAGGTGAATGGTTCTCTGGCTTaGGTTGGACCAGAAATGCCA +
Preference number: 4 (lower is better)
Translates to: PCPKARCKIHNKDPPSEVNGSLA*VGPEMP
Trigger: TGGCATTTCTGGTCCAACCCAAGCCAGAGAACCATT...CACCTCAGAGGGAGGATCCTTGTTGTGGATTTTGCACCTGGCTTTGGGGCAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp AACGTGCAGAACCAGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCAATGGTTCTCTGGCTTaGGTTGGACCAGAAATGCCA +
Preference number: 4 (lower is better)
Translates to: NVQNQGGRDFYNHRGLACNGSLA*VGPEMP
Trigger: TGGCATTTCTGGTCCAACCCAAGCCAGAGAACCATT...GCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCTGGTTCTGCACGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp TTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTACAGTACGTCGCAGCTaGGACGTCAGTGTTGCGTCG +
Preference number: 4 (lower is better)
Translates to: FYNHRGLACVSYLAGERGTVRRS*DVSVAS
Trigger: CGACGCAACACTGACGTCCCAGCTGCGACGTACTGT...ACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp TTCAGTGTGCTCAGGACTCCTGGTTCCTGCAAAGATGAGTTCCTAGACCGAAGTACAGTACGTCGCAGCTaGGACGTCAGTGTTGCGTCG +
Preference number: 4 (lower is better)
Translates to: FSVLRTPGSCKDEFLDRSTVRRS*DVSVAS
Trigger: CGACGCAACACTGACGTCCCAGCTGCGACGTACTGT...ACTTCGGTCTAGGAACTCATCTTTGCAGGAACCAGGAGTCCTGAGCACACTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp TACGTCGCAGCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCCTACTTCCCTTCCTGTaGCTTCGTTTTCTGTTCTTG +
Preference number: 4 (lower is better)
Translates to: YVAAGTSVLRRRIQNEGPLLPFL*LRFLFL
Trigger: CAAGAACAGAAAACGAAGCCACAGGAAGGGAAGTAG...GGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGCTGCGACGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp CCTATGAGCAACATCACCCGTCAGTCTCAGCTTTGTCCTGGGACAGGGGAGGGCCTACTTCCCTTCCTGTaGCTTCGTTTTCTGTTCTTG +
Preference number: 4 (lower is better)
Translates to: PMSNITRQSQLCPGTGEGLLPFL*LRFLFL
Trigger: CAAGAACAGAAAACGAAGCCACAGGAAGGGAAGTAG...GCCCTCCCCTGTCCCAGGACAAAGCTGAGACTGACGGGTGATGTTGCTCATAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp CTGCTCTGCCAGCCCCAGCAGCAGTGCAAGGATGCGGTGTTTCCTGTATATATACCAGGTCTCCTTAGCTaGGCCAGTTCAGTGAGATCT +
Preference number: 4 (lower is better)
Translates to: LLCQPQQQCKDAVFPVYIPGLLS*ASSVRS
Trigger: AGATCTCACTGAACTGGCCCAGCTAAGGAGACCTGG...TATATATACAGGAAACACCGCATCCTTGCACTGCTGCTGGGGCTGGCAGAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp TCGCAGCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTCTTGAACTGGCATTTTaGGGACGACATCTGTGTTGC +
Preference number: 4 (lower is better)
Translates to: SQLGRQCCVGESRMKAPSLELAF*GRHLCC
Trigger: GCAACACAGATGTCGTCCCCAAAATGCCAGTTCAAG...AGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGCTGCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp CCCTGCCCCAAAGCCAGGTGCAAAATCCACAACAAGGATCCTCCCTCTGAGGTGGAAGGTGTCTTGAACTaGCATTTTGGGGACGACATC +
Preference number: 4 (lower is better)
Translates to: PCPKARCKIHNKDPPSEVEGVLN*HFGDDI
Trigger: GATGTCGTCCCCAAAATGCCAGTTCAAGACACCTTC...CACCTCAGAGGGAGGATCCTTGTTGTGGATTTTGCACCTGGCTTTGGGGCAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp TTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTAGCAGAGTCCCAGACTaGGACCCAGTACCTGAGCAC +
Preference number: 4 (lower is better)
Translates to: FYNHRGLACVSYLAGERGSRVPD*DPVPEH
Trigger: GTGCTCAGGTACTGGGTCCCAGTCTGGGACTCTGCT...ACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp GCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTAATGCACCATCTTCTACAATaGCTGAGAGCACCACCTCCC +
Preference number: 4 (lower is better)
Translates to: AGTSVLRRRIQNEGPFLMHHLLQ*LRAPPP
Trigger: GGGAGGTGGTGCTCTCAGCCATTGTAGAAGATGGTG...CATTAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp TTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTGAGGAAGCCCACGTGTaGCAGAGAGCAATGCCAAGC +
Preference number: 4 (lower is better)
Translates to: FYNHRGLACVSYLAGERGEEAHV*QRAMPS
Trigger: GCTTGGCATTGCTCTCTGCCACACGTGGGCTTCCTC...ACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp ACAAATGGAATTGCTCGTCTGCTAACTGTAACGTGCAGAACCAGGGCGGGAGGGATAGGTTGGCGAGAGTaGGGAGATGCTCTCAGATGG +
Preference number: 4 (lower is better)
Translates to: TNGIARLLTVTCRTRAGGIGWRE*GDALRW
Trigger: CCATCTGAGAGCATCTCCCCACTCTCGCCAACCTAT...CCCTCCCGCCCTGGTTCTGCACGTTACAGTTAGCAGACGAGCAATTCCATTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp GGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTGAGCAAGGGATTATATATGCCCCGATAGGTTaGCGAGAGTGGGGAGATGCT +
Preference number: 4 (lower is better)
Translates to: GLACVSYLAGERGEQGIIYAPIG*REWGDA
Trigger: AGCATCTCCCCACTCTCGCCAACCTATCGGGGCATA...TATAATCCCTTGCTCACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp CCCAGCAGCAGTGCAAGGATGCGGTGTTTCCTGTATATATATCTATATCTCTATGGGACGCATCTAACCTaGGCCGCCTGGGGGCATCCC +
Preference number: 4 (lower is better)
Translates to: PSSSARMRCFLYIYLYLYGTHLT*AAWGHP
Trigger: GGGATGCCCCCAGGCGGCCCAGGTTAGATGCGTCCC...ATAGAGATATAGATATATATACAGGAAACACCGCATCCTTGCACTGCTGCTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp CCAGGATGGTCACCCAGAACTCCTAACCGCCCTCAGGGACTTTTTCCACTATGCGATTTCCCCAAACCCTaGTGGCCCATAAACTCCACA +
Preference number: 4 (lower is better)
Translates to: PGWSPRTPNRPQGLFPLCDFPKP*WPINST
Trigger: TGTGGAGTTTATGGGCCACCAGGGTTTGGGGAAATC...GCATAGTGGAAAAAGTCCCTGAGGGCGGTTAGGAGTTCTGGGTGACCATCCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp CCCTGCCCCAAAGCCAGGTGCAAAATCCACAACAAGGATCCTCCCTCTGAGGTGCTACAAAGAGAAGGATaGGGAGGAAACAGTGCCCTA +
Preference number: 4 (lower is better)
Translates to: PCPKARCKIHNKDPPSEVLQREG*GGNSAL
Trigger: TAGGGCACTGTTTCCTCCCCATCCTTCTCTTTGTAG...CACCTCAGAGGGAGGATCCTTGTTGTGGATTTTGCACCTGGCTTTGGGGCAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp GCATTCAAGTGGGCCTTAGAGATGCTGGAGAAGAACAAATGGAATTGCTCGTCTCACGGAGCACTGAGGTaGGGGAGCATGGGGACGAGA +
Preference number: 4 (lower is better)
Translates to: AFKWALEMLEKNKWNCSSHGALR*GSMGTR
Trigger: TCTCGTCCCCATGCTCCCCCACCTCAGTGCTCCGTG...AGACGAGCAATTCCATTTGTTCTTCTCCAGCATCTCTAAGGCCCACTTGAATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp CTCCCCTCCCACCTTCTTCAGCCTGAGAATAGTCCCTGGCACAAGCAGGTAATCCTTCCTGCTGCATGGTaGTCACTTTTAGGAGACCGA +
Preference number: 4 (lower is better)
Translates to: LPSHLLQPENSPWHKQVILPAAW*SLLGDR
Trigger: TCGGTCTCCTAAAAGTGACCACCATGCAGCAGGAAG...GATTACCTGCTTGTGCCAGGGACTATTCTCAGGCTGAAGAAGGTGGGAGGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS-3UTR CCA 90 bp CCCAGTCTCTCATCAGTGACAGTACGTCGCAGCTGGGACGTCAGTGTTGCGTCGTTTCTTCCTGCTGCATaGTGGTCACTTTTAGGAGAC +
Preference number: 4 (lower is better)
Translates to: PSLSSVTVRRSWDVSVASFLPAA*WSLLGD
Trigger: GTCTCCTAAAAGTGACCACCATGCAGCAGGAAGAAA...CGACGCAACACTGACGTCCCAGCTGCGACGTACTGTCACTGATGAGAGACTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS-3UTR CCA 90 bp AATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTGAGCAATGCTCAACTCAGCTCTaGCTTCTGCGTGGGCTGGAT +
Preference number: 4 (lower is better)
Translates to: NHRGLACVSYLAGERGEQCSTQL*LLRGLD
Trigger: ATCCAGCCCACGCAGAAGCCAGAGCTGAGTTGAGCA...TTGCTCACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS-3UTR CCA 90 bp CCCTGCCCCAAAGCCAGGTGCAAAATCCACAACAAGGATCCTCCCTCTGAGGTGTCTTCAGTTCCTCTGTaGGACTTTCCTCAGCCTTTC +
Preference number: 4 (lower is better)
Translates to: PCPKARCKIHNKDPPSEVSSVPL*DFPQPF
Trigger: GAAAGGCTGAGGAAAGTCCCACAGAGGAACTGAAGA...CACCTCAGAGGGAGGATCCTTGTTGTGGATTTTGCACCTGGCTTTGGGGCAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS-3UTR CCA 90 bp CTGCCAGCCCCAGCAGCAGTGCAAGGATGCGGTGTTTCCTGTATATATATCTATACCCTACTTGGTCCTTaGGCTCTGGGCTGGCTTTCG +
Preference number: 4 (lower is better)
Translates to: LPAPAAVQGCGVSCIYIYTLLGP*ALGWLS
Trigger: CGAAAGCCAGCCCAGAGCCCAAGGACCAAGTAGGGT...ATAGATATATATACAGGAAACACCGCATCCTTGCACTGCTGCTGGGGCTGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS-3UTR CCA 90 bp AGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGACCACAAACCCTACTTaGTCCTTGGGCTCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: RAGGTSTIIVVWLAFLIWTTNPT*SLGSGL
Trigger: CAGCCCAGAGCCCAAGGACCAAGTAGGGTTTGTGGT...CCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636016.2
3UTR CAA 72 bp TGTCCTGGGACAGGGGAGGGCTTTGCAAATGCAGTTTaGATCTTTCAGGGTCTGCCCCATGAAGCCTCCTTA +
Preference number: 4 (lower is better)
Translates to: CPGTGEGFANAV*IFQGLPHEASL
Trigger: TAAGGAGGCTTCATGGGGCAGACCCTGAAAGATCAAAACTGCATTTGCAAAGCCCTCCCCTGTCCCAGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
3UTR CAA 72 bp GGCAGAGAGCAATGCCAAGCTTGTGATGGGAGCTTCTaGAAGGGTTCCTGTGGTCTTGGGGTAATTTCTGGG +
Preference number: 4 (lower is better)
Translates to: GREQCQACDGSF*KGSCGLGVISG
Trigger: CCCAGAAATTACCCCAAGACCACAGGAACCCTTCAAGAAGCTCCCATCACAAGCTTGGCATTGCTCTCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp AGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCCTTCTCTAGGAGGTTaGGGTGTTCACAGACCAGGT +
Preference number: 4 (lower is better)
Translates to: RAGGTSTIIVVWLAFLIWPSLGG*GVHRPG
Trigger: ACCTGGTCTGTGAACACCTCAACCTCCTAGAGAAGG...CCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp GAAGGCCCCTTCTTAATGGTTCTCTGGCTTGGGTTGGACCAGAAATGCCAGGATCCTTCTCTAGGAGGTTaGGGTGTTCACAGACCAGGT +
Preference number: 4 (lower is better)
Translates to: EGPFLMVLWLGLDQKCQDPSLGG*GVHRPG
Trigger: ACCTGGTCTGTGAACACCTCAACCTCCTAGAGAAGG...ATCCTGGCATTTCTGGTCCAACCCAAGCCAGAGAACCATTAAGAAGGGGCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp TGCTGGAGAAGAACAAATGGAATTGCTCGTCTGCTAACTGTAACGTGCAGAACCCCAGTAGGGCATGCGTaGCAAAGGAGCATGGCAGCC +
Preference number: 4 (lower is better)
Translates to: CWRRTNGIARLLTVTCRTPVGHA*QRSMAA
Trigger: GGCTGCCATGCTCCTTTGTCACGCATGCCCTACTGG...GGTTCTGCACGTTACAGTTAGCAGACGAGCAATTCCATTTGTTCTTCTCCAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp GCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTAATGCCCCAGGCCGGATCTTaGTATAGAAGTTACTCCTCT +
Preference number: 4 (lower is better)
Translates to: AGTSVLRRRIQNEGPFLMPQAGS*YRSYSS
Trigger: AGAGGAGTAACTTCTATATCAAGATCCGGCCTGGGG...CATTAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp TCCCACCTTCTTCAGCCTGAGAATAGTCCCTGGCACAAGCAGGTAATCAGTAAACCACAGTCTCTTGGCTaGCCGGTGGTTTGGGAGCTT +
Preference number: 4 (lower is better)
Translates to: SHLLQPENSPWHKQVISKPQSLG*PVVWEL
Trigger: AAGCTCCCAAACCACCGGTCAGCCAAGAGACTGTGG...TTTACTGATTACCTGCTTGTGCCAGGGACTATTCTCAGGCTGAAGAAGGTGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp TCGTCTGCTAACTGTAACGTGCAGAACCAGGGCGGGAGGGACTTCTACAATCATCTTTCACAGTTTTGGTaGCATGGGTGGTGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: SSANCNVQNQGGRDFYNHLSQFW*HGWWWR
Trigger: CCTCCACCACCACCCATGTCACCAAAACTGTGAAAG...ATGATTGTAGAAGTCCCTCCCGCCCTGGTTCTGCACGTTACAGTTAGCAGACGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp GCAGCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTATCGGAGAATCCAGAATaGAGGCCCCTTCTTAATGGT +
Preference number: 4 (lower is better)
Translates to: AAGTSVLRRRIQNEGPFLSENPE*RPLLNG
Trigger: ACCATTAAGAAGGGGCCTTCATTCTGGATTCTCCGA...TAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp AAGACTGAAAACCAAGGCAAGCCCCGTAGGGAGATAAGGACTAAGCCAGGGACCTTCTCGGAAAATGGTTaGCTGTGCGTGTCTTGCTGC +
Preference number: 4 (lower is better)
Translates to: KTENQGKPRREIRTKPGTFSENG*LCVSCC
Trigger: GCAGCAAGACACGCACAGTCAACCATTTTCCGAGAA...GGTCCCTGGCTTAGTCCTTATCTCCCTACGGGGCTTGCCTTGGTTTTCAGTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp GCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTAATGATGACAGCAAGACATTaGGAGTTGAGGGTGAGGGGA +
Preference number: 4 (lower is better)
Translates to: AGTSVLRRRIQNEGPFLMMTARH*ELRVRG
Trigger: TCCCCTCACCCTCAACTCTCAATGTCTTGCTGTCAT...CATTAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp CCAGCCCCAGCAGCAGTGCAAGGATGCGGTGTTTCCTGTATATATATCTATATCAGGGAGTGGTTGCTATaGACTCCCTCCCCACTGAGG +
Preference number: 4 (lower is better)
Translates to: PAPAAVQGCGVSCIYIYIREWLL*TPSPLR
Trigger: CCTCAGTGGGGAGGGAGTTCATAGCAACCACTCCCT...GATATAGATATATATACAGGAAACACCGCATCCTTGCACTGCTGCTGGGGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp TTAATGGTTCTCTGGCTTGGGTTGGACCAGAAATGCCAGGATCTCTTCACAGAGAGGGAGTGGTTGCTATaGACTCCCTCCCCACTGAGG +
Preference number: 4 (lower is better)
Translates to: LMVLWLGLDQKCQDLFTEREWLL*TPSPLR
Trigger: CCTCAGTGGGGAGGGAGTTCATAGCAACCACTCCCT...CTCTGTGAAGAGATCCTGGCATTTCTGGTCCAACCCAAGCCAGAGAACCATTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp GAAGGCCCCTTCTTAATGGTTCTCTGGCTTGGGTTGGACCAGAAATGCCAGGATATATGGTCTCCGTGGTaGTGGAGGGAGTGGTTGCTA +
Preference number: 4 (lower is better)
Translates to: EGPFLMVLWLGLDQKCQDIWSPW*WREWLL
Trigger: TAGCAACCACTCCCTCCATCACCACGGAGACCATAT...ATCCTGGCATTTCTGGTCCAACCCAAGCCAGAGAACCATTAAGAAGGGGCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp TCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTGATATGGTCTCCGTGGTaGTGGAGGGAGTGGTTGCTA +
Preference number: 4 (lower is better)
Translates to: STIIVVWLAFLIWRGKGVIWSPW*WREWLL
Trigger: TAGCAACCACTCCCTCCATCACCACGGAGACCATAT...CACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp ACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTAATGGTTCTCGCTGGGCCAGTTCAGTaGGATCTAGGAACCTCAGGA +
Preference number: 4 (lower is better)
Translates to: TSVLRRRIQNEGPFLMVLAGPVQ*DLGTSG
Trigger: TCCTGAGGTTCCTAGATCTCACTGAACTGGCCCAGC...GAGAACCATTAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp TTCAGTGTGCTCAGGACTCCTGGTTCCTGCAAAGATGAGTTCCTAGACCGAAGTGCTGGGCCAGTTCAGTaGGATCTAGGAACCTCAGGA +
Preference number: 4 (lower is better)
Translates to: FSVLRTPGSCKDEFLDRSAGPVQ*DLGTSG
Trigger: TCCTGAGGTTCCTAGATCTCACTGAACTGGCCCAGC...ACTTCGGTCTAGGAACTCATCTTTGCAGGAACCAGGAGTCCTGAGCACACTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp GCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTAATGACAGTATTACTACACTaGACCCGTCAGCCCCTACTG +
Preference number: 4 (lower is better)
Translates to: AGTSVLRRRIQNEGPFLMTVLLH*TRQPLL
Trigger: CAGTAGGGGCTGACGGGTTCAGTGTAGTAATACTGT...CATTAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp CTGCTCTGCCAGCCCCAGCAGCAGTGCAAGGATGCGGTGTTTCCTGTATATATAACAGTATTACTACACTaGACCCGTCAGCCCCTACTG +
Preference number: 4 (lower is better)
Translates to: LLCQPQQQCKDAVFPVYITVLLH*TRQPLL
Trigger: CAGTAGGGGCTGACGGGTTCAGTGTAGTAATACTGT...TATATATACAGGAAACACCGCATCCTTGCACTGCTGCTGGGGCTGGCAGAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp ACTCTCAAGAAGGGCAGGAAGAAGGTTCTGTGGCTTTTCCACCAGGATTGTAGATCAGGGTCTGCCCCATaGAGCCTCCTTACCATGGCT +
Preference number: 4 (lower is better)
Translates to: TLKKGRKKVLWLFHQDCRSGSAP*SLLTMA
Trigger: AGCCATGGTAAGGAGGCTTCATGGGGCAGACCCTGA...TCTACAATCCTGGTGGAAAAGCCACAGAACCTTCTTCCTGCCCTTCTTGAGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp AGGTGTATGTCATCACTGACAAGCCAAAGGGACGCATCTAACCTGGGCCGCCTGTTGCAAATGCAGTTTTaGTCTTTCAGGGTCTGCCCC +
Preference number: 4 (lower is better)
Translates to: RCMSSLTSQRDASNLGRLLQMQF*SFRVCP
Trigger: GGGGCAGACCCTGAAAGATCAAAACTGCATTTGCAA...CAGGCGGCCCAGGTTAGATGCGTCCCTTTGGCTTGTCAGTGATGACATACACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp AAATGTAGGTGTTCAGATGTCGGTTGTTGCTGTCAGCCAACTGCTCTGCCAGCCGCAATGCCAAGCTTGTaGTGGGAGCTTCTTGAAGGG +
Preference number: 4 (lower is better)
Translates to: KCRCSDVGCCCQPTALPAAMPSL*WELLEG
Trigger: CCCTTCAAGAAGCTCCCATCACAAGCTTGGCATTGC...GGCTGGCAGAGCAGTTGGCTGACAGCAACAACCGACATCTGAACACCTACATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp GAAGGCCCCTTCTTAATGGTTCTCTGGCTTGGGTTGGACCAGAAATGCCAGGATGCAATGCCAAGCTTGTaGTGGGAGCTTCTTGAAGGG +
Preference number: 4 (lower is better)
Translates to: EGPFLMVLWLGLDQKCQDAMPSL*WELLEG
Trigger: CCCTTCAAGAAGCTCCCATCACAAGCTTGGCATTGC...ATCCTGGCATTTCTGGTCCAACCCAAGCCAGAGAACCATTAAGAAGGGGCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp TCGTCTGCTAACTGTAACGTGCAGAACCAGGGCGGGAGGGACTTCTACAATCATGCAATGCCAAGCTTGTaGTGGGAGCTTCTTGAAGGG +
Preference number: 4 (lower is better)
Translates to: SSANCNVQNQGGRDFYNHAMPSL*WELLEG
Trigger: CCCTTCAAGAAGCTCCCATCACAAGCTTGGCATTGC...ATGATTGTAGAAGTCCCTCCCGCCCTGGTTCTGCACGTTACAGTTAGCAGACGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp GAGGCGGGAGAGAGGAAGGTAGGTTTTGCAGCCCAGTGTCAAGATCCAGAAAGTGGTGTATGTCATCACTaGCAAGCCAAAGGGACGCAT +
Preference number: 4 (lower is better)
Translates to: EAGERKVGFAAQCQDPESGVCHH*QAKGTH
Trigger: ATGCGTCCCTTTGGCTTGTCAGTGATGACATACACC...ACTTTCTGGATCTTGACACTGGGCTGCAAAACCTACCTTCCTCTCTCCCGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp GCAGCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTAAAGCAAATGCTATTCTaGTTTCCTGCCCTGCCTCAG +
Preference number: 4 (lower is better)
Translates to: AAGTSVLRRRIQNEGPFLKQMLF*FPALPQ
Trigger: CTGAGGCAGGGCAGGAAATCAGAATAGCATTTGCTT...TAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp ACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTAATGGTTCTCCAAGGATCCTCCCTCTaGGGTGTGTTCAGTGTGCTC +
Preference number: 4 (lower is better)
Translates to: TSVLRRRIQNEGPFLMVLQGSSL*GVFSVL
Trigger: GAGCACACTGAACACACCTCAGAGGGAGGATCCTTG...GAGAACCATTAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp TCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTGAGGCTGGCAGGGGAATaGTCACCTCCATGTGAAGAA +
Preference number: 4 (lower is better)
Translates to: STIIVVWLAFLIWRGKGVRLAGE*SPPCEE
Trigger: TTCTTCACATGGAGGTGATCATTCCCCTGCCAGCCT...CACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS-3UTR GCA 90 bp TCGCAGCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTGGATTATCCCCATTTTaGAGATCAGGAGCCTATCCT +
Preference number: 4 (lower is better)
Translates to: SQLGRQCCVGESRMKAPSGLSPF*RSGAYP
Trigger: AGGATAGGCTCCTGATCTGCAAAATGGGGATAATCC...AGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGCTGCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000202028.9
CDS-3UTR GCA 90 bp AGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGGGGCTACTCCGGATCTaGTTCTTGATCTCCTTGGAG +
Preference number: 4 (lower is better)
Translates to: RAGGTSTIIVVWLAFLIWGLLRI*FLISLE
Trigger: CTCCAAGGAGATCAAGAAGCAGATCCGGAGTAGCCC...CCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp TCCCACCTTCTTCAGCCTGAGAATAGTCCCTGGCACAAGCAGGTAATCAGTAAAGAGCCCAGTAGGGCATaGGTGACAAAGGAGCATGGC +
Preference number: 4 (lower is better)
Translates to: SHLLQPENSPWHKQVISKEPSRA*VTKEHG
Trigger: GCCATGCTCCTTTGTCACGCATGCCCTACTGGGCTC...TTTACTGATTACCTGCTTGTGCCAGGGACTATTCTCAGGCTGAAGAAGGTGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp AACCAGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATGAGTCCTTGGCATGGTaGAGGTCTACTCCGTACATG +
Preference number: 4 (lower is better)
Translates to: NQGGRDFYNHRGLACVSYESLAW*RSTPYM
Trigger: CATGTACGGAGTAGACCTGCACCATGCCAAGGACTC...ATAAGAAACGCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCTGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp TCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTGGAGTCCTTGGCATGGTaGAGGTCTACTCCGTACATG +
Preference number: 4 (lower is better)
Translates to: STIIVVWLAFLIWRGKGVESLAW*RSTPYM
Trigger: CATGTACGGAGTAGACCTGCACCATGCCAAGGACTC...CACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp GCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTAATGATTGTGCTCTCAAATTaGTCATACTCCCCAGGCCGG +
Preference number: 4 (lower is better)
Translates to: AGTSVLRRRIQNEGPFLMIVLSN*SYSPGR
Trigger: CCGGCCTGGGGAGTATGAGCAATTTGAGAGCACAAT...CATTAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp AACGTGCAGAACCAGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCATGTATGATGCTCGATaGAGACCTTCCACAGTCTCT +
Preference number: 4 (lower is better)
Translates to: NVQNQGGRDFYNHRGLACMYDAR*RPSTVS
Trigger: AGAGACTGTGGAAGGTCTGCATCGAGCATCATACAT...GCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCTGGTTCTGCACGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp ATATATATGCTTTTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGCAGCTGTGGGCGGGAGAACTCTaGTCCATCAAGGCTGCGGGA +
Preference number: 4 (lower is better)
Translates to: IYMLFPSQSLISDSTSQLWAGEL*SIKAAG
Trigger: TCCCGCAGCCTTGATGGAGCAGAGTTCTCCCGCCCA...CAGCTGCGACGTACTGTCACTGATGAGAGACTGGGAAGGGAAAAGCATATATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp CATCTTCTACAATGGCTGAGAGCACCACCTCCCTTTGGATATGGAGTTGGTTATTGGGCGGGAGAACTCTaGTCCATCAAGGCTGCGGGA +
Preference number: 4 (lower is better)
Translates to: HLLQWLRAPPPFGYGVGYWAGEL*SIKAAG
Trigger: TCCCGCAGCCTTGATGGAGCAGAGTTCTCCCGCCCA...ATAACCAACTCCATATCCAAAGGGAGGTGGTGCTCTCAGCCATTGTAGAAGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp CTTTTCTTTTTCTCATTTCAAAGGAGAGTCATCTGCAGTGGCCCTCAGAAGGACTCAGCCTCTGACCGTTaGCCCCCAGACTCGCCATCC +
Preference number: 4 (lower is better)
Translates to: LFFFSFQRRVICSGPQKDSASDR*PPDSPS
Trigger: GGATGGCGAGTCTGGGGGGCAACGGTCAGAGGCTGA...GTCCTTCTGAGGGCCACTGCAGATGACTCTCCTTTGAAATGAGAAAAAGAAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp TTAATGGTTCTCTGGCTTGGGTTGGACCAGAAATGCCAGGATCTCTTCACAGAGGCCCTCCCTCAGCCCTaGTCTCTCATTGGCTTTCTC +
Preference number: 4 (lower is better)
Translates to: LMVLWLGLDQKCQDLFTEALPQP*SLIGFL
Trigger: GAGAAAGCCAATGAGAGAGCAGGGCTGAGGGAGGGC...CTCTGTGAAGAGATCCTGGCATTTCTGGTCCAACCCAAGCCAGAGAACCATTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
CDS-3UTR GCA 90 bp CATCTTCTACAATGGCTGAGAGCACCACCTCCCTTTGGATATGGAGTTGGTTATCGAGCTCAGGCAGGCTaGGGGAGAAGTCTTCGAAGG +
Preference number: 4 (lower is better)
Translates to: HLLQWLRAPPPFGYGVGYRAQAG*GRSLRR
Trigger: CCTTCGAAGACTTCTCCCGCAGCCTGCCTGAGCTCG...ATAACCAACTCCATATCCAAAGGGAGGTGGTGCTCTCAGCCATTGTAGAAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp CTCCCCTCCCACCTTCTTCAGCCTGAGAATAGTCCCTGGCACAAGCAGGTAATCAGCATATCAGGATGCTaGAGTTTGGCCTCCTTGATG +
Preference number: 4 (lower is better)
Translates to: LPSHLLQPENSPWHKQVISISGC*SLASLM
Trigger: CATCAAGGAGGCCAAACTGCAGCATCCTGATATGCT...GATTACCTGCTTGTGCCAGGGACTATTCTCAGGCTGAAGAAGGTGGGAGGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp GCTCGTCTGCTAACTGTAACGTGCAGAACCAGGGCGGGAGGGACTTCTACAATCAGCATATCAGGATGCTaGAGTTTGGCCTCCTTGATG +
Preference number: 4 (lower is better)
Translates to: ARLLTVTCRTRAGGTSTISISGC*SLASLM
Trigger: CATCAAGGAGGCCAAACTGCAGCATCCTGATATGCT...GATTGTAGAAGTCCCTCCCGCCCTGGTTCTGCACGTTACAGTTAGCAGACGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp GAGGCGGGAGAGAGGAAGGTAGGTTTTGCAGCCCAGTGTCAAGATCCAGAAAGTGGGTTGGACCAGAAATaGCAGGATCTCTTCACAGAG +
Preference number: 4 (lower is better)
Translates to: EAGERKVGFAAQCQDPESGLDQK*QDLFTE
Trigger: CTCTGTGAAGAGATCCTGGCATTTCTGGTCCAACCC...ACTTTCTGGATCTTGACACTGGGCTGCAAAACCTACCTTCCTCTCTCCCGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp CTGCTCTGCCAGCCCCAGCAGCAGTGCAAGGATGCGGTGTTTCCTGTATATATAGGGTTGGACCAGAAATaGCAGGATCTCTTCACAGAG +
Preference number: 4 (lower is better)
Translates to: LLCQPQQQCKDAVFPVYIGLDQK*QDLFTE
Trigger: CTCTGTGAAGAGATCCTGGCATTTCTGGTCCAACCC...TATATATACAGGAAACACCGCATCCTTGCACTGCTGCTGGGGCTGGCAGAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp AACCAGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATCTGGGACGTCAGTGTTaGGTCGGAGAATCCAGAATG +
Preference number: 4 (lower is better)
Translates to: NQGGRDFYNHRGLACVSYLGRQC*VGESRM
Trigger: CATTCTGGATTCTCCGACGCAACACTGACGTCCCAG...ATAAGAAACGCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCTGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp GCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTAATGTCAGATGTCGGTTGTTaGTGTCAGCCAACTGCTCTG +
Preference number: 4 (lower is better)
Translates to: AGTSVLRRRIQNEGPFLMSDVGC*CQPTAL
Trigger: CAGAGCAGTTGGCTGACAGCAACAACCGACATCTGA...CATTAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp TACGTCGCAGCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCGCAAGTGTTTTCCTTTaGATTCAAGTGGGCCTTAGA +
Preference number: 4 (lower is better)
Translates to: YVAAGTSVLRRRIQNEGPASVFL*IQVGLR
Trigger: TCTAAGGCCCACTTGAATGCAAAGGAAAACACTTGC...GGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGCTGCGACGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp TCGTCTGCTAACTGTAACGTGCAGAACCAGGGCGGGAGGGACTTCTACAATCATCAAAGGAGAGTCATCTaGAGTGGCCCTCAGAAGGAC +
Preference number: 4 (lower is better)
Translates to: SSANCNVQNQGGRDFYNHQRRVI*SGPQKD
Trigger: GTCCTTCTGAGGGCCACTGCAGATGACTCTCCTTTG...ATGATTGTAGAAGTCCCTCCCGCCCTGGTTCTGCACGTTACAGTTAGCAGACGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp GCAGCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTAGTGTTGCTTCTTTCTTaGCAAACCCACACCTCTCCA +
Preference number: 4 (lower is better)
Translates to: AAGTSVLRRRIQNEGPFLVLLLS*QTHTSP
Trigger: TGGAGAGGTGTGGGTTTGGCAAGAAAGAAGCAACAC...TAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp CCCTGCCCCAAAGCCAGGTGCAAAATCCACAACAAGGATCCTCCCTCTGAGGTGGACAGGGGAGGGCTTTaGAAATGCAGTTTTGATCTT +
Preference number: 4 (lower is better)
Translates to: PCPKARCKIHNKDPPSEVDRGGL*KCSFDL
Trigger: AAGATCAAAACTGCATTTGCAAAGCCCTCCCCTGTC...CACCTCAGAGGGAGGATCCTTGTTGTGGATTTTGCACCTGGCTTTGGGGCAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp AAATGTAGGTGTTCAGATGTCGGTTGTTGCTGTCAGCCAACTGCTCTGCCAGCCTGTGGCAGAGAGCAATaGCAAGCTTGTGATGGGAGC +
Preference number: 4 (lower is better)
Translates to: KCRCSDVGCCCQPTALPACGREQ*QACDGS
Trigger: GCTCCCATCACAAGCTTGGCATTGCTCTCTGCCACA...GGCTGGCAGAGCAGTTGGCTGACAGCAACAACCGACATCTGAACACCTACATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp TTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGCAGCTGGGACGTCAGTGTCTGAGAAATTCGCAGTaGAGTGGGACATTTTCCCTC +
Preference number: 4 (lower is better)
Translates to: FPSQSLISDSTSQLGRQCLRNSQ*SGTFSL
Trigger: GAGGGAAAATGTCCCACTGCACTGCGAATTTCTCAG...ACACTGACGTCCCAGCTGCGACGTACTGTCACTGATGAGAGACTGGGAAGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp AATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTGAGCAAGGTGTATGGAAAGTGTaGTGCTACACTCAGGGGGAG +
Preference number: 4 (lower is better)
Translates to: NHRGLACVSYLAGERGEQGVWKV*CYTQGE
Trigger: CTCCCCCTGAGTGTAGCAGCACACTTTCCATACACC...TTGCTCACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp TTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTAATGGTTCTCTGGCTTGGGGGTGTATGGAAAGTGTaGTGCTACACTCAGGGGGAG +
Preference number: 4 (lower is better)
Translates to: LRRRIQNEGPFLMVLWLGGVWKV*CYTQGE
Trigger: CTCCCCCTGAGTGTAGCAGCACACTTTCCATACACC...CCCAAGCCAGAGAACCATTAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp TTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGCAGCTGGGACGTCAGTGTAGGACTCCTGGTTCCTaGAAAGATGAGTTCCTAGAC +
Preference number: 4 (lower is better)
Translates to: FPSQSLISDSTSQLGRQCRTPGS*KDEFLD
Trigger: GTCTAGGAACTCATCTTTGCAGGAACCAGGAGTCCT...ACACTGACGTCCCAGCTGCGACGTACTGTCACTGATGAGAGACTGGGAAGGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp CCAGGATGGTCACCCAGAACTCCTAACCGCCCTCAGGGACTTTTTCCACTATGCAGGACTCCTGGTTCCTaGAAAGATGAGTTCCTAGAC +
Preference number: 4 (lower is better)
Translates to: PGWSPRTPNRPQGLFPLCRTPGS*KDEFLD
Trigger: GTCTAGGAACTCATCTTTGCAGGAACCAGGAGTCCT...GCATAGTGGAAAAAGTCCCTGAGGGCGGTTAGGAGTTCTGGGTGACCATCCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp CTCCCCTCCCACCTTCTTCAGCCTGAGAATAGTCCCTGGCACAAGCAGGTAATCTGCCCCAAAGCCAGGTaGAAAATCCACAACAAGGAT +
Preference number: 4 (lower is better)
Translates to: LPSHLLQPENSPWHKQVICPKAR*KIHNKD
Trigger: ATCCTTGTTGTGGATTTTGCACCTGGCTTTGGGGCA...GATTACCTGCTTGTGCCAGGGACTATTCTCAGGCTGAAGAAGGTGGGAGGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp AGGTGTATGTCATCACTGACAAGCCAAAGGGACGCATCTAACCTGGGCCGCCTGTGCCCCAAAGCCAGGTaGAAAATCCACAACAAGGAT +
Preference number: 4 (lower is better)
Translates to: RCMSSLTSQRDASNLGRLCPKAR*KIHNKD
Trigger: ATCCTTGTTGTGGATTTTGCACCTGGCTTTGGGGCA...CAGGCGGCCCAGGTTAGATGCGTCCCTTTGGCTTGTCAGTGATGACATACACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp TTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGCAGCTGGGACGTCAGTGTTGCCCCAAAGCCAGGTaGAAAATCCACAACAAGGAT +
Preference number: 4 (lower is better)
Translates to: FPSQSLISDSTSQLGRQCCPKAR*KIHNKD
Trigger: ATCCTTGTTGTGGATTTTGCACCTGGCTTTGGGGCA...ACACTGACGTCCCAGCTGCGACGTACTGTCACTGATGAGAGACTGGGAAGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp GACTTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGTGGTCACTTCACCCCTaGCCCAAAGCCAGGTGCAAA +
Preference number: 4 (lower is better)
Translates to: DFYNHRGLACVSYLAGERWSLHP*PKARCK
Trigger: TTTGCACCTGGCTTTGGGGCAGGGGTGAAGTGACCA...CCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGAAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp GAAGGTGTCTTGAACTGGCATTTTGGGGACGACATCTGTGTTGCTTCTTTCTTGCCTCGTGGCACTGCCTaGATCTCCGTAGAAGGGAGG +
Preference number: 4 (lower is better)
Translates to: EGVLNWHFGDDICVASFLPRGTA*ISVEGR
Trigger: CCTCCCTTCTACGGAGATGCAGGCAGTGCCACGAGG...CAAGAAAGAAGCAACACAGATGTCGTCCCCAAAATGCCAGTTCAAGACACCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp ATATATATGCTTTTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGCAGCTGCCTCGTGGCACTGCCTaGATCTCCGTAGAAGGGAGG +
Preference number: 4 (lower is better)
Translates to: IYMLFPSQSLISDSTSQLPRGTA*ISVEGR
Trigger: CCTCCCTTCTACGGAGATGCAGGCAGTGCCACGAGG...CAGCTGCGACGTACTGTCACTGATGAGAGACTGGGAAGGGAAAAGCATATATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp GACTTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGTGTCAGGGTCTGCCTTaGTGGAACCTGTTCCGTCAG +
Preference number: 4 (lower is better)
Translates to: DFYNHRGLACVSYLAGERCQGLP*WNLFRQ
Trigger: CTGACGGAACAGGTTCCAGCAAGGCAGACCCTGACA...CCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGAAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373950.6
CDS-3UTR GCA 90 bp TCATCAGTGACAGTACGTCGCAGCTGGGACGTCAGTGTTGCGTCGGAGAATCCATGCCTTTCTTCCTGCTaGATGGTGGTCACTTTTAGG +
Preference number: 4 (lower is better)
Translates to: SSVTVRRSWDVSVASENPCLSSC*MVVTFR
Trigger: CCTAAAAGTGACCACCATGCAGCAGGAAGAAAGGCA...TGGATTCTCCGACGCAACACTGACGTCCCAGCTGCGACGTACTGTCACTGATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS-3UTR GCA 90 bp GCATTCAAGTGGGCCTTAGAGATGCTGGAGAAGAACAAATGGAATTGCTCGTCTTGCCTCTCTGGTGTCTaGCCTGAGCTCAGAGCCCTC +
Preference number: 4 (lower is better)
Translates to: AFKWALEMLEKNKWNCSSCLSGV*PELRAL
Trigger: GAGGGCTCTGAGCTCAGGGCAGACACCAGAGAGGCA...AGACGAGCAATTCCATTTGTTCTTCTCCAGCATCTCTAAGGCCCACTTGAATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS-3UTR CCA 90 bp TTTCTTTTTCTCATTTCAAAGGAGAGTCATCTGCAGTGGCCCTCAGAAGGACCAGGGCCTTGCTGGGCGTaGTCCTCTCCGAAAGGCCAT +
Preference number: 4 (lower is better)
Translates to: FLFLISKESHLQWPSEGPGPCWA*SSPKGH
Trigger: ATGGCCTTTCGGAGAGGACCACGCCCAGCAAGGCCC...TGGTCCTTCTGAGGGCCACTGCAGATGACTCTCCTTTGAAATGAGAAAAAGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp ACAAATGGAATTGCTCGTCTGCTAACTGTAACGTGCAGAACCAGGGCGGGAGGGTTCTTGGCAATCTTCTaGGGCGATTTCTGGGCCTTG +
Preference number: 4 (lower is better)
Translates to: TNGIARLLTVTCRTRAGGFLAIF*GDFWAL
Trigger: CAAGGCCCAGAAATCGCCCCAGAAGATTGCCAAGAA...CCCTCCCGCCCTGGTTCTGCACGTTACAGTTAGCAGACGAGCAATTCCATTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp CTGCTCTGCCAGCCCCAGCAGCAGTGCAAGGATGCGGTGTTTCCTGTATATATATCCAGCCAGTTCTTCTaGCTGTCAGCATCACAGAAG +
Preference number: 4 (lower is better)
Translates to: LLCQPQQQCKDAVFPVYISSQFF*LSASQK
Trigger: CTTCTGTGATGCTGACAGCCAGAAGAACTGGCTGGA...TATATATACAGGAAACACCGCATCCTTGCACTGCTGCTGGGGCTGGCAGAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp ACAAATGGAATTGCTCGTCTGCTAACTGTAACGTGCAGAACCAGGGCGGGAGGGTCCAGCCAGTTCTTCTaGCTGTCAGCATCACAGAAG +
Preference number: 4 (lower is better)
Translates to: TNGIARLLTVTCRTRAGGSSQFF*LSASQK
Trigger: CTTCTGTGATGCTGACAGCCAGAAGAACTGGCTGGA...CCCTCCCGCCCTGGTTCTGCACGTTACAGTTAGCAGACGAGCAATTCCATTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp CCAGCCCCAGCAGCAGTGCAAGGATGCGGTGTTTCCTGTATATATATCTATATCCGTGACAAAGGAGCATaGCAGCCGGCCCGTGATGAT +
Preference number: 4 (lower is better)
Translates to: PAPAAVQGCGVSCIYIYIRDKGA*QPARDD
Trigger: ATCATCACGGGCCGGCTGCCATGCTCCTTTGTCACG...GATATAGATATATATACAGGAAACACCGCATCCTTGCACTGCTGCTGGGGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp CCACCAGTTCTTCAATTTGTCTGCAAAGGAAATGTAGGTGTTCAGATGTCGGTTTCCAGCTCCCGGGTCTaGTTAGGGGCGAAGCGGAGC +
Preference number: 4 (lower is better)
Translates to: PPVLQFVCKGNVGVQMSVSSSRV*LGAKRS
Trigger: GCTCCGCTTCGCCCCTAACCAGACCCGGGAGCTGGA...AACCGACATCTGAACACCTACATTTCCTTTGCAGACAAATTGAAGAACTGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp AGGAAATGTAGGTGTTCAGATGTCGGTTGTTGCTGTCAGCCAACTGCTCTGCCATGCCCTCAGAGTCCTTaGCATGGTGCAGGTCTACTC +
Preference number: 4 (lower is better)
Translates to: RKCRCSDVGCCCQPTALPCPQSP*HGAGLL
Trigger: GAGTAGACCTGCACCATGCCAAGGACTCTGAGGGCA...TGGCAGAGCAGTTGGCTGACAGCAACAACCGACATCTGAACACCTACATTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp GGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTGAGCAAGGGATTATACTCTTGGCTGACCGGTaGTTTGGGAGCTTAAAGCCA +
Preference number: 4 (lower is better)
Translates to: GLACVSYLAGERGEQGIILLADR*FGSLKP
Trigger: TGGCTTTAAGCTCCCAAACCACCGGTCAGCCAAGAG...TATAATCCCTTGCTCACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp CTTTTCTTTTTCTCATTTCAAAGGAGAGTCATCTGCAGTGGCCCTCAGAAGGACTCACCAGGAAGCCCTTaGGTGGGGGCTCAGGGGACA +
Preference number: 4 (lower is better)
Translates to: LFFFSFQRRVICSGPQKDSPGSP*VGAQGT
Trigger: TGTCCCCTGAGCCCCCACCCAAGGGCTTCCTGGTGA...GTCCTTCTGAGGGCCACTGCAGATGACTCTCCTTTGAAATGAGAAAAAGAAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp CTGCCAGCCCCAGCAGCAGTGCAAGGATGCGGTGTTTCCTGTATATATATCTATCACTGTACCGGAACTTaGAGCCCATCACCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: LPAPAAVQGCGVSCIYIYHCTGT*SPSPGS
Trigger: GCTTCCTGGTGATGGGCTCCAAGTTCCGGTACAGTG...ATAGATATATATACAGGAAACACCGCATCCTTGCACTGCTGCTGGGGCTGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp TTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTCACTGTACCGGAACTTaGAGCCCATCACCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: FYNHRGLACVSYLAGERGHCTGT*SPSPGS
Trigger: GCTTCCTGGTGATGGGCTCCAAGTTCCGGTACAGTG...ACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp TTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGCAGCTGGGACGTCAGTGTTGGTGTACCGTTTGCTaGAAGAACGCTCAAAGAAGG +
Preference number: 4 (lower is better)
Translates to: FPSQSLISDSTSQLGRQCWCTVC*KNAQRR
Trigger: CCTTCTTTGAGCGTTCTTCCAGCAAACGGTACACCA...ACACTGACGTCCCAGCTGCGACGTACTGTCACTGATGAGAGACTGGGAAGGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp TCATCAGTGACAGTACGTCGCAGCTGGGACGTCAGTGTTGCGTCGGAGAATCCATGGTGTACCGTTTGCTaGAAGAACGCTCAAAGAAGG +
Preference number: 4 (lower is better)
Translates to: SSVTVRRSWDVSVASENPWCTVC*KNAQRR
Trigger: CCTTCTTTGAGCGTTCTTCCAGCAAACGGTACACCA...TGGATTCTCCGACGCAACACTGACGTCCCAGCTGCGACGTACTGTCACTGATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp AATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTGAGCAACTCCTTGATCTTGGTTaGAGTCCTGACCTCTCCCTC +
Preference number: 4 (lower is better)
Translates to: NHRGLACVSYLAGERGEQLLDLG*SPDLSL
Trigger: GAGGGAGAGGTCAGGACTCCAACCAAGATCAAGGAG...TTGCTCACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp TCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTGCTCCTTGATCTTGGTTaGAGTCCTGACCTCTCCCTC +
Preference number: 4 (lower is better)
Translates to: STIIVVWLAFLIWRGKGVLLDLG*SPDLSL
Trigger: GAGGGAGAGGTCAGGACTCCAACCAAGATCAAGGAG...CACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp TTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGCAGCTGGGACGTCAGTGTTCATTGATGCTGGCCTaGTGCTTCAGCAAGACATCT +
Preference number: 4 (lower is better)
Translates to: FPSQSLISDSTSQLGRQCSLMLA*CFSKTS
Trigger: AGATGTCTTGCTGAAGCACCAGGCCAGCATCAATGA...ACACTGACGTCCCAGCTGCGACGTACTGTCACTGATGAGAGACTGGGAAGGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp TGCTGGAGAAGAACAAATGGAATTGCTCGTCTGCTAACTGTAACGTGCAGAACCGGCCCGGGGACGTGGTaGTTTGACTTTCTCCTCGGA +
Preference number: 4 (lower is better)
Translates to: CWRRTNGIARLLTVTCRTGPGTW*FDFLLG
Trigger: TCCGAGGAGAAAGTCAAACCACCACGTCCCCGGGCC...GGTTCTGCACGTTACAGTTAGCAGACGAGCAATTCCATTTGTTCTTCTCCAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp GCATTCAAGTGGGCCTTAGAGATGCTGGAGAAGAACAAATGGAATTGCTCGTCTGGCCCGGGGACGTGGTaGTTTGACTTTCTCCTCGGA +
Preference number: 4 (lower is better)
Translates to: AFKWALEMLEKNKWNCSSGPGTW*FDFLLG
Trigger: TCCGAGGAGAAAGTCAAACCACCACGTCCCCGGGCC...AGACGAGCAATTCCATTTGTTCTTCTCCAGCATCTCTAAGGCCCACTTGAATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp ACCAGTTCTTCAATTTGTCTGCAAAGGAAATGTAGGTGTTCAGATGTCGGTTGTGCCTGTGTCACTCTCTaGGGCCCGGGGACGTGGTGG +
Preference number: 4 (lower is better)
Translates to: TSSSICLQRKCRCSDVGCACVTL*GPGTWW
Trigger: CCACCACGTCCCCGGGCCCCAGAGAGTGACACAGGC...ACAACCGACATCTGAACACCTACATTTCCTTTGCAGACAAATTGAAGAACTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp ATCTATATATATATGCTTTTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGGCCTGTGTCACTCTCTaGGGCCCGGGGACGTGGTGG +
Preference number: 4 (lower is better)
Translates to: IYIYMLFPSQSLISDSTSACVTL*GPGTWW
Trigger: CCACCACGTCCCCGGGCCCCAGAGAGTGACACAGGC...CGACGTACTGTCACTGATGAGAGACTGGGAAGGGAAAAGCATATATATATAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp TTAATGGTTCTCTGGCTTGGGTTGGACCAGAAATGCCAGGATCTCTTCACAGAGTCCCTCTCCTGGTCCTaGTCCTCATCGCCTGTGTCA +
Preference number: 4 (lower is better)
Translates to: LMVLWLGLDQKCQDLFTESLSWS*SSSPVS
Trigger: TGACACAGGCGATGAGGACCAGGACCAGGAGAGGGA...CTCTGTGAAGAGATCCTGGCATTTCTGGTCCAACCCAAGCCAGAGAACCATTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp TTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTCGCTCAATGGCCAGGTaGTTGTCCTTCAGGAACACC +
Preference number: 4 (lower is better)
Translates to: FYNHRGLACVSYLAGERGRSMAR*LSFRNT
Trigger: GGTGTTCCTGAAGGACAACCACCTGGCCATTGAGCG...ACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp TTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTAATGGTTCTCTGGCTTGGGAGCACTTGCGCTCAATaGCCAGGTGGTTGTCCTTCA +
Preference number: 4 (lower is better)
Translates to: LRRRIQNEGPFLMVLWLGSTCAQ*PGGCPS
Trigger: TGAAGGACAACCACCTGGCCATTGAGCGCAAGTGCT...CCCAAGCCAGAGAACCATTAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp GAAGGCCCCTTCTTAATGGTTCTCTGGCTTGGGTTGGACCAGAAATGCCAGGATAGCACTTGCGCTCAATaGCCAGGTGGTTGTCCTTCA +
Preference number: 4 (lower is better)
Translates to: EGPFLMVLWLGLDQKCQDSTCAQ*PGGCPS
Trigger: TGAAGGACAACCACCTGGCCATTGAGCGCAAGTGCT...ATCCTGGCATTTCTGGTCCAACCCAAGCCAGAGAACCATTAAGAAGGGGCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp AACCAGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATAGCACTTGCGCTCAATaGCCAGGTGGTTGTCCTTCA +
Preference number: 4 (lower is better)
Translates to: NQGGRDFYNHRGLACVSYSTCAQ*PGGCPS
Trigger: TGAAGGACAACCACCTGGCCATTGAGCGCAAGTGCT...ATAAGAAACGCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCTGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp GCAGCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTATTGAGACTGTTCTCCTaGGTGTTATCCATAGCGGAG +
Preference number: 4 (lower is better)
Translates to: AAGTSVLRRRIQNEGPFLLRLFS*VLSIAE
Trigger: CTCCGCTATGGATAACACCCAGGAGAACAGTCTCAA...TAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202028.9
ENST00000441639.5
CDS-3UTR CCA 90 bp GTTTTCCTTTGCATTCAAGTGGGCCTTAGAGATGCTGGAGAAGAACAAATGGAACACCGTCTGTGGGCCTaGGATCATGGCAGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: VFLCIQVGLRDAGEEQMEHRLWA*DHGSCP
Trigger: GGGGCAGCTGCCATGATCCCAGGCCCACAGACGGTG...TTCCATTTGTTCTTCTCCAGCATCTCTAAGGCCCACTTGAATGCAAAGGAAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp GTTTTCCTTTGCATTCAAGTGGGCCTTAGAGATGCTGGAGAAGAACAAATGGAACGTGGCCACCGTCTGTaGGCCTGGGATCATGGCAGC +
Preference number: 4 (lower is better)
Translates to: VFLCIQVGLRDAGEEQMERGHRL*AWDHGS
Trigger: GCTGCCATGATCCCAGGCCCACAGACGGTGGCCACG...TTCCATTTGTTCTTCTCCAGCATCTCTAAGGCCCACTTGAATGCAAAGGAAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp TGCTGGAGAAGAACAAATGGAATTGCTCGTCTGCTAACTGTAACGTGCAGAACCGAGAACGGATTTCCGTaGCCACCGTCTGTGGGCCTG +
Preference number: 4 (lower is better)
Translates to: CWRRTNGIARLLTVTCRTENGFP*PPSVGL
Trigger: CAGGCCCACAGACGGTGGCCACGGAAATCCGTTCTC...GGTTCTGCACGTTACAGTTAGCAGACGAGCAATTCCATTTGTTCTTCTCCAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp GAAGGCCCCTTCTTAATGGTTCTCTGGCTTGGGTTGGACCAGAAATGCCAGGATCTTGTCCCTCTCCTCTaGGGATGGGTCTGTTTCTCT +
Preference number: 4 (lower is better)
Translates to: EGPFLMVLWLGLDQKCQDLVPLL*GWVCFS
Trigger: AGAGAAACAGACCCATCCCCAGAGGAGAGGGACAAG...ATCCTGGCATTTCTGGTCCAACCCAAGCCAGAGAACCATTAAGAAGGGGCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp AACCAGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATCTTGTCCCTCTCCTCTaGGGATGGGTCTGTTTCTCT +
Preference number: 4 (lower is better)
Translates to: NQGGRDFYNHRGLACVSYLVPLL*GWVCFS
Trigger: AGAGAAACAGACCCATCCCCAGAGGAGAGGGACAAG...ATAAGAAACGCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCTGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp AGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCTTGTCCCTCTCCTCTaGGGATGGGTCTGTTTCTCT +
Preference number: 4 (lower is better)
Translates to: RAGGTSTIIVVWLAFLIWLVPLL*GWVCFS
Trigger: AGAGAAACAGACCCATCCCCAGAGGAGAGGGACAAG...CCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp TTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTAATGGTTCTCTGGCTTGGGCTTGTCCCTCTCCTCTaGGGATGGGTCTGTTTCTCT +
Preference number: 4 (lower is better)
Translates to: LRRRIQNEGPFLMVLWLGLVPLL*GWVCFS
Trigger: AGAGAAACAGACCCATCCCCAGAGGAGAGGGACAAG...CCCAAGCCAGAGAACCATTAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp TTAATGGTTCTCTGGCTTGGGTTGGACCAGAAATGCCAGGATCTCTTCACAGAGACAGTACGTCGCAGCTaGGACGTCAGTGTTGCGTCG +
Preference number: 4 (lower is better)
Translates to: LMVLWLGLDQKCQDLFTETVRRS*DVSVAS
Trigger: CGACGCAACACTGACGTCCCAGCTGCGACGTACTGT...CTCTGTGAAGAGATCCTGGCATTTCTGGTCCAACCCAAGCCAGAGAACCATTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp CCGCCCTCAGGGACTTTTTCCACTATGCTACATGGCCTCCTGGGTGGAGAGGTGACAATCATCGTGGTCTaGCTTGCGTTTCTTATTTGG +
Preference number: 4 (lower is better)
Translates to: PPSGTFSTMLHGLLGGEVTIIVV*LAFLIW
Trigger: CCAAATAAGAAACGCAAGCCAGACCACGATGATTGT...CACCTCTCCACCCAGGAGGCCATGTAGCATAGTGGAAAAAGTCCCTGAGGGCGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp TACGTCGCAGCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCACAATCATCGTGGTCTaGCTTGCGTTTCTTATTTGG +
Preference number: 4 (lower is better)
Translates to: YVAAGTSVLRRRIQNEGPTIIVV*LAFLIW
Trigger: CCAAATAAGAAACGCAAGCCAGACCACGATGATTGT...GGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGCTGCGACGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp TTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGCAGCTGGGACGTCAGTGTTCCTTTGCATTCAAGTaGGCCTTAGAGATGCTGGAG +
Preference number: 4 (lower is better)
Translates to: FPSQSLISDSTSQLGRQCSFAFK*ALEMLE
Trigger: CTCCAGCATCTCTAAGGCCCACTTGAATGCAAAGGA...ACACTGACGTCCCAGCTGCGACGTACTGTCACTGATGAGAGACTGGGAAGGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp TCGCAGCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTCTACTTCCCTTCCTGTaGCTTCGTTTTCTGTTCTTG +
Preference number: 4 (lower is better)
Translates to: SQLGRQCCVGESRMKAPSLLPFL*LRFLFL
Trigger: CAAGAACAGAAAACGAAGCCACAGGAAGGGAAGTAG...AGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGCTGCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp ACCAGTTCTTCAATTTGTCTGCAAAGGAAATGTAGGTGTTCAGATGTCGGTTGTGGTGACCAGCACGCCTaGGCCCGGGGTTCCCCATGT +
Preference number: 4 (lower is better)
Translates to: TSSSICLQRKCRCSDVGCGDQHA*ARGSPC
Trigger: ACATGGGGAACCCCGGGCCCAGGCGTGCTGGTCACC...ACAACCGACATCTGAACACCTACATTTCCTTTGCAGACAAATTGAAGAACTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338074.7
ENST00000636016.2
CDS-3UTR CCA 90 bp GCATTCAAGTGGGCCTTAGAGATGCTGGAGAAGAACAAATGGAATTGCTCGTCTGCTTCTCATTGGAGTTaGCCTCTGGGTGGCCGTGGC +
Preference number: 4 (lower is better)
Translates to: AFKWALEMLEKNKWNCSSASHWS*PLGGRG
Trigger: GCCACGGCCACCCAGAGGCCAACTCCAATGAGAAGC...AGACGAGCAATTCCATTTGTTCTTCTCCAGCATCTCTAAGGCCCACTTGAATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000636016.2
CDS-3UTR CCA 90 bp AATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTGAGCAACTCCCATCAACCTGCTaGGTGTTATCCATAGCGGAG +
Preference number: 4 (lower is better)
Translates to: NHRGLACVSYLAGERGEQLPSTC*VLSIAE
Trigger: CTCCGCTATGGATAACACCCAGCAGGTTGATGGGAG...TTGCTCACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338074.7
ENST00000373950.6
ENST00000628415.2
CDS-3UTR CCA 90 bp GCAGCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTACTTGAACTGGCATTTTaGGGACGACATCTGTGTTGC +
Preference number: 4 (lower is better)
Translates to: AAGTSVLRRRIQNEGPFLLELAF*GRHLCC
Trigger: GCAACACAGATGTCGTCCCCAAAATGCCAGTTCAAG...TAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp ACAAATGGAATTGCTCGTCTGCTAACTGTAACGTGCAGAACCAGGGCGGGAGGGCAGAGAAGTAGCTTGTaGCAGACAAGCCTGAGGAAG +
Preference number: 4 (lower is better)
Translates to: TNGIARLLTVTCRTRAGGQRSSL*QTSLRK
Trigger: CTTCCTCAGGCTTGTCTGCCACAAGCTACTTCTCTG...CCCTCCCGCCCTGGTTCTGCACGTTACAGTTAGCAGACGAGCAATTCCATTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp CCTATGAGCAACATCACCCGTCAGTCTCAGCTTTGTCCTGGGACAGGGGAGGGCAAATTCGCAGTGCAGTaGGACATTTTCCCTCATCAA +
Preference number: 4 (lower is better)
Translates to: PMSNITRQSQLCPGTGEGKFAVQ*DIFPHQ
Trigger: TTGATGAGGGAAAATGTCCCACTGCACTGCGAATTT...GCCCTCCCCTGTCCCAGGACAAAGCTGAGACTGACGGGTGATGTTGCTCATAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp CTCCCCTCCCACCTTCTTCAGCCTGAGAATAGTCCCTGGCACAAGCAGGTAATCCAGATGGGCCAGCCATaGTTGAAATATAAAGCTGGC +
Preference number: 4 (lower is better)
Translates to: LPSHLLQPENSPWHKQVIQMGQP*LKYKAG
Trigger: GCCAGCTTTATATTTCAACCATGGCTGGCCCATCTG...GATTACCTGCTTGTGCCAGGGACTATTCTCAGGCTGAAGAAGGTGGGAGGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp ACCAGTTCTTCAATTTGTCTGCAAAGGAAATGTAGGTGTTCAGATGTCGGTTGTGGGACGCATCTAACCTaGGCCGCCTGGGGGCATCCC +
Preference number: 4 (lower is better)
Translates to: TSSSICLQRKCRCSDVGCGTHLT*AAWGHP
Trigger: GGGATGCCCCCAGGCGGCCCAGGTTAGATGCGTCCC...ACAACCGACATCTGAACACCTACATTTCCTTTGCAGACAAATTGAAGAACTGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp TGCTGGAGAAGAACAAATGGAATTGCTCGTCTGCTAACTGTAACGTGCAGAACCGTGGCCCAGAGAGGATaGAGCCACCACTCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: CWRRTNGIARLLTVTCRTVAQRG*SHHSSS
Trigger: AGAGCTGGAGTGGTGGCTCCATCCTCTCTGGGCCAC...GGTTCTGCACGTTACAGTTAGCAGACGAGCAATTCCATTTGTTCTTCTCCAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp CCAGGATGGTCACCCAGAACTCCTAACCGCCCTCAGGGACTTTTTCCACTATGCCTACAAAGAGAAGGATaGGGAGGAAACAGTGCCCTA +
Preference number: 4 (lower is better)
Translates to: PGWSPRTPNRPQGLFPLCLQREG*GGNSAL
Trigger: TAGGGCACTGTTTCCTCCCCATCCTTCTCTTTGTAG...GCATAGTGGAAAAAGTCCCTGAGGGCGGTTAGGAGTTCTGGGTGACCATCCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp GCATTCAAGTGGGCCTTAGAGATGCTGGAGAAGAACAAATGGAATTGCTCGTCTACATGGCCTCCTGGGTaGAGAGGTGGCACAGAGAGG +
Preference number: 4 (lower is better)
Translates to: AFKWALEMLEKNKWNCSSTWPPG*RGGTER
Trigger: CCTCTCTGTGCCACCTCTCCACCCAGGAGGCCATGT...AGACGAGCAATTCCATTTGTTCTTCTCCAGCATCTCTAAGGCCCACTTGAATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp ATATATATGCTTTTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGCAGCTGACATGGCCTCCTGGGTaGAGAGGTGGCACAGAGAGG +
Preference number: 4 (lower is better)
Translates to: IYMLFPSQSLISDSTSQLTWPPG*RGGTER
Trigger: CCTCTCTGTGCCACCTCTCCACCCAGGAGGCCATGT...CAGCTGCGACGTACTGTCACTGATGAGAGACTGGGAAGGGAAAAGCATATATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp CCAGCCCCAGCAGCAGTGCAAGGATGCGGTGTTTCCTGTATATATATCTATATCTGCTACATGGCCTCCTaGGTGGAGAGGTGGCACAGA +
Preference number: 4 (lower is better)
Translates to: PAPAAVQGCGVSCIYIYICYMAS*VERWHR
Trigger: TCTGTGCCACCTCTCCACCCAGGAGGCCATGTAGCA...GATATAGATATATATACAGGAAACACCGCATCCTTGCACTGCTGCTGGGGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp CCCAGCAGCAGTGCAAGGATGCGGTGTTTCCTGTATATATATCTATATCTCTATCTTCCGGGAGCTGTCTaGCTCGCGGTCCTGGTGTCC +
Preference number: 4 (lower is better)
Translates to: PSSSARMRCFLYIYLYLYLPGAV*LAVLVS
Trigger: GGACACCAGGACCGCGAGCCAGACAGCTCCCGGAAG...ATAGAGATATAGATATATATACAGGAAACACCGCATCCTTGCACTGCTGCTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
CDS-3UTR CCA 90 bp GACTTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGTCCTCTGGGACTCATTaGCTTTCTCAGGGGTGCCCT +
Preference number: 4 (lower is better)
Translates to: DFYNHRGLACVSYLAGERSSGTH*LSQGCP
Trigger: AGGGCACCCCTGAGAAAGCCAATGAGTCCCAGAGGA...CCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGAAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS-3UTR CCA 90 bp AGGAAATGTAGGTGTTCAGATGTCGGTTGTTGCTGTCAGCCAACTGCTCTGCCATGGAGAGTCTGCCGTTaGCAAGGATACCAGCAAGGC +
Preference number: 4 (lower is better)
Translates to: RKCRCSDVGCCCQPTALPWRVCR*QGYQQG
Trigger: GCCTTGCTGGTATCCTTGCCAACGGCAGACTCTCCA...TGGCAGAGCAGTTGGCTGACAGCAACAACCGACATCTGAACACCTACATTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS-3UTR CCA 90 bp TCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTGGCTCTGGCTTCTGCGTaGGCTGGATCCAATAGAAAC +
Preference number: 4 (lower is better)
Translates to: STIIVVWLAFLIWRGKGVALASA*AGSNRN
Trigger: GTTTCTATTGGATCCAGCCCACGCAGAAGCCAGAGC...CACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS-3UTR CCA 90 bp GCAGCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTAGGTGGAGGGAGGACTTaGTCTTCTGAGTCTTTTTCT +
Preference number: 4 (lower is better)
Translates to: AAGTSVLRRRIQNEGPFLGGGRT*SSESFS
Trigger: AGAAAAAGACTCAGAAGACCAAGTCCTCCCTCCACC...TAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS-3UTR CCA 90 bp CCAGCCCCAGCAGCAGTGCAAGGATGCGGTGTTTCCTGTATATATATCTATATCCCCTGCCCCTTCCTTTaGGGAAGTCATGTGGGCTTC +
Preference number: 4 (lower is better)
Translates to: PAPAAVQGCGVSCIYIYIPCPFL*GSHVGF
Trigger: GAAGCCCACATGACTTCCCCAAAGGAAGGGGCAGGG...GATATAGATATATATACAGGAAACACCGCATCCTTGCACTGCTGCTGGGGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS-3UTR CCA 90 bp GAAGGCCCCTTCTTAATGGTTCTCTGGCTTGGGTTGGACCAGAAATGCCAGGATCCTTGGGCTCTGGGCTaGCTTTCGAAAGATGGACAT +
Preference number: 4 (lower is better)
Translates to: EGPFLMVLWLGLDQKCQDPWALG*LSKDGH
Trigger: ATGTCCATCTTTCGAAAGCCAGCCCAGAGCCCAAGG...ATCCTGGCATTTCTGGTCCAACCCAAGCCAGAGAACCATTAAGAAGGGGCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS-3UTR TCA 90 bp TTCAGTGTGCTCAGGACTCCTGGTTCCTGCAAAGATGAGTTCCTAGACCGAAGTCCTTCTCTAGGAGGTTaGGGTGTTCACAGACCAGGT +
Preference number: 4 (lower is better)
Translates to: FSVLRTPGSCKDEFLDRSPSLGG*GVHRPG
Trigger: ACCTGGTCTGTGAACACCTCAACCTCCTAGAGAAGG...ACTTCGGTCTAGGAACTCATCTTTGCAGGAACCAGGAGTCCTGAGCACACTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp TTTCTTTTTCTCATTTCAAAGGAGAGTCATCTGCAGTGGCCCTCAGAAGGACCACCAGTAGGGCATGCGTaGCAAAGGAGCATGGCAGCC +
Preference number: 4 (lower is better)
Translates to: FLFLISKESHLQWPSEGPPVGHA*QRSMAA
Trigger: GGCTGCCATGCTCCTTTGTCACGCATGCCCTACTGG...TGGTCCTTCTGAGGGCCACTGCAGATGACTCTCCTTTGAAATGAGAAAAAGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp TGCTGGAGAAGAACAAATGGAATTGCTCGTCTGCTAACTGTAACGTGCAGAACCCGAAGCGGAGCTCGCTaGCATAGTTGCCCACATGCT +
Preference number: 4 (lower is better)
Translates to: CWRRTNGIARLLTVTCRTRSGAR*HSCPHA
Trigger: AGCATGTGGGCAACTATGTCAGCGAGCTCCGCTTCG...GGTTCTGCACGTTACAGTTAGCAGACGAGCAATTCCATTTGTTCTTCTCCAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp TCGTCTGCTAACTGTAACGTGCAGAACCAGGGCGGGAGGGACTTCTACAATCATCACAAACGCCTAACATaGTGTCGATGCCCTCAGAGT +
Preference number: 4 (lower is better)
Translates to: SSANCNVQNQGGRDFYNHHKRLT*CRCPQS
Trigger: ACTCTGAGGGCATCGACATCATGTTAGGCGTTTGTG...ATGATTGTAGAAGTCCCTCCCGCCCTGGTTCTGCACGTTACAGTTAGCAGACGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp AGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCCCCAGGCCGGATCTTaGTATAGAAGTTACTCCTCT +
Preference number: 4 (lower is better)
Translates to: RAGGTSTIIVVWLAFLIWPQAGS*YRSYSS
Trigger: AGAGGAGTAACTTCTATATCAAGATCCGGCCTGGGG...CCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp TCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTGCCCCAGGCCGGATCTTaGTATAGAAGTTACTCCTCT +
Preference number: 4 (lower is better)
Translates to: STIIVVWLAFLIWRGKGVPQAGS*YRSYSS
Trigger: AGAGGAGTAACTTCTATATCAAGATCCGGCCTGGGG...CACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp AAATGTAGGTGTTCAGATGTCGGTTGTTGCTGTCAGCCAACTGCTCTGCCAGCCAGCCGGAAGAATGTATaGTGCTCGATGCAGACCTTC +
Preference number: 4 (lower is better)
Translates to: KCRCSDVGCCCQPTALPASRKNV*CSMQTF
Trigger: GAAGGTCTGCATCGAGCATCATACATTCTTCCGGCT...GGCTGGCAGAGCAGTTGGCTGACAGCAACAACCGACATCTGAACACCTACATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp AACCAGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATAGCCGGAAGAATGTATaGTGCTCGATGCAGACCTTC +
Preference number: 4 (lower is better)
Translates to: NQGGRDFYNHRGLACVSYSRKNV*CSMQTF
Trigger: GAAGGTCTGCATCGAGCATCATACATTCTTCCGGCT...ATAAGAAACGCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCTGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp CCACCAGTTCTTCAATTTGTCTGCAAAGGAAATGTAGGTGTTCAGATGTCGGTTCATCATGGTTCTCGCTaGCCGAGGCTGGGCGGGAGA +
Preference number: 4 (lower is better)
Translates to: PPVLQFVCKGNVGVQMSVHHGSR*PRLGGR
Trigger: TCTCCCGCCCAGCCTCGGTCAGCGAGAACCATGATG...AACCGACATCTGAACACCTACATTTCCTTTGCAGACAAATTGAAGAACTGGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp TATATATATATGCTTTTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGCAGTGGGGGCCCCCTTGTTaGGATCCCGGGAGAACAGCA +
Preference number: 4 (lower is better)
Translates to: YIYMLFPSQSLISDSTSQWGPPC*DPGRTA
Trigger: TGCTGTTCTCCCGGGATCTCAACAAGGGGGCCCCCA...CTGCGACGTACTGTCACTGATGAGAGACTGGGAAGGGAAAAGCATATATATATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp GCCAGTTCAGTGAGATCTAGGAACCTCAGGATACATCAATCACAGTCAGATAATTGGGGGCCCCCTTGTTaGGATCCCGGGAGAACAGCA +
Preference number: 4 (lower is better)
Translates to: ASSVRSRNLRIHQSQSDNWGPPC*DPGRTA
Trigger: TGCTGTTCTCCCGGGATCTCAACAAGGGGGCCCCCA...ATTATCTGACTGTGATTGATGTATCCTGAGGTTCCTAGATCTCACTGAACTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp GAGGCGGGAGAGAGGAAGGTAGGTTTTGCAGCCCAGTGTCAAGATCCAGAAAGTTCGGAGAATCCAGAATaGAGGCCCCTTCTTAATGGT +
Preference number: 4 (lower is better)
Translates to: EAGERKVGFAAQCQDPESSENPE*RPLLNG
Trigger: ACCATTAAGAAGGGGCCTTCATTCTGGATTCTCCGA...ACTTTCTGGATCTTGACACTGGGCTGCAAAACCTACCTTCCTCTCTCCCGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp AATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTGAGCAATTCTCGGAAAATGGTTaGCTGTGCGTGTCTTGCTGC +
Preference number: 4 (lower is better)
Translates to: NHRGLACVSYLAGERGEQFSENG*LCVSCC
Trigger: GCAGCAAGACACGCACAGTCAACCATTTTCCGAGAA...TTGCTCACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp GAAGGCCCCTTCTTAATGGTTCTCTGGCTTGGGTTGGACCAGAAATGCCAGGATATGACAGCAAGACATTaGGAGTTGAGGGTGAGGGGA +
Preference number: 4 (lower is better)
Translates to: EGPFLMVLWLGLDQKCQDMTARH*ELRVRG
Trigger: TCCCCTCACCCTCAACTCTCAATGTCTTGCTGTCAT...ATCCTGGCATTTCTGGTCCAACCCAAGCCAGAGAACCATTAAGAAGGGGCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp GGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTGAGCAAGGGATTATAATGACAGCAAGACATTaGGAGTTGAGGGTGAGGGGA +
Preference number: 4 (lower is better)
Translates to: GLACVSYLAGERGEQGIIMTARH*ELRVRG
Trigger: TCCCCTCACCCTCAACTCTCAATGTCTTGCTGTCAT...TATAATCCCTTGCTCACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp CTTTTCTTTTTCTCATTTCAAAGGAGAGTCATCTGCAGTGGCCCTCAGAAGGACGAACTCCCTCCCCACTaGGGCACTCCCATCAACCTG +
Preference number: 4 (lower is better)
Translates to: LFFFSFQRRVICSGPQKDELPPH*GTPINL
Trigger: CAGGTTGATGGGAGTGCCTCAGTGGGGAGGGAGTTC...GTCCTTCTGAGGGCCACTGCAGATGACTCTCCTTTGAAATGAGAAAAAGAAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp TTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTATATGGTCTCCGTGGTaGTGGAGGGAGTGGTTGCTA +
Preference number: 4 (lower is better)
Translates to: FYNHRGLACVSYLAGERGIWSPW*WREWLL
Trigger: TAGCAACCACTCCCTCCATCACCACGGAGACCATAT...ACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp CTTTTCTTTTTCTCATTTCAAAGGAGAGTCATCTGCAGTGGCCCTCAGAAGGACCCCCCTTCCCGGACTTaGGACTGTTCTCCATGGTGG +
Preference number: 4 (lower is better)
Translates to: LFFFSFQRRVICSGPQKDPPSRT*DCSPWW
Trigger: CCACCATGGAGAACAGTCTCAAGTCCGGGAAGGGGG...GTCCTTCTGAGGGCCACTGCAGATGACTCTCCTTTGAAATGAGAAAAAGAAAAG
51% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp ACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTAATGGTTCTCAGGGAGAAGGTGTCTTaGACTGGCATTTTGGGGACG +
Preference number: 4 (lower is better)
Translates to: TSVLRRRIQNEGPFLMVLREKVS*TGILGT
Trigger: CGTCCCCAAAATGCCAGTTCAAGACACCTTCTCCCT...GAGAACCATTAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp AGGAAATGTAGGTGTTCAGATGTCGGTTGTTGCTGTCAGCCAACTGCTCTGCCAAGGGAGAAGGTGTCTTaGACTGGCATTTTGGGGACG +
Preference number: 4 (lower is better)
Translates to: RKCRCSDVGCCCQPTALPREKVS*TGILGT
Trigger: CGTCCCCAAAATGCCAGTTCAAGACACCTTCTCCCT...TGGCAGAGCAGTTGGCTGACAGCAACAACCGACATCTGAACACCTACATTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp CTGCTCTGCCAGCCCCAGCAGCAGTGCAAGGATGCGGTGTTTCCTGTATATATATTGCAAATGCAGTTTTaGTCTTTCAGGGTCTGCCCC +
Preference number: 4 (lower is better)
Translates to: LLCQPQQQCKDAVFPVYILQMQF*SFRVCP
Trigger: GGGGCAGACCCTGAAAGATCAAAACTGCATTTGCAA...TATATATACAGGAAACACCGCATCCTTGCACTGCTGCTGGGGCTGGCAGAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp TTCAGTGTGCTCAGGACTCCTGGTTCCTGCAAAGATGAGTTCCTAGACCGAAGTGTGATGGGAGCTTCTTaGAGGGTTCCTGTGGTCTTG +
Preference number: 4 (lower is better)
Translates to: FSVLRTPGSCKDEFLDRSVMGAS*RVPVVL
Trigger: CAAGACCACAGGAACCCTTCAAGAAGCTCCCATCAC...ACTTCGGTCTAGGAACTCATCTTTGCAGGAACCAGGAGTCCTGAGCACACTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp TTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTAATGGTTCTCTGGCTTGGGTCAAGGGGCACTTTCTaGGCTCAGAGAAGTAGCTTG +
Preference number: 4 (lower is better)
Translates to: LRRRIQNEGPFLMVLWLGSRGTF*AQRSSL
Trigger: CAAGCTACTTCTCTGAGCTCAGAAAGTGCCCCTTGA...CCCAAGCCAGAGAACCATTAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp AAATGTAGGTGTTCAGATGTCGGTTGTTGCTGTCAGCCAACTGCTCTGCCAGCCTGGGCCAGCCATGGTTaGAATATAAAGCTGGCTCAG +
Preference number: 4 (lower is better)
Translates to: KCRCSDVGCCCQPTALPAWASHG*NIKLAQ
Trigger: CTGAGCCAGCTTTATATTTCAACCATGGCTGGCCCA...GGCTGGCAGAGCAGTTGGCTGACAGCAACAACCGACATCTGAACACCTACATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp TTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGCAGCTGGGACGTCAGTGTGCAGGATTCAAAAACTaGAACAGGTCCTGGTACTTC +
Preference number: 4 (lower is better)
Translates to: FPSQSLISDSTSQLGRQCAGFKN*NRSWYF
Trigger: GAAGTACCAGGACCTGTTTCAGTTTTTGAATCCTGC...ACACTGACGTCCCAGCTGCGACGTACTGTCACTGATGAGAGACTGGGAAGGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp TCATCAGTGACAGTACGTCGCAGCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGCAGGATTCAAAAACTaGAACAGGTCCTGGTACTTC +
Preference number: 4 (lower is better)
Translates to: SSVTVRRSWDVSVASENPAGFKN*NRSWYF
Trigger: GAAGTACCAGGACCTGTTTCAGTTTTTGAATCCTGC...TGGATTCTCCGACGCAACACTGACGTCCCAGCTGCGACGTACTGTCACTGATGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp AGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGTGGCCACTTCCACTTTaGACTTGTCCACCAGAACGT +
Preference number: 4 (lower is better)
Translates to: RAGGTSTIIVVWLAFLIWWPLPL*TCPPER
Trigger: ACGTTCTGGTGGACAAGTTCAAAGTGGAAGTGGCCA...CCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS-3UTR TCA 90 bp GCCAGTTCAGTGAGATCTAGGAACCTCAGGATACATCAATCACAGTCAGATAATCTCTGGTGTCTGCCCTaGGCTCAGAGCCCTCGAGGA +
Preference number: 4 (lower is better)
Translates to: ASSVRSRNLRIHQSQSDNLWCLP*AQSPRG
Trigger: TCCTCGAGGGCTCTGAGCTCAGGGCAGACACCAGAG...ATTATCTGACTGTGATTGATGTATCCTGAGGTTCCTAGATCTCACTGAACTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS-3UTR GCA 90 bp CCTTACCATGGCTACTTTGGCCTGAGAAGAAGAAATGATTCAGAACAAGGAAGAGCCCGTGATGATGTCTaGCCGCAGCTGCAGGCACAG +
Preference number: 4 (lower is better)
Translates to: PYHGYFGLRRRNDSEQGRARDDV*PQLQAQ
Trigger: CTGTGCCTGCAGCTGCGGGCAGACATCATCACGGGC...TCTTCCTTGTTCTGAATCATTTCTTCTTCTCAGGCCAAAGTAGCCATGGTAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp CATCTTCTACAATGGCTGAGAGCACCACCTCCCTTTGGATATGGAGTTGGTTATGAGCCCAGTAGGGCATaGGTGACAAAGGAGCATGGC +
Preference number: 4 (lower is better)
Translates to: HLLQWLRAPPPFGYGVGYEPSRA*VTKEHG
Trigger: GCCATGCTCCTTTGTCACGCATGCCCTACTGGGCTC...ATAACCAACTCCATATCCAAAGGGAGGTGGTGCTCTCAGCCATTGTAGAAGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp CTGCCAGCCCCAGCAGCAGTGCAAGGATGCGGTGTTTCCTGTATATATATCTATGAGTCCTTGGCATGGTaGAGGTCTACTCCGTACATG +
Preference number: 4 (lower is better)
Translates to: LPAPAAVQGCGVSCIYIYESLAW*RSTPYM
Trigger: CATGTACGGAGTAGACCTGCACCATGCCAAGGACTC...ATAGATATATATACAGGAAACACCGCATCCTTGCACTGCTGCTGGGGCTGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp TTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTGAGTCCTTGGCATGGTaGAGGTCTACTCCGTACATG +
Preference number: 4 (lower is better)
Translates to: FYNHRGLACVSYLAGERGESLAW*RSTPYM
Trigger: CATGTACGGAGTAGACCTGCACCATGCCAAGGACTC...ACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp CAGAACCAGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCGTTTCTATGTATGATGCTCGATaGAGACCTTCCACAGTCTCT +
Preference number: 4 (lower is better)
Translates to: QNQGGRDFYNHRGLACVSMYDAR*RPSTVS
Trigger: AGAGACTGTGGAAGGTCTGCATCGAGCATCATACAT...AGAAACGCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCTGGTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp GCCAGTTCAGTGAGATCTAGGAACCTCAGGATACATCAATCACAGTCAGATAATGGCCTGGCGAGTCTGTaGCTGGGTCCTCCCACTGTA +
Preference number: 4 (lower is better)
Translates to: ASSVRSRNLRIHQSQSDNGLASL*LGPPTV
Trigger: TACAGTGGGAGGACCCAGGCACAGACTCGCCAGGCC...ATTATCTGACTGTGATTGATGTATCCTGAGGTTCCTAGATCTCACTGAACTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp CAGAACCAGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCGTTTCTACATGGTGTACCGTTTaGTGGAAGAACGCTCAAAGA +
Preference number: 4 (lower is better)
Translates to: QNQGGRDFYNHRGLACVSTWCTV*WKNAQR
Trigger: TCTTTGAGCGTTCTTCCAGCAAACGGTACACCATGT...AGAAACGCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCTGGTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp ATATATATGCTTTTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGCAGCTGGTCACCGTCAGGCCCTaGATCATGGTTCTCGCTGAC +
Preference number: 4 (lower is better)
Translates to: IYMLFPSQSLISDSTSQLVTVRP*IMVLAD
Trigger: GTCAGCGAGAACCATGATGCAGGGCCTGACGGTGAC...CAGCTGCGACGTACTGTCACTGATGAGAGACTGGGAAGGGAAAAGCATATATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp GTTTTCCTTTGCATTCAAGTGGGCCTTAGAGATGCTGGAGAAGAACAAATGGAATCAGCCTCTGACCGTTaGCCCCCAGACTCGCCATCC +
Preference number: 4 (lower is better)
Translates to: VFLCIQVGLRDAGEEQMESASDR*PPDSPS
Trigger: GGATGGCGAGTCTGGGGGGCAACGGTCAGAGGCTGA...TTCCATTTGTTCTTCTCCAGCATCTCTAAGGCCCACTTGAATGCAAAGGAAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp GCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTAATGTTGATGCTGGCCTGGTaGTTCAGCAAGACATCTTCT +
Preference number: 4 (lower is better)
Translates to: AGTSVLRRRIQNEGPFLMLMLAW*FSKTSS
Trigger: AGAAGATGTCTTGCTGAAGCACCAGGCCAGCATCAA...CATTAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp ACAAATGGAATTGCTCGTCTGCTAACTGTAACGTGCAGAACCAGGGCGGGAGGGTTGATGCTGGCCTGGTaGTTCAGCAAGACATCTTCT +
Preference number: 4 (lower is better)
Translates to: TNGIARLLTVTCRTRAGGLMLAW*FSKTSS
Trigger: AGAAGATGTCTTGCTGAAGCACCAGGCCAGCATCAA...CCCTCCCGCCCTGGTTCTGCACGTTACAGTTAGCAGACGAGCAATTCCATTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp CTTTTCTTTTTCTCATTTCAAAGGAGAGTCATCTGCAGTGGCCCTCAGAAGGACCGAGCTCAGGCAGGCTaGGGGAGAAGTCTTCGAAGG +
Preference number: 4 (lower is better)
Translates to: LFFFSFQRRVICSGPQKDRAQAG*GRSLRR
Trigger: CCTTCGAAGACTTCTCCCGCAGCCTGCCTGAGCTCG...GTCCTTCTGAGGGCCACTGCAGATGACTCTCCTTTGAAATGAGAAAAAGAAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp CCCAGCAGCAGTGCAAGGATGCGGTGTTTCCTGTATATATATCTATATCTCTATGCGGAGACTCTGGTCTaGAGTACGGCCTCCGGCTCA +
Preference number: 4 (lower is better)
Translates to: PSSSARMRCFLYIYLYLYAETLV*STASGS
Trigger: TGAGCCGGAGGCCGTACTGCAGACCAGAGTCTCCGC...ATAGAGATATAGATATATATACAGGAAACACCGCATCCTTGCACTGCTGCTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp AGGTTGAAGACAGACAAGACAAACGTCTCTATTCTCTACAAAGAGAAGGATGGGGCGGAGACTCTGGTCTaGAGTACGGCCTCCGGCTCA +
Preference number: 4 (lower is better)
Translates to: RLKTDKTNVSILYKEKDGAETLV*STASGS
Trigger: TGAGCCGGAGGCCGTACTGCAGACCAGAGTCTCCGC...CCCATCCTTCTCTTTGTAGAGAATAGAGACGTTTGTCTTGTCTGTCTTCAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp GCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTAATGAGCATATCAGGATGCTaGAGTTTGGCCTCCTTGATG +
Preference number: 4 (lower is better)
Translates to: AGTSVLRRRIQNEGPFLMSISGC*SLASLM
Trigger: CATCAAGGAGGCCAAACTGCAGCATCCTGATATGCT...CATTAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp GAAGGCCCCTTCTTAATGGTTCTCTGGCTTGGGTTGGACCAGAAATGCCAGGATACCAGCATATCAGGATaGTGCAGTTTGGCCTCCTTG +
Preference number: 4 (lower is better)
Translates to: EGPFLMVLWLGLDQKCQDTSISG*CSLASL
Trigger: CAAGGAGGCCAAACTGCAGCATCCTGATATGCTGGT...ATCCTGGCATTTCTGGTCCAACCCAAGCCAGAGAACCATTAAGAAGGGGCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp GGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTGAGCAAGGGATTATAACCAGCATATCAGGATaGTGCAGTTTGGCCTCCTTG +
Preference number: 4 (lower is better)
Translates to: GLACVSYLAGERGEQGIITSISG*CSLASL
Trigger: CAAGGAGGCCAAACTGCAGCATCCTGATATGCTGGT...TATAATCCCTTGCTCACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp AGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGACCAGCATATCAGGATaGTGCAGTTTGGCCTCCTTG +
Preference number: 4 (lower is better)
Translates to: RAGGTSTIIVVWLAFLIWTSISG*CSLASL
Trigger: CAAGGAGGCCAAACTGCAGCATCCTGATATGCTGGT...CCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp AACCAGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATGGGTTGGACCAGAAATaGCAGGATCTCTTCACAGAG +
Preference number: 4 (lower is better)
Translates to: NQGGRDFYNHRGLACVSYGLDQK*QDLFTE
Trigger: CTCTGTGAAGAGATCCTGGCATTTCTGGTCCAACCC...ATAAGAAACGCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCTGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp CATCTTCTACAATGGCTGAGAGCACCACCTCCCTTTGGATATGGAGTTGGTTATCAGCCCCAGCAGCAGTaGAAGGATGCGGTGTTTCCT +
Preference number: 4 (lower is better)
Translates to: HLLQWLRAPPPFGYGVGYQPQQQ*KDAVFP
Trigger: AGGAAACACCGCATCCTTGCACTGCTGCTGGGGCTG...ATAACCAACTCCATATCCAAAGGGAGGTGGTGCTCTCAGCCATTGTAGAAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp CCACCAGTTCTTCAATTTGTCTGCAAAGGAAATGTAGGTGTTCAGATGTCGGTTGTCAGCCAACTGCTCTaGCAGCCCCAGCAGCAGTGC +
Preference number: 4 (lower is better)
Translates to: PPVLQFVCKGNVGVQMSVVSQLL*QPQQQC
Trigger: GCACTGCTGCTGGGGCTGGCAGAGCAGTTGGCTGAC...AACCGACATCTGAACACCTACATTTCCTTTGCAGACAAATTGAAGAACTGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp AACCAGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTCAGATGTCGGTTGTTaGTGTCAGCCAACTGCTCTG +
Preference number: 4 (lower is better)
Translates to: NQGGRDFYNHRGLACVSYSDVGC*CQPTAL
Trigger: CAGAGCAGTTGGCTGACAGCAACAACCGACATCTGA...ATAAGAAACGCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCTGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp TTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTCATCGTGGTCTGGCTTaGGTTTCTTATTTGGCGGGG +
Preference number: 4 (lower is better)
Translates to: FYNHRGLACVSYLAGERGHRGLA*VSYLAG
Trigger: CCCCGCCAAATAAGAAACGCAAGCCAGACCACGATG...ACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp ACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTAATGGTTCTCCATCGTGGTCTGGCTTaGGTTTCTTATTTGGCGGGG +
Preference number: 4 (lower is better)
Translates to: TSVLRRRIQNEGPFLMVLHRGLA*VSYLAG
Trigger: CCCCGCCAAATAAGAAACGCAAGCCAGACCACGATG...GAGAACCATTAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp AGGAAATGTAGGTGTTCAGATGTCGGTTGTTGCTGTCAGCCAACTGCTCTGCCACATCGTGGTCTGGCTTaGGTTTCTTATTTGGCGGGG +
Preference number: 4 (lower is better)
Translates to: RKCRCSDVGCCCQPTALPHRGLA*VSYLAG
Trigger: CCCCGCCAAATAAGAAACGCAAGCCAGACCACGATG...TGGCAGAGCAGTTGGCTGACAGCAACAACCGACATCTGAACACCTACATTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp CCCTGCCCCAAAGCCAGGTGCAAAATCCACAACAAGGATCCTCCCTCTGAGGTGGCAAGTGTTTTCCTTTaGATTCAAGTGGGCCTTAGA +
Preference number: 4 (lower is better)
Translates to: PCPKARCKIHNKDPPSEVASVFL*IQVGLR
Trigger: TCTAAGGCCCACTTGAATGCAAAGGAAAACACTTGC...CACCTCAGAGGGAGGATCCTTGTTGTGGATTTTGCACCTGGCTTTGGGGCAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp AGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGGAGGAAGGTAGGTTTTaGAGCCCAGTGTCAAGATCC +
Preference number: 4 (lower is better)
Translates to: RAGGTSTIIVVWLAFLIWEEGRF*SPVSRS
Trigger: GGATCTTGACACTGGGCTGCAAAACCTACCTTCCTC...CCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp TCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTGGAGGAAGGTAGGTTTTaGAGCCCAGTGTCAAGATCC +
Preference number: 4 (lower is better)
Translates to: STIIVVWLAFLIWRGKGVEEGRF*SPVSRS
Trigger: GGATCTTGACACTGGGCTGCAAAACCTACCTTCCTC...CACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp TTCAGTGTGCTCAGGACTCCTGGTTCCTGCAAAGATGAGTTCCTAGACCGAAGTCAAAGGAGAGTCATCTaGAGTGGCCCTCAGAAGGAC +
Preference number: 4 (lower is better)
Translates to: FSVLRTPGSCKDEFLDRSQRRVI*SGPQKD
Trigger: GTCCTTCTGAGGGCCACTGCAGATGACTCTCCTTTG...ACTTCGGTCTAGGAACTCATCTTTGCAGGAACCAGGAGTCCTGAGCACACTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp AGGAAATGTAGGTGTTCAGATGTCGGTTGTTGCTGTCAGCCAACTGCTCTGCCACAAAGGAGAGTCATCTaGAGTGGCCCTCAGAAGGAC +
Preference number: 4 (lower is better)
Translates to: RKCRCSDVGCCCQPTALPQRRVI*SGPQKD
Trigger: GTCCTTCTGAGGGCCACTGCAGATGACTCTCCTTTG...TGGCAGAGCAGTTGGCTGACAGCAACAACCGACATCTGAACACCTACATTTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp CCTATGAGCAACATCACCCGTCAGTCTCAGCTTTGTCCTGGGACAGGGGAGGGCAAACCTCCTACAAGCTaGACCTTCATAATGAGAAAC +
Preference number: 4 (lower is better)
Translates to: PMSNITRQSQLCPGTGEGKPPTS*TFIMRN
Trigger: GTTTCTCATTATGAAGGTGCAGCTTGTAGGAGGTTT...GCCCTCCCCTGTCCCAGGACAAAGCTGAGACTGACGGGTGATGTTGCTCATAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp AGGAAATGTAGGTGTTCAGATGTCGGTTGTTGCTGTCAGCCAACTGCTCTGCCATCCTGCTGGGATGGATaGTTCTCATTGGAGTTGGCC +
Preference number: 4 (lower is better)
Translates to: RKCRCSDVGCCCQPTALPSCWDG*FSLELA
Trigger: GGCCAACTCCAATGAGAAGCATCCATCCCAGCAGGA...TGGCAGAGCAGTTGGCTGACAGCAACAACCGACATCTGAACACCTACATTTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000636016.2
CDS-3UTR GCA 90 bp TTTCTTTTTCTCATTTCAAAGGAGAGTCATCTGCAGTGGCCCTCAGAAGGACCAGCAGGCCGCGTGTCCTaGTGGGATGGATGCTTCTCA +
Preference number: 4 (lower is better)
Translates to: FLFLISKESHLQWPSEGPAGRVS*WDGCFS
Trigger: TGAGAAGCATCCATCCCAGCAGGACACGCGGCCTGC...TGGTCCTTCTGAGGGCCACTGCAGATGACTCTCCTTTGAAATGAGAAAAAGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000636016.2
CDS-3UTR GCA 90 bp CCAGCCCCAGCAGCAGTGCAAGGATGCGGTGTTTCCTGTATATATATCTATATCGATGGAGGGAGTGGTTaGTATGAACTCCCTCCCCAC +
Preference number: 4 (lower is better)
Translates to: PAPAAVQGCGVSCIYIYIDGGSG*YELPPH
Trigger: GTGGGGAGGGAGTTCATAGCAACCACTCCCTCCATC...GATATAGATATATATACAGGAAACACCGCATCCTTGCACTGCTGCTGGGGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp CTGCTCTGCCAGCCCCAGCAGCAGTGCAAGGATGCGGTGTTTCCTGTATATATAGGACGACATCTGTGTTaGTTCTTTCTTGCCAAACCC +
Preference number: 4 (lower is better)
Translates to: LLCQPQQQCKDAVFPVYIGRHLC*FFLAKP
Trigger: GGGTTTGGCAAGAAAGAAGCAACACAGATGTCGTCC...TATATATACAGGAAACACCGCATCCTTGCACTGCTGCTGGGGCTGGCAGAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp ACAAATGGAATTGCTCGTCTGCTAACTGTAACGTGCAGAACCAGGGCGGGAGGGGCCCAGAGAAGCAAATaGTATTCTGATTTCCTGCCC +
Preference number: 4 (lower is better)
Translates to: TNGIARLLTVTCRTRAGGAQRSK*YSDFLP
Trigger: GGGCAGGAAATCAGAATAGCATTTGCTTCTCTGGGC...CCCTCCCGCCCTGGTTCTGCACGTTACAGTTAGCAGACGAGCAATTCCATTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp AAGACTGAAAACCAAGGCAAGCCCCGTAGGGAGATAAGGACTAAGCCAGGGACCAGGACTCCTGGTTCCTaGAAAGATGAGTTCCTAGAC +
Preference number: 4 (lower is better)
Translates to: KTENQGKPRREIRTKPGTRTPGS*KDEFLD
Trigger: GTCTAGGAACTCATCTTTGCAGGAACCAGGAGTCCT...GGTCCCTGGCTTAGTCCTTATCTCCCTACGGGGCTTGCCTTGGTTTTCAGTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp CCTATGAGCAACATCACCCGTCAGTCTCAGCTTTGTCCTGGGACAGGGGAGGGCTCTATAAATACCCAATaGTCTGAACCCTCAGGAGAT +
Preference number: 4 (lower is better)
Translates to: PMSNITRQSQLCPGTGEGSINTQ*SEPSGD
Trigger: ATCTCCTGAGGGTTCAGAGCATTGGGTATTTATAGA...GCCCTCCCCTGTCCCAGGACAAAGCTGAGACTGACGGGTGATGTTGCTCATAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS-3UTR GCA 90 bp GAAGGTGTCTTGAACTGGCATTTTGGGGACGACATCTGTGTTGCTTCTTTCTTGTGTGGGCTTCGTCCTTaGTCCTGCTGGAAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: EGVLNWHFGDDICVASFLCGLRP*SCWKQQ
Trigger: CTGCTGCTTCCAGCAGGAGCAAGGACGAAGCCCACA...CAAGAAAGAAGCAACACAGATGTCGTCCCCAAAATGCCAGTTCAAGACACCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS-3UTR CCA 90 bp CTTTTCTTTTTCTCATTTCAAAGGAGAGTCATCTGCAGTGGCCCTCAGAAGGACTTCTGGGGCGATTTCTaGGCCTTGCTGGGCGTGGTC +
Preference number: 4 (lower is better)
Translates to: LFFFSFQRRVICSGPQKDFWGDF*ALLGVV
Trigger: GACCACGCCCAGCAAGGCCCAGAAATCGCCCCAGAA...GTCCTTCTGAGGGCCACTGCAGATGACTCTCCTTTGAAATGAGAAAAAGAAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp TCGTCTGCTAACTGTAACGTGCAGAACCAGGGCGGGAGGGACTTCTACAATCATTTCTTGGCAATCTTCTaGGGCGATTTCTGGGCCTTG +
Preference number: 4 (lower is better)
Translates to: SSANCNVQNQGGRDFYNHFLAIF*GDFWAL
Trigger: CAAGGCCCAGAAATCGCCCCAGAAGATTGCCAAGAA...ATGATTGTAGAAGTCCCTCCCGCCCTGGTTCTGCACGTTACAGTTAGCAGACGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp TTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTAATGGTTCTCTGGCTTGGGTTCTTGGCAATCTTCTaGGGCGATTTCTGGGCCTTG +
Preference number: 4 (lower is better)
Translates to: LRRRIQNEGPFLMVLWLGFLAIF*GDFWAL
Trigger: CAAGGCCCAGAAATCGCCCCAGAAGATTGCCAAGAA...CCCAAGCCAGAGAACCATTAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp TGCTGGAGAAGAACAAATGGAATTGCTCGTCTGCTAACTGTAACGTGCAGAACCAGGTCAAACAGCACCTaGCCCCGGCCATGTTTCTCC +
Preference number: 4 (lower is better)
Translates to: CWRRTNGIARLLTVTCRTRSNST*PRPCFS
Trigger: GGAGAAACATGGCCGGGGCCAGGTGCTGTTTGACCT...GGTTCTGCACGTTACAGTTAGCAGACGAGCAATTCCATTTGTTCTTCTCCAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp CATCTTCTACAATGGCTGAGAGCACCACCTCCCTTTGGATATGGAGTTGGTTATAGGTCAAACAGCACCTaGCCCCGGCCATGTTTCTCC +
Preference number: 4 (lower is better)
Translates to: HLLQWLRAPPPFGYGVGYRSNST*PRPCFS
Trigger: GGAGAAACATGGCCGGGGCCAGGTGCTGTTTGACCT...ATAACCAACTCCATATCCAAAGGGAGGTGGTGCTCTCAGCCATTGTAGAAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp CCAGGATGGTCACCCAGAACTCCTAACCGCCCTCAGGGACTTTTTCCACTATGCGGTCTACTCCGTACATaGAAAGCTTCTTGGCATTCT +
Preference number: 4 (lower is better)
Translates to: PGWSPRTPNRPQGLFPLCGLLRT*KASWHS
Trigger: AGAATGCCAAGAAGCTTTCCATGTACGGAGTAGACC...GCATAGTGGAAAAAGTCCCTGAGGGCGGTTAGGAGTTCTGGGTGACCATCCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp GCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTAATGTGGTGTACCGTTTGCTaGAAGAACGCTCAAAGAAGG +
Preference number: 4 (lower is better)
Translates to: AGTSVLRRRIQNEGPFLMWCTVC*KNAQRR
Trigger: CCTTCTTTGAGCGTTCTTCCAGCAAACGGTACACCA...CATTAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp CCAGCCCCAGCAGCAGTGCAAGGATGCGGTGTTTCCTGTATATATATCTATATCCAGTCTCGATCCCGGTaGATGAGTTTGCTGTTGGGC +
Preference number: 4 (lower is better)
Translates to: PAPAAVQGCGVSCIYIYIQSRSR*MSLLLG
Trigger: GCCCAACAGCAAACTCATCCACCGGGATCGAGACTG...GATATAGATATATATACAGGAAACACCGCATCCTTGCACTGCTGCTGGGGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp CTTTTCTTTTTCTCATTTCAAAGGAGAGTCATCTGCAGTGGCCCTCAGAAGGACTGGGGCCCGGGGACGTaGTGGTTTGACTTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: LFFFSFQRRVICSGPQKDWGPGT*WFDFLL
Trigger: GAGGAGAAAGTCAAACCACCACGTCCCCGGGCCCCA...GTCCTTCTGAGGGCCACTGCAGATGACTCTCCTTTGAAATGAGAAAAAGAAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp ATATATATGCTTTTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGCAGCTGTTCACGGGCTCAAACTaGGGCATATCCGGGGTGGAG +
Preference number: 4 (lower is better)
Translates to: IYMLFPSQSLISDSTSQLFTGSN*GISGVE
Trigger: CTCCACCCCGGATATGCCCCAGTTTGAGCCCGTGAA...CAGCTGCGACGTACTGTCACTGATGAGAGACTGGGAAGGGAAAAGCATATATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp AACCAGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATACAGTTTTGGTGACATaGGTGGTGGTGGAGGTTGAG +
Preference number: 4 (lower is better)
Translates to: NQGGRDFYNHRGLACVSYTVLVT*VVVEVE
Trigger: CTCAACCTCCACCACCACCCATGTCACCAAAACTGT...ATAAGAAACGCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCTGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp AGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGACAGTTTTGGTGACATaGGTGGTGGTGGAGGTTGAG +
Preference number: 4 (lower is better)
Translates to: RAGGTSTIIVVWLAFLIWTVLVT*VVVEVE
Trigger: CTCAACCTCCACCACCACCCATGTCACCAAAACTGT...CCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp TCGTCTGCTAACTGTAACGTGCAGAACCAGGGCGGGAGGGACTTCTACAATCATACAGTTTTGGTGACATaGGTGGTGGTGGAGGTTGAG +
Preference number: 4 (lower is better)
Translates to: SSANCNVQNQGGRDFYNHTVLVT*VVVEVE
Trigger: CTCAACCTCCACCACCACCCATGTCACCAAAACTGT...ATGATTGTAGAAGTCCCTCCCGCCCTGGTTCTGCACGTTACAGTTAGCAGACGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp TCGCAGCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTACAATCATCGTGGTCTaGCTTGCGTTTCTTATTTGG +
Preference number: 4 (lower is better)
Translates to: SQLGRQCCVGESRMKAPSTIIVV*LAFLIW
Trigger: CCAAATAAGAAACGCAAGCCAGACCACGATGATTGT...AGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGCTGCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp TCGCAGCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTCTTCTACAATCATCGTaGTCTGGCTTGCGTTTCTTA +
Preference number: 4 (lower is better)
Translates to: SQLGRQCCVGESRMKAPSLLQSS*SGLRFL
Trigger: TAAGAAACGCAAGCCAGACCACGATGATTGTAGAAG...AGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGCTGCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp GCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTAATGTCCTTTGCATTCAAGTaGGCCTTAGAGATGCTGGAG +
Preference number: 4 (lower is better)
Translates to: AGTSVLRRRIQNEGPFLMSFAFK*ALEMLE
Trigger: CTCCAGCATCTCTAAGGCCCACTTGAATGCAAAGGA...CATTAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp TCATCAGTGACAGTACGTCGCAGCTGGGACGTCAGTGTTGCGTCGGAGAATCCACTACTTCCCTTCCTGTaGCTTCGTTTTCTGTTCTTG +
Preference number: 4 (lower is better)
Translates to: SSVTVRRSWDVSVASENPLLPFL*LRFLFL
Trigger: CAAGAACAGAAAACGAAGCCACAGGAAGGGAAGTAG...TGGATTCTCCGACGCAACACTGACGTCCCAGCTGCGACGTACTGTCACTGATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp AGGTGTATGTCATCACTGACAAGCCAAAGGGACGCATCTAACCTGGGCCGCCTGCTACTTCCCTTCCTGTaGCTTCGTTTTCTGTTCTTG +
Preference number: 4 (lower is better)
Translates to: RCMSSLTSQRDASNLGRLLLPFL*LRFLFL
Trigger: CAAGAACAGAAAACGAAGCCACAGGAAGGGAAGTAG...CAGGCGGCCCAGGTTAGATGCGTCCCTTTGGCTTGTCAGTGATGACATACACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp CATCTTCTACAATGGCTGAGAGCACCACCTCCCTTTGGATATGGAGTTGGTTATGGCCGCGTGTCCTGCTaGGATGGATGCTTCTCATTG +
Preference number: 4 (lower is better)
Translates to: HLLQWLRAPPPFGYGVGYGRVSC*DGCFSL
Trigger: CAATGAGAAGCATCCATCCCAGCAGGACACGCGGCC...ATAACCAACTCCATATCCAAAGGGAGGTGGTGCTCTCAGCCATTGTAGAAGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000636016.2
CDS-3UTR CCA 90 bp GACTTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGACTGTTCTCCATGGTaGTCGATATGGTCTCCGTGG +
Preference number: 4 (lower is better)
Translates to: DFYNHRGLACVSYLAGERDCSPW*SIWSPW
Trigger: CCACGGAGACCATATCGACCACCATGGAGAACAGTC...CCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGAAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp TACGTCGCAGCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCAGGAAAAGGCTTAGCTaGGAATTTTTAGACAGTCAG +
Preference number: 4 (lower is better)
Translates to: YVAAGTSVLRRRIQNEGPRKRLS*EFLDSQ
Trigger: CTGACTGTCTAAAAATTCCCAGCTAAGCCTTTTCCT...GGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGCTGCGACGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp TCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTGCAGAGAAGTAGCTTGTaGCAGACAAGCCTGAGGAAG +
Preference number: 4 (lower is better)
Translates to: STIIVVWLAFLIWRGKGVQRSSL*QTSLRK
Trigger: CTTCCTCAGGCTTGTCTGCCACAAGCTACTTCTCTG...CACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp TCGCAGCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTAAATTCGCAGTGCAGTaGGACATTTTCCCTCATCAA +
Preference number: 4 (lower is better)
Translates to: SQLGRQCCVGESRMKAPSKFAVQ*DIFPHQ
Trigger: TTGATGAGGGAAAATGTCCCACTGCACTGCGAATTT...AGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGCTGCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp TTAATGGTTCTCTGGCTTGGGTTGGACCAGAAATGCCAGGATCTCTTCACAGAGTATGCCCCGATAGGTTaGCGAGAGTGGGGAGATGCT +
Preference number: 4 (lower is better)
Translates to: LMVLWLGLDQKCQDLFTEYAPIG*REWGDA
Trigger: AGCATCTCCCCACTCTCGCCAACCTATCGGGGCATA...CTCTGTGAAGAGATCCTGGCATTTCTGGTCCAACCCAAGCCAGAGAACCATTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp TACACTGAACCCGTCAGCCCCTACTGTGAGCCAACCCACACCCAGAGTCCAGGTATTGTAGAAAGAACCTaGTGTATGGAAAGTGTGCTG +
Preference number: 4 (lower is better)
Translates to: YTEPVSPYCEPTHTQSPGIVERT*CMESVL
Trigger: CAGCACACTTTCCATACACCAGGTTCTTTCTACAAT...ACCTGGACTCTGGGTGTGGGTTGGCTCACAGTAGGGGCTGACGGGTTCAGTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp CATCTTCTACAATGGCTGAGAGCACCACCTCCCTTTGGATATGGAGTTGGTTATGTTCCTAGACCGAAGTaGCCCAGAGAGGATGGAGCC +
Preference number: 4 (lower is better)
Translates to: HLLQWLRAPPPFGYGVGYVPRPK*PREDGA
Trigger: GGCTCCATCCTCTCTGGGCCACTTCGGTCTAGGAAC...ATAACCAACTCCATATCCAAAGGGAGGTGGTGCTCTCAGCCATTGTAGAAGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp CTGCTCTGCCAGCCCCAGCAGCAGTGCAAGGATGCGGTGTTTCCTGTATATATAGTTTCAGGCCAGTCTTaGAATGTGCTTGCAGGATTC +
Preference number: 4 (lower is better)
Translates to: LLCQPQQQCKDAVFPVYIVSGQS*NVLAGF
Trigger: GAATCCTGCAAGCACATTCCAAGACTGGCCTGAAAC...TATATATACAGGAAACACCGCATCCTTGCACTGCTGCTGGGGCTGGCAGAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp CTGCCAGCCCCAGCAGCAGTGCAAGGATGCGGTGTTTCCTGTATATATATCTATTTTTCACGGGCTCATTaGCTTTCTCAGGGGTGCCCT +
Preference number: 4 (lower is better)
Translates to: LPAPAAVQGCGVSCIYIYFSRAH*LSQGCP
Trigger: AGGGCACCCCTGAGAAAGCCAATGAGCCCGTGAAAA...ATAGATATATATACAGGAAACACCGCATCCTTGCACTGCTGCTGGGGCTGGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000628415.2
CDS-3UTR CCA 90 bp TTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTAATGGTTCTCTGGCTTGGGATGTCCTGGGTCCTCTaGGACTCATTGGCTTTCTCA +
Preference number: 4 (lower is better)
Translates to: LRRRIQNEGPFLMVLWLGMSWVL*DSLAFS
Trigger: TGAGAAAGCCAATGAGTCCCAGAGGACCCAGGACAT...CCCAAGCCAGAGAACCATTAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS-3UTR CCA 90 bp GAAGGTGTCTTGAACTGGCATTTTGGGGACGACATCTGTGTTGCTTCTTTCTTGTCTCTCCTCCAGGGGTaGAGGGAGGACTTGGTCTTC +
Preference number: 4 (lower is better)
Translates to: EGVLNWHFGDDICVASFLSLLQG*REDLVF
Trigger: GAAGACCAAGTCCTCCCTCCACCCCTGGAGGAGAGA...CAAGAAAGAAGCAACACAGATGTCGTCCCCAAAATGCCAGTTCAAGACACCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS-3UTR CCA 90 bp ACCAGTTCTTCAATTTGTCTGCAAAGGAAATGTAGGTGTTCAGATGTCGGTTGTAATTCAGCGTCGGCCTaGGCTCACCTCCGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: TSSSICLQRKCRCSDVGCNSASA*AHLREG
Trigger: CCCCTCCCGGAGGTGAGCCCAGGCCGACGCTGAATT...ACAACCGACATCTGAACACCTACATTTCCTTTGCAGACAAATTGAAGAACTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS-3UTR CCA 90 bp AGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGGAAGTTGCCTCTGTCTaGTTTGACTGGCTTCCTGAC +
Preference number: 4 (lower is better)
Translates to: RAGGTSTIIVVWLAFLIWEVASV*FDWLPD
Trigger: GTCAGGAAGCCAGTCAAACCAGACAGAGGCAACTTC...CCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636016.2
3UTR CAA 72 bp GGGGTAATTTCTGGGCACAAGCTCAGAGTTCAGCTGTaGACTGAGAGGGAGGTCTCCAAGCCAAGGTCTTAT +
Preference number: 4 (lower is better)
Translates to: GVISGHKLRVQL*TEREVSKPRSY
Trigger: ATAAGACCTTGGCTTGGAGACCTCCCTCTCAGTCAACAGCTGAACTCTGAGCTTGTGCCCAGAAATTACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp CTTTTCTTTTTCTCATTTCAAAGGAGAGTCATCTGCAGTGGCCCTCAGAAGGACCGAAGCGGAGCTCGCTaGCATAGTTGCCCACATGCT +
Preference number: 4 (lower is better)
Translates to: LFFFSFQRRVICSGPQKDRSGAR*HSCPHA
Trigger: AGCATGTGGGCAACTATGTCAGCGAGCTCCGCTTCG...GTCCTTCTGAGGGCCACTGCAGATGACTCTCCTTTGAAATGAGAAAAAGAAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp CCCAGCAGCAGTGCAAGGATGCGGTGTTTCCTGTATATATATCTATATCTCTATGCCGGTCCCGGTAGATaGGCAGGCCATTGGCACAAA +
Preference number: 4 (lower is better)
Translates to: PSSSARMRCFLYIYLYLYAGPGR*AGHWHK
Trigger: TTTGTGCCAATGGCCTGCTCATCTACCGGGACCGGC...ATAGAGATATAGATATATATACAGGAAACACCGCATCCTTGCACTGCTGCTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp ACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTAATGGTTCTCAGCCGGAAGAATGTATaGTGCTCGATGCAGACCTTC +
Preference number: 4 (lower is better)
Translates to: TSVLRRRIQNEGPFLMVLSRKNV*CSMQTF
Trigger: GAAGGTCTGCATCGAGCATCATACATTCTTCCGGCT...GAGAACCATTAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp AGGAAATGTAGGTGTTCAGATGTCGGTTGTTGCTGTCAGCCAACTGCTCTGCCAATGACAGCAAGACATTaGGAGTTGAGGGTGAGGGGA +
Preference number: 4 (lower is better)
Translates to: RKCRCSDVGCCCQPTALPMTARH*ELRVRG
Trigger: TCCCCTCACCCTCAACTCTCAATGTCTTGCTGTCAT...TGGCAGAGCAGTTGGCTGACAGCAACAACCGACATCTGAACACCTACATTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp TTAATGGTTCTCTGGCTTGGGTTGGACCAGAAATGCCAGGATCTCTTCACAGAGATATGGTCTCCGTGGTaGTGGAGGGAGTGGTTGCTA +
Preference number: 4 (lower is better)
Translates to: LMVLWLGLDQKCQDLFTEIWSPW*WREWLL
Trigger: TAGCAACCACTCCCTCCATCACCACGGAGACCATAT...CTCTGTGAAGAGATCCTGGCATTTCTGGTCCAACCCAAGCCAGAGAACCATTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp TATATATATATGCTTTTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGCAGCCCCCTTCCCGGACTTaGGACTGTTCTCCATGGTGG +
Preference number: 4 (lower is better)
Translates to: YIYMLFPSQSLISDSTSQPPSRT*DCSPWW
Trigger: CCACCATGGAGAACAGTCTCAAGTCCGGGAAGGGGG...CTGCGACGTACTGTCACTGATGAGAGACTGGGAAGGGAAAAGCATATATATATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp TTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTATCTTCTACAATGGCTaGGAGCACCACCTCCCTTTG +
Preference number: 4 (lower is better)
Translates to: FYNHRGLACVSYLAGERGIFYNG*EHHLPL
Trigger: CAAAGGGAGGTGGTGCTCTCAGCCATTGTAGAAGAT...ACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp AACCAGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGCAAATGCAGTTTTaGTCTTTCAGGGTCTGCCCC +
Preference number: 4 (lower is better)
Translates to: NQGGRDFYNHRGLACVSYLQMQF*SFRVCP
Trigger: GGGGCAGACCCTGAAAGATCAAAACTGCATTTGCAA...ATAAGAAACGCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCTGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp TTAATGGTTCTCTGGCTTGGGTTGGACCAGAAATGCCAGGATCTCTTCACAGAGGCAATGCCAAGCTTGTaGTGGGAGCTTCTTGAAGGG +
Preference number: 4 (lower is better)
Translates to: LMVLWLGLDQKCQDLFTEAMPSL*WELLEG
Trigger: CCCTTCAAGAAGCTCCCATCACAAGCTTGGCATTGC...CTCTGTGAAGAGATCCTGGCATTTCTGGTCCAACCCAAGCCAGAGAACCATTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp TTCAGTGTGCTCAGGACTCCTGGTTCCTGCAAAGATGAGTTCCTAGACCGAAGTTCAAGGGGCACTTTCTaGGCTCAGAGAAGTAGCTTG +
Preference number: 4 (lower is better)
Translates to: FSVLRTPGSCKDEFLDRSSRGTF*AQRSSL
Trigger: CAAGCTACTTCTCTGAGCTCAGAAAGTGCCCCTTGA...ACTTCGGTCTAGGAACTCATCTTTGCAGGAACCAGGAGTCCTGAGCACACTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp ATATATATGCTTTTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGCAGCTGATTCTGCTGCCCCGCTaGACTTCCCATTTGCCCAGA +
Preference number: 4 (lower is better)
Translates to: IYMLFPSQSLISDSTSQLILLPR*TSHLPR
Trigger: TCTGGGCAAATGGGAAGTTCAGCGGGGCAGCAGAAT...CAGCTGCGACGTACTGTCACTGATGAGAGACTGGGAAGGGAAAAGCATATATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp TTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTTGGTTCCTGCAAAGATaGGTTCCTAGACCGAAGTGG +
Preference number: 4 (lower is better)
Translates to: FYNHRGLACVSYLAGERGWFLQR*VPRPKW
Trigger: CCACTTCGGTCTAGGAACTCATCTTTGCAGGAACCA...ACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp GTTTTCCTTTGCATTCAAGTGGGCCTTAGAGATGCTGGAGAAGAACAAATGGAAGCATCCGCGGGATGGTaGTTTCCCCAAACCCTGGTG +
Preference number: 4 (lower is better)
Translates to: VFLCIQVGLRDAGEEQMEASAGW*FPQTLV
Trigger: CACCAGGGTTTGGGGAAATCACCATCCCGCGGATGC...TTCCATTTGTTCTTCTCCAGCATCTCTAAGGCCCACTTGAATGCAAAGGAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp AAGACTGAAAACCAAGGCAAGCCCCGTAGGGAGATAAGGACTAAGCCAGGGACCGCAGGATTCAAAAACTaGAACAGGTCCTGGTACTTC +
Preference number: 4 (lower is better)
Translates to: KTENQGKPRREIRTKPGTAGFKN*NRSWYF
Trigger: GAAGTACCAGGACCTGTTTCAGTTTTTGAATCCTGC...GGTCCCTGGCTTAGTCCTTATCTCCCTACGGGGCTTGCCTTGGTTTTCAGTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp AACCAGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATCAGGTTCTACCTCATTaGTCCTCCCCAAGAAAACCA +
Preference number: 4 (lower is better)
Translates to: NQGGRDFYNHRGLACVSYQVLPH*SSPRKP
Trigger: TGGTTTTCTTGGGGAGGATCAATGAGGTAGAACCTG...ATAAGAAACGCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCTGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000628415.2
CDS-3UTR TCA 90 bp CCAGCCCCAGCAGCAGTGCAAGGATGCGGTGTTTCCTGTATATATATCTATATCGCTGCGAGGCTTTTCTaGGTGAACACTTCCAAGCCT +
Preference number: 4 (lower is better)
Translates to: PAPAAVQGCGVSCIYIYIAARLF*VNTSKP
Trigger: AGGCTTGGAAGTGTTCACTCAGAAAAGCCTCGCAGC...GATATAGATATATATACAGGAAACACCGCATCCTTGCACTGCTGCTGGGGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS-3UTR TCA 90 bp GCATTCAAGTGGGCCTTAGAGATGCTGGAGAAGAACAAATGGAATTGCTCGTCTGCCTTCCTCCCCCACTaGCTCAAAGTCTTCAGGACT +
Preference number: 4 (lower is better)
Translates to: AFKWALEMLEKNKWNCSSAFLPH*LKVFRT
Trigger: AGTCCTGAAGACTTTGAGTCAGTGGGGGAGGAAGGC...AGACGAGCAATTCCATTTGTTCTTCTCCAGCATCTCTAAGGCCCACTTGAATGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS-3UTR TCA 90 bp TCGTCTGCTAACTGTAACGTGCAGAACCAGGGCGGGAGGGACTTCTACAATCATATGATCACCTCCATGTaGAGAAATGCTGAAGCCTCG +
Preference number: 4 (lower is better)
Translates to: SSANCNVQNQGGRDFYNHMITSM*RNAEAS
Trigger: CGAGGCTTCAGCATTTCTTCACATGGAGGTGATCAT...ATGATTGTAGAAGTCCCTCCCGCCCTGGTTCTGCACGTTACAGTTAGCAGACGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS-3UTR TCA 90 bp CCTTACCATGGCTACTTTGGCCTGAGAAGAAGAAATGATTCAGAACAAGGAAGACTCCCTTCGCTTCCCTaGAGGGAACCCAAACCCCAG +
Preference number: 4 (lower is better)
Translates to: PYHGYFGLRRRNDSEQGRLPSLP*REPKPQ
Trigger: CTGGGGTTTGGGTTCCCTTCAGGGAAGCGAAGGGAG...TCTTCCTTGTTCTGAATCATTTCTTCTTCTCAGGCCAAAGTAGCCATGGTAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS-3UTR GCA 90 bp ATCTATATATATATGCTTTTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGGCCCGTGATGATGTCTaGCCGCAGCTGCAGGCACAG +
Preference number: 4 (lower is better)
Translates to: IYIYMLFPSQSLISDSTSARDDV*PQLQAQ
Trigger: CTGTGCCTGCAGCTGCGGGCAGACATCATCACGGGC...CGACGTACTGTCACTGATGAGAGACTGGGAAGGGAAAAGCATATATATATAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp CTGCCAGCCCCAGCAGCAGTGCAAGGATGCGGTGTTTCCTGTATATATATCTATATTGTGCTCTCAAATTaGTCATACTCCCCAGGCCGG +
Preference number: 4 (lower is better)
Translates to: LPAPAAVQGCGVSCIYIYIVLSN*SYSPGR
Trigger: CCGGCCTGGGGAGTATGAGCAATTTGAGAGCACAAT...ATAGATATATATACAGGAAACACCGCATCCTTGCACTGCTGCTGGGGCTGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp ACCAGTTCTTCAATTTGTCTGCAAAGGAAATGTAGGTGTTCAGATGTCGGTTGTGGCCTGGCGAGTCTGTaGCTGGGTCCTCCCACTGTA +
Preference number: 4 (lower is better)
Translates to: TSSSICLQRKCRCSDVGCGLASL*LGPPTV
Trigger: TACAGTGGGAGGACCCAGGCACAGACTCGCCAGGCC...ACAACCGACATCTGAACACCTACATTTCCTTTGCAGACAAATTGAAGAACTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp TTTCTTTTTCTCATTTCAAAGGAGAGTCATCTGCAGTGGCCCTCAGAAGGACCAACGCTCAAAGAAGGGTaGAGGCCGGTCAATGAGGGC +
Preference number: 4 (lower is better)
Translates to: FLFLISKESHLQWPSEGPTLKEG*RPVNEG
Trigger: GCCCTCATTGACCGGCCTGCACCCTTCTTTGAGCGT...TGGTCCTTCTGAGGGCCACTGCAGATGACTCTCCTTTGAAATGAGAAAAAGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp GCATTCAAGTGGGCCTTAGAGATGCTGGAGAAGAACAAATGGAATTGCTCGTCTCTGCTCCATCAAGGCTaGGGGACATGGTGTACCGTT +
Preference number: 4 (lower is better)
Translates to: AFKWALEMLEKNKWNCSSLLHQG*GTWCTV
Trigger: AACGGTACACCATGTCCCGCAGCCTTGATGGAGCAG...AGACGAGCAATTCCATTTGTTCTTCTCCAGCATCTCTAAGGCCCACTTGAATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp CTTTTCTTTTTCTCATTTCAAAGGAGAGTCATCTGCAGTGGCCCTCAGAAGGACGCCCTCCCTCAGCCCTaGTCTCTCATTGGCTTTCTC +
Preference number: 4 (lower is better)
Translates to: LFFFSFQRRVICSGPQKDALPQP*SLIGFL
Trigger: GAGAAAGCCAATGAGAGAGCAGGGCTGAGGGAGGGC...GTCCTTCTGAGGGCCACTGCAGATGACTCTCCTTTGAAATGAGAAAAAGAAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
CDS-3UTR GCA 90 bp GCCAGTTCAGTGAGATCTAGGAACCTCAGGATACATCAATCACAGTCAGATAATTGGGATCATGGCAGCTaGCCCCTTCCCGGACTTGAG +
Preference number: 4 (lower is better)
Translates to: ASSVRSRNLRIHQSQSDNWDHGS*PLPGLE
Trigger: CTCAAGTCCGGGAAGGGGGCAGCTGCCATGATCCCA...ATTATCTGACTGTGATTGATGTATCCTGAGGTTCCTAGATCTCACTGAACTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp TCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTGAGCATATCAGGATGCTaGAGTTTGGCCTCCTTGATG +
Preference number: 4 (lower is better)
Translates to: STIIVVWLAFLIWRGKGVSISGC*SLASLM
Trigger: CATCAAGGAGGCCAAACTGCAGCATCCTGATATGCT...CACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp GACTTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGACCAGCATATCAGGATaGTGCAGTTTGGCCTCCTTG +
Preference number: 4 (lower is better)
Translates to: DFYNHRGLACVSYLAGERTSISG*CSLASL
Trigger: CAAGGAGGCCAAACTGCAGCATCCTGATATGCTGGT...CCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGAAGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp TTCAGTGTGCTCAGGACTCCTGGTTCCTGCAAAGATGAGTTCCTAGACCGAAGTACCAGCATATCAGGATaGTGCAGTTTGGCCTCCTTG +
Preference number: 4 (lower is better)
Translates to: FSVLRTPGSCKDEFLDRSTSISG*CSLASL
Trigger: CAAGGAGGCCAAACTGCAGCATCCTGATATGCTGGT...ACTTCGGTCTAGGAACTCATCTTTGCAGGAACCAGGAGTCCTGAGCACACTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp ACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTAATGGTTCTCGGGTTGGACCAGAAATaGCAGGATCTCTTCACAGAG +
Preference number: 4 (lower is better)
Translates to: TSVLRRRIQNEGPFLMVLGLDQK*QDLFTE
Trigger: CTCTGTGAAGAGATCCTGGCATTTCTGGTCCAACCC...GAGAACCATTAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp ACCAGTTCTTCAATTTGTCTGCAAAGGAAATGTAGGTGTTCAGATGTCGGTTGTGTCAGCCAACTGCTCTaGCAGCCCCAGCAGCAGTGC +
Preference number: 4 (lower is better)
Translates to: TSSSICLQRKCRCSDVGCVSQLL*QPQQQC
Trigger: GCACTGCTGCTGGGGCTGGCAGAGCAGTTGGCTGAC...ACAACCGACATCTGAACACCTACATTTCCTTTGCAGACAAATTGAAGAACTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp TCATCAGTGACAGTACGTCGCAGCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGCAAGTGTTTTCCTTTaGATTCAAGTGGGCCTTAGA +
Preference number: 4 (lower is better)
Translates to: SSVTVRRSWDVSVASENPASVFL*IQVGLR
Trigger: TCTAAGGCCCACTTGAATGCAAAGGAAAACACTTGC...TGGATTCTCCGACGCAACACTGACGTCCCAGCTGCGACGTACTGTCACTGATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp TTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTGAGGAAGGTAGGTTTTaGAGCCCAGTGTCAAGATCC +
Preference number: 4 (lower is better)
Translates to: FYNHRGLACVSYLAGERGEEGRF*SPVSRS
Trigger: GGATCTTGACACTGGGCTGCAAAACCTACCTTCCTC...ACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp CTGCCAGCCCCAGCAGCAGTGCAAGGATGCGGTGTTTCCTGTATATATATCTATGAGGAAGGTAGGTTTTaGAGCCCAGTGTCAAGATCC +
Preference number: 4 (lower is better)
Translates to: LPAPAAVQGCGVSCIYIYEEGRF*SPVSRS
Trigger: GGATCTTGACACTGGGCTGCAAAACCTACCTTCCTC...ATAGATATATATACAGGAAACACCGCATCCTTGCACTGCTGCTGGGGCTGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp GGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTGAGCAAGGGATTATAGTGTTGCTTCTTTCTTaGCAAACCCACACCTCTCCA +
Preference number: 4 (lower is better)
Translates to: GLACVSYLAGERGEQGIIVLLLS*QTHTSP
Trigger: TGGAGAGGTGTGGGTTTGGCAAGAAAGAAGCAACAC...TATAATCCCTTGCTCACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp GAAGGCCCCTTCTTAATGGTTCTCTGGCTTGGGTTGGACCAGAAATGCCAGGATGGACGACATCTGTGTTaGTTCTTTCTTGCCAAACCC +
Preference number: 4 (lower is better)
Translates to: EGPFLMVLWLGLDQKCQDGRHLC*FFLAKP
Trigger: GGGTTTGGCAAGAAAGAAGCAACACAGATGTCGTCC...ATCCTGGCATTTCTGGTCCAACCCAAGCCAGAGAACCATTAAGAAGGGGCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp ACAAATGGAATTGCTCGTCTGCTAACTGTAACGTGCAGAACCAGGGCGGGAGGGGGAGGGCTTTGCAAATaGAGTTTTGATCTTTCAGGG +
Preference number: 4 (lower is better)
Translates to: TNGIARLLTVTCRTRAGGGGLCK*SFDLSG
Trigger: CCCTGAAAGATCAAAACTGCATTTGCAAAGCCCTCC...CCCTCCCGCCCTGGTTCTGCACGTTACAGTTAGCAGACGAGCAATTCCATTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp TCCCACCTTCTTCAGCCTGAGAATAGTCCCTGGCACAAGCAGGTAATCAGTAAATGTGGCAGAGAGCAATaGCAAGCTTGTGATGGGAGC +
Preference number: 4 (lower is better)
Translates to: SHLLQPENSPWHKQVISKCGREQ*QACDGS
Trigger: GCTCCCATCACAAGCTTGGCATTGCTCTCTGCCACA...TTTACTGATTACCTGCTTGTGCCAGGGACTATTCTCAGGCTGAAGAAGGTGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp TGCTGGAGAAGAACAAATGGAATTGCTCGTCTGCTAACTGTAACGTGCAGAACCGCTATTCTGATTTCCTaGCCTGCCTCAGGCCAGCAC +
Preference number: 4 (lower is better)
Translates to: CWRRTNGIARLLTVTCRTAILIS*PASGQH
Trigger: GTGCTGGCCTGAGGCAGGGCAGGAAATCAGAATAGC...GGTTCTGCACGTTACAGTTAGCAGACGAGCAATTCCATTTGTTCTTCTCCAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp TCGTCTGCTAACTGTAACGTGCAGAACCAGGGCGGGAGGGACTTCTACAATCATGCCCAGAGAAGCAAATaGTATTCTGATTTCCTGCCC +
Preference number: 4 (lower is better)
Translates to: SSANCNVQNQGGRDFYNHAQRSK*YSDFLP
Trigger: GGGCAGGAAATCAGAATAGCATTTGCTTCTCTGGGC...ATGATTGTAGAAGTCCCTCCCGCCCTGGTTCTGCACGTTACAGTTAGCAGACGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp GCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTAATGGCTGAACTTCCCATTTaGCCAGAGAAGCAAATGCTA +
Preference number: 4 (lower is better)
Translates to: AGTSVLRRRIQNEGPFLMAELPI*PEKQML
Trigger: TAGCATTTGCTTCTCTGGGCAAATGGGAAGTTCAGC...CATTAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp AGGAAATGTAGGTGTTCAGATGTCGGTTGTTGCTGTCAGCCAACTGCTCTGCCAGTATGGAAAGTGTGCTaGTACACTCAGGGGGAGTTG +
Preference number: 4 (lower is better)
Translates to: RKCRCSDVGCCCQPTALPVWKVC*YTQGEL
Trigger: CAACTCCCCCTGAGTGTAGCAGCACACTTTCCATAC...TGGCAGAGCAGTTGGCTGACAGCAACAACCGACATCTGAACACCTACATTTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp ACTCTCAAGAAGGGCAGGAAGAAGGTTCTGTGGCTTTTCCACCAGGATTGTAGAGGTGTATGGAAAGTGTaGTGCTACACTCAGGGGGAG +
Preference number: 4 (lower is better)
Translates to: TLKKGRKKVLWLFHQDCRGVWKV*CYTQGE
Trigger: CTCCCCCTGAGTGTAGCAGCACACTTTCCATACACC...TCTACAATCCTGGTGGAAAAGCCACAGAACCTTCTTCCTGCCCTTCTTGAGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp TTCAGTGTGCTCAGGACTCCTGGTTCCTGCAAAGATGAGTTCCTAGACCGAAGTGGACTTTTTCCACTATaGTACATGGCCTCCTGGGTG +
Preference number: 4 (lower is better)
Translates to: FSVLRTPGSCKDEFLDRSGLFPL*YMASWV
Trigger: CACCCAGGAGGCCATGTAGCATAGTGGAAAAAGTCC...ACTTCGGTCTAGGAACTCATCTTTGCAGGAACCAGGAGTCCTGAGCACACTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp AAATGTAGGTGTTCAGATGTCGGTTGTTGCTGTCAGCCAACTGCTCTGCCAGCCATCTCCCCACACATTTaGCCAAATGTCAGGGAAAGG +
Preference number: 4 (lower is better)
Translates to: KCRCSDVGCCCQPTALPAISPHI*PNVRER
Trigger: CCTTTCCCTGACATTTGGGCAAATGTGTGGGGAGAT...GGCTGGCAGAGCAGTTGGCTGACAGCAACAACCGACATCTGAACACCTACATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373946.7
CDS-3UTR GCA 90 bp TCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTGATTTGGAAGGGACCTTaGTTCACCCTCACTCATTCG +
Preference number: 4 (lower is better)
Translates to: STIIVVWLAFLIWRGKGVIWKGP*FTLTHS
Trigger: CGAATGAGTGAGGGTGAAGCAAGGTCCCTTCCAAAT...CACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS-3UTR GCA 90 bp CCACCAGTTCTTCAATTTGTCTGCAAAGGAAATGTAGGTGTTCAGATGTCGGTTAGCGTACTCCGCTGCTaGTCTGCTTGTCCCACGGGT +
Preference number: 4 (lower is better)
Translates to: PPVLQFVCKGNVGVQMSVSVLRC*SACPTG
Trigger: ACCCGTGGGACAAGCAGAGCAGCAGCGGAGTACGCT...AACCGACATCTGAACACCTACATTTCCTTTGCAGACAAATTGAAGAACTGGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS-3UTR GCA 90 bp TGCTGGAGAAGAACAAATGGAATTGCTCGTCTGCTAACTGTAACGTGCAGAACCCAAACCCCAGAGGTATaGGCCCCTCAGCTTCTTCAG +
Preference number: 4 (lower is better)
Translates to: CWRRTNGIARLLTVTCRTQTPEV*APQLLQ
Trigger: CTGAAGAAGCTGAGGGGCGCATACCTCTGGGGTTTG...GGTTCTGCACGTTACAGTTAGCAGACGAGCAATTCCATTTGTTCTTCTCCAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS-3UTR CCA 90 bp GTTTTCCTTTGCATTCAAGTGGGCCTTAGAGATGCTGGAGAAGAACAAATGGAATTCTGGGGCGATTTCTaGGCCTTGCTGGGCGTGGTC +
Preference number: 4 (lower is better)
Translates to: VFLCIQVGLRDAGEEQMEFWGDF*ALLGVV
Trigger: GACCACGCCCAGCAAGGCCCAGAAATCGCCCCAGAA...TTCCATTTGTTCTTCTCCAGCATCTCTAAGGCCCACTTGAATGCAAAGGAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp CTGCCAGCCCCAGCAGCAGTGCAAGGATGCGGTGTTTCCTGTATATATATCTATTCCAGCCAGTTCTTCTaGCTGTCAGCATCACAGAAG +
Preference number: 4 (lower is better)
Translates to: LPAPAAVQGCGVSCIYIYSSQFF*LSASQK
Trigger: CTTCTGTGATGCTGACAGCCAGAAGAACTGGCTGGA...ATAGATATATATACAGGAAACACCGCATCCTTGCACTGCTGCTGGGGCTGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp TGCTGGAGAAGAACAAATGGAATTGCTCGTCTGCTAACTGTAACGTGCAGAACCTGCCCTCAGAGTCCTTaGCATGGTGCAGGTCTACTC +
Preference number: 4 (lower is better)
Translates to: CWRRTNGIARLLTVTCRTCPQSP*HGAGLL
Trigger: GAGTAGACCTGCACCATGCCAAGGACTCTGAGGGCA...GGTTCTGCACGTTACAGTTAGCAGACGAGCAATTCCATTTGTTCTTCTCCAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp ATCTATATATATATGCTTTTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGTGGCGAGTCTGTGCCTaGGTCCTCCCACTGTACCGG +
Preference number: 4 (lower is better)
Translates to: IYIYMLFPSQSLISDSTSWRVCA*VLPLYR
Trigger: CCGGTACAGTGGGAGGACCCAGGCACAGACTCGCCA...CGACGTACTGTCACTGATGAGAGACTGGGAAGGGAAAAGCATATATATATAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp TCTTCAATTTGTCTGCAAAGGAAATGTAGGTGTTCAGATGTCGGTTGTTGCTGTTGGCGAGTCTGTGCCTaGGTCCTCCCACTGTACCGG +
Preference number: 4 (lower is better)
Translates to: SSICLQRKCRCSDVGCCCWRVCA*VLPLYR
Trigger: CCGGTACAGTGGGAGGACCCAGGCACAGACTCGCCA...ACAGCAACAACCGACATCTGAACACCTACATTTCCTTTGCAGACAAATTGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp TTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTAATGGTTCTCTGGCTTGGGTGGTGTACCGTTTGCTaGAAGAACGCTCAAAGAAGG +
Preference number: 4 (lower is better)
Translates to: LRRRIQNEGPFLMVLWLGWCTVC*KNAQRR
Trigger: CCTTCTTTGAGCGTTCTTCCAGCAAACGGTACACCA...CCCAAGCCAGAGAACCATTAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp AACCAGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTGGTGTACCGTTTGCTaGAAGAACGCTCAAAGAAGG +
Preference number: 4 (lower is better)
Translates to: NQGGRDFYNHRGLACVSYWCTVC*KNAQRR
Trigger: CCTTCTTTGAGCGTTCTTCCAGCAAACGGTACACCA...ATAAGAAACGCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCTGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp CTTTTCTTTTTCTCATTTCAAAGGAGAGTCATCTGCAGTGGCCCTCAGAAGGACTCAGGCCCTGCATCATaGTTCTCGCTGACCGAGGCT +
Preference number: 4 (lower is better)
Translates to: LFFFSFQRRVICSGPQKDSGPAS*FSLTEA
Trigger: AGCCTCGGTCAGCGAGAACCATGATGCAGGGCCTGA...GTCCTTCTGAGGGCCACTGCAGATGACTCTCCTTTGAAATGAGAAAAAGAAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp GGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTGAGCAAGGGATTATATCATTGATGCTGGCCTaGTGCTTCAGCAAGACATCT +
Preference number: 4 (lower is better)
Translates to: GLACVSYLAGERGEQGIISLMLA*CFSKTS
Trigger: AGATGTCTTGCTGAAGCACCAGGCCAGCATCAATGA...TATAATCCCTTGCTCACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp AGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGTCATTGATGCTGGCCTaGTGCTTCAGCAAGACATCT +
Preference number: 4 (lower is better)
Translates to: RAGGTSTIIVVWLAFLIWSLMLA*CFSKTS
Trigger: AGATGTCTTGCTGAAGCACCAGGCCAGCATCAATGA...CCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp CCACCAGTTCTTCAATTTGTCTGCAAAGGAAATGTAGGTGTTCAGATGTCGGTTTGGGGCCCGGGGACGTaGTGGTTTGACTTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: PPVLQFVCKGNVGVQMSVWGPGT*WFDFLL
Trigger: GAGGAGAAAGTCAAACCACCACGTCCCCGGGCCCCA...AACCGACATCTGAACACCTACATTTCCTTTGCAGACAAATTGAAGAACTGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp TATATATATATGCTTTTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGCAGACCGTGTCCCTCTCCTaGTCCTGGTCCTCATCGCCT +
Preference number: 4 (lower is better)
Translates to: YIYMLFPSQSLISDSTSQTVSLS*SWSSSP
Trigger: AGGCGATGAGGACCAGGACCAGGAGAGGGACACGGT...CTGCGACGTACTGTCACTGATGAGAGACTGGGAAGGGAAAAGCATATATATATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp TATATATATATGCTTTTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGCAGCCAGACTCATCATCCTaGCTGGGGGCCCCCTTGTTG +
Preference number: 4 (lower is better)
Translates to: YIYMLFPSQSLISDSTSQPDSSS*LGAPLL
Trigger: CAACAAGGGGGCCCCCAGCCAGGATGATGAGTCTGG...CTGCGACGTACTGTCACTGATGAGAGACTGGGAAGGGAAAAGCATATATATATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp GCCAGTTCAGTGAGATCTAGGAACCTCAGGATACATCAATCACAGTCAGATAATGAGAACGGATTTCCGTaGCCACCGTCTGTGGGCCTG +
Preference number: 4 (lower is better)
Translates to: ASSVRSRNLRIHQSQSDNENGFP*PPSVGL
Trigger: CAGGCCCACAGACGGTGGCCACGGAAATCCGTTCTC...ATTATCTGACTGTGATTGATGTATCCTGAGGTTCCTAGATCTCACTGAACTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp CTGCCAGCCCCAGCAGCAGTGCAAGGATGCGGTGTTTCCTGTATATATATCTATACAGTTTTGGTGACATaGGTGGTGGTGGAGGTTGAG +
Preference number: 4 (lower is better)
Translates to: LPAPAAVQGCGVSCIYIYTVLVT*VVVEVE
Trigger: CTCAACCTCCACCACCACCCATGTCACCAAAACTGT...ATAGATATATATACAGGAAACACCGCATCCTTGCACTGCTGCTGGGGCTGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp GACTTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGACAGTTTTGGTGACATaGGTGGTGGTGGAGGTTGAG +
Preference number: 4 (lower is better)
Translates to: DFYNHRGLACVSYLAGERTVLVT*VVVEVE
Trigger: CTCAACCTCCACCACCACCCATGTCACCAAAACTGT...CCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGAAGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp ACTCTCAAGAAGGGCAGGAAGAAGGTTCTGTGGCTTTTCCACCAGGATTGTAGACTTGTCCCTCTCCTCTaGGGATGGGTCTGTTTCTCT +
Preference number: 4 (lower is better)
Translates to: TLKKGRKKVLWLFHQDCRLVPLL*GWVCFS
Trigger: AGAGAAACAGACCCATCCCCAGAGGAGAGGGACAAG...TCTACAATCCTGGTGGAAAAGCCACAGAACCTTCTTCCTGCCCTTCTTGAGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp AGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGAATGGTTCTCTGGCTTaGGTTGGACCAGAAATGCCA +
Preference number: 4 (lower is better)
Translates to: RAGGTSTIIVVWLAFLIWNGSLA*VGPEMP
Trigger: TGGCATTTCTGGTCCAACCCAAGCCAGAGAACCATT...CCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp CCAGGATGGTCACCCAGAACTCCTAACCGCCCTCAGGGACTTTTTCCACTATGCCTTCTACAATCATCGTaGTCTGGCTTGCGTTTCTTA +
Preference number: 4 (lower is better)
Translates to: PGWSPRTPNRPQGLFPLCLLQSS*SGLRFL
Trigger: TAAGAAACGCAAGCCAGACCACGATGATTGTAGAAG...GCATAGTGGAAAAAGTCCCTGAGGGCGGTTAGGAGTTCTGGGTGACCATCCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp AAATGTAGGTGTTCAGATGTCGGTTGTTGCTGTCAGCCAACTGCTCTGCCAGCCTCCTTTGCATTCAAGTaGGCCTTAGAGATGCTGGAG +
Preference number: 4 (lower is better)
Translates to: KCRCSDVGCCCQPTALPASFAFK*ALEMLE
Trigger: CTCCAGCATCTCTAAGGCCCACTTGAATGCAAAGGA...GGCTGGCAGAGCAGTTGGCTGACAGCAACAACCGACATCTGAACACCTACATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp GCCAGTTCAGTGAGATCTAGGAACCTCAGGATACATCAATCACAGTCAGATAATGCTTCTCATTGGAGTTaGCCTCTGGGTGGCCGTGGC +
Preference number: 4 (lower is better)
Translates to: ASSVRSRNLRIHQSQSDNASHWS*PLGGRG
Trigger: GCCACGGCCACCCAGAGGCCAACTCCAATGAGAAGC...ATTATCTGACTGTGATTGATGTATCCTGAGGTTCCTAGATCTCACTGAACTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000636016.2
CDS-3UTR CCA 90 bp TGCTGGAGAAGAACAAATGGAATTGCTCGTCTGCTAACTGTAACGTGCAGAACCGCTTGTGTCTCGGCGTaGTTTCCTGCTCCGGCTTTA +
Preference number: 4 (lower is better)
Translates to: CWRRTNGIARLLTVTCRTACVSA*FPAPAL
Trigger: TAAAGCCGGAGCAGGAAACCACGCCGAGACACAAGC...GGTTCTGCACGTTACAGTTAGCAGACGAGCAATTCCATTTGTTCTTCTCCAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000636016.2
CDS-3UTR CCA 90 bp TCCCACCTTCTTCAGCCTGAGAATAGTCCCTGGCACAAGCAGGTAATCAGTAAAGACTGTTCTCCATGGTaGTCGATATGGTCTCCGTGG +
Preference number: 4 (lower is better)
Translates to: SHLLQPENSPWHKQVISKDCSPW*SIWSPW
Trigger: CCACGGAGACCATATCGACCACCATGGAGAACAGTC...TTTACTGATTACCTGCTTGTGCCAGGGACTATTCTCAGGCTGAAGAAGGTGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000636016.2
CDS-3UTR CCA 90 bp CCCTGCCCCAAAGCCAGGTGCAAAATCCACAACAAGGATCCTCCCTCTGAGGTGACCTCCCTTTGGATATaGAGTTGGTTATTACAATGG +
Preference number: 4 (lower is better)
Translates to: PCPKARCKIHNKDPPSEVTSLWI*SWLLQW
Trigger: CCATTGTAATAACCAACTCCATATCCAAAGGGAGGT...CACCTCAGAGGGAGGATCCTTGTTGTGGATTTTGCACCTGGCTTTGGGGCAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp GCAGCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTAAGCACCACCTCCCTTTaGATATGGAGTTGGTTATTA +
Preference number: 4 (lower is better)
Translates to: AAGTSVLRRRIQNEGPFLSTTSL*IWSWLL
Trigger: TAATAACCAACTCCATATCCAAAGGGAGGTGGTGCT...TAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp TTTCTTTTTCTCATTTCAAAGGAGAGTCATCTGCAGTGGCCCTCAGAAGGACCAGTCTCAGCTTTGTCCTaGGACAGGGGAGGGCTTTGC +
Preference number: 4 (lower is better)
Translates to: FLFLISKESHLQWPSEGPVSALS*DRGGLC
Trigger: GCAAAGCCCTCCCCTGTCCCAGGACAAAGCTGAGAC...TGGTCCTTCTGAGGGCCACTGCAGATGACTCTCCTTTGAAATGAGAAAAAGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp AATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTGAGCAACTTGAAGGGTTCCTGTaGTCTTGGGGTAATTTCTGG +
Preference number: 4 (lower is better)
Translates to: NHRGLACVSYLAGERGEQLEGFL*SWGNFW
Trigger: CCAGAAATTACCCCAAGACCACAGGAACCCTTCAAG...TTGCTCACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp AGGAAATGTAGGTGTTCAGATGTCGGTTGTTGCTGTCAGCCAACTGCTCTGCCACAGAGAAGTAGCTTGTaGCAGACAAGCCTGAGGAAG +
Preference number: 4 (lower is better)
Translates to: RKCRCSDVGCCCQPTALPQRSSL*QTSLRK
Trigger: CTTCCTCAGGCTTGTCTGCCACAAGCTACTTCTCTG...TGGCAGAGCAGTTGGCTGACAGCAACAACCGACATCTGAACACCTACATTTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp CCAGCCCCAGCAGCAGTGCAAGGATGCGGTGTTTCCTGTATATATATCTATATCATAGGTTGGCGAGAGTaGGGAGATGCTCTCAGATGG +
Preference number: 4 (lower is better)
Translates to: PAPAAVQGCGVSCIYIYIIGWRE*GDALRW
Trigger: CCATCTGAGAGCATCTCCCCACTCTCGCCAACCTAT...GATATAGATATATATACAGGAAACACCGCATCCTTGCACTGCTGCTGGGGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp GCATTCAAGTGGGCCTTAGAGATGCTGGAGAAGAACAAATGGAATTGCTCGTCTTATGCCCCGATAGGTTaGCGAGAGTGGGGAGATGCT +
Preference number: 4 (lower is better)
Translates to: AFKWALEMLEKNKWNCSSYAPIG*REWGDA
Trigger: AGCATCTCCCCACTCTCGCCAACCTATCGGGGCATA...AGACGAGCAATTCCATTTGTTCTTCTCCAGCATCTCTAAGGCCCACTTGAATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp AGGAAATGTAGGTGTTCAGATGTCGGTTGTTGCTGTCAGCCAACTGCTCTGCCAGATTTCCCCAAACCCTaGTGGCCCATAAACTCCACA +
Preference number: 4 (lower is better)
Translates to: RKCRCSDVGCCCQPTALPDFPKP*WPINST
Trigger: TGTGGAGTTTATGGGCCACCAGGGTTTGGGGAAATC...TGGCAGAGCAGTTGGCTGACAGCAACAACCGACATCTGAACACCTACATTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp CCTCCTACAAGCTGCACCTTCATAATGAGAAACCATAAGCATACAATGTCTACTTCCCCTCCTCCCTCGTaGCACTGCCTGCATCTCCGT +
Preference number: 4 (lower is better)
Translates to: PPTSCTFIMRNHKHTMSTSPPPS*HCLHLR
Trigger: ACGGAGATGCAGGCAGTGCCACGAGGGAGGAGGGGA...AGTAGACATTGTATGCTTATGGTTTCTCATTATGAAGGTGCAGCTTGTAGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp TTAATGGTTCTCTGGCTTGGGTTGGACCAGAAATGCCAGGATCTCTTCACAGAGTTCCACTATGCTACATaGCCTCCTGGGTGGAGAGGT +
Preference number: 4 (lower is better)
Translates to: LMVLWLGLDQKCQDLFTEFHYAT*PPGWRG
Trigger: ACCTCTCCACCCAGGAGGCCATGTAGCATAGTGGAA...CTCTGTGAAGAGATCCTGGCATTTCTGGTCCAACCCAAGCCAGAGAACCATTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp CCAGCCCCAGCAGCAGTGCAAGGATGCGGTGTTTCCTGTATATATATCTATATCTTCCACTATGCTACATaGCCTCCTGGGTGGAGAGGT +
Preference number: 4 (lower is better)
Translates to: PAPAAVQGCGVSCIYIYIFHYAT*PPGWRG
Trigger: ACCTCTCCACCCAGGAGGCCATGTAGCATAGTGGAA...GATATAGATATATATACAGGAAACACCGCATCCTTGCACTGCTGCTGGGGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp AGGTGTATGTCATCACTGACAAGCCAAAGGGACGCATCTAACCTGGGCCGCCTGACCCTGGAGAGCATCTaGTTCTTTCTGCTTATTTTG +
Preference number: 4 (lower is better)
Translates to: RCMSSLTSQRDASNLGRLTLESI*FFLLIL
Trigger: CAAAATAAGCAGAAAGAACCAGATGCTCTCCAGGGT...CAGGCGGCCCAGGTTAGATGCGTCCCTTTGGCTTGTCAGTGATGACATACACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp CAGAACCAGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCGTTTCTACCCTGGAGAGCATCTaGTTCTTTCTGCTTATTTTG +
Preference number: 4 (lower is better)
Translates to: QNQGGRDFYNHRGLACVSTLESI*FFLLIL
Trigger: CAAAATAAGCAGAAAGAACCAGATGCTCTCCAGGGT...AGAAACGCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCTGGTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp AACCAGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATGTTTCAGGCCAGTCTTaGAATGTGCTTGCAGGATTC +
Preference number: 4 (lower is better)
Translates to: NQGGRDFYNHRGLACVSYVSGQS*NVLAGF
Trigger: GAATCCTGCAAGCACATTCCAAGACTGGCCTGAAAC...ATAAGAAACGCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCTGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp CCAGCCCCAGCAGCAGTGCAAGGATGCGGTGTTTCCTGTATATATATCTATATCGCACTCCCATCAACCTaGGTGTTATCCATAGCGGAG +
Preference number: 4 (lower is better)
Translates to: PAPAAVQGCGVSCIYIYIALPST*VLSIAE
Trigger: CTCCGCTATGGATAACACCCAGGTTGATGGGAGTGC...GATATAGATATATATACAGGAAACACCGCATCCTTGCACTGCTGCTGGGGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373946.7
ENST00000636016.2
CDS-3UTR CCA 90 bp TTAATGGTTCTCTGGCTTGGGTTGGACCAGAAATGCCAGGATCTCTTCACAGAGCCAGAGGTATCACTGTaGAATGTGTGGCTTTGGGGC +
Preference number: 4 (lower is better)
Translates to: LMVLWLGLDQKCQDLFTEPEVSL*NVWLWG
Trigger: GCCCCAAAGCCACACATTCCACAGTGATACCTCTGG...CTCTGTGAAGAGATCCTGGCATTTCTGGTCCAACCCAAGCCAGAGAACCATTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS-3UTR CCA 90 bp CCTCCTACAAGCTGCACCTTCATAATGAGAAACCATAAGCATACAATGTCTACTTGCTGGCCTGGTCCCTaGAGCAGTGGGTCTCCCACA +
Preference number: 4 (lower is better)
Translates to: PPTSCTFIMRNHKHTMSTCWPGP*SSGSPT
Trigger: TGTGGGAGACCCACTGCTCCAGGGACCAGGCCAGCA...AGTAGACATTGTATGCTTATGGTTTCTCATTATGAAGGTGCAGCTTGTAGGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS-3UTR TCA 90 bp ACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTAATGGTTCTCACAGGTAGTATCTTGTaGTGTCTTCTGTCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: TSVLRRRIQNEGPFLMVLTGSIL*CLLSAG
Trigger: CCCAGCTGACAGAAGACATCACAAGATACTACCTGT...GAGAACCATTAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp ACCAGTTCTTCAATTTGTCTGCAAAGGAAATGTAGGTGTTCAGATGTCGGTTGTCCAGTAGGGCATGCGTaGCAAAGGAGCATGGCAGCC +
Preference number: 4 (lower is better)
Translates to: TSSSICLQRKCRCSDVGCPVGHA*QRSMAA
Trigger: GGCTGCCATGCTCCTTTGTCACGCATGCCCTACTGG...ACAACCGACATCTGAACACCTACATTTCCTTTGCAGACAAATTGAAGAACTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp CCTTACCATGGCTACTTTGGCCTGAGAAGAAGAAATGATTCAGAACAAGGAAGACGAAGCGGAGCTCGCTaGCATAGTTGCCCACATGCT +
Preference number: 4 (lower is better)
Translates to: PYHGYFGLRRRNDSEQGRRSGAR*HSCPHA
Trigger: AGCATGTGGGCAACTATGTCAGCGAGCTCCGCTTCG...TCTTCCTTGTTCTGAATCATTTCTTCTTCTCAGGCCAAAGTAGCCATGGTAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp CCTCCTACAAGCTGCACCTTCATAATGAGAAACCATAAGCATACAATGTCTACTGCCGGTCCCGGTAGATaGGCAGGCCATTGGCACAAA +
Preference number: 4 (lower is better)
Translates to: PPTSCTFIMRNHKHTMSTAGPGR*AGHWHK
Trigger: TTTGTGCCAATGGCCTGCTCATCTACCGGGACCGGC...AGTAGACATTGTATGCTTATGGTTTCTCATTATGAAGGTGCAGCTTGTAGGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp ACTCTCAAGAAGGGCAGGAAGAAGGTTCTGTGGCTTTTCCACCAGGATTGTAGACCCCAGGCCGGATCTTaGTATAGAAGTTACTCCTCT +
Preference number: 4 (lower is better)
Translates to: TLKKGRKKVLWLFHQDCRPQAGS*YRSYSS
Trigger: AGAGGAGTAACTTCTATATCAAGATCCGGCCTGGGG...TCTACAATCCTGGTGGAAAAGCCACAGAACCTTCTTCCTGCCCTTCTTGAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp TCTTCAATTTGTCTGCAAAGGAAATGTAGGTGTTCAGATGTCGGTTGTTGCTGTGGGGACGTGGTGGTTTaGCTTTCTCCTCGGAGCCCT +
Preference number: 4 (lower is better)
Translates to: SSICLQRKCRCSDVGCCCGDVVV*LSPRSP
Trigger: AGGGCTCCGAGGAGAAAGTCAAACCACCACGTCCCC...ACAGCAACAACCGACATCTGAACACCTACATTTCCTTTGCAGACAAATTGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp CCCAGCAGCAGTGCAAGGATGCGGTGTTTCCTGTATATATATCTATATCTCTATGCCAGGGCCTGGTCTTaGTCGACATCTTCATCCCCA +
Preference number: 4 (lower is better)
Translates to: PSSSARMRCFLYIYLYLYARAWS*STSSSP
Trigger: TGGGGATGAAGATGTCGATCAAGACCAGGCCCTGGC...ATAGAGATATAGATATATATACAGGAAACACCGCATCCTTGCACTGCTGCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp TTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTTCGGAGAATCCAGAATaGAGGCCCCTTCTTAATGGT +
Preference number: 4 (lower is better)
Translates to: FYNHRGLACVSYLAGERGSENPE*RPLLNG
Trigger: ACCATTAAGAAGGGGCCTTCATTCTGGATTCTCCGA...ACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp CTGCCAGCCCCAGCAGCAGTGCAAGGATGCGGTGTTTCCTGTATATATATCTATTCGGAGAATCCAGAATaGAGGCCCCTTCTTAATGGT +
Preference number: 4 (lower is better)
Translates to: LPAPAAVQGCGVSCIYIYSENPE*RPLLNG
Trigger: ACCATTAAGAAGGGGCCTTCATTCTGGATTCTCCGA...ATAGATATATATACAGGAAACACCGCATCCTTGCACTGCTGCTGGGGCTGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp CCACCAGTTCTTCAATTTGTCTGCAAAGGAAATGTAGGTGTTCAGATGTCGGTTCCAGTCTCTCATCAGTaGCAGTACGTCGCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: PPVLQFVCKGNVGVQMSVPVSHQ*QYVAAG
Trigger: CCCAGCTGCGACGTACTGTCACTGATGAGAGACTGG...AACCGACATCTGAACACCTACATTTCCTTTGCAGACAAATTGAAGAACTGGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp TCCCACCTTCTTCAGCCTGAGAATAGTCCCTGGCACAAGCAGGTAATCAGTAAAATGACAGCAAGACATTaGGAGTTGAGGGTGAGGGGA +
Preference number: 4 (lower is better)
Translates to: SHLLQPENSPWHKQVISKMTARH*ELRVRG
Trigger: TCCCCTCACCCTCAACTCTCAATGTCTTGCTGTCAT...TTTACTGATTACCTGCTTGTGCCAGGGACTATTCTCAGGCTGAAGAAGGTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp TTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTAATGGTTCTCTGGCTTGGGAGCCGAGACAGAAAATaGCAGCAAGACATTGAGAGT +
Preference number: 4 (lower is better)
Translates to: LRRRIQNEGPFLMVLWLGSRDRK*QQDIES
Trigger: ACTCTCAATGTCTTGCTGTCATTTTCTGTCTCGGCT...CCCAAGCCAGAGAACCATTAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp TCGTCTGCTAACTGTAACGTGCAGAACCAGGGCGGGAGGGACTTCTACAATCATAGCCGAGACAGAAAATaGCAGCAAGACATTGAGAGT +
Preference number: 4 (lower is better)
Translates to: SSANCNVQNQGGRDFYNHSRDRK*QQDIES
Trigger: ACTCTCAATGTCTTGCTGTCATTTTCTGTCTCGGCT...ATGATTGTAGAAGTCCCTCCCGCCCTGGTTCTGCACGTTACAGTTAGCAGACGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp ATATATATGCTTTTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGCAGCTGATATGGTCTCCGTGGTaGTGGAGGGAGTGGTTGCTA +
Preference number: 4 (lower is better)
Translates to: IYMLFPSQSLISDSTSQLIWSPW*WREWLL
Trigger: TAGCAACCACTCCCTCCATCACCACGGAGACCATAT...CAGCTGCGACGTACTGTCACTGATGAGAGACTGGGAAGGGAAAAGCATATATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp ATATATATGCTTTTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGCAGCTGGTGATGGGAGCTTCTTaGAGGGTTCCTGTGGTCTTG +
Preference number: 4 (lower is better)
Translates to: IYMLFPSQSLISDSTSQLVMGAS*RVPVVL
Trigger: CAAGACCACAGGAACCCTTCAAGAAGCTCCCATCAC...CAGCTGCGACGTACTGTCACTGATGAGAGACTGGGAAGGGAAAAGCATATATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp TCCCACCTTCTTCAGCCTGAGAATAGTCCCTGGCACAAGCAGGTAATCAGTAAAGGTGTATGTCATCACTaGCAAGCCAAAGGGACGCAT +
Preference number: 4 (lower is better)
Translates to: SHLLQPENSPWHKQVISKGVCHH*QAKGTH
Trigger: ATGCGTCCCTTTGGCTTGTCAGTGATGACATACACC...TTTACTGATTACCTGCTTGTGCCAGGGACTATTCTCAGGCTGAAGAAGGTGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp TTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTAAGCAAATGCTATTCTaGTTTCCTGCCCTGCCTCAG +
Preference number: 4 (lower is better)
Translates to: FYNHRGLACVSYLAGERGKQMLF*FPALPQ
Trigger: CTGAGGCAGGGCAGGAAATCAGAATAGCATTTGCTT...ACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp ATCTATATATATATGCTTTTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGCAGGGGGAATGCCACTaGTTCTGCTGCCCCGCTGAA +
Preference number: 4 (lower is better)
Translates to: IYIYMLFPSQSLISDSTSQGECH*FCCPAE
Trigger: TTCAGCGGGGCAGCAGAATCAGTGGCATTCCCCCTG...CGACGTACTGTCACTGATGAGAGACTGGGAAGGGAAAAGCATATATATATAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp ACCAGTTCTTCAATTTGTCTGCAAAGGAAATGTAGGTGTTCAGATGTCGGTTGTCAGGGGGAATGCCACTaGTTCTGCTGCCCCGCTGAA +
Preference number: 4 (lower is better)
Translates to: TSSSICLQRKCRCSDVGCQGECH*FCCPAE
Trigger: TTCAGCGGGGCAGCAGAATCAGTGGCATTCCCCCTG...ACAACCGACATCTGAACACCTACATTTCCTTTGCAGACAAATTGAAGAACTGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp GCATTCAAGTGGGCCTTAGAGATGCTGGAGAAGAACAAATGGAATTGCTCGTCTCATGTGAAGAAATGCTaGAGCCTCGCGGTCCTTCAG +
Preference number: 4 (lower is better)
Translates to: AFKWALEMLEKNKWNCSSHVKKC*SLAVLQ
Trigger: CTGAAGGACCGCGAGGCTTCAGCATTTCTTCACATG...AGACGAGCAATTCCATTTGTTCTTCTCCAGCATCTCTAAGGCCCACTTGAATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS-3UTR GCA 90 bp GAAGGTGTCTTGAACTGGCATTTTGGGGACGACATCTGTGTTGCTTCTTTCTTGGGGCTACTCCGGATCTaGTTCTTGATCTCCTTGGAG +
Preference number: 4 (lower is better)
Translates to: EGVLNWHFGDDICVASFLGLLRI*FLISLE
Trigger: CTCCAAGGAGATCAAGAAGCAGATCCGGAGTAGCCC...CAAGAAAGAAGCAACACAGATGTCGTCCCCAAAATGCCAGTTCAAGACACCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp ATATATATGCTTTTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGCAGCTGGAGTCCTTGGCATGGTaGAGGTCTACTCCGTACATG +
Preference number: 4 (lower is better)
Translates to: IYMLFPSQSLISDSTSQLESLAW*RSTPYM
Trigger: CATGTACGGAGTAGACCTGCACCATGCCAAGGACTC...CAGCTGCGACGTACTGTCACTGATGAGAGACTGGGAAGGGAAAAGCATATATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp GCATTCAAGTGGGCCTTAGAGATGCTGGAGAAGAACAAATGGAATTGCTCGTCTGAGTCCTTGGCATGGTaGAGGTCTACTCCGTACATG +
Preference number: 4 (lower is better)
Translates to: AFKWALEMLEKNKWNCSSESLAW*RSTPYM
Trigger: CATGTACGGAGTAGACCTGCACCATGCCAAGGACTC...AGACGAGCAATTCCATTTGTTCTTCTCCAGCATCTCTAAGGCCCACTTGAATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp CCAGCCCCAGCAGCAGTGCAAGGATGCGGTGTTTCCTGTATATATATCTATATCATTGTGCTCTCAAATTaGTCATACTCCCCAGGCCGG +
Preference number: 4 (lower is better)
Translates to: PAPAAVQGCGVSCIYIYIIVLSN*SYSPGR
Trigger: CCGGCCTGGGGAGTATGAGCAATTTGAGAGCACAAT...GATATAGATATATATACAGGAAACACCGCATCCTTGCACTGCTGCTGGGGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp GGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTGAGCAAGGGATTATAATGTATGATGCTCGATaGAGACCTTCCACAGTCTCT +
Preference number: 4 (lower is better)
Translates to: GLACVSYLAGERGEQGIIMYDAR*RPSTVS
Trigger: AGAGACTGTGGAAGGTCTGCATCGAGCATCATACAT...TATAATCCCTTGCTCACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp AAATGTAGGTGTTCAGATGTCGGTTGTTGCTGTCAGCCAACTGCTCTGCCAGCCATGTATGATGCTCGATaGAGACCTTCCACAGTCTCT +
Preference number: 4 (lower is better)
Translates to: KCRCSDVGCCCQPTALPAMYDAR*RPSTVS
Trigger: AGAGACTGTGGAAGGTCTGCATCGAGCATCATACAT...GGCTGGCAGAGCAGTTGGCTGACAGCAACAACCGACATCTGAACACCTACATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp AGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGATGTATGATGCTCGATaGAGACCTTCCACAGTCTCT +
Preference number: 4 (lower is better)
Translates to: RAGGTSTIIVVWLAFLIWMYDAR*RPSTVS
Trigger: AGAGACTGTGGAAGGTCTGCATCGAGCATCATACAT...CCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp AGGTTGAAGACAGACAAGACAAACGTCTCTATTCTCTACAAAGAGAAGGATGGGACGCTCAAAGAAGGGTaGAGGCCGGTCAATGAGGGC +
Preference number: 4 (lower is better)
Translates to: RLKTDKTNVSILYKEKDGTLKEG*RPVNEG
Trigger: GCCCTCATTGACCGGCCTGCACCCTTCTTTGAGCGT...CCCATCCTTCTCTTTGTAGAGAATAGAGACGTTTGTCTTGTCTGTCTTCAACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp TCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTGACATGGTGTACCGTTTaGTGGAAGAACGCTCAAAGA +
Preference number: 4 (lower is better)
Translates to: STIIVVWLAFLIWRGKGVTWCTV*WKNAQR
Trigger: TCTTTGAGCGTTCTTCCAGCAAACGGTACACCATGT...CACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp CCACCATCTTCTACAATGGCTGAGAGCACCACCTCCCTTTGGATATGGAGTTGGACATGGTGTACCGTTTaGTGGAAGAACGCTCAAAGA +
Preference number: 4 (lower is better)
Translates to: PPSSTMAESTTSLWIWSWTWCTV*WKNAQR
Trigger: TCTTTGAGCGTTCTTCCAGCAAACGGTACACCATGT...CCAACTCCATATCCAAAGGGAGGTGGTGCTCTCAGCCATTGTAGAAGATGGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp TTTCTTTTTCTCATTTCAAAGGAGAGTCATCTGCAGTGGCCCTCAGAAGGACCACTGCTCCATCAAGGCTaGGGGACATGGTGTACCGTT +
Preference number: 4 (lower is better)
Translates to: FLFLISKESHLQWPSEGPLLHQG*GTWCTV
Trigger: AACGGTACACCATGTCCCGCAGCCTTGATGGAGCAG...TGGTCCTTCTGAGGGCCACTGCAGATGACTCTCCTTTGAAATGAGAAAAAGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp TCTTCAATTTGTCTGCAAAGGAAATGTAGGTGTTCAGATGTCGGTTGTTGCTGTTGGGCGGGAGAACTCTaGTCCATCAAGGCTGCGGGA +
Preference number: 4 (lower is better)
Translates to: SSICLQRKCRCSDVGCCCWAGEL*SIKAAG
Trigger: TCCCGCAGCCTTGATGGAGCAGAGTTCTCCCGCCCA...ACAGCAACAACCGACATCTGAACACCTACATTTCCTTTGCAGACAAATTGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp GACTTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGTTGATGCTGGCCTGGTaGTTCAGCAAGACATCTTCT +
Preference number: 4 (lower is better)
Translates to: DFYNHRGLACVSYLAGERLMLAW*FSKTSS
Trigger: AGAAGATGTCTTGCTGAAGCACCAGGCCAGCATCAA...CCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGAAGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp TCTTCAATTTGTCTGCAAAGGAAATGTAGGTGTTCAGATGTCGGTTGTTGCTGTCGAGCTCAGGCAGGCTaGGGGAGAAGTCTTCGAAGG +
Preference number: 4 (lower is better)
Translates to: SSICLQRKCRCSDVGCCCRAQAG*GRSLRR
Trigger: CCTTCGAAGACTTCTCCCGCAGCCTGCCTGAGCTCG...ACAGCAACAACCGACATCTGAACACCTACATTTCCTTTGCAGACAAATTGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp ACTCTCAAGAAGGGCAGGAAGAAGGTTCTGTGGCTTTTCCACCAGGATTGTAGAGGGTTGGACCAGAAATaGCAGGATCTCTTCACAGAG +
Preference number: 4 (lower is better)
Translates to: TLKKGRKKVLWLFHQDCRGLDQK*QDLFTE
Trigger: CTCTGTGAAGAGATCCTGGCATTTCTGGTCCAACCC...TCTACAATCCTGGTGGAAAAGCCACAGAACCTTCTTCCTGCCCTTCTTGAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp TCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTGGCAGCAGTGCAAGGATaGGGTGTTTCCTGTATATAT +
Preference number: 4 (lower is better)
Translates to: STIIVVWLAFLIWRGKGVAAVQG*GVSCIY
Trigger: ATATATACAGGAAACACCGCATCCTTGCACTGCTGC...CACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp TTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTAATGGTTCTCTGGCTTGGGGCAGCAGTGCAAGGATaGGGTGTTTCCTGTATATAT +
Preference number: 4 (lower is better)
Translates to: LRRRIQNEGPFLMVLWLGAAVQG*GVSCIY
Trigger: ATATATACAGGAAACACCGCATCCTTGCACTGCTGC...CCCAAGCCAGAGAACCATTAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp AACCAGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATGCAGCAGTGCAAGGATaGGGTGTTTCCTGTATATAT +
Preference number: 4 (lower is better)
Translates to: NQGGRDFYNHRGLACVSYAAVQG*GVSCIY
Trigger: ATATATACAGGAAACACCGCATCCTTGCACTGCTGC...ATAAGAAACGCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCTGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp AAATGTAGGTGTTCAGATGTCGGTTGTTGCTGTCAGCCAACTGCTCTGCCAGCCGCAGCAGTGCAAGGATaGGGTGTTTCCTGTATATAT +
Preference number: 4 (lower is better)
Translates to: KCRCSDVGCCCQPTALPAAAVQG*GVSCIY
Trigger: ATATATACAGGAAACACCGCATCCTTGCACTGCTGC...GGCTGGCAGAGCAGTTGGCTGACAGCAACAACCGACATCTGAACACCTACATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp GTTTTCCTTTGCATTCAAGTGGGCCTTAGAGATGCTGGAGAAGAACAAATGGAACTGCTAACTGTAACGTaGAGAACCAGGGCGGGAGGG +
Preference number: 4 (lower is better)
Translates to: VFLCIQVGLRDAGEEQMELLTVT*RTRAGG
Trigger: CCCTCCCGCCCTGGTTCTGCACGTTACAGTTAGCAG...TTCCATTTGTTCTTCTCCAGCATCTCTAAGGCCCACTTGAATGCAAAGGAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp CCCAGCAGCAGTGCAAGGATGCGGTGTTTCCTGTATATATATCTATATCTCTATCTGCTAACTGTAACGTaGAGAACCAGGGCGGGAGGG +
Preference number: 4 (lower is better)
Translates to: PSSSARMRCFLYIYLYLYLLTVT*RTRAGG
Trigger: CCCTCCCGCCCTGGTTCTGCACGTTACAGTTAGCAG...ATAGAGATATAGATATATATACAGGAAACACCGCATCCTTGCACTGCTGCTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp TCGCAGCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTAAGAACAAATGGAATTaGTCGTCTGCTAACTGTAAC +
Preference number: 4 (lower is better)
Translates to: SQLGRQCCVGESRMKAPSKNKWN*SSANCN
Trigger: GTTACAGTTAGCAGACGAGCAATTCCATTTGTTCTT...AGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGCTGCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp AGGAAATGTAGGTGTTCAGATGTCGGTTGTTGCTGTCAGCCAACTGCTCTGCCATTGTCTAAGAACTCCTaGTTGTGTCTCGGCGTGGTT +
Preference number: 4 (lower is better)
Translates to: RKCRCSDVGCCCQPTALPLSKNS*LCLGVV
Trigger: AACCACGCCGAGACACAAGCAGGAGTTCTTAGACAA...TGGCAGAGCAGTTGGCTGACAGCAACAACCGACATCTGAACACCTACATTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000636016.2
CDS-3UTR GCA 90 bp TTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTGTGTTGCTTCTTTCTTaGCAAACCCACACCTCTCCA +
Preference number: 4 (lower is better)
Translates to: FYNHRGLACVSYLAGERGVLLLS*QTHTSP
Trigger: TGGAGAGGTGTGGGTTTGGCAAGAAAGAAGCAACAC...ACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp GCATTCAAGTGGGCCTTAGAGATGCTGGAGAAGAACAAATGGAATTGCTCGTCTTGTGGCAGAGAGCAATaGCAAGCTTGTGATGGGAGC +
Preference number: 4 (lower is better)
Translates to: AFKWALEMLEKNKWNCSSCGREQ*QACDGS
Trigger: GCTCCCATCACAAGCTTGGCATTGCTCTCTGCCACA...AGACGAGCAATTCCATTTGTTCTTCTCCAGCATCTCTAAGGCCCACTTGAATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp ATATATATGCTTTTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGCAGCTGGGTGTATGGAAAGTGTaGTGCTACACTCAGGGGGAG +
Preference number: 4 (lower is better)
Translates to: IYMLFPSQSLISDSTSQLGVWKV*CYTQGE
Trigger: CTCCCCCTGAGTGTAGCAGCACACTTTCCATACACC...CAGCTGCGACGTACTGTCACTGATGAGAGACTGGGAAGGGAAAAGCATATATAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp AGGAAATGTAGGTGTTCAGATGTCGGTTGTTGCTGTCAGCCAACTGCTCTGCCAAGGACTCCTGGTTCCTaGAAAGATGAGTTCCTAGAC +
Preference number: 4 (lower is better)
Translates to: RKCRCSDVGCCCQPTALPRTPGS*KDEFLD
Trigger: GTCTAGGAACTCATCTTTGCAGGAACCAGGAGTCCT...TGGCAGAGCAGTTGGCTGACAGCAACAACCGACATCTGAACACCTACATTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp TCTTCAATTTGTCTGCAAAGGAAATGTAGGTGTTCAGATGTCGGTTGTTGCTGTCCTCCCTCGTGGCACTaGCTGCATCTCCGTAGAAGG +
Preference number: 4 (lower is better)
Translates to: SSICLQRKCRCSDVGCCCPPSWH*LHLRRR
Trigger: CCTTCTACGGAGATGCAGGCAGTGCCACGAGGGAGG...ACAGCAACAACCGACATCTGAACACCTACATTTCCTTTGCAGACAAATTGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp AAGACTGAAAACCAAGGCAAGCCCCGTAGGGAGATAAGGACTAAGCCAGGGACCGCATCTGGTTCTTTCTaGTTATTTTGCAAGTCGGGA +
Preference number: 4 (lower is better)
Translates to: KTENQGKPRREIRTKPGTASGSF*LFCKSG
Trigger: TCCCGACTTGCAAAATAAGCAGAAAGAACCAGATGC...GGTCCCTGGCTTAGTCCTTATCTCCCTACGGGGCTTGCCTTGGTTTTCAGTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp TTAATGGTTCTCTGGCTTGGGTTGGACCAGAAATGCCAGGATCTCTTCACAGAGGCCTGCCTTTCTTCCTaGTGCATGGTGGTCACTTTT +
Preference number: 4 (lower is better)
Translates to: LMVLWLGLDQKCQDLFTEACLSS*CMVVTF
Trigger: AAAAGTGACCACCATGCAGCAGGAAGAAAGGCAGGC...CTCTGTGAAGAGATCCTGGCATTTCTGGTCCAACCCAAGCCAGAGAACCATTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS-3UTR GCA 90 bp GTTTTCCTTTGCATTCAAGTGGGCCTTAGAGATGCTGGAGAAGAACAAATGGAAGCGGTTCCTGATGGTTaGCTCTCTGGTGTCTGCCCT +
Preference number: 4 (lower is better)
Translates to: VFLCIQVGLRDAGEEQMEAVPDG*LSGVCP
Trigger: AGGGCAGACACCAGAGAGGCAACCATCAGGAACCGC...TTCCATTTGTTCTTCTCCAGCATCTCTAAGGCCCACTTGAATGCAAAGGAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS-3UTR CCA 90 bp GCCAGTTCAGTGAGATCTAGGAACCTCAGGATACATCAATCACAGTCAGATAATAGGTCAAACAGCACCTaGCCCCGGCCATGTTTCTCC +
Preference number: 4 (lower is better)
Translates to: ASSVRSRNLRIHQSQSDNRSNST*PRPCFS
Trigger: GGAGAAACATGGCCGGGGCCAGGTGCTGTTTGACCT...ATTATCTGACTGTGATTGATGTATCCTGAGGTTCCTAGATCTCACTGAACTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp TATATATATATGCTTTTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGCAGCGTGACAAAGGAGCATaGCAGCCGGCCCGTGATGAT +
Preference number: 4 (lower is better)
Translates to: YIYMLFPSQSLISDSTSQRDKGA*QPARDD
Trigger: ATCATCACGGGCCGGCTGCCATGCTCCTTTGTCACG...CTGCGACGTACTGTCACTGATGAGAGACTGGGAAGGGAAAAGCATATATATATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp GAAGGCCCCTTCTTAATGGTTCTCTGGCTTGGGTTGGACCAGAAATGCCAGGATGGTCTACTCCGTACATaGAAAGCTTCTTGGCATTCT +
Preference number: 4 (lower is better)
Translates to: EGPFLMVLWLGLDQKCQDGLLRT*KASWHS
Trigger: AGAATGCCAAGAAGCTTTCCATGTACGGAGTAGACC...ATCCTGGCATTTCTGGTCCAACCCAAGCCAGAGAACCATTAAGAAGGGGCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp GCATTCAAGTGGGCCTTAGAGATGCTGGAGAAGAACAAATGGAATTGCTCGTCTCTCTTGGCTGACCGGTaGTTTGGGAGCTTAAAGCCA +
Preference number: 4 (lower is better)
Translates to: AFKWALEMLEKNKWNCSSLLADR*FGSLKP
Trigger: TGGCTTTAAGCTCCCAAACCACCGGTCAGCCAAGAG...AGACGAGCAATTCCATTTGTTCTTCTCCAGCATCTCTAAGGCCCACTTGAATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp CATCTTCTACAATGGCTGAGAGCACCACCTCCCTTTGGATATGGAGTTGGTTATCTCCTTGATCTTGGTTaGAGTCCTGACCTCTCCCTC +
Preference number: 4 (lower is better)
Translates to: HLLQWLRAPPPFGYGVGYLLDLG*SPDLSL
Trigger: GAGGGAGAGGTCAGGACTCCAACCAAGATCAAGGAG...ATAACCAACTCCATATCCAAAGGGAGGTGGTGCTCTCAGCCATTGTAGAAGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp ATCTATATATATATGCTTTTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGGGCCCGGGGACGTGGTaGTTTGACTTTCTCCTCGGA +
Preference number: 4 (lower is better)
Translates to: IYIYMLFPSQSLISDSTSGPGTW*FDFLLG
Trigger: TCCGAGGAGAAAGTCAAACCACCACGTCCCCGGGCC...CGACGTACTGTCACTGATGAGAGACTGGGAAGGGAAAAGCATATATATATAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp CCTCCTACAAGCTGCACCTTCATAATGAGAAACCATAAGCATACAATGTCTACTTGGGGCCCGGGGACGTaGTGGTTTGACTTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: PPTSCTFIMRNHKHTMSTWGPGT*WFDFLL
Trigger: GAGGAGAAAGTCAAACCACCACGTCCCCGGGCCCCA...AGTAGACATTGTATGCTTATGGTTTCTCATTATGAAGGTGCAGCTTGTAGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp TGCTGGAGAAGAACAAATGGAATTGCTCGTCTGCTAACTGTAACGTGCAGAACCAGCACTTGCGCTCAATaGCCAGGTGGTTGTCCTTCA +
Preference number: 4 (lower is better)
Translates to: CWRRTNGIARLLTVTCRTSTCAQ*PGGCPS
Trigger: TGAAGGACAACCACCTGGCCATTGAGCGCAAGTGCT...GGTTCTGCACGTTACAGTTAGCAGACGAGCAATTCCATTTGTTCTTCTCCAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp CCTTACCATGGCTACTTTGGCCTGAGAAGAAGAAATGATTCAGAACAAGGAAGATTCACGGGCTCAAACTaGGGCATATCCGGGGTGGAG +
Preference number: 4 (lower is better)
Translates to: PYHGYFGLRRRNDSEQGRFTGSN*GISGVE
Trigger: CTCCACCCCGGATATGCCCCAGTTTGAGCCCGTGAA...TCTTCCTTGTTCTGAATCATTTCTTCTTCTCAGGCCAAAGTAGCCATGGTAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp ACTCTCAAGAAGGGCAGGAAGAAGGTTCTGTGGCTTTTCCACCAGGATTGTAGAACAGTTTTGGTGACATaGGTGGTGGTGGAGGTTGAG +
Preference number: 4 (lower is better)
Translates to: TLKKGRKKVLWLFHQDCRTVLVT*VVVEVE
Trigger: CTCAACCTCCACCACCACCCATGTCACCAAAACTGT...TCTACAATCCTGGTGGAAAAGCCACAGAACCTTCTTCCTGCCCTTCTTGAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp CTGCCAGCCCCAGCAGCAGTGCAAGGATGCGGTGTTTCCTGTATATATATCTATAATGGTTCTCTGGCTTaGGTTGGACCAGAAATGCCA +
Preference number: 4 (lower is better)
Translates to: LPAPAAVQGCGVSCIYIYNGSLA*VGPEMP
Trigger: TGGCATTTCTGGTCCAACCCAAGCCAGAGAACCATT...ATAGATATATATACAGGAAACACCGCATCCTTGCACTGCTGCTGGGGCTGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp ACAAATGGAATTGCTCGTCTGCTAACTGTAACGTGCAGAACCAGGGCGGGAGGGTTCTTAATGGTTCTCTaGCTTGGGTTGGACCAGAAA +
Preference number: 4 (lower is better)
Translates to: TNGIARLLTVTCRTRAGGFLMVL*LGLDQK
Trigger: TTTCTGGTCCAACCCAAGCCAGAGAACCATTAAGAA...CCCTCCCGCCCTGGTTCTGCACGTTACAGTTAGCAGACGAGCAATTCCATTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp CCACCAGTTCTTCAATTTGTCTGCAAAGGAAATGTAGGTGTTCAGATGTCGGTTACAGTACGTCGCAGCTaGGACGTCAGTGTTGCGTCG +
Preference number: 4 (lower is better)
Translates to: PPVLQFVCKGNVGVQMSVTVRRS*DVSVAS
Trigger: CGACGCAACACTGACGTCCCAGCTGCGACGTACTGT...AACCGACATCTGAACACCTACATTTCCTTTGCAGACAAATTGAAGAACTGGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp TTCAGTGTGCTCAGGACTCCTGGTTCCTGCAAAGATGAGTTCCTAGACCGAAGTTCCTTTGCATTCAAGTaGGCCTTAGAGATGCTGGAG +
Preference number: 4 (lower is better)
Translates to: FSVLRTPGSCKDEFLDRSSFAFK*ALEMLE
Trigger: CTCCAGCATCTCTAAGGCCCACTTGAATGCAAAGGA...ACTTCGGTCTAGGAACTCATCTTTGCAGGAACCAGGAGTCCTGAGCACACTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp AGGAAATGTAGGTGTTCAGATGTCGGTTGTTGCTGTCAGCCAACTGCTCTGCCATCCTTTGCATTCAAGTaGGCCTTAGAGATGCTGGAG +
Preference number: 4 (lower is better)
Translates to: RKCRCSDVGCCCQPTALPSFAFK*ALEMLE
Trigger: CTCCAGCATCTCTAAGGCCCACTTGAATGCAAAGGA...TGGCAGAGCAGTTGGCTGACAGCAACAACCGACATCTGAACACCTACATTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp CCCAGCAGCAGTGCAAGGATGCGGTGTTTCCTGTATATATATCTATATCTCTATGGCCGCGTGTCCTGCTaGGATGGATGCTTCTCATTG +
Preference number: 4 (lower is better)
Translates to: PSSSARMRCFLYIYLYLYGRVSC*DGCFSL
Trigger: CAATGAGAAGCATCCATCCCAGCAGGACACGCGGCC...ATAGAGATATAGATATATATACAGGAAACACCGCATCCTTGCACTGCTGCTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000636016.2
CDS-3UTR CCA 90 bp TTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTGAAGGTGTCTTGAACTaGCATTTTGGGGACGACATC +
Preference number: 4 (lower is better)
Translates to: FYNHRGLACVSYLAGERGEGVLN*HFGDDI
Trigger: GATGTCGTCCCCAAAATGCCAGTTCAAGACACCTTC...ACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp AAATGTAGGTGTTCAGATGTCGGTTGTTGCTGTCAGCCAACTGCTCTGCCAGCCAGTTGGTTATTACAATaGGGTCAGGGAAGGGCAGAA +
Preference number: 4 (lower is better)
Translates to: KCRCSDVGCCCQPTALPASWLLQ*GQGRAE
Trigger: TTCTGCCCTTCCCTGACCCCATTGTAATAACCAACT...GGCTGGCAGAGCAGTTGGCTGACAGCAACAACCGACATCTGAACACCTACATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp GCAGCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTACTTTGGATATGGAGTTaGTTATTACAATGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: AAGTSVLRRRIQNEGPFLLWIWS*LLQWGQ
Trigger: CTGACCCCATTGTAATAACCAACTCCATATCCAAAG...TAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp TCATCAGTGACAGTACGTCGCAGCTGGGACGTCAGTGTTGCGTCGGAGAATCCAAGGAAAAGGCTTAGCTaGGAATTTTTAGACAGTCAG +
Preference number: 4 (lower is better)
Translates to: SSVTVRRSWDVSVASENPRKRLS*EFLDSQ
Trigger: CTGACTGTCTAAAAATTCCCAGCTAAGCCTTTTCCT...TGGATTCTCCGACGCAACACTGACGTCCCAGCTGCGACGTACTGTCACTGATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp TCCCACCTTCTTCAGCCTGAGAATAGTCCCTGGCACAAGCAGGTAATCAGTAAACAGAGAAGTAGCTTGTaGCAGACAAGCCTGAGGAAG +
Preference number: 4 (lower is better)
Translates to: SHLLQPENSPWHKQVISKQRSSL*QTSLRK
Trigger: CTTCCTCAGGCTTGTCTGCCACAAGCTACTTCTCTG...TTTACTGATTACCTGCTTGTGCCAGGGACTATTCTCAGGCTGAAGAAGGTGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp TTCAGTGTGCTCAGGACTCCTGGTTCCTGCAAAGATGAGTTCCTAGACCGAAGTCAGATGGGCCAGCCATaGTTGAAATATAAAGCTGGC +
Preference number: 4 (lower is better)
Translates to: FSVLRTPGSCKDEFLDRSQMGQP*LKYKAG
Trigger: GCCAGCTTTATATTTCAACCATGGCTGGCCCATCTG...ACTTCGGTCTAGGAACTCATCTTTGCAGGAACCAGGAGTCCTGAGCACACTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp CCAGCCCCAGCAGCAGTGCAAGGATGCGGTGTTTCCTGTATATATATCTATATCTCACTGTGGAATGTGTaGCTTTGGGGCTGGCAAAGT +
Preference number: 4 (lower is better)
Translates to: PAPAAVQGCGVSCIYIYISLWNV*LWGWQS
Trigger: ACTTTGCCAGCCCCAAAGCCACACATTCCACAGTGA...GATATAGATATATATACAGGAAACACCGCATCCTTGCACTGCTGCTGGGGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS-3UTR CCA 90 bp ATATATATGCTTTTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGCAGCTGCCAGAACGTCTACCTTaGAGAGTCTGCCGTTGGCAA +
Preference number: 4 (lower is better)
Translates to: IYMLFPSQSLISDSTSQLPERLP*RVCRWQ
Trigger: TTGCCAACGGCAGACTCTCCAAGGTAGACGTTCTGG...CAGCTGCGACGTACTGTCACTGATGAGAGACTGGGAAGGGAAAAGCATATATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS-3UTR CCA 90 bp GACTTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGTCTGTCTGGTTTGACTaGCTTCCTGACATTCAGAGG +
Preference number: 4 (lower is better)
Translates to: DFYNHRGLACVSYLAGERSVWFD*LPDIQR
Trigger: CCTCTGAATGTCAGGAAGCCAGTCAAACCAGACAGA...CCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGAAGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS-3UTR TCA 90 bp CTTTTCTTTTTCTCATTTCAAAGGAGAGTCATCTGCAGTGGCCCTCAGAAGGACCCTTCTCTAGGAGGTTaGGGTGTTCACAGACCAGGT +
Preference number: 4 (lower is better)
Translates to: LFFFSFQRRVICSGPQKDPSLGG*GVHRPG
Trigger: ACCTGGTCTGTGAACACCTCAACCTCCTAGAGAAGG...GTCCTTCTGAGGGCCACTGCAGATGACTCTCCTTTGAAATGAGAAAAAGAAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp GCATTCAAGTGGGCCTTAGAGATGCTGGAGAAGAACAAATGGAATTGCTCGTCTCCCCAGGCCGGATCTTaGTATAGAAGTTACTCCTCT +
Preference number: 4 (lower is better)
Translates to: AFKWALEMLEKNKWNCSSPQAGS*YRSYSS
Trigger: AGAGGAGTAACTTCTATATCAAGATCCGGCCTGGGG...AGACGAGCAATTCCATTTGTTCTTCTCCAGCATCTCTAAGGCCCACTTGAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp CCTCCTACAAGCTGCACCTTCATAATGAGAAACCATAAGCATACAATGTCTACTCCACAGTCTCTTGGCTaGCCGGTGGTTTGGGAGCTT +
Preference number: 4 (lower is better)
Translates to: PPTSCTFIMRNHKHTMSTPQSLG*PVVWEL
Trigger: AAGCTCCCAAACCACCGGTCAGCCAAGAGACTGTGG...AGTAGACATTGTATGCTTATGGTTTCTCATTATGAAGGTGCAGCTTGTAGGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp CATCTTCTACAATGGCTGAGAGCACCACCTCCCTTTGGATATGGAGTTGGTTATAGCCGGAAGAATGTATaGTGCTCGATGCAGACCTTC +
Preference number: 4 (lower is better)
Translates to: HLLQWLRAPPPFGYGVGYSRKNV*CSMQTF
Trigger: GAAGGTCTGCATCGAGCATCATACATTCTTCCGGCT...ATAACCAACTCCATATCCAAAGGGAGGTGGTGCTCTCAGCCATTGTAGAAGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp CTTTTCTTTTTCTCATTTCAAAGGAGAGTCATCTGCAGTGGCCCTCAGAAGGACCTTTCACAGTTTTGGTaGCATGGGTGGTGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: LFFFSFQRRVICSGPQKDLSQFW*HGWWWR
Trigger: CCTCCACCACCACCCATGTCACCAAAACTGTGAAAG...GTCCTTCTGAGGGCCACTGCAGATGACTCTCCTTTGAAATGAGAAAAAGAAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp TCTTCAATTTGTCTGCAAAGGAAATGTAGGTGTTCAGATGTCGGTTGTTGCTGTGCCAGGGCCTGGTCTTaGTCGACATCTTCATCCCCA +
Preference number: 4 (lower is better)
Translates to: SSICLQRKCRCSDVGCCCARAWS*STSSSP
Trigger: TGGGGATGAAGATGTCGATCAAGACCAGGCCCTGGC...ACAGCAACAACCGACATCTGAACACCTACATTTCCTTTGCAGACAAATTGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp ATCTATATATATATGCTTTTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGCCAGTCTCTCATCAGTaGCAGTACGTCGCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: IYIYMLFPSQSLISDSTSPVSHQ*QYVAAG
Trigger: CCCAGCTGCGACGTACTGTCACTGATGAGAGACTGG...CGACGTACTGTCACTGATGAGAGACTGGGAAGGGAAAAGCATATATATATAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp TCTTCAATTTGTCTGCAAAGGAAATGTAGGTGTTCAGATGTCGGTTGTTGCTGTAGGGAGTGGTTGCTATaGACTCCCTCCCCACTGAGG +
Preference number: 4 (lower is better)
Translates to: SSICLQRKCRCSDVGCCCREWLL*TPSPLR
Trigger: CCTCAGTGGGGAGGGAGTTCATAGCAACCACTCCCT...ACAGCAACAACCGACATCTGAACACCTACATTTCCTTTGCAGACAAATTGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp AGGTTGAAGACAGACAAGACAAACGTCTCTATTCTCTACAAAGAGAAGGATGGGGCTGGGCCAGTTCAGTaGGATCTAGGAACCTCAGGA +
Preference number: 4 (lower is better)
Translates to: RLKTDKTNVSILYKEKDGAGPVQ*DLGTSG
Trigger: TCCTGAGGTTCCTAGATCTCACTGAACTGGCCCAGC...CCCATCCTTCTCTTTGTAGAGAATAGAGACGTTTGTCTTGTCTGTCTTCAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp ATATATATGCTTTTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGCAGCTGATCTTCTACAATGGCTaGGAGCACCACCTCCCTTTG +
Preference number: 4 (lower is better)
Translates to: IYMLFPSQSLISDSTSQLIFYNG*EHHLPL
Trigger: CAAAGGGAGGTGGTGCTCTCAGCCATTGTAGAAGAT...CAGCTGCGACGTACTGTCACTGATGAGAGACTGGGAAGGGAAAAGCATATATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp ATCTATATATATATGCTTTTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGTCAGGGTCTGCCCCATaGAGCCTCCTTACCATGGCT +
Preference number: 4 (lower is better)
Translates to: IYIYMLFPSQSLISDSTSSGSAP*SLLTMA
Trigger: AGCCATGGTAAGGAGGCTTCATGGGGCAGACCCTGA...CGACGTACTGTCACTGATGAGAGACTGGGAAGGGAAAAGCATATATATATAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp GTTTTCCTTTGCATTCAAGTGGGCCTTAGAGATGCTGGAGAAGAACAAATGGAAAGTTCAGCTGTTGACTaGGAGGGAGGTCTCCAAGCC +
Preference number: 4 (lower is better)
Translates to: VFLCIQVGLRDAGEEQMESSAVD*EGGLQA
Trigger: GGCTTGGAGACCTCCCTCTCAGTCAACAGCTGAACT...TTCCATTTGTTCTTCTCCAGCATCTCTAAGGCCCACTTGAATGCAAAGGAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp ATATATATGCTTTTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGCAGCTGTGGGCCAGCCATGGTTaGAATATAAAGCTGGCTCAG +
Preference number: 4 (lower is better)
Translates to: IYMLFPSQSLISDSTSQLWASHG*NIKLAQ
Trigger: CTGAGCCAGCTTTATATTTCAACCATGGCTGGCCCA...CAGCTGCGACGTACTGTCACTGATGAGAGACTGGGAAGGGAAAAGCATATATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp ATATATATGCTTTTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGCAGCTGGGTGTATGTCATCACTaGCAAGCCAAAGGGACGCAT +
Preference number: 4 (lower is better)
Translates to: IYMLFPSQSLISDSTSQLGVCHH*QAKGTH
Trigger: ATGCGTCCCTTTGGCTTGTCAGTGATGACATACACC...CAGCTGCGACGTACTGTCACTGATGAGAGACTGGGAAGGGAAAAGCATATATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp GTTTTCCTTTGCATTCAAGTGGGCCTTAGAGATGCTGGAGAAGAACAAATGGAAATTCTGCTGCCCCGCTaGACTTCCCATTTGCCCAGA +
Preference number: 4 (lower is better)
Translates to: VFLCIQVGLRDAGEEQMEILLPR*TSHLPR
Trigger: TCTGGGCAAATGGGAAGTTCAGCGGGGCAGCAGAAT...TTCCATTTGTTCTTCTCCAGCATCTCTAAGGCCCACTTGAATGCAAAGGAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp TATATATATATGCTTTTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGCAGCAAGGATCCTCCCTCTaGGGTGTGTTCAGTGTGCTC +
Preference number: 4 (lower is better)
Translates to: YIYMLFPSQSLISDSTSQQGSSL*GVFSVL
Trigger: GAGCACACTGAACACACCTCAGAGGGAGGATCCTTG...CTGCGACGTACTGTCACTGATGAGAGACTGGGAAGGGAAAAGCATATATATATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp TCTTCAATTTGTCTGCAAAGGAAATGTAGGTGTTCAGATGTCGGTTGTTGCTGTACGCTCAAAGAAGGGTaGAGGCCGGTCAATGAGGGC +
Preference number: 4 (lower is better)
Translates to: SSICLQRKCRCSDVGCCCTLKEG*RPVNEG
Trigger: GCCCTCATTGACCGGCCTGCACCCTTCTTTGAGCGT...ACAGCAACAACCGACATCTGAACACCTACATTTCCTTTGCAGACAAATTGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp CTGCCAGCCCCAGCAGCAGTGCAAGGATGCGGTGTTTCCTGTATATATATCTATACATGGTGTACCGTTTaGTGGAAGAACGCTCAAAGA +
Preference number: 4 (lower is better)
Translates to: LPAPAAVQGCGVSCIYIYTWCTV*WKNAQR
Trigger: TCTTTGAGCGTTCTTCCAGCAAACGGTACACCATGT...ATAGATATATATACAGGAAACACCGCATCCTTGCACTGCTGCTGGGGCTGGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp ATCTATATATATATGCTTTTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGGTCACCGTCAGGCCCTaGATCATGGTTCTCGCTGAC +
Preference number: 4 (lower is better)
Translates to: IYIYMLFPSQSLISDSTSVTVRP*IMVLAD
Trigger: GTCAGCGAGAACCATGATGCAGGGCCTGACGGTGAC...CGACGTACTGTCACTGATGAGAGACTGGGAAGGGAAAAGCATATATATATAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp TCCCACCTTCTTCAGCCTGAGAATAGTCCCTGGCACAAGCAGGTAATCAGTAAAAGCATATCAGGATGCTaGAGTTTGGCCTCCTTGATG +
Preference number: 4 (lower is better)
Translates to: SHLLQPENSPWHKQVISKSISGC*SLASLM
Trigger: CATCAAGGAGGCCAAACTGCAGCATCCTGATATGCT...TTTACTGATTACCTGCTTGTGCCAGGGACTATTCTCAGGCTGAAGAAGGTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp CCTCCTACAAGCTGCACCTTCATAATGAGAAACCATAAGCATACAATGTCTACTCTGCTAACTGTAACGTaGAGAACCAGGGCGGGAGGG +
Preference number: 4 (lower is better)
Translates to: PPTSCTFIMRNHKHTMSTLLTVT*RTRAGG
Trigger: CCCTCCCGCCCTGGTTCTGCACGTTACAGTTAGCAG...AGTAGACATTGTATGCTTATGGTTTCTCATTATGAAGGTGCAGCTTGTAGGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp AGGTGTATGTCATCACTGACAAGCCAAAGGGACGCATCTAACCTGGGCCGCCTGAAGAACAAATGGAATTaGTCGTCTGCTAACTGTAAC +
Preference number: 4 (lower is better)
Translates to: RCMSSLTSQRDASNLGRLKNKWN*SSANCN
Trigger: GTTACAGTTAGCAGACGAGCAATTCCATTTGTTCTT...CAGGCGGCCCAGGTTAGATGCGTCCCTTTGGCTTGTCAGTGATGACATACACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp AAATGTAGGTGTTCAGATGTCGGTTGTTGCTGTCAGCCAACTGCTCTGCCAGCCGCAAGTGTTTTCCTTTaGATTCAAGTGGGCCTTAGA +
Preference number: 4 (lower is better)
Translates to: KCRCSDVGCCCQPTALPAASVFL*IQVGLR
Trigger: TCTAAGGCCCACTTGAATGCAAAGGAAAACACTTGC...GGCTGGCAGAGCAGTTGGCTGACAGCAACAACCGACATCTGAACACCTACATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp TGCTGGAGAAGAACAAATGGAATTGCTCGTCTGCTAACTGTAACGTGCAGAACCGAGGAAGGTAGGTTTTaGAGCCCAGTGTCAAGATCC +
Preference number: 4 (lower is better)
Translates to: CWRRTNGIARLLTVTCRTEEGRF*SPVSRS
Trigger: GGATCTTGACACTGGGCTGCAAAACCTACCTTCCTC...GGTTCTGCACGTTACAGTTAGCAGACGAGCAATTCCATTTGTTCTTCTCCAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp ATCTATATATATATGCTTTTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGCTCGGCGTGGTTTCCTaGTCCGGCTTTAGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: IYIYMLFPSQSLISDSTSLGVVS*SGFSSL
Trigger: CAAGGAGCTAAAGCCGGAGCAGGAAACCACGCCGAG...CGACGTACTGTCACTGATGAGAGACTGGGAAGGGAAAAGCATATATATATAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000636016.2
CDS-3UTR GCA 90 bp ACTCTCAAGAAGGGCAGGAAGAAGGTTCTGTGGCTTTTCCACCAGGATTGTAGAGCCCAGAGAAGCAAATaGTATTCTGATTTCCTGCCC +
Preference number: 4 (lower is better)
Translates to: TLKKGRKKVLWLFHQDCRAQRSK*YSDFLP
Trigger: GGGCAGGAAATCAGAATAGCATTTGCTTCTCTGGGC...TCTACAATCCTGGTGGAAAAGCCACAGAACCTTCTTCCTGCCCTTCTTGAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp ACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTAATGGTTCTCGCTGAACTTCCCATTTaGCCAGAGAAGCAAATGCTA +
Preference number: 4 (lower is better)
Translates to: TSVLRRRIQNEGPFLMVLAELPI*PEKQML
Trigger: TAGCATTTGCTTCTCTGGGCAAATGGGAAGTTCAGC...GAGAACCATTAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp GACTTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGCTGAACTTCCCATTTaGCCAGAGAAGCAAATGCTA +
Preference number: 4 (lower is better)
Translates to: DFYNHRGLACVSYLAGERAELPI*PEKQML
Trigger: TAGCATTTGCTTCTCTGGGCAAATGGGAAGTTCAGC...CCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGAAGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp TTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTGCTGAACTTCCCATTTaGCCAGAGAAGCAAATGCTA +
Preference number: 4 (lower is better)
Translates to: FYNHRGLACVSYLAGERGAELPI*PEKQML
Trigger: TAGCATTTGCTTCTCTGGGCAAATGGGAAGTTCAGC...ACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp CCACCAGTTCTTCAATTTGTCTGCAAAGGAAATGTAGGTGTTCAGATGTCGGTTTGGTCACTTCACCCCTaGCCCAAAGCCAGGTGCAAA +
Preference number: 4 (lower is better)
Translates to: PPVLQFVCKGNVGVQMSVWSLHP*PKARCK
Trigger: TTTGCACCTGGCTTTGGGGCAGGGGTGAAGTGACCA...AACCGACATCTGAACACCTACATTTCCTTTGCAGACAAATTGAAGAACTGGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp AGGTTGAAGACAGACAAGACAAACGTCTCTATTCTCTACAAAGAGAAGGATGGGTGGTCACTTCACCCCTaGCCCAAAGCCAGGTGCAAA +
Preference number: 4 (lower is better)
Translates to: RLKTDKTNVSILYKEKDGWSLHP*PKARCK
Trigger: TTTGCACCTGGCTTTGGGGCAGGGGTGAAGTGACCA...CCCATCCTTCTCTTTGTAGAGAATAGAGACGTTTGTCTTGTCTGTCTTCAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp TTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTTTGTTGCTGGGTGTTTaGTCTTCTGTTTCCCACCAT +
Preference number: 4 (lower is better)
Translates to: FYNHRGLACVSYLAGERGLLLGV*SSVSHH
Trigger: ATGGTGGGAAACAGAAGAGCAAACACCCAGCAACAA...ACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS-3UTR CCA 90 bp GCATTCAAGTGGGCCTTAGAGATGCTGGAGAAGAACAAATGGAATTGCTCGTCTTCCAGCCAGTTCTTCTaGCTGTCAGCATCACAGAAG +
Preference number: 4 (lower is better)
Translates to: AFKWALEMLEKNKWNCSSSSQFF*LSASQK
Trigger: CTTCTGTGATGCTGACAGCCAGAAGAACTGGCTGGA...AGACGAGCAATTCCATTTGTTCTTCTCCAGCATCTCTAAGGCCCACTTGAATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp CTGCCAGCCCCAGCAGCAGTGCAAGGATGCGGTGTTTCCTGTATATATATCTATGGTCTACTCCGTACATaGAAAGCTTCTTGGCATTCT +
Preference number: 4 (lower is better)
Translates to: LPAPAAVQGCGVSCIYIYGLLRT*KASWHS
Trigger: AGAATGCCAAGAAGCTTTCCATGTACGGAGTAGACC...ATAGATATATATACAGGAAACACCGCATCCTTGCACTGCTGCTGGGGCTGGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp TATATATATATGCTTTTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGCAGTGCCCTCAGAGTCCTTaGCATGGTGCAGGTCTACTC +
Preference number: 4 (lower is better)
Translates to: YIYMLFPSQSLISDSTSQCPQSP*HGAGLL
Trigger: GAGTAGACCTGCACCATGCCAAGGACTCTGAGGGCA...CTGCGACGTACTGTCACTGATGAGAGACTGGGAAGGGAAAAGCATATATATATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp TATATATATATGCTTTTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGCAGCACTGTACCGGAACTTaGAGCCCATCACCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: YIYMLFPSQSLISDSTSQHCTGT*SPSPGS
Trigger: GCTTCCTGGTGATGGGCTCCAAGTTCCGGTACAGTG...CTGCGACGTACTGTCACTGATGAGAGACTGGGAAGGGAAAAGCATATATATATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp TATATATATATGCTTTTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGCAGCAGTCTCGATCCCGGTaGATGAGTTTGCTGTTGGGC +
Preference number: 4 (lower is better)
Translates to: YIYMLFPSQSLISDSTSQQSRSR*MSLLLG
Trigger: GCCCAACAGCAAACTCATCCACCGGGATCGAGACTG...CTGCGACGTACTGTCACTGATGAGAGACTGGGAAGGGAAAAGCATATATATATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp CCTTACCATGGCTACTTTGGCCTGAGAAGAAGAAATGATTCAGAACAAGGAAGACGCTCAATGGCCAGGTaGTTGTCCTTCAGGAACACC +
Preference number: 4 (lower is better)
Translates to: PYHGYFGLRRRNDSEQGRRSMAR*LSFRNT
Trigger: GGTGTTCCTGAAGGACAACCACCTGGCCATTGAGCG...TCTTCCTTGTTCTGAATCATTTCTTCTTCTCAGGCCAAAGTAGCCATGGTAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp CTGCTCTGCCAGCCCCAGCAGCAGTGCAAGGATGCGGTGTTTCCTGTATATATATGTATACGACAGCTTTaGTTACCAGCATATCAGGAT +
Preference number: 4 (lower is better)
Translates to: LLCQPQQQCKDAVFPVYICIRQL*LPAYQD
Trigger: ATCCTGATATGCTGGTAACCAAAGCTGTCGTATACA...TATATATACAGGAAACACCGCATCCTTGCACTGCTGCTGGGGCTGGCAGAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp CTTTTCTTTTTCTCATTTCAAAGGAGAGTCATCTGCAGTGGCCCTCAGAAGGACAGGTCAGGATTCCTGTaGCTTCTTGTCCCTCTCCTC +
Preference number: 4 (lower is better)
Translates to: LFFFSFQRRVICSGPQKDRSGFL*LLVPLL
Trigger: GAGGAGAGGGACAAGAAGCCACAGGAATCCTGACCT...GTCCTTCTGAGGGCCACTGCAGATGACTCTCCTTTGAAATGAGAAAAAGAAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp AGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGACAATCATCGTGGTCTaGCTTGCGTTTCTTATTTGG +
Preference number: 4 (lower is better)
Translates to: RAGGTSTIIVVWLAFLIWTIIVV*LAFLIW
Trigger: CCAAATAAGAAACGCAAGCCAGACCACGATGATTGT...CCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp AAATGTAGGTGTTCAGATGTCGGTTGTTGCTGTCAGCCAACTGCTCTGCCAGCCCTTCTACAATCATCGTaGTCTGGCTTGCGTTTCTTA +
Preference number: 4 (lower is better)
Translates to: KCRCSDVGCCCQPTALPALLQSS*SGLRFL
Trigger: TAAGAAACGCAAGCCAGACCACGATGATTGTAGAAG...GGCTGGCAGAGCAGTTGGCTGACAGCAACAACCGACATCTGAACACCTACATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp TCGTCTGCTAACTGTAACGTGCAGAACCAGGGCGGGAGGGACTTCTACAATCATCTTCTACAATCATCGTaGTCTGGCTTGCGTTTCTTA +
Preference number: 4 (lower is better)
Translates to: SSANCNVQNQGGRDFYNHLLQSS*SGLRFL
Trigger: TAAGAAACGCAAGCCAGACCACGATGATTGTAGAAG...ATGATTGTAGAAGTCCCTCCCGCCCTGGTTCTGCACGTTACAGTTAGCAGACGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp GAAGGCCCCTTCTTAATGGTTCTCTGGCTTGGGTTGGACCAGAAATGCCAGGATCTTCTACAATCATCGTaGTCTGGCTTGCGTTTCTTA +
Preference number: 4 (lower is better)
Translates to: EGPFLMVLWLGLDQKCQDLLQSS*SGLRFL
Trigger: TAAGAAACGCAAGCCAGACCACGATGATTGTAGAAG...ATCCTGGCATTTCTGGTCCAACCCAAGCCAGAGAACCATTAAGAAGGGGCCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp AGGTTGAAGACAGACAAGACAAACGTCTCTATTCTCTACAAAGAGAAGGATGGGGCTTGTGTCTCGGCGTaGTTTCCTGCTCCGGCTTTA +
Preference number: 4 (lower is better)
Translates to: RLKTDKTNVSILYKEKDGACVSA*FPAPAL
Trigger: TAAAGCCGGAGCAGGAAACCACGCCGAGACACAAGC...CCCATCCTTCTCTTTGTAGAGAATAGAGACGTTTGTCTTGTCTGTCTTCAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000636016.2
CDS-3UTR CCA 90 bp CTTTTCTTTTTCTCATTTCAAAGGAGAGTCATCTGCAGTGGCCCTCAGAAGGACCTCCCATCAACCTGCTaGGTGTTATCCATAGCGGAG +
Preference number: 4 (lower is better)
Translates to: LFFFSFQRRVICSGPQKDLPSTC*VLSIAE
Trigger: CTCCGCTATGGATAACACCCAGCAGGTTGATGGGAG...GTCCTTCTGAGGGCCACTGCAGATGACTCTCCTTTGAAATGAGAAAAAGAAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338074.7
ENST00000373950.6
ENST00000628415.2
CDS-3UTR CCA 90 bp ATCTATATATATATGCTTTTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGAGCAGAGTCCCAGACTaGGACCCAGTACCTGAGCAC +
Preference number: 4 (lower is better)
Translates to: IYIYMLFPSQSLISDSTSSRVPD*DPVPEH
Trigger: GTGCTCAGGTACTGGGTCCCAGTCTGGGACTCTGCT...CGACGTACTGTCACTGATGAGAGACTGGGAAGGGAAAAGCATATATATATAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp GAGGCGGGAGAGAGGAAGGTAGGTTTTGCAGCCCAGTGTCAAGATCCAGAAAGTAGGAAAAGGCTTAGCTaGGAATTTTTAGACAGTCAG +
Preference number: 4 (lower is better)
Translates to: EAGERKVGFAAQCQDPESRKRLS*EFLDSQ
Trigger: CTGACTGTCTAAAAATTCCCAGCTAAGCCTTTTCCT...ACTTTCTGGATCTTGACACTGGGCTGCAAAACCTACCTTCCTCTCTCCCGCCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp TCTTCAATTTGTCTGCAAAGGAAATGTAGGTGTTCAGATGTCGGTTGTTGCTGTGTCTCAGCTTTGTCCTaGGACAGGGGAGGGCTTTGC +
Preference number: 4 (lower is better)
Translates to: SSICLQRKCRCSDVGCCCVSALS*DRGGLC
Trigger: GCAAAGCCCTCCCCTGTCCCAGGACAAAGCTGAGAC...ACAGCAACAACCGACATCTGAACACCTACATTTCCTTTGCAGACAAATTGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp ACTCTCAAGAAGGGCAGGAAGAAGGTTCTGTGGCTTTTCCACCAGGATTGTAGACTTGAAGGGTTCCTGTaGTCTTGGGGTAATTTCTGG +
Preference number: 4 (lower is better)
Translates to: TLKKGRKKVLWLFHQDCRLEGFL*SWGNFW
Trigger: CCAGAAATTACCCCAAGACCACAGGAACCCTTCAAG...TCTACAATCCTGGTGGAAAAGCCACAGAACCTTCTTCCTGCCCTTCTTGAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp GCCAGTTCAGTGAGATCTAGGAACCTCAGGATACATCAATCACAGTCAGATAATTATGCCCCGATAGGTTaGCGAGAGTGGGGAGATGCT +
Preference number: 4 (lower is better)
Translates to: ASSVRSRNLRIHQSQSDNYAPIG*REWGDA
Trigger: AGCATCTCCCCACTCTCGCCAACCTATCGGGGCATA...ATTATCTGACTGTGATTGATGTATCCTGAGGTTCCTAGATCTCACTGAACTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp GGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTGAGCAAGGGATTATAAGTAGAAAAAGACCCTaGAGAGCATCTGGTTCTTTC +
Preference number: 4 (lower is better)
Translates to: GLACVSYLAGERGEQGIISRKRP*RASGSF
Trigger: GAAAGAACCAGATGCTCTCCAGGGTCTTTTTCTACT...TATAATCCCTTGCTCACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp TTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTAATGGTTCTCTGGCTTGGGAGTAGAAAAAGACCCTaGAGAGCATCTGGTTCTTTC +
Preference number: 4 (lower is better)
Translates to: LRRRIQNEGPFLMVLWLGSRKRP*RASGSF
Trigger: GAAAGAACCAGATGCTCTCCAGGGTCTTTTTCTACT...CCCAAGCCAGAGAACCATTAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp CCTCCTACAAGCTGCACCTTCATAATGAGAAACCATAAGCATACAATGTCTACTCAGGGTCTGCCTTGCTaGAACCTGTTCCGTCAGCTC +
Preference number: 4 (lower is better)
Translates to: PPTSCTFIMRNHKHTMSTQGLPC*NLFRQL
Trigger: GAGCTGACGGAACAGGTTCCAGCAAGGCAGACCCTG...AGTAGACATTGTATGCTTATGGTTTCTCATTATGAAGGTGCAGCTTGTAGGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373950.6
CDS-3UTR CCA 90 bp ACCAGTTCTTCAATTTGTCTGCAAAGGAAATGTAGGTGTTCAGATGTCGGTTGTGTATGGGGTCCCTGCTaGACAGGTCTGGCTTCTGTG +
Preference number: 4 (lower is better)
Translates to: TSSSICLQRKCRCSDVGCVWGPC*TGLASV
Trigger: CACAGAAGCCAGACCTGTCCAGCAGGGACCCCATAC...ACAACCGACATCTGAACACCTACATTTCCTTTGCAGACAAATTGAAGAACTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373950.6
CDS-3UTR CCA 90 bp CCCAGCAGCAGTGCAAGGATGCGGTGTTTCCTGTATATATATCTATATCTCTATTGGAATGTGTGGCTTTaGGGCTGGCAAAGTCCCCTG +
Preference number: 4 (lower is better)
Translates to: PSSSARMRCFLYIYLYLYWNVWL*GWQSPL
Trigger: CAGGGGACTTTGCCAGCCCCAAAGCCACACATTCCA...ATAGAGATATAGATATATATACAGGAAACACCGCATCCTTGCACTGCTGCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS-3UTR CCA 90 bp CCTTACCATGGCTACTTTGGCCTGAGAAGAAGAAATGATTCAGAACAAGGAAGACCACTCCCCTCTCTTTaGGTGGGAAGTTGCCTCTGT +
Preference number: 4 (lower is better)
Translates to: PYHGYFGLRRRNDSEQGRPLPSL*VGSCLC
Trigger: ACAGAGGCAACTTCCCACCCAAAGAGAGGGGAGTGG...TCTTCCTTGTTCTGAATCATTTCTTCTTCTCAGGCCAAAGTAGCCATGGTAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS-3UTR TCA 90 bp GCCAGTTCAGTGAGATCTAGGAACCTCAGGATACATCAATCACAGTCAGATAATCCTTCTCTAGGAGGTTaGGGTGTTCACAGACCAGGT +
Preference number: 4 (lower is better)
Translates to: ASSVRSRNLRIHQSQSDNPSLGG*GVHRPG
Trigger: ACCTGGTCTGTGAACACCTCAACCTCCTAGAGAAGG...ATTATCTGACTGTGATTGATGTATCCTGAGGTTCCTAGATCTCACTGAACTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp TCTTCAATTTGTCTGCAAAGGAAATGTAGGTGTTCAGATGTCGGTTGTTGCTGTTCCGGATCTGCTTCTTaGTCTCCTTGGAGGGGTCCA +
Preference number: 4 (lower is better)
Translates to: SSICLQRKCRCSDVGCCCSGSAS*SPWRGP
Trigger: TGGACCCCTCCAAGGAGATCAAGAAGCAGATCCGGA...ACAGCAACAACCGACATCTGAACACCTACATTTCCTTTGCAGACAAATTGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp ATATATATGCTTTTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGCAGCTGACAGGTAGTATCTTGTaGTGTCTTCTGTCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: IYMLFPSQSLISDSTSQLTGSIL*CLLSAG
Trigger: CCCAGCTGACAGAAGACATCACAAGATACTACCTGT...CAGCTGCGACGTACTGTCACTGATGAGAGACTGGGAAGGGAAAAGCATATATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp CATCTTCTACAATGGCTGAGAGCACCACCTCCCTTTGGATATGGAGTTGGTTATACAGGTAGTATCTTGTaGTGTCTTCTGTCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: HLLQWLRAPPPFGYGVGYTGSIL*CLLSAG
Trigger: CCCAGCTGACAGAAGACATCACAAGATACTACCTGT...ATAACCAACTCCATATCCAAAGGGAGGTGGTGCTCTCAGCCATTGTAGAAGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp CTTTTCTTTTTCTCATTTCAAAGGAGAGTCATCTGCAGTGGCCCTCAGAAGGACCACAAACGCCTAACATaGTGTCGATGCCCTCAGAGT +
Preference number: 4 (lower is better)
Translates to: LFFFSFQRRVICSGPQKDHKRLT*CRCPQS
Trigger: ACTCTGAGGGCATCGACATCATGTTAGGCGTTTGTG...GTCCTTCTGAGGGCCACTGCAGATGACTCTCCTTTGAAATGAGAAAAAGAAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp CCCAGCAGCAGTGCAAGGATGCGGTGTTTCCTGTATATATATCTATATCTCTATCTTTCACAGTTTTGGTaGCATGGGTGGTGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: PSSSARMRCFLYIYLYLYLSQFW*HGWWWR
Trigger: CCTCCACCACCACCCATGTCACCAAAACTGTGAAAG...ATAGAGATATAGATATATATACAGGAAACACCGCATCCTTGCACTGCTGCTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp AGGTTGAAGACAGACAAGACAAACGTCTCTATTCTCTACAAAGAGAAGGATGGGCTTTCACAGTTTTGGTaGCATGGGTGGTGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: RLKTDKTNVSILYKEKDGLSQFW*HGWWWR
Trigger: CCTCCACCACCACCCATGTCACCAAAACTGTGAAAG...CCCATCCTTCTCTTTGTAGAGAATAGAGACGTTTGTCTTGTCTGTCTTCAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp TATATATATATGCTTTTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGCAGCTTTCACAGTTTTGGTaGCATGGGTGGTGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: YIYMLFPSQSLISDSTSQLSQFW*HGWWWR
Trigger: CCTCCACCACCACCCATGTCACCAAAACTGTGAAAG...CTGCGACGTACTGTCACTGATGAGAGACTGGGAAGGGAAAAGCATATATATATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp CTGCCAGCCCCAGCAGCAGTGCAAGGATGCGGTGTTTCCTGTATATATATCTATATGGCTACTTTGGCCTaGGAAGAAGAAATGATTCAG +
Preference number: 4 (lower is better)
Translates to: LPAPAAVQGCGVSCIYIYMATLA*EEEMIQ
Trigger: CTGAATCATTTCTTCTTCTCAGGCCAAAGTAGCCAT...ATAGATATATATACAGGAAACACCGCATCCTTGCACTGCTGCTGGGGCTGGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp ATCTATATATATATGCTTTTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGAGTTCAGCTGTTGACTaGGAGGGAGGTCTCCAAGCC +
Preference number: 4 (lower is better)
Translates to: IYIYMLFPSQSLISDSTSSSAVD*EGGLQA
Trigger: GGCTTGGAGACCTCCCTCTCAGTCAACAGCTGAACT...CGACGTACTGTCACTGATGAGAGACTGGGAAGGGAAAAGCATATATATATAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp CCACCAGTTCTTCAATTTGTCTGCAAAGGAAATGTAGGTGTTCAGATGTCGGTTGTGATGGGAGCTTCTTaGAGGGTTCCTGTGGTCTTG +
Preference number: 4 (lower is better)
Translates to: PPVLQFVCKGNVGVQMSVVMGAS*RVPVVL
Trigger: CAAGACCACAGGAACCCTTCAAGAAGCTCCCATCAC...AACCGACATCTGAACACCTACATTTCCTTTGCAGACAAATTGAAGAACTGGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp ACTCTCAAGAAGGGCAGGAAGAAGGTTCTGTGGCTTTTCCACCAGGATTGTAGAGCAGGATTCAAAAACTaGAACAGGTCCTGGTACTTC +
Preference number: 4 (lower is better)
Translates to: TLKKGRKKVLWLFHQDCRAGFKN*NRSWYF
Trigger: GAAGTACCAGGACCTGTTTCAGTTTTTGAATCCTGC...TCTACAATCCTGGTGGAAAAGCCACAGAACCTTCTTCCTGCCCTTCTTGAGAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp TTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTAATGGTTCTCTGGCTTGGGAATTTTGTTGGCCACTaGGGTCTTGCTAATATCTTC +
Preference number: 4 (lower is better)
Translates to: LRRRIQNEGPFLMVLWLGNFVGH*GLANIF
Trigger: GAAGATATTAGCAAGACCTCAGTGGCCAACAAAATT...CCCAAGCCAGAGAACCATTAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS-3UTR GCA 90 bp CCACCAGTTCTTCAATTTGTCTGCAAAGGAAATGTAGGTGTTCAGATGTCGGTTGGGCTACTCCGGATCTaGTTCTTGATCTCCTTGGAG +
Preference number: 4 (lower is better)
Translates to: PPVLQFVCKGNVGVQMSVGLLRI*FLISLE
Trigger: CTCCAAGGAGATCAAGAAGCAGATCCGGAGTAGCCC...AACCGACATCTGAACACCTACATTTCCTTTGCAGACAAATTGAAGAACTGGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp CCTCCTACAAGCTGCACCTTCATAATGAGAAACCATAAGCATACAATGTCTACTCTGCTCCATCAAGGCTaGGGGACATGGTGTACCGTT +
Preference number: 4 (lower is better)
Translates to: PPTSCTFIMRNHKHTMSTLLHQG*GTWCTV
Trigger: AACGGTACACCATGTCCCGCAGCCTTGATGGAGCAG...AGTAGACATTGTATGCTTATGGTTTCTCATTATGAAGGTGCAGCTTGTAGGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp ATATATATGCTTTTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGCAGCTGTTGATGCTGGCCTGGTaGTTCAGCAAGACATCTTCT +
Preference number: 4 (lower is better)
Translates to: IYMLFPSQSLISDSTSQLLMLAW*FSKTSS
Trigger: AGAAGATGTCTTGCTGAAGCACCAGGCCAGCATCAA...CAGCTGCGACGTACTGTCACTGATGAGAGACTGGGAAGGGAAAAGCATATATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp CCCAGCAGCAGTGCAAGGATGCGGTGTTTCCTGTATATATATCTATATCTCTATCTGGGACGTCAGTGTTaGGTCGGAGAATCCAGAATG +
Preference number: 4 (lower is better)
Translates to: PSSSARMRCFLYIYLYLYLGRQC*VGESRM
Trigger: CATTCTGGATTCTCCGACGCAACACTGACGTCCCAG...ATAGAGATATAGATATATATACAGGAAACACCGCATCCTTGCACTGCTGCTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp GTTTTCCTTTGCATTCAAGTGGGCCTTAGAGATGCTGGAGAAGAACAAATGGAACTGGGACGTCAGTGTTaGGTCGGAGAATCCAGAATG +
Preference number: 4 (lower is better)
Translates to: VFLCIQVGLRDAGEEQMELGRQC*VGESRM
Trigger: CATTCTGGATTCTCCGACGCAACACTGACGTCCCAG...TTCCATTTGTTCTTCTCCAGCATCTCTAAGGCCCACTTGAATGCAAAGGAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp TCCCACCTTCTTCAGCCTGAGAATAGTCCCTGGCACAAGCAGGTAATCAGTAAAGCAGCAGTGCAAGGATaGGGTGTTTCCTGTATATAT +
Preference number: 4 (lower is better)
Translates to: SHLLQPENSPWHKQVISKAAVQG*GVSCIY
Trigger: ATATATACAGGAAACACCGCATCCTTGCACTGCTGC...TTTACTGATTACCTGCTTGTGCCAGGGACTATTCTCAGGCTGAAGAAGGTGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp TTAATGGTTCTCTGGCTTGGGTTGGACCAGAAATGCCAGGATCTCTTCACAGAGGCAGCAGTGCAAGGATaGGGTGTTTCCTGTATATAT +
Preference number: 4 (lower is better)
Translates to: LMVLWLGLDQKCQDLFTEAAVQG*GVSCIY
Trigger: ATATATACAGGAAACACCGCATCCTTGCACTGCTGC...CTCTGTGAAGAGATCCTGGCATTTCTGGTCCAACCCAAGCCAGAGAACCATTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp GCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTAATGAAGAACAAATGGAATTaGTCGTCTGCTAACTGTAAC +
Preference number: 4 (lower is better)
Translates to: AGTSVLRRRIQNEGPFLMKNKWN*SSANCN
Trigger: GTTACAGTTAGCAGACGAGCAATTCCATTTGTTCTT...CATTAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp ACAAATGGAATTGCTCGTCTGCTAACTGTAACGTGCAGAACCAGGGCGGGAGGGAAGAACAAATGGAATTaGTCGTCTGCTAACTGTAAC +
Preference number: 4 (lower is better)
Translates to: TNGIARLLTVTCRTRAGGKNKWN*SSANCN
Trigger: GTTACAGTTAGCAGACGAGCAATTCCATTTGTTCTT...CCCTCCCGCCCTGGTTCTGCACGTTACAGTTAGCAGACGAGCAATTCCATTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp CTGCCAGCCCCAGCAGCAGTGCAAGGATGCGGTGTTTCCTGTATATATATCTATGCAAGTGTTTTCCTTTaGATTCAAGTGGGCCTTAGA +
Preference number: 4 (lower is better)
Translates to: LPAPAAVQGCGVSCIYIYASVFL*IQVGLR
Trigger: TCTAAGGCCCACTTGAATGCAAAGGAAAACACTTGC...ATAGATATATATACAGGAAACACCGCATCCTTGCACTGCTGCTGGGGCTGGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp GACTTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGCAAGTGTTTTCCTTTaGATTCAAGTGGGCCTTAGA +
Preference number: 4 (lower is better)
Translates to: DFYNHRGLACVSYLAGERASVFL*IQVGLR
Trigger: TCTAAGGCCCACTTGAATGCAAAGGAAAACACTTGC...CCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGAAGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp CCCAGCAGCAGTGCAAGGATGCGGTGTTTCCTGTATATATATCTATATCTCTATCAAAGGAGAGTCATCTaGAGTGGCCCTCAGAAGGAC +
Preference number: 4 (lower is better)
Translates to: PSSSARMRCFLYIYLYLYQRRVI*SGPQKD
Trigger: GTCCTTCTGAGGGCCACTGCAGATGACTCTCCTTTG...ATAGAGATATAGATATATATACAGGAAACACCGCATCCTTGCACTGCTGCTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp AAATGTAGGTGTTCAGATGTCGGTTGTTGCTGTCAGCCAACTGCTCTGCCAGCCAAACCTCCTACAAGCTaGACCTTCATAATGAGAAAC +
Preference number: 4 (lower is better)
Translates to: KCRCSDVGCCCQPTALPAKPPTS*TFIMRN
Trigger: GTTTCTCATTATGAAGGTGCAGCTTGTAGGAGGTTT...GGCTGGCAGAGCAGTTGGCTGACAGCAACAACCGACATCTGAACACCTACATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp GCCAGTTCAGTGAGATCTAGGAACCTCAGGATACATCAATCACAGTCAGATAATTCCTGCTGGGATGGATaGTTCTCATTGGAGTTGGCC +
Preference number: 4 (lower is better)
Translates to: ASSVRSRNLRIHQSQSDNSCWDG*FSLELA
Trigger: GGCCAACTCCAATGAGAAGCATCCATCCCAGCAGGA...ATTATCTGACTGTGATTGATGTATCCTGAGGTTCCTAGATCTCACTGAACTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000636016.2
CDS-3UTR GCA 90 bp CCCAGCAGCAGTGCAAGGATGCGGTGTTTCCTGTATATATATCTATATCTCTATTCCTGCTGGGATGGATaGTTCTCATTGGAGTTGGCC +
Preference number: 4 (lower is better)
Translates to: PSSSARMRCFLYIYLYLYSCWDG*FSLELA
Trigger: GGCCAACTCCAATGAGAAGCATCCATCCCAGCAGGA...ATAGAGATATAGATATATATACAGGAAACACCGCATCCTTGCACTGCTGCTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000636016.2
CDS-3UTR GCA 90 bp ATATATATGCTTTTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGCAGCTGGTGTTGCTTCTTTCTTaGCAAACCCACACCTCTCCA +
Preference number: 4 (lower is better)
Translates to: IYMLFPSQSLISDSTSQLVLLLS*QTHTSP
Trigger: TGGAGAGGTGTGGGTTTGGCAAGAAAGAAGCAACAC...CAGCTGCGACGTACTGTCACTGATGAGAGACTGGGAAGGGAAAAGCATATATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp CCAGCCCCAGCAGCAGTGCAAGGATGCGGTGTTTCCTGTATATATATCTATATCGGAGGGCTTTGCAAATaGAGTTTTGATCTTTCAGGG +
Preference number: 4 (lower is better)
Translates to: PAPAAVQGCGVSCIYIYIGGLCK*SFDLSG
Trigger: CCCTGAAAGATCAAAACTGCATTTGCAAAGCCCTCC...GATATAGATATATATACAGGAAACACCGCATCCTTGCACTGCTGCTGGGGCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp GAAGGTGTCTTGAACTGGCATTTTGGGGACGACATCTGTGTTGCTTCTTTCTTGGCCCAGAGAAGCAAATaGTATTCTGATTTCCTGCCC +
Preference number: 4 (lower is better)
Translates to: EGVLNWHFGDDICVASFLAQRSK*YSDFLP
Trigger: GGGCAGGAAATCAGAATAGCATTTGCTTCTCTGGGC...CAAGAAAGAAGCAACACAGATGTCGTCCCCAAAATGCCAGTTCAAGACACCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp GAAGGTGTCTTGAACTGGCATTTTGGGGACGACATCTGTGTTGCTTCTTTCTTGTGCCCCAAAGCCAGGTaGAAAATCCACAACAAGGAT +
Preference number: 4 (lower is better)
Translates to: EGVLNWHFGDDICVASFLCPKAR*KIHNKD
Trigger: ATCCTTGTTGTGGATTTTGCACCTGGCTTTGGGGCA...CAAGAAAGAAGCAACACAGATGTCGTCCCCAAAATGCCAGTTCAAGACACCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp TTTCTTTTTCTCATTTCAAAGGAGAGTCATCTGCAGTGGCCCTCAGAAGGACCAGGACTTTTTCCACTATaGTACATGGCCTCCTGGGTG +
Preference number: 4 (lower is better)
Translates to: FLFLISKESHLQWPSEGPGLFPL*YMASWV
Trigger: CACCCAGGAGGCCATGTAGCATAGTGGAAAAAGTCC...TGGTCCTTCTGAGGGCCACTGCAGATGACTCTCCTTTGAAATGAGAAAAAGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp AATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTGAGCAAATAGAAGCTCCTCTCTaGAAAGGAAGTATCAGTTTC +
Preference number: 4 (lower is better)
Translates to: NHRGLACVSYLAGERGEQIEAPL*KGSISF
Trigger: GAAACTGATACTTCCTTTGCAGAGAGGAGCTTCTAT...TTGCTCACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS-3UTR CCA 90 bp ACTCTCAAGAAGGGCAGGAAGAAGGTTCTGTGGCTTTTCCACCAGGATTGTAGAGGTCTACTCCGTACATaGAAAGCTTCTTGGCATTCT +
Preference number: 4 (lower is better)
Translates to: TLKKGRKKVLWLFHQDCRGLLRT*KASWHS
Trigger: AGAATGCCAAGAAGCTTTCCATGTACGGAGTAGACC...TCTACAATCCTGGTGGAAAAGCCACAGAACCTTCTTCCTGCCCTTCTTGAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp TCTTCAATTTGTCTGCAAAGGAAATGTAGGTGTTCAGATGTCGGTTGTTGCTGTTGCCCTCAGAGTCCTTaGCATGGTGCAGGTCTACTC +
Preference number: 4 (lower is better)
Translates to: SSICLQRKCRCSDVGCCCCPQSP*HGAGLL
Trigger: GAGTAGACCTGCACCATGCCAAGGACTCTGAGGGCA...ACAGCAACAACCGACATCTGAACACCTACATTTCCTTTGCAGACAAATTGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp CCTTACCATGGCTACTTTGGCCTGAGAAGAAGAAATGATTCAGAACAAGGAAGACTCTTGGCTGACCGGTaGTTTGGGAGCTTAAAGCCA +
Preference number: 4 (lower is better)
Translates to: PYHGYFGLRRRNDSEQGRLLADR*FGSLKP
Trigger: TGGCTTTAAGCTCCCAAACCACCGGTCAGCCAAGAG...TCTTCCTTGTTCTGAATCATTTCTTCTTCTCAGGCCAAAGTAGCCATGGTAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp CCTCCTACAAGCTGCACCTTCATAATGAGAAACCATAAGCATACAATGTCTACTCACTGTACCGGAACTTaGAGCCCATCACCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: PPTSCTFIMRNHKHTMSTHCTGT*SPSPGS
Trigger: GCTTCCTGGTGATGGGCTCCAAGTTCCGGTACAGTG...AGTAGACATTGTATGCTTATGGTTTCTCATTATGAAGGTGCAGCTTGTAGGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp ATCTATATATATATGCTTTTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGCACTGTACCGGAACTTaGAGCCCATCACCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: IYIYMLFPSQSLISDSTSHCTGT*SPSPGS
Trigger: GCTTCCTGGTGATGGGCTCCAAGTTCCGGTACAGTG...CGACGTACTGTCACTGATGAGAGACTGGGAAGGGAAAAGCATATATATATAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp GCATTCAAGTGGGCCTTAGAGATGCTGGAGAAGAACAAATGGAATTGCTCGTCTTCATTGATGCTGGCCTaGTGCTTCAGCAAGACATCT +
Preference number: 4 (lower is better)
Translates to: AFKWALEMLEKNKWNCSSSLMLA*CFSKTS
Trigger: AGATGTCTTGCTGAAGCACCAGGCCAGCATCAATGA...AGACGAGCAATTCCATTTGTTCTTCTCCAGCATCTCTAAGGCCCACTTGAATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp TTTCTTTTTCTCATTTCAAAGGAGAGTCATCTGCAGTGGCCCTCAGAAGGACCAACAGTTTTGGTGACATaGGTGGTGGTGGAGGTTGAG +
Preference number: 4 (lower is better)
Translates to: FLFLISKESHLQWPSEGPTVLVT*VVVEVE
Trigger: CTCAACCTCCACCACCACCCATGTCACCAAAACTGT...TGGTCCTTCTGAGGGCCACTGCAGATGACTCTCCTTTGAAATGAGAAAAAGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp GGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTGAGCAAGGGATTATATGTATACGACAGCTTTaGTTACCAGCATATCAGGAT +
Preference number: 4 (lower is better)
Translates to: GLACVSYLAGERGEQGIICIRQL*LPAYQD
Trigger: ATCCTGATATGCTGGTAACCAAAGCTGTCGTATACA...TATAATCCCTTGCTCACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp CCACCAGTTCTTCAATTTGTCTGCAAAGGAAATGTAGGTGTTCAGATGTCGGTTCTTGTCCCTCTCCTCTaGGGATGGGTCTGTTTCTCT +
Preference number: 4 (lower is better)
Translates to: PPVLQFVCKGNVGVQMSVLVPLL*GWVCFS
Trigger: AGAGAAACAGACCCATCCCCAGAGGAGAGGGACAAG...AACCGACATCTGAACACCTACATTTCCTTTGCAGACAAATTGAAGAACTGGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp GTTTTCCTTTGCATTCAAGTGGGCCTTAGAGATGCTGGAGAAGAACAAATGGAACTTGTCCCTCTCCTCTaGGGATGGGTCTGTTTCTCT +
Preference number: 4 (lower is better)
Translates to: VFLCIQVGLRDAGEEQMELVPLL*GWVCFS
Trigger: AGAGAAACAGACCCATCCCCAGAGGAGAGGGACAAG...TTCCATTTGTTCTTCTCCAGCATCTCTAAGGCCCACTTGAATGCAAAGGAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp TATATATATATGCTTTTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGCAGAGGTCAGGATTCCTGTaGCTTCTTGTCCCTCTCCTC +
Preference number: 4 (lower is better)
Translates to: YIYMLFPSQSLISDSTSQRSGFL*LLVPLL
Trigger: GAGGAGAGGGACAAGAAGCCACAGGAATCCTGACCT...CTGCGACGTACTGTCACTGATGAGAGACTGGGAAGGGAAAAGCATATATATATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp CCACCAGTTCTTCAATTTGTCTGCAAAGGAAATGTAGGTGTTCAGATGTCGGTTAGGTCAGGATTCCTGTaGCTTCTTGTCCCTCTCCTC +
Preference number: 4 (lower is better)
Translates to: PPVLQFVCKGNVGVQMSVRSGFL*LLVPLL
Trigger: GAGGAGAGGGACAAGAAGCCACAGGAATCCTGACCT...AACCGACATCTGAACACCTACATTTCCTTTGCAGACAAATTGAAGAACTGGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp TTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTTTCTTAATGGTTCTCTaGCTTGGGTTGGACCAGAAA +
Preference number: 4 (lower is better)
Translates to: FYNHRGLACVSYLAGERGFLMVL*LGLDQK
Trigger: TTTCTGGTCCAACCCAAGCCAGAGAACCATTAAGAA...ACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp CCACCAGTTCTTCAATTTGTCTGCAAAGGAAATGTAGGTGTTCAGATGTCGGTTCTCCCATCAACCTGCTaGGTGTTATCCATAGCGGAG +
Preference number: 4 (lower is better)
Translates to: PPVLQFVCKGNVGVQMSVLPSTC*VLSIAE
Trigger: CTCCGCTATGGATAACACCCAGCAGGTTGATGGGAG...AACCGACATCTGAACACCTACATTTCCTTTGCAGACAAATTGAAGAACTGGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338074.7
ENST00000373950.6
ENST00000628415.2
CDS-3UTR CCA 90 bp CCACCAGTTCTTCAATTTGTCTGCAAAGGAAATGTAGGTGTTCAGATGTCGGTTGACTGTTCTCCATGGTaGTCGATATGGTCTCCGTGG +
Preference number: 4 (lower is better)
Translates to: PPVLQFVCKGNVGVQMSVDCSPW*SIWSPW
Trigger: CCACGGAGACCATATCGACCACCATGGAGAACAGTC...AACCGACATCTGAACACCTACATTTCCTTTGCAGACAAATTGAAGAACTGGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp GAAGGTGTCTTGAACTGGCATTTTGGGGACGACATCTGTGTTGCTTCTTTCTTGCTTGAACTGGCATTTTaGGGACGACATCTGTGTTGC +
Preference number: 4 (lower is better)
Translates to: EGVLNWHFGDDICVASFLLELAF*GRHLCC
Trigger: GCAACACAGATGTCGTCCCCAAAATGCCAGTTCAAG...CAAGAAAGAAGCAACACAGATGTCGTCCCCAAAATGCCAGTTCAAGACACCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp TTAATGGTTCTCTGGCTTGGGTTGGACCAGAAATGCCAGGATCTCTTCACAGAGAGTTGGTTATTACAATaGGGTCAGGGAAGGGCAGAA +
Preference number: 4 (lower is better)
Translates to: LMVLWLGLDQKCQDLFTESWLLQ*GQGRAE
Trigger: TTCTGCCCTTCCCTGACCCCATTGTAATAACCAACT...CTCTGTGAAGAGATCCTGGCATTTCTGGTCCAACCCAAGCCAGAGAACCATTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp GGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTGAGCAAGGGATTATACTTTGGATATGGAGTTaGTTATTACAATGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: GLACVSYLAGERGEQGIILWIWS*LLQWGQ
Trigger: CTGACCCCATTGTAATAACCAACTCCATATCCAAAG...TATAATCCCTTGCTCACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp CTGCCAGCCCCAGCAGCAGTGCAAGGATGCGGTGTTTCCTGTATATATATCTATAAATTCGCAGTGCAGTaGGACATTTTCCCTCATCAA +
Preference number: 4 (lower is better)
Translates to: LPAPAAVQGCGVSCIYIYKFAVQ*DIFPHQ
Trigger: TTGATGAGGGAAAATGTCCCACTGCACTGCGAATTT...ATAGATATATATACAGGAAACACCGCATCCTTGCACTGCTGCTGGGGCTGGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp ATATATATGCTTTTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGCAGCTGCAGATGGGCCAGCCATaGTTGAAATATAAAGCTGGC +
Preference number: 4 (lower is better)
Translates to: IYMLFPSQSLISDSTSQLQMGQP*LKYKAG
Trigger: GCCAGCTTTATATTTCAACCATGGCTGGCCCATCTG...CAGCTGCGACGTACTGTCACTGATGAGAGACTGGGAAGGGAAAAGCATATATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp GAAGGCCCCTTCTTAATGGTTCTCTGGCTTGGGTTGGACCAGAAATGCCAGGATATTGTAGAAAGAACCTaGTGTATGGAAAGTGTGCTG +
Preference number: 4 (lower is better)
Translates to: EGPFLMVLWLGLDQKCQDIVERT*CMESVL
Trigger: CAGCACACTTTCCATACACCAGGTTCTTTCTACAAT...ATCCTGGCATTTCTGGTCCAACCCAAGCCAGAGAACCATTAAGAAGGGGCCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp CATCTTCTACAATGGCTGAGAGCACCACCTCCCTTTGGATATGGAGTTGGTTATCTACAAAGAGAAGGATaGGGAGGAAACAGTGCCCTA +
Preference number: 4 (lower is better)
Translates to: HLLQWLRAPPPFGYGVGYLQREG*GGNSAL
Trigger: TAGGGCACTGTTTCCTCCCCATCCTTCTCTTTGTAG...ATAACCAACTCCATATCCAAAGGGAGGTGGTGCTCTCAGCCATTGTAGAAGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp CTTTTCTTTTTCTCATTTCAAAGGAGAGTCATCTGCAGTGGCCCTCAGAAGGACACAGGTAGTATCTTGTaGTGTCTTCTGTCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: LFFFSFQRRVICSGPQKDTGSIL*CLLSAG
Trigger: CCCAGCTGACAGAAGACATCACAAGATACTACCTGT...GTCCTTCTGAGGGCCACTGCAGATGACTCTCCTTTGAAATGAGAAAAAGAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp GCCAGTTCAGTGAGATCTAGGAACCTCAGGATACATCAATCACAGTCAGATAATCACAAACGCCTAACATaGTGTCGATGCCCTCAGAGT +
Preference number: 4 (lower is better)
Translates to: ASSVRSRNLRIHQSQSDNHKRLT*CRCPQS
Trigger: ACTCTGAGGGCATCGACATCATGTTAGGCGTTTGTG...ATTATCTGACTGTGATTGATGTATCCTGAGGTTCCTAGATCTCACTGAACTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp GTTTTCCTTTGCATTCAAGTGGGCCTTAGAGATGCTGGAGAAGAACAAATGGAACCCCAGGCCGGATCTTaGTATAGAAGTTACTCCTCT +
Preference number: 4 (lower is better)
Translates to: VFLCIQVGLRDAGEEQMEPQAGS*YRSYSS
Trigger: AGAGGAGTAACTTCTATATCAAGATCCGGCCTGGGG...TTCCATTTGTTCTTCTCCAGCATCTCTAAGGCCCACTTGAATGCAAAGGAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp CCACCAGTTCTTCAATTTGTCTGCAAAGGAAATGTAGGTGTTCAGATGTCGGTTTTCTCGGAAAATGGTTaGCTGTGCGTGTCTTGCTGC +
Preference number: 4 (lower is better)
Translates to: PPVLQFVCKGNVGVQMSVFSENG*LCVSCC
Trigger: GCAGCAAGACACGCACAGTCAACCATTTTCCGAGAA...AACCGACATCTGAACACCTACATTTCCTTTGCAGACAAATTGAAGAACTGGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp CCACCAGTTCTTCAATTTGTCTGCAAAGGAAATGTAGGTGTTCAGATGTCGGTTATGACAGCAAGACATTaGGAGTTGAGGGTGAGGGGA +
Preference number: 4 (lower is better)
Translates to: PPVLQFVCKGNVGVQMSVMTARH*ELRVRG
Trigger: TCCCCTCACCCTCAACTCTCAATGTCTTGCTGTCAT...AACCGACATCTGAACACCTACATTTCCTTTGCAGACAAATTGAAGAACTGGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp TCTTCAATTTGTCTGCAAAGGAAATGTAGGTGTTCAGATGTCGGTTGTTGCTGTAGGGAGAAGGTGTCTTaGACTGGCATTTTGGGGACG +
Preference number: 4 (lower is better)
Translates to: SSICLQRKCRCSDVGCCCREKVS*TGILGT
Trigger: CGTCCCCAAAATGCCAGTTCAAGACACCTTCTCCCT...ACAGCAACAACCGACATCTGAACACCTACATTTCCTTTGCAGACAAATTGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp TATATATATATGCTTTTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGCAGATCTTCTACAATGGCTaGGAGCACCACCTCCCTTTG +
Preference number: 4 (lower is better)
Translates to: YIYMLFPSQSLISDSTSQIFYNG*EHHLPL
Trigger: CAAAGGGAGGTGGTGCTCTCAGCCATTGTAGAAGAT...CTGCGACGTACTGTCACTGATGAGAGACTGGGAAGGGAAAAGCATATATATATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp GCCAGTTCAGTGAGATCTAGGAACCTCAGGATACATCAATCACAGTCAGATAATTGGGCCAGCCATGGTTaGAATATAAAGCTGGCTCAG +
Preference number: 4 (lower is better)
Translates to: ASSVRSRNLRIHQSQSDNWASHG*NIKLAQ
Trigger: CTGAGCCAGCTTTATATTTCAACCATGGCTGGCCCA...ATTATCTGACTGTGATTGATGTATCCTGAGGTTCCTAGATCTCACTGAACTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp CCACCAGTTCTTCAATTTGTCTGCAAAGGAAATGTAGGTGTTCAGATGTCGGTTTGGTTCCTGCAAAGATaGGTTCCTAGACCGAAGTGG +
Preference number: 4 (lower is better)
Translates to: PPVLQFVCKGNVGVQMSVWFLQR*VPRPKW
Trigger: CCACTTCGGTCTAGGAACTCATCTTTGCAGGAACCA...AACCGACATCTGAACACCTACATTTCCTTTGCAGACAAATTGAAGAACTGGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp ATATATATGCTTTTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGCAGCTGACATGGTGTACCGTTTaGTGGAAGAACGCTCAAAGA +
Preference number: 4 (lower is better)
Translates to: IYMLFPSQSLISDSTSQLTWCTV*WKNAQR
Trigger: TCTTTGAGCGTTCTTCCAGCAAACGGTACACCATGT...CAGCTGCGACGTACTGTCACTGATGAGAGACTGGGAAGGGAAAAGCATATATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp CTTTTCTTTTTCTCATTTCAAAGGAGAGTCATCTGCAGTGGCCCTCAGAAGGACTTGATGCTGGCCTGGTaGTTCAGCAAGACATCTTCT +
Preference number: 4 (lower is better)
Translates to: LFFFSFQRRVICSGPQKDLMLAW*FSKTSS
Trigger: AGAAGATGTCTTGCTGAAGCACCAGGCCAGCATCAA...GTCCTTCTGAGGGCCACTGCAGATGACTCTCCTTTGAAATGAGAAAAAGAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp CCCAGCAGCAGTGCAAGGATGCGGTGTTTCCTGTATATATATCTATATCTCTATACCAGCATATCAGGATaGTGCAGTTTGGCCTCCTTG +
Preference number: 4 (lower is better)
Translates to: PSSSARMRCFLYIYLYLYTSISG*CSLASL
Trigger: CAAGGAGGCCAAACTGCAGCATCCTGATATGCTGGT...ATAGAGATATAGATATATATACAGGAAACACCGCATCCTTGCACTGCTGCTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp CCACCAGTTCTTCAATTTGTCTGCAAAGGAAATGTAGGTGTTCAGATGTCGGTTACCAGCATATCAGGATaGTGCAGTTTGGCCTCCTTG +
Preference number: 4 (lower is better)
Translates to: PPVLQFVCKGNVGVQMSVTSISG*CSLASL
Trigger: CAAGGAGGCCAAACTGCAGCATCCTGATATGCTGGT...AACCGACATCTGAACACCTACATTTCCTTTGCAGACAAATTGAAGAACTGGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp GAAGGTGTCTTGAACTGGCATTTTGGGGACGACATCTGTGTTGCTTCTTTCTTGGCAGCAGTGCAAGGATaGGGTGTTTCCTGTATATAT +
Preference number: 4 (lower is better)
Translates to: EGVLNWHFGDDICVASFLAAVQG*GVSCIY
Trigger: ATATATACAGGAAACACCGCATCCTTGCACTGCTGC...CAAGAAAGAAGCAACACAGATGTCGTCCCCAAAATGCCAGTTCAAGACACCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp TATATATATATGCTTTTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGCAGTCAGATGTCGGTTGTTaGTGTCAGCCAACTGCTCTG +
Preference number: 4 (lower is better)
Translates to: YIYMLFPSQSLISDSTSQSDVGC*CQPTAL
Trigger: CAGAGCAGTTGGCTGACAGCAACAACCGACATCTGA...CTGCGACGTACTGTCACTGATGAGAGACTGGGAAGGGAAAAGCATATATATATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp GGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTGAGCAAGGGATTATAAAGAACAAATGGAATTaGTCGTCTGCTAACTGTAAC +
Preference number: 4 (lower is better)
Translates to: GLACVSYLAGERGEQGIIKNKWN*SSANCN
Trigger: GTTACAGTTAGCAGACGAGCAATTCCATTTGTTCTT...TATAATCCCTTGCTCACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp AATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTGAGCAAAAGAACAAATGGAATTaGTCGTCTGCTAACTGTAAC +
Preference number: 4 (lower is better)
Translates to: NHRGLACVSYLAGERGEQKNKWN*SSANCN
Trigger: GTTACAGTTAGCAGACGAGCAATTCCATTTGTTCTT...TTGCTCACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp CCACCAGTTCTTCAATTTGTCTGCAAAGGAAATGTAGGTGTTCAGATGTCGGTTGAGGAAGGTAGGTTTTaGAGCCCAGTGTCAAGATCC +
Preference number: 4 (lower is better)
Translates to: PPVLQFVCKGNVGVQMSVEEGRF*SPVSRS
Trigger: GGATCTTGACACTGGGCTGCAAAACCTACCTTCCTC...AACCGACATCTGAACACCTACATTTCCTTTGCAGACAAATTGAAGAACTGGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp TTTCTTTTTCTCATTTCAAAGGAGAGTCATCTGCAGTGGCCCTCAGAAGGACCATTGTCTAAGAACTCCTaGTTGTGTCTCGGCGTGGTT +
Preference number: 4 (lower is better)
Translates to: FLFLISKESHLQWPSEGPLSKNS*LCLGVV
Trigger: AACCACGCCGAGACACAAGCAGGAGTTCTTAGACAA...TGGTCCTTCTGAGGGCCACTGCAGATGACTCTCCTTTGAAATGAGAAAAAGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000636016.2
CDS-3UTR GCA 90 bp GAAGGTGTCTTGAACTGGCATTTTGGGGACGACATCTGTGTTGCTTCTTTCTTGGGAGGGCTTTGCAAATaGAGTTTTGATCTTTCAGGG +
Preference number: 4 (lower is better)
Translates to: EGVLNWHFGDDICVASFLGGLCK*SFDLSG
Trigger: CCCTGAAAGATCAAAACTGCATTTGCAAAGCCCTCC...CAAGAAAGAAGCAACACAGATGTCGTCCCCAAAATGCCAGTTCAAGACACCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp GCATTCAAGTGGGCCTTAGAGATGCTGGAGAAGAACAAATGGAATTGCTCGTCTGGAGGGCTTTGCAAATaGAGTTTTGATCTTTCAGGG +
Preference number: 4 (lower is better)
Translates to: AFKWALEMLEKNKWNCSSGGLCK*SFDLSG
Trigger: CCCTGAAAGATCAAAACTGCATTTGCAAAGCCCTCC...AGACGAGCAATTCCATTTGTTCTTCTCCAGCATCTCTAAGGCCCACTTGAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp ATATATATGCTTTTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGCAGCTGGACAGGGGAGGGCTTTaGAAATGCAGTTTTGATCTT +
Preference number: 4 (lower is better)
Translates to: IYMLFPSQSLISDSTSQLDRGGL*KCSFDL
Trigger: AAGATCAAAACTGCATTTGCAAAGCCCTCCCCTGTC...CAGCTGCGACGTACTGTCACTGATGAGAGACTGGGAAGGGAAAAGCATATATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp CCCAGCAGCAGTGCAAGGATGCGGTGTTTCCTGTATATATATCTATATCTCTATGTATGGAAAGTGTGCTaGTACACTCAGGGGGAGTTG +
Preference number: 4 (lower is better)
Translates to: PSSSARMRCFLYIYLYLYVWKVC*YTQGEL
Trigger: CAACTCCCCCTGAGTGTAGCAGCACACTTTCCATAC...ATAGAGATATAGATATATATACAGGAAACACCGCATCCTTGCACTGCTGCTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp CCAGCCCCAGCAGCAGTGCAAGGATGCGGTGTTTCCTGTATATATATCTATATCGCATCTGGTTCTTTCTaGTTATTTTGCAAGTCGGGA +
Preference number: 4 (lower is better)
Translates to: PAPAAVQGCGVSCIYIYIASGSF*LFCKSG
Trigger: TCCCGACTTGCAAAATAAGCAGAAAGAACCAGATGC...GATATAGATATATATACAGGAAACACCGCATCCTTGCACTGCTGCTGGGGCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp CCACCAGTTCTTCAATTTGTCTGCAAAGGAAATGTAGGTGTTCAGATGTCGGTTTTCTTGGCAATCTTCTaGGGCGATTTCTGGGCCTTG +
Preference number: 4 (lower is better)
Translates to: PPVLQFVCKGNVGVQMSVFLAIF*GDFWAL
Trigger: CAAGGCCCAGAAATCGCCCCAGAAGATTGCCAAGAA...AACCGACATCTGAACACCTACATTTCCTTTGCAGACAAATTGAAGAACTGGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp CCCAGCAGCAGTGCAAGGATGCGGTGTTTCCTGTATATATATCTATATCTCTATTTCTTGGCAATCTTCTaGGGCGATTTCTGGGCCTTG +
Preference number: 4 (lower is better)
Translates to: PSSSARMRCFLYIYLYLYFLAIF*GDFWAL
Trigger: CAAGGCCCAGAAATCGCCCCAGAAGATTGCCAAGAA...ATAGAGATATAGATATATATACAGGAAACACCGCATCCTTGCACTGCTGCTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp CTTTTCTTTTTCTCATTTCAAAGGAGAGTCATCTGCAGTGGCCCTCAGAAGGACTCATTGATGCTGGCCTaGTGCTTCAGCAAGACATCT +
Preference number: 4 (lower is better)
Translates to: LFFFSFQRRVICSGPQKDSLMLA*CFSKTS
Trigger: AGATGTCTTGCTGAAGCACCAGGCCAGCATCAATGA...GTCCTTCTGAGGGCCACTGCAGATGACTCTCCTTTGAAATGAGAAAAAGAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp ACCAGTTCTTCAATTTGTCTGCAAAGGAAATGTAGGTGTTCAGATGTCGGTTGTAGCACTTGCGCTCAATaGCCAGGTGGTTGTCCTTCA +
Preference number: 4 (lower is better)
Translates to: TSSSICLQRKCRCSDVGCSTCAQ*PGGCPS
Trigger: TGAAGGACAACCACCTGGCCATTGAGCGCAAGTGCT...ACAACCGACATCTGAACACCTACATTTCCTTTGCAGACAAATTGAAGAACTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp TGCTGGAGAAGAACAAATGGAATTGCTCGTCTGCTAACTGTAACGTGCAGAACCCTACTTCCCTTCCTGTaGCTTCGTTTTCTGTTCTTG +
Preference number: 4 (lower is better)
Translates to: CWRRTNGIARLLTVTCRTLLPFL*LRFLFL
Trigger: CAAGAACAGAAAACGAAGCCACAGGAAGGGAAGTAG...GGTTCTGCACGTTACAGTTAGCAGACGAGCAATTCCATTTGTTCTTCTCCAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp GCATTCAAGTGGGCCTTAGAGATGCTGGAGAAGAACAAATGGAATTGCTCGTCTCTACTTCCCTTCCTGTaGCTTCGTTTTCTGTTCTTG +
Preference number: 4 (lower is better)
Translates to: AFKWALEMLEKNKWNCSSLLPFL*LRFLFL
Trigger: CAAGAACAGAAAACGAAGCCACAGGAAGGGAAGTAG...AGACGAGCAATTCCATTTGTTCTTCTCCAGCATCTCTAAGGCCCACTTGAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp TTCAGTGTGCTCAGGACTCCTGGTTCCTGCAAAGATGAGTTCCTAGACCGAAGTACCTCCCTTTGGATATaGAGTTGGTTATTACAATGG +
Preference number: 4 (lower is better)
Translates to: FSVLRTPGSCKDEFLDRSTSLWI*SWLLQW
Trigger: CCATTGTAATAACCAACTCCATATCCAAAGGGAGGT...ACTTCGGTCTAGGAACTCATCTTTGCAGGAACCAGGAGTCCTGAGCACACTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp CCAGCCCCAGCAGCAGTGCAAGGATGCGGTGTTTCCTGTATATATATCTATATCAGCACCACCTCCCTTTaGATATGGAGTTGGTTATTA +
Preference number: 4 (lower is better)
Translates to: PAPAAVQGCGVSCIYIYISTTSL*IWSWLL
Trigger: TAATAACCAACTCCATATCCAAAGGGAGGTGGTGCT...GATATAGATATATATACAGGAAACACCGCATCCTTGCACTGCTGCTGGGGCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp GACTTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGAGGAAAAGGCTTAGCTaGGAATTTTTAGACAGTCAG +
Preference number: 4 (lower is better)
Translates to: DFYNHRGLACVSYLAGERRKRLS*EFLDSQ
Trigger: CTGACTGTCTAAAAATTCCCAGCTAAGCCTTTTCCT...CCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGAAGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp ACCAGTTCTTCAATTTGTCTGCAAAGGAAATGTAGGTGTTCAGATGTCGGTTGTTTCCCCAAACCCTGGTaGCCCATAAACTCCACAAGC +
Preference number: 4 (lower is better)
Translates to: TSSSICLQRKCRCSDVGCFPKPW*PINSTS
Trigger: GCTTGTGGAGTTTATGGGCCACCAGGGTTTGGGGAA...ACAACCGACATCTGAACACCTACATTTCCTTTGCAGACAAATTGAAGAACTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp CCACCAGTTCTTCAATTTGTCTGCAAAGGAAATGTAGGTGTTCAGATGTCGGTTGATTTCCCCAAACCCTaGTGGCCCATAAACTCCACA +
Preference number: 4 (lower is better)
Translates to: PPVLQFVCKGNVGVQMSVDFPKP*WPINST
Trigger: TGTGGAGTTTATGGGCCACCAGGGTTTGGGGAAATC...AACCGACATCTGAACACCTACATTTCCTTTGCAGACAAATTGAAGAACTGGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp ATCTATATATATATGCTTTTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGTTCCACTATGCTACATaGCCTCCTGGGTGGAGAGGT +
Preference number: 4 (lower is better)
Translates to: IYIYMLFPSQSLISDSTSFHYAT*PPGWRG
Trigger: ACCTCTCCACCCAGGAGGCCATGTAGCATAGTGGAA...CGACGTACTGTCACTGATGAGAGACTGGGAAGGGAAAAGCATATATATATAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp ACCAGTTCTTCAATTTGTCTGCAAAGGAAATGTAGGTGTTCAGATGTCGGTTGTTTCCACTATGCTACATaGCCTCCTGGGTGGAGAGGT +
Preference number: 4 (lower is better)
Translates to: TSSSICLQRKCRCSDVGCFHYAT*PPGWRG
Trigger: ACCTCTCCACCCAGGAGGCCATGTAGCATAGTGGAA...ACAACCGACATCTGAACACCTACATTTCCTTTGCAGACAAATTGAAGAACTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp TTAATGGTTCTCTGGCTTGGGTTGGACCAGAAATGCCAGGATCTCTTCACAGAGTCCTGTACCCTCAGATaGAAAAGATCCAGAGAAAAC +
Preference number: 4 (lower is better)
Translates to: LMVLWLGLDQKCQDLFTESCTLR*KRSREN
Trigger: GTTTTCTCTGGATCTTTTCCATCTGAGGGTACAGGA...CTCTGTGAAGAGATCCTGGCATTTCTGGTCCAACCCAAGCCAGAGAACCATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp TCTTCAATTTGTCTGCAAAGGAAATGTAGGTGTTCAGATGTCGGTTGTTGCTGTTTTGGGGAAGTCATGTaGGCTTCGTCCTTGCTCCTG +
Preference number: 4 (lower is better)
Translates to: SSICLQRKCRCSDVGCCCFGEVM*ASSLLL
Trigger: CAGGAGCAAGGACGAAGCCCACATGACTTCCCCAAA...ACAGCAACAACCGACATCTGAACACCTACATTTCCTTTGCAGACAAATTGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS-3UTR CCA 90 bp CATCTTCTACAATGGCTGAGAGCACCACCTCCCTTTGGATATGGAGTTGGTTATCTGGCTTTCGAAAGATaGACATGTCTAAGAAAGGGC +
Preference number: 4 (lower is better)
Translates to: HLLQWLRAPPPFGYGVGYLAFER*TCLRKG
Trigger: GCCCTTTCTTAGACATGTCCATCTTTCGAAAGCCAG...ATAACCAACTCCATATCCAAAGGGAGGTGGTGCTCTCAGCCATTGTAGAAGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS-3UTR TCA 90 bp GTTTTCCTTTGCATTCAAGTGGGCCTTAGAGATGCTGGAGAAGAACAAATGGAAACAGGTAGTATCTTGTaGTGTCTTCTGTCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: VFLCIQVGLRDAGEEQMETGSIL*CLLSAG
Trigger: CCCAGCTGACAGAAGACATCACAAGATACTACCTGT...TTCCATTTGTTCTTCTCCAGCATCTCTAAGGCCCACTTGAATGCAAAGGAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp CCTCCTACAAGCTGCACCTTCATAATGAGAAACCATAAGCATACAATGTCTACTCACAAACGCCTAACATaGTGTCGATGCCCTCAGAGT +
Preference number: 4 (lower is better)
Translates to: PPTSCTFIMRNHKHTMSTHKRLT*CRCPQS
Trigger: ACTCTGAGGGCATCGACATCATGTTAGGCGTTTGTG...AGTAGACATTGTATGCTTATGGTTTCTCATTATGAAGGTGCAGCTTGTAGGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp GTTTTCCTTTGCATTCAAGTGGGCCTTAGAGATGCTGGAGAAGAACAAATGGAATCGGAGAATCCAGAATaGAGGCCCCTTCTTAATGGT +
Preference number: 4 (lower is better)
Translates to: VFLCIQVGLRDAGEEQMESENPE*RPLLNG
Trigger: ACCATTAAGAAGGGGCCTTCATTCTGGATTCTCCGA...TTCCATTTGTTCTTCTCCAGCATCTCTAAGGCCCACTTGAATGCAAAGGAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp ATCTATATATATATGCTTTTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGTTCTCGGAAAATGGTTaGCTGTGCGTGTCTTGCTGC +
Preference number: 4 (lower is better)
Translates to: IYIYMLFPSQSLISDSTSFSENG*LCVSCC
Trigger: GCAGCAAGACACGCACAGTCAACCATTTTCCGAGAA...CGACGTACTGTCACTGATGAGAGACTGGGAAGGGAAAAGCATATATATATAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp TTTCTTTTTCTCATTTCAAAGGAGAGTCATCTGCAGTGGCCCTCAGAAGGACCAAGCCGAGACAGAAAATaGCAGCAAGACATTGAGAGT +
Preference number: 4 (lower is better)
Translates to: FLFLISKESHLQWPSEGPSRDRK*QQDIES
Trigger: ACTCTCAATGTCTTGCTGTCATTTTCTGTCTCGGCT...TGGTCCTTCTGAGGGCCACTGCAGATGACTCTCCTTTGAAATGAGAAAAAGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp GCATTCAAGTGGGCCTTAGAGATGCTGGAGAAGAACAAATGGAATTGCTCGTCTATGGCTACTTTGGCCTaGGAAGAAGAAATGATTCAG +
Preference number: 4 (lower is better)
Translates to: AFKWALEMLEKNKWNCSSMATLA*EEEMIQ
Trigger: CTGAATCATTTCTTCTTCTCAGGCCAAAGTAGCCAT...AGACGAGCAATTCCATTTGTTCTTCTCCAGCATCTCTAAGGCCCACTTGAATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp TTTCTTTTTCTCATTTCAAAGGAGAGTCATCTGCAGTGGCCCTCAGAAGGACCAACATGGTGTACCGTTTaGTGGAAGAACGCTCAAAGA +
Preference number: 4 (lower is better)
Translates to: FLFLISKESHLQWPSEGPTWCTV*WKNAQR
Trigger: TCTTTGAGCGTTCTTCCAGCAAACGGTACACCATGT...TGGTCCTTCTGAGGGCCACTGCAGATGACTCTCCTTTGAAATGAGAAAAAGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp CCCAGCAGCAGTGCAAGGATGCGGTGTTTCCTGTATATATATCTATATCTCTATAGCATATCAGGATGCTaGAGTTTGGCCTCCTTGATG +
Preference number: 4 (lower is better)
Translates to: PSSSARMRCFLYIYLYLYSISGC*SLASLM
Trigger: CATCAAGGAGGCCAAACTGCAGCATCCTGATATGCT...ATAGAGATATAGATATATATACAGGAAACACCGCATCCTTGCACTGCTGCTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp ATCTATATATATATGCTTTTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGGGGTTGGACCAGAAATaGCAGGATCTCTTCACAGAG +
Preference number: 4 (lower is better)
Translates to: IYIYMLFPSQSLISDSTSGLDQK*QDLFTE
Trigger: CTCTGTGAAGAGATCCTGGCATTTCTGGTCCAACCC...CGACGTACTGTCACTGATGAGAGACTGGGAAGGGAAAAGCATATATATATAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp ATCTATATATATATGCTTTTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGTCAGATGTCGGTTGTTaGTGTCAGCCAACTGCTCTG +
Preference number: 4 (lower is better)
Translates to: IYIYMLFPSQSLISDSTSSDVGC*CQPTAL
Trigger: CAGAGCAGTTGGCTGACAGCAACAACCGACATCTGA...CGACGTACTGTCACTGATGAGAGACTGGGAAGGGAAAAGCATATATATATAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp GAAGGCCCCTTCTTAATGGTTCTCTGGCTTGGGTTGGACCAGAAATGCCAGGATGTTCTTCAATTTGTCTaGAAAGGAAATGTAGGTGTT +
Preference number: 4 (lower is better)
Translates to: EGPFLMVLWLGLDQKCQDVLQFV*KGNVGV
Trigger: AACACCTACATTTCCTTTGCAGACAAATTGAAGAAC...ATCCTGGCATTTCTGGTCCAACCCAAGCCAGAGAACCATTAAGAAGGGGCCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp GGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTGAGCAAGGGATTATAGTTCTTCAATTTGTCTaGAAAGGAAATGTAGGTGTT +
Preference number: 4 (lower is better)
Translates to: GLACVSYLAGERGEQGIIVLQFV*KGNVGV
Trigger: AACACCTACATTTCCTTTGCAGACAAATTGAAGAAC...TATAATCCCTTGCTCACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp CATCTTCTACAATGGCTGAGAGCACCACCTCCCTTTGGATATGGAGTTGGTTATGCAAGTGTTTTCCTTTaGATTCAAGTGGGCCTTAGA +
Preference number: 4 (lower is better)
Translates to: HLLQWLRAPPPFGYGVGYASVFL*IQVGLR
Trigger: TCTAAGGCCCACTTGAATGCAAAGGAAAACACTTGC...ATAACCAACTCCATATCCAAAGGGAGGTGGTGCTCTCAGCCATTGTAGAAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp ACTCTCAAGAAGGGCAGGAAGAAGGTTCTGTGGCTTTTCCACCAGGATTGTAGAAAACCTCCTACAAGCTaGACCTTCATAATGAGAAAC +
Preference number: 4 (lower is better)
Translates to: TLKKGRKKVLWLFHQDCRKPPTS*TFIMRN
Trigger: GTTTCTCATTATGAAGGTGCAGCTTGTAGGAGGTTT...TCTACAATCCTGGTGGAAAAGCCACAGAACCTTCTTCCTGCCCTTCTTGAGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp GCCAGTTCAGTGAGATCTAGGAACCTCAGGATACATCAATCACAGTCAGATAATGGACGACATCTGTGTTaGTTCTTTCTTGCCAAACCC +
Preference number: 4 (lower is better)
Translates to: ASSVRSRNLRIHQSQSDNGRHLC*FFLAKP
Trigger: GGGTTTGGCAAGAAAGAAGCAACACAGATGTCGTCC...ATTATCTGACTGTGATTGATGTATCCTGAGGTTCCTAGATCTCACTGAACTGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp ATCTATATATATATGCTTTTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGCAAGCCAAGGTCTTATaGAGAGCTGGAGCCTATGAG +
Preference number: 4 (lower is better)
Translates to: IYIYMLFPSQSLISDSTSQAKVL*RAGAYE
Trigger: CTCATAGGCTCCAGCTCTGCATAAGACCTTGGCTTG...CGACGTACTGTCACTGATGAGAGACTGGGAAGGGAAAAGCATATATATATAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp CCCAGCAGCAGTGCAAGGATGCGGTGTTTCCTGTATATATATCTATATCTCTATCTGAGAAATTCGCAGTaGAGTGGGACATTTTCCCTC +
Preference number: 4 (lower is better)
Translates to: PSSSARMRCFLYIYLYLYLRNSQ*SGTFSL
Trigger: GAGGGAAAATGTCCCACTGCACTGCGAATTTCTCAG...ATAGAGATATAGATATATATACAGGAAACACCGCATCCTTGCACTGCTGCTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp TCTTCAATTTGTCTGCAAAGGAAATGTAGGTGTTCAGATGTCGGTTGTTGCTGTGGACTTTTTCCACTATaGTACATGGCCTCCTGGGTG +
Preference number: 4 (lower is better)
Translates to: SSICLQRKCRCSDVGCCCGLFPL*YMASWV
Trigger: CACCCAGGAGGCCATGTAGCATAGTGGAAAAAGTCC...ACAGCAACAACCGACATCTGAACACCTACATTTCCTTTGCAGACAAATTGAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp TGCTGGAGAAGAACAAATGGAATTGCTCGTCTGCTAACTGTAACGTGCAGAACCGCATCTGGTTCTTTCTaGTTATTTTGCAAGTCGGGA +
Preference number: 4 (lower is better)
Translates to: CWRRTNGIARLLTVTCRTASGSF*LFCKSG
Trigger: TCCCGACTTGCAAAATAAGCAGAAAGAACCAGATGC...GGTTCTGCACGTTACAGTTAGCAGACGAGCAATTCCATTTGTTCTTCTCCAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp CTTTTCTTTTTCTCATTTCAAAGGAGAGTCATCTGCAGTGGCCCTCAGAAGGACCACTTAAGTGGCAGCTaGGATTATCCCCATTTTGCA +
Preference number: 4 (lower is better)
Translates to: LFFFSFQRRVICSGPQKDHLSGS*DYPHFA
Trigger: TGCAAAATGGGGATAATCCCAGCTGCCACTTAAGTG...GTCCTTCTGAGGGCCACTGCAGATGACTCTCCTTTGAAATGAGAAAAAGAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000202028.9
CDS-3UTR CCA 90 bp ACCAGTTCTTCAATTTGTCTGCAAAGGAAATGTAGGTGTTCAGATGTCGGTTGTTCCAGCCAGTTCTTCTaGCTGTCAGCATCACAGAAG +
Preference number: 4 (lower is better)
Translates to: TSSSICLQRKCRCSDVGCSSQFF*LSASQK
Trigger: CTTCTGTGATGCTGACAGCCAGAAGAACTGGCTGGA...ACAACCGACATCTGAACACCTACATTTCCTTTGCAGACAAATTGAAGAACTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp ATCTATATATATATGCTTTTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGTCCAGCCAGTTCTTCTaGCTGTCAGCATCACAGAAG +
Preference number: 4 (lower is better)
Translates to: IYIYMLFPSQSLISDSTSSSQFF*LSASQK
Trigger: CTTCTGTGATGCTGACAGCCAGAAGAACTGGCTGGA...CGACGTACTGTCACTGATGAGAGACTGGGAAGGGAAAAGCATATATATATAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp TTTCTTTTTCTCATTTCAAAGGAGAGTCATCTGCAGTGGCCCTCAGAAGGACCAGGTCTACTCCGTACATaGAAAGCTTCTTGGCATTCT +
Preference number: 4 (lower is better)
Translates to: FLFLISKESHLQWPSEGPGLLRT*KASWHS
Trigger: AGAATGCCAAGAAGCTTTCCATGTACGGAGTAGACC...TGGTCCTTCTGAGGGCCACTGCAGATGACTCTCCTTTGAAATGAGAAAAAGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp GCCAGTTCAGTGAGATCTAGGAACCTCAGGATACATCAATCACAGTCAGATAATTGGTGTACCGTTTGCTaGAAGAACGCTCAAAGAAGG +
Preference number: 4 (lower is better)
Translates to: ASSVRSRNLRIHQSQSDNWCTVC*KNAQRR
Trigger: CCTTCTTTGAGCGTTCTTCCAGCAAACGGTACACCA...ATTATCTGACTGTGATTGATGTATCCTGAGGTTCCTAGATCTCACTGAACTGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp TATATATATATGCTTTTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGCAGTCATTGATGCTGGCCTaGTGCTTCAGCAAGACATCT +
Preference number: 4 (lower is better)
Translates to: YIYMLFPSQSLISDSTSQSLMLA*CFSKTS
Trigger: AGATGTCTTGCTGAAGCACCAGGCCAGCATCAATGA...CTGCGACGTACTGTCACTGATGAGAGACTGGGAAGGGAAAAGCATATATATATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp AGGTTGAAGACAGACAAGACAAACGTCTCTATTCTCTACAAAGAGAAGGATGGGTTGAGACTGTTCTCCTaGGTGTTATCCATAGCGGAG +
Preference number: 4 (lower is better)
Translates to: RLKTDKTNVSILYKEKDGLRLFS*VLSIAE
Trigger: CTCCGCTATGGATAACACCCAGGAGAACAGTCTCAA...CCCATCCTTCTCTTTGTAGAGAATAGAGACGTTTGTCTTGTCTGTCTTCAACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441639.5
CDS-3UTR CCA 90 bp CCTTACCATGGCTACTTTGGCCTGAGAAGAAGAAATGATTCAGAACAAGGAAGAAATGGTTCTCTGGCTTaGGTTGGACCAGAAATGCCA +
Preference number: 4 (lower is better)
Translates to: PYHGYFGLRRRNDSEQGRNGSLA*VGPEMP
Trigger: TGGCATTTCTGGTCCAACCCAAGCCAGAGAACCATT...TCTTCCTTGTTCTGAATCATTTCTTCTTCTCAGGCCAAAGTAGCCATGGTAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp TGCTGGAGAAGAACAAATGGAATTGCTCGTCTGCTAACTGTAACGTGCAGAACCTTCTTAATGGTTCTCTaGCTTGGGTTGGACCAGAAA +
Preference number: 4 (lower is better)
Translates to: CWRRTNGIARLLTVTCRTFLMVL*LGLDQK
Trigger: TTTCTGGTCCAACCCAAGCCAGAGAACCATTAAGAA...GGTTCTGCACGTTACAGTTAGCAGACGAGCAATTCCATTTGTTCTTCTCCAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp GCATTCAAGTGGGCCTTAGAGATGCTGGAGAAGAACAAATGGAATTGCTCGTCTACAATCATCGTGGTCTaGCTTGCGTTTCTTATTTGG +
Preference number: 4 (lower is better)
Translates to: AFKWALEMLEKNKWNCSSTIIVV*LAFLIW
Trigger: CCAAATAAGAAACGCAAGCCAGACCACGATGATTGT...AGACGAGCAATTCCATTTGTTCTTCTCCAGCATCTCTAAGGCCCACTTGAATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp TGCTGGAGAAGAACAAATGGAATTGCTCGTCTGCTAACTGTAACGTGCAGAACCCTTCTACAATCATCGTaGTCTGGCTTGCGTTTCTTA +
Preference number: 4 (lower is better)
Translates to: CWRRTNGIARLLTVTCRTLLQSS*SGLRFL
Trigger: TAAGAAACGCAAGCCAGACCACGATGATTGTAGAAG...GGTTCTGCACGTTACAGTTAGCAGACGAGCAATTCCATTTGTTCTTCTCCAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp GTTTTCCTTTGCATTCAAGTGGGCCTTAGAGATGCTGGAGAAGAACAAATGGAATCCTTTGCATTCAAGTaGGCCTTAGAGATGCTGGAG +
Preference number: 4 (lower is better)
Translates to: VFLCIQVGLRDAGEEQMESFAFK*ALEMLE
Trigger: CTCCAGCATCTCTAAGGCCCACTTGAATGCAAAGGA...TTCCATTTGTTCTTCTCCAGCATCTCTAAGGCCCACTTGAATGCAAAGGAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp CCTTACCATGGCTACTTTGGCCTGAGAAGAAGAAATGATTCAGAACAAGGAAGACTTGAACTGGCATTTTaGGGACGACATCTGTGTTGC +
Preference number: 4 (lower is better)
Translates to: PYHGYFGLRRRNDSEQGRLELAF*GRHLCC
Trigger: GCAACACAGATGTCGTCCCCAAAATGCCAGTTCAAG...TCTTCCTTGTTCTGAATCATTTCTTCTTCTCAGGCCAAAGTAGCCATGGTAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp TCCCACCTTCTTCAGCCTGAGAATAGTCCCTGGCACAAGCAGGTAATCAGTAAAATTGTAGAAAGAACCTaGTGTATGGAAAGTGTGCTG +
Preference number: 4 (lower is better)
Translates to: SHLLQPENSPWHKQVISKIVERT*CMESVL
Trigger: CAGCACACTTTCCATACACCAGGTTCTTTCTACAAT...TTTACTGATTACCTGCTTGTGCCAGGGACTATTCTCAGGCTGAAGAAGGTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp CCTCCTACAAGCTGCACCTTCATAATGAGAAACCATAAGCATACAATGTCTACTGATTTCCCCAAACCCTaGTGGCCCATAAACTCCACA +
Preference number: 4 (lower is better)
Translates to: PPTSCTFIMRNHKHTMSTDFPKP*WPINST
Trigger: TGTGGAGTTTATGGGCCACCAGGGTTTGGGGAAATC...AGTAGACATTGTATGCTTATGGTTTCTCATTATGAAGGTGCAGCTTGTAGGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp CATCTTCTACAATGGCTGAGAGCACCACCTCCCTTTGGATATGGAGTTGGTTATAGTAGAAAAAGACCCTaGAGAGCATCTGGTTCTTTC +
Preference number: 4 (lower is better)
Translates to: HLLQWLRAPPPFGYGVGYSRKRP*RASGSF
Trigger: GAAAGAACCAGATGCTCTCCAGGGTCTTTTTCTACT...ATAACCAACTCCATATCCAAAGGGAGGTGGTGCTCTCAGCCATTGTAGAAGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp GCATTCAAGTGGGCCTTAGAGATGCTGGAGAAGAACAAATGGAATTGCTCGTCTTCCTGTACCCTCAGATaGAAAAGATCCAGAGAAAAC +
Preference number: 4 (lower is better)
Translates to: AFKWALEMLEKNKWNCSSSCTLR*KRSREN
Trigger: GTTTTCTCTGGATCTTTTCCATCTGAGGGTACAGGA...AGACGAGCAATTCCATTTGTTCTTCTCCAGCATCTCTAAGGCCCACTTGAATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp TATATATATATGCTTTTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGCAGGTTTCAGGCCAGTCTTaGAATGTGCTTGCAGGATTC +
Preference number: 4 (lower is better)
Translates to: YIYMLFPSQSLISDSTSQVSGQS*NVLAGF
Trigger: GAATCCTGCAAGCACATTCCAAGACTGGCCTGAAAC...CTGCGACGTACTGTCACTGATGAGAGACTGGGAAGGGAAAAGCATATATATATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp CCTCCTACAAGCTGCACCTTCATAATGAGAAACCATAAGCATACAATGTCTACTACAGGTAGTATCTTGTaGTGTCTTCTGTCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: PPTSCTFIMRNHKHTMSTTGSIL*CLLSAG
Trigger: CCCAGCTGACAGAAGACATCACAAGATACTACCTGT...AGTAGACATTGTATGCTTATGGTTTCTCATTATGAAGGTGCAGCTTGTAGGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp ATCTATATATATATGCTTTTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGTCGGAGAATCCAGAATaGAGGCCCCTTCTTAATGGT +
Preference number: 4 (lower is better)
Translates to: IYIYMLFPSQSLISDSTSSENPE*RPLLNG
Trigger: ACCATTAAGAAGGGGCCTTCATTCTGGATTCTCCGA...CGACGTACTGTCACTGATGAGAGACTGGGAAGGGAAAAGCATATATATATAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp CCACCAGTTCTTCAATTTGTCTGCAAAGGAAATGTAGGTGTTCAGATGTCGGTTAGCCGAGACAGAAAATaGCAGCAAGACATTGAGAGT +
Preference number: 4 (lower is better)
Translates to: PPVLQFVCKGNVGVQMSVSRDRK*QQDIES
Trigger: ACTCTCAATGTCTTGCTGTCATTTTCTGTCTCGGCT...AACCGACATCTGAACACCTACATTTCCTTTGCAGACAAATTGAAGAACTGGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp TTTCTTTTTCTCATTTCAAAGGAGAGTCATCTGCAGTGGCCCTCAGAAGGACCAATGGCTACTTTGGCCTaGGAAGAAGAAATGATTCAG +
Preference number: 4 (lower is better)
Translates to: FLFLISKESHLQWPSEGPMATLA*EEEMIQ
Trigger: CTGAATCATTTCTTCTTCTCAGGCCAAAGTAGCCAT...TGGTCCTTCTGAGGGCCACTGCAGATGACTCTCCTTTGAAATGAGAAAAAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp CCTCCTACAAGCTGCACCTTCATAATGAGAAACCATAAGCATACAATGTCTACTTTGCAAATGCAGTTTTaGTCTTTCAGGGTCTGCCCC +
Preference number: 4 (lower is better)
Translates to: PPTSCTFIMRNHKHTMSTLQMQF*SFRVCP
Trigger: GGGGCAGACCCTGAAAGATCAAAACTGCATTTGCAA...AGTAGACATTGTATGCTTATGGTTTCTCATTATGAAGGTGCAGCTTGTAGGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp ATCTATATATATATGCTTTTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGAAGCAAATGCTATTCTaGTTTCCTGCCCTGCCTCAG +
Preference number: 4 (lower is better)
Translates to: IYIYMLFPSQSLISDSTSKQMLF*FPALPQ
Trigger: CTGAGGCAGGGCAGGAAATCAGAATAGCATTTGCTT...CGACGTACTGTCACTGATGAGAGACTGGGAAGGGAAAAGCATATATATATAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp AGGTTGAAGACAGACAAGACAAACGTCTCTATTCTCTACAAAGAGAAGGATGGGATGTATGATGCTCGATaGAGACCTTCCACAGTCTCT +
Preference number: 4 (lower is better)
Translates to: RLKTDKTNVSILYKEKDGMYDAR*RPSTVS
Trigger: AGAGACTGTGGAAGGTCTGCATCGAGCATCATACAT...CCCATCCTTCTCTTTGTAGAGAATAGAGACGTTTGTCTTGTCTGTCTTCAACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp CCTTACCATGGCTACTTTGGCCTGAGAAGAAGAAATGATTCAGAACAAGGAAGAATGTATGATGCTCGATaGAGACCTTCCACAGTCTCT +
Preference number: 4 (lower is better)
Translates to: PYHGYFGLRRRNDSEQGRMYDAR*RPSTVS
Trigger: AGAGACTGTGGAAGGTCTGCATCGAGCATCATACAT...TCTTCCTTGTTCTGAATCATTTCTTCTTCTCAGGCCAAAGTAGCCATGGTAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp TATATATATATGCTTTTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGCAGACATGGTGTACCGTTTaGTGGAAGAACGCTCAAAGA +
Preference number: 4 (lower is better)
Translates to: YIYMLFPSQSLISDSTSQTWCTV*WKNAQR
Trigger: TCTTTGAGCGTTCTTCCAGCAAACGGTACACCATGT...CTGCGACGTACTGTCACTGATGAGAGACTGGGAAGGGAAAAGCATATATATATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp CCTCCTACAAGCTGCACCTTCATAATGAGAAACCATAAGCATACAATGTCTACTTTGATGCTGGCCTGGTaGTTCAGCAAGACATCTTCT +
Preference number: 4 (lower is better)
Translates to: PPTSCTFIMRNHKHTMSTLMLAW*FSKTSS
Trigger: AGAAGATGTCTTGCTGAAGCACCAGGCCAGCATCAA...AGTAGACATTGTATGCTTATGGTTTCTCATTATGAAGGTGCAGCTTGTAGGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp AGGAAATGTAGGTGTTCAGATGTCGGTTGTTGCTGTCAGCCAACTGCTCTGCCAGTTCTTCAATTTGTCTaGAAAGGAAATGTAGGTGTT +
Preference number: 4 (lower is better)
Translates to: RKCRCSDVGCCCQPTALPVLQFV*KGNVGV
Trigger: AACACCTACATTTCCTTTGCAGACAAATTGAAGAAC...TGGCAGAGCAGTTGGCTGACAGCAACAACCGACATCTGAACACCTACATTTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp CTGCCAGCCCCAGCAGCAGTGCAAGGATGCGGTGTTTCCTGTATATATATCTATGTTCTTCAATTTGTCTaGAAAGGAAATGTAGGTGTT +
Preference number: 4 (lower is better)
Translates to: LPAPAAVQGCGVSCIYIYVLQFV*KGNVGV
Trigger: AACACCTACATTTCCTTTGCAGACAAATTGAAGAAC...ATAGATATATATACAGGAAACACCGCATCCTTGCACTGCTGCTGGGGCTGGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp ATATATATGCTTTTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGCAGCTGAAACCTCCTACAAGCTaGACCTTCATAATGAGAAAC +
Preference number: 4 (lower is better)
Translates to: IYMLFPSQSLISDSTSQLKPPTS*TFIMRN
Trigger: GTTTCTCATTATGAAGGTGCAGCTTGTAGGAGGTTT...CAGCTGCGACGTACTGTCACTGATGAGAGACTGGGAAGGGAAAAGCATATATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp GCCAGTTCAGTGAGATCTAGGAACCTCAGGATACATCAATCACAGTCAGATAATGACAGGGGAGGGCTTTaGAAATGCAGTTTTGATCTT +
Preference number: 4 (lower is better)
Translates to: ASSVRSRNLRIHQSQSDNDRGGL*KCSFDL
Trigger: AAGATCAAAACTGCATTTGCAAAGCCCTCCCCTGTC...ATTATCTGACTGTGATTGATGTATCCTGAGGTTCCTAGATCTCACTGAACTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp ATCTATATATATATGCTTTTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGCTGAGAAATTCGCAGTaGAGTGGGACATTTTCCCTC +
Preference number: 4 (lower is better)
Translates to: IYIYMLFPSQSLISDSTSLRNSQ*SGTFSL
Trigger: GAGGGAAAATGTCCCACTGCACTGCGAATTTCTCAG...CGACGTACTGTCACTGATGAGAGACTGGGAAGGGAAAAGCATATATATATAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp ATCTATATATATATGCTTTTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGCTTGTCTCACTTAAGTaGCAGCTGGGATTATCCCCA +
Preference number: 4 (lower is better)
Translates to: IYIYMLFPSQSLISDSTSLVSLK*QLGLSP
Trigger: TGGGGATAATCCCAGCTGCCACTTAAGTGAGACAAG...CGACGTACTGTCACTGATGAGAGACTGGGAAGGGAAAAGCATATATATATAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000202028.9
CDS-3UTR CCA 90 bp CCCAGCAGCAGTGCAAGGATGCGGTGTTTCCTGTATATATATCTATATCTCTATGGTCTACTCCGTACATaGAAAGCTTCTTGGCATTCT +
Preference number: 4 (lower is better)
Translates to: PSSSARMRCFLYIYLYLYGLLRT*KASWHS
Trigger: AGAATGCCAAGAAGCTTTCCATGTACGGAGTAGACC...ATAGAGATATAGATATATATACAGGAAACACCGCATCCTTGCACTGCTGCTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp ACCAGTTCTTCAATTTGTCTGCAAAGGAAATGTAGGTGTTCAGATGTCGGTTGTTCATTGATGCTGGCCTaGTGCTTCAGCAAGACATCT +
Preference number: 4 (lower is better)
Translates to: TSSSICLQRKCRCSDVGCSLMLA*CFSKTS
Trigger: AGATGTCTTGCTGAAGCACCAGGCCAGCATCAATGA...ACAACCGACATCTGAACACCTACATTTCCTTTGCAGACAAATTGAAGAACTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp GCATTCAAGTGGGCCTTAGAGATGCTGGAGAAGAACAAATGGAATTGCTCGTCTTGTATACGACAGCTTTaGTTACCAGCATATCAGGAT +
Preference number: 4 (lower is better)
Translates to: AFKWALEMLEKNKWNCSSCIRQL*LPAYQD
Trigger: ATCCTGATATGCTGGTAACCAAAGCTGTCGTATACA...AGACGAGCAATTCCATTTGTTCTTCTCCAGCATCTCTAAGGCCCACTTGAATGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp TGCTGGAGAAGAACAAATGGAATTGCTCGTCTGCTAACTGTAACGTGCAGAACCTGTATACGACAGCTTTaGTTACCAGCATATCAGGAT +
Preference number: 4 (lower is better)
Translates to: CWRRTNGIARLLTVTCRTCIRQL*LPAYQD
Trigger: ATCCTGATATGCTGGTAACCAAAGCTGTCGTATACA...GGTTCTGCACGTTACAGTTAGCAGACGAGCAATTCCATTTGTTCTTCTCCAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp ACCAGTTCTTCAATTTGTCTGCAAAGGAAATGTAGGTGTTCAGATGTCGGTTGTAATGGTTCTCTGGCTTaGGTTGGACCAGAAATGCCA +
Preference number: 4 (lower is better)
Translates to: TSSSICLQRKCRCSDVGCNGSLA*VGPEMP
Trigger: TGGCATTTCTGGTCCAACCCAAGCCAGAGAACCATT...ACAACCGACATCTGAACACCTACATTTCCTTTGCAGACAAATTGAAGAACTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp TTTCTTTTTCTCATTTCAAAGGAGAGTCATCTGCAGTGGCCCTCAGAAGGACCATTCTTAATGGTTCTCTaGCTTGGGTTGGACCAGAAA +
Preference number: 4 (lower is better)
Translates to: FLFLISKESHLQWPSEGPFLMVL*LGLDQK
Trigger: TTTCTGGTCCAACCCAAGCCAGAGAACCATTAAGAA...TGGTCCTTCTGAGGGCCACTGCAGATGACTCTCCTTTGAAATGAGAAAAAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp CTTTTCTTTTTCTCATTTCAAAGGAGAGTCATCTGCAGTGGCCCTCAGAAGGACACAATCATCGTGGTCTaGCTTGCGTTTCTTATTTGG +
Preference number: 4 (lower is better)
Translates to: LFFFSFQRRVICSGPQKDTIIVV*LAFLIW
Trigger: CCAAATAAGAAACGCAAGCCAGACCACGATGATTGT...GTCCTTCTGAGGGCCACTGCAGATGACTCTCCTTTGAAATGAGAAAAAGAAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp CTTTTCTTTTTCTCATTTCAAAGGAGAGTCATCTGCAGTGGCCCTCAGAAGGACCTTCTACAATCATCGTaGTCTGGCTTGCGTTTCTTA +
Preference number: 4 (lower is better)
Translates to: LFFFSFQRRVICSGPQKDLLQSS*SGLRFL
Trigger: TAAGAAACGCAAGCCAGACCACGATGATTGTAGAAG...GTCCTTCTGAGGGCCACTGCAGATGACTCTCCTTTGAAATGAGAAAAAGAAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp TCTTCAATTTGTCTGCAAAGGAAATGTAGGTGTTCAGATGTCGGTTGTTGCTGTGAAGGTGTCTTGAACTaGCATTTTGGGGACGACATC +
Preference number: 4 (lower is better)
Translates to: SSICLQRKCRCSDVGCCCEGVLN*HFGDDI
Trigger: GATGTCGTCCCCAAAATGCCAGTTCAAGACACCTTC...ACAGCAACAACCGACATCTGAACACCTACATTTCCTTTGCAGACAAATTGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp GAAGGTGTCTTGAACTGGCATTTTGGGGACGACATCTGTGTTGCTTCTTTCTTGACCTCCCTTTGGATATaGAGTTGGTTATTACAATGG +
Preference number: 4 (lower is better)
Translates to: EGVLNWHFGDDICVASFLTSLWI*SWLLQW
Trigger: CCATTGTAATAACCAACTCCATATCCAAAGGGAGGT...CAAGAAAGAAGCAACACAGATGTCGTCCCCAAAATGCCAGTTCAAGACACCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp CCTCCTACAAGCTGCACCTTCATAATGAGAAACCATAAGCATACAATGTCTACTCTTGAAGGGTTCCTGTaGTCTTGGGGTAATTTCTGG +
Preference number: 4 (lower is better)
Translates to: PPTSCTFIMRNHKHTMSTLEGFL*SWGNFW
Trigger: CCAGAAATTACCCCAAGACCACAGGAACCCTTCAAG...AGTAGACATTGTATGCTTATGGTTTCTCATTATGAAGGTGCAGCTTGTAGGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp ATCTATATATATATGCTTTTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGCTTGAAGGGTTCCTGTaGTCTTGGGGTAATTTCTGG +
Preference number: 4 (lower is better)
Translates to: IYIYMLFPSQSLISDSTSLEGFL*SWGNFW
Trigger: CCAGAAATTACCCCAAGACCACAGGAACCCTTCAAG...CGACGTACTGTCACTGATGAGAGACTGGGAAGGGAAAAGCATATATATATAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp ATCTATATATATATGCTTTTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGCAGATGGGCCAGCCATaGTTGAAATATAAAGCTGGC +
Preference number: 4 (lower is better)
Translates to: IYIYMLFPSQSLISDSTSQMGQP*LKYKAG
Trigger: GCCAGCTTTATATTTCAACCATGGCTGGCCCATCTG...CGACGTACTGTCACTGATGAGAGACTGGGAAGGGAAAAGCATATATATATAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp CATCTTCTACAATGGCTGAGAGCACCACCTCCCTTTGGATATGGAGTTGGTTATATTGTAGAAAGAACCTaGTGTATGGAAAGTGTGCTG +
Preference number: 4 (lower is better)
Translates to: HLLQWLRAPPPFGYGVGYIVERT*CMESVL
Trigger: CAGCACACTTTCCATACACCAGGTTCTTTCTACAAT...ATAACCAACTCCATATCCAAAGGGAGGTGGTGCTCTCAGCCATTGTAGAAGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp ACCAGTTCTTCAATTTGTCTGCAAAGGAAATGTAGGTGTTCAGATGTCGGTTGTGTTTCAGGCCAGTCTTaGAATGTGCTTGCAGGATTC +
Preference number: 4 (lower is better)
Translates to: TSSSICLQRKCRCSDVGCVSGQS*NVLAGF
Trigger: GAATCCTGCAAGCACATTCCAAGACTGGCCTGAAAC...ACAACCGACATCTGAACACCTACATTTCCTTTGCAGACAAATTGAAGAACTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR TCA 90 bp ACCAGTTCTTCAATTTGTCTGCAAAGGAAATGTAGGTGTTCAGATGTCGGTTGTAGCCGAGACAGAAAATaGCAGCAAGACATTGAGAGT +
Preference number: 4 (lower is better)
Translates to: TSSSICLQRKCRCSDVGCSRDRK*QQDIES
Trigger: ACTCTCAATGTCTTGCTGTCATTTTCTGTCTCGGCT...ACAACCGACATCTGAACACCTACATTTCCTTTGCAGACAAATTGAAGAACTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp CCTCCTACAAGCTGCACCTTCATAATGAGAAACCATAAGCATACAATGTCTACTAGCCGAGACAGAAAATaGCAGCAAGACATTGAGAGT +
Preference number: 4 (lower is better)
Translates to: PPTSCTFIMRNHKHTMSTSRDRK*QQDIES
Trigger: ACTCTCAATGTCTTGCTGTCATTTTCTGTCTCGGCT...AGTAGACATTGTATGCTTATGGTTTCTCATTATGAAGGTGCAGCTTGTAGGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR TCA 90 bp CCTTACCATGGCTACTTTGGCCTGAGAAGAAGAAATGATTCAGAACAAGGAAGAATGGCTACTTTGGCCTaGGAAGAAGAAATGATTCAG +
Preference number: 4 (lower is better)
Translates to: PYHGYFGLRRRNDSEQGRMATLA*EEEMIQ
Trigger: CTGAATCATTTCTTCTTCTCAGGCCAAAGTAGCCAT...TCTTCCTTGTTCTGAATCATTTCTTCTTCTCAGGCCAAAGTAGCCATGGTAAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp TCTTCAATTTGTCTGCAAAGGAAATGTAGGTGTTCAGATGTCGGTTGTTGCTGTGCAGCAGTGCAAGGATaGGGTGTTTCCTGTATATAT +
Preference number: 4 (lower is better)
Translates to: SSICLQRKCRCSDVGCCCAAVQG*GVSCIY
Trigger: ATATATACAGGAAACACCGCATCCTTGCACTGCTGC...ACAGCAACAACCGACATCTGAACACCTACATTTCCTTTGCAGACAAATTGAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp CCACCAGTTCTTCAATTTGTCTGCAAAGGAAATGTAGGTGTTCAGATGTCGGTTGCAAGTGTTTTCCTTTaGATTCAAGTGGGCCTTAGA +
Preference number: 4 (lower is better)
Translates to: PPVLQFVCKGNVGVQMSVASVFL*IQVGLR
Trigger: TCTAAGGCCCACTTGAATGCAAAGGAAAACACTTGC...AACCGACATCTGAACACCTACATTTCCTTTGCAGACAAATTGAAGAACTGGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp GCCAGTTCAGTGAGATCTAGGAACCTCAGGATACATCAATCACAGTCAGATAATGCATCTGGTTCTTTCTaGTTATTTTGCAAGTCGGGA +
Preference number: 4 (lower is better)
Translates to: ASSVRSRNLRIHQSQSDNASGSF*LFCKSG
Trigger: TCCCGACTTGCAAAATAAGCAGAAAGAACCAGATGC...ATTATCTGACTGTGATTGATGTATCCTGAGGTTCCTAGATCTCACTGAACTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp TTTCTTTTTCTCATTTCAAAGGAGAGTCATCTGCAGTGGCCCTCAGAAGGACCATGTATACGACAGCTTTaGTTACCAGCATATCAGGAT +
Preference number: 4 (lower is better)
Translates to: FLFLISKESHLQWPSEGPCIRQL*LPAYQD
Trigger: ATCCTGATATGCTGGTAACCAAAGCTGTCGTATACA...TGGTCCTTCTGAGGGCCACTGCAGATGACTCTCCTTTGAAATGAGAAAAAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp ACCAGTTCTTCAATTTGTCTGCAAAGGAAATGTAGGTGTTCAGATGTCGGTTGTAGTTGGTTATTACAATaGGGTCAGGGAAGGGCAGAA +
Preference number: 4 (lower is better)
Translates to: TSSSICLQRKCRCSDVGCSWLLQ*GQGRAE
Trigger: TTCTGCCCTTCCCTGACCCCATTGTAATAACCAACT...ACAACCGACATCTGAACACCTACATTTCCTTTGCAGACAAATTGAAGAACTGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp GTTTTCCTTTGCATTCAAGTGGGCCTTAGAGATGCTGGAGAAGAACAAATGGAAAGCACCACCTCCCTTTaGATATGGAGTTGGTTATTA +
Preference number: 4 (lower is better)
Translates to: VFLCIQVGLRDAGEEQMESTTSL*IWSWLL
Trigger: TAATAACCAACTCCATATCCAAAGGGAGGTGGTGCT...TTCCATTTGTTCTTCTCCAGCATCTCTAAGGCCCACTTGAATGCAAAGGAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp TATATATATATGCTTTTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGCAGAAATTCGCAGTGCAGTaGGACATTTTCCCTCATCAA +
Preference number: 4 (lower is better)
Translates to: YIYMLFPSQSLISDSTSQKFAVQ*DIFPHQ
Trigger: TTGATGAGGGAAAATGTCCCACTGCACTGCGAATTT...CTGCGACGTACTGTCACTGATGAGAGACTGGGAAGGGAAAAGCATATATATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp TATATATATATGCTTTTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGCAGACCCTGGAGAGCATCTaGTTCTTTCTGCTTATTTTG +
Preference number: 4 (lower is better)
Translates to: YIYMLFPSQSLISDSTSQTLESI*FFLLIL
Trigger: CAAAATAAGCAGAAAGAACCAGATGCTCTCCAGGGT...CTGCGACGTACTGTCACTGATGAGAGACTGGGAAGGGAAAAGCATATATATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp CCTTACCATGGCTACTTTGGCCTGAGAAGAAGAAATGATTCAGAACAAGGAAGATCCTGTACCCTCAGATaGAAAAGATCCAGAGAAAAC +
Preference number: 4 (lower is better)
Translates to: PYHGYFGLRRRNDSEQGRSCTLR*KRSREN
Trigger: GTTTTCTCTGGATCTTTTCCATCTGAGGGTACAGGA...TCTTCCTTGTTCTGAATCATTTCTTCTTCTCAGGCCAAAGTAGCCATGGTAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp GTTTTCCTTTGCATTCAAGTGGGCCTTAGAGATGCTGGAGAAGAACAAATGGAATCCTGTACCCTCAGATaGAAAAGATCCAGAGAAAAC +
Preference number: 4 (lower is better)
Translates to: VFLCIQVGLRDAGEEQMESCTLR*KRSREN
Trigger: GTTTTCTCTGGATCTTTTCCATCTGAGGGTACAGGA...TTCCATTTGTTCTTCTCCAGCATCTCTAAGGCCCACTTGAATGCAAAGGAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp TCTTCAATTTGTCTGCAAAGGAAATGTAGGTGTTCAGATGTCGGTTGTTGCTGTCGAGTTTCAGCTCCGTaGGTCTCAAATATCCGAATT +
Preference number: 4 (lower is better)
Translates to: SSICLQRKCRCSDVGCCCRVSAP*VSNIRI
Trigger: AATTCGGATATTTGAGACCCACGGAGCTGAAACTCG...ACAGCAACAACCGACATCTGAACACCTACATTTCCTTTGCAGACAAATTGAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS-3UTR GCA 90 bp GCATTCAAGTGGGCCTTAGAGATGCTGGAGAAGAACAAATGGAATTGCTCGTCTGTTCTTCAATTTGTCTaGAAAGGAAATGTAGGTGTT +
Preference number: 4 (lower is better)
Translates to: AFKWALEMLEKNKWNCSSVLQFV*KGNVGV
Trigger: AACACCTACATTTCCTTTGCAGACAAATTGAAGAAC...AGACGAGCAATTCCATTTGTTCTTCTCCAGCATCTCTAAGGCCCACTTGAATGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp CTTTTCTTTTTCTCATTTCAAAGGAGAGTCATCTGCAGTGGCCCTCAGAAGGACAAGAACAAATGGAATTaGTCGTCTGCTAACTGTAAC +
Preference number: 4 (lower is better)
Translates to: LFFFSFQRRVICSGPQKDKNKWN*SSANCN
Trigger: GTTACAGTTAGCAGACGAGCAATTCCATTTGTTCTT...GTCCTTCTGAGGGCCACTGCAGATGACTCTCCTTTGAAATGAGAAAAAGAAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp TATATATATATGCTTTTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGCAGAAACCTCCTACAAGCTaGACCTTCATAATGAGAAAC +
Preference number: 4 (lower is better)
Translates to: YIYMLFPSQSLISDSTSQKPPTS*TFIMRN
Trigger: GTTTCTCATTATGAAGGTGCAGCTTGTAGGAGGTTT...CTGCGACGTACTGTCACTGATGAGAGACTGGGAAGGGAAAAGCATATATATATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp GTTTTCCTTTGCATTCAAGTGGGCCTTAGAGATGCTGGAGAAGAACAAATGGAAATCATTTTTCCTTGTTaGTGGGTGTTTGCTCTTCTG +
Preference number: 4 (lower is better)
Translates to: VFLCIQVGLRDAGEEQMEIIFPC*WVFALL
Trigger: CAGAAGAGCAAACACCCAGCAACAAGGAAAAATGAT...TTCCATTTGTTCTTCTCCAGCATCTCTAAGGCCCACTTGAATGCAAAGGAAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS-3UTR GCA 90 bp CCCAGCAGCAGTGCAAGGATGCGGTGTTTCCTGTATATATATCTATATCTCTATAAGTATCAGTTTCATTaGTCAACTCAGCTCTGGCTT +
Preference number: 4 (lower is better)
Translates to: PSSSARMRCFLYIYLYLYKYQFH*STQLWL
Trigger: AAGCCAGAGCTGAGTTGAGCAATGAAACTGATACTT...ATAGAGATATAGATATATATACAGGAAACACCGCATCCTTGCACTGCTGCTGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS-3UTR CCA 90 bp AGGTTGAAGACAGACAAGACAAACGTCTCTATTCTCTACAAAGAGAAGGATGGGTGTATACGACAGCTTTaGTTACCAGCATATCAGGAT +
Preference number: 4 (lower is better)
Translates to: RLKTDKTNVSILYKEKDGCIRQL*LPAYQD
Trigger: ATCCTGATATGCTGGTAACCAAAGCTGTCGTATACA...CCCATCCTTCTCTTTGTAGAGAATAGAGACGTTTGTCTTGTCTGTCTTCAACCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp GTTTTCCTTTGCATTCAAGTGGGCCTTAGAGATGCTGGAGAAGAACAAATGGAATGTATACGACAGCTTTaGTTACCAGCATATCAGGAT +
Preference number: 4 (lower is better)
Translates to: VFLCIQVGLRDAGEEQMECIRQL*LPAYQD
Trigger: ATCCTGATATGCTGGTAACCAAAGCTGTCGTATACA...TTCCATTTGTTCTTCTCCAGCATCTCTAAGGCCCACTTGAATGCAAAGGAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp ACCAGTTCTTCAATTTGTCTGCAAAGGAAATGTAGGTGTTCAGATGTCGGTTGTTTCTTAATGGTTCTCTaGCTTGGGTTGGACCAGAAA +
Preference number: 4 (lower is better)
Translates to: TSSSICLQRKCRCSDVGCFLMVL*LGLDQK
Trigger: TTTCTGGTCCAACCCAAGCCAGAGAACCATTAAGAA...ACAACCGACATCTGAACACCTACATTTCCTTTGCAGACAAATTGAAGAACTGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp CCTCCTACAAGCTGCACCTTCATAATGAGAAACCATAAGCATACAATGTCTACTTTCTTAATGGTTCTCTaGCTTGGGTTGGACCAGAAA +
Preference number: 4 (lower is better)
Translates to: PPTSCTFIMRNHKHTMSTFLMVL*LGLDQK
Trigger: TTTCTGGTCCAACCCAAGCCAGAGAACCATTAAGAA...AGTAGACATTGTATGCTTATGGTTTCTCATTATGAAGGTGCAGCTTGTAGGAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp TCTTCAATTTGTCTGCAAAGGAAATGTAGGTGTTCAGATGTCGGTTGTTGCTGTCTTCTACAATCATCGTaGTCTGGCTTGCGTTTCTTA +
Preference number: 4 (lower is better)
Translates to: SSICLQRKCRCSDVGCCCLLQSS*SGLRFL
Trigger: TAAGAAACGCAAGCCAGACCACGATGATTGTAGAAG...ACAGCAACAACCGACATCTGAACACCTACATTTCCTTTGCAGACAAATTGAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp GCCAGTTCAGTGAGATCTAGGAACCTCAGGATACATCAATCACAGTCAGATAATCTTTGGATATGGAGTTaGTTATTACAATGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: ASSVRSRNLRIHQSQSDNLWIWS*LLQWGQ
Trigger: CTGACCCCATTGTAATAACCAACTCCATATCCAAAG...ATTATCTGACTGTGATTGATGTATCCTGAGGTTCCTAGATCTCACTGAACTGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp AGGTTGAAGACAGACAAGACAAACGTCTCTATTCTCTACAAAGAGAAGGATGGGACCTCCCTTTGGATATaGAGTTGGTTATTACAATGG +
Preference number: 4 (lower is better)
Translates to: RLKTDKTNVSILYKEKDGTSLWI*SWLLQW
Trigger: CCATTGTAATAACCAACTCCATATCCAAAGGGAGGT...CCCATCCTTCTCTTTGTAGAGAATAGAGACGTTTGTCTTGTCTGTCTTCAACCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp ATCTATATATATATGCTTTTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGAGCACCACCTCCCTTTaGATATGGAGTTGGTTATTA +
Preference number: 4 (lower is better)
Translates to: IYIYMLFPSQSLISDSTSSTTSL*IWSWLL
Trigger: TAATAACCAACTCCATATCCAAAGGGAGGTGGTGCT...CGACGTACTGTCACTGATGAGAGACTGGGAAGGGAAAAGCATATATATATAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CCA 90 bp ACCAGTTCTTCAATTTGTCTGCAAAGGAAATGTAGGTGTTCAGATGTCGGTTGTACCCTGGAGAGCATCTaGTTCTTTCTGCTTATTTTG +
Preference number: 4 (lower is better)
Translates to: TSSSICLQRKCRCSDVGCTLESI*FFLLIL
Trigger: CAAAATAAGCAGAAAGAACCAGATGCTCTCCAGGGT...ACAACCGACATCTGAACACCTACATTTCCTTTGCAGACAAATTGAAGAACTGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp TATATATATATGCTTTTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGCAGAAGAACAAATGGAATTaGTCGTCTGCTAACTGTAAC +
Preference number: 4 (lower is better)
Translates to: YIYMLFPSQSLISDSTSQKNKWN*SSANCN
Trigger: GTTACAGTTAGCAGACGAGCAATTCCATTTGTTCTT...CTGCGACGTACTGTCACTGATGAGAGACTGGGAAGGGAAAAGCATATATATATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp ACCAGTTCTTCAATTTGTCTGCAAAGGAAATGTAGGTGTTCAGATGTCGGTTGTAAACCTCCTACAAGCTaGACCTTCATAATGAGAAAC +
Preference number: 4 (lower is better)
Translates to: TSSSICLQRKCRCSDVGCKPPTS*TFIMRN
Trigger: GTTTCTCATTATGAAGGTGCAGCTTGTAGGAGGTTT...ACAACCGACATCTGAACACCTACATTTCCTTTGCAGACAAATTGAAGAACTGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR GCA 90 bp ATCTATATATATATGCTTTTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGAAACCTCCTACAAGCTaGACCTTCATAATGAGAAAC +
Preference number: 4 (lower is better)
Translates to: IYIYMLFPSQSLISDSTSKPPTS*TFIMRN
Trigger: GTTTCTCATTATGAAGGTGCAGCTTGTAGGAGGTTT...CGACGTACTGTCACTGATGAGAGACTGGGAAGGGAAAAGCATATATATATAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp ACCAGTTCTTCAATTTGTCTGCAAAGGAAATGTAGGTGTTCAGATGTCGGTTGTTGTATACGACAGCTTTaGTTACCAGCATATCAGGAT +
Preference number: 4 (lower is better)
Translates to: TSSSICLQRKCRCSDVGCCIRQL*LPAYQD
Trigger: ATCCTGATATGCTGGTAACCAAAGCTGTCGTATACA...ACAACCGACATCTGAACACCTACATTTCCTTTGCAGACAAATTGAAGAACTGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CCA 90 bp ATCTATATATATATGCTTTTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGCTTTGGATATGGAGTTaGTTATTACAATGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: IYIYMLFPSQSLISDSTSLWIWS*LLQWGQ
Trigger: CTGACCCCATTGTAATAACCAACTCCATATCCAAAG...CGACGTACTGTCACTGATGAGAGACTGGGAAGGGAAAAGCATATATATATAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR GCA 90 bp TCTTCAATTTGTCTGCAAAGGAAATGTAGGTGTTCAGATGTCGGTTGTTGCTGTGTTCTTCAATTTGTCTaGAAAGGAAATGTAGGTGTT +
Preference number: 4 (lower is better)
Translates to: SSICLQRKCRCSDVGCCCVLQFV*KGNVGV
Trigger: AACACCTACATTTCCTTTGCAGACAAATTGAAGAAC...ACAGCAACAACCGACATCTGAACACCTACATTTCCTTTGCAGACAAATTGAAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS CCA 90 bp TCAGTCAGGCACCTGGCGGCGGCGGCGCGGCTTCCGGGAGCTGTCTaGCTCGCGGTCCTGGTGTCCGGCGGCTGCCCCGGCGGGCTCCGA +
Preference number: 5 (lower is better)
Translates to: SVRHLAAAARLPGAV*LAVLVSGGCPGGLR
Trigger: TCGGAGCCCGCCGGGGCAGCCGCCGGACACCAGGACCGCGAGCCAGACAGCTCCCGGAAGCCGCGCCGCCGCCGCCAGGTGCCTGACTGA
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
CDS GCA 90 bp CGGCTTCCGGGAGCTGTCTGGCTCGCGGTCCTGGTGTCCGGCGGCTaGCCCGGCGGGCTCCGAGGCGCGCTAGAGCTGCGCAGAAATGCC +
Preference number: 5 (lower is better)
Translates to: RLPGAVWLAVLVSGG*PGGLRGALELRRNA
Trigger: GGCATTTCTGCGCAGCTCTAGCGCGCCTCGGAGCCCGCCGGGGCAGCCGCCGGACACCAGGACCGCGAGCCAGACAGCTCCCGGAAGCCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000406771.6
ENST00000430276.5
CDS GCA 90 bp GGATGGATGCTTCTCATTGGAGTTGGCCTCTGGGTGGCCGTGGCCTaGAGGGGTCACAGGGGTGGTCACAGCGGCAGCAGCCTCGGGCTG +
Preference number: 5 (lower is better)
Translates to: GWMLLIGVGLWVAVA*RGHRGGHSGSSLGL
Trigger: CAGCCCGAGGCTGCTGCCGCTGTGACCACCCCTGTGACCCCTGCAGGCCACGGCCACCCAGAGGCCAACTCCAATGAGAAGCATCCATCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338074.7
ENST00000373941.5
ENST00000373946.7
ENST00000406771.6
ENST00000427533.2
ENST00000447825.5
ENST00000452261.5
ENST00000636016.2
CDS CCA 90 bp CCGCGTGTCCTGCTGGGATGGATGCTTCTCATTGGAGTTGGCCTCTaGGTGGCCGTGGCCTGCAGGGGTCACAGGGGTGGTCACAGCGGC +
Preference number: 5 (lower is better)
Translates to: PRVLLGWMLLIGVGL*VAVACRGHRGGHSG
Trigger: GCCGCTGTGACCACCCCTGTGACCCCTGCAGGCCACGGCCACCCAGAGGCCAACTCCAATGAGAAGCATCCATCCCAGCAGGACACGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338074.7
ENST00000373941.5
ENST00000373946.7
ENST00000406771.6
ENST00000427533.2
ENST00000447825.5
ENST00000452261.5
ENST00000636016.2
CDS CCA 90 bp CAGCAGGCCGCGTGTCCTGCTGGGATGGATGCTTCTCATTGGAGTTaGCCTCTGGGTGGCCGTGGCCTGCAGGGGTCACAGGGGTGGTCA +
Preference number: 5 (lower is better)
Translates to: QQAACPAGMDASHWS*PLGGRGLQGSQGWS
Trigger: TGACCACCCCTGTGACCCCTGCAGGCCACGGCCACCCAGAGGCCAACTCCAATGAGAAGCATCCATCCCAGCAGGACACGCGGCCTGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338074.7
ENST00000373941.5
ENST00000373946.7
ENST00000406771.6
ENST00000427533.2
ENST00000447825.5
ENST00000452261.5
ENST00000636016.2
CDS CCA 90 bp CCACTCACGGGGGTCCCTTCCTCTCGGGCTGCGCTGGCTGTCAGGTaGGGAAACTCTCCTTCCACTCCCCACTGGGCATCTTCCCAGCCT +
Preference number: 5 (lower is better)
Translates to: PLTGVPSSRAALAVR*GNSPSTPHWASSQP
Trigger: AGGCTGGGAAGATGCCCAGTGGGGAGTGGAAGGAGAGTTTCCCCACCTGACAGCCAGCGCAGCCCGAGAGGAAGGGACCCCCGTGAGTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS TCA 90 bp CCTCATCCCGCTTGTCACCGTCAGGCCCTGCATCATGGTTCTCGCTaGCCGAGGCTGGGCGGGAGAACTCTGCTCCATCAAGGCTGCGGG +
Preference number: 5 (lower is better)
Translates to: PHPACHRQALHHGSR*PRLGGRTLLHQGCG
Trigger: CCCGCAGCCTTGATGGAGCAGAGTTCTCCCGCCCAGCCTCGGTCAGCGAGAACCATGATGCAGGGCCTGACGGTGACAAGCGGGATGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373941.5
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000451082.5
ENST00000628415.2
ENST00000636016.2
CDS GCA 90 bp CTCTCTGGTGTCTGCCCTGAGCTCAGAGCCCTCGAGGAGCTTTTCTaGCAATGTGCGGCCGGAAGCCAGGGCAGCCCCTCCTGGGCTTTC +
Preference number: 5 (lower is better)
Translates to: LSGVCPELRALEELF*QCAAGSQGSPSWAF
Trigger: GAAAGCCCAGGAGGGGCTGCCCTGGCTTCCGGCCGCACATTGGCAGAAAAGCTCCTCGAGGGCTCTGAGCTCAGGGCAGACACCAGAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS CCA 90 bp CGTGTCCCTCTCCTGGTCCTGGTCCTCATCGCCTGTGTCACTCTCTaGGGCCCGGGGACGTGGTGGTTTGACTTTCTCCTCGGAGCCCTC +
Preference number: 5 (lower is better)
Translates to: RVPLLVLVLIACVTL*GPGTWWFDFLLGAL
Trigger: GAGGGCTCCGAGGAGAAAGTCAAACCACCACGTCCCCGGGCCCCAGAGAGTGACACAGGCGATGAGGACCAGGACCAGGAGAGGGACACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373941.5
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000479336.1
ENST00000636016.2
CDS CCA 90 bp GAGTCCTCCCTTGTCGGAGGCTGGAGAGAGGACGTCCACCTCTGCTaGCCTGGTCCCTGGAGCAGTGGGTCTCCCACAAGTGTGAGGCTC +
Preference number: 5 (lower is better)
Translates to: ESSLVGGWREDVHLC*PGPWSSGSPTSVRL
Trigger: GAGCCTCACACTTGTGGGAGACCCACTGCTCCAGGGACCAGGCCAGCAGAGGTGGACGTCCTCTCTCCAGCCTCCGACAAGGGAGGACTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS CCA 90 bp GAACGCTCAAAGAAGGGTGCAGGCCGGTCAATGAGGGCGCTGGCCTaGCGAGTCTGTGCCTGGGTCCTCCCACTGTACCGGAACTTGGAG +
Preference number: 5 (lower is better)
Translates to: ERSKKGAGRSMRALA*RVCAWVLPLYRNLE
Trigger: CTCCAAGTTCCGGTACAGTGGGAGGACCCAGGCACAGACTCGCCAGGCCAGCGCCCTCATTGACCGGCCTGCACCCTTCTTTGAGCGTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373941.5
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS GCA 90 bp ATGTCTAGGCTCTGTTCAGCAGGCCGCGTGTCCTGCTGGGATGGATaGTTCTCATTGGAGTTGGCCTCTGGGTGGCCGTGGCCTGCAGGG +
Preference number: 5 (lower is better)
Translates to: MSRLCSAGRVSCWDG*FSLELASGWPWPAG
Trigger: CCCTGCAGGCCACGGCCACCCAGAGGCCAACTCCAATGAGAAGCATCCATCCCAGCAGGACACGCGGCCTGCTGAACAGAGCCTAGACAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338074.7
ENST00000373941.5
ENST00000373946.7
ENST00000406771.6
ENST00000447825.5
ENST00000452261.5
ENST00000636016.2
CDS GCA 90 bp GGGGTCCCTGCTGGACAGGTCTGGCTTCTGTGTCAGGGTCTGCCTTaGTGGAACCTGTTCCGTCAGCTCTCAGAAGCCAGCAGGAGACCC +
Preference number: 5 (lower is better)
Translates to: GVPAGQVWLLCQGLP*WNLFRQLSEASRRP
Trigger: GGGTCTCCTGCTGGCTTCTGAGAGCTGACGGAACAGGTTCCAGCAAGGCAGACCCTGACACAGAAGCCAGACCTGTCCAGCAGGGACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373950.6
CDS CCA 90 bp GACTCGCCATCCTCATCCCGCTTGTCACCGTCAGGCCCTGCATCATaGTTCTCGCTGACCGAGGCTGGGCGGGAGAACTCTGCTCCATCA +
Preference number: 5 (lower is better)
Translates to: DSPSSSRLSPSGPAS*FSLTEAGRENSAPS
Trigger: TGATGGAGCAGAGTTCTCCCGCCCAGCCTCGGTCAGCGAGAACCATGATGCAGGGCCTGACGGTGACAAGCGGGATGAGGATGGCGAGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373941.5
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000451082.5
ENST00000628415.2
ENST00000636016.2
CDS CCA 90 bp GGGGAGGAGGGCAGCCTGCGCTCCCGTTCCCAGTCTCGATCCCGGTaGATGAGTTTGCTGTTGGGCTCCTTCAGGGTCCTTTTGAGCTCA +
Preference number: 5 (lower is better)
Translates to: GEEGSLRSRSQSRSR*MSLLLGSFRVLLSS
Trigger: TGAGCTCAAAAGGACCCTGAAGGAGCCCAACAGCAAACTCATCCACCGGGATCGAGACTGGGAACGGGAGCGCAGGCTGCCCTCCTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373941.5
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000451082.5
ENST00000454226.5
ENST00000628415.2
ENST00000636016.2
CDS GCA 90 bp GGGGGCTGGAGTTGGGCGAAGCCCAGGTCTGAGAGCGTACTCCGCTaGTGCTCTGCTTGTCCCACGGGTGCCTCTGAAGATACGTCATTT +
Preference number: 5 (lower is better)
Translates to: GGWSWAKPRSESVLR*CSACPTGASEDTSF
Trigger: AAATGACGTATCTTCAGAGGCACCCGTGGGACAAGCAGAGCAGCAGCGGAGTACGCTCTCAGACCTGGGCTTCGCCCAACTCCAGCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000479336.1
ENST00000636016.2
CDS CCA 90 bp CCCGATGATCGGAGAAAGAGAACGGATTTCCGTGGCCACCGTCTGTaGGCCTGGGATCATGGCAGCTGCCCCCTTCCCGGACTTGAGACT +
Preference number: 5 (lower is better)
Translates to: PDDRRKRTDFRGHRL*AWDHGSCPLPGLET
Trigger: AGTCTCAAGTCCGGGAAGGGGGCAGCTGCCATGATCCCAGGCCCACAGACGGTGGCCACGGAAATCCGTTCTCTTTCTCCGATCATCGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373941.5
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000451082.5
ENST00000454226.5
ENST00000628415.2
ENST00000636016.2
CDS CCA 90 bp TGCGTGGCTTCTGCCTTCCAGTTTCCCAGGAAGCCTCCCAGTGTATaGGGTCCCTGCTGGACAGGTCTGGCTTCTGTGTCAGGGTCTGCC +
Preference number: 5 (lower is better)
Translates to: CVASAFQFPRKPPSV*GPCWTGLASVSGSA
Trigger: GGCAGACCCTGACACAGAAGCCAGACCTGTCCAGCAGGGACCCCATACACTGGGAGGCTTCCTGGGAAACTGGAAGGCAGAAGCCACGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427533.2
CDS CCA 90 bp AAGCAGCAGCAGAAACCCTCAGGTCTAAGGAATTCAGCGTCGGCCTaGGCTCACCTCCGGGAGGGGCATCCAGGCGCCCTTTTCTCTCCT +
Preference number: 5 (lower is better)
Translates to: KQQQKPSGLRNSASA*AHLREGHPGALFSP
Trigger: AGGAGAGAAAAGGGCGCCTGGATGCCCCTCCCGGAGGTGAGCCCAGGCCGACGCTGAATTCCTTAGACCTGAGGGTTTCTGCTGCTGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS CCA 90 bp GTCACCAGGTCCTCCATGGTTCTTGGGGGTCCCTGCCCCTTCCTTTaGGGAAGTCATGTGGGCTTCGTCCTTGCTCCTGCTGGAAGCAGC +
Preference number: 5 (lower is better)
Translates to: VTRSSMVLGGPCPFL*GSHVGFVLAPAGSS
Trigger: GCTGCTTCCAGCAGGAGCAAGGACGAAGCCCACATGACTTCCCCAAAGGAAGGGGCAGGGACCCCCAAGAACCATGGAGGACCTGGTGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS CCA 90 bp TGTCTAAGAAAGGGCTCCCTGAGCTCCGAAGGCTCCCCTGACCCATaGGAGGTTGGGCTTGGAGAAGCTTCCTCCAGAGCTGCCAGGTCC +
Preference number: 5 (lower is better)
Translates to: CLRKGSLSSEGSPDP*EVGLGEASSRAARS
Trigger: GGACCTGGCAGCTCTGGAGGAAGCTTCTCCAAGCCCAACCTCCCATGGGTCAGGGGAGCCTTCGGAGCTCAGGGAGCCCTTTCTTAGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS-3UTR CAA 90 bp TACGTCGCAGCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCCCATCCTCATCCCGCTaGTCACCGTCAGGCCCTGCA +
Preference number: 5 (lower is better)
Translates to: YVAAGTSVLRRRIQNEGPPSSSR*SPSGPA
Trigger: TGCAGGGCCTGACGGTGACAAGCGGGATGAGGATGG...GGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGCTGCGACGTA
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp TCGCAGCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTCTGGGGGCCCCCTTGTaGAGATCCCGGGAGAACAGC +
Preference number: 5 (lower is better)
Translates to: SQLGRQCCVGESRMKAPSLGAPL*RSRENS
Trigger: GCTGTTCTCCCGGGATCTCAACAAGGGGGCCCCCAG...AGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGCTGCGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CAA 90 bp CCCTGCCCCAAAGCCAGGTGCAAAATCCACAACAAGGATCCTCCCTCTGAGGTGGGTCCTCCATGGTTCTaGGGGGTCCCTGCCCCTTCC +
Preference number: 5 (lower is better)
Translates to: PCPKARCKIHNKDPPSEVGPPWF*GVPAPS
Trigger: GGAAGGGGCAGGGACCCCCAAGAACCATGGAGGACC...CACCTCAGAGGGAGGATCCTTGTTGTGGATTTTGCACCTGGCTTTGGGGCAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS TCA 90 bp ACTTCCAAGCCTGCGGCTGCTCCAGGCTCAGGTACCAAGTCCCGCTaGGAGATGTCCTGGGTCCTCTGGGACTCATTGGCTTTCTCAGGG +
Preference number: 5 (lower is better)
Translates to: TSKPAAAPGSGTKSR*EMSWVLWDSLAFSG
Trigger: CCCTGAGAAAGCCAATGAGTCCCAGAGGACCCAGGACATCTCTCAGCGGGACTTGGTACCTGAGCCTGGAGCAGCCGCAGGCTTGGAAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS GCA 90 bp ACGGATTTCCGTGGCCACCGTCTGTGGGCCTGGGATCATGGCAGCTaGCCCCTTCCCGGACTTGAGACTGTTCTCCTGGGTGTTATCCAT +
Preference number: 5 (lower is better)
Translates to: TDFRGHRLWAWDHGS*PLPGLETVLLGVIH
Trigger: ATGGATAACACCCAGGAGAACAGTCTCAAGTCCGGGAAGGGGGCAGCTGCCATGATCCCAGGCCCACAGACGGTGGCCACGGAAATCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000202028.9
ENST00000441639.5
CDS GCA 90 bp ACGGATTTCCGTGGCCACCGTCTGTGGGCCTGGGATCATGGCAGCTaGCCCCTTCCCGGACTTGAGACTGTTCTCCATGGTGGTCGATAT +
Preference number: 5 (lower is better)
Translates to: TDFRGHRLWAWDHGS*PLPGLETVLHGGRY
Trigger: ATATCGACCACCATGGAGAACAGTCTCAAGTCCGGGAAGGGGGCAGCTGCCATGATCCCAGGCCCACAGACGGTGGCCACGGAAATCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338074.7
ENST00000373941.5
ENST00000373946.7
ENST00000373950.6
ENST00000451082.5
ENST00000454226.5
ENST00000628415.2
ENST00000636016.2
CDS GCA 90 bp GGCTGGAGTTGGGCGAAGCCCAGGTCTGAGAGCGTACTCCGCTGCTaGTCTGCTTGTCCCACGGGTGCCTCTGAAGATACGTCATTTGGA +
Preference number: 5 (lower is better)
Translates to: GWSWAKPRSESVLRC*SACPTGASEDTSFG
Trigger: TCCAAATGACGTATCTTCAGAGGCACCCGTGGGACAAGCAGAGCAGCAGCGGAGTACGCTCTCAGACCTGGGCTTCGCCCAACTCCAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479336.1
ENST00000636016.2
CDS GCA 90 bp CACTCCCCACTGGGCATCTTCCCAGCCTTCAGCAAACGTCTGTCCTaGGGGAGATCCCTTCAGGTCACCAGGTCCTCCATGGTTCTTGGG +
Preference number: 5 (lower is better)
Translates to: HSPLGIFPAFSKRLS*GRSLQVTRSSMVLG
Trigger: CCCAAGAACCATGGAGGACCTGGTGACCTGAAGGGATCTCCCGCAGGACAGACGTTTGCTGAAGGCTGGGAAGATGCCCAGTGGGGAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS CCA 90 bp CCCACTGTACCGGAACTTGGAGCCCATCACCAGGAAGCCCTTGGGTaGGGGCTCAGGGGACACCAGCCGGAAGAATGTATGATGCTCGAT +
Preference number: 5 (lower is better)
Translates to: PTVPELGAHHQEALG*GLRGHQPEECMMLD
Trigger: ATCGAGCATCATACATTCTTCCGGCTGGTGTCCCCTGAGCCCCCACCCAAGGGCTTCCTGGTGATGGGCTCCAAGTTCCGGTACAGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373941.5
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS CCA 90 bp TCCTCCCACTGTACCGGAACTTGGAGCCCATCACCAGGAAGCCCTTaGGTGGGGGCTCAGGGGACACCAGCCGGAAGAATGTATGATGCT +
Preference number: 5 (lower is better)
Translates to: SSHCTGTWSPSPGSP*VGAQGTPAGRMYDA
Trigger: AGCATCATACATTCTTCCGGCTGGTGTCCCCTGAGCCCCCACCCAAGGGCTTCCTGGTGATGGGCTCCAAGTTCCGGTACAGTGGGAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373941.5
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS CCA 90 bp GTAGAGCTGACCGTGATGCTGGAGCACTTGCGCTCAATGGCCAGGTaGTTGTCCTTCAGGAACACCGTGTCCCTCTCCTGGTCCTGGTCC +
Preference number: 5 (lower is better)
Translates to: VELTVMLEHLRSMAR*LSFRNTVSLSWSWS
Trigger: GGACCAGGACCAGGAGAGGGACACGGTGTTCCTGAAGGACAACCACCTGGCCATTGAGCGCAAGTGCTCCAGCATCACGGTCAGCTCTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373941.5
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000479336.1
ENST00000636016.2
CDS CCA 90 bp GATCGGAGAAAGAGAACGGATTTCCGTGGCCACCGTCTGTGGGCCTaGGATCATGGCAGCTGCCCCCTTCCCGGACTTGAGACTGTTCTC +
Preference number: 5 (lower is better)
Translates to: DRRKRTDFRGHRLWA*DHGSCPLPGLETVL
Trigger: GAGAACAGTCTCAAGTCCGGGAAGGGGGCAGCTGCCATGATCCCAGGCCCACAGACGGTGGCCACGGAAATCCGTTCTCTTTCTCCGATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373941.5
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000451082.5
ENST00000454226.5
ENST00000628415.2
ENST00000636016.2
CDS CCA 90 bp TTCTCCTCCATGTCTAGGCTCTGTTCAGCAGGCCGCGTGTCCTGCTaGGATGGATGCTTCTCATTGGAGTTGGCCTCTGGGTGGCCGTGG +
Preference number: 5 (lower is better)
Translates to: FSSMSRLCSAGRVSC*DGCFSLELASGWPW
Trigger: CCACGGCCACCCAGAGGCCAACTCCAATGAGAAGCATCCATCCCAGCAGGACACGCGGCCTGCTGAACAGAGCCTAGACATGGAGGAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338074.7
ENST00000373941.5
ENST00000373946.7
ENST00000406771.6
ENST00000447825.5
ENST00000452261.5
ENST00000636016.2
CDS CCA 90 bp TTCCCAGGAAGCCTCCCAGTGTATGGGGTCCCTGCTGGACAGGTCTaGCTTCTGTGTCAGGGTCTGCCTTGCTGGAACCTGTTCCGTCAG +
Preference number: 5 (lower is better)
Translates to: FPGSLPVYGVPAGQV*LLCQGLPCWNLFRQ
Trigger: CTGACGGAACAGGTTCCAGCAAGGCAGACCCTGACACAGAAGCCAGACCTGTCCAGCAGGGACCCCATACACTGGGAGGCTTCCTGGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427533.2
CDS CCA 90 bp CACTCCCCTCTCTTTGGGTGGGAAGTTGCCTCTGTCTGGTTTGACTaGCTTCCTGACATTCAGAGGGATGGCCCGAGGAAGGGCGCAGGC +
Preference number: 5 (lower is better)
Translates to: HSPLFGWEVASVWFD*LPDIQRDGPRKGAG
Trigger: GCCTGCGCCCTTCCTCGGGCCATCCCTCTGAATGTCAGGAAGCCAGTCAAACCAGACAGAGGCAACTTCCCACCCAAAGAGAGGGGAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS-3UTR CAA 90 bp GCAGCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTAGGCGATTTCTGGGCCTaGCTGGGCGTGGTCCTCTCC +
Preference number: 5 (lower is better)
Translates to: AAGTSVLRRRIQNEGPFLGDFWA*LGVVLS
Trigger: GGAGAGGACCACGCCCAGCAAGGCCCAGAAATCGCC...TAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp TCGCAGCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTCGGGGACGTGGTGGTTaGACTTTCTCCTCGGAGCCC +
Preference number: 5 (lower is better)
Translates to: SQLGRQCCVGESRMKAPSRGRGG*TFSSEP
Trigger: GGGCTCCGAGGAGAAAGTCAAACCACCACGTCCCCG...AGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGCTGCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CAA 90 bp CCGCCCTCAGGGACTTTTTCCACTATGCTACATGGCCTCCTGGGTGGAGAGGTGGTGATGCTGGAGCACTaGCGCTCAATGGCCAGGTGG +
Preference number: 5 (lower is better)
Translates to: PPSGTFSTMLHGLLGGEVVMLEH*RSMARW
Trigger: CCACCTGGCCATTGAGCGCAAGTGCTCCAGCATCAC...CACCTCTCCACCCAGGAGGCCATGTAGCATAGTGGAAAAAGTCCCTGAGGGCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CAA 90 bp TACACTGAACCCGTCAGCCCCTACTGTGAGCCAACCCACACCCAGAGTCCAGGTTGCTTCTCATTGGAGTaGGCCTCTGGGTGGCCGTGG +
Preference number: 5 (lower is better)
Translates to: YTEPVSPYCEPTHTQSPGCFSLE*ASGWPW
Trigger: CCACGGCCACCCAGAGGCCAACTCCAATGAGAAGCA...ACCTGGACTCTGGGTGTGGGTTGGCTCACAGTAGGGGCTGACGGGTTCAGTGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000636016.2
CDS-3UTR CAA 90 bp CCGCCCTCAGGGACTTTTTCCACTATGCTACATGGCCTCCTGGGTGGAGAGGTGCTATGCCCCGATAGGTaGGCGAGAGTGGGGAGATGC +
Preference number: 5 (lower is better)
Translates to: PPSGTFSTMLHGLLGGEVLCPDR*ARVGRC
Trigger: GCATCTCCCCACTCTCGCCAACCTATCGGGGCATAG...CACCTCTCCACCCAGGAGGCCATGTAGCATAGTGGAAAAAGTCCCTGAGGGCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CAA 90 bp AGGTGTATGTCATCACTGACAAGCCAAAGGGACGCATCTAACCTGGGCCGCCTGGGTGACCAGCACGCCTaGAGCTCCGCATCTCCCCAC +
Preference number: 5 (lower is better)
Translates to: RCMSSLTSQRDASNLGRLGDQHA*SSASPH
Trigger: GTGGGGAGATGCGGAGCTCAAGGCGTGCTGGTCACC...CAGGCGGCCCAGGTTAGATGCGTCCCTTTGGCTTGTCAGTGATGACATACACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373946.7
CDS TCA 90 bp AGCTCCGCATCTCCCCACACATTTGCCCAAATGTCAGGGAAAGGCTaGGCAGGCTCCCTCCCGGGAACTCCTAATCCACCTCCTCTGTCC +
Preference number: 5 (lower is better)
Translates to: SSASPHTFAQMSGKG*AGSLPGTPNPPPLS
Trigger: GGACAGAGGAGGTGGATTAGGAGTTCCCGGGAGGGAGCCTGCTCAGCCTTTCCCTGACATTTGGGCAAATGTGTGGGGAGATGCGGAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373946.7
ENST00000452261.5
CDS TCA 90 bp ATGGACATGTCTAAGAAAGGGCTCCCTGAGCTCCGAAGGCTCCCCTaGCCCATGGGAGGTTGGGCTTGGAGAAGCTTCCTCCAGAGCTGC +
Preference number: 5 (lower is better)
Translates to: MDMSKKGLPELRRLP*PMGGWAWRSFLQSC
Trigger: GCAGCTCTGGAGGAAGCTTCTCCAAGCCCAACCTCCCATGGGTCAGGGGAGCCTTCGGAGCTCAGGGAGCCCTTTCTTAGACATGTCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS GCA 90 bp TGTATGGGGTCCCTGCTGGACAGGTCTGGCTTCTGTGTCAGGGTCTaGCTTGCTGGAACCTGTTCCGTCAGCTCTCAGAAGCCAGCAGGA +
Preference number: 5 (lower is better)
Translates to: CMGSLLDRSGFCVRV*LAGTCSVSSQKPAG
Trigger: TCCTGCTGGCTTCTGAGAGCTGACGGAACAGGTTCCAGCAAGGCAGACCCTGACACAGAAGCCAGACCTGTCCAGCAGGGACCCCATACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373950.6
ENST00000427533.2
CDS GCA 90 bp AGATCCCTTCAGGTCACCAGGTCCTCCATGGTTCTTGGGGGTCCCTaGCCCTTCCTTTGGGGAAGTCATGTGGGCTTCGTCCTTGCTCCT +
Preference number: 5 (lower is better)
Translates to: RSLQVTRSSMVLGGP*PFLWGSHVGFVLAP
Trigger: AGGAGCAAGGACGAAGCCCACATGACTTCCCCAAAGGAAGGGGCAGGGACCCCCAAGAACCATGGAGGACCTGGTGACCTGAAGGGATCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS CCA 90 bp CCTCCATGTCTAGGCTCAGTGTATGGGGTCCCTGCTGGACAGGTCTaGCTTCTGTGTCAGGGTCTGCCTTGCTGGAACCTGTTCCGTCAG +
Preference number: 5 (lower is better)
Translates to: PPCLGSVYGVPAGQV*LLCQGLPCWNLFRQ
Trigger: CTGACGGAACAGGTTCCAGCAAGGCAGACCCTGACACAGAAGCCAGACCTGTCCAGCAGGGACCCCATACACTGAGCCTAGACATGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373950.6
CDS CCA 90 bp GCACGCCCTGTCCTCTGTGAGGAGGGTGCTTCTTCAGTTCCTCTGTaGGACTTTCCTCAGCCTTTCCCAGCAAATCTCCACTCACGGGGG +
Preference number: 5 (lower is better)
Translates to: ARPVLCEEGASSVPL*DFPQPFPANLHSRG
Trigger: CCCCCGTGAGTGGAGATTTGCTGGGAAAGGCTGAGGAAAGTCCCACAGAGGAACTGAAGAAGCACCCTCCTCACAGAGGACAGGGCGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS CCA 90 bp GGCCTGCGCTCACCTCCTGTGGCAGGGGACACCACAAACCCTACTTaGTCCTTGGGCTCTGGGCTGGCTTTCGAAAGATGGACATGTCTA +
Preference number: 5 (lower is better)
Translates to: GLRSPPVAGDTTNPT*SLGSGLAFERWTCL
Trigger: TAGACATGTCCATCTTTCGAAAGCCAGCCCAGAGCCCAAGGACCAAGTAGGGTTTGTGGTGTCCCCTGCCACAGGAGGTGAGCGCAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS-3UTR CAA 90 bp TACGTCGCAGCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCCTCCGGATCTGCTTCTaGATCTCCTTGGAGGGGTCC +
Preference number: 5 (lower is better)
Translates to: YVAAGTSVLRRRIQNEGPLRICF*ISLEGS
Trigger: GGACCCCTCCAAGGAGATCAAGAAGCAGATCCGGAG...GGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGCTGCGACGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp CCCAGTCTCTCATCAGTGACAGTACGTCGCAGCTGGGACGTCAGTGTTGCGTCGCCACTGTACCGGAACTaGGAGCCCATCACCAGGAAG +
Preference number: 5 (lower is better)
Translates to: PSLSSVTVRRSWDVSVASPLYRN*EPITRK
Trigger: CTTCCTGGTGATGGGCTCCAAGTTCCGGTACAGTGG...CGACGCAACACTGACGTCCCAGCTGCGACGTACTGTCACTGATGAGAGACTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp CAGAACCAGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCGTTTCTCGGGGACGTGGTGGTTaGACTTTCTCCTCGGAGCCC +
Preference number: 5 (lower is better)
Translates to: QNQGGRDFYNHRGLACVSRGRGG*TFSSEP
Trigger: GGGCTCCGAGGAGAAAGTCAAACCACCACGTCCCCG...AGAAACGCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCTGGTTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CAA 90 bp GCTCGTCTGCTAACTGTAACGTGCAGAACCAGGGCGGGAGGGACTTCTACAATCCGGGGACGTGGTGGTTaGACTTTCTCCTCGGAGCCC +
Preference number: 5 (lower is better)
Translates to: ARLLTVTCRTRAGGTSTIRGRGG*TFSSEP
Trigger: GGGCTCCGAGGAGAAAGTCAAACCACCACGTCCCCG...GATTGTAGAAGTCCCTCCCGCCCTGGTTCTGCACGTTACAGTTAGCAGACGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CAA 90 bp TCGCAGCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTGTGATGCTGGAGCACTaGCGCTCAATGGCCAGGTGG +
Preference number: 5 (lower is better)
Translates to: SQLGRQCCVGESRMKAPSVMLEH*RSMARW
Trigger: CCACCTGGCCATTGAGCGCAAGTGCTCCAGCATCAC...AGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGCTGCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CAA 90 bp GCTCGTCTGCTAACTGTAACGTGCAGAACCAGGGCGGGAGGGACTTCTACAATCGTGTCCGAGTCGCTTTaGTCCCGGTCGAGCTCAGGC +
Preference number: 5 (lower is better)
Translates to: ARLLTVTCRTRAGGTSTIVSESL*SRSSSG
Trigger: GCCTGAGCTCGACCGGGACAAAAGCGACTCGGACAC...GATTGTAGAAGTCCCTCCCGCCCTGGTTCTGCACGTTACAGTTAGCAGACGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CAA 90 bp CAGAACCAGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCGTTTCTGTGTCCGAGTCGCTTTaGTCCCGGTCGAGCTCAGGC +
Preference number: 5 (lower is better)
Translates to: QNQGGRDFYNHRGLACVSVSESL*SRSSSG
Trigger: GCCTGAGCTCGACCGGGACAAAAGCGACTCGGACAC...AGAAACGCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCTGGTTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CAA 90 bp GCAGCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTACCGTCAGTCTCAGCTTaGTCCTGGGACAGGGGAGGG +
Preference number: 5 (lower is better)
Translates to: AAGTSVLRRRIQNEGPFLPSVSA*SWDRGG
Trigger: CCCTCCCCTGTCCCAGGACAAAGCTGAGACTGACGG...TAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS TCA 90 bp CTCCGTGGTGATGGAGGGAGTGGTTGCTATGAACTCCCTCCCCACTaGGGCACTCCCATCAACCTGCTGGGTGTTATCCATAGCGGAGAC +
Preference number: 5 (lower is better)
Translates to: LRGDGGSGCYELPPH*GTPINLLGVIHSGD
Trigger: GTCTCCGCTATGGATAACACCCAGCAGGTTGATGGGAGTGCCTCAGTGGGGAGGGAGTTCATAGCAACCACTCCCTCCATCACCACGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373950.6
ENST00000454226.5
ENST00000628415.2
CDS TCA 90 bp GAGCTGCCAGGTCCTCAGAATGACCAGGGGAGGCTGGCAGGGGAATaGTCACCTCCATGTGAAGAAATGCTGAAGCCTCGCGGTCCTTCA +
Preference number: 5 (lower is better)
Translates to: ELPGPQNDQGRLAGE*SPPCEEMLKPRGPS
Trigger: TGAAGGACCGCGAGGCTTCAGCATTTCTTCACATGGAGGTGATCATTCCCCTGCCAGCCTCCCCTGGTCATTCTGAGGACCTGGCAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS GCA 90 bp AGCCGAGTAAGCAGTGGAACCAGGACTAGAAGTCTGCGTGGCTTCTaGCTTCCAGTTTCCCAGGAAGCCTCCCAGTGTATGGGGTCCCTG +
Preference number: 5 (lower is better)
Translates to: SRVSSGTRTRSLRGF*LPVSQEASQCMGSL
Trigger: CAGGGACCCCATACACTGGGAGGCTTCCTGGGAAACTGGAAGGCAGAAGCCACGCAGACTTCTAGTCCTGGTTCCACTGCTTACTCGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427533.2
CDS GCA 90 bp GGGTCCCTGCCCCTTCCTTTGGGGAAGTCATGTGGGCTTCGTCCTTaGTCCTGCTGGAAGCAGCAGCAGAAACCCTCAGGTCTAAGGAAT +
Preference number: 5 (lower is better)
Translates to: GSLPLPLGKSCGLRP*SCWKQQQKPSGLRN
Trigger: ATTCCTTAGACCTGAGGGTTTCTGCTGCTGCTTCCAGCAGGAGCAAGGACGAAGCCCACATGACTTCCCCAAAGGAAGGGGCAGGGACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS GCA 90 bp TCATCTCCCTTCGCTTCCCTGAAGGGAACCCAAACCCCAGAGGTATaGGCCCCTCAGCTTCTTCAGGGACTACTCTGGGCTTTCTGCTGG +
Preference number: 5 (lower is better)
Translates to: SSPFASLKGTQTPEV*APQLLQGLLWAFCW
Trigger: CCAGCAGAAAGCCCAGAGTAGTCCCTGAAGAAGCTGAGGGGCGCATACCTCTGGGGTTTGGGTTCCCTTCAGGGAAGCGAAGGGAGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS CCA 90 bp AACTCAGCTCTGGCTTCTGCGTGGGCTGGATCCAATAGAAACGACTaGAGTCCTCCCTTGTCGGAGGCTGGAGAGAGGACGTCCACCTCT +
Preference number: 5 (lower is better)
Translates to: NSALASAWAGSNRND*SPPLSEAGERTSTS
Trigger: AGAGGTGGACGTCCTCTCTCCAGCCTCCGACAAGGGAGGACTCCAGTCGTTTCTATTGGATCCAGCCCACGCAGAAGCCAGAGCTGAGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS CCA 90 bp GGTGGGAACCACTCCCCTCTCTTTGGGTGGGAAGTTGCCTCTGTCTaGTTTGACTGGCTTCCTGACATTCAGAGGGATGGCCCGAGGAAG +
Preference number: 5 (lower is better)
Translates to: GGNHSPLFGWEVASV*FDWLPDIQRDGPRK
Trigger: CTTCCTCGGGCCATCCCTCTGAATGTCAGGAAGCCAGTCAAACCAGACAGAGGCAACTTCCCACCCAAAGAGAGGGGAGTGGTTCCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS-3UTR CAA 90 bp TCGTCTGCTAACTGTAACGTGCAGAACCAGGGCGGGAGGGACTTCTACAATCATGGCGATTTCTGGGCCTaGCTGGGCGTGGTCCTCTCC +
Preference number: 5 (lower is better)
Translates to: SSANCNVQNQGGRDFYNHGDFWA*LGVVLS
Trigger: GGAGAGGACCACGCCCAGCAAGGCCCAGAAATCGCC...ATGATTGTAGAAGTCCCTCCCGCCCTGGTTCTGCACGTTACAGTTAGCAGACGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp TACACTGAACCCGTCAGCCCCTACTGTGAGCCAACCCACACCCAGAGTCCAGGTTGCTTCTTGATCTCCTaGGAGGGGTCCAGCCAGTTC +
Preference number: 5 (lower is better)
Translates to: YTEPVSPYCEPTHTQSPGCFLIS*EGSSQF
Trigger: GAACTGGCTGGACCCCTCCAAGGAGATCAAGAAGCA...ACCTGGACTCTGGGTGTGGGTTGGCTCACAGTAGGGGCTGACGGGTTCAGTGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CAA 90 bp TACGTCGCAGCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCATGCCCTCAGAGTCCTaGGCATGGTGCAGGTCTACT +
Preference number: 5 (lower is better)
Translates to: YVAAGTSVLRRRIQNEGPMPSES*AWCRST
Trigger: AGTAGACCTGCACCATGCCAAGGACTCTGAGGGCAT...GGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGCTGCGACGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp CCGCCCTCAGGGACTTTTTCCACTATGCTACATGGCCTCCTGGGTGGAGAGGTGTCAATGGCCAGGTGGTaGTCCTTCAGGAACACCGTG +
Preference number: 5 (lower is better)
Translates to: PPSGTFSTMLHGLLGGEVSMARW*SFRNTV
Trigger: CACGGTGTTCCTGAAGGACAACCACCTGGCCATTGA...CACCTCTCCACCCAGGAGGCCATGTAGCATAGTGGAAAAAGTCCCTGAGGGCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CAA 90 bp TCATCAGTGACAGTACGTCGCAGCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGTGATGCTGGAGCACTaGCGCTCAATGGCCAGGTGG +
Preference number: 5 (lower is better)
Translates to: SSVTVRRSWDVSVASENPVMLEH*RSMARW
Trigger: CCACCTGGCCATTGAGCGCAAGTGCTCCAGCATCAC...TGGATTCTCCGACGCAACACTGACGTCCCAGCTGCGACGTACTGTCACTGATGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CAA 90 bp AACCAGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATCTGGGGGCCCCCTTGTaGAGATCCCGGGAGAACAGC +
Preference number: 5 (lower is better)
Translates to: NQGGRDFYNHRGLACVSYLGAPL*RSRENS
Trigger: GCTGTTCTCCCGGGATCTCAACAAGGGGGCCCCCAG...ATAAGAAACGCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCTGGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CAA 90 bp AACCAGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTGGCTGGGGGCCCCCTaGTTGAGATCCCGGGAGAAC +
Preference number: 5 (lower is better)
Translates to: NQGGRDFYNHRGLACVSYWLGAP*LRSREN
Trigger: GTTCTCCCGGGATCTCAACAAGGGGGCCCCCAGCCA...ATAAGAAACGCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCTGGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CAA 90 bp AAATGTAGGTGTTCAGATGTCGGTTGTTGCTGTCAGCCAACTGCTCTGCCAGCCTGGCTGGGGGCCCCCTaGTTGAGATCCCGGGAGAAC +
Preference number: 5 (lower is better)
Translates to: KCRCSDVGCCCQPTALPAWLGAP*LRSREN
Trigger: GTTCTCCCGGGATCTCAACAAGGGGGCCCCCAGCCA...GGCTGGCAGAGCAGTTGGCTGACAGCAACAACCGACATCTGAACACCTACATTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CAA 90 bp GCAGCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTATGCAGTTTGGCCTCCTaGATGGCCAAAGCCAGGGCC +
Preference number: 5 (lower is better)
Translates to: AAGTSVLRRRIQNEGPFLCSLAS*MAKARA
Trigger: GGCCCTGGCTTTGGCCATCAAGGAGGCCAAACTGCA...TAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp TTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGCAGCTGGGACGTCAGTGTTGCAGTTTGGCCTCCTaGATGGCCAAAGCCAGGGCC +
Preference number: 5 (lower is better)
Translates to: FPSQSLISDSTSQLGRQCCSLAS*MAKARA
Trigger: GGCCCTGGCTTTGGCCATCAAGGAGGCCAAACTGCA...ACACTGACGTCCCAGCTGCGACGTACTGTCACTGATGAGAGACTGGGAAGGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp CCCAGTCTCTCATCAGTGACAGTACGTCGCAGCTGGGACGTCAGTGTTGCGTCGGCTGGGACGTCAGTGTaGCGTCGGAGAATCCAGAAT +
Preference number: 5 (lower is better)
Translates to: PSLSSVTVRRSWDVSVASAGTSV*RRRIQN
Trigger: ATTCTGGATTCTCCGACGCAACACTGACGTCCCAGC...CGACGCAACACTGACGTCCCAGCTGCGACGTACTGTCACTGATGAGAGACTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp CCGCCCTCAGGGACTTTTTCCACTATGCTACATGGCCTCCTGGGTGGAGAGGTGGCTTGCGTTTCTTATTaGGCGGGGGAAAGGGGTGAG +
Preference number: 5 (lower is better)
Translates to: PPSGTFSTMLHGLLGGEVACVSY*AGERGE
Trigger: CTCACCCCTTTCCCCCGCCAAATAAGAAACGCAAGC...CACCTCTCCACCCAGGAGGCCATGTAGCATAGTGGAAAAAGTCCCTGAGGGCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CAA 90 bp GCTCGTCTGCTAACTGTAACGTGCAGAACCAGGGCGGGAGGGACTTCTACAATCGCCCCCTTCCCGGACTaGAGACTGTTCTCCATGGTG +
Preference number: 5 (lower is better)
Translates to: ARLLTVTCRTRAGGTSTIAPFPD*RLFSMV
Trigger: CACCATGGAGAACAGTCTCAAGTCCGGGAAGGGGGC...GATTGTAGAAGTCCCTCCCGCCCTGGTTCTGCACGTTACAGTTAGCAGACGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp GCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTAATGCCGTCAGTCTCAGCTTaGTCCTGGGACAGGGGAGGG +
Preference number: 5 (lower is better)
Translates to: AGTSVLRRRIQNEGPFLMPSVSA*SWDRGG
Trigger: CCCTCCCCTGTCCCAGGACAAAGCTGAGACTGACGG...CATTAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CAA 90 bp CCGCCCTCAGGGACTTTTTCCACTATGCTACATGGCCTCCTGGGTGGAGAGGTGCTCAGAGTTCAGCTGTaGACTGAGAGGGAGGTCTCC +
Preference number: 5 (lower is better)
Translates to: PPSGTFSTMLHGLLGGEVLRVQL*TEREVS
Trigger: GGAGACCTCCCTCTCAGTCAACAGCTGAACTCTGAG...CACCTCTCCACCCAGGAGGCCATGTAGCATAGTGGAAAAAGTCCCTGAGGGCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CAA 90 bp GCTCGTCTGCTAACTGTAACGTGCAGAACCAGGGCGGGAGGGACTTCTACAATCCTATGCCCCGATAGGTaGGCGAGAGTGGGGAGATGC +
Preference number: 5 (lower is better)
Translates to: ARLLTVTCRTRAGGTSTILCPDR*ARVGRC
Trigger: GCATCTCCCCACTCTCGCCAACCTATCGGGGCATAG...GATTGTAGAAGTCCCTCCCGCCCTGGTTCTGCACGTTACAGTTAGCAGACGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CAA 90 bp CCCTGCCCCAAAGCCAGGTGCAAAATCCACAACAAGGATCCTCCCTCTGAGGTGCCACCACTCCAGCTCTaGACCCAGAAAGAGGGGGAA +
Preference number: 5 (lower is better)
Translates to: PCPKARCKIHNKDPPSEVPPLQL*TQKEGE
Trigger: TTCCCCCTCTTTCTGGGTCAAGAGCTGGAGTGGTGG...CACCTCAGAGGGAGGATCCTTGTTGTGGATTTTGCACCTGGCTTTGGGGCAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CAA 90 bp TACGTCGCAGCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCGTTTCACAGCCTGAATaGGGGGACACGGGCTCTAGT +
Preference number: 5 (lower is better)
Translates to: YVAAGTSVLRRRIQNEGPVSQPE*GDTGSS
Trigger: ACTAGAGCCCGTGTCCCCCAATTCAGGCTGTGAAAC...GGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGCTGCGACGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS-3UTR CAA 90 bp TACGTCGCAGCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCACCAGAACGTCTACCTaGGAGAGTCTGCCGTTGGCA +
Preference number: 5 (lower is better)
Translates to: YVAAGTSVLRRRIQNEGPTRTST*ESLPLA
Trigger: TGCCAACGGCAGACTCTCCAAGGTAGACGTTCTGGT...GGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGCTGCGACGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS TCA 90 bp CCCAATGCTCTGAACCCTCAGGAGATGCTGCGAGGCTTTTCTGAGTaGACACTTCCAAGCCTGCGGCTGCTCCAGGCTCAGGTACCAAGT +
Preference number: 5 (lower is better)
Translates to: PNALNPQEMLRGFSE*TLPSLRLLQAQVPS
Trigger: ACTTGGTACCTGAGCCTGGAGCAGCCGCAGGCTTGGAAGTGTTCACTCAGAAAAGCCTCGCAGCATCTCCTGAGGGTTCAGAGCATTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS GCA 90 bp ACCTTGGAGAGTCTGCCGTTGGCAAGGATACCAGCAAGGCCTGCCTaGCTTTCTTCCTGCTGCATGGTGGTCACTTTTAGGAGACCGAGC +
Preference number: 5 (lower is better)
Translates to: TLESLPLARIPARPA*LSSCCMVVTFRRPS
Trigger: GCTCGGTCTCCTAAAAGTGACCACCATGCAGCAGGAAGAAAGGCAGGCAGGCCTTGCTGGTATCCTTGCCAACGGCAGACTCTCCAAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS CCA 90 bp ATTTCTTGGCAATCTTCTGGGGCGATTTCTGGGCCTTGCTGGGCGTaGTCCTCTCCGAAAGGCCATCGGCCTCACTGTAGTCCTTCTCCT +
Preference number: 5 (lower is better)
Translates to: ISWQSSGAISGPCWA*SSPKGHRPHCSPSP
Trigger: AGGAGAAGGACTACAGTGAGGCCGATGGCCTTTCGGAGAGGACCACGCCCAGCAAGGCCCAGAAATCGCCCCAGAAGATTGCCAAGAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373941.5
ENST00000373945.5
ENST00000373946.7
ENST00000373950.6
ENST00000406771.6
ENST00000430276.5
ENST00000432589.5
ENST00000441639.5
ENST00000447825.5
ENST00000452261.5
ENST00000628415.2
ENST00000636016.2
CDS CCA 90 bp CAGATGGCACTCTTGTATTTCTTGGCAATCTTCTGGGGCGATTTCTaGGCCTTGCTGGGCGTGGTCCTCTCCGAAAGGCCATCGGCCTCA +
Preference number: 5 (lower is better)
Translates to: QMALLYFLAIFWGDF*ALLGVVLSERPSAS
Trigger: TGAGGCCGATGGCCTTTCGGAGAGGACCACGCCCAGCAAGGCCCAGAAATCGCCCCAGAAGATTGCCAAGAAATACAAGAGTGCCATCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373941.5
ENST00000373945.5
ENST00000373946.7
ENST00000373950.6
ENST00000406771.6
ENST00000430276.5
ENST00000432589.5
ENST00000441639.5
ENST00000447825.5
ENST00000452261.5
ENST00000628415.2
ENST00000636016.2
CDS CCA 90 bp CCCCTTCCTTTGGGGAAGTCATGTGGGCTTCGTCCTTGCTCCTGCTaGAAGCAGCAGCAGAAACCCTCAGGTCTAAGGAATTCAGCGTCG +
Preference number: 5 (lower is better)
Translates to: PLPLGKSCGLRPCSC*KQQQKPSGLRNSAS
Trigger: CGACGCTGAATTCCTTAGACCTGAGGGTTTCTGCTGCTGCTTCCAGCAGGAGCAAGGACGAAGCCCACATGACTTCCCCAAAGGAAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS-3UTR CAA 90 bp GACTTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGCGATTTCTGGGCCTaGCTGGGCGTGGTCCTCTCC +
Preference number: 5 (lower is better)
Translates to: DFYNHRGLACVSYLAGERGDFWA*LGVVLS
Trigger: GGAGAGGACCACGCCCAGCAAGGCCCAGAAATCGCC...CCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGAAGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp TACACTGAACCCGTCAGCCCCTACTGTGAGCCAACCCACACCCAGAGTCCAGGTTCCTTCTCTAGGAGGTaGAGGTGTTCACAGACCAGG +
Preference number: 5 (lower is better)
Translates to: YTEPVSPYCEPTHTQSPGSFSRR*RCSQTR
Trigger: CCTGGTCTGTGAACACCTCAACCTCCTAGAGAAGGA...ACCTGGACTCTGGGTGTGGGTTGGCTCACAGTAGGGGCTGACGGGTTCAGTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CAA 90 bp TCGCAGCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTGAGATCTTGAGGATCTaGGGCCAGGCAAAGCGGTTG +
Preference number: 5 (lower is better)
Translates to: SQLGRQCCVGESRMKAPSEILRI*GQAKRL
Trigger: CAACCGCTTTGCCTGGCCCAAGATCCTCAAGATCTC...AGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGCTGCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp TTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGCAGCTGGGACGTCAGTGTCCACTGTACCGGAACTaGGAGCCCATCACCAGGAAG +
Preference number: 5 (lower is better)
Translates to: FPSQSLISDSTSQLGRQCPLYRN*EPITRK
Trigger: CTTCCTGGTGATGGGCTCCAAGTTCCGGTACAGTGG...ACACTGACGTCCCAGCTGCGACGTACTGTCACTGATGAGAGACTGGGAAGGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp TCGTCTGCTAACTGTAACGTGCAGAACCAGGGCGGGAGGGACTTCTACAATCATCCATCCTCATCCCGCTaGTCACCGTCAGGCCCTGCA +
Preference number: 5 (lower is better)
Translates to: SSANCNVQNQGGRDFYNHPSSSR*SPSGPA
Trigger: TGCAGGGCCTGACGGTGACAAGCGGGATGAGGATGG...ATGATTGTAGAAGTCCCTCCCGCCCTGGTTCTGCACGTTACAGTTAGCAGACGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp AAATGTAGGTGTTCAGATGTCGGTTGTTGCTGTCAGCCAACTGCTCTGCCAGCCCCATCCTCATCCCGCTaGTCACCGTCAGGCCCTGCA +
Preference number: 5 (lower is better)
Translates to: KCRCSDVGCCCQPTALPAPSSSR*SPSGPA
Trigger: TGCAGGGCCTGACGGTGACAAGCGGGATGAGGATGG...GGCTGGCAGAGCAGTTGGCTGACAGCAACAACCGACATCTGAACACCTACATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp TTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTAATGGTTCTCTGGCTTGGGCCATCCTCATCCCGCTaGTCACCGTCAGGCCCTGCA +
Preference number: 5 (lower is better)
Translates to: LRRRIQNEGPFLMVLWLGPSSSR*SPSGPA
Trigger: TGCAGGGCCTGACGGTGACAAGCGGGATGAGGATGG...CCCAAGCCAGAGAACCATTAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp TACGTCGCAGCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTCCTTCAGGGTCCTTTaGAGCTCATTGATGCTGGCC +
Preference number: 5 (lower is better)
Translates to: YVAAGTSVLRRRIQNEGPSFRVL*SSLMLA
Trigger: GGCCAGCATCAATGAGCTCAAAAGGACCCTGAAGGA...GGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGCTGCGACGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp CCCAGTCTCTCATCAGTGACAGTACGTCGCAGCTGGGACGTCAGTGTTGCGTCGTCCTTCAGGGTCCTTTaGAGCTCATTGATGCTGGCC +
Preference number: 5 (lower is better)
Translates to: PSLSSVTVRRSWDVSVASSFRVL*SSLMLA
Trigger: GGCCAGCATCAATGAGCTCAAAAGGACCCTGAAGGA...CGACGCAACACTGACGTCCCAGCTGCGACGTACTGTCACTGATGAGAGACTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp GCTCGTCTGCTAACTGTAACGTGCAGAACCAGGGCGGGAGGGACTTCTACAATCTCCCGGTGGATGAGTTaGCTGTTGGGCTCCTTCAGG +
Preference number: 5 (lower is better)
Translates to: ARLLTVTCRTRAGGTSTISRWMS*LLGSFR
Trigger: CCTGAAGGAGCCCAACAGCAAACTCATCCACCGGGA...GATTGTAGAAGTCCCTCCCGCCCTGGTTCTGCACGTTACAGTTAGCAGACGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp AGGTGTATGTCATCACTGACAAGCCAAAGGGACGCATCTAACCTGGGCCGCCTGTCCCGGTGGATGAGTTaGCTGTTGGGCTCCTTCAGG +
Preference number: 5 (lower is better)
Translates to: RCMSSLTSQRDASNLGRLSRWMS*LLGSFR
Trigger: CCTGAAGGAGCCCAACAGCAAACTCATCCACCGGGA...CAGGCGGCCCAGGTTAGATGCGTCCCTTTGGCTTGTCAGTGATGACATACACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CAA 90 bp TCGTCTGCTAACTGTAACGTGCAGAACCAGGGCGGGAGGGACTTCTACAATCATCGGGGACGTGGTGGTTaGACTTTCTCCTCGGAGCCC +
Preference number: 5 (lower is better)
Translates to: SSANCNVQNQGGRDFYNHRGRGG*TFSSEP
Trigger: GGGCTCCGAGGAGAAAGTCAAACCACCACGTCCCCG...ATGATTGTAGAAGTCCCTCCCGCCCTGGTTCTGCACGTTACAGTTAGCAGACGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CAA 90 bp CCACCATCTTCTACAATGGCTGAGAGCACCACCTCCCTTTGGATATGGAGTTGGCGGGGACGTGGTGGTTaGACTTTCTCCTCGGAGCCC +
Preference number: 5 (lower is better)
Translates to: PPSSTMAESTTSLWIWSWRGRGG*TFSSEP
Trigger: GGGCTCCGAGGAGAAAGTCAAACCACCACGTCCCCG...CCAACTCCATATCCAAAGGGAGGTGGTGCTCTCAGCCATTGTAGAAGATGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CAA 90 bp ACAAATGGAATTGCTCGTCTGCTAACTGTAACGTGCAGAACCAGGGCGGGAGGGGTGATGCTGGAGCACTaGCGCTCAATGGCCAGGTGG +
Preference number: 5 (lower is better)
Translates to: TNGIARLLTVTCRTRAGGVMLEH*RSMARW
Trigger: CCACCTGGCCATTGAGCGCAAGTGCTCCAGCATCAC...CCCTCCCGCCCTGGTTCTGCACGTTACAGTTAGCAGACGAGCAATTCCATTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CAA 90 bp AATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTGAGCAAGTGTCCGAGTCGCTTTaGTCCCGGTCGAGCTCAGGC +
Preference number: 5 (lower is better)
Translates to: NHRGLACVSYLAGERGEQVSESL*SRSSSG
Trigger: GCCTGAGCTCGACCGGGACAAAAGCGACTCGGACAC...TTGCTCACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CAA 90 bp ACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTAATGGTTCTCCTGGGGGCCCCCTTGTaGAGATCCCGGGAGAACAGC +
Preference number: 5 (lower is better)
Translates to: TSVLRRRIQNEGPFLMVLLGAPL*RSRENS
Trigger: GCTGTTCTCCCGGGATCTCAACAAGGGGGCCCCCAG...GAGAACCATTAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CAA 90 bp GACTTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGTGGCTGGGGGCCCCCTaGTTGAGATCCCGGGAGAAC +
Preference number: 5 (lower is better)
Translates to: DFYNHRGLACVSYLAGERWLGAP*LRSREN
Trigger: GTTCTCCCGGGATCTCAACAAGGGGGCCCCCAGCCA...CCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGAAGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CAA 90 bp CCCAGTCTCTCATCAGTGACAGTACGTCGCAGCTGGGACGTCAGTGTTGCGTCGTCAGGATGCTGCAGTTaGGCCTCCTTGATGGCCAAA +
Preference number: 5 (lower is better)
Translates to: PSLSSVTVRRSWDVSVASSGCCS*ASLMAK
Trigger: TTTGGCCATCAAGGAGGCCAAACTGCAGCATCCTGA...CGACGCAACACTGACGTCCCAGCTGCGACGTACTGTCACTGATGAGAGACTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp TCGCAGCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTGCTGGGACGTCAGTGTaGCGTCGGAGAATCCAGAAT +
Preference number: 5 (lower is better)
Translates to: SQLGRQCCVGESRMKAPSAGTSV*RRRIQN
Trigger: ATTCTGGATTCTCCGACGCAACACTGACGTCCCAGC...AGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGCTGCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp CCCAGTCTCTCATCAGTGACAGTACGTCGCAGCTGGGACGTCAGTGTTGCGTCGGTGTTCAGATGTCGGTaGTTGCTGTCAGCCAACTGC +
Preference number: 5 (lower is better)
Translates to: PSLSSVTVRRSWDVSVASVFRCR*LLSANC
Trigger: GCAGTTGGCTGACAGCAACAACCGACATCTGAACAC...CGACGCAACACTGACGTCCCAGCTGCGACGTACTGTCACTGATGAGAGACTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp CCCAGTCTCTCATCAGTGACAGTACGTCGCAGCTGGGACGTCAGTGTTGCGTCGTCTAAGAACTCCTGCTaGTGTCTCGGCGTGGTTTCC +
Preference number: 5 (lower is better)
Translates to: PSLSSVTVRRSWDVSVASSKNSC*CLGVVS
Trigger: GGAAACCACGCCGAGACACAAGCAGGAGTTCTTAGA...CGACGCAACACTGACGTCCCAGCTGCGACGTACTGTCACTGATGAGAGACTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000636016.2
CDS-3UTR CAA 90 bp ACAAATGGAATTGCTCGTCTGCTAACTGTAACGTGCAGAACCAGGGCGGGAGGGGCCCCCTTCCCGGACTaGAGACTGTTCTCCATGGTG +
Preference number: 5 (lower is better)
Translates to: TNGIARLLTVTCRTRAGGAPFPD*RLFSMV
Trigger: CACCATGGAGAACAGTCTCAAGTCCGGGAAGGGGGC...CCCTCCCGCCCTGGTTCTGCACGTTACAGTTAGCAGACGAGCAATTCCATTTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp CCACCATCTTCTACAATGGCTGAGAGCACCACCTCCCTTTGGATATGGAGTTGGCCGTCAGTCTCAGCTTaGTCCTGGGACAGGGGAGGG +
Preference number: 5 (lower is better)
Translates to: PPSSTMAESTTSLWIWSWPSVSA*SWDRGG
Trigger: CCCTCCCCTGTCCCAGGACAAAGCTGAGACTGACGG...CCAACTCCATATCCAAAGGGAGGTGGTGCTCTCAGCCATTGTAGAAGATGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CAA 90 bp GCTCGTCTGCTAACTGTAACGTGCAGAACCAGGGCGGGAGGGACTTCTACAATCAACCCTACTTGGTCCTaGGGCTCTGGGCTGGCTTTC +
Preference number: 5 (lower is better)
Translates to: ARLLTVTCRTRAGGTSTINPTWS*GSGLAF
Trigger: GAAAGCCAGCCCAGAGCCCAAGGACCAAGTAGGGTT...GATTGTAGAAGTCCCTCCCGCCCTGGTTCTGCACGTTACAGTTAGCAGACGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS TCA 90 bp AATACCCAATGCTCTGAACCCTCAGGAGATGCTGCGAGGCTTTTCTaGGTGAACACTTCCAAGCCTGCGGCTGCTCCAGGCTCAGGTACC +
Preference number: 5 (lower is better)
Translates to: NTQCSEPSGDAARLF*VNTSKPAAAPGSGT
Trigger: GGTACCTGAGCCTGGAGCAGCCGCAGGCTTGGAAGTGTTCACTCAGAAAAGCCTCGCAGCATCTCCTGAGGGTTCAGAGCATTGGGTATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS GCA 90 bp CACTCTTGTATTTCTTGGCAATCTTCTGGGGCGATTTCTGGGCCTTaGTGGGCGTGGTCCTCTCCGAAAGGCCATCGGCCTCACTGTAGT +
Preference number: 5 (lower is better)
Translates to: HSCISWQSSGAISGP*WAWSSPKGHRPHCS
Trigger: ACTACAGTGAGGCCGATGGCCTTTCGGAGAGGACCACGCCCAGCAAGGCCCAGAAATCGCCCCAGAAGATTGCCAAGAAATACAAGAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373941.5
ENST00000373945.5
ENST00000373946.7
ENST00000373950.6
ENST00000406771.6
ENST00000430276.5
ENST00000432589.5
ENST00000441639.5
ENST00000447825.5
ENST00000452261.5
ENST00000628415.2
ENST00000636016.2
CDS CCA 90 bp TCTTGTATTTCTTGGCAATCTTCTGGGGCGATTTCTGGGCCTTGCTaGGCGTGGTCCTCTCCGAAAGGCCATCGGCCTCACTGTAGTCCT +
Preference number: 5 (lower is better)
Translates to: SCISWQSSGAISGPC*AWSSPKGHRPHCSP
Trigger: AGGACTACAGTGAGGCCGATGGCCTTTCGGAGAGGACCACGCCCAGCAAGGCCCAGAAATCGCCCCAGAAGATTGCCAAGAAATACAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373941.5
ENST00000373945.5
ENST00000373946.7
ENST00000373950.6
ENST00000406771.6
ENST00000430276.5
ENST00000432589.5
ENST00000441639.5
ENST00000447825.5
ENST00000452261.5
ENST00000628415.2
ENST00000636016.2
CDS CCA 90 bp ACAAACCCTACTTGGTCCTTGGGCTCTGGGCTGGCTTTCGAAAGATaGACATGTCTAAGAAAGGGCTCCCTGAGCTCCGAAGGCTCCCCT +
Preference number: 5 (lower is better)
Translates to: TNPTWSLGSGLAFER*TCLRKGSLSSEGSP
Trigger: AGGGGAGCCTTCGGAGCTCAGGGAGCCCTTTCTTAGACATGTCCATCTTTCGAAAGCCAGCCCAGAGCCCAAGGACCAAGTAGGGTTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS-3UTR CAA 90 bp GCAGCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTATGCTTCTTGATCTCCTaGGAGGGGTCCAGCCAGTTC +
Preference number: 5 (lower is better)
Translates to: AAGTSVLRRRIQNEGPFLCFLIS*EGSSQF
Trigger: GAACTGGCTGGACCCCTCCAAGGAGATCAAGAAGCA...TAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp CTGCTCTGCCAGCCCCAGCAGCAGTGCAAGGATGCGGTGTTTCCTGTATATATACTCCGGATCTGCTTCTaGATCTCCTTGGAGGGGTCC +
Preference number: 5 (lower is better)
Translates to: LLCQPQQQCKDAVFPVYILRICF*ISLEGS
Trigger: GGACCCCTCCAAGGAGATCAAGAAGCAGATCCGGAG...TATATATACAGGAAACACCGCATCCTTGCACTGCTGCTGGGGCTGGCAGAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp CAGAACCAGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCGTTTCTGAGATCTTGAGGATCTaGGGCCAGGCAAAGCGGTTG +
Preference number: 5 (lower is better)
Translates to: QNQGGRDFYNHRGLACVSEILRI*GQAKRL
Trigger: CAACCGCTTTGCCTGGCCCAAGATCCTCAAGATCTC...AGAAACGCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCTGGTTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp CCTATGAGCAACATCACCCGTCAGTCTCAGCTTTGTCCTGGGACAGGGGAGGGCAATTGTGCTCTCAAATaGCTCATACTCCCCAGGCCG +
Preference number: 5 (lower is better)
Translates to: PMSNITRQSQLCPGTGEGNCALK*LILPRP
Trigger: CGGCCTGGGGAGTATGAGCAATTTGAGAGCACAATT...GCCCTCCCCTGTCCCAGGACAAAGCTGAGACTGACGGGTGATGTTGCTCATAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CAA 90 bp GCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTAATGCCACTGTACCGGAACTaGGAGCCCATCACCAGGAAG +
Preference number: 5 (lower is better)
Translates to: AGTSVLRRRIQNEGPFLMPLYRN*EPITRK
Trigger: CTTCCTGGTGATGGGCTCCAAGTTCCGGTACAGTGG...CATTAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp AACGTGCAGAACCAGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCTGGATGAGTTTGCTGTaGGGCTCCTTCAGGGTCCTT +
Preference number: 5 (lower is better)
Translates to: NVQNQGGRDFYNHRGLACWMSLL*GSFRVL
Trigger: AAGGACCCTGAAGGAGCCCAACAGCAAACTCATCCA...GCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCTGGTTCTGCACGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp TTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGCAGCTGGGACGTCAGTGTTCAATGGCCAGGTGGTaGTCCTTCAGGAACACCGTG +
Preference number: 5 (lower is better)
Translates to: FPSQSLISDSTSQLGRQCSMARW*SFRNTV
Trigger: CACGGTGTTCCTGAAGGACAACCACCTGGCCATTGA...ACACTGACGTCCCAGCTGCGACGTACTGTCACTGATGAGAGACTGGGAAGGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CAA 90 bp ACTCTCAAGAAGGGCAGGAAGAAGGTTCTGTGGCTTTTCCACCAGGATTGTAGATGGCTGGGGGCCCCCTaGTTGAGATCCCGGGAGAAC +
Preference number: 5 (lower is better)
Translates to: TLKKGRKKVLWLFHQDCRWLGAP*LRSREN
Trigger: GTTCTCCCGGGATCTCAACAAGGGGGCCCCCAGCCA...TCTACAATCCTGGTGGAAAAGCCACAGAACCTTCTTCCTGCCCTTCTTGAGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CAA 90 bp CCAGCCCCAGCAGCAGTGCAAGGATGCGGTGTTTCCTGTATATATATCTATATCTGGCTGGGGGCCCCCTaGTTGAGATCCCGGGAGAAC +
Preference number: 5 (lower is better)
Translates to: PAPAAVQGCGVSCIYIYIWLGAP*LRSREN
Trigger: GTTCTCCCGGGATCTCAACAAGGGGGCCCCCAGCCA...GATATAGATATATATACAGGAAACACCGCATCCTTGCACTGCTGCTGGGGCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CAA 90 bp AGGAAATGTAGGTGTTCAGATGTCGGTTGTTGCTGTCAGCCAACTGCTCTGCCAGCCCCCTTCCCGGACTaGAGACTGTTCTCCTGGGTG +
Preference number: 5 (lower is better)
Translates to: RKCRCSDVGCCCQPTALPAPFPD*RLFSWV
Trigger: CACCCAGGAGAACAGTCTCAAGTCCGGGAAGGGGGC...TGGCAGAGCAGTTGGCTGACAGCAACAACCGACATCTGAACACCTACATTTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000202028.9
ENST00000441639.5
CDS-3UTR CAA 90 bp GAAGGCCCCTTCTTAATGGTTCTCTGGCTTGGGTTGGACCAGAAATGCCAGGATTGCAGTTTGGCCTCCTaGATGGCCAAAGCCAGGGCC +
Preference number: 5 (lower is better)
Translates to: EGPFLMVLWLGLDQKCQDCSLAS*MAKARA
Trigger: GGCCCTGGCTTTGGCCATCAAGGAGGCCAAACTGCA...ATCCTGGCATTTCTGGTCCAACCCAAGCCAGAGAACCATTAAGAAGGGGCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp TTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTAATGGTTCTCTGGCTTGGGTGCAGTTTGGCCTCCTaGATGGCCAAAGCCAGGGCC +
Preference number: 5 (lower is better)
Translates to: LRRRIQNEGPFLMVLWLGCSLAS*MAKARA
Trigger: GGCCCTGGCTTTGGCCATCAAGGAGGCCAAACTGCA...CCCAAGCCAGAGAACCATTAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp AATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTGAGCAATGCAGTTTGGCCTCCTaGATGGCCAAAGCCAGGGCC +
Preference number: 5 (lower is better)
Translates to: NHRGLACVSYLAGERGEQCSLAS*MAKARA
Trigger: GGCCCTGGCTTTGGCCATCAAGGAGGCCAAACTGCA...TTGCTCACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp TCGCAGCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTCAGGATGCTGCAGTTaGGCCTCCTTGATGGCCAAA +
Preference number: 5 (lower is better)
Translates to: SQLGRQCCVGESRMKAPSSGCCS*ASLMAK
Trigger: TTTGGCCATCAAGGAGGCCAAACTGCAGCATCCTGA...AGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGCTGCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp TCGCAGCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTGTTCTCTGGCTTGGGTaGGACCAGAAATGCCAGGAT +
Preference number: 5 (lower is better)
Translates to: SQLGRQCCVGESRMKAPSVLWLG*DQKCQD
Trigger: ATCCTGGCATTTCTGGTCCAACCCAAGCCAGAGAAC...AGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGCTGCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp GAAGGCCCCTTCTTAATGGTTCTCTGGCTTGGGTTGGACCAGAAATGCCAGGATTGCTTCTCATTGGAGTaGGCCTCTGGGTGGCCGTGG +
Preference number: 5 (lower is better)
Translates to: EGPFLMVLWLGLDQKCQDCFSLE*ASGWPW
Trigger: CCACGGCCACCCAGAGGCCAACTCCAATGAGAAGCA...ATCCTGGCATTTCTGGTCCAACCCAAGCCAGAGAACCATTAAGAAGGGGCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000636016.2
CDS-3UTR CAA 90 bp TCGCAGCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTCCGGCTTTAGCTCCTaGATCTTGGTTGGAGTCCTG +
Preference number: 5 (lower is better)
Translates to: SQLGRQCCVGESRMKAPSSGFSS*ILVGVL
Trigger: CAGGACTCCAACCAAGATCAAGGAGCTAAAGCCGGA...AGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGCTGCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000636016.2
CDS-3UTR CAA 90 bp AACCAGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATGCCCCCTTCCCGGACTaGAGACTGTTCTCCATGGTG +
Preference number: 5 (lower is better)
Translates to: NQGGRDFYNHRGLACVSYAPFPD*RLFSMV
Trigger: CACCATGGAGAACAGTCTCAAGTCCGGGAAGGGGGC...ATAAGAAACGCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCTGGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp CCAGGATGGTCACCCAGAACTCCTAACCGCCCTCAGGGACTTTTTCCACTATGCCTCAGAGTTCAGCTGTaGACTGAGAGGGAGGTCTCC +
Preference number: 5 (lower is better)
Translates to: PGWSPRTPNRPQGLFPLCLRVQL*TEREVS
Trigger: GGAGACCTCCCTCTCAGTCAACAGCTGAACTCTGAG...GCATAGTGGAAAAAGTCCCTGAGGGCGGTTAGGAGTTCTGGGTGACCATCCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CAA 90 bp CCGCCCTCAGGGACTTTTTCCACTATGCTACATGGCCTCCTGGGTGGAGAGGTGTGTGATGGGAGCTTCTaGAAGGGTTCCTGTGGTCTT +
Preference number: 5 (lower is better)
Translates to: PPSGTFSTMLHGLLGGEVCDGSF*KGSCGL
Trigger: AAGACCACAGGAACCCTTCAAGAAGCTCCCATCACA...CACCTCTCCACCCAGGAGGCCATGTAGCATAGTGGAAAAAGTCCCTGAGGGCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CAA 90 bp GCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTAATGCCACCACTCCAGCTCTaGACCCAGAAAGAGGGGGAA +
Preference number: 5 (lower is better)
Translates to: AGTSVLRRRIQNEGPFLMPPLQL*TQKEGE
Trigger: TTCCCCCTCTTTCTGGGTCAAGAGCTGGAGTGGTGG...CATTAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CAA 90 bp CTGCCAGCCCCAGCAGCAGTGCAAGGATGCGGTGTTTCCTGTATATATATCTATGACTGGAGTCCTCCCTaGTCGGAGGCTGGAGAGAGG +
Preference number: 5 (lower is better)
Translates to: LPAPAAVQGCGVSCIYIYDWSPP*SEAGER
Trigger: CCTCTCTCCAGCCTCCGACAAGGGAGGACTCCAGTC...ATAGATATATATACAGGAAACACCGCATCCTTGCACTGCTGCTGGGGCTGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS-3UTR CAA 90 bp AAGACTGAAAACCAAGGCAAGCCCCGTAGGGAGATAAGGACTAAGCCAGGGACCTCCCTGCCCCTTCCTTaGGGGAAGTCATGTGGGCTT +
Preference number: 5 (lower is better)
Translates to: KTENQGKPRREIRTKPGTSLPLP*GKSCGL
Trigger: AAGCCCACATGACTTCCCCAAAGGAAGGGGCAGGGA...GGTCCCTGGCTTAGTCCTTATCTCCCTACGGGGCTTGCCTTGGTTTTCAGTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS GCA 90 bp CTCCCATCAACCTGCTGGGTGTTATCCATAGCGGAGACTCTGGTCTaGAGTACGGCCTCCGGCTCAATCTTCTTTCTAATGGCCAGACTG +
Preference number: 5 (lower is better)
Translates to: LPSTCWVLSIAETLV*STASGSIFFLMARL
Trigger: CAGTCTGGCCATTAGAAAGAAGATTGAGCCGGAGGCCGTACTGCAGACCAGAGTCTCCGCTATGGATAACACCCAGCAGGTTGATGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373950.6
ENST00000454226.5
ENST00000628415.2
CDS GCA 90 bp GCACTCCCATCAACCTGGGTGTTATCCATAGCGGAGACTCTGGTCTaGAGTACGGCCTCCGGCTCAATCTTCTTTCTAATGGCCAGACTG +
Preference number: 5 (lower is better)
Translates to: ALPSTWVLSIAETLV*STASGSIFFLMARL
Trigger: CAGTCTGGCCATTAGAAAGAAGATTGAGCCGGAGGCCGTACTGCAGACCAGAGTCTCCGCTATGGATAACACCCAGGTTGATGGGAGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373941.5
ENST00000373946.7
ENST00000451082.5
ENST00000636016.2
CDS-3UTR CAA 90 bp CATCTTCTACAATGGCTGAGAGCACCACCTCCCTTTGGATATGGAGTTGGTTATGGCGATTTCTGGGCCTaGCTGGGCGTGGTCCTCTCC +
Preference number: 5 (lower is better)
Translates to: HLLQWLRAPPPFGYGVGYGDFWA*LGVVLS
Trigger: GGAGAGGACCACGCCCAGCAAGGCCCAGAAATCGCC...ATAACCAACTCCATATCCAAAGGGAGGTGGTGCTCTCAGCCATTGTAGAAGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CAA 90 bp TCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTGCTCCGGATCTGCTTCTaGATCTCCTTGGAGGGGTCC +
Preference number: 5 (lower is better)
Translates to: STIIVVWLAFLIWRGKGVLRICF*ISLEGS
Trigger: GGACCCCTCCAAGGAGATCAAGAAGCAGATCCGGAG...CACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp GCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTAATGATGCCCTCAGAGTCCTaGGCATGGTGCAGGTCTACT +
Preference number: 5 (lower is better)
Translates to: AGTSVLRRRIQNEGPFLMMPSES*AWCRST
Trigger: AGTAGACCTGCACCATGCCAAGGACTCTGAGGGCAT...CATTAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp GCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTAATGGAGATCTTGAGGATCTaGGGCCAGGCAAAGCGGTTG +
Preference number: 5 (lower is better)
Translates to: AGTSVLRRRIQNEGPFLMEILRI*GQAKRL
Trigger: CAACCGCTTTGCCTGGCCCAAGATCCTCAAGATCTC...CATTAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp AACCAGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATCCACTGTACCGGAACTaGGAGCCCATCACCAGGAAG +
Preference number: 5 (lower is better)
Translates to: NQGGRDFYNHRGLACVSYPLYRN*EPITRK
Trigger: CTTCCTGGTGATGGGCTCCAAGTTCCGGTACAGTGG...ATAAGAAACGCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCTGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp TCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTGCCACTGTACCGGAACTaGGAGCCCATCACCAGGAAG +
Preference number: 5 (lower is better)
Translates to: STIIVVWLAFLIWRGKGVPLYRN*EPITRK
Trigger: CTTCCTGGTGATGGGCTCCAAGTTCCGGTACAGTGG...CACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp TTAATGGTTCTCTGGCTTGGGTTGGACCAGAAATGCCAGGATCTCTTCACAGAGCCATCCTCATCCCGCTaGTCACCGTCAGGCCCTGCA +
Preference number: 5 (lower is better)
Translates to: LMVLWLGLDQKCQDLFTEPSSSR*SPSGPA
Trigger: TGCAGGGCCTGACGGTGACAAGCGGGATGAGGATGG...CTCTGTGAAGAGATCCTGGCATTTCTGGTCCAACCCAAGCCAGAGAACCATTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp TCATCAGTGACAGTACGTCGCAGCTGGGACGTCAGTGTTGCGTCGGAGAATCCATGGATGAGTTTGCTGTaGGGCTCCTTCAGGGTCCTT +
Preference number: 5 (lower is better)
Translates to: SSVTVRRSWDVSVASENPWMSLL*GSFRVL
Trigger: AAGGACCCTGAAGGAGCCCAACAGCAAACTCATCCA...TGGATTCTCCGACGCAACACTGACGTCCCAGCTGCGACGTACTGTCACTGATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp TTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTAATGGTTCTCTGGCTTGGGTCCCGGTGGATGAGTTaGCTGTTGGGCTCCTTCAGG +
Preference number: 5 (lower is better)
Translates to: LRRRIQNEGPFLMVLWLGSRWMS*LLGSFR
Trigger: CCTGAAGGAGCCCAACAGCAAACTCATCCACCGGGA...CCCAAGCCAGAGAACCATTAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp AAATGTAGGTGTTCAGATGTCGGTTGTTGCTGTCAGCCAACTGCTCTGCCAGCCTCCCGGTGGATGAGTTaGCTGTTGGGCTCCTTCAGG +
Preference number: 5 (lower is better)
Translates to: KCRCSDVGCCCQPTALPASRWMS*LLGSFR
Trigger: CCTGAAGGAGCCCAACAGCAAACTCATCCACCGGGA...GGCTGGCAGAGCAGTTGGCTGACAGCAACAACCGACATCTGAACACCTACATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp GAAGGCCCCTTCTTAATGGTTCTCTGGCTTGGGTTGGACCAGAAATGCCAGGATTCCCGGTGGATGAGTTaGCTGTTGGGCTCCTTCAGG +
Preference number: 5 (lower is better)
Translates to: EGPFLMVLWLGLDQKCQDSRWMS*LLGSFR
Trigger: CCTGAAGGAGCCCAACAGCAAACTCATCCACCGGGA...ATCCTGGCATTTCTGGTCCAACCCAAGCCAGAGAACCATTAAGAAGGGGCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp AGGAAATGTAGGTGTTCAGATGTCGGTTGTTGCTGTCAGCCAACTGCTCTGCCAAGCCCTGCTCTCTCATaGGCTTTCTCAGGGGTGCCC +
Preference number: 5 (lower is better)
Translates to: RKCRCSDVGCCCQPTALPSPALS*AFSGVP
Trigger: GGGCACCCCTGAGAAAGCCAATGAGAGAGCAGGGCT...TGGCAGAGCAGTTGGCTGACAGCAACAACCGACATCTGAACACCTACATTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
CDS-3UTR CAA 90 bp CTGCTCTGCCAGCCCCAGCAGCAGTGCAAGGATGCGGTGTTTCCTGTATATATATCAATGGCCAGGTGGTaGTCCTTCAGGAACACCGTG +
Preference number: 5 (lower is better)
Translates to: LLCQPQQQCKDAVFPVYISMARW*SFRNTV
Trigger: CACGGTGTTCCTGAAGGACAACCACCTGGCCATTGA...TATATATACAGGAAACACCGCATCCTTGCACTGCTGCTGGGGCTGGCAGAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CAA 90 bp CCAGCCCCAGCAGCAGTGCAAGGATGCGGTGTTTCCTGTATATATATCTATATCGTGTCCGAGTCGCTTTaGTCCCGGTCGAGCTCAGGC +
Preference number: 5 (lower is better)
Translates to: PAPAAVQGCGVSCIYIYIVSESL*SRSSSG
Trigger: GCCTGAGCTCGACCGGGACAAAAGCGACTCGGACAC...GATATAGATATATATACAGGAAACACCGCATCCTTGCACTGCTGCTGGGGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CAA 90 bp CATCTTCTACAATGGCTGAGAGCACCACCTCCCTTTGGATATGGAGTTGGTTATTGGCTGGGGGCCCCCTaGTTGAGATCCCGGGAGAAC +
Preference number: 5 (lower is better)
Translates to: HLLQWLRAPPPFGYGVGYWLGAP*LRSREN
Trigger: GTTCTCCCGGGATCTCAACAAGGGGGCCCCCAGCCA...ATAACCAACTCCATATCCAAAGGGAGGTGGTGCTCTCAGCCATTGTAGAAGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CAA 90 bp TCATCAGTGACAGTACGTCGCAGCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGTTCTCTGGCTTGGGTaGGACCAGAAATGCCAGGAT +
Preference number: 5 (lower is better)
Translates to: SSVTVRRSWDVSVASENPVLWLG*DQKCQD
Trigger: ATCCTGGCATTTCTGGTCCAACCCAAGCCAGAGAAC...TGGATTCTCCGACGCAACACTGACGTCCCAGCTGCGACGTACTGTCACTGATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp GCTCGTCTGCTAACTGTAACGTGCAGAACCAGGGCGGGAGGGACTTCTACAATCTCATCGTGGTCTGGCTaGCGTTTCTTATTTGGCGGG +
Preference number: 5 (lower is better)
Translates to: ARLLTVTCRTRAGGTSTISSWSG*RFLFGG
Trigger: CCCGCCAAATAAGAAACGCAAGCCAGACCACGATGA...GATTGTAGAAGTCCCTCCCGCCCTGGTTCTGCACGTTACAGTTAGCAGACGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp GCTCGTCTGCTAACTGTAACGTGCAGAACCAGGGCGGGAGGGACTTCTACAATCTCCGGCTTTAGCTCCTaGATCTTGGTTGGAGTCCTG +
Preference number: 5 (lower is better)
Translates to: ARLLTVTCRTRAGGTSTISGFSS*ILVGVL
Trigger: CAGGACTCCAACCAAGATCAAGGAGCTAAAGCCGGA...GATTGTAGAAGTCCCTCCCGCCCTGGTTCTGCACGTTACAGTTAGCAGACGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000636016.2
CDS-3UTR CAA 90 bp CTCCCCTCCCACCTTCTTCAGCCTGAGAATAGTCCCTGGCACAAGCAGGTAATCTCCGGCTTTAGCTCCTaGATCTTGGTTGGAGTCCTG +
Preference number: 5 (lower is better)
Translates to: LPSHLLQPENSPWHKQVISGFSS*ILVGVL
Trigger: CAGGACTCCAACCAAGATCAAGGAGCTAAAGCCGGA...GATTACCTGCTTGTGCCAGGGACTATTCTCAGGCTGAAGAAGGTGGGAGGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000636016.2
CDS-3UTR CAA 90 bp GACTTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGCCCCCTTCCCGGACTaGAGACTGTTCTCCATGGTG +
Preference number: 5 (lower is better)
Translates to: DFYNHRGLACVSYLAGERAPFPD*RLFSMV
Trigger: CACCATGGAGAACAGTCTCAAGTCCGGGAAGGGGGC...CCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGAAGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp CCCTGCCCCAAAGCCAGGTGCAAAATCCACAACAAGGATCCTCCCTCTGAGGTGTGTGTTGCTTCTTTCTaGCCAAACCCACACCTCTCC +
Preference number: 5 (lower is better)
Translates to: PCPKARCKIHNKDPPSEVCVASF*PNPHLS
Trigger: GGAGAGGTGTGGGTTTGGCAAGAAAGAAGCAACACA...CACCTCAGAGGGAGGATCCTTGTTGTGGATTTTGCACCTGGCTTTGGGGCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CAA 90 bp GCAGCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTACAGGGAGAAGGTGTCTaGAACTGGCATTTTGGGGAC +
Preference number: 5 (lower is better)
Translates to: AAGTSVLRRRIQNEGPFLQGEGV*NWHFGD
Trigger: GTCCCCAAAATGCCAGTTCAAGACACCTTCTCCCTG...TAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CAA 90 bp GCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTAATGCTCAGAGTTCAGCTGTaGACTGAGAGGGAGGTCTCC +
Preference number: 5 (lower is better)
Translates to: AGTSVLRRRIQNEGPFLMLRVQL*TEREVS
Trigger: GGAGACCTCCCTCTCAGTCAACAGCTGAACTCTGAG...CATTAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CAA 90 bp AGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCCACCACTCCAGCTCTaGACCCAGAAAGAGGGGGAA +
Preference number: 5 (lower is better)
Translates to: RAGGTSTIIVVWLAFLIWPPLQL*TQKEGE
Trigger: TTCCCCCTCTTTCTGGGTCAAGAGCTGGAGTGGTGG...CCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CAA 90 bp CCCAGTCTCTCATCAGTGACAGTACGTCGCAGCTGGGACGTCAGTGTTGCGTCGAGTTTCAGGCCAGTCTaGGAATGTGCTTGCAGGATT +
Preference number: 5 (lower is better)
Translates to: PSLSSVTVRRSWDVSVASSFRPV*ECACRI
Trigger: AATCCTGCAAGCACATTCCAAGACTGGCCTGAAACT...CGACGCAACACTGACGTCCCAGCTGCGACGTACTGTCACTGATGAGAGACTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CAA 90 bp CTGCTCTGCCAGCCCCAGCAGCAGTGCAAGGATGCGGTGTTTCCTGTATATATAGTGTTGGCTGCTAAGTaGGTGGAGCGCTTCTCTTCC +
Preference number: 5 (lower is better)
Translates to: LLCQPQQQCKDAVFPVYIVLAAK*VERFSS
Trigger: GGAAGAGAAGCGCTCCACCAACTTAGCAGCCAACAC...TATATATACAGGAAACACCGCATCCTTGCACTGCTGCTGGGGCTGGCAGAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS CCA 90 bp TTGTTGGCCACTGAGGTCTTGCTAATATCTTCTAGGGAGCCCTCTTaGTCCCCAGCCTGGAAAGAGGTCATCTCCCTTCGCTTCCCTGAA +
Preference number: 5 (lower is better)
Translates to: LLATEVLLISSREPS*SPAWKEVISLRFPE
Trigger: TTCAGGGAAGCGAAGGGAGATGACCTCTTTCCAGGCTGGGGACCAAGAGGGCTCCCTAGAAGATATTAGCAAGACCTCAGTGGCCAACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS-3UTR CAA 90 bp AACGTGCAGAACCAGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCGCACTCTTGTATTTCTaGGCAATCTTCTGGGGCGAT +
Preference number: 5 (lower is better)
Translates to: NVQNQGGRDFYNHRGLACALLYF*AIFWGD
Trigger: ATCGCCCCAGAAGATTGCCAAGAAATACAAGAGTGC...GCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCTGGTTCTGCACGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp AACGTGCAGAACCAGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCCGGCAGATGGCACTCTaGTATTTCTTGGCAATCTTC +
Preference number: 5 (lower is better)
Translates to: NVQNQGGRDFYNHRGLACRQMAL*YFLAIF
Trigger: GAAGATTGCCAAGAAATACAAGAGTGCCATCTGCCG...GCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCTGGTTCTGCACGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp AATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTGAGCAAATGCCCTCAGAGTCCTaGGCATGGTGCAGGTCTACT +
Preference number: 5 (lower is better)
Translates to: NHRGLACVSYLAGERGEQMPSES*AWCRST
Trigger: AGTAGACCTGCACCATGCCAAGGACTCTGAGGGCAT...TTGCTCACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp AAATGTAGGTGTTCAGATGTCGGTTGTTGCTGTCAGCCAACTGCTCTGCCAGCCATGCCCTCAGAGTCCTaGGCATGGTGCAGGTCTACT +
Preference number: 5 (lower is better)
Translates to: KCRCSDVGCCCQPTALPAMPSES*AWCRST
Trigger: AGTAGACCTGCACCATGCCAAGGACTCTGAGGGCAT...GGCTGGCAGAGCAGTTGGCTGACAGCAACAACCGACATCTGAACACCTACATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp CCACCATCTTCTACAATGGCTGAGAGCACCACCTCCCTTTGGATATGGAGTTGGGAGATCTTGAGGATCTaGGGCCAGGCAAAGCGGTTG +
Preference number: 5 (lower is better)
Translates to: PPSSTMAESTTSLWIWSWEILRI*GQAKRL
Trigger: CAACCGCTTTGCCTGGCCCAAGATCCTCAAGATCTC...CCAACTCCATATCCAAAGGGAGGTGGTGCTCTCAGCCATTGTAGAAGATGGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CAA 90 bp TCGTCTGCTAACTGTAACGTGCAGAACCAGGGCGGGAGGGACTTCTACAATCATGAGATCTTGAGGATCTaGGGCCAGGCAAAGCGGTTG +
Preference number: 5 (lower is better)
Translates to: SSANCNVQNQGGRDFYNHEILRI*GQAKRL
Trigger: CAACCGCTTTGCCTGGCCCAAGATCCTCAAGATCTC...ATGATTGTAGAAGTCCCTCCCGCCCTGGTTCTGCACGTTACAGTTAGCAGACGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp GCTCGTCTGCTAACTGTAACGTGCAGAACCAGGGCGGGAGGGACTTCTACAATCAATTGTGCTCTCAAATaGCTCATACTCCCCAGGCCG +
Preference number: 5 (lower is better)
Translates to: ARLLTVTCRTRAGGTSTINCALK*LILPRP
Trigger: CGGCCTGGGGAGTATGAGCAATTTGAGAGCACAATT...GATTGTAGAAGTCCCTCCCGCCCTGGTTCTGCACGTTACAGTTAGCAGACGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp TCATCAGTGACAGTACGTCGCAGCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGACATGGTGTACCGTTaGCTGGAAGAACGCTCAAAG +
Preference number: 5 (lower is better)
Translates to: SSVTVRRSWDVSVASENPDMVYR*LEERSK
Trigger: CTTTGAGCGTTCTTCCAGCAAACGGTACACCATGTC...TGGATTCTCCGACGCAACACTGACGTCCCAGCTGCGACGTACTGTCACTGATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp CCCTGCCCCAAAGCCAGGTGCAAAATCCACAACAAGGATCCTCCCTCTGAGGTGTTTAGCTCCTTGATCTaGGTTGGAGTCCTGACCTCT +
Preference number: 5 (lower is better)
Translates to: PCPKARCKIHNKDPPSEVFSSLI*VGVLTS
Trigger: AGAGGTCAGGACTCCAACCAAGATCAAGGAGCTAAA...CACCTCAGAGGGAGGATCCTTGTTGTGGATTTTGCACCTGGCTTTGGGGCAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CAA 90 bp TCGCAGCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTTTAGCTCCTTGATCTaGGTTGGAGTCCTGACCTCT +
Preference number: 5 (lower is better)
Translates to: SQLGRQCCVGESRMKAPSFSSLI*VGVLTS
Trigger: AGAGGTCAGGACTCCAACCAAGATCAAGGAGCTAAA...AGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGCTGCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp GAGGCGGGAGAGAGGAAGGTAGGTTTTGCAGCCCAGTGTCAAGATCCAGAAAGTTGGATGAGTTTGCTGTaGGGCTCCTTCAGGGTCCTT +
Preference number: 5 (lower is better)
Translates to: EAGERKVGFAAQCQDPESWMSLL*GSFRVL
Trigger: AAGGACCCTGAAGGAGCCCAACAGCAAACTCATCCA...ACTTTCTGGATCTTGACACTGGGCTGCAAAACCTACCTTCCTCTCTCCCGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp CCAGCCCCAGCAGCAGTGCAAGGATGCGGTGTTTCCTGTATATATATCTATATCAGCCCTGCTCTCTCATaGGCTTTCTCAGGGGTGCCC +
Preference number: 5 (lower is better)
Translates to: PAPAAVQGCGVSCIYIYISPALS*AFSGVP
Trigger: GGGCACCCCTGAGAAAGCCAATGAGAGAGCAGGGCT...GATATAGATATATATACAGGAAACACCGCATCCTTGCACTGCTGCTGGGGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
CDS-3UTR CAA 90 bp TCCCACCTTCTTCAGCCTGAGAATAGTCCCTGGCACAAGCAGGTAATCAGTAAAAGCCCTGCTCTCTCATaGGCTTTCTCAGGGGTGCCC +
Preference number: 5 (lower is better)
Translates to: SHLLQPENSPWHKQVISKSPALS*AFSGVP
Trigger: GGGCACCCCTGAGAAAGCCAATGAGAGAGCAGGGCT...TTTACTGATTACCTGCTTGTGCCAGGGACTATTCTCAGGCTGAAGAAGGTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
CDS-3UTR CAA 90 bp GAAGGCCCCTTCTTAATGGTTCTCTGGCTTGGGTTGGACCAGAAATGCCAGGATTCAATGGCCAGGTGGTaGTCCTTCAGGAACACCGTG +
Preference number: 5 (lower is better)
Translates to: EGPFLMVLWLGLDQKCQDSMARW*SFRNTV
Trigger: CACGGTGTTCCTGAAGGACAACCACCTGGCCATTGA...ATCCTGGCATTTCTGGTCCAACCCAAGCCAGAGAACCATTAAGAAGGGGCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CAA 90 bp TCGCAGCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTTCGCTTCTCGATCCTaGTCTCAGAAAACCCTCCTT +
Preference number: 5 (lower is better)
Translates to: SQLGRQCCVGESRMKAPSFASRS*SQKTLL
Trigger: AAGGAGGGTTTTCTGAGACAAGGATCGAGAAGCGAA...AGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGCTGCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp CCCAGTCTCTCATCAGTGACAGTACGTCGCAGCTGGGACGTCAGTGTTGCGTCGCTGTATACGACAGCTTaGGTTACCAGCATATCAGGA +
Preference number: 5 (lower is better)
Translates to: PSLSSVTVRRSWDVSVASLYTTA*VTSISG
Trigger: TCCTGATATGCTGGTAACCAAAGCTGTCGTATACAG...CGACGCAACACTGACGTCCCAGCTGCGACGTACTGTCACTGATGAGAGACTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp TTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGCAGCTGGGACGTCAGTGTTTCAGATGTCGGTTGTaGCTGTCAGCCAACTGCTCT +
Preference number: 5 (lower is better)
Translates to: FPSQSLISDSTSQLGRQCFRCRL*LSANCS
Trigger: AGAGCAGTTGGCTGACAGCAACAACCGACATCTGAA...ACACTGACGTCCCAGCTGCGACGTACTGTCACTGATGAGAGACTGGGAAGGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp TCATCAGTGACAGTACGTCGCAGCTGGGACGTCAGTGTTGCGTCGGAGAATCCATTCAGATGTCGGTTGTaGCTGTCAGCCAACTGCTCT +
Preference number: 5 (lower is better)
Translates to: SSVTVRRSWDVSVASENPFRCRL*LSANCS
Trigger: AGAGCAGTTGGCTGACAGCAACAACCGACATCTGAA...TGGATTCTCCGACGCAACACTGACGTCCCAGCTGCGACGTACTGTCACTGATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp GCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTAATGGTGTTCAGATGTCGGTaGTTGCTGTCAGCCAACTGC +
Preference number: 5 (lower is better)
Translates to: AGTSVLRRRIQNEGPFLMVFRCR*LLSANC
Trigger: GCAGTTGGCTGACAGCAACAACCGACATCTGAACAC...CATTAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp TTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTAATGGTTCTCTGGCTTGGGGCTTGCGTTTCTTATTaGGCGGGGGAAAGGGGTGAG +
Preference number: 5 (lower is better)
Translates to: LRRRIQNEGPFLMVLWLGACVSY*AGERGE
Trigger: CTCACCCCTTTCCCCCGCCAAATAAGAAACGCAAGC...CCCAAGCCAGAGAACCATTAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp TCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTGGCTTGCGTTTCTTATTaGGCGGGGGAAAGGGGTGAG +
Preference number: 5 (lower is better)
Translates to: STIIVVWLAFLIWRGKGVACVSY*AGERGE
Trigger: CTCACCCCTTTCCCCCGCCAAATAAGAAACGCAAGC...CACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp CCCTGCCCCAAAGCCAGGTGCAAAATCCACAACAAGGATCCTCCCTCTGAGGTGTTTCTCGGAAAATGGTaGACTGTGCGTGTCTTGCTG +
Preference number: 5 (lower is better)
Translates to: PCPKARCKIHNKDPPSEVFLGKW*TVRVLL
Trigger: CAGCAAGACACGCACAGTCAACCATTTTCCGAGAAA...CACCTCAGAGGGAGGATCCTTGTTGTGGATTTTGCACCTGGCTTTGGGGCAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CAA 90 bp ACTCTCAAGAAGGGCAGGAAGAAGGTTCTGTGGCTTTTCCACCAGGATTGTAGATGCTTCTCATTGGAGTaGGCCTCTGGGTGGCCGTGG +
Preference number: 5 (lower is better)
Translates to: TLKKGRKKVLWLFHQDCRCFSLE*ASGWPW
Trigger: CCACGGCCACCCAGAGGCCAACTCCAATGAGAAGCA...TCTACAATCCTGGTGGAAAAGCCACAGAACCTTCTTCCTGCCCTTCTTGAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000636016.2
CDS-3UTR CAA 90 bp CCAGGATGGTCACCCAGAACTCCTAACCGCCCTCAGGGACTTTTTCCACTATGCTGTGTTGCTTCTTTCTaGCCAAACCCACACCTCTCC +
Preference number: 5 (lower is better)
Translates to: PGWSPRTPNRPQGLFPLCCVASF*PNPHLS
Trigger: GGAGAGGTGTGGGTTTGGCAAGAAAGAAGCAACACA...GCATAGTGGAAAAAGTCCCTGAGGGCGGTTAGGAGTTCTGGGTGACCATCCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CAA 90 bp AACGTGCAGAACCAGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCGAGCACCACCTCCCTTaGGATATGGAGTTGGTTATT +
Preference number: 5 (lower is better)
Translates to: NVQNQGGRDFYNHRGLACEHHLP*DMELVI
Trigger: AATAACCAACTCCATATCCAAAGGGAGGTGGTGCTC...GCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCTGGTTCTGCACGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CAA 90 bp CCTATGAGCAACATCACCCGTCAGTCTCAGCTTTGTCCTGGGACAGGGGAGGGCTTTGCAAATGCAGTTTaGATCTTTCAGGGTCTGCCC +
Preference number: 5 (lower is better)
Translates to: PMSNITRQSQLCPGTGEGFANAV*IFQGLP
Trigger: GGGCAGACCCTGAAAGATCAAAACTGCATTTGCAAA...GCCCTCCCCTGTCCCAGGACAAAGCTGAGACTGACGGGTGATGTTGCTCATAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CAA 90 bp CCACCATCTTCTACAATGGCTGAGAGCACCACCTCCCTTTGGATATGGAGTTGGCTCAGAGTTCAGCTGTaGACTGAGAGGGAGGTCTCC +
Preference number: 5 (lower is better)
Translates to: PPSSTMAESTTSLWIWSWLRVQL*TEREVS
Trigger: GGAGACCTCCCTCTCAGTCAACAGCTGAACTCTGAG...CCAACTCCATATCCAAAGGGAGGTGGTGCTCTCAGCCATTGTAGAAGATGGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CAA 90 bp CCAGCCCCAGCAGCAGTGCAAGGATGCGGTGTTTCCTGTATATATATCTATATCCTATGCCCCGATAGGTaGGCGAGAGTGGGGAGATGC +
Preference number: 5 (lower is better)
Translates to: PAPAAVQGCGVSCIYIYILCPDR*ARVGRC
Trigger: GCATCTCCCCACTCTCGCCAACCTATCGGGGCATAG...GATATAGATATATATACAGGAAACACCGCATCCTTGCACTGCTGCTGGGGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CAA 90 bp ACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTAATGGTTCTCGTTTTCACGGGCTCATaGGCTTTCTCAGGGGTGCCC +
Preference number: 5 (lower is better)
Translates to: TSVLRRRIQNEGPFLMVLVFTGS*AFSGVP
Trigger: GGGCACCCCTGAGAAAGCCAATGAGCCCGTGAAAAC...GAGAACCATTAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000628415.2
CDS-3UTR CAA 90 bp TTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTGTGGAATGTGTGGCTTaGGGGCTGGCAAAGTCCCCT +
Preference number: 5 (lower is better)
Translates to: FYNHRGLACVSYLAGERGVECVA*GLAKSP
Trigger: AGGGGACTTTGCCAGCCCCAAAGCCACACATTCCAC...ACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS GCA 90 bp TTGAGACTGTTCTCCTGGGTGTTATCCATAGCGGAGACTCTGGTCTaGAGTACGGCCTCCGGCTCAATCTTCTTTCTAATGGCCAGACTG +
Preference number: 5 (lower is better)
Translates to: LRLFSWVLSIAETLV*STASGSIFFLMARL
Trigger: CAGTCTGGCCATTAGAAAGAAGATTGAGCCGGAGGCCGTACTGCAGACCAGAGTCTCCGCTATGGATAACACCCAGGAGAACAGTCTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202028.9
ENST00000441639.5
CDS CCA 90 bp CTGTTGGGCTCCTTCAGGGTCCTTTTGAGCTCATTGATGCTGGCCTaGTGCTTCAGCAAGACATCTTCTGGCTTGTCTAAGAACTCCTGC +
Preference number: 5 (lower is better)
Translates to: LLGSFRVLLSSLMLA*CFSKTSSGLSKNSC
Trigger: GCAGGAGTTCTTAGACAAGCCAGAAGATGTCTTGCTGAAGCACCAGGCCAGCATCAATGAGCTCAAAAGGACCCTGAAGGAGCCCAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373941.5
ENST00000373946.7
ENST00000636016.2
CDS-3UTR CAA 90 bp GCAGCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTAGCACTCTTGTATTTCTaGGCAATCTTCTGGGGCGAT +
Preference number: 5 (lower is better)
Translates to: AAGTSVLRRRIQNEGPFLALLYF*AIFWGD
Trigger: ATCGCCCCAGAAGATTGCCAAGAAATACAAGAGTGC...TAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp TTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGCAGCTGGGACGTCAGTGTCGGCAGATGGCACTCTaGTATTTCTTGGCAATCTTC +
Preference number: 5 (lower is better)
Translates to: FPSQSLISDSTSQLGRQCRQMAL*YFLAIF
Trigger: GAAGATTGCCAAGAAATACAAGAGTGCCATCTGCCG...ACACTGACGTCCCAGCTGCGACGTACTGTCACTGATGAGAGACTGGGAAGGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp TTAATGGTTCTCTGGCTTGGGTTGGACCAGAAATGCCAGGATCTCTTCACAGAGCTCCGGATCTGCTTCTaGATCTCCTTGGAGGGGTCC +
Preference number: 5 (lower is better)
Translates to: LMVLWLGLDQKCQDLFTELRICF*ISLEGS
Trigger: GGACCCCTCCAAGGAGATCAAGAAGCAGATCCGGAG...CTCTGTGAAGAGATCCTGGCATTTCTGGTCCAACCCAAGCCAGAGAACCATTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp CCAGCCCCAGCAGCAGTGCAAGGATGCGGTGTTTCCTGTATATATATCTATATCCTCCGGATCTGCTTCTaGATCTCCTTGGAGGGGTCC +
Preference number: 5 (lower is better)
Translates to: PAPAAVQGCGVSCIYIYILRICF*ISLEGS
Trigger: GGACCCCTCCAAGGAGATCAAGAAGCAGATCCGGAG...GATATAGATATATATACAGGAAACACCGCATCCTTGCACTGCTGCTGGGGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp GGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTGAGCAAGGGATTATAGTCCTTTTGAGCTCATaGATGCTGGCCTGGTGCTTC +
Preference number: 5 (lower is better)
Translates to: GLACVSYLAGERGEQGIIVLLSS*MLAWCF
Trigger: GAAGCACCAGGCCAGCATCAATGAGCTCAAAAGGAC...TATAATCCCTTGCTCACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp AAATGTAGGTGTTCAGATGTCGGTTGTTGCTGTCAGCCAACTGCTCTGCCAGCCGTCCTTTTGAGCTCATaGATGCTGGCCTGGTGCTTC +
Preference number: 5 (lower is better)
Translates to: KCRCSDVGCCCQPTALPAVLLSS*MLAWCF
Trigger: GAAGCACCAGGCCAGCATCAATGAGCTCAAAAGGAC...GGCTGGCAGAGCAGTTGGCTGACAGCAACAACCGACATCTGAACACCTACATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp TCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTGTCCTTCAGGGTCCTTTaGAGCTCATTGATGCTGGCC +
Preference number: 5 (lower is better)
Translates to: STIIVVWLAFLIWRGKGVSFRVL*SSLMLA
Trigger: GGCCAGCATCAATGAGCTCAAAAGGACCCTGAAGGA...CACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp CCACCATCTTCTACAATGGCTGAGAGCACCACCTCCCTTTGGATATGGAGTTGGTCCTTCAGGGTCCTTTaGAGCTCATTGATGCTGGCC +
Preference number: 5 (lower is better)
Translates to: PPSSTMAESTTSLWIWSWSFRVL*SSLMLA
Trigger: GGCCAGCATCAATGAGCTCAAAAGGACCCTGAAGGA...CCAACTCCATATCCAAAGGGAGGTGGTGCTCTCAGCCATTGTAGAAGATGGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CAA 90 bp AATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTGAGCAATGGATGAGTTTGCTGTaGGGCTCCTTCAGGGTCCTT +
Preference number: 5 (lower is better)
Translates to: NHRGLACVSYLAGERGEQWMSLL*GSFRVL
Trigger: AAGGACCCTGAAGGAGCCCAACAGCAAACTCATCCA...TTGCTCACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp GAAGGCCCCTTCTTAATGGTTCTCTGGCTTGGGTTGGACCAGAAATGCCAGGATTGGATGAGTTTGCTGTaGGGCTCCTTCAGGGTCCTT +
Preference number: 5 (lower is better)
Translates to: EGPFLMVLWLGLDQKCQDWMSLL*GSFRVL
Trigger: AAGGACCCTGAAGGAGCCCAACAGCAAACTCATCCA...ATCCTGGCATTTCTGGTCCAACCCAAGCCAGAGAACCATTAAGAAGGGGCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp CATCTTCTACAATGGCTGAGAGCACCACCTCCCTTTGGATATGGAGTTGGTTATAGCCCTGCTCTCTCATaGGCTTTCTCAGGGGTGCCC +
Preference number: 5 (lower is better)
Translates to: HLLQWLRAPPPFGYGVGYSPALS*AFSGVP
Trigger: GGGCACCCCTGAGAAAGCCAATGAGAGAGCAGGGCT...ATAACCAACTCCATATCCAAAGGGAGGTGGTGCTCTCAGCCATTGTAGAAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
CDS-3UTR CAA 90 bp GCCAGTTCAGTGAGATCTAGGAACCTCAGGATACATCAATCACAGTCAGATAATCTGGGGGCCCCCTTGTaGAGATCCCGGGAGAACAGC +
Preference number: 5 (lower is better)
Translates to: ASSVRSRNLRIHQSQSDNLGAPL*RSRENS
Trigger: GCTGTTCTCCCGGGATCTCAACAAGGGGGCCCCCAG...ATTATCTGACTGTGATTGATGTATCCTGAGGTTCCTAGATCTCACTGAACTGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CAA 90 bp GTTTTCCTTTGCATTCAAGTGGGCCTTAGAGATGCTGGAGAAGAACAAATGGAACTGGGGGCCCCCTTGTaGAGATCCCGGGAGAACAGC +
Preference number: 5 (lower is better)
Translates to: VFLCIQVGLRDAGEEQMELGAPL*RSRENS
Trigger: GCTGTTCTCCCGGGATCTCAACAAGGGGGCCCCCAG...TTCCATTTGTTCTTCTCCAGCATCTCTAAGGCCCACTTGAATGCAAAGGAAAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CAA 90 bp AGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCCTCCTTTCACAGTTTaGGTGACATGGGTGGTGGTG +
Preference number: 5 (lower is better)
Translates to: RAGGTSTIIVVWLAFLIWPPFTV*VTWVVV
Trigger: CACCACCACCCATGTCACCAAAACTGTGAAAGGAGG...CCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp TCGTCTGCTAACTGTAACGTGCAGAACCAGGGCGGGAGGGACTTCTACAATCATCCTCCTTTCACAGTTTaGGTGACATGGGTGGTGGTG +
Preference number: 5 (lower is better)
Translates to: SSANCNVQNQGGRDFYNHPPFTV*VTWVVV
Trigger: CACCACCACCCATGTCACCAAAACTGTGAAAGGAGG...ATGATTGTAGAAGTCCCTCCCGCCCTGGTTCTGCACGTTACAGTTAGCAGACGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp GAAGGCCCCTTCTTAATGGTTCTCTGGCTTGGGTTGGACCAGAAATGCCAGGATCCTCCTTTCACAGTTTaGGTGACATGGGTGGTGGTG +
Preference number: 5 (lower is better)
Translates to: EGPFLMVLWLGLDQKCQDPPFTV*VTWVVV
Trigger: CACCACCACCCATGTCACCAAAACTGTGAAAGGAGG...ATCCTGGCATTTCTGGTCCAACCCAAGCCAGAGAACCATTAAGAAGGGGCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp GCTCGTCTGCTAACTGTAACGTGCAGAACCAGGGCGGGAGGGACTTCTACAATCTTCGCTTCTCGATCCTaGTCTCAGAAAACCCTCCTT +
Preference number: 5 (lower is better)
Translates to: ARLLTVTCRTRAGGTSTIFASRS*SQKTLL
Trigger: AAGGAGGGTTTTCTGAGACAAGGATCGAGAAGCGAA...GATTGTAGAAGTCCCTCCCGCCCTGGTTCTGCACGTTACAGTTAGCAGACGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp TTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTAATGGTTCTCTGGCTTGGGGTTCTCTGGCTTGGGTaGGACCAGAAATGCCAGGAT +
Preference number: 5 (lower is better)
Translates to: LRRRIQNEGPFLMVLWLGVLWLG*DQKCQD
Trigger: ATCCTGGCATTTCTGGTCCAACCCAAGCCAGAGAAC...CCCAAGCCAGAGAACCATTAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp AGGAAATGTAGGTGTTCAGATGTCGGTTGTTGCTGTCAGCCAACTGCTCTGCCAGCTGGGACGTCAGTGTaGCGTCGGAGAATCCAGAAT +
Preference number: 5 (lower is better)
Translates to: RKCRCSDVGCCCQPTALPAGTSV*RRRIQN
Trigger: ATTCTGGATTCTCCGACGCAACACTGACGTCCCAGC...TGGCAGAGCAGTTGGCTGACAGCAACAACCGACATCTGAACACCTACATTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp AATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTGAGCAAGTGTTCAGATGTCGGTaGTTGCTGTCAGCCAACTGC +
Preference number: 5 (lower is better)
Translates to: NHRGLACVSYLAGERGEQVFRCR*LLSANC
Trigger: GCAGTTGGCTGACAGCAACAACCGACATCTGAACAC...TTGCTCACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp CCACCATCTTCTACAATGGCTGAGAGCACCACCTCCCTTTGGATATGGAGTTGGGTGTTCAGATGTCGGTaGTTGCTGTCAGCCAACTGC +
Preference number: 5 (lower is better)
Translates to: PPSSTMAESTTSLWIWSWVFRCR*LLSANC
Trigger: GCAGTTGGCTGACAGCAACAACCGACATCTGAACAC...CCAACTCCATATCCAAAGGGAGGTGGTGCTCTCAGCCATTGTAGAAGATGGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CAA 90 bp TTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTAATGGTTCTCTGGCTTGGGGTGTTCAGATGTCGGTaGTTGCTGTCAGCCAACTGC +
Preference number: 5 (lower is better)
Translates to: LRRRIQNEGPFLMVLWLGVFRCR*LLSANC
Trigger: GCAGTTGGCTGACAGCAACAACCGACATCTGAACAC...CCCAAGCCAGAGAACCATTAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp AGGAAATGTAGGTGTTCAGATGTCGGTTGTTGCTGTCAGCCAACTGCTCTGCCAGCTTGCGTTTCTTATTaGGCGGGGGAAAGGGGTGAG +
Preference number: 5 (lower is better)
Translates to: RKCRCSDVGCCCQPTALPACVSY*AGERGE
Trigger: CTCACCCCTTTCCCCCGCCAAATAAGAAACGCAAGC...TGGCAGAGCAGTTGGCTGACAGCAACAACCGACATCTGAACACCTACATTTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp CTGCCAGCCCCAGCAGCAGTGCAAGGATGCGGTGTTTCCTGTATATATATCTATGCTTGCGTTTCTTATTaGGCGGGGGAAAGGGGTGAG +
Preference number: 5 (lower is better)
Translates to: LPAPAAVQGCGVSCIYIYACVSY*AGERGE
Trigger: CTCACCCCTTTCCCCCGCCAAATAAGAAACGCAAGC...ATAGATATATATACAGGAAACACCGCATCCTTGCACTGCTGCTGGGGCTGGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp GACTTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGCTTGCGTTTCTTATTaGGCGGGGGAAAGGGGTGAG +
Preference number: 5 (lower is better)
Translates to: DFYNHRGLACVSYLAGERACVSY*AGERGE
Trigger: CTCACCCCTTTCCCCCGCCAAATAAGAAACGCAAGC...CCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGAAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp AACCAGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTCATCGTGGTCTGGCTaGCGTTTCTTATTTGGCGGG +
Preference number: 5 (lower is better)
Translates to: NQGGRDFYNHRGLACVSYSSWSG*RFLFGG
Trigger: CCCGCCAAATAAGAAACGCAAGCCAGACCACGATGA...ATAAGAAACGCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCTGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp GAAGGCCCCTTCTTAATGGTTCTCTGGCTTGGGTTGGACCAGAAATGCCAGGATTCATCGTGGTCTGGCTaGCGTTTCTTATTTGGCGGG +
Preference number: 5 (lower is better)
Translates to: EGPFLMVLWLGLDQKCQDSSWSG*RFLFGG
Trigger: CCCGCCAAATAAGAAACGCAAGCCAGACCACGATGA...ATCCTGGCATTTCTGGTCCAACCCAAGCCAGAGAACCATTAAGAAGGGGCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp TCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTGTCATCGTGGTCTGGCTaGCGTTTCTTATTTGGCGGG +
Preference number: 5 (lower is better)
Translates to: STIIVVWLAFLIWRGKGVSSWSG*RFLFGG
Trigger: CCCGCCAAATAAGAAACGCAAGCCAGACCACGATGA...CACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp TTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTAATGGTTCTCTGGCTTGGGTCATCGTGGTCTGGCTaGCGTTTCTTATTTGGCGGG +
Preference number: 5 (lower is better)
Translates to: LRRRIQNEGPFLMVLWLGSSWSG*RFLFGG
Trigger: CCCGCCAAATAAGAAACGCAAGCCAGACCACGATGA...CCCAAGCCAGAGAACCATTAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp CCAGGATGGTCACCCAGAACTCCTAACCGCCCTCAGGGACTTTTTCCACTATGCTTTCTCGGAAAATGGTaGACTGTGCGTGTCTTGCTG +
Preference number: 5 (lower is better)
Translates to: PGWSPRTPNRPQGLFPLCFLGKW*TVRVLL
Trigger: CAGCAAGACACGCACAGTCAACCATTTTCCGAGAAA...GCATAGTGGAAAAAGTCCCTGAGGGCGGTTAGGAGTTCTGGGTGACCATCCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CAA 90 bp AGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGTCTAAGAACTCCTGCTaGTGTCTCGGCGTGGTTTCC +
Preference number: 5 (lower is better)
Translates to: RAGGTSTIIVVWLAFLIWSKNSC*CLGVVS
Trigger: GGAAACCACGCCGAGACACAAGCAGGAGTTCTTAGA...CCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000636016.2
CDS-3UTR CAA 90 bp TTCAGTGTGCTCAGGACTCCTGGTTCCTGCAAAGATGAGTTCCTAGACCGAAGTGCTCAGAGAAGTAGCTaGTGGCAGACAAGCCTGAGG +
Preference number: 5 (lower is better)
Translates to: FSVLRTPGSCKDEFLDRSAQRSS*WQTSLR
Trigger: CCTCAGGCTTGTCTGCCACAAGCTACTTCTCTGAGC...ACTTCGGTCTAGGAACTCATCTTTGCAGGAACCAGGAGTCCTGAGCACACTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CAA 90 bp GAAGGTGTCTTGAACTGGCATTTTGGGGACGACATCTGTGTTGCTTCTTTCTTGCTATGCCCCGATAGGTaGGCGAGAGTGGGGAGATGC +
Preference number: 5 (lower is better)
Translates to: EGVLNWHFGDDICVASFLLCPDR*ARVGRC
Trigger: GCATCTCCCCACTCTCGCCAACCTATCGGGGCATAG...CAAGAAAGAAGCAACACAGATGTCGTCCCCAAAATGCCAGTTCAAGACACCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CAA 90 bp AACGTGCAGAACCAGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCTTATTTCGAGTGATGTaGCTCATGCAGTTTCAGGCC +
Preference number: 5 (lower is better)
Translates to: NVQNQGGRDFYNHRGLACLFRVM*LMQFQA
Trigger: GGCCTGAAACTGCATGAGCAACATCACTCGAAATAA...GCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCTGGTTCTGCACGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CAA 90 bp TCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTGGTGGCCACTTCCACTTaGAACTTGTCCACCAGAACG +
Preference number: 5 (lower is better)
Translates to: STIIVVWLAFLIWRGKGVVATST*NLSTRT
Trigger: CGTTCTGGTGGACAAGTTCAAAGTGGAAGTGGCCAC...CACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS GCA 90 bp TCTGTTTCTCTGTATACGACAGCTTTGGTTACCAGCATATCAGGATaGTGCAGTTTGGCCTCCTTGATGGCCAAAGCCAGGGCCTGGTCT +
Preference number: 5 (lower is better)
Translates to: SVSLYTTALVTSISG*CSLASLMAKARAWS
Trigger: AGACCAGGCCCTGGCTTTGGCCATCAAGGAGGCCAAACTGCAGCATCCTGATATGCTGGTAACCAAAGCTGTCGTATACAGAGAAACAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373941.5
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS GCA 90 bp GAAGGCCCCTTCTTAATGGTTCTCTGGCTTGGGTTGGACCAGAAATaGCAGGATCTCTTCACAGAGGTCAGGATTCCTGTGGCTTCTTGT +
Preference number: 5 (lower is better)
Translates to: EGPFLMVLWLGLDQK*QDLFTEVRIPVASC
Trigger: ACAAGAAGCCACAGGAATCCTGACCTCTGTGAAGAGATCCTGGCATTTCTGGTCCAACCCAAGCCAGAGAACCATTAAGAAGGGGCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS CCA 90 bp TCTTCACAGAGGTCAGGATTCCTGTGGCTTCTTGTCCCTCTCCTCTaGGGATGGGTCTGTTTCTCTGTATACGACAGCTTTGGTTACCAG +
Preference number: 5 (lower is better)
Translates to: SSQRSGFLWLLVPLL*GWVCFSVYDSFGYQ
Trigger: CTGGTAACCAAAGCTGTCGTATACAGAGAAACAGACCCATCCCCAGAGGAGAGGGACAAGAAGCCACAGGAATCCTGACCTCTGTGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS CCA 90 bp TTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTAATGGTTCTCTaGCTTGGGTTGGACCAGAAATGCCAGGATCTCTTCACAGAGGTC +
Preference number: 5 (lower is better)
Translates to: LRRRIQNEGPFLMVL*LGLDQKCQDLFTEV
Trigger: GACCTCTGTGAAGAGATCCTGGCATTTCTGGTCCAACCCAAGCCAGAGAACCATTAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS CCA 90 bp AGGGACCTTGCTTCACCCTCACTCATTCGGCGAGTTTCAGCTCCGTaGGTCTCAAATATCCGAATTTTGTTGGCCACTGAGGTCTTGCTA +
Preference number: 5 (lower is better)
Translates to: RDLASPSLIRRVSAP*VSNIRILLATEVLL
Trigger: TAGCAAGACCTCAGTGGCCAACAAAATTCGGATATTTGAGACCCACGGAGCTGAAACTCGCCGAATGAGTGAGGGTGAAGCAAGGTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS-3UTR CAA 90 bp ATCTATATATATATGCTTTTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGGGCGATTTCTGGGCCTaGCTGGGCGTGGTCCTCTCC +
Preference number: 5 (lower is better)
Translates to: IYIYMLFPSQSLISDSTSGDFWA*LGVVLS
Trigger: GGAGAGGACCACGCCCAGCAAGGCCCAGAAATCGCC...CGACGTACTGTCACTGATGAGAGACTGGGAAGGGAAAAGCATATATATATAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp ACAAATGGAATTGCTCGTCTGCTAACTGTAACGTGCAGAACCAGGGCGGGAGGGCGGCAGATGGCACTCTaGTATTTCTTGGCAATCTTC +
Preference number: 5 (lower is better)
Translates to: TNGIARLLTVTCRTRAGGRQMAL*YFLAIF
Trigger: GAAGATTGCCAAGAAATACAAGAGTGCCATCTGCCG...CCCTCCCGCCCTGGTTCTGCACGTTACAGTTAGCAGACGAGCAATTCCATTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp GACTTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGTCCTTCTCTAGGAGGTaGAGGTGTTCACAGACCAGG +
Preference number: 5 (lower is better)
Translates to: DFYNHRGLACVSYLAGERSFSRR*RCSQTR
Trigger: CCTGGTCTGTGAACACCTCAACCTCCTAGAGAAGGA...CCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGAAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp CCAGCCCCAGCAGCAGTGCAAGGATGCGGTGTTTCCTGTATATATATCTATATCTGCTTCTTGATCTCCTaGGAGGGGTCCAGCCAGTTC +
Preference number: 5 (lower is better)
Translates to: PAPAAVQGCGVSCIYIYICFLIS*EGSSQF
Trigger: GAACTGGCTGGACCCCTCCAAGGAGATCAAGAAGCA...GATATAGATATATATACAGGAAACACCGCATCCTTGCACTGCTGCTGGGGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp ACTCTCAAGAAGGGCAGGAAGAAGGTTCTGTGGCTTTTCCACCAGGATTGTAGAATGCCCTCAGAGTCCTaGGCATGGTGCAGGTCTACT +
Preference number: 5 (lower is better)
Translates to: TLKKGRKKVLWLFHQDCRMPSES*AWCRST
Trigger: AGTAGACCTGCACCATGCCAAGGACTCTGAGGGCAT...TCTACAATCCTGGTGGAAAAGCCACAGAACCTTCTTCCTGCCCTTCTTGAGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CAA 90 bp TTAATGGTTCTCTGGCTTGGGTTGGACCAGAAATGCCAGGATCTCTTCACAGAGGAGATCTTGAGGATCTaGGGCCAGGCAAAGCGGTTG +
Preference number: 5 (lower is better)
Translates to: LMVLWLGLDQKCQDLFTEEILRI*GQAKRL
Trigger: CAACCGCTTTGCCTGGCCCAAGATCCTCAAGATCTC...CTCTGTGAAGAGATCCTGGCATTTCTGGTCCAACCCAAGCCAGAGAACCATTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp AAATGTAGGTGTTCAGATGTCGGTTGTTGCTGTCAGCCAACTGCTCTGCCAGCCAATTGTGCTCTCAAATaGCTCATACTCCCCAGGCCG +
Preference number: 5 (lower is better)
Translates to: KCRCSDVGCCCQPTALPANCALK*LILPRP
Trigger: CGGCCTGGGGAGTATGAGCAATTTGAGAGCACAATT...GGCTGGCAGAGCAGTTGGCTGACAGCAACAACCGACATCTGAACACCTACATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp AATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTGAGCAAAATTGTGCTCTCAAATaGCTCATACTCCCCAGGCCG +
Preference number: 5 (lower is better)
Translates to: NHRGLACVSYLAGERGEQNCALK*LILPRP
Trigger: CGGCCTGGGGAGTATGAGCAATTTGAGAGCACAATT...TTGCTCACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp TTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTAATGGTTCTCTGGCTTGGGAATTGTGCTCTCAAATaGCTCATACTCCCCAGGCCG +
Preference number: 5 (lower is better)
Translates to: LRRRIQNEGPFLMVLWLGNCALK*LILPRP
Trigger: CGGCCTGGGGAGTATGAGCAATTTGAGAGCACAATT...CCCAAGCCAGAGAACCATTAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp GAAGGCCCCTTCTTAATGGTTCTCTGGCTTGGGTTGGACCAGAAATGCCAGGATAATTGTGCTCTCAAATaGCTCATACTCCCCAGGCCG +
Preference number: 5 (lower is better)
Translates to: EGPFLMVLWLGLDQKCQDNCALK*LILPRP
Trigger: CGGCCTGGGGAGTATGAGCAATTTGAGAGCACAATT...ATCCTGGCATTTCTGGTCCAACCCAAGCCAGAGAACCATTAAGAAGGGGCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp GCATTCAAGTGGGCCTTAGAGATGCTGGAGAAGAACAAATGGAATTGCTCGTCTCCACTGTACCGGAACTaGGAGCCCATCACCAGGAAG +
Preference number: 5 (lower is better)
Translates to: AFKWALEMLEKNKWNCSSPLYRN*EPITRK
Trigger: CTTCCTGGTGATGGGCTCCAAGTTCCGGTACAGTGG...AGACGAGCAATTCCATTTGTTCTTCTCCAGCATCTCTAAGGCCCACTTGAATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp AGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGGACATGGTGTACCGTTaGCTGGAAGAACGCTCAAAG +
Preference number: 5 (lower is better)
Translates to: RAGGTSTIIVVWLAFLIWDMVYR*LEERSK
Trigger: CTTTGAGCGTTCTTCCAGCAAACGGTACACCATGTC...CCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp AAATGTAGGTGTTCAGATGTCGGTTGTTGCTGTCAGCCAACTGCTCTGCCAGCCGACATGGTGTACCGTTaGCTGGAAGAACGCTCAAAG +
Preference number: 5 (lower is better)
Translates to: KCRCSDVGCCCQPTALPADMVYR*LEERSK
Trigger: CTTTGAGCGTTCTTCCAGCAAACGGTACACCATGTC...GGCTGGCAGAGCAGTTGGCTGACAGCAACAACCGACATCTGAACACCTACATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp AATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTGAGCAAGACATGGTGTACCGTTaGCTGGAAGAACGCTCAAAG +
Preference number: 5 (lower is better)
Translates to: NHRGLACVSYLAGERGEQDMVYR*LEERSK
Trigger: CTTTGAGCGTTCTTCCAGCAAACGGTACACCATGTC...TTGCTCACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp GTTTTCCTTTGCATTCAAGTGGGCCTTAGAGATGCTGGAGAAGAACAAATGGAACCATCCTCATCCCGCTaGTCACCGTCAGGCCCTGCA +
Preference number: 5 (lower is better)
Translates to: VFLCIQVGLRDAGEEQMEPSSSR*SPSGPA
Trigger: TGCAGGGCCTGACGGTGACAAGCGGGATGAGGATGG...TTCCATTTGTTCTTCTCCAGCATCTCTAAGGCCCACTTGAATGCAAAGGAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp AGGTTGAAGACAGACAAGACAAACGTCTCTATTCTCTACAAAGAGAAGGATGGGCCATCCTCATCCCGCTaGTCACCGTCAGGCCCTGCA +
Preference number: 5 (lower is better)
Translates to: RLKTDKTNVSILYKEKDGPSSSR*SPSGPA
Trigger: TGCAGGGCCTGACGGTGACAAGCGGGATGAGGATGG...CCCATCCTTCTCTTTGTAGAGAATAGAGACGTTTGTCTTGTCTGTCTTCAACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CAA 90 bp GCAGCTGGGACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTAAAGAACTTTAGCTCCTaGATCTTGGTTGGAGTCCTG +
Preference number: 5 (lower is better)
Translates to: AAGTSVLRRRIQNEGPFLKNFSS*ILVGVL
Trigger: CAGGACTCCAACCAAGATCAAGGAGCTAAAGTTCTT...TAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGTCCCAGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000202028.9
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
CDS-3UTR CAA 90 bp GACTTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGTCCTTTTGAGCTCATaGATGCTGGCCTGGTGCTTC +
Preference number: 5 (lower is better)
Translates to: DFYNHRGLACVSYLAGERVLLSS*MLAWCF
Trigger: GAAGCACCAGGCCAGCATCAATGAGCTCAAAAGGAC...CCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGAAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp AGGAAATGTAGGTGTTCAGATGTCGGTTGTTGCTGTCAGCCAACTGCTCTGCCATGGATGAGTTTGCTGTaGGGCTCCTTCAGGGTCCTT +
Preference number: 5 (lower is better)
Translates to: RKCRCSDVGCCCQPTALPWMSLL*GSFRVL
Trigger: AAGGACCCTGAAGGAGCCCAACAGCAAACTCATCCA...TGGCAGAGCAGTTGGCTGACAGCAACAACCGACATCTGAACACCTACATTTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp CCACCAGTTCTTCAATTTGTCTGCAAAGGAAATGTAGGTGTTCAGATGTCGGTTCGGGGACGTGGTGGTTaGACTTTCTCCTCGGAGCCC +
Preference number: 5 (lower is better)
Translates to: PPVLQFVCKGNVGVQMSVRGRGG*TFSSEP
Trigger: GGGCTCCGAGGAGAAAGTCAAACCACCACGTCCCCG...AACCGACATCTGAACACCTACATTTCCTTTGCAGACAAATTGAAGAACTGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CAA 90 bp TATATATATATGCTTTTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGCAGGTGTCCGAGTCGCTTTaGTCCCGGTCGAGCTCAGGC +
Preference number: 5 (lower is better)
Translates to: YIYMLFPSQSLISDSTSQVSESL*SRSSSG
Trigger: GCCTGAGCTCGACCGGGACAAAAGCGACTCGGACAC...CTGCGACGTACTGTCACTGATGAGAGACTGGGAAGGGAAAAGCATATATATATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CAA 90 bp GACTTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGTCAGGATGCTGCAGTTaGGCCTCCTTGATGGCCAAA +
Preference number: 5 (lower is better)
Translates to: DFYNHRGLACVSYLAGERSGCCS*ASLMAK
Trigger: TTTGGCCATCAAGGAGGCCAAACTGCAGCATCCTGA...CCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGAAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp TTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGCAGCTGGGACGTCAGTGTCTGTATACGACAGCTTaGGTTACCAGCATATCAGGA +
Preference number: 5 (lower is better)
Translates to: FPSQSLISDSTSQLGRQCLYTTA*VTSISG
Trigger: TCCTGATATGCTGGTAACCAAAGCTGTCGTATACAG...ACACTGACGTCCCAGCTGCGACGTACTGTCACTGATGAGAGACTGGGAAGGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp GCTCGTCTGCTAACTGTAACGTGCAGAACCAGGGCGGGAGGGACTTCTACAATCCTGTATACGACAGCTTaGGTTACCAGCATATCAGGA +
Preference number: 5 (lower is better)
Translates to: ARLLTVTCRTRAGGTSTILYTTA*VTSISG
Trigger: TCCTGATATGCTGGTAACCAAAGCTGTCGTATACAG...GATTGTAGAAGTCCCTCCCGCCCTGGTTCTGCACGTTACAGTTAGCAGACGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp TTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTGTTCTCTGGCTTGGGTaGGACCAGAAATGCCAGGAT +
Preference number: 5 (lower is better)
Translates to: FYNHRGLACVSYLAGERGVLWLG*DQKCQD
Trigger: ATCCTGGCATTTCTGGTCCAACCCAAGCCAGAGAAC...ACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp GACTTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGTTCTCTGGCTTGGGTaGGACCAGAAATGCCAGGAT +
Preference number: 5 (lower is better)
Translates to: DFYNHRGLACVSYLAGERVLWLG*DQKCQD
Trigger: ATCCTGGCATTTCTGGTCCAACCCAAGCCAGAGAAC...CCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGAAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp TTAATGGTTCTCTGGCTTGGGTTGGACCAGAAATGCCAGGATCTCTTCACAGAGGCTGGGACGTCAGTGTaGCGTCGGAGAATCCAGAAT +
Preference number: 5 (lower is better)
Translates to: LMVLWLGLDQKCQDLFTEAGTSV*RRRIQN
Trigger: ATTCTGGATTCTCCGACGCAACACTGACGTCCCAGC...CTCTGTGAAGAGATCCTGGCATTTCTGGTCCAACCCAAGCCAGAGAACCATTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp TTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTTCATCGTGGTCTGGCTaGCGTTTCTTATTTGGCGGG +
Preference number: 5 (lower is better)
Translates to: FYNHRGLACVSYLAGERGSSWSG*RFLFGG
Trigger: CCCGCCAAATAAGAAACGCAAGCCAGACCACGATGA...ACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp CTGCTCTGCCAGCCCCAGCAGCAGTGCAAGGATGCGGTGTTTCCTGTATATATAATGGGCCAGCCATGGTaGAAATATAAAGCTGGCTCA +
Preference number: 5 (lower is better)
Translates to: LLCQPQQQCKDAVFPVYIMGQPW*KYKAGS
Trigger: TGAGCCAGCTTTATATTTCAACCATGGCTGGCCCAT...TATATATACAGGAAACACCGCATCCTTGCACTGCTGCTGGGGCTGGCAGAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CAA 90 bp TGCTGGAGAAGAACAAATGGAATTGCTCGTCTGCTAACTGTAACGTGCAGAACCCCACCACTCCAGCTCTaGACCCAGAAAGAGGGGGAA +
Preference number: 5 (lower is better)
Translates to: CWRRTNGIARLLTVTCRTPPLQL*TQKEGE
Trigger: TTCCCCCTCTTTCTGGGTCAAGAGCTGGAGTGGTGG...GGTTCTGCACGTTACAGTTAGCAGACGAGCAATTCCATTTGTTCTTCTCCAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CAA 90 bp TTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGCAGCTGGGACGTCAGTGTTTATTTCGAGTGATGTaGCTCATGCAGTTTCAGGCC +
Preference number: 5 (lower is better)
Translates to: FPSQSLISDSTSQLGRQCLFRVM*LMQFQA
Trigger: GGCCTGAAACTGCATGAGCAACATCACTCGAAATAA...ACACTGACGTCCCAGCTGCGACGTACTGTCACTGATGAGAGACTGGGAAGGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CAA 90 bp CCAGGATGGTCACCCAGAACTCCTAACCGCCCTCAGGGACTTTTTCCACTATGCTTATTTCGAGTGATGTaGCTCATGCAGTTTCAGGCC +
Preference number: 5 (lower is better)
Translates to: PGWSPRTPNRPQGLFPLCLFRVM*LMQFQA
Trigger: GGCCTGAAACTGCATGAGCAACATCACTCGAAATAA...GCATAGTGGAAAAAGTCCCTGAGGGCGGTTAGGAGTTCTGGGTGACCATCCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CAA 90 bp TTTCTTTTTCTCATTTCAAAGGAGAGTCATCTGCAGTGGCCCTCAGAAGGACCAGTCCTCTGGGACTCATaGGCTTTCTCAGGGGTGCCC +
Preference number: 5 (lower is better)
Translates to: FLFLISKESHLQWPSEGPVLWDS*AFSGVP
Trigger: GGGCACCCCTGAGAAAGCCAATGAGTCCCAGAGGAC...TGGTCCTTCTGAGGGCCACTGCAGATGACTCTCCTTTGAAATGAGAAAAAGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS-3UTR CAA 90 bp CCAGCCCCAGCAGCAGTGCAAGGATGCGGTGTTTCCTGTATATATATCTATATCTTGGAGAGTCTGCCGTaGGCAAGGATACCAGCAAGG +
Preference number: 5 (lower is better)
Translates to: PAPAAVQGCGVSCIYIYILESLP*ARIPAR
Trigger: CCTTGCTGGTATCCTTGCCAACGGCAGACTCTCCAA...GATATAGATATATATACAGGAAACACCGCATCCTTGCACTGCTGCTGGGGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS-3UTR CAA 90 bp GAAGGCCCCTTCTTAATGGTTCTCTGGCTTGGGTTGGACCAGAAATGCCAGGATTCTTTGGGTGGGAAGTaGCCTCTGTCTGGTTTGACT +
Preference number: 5 (lower is better)
Translates to: EGPFLMVLWLGLDQKCQDSLGGK*PLSGLT
Trigger: AGTCAAACCAGACAGAGGCAACTTCCCACCCAAAGA...ATCCTGGCATTTCTGGTCCAACCCAAGCCAGAGAACCATTAAGAAGGGGCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS-3UTR CAA 90 bp GCATTCAAGTGGGCCTTAGAGATGCTGGAGAAGAACAAATGGAATTGCTCGTCTCACCACAAACCCTACTaGGTCCTTGGGCTCTGGGCT +
Preference number: 5 (lower is better)
Translates to: AFKWALEMLEKNKWNCSSHHKPY*VLGLWA
Trigger: AGCCCAGAGCCCAAGGACCAAGTAGGGTTTGTGGTG...AGACGAGCAATTCCATTTGTTCTTCTCCAGCATCTCTAAGGCCCACTTGAATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS TCA 90 bp CAGGCACCCAAGGTCACAGAGAGAATCAGACATAGAAGAAGGATTTaGACTCAGGCCTCCTTGATGAAAAAGCCCATGGTCTCTCCGTGG +
Preference number: 5 (lower is better)
Translates to: QAPKVTERIRHRRRI*TQASLMKKPMVSPW
Trigger: CCACGGAGAGACCATGGGCTTTTTCATCAAGGAGGCCTGAGTTCAAATCCTTCTTCTATGTCTGATTCTCTCTGTGACCTTGGGTGCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447825.5
CDS TCA 90 bp TTGCTCTTCTGTTTCCCACCATTTCTTCTGTGGCCACTTCCACTTTaGACTTGTCCACCAGAACGTCTACCTTGGAGAGTCTGCCGTTGG +
Preference number: 5 (lower is better)
Translates to: LLFCFPPFLLWPLPL*TCPPERLPWRVCRW
Trigger: CCAACGGCAGACTCTCCAAGGTAGACGTTCTGGTGGACAAGTTCAAAGTGGAAGTGGCCACAGAAGAAATGGTGGGAAACAGAAGAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS CCA 90 bp CTGTTGGGCTCCTTCAGGGTCCTTTTGAGCTCATTGATGCTGGCCTaGTGCTTCAGCAAGACATCTTCTGGCTTGTCTAAGAACTTTAGC +
Preference number: 5 (lower is better)
Translates to: LLGSFRVLLSSLMLA*CFSKTSSGLSKNFS
Trigger: GCTAAAGTTCTTAGACAAGCCAGAAGATGTCTTGCTGAAGCACCAGGCCAGCATCAATGAGCTCAAAAGGACCCTGAAGGAGCCCAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000202028.9
ENST00000373950.6
ENST00000441639.5
ENST00000451082.5
ENST00000628415.2
CDS CCA 90 bp TCCTCTCTGCAAAGGAAGTATCAGTTTCATTGCTCAACTCAGCTCTaGCTTCTGCGTGGGCTGGATCCAATAGAAACGACTGGAGTCCTC +
Preference number: 5 (lower is better)
Translates to: SSLQRKYQFHCSTQL*LLRGLDPIETTGVL
Trigger: GAGGACTCCAGTCGTTTCTATTGGATCCAGCCCACGCAGAAGCCAGAGCTGAGTTGAGCAATGAAACTGATACTTCCTTTGCAGAGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS-3UTR CAA 90 bp TCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTGGCACTCTTGTATTTCTaGGCAATCTTCTGGGGCGAT +
Preference number: 5 (lower is better)
Translates to: STIIVVWLAFLIWRGKGVALLYF*AIFWGD
Trigger: ATCGCCCCAGAAGATTGCCAAGAAATACAAGAGTGC...CACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp TTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTAATGGTTCTCTGGCTTGGGGCACTCTTGTATTTCTaGGCAATCTTCTGGGGCGAT +
Preference number: 5 (lower is better)
Translates to: LRRRIQNEGPFLMVLWLGALLYF*AIFWGD
Trigger: ATCGCCCCAGAAGATTGCCAAGAAATACAAGAGTGC...CCCAAGCCAGAGAACCATTAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp AACCAGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATCGGCAGATGGCACTCTaGTATTTCTTGGCAATCTTC +
Preference number: 5 (lower is better)
Translates to: NQGGRDFYNHRGLACVSYRQMAL*YFLAIF
Trigger: GAAGATTGCCAAGAAATACAAGAGTGCCATCTGCCG...ATAAGAAACGCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCTGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp AGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGGCAGATGGCACTCTaGTATTTCTTGGCAATCTTC +
Preference number: 5 (lower is better)
Translates to: RAGGTSTIIVVWLAFLIWRQMAL*YFLAIF
Trigger: GAAGATTGCCAAGAAATACAAGAGTGCCATCTGCCG...CCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp TCCCACCTTCTTCAGCCTGAGAATAGTCCCTGGCACAAGCAGGTAATCAGTAAATCCTTCTCTAGGAGGTaGAGGTGTTCACAGACCAGG +
Preference number: 5 (lower is better)
Translates to: SHLLQPENSPWHKQVISKSFSRR*RCSQTR
Trigger: CCTGGTCTGTGAACACCTCAACCTCCTAGAGAAGGA...TTTACTGATTACCTGCTTGTGCCAGGGACTATTCTCAGGCTGAAGAAGGTGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CAA 90 bp TTAATGGTTCTCTGGCTTGGGTTGGACCAGAAATGCCAGGATCTCTTCACAGAGTCCTTCTCTAGGAGGTaGAGGTGTTCACAGACCAGG +
Preference number: 5 (lower is better)
Translates to: LMVLWLGLDQKCQDLFTESFSRR*RCSQTR
Trigger: CCTGGTCTGTGAACACCTCAACCTCCTAGAGAAGGA...CTCTGTGAAGAGATCCTGGCATTTCTGGTCCAACCCAAGCCAGAGAACCATTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp ATATATATGCTTTTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGCAGCTGTGCTTCTTGATCTCCTaGGAGGGGTCCAGCCAGTTC +
Preference number: 5 (lower is better)
Translates to: IYMLFPSQSLISDSTSQLCFLIS*EGSSQF
Trigger: GAACTGGCTGGACCCCTCCAAGGAGATCAAGAAGCA...CAGCTGCGACGTACTGTCACTGATGAGAGACTGGGAAGGGAAAAGCATATATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp CATCTTCTACAATGGCTGAGAGCACCACCTCCCTTTGGATATGGAGTTGGTTATATGCCCTCAGAGTCCTaGGCATGGTGCAGGTCTACT +
Preference number: 5 (lower is better)
Translates to: HLLQWLRAPPPFGYGVGYMPSES*AWCRST
Trigger: AGTAGACCTGCACCATGCCAAGGACTCTGAGGGCAT...ATAACCAACTCCATATCCAAAGGGAGGTGGTGCTCTCAGCCATTGTAGAAGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CAA 90 bp ACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTAATGGTTCTCAATTGTGCTCTCAAATaGCTCATACTCCCCAGGCCG +
Preference number: 5 (lower is better)
Translates to: TSVLRRRIQNEGPFLMVLNCALK*LILPRP
Trigger: CGGCCTGGGGAGTATGAGCAATTTGAGAGCACAATT...GAGAACCATTAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp TCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTGTTTAGCTCCTTGATCTaGGTTGGAGTCCTGACCTCT +
Preference number: 5 (lower is better)
Translates to: STIIVVWLAFLIWRGKGVFSSLI*VGVLTS
Trigger: AGAGGTCAGGACTCCAACCAAGATCAAGGAGCTAAA...CACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp AGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGTTTAGCTCCTTGATCTaGGTTGGAGTCCTGACCTCT +
Preference number: 5 (lower is better)
Translates to: RAGGTSTIIVVWLAFLIWFSSLI*VGVLTS
Trigger: AGAGGTCAGGACTCCAACCAAGATCAAGGAGCTAAA...CCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp ACCAGTTCTTCAATTTGTCTGCAAAGGAAATGTAGGTGTTCAGATGTCGGTTGTGTGTCCGAGTCGCTTTaGTCCCGGTCGAGCTCAGGC +
Preference number: 5 (lower is better)
Translates to: TSSSICLQRKCRCSDVGCVSESL*SRSSSG
Trigger: GCCTGAGCTCGACCGGGACAAAAGCGACTCGGACAC...ACAACCGACATCTGAACACCTACATTTCCTTTGCAGACAAATTGAAGAACTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CAA 90 bp TCTTCAATTTGTCTGCAAAGGAAATGTAGGTGTTCAGATGTCGGTTGTTGCTGTGCCCCCTTCCCGGACTaGAGACTGTTCTCCTGGGTG +
Preference number: 5 (lower is better)
Translates to: SSICLQRKCRCSDVGCCCAPFPD*RLFSWV
Trigger: CACCCAGGAGAACAGTCTCAAGTCCGGGAAGGGGGC...ACAGCAACAACCGACATCTGAACACCTACATTTCCTTTGCAGACAAATTGAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000202028.9
ENST00000441639.5
CDS-3UTR CAA 90 bp CCAGCCCCAGCAGCAGTGCAAGGATGCGGTGTTTCCTGTATATATATCTATATCCCTCCTTTCACAGTTTaGGTGACATGGGTGGTGGTG +
Preference number: 5 (lower is better)
Translates to: PAPAAVQGCGVSCIYIYIPPFTV*VTWVVV
Trigger: CACCACCACCCATGTCACCAAAACTGTGAAAGGAGG...GATATAGATATATATACAGGAAACACCGCATCCTTGCACTGCTGCTGGGGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp TATATATATATGCTTTTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGCAGTGCAGTTTGGCCTCCTaGATGGCCAAAGCCAGGGCC +
Preference number: 5 (lower is better)
Translates to: YIYMLFPSQSLISDSTSQCSLAS*MAKARA
Trigger: GGCCCTGGCTTTGGCCATCAAGGAGGCCAAACTGCA...CTGCGACGTACTGTCACTGATGAGAGACTGGGAAGGGAAAAGCATATATATATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp GTTTTCCTTTGCATTCAAGTGGGCCTTAGAGATGCTGGAGAAGAACAAATGGAATGCAGTTTGGCCTCCTaGATGGCCAAAGCCAGGGCC +
Preference number: 5 (lower is better)
Translates to: VFLCIQVGLRDAGEEQMECSLAS*MAKARA
Trigger: GGCCCTGGCTTTGGCCATCAAGGAGGCCAAACTGCA...TTCCATTTGTTCTTCTCCAGCATCTCTAAGGCCCACTTGAATGCAAAGGAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp TTAATGGTTCTCTGGCTTGGGTTGGACCAGAAATGCCAGGATCTCTTCACAGAGGTGTTCAGATGTCGGTaGTTGCTGTCAGCCAACTGC +
Preference number: 5 (lower is better)
Translates to: LMVLWLGLDQKCQDLFTEVFRCR*LLSANC
Trigger: GCAGTTGGCTGACAGCAACAACCGACATCTGAACAC...CTCTGTGAAGAGATCCTGGCATTTCTGGTCCAACCCAAGCCAGAGAACCATTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp ACTCTCAAGAAGGGCAGGAAGAAGGTTCTGTGGCTTTTCCACCAGGATTGTAGAGTGTTCAGATGTCGGTaGTTGCTGTCAGCCAACTGC +
Preference number: 5 (lower is better)
Translates to: TLKKGRKKVLWLFHQDCRVFRCR*LLSANC
Trigger: GCAGTTGGCTGACAGCAACAACCGACATCTGAACAC...TCTACAATCCTGGTGGAAAAGCCACAGAACCTTCTTCCTGCCCTTCTTGAGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CAA 90 bp ATATATATGCTTTTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGCAGCTGGCTTGCGTTTCTTATTaGGCGGGGGAAAGGGGTGAG +
Preference number: 5 (lower is better)
Translates to: IYMLFPSQSLISDSTSQLACVSY*AGERGE
Trigger: CTCACCCCTTTCCCCCGCCAAATAAGAAACGCAAGC...CAGCTGCGACGTACTGTCACTGATGAGAGACTGGGAAGGGAAAAGCATATATAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp ACTCTCAAGAAGGGCAGGAAGAAGGTTCTGTGGCTTTTCCACCAGGATTGTAGATCATCGTGGTCTGGCTaGCGTTTCTTATTTGGCGGG +
Preference number: 5 (lower is better)
Translates to: TLKKGRKKVLWLFHQDCRSSWSG*RFLFGG
Trigger: CCCGCCAAATAAGAAACGCAAGCCAGACCACGATGA...TCTACAATCCTGGTGGAAAAGCCACAGAACCTTCTTCCTGCCCTTCTTGAGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CAA 90 bp TATATATATATGCTTTTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGCAGGCCCCCTTCCCGGACTaGAGACTGTTCTCCATGGTG +
Preference number: 5 (lower is better)
Translates to: YIYMLFPSQSLISDSTSQAPFPD*RLFSMV
Trigger: CACCATGGAGAACAGTCTCAAGTCCGGGAAGGGGGC...CTGCGACGTACTGTCACTGATGAGAGACTGGGAAGGGAAAAGCATATATATATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp GACTTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGTGTGTTGCTTCTTTCTaGCCAAACCCACACCTCTCC +
Preference number: 5 (lower is better)
Translates to: DFYNHRGLACVSYLAGERCVASF*PNPHLS
Trigger: GGAGAGGTGTGGGTTTGGCAAGAAAGAAGCAACACA...CCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGAAGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CAA 90 bp CTCCCCTCCCACCTTCTTCAGCCTGAGAATAGTCCCTGGCACAAGCAGGTAATCCCTTTGGATATGGAGTaGGTTATTACAATGGGGTCA +
Preference number: 5 (lower is better)
Translates to: LPSHLLQPENSPWHKQVIPLDME*VITMGS
Trigger: TGACCCCATTGTAATAACCAACTCCATATCCAAAGG...GATTACCTGCTTGTGCCAGGGACTATTCTCAGGCTGAAGAAGGTGGGAGGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CAA 90 bp AAGACTGAAAACCAAGGCAAGCCCCGTAGGGAGATAAGGACTAAGCCAGGGACCTTTGCAAATGCAGTTTaGATCTTTCAGGGTCTGCCC +
Preference number: 5 (lower is better)
Translates to: KTENQGKPRREIRTKPGTFANAV*IFQGLP
Trigger: GGGCAGACCCTGAAAGATCAAAACTGCATTTGCAAA...GGTCCCTGGCTTAGTCCTTATCTCCCTACGGGGCTTGCCTTGGTTTTCAGTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CAA 90 bp CCACCATCTTCTACAATGGCTGAGAGCACCACCTCCCTTTGGATATGGAGTTGGAGTTTCAGGCCAGTCTaGGAATGTGCTTGCAGGATT +
Preference number: 5 (lower is better)
Translates to: PPSSTMAESTTSLWIWSWSFRPV*ECACRI
Trigger: AATCCTGCAAGCACATTCCAAGACTGGCCTGAAACT...CCAACTCCATATCCAAAGGGAGGTGGTGCTCTCAGCCATTGTAGAAGATGGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CAA 90 bp TCGTCTGCTAACTGTAACGTGCAGAACCAGGGCGGGAGGGACTTCTACAATCATAGTTTCAGGCCAGTCTaGGAATGTGCTTGCAGGATT +
Preference number: 5 (lower is better)
Translates to: SSANCNVQNQGGRDFYNHSFRPV*ECACRI
Trigger: AATCCTGCAAGCACATTCCAAGACTGGCCTGAAACT...ATGATTGTAGAAGTCCCTCCCGCCCTGGTTCTGCACGTTACAGTTAGCAGACGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CAA 90 bp ACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTAATGGTTCTCCATTTGGAAGGGACCTaGCTTCACCCTCACTCATTC +
Preference number: 5 (lower is better)
Translates to: TSVLRRRIQNEGPFLMVLHLEGT*LHPHSF
Trigger: GAATGAGTGAGGGTGAAGCAAGGTCCCTTCCAAATG...GAGAACCATTAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS-3UTR CAA 90 bp GCCAGTTCAGTGAGATCTAGGAACCTCAGGATACATCAATCACAGTCAGATAATCCCTTCCCAGGGGTGTaGGCTGCTAAGTTGGTGGAG +
Preference number: 5 (lower is better)
Translates to: ASSVRSRNLRIHQSQSDNPFPGV*AAKLVE
Trigger: CTCCACCAACTTAGCAGCCAACACCCCTGGGAAGGG...ATTATCTGACTGTGATTGATGTATCCTGAGGTTCCTAGATCTCACTGAACTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS CCA 90 bp CAAGAACTTCTGTCAGTCAGGCACTTGTCTCACTTAAGTGGCAGCTaGGATTATCCCCATTTTGCAGATCAGGAGCCTATCCTAGGTCTC +
Preference number: 5 (lower is better)
Translates to: QELLSVRHLSHLSGS*DYPHFADQEPILGL
Trigger: GAGACCTAGGATAGGCTCCTGATCTGCAAAATGGGGATAATCCCAGCTGCCACTTAAGTGAGACAAGTGCCTGACTGACAGAAGTTCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000202028.9
CDS-3UTR CAA 90 bp CTGCCAGCCCCAGCAGCAGTGCAAGGATGCGGTGTTTCCTGTATATATATCTATGCACTCTTGTATTTCTaGGCAATCTTCTGGGGCGAT +
Preference number: 5 (lower is better)
Translates to: LPAPAAVQGCGVSCIYIYALLYF*AIFWGD
Trigger: ATCGCCCCAGAAGATTGCCAAGAAATACAAGAGTGC...ATAGATATATATACAGGAAACACCGCATCCTTGCACTGCTGCTGGGGCTGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp GCATTCAAGTGGGCCTTAGAGATGCTGGAGAAGAACAAATGGAATTGCTCGTCTTCCTTCTCTAGGAGGTaGAGGTGTTCACAGACCAGG +
Preference number: 5 (lower is better)
Translates to: AFKWALEMLEKNKWNCSSSFSRR*RCSQTR
Trigger: CCTGGTCTGTGAACACCTCAACCTCCTAGAGAAGGA...AGACGAGCAATTCCATTTGTTCTTCTCCAGCATCTCTAAGGCCCACTTGAATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp GTTTTCCTTTGCATTCAAGTGGGCCTTAGAGATGCTGGAGAAGAACAAATGGAACTCCGGATCTGCTTCTaGATCTCCTTGGAGGGGTCC +
Preference number: 5 (lower is better)
Translates to: VFLCIQVGLRDAGEEQMELRICF*ISLEGS
Trigger: GGACCCCTCCAAGGAGATCAAGAAGCAGATCCGGAG...TTCCATTTGTTCTTCTCCAGCATCTCTAAGGCCCACTTGAATGCAAAGGAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp CTTTTCTTTTTCTCATTTCAAAGGAGAGTCATCTGCAGTGGCCCTCAGAAGGACGAGATCTTGAGGATCTaGGGCCAGGCAAAGCGGTTG +
Preference number: 5 (lower is better)
Translates to: LFFFSFQRRVICSGPQKDEILRI*GQAKRL
Trigger: CAACCGCTTTGCCTGGCCCAAGATCCTCAAGATCTC...GTCCTTCTGAGGGCCACTGCAGATGACTCTCCTTTGAAATGAGAAAAAGAAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp CCACCAGTTCTTCAATTTGTCTGCAAAGGAAATGTAGGTGTTCAGATGTCGGTTCCACTGTACCGGAACTaGGAGCCCATCACCAGGAAG +
Preference number: 5 (lower is better)
Translates to: PPVLQFVCKGNVGVQMSVPLYRN*EPITRK
Trigger: CTTCCTGGTGATGGGCTCCAAGTTCCGGTACAGTGG...AACCGACATCTGAACACCTACATTTCCTTTGCAGACAAATTGAAGAACTGGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp TTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTAATGGTTCTCTGGCTTGGGAAGAACTTTAGCTCCTaGATCTTGGTTGGAGTCCTG +
Preference number: 5 (lower is better)
Translates to: LRRRIQNEGPFLMVLWLGKNFSS*ILVGVL
Trigger: CAGGACTCCAACCAAGATCAAGGAGCTAAAGTTCTT...CCCAAGCCAGAGAACCATTAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000202028.9
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
CDS-3UTR CAA 90 bp GAAGGTGTCTTGAACTGGCATTTTGGGGACGACATCTGTGTTGCTTCTTTCTTGGTCCTTTTGAGCTCATaGATGCTGGCCTGGTGCTTC +
Preference number: 5 (lower is better)
Translates to: EGVLNWHFGDDICVASFLVLLSS*MLAWCF
Trigger: GAAGCACCAGGCCAGCATCAATGAGCTCAAAAGGAC...CAAGAAAGAAGCAACACAGATGTCGTCCCCAAAATGCCAGTTCAAGACACCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CAA 90 bp GCATTCAAGTGGGCCTTAGAGATGCTGGAGAAGAACAAATGGAATTGCTCGTCTTCCTTCAGGGTCCTTTaGAGCTCATTGATGCTGGCC +
Preference number: 5 (lower is better)
Translates to: AFKWALEMLEKNKWNCSSSFRVL*SSLMLA
Trigger: GGCCAGCATCAATGAGCTCAAAAGGACCCTGAAGGA...AGACGAGCAATTCCATTTGTTCTTCTCCAGCATCTCTAAGGCCCACTTGAATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp TATATATATATGCTTTTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGCAGTCCCGGTGGATGAGTTaGCTGTTGGGCTCCTTCAGG +
Preference number: 5 (lower is better)
Translates to: YIYMLFPSQSLISDSTSQSRWMS*LLGSFR
Trigger: CCTGAAGGAGCCCAACAGCAAACTCATCCACCGGGA...CTGCGACGTACTGTCACTGATGAGAGACTGGGAAGGGAAAAGCATATATATATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp TCTTCAATTTGTCTGCAAAGGAAATGTAGGTGTTCAGATGTCGGTTGTTGCTGTAGCCCTGCTCTCTCATaGGCTTTCTCAGGGGTGCCC +
Preference number: 5 (lower is better)
Translates to: SSICLQRKCRCSDVGCCCSPALS*AFSGVP
Trigger: GGGCACCCCTGAGAAAGCCAATGAGAGAGCAGGGCT...ACAGCAACAACCGACATCTGAACACCTACATTTCCTTTGCAGACAAATTGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
CDS-3UTR CAA 90 bp ATCTATATATATATGCTTTTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGGTGATGCTGGAGCACTaGCGCTCAATGGCCAGGTGG +
Preference number: 5 (lower is better)
Translates to: IYIYMLFPSQSLISDSTSVMLEH*RSMARW
Trigger: CCACCTGGCCATTGAGCGCAAGTGCTCCAGCATCAC...CGACGTACTGTCACTGATGAGAGACTGGGAAGGGAAAAGCATATATATATAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CAA 90 bp TGCTGGAGAAGAACAAATGGAATTGCTCGTCTGCTAACTGTAACGTGCAGAACCCCTCCTTTCACAGTTTaGGTGACATGGGTGGTGGTG +
Preference number: 5 (lower is better)
Translates to: CWRRTNGIARLLTVTCRTPPFTV*VTWVVV
Trigger: CACCACCACCCATGTCACCAAAACTGTGAAAGGAGG...GGTTCTGCACGTTACAGTTAGCAGACGAGCAATTCCATTTGTTCTTCTCCAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp CTGCCAGCCCCAGCAGCAGTGCAAGGATGCGGTGTTTCCTGTATATATATCTATTTCGCTTCTCGATCCTaGTCTCAGAAAACCCTCCTT +
Preference number: 5 (lower is better)
Translates to: LPAPAAVQGCGVSCIYIYFASRS*SQKTLL
Trigger: AAGGAGGGTTTTCTGAGACAAGGATCGAGAAGCGAA...ATAGATATATATACAGGAAACACCGCATCCTTGCACTGCTGCTGGGGCTGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp ACGTCAGTGTTGCGTCGGAGAATCCAGAATGAAGGCCCCTTCTTAATGGTTCTCTTCGCTTCTCGATCCTaGTCTCAGAAAACCCTCCTT +
Preference number: 5 (lower is better)
Translates to: TSVLRRRIQNEGPFLMVLFASRS*SQKTLL
Trigger: AAGGAGGGTTTTCTGAGACAAGGATCGAGAAGCGAA...GAGAACCATTAAGAAGGGGCCTTCATTCTGGATTCTCCGACGCAACACTGACGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp AGGAAATGTAGGTGTTCAGATGTCGGTTGTTGCTGTCAGCCAACTGCTCTGCCATTCGCTTCTCGATCCTaGTCTCAGAAAACCCTCCTT +
Preference number: 5 (lower is better)
Translates to: RKCRCSDVGCCCQPTALPFASRS*SQKTLL
Trigger: AAGGAGGGTTTTCTGAGACAAGGATCGAGAAGCGAA...TGGCAGAGCAGTTGGCTGACAGCAACAACCGACATCTGAACACCTACATTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp ACCAGTTCTTCAATTTGTCTGCAAAGGAAATGTAGGTGTTCAGATGTCGGTTGTTGCAGTTTGGCCTCCTaGATGGCCAAAGCCAGGGCC +
Preference number: 5 (lower is better)
Translates to: TSSSICLQRKCRCSDVGCCSLAS*MAKARA
Trigger: GGCCCTGGCTTTGGCCATCAAGGAGGCCAAACTGCA...ACAACCGACATCTGAACACCTACATTTCCTTTGCAGACAAATTGAAGAACTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp AACCAGGGCGGGAGGGACTTCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATCTGTATACGACAGCTTaGGTTACCAGCATATCAGGA +
Preference number: 5 (lower is better)
Translates to: NQGGRDFYNHRGLACVSYLYTTA*VTSISG
Trigger: TCCTGATATGCTGGTAACCAAAGCTGTCGTATACAG...ATAAGAAACGCAAGCCAGACCACGATGATTGTAGAAGTCCCTCCCGCCCTGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp GAGGCGGGAGAGAGGAAGGTAGGTTTTGCAGCCCAGTGTCAAGATCCAGAAAGTCCTTTGGATATGGAGTaGGTTATTACAATGGGGTCA +
Preference number: 5 (lower is better)
Translates to: EAGERKVGFAAQCQDPESPLDME*VITMGS
Trigger: TGACCCCATTGTAATAACCAACTCCATATCCAAAGG...ACTTTCTGGATCTTGACACTGGGCTGCAAAACCTACCTTCCTCTCTCCCGCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CAA 90 bp CTGCCAGCCCCAGCAGCAGTGCAAGGATGCGGTGTTTCCTGTATATATATCTATGAGCACCACCTCCCTTaGGATATGGAGTTGGTTATT +
Preference number: 5 (lower is better)
Translates to: LPAPAAVQGCGVSCIYIYEHHLP*DMELVI
Trigger: AATAACCAACTCCATATCCAAAGGGAGGTGGTGCTC...ATAGATATATATACAGGAAACACCGCATCCTTGCACTGCTGCTGGGGCTGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CAA 90 bp TCTACAATCATCGTGGTCTGGCTTGCGTTTCTTATTTGGCGGGGGAAAGGGGTGTTTGCAAATGCAGTTTaGATCTTTCAGGGTCTGCCC +
Preference number: 5 (lower is better)
Translates to: STIIVVWLAFLIWRGKGVFANAV*IFQGLP
Trigger: GGGCAGACCCTGAAAGATCAAAACTGCATTTGCAAA...CACCCCTTTCCCCCGCCAAATAAGAAACGCAAGCCAGACCACGATGATTGTAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CAA 90 bp TTAATGGTTCTCTGGCTTGGGTTGGACCAGAAATGCCAGGATCTCTTCACAGAGTGTGATGGGAGCTTCTaGAAGGGTTCCTGTGGTCTT +
Preference number: 5 (lower is better)
Translates to: LMVLWLGLDQKCQDLFTECDGSF*KGSCGL
Trigger: AAGACCACAGGAACCCTTCAAGAAGCTCCCATCACA...CTCTGTGAAGAGATCCTGGCATTTCTGGTCCAACCCAAGCCAGAGAACCATTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CAA 90 bp AGGAAATGTAGGTGTTCAGATGTCGGTTGTTGCTGTCAGCCAACTGCTCTGCCAATGGGCCAGCCATGGTaGAAATATAAAGCTGGCTCA +
Preference number: 5 (lower is better)
Translates to: RKCRCSDVGCCCQPTALPMGQPW*KYKAGS
Trigger: TGAGCCAGCTTTATATTTCAACCATGGCTGGCCCAT...TGGCAGAGCAGTTGGCTGACAGCAACAACCGACATCTGAACACCTACATTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CAA 90 bp GAGGCGGGAGAGAGGAAGGTAGGTTTTGCAGCCCAGTGTCAAGATCCAGAAAGTTTCTTTCTGCTTATTTaGCAAGTCGGGAAACTGAGG +
Preference number: 5 (lower is better)
Translates to: EAGERKVGFAAQCQDPESFFLLI*QVGKLR
Trigger: CCTCAGTTTCCCGACTTGCAAAATAAGCAGAAAGAA...ACTTTCTGGATCTTGACACTGGGCTGCAAAACCTACCTTCCTCTCTCCCGCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CAA 90 bp TCATCAGTGACAGTACGTCGCAGCTGGGACGTCAGTGTTGCGTCGGAGAATCCAAGTCTTGGAATGTGCTaGCAGGATTCAAAAACTGAA +
Preference number: 5 (lower is better)
Translates to: SSVTVRRSWDVSVASENPSLGMC*QDSKTE
Trigger: TTCAGTTTTTGAATCCTGCAAGCACATTCCAAGACT...TGGATTCTCCGACGCAACACTGACGTCCCAGCTGCGACGTACTGTCACTGATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CAA 90 bp CCACCAGTTCTTCAATTTGTCTGCAAAGGAAATGTAGGTGTTCAGATGTCGGTTATGTGGGCTTCGTCCTaGCTCCTGCTGGAAGCAGCA +
Preference number: 5 (lower is better)
Translates to: PPVLQFVCKGNVGVQMSVMWASS*LLLEAA
Trigger: TGCTGCTTCCAGCAGGAGCAAGGACGAAGCCCACAT...AACCGACATCTGAACACCTACATTTCCTTTGCAGACAAATTGAAGAACTGGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS-3UTR CAA 90 bp CCAGCCCCAGCAGCAGTGCAAGGATGCGGTGTTTCCTGTATATATATCTATATCTTGCCTCTGTCTGGTTaGACTGGCTTCCTGACATTC +
Preference number: 5 (lower is better)
Translates to: PAPAAVQGCGVSCIYIYILPLSG*TGFLTF
Trigger: GAATGTCAGGAAGCCAGTCAAACCAGACAGAGGCAA...GATATAGATATATATACAGGAAACACCGCATCCTTGCACTGCTGCTGGGGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS-3UTR CAA 90 bp CTGCCAGCCCCAGCAGCAGTGCAAGGATGCGGTGTTTCCTGTATATATATCTATTTGGCCACTGAGGTCTaGCTAATATCTTCTAGGGAG +
Preference number: 5 (lower is better)
Translates to: LPAPAAVQGCGVSCIYIYLATEV*LISSRE
Trigger: CTCCCTAGAAGATATTAGCAAGACCTCAGTGGCCAA...ATAGATATATATACAGGAAACACCGCATCCTTGCACTGCTGCTGGGGCTGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS-3UTR CAA 90 bp TATATATATATGCTTTTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGCAGTGCTTCTTGATCTCCTaGGAGGGGTCCAGCCAGTTC +
Preference number: 5 (lower is better)
Translates to: YIYMLFPSQSLISDSTSQCFLIS*EGSSQF
Trigger: GAACTGGCTGGACCCCTCCAAGGAGATCAAGAAGCA...CTGCGACGTACTGTCACTGATGAGAGACTGGGAAGGGAAAAGCATATATATATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp TATATATATATGCTTTTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGCAGATGCCCTCAGAGTCCTaGGCATGGTGCAGGTCTACT +
Preference number: 5 (lower is better)
Translates to: YIYMLFPSQSLISDSTSQMPSES*AWCRST
Trigger: AGTAGACCTGCACCATGCCAAGGACTCTGAGGGCAT...CTGCGACGTACTGTCACTGATGAGAGACTGGGAAGGGAAAAGCATATATATATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp ATATATATGCTTTTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGCAGCTGGACATGGTGTACCGTTaGCTGGAAGAACGCTCAAAG +
Preference number: 5 (lower is better)
Translates to: IYMLFPSQSLISDSTSQLDMVYR*LEERSK
Trigger: CTTTGAGCGTTCTTCCAGCAAACGGTACACCATGTC...CAGCTGCGACGTACTGTCACTGATGAGAGACTGGGAAGGGAAAAGCATATATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp CTTTTCTTTTTCTCATTTCAAAGGAGAGTCATCTGCAGTGGCCCTCAGAAGGACTCCTTCAGGGTCCTTTaGAGCTCATTGATGCTGGCC +
Preference number: 5 (lower is better)
Translates to: LFFFSFQRRVICSGPQKDSFRVL*SSLMLA
Trigger: GGCCAGCATCAATGAGCTCAAAAGGACCCTGAAGGA...GTCCTTCTGAGGGCCACTGCAGATGACTCTCCTTTGAAATGAGAAAAAGAAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp ATCTATATATATATGCTTTTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGTCCCGGTGGATGAGTTaGCTGTTGGGCTCCTTCAGG +
Preference number: 5 (lower is better)
Translates to: IYIYMLFPSQSLISDSTSSRWMS*LLGSFR
Trigger: CCTGAAGGAGCCCAACAGCAAACTCATCCACCGGGA...CGACGTACTGTCACTGATGAGAGACTGGGAAGGGAAAAGCATATATATATAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp TTTCTTTTTCTCATTTCAAAGGAGAGTCATCTGCAGTGGCCCTCAGAAGGACCAGTTCTCTGGCTTGGGTaGGACCAGAAATGCCAGGAT +
Preference number: 5 (lower is better)
Translates to: FLFLISKESHLQWPSEGPVLWLG*DQKCQD
Trigger: ATCCTGGCATTTCTGGTCCAACCCAAGCCAGAGAAC...TGGTCCTTCTGAGGGCCACTGCAGATGACTCTCCTTTGAAATGAGAAAAAGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp GTTTTCCTTTGCATTCAAGTGGGCCTTAGAGATGCTGGAGAAGAACAAATGGAAGCTGGGACGTCAGTGTaGCGTCGGAGAATCCAGAAT +
Preference number: 5 (lower is better)
Translates to: VFLCIQVGLRDAGEEQMEAGTSV*RRRIQN
Trigger: ATTCTGGATTCTCCGACGCAACACTGACGTCCCAGC...TTCCATTTGTTCTTCTCCAGCATCTCTAAGGCCCACTTGAATGCAAAGGAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp CTTTTCTTTTTCTCATTTCAAAGGAGAGTCATCTGCAGTGGCCCTCAGAAGGACGTGTTCAGATGTCGGTaGTTGCTGTCAGCCAACTGC +
Preference number: 5 (lower is better)
Translates to: LFFFSFQRRVICSGPQKDVFRCR*LLSANC
Trigger: GCAGTTGGCTGACAGCAACAACCGACATCTGAACAC...GTCCTTCTGAGGGCCACTGCAGATGACTCTCCTTTGAAATGAGAAAAAGAAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp TTTCTTTTTCTCATTTCAAAGGAGAGTCATCTGCAGTGGCCCTCAGAAGGACCATCATCGTGGTCTGGCTaGCGTTTCTTATTTGGCGGG +
Preference number: 5 (lower is better)
Translates to: FLFLISKESHLQWPSEGPSSWSG*RFLFGG
Trigger: CCCGCCAAATAAGAAACGCAAGCCAGACCACGATGA...TGGTCCTTCTGAGGGCCACTGCAGATGACTCTCCTTTGAAATGAGAAAAAGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp ACTCTCAAGAAGGGCAGGAAGAAGGTTCTGTGGCTTTTCCACCAGGATTGTAGATTTCTCGGAAAATGGTaGACTGTGCGTGTCTTGCTG +
Preference number: 5 (lower is better)
Translates to: TLKKGRKKVLWLFHQDCRFLGKW*TVRVLL
Trigger: CAGCAAGACACGCACAGTCAACCATTTTCCGAGAAA...TCTACAATCCTGGTGGAAAAGCCACAGAACCTTCTTCCTGCCCTTCTTGAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CAA 90 bp CTTTTCTTTTTCTCATTTCAAAGGAGAGTCATCTGCAGTGGCCCTCAGAAGGACTCTAAGAACTCCTGCTaGTGTCTCGGCGTGGTTTCC +
Preference number: 5 (lower is better)
Translates to: LFFFSFQRRVICSGPQKDSKNSC*CLGVVS
Trigger: GGAAACCACGCCGAGACACAAGCAGGAGTTCTTAGA...GTCCTTCTGAGGGCCACTGCAGATGACTCTCCTTTGAAATGAGAAAAAGAAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000636016.2
CDS-3UTR CAA 90 bp TGCTGGAGAAGAACAAATGGAATTGCTCGTCTGCTAACTGTAACGTGCAGAACCTGTGTTGCTTCTTTCTaGCCAAACCCACACCTCTCC +
Preference number: 5 (lower is better)
Translates to: CWRRTNGIARLLTVTCRTCVASF*PNPHLS
Trigger: GGAGAGGTGTGGGTTTGGCAAGAAAGAAGCAACACA...GGTTCTGCACGTTACAGTTAGCAGACGAGCAATTCCATTTGTTCTTCTCCAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CAA 90 bp TCCCACCTTCTTCAGCCTGAGAATAGTCCCTGGCACAAGCAGGTAATCAGTAAAGAGCACCACCTCCCTTaGGATATGGAGTTGGTTATT +
Preference number: 5 (lower is better)
Translates to: SHLLQPENSPWHKQVISKEHHLP*DMELVI
Trigger: AATAACCAACTCCATATCCAAAGGGAGGTGGTGCTC...TTTACTGATTACCTGCTTGTGCCAGGGACTATTCTCAGGCTGAAGAAGGTGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CAA 90 bp CCACCAGTTCTTCAATTTGTCTGCAAAGGAAATGTAGGTGTTCAGATGTCGGTTGCTCAGAGAAGTAGCTaGTGGCAGACAAGCCTGAGG +
Preference number: 5 (lower is better)
Translates to: PPVLQFVCKGNVGVQMSVAQRSS*WQTSLR
Trigger: CCTCAGGCTTGTCTGCCACAAGCTACTTCTCTGAGC...AACCGACATCTGAACACCTACATTTCCTTTGCAGACAAATTGAAGAACTGGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CAA 90 bp AGGTTGAAGACAGACAAGACAAACGTCTCTATTCTCTACAAAGAGAAGGATGGGGCTCAGAGAAGTAGCTaGTGGCAGACAAGCCTGAGG +
Preference number: 5 (lower is better)
Translates to: RLKTDKTNVSILYKEKDGAQRSS*WQTSLR
Trigger: CCTCAGGCTTGTCTGCCACAAGCTACTTCTCTGAGC...CCCATCCTTCTCTTTGTAGAGAATAGAGACGTTTGTCTTGTCTGTCTTCAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CAA 90 bp CCACCATCTTCTACAATGGCTGAGAGCACCACCTCCCTTTGGATATGGAGTTGGTTCTTTCTGCTTATTTaGCAAGTCGGGAAACTGAGG +
Preference number: 5 (lower is better)
Translates to: PPSSTMAESTTSLWIWSWFFLLI*QVGKLR
Trigger: CCTCAGTTTCCCGACTTGCAAAATAAGCAGAAAGAA...CCAACTCCATATCCAAAGGGAGGTGGTGCTCTCAGCCATTGTAGAAGATGGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CAA 90 bp CCTCCTACAAGCTGCACCTTCATAATGAGAAACCATAAGCATACAATGTCTACTGTGTCAGGGTCTGCCTaGCTGGAACCTGTTCCGTCA +
Preference number: 5 (lower is better)
Translates to: PPTSCTFIMRNHKHTMSTVSGSA*LEPVPS
Trigger: TGACGGAACAGGTTCCAGCAAGGCAGACCCTGACAC...AGTAGACATTGTATGCTTATGGTTTCTCATTATGAAGGTGCAGCTTGTAGGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373950.6
CDS-3UTR CAA 90 bp ACTCTCAAGAAGGGCAGGAAGAAGGTTCTGTGGCTTTTCCACCAGGATTGTAGAACTTCCACTTTGAACTaGTCCACCAGAACGTCTACC +
Preference number: 5 (lower is better)
Translates to: TLKKGRKKVLWLFHQDCRTSTLN*STRTST
Trigger: GGTAGACGTTCTGGTGGACAAGTTCAAAGTGGAAGT...TCTACAATCCTGGTGGAAAAGCCACAGAACCTTCTTCCTGCCCTTCTTGAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS-3UTR CAA 90 bp TCGTCTGCTAACTGTAACGTGCAGAACCAGGGCGGGAGGGACTTCTACAATCATTGCAATCATTTTTCCTaGTTGCTGGGTGTTTGCTCT +
Preference number: 5 (lower is better)
Translates to: SSANCNVQNQGGRDFYNHCNHFS*LLGVCS
Trigger: AGAGCAAACACCCAGCAACAAGGAAAAATGATTGCA...ATGATTGTAGAAGTCCCTCCCGCCCTGGTTCTGCACGTTACAGTTAGCAGACGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS-3UTR CAA 90 bp TCATCAGTGACAGTACGTCGCAGCTGGGACGTCAGTGTTGCGTCGGAGAATCCACAAAGTCTTCAGGACTaGCAATCATTTTTCCTTGTT +
Preference number: 5 (lower is better)
Translates to: SSVTVRRSWDVSVASENPQSLQD*QSFFLV
Trigger: AACAAGGAAAAATGATTGCAAGTCCTGAAGACTTTG...TGGATTCTCCGACGCAACACTGACGTCCCAGCTGCGACGTACTGTCACTGATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS-3UTR CAA 90 bp ACCAGTTCTTCAATTTGTCTGCAAAGGAAATGTAGGTGTTCAGATGTCGGTTGTACCACTCCCCTCTCTTaGGGTGGGAAGTTGCCTCTG +
Preference number: 5 (lower is better)
Translates to: TSSSICLQRKCRCSDVGCTTPLS*GGKLPL
Trigger: CAGAGGCAACTTCCCACCCAAAGAGAGGGGAGTGGT...ACAACCGACATCTGAACACCTACATTTCCTTTGCAGACAAATTGAAGAACTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS-3UTR CAA 90 bp TGCTGGAGAAGAACAAATGGAATTGCTCGTCTGCTAACTGTAACGTGCAGAACCCGGCAGATGGCACTCTaGTATTTCTTGGCAATCTTC +
Preference number: 5 (lower is better)
Translates to: CWRRTNGIARLLTVTCRTRQMAL*YFLAIF
Trigger: GAAGATTGCCAAGAAATACAAGAGTGCCATCTGCCG...GGTTCTGCACGTTACAGTTAGCAGACGAGCAATTCCATTTGTTCTTCTCCAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp GCCAGTTCAGTGAGATCTAGGAACCTCAGGATACATCAATCACAGTCAGATAATTCCTTCTCTAGGAGGTaGAGGTGTTCACAGACCAGG +
Preference number: 5 (lower is better)
Translates to: ASSVRSRNLRIHQSQSDNSFSRR*RCSQTR
Trigger: CCTGGTCTGTGAACACCTCAACCTCCTAGAGAAGGA...ATTATCTGACTGTGATTGATGTATCCTGAGGTTCCTAGATCTCACTGAACTGGC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CAA 90 bp ACCAGTTCTTCAATTTGTCTGCAAAGGAAATGTAGGTGTTCAGATGTCGGTTGTTGCTTCTTGATCTCCTaGGAGGGGTCCAGCCAGTTC +
Preference number: 5 (lower is better)
Translates to: TSSSICLQRKCRCSDVGCCFLIS*EGSSQF
Trigger: GAACTGGCTGGACCCCTCCAAGGAGATCAAGAAGCA...ACAACCGACATCTGAACACCTACATTTCCTTTGCAGACAAATTGAAGAACTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp TTTCTTTTTCTCATTTCAAAGGAGAGTCATCTGCAGTGGCCCTCAGAAGGACCAGACATGGTGTACCGTTaGCTGGAAGAACGCTCAAAG +
Preference number: 5 (lower is better)
Translates to: FLFLISKESHLQWPSEGPDMVYR*LEERSK
Trigger: CTTTGAGCGTTCTTCCAGCAAACGGTACACCATGTC...TGGTCCTTCTGAGGGCCACTGCAGATGACTCTCCTTTGAAATGAGAAAAAGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp CATCTTCTACAATGGCTGAGAGCACCACCTCCCTTTGGATATGGAGTTGGTTATTTTAGCTCCTTGATCTaGGTTGGAGTCCTGACCTCT +
Preference number: 5 (lower is better)
Translates to: HLLQWLRAPPPFGYGVGYFSSLI*VGVLTS
Trigger: AGAGGTCAGGACTCCAACCAAGATCAAGGAGCTAAA...ATAACCAACTCCATATCCAAAGGGAGGTGGTGCTCTCAGCCATTGTAGAAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CAA 90 bp CCAGCCCCAGCAGCAGTGCAAGGATGCGGTGTTTCCTGTATATATATCTATATCAAGAACTTTAGCTCCTaGATCTTGGTTGGAGTCCTG +
Preference number: 5 (lower is better)
Translates to: PAPAAVQGCGVSCIYIYIKNFSS*ILVGVL
Trigger: CAGGACTCCAACCAAGATCAAGGAGCTAAAGTTCTT...GATATAGATATATATACAGGAAACACCGCATCCTTGCACTGCTGCTGGGGCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000202028.9
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
CDS-3UTR CAA 90 bp CCCAGCAGCAGTGCAAGGATGCGGTGTTTCCTGTATATATATCTATATCTCTATGTCCTTTTGAGCTCATaGATGCTGGCCTGGTGCTTC +
Preference number: 5 (lower is better)
Translates to: PSSSARMRCFLYIYLYLYVLLSS*MLAWCF
Trigger: GAAGCACCAGGCCAGCATCAATGAGCTCAAAAGGAC...ATAGAGATATAGATATATATACAGGAAACACCGCATCCTTGCACTGCTGCTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp AGGTTGAAGACAGACAAGACAAACGTCTCTATTCTCTACAAAGAGAAGGATGGGTGGATGAGTTTGCTGTaGGGCTCCTTCAGGGTCCTT +
Preference number: 5 (lower is better)
Translates to: RLKTDKTNVSILYKEKDGWMSLL*GSFRVL
Trigger: AAGGACCCTGAAGGAGCCCAACAGCAAACTCATCCA...CCCATCCTTCTCTTTGTAGAGAATAGAGACGTTTGTCTTGTCTGTCTTCAACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CAA 90 bp TCTTCAATTTGTCTGCAAAGGAAATGTAGGTGTTCAGATGTCGGTTGTTGCTGTTCAATGGCCAGGTGGTaGTCCTTCAGGAACACCGTG +
Preference number: 5 (lower is better)
Translates to: SSICLQRKCRCSDVGCCCSMARW*SFRNTV
Trigger: CACGGTGTTCCTGAAGGACAACCACCTGGCCATTGA...ACAGCAACAACCGACATCTGAACACCTACATTTCCTTTGCAGACAAATTGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CAA 90 bp GTTTTCCTTTGCATTCAAGTGGGCCTTAGAGATGCTGGAGAAGAACAAATGGAATCAGGATGCTGCAGTTaGGCCTCCTTGATGGCCAAA +
Preference number: 5 (lower is better)
Translates to: VFLCIQVGLRDAGEEQMESGCCS*ASLMAK
Trigger: TTTGGCCATCAAGGAGGCCAAACTGCAGCATCCTGA...TTCCATTTGTTCTTCTCCAGCATCTCTAAGGCCCACTTGAATGCAAAGGAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp CCCAGCAGCAGTGCAAGGATGCGGTGTTTCCTGTATATATATCTATATCTCTATTCAGGATGCTGCAGTTaGGCCTCCTTGATGGCCAAA +
Preference number: 5 (lower is better)
Translates to: PSSSARMRCFLYIYLYLYSGCCS*ASLMAK
Trigger: TTTGGCCATCAAGGAGGCCAAACTGCAGCATCCTGA...ATAGAGATATAGATATATATACAGGAAACACCGCATCCTTGCACTGCTGCTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp GTTTTCCTTTGCATTCAAGTGGGCCTTAGAGATGCTGGAGAAGAACAAATGGAAGTTCTCTGGCTTGGGTaGGACCAGAAATGCCAGGAT +
Preference number: 5 (lower is better)
Translates to: VFLCIQVGLRDAGEEQMEVLWLG*DQKCQD
Trigger: ATCCTGGCATTTCTGGTCCAACCCAAGCCAGAGAAC...TTCCATTTGTTCTTCTCCAGCATCTCTAAGGCCCACTTGAATGCAAAGGAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp GCATTCAAGTGGGCCTTAGAGATGCTGGAGAAGAACAAATGGAATTGCTCGTCTTTTCTCGGAAAATGGTaGACTGTGCGTGTCTTGCTG +
Preference number: 5 (lower is better)
Translates to: AFKWALEMLEKNKWNCSSFLGKW*TVRVLL
Trigger: CAGCAAGACACGCACAGTCAACCATTTTCCGAGAAA...AGACGAGCAATTCCATTTGTTCTTCTCCAGCATCTCTAAGGCCCACTTGAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp GCCAGTTCAGTGAGATCTAGGAACCTCAGGATACATCAATCACAGTCAGATAATCAGGGAGAAGGTGTCTaGAACTGGCATTTTGGGGAC +
Preference number: 5 (lower is better)
Translates to: ASSVRSRNLRIHQSQSDNQGEGV*NWHFGD
Trigger: GTCCCCAAAATGCCAGTTCAAGACACCTTCTCCCTG...ATTATCTGACTGTGATTGATGTATCCTGAGGTTCCTAGATCTCACTGAACTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CAA 90 bp ATATATATGCTTTTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGCAGCTGATGGGCCAGCCATGGTaGAAATATAAAGCTGGCTCA +
Preference number: 5 (lower is better)
Translates to: IYMLFPSQSLISDSTSQLMGQPW*KYKAGS
Trigger: TGAGCCAGCTTTATATTTCAACCATGGCTGGCCCAT...CAGCTGCGACGTACTGTCACTGATGAGAGACTGGGAAGGGAAAAGCATATATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CAA 90 bp AAATGTAGGTGTTCAGATGTCGGTTGTTGCTGTCAGCCAACTGCTCTGCCAGCCAGTCTTGGAATGTGCTaGCAGGATTCAAAAACTGAA +
Preference number: 5 (lower is better)
Translates to: KCRCSDVGCCCQPTALPASLGMC*QDSKTE
Trigger: TTCAGTTTTTGAATCCTGCAAGCACATTCCAAGACT...GGCTGGCAGAGCAGTTGGCTGACAGCAACAACCGACATCTGAACACCTACATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CAA 90 bp TCCCACCTTCTTCAGCCTGAGAATAGTCCCTGGCACAAGCAGGTAATCAGTAAATTATTTCGAGTGATGTaGCTCATGCAGTTTCAGGCC +
Preference number: 5 (lower is better)
Translates to: SHLLQPENSPWHKQVISKLFRVM*LMQFQA
Trigger: GGCCTGAAACTGCATGAGCAACATCACTCGAAATAA...TTTACTGATTACCTGCTTGTGCCAGGGACTATTCTCAGGCTGAAGAAGGTGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CAA 90 bp CTTTTCTTTTTCTCATTTCAAAGGAGAGTCATCTGCAGTGGCCCTCAGAAGGACCATCTCCCCACACATTaGCCCAAATGTCAGGGAAAG +
Preference number: 5 (lower is better)
Translates to: LFFFSFQRRVICSGPQKDHLPTH*PKCQGK
Trigger: CTTTCCCTGACATTTGGGCAAATGTGTGGGGAGATG...GTCCTTCTGAGGGCCACTGCAGATGACTCTCCTTTGAAATGAGAAAAAGAAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373946.7
CDS-3UTR CAA 90 bp TTTCTTTTTCTCATTTCAAAGGAGAGTCATCTGCAGTGGCCCTCAGAAGGACCAGCACTCTTGTATTTCTaGGCAATCTTCTGGGGCGAT +
Preference number: 5 (lower is better)
Translates to: FLFLISKESHLQWPSEGPALLYF*AIFWGD
Trigger: ATCGCCCCAGAAGATTGCCAAGAAATACAAGAGTGC...TGGTCCTTCTGAGGGCCACTGCAGATGACTCTCCTTTGAAATGAGAAAAAGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp TCTTCAATTTGTCTGCAAAGGAAATGTAGGTGTTCAGATGTCGGTTGTTGCTGTGTCCTTTTGAGCTCATaGATGCTGGCCTGGTGCTTC +
Preference number: 5 (lower is better)
Translates to: SSICLQRKCRCSDVGCCCVLLSS*MLAWCF
Trigger: GAAGCACCAGGCCAGCATCAATGAGCTCAAAAGGAC...ACAGCAACAACCGACATCTGAACACCTACATTTCCTTTGCAGACAAATTGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp CCTCCTACAAGCTGCACCTTCATAATGAGAAACCATAAGCATACAATGTCTACTTCCTTCAGGGTCCTTTaGAGCTCATTGATGCTGGCC +
Preference number: 5 (lower is better)
Translates to: PPTSCTFIMRNHKHTMSTSFRVL*SSLMLA
Trigger: GGCCAGCATCAATGAGCTCAAAAGGACCCTGAAGGA...AGTAGACATTGTATGCTTATGGTTTCTCATTATGAAGGTGCAGCTTGTAGGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp TCTTCAATTTGTCTGCAAAGGAAATGTAGGTGTTCAGATGTCGGTTGTTGCTGTCCTCCTTTCACAGTTTaGGTGACATGGGTGGTGGTG +
Preference number: 5 (lower is better)
Translates to: SSICLQRKCRCSDVGCCCPPFTV*VTWVVV
Trigger: CACCACCACCCATGTCACCAAAACTGTGAAAGGAGG...ACAGCAACAACCGACATCTGAACACCTACATTTCCTTTGCAGACAAATTGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp CCTCCTACAAGCTGCACCTTCATAATGAGAAACCATAAGCATACAATGTCTACTCCTCCTTTCACAGTTTaGGTGACATGGGTGGTGGTG +
Preference number: 5 (lower is better)
Translates to: PPTSCTFIMRNHKHTMSTPPFTV*VTWVVV
Trigger: CACCACCACCCATGTCACCAAAACTGTGAAAGGAGG...AGTAGACATTGTATGCTTATGGTTTCTCATTATGAAGGTGCAGCTTGTAGGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp ACCAGTTCTTCAATTTGTCTGCAAAGGAAATGTAGGTGTTCAGATGTCGGTTGTCCTCCTTTCACAGTTTaGGTGACATGGGTGGTGGTG +
Preference number: 5 (lower is better)
Translates to: TSSSICLQRKCRCSDVGCPPFTV*VTWVVV
Trigger: CACCACCACCCATGTCACCAAAACTGTGAAAGGAGG...ACAACCGACATCTGAACACCTACATTTCCTTTGCAGACAAATTGAAGAACTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp CTTTTCTTTTTCTCATTTCAAAGGAGAGTCATCTGCAGTGGCCCTCAGAAGGACTTCGCTTCTCGATCCTaGTCTCAGAAAACCCTCCTT +
Preference number: 5 (lower is better)
Translates to: LFFFSFQRRVICSGPQKDFASRS*SQKTLL
Trigger: AAGGAGGGTTTTCTGAGACAAGGATCGAGAAGCGAA...GTCCTTCTGAGGGCCACTGCAGATGACTCTCCTTTGAAATGAGAAAAAGAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp CCTCCTACAAGCTGCACCTTCATAATGAGAAACCATAAGCATACAATGTCTACTTCAGGATGCTGCAGTTaGGCCTCCTTGATGGCCAAA +
Preference number: 5 (lower is better)
Translates to: PPTSCTFIMRNHKHTMSTSGCCS*ASLMAK
Trigger: TTTGGCCATCAAGGAGGCCAAACTGCAGCATCCTGA...AGTAGACATTGTATGCTTATGGTTTCTCATTATGAAGGTGCAGCTTGTAGGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp GCATTCAAGTGGGCCTTAGAGATGCTGGAGAAGAACAAATGGAATTGCTCGTCTCTGTATACGACAGCTTaGGTTACCAGCATATCAGGA +
Preference number: 5 (lower is better)
Translates to: AFKWALEMLEKNKWNCSSLYTTA*VTSISG
Trigger: TCCTGATATGCTGGTAACCAAAGCTGTCGTATACAG...AGACGAGCAATTCCATTTGTTCTTCTCCAGCATCTCTAAGGCCCACTTGAATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp GTTTTCCTTTGCATTCAAGTGGGCCTTAGAGATGCTGGAGAAGAACAAATGGAATTCAGATGTCGGTTGTaGCTGTCAGCCAACTGCTCT +
Preference number: 5 (lower is better)
Translates to: VFLCIQVGLRDAGEEQMEFRCRL*LSANCS
Trigger: AGAGCAGTTGGCTGACAGCAACAACCGACATCTGAA...TTCCATTTGTTCTTCTCCAGCATCTCTAAGGCCCACTTGAATGCAAAGGAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp AGGTTGAAGACAGACAAGACAAACGTCTCTATTCTCTACAAAGAGAAGGATGGGTTCAGATGTCGGTTGTaGCTGTCAGCCAACTGCTCT +
Preference number: 5 (lower is better)
Translates to: RLKTDKTNVSILYKEKDGFRCRL*LSANCS
Trigger: AGAGCAGTTGGCTGACAGCAACAACCGACATCTGAA...CCCATCCTTCTCTTTGTAGAGAATAGAGACGTTTGTCTTGTCTGTCTTCAACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CAA 90 bp CTTTTCTTTTTCTCATTTCAAAGGAGAGTCATCTGCAGTGGCCCTCAGAAGGACGAGCACCACCTCCCTTaGGATATGGAGTTGGTTATT +
Preference number: 5 (lower is better)
Translates to: LFFFSFQRRVICSGPQKDEHHLP*DMELVI
Trigger: AATAACCAACTCCATATCCAAAGGGAGGTGGTGCTC...GTCCTTCTGAGGGCCACTGCAGATGACTCTCCTTTGAAATGAGAAAAAGAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CAA 90 bp CTTTTCTTTTTCTCATTTCAAAGGAGAGTCATCTGCAGTGGCCCTCAGAAGGACATGGGCCAGCCATGGTaGAAATATAAAGCTGGCTCA +
Preference number: 5 (lower is better)
Translates to: LFFFSFQRRVICSGPQKDMGQPW*KYKAGS
Trigger: TGAGCCAGCTTTATATTTCAACCATGGCTGGCCCAT...GTCCTTCTGAGGGCCACTGCAGATGACTCTCCTTTGAAATGAGAAAAAGAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CAA 90 bp CTGCCAGCCCCAGCAGCAGTGCAAGGATGCGGTGTTTCCTGTATATATATCTATAGTCTTGGAATGTGCTaGCAGGATTCAAAAACTGAA +
Preference number: 5 (lower is better)
Translates to: LPAPAAVQGCGVSCIYIYSLGMC*QDSKTE
Trigger: TTCAGTTTTTGAATCCTGCAAGCACATTCCAAGACT...ATAGATATATATACAGGAAACACCGCATCCTTGCACTGCTGCTGGGGCTGGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CAA 90 bp TGCTGGAGAAGAACAAATGGAATTGCTCGTCTGCTAACTGTAACGTGCAGAACCAGGACAGCATCGCAATaGGTTGTTAAGGTGCTTTTG +
Preference number: 5 (lower is better)
Translates to: CWRRTNGIARLLTVTCRTRTASQ*VVKVLL
Trigger: CAAAAGCACCTTAACAACCAATTGCGATGCTGTCCT...GGTTCTGCACGTTACAGTTAGCAGACGAGCAATTCCATTTGTTCTTCTCCAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CAA 90 bp TTTCTTTTTCTCATTTCAAAGGAGAGTCATCTGCAGTGGCCCTCAGAAGGACCACTGAAGATACGTCATTaGGAAGGGACCTTGCTTCAC +
Preference number: 5 (lower is better)
Translates to: FLFLISKESHLQWPSEGPLKIRH*EGTLLH
Trigger: GTGAAGCAAGGTCCCTTCCAAATGACGTATCTTCAG...TGGTCCTTCTGAGGGCCACTGCAGATGACTCTCCTTTGAAATGAGAAAAAGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS-3UTR CAA 90 bp ATATATATGCTTTTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGCAGCTGGAAGTATCAGTTTCATaGCTCAACTCAGCTCTGGCT +
Preference number: 5 (lower is better)
Translates to: IYMLFPSQSLISDSTSQLEVSVS*LNSALA
Trigger: AGCCAGAGCTGAGTTGAGCAATGAAACTGATACTTC...CAGCTGCGACGTACTGTCACTGATGAGAGACTGGGAAGGGAAAAGCATATATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS CCA 90 bp ACTGACTCAAAGTCTTCAGGACTTGCAATCATTTTTCCTTGTTGCTaGGTGTTTGCTCTTCTGTTTCCCACCATTTCTTCTGTGGCCACT +
Preference number: 5 (lower is better)
Translates to: TDSKSSGLAIIFPCC*VFALLFPTISSVAT
Trigger: AGTGGCCACAGAAGAAATGGTGGGAAACAGAAGAGCAAACACCCAGCAACAAGGAAAAATGATTGCAAGTCCTGAAGACTTTGAGTCAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS-3UTR CAA 90 bp TATATATATATGCTTTTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGCAGCGGCAGATGGCACTCTaGTATTTCTTGGCAATCTTC +
Preference number: 5 (lower is better)
Translates to: YIYMLFPSQSLISDSTSQRQMAL*YFLAIF
Trigger: GAAGATTGCCAAGAAATACAAGAGTGCCATCTGCCG...CTGCGACGTACTGTCACTGATGAGAGACTGGGAAGGGAAAAGCATATATATATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp AGGTTGAAGACAGACAAGACAAACGTCTCTATTCTCTACAAAGAGAAGGATGGGTTTAGCTCCTTGATCTaGGTTGGAGTCCTGACCTCT +
Preference number: 5 (lower is better)
Translates to: RLKTDKTNVSILYKEKDGFSSLI*VGVLTS
Trigger: AGAGGTCAGGACTCCAACCAAGATCAAGGAGCTAAA...CCCATCCTTCTCTTTGTAGAGAATAGAGACGTTTGTCTTGTCTGTCTTCAACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CAA 90 bp TATATATATATGCTTTTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGCAGTTTAGCTCCTTGATCTaGGTTGGAGTCCTGACCTCT +
Preference number: 5 (lower is better)
Translates to: YIYMLFPSQSLISDSTSQFSSLI*VGVLTS
Trigger: AGAGGTCAGGACTCCAACCAAGATCAAGGAGCTAAA...CTGCGACGTACTGTCACTGATGAGAGACTGGGAAGGGAAAAGCATATATATATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp CCCAGCAGCAGTGCAAGGATGCGGTGTTTCCTGTATATATATCTATATCTCTATTTCGCTTCTCGATCCTaGTCTCAGAAAACCCTCCTT +
Preference number: 5 (lower is better)
Translates to: PSSSARMRCFLYIYLYLYFASRS*SQKTLL
Trigger: AAGGAGGGTTTTCTGAGACAAGGATCGAGAAGCGAA...ATAGAGATATAGATATATATACAGGAAACACCGCATCCTTGCACTGCTGCTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp ATCTATATATATATGCTTTTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGTTCAGATGTCGGTTGTaGCTGTCAGCCAACTGCTCT +
Preference number: 5 (lower is better)
Translates to: IYIYMLFPSQSLISDSTSFRCRL*LSANCS
Trigger: AGAGCAGTTGGCTGACAGCAACAACCGACATCTGAA...CGACGTACTGTCACTGATGAGAGACTGGGAAGGGAAAAGCATATATATATAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp CCACCAGTTCTTCAATTTGTCTGCAAAGGAAATGTAGGTGTTCAGATGTCGGTTTTTCTCGGAAAATGGTaGACTGTGCGTGTCTTGCTG +
Preference number: 5 (lower is better)
Translates to: PPVLQFVCKGNVGVQMSVFLGKW*TVRVLL
Trigger: CAGCAAGACACGCACAGTCAACCATTTTCCGAGAAA...AACCGACATCTGAACACCTACATTTCCTTTGCAGACAAATTGAAGAACTGGTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp TATATATATATGCTTTTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGCAGTTTCTCGGAAAATGGTaGACTGTGCGTGTCTTGCTG +
Preference number: 5 (lower is better)
Translates to: YIYMLFPSQSLISDSTSQFLGKW*TVRVLL
Trigger: CAGCAAGACACGCACAGTCAACCATTTTCCGAGAAA...CTGCGACGTACTGTCACTGATGAGAGACTGGGAAGGGAAAAGCATATATATATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp CCTCCTACAAGCTGCACCTTCATAATGAGAAACCATAAGCATACAATGTCTACTTGTGATGGGAGCTTCTaGAAGGGTTCCTGTGGTCTT +
Preference number: 5 (lower is better)
Translates to: PPTSCTFIMRNHKHTMSTCDGSF*KGSCGL
Trigger: AAGACCACAGGAACCCTTCAAGAAGCTCCCATCACA...AGTAGACATTGTATGCTTATGGTTTCTCATTATGAAGGTGCAGCTTGTAGGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CAA 90 bp TCTTCAATTTGTCTGCAAAGGAAATGTAGGTGTTCAGATGTCGGTTGTTGCTGTTGTGATGGGAGCTTCTaGAAGGGTTCCTGTGGTCTT +
Preference number: 5 (lower is better)
Translates to: SSICLQRKCRCSDVGCCCCDGSF*KGSCGL
Trigger: AAGACCACAGGAACCCTTCAAGAAGCTCCCATCACA...ACAGCAACAACCGACATCTGAACACCTACATTTCCTTTGCAGACAAATTGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CAA 90 bp CTTTTCTTTTTCTCATTTCAAAGGAGAGTCATCTGCAGTGGCCCTCAGAAGGACAGGACAGCATCGCAATaGGTTGTTAAGGTGCTTTTG +
Preference number: 5 (lower is better)
Translates to: LFFFSFQRRVICSGPQKDRTASQ*VVKVLL
Trigger: CAAAAGCACCTTAACAACCAATTGCGATGCTGTCCT...GTCCTTCTGAGGGCCACTGCAGATGACTCTCCTTTGAAATGAGAAAAAGAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS GCA 90 bp AATTTAAATAGAAGCTCCTCTCTGCAAAGGAAGTATCAGTTTCATTaGTCAACTCAGCTCTGGCTTCTGCGTGGGCTGGATCCAATAGAA +
Preference number: 5 (lower is better)
Translates to: NLNRSSSLQRKYQFH*STQLWLLRGLDPIE
Trigger: TTCTATTGGATCCAGCCCACGCAGAAGCCAGAGCTGAGTTGAGCAATGAAACTGATACTTCCTTTGCAGAGAGGAGCTTCTATTTAAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS-3UTR CAA 90 bp ATCTATATATATATGCTTTTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGGCACTCTTGTATTTCTaGGCAATCTTCTGGGGCGAT +
Preference number: 5 (lower is better)
Translates to: IYIYMLFPSQSLISDSTSALLYF*AIFWGD
Trigger: ATCGCCCCAGAAGATTGCCAAGAAATACAAGAGTGC...CGACGTACTGTCACTGATGAGAGACTGGGAAGGGAAAAGCATATATATATAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp GTTTTCCTTTGCATTCAAGTGGGCCTTAGAGATGCTGGAGAAGAACAAATGGAAAAGAACTTTAGCTCCTaGATCTTGGTTGGAGTCCTG +
Preference number: 5 (lower is better)
Translates to: VFLCIQVGLRDAGEEQMEKNFSS*ILVGVL
Trigger: CAGGACTCCAACCAAGATCAAGGAGCTAAAGTTCTT...TTCCATTTGTTCTTCTCCAGCATCTCTAAGGCCCACTTGAATGCAAAGGAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000202028.9
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
CDS-3UTR CAA 90 bp TCTTCAATTTGTCTGCAAAGGAAATGTAGGTGTTCAGATGTCGGTTGTTGCTGTTTCGCTTCTCGATCCTaGTCTCAGAAAACCCTCCTT +
Preference number: 5 (lower is better)
Translates to: SSICLQRKCRCSDVGCCCFASRS*SQKTLL
Trigger: AAGGAGGGTTTTCTGAGACAAGGATCGAGAAGCGAA...ACAGCAACAACCGACATCTGAACACCTACATTTCCTTTGCAGACAAATTGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp CCACCAGTTCTTCAATTTGTCTGCAAAGGAAATGTAGGTGTTCAGATGTCGGTTCTGTATACGACAGCTTaGGTTACCAGCATATCAGGA +
Preference number: 5 (lower is better)
Translates to: PPVLQFVCKGNVGVQMSVLYTTA*VTSISG
Trigger: TCCTGATATGCTGGTAACCAAAGCTGTCGTATACAG...AACCGACATCTGAACACCTACATTTCCTTTGCAGACAAATTGAAGAACTGGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp GTTTTCCTTTGCATTCAAGTGGGCCTTAGAGATGCTGGAGAAGAACAAATGGAACTGTATACGACAGCTTaGGTTACCAGCATATCAGGA +
Preference number: 5 (lower is better)
Translates to: VFLCIQVGLRDAGEEQMELYTTA*VTSISG
Trigger: TCCTGATATGCTGGTAACCAAAGCTGTCGTATACAG...TTCCATTTGTTCTTCTCCAGCATCTCTAAGGCCCACTTGAATGCAAAGGAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp ACCAGTTCTTCAATTTGTCTGCAAAGGAAATGTAGGTGTTCAGATGTCGGTTGTTTTCTCGGAAAATGGTaGACTGTGCGTGTCTTGCTG +
Preference number: 5 (lower is better)
Translates to: TSSSICLQRKCRCSDVGCFLGKW*TVRVLL
Trigger: CAGCAAGACACGCACAGTCAACCATTTTCCGAGAAA...ACAACCGACATCTGAACACCTACATTTCCTTTGCAGACAAATTGAAGAACTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS-3UTR CAA 90 bp CTTTTCTTTTTCTCATTTCAAAGGAGAGTCATCTGCAGTGGCCCTCAGAAGGACCCTTTGGATATGGAGTaGGTTATTACAATGGGGTCA +
Preference number: 5 (lower is better)
Translates to: LFFFSFQRRVICSGPQKDPLDME*VITMGS
Trigger: TGACCCCATTGTAATAACCAACTCCATATCCAAAGG...GTCCTTCTGAGGGCCACTGCAGATGACTCTCCTTTGAAATGAGAAAAAGAAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CAA 90 bp TCTTCAATTTGTCTGCAAAGGAAATGTAGGTGTTCAGATGTCGGTTGTTGCTGTAGTTTCAGGCCAGTCTaGGAATGTGCTTGCAGGATT +
Preference number: 5 (lower is better)
Translates to: SSICLQRKCRCSDVGCCCSFRPV*ECACRI
Trigger: AATCCTGCAAGCACATTCCAAGACTGGCCTGAAACT...ACAGCAACAACCGACATCTGAACACCTACATTTCCTTTGCAGACAAATTGAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CAA 90 bp CCTTACCATGGCTACTTTGGCCTGAGAAGAAGAAATGATTCAGAACAAGGAAGAAGGACAGCATCGCAATaGGTTGTTAAGGTGCTTTTG +
Preference number: 5 (lower is better)
Translates to: PYHGYFGLRRRNDSEQGRRTASQ*VVKVLL
Trigger: CAAAAGCACCTTAACAACCAATTGCGATGCTGTCCT...TCTTCCTTGTTCTGAATCATTTCTTCTTCTCAGGCCAAAGTAGCCATGGTAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CAA 90 bp CCACCAGTTCTTCAATTTGTCTGCAAAGGAAATGTAGGTGTTCAGATGTCGGTTCCTTTGGATATGGAGTaGGTTATTACAATGGGGTCA +
Preference number: 5 (lower is better)
Translates to: PPVLQFVCKGNVGVQMSVPLDME*VITMGS
Trigger: TGACCCCATTGTAATAACCAACTCCATATCCAAAGG...AACCGACATCTGAACACCTACATTTCCTTTGCAGACAAATTGAAGAACTGGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CAA 90 bp CCTCCTACAAGCTGCACCTTCATAATGAGAAACCATAAGCATACAATGTCTACTTTTGCAAATGCAGTTTaGATCTTTCAGGGTCTGCCC +
Preference number: 5 (lower is better)
Translates to: PPTSCTFIMRNHKHTMSTFANAV*IFQGLP
Trigger: GGGCAGACCCTGAAAGATCAAAACTGCATTTGCAAA...AGTAGACATTGTATGCTTATGGTTTCTCATTATGAAGGTGCAGCTTGTAGGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CAA 90 bp GTTTTCCTTTGCATTCAAGTGGGCCTTAGAGATGCTGGAGAAGAACAAATGGAATTCTTTCTGCTTATTTaGCAAGTCGGGAAACTGAGG +
Preference number: 5 (lower is better)
Translates to: VFLCIQVGLRDAGEEQMEFFLLI*QVGKLR
Trigger: CCTCAGTTTCCCGACTTGCAAAATAAGCAGAAAGAA...TTCCATTTGTTCTTCTCCAGCATCTCTAAGGCCCACTTGAATGCAAAGGAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CAA 90 bp TCTTCAATTTGTCTGCAAAGGAAATGTAGGTGTTCAGATGTCGGTTGTTGCTGTTTCTTTCTGCTTATTTaGCAAGTCGGGAAACTGAGG +
Preference number: 5 (lower is better)
Translates to: SSICLQRKCRCSDVGCCCFFLLI*QVGKLR
Trigger: CCTCAGTTTCCCGACTTGCAAAATAAGCAGAAAGAA...ACAGCAACAACCGACATCTGAACACCTACATTTCCTTTGCAGACAAATTGAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CAA 90 bp CCTTACCATGGCTACTTTGGCCTGAGAAGAAGAAATGATTCAGAACAAGGAAGAAGTCTTGGAATGTGCTaGCAGGATTCAAAAACTGAA +
Preference number: 5 (lower is better)
Translates to: PYHGYFGLRRRNDSEQGRSLGMC*QDSKTE
Trigger: TTCAGTTTTTGAATCCTGCAAGCACATTCCAAGACT...TCTTCCTTGTTCTGAATCATTTCTTCTTCTCAGGCCAAAGTAGCCATGGTAAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373946.7
ENST00000441639.5
ENST00000636016.2
CDS-3UTR CAA 90 bp ATCTATATATATATGCTTTTCCCTTCCCAGTCTCTCATCAGTGACAGTACGTCGTCAAATATCCGAATTTaGTTGGCCACTGAGGTCTTG +
Preference number: 5 (lower is better)
Translates to: IYIYMLFPSQSLISDSTSSNIRI*LATEVL
Trigger: CAAGACCTCAGTGGCCAACAAAATTCGGATATTTGA...CGACGTACTGTCACTGATGAGAGACTGGGAAGGGAAAAGCATATATATATAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS GCA 72 bp CTTCTCATTGGAGTTGGCCTCTGGGTGGCCGTGGCCTaGAGGGGTCACAGGGGTGGTCACAGCGGCAGCAGC +
Preference number: 6 (lower is better)
Translates to: LLIGVGLWVAVA*RGHRGGHSGSS
Trigger: GCTGCTGCCGCTGTGACCACCCCTGTGACCCCTGCAGGCCACGGCCACCCAGAGGCCAACTCCAATGAGAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338074.7
ENST00000373941.5
ENST00000373946.7
ENST00000406771.6
ENST00000427533.2
ENST00000447825.5
ENST00000452261.5
ENST00000636016.2
CDS CCA 72 bp AAGAAGGGTGCAGGCCGGTCAATGAGGGCGCTGGCCTaGCGAGTCTGTGCCTGGGTCCTCCCACTGTACCGG +
Preference number: 6 (lower is better)
Translates to: KKGAGRSMRALA*RVCAWVLPLYR
Trigger: CCGGTACAGTGGGAGGACCCAGGCACAGACTCGCCAGGCCAGCGCCCTCATTGACCGGCCTGCACCCTTCTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373941.5
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS CCA 72 bp CAGGCCGCGTGTCCTGCTGGGATGGATGCTTCTCATTaGAGTTGGCCTCTGGGTGGCCGTGGCCTGCAGGGG +
Preference number: 6 (lower is better)
Translates to: QAACPAGMDASH*SWPLGGRGLQG
Trigger: CCCCTGCAGGCCACGGCCACCCAGAGGCCAACTCCAATGAGAAGCATCCATCCCAGCAGGACACGCGGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000338074.7
ENST00000373941.5
ENST00000373946.7
ENST00000406771.6
ENST00000427533.2
ENST00000447825.5
ENST00000452261.5
ENST00000636016.2
CDS CCA 72 bp CTCCACTCACGGGGGTCCCTTCCTCTCGGGCTGCGCTaGCTGTCAGGTGGGGAAACTCTCCTTCCACTCCCC +
Preference number: 6 (lower is better)
Translates to: LHSRGSLPLGLR*LSGGETLLPLP
Trigger: GGGGAGTGGAAGGAGAGTTTCCCCACCTGACAGCCAGCGCAGCCCGAGAGGAAGGGACCCCCGTGAGTGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS CAA 90 bp TCAGCAGGCCGCGTGTCCTGCTGGGATGGATGCTTCTCATTGGAGTaGGCCTCTGGGTGGCCGTGGCCTGCAGGGGTCACAGGGGTGGTC +
Preference number: 6 (lower is better)
Translates to: SAGRVSCWDGCFSLE*ASGWPWPAGVTGVV
Trigger: GACCACCCCTGTGACCCCTGCAGGCCACGGCCACCCAGAGGCCAACTCCAATGAGAAGCATCCATCCCAGCAGGACACGCGGCCTGCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338074.7
ENST00000373941.5
ENST00000373946.7
ENST00000406771.6
ENST00000427533.2
ENST00000447825.5
ENST00000452261.5
ENST00000636016.2
CDS GCA 72 bp CTCGCCATCCTCATCCCGCTTGTCACCGTCAGGCCCTaGATCATGGTTCTCGCTGACCGAGGCTGGGCGGGA +
Preference number: 6 (lower is better)
Translates to: LAILIPLVTVRP*IMVLADRGWAG
Trigger: TCCCGCCCAGCCTCGGTCAGCGAGAACCATGATGCAGGGCCTGACGGTGACAAGCGGGATGAGGATGGCGAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373941.5
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000451082.5
ENST00000628415.2
ENST00000636016.2
CDS CAA 72 bp CGAGTCTGTGCCTGGGTCCTCCCACTGTACCGGAACTaGGAGCCCATCACCAGGAAGCCCTTGGGTGGGGGC +
Preference number: 6 (lower is better)
Translates to: RVCAWVLPLYRN*EPITRKPLGGG
Trigger: GCCCCCACCCAAGGGCTTCCTGGTGATGGGCTCCAAGTTCCGGTACAGTGGGAGGACCCAGGCACAGACTCG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373941.5
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS CAA 72 bp CGGGAGAACAGCAGGCCCTCAGTGTCCGAGTCGCTTTaGTCCCGGTCGAGCTCAGGCAGGCTGCGGGAGAAG +
Preference number: 6 (lower is better)
Translates to: RENSRPSVSESL*SRSSSGRLREK
Trigger: CTTCTCCCGCAGCCTGCCTGAGCTCGACCGGGACAAAAGCGACTCGGACACTGAGGGCCTGCTGTTCTCCCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373941.5
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000479336.1
ENST00000636016.2
CDS CCA 72 bp GTCAGGCCCTGCATCATGGTTCTCGCTGACCGAGGCTaGGCGGGAGAACTCTGCTCCATCAAGGCTGCGGGA +
Preference number: 6 (lower is better)
Translates to: VRPCIMVLADRG*AGELCSIKAAG
Trigger: TCCCGCAGCCTTGATGGAGCAGAGTTCTCCCGCCCAGCCTCGGTCAGCGAGAACCATGATGCAGGGCCTGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373941.5
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000451082.5
ENST00000628415.2
ENST00000636016.2
CDS CCA 72 bp CGGAGAAAGAGAACGGATTTCCGTGGCCACCGTCTGTaGGCCTGGGATCATGGCAGCTGCCCCCTTCCCGGA +
Preference number: 6 (lower is better)
Translates to: RRKRTDFRGHRL*AWDHGSCPLPG
Trigger: TCCGGGAAGGGGGCAGCTGCCATGATCCCAGGCCCACAGACGGTGGCCACGGAAATCCGTTCTCTTTCTCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373941.5
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000451082.5
ENST00000454226.5
ENST00000628415.2
ENST00000636016.2
CDS CCA 72 bp CTGCTGGGATGGATGCTTCTCATTGGAGTTGGCCTCTaGGTGGCCGTGGCCTGCAGGGGTCACAGGGGTGGT +
Preference number: 6 (lower is better)
Translates to: LLGWMLLIGVGL*VAVACRGHRGG
Trigger: ACCACCCCTGTGACCCCTGCAGGCCACGGCCACCCAGAGGCCAACTCCAATGAGAAGCATCCATCCCAGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000338074.7
ENST00000373941.5
ENST00000373946.7
ENST00000406771.6
ENST00000427533.2
ENST00000447825.5
ENST00000452261.5
ENST00000636016.2
CDS CCA 72 bp GCGTGTCCTGCTGGGATGGATGCTTCTCATTGGAGTTaGCCTCTGGGTGGCCGTGGCCTGCAGGGGTCACAG +
Preference number: 6 (lower is better)
Translates to: ACPAGMDASHWS*PLGGRGLQGSQ
Trigger: CTGTGACCCCTGCAGGCCACGGCCACCCAGAGGCCAACTCCAATGAGAAGCATCCATCCCAGCAGGACACGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338074.7
ENST00000373941.5
ENST00000373946.7
ENST00000406771.6
ENST00000427533.2
ENST00000447825.5
ENST00000452261.5
ENST00000636016.2
CDS CCA 72 bp TGGAGAGAGGACGTCCACCTCTGCTGGCCTGGTCCCTaGAGCAGTGGGTCTCCCACAAGTGTGAGGCTCCTC +
Preference number: 6 (lower is better)
Translates to: WREDVHLCWPGP*SSGSPTSVRLL
Trigger: GAGGAGCCTCACACTTGTGGGAGACCCACTGCTCCAGGGACCAGGCCAGCAGAGGTGGACGTCCTCTCTCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS CCA 72 bp CAGAAACCCTCAGGTCTAAGGAATTCAGCGTCGGCCTaGGCTCACCTCCGGGAGGGGCATCCAGGCGCCCTT +
Preference number: 6 (lower is better)
Translates to: QKPSGLRNSASA*AHLREGHPGAL
Trigger: AAGGGCGCCTGGATGCCCCTCCCGGAGGTGAGCCCAGGCCGACGCTGAATTCCTTAGACCTGAGGGTTTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS CAA 72 bp CGCGTGTCCTGCTGGGATGGATGCTTCTCATTGGAGTaGGCCTCTGGGTGGCCGTGGCCTGCAGGGGTCACA +
Preference number: 6 (lower is better)
Translates to: RVSCWDGCFSLE*ASGWPWPAGVT
Trigger: TGTGACCCCTGCAGGCCACGGCCACCCAGAGGCCAACTCCAATGAGAAGCATCCATCCCAGCAGGACACGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000338074.7
ENST00000373941.5
ENST00000373946.7
ENST00000406771.6
ENST00000427533.2
ENST00000447825.5
ENST00000452261.5
ENST00000636016.2
CDS GCA 72 bp CCGAGTCGCTTTTGTCCCGGTCGAGCTCAGGCAGGCTaGGGGAGAAGTCTTCGAAGGCGCTGCCATGGTAGT +
Preference number: 6 (lower is better)
Translates to: PSRFCPGRAQAG*GRSLRRRCHGS
Trigger: ACTACCATGGCAGCGCCTTCGAAGACTTCTCCCGCAGCCTGCCTGAGCTCGACCGGGACAAAAGCGACTCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373941.5
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000479336.1
ENST00000636016.2
CDS GCA 72 bp TGGGCGAAGCCCAGGTCTGAGAGCGTACTCCGCTGCTaGTCTGCTTGTCCCACGGGTGCCTCTGAAGATACG +
Preference number: 6 (lower is better)
Translates to: WAKPRSESVLRC*SACPTGASEDT
Trigger: CGTATCTTCAGAGGCACCCGTGGGACAAGCAGAGCAGCAGCGGAGTACGCTCTCAGACCTGGGCTTCGCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479336.1
ENST00000636016.2
CDS CCA 72 bp CCGGAACTTGGAGCCCATCACCAGGAAGCCCTTGGGTaGGGGCTCAGGGGACACCAGCCGGAAGAATGTATG +
Preference number: 6 (lower is better)
Translates to: PELGAHHQEALG*GLRGHQPEECM
Trigger: CATACATTCTTCCGGCTGGTGTCCCCTGAGCCCCCACCCAAGGGCTTCCTGGTGATGGGCTCCAAGTTCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373941.5
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS CCA 72 bp TCCTCATCCCGCTTGTCACCGTCAGGCCCTGCATCATaGTTCTCGCTGACCGAGGCTGGGCGGGAGAACTCT +
Preference number: 6 (lower is better)
Translates to: SSSRLSPSGPAS*FSLTEAGRENS
Trigger: AGAGTTCTCCCGCCCAGCCTCGGTCAGCGAGAACCATGATGCAGGGCCTGACGGTGACAAGCGGGATGAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373941.5
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000451082.5
ENST00000628415.2
ENST00000636016.2
CDS CCA 72 bp GGCAGCCTGCGCTCCCGTTCCCAGTCTCGATCCCGGTaGATGAGTTTGCTGTTGGGCTCCTTCAGGGTCCTT +
Preference number: 6 (lower is better)
Translates to: GSLRSRSQSRSR*MSLLLGSFRVL
Trigger: AAGGACCCTGAAGGAGCCCAACAGCAAACTCATCCACCGGGATCGAGACTGGGAACGGGAGCGCAGGCTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373941.5
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000451082.5
ENST00000454226.5
ENST00000628415.2
ENST00000636016.2
CDS CCA 72 bp CTCCTGGTCCTGGTCCTCATCGCCTGTGTCACTCTCTaGGGCCCGGGGACGTGGTGGTTTGACTTTCTCCTC +
Preference number: 6 (lower is better)
Translates to: LLVLVLIACVTL*GPGTWWFDFLL
Trigger: GAGGAGAAAGTCAAACCACCACGTCCCCGGGCCCCAGAGAGTGACACAGGCGATGAGGACCAGGACCAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373941.5
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000479336.1
ENST00000636016.2
CDS CCA 72 bp AAGGGCTCCCTGAGCTCCGAAGGCTCCCCTGACCCATaGGAGGTTGGGCTTGGAGAAGCTTCCTCCAGAGCT +
Preference number: 6 (lower is better)
Translates to: KGSLSSEGSPDP*EVGLGEASSRA
Trigger: AGCTCTGGAGGAAGCTTCTCCAAGCCCAACCTCCCATGGGTCAGGGGAGCCTTCGGAGCTCAGGGAGCCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS CAA 90 bp TTGAGATCCCGGGAGAACAGCAGGCCCTCAGTGTCCGAGTCGCTTTaGTCCCGGTCGAGCTCAGGCAGGCTGCGGGAGAAGTCTTCGAAG +
Preference number: 6 (lower is better)
Translates to: LRSRENSRPSVSESL*SRSSSGRLREKSSK
Trigger: CTTCGAAGACTTCTCCCGCAGCCTGCCTGAGCTCGACCGGGACAAAAGCGACTCGGACACTGAGGGCCTGCTGTTCTCCCGGGATCTCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373941.5
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000479336.1
ENST00000636016.2
CDS CAA 90 bp TGGGGTCCCTGCTGGACAGGTCTGGCTTCTGTGTCAGGGTCTGCCTaGCTGGAACCTGTTCCGTCAGCTCTCAGAAGCCAGCAGGAGACC +
Preference number: 6 (lower is better)
Translates to: WGPCWTGLASVSGSA*LEPVPSALRSQQET
Trigger: GGTCTCCTGCTGGCTTCTGAGAGCTGACGGAACAGGTTCCAGCAAGGCAGACCCTGACACAGAAGCCAGACCTGTCCAGCAGGGACCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373950.6
CDS CAA 90 bp GCTTCTGCGTGGGCTGGATCCAATAGAAACGACTGGAGTCCTCCCTaGTCGGAGGCTGGAGAGAGGACGTCCACCTCTGCTGGCCTGGTC +
Preference number: 6 (lower is better)
Translates to: ASAWAGSNRNDWSPP*SEAGERTSTSAGLV
Trigger: GACCAGGCCAGCAGAGGTGGACGTCCTCTCTCCAGCCTCCGACAAGGGAGGACTCCAGTCGTTTCTATTGGATCCAGCCCACGCAGAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS TCA 72 bp GCTTGTCACCGTCAGGCCCTGCATCATGGTTCTCGCTaGCCGAGGCTGGGCGGGAGAACTCTGCTCCATCAA +
Preference number: 6 (lower is better)
Translates to: ACHRQALHHGSR*PRLGGRTLLHQ
Trigger: TTGATGGAGCAGAGTTCTCCCGCCCAGCCTCGGTCAGCGAGAACCATGATGCAGGGCCTGACGGTGACAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373941.5
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000451082.5
ENST00000628415.2
ENST00000636016.2
CDS TCA 72 bp GGCCTGGGATCATGGCAGCTGCCCCCTTCCCGGACTTaGGACTGTTCTCCATGGTGGTCGATATGGTCTCCG +
Preference number: 6 (lower is better)
Translates to: GLGSWQLPPSRT*DCSPWWSIWSP
Trigger: CGGAGACCATATCGACCACCATGGAGAACAGTCTCAAGTCCGGGAAGGGGGCAGCTGCCATGATCCCAGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338074.7
ENST00000373941.5
ENST00000373946.7
ENST00000373950.6
ENST00000451082.5
ENST00000454226.5
ENST00000628415.2
ENST00000636016.2
CDS TCA 72 bp CCCAGCCTGGAAAGAGGTCATCTCCCTTCGCTTCCCTaGAGGGAACCCAAACCCCAGAGGTATGCGCCCCTC +
Preference number: 6 (lower is better)
Translates to: PSLERGHLPSLP*REPKPQRYAPL
Trigger: GAGGGGCGCATACCTCTGGGGTTTGGGTTCCCTTCAGGGAAGCGAAGGGAGATGACCTCTTTCCAGGCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS GCA 72 bp AGTTGGGCGAAGCCCAGGTCTGAGAGCGTACTCCGCTaGTGCTCTGCTTGTCCCACGGGTGCCTCTGAAGAT +
Preference number: 6 (lower is better)
Translates to: SWAKPRSESVLR*CSACPTGASED
Trigger: ATCTTCAGAGGCACCCGTGGGACAAGCAGAGCAGCAGCGGAGTACGCTCTCAGACCTGGGCTTCGCCCAACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479336.1
ENST00000636016.2
CDS GCA 72 bp CAGGTCACCAGGTCCTCCATGGTTCTTGGGGGTCCCTaGCCCTTCCTTTGGGGAAGTCATGTGGGCTTCGTC +
Preference number: 6 (lower is better)
Translates to: QVTRSSMVLGGP*PFLWGSHVGFV
Trigger: GACGAAGCCCACATGACTTCCCCAAAGGAAGGGGCAGGGACCCCCAAGAACCATGGAGGACCTGGTGACCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS GCA 72 bp ATGGGAGGTTGGGCTTGGAGAAGCTTCCTCCAGAGCTaGCAGGTCCTCAGAATGACCAGGGGAGGCTGGCAG +
Preference number: 6 (lower is better)
Translates to: MGGWAWRSFLQS*QVLRMTRGGWQ
Trigger: CTGCCAGCCTCCCCTGGTCATTCTGAGGACCTGGCAGCTCTGGAGGAAGCTTCTCCAAGCCCAACCTCCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS CCA 72 bp AGCCTCCCAGTGTATGGGGTCCCTGCTGGACAGGTCTaGCTTCTGTGTCAGGGTCTGCCTTGCTGGAACCTG +
Preference number: 6 (lower is better)
Translates to: SLPVYGVPAGQV*LLCQGLPCWNL
Trigger: CAGGTTCCAGCAAGGCAGACCCTGACACAGAAGCCAGACCTGTCCAGCAGGGACCCCATACACTGGGAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427533.2
CDS CAA 72 bp GGGCCTGGGATCATGGCAGCTGCCCCCTTCCCGGACTaGAGACTGTTCTCCATGGTGGTCGATATGGTCTCC +
Preference number: 6 (lower is better)
Translates to: GPGIMAAAPFPD*RLFSMVVDMVS
Trigger: GGAGACCATATCGACCACCATGGAGAACAGTCTCAAGTCCGGGAAGGGGGCAGCTGCCATGATCCCAGGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000338074.7
ENST00000373941.5
ENST00000373946.7
ENST00000373950.6
ENST00000451082.5
ENST00000454226.5
ENST00000628415.2
ENST00000636016.2
CDS CAA 90 bp GAGCTGACCGTGATGCTGGAGCACTTGCGCTCAATGGCCAGGTGGTaGTCCTTCAGGAACACCGTGTCCCTCTCCTGGTCCTGGTCCTCA +
Preference number: 6 (lower is better)
Translates to: ELTVMLEHLRSMARW*SFRNTVSLSWSWSS
Trigger: TGAGGACCAGGACCAGGAGAGGGACACGGTGTTCCTGAAGGACAACCACCTGGCCATTGAGCGCAAGTGCTCCAGCATCACGGTCAGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373941.5
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000479336.1
ENST00000636016.2
CDS TCA 72 bp CTTCCTCAGCTCTGTCTGGCCCTCCGGCTGACCATCTaGCATGCAGCGGTTCCTGATGGTTGCCTCTCTGGT +
Preference number: 6 (lower is better)
Translates to: LPQLCLALRLTI*HAAVPDGCLSG
Trigger: ACCAGAGAGGCAACCATCAGGAACCGCTGCATGTCAGATGGTCAGCCGGAGGGCCAGACAGAGCTGAGGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS TCA 72 bp TCTAAGAAAGGGCTCCCTGAGCTCCGAAGGCTCCCCTaGCCCATGGGAGGTTGGGCTTGGAGAAGCTTCCTC +
Preference number: 6 (lower is better)
Translates to: SKKGLPELRRLP*PMGGWAWRSFL
Trigger: GAGGAAGCTTCTCCAAGCCCAACCTCCCATGGGTCAGGGGAGCCTTCGGAGCTCAGGGAGCCCTTTCTTAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS GCA 72 bp CCAGCACGCCTTGAGCTCCGCATCTCCCCACACATTTaGCCAAATGTCAGGGAAAGGCTGAGCAGGCTCCCT +
Preference number: 6 (lower is better)
Translates to: PARLELRISPHI*PNVRERLSRLP
Trigger: AGGGAGCCTGCTCAGCCTTTCCCTGACATTTGGGCAAATGTGTGGGGAGATGCGGAGCTCAAGGCGTGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373946.7
ENST00000452261.5
CDS CCA 72 bp CAATCTTCTGGGGCGATTTCTGGGCCTTGCTGGGCGTaGTCCTCTCCGAAAGGCCATCGGCCTCACTGTAGT +
Preference number: 6 (lower is better)
Translates to: QSSGAISGPCWA*SSPKGHRPHCS
Trigger: ACTACAGTGAGGCCGATGGCCTTTCGGAGAGGACCACGCCCAGCAAGGCCCAGAAATCGCCCCAGAAGATTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373941.5
ENST00000373945.5
ENST00000373946.7
ENST00000373950.6
ENST00000406771.6
ENST00000430276.5
ENST00000432589.5
ENST00000441639.5
ENST00000447825.5
ENST00000452261.5
ENST00000628415.2
ENST00000636016.2
CDS CCA 72 bp ACCGTGATGCTGGAGCACTTGCGCTCAATGGCCAGGTaGTTGTCCTTCAGGAACACCGTGTCCCTCTCCTGG +
Preference number: 6 (lower is better)
Translates to: TVMLEHLRSMAR*LSFRNTVSLSW
Trigger: CCAGGAGAGGGACACGGTGTTCCTGAAGGACAACCACCTGGCCATTGAGCGCAAGTGCTCCAGCATCACGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373941.5
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000479336.1
ENST00000636016.2
CDS CCA 72 bp TTCAGTGTGGGGAAGCTGATGAGCTACTCAGCCCAGTaGTCACTTCCAGGGCCCCTCCTCTGTCCACACCAG +
Preference number: 6 (lower is better)
Translates to: FSVGKLMSYSAQ*SLPGPLLCPHQ
Trigger: CTGGTGTGGACAGAGGAGGGGCCCTGGAAGTGACCACTGGGCTGAGTAGCTCATCAGCTTCCCCACACTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373950.6
CDS CCA 72 bp CTAGGCTCAGTGTATGGGGTCCCTGCTGGACAGGTCTaGCTTCTGTGTCAGGGTCTGCCTTGCTGGAACCTG +
Preference number: 6 (lower is better)
Translates to: LGSVYGVPAGQV*LLCQGLPCWNL
Trigger: CAGGTTCCAGCAAGGCAGACCCTGACACAGAAGCCAGACCTGTCCAGCAGGGACCCCATACACTGAGCCTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373950.6
CDS CCA 72 bp CTGGCTTCTGCGTGGGCTGGATCCAATAGAAACGACTaGAGTCCTCCCTTGTCGGAGGCTGGAGAGAGGACG +
Preference number: 6 (lower is better)
Translates to: LASAWAGSNRND*SPPLSEAGERT
Trigger: CGTCCTCTCTCCAGCCTCCGACAAGGGAGGACTCCAGTCGTTTCTATTGGATCCAGCCCACGCAGAAGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS CCA 72 bp TCCTCCATGGTTCTTGGGGGTCCCTGCCCCTTCCTTTaGGGAAGTCATGTGGGCTTCGTCCTTGCTCCTGCT +
Preference number: 6 (lower is better)
Translates to: SSMVLGGPCPFL*GSHVGFVLAPA
Trigger: AGCAGGAGCAAGGACGAAGCCCACATGACTTCCCCAAAGGAAGGGGCAGGGACCCCCAAGAACCATGGAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS CAA 72 bp GTGATGCTGGAGCACTTGCGCTCAATGGCCAGGTGGTaGTCCTTCAGGAACACCGTGTCCCTCTCCTGGTCC +
Preference number: 6 (lower is better)
Translates to: VMLEHLRSMARW*SFRNTVSLSWS
Trigger: GGACCAGGAGAGGGACACGGTGTTCCTGAAGGACAACCACCTGGCCATTGAGCGCAAGTGCTCCAGCATCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373941.5
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000479336.1
ENST00000636016.2
CDS CAA 72 bp GCCCCTTCCTTTGGGGAAGTCATGTGGGCTTCGTCCTaGCTCCTGCTGGAAGCAGCAGCAGAAACCCTCAGG +
Preference number: 6 (lower is better)
Translates to: APSFGEVMWASS*LLLEAAAETLR
Trigger: CCTGAGGGTTTCTGCTGCTGCTTCCAGCAGGAGCAAGGACGAAGCCCACATGACTTCCCCAAAGGAAGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS CAA 90 bp CTGCGCTCCCGTTCCCAGTCTCGATCCCGGTGGATGAGTTTGCTGTaGGGCTCCTTCAGGGTCCTTTTGAGCTCATTGATGCTGGCCTGG +
Preference number: 6 (lower is better)
Translates to: LRSRSQSRSRWMSLL*GSFRVLLSSLMLAW
Trigger: CCAGGCCAGCATCAATGAGCTCAAAAGGACCCTGAAGGAGCCCAACAGCAAACTCATCCACCGGGATCGAGACTGGGAACGGGAGCGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373941.5
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000451082.5
ENST00000454226.5
ENST00000628415.2
ENST00000636016.2
CDS CAA 90 bp GGCAGCCTGCGCTCCCGTTCCCAGTCTCGATCCCGGTGGATGAGTTaGCTGTTGGGCTCCTTCAGGGTCCTTTTGAGCTCATTGATGCTG +
Preference number: 6 (lower is better)
Translates to: GSLRSRSQSRSRWMS*LLGSFRVLLSSLML
Trigger: CAGCATCAATGAGCTCAAAAGGACCCTGAAGGAGCCCAACAGCAAACTCATCCACCGGGATCGAGACTGGGAACGGGAGCGCAGGCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373941.5
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000451082.5
ENST00000454226.5
ENST00000628415.2
ENST00000636016.2
CDS CAA 90 bp TCAGCCTCCAGGCTAGACGTAGAGCTGACCGTGATGCTGGAGCACTaGCGCTCAATGGCCAGGTGGTTGTCCTTCAGGAACACCGTGTCC +
Preference number: 6 (lower is better)
Translates to: SASRLDVELTVMLEH*RSMARWLSFRNTVS
Trigger: GGACACGGTGTTCCTGAAGGACAACCACCTGGCCATTGAGCGCAAGTGCTCCAGCATCACGGTCAGCTCTACGTCTAGCCTGGAGGCTGA
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373941.5
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000479336.1
ENST00000636016.2
CDS CAA 90 bp GGAACCACTCCCCTCTCTTTGGGTGGGAAGTTGCCTCTGTCTGGTTaGACTGGCTTCCTGACATTCAGAGGGATGGCCCGAGGAAGGGCG +
Preference number: 6 (lower is better)
Translates to: GTTPLSLGGKLPLSG*TGFLTFRGMARGRA
Trigger: CGCCCTTCCTCGGGCCATCCCTCTGAATGTCAGGAAGCCAGTCAAACCAGACAGAGGCAACTTCCCACCCAAAGAGAGGGGAGTGGTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS CAA 90 bp AGGCCTGCGCTCACCTCCTGTGGCAGGGGACACCACAAACCCTACTaGGTCCTTGGGCTCTGGGCTGGCTTTCGAAAGATGGACATGTCT +
Preference number: 6 (lower is better)
Translates to: RPALTSCGRGHHKPY*VLGLWAGFRKMDMS
Trigger: AGACATGTCCATCTTTCGAAAGCCAGCCCAGAGCCCAAGGACCAAGTAGGGTTTGTGGTGTCCCCTGCCACAGGAGGTGAGCGCAGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS CAA 90 bp CGGGAGAACTCTGCTCCATCAAGGCTGCGGGACATGGTGTACCGTTaGCTGGAAGAACGCTCAAAGAAGGGTGCAGGCCGGTCAATGAGG +
Preference number: 6 (lower is better)
Translates to: RENSAPSRLRDMVYR*LEERSKKGAGRSMR
Trigger: CCTCATTGACCGGCCTGCACCCTTCTTTGAGCGTTCTTCCAGCAAACGGTACACCATGTCCCGCAGCCTTGATGGAGCAGAGTTCTCCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373941.5
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS TCA 72 bp TGCTCTGAACCCTCAGGAGATGCTGCGAGGCTTTTCTaGGTGAACACTTCCAAGCCTGCGGCTGCTCCAGGC +
Preference number: 6 (lower is better)
Translates to: CSEPSGDAARLF*VNTSKPAAAPG
Trigger: GCCTGGAGCAGCCGCAGGCTTGGAAGTGTTCACTCAGAAAAGCCTCGCAGCATCTCCTGAGGGTTCAGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS TCA 72 bp CCAGGGGAGGCTGGCAGGGGAATGATCACCTCCATGTaGAGAAATGCTGAAGCCTCGCGGTCCTTCAGCTCA +
Preference number: 6 (lower is better)
Translates to: PGEAGRGMITSM*RNAEASRSFSS
Trigger: TGAGCTGAAGGACCGCGAGGCTTCAGCATTTCTTCACATGGAGGTGATCATTCCCCTGCCAGCCTCCCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS GCA 72 bp ATTTCTTGGCAATCTTCTGGGGCGATTTCTGGGCCTTaGTGGGCGTGGTCCTCTCCGAAAGGCCATCGGCCT +
Preference number: 6 (lower is better)
Translates to: ISWQSSGAISGP*WAWSSPKGHRP
Trigger: AGGCCGATGGCCTTTCGGAGAGGACCACGCCCAGCAAGGCCCAGAAATCGCCCCAGAAGATTGCCAAGAAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373941.5
ENST00000373945.5
ENST00000373946.7
ENST00000373950.6
ENST00000406771.6
ENST00000430276.5
ENST00000432589.5
ENST00000441639.5
ENST00000447825.5
ENST00000452261.5
ENST00000628415.2
ENST00000636016.2
CDS GCA 72 bp CTGCTCCATCAAGGCTGCGGGACATGGTGTACCGTTTaGTGGAAGAACGCTCAAAGAAGGGTGCAGGCCGGT +
Preference number: 6 (lower is better)
Translates to: LLHQGCGTWCTV*WKNAQRRVQAG
Trigger: ACCGGCCTGCACCCTTCTTTGAGCGTTCTTCCAGCAAACGGTACACCATGTCCCGCAGCCTTGATGGAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373941.5
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS GCA 72 bp CCCCTTCCTTTGGGGAAGTCATGTGGGCTTCGTCCTTaGTCCTGCTGGAAGCAGCAGCAGAAACCCTCAGGT +
Preference number: 6 (lower is better)
Translates to: PLPLGKSCGLRP*SCWKQQQKPSG
Trigger: ACCTGAGGGTTTCTGCTGCTGCTTCCAGCAGGAGCAAGGACGAAGCCCACATGACTTCCCCAAAGGAAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS CCA 72 bp ATGTCTAGGCTCTGTTCAGCAGGCCGCGTGTCCTGCTaGGATGGATGCTTCTCATTGGAGTTGGCCTCTGGG +
Preference number: 6 (lower is better)
Translates to: MSRLCSAGRVSC*DGCFSLELASG
Trigger: CCCAGAGGCCAACTCCAATGAGAAGCATCCATCCCAGCAGGACACGCGGCCTGCTGAACAGAGCCTAGACAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338074.7
ENST00000373941.5
ENST00000373946.7
ENST00000406771.6
ENST00000447825.5
ENST00000452261.5
ENST00000636016.2
CDS CCA 72 bp TCTGCCTTCCAGTTTCCCAGGAAGCCTCCCAGTGTATaGGGTCCCTGCTGGACAGGTCTGGCTTCTGTGTCA +
Preference number: 6 (lower is better)
Translates to: SAFQFPRKPPSV*GPCWTGLASVS
Trigger: TGACACAGAAGCCAGACCTGTCCAGCAGGGACCCCATACACTGGGAGGCTTCCTGGGAAACTGGAAGGCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427533.2
CDS CCA 72 bp GGTGCTGCTCCTGCAACCTCGAATGGTGGCATTAGCTaGCTCCAATACCACCACGACAGGGGCAGAATGTCC +
Preference number: 6 (lower is better)
Translates to: GAAPATSNGGIS*LQYHHDRGRMS
Trigger: GGACATTCTGCCCCTGTCGTGGTGGTATTGGAGCCAGCTAATGCCACCATTCGAGGTTGCAGGAGCAGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447825.5
CDS CCA 72 bp TCACCTCCTGTGGCAGGGGACACCACAAACCCTACTTaGTCCTTGGGCTCTGGGCTGGCTTTCGAAAGATGG +
Preference number: 6 (lower is better)
Translates to: SPPVAGDTTNPT*SLGSGLAFERW
Trigger: CCATCTTTCGAAAGCCAGCCCAGAGCCCAAGGACCAAGTAGGGTTTGTGGTGTCCCCTGCCACAGGAGGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS CAA 72 bp TATTTCTTGGCAATCTTCTGGGGCGATTTCTGGGCCTaGCTGGGCGTGGTCCTCTCCGAAAGGCCATCGGCC +
Preference number: 6 (lower is better)
Translates to: YFLAIFWGDFWA*LGVVLSERPSA
Trigger: GGCCGATGGCCTTTCGGAGAGGACCACGCCCAGCAAGGCCCAGAAATCGCCCCAGAAGATTGCCAAGAAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373941.5
ENST00000373945.5
ENST00000373946.7
ENST00000373950.6
ENST00000406771.6
ENST00000430276.5
ENST00000432589.5
ENST00000441639.5
ENST00000447825.5
ENST00000452261.5
ENST00000628415.2
ENST00000636016.2
CDS CAA 72 bp TCTGCTCCATCAAGGCTGCGGGACATGGTGTACCGTTaGCTGGAAGAACGCTCAAAGAAGGGTGCAGGCCGG +
Preference number: 6 (lower is better)
Translates to: SAPSRLRDMVYR*LEERSKKGAGR
Trigger: CCGGCCTGCACCCTTCTTTGAGCGTTCTTCCAGCAAACGGTACACCATGTCCCGCAGCCTTGATGGAGCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373941.5
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS CAA 72 bp CGCTCCCGTTCCCAGTCTCGATCCCGGTGGATGAGTTaGCTGTTGGGCTCCTTCAGGGTCCTTTTGAGCTCA +
Preference number: 6 (lower is better)
Translates to: RSRSQSRSRWMS*LLGSFRVLLSS
Trigger: TGAGCTCAAAAGGACCCTGAAGGAGCCCAACAGCAAACTCATCCACCGGGATCGAGACTGGGAACGGGAGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373941.5
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000451082.5
ENST00000454226.5
ENST00000628415.2
ENST00000636016.2
CDS CAA 72 bp CCAGTAGCTTCTGCCAGCGTGGTTTCACAGCCTGAATaGGGGGACACGGGCTCTAGTTCCGTGTGTGCTTCC +
Preference number: 6 (lower is better)
Translates to: PVASASVVSQPE*GDTGSSSVCAS
Trigger: GGAAGCACACACGGAACTAGAGCCCGTGTCCCCCAATTCAGGCTGTGAAACCACGCTGGCAGAAGCTACTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000479336.1
ENST00000636016.2
CDS CAA 72 bp TGGGCTGGATCCAATAGAAACGACTGGAGTCCTCCCTaGTCGGAGGCTGGAGAGAGGACGTCCACCTCTGCT +
Preference number: 6 (lower is better)
Translates to: WAGSNRNDWSPP*SEAGERTSTSA
Trigger: AGCAGAGGTGGACGTCCTCTCTCCAGCCTCCGACAAGGGAGGACTCCAGTCGTTTCTATTGGATCCAGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS CAA 72 bp CTCACCTCCTGTGGCAGGGGACACCACAAACCCTACTaGGTCCTTGGGCTCTGGGCTGGCTTTCGAAAGATG +
Preference number: 6 (lower is better)
Translates to: LTSCGRGHHKPY*VLGLWAGFRKM
Trigger: CATCTTTCGAAAGCCAGCCCAGAGCCCAAGGACCAAGTAGGGTTTGTGGTGTCCCCTGCCACAGGAGGTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS CAA 90 bp GAGGCATCAAGCAGAGTGACCCGGCAGATGGCACTCTTGTATTTCTaGGCAATCTTCTGGGGCGATTTCTGGGCCTTGCTGGGCGTGGTC +
Preference number: 6 (lower is better)
Translates to: EASSRVTRQMALLYF*AIFWGDFWALLGVV
Trigger: GACCACGCCCAGCAAGGCCCAGAAATCGCCCCAGAAGATTGCCAAGAAATACAAGAGTGCCATCTGCCGGGTCACTCTGCTTGATGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373941.5
ENST00000373945.5
ENST00000373946.7
ENST00000373950.6
ENST00000406771.6
ENST00000430276.5
ENST00000441639.5
ENST00000447825.5
ENST00000452261.5
ENST00000628415.2
ENST00000636016.2
CDS TCA 72 bp TCTCCCCACACATTTGCCCAAATGTCAGGGAAAGGCTaGGCAGGCTCCCTCCCGGGAACTCCTAATCCACCT +
Preference number: 6 (lower is better)
Translates to: SPHTFAQMSGKG*AGSLPGTPNPP
Trigger: AGGTGGATTAGGAGTTCCCGGGAGGGAGCCTGCTCAGCCTTTCCCTGACATTTGGGCAAATGTGTGGGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373946.7
ENST00000452261.5
CDS GCA 72 bp TCCATGTCTAGGCTCTGTTCAGCAGGCCGCGTGTCCTaGTGGGATGGATGCTTCTCATTGGAGTTGGCCTCT +
Preference number: 6 (lower is better)
Translates to: SMSRLCSAGRVS*WDGCFSLELAS
Trigger: AGAGGCCAACTCCAATGAGAAGCATCCATCCCAGCAGGACACGCGGCCTGCTGAACAGAGCCTAGACATGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000338074.7
ENST00000373941.5
ENST00000373946.7
ENST00000406771.6
ENST00000447825.5
ENST00000452261.5
ENST00000636016.2
CDS CCA 72 bp CGGCAGATGGCACTCTTGTATTTCTTGGCAATCTTCTaGGGCGATTTCTGGGCCTTGCTGGGCGTGGTCCTC +
Preference number: 6 (lower is better)
Translates to: RQMALLYFLAIF*GDFWALLGVVL
Trigger: GAGGACCACGCCCAGCAAGGCCCAGAAATCGCCCCAGAAGATTGCCAAGAAATACAAGAGTGCCATCTGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373941.5
ENST00000373945.5
ENST00000373946.7
ENST00000373950.6
ENST00000406771.6
ENST00000430276.5
ENST00000441639.5
ENST00000447825.5
ENST00000452261.5
ENST00000628415.2
ENST00000636016.2
CDS CCA 72 bp CTCCATCAAGGCTGCGGGACATGGTGTACCGTTTGCTaGAAGAACGCTCAAAGAAGGGTGCAGGCCGGTCAA +
Preference number: 6 (lower is better)
Translates to: LHQGCGTWCTVC*KNAQRRVQAGQ
Trigger: TTGACCGGCCTGCACCCTTCTTTGAGCGTTCTTCCAGCAAACGGTACACCATGTCCCGCAGCCTTGATGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373941.5
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS CCA 72 bp CAGAGCTGCCAGGTCCTCAGAATGACCAGGGGAGGCTaGCAGGGGAATGATCACCTCCATGTGAAGAAATGC +
Preference number: 6 (lower is better)
Translates to: QSCQVLRMTRGG*QGNDHLHVKKC
Trigger: GCATTTCTTCACATGGAGGTGATCATTCCCCTGCCAGCCTCCCCTGGTCATTCTGAGGACCTGGCAGCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS CCA 72 bp CTGTGGCAGGGGACACCACAAACCCTACTTGGTCCTTaGGCTCTGGGCTGGCTTTCGAAAGATGGACATGTC +
Preference number: 6 (lower is better)
Translates to: LWQGTPQTLLGP*ALGWLSKDGHV
Trigger: GACATGTCCATCTTTCGAAAGCCAGCCCAGAGCCCAAGGACCAAGTAGGGTTTGTGGTGTCCCCTGCCACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS CAA 72 bp TTCCAGGGGCTACTCCGGATCTGCTTCTTGATCTCCTaGGAGGGGTCCAGCCAGTTCTTCTGGCTGTCAGCA +
Preference number: 6 (lower is better)
Translates to: FQGLLRICFLIS*EGSSQFFWLSA
Trigger: TGCTGACAGCCAGAAGAACTGGCTGGACCCCTCCAAGGAGATCAAGAAGCAGATCCGGAGTAGCCCCTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373941.5
ENST00000373945.5
ENST00000373946.7
ENST00000406771.6
ENST00000430276.5
ENST00000441639.5
ENST00000452261.5
ENST00000628415.2
ENST00000636016.2
CDS CAA 72 bp AGGCTAGACGTAGAGCTGACCGTGATGCTGGAGCACTaGCGCTCAATGGCCAGGTGGTTGTCCTTCAGGAAC +
Preference number: 6 (lower is better)
Translates to: RLDVELTVMLEH*RSMARWLSFRN
Trigger: GTTCCTGAAGGACAACCACCTGGCCATTGAGCGCAAGTGCTCCAGCATCACGGTCAGCTCTACGTCTAGCCT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373941.5
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000479336.1
ENST00000636016.2
CDS CAA 72 bp TTCCAGGGGCTACTCCGGATCTGCTTCTTGATCTCCTaGGAGGGGTCCAGCCAGTTCTCCACCTCACACTCA +
Preference number: 6 (lower is better)
Translates to: FQGLLRICFLIS*EGSSQFSTSHS
Trigger: TGAGTGTGAGGTGGAGAACTGGCTGGACCCCTCCAAGGAGATCAAGAAGCAGATCCGGAGTAGCCCCTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373950.6
CDS CAA 72 bp CCTGTGGCAGGGGACACCACAAACCCTACTTGGTCCTaGGGCTCTGGGCTGGCTTTCGAAAGATGGACATGT +
Preference number: 6 (lower is better)
Translates to: PVAGDTTNPTWS*GSGLAFERWTC
Trigger: ACATGTCCATCTTTCGAAAGCCAGCCCAGAGCCCAAGGACCAAGTAGGGTTTGTGGTGTCCCCTGCCACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS CAA 90 bp CTTGTCCCACGGGTGCCTCTGAAGATACGTCATTTGGAAGGGACCTaGCTTCACCCTCACTCATTCGGCGAGTTTCAGCTCCGTGGGTCT +
Preference number: 6 (lower is better)
Translates to: LVPRVPLKIRHLEGT*LHPHSFGEFQLRGS
Trigger: AGACCCACGGAGCTGAAACTCGCCGAATGAGTGAGGGTGAAGCAAGGTCCCTTCCAAATGACGTATCTTCAGAGGCACCCGTGGGACAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479336.1
ENST00000636016.2
CDS CAA 90 bp GCTGCTGCTCTGCTTGTCCCACGGGTGCCTCTGAAGATACGTCATTaGGAAGGGACCTTGCTTCACCCTCACTCATTCGGCGAGTTTCAG +
Preference number: 6 (lower is better)
Translates to: AAALLVPRVPLKIRH*EGTLLHPHSFGEFQ
Trigger: CTGAAACTCGCCGAATGAGTGAGGGTGAAGCAAGGTCCCTTCCAAATGACGTATCTTCAGAGGCACCCGTGGGACAAGCAGAGCAGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479336.1
ENST00000636016.2
CDS CAA 90 bp TCTGTGGCCACTTCCACTTTGAACTTGTCCACCAGAACGTCTACCTaGGAGAGTCTGCCGTTGGCAAGGATACCAGCAAGGCCTGCCTGC +
Preference number: 6 (lower is better)
Translates to: SVATSTLNLSTRTST*ESLPLARIPARPAC
Trigger: GCAGGCAGGCCTTGCTGGTATCCTTGCCAACGGCAGACTCTCCAAGGTAGACGTTCTGGTGGACAAGTTCAAAGTGGAAGTGGCCACAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS CAA 90 bp CGCTCACCTCCTGTGGCAGGGGACACCACAAACCCTACTTGGTCCTaGGGCTCTGGGCTGGCTTTCGAAAGATGGACATGTCTAAGAAAG +
Preference number: 6 (lower is better)
Translates to: RSPPVAGDTTNPTWS*GSGLAFERWTCLRK
Trigger: CTTTCTTAGACATGTCCATCTTTCGAAAGCCAGCCCAGAGCCCAAGGACCAAGTAGGGTTTGTGGTGTCCCCTGCCACAGGAGGTGAGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS TCA 72 bp GATGGAGGGAGTGGTTGCTATGAACTCCCTCCCCACTaGGGCACTCCCATCAACCTGCTGGGTGTTATCCAT +
Preference number: 6 (lower is better)
Translates to: DGGSGCYELPPH*GTPINLLGVIH
Trigger: ATGGATAACACCCAGCAGGTTGATGGGAGTGCCTCAGTGGGGAGGGAGTTCATAGCAACCACTCCCTCCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373950.6
ENST00000454226.5
ENST00000628415.2
CDS TCA 72 bp GATGGAGGGAGTGGTTGCTATGAACTCCCTCCCCACTaGGGCACTCCCATCAACCTGGGTGTTATCCATAGC +
Preference number: 6 (lower is better)
Translates to: DGGSGCYELPPH*GTPINLGVIHS
Trigger: GCTATGGATAACACCCAGGTTGATGGGAGTGCCTCAGTGGGGAGGGAGTTCATAGCAACCACTCCCTCCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373941.5
ENST00000373946.7
ENST00000451082.5
ENST00000636016.2
CDS TCA 72 bp TGGCAGGGGAATGATCACCTCCATGTGAAGAAATGCTaGAGCCTCGCGGTCCTTCAGCTCAGCCCCTCCTTT +
Preference number: 6 (lower is better)
Translates to: WQGNDHLHVKKC*SLAVLQLSPSF
Trigger: AAAGGAGGGGCTGAGCTGAAGGACCGCGAGGCTTCAGCATTTCTTCACATGGAGGTGATCATTCCCCTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS GCA 72 bp AGCAGTGGAACCAGGACTAGAAGTCTGCGTGGCTTCTaGCTTCCAGTTTCCCAGGAAGCCTCCCAGTGTATG +
Preference number: 6 (lower is better)
Translates to: SSGTRTRSLRGF*LPVSQEASQCM
Trigger: CATACACTGGGAGGCTTCCTGGGAAACTGGAAGGCAGAAGCCACGCAGACTTCTAGTCCTGGTTCCACTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427533.2
CDS CCA 72 bp CTCTTTGGGTGGGAAGTTGCCTCTGTCTGGTTTGACTaGCTTCCTGACATTCAGAGGGATGGCCCGAGGAAG +
Preference number: 6 (lower is better)
Translates to: LFGWEVASVWFD*LPDIQRDGPRK
Trigger: CTTCCTCGGGCCATCCCTCTGAATGTCAGGAAGCCAGTCAAACCAGACAGAGGCAACTTCCCACCCAAAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS CAA 72 bp CTGCTTGTCCCACGGGTGCCTCTGAAGATACGTCATTaGGAAGGGACCTTGCTTCACCCTCACTCATTCGGC +
Preference number: 6 (lower is better)
Translates to: LLVPRVPLKIRH*EGTLLHPHSFG
Trigger: GCCGAATGAGTGAGGGTGAAGCAAGGTCCCTTCCAAATGACGTATCTTCAGAGGCACCCGTGGGACAAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479336.1
ENST00000636016.2
CDS CAA 72 bp TTGTCCACCAGAACGTCTACCTTGGAGAGTCTGCCGTaGGCAAGGATACCAGCAAGGCCTGCCTGCCTTTCT +
Preference number: 6 (lower is better)
Translates to: LSTRTSTLESLP*ARIPARPACLS
Trigger: AGAAAGGCAGGCAGGCCTTGCTGGTATCCTTGCCAACGGCAGACTCTCCAAGGTAGACGTTCTGGTGGACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS CAA 72 bp TGGGTGGGAACCACTCCCCTCTCTTTGGGTGGGAAGTaGCCTCTGTCTGGTTTGACTGGCTTCCTGACATTC +
Preference number: 6 (lower is better)
Translates to: WVGTTPLSLGGK*PLSGLTGFLTF
Trigger: GAATGTCAGGAAGCCAGTCAAACCAGACAGAGGCAACTTCCCACCCAAAGAGAGGGGAGTGGTTCCCACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS CCA 72 bp GTCCTCTGTGAGGAGGGTGCTTCTTCAGTTCCTCTGTaGGACTTTCCTCAGCCTTTCCCAGCAAATCTCCAC +
Preference number: 6 (lower is better)
Translates to: VLCEEGASSVPL*DFPQPFPANLH
Trigger: GTGGAGATTTGCTGGGAAAGGCTGAGGAAAGTCCCACAGAGGAACTGAAGAAGCACCCTCCTCACAGAGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS CCA 72 bp ACTTGGTCCTTGGGCTCTGGGCTGGCTTTCGAAAGATaGACATGTCTAAGAAAGGGCTCCCTGAGCTCCGAA +
Preference number: 6 (lower is better)
Translates to: TWSLGSGLAFER*TCLRKGSLSSE
Trigger: TTCGGAGCTCAGGGAGCCCTTTCTTAGACATGTCCATCTTTCGAAAGCCAGCCCAGAGCCCAAGGACCAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS CCA 72 bp ACTGAGGTCTTGCTAATATCTTCTAGGGAGCCCTCTTaGTCCCCAGCCTGGAAAGAGGTCATCTCCCTTCGC +
Preference number: 6 (lower is better)
Translates to: TEVLLISSREPS*SPAWKEVISLR
Trigger: GCGAAGGGAGATGACCTCTTTCCAGGCTGGGGACCAAGAGGGCTCCCTAGAAGATATTAGCAAGACCTCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS CAA 72 bp CGTTCCCAGTCTCGATCCCGGTGGATGAGTTTGCTGTaGGGCTCCTTCAGGGTCCTTTTGAGCTCATTGATG +
Preference number: 6 (lower is better)
Translates to: RSQSRSRWMSLL*GSFRVLLSSLM
Trigger: CATCAATGAGCTCAAAAGGACCCTGAAGGAGCCCAACAGCAAACTCATCCACCGGGATCGAGACTGGGAACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373941.5
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000451082.5
ENST00000454226.5
ENST00000628415.2
ENST00000636016.2
CDS CAA 72 bp ACAGCTTTGGTTACCAGCATATCAGGATGCTGCAGTTaGGCCTCCTTGATGGCCAAAGCCAGGGCCTGGTCT +
Preference number: 6 (lower is better)
Translates to: TALVTSISGCCS*ASLMAKARAWS
Trigger: AGACCAGGCCCTGGCTTTGGCCATCAAGGAGGCCAAACTGCAGCATCCTGATATGCTGGTAACCAAAGCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373941.5
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS CAA 72 bp CGGGTGCCTCTGAAGATACGTCATTTGGAAGGGACCTaGCTTCACCCTCACTCATTCGGCGAGTTTCAGCTC +
Preference number: 6 (lower is better)
Translates to: RVPLKIRHLEGT*LHPHSFGEFQL
Trigger: GAGCTGAAACTCGCCGAATGAGTGAGGGTGAAGCAAGGTCCCTTCCAAATGACGTATCTTCAGAGGCACCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479336.1
ENST00000636016.2
CDS CAA 90 bp TCATACTCCGAGGCATCAAGCAGAGTGACCCGGCAGATGGCACTCTaGTATTTCTTGGCAATCTTCTGGGGCGATTTCTGGGCCTTGCTG +
Preference number: 6 (lower is better)
Translates to: SYSEASSRVTRQMAL*YFLAIFWGDFWALL
Trigger: CAGCAAGGCCCAGAAATCGCCCCAGAAGATTGCCAAGAAATACAAGAGTGCCATCTGCCGGGTCACTCTGCTTGATGCCTCGGAGTATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373941.5
ENST00000373945.5
ENST00000373946.7
ENST00000373950.6
ENST00000406771.6
ENST00000430276.5
ENST00000441639.5
ENST00000447825.5
ENST00000452261.5
ENST00000628415.2
ENST00000636016.2
CDS CAA 90 bp CGATCCCGGTGGATGAGTTTGCTGTTGGGCTCCTTCAGGGTCCTTTaGAGCTCATTGATGCTGGCCTGGTGCTTCAGCAAGACATCTTCT +
Preference number: 6 (lower is better)
Translates to: RSRWMSLLLGSFRVL*SSLMLAWCFSKTSS
Trigger: AGAAGATGTCTTGCTGAAGCACCAGGCCAGCATCAATGAGCTCAAAAGGACCCTGAAGGAGCCCAACAGCAAACTCATCCACCGGGATCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373941.5
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000451082.5
ENST00000628415.2
ENST00000636016.2
CDS GCA 72 bp TATACGACAGCTTTGGTTACCAGCATATCAGGATGCTaGAGTTTGGCCTCCTTGATGGCCAAAGCCAGGGCC +
Preference number: 6 (lower is better)
Translates to: YTTALVTSISGC*SLASLMAKARA
Trigger: GGCCCTGGCTTTGGCCATCAAGGAGGCCAAACTGCAGCATCCTGATATGCTGGTAACCAAAGCTGTCGTATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373941.5
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS GCA 72 bp ACCTGCTGGGTGTTATCCATAGCGGAGACTCTGGTCTaGAGTACGGCCTCCGGCTCAATCTTCTTTCTAATG +
Preference number: 6 (lower is better)
Translates to: TCWVLSIAETLV*STASGSIFFLM
Trigger: CATTAGAAAGAAGATTGAGCCGGAGGCCGTACTGCAGACCAGAGTCTCCGCTATGGATAACACCCAGCAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338074.7
ENST00000373950.6
ENST00000454226.5
ENST00000628415.2
CDS CAA 72 bp GAGGCATCAAGCAGAGTGACCCGGCAGATGGCACTCTaGTATTTCTTGGCAATCTTCTGGGGCGATTTCTGG +
Preference number: 6 (lower is better)
Translates to: EASSRVTRQMAL*YFLAIFWGDFW
Trigger: CCAGAAATCGCCCCAGAAGATTGCCAAGAAATACAAGAGTGCCATCTGCCGGGTCACTCTGCTTGATGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373941.5
ENST00000373945.5
ENST00000373946.7
ENST00000373950.6
ENST00000406771.6
ENST00000430276.5
ENST00000441639.5
ENST00000447825.5
ENST00000452261.5
ENST00000628415.2
ENST00000636016.2
CDS CAA 72 bp TGGATGAGTTTGCTGTTGGGCTCCTTCAGGGTCCTTTaGAGCTCATTGATGCTGGCCTGGTGCTTCAGCAAG +
Preference number: 6 (lower is better)
Translates to: WMSLLLGSFRVL*SSLMLAWCFSK
Trigger: CTTGCTGAAGCACCAGGCCAGCATCAATGAGCTCAAAAGGACCCTGAAGGAGCCCAACAGCAAACTCATCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373941.5
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000451082.5
ENST00000454226.5
ENST00000628415.2
ENST00000636016.2
CDS CAA 90 bp TGGATGAGTTTGCTGTTGGGCTCCTTCAGGGTCCTTTTGAGCTCATaGATGCTGGCCTGGTGCTTCAGCAAGACATCTTCTGGCTTGTCT +
Preference number: 6 (lower is better)
Translates to: WMSLLLGSFRVLLSS*MLAWCFSKTSSGLS
Trigger: AGACAAGCCAGAAGATGTCTTGCTGAAGCACCAGGCCAGCATCAATGAGCTCAAAAGGACCCTGAAGGAGCCCAACAGCAAACTCATCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373941.5
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000451082.5
ENST00000628415.2
ENST00000636016.2
CDS CAA 90 bp CTTCTGTTTCCCACCATTTCTTCTGTGGCCACTTCCACTTTGAACTaGTCCACCAGAACGTCTACCTTGGAGAGTCTGCCGTTGGCAAGG +
Preference number: 6 (lower is better)
Translates to: LLFPTISSVATSTLN*STRTSTLESLPLAR
Trigger: CCTTGCCAACGGCAGACTCTCCAAGGTAGACGTTCTGGTGGACAAGTTCAAAGTGGAAGTGGCCACAGAAGAAATGGTGGGAAACAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS CAA 90 bp GCTCCGTGGGTCTCAAATATCCGAATTTTGTTGGCCACTGAGGTCTaGCTAATATCTTCTAGGGAGCCCTCTTGGTCCCCAGCCTGGAAA +
Preference number: 6 (lower is better)
Translates to: APWVSNIRILLATEV*LISSREPSWSPAWK
Trigger: TTTCCAGGCTGGGGACCAAGAGGGCTCCCTAGAAGATATTAGCAAGACCTCAGTGGCCAACAAAATTCGGATATTTGAGACCCACGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS GCA 72 bp TTCTCCTGGGTGTTATCCATAGCGGAGACTCTGGTCTaGAGTACGGCCTCCGGCTCAATCTTCTTTCTAATG +
Preference number: 6 (lower is better)
Translates to: FSWVLSIAETLV*STASGSIFFLM
Trigger: CATTAGAAAGAAGATTGAGCCGGAGGCCGTACTGCAGACCAGAGTCTCCGCTATGGATAACACCCAGGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000202028.9
ENST00000441639.5
CDS GCA 72 bp CTGTATACGACAGCTTTGGTTACCAGCATATCAGGATaGTGCAGTTTGGCCTCCTTGATGGCCAAAGCCAGG +
Preference number: 6 (lower is better)
Translates to: LYTTALVTSISG*CSLASLMAKAR
Trigger: CCTGGCTTTGGCCATCAAGGAGGCCAAACTGCAGCATCCTGATATGCTGGTAACCAAAGCTGTCGTATACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373941.5
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS GCA 72 bp TCAACCTGGGTGTTATCCATAGCGGAGACTCTGGTCTaGAGTACGGCCTCCGGCTCAATCTTCTTTCTAATG +
Preference number: 6 (lower is better)
Translates to: STWVLSIAETLV*STASGSIFFLM
Trigger: CATTAGAAAGAAGATTGAGCCGGAGGCCGTACTGCAGACCAGAGTCTCCGCTATGGATAACACCCAGGTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373941.5
ENST00000373946.7
ENST00000451082.5
ENST00000636016.2
CDS CCA 72 bp GCTTCACCCTCACTCATTCGGCGAGTTTCAGCTCCGTaGGTCTCAAATATCCGAATTTTGTTGGCCACTGAG +
Preference number: 6 (lower is better)
Translates to: ASPSLIRRVSAP*VSNIRILLATE
Trigger: CTCAGTGGCCAACAAAATTCGGATATTTGAGACCCACGGAGCTGAAACTCGCCGAATGAGTGAGGGTGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS CAA 72 bp ACTTCCACTTTGAACTTGTCCACCAGAACGTCTACCTaGGAGAGTCTGCCGTTGGCAAGGATACCAGCAAGG +
Preference number: 6 (lower is better)
Translates to: TSTLNLSTRTST*ESLPLARIPAR
Trigger: CCTTGCTGGTATCCTTGCCAACGGCAGACTCTCCAAGGTAGACGTTCTGGTGGACAAGTTCAAAGTGGAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS CCA 72 bp CTGTCAGTCAGGCACTTGTCTCACTTAAGTGGCAGCTaGGATTATCCCCATTTTGCAGATCAGGAGCCTATC +
Preference number: 6 (lower is better)
Translates to: LSVRHLSHLSGS*DYPHFADQEPI
Trigger: GATAGGCTCCTGATCTGCAAAATGGGGATAATCCCAGCTGCCACTTAAGTGAGACAAGTGCCTGACTGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000202028.9
CDS CCA 72 bp TCGATGCAGACCTTCCACAGTCTCTTGGCTGACCGGTaGTTTGGGAGCTTAAAGCCAATTGTGCTCTCAAAT +
Preference number: 6 (lower is better)
Translates to: SMQTFHSLLADR*FGSLKPIVLSN
Trigger: ATTTGAGAGCACAATTGGCTTTAAGCTCCCAAACCACCGGTCAGCCAAGAGACTGTGGAAGGTCTGCATCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373941.5
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS CCA 72 bp TCCTTCAGGGTCCTTTTGAGCTCATTGATGCTGGCCTaGTGCTTCAGCAAGACATCTTCTGGCTTGTCTAAG +
Preference number: 6 (lower is better)
Translates to: SFRVLLSSLMLA*CFSKTSSGLSK
Trigger: CTTAGACAAGCCAGAAGATGTCTTGCTGAAGCACCAGGCCAGCATCAATGAGCTCAAAAGGACCCTGAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373941.5
ENST00000373946.7
ENST00000373950.6
ENST00000441639.5
ENST00000451082.5
ENST00000628415.2
ENST00000636016.2
CDS CCA 72 bp CTGGGGATGGGTCTGTTTCTCTGTATACGACAGCTTTaGTTACCAGCATATCAGGATGCTGCAGTTTGGCCT +
Preference number: 6 (lower is better)
Translates to: LGMGLFLCIRQL*LPAYQDAAVWP
Trigger: AGGCCAAACTGCAGCATCCTGATATGCTGGTAACCAAAGCTGTCGTATACAGAGAAACAGACCCATCCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373941.5
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS CCA 72 bp CAAATTTCAGGGTCCTTTAAACAAGCTCTGGATTTCTaGTCAGGTGCTGCTCCTGCAACCTCGAATGGTGGC +
Preference number: 6 (lower is better)
Translates to: QISGSFKQALDF*SGAAPATSNGG
Trigger: GCCACCATTCGAGGTTGCAGGAGCAGCACCTGACCAGAAATCCAGAGCTTGTTTAAAGGACCCTGAAATTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447825.5
CDS CAA 72 bp GGCCTTCCTCCCCCACTGACTCAAAGTCTTCAGGACTaGCAATCATTTTTCCTTGTTGCTGGGTGTTTGCTC +
Preference number: 6 (lower is better)
Translates to: GLPPPLTQSLQD*QSFFLVAGCLL
Trigger: GAGCAAACACCCAGCAACAAGGAAAAATGATTGCAAGTCCTGAAGACTTTGAGTCAGTGGGGGAGGAAGGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS CAA 90 bp AGAATCCAGAATGAAGGCCCCTTCTTAATGGTTCTCTGGCTTGGGTaGGACCAGAAATGCCAGGATCTCTTCACAGAGGTCAGGATTCCT +
Preference number: 6 (lower is better)
Translates to: RIQNEGPFLMVLWLG*DQKCQDLFTEVRIP
Trigger: AGGAATCCTGACCTCTGTGAAGAGATCCTGGCATTTCTGGTCCAACCCAAGCCAGAGAACCATTAAGAAGGGGCCTTCATTCTGGATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000202028.9
ENST00000338074.7
ENST00000373946.7
ENST00000373950.6
ENST00000432603.1
ENST00000441639.5
ENST00000628415.2
ENST00000636016.2
CDS CAA 90 bp TTTGCTCTTCTGTTTCCCACCATTTCTTCTGTGGCCACTTCCACTTaGAACTTGTCCACCAGAACGTCTACCTTGGAGAGTCTGCCGTTG +
Preference number: 6 (lower is better)
Translates to: FALLFPTISSVATST*NLSTRTSTLESLPL
Trigger: CAACGGCAGACTCTCCAAGGTAGACGTTCTGGTGGACAAGTTCAAAGTGGAAGTGGCCACAGAAGAAATGGTGGGAAACAGAAGAGCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS CAA 90 bp ATTCGGCGAGTTTCAGCTCCGTGGGTCTCAAATATCCGAATTTTGTaGGCCACTGAGGTCTTGCTAATATCTTCTAGGGAGCCCTCTTGG +
Preference number: 6 (lower is better)
Translates to: IRRVSAPWVSNIRIL*ATEVLLISSREPSW
Trigger: CCAAGAGGGCTCCCTAGAAGATATTAGCAAGACCTCAGTGGCCAACAAAATTCGGATATTTGAGACCCACGGAGCTGAAACTCGCCGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS CAA 90 bp CTCATTCGGCGAGTTTCAGCTCCGTGGGTCTCAAATATCCGAATTTaGTTGGCCACTGAGGTCTTGCTAATATCTTCTAGGGAGCCCTCT +
Preference number: 6 (lower is better)
Translates to: LIRRVSAPWVSNIRI*LATEVLLISSREPS
Trigger: AGAGGGCTCCCTAGAAGATATTAGCAAGACCTCAGTGGCCAACAAAATTCGGATATTTGAGACCCACGGAGCTGAAACTCGCCGAATGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS TCA 72 bp TGTTTCCCACCATTTCTTCTGTGGCCACTTCCACTTTaGACTTGTCCACCAGAACGTCTACCTTGGAGAGTC +
Preference number: 6 (lower is better)
Translates to: CFPPFLLWPLPL*TCPPERLPWRV
Trigger: GACTCTCCAAGGTAGACGTTCTGGTGGACAAGTTCAAAGTGGAAGTGGCCACAGAAGAAATGGTGGGAAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS CAA 72 bp CTGTTTCCCACCATTTCTTCTGTGGCCACTTCCACTTaGAACTTGTCCACCAGAACGTCTACCTTGGAGAGT +
Preference number: 6 (lower is better)
Translates to: LFPTISSVATST*NLSTRTSTLES
Trigger: ACTCTCCAAGGTAGACGTTCTGGTGGACAAGTTCAAAGTGGAAGTGGCCACAGAAGAAATGGTGGGAAACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS CAA 72 bp GTCTCAAATATCCGAATTTTGTTGGCCACTGAGGTCTaGCTAATATCTTCTAGGGAGCCCTCTTGGTCCCCA +
Preference number: 6 (lower is better)
Translates to: VSNIRILLATEV*LISSREPSWSP
Trigger: TGGGGACCAAGAGGGCTCCCTAGAAGATATTAGCAAGACCTCAGTGGCCAACAAAATTCGGATATTTGAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS CAA 72 bp CGAGTTTCAGCTCCGTGGGTCTCAAATATCCGAATTTaGTTGGCCACTGAGGTCTTGCTAATATCTTCTAGG +
Preference number: 6 (lower is better)
Translates to: RVSAPWVSNIRI*LATEVLLISSR
Trigger: CCTAGAAGATATTAGCAAGACCTCAGTGGCCAACAAAATTCGGATATTTGAGACCCACGGAGCTGAAACTCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636016.2
CDS TCA 72 bp AAGGTCACAGAGAGAATCAGACATAGAAGAAGGATTTaGACTCAGGCCTCCTTGATGAAAAAGCCCATGGTC +
Preference number: 6 (lower is better)
Translates to: KVTERIRHRRRI*TQASLMKKPMV
Trigger: GACCATGGGCTTTTTCATCAAGGAGGCCTGAGTTCAAATCCTTCTTCTATGTCTGATTCTCTCTGTGACCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000447825.5
CDS CAA 72 bp CTCAAAGTCTTCAGGACTTGCAATCATTTTTCCTTGTaGCTGGGTGTTTGCTCTTCTGTTTCCCACCATTTC +
Preference number: 6 (lower is better)
Translates to: LKVFRTCNHFSL*LGVCSSVSHHF
Trigger: GAAATGGTGGGAAACAGAAGAGCAAACACCCAGCAACAAGGAAAAATGATTGCAAGTCCTGAAGACTTTGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636016.2