RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EPB41 (Homo sapiens)

Ensembl gene IDs: ENSG00000159023

Ensembl transcript IDs: ENST00000343067.9, ENST00000347529.7, ENST00000349460.9, ENST00000373797.2, ENST00000373798.5, ENST00000373800.7, ENST00000460378.1, ENST00000462032.1, ENST00000482464.6, ENST00000636666.1, ENST00000642643.1, ENST00000642937.2, ENST00000643155.1, ENST00000643173.1, ENST00000643302.1, ENST00000643604.1, ENST00000644342.1, ENST00000644470.1, ENST00000644600.1, ENST00000644780.1, ENST00000644848.1, ENST00000645111.1, ENST00000645184.1, ENST00000645999.1, ENST00000646189.1, ENST00000646260.1, ENST00000646800.1, ENST00000646871.1, ENST00000647103.1, ENST00000647918.1, ENST00000648181.1, ENST00000648891.1, ENST00000649674.1, ENST00000649717.1, ENST00000649992.1, ENST00000650132.1, ENST00000650265.1

Found 2981 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GAAATTTCCCGTGAGCATCAAAAGGCGTCAGTCAGGCCGCAGCTCTaGCTCCAGTTCCCGAGGTTTGTTGTCTCCTCACCCCCAGCTGCC +
Preference number: 1 (lower is better)
Translates to: EISREHQKASVRPQL*LQFPRFVVSSPPAA
Trigger: GGCAGCTGGGGGTGAGGAGACAACAAACCTCGGGAACTGGAGCCAGAGCTGCGGCCTGACTGACGCCTTTTGATGCTCACGGGAAATTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
3UTR CCA 90 bp GTAAGCTGCATTTCTTGTCACCACTCCTGGCAACACGACCAGGCTTaGGCACTACCCCAAAGCCCACCTTTCAGACCCTCTGCCCACAGC +
Preference number: 1 (lower is better)
Translates to: VSCISCHHSWQHDQA*ALPQSPPFRPSAHS
Trigger: GCTGTGGGCAGAGGGTCTGAAAGGTGGGCTTTGGGGTAGTGCCCAAGCCTGGTCGTGTTGCCAGGAGTGGTGACAAGAAATGCAGCTTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
3UTR GCA 90 bp CCCGCAGTTAGGCTCCCTGAGCCCTCGGCTTATAAATACAGGTCTTaGTTTGTGGGTGGGTGCCAGAGTCCTCATGTGGCTTGGAGGAAA +
Preference number: 1 (lower is better)
Translates to: PAVRLPEPSAYKYRS*FVGGCQSPHVAWRK
Trigger: TTTCCTCCAAGCCACATGAGGACTCTGGCACCCACCCACAAAGCAAGACCTGTATTTATAAGCCGAGGGCTCAGGGAGCCTAACTGCGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
3UTR CCA 90 bp GAGATAGGACAAGCTCTTTCCCCTAAGCCTGTCCCACGTCCCACCTaGGCTCTTTCCCTCCCTCCTGTTGTTCATGTCTCACATGGGTAC +
Preference number: 1 (lower is better)
Translates to: EIGQALSPKPVPRPT*ALSLPPVVHVSHGY
Trigger: GTACCCATGTGAGACATGAACAACAGGAGGGAGGGAAAGAGCCCAGGTGGGACGTGGGACAGGCTTAGGGGAAAGAGCTTGTCCTATCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR TCA 90 bp CTTTCCGAGGTCTGTGGATCAGGGCTGGTGCCCTCCCTGGCATTCTaGTACACTCACATCACTGGCTCTGAGAAAGGGCTGGTTCATGAA +
Preference number: 1 (lower is better)
Translates to: LSEVCGSGLVPSLAF*YTHITGSEKGLVHE
Trigger: TTCATGAACCAGCCCTTTCTCAGAGCCAGTGATGTGAGTGTATCAGAATGCCAGGGAGGGCACCAGCCCTGATCCACAGACCTCGGAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR GCA 90 bp GAGACTTTGGACGGTGTTGGGAGAAGCAGCTTTAGACATTTCTCTTaGTCACTGCCCTTGAGCCCCAGTGACTGCTGCCCGATACCCACT +
Preference number: 1 (lower is better)
Translates to: ETLDGVGRSSFRHFS*SLPLSPSDCCPIPT
Trigger: AGTGGGTATCGGGCAGCAGTCACTGGGGCTCAAGGGCAGTGAGCAAGAGAAATGTCTAAAGCTGCTTCTCCCAACACCGTCCAAAGTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR CCA 90 bp AAAACCACCCGCAACAAAGGAACAGGGGCATCTTTCCGAGGTCTGTaGATCAGGGCTGGTGCCCTCCCTGGCATTCTGATACACTCACAT +
Preference number: 1 (lower is better)
Translates to: KTTRNKGTGASFRGL*IRAGALPGILIHSH
Trigger: ATGTGAGTGTATCAGAATGCCAGGGAGGGCACCAGCCCTGATCCACAGACCTCGGAAAGATGCCCCTGTTCCTTTGTTGCGGGTGGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR TCA 90 bp GAGCTGAGGGAAACGTTTAGGCCCCCGATGAACGGTCCTGTGCTGTaGAAGCTGCCACACTGTTCTAGATCACACGGAATATTCAGTGGG +
Preference number: 1 (lower is better)
Translates to: ELRETFRPPMNGPVL*KLPHCSRSHGIFSG
Trigger: CCCACTGAATATTCCGTGTGATCTAGAACAGTGTGGCAGCTTTCACAGCACAGGACCGTTCATCGGGGGCCTAAACGTTTCCCTCAGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
3UTR GCA 90 bp GCCATCAGGCAGTGGGCATGCACTACATGTTCGTTTGATGTAAGCTaGATTTCTTGTCACCACTCCTGGCAACACGACCAGGCTTGGGCA +
Preference number: 1 (lower is better)
Translates to: AIRQWACTTCSFDVS*ISCHHSWQHDQAWA
Trigger: TGCCCAAGCCTGGTCGTGTTGCCAGGAGTGGTGACAAGAAATGCAGCTTACATCAAACGAACATGTAGTGCATGCCCACTGCCTGATGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
3UTR CCA 90 bp GGGATAAGACTAGGGAGAGACGCGGAAGTCCCACTAAGCTGGCTTTaGCTTCCAACACAGCTGACAAGAGTCCTTGGAGGATTTCCCGAA +
Preference number: 1 (lower is better)
Translates to: GIRLGRDAEVPLSWL*LPTQLTRVLGGFPE
Trigger: TTCGGGAAATCCTCCAAGGACTCTTGTCAGCTGTGTTGGAAGCCAAAGCCAGCTTAGTGGGACTTCCGCGTCTCTCCCTAGTCTTATCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR CCA 90 bp GCTTGGGGTCTCAGATGTGATAGTTTGAGCTGTCAGCAAGACTCCTaGGTCCAAGTCTCCACTGTTGTCGTCAGTCTGGGCAGCCTCATA +
Preference number: 1 (lower is better)
Translates to: AWGLRCDSLSCQQDS*VQVSTVVVSLGSLI
Trigger: TATGAGGCTGCCCAGACTGACGACAACAGTGGAGACTTGGACCCAGGAGTCTTGCTGACAGCTCAAACTATCACATCTGAGACCCCAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643155.1
3UTR TCA 90 bp AGGCCATCTGGCCATCAGGCAGTGGGCATGCACTACATGTTCGTTTaGTGTAAGCTGCATTTCTTGTCACCACTCCTGGCAACACGACCA +
Preference number: 1 (lower is better)
Translates to: RPSGHQAVGMHYMFV*CKLHFLSPLLATRP
Trigger: TGGTCGTGTTGCCAGGAGTGGTGACAAGAAATGCAGCTTACATCAAACGAACATGTAGTGCATGCCCACTGCCTGATGGCCAGATGGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
3UTR CCA 90 bp CCAAAGGGGATAAGACTAGGGAGAGACGCGGAAGTCCCACTAAGCTaGCTTTGGCTTCCAACACAGCTGACAAGAGTCCTTGGAGGATTT +
Preference number: 1 (lower is better)
Translates to: PKGIRLGRDAEVPLS*LWLPTQLTRVLGGF
Trigger: AAATCCTCCAAGGACTCTTGTCAGCTGTGTTGGAAGCCAAAGCCAGCTTAGTGGGACTTCCGCGTCTCTCCCTAGTCTTATCCCCTTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR TCA 90 bp GTGTTGGGAGAAGCAGCTTTAGACATTTCTCTTGCTCACTGCCCTTaGGCCCCAGTGACTGCTGCCCGATACCCACTGTCTATTTTAGGA +
Preference number: 1 (lower is better)
Translates to: VLGEAALDISLAHCP*APVTAARYPLSILG
Trigger: TCCTAAAATAGACAGTGGGTATCGGGCAGCAGTCACTGGGGCTCAAGGGCAGTGAGCAAGAGAAATGTCTAAAGCTGCTTCTCCCAACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR GCA 90 bp AGCTTTAGACATTTCTCTTGCTCACTGCCCTTGAGCCCCAGTGACTaGTGCCCGATACCCACTGTCTATTTTAGGAAGCTGGAACTGGGA +
Preference number: 1 (lower is better)
Translates to: SFRHFSCSLPLSPSD*CPIPTVYFRKLELG
Trigger: TCCCAGTTCCAGCTTCCTAAAATAGACAGTGGGTATCGGGCAGCAGTCACTGGGGCTCAAGGGCAGTGAGCAAGAGAAATGTCTAAAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR GCA 90 bp CTGGTAGCTCTTCCTACAGGCCATCTGGCCATCAGGCAGTGGGCATaGACTACATGTTCGTTTGATGTAAGCTGCATTTCTTGTCACCAC +
Preference number: 1 (lower is better)
Translates to: LVALPTGHLAIRQWA*TTCSFDVSCISCHH
Trigger: GTGGTGACAAGAAATGCAGCTTACATCAAACGAACATGTAGTGCATGCCCACTGCCTGATGGCCAGATGGCCTGTAGGAAGAGCTACCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
3UTR CCA 90 bp ACTACATGTTCGTTTGATGTAAGCTGCATTTCTTGTCACCACTCCTaGCAACACGACCAGGCTTGGGCACTACCCCAAAGCCCACCTTTC +
Preference number: 1 (lower is better)
Translates to: TTCSFDVSCISCHHS*QHDQAWALPQSPPF
Trigger: GAAAGGTGGGCTTTGGGGTAGTGCCCAAGCCTGGTCGTGTTGCCAGGAGTGGTGACAAGAAATGCAGCTTACATCAAACGAACATGTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
3UTR CCA 90 bp GAAGCCCTGGTAGCTCTTCCTACAGGCCATCTGGCCATCAGGCAGTaGGCATGCACTACATGTTCGTTTGATGTAAGCTGCATTTCTTGT +
Preference number: 1 (lower is better)
Translates to: EALVALPTGHLAIRQ*ACTTCSFDVSCISC
Trigger: ACAAGAAATGCAGCTTACATCAAACGAACATGTAGTGCATGCCCACTGCCTGATGGCCAGATGGCCTGTAGGAAGAGCTACCAGGGCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
3UTR TCA 90 bp CCTGTGGGGATTTGCCCATTGATGTTAAGAGTTCGGAAGGGTGAGTaGGTGGATAAGCGTTTATCCCATTCACTAGGCCGTGGTTCTGGT +
Preference number: 1 (lower is better)
Translates to: PVGICPLMLRVRKGE*VDKRLSHSLGRGSG
Trigger: ACCAGAACCACGGCCTAGTGAATGGGATAAACGCTTATCCACTCACTCACCCTTCCGAACTCTTAACATCAATGGGCAAATCCCCACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
3UTR GCA 90 bp TTTAGACATTTCTCTTGCTCACTGCCCTTGAGCCCCAGTGACTGCTaGCCGATACCCACTGTCTATTTTAGGAAGCTGGAACTGGGATTC +
Preference number: 1 (lower is better)
Translates to: FRHFSCSLPLSPSDC*PIPTVYFRKLELGF
Trigger: GAATCCCAGTTCCAGCTTCCTAAAATAGACAGTGGGTATCGGGCAGCAGTCACTGGGGCTCAAGGGCAGTGAGCAAGAGAAATGTCTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR GCA 90 bp CTCTTGTCTAAATCCTTCCATGCTTCTGTGGGCTCTGGCTCAGCTTaGTCAGGTGGCTCGTCTTCCTTTTTCACTTCAGCCTTCACTGTT +
Preference number: 1 (lower is better)
Translates to: LLSKSFHASVGSGSA*SGGSSSFFTSAFTV
Trigger: AACAGTGAAGGCTGAAGTGAAAAAGGAAGACGAGCCACCTGAGCAAGCTGAGCCAGAGCCCACAGAAGCATGGAAGGATTTAGACAAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000642643.1
3UTR CCA 90 bp TTAGGCTCCCTGAGCCCTCGGCTTATAAATACAGGTCTTGCTTTGTaGGTGGGTGCCAGAGTCCTCATGTGGCTTGGAGGAAATCTTTAT +
Preference number: 1 (lower is better)
Translates to: LGSLSPRLINTGLAL*VGARVLMWLGGNLY
Trigger: ATAAAGATTTCCTCCAAGCCACATGAGGACTCTGGCACCCACCCACAAAGCAAGACCTGTATTTATAAGCCGAGGGCTCAGGGAGCCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
3UTR CCA 90 bp CCCTGGCATTCTGATACACTCACATCACTGGCTCTGAGAAAGGGCTaGTTCATGAAGTTTCTGCCATCATCCAAAGGGGATAAGACTAGG +
Preference number: 1 (lower is better)
Translates to: PWHSDTLTSLALRKG*FMKFLPSSKGDKTR
Trigger: CCTAGTCTTATCCCCTTTGGATGATGGCAGAAACTTCATGAACCAGCCCTTTCTCAGAGCCAGTGATGTGAGTGTATCAGAATGCCAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR CCA 90 bp GCATGTAGCTGCAGAGACAGTTCTCAGAGGCTAATCATCTACTGGTaGCTCCAAATAGCTCCTATAATTGCACTGGGTAGCCTACCTGAC +
Preference number: 1 (lower is better)
Translates to: ACSCRDSSQRLIIYW*LQIAPIIALGSLPD
Trigger: GTCAGGTAGGCTACCCAGTGCAATTATAGGAGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTGAGAACTGTCTCTGCAGCTACATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648181.1
ENST00000648891.1
3UTR GCA 90 bp CCTGAGCCCTCGGCTTATAAATACAGGTCTTGCTTTGTGGGTGGGTaGCAGAGTCCTCATGTGGCTTGGAGGAAATCTTTATTTCTCAAA +
Preference number: 1 (lower is better)
Translates to: PEPSAYKYRSCFVGG*QSPHVAWRKSLFLK
Trigger: TTTGAGAAATAAAGATTTCCTCCAAGCCACATGAGGACTCTGGCACCCACCCACAAAGCAAGACCTGTATTTATAAGCCGAGGGCTCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
3UTR CCA 90 bp CACACCCGAAATGAGTTCAAACCAGCCGAAACAAAACTCAGGCAGTaGAGACTTTGGACGGTGTTGGGAGAAGCAGCTTTAGACATTTCT +
Preference number: 1 (lower is better)
Translates to: HTRNEFKPAETKLRQ*RLWTVLGEAALDIS
Trigger: AGAAATGTCTAAAGCTGCTTCTCCCAACACCGTCCAAAGTCTCCACTGCCTGAGTTTTGTTTCGGCTGGTTTGAACTCATTTCGGGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR CCA 90 bp GAAGCATGTAGCTGCAGAGACAGTTCTCAGAGGCTAATCATCTACTaGTGGCTCCAAATAGCTCCTATAATTGCACTGGGTAGCCTACCT +
Preference number: 1 (lower is better)
Translates to: EACSCRDSSQRLIIY*WLQIAPIIALGSLP
Trigger: AGGTAGGCTACCCAGTGCAATTATAGGAGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTGAGAACTGTCTCTGCAGCTACATGCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648181.1
ENST00000648891.1
3UTR CCA 90 bp AATGAGTTCAAACCAGCCGAAACAAAACTCAGGCAGTGGAGACTTTaGACGGTGTTGGGAGAAGCAGCTTTAGACATTTCTCTTGCTCAC +
Preference number: 1 (lower is better)
Translates to: NEFKPAETKLRQWRL*TVLGEAALDISLAH
Trigger: GTGAGCAAGAGAAATGTCTAAAGCTGCTTCTCCCAACACCGTCCAAAGTCTCCACTGCCTGAGTTTTGTTTCGGCTGGTTTGAACTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR TCA 90 bp CACCCATCTTGCTGGGCTTGTCCAAATCTATGGCTTCTAAGAGCCTaGAAGGCATTAGAGCTCTTTTCATCCAATTTACAGACAACGAAG +
Preference number: 1 (lower is better)
Translates to: HPSCWACPNLWLLRA*KALELFSSNLQTTK
Trigger: CTTCGTTGTCTGTAAATTGGATGAAAAGAGCTCTAATGCCTTTCAGGCTCTTAGAAGCCATAGATTTGGACAAGCCCAGCAAGATGGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
3UTR TCA 90 bp TGGAATGCCCAATATTTTTCCTCTGATAATTGTGATGGTATCTTTTaGGTCTGCATTGGTCAGCTTCATCCAATACAAGGGCTTGGCCAT +
Preference number: 1 (lower is better)
Translates to: WNAQYFSSDNCDGIF*VCIGQLHPIQGLGH
Trigger: ATGGCCAAGCCCTTGTATTGGATGAAGCTGACCAATGCAGACTCAAAAGATACCATCACAATTATCAGAGGAAAAATATTGGGCATTCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000636666.1
ENST00000644342.1
ENST00000646800.1
3UTR CCA 90 bp TTTGGAGCACTCTTCAAGTCCTTCTCCTTCCTTAATTTCAAAATCTaGATCTTCTCTGAGTTCTTCCTGAGCAGGACTTTTAACGATGCA +
Preference number: 1 (lower is better)
Translates to: FGALFKSFSFLNFKI*IFSEFFLSRTFNDA
Trigger: TGCATCGTTAAAAGTCCTGCTCAGGAAGAACTCAGAGAAGATCCAGATTTTGAAATTAAGGAAGGAGAAGGACTTGAAGAGTGCTCCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643155.1
3UTR TCA 90 bp AAACCATATCAACACTCTACTTGTGAAAAGATGGCATTTAATCTTTaGAGATCTCTTCTATACACCAGGCAGGAAAAAGTTGTCTGTCCC +
Preference number: 1 (lower is better)
Translates to: KPYQHSTCEKMAFNL*RSLLYTRQEKVVCP
Trigger: GGGACAGACAACTTTTTCCTGCCTGGTGTATAGAAGAGATCTTCAAAGATTAAATGCCATCTTTTCACAAGTAGAGTGTTGATATGGTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
3UTR TCA 90 bp CTTTCCTATTTTGACCTTCCTAAATTTAGTAAACTTTCTAGTCCCTaGAGGCACAGTTTGAATACAAATAAACCTCTACTGGCTTATGGT +
Preference number: 1 (lower is better)
Translates to: LSYFDLPKFSKLSSP*RHSLNTNKPLLAYG
Trigger: ACCATAAGCCAGTAGAGGTTTATTTGTATTCAAACTGTGCCTTCAGGGACTAGAAAGTTTACTAAATTTAGGAAGGTCAAAATAGGAAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648181.1
ENST00000648891.1
3UTR-3UTR GCA 90 bp TGGGCCGAGGACTTCGGTCTGCCGAATCGACAGCTGCTGCTCCATCGAGGCTCCCCGAGGACTTCGGTCTaGCGAATCGACAGCTGCTGC +
Preference number: 2 (lower is better)
Translates to: WAEDFGLPNRQLLLHRGSPRTSV*RIDSCC
Trigger: GCAGCAGCTGTCGATTCGGCAGACCGAAGTCCTCGG...GGAGCCTCGATGGAGCAGCAGCTGTCGATTCGGCAGACCGAAGTCCTCGGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
3UTR-3UTR TCA 90 bp GGTAGCTCTTCCTACAGGCCATCTGGCCATCAGGCAGTGGGCATGCACTACATGGCCCTTGAGCCCCAGTaGCTGCTGCCCGATACCCAC +
Preference number: 2 (lower is better)
Translates to: GSSSYRPSGHQAVGMHYMALEPQ*LLPDTH
Trigger: GTGGGTATCGGGCAGCAGTCACTGGGGCTCAAGGGC...CATGTAGTGCATGCCCACTGCCTGATGGCCAGATGGCCTGTAGGAAGAGCTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
3UTR-3UTR GCA 90 bp AGGACTTCGGTCTGCCGAATCGACAGCTGCTGCTCCATCGAGGCTCCGGGACGCGGACGCCCGTTTACTTaGTGTACGCTCGAAGTGTGG +
Preference number: 2 (lower is better)
Translates to: RTSVCRIDSCCSIEAPGRGRPFT*CTLEVW
Trigger: CCACACTTCGAGCGTACAGCAAGTAAACGGGCGTCC...GCGTCCCGGAGCCTCGATGGAGCAGCAGCTGTCGATTCGGCAGACCGAAGTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
3UTR-3UTR GCA 90 bp CTGAGTAATGGCAGGTGCAGAAGTGGGCCGAGGACTTCGGTCTGCCGAATCGACCCGAGGACTTCGGTCTaGCGAATCGACAGCTGCTGC +
Preference number: 2 (lower is better)
Translates to: LSNGRCRSGPRTSVCRIDPRTSV*RIDSCC
Trigger: GCAGCAGCTGTCGATTCGGCAGACCGAAGTCCTCGG...GTCGATTCGGCAGACCGAAGTCCTCGGCCCACTTCTGCACCTGCCATTACTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
3UTR-3UTR CCA 90 bp AGGACTTCGGTCTGCCGAATCGACAGCTGCTGCTCCATCGAGGCTCCGGGACGCGGAGAAGGGCAGAGTTaGGGTAGGTTAGTTCCTGAG +
Preference number: 2 (lower is better)
Translates to: RTSVCRIDSCCSIEAPGRGEGQS*GRLVPE
Trigger: CTCAGGAACTAACCTACCCCAACTCTGCCCTTCTCC...GCGTCCCGGAGCCTCGATGGAGCAGCAGCTGTCGATTCGGCAGACCGAAGTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643155.1
3UTR-3UTR CCA 90 bp TGGGCCGAGGACTTCGGTCTGCCGAATCGACAGCTGCTGCTCCATCGAGGCTCCCTGGTTTCTCTTGGATaGGAGAAGGGCAGAGTTGGG +
Preference number: 2 (lower is better)
Translates to: WAEDFGLPNRQLLLHRGSLVSLG*EKGRVG
Trigger: CCCAACTCTGCCCTTCTCCCATCCAAGAGAAACCAG...GGAGCCTCGATGGAGCAGCAGCTGTCGATTCGGCAGACCGAAGTCCTCGGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643155.1
3UTR-3UTR TCA 90 bp GCTCTGGCTCCAGTTCCCGAGGTTTGTTGTCTCCTCACCCCCAGCTGCCAAGCACCCTCCCTGGCATTCTaGTACACTCACATCACTGGC +
Preference number: 2 (lower is better)
Translates to: ALAPVPEVCCLLTPSCQAPSLAF*YTHITG
Trigger: GCCAGTGATGTGAGTGTATCAGAATGCCAGGGAGGG...TGCTTGGCAGCTGGGGGTGAGGAGACAACAAACCTCGGGAACTGGAGCCAGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
3UTR-3UTR GCA 90 bp GCTCTGGCTCCAGTTCCCGAGGTTTGTTGTCTCCTCACCCCCAGCTGCCAAGCAAGCCCCAGTGACTGCTaGCCGATACCCACTGTCTAT +
Preference number: 2 (lower is better)
Translates to: ALAPVPEVCCLLTPSCQASPSDC*PIPTVY
Trigger: ATAGACAGTGGGTATCGGGCAGCAGTCACTGGGGCT...TGCTTGGCAGCTGGGGGTGAGGAGACAACAAACCTCGGGAACTGGAGCCAGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
3UTR-3UTR GCA 90 bp GCTGCTCCATCGAGGCTCCGGGACGCCCGTTTACTTGCTGTACGCTCGAAGTGTACAGGGCAGACGTCCTaGAACTATGTCCTGCCGAAG +
Preference number: 2 (lower is better)
Translates to: AAPSRLRDARLLAVRSKCTGQTS*NYVLPK
Trigger: CTTCGGCAGGACATAGTTGCAGGACGTCTGCCCTGT...ACACTTCGAGCGTACAGCAAGTAAACGGGCGTCCCGGAGCCTCGATGGAGCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643155.1
3UTR-3UTR CCA 90 bp AGCTGCTGCTCCATCGAGGCTCCGGGACGCCCGTTTACTTGCTGTACGCTCGAACCTTCCATGCTTCTGTaGGCTCTGGCTCAGCTTGCT +
Preference number: 2 (lower is better)
Translates to: SCCSIEAPGRPFTCCTLEPSMLL*ALAQLA
Trigger: AGCAAGCTGAGCCAGAGCCCACAGAAGCATGGAAGG...TTCGAGCGTACAGCAAGTAAACGGGCGTCCCGGAGCCTCGATGGAGCAGCAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
3UTR-3UTR GCA 90 bp GTTGGGAGAAGCAGCTTTAGACATTTCTCTTGCTCACTGCCCTTGAGCCCCAGTCCAGGAGGCGGAGGTTaGAGTGAGCCGAGATCGCGC +
Preference number: 2 (lower is better)
Translates to: VGRSSFRHFSCSLPLSPSPGGGG*SEPRSR
Trigger: GCGCGATCTCGGCTCACTGCAACCTCCGCCTCCTGG...ACTGGGGCTCAAGGGCAGTGAGCAAGAGAAATGTCTAAAGCTGCTTCTCCCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR-3UTR CCA 90 bp GCTCTGGCTCCAGTTCCCGAGGTTTGTTGTCTCCTCACCCCCAGCTGCCAAGCACTGGTTTCTCTTGGATaGGAGAAGGGCAGAGTTGGG +
Preference number: 2 (lower is better)
Translates to: ALAPVPEVCCLLTPSCQALVSLG*EKGRVG
Trigger: CCCAACTCTGCCCTTCTCCCATCCAAGAGAAACCAG...TGCTTGGCAGCTGGGGGTGAGGAGACAACAAACCTCGGGAACTGGAGCCAGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
3UTR-3UTR CCA 90 bp GCTCTGGCTCCAGTTCCCGAGGTTTGTTGTCTCCTCACCCCCAGCTGCCAAGCAAGGCAGTGGAGACTTTaGACGGTGTTGGGAGAAGCA +
Preference number: 2 (lower is better)
Translates to: ALAPVPEVCCLLTPSCQARQWRL*TVLGEA
Trigger: TGCTTCTCCCAACACCGTCCAAAGTCTCCACTGCCT...TGCTTGGCAGCTGGGGGTGAGGAGACAACAAACCTCGGGAACTGGAGCCAGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
3UTR-3UTR CCA 90 bp GCTCTGGCTCCAGTTCCCGAGGTTTGTTGTCTCCTCACCCCCAGCTGCCAAGCAAAAGGGGAAGAGGCCTaGAAGGACACCCATCTTGCT +
Preference number: 2 (lower is better)
Translates to: ALAPVPEVCCLLTPSCQAKGEEA*KDTHLA
Trigger: AGCAAGATGGGTGTCCTTCCAGGCCTCTTCCCCTTT...TGCTTGGCAGCTGGGGGTGAGGAGACAACAAACCTCGGGAACTGGAGCCAGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
3UTR CAA 90 bp TGTAAGCTGCATTTCTTGTCACCACTCCTGGCAACACGACCAGGCTaGGGCACTACCCCAAAGCCCACCTTTCAGACCCTCTGCCCACAG +
Preference number: 2 (lower is better)
Translates to: CKLHFLSPLLATRPG*GTTPKPTFQTLCPQ
Trigger: CTGTGGGCAGAGGGTCTGAAAGGTGGGCTTTGGGGTAGTGCCCAAGCCTGGTCGTGTTGCCAGGAGTGGTGACAAGAAATGCAGCTTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
3UTR-3UTR TCA 90 bp TCGACAGCTGCTGCTCCATCGAGGCTCCGGGACGCCCGTTTACTTGCTGTACGCAATCTGGATCTTCTCTaGGTTCTTCCTGAGCAGGAC +
Preference number: 2 (lower is better)
Translates to: STAAAPSRLRDARLLAVRNLDLL*VLPEQD
Trigger: GTCCTGCTCAGGAAGAACTCAGAGAAGATCCAGATT...GCGTACAGCAAGTAAACGGGCGTCCCGGAGCCTCGATGGAGCAGCAGCTGTCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643155.1
3UTR-3UTR GCA 90 bp GGTAGCTCTTCCTACAGGCCATCTGGCCATCAGGCAGTGGGCATGCACTACATGCTGAGGCAAGAGAACTaGTTGAACCCAGGAGGCGGA +
Preference number: 2 (lower is better)
Translates to: GSSSYRPSGHQAVGMHYMLRQEN*LNPGGG
Trigger: TCCGCCTCCTGGGTTCAAGCAGTTCTCTTGCCTCAG...CATGTAGTGCATGCCCACTGCCTGATGGCCAGATGGCCTGTAGGAAGAGCTACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
3UTR-3UTR GCA 90 bp GCTGCTCCATCGAGGCTCCGGGACGCCCGTTTACTTGCTGTACGCTCGAAGTGTATGGTACTTTCATACTaGTCTTGCTGCCAGGCACGG +
Preference number: 2 (lower is better)
Translates to: AAPSRLRDARLLAVRSKCMVLSY*SCCQAR
Trigger: CCGTGCCTGGCAGCAAGAGCAGTATGAAAGTACCAT...ACACTTCGAGCGTACAGCAAGTAAACGGGCGTCCCGGAGCCTCGATGGAGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648891.1
3UTR-3UTR GCA 90 bp CTCTGGCTCAGCTTGCTCAGGTGGCTCGTCTTCCTTTTTCACTTCAGCCTTCACGGCTCTGGCTCAGCTTaGTCAGGTGGCTCGTCTTCC +
Preference number: 2 (lower is better)
Translates to: LWLSLLRWLVFLFHFSLHGSGSA*SGGSSS
Trigger: GGAAGACGAGCCACCTGAGCAAGCTGAGCCAGAGCC...GTGAAGGCTGAAGTGAAAAAGGAAGACGAGCCACCTGAGCAAGCTGAGCCAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
3UTR-3UTR CCA 90 bp GGTAGCTCTTCCTACAGGCCATCTGGCCATCAGGCAGTGGGCATGCACTACATGGGGAATGAGCAGGGCTaGGGCTTATACCCCTTGTCA +
Preference number: 2 (lower is better)
Translates to: GSSSYRPSGHQAVGMHYMGNEQG*GLYPLS
Trigger: TGACAAGGGGTATAAGCCCCAGCCCTGCTCATTCCC...CATGTAGTGCATGCCCACTGCCTGATGGCCAGATGGCCTGTAGGAAGAGCTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
3UTR-3UTR TCA 90 bp GCATCTTTCCGAGGTCTGTGGATCAGGGCTGGTGCCCTCCCTGGCATTCTGATAGGCTTCCAACACAGCTaGCAAGAGTCCTTGGAGGAT +
Preference number: 2 (lower is better)
Translates to: ASFRGLWIRAGALPGILIGFQHS*QESLED
Trigger: ATCCTCCAAGGACTCTTGTCAGCTGTGTTGGAAGCC...TATCAGAATGCCAGGGAGGGCACCAGCCCTGATCCACAGACCTCGGAAAGATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR-3UTR TCA 90 bp GCTCTGGCTCCAGTTCCCGAGGTTTGTTGTCTCCTCACCCCCAGCTGCCAAGCACCTTGTCATTTGGGATaGAAGAAAGGCCCAGGATCA +
Preference number: 2 (lower is better)
Translates to: ALAPVPEVCCLLTPSCQAPCHLG*KKGPGS
Trigger: TGATCCTGGGCCTTTCTTTCATCCCAAATGACAAGG...TGCTTGGCAGCTGGGGGTGAGGAGACAACAAACCTCGGGAACTGGAGCCAGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
3UTR-3UTR TCA 90 bp GCAGGTGCAGAAGTGGGCCGAGGACTTCGGTCTGCCGAATCGACAGCTGCTGCTTCTCTGAGTTCTTCCTaGGCAGGACTTTTAACGATG +
Preference number: 2 (lower is better)
Translates to: AGAEVGRGLRSAESTAAASLSSS*AGLLTM
Trigger: CATCGTTAAAAGTCCTGCTCAGGAAGAACTCAGAGA...AGCAGCAGCTGTCGATTCGGCAGACCGAAGTCCTCGGCCCACTTCTGCACCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643155.1
3UTR-3UTR GCA 90 bp GAAGCTGGAACTGGGATTCTAAGGAGCCTTGAGGCCAATGTGTTTGTGGGAAGCCCGAGATCGCGCCACTaGACTCCAGCTTGGGCAACA +
Preference number: 2 (lower is better)
Translates to: EAGTGILRSLEANVFVGSPRSRH*TPAWAT
Trigger: TGTTGCCCAAGCTGGAGTGCAGTGGCGCGATCTCGG...GCTTCCCACAAACACATTGGCCTCAAGGCTCCTTAGAATCCCAGTTCCAGCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR-3UTR GCA 90 bp AGCTGCTGCTCCATCGAGGCTCCGGGACGCCCGTTTACTTGCTGTACGCTCGAAATGGTACTTTCATACTaGTCTTGCTCTCCAGGCCGA +
Preference number: 2 (lower is better)
Translates to: SCCSIEAPGRPFTCCTLEMVLSY*SCSPGR
Trigger: TCGGCCTGGAGAGCAAGAGCAGTATGAAAGTACCAT...TTCGAGCGTACAGCAAGTAAACGGGCGTCCCGGAGCCTCGATGGAGCAGCAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642643.1
ENST00000643155.1
3UTR-3UTR CCA 90 bp GGTAGCTCTTCCTACAGGCCATCTGGCCATCAGGCAGTGGGCATGCACTACATGCTGGTTTCTCTTGGATaGGAGAAGGGCAGAGTTGGG +
Preference number: 2 (lower is better)
Translates to: GSSSYRPSGHQAVGMHYMLVSLG*EKGRVG
Trigger: CCCAACTCTGCCCTTCTCCCATCCAAGAGAAACCAG...CATGTAGTGCATGCCCACTGCCTGATGGCCAGATGGCCTGTAGGAAGAGCTACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
3UTR-3UTR CCA 90 bp AGCTGCTGCTCCATCGAGGCTCCGGGACGCCCGTTTACTTGCTGTACGCTCGAAACTAGGCCGTGGTTCTaGTACAGACTCCATGAAGTT +
Preference number: 2 (lower is better)
Translates to: SCCSIEAPGRPFTCCTLETRPWF*YRLHEV
Trigger: AACTTCATGGAGTCTGTACCAGAACCACGGCCTAGT...TTCGAGCGTACAGCAAGTAAACGGGCGTCCCGGAGCCTCGATGGAGCAGCAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
3UTR CAA 90 bp GGGGATAAGACTAGGGAGAGACGCGGAAGTCCCACTAAGCTGGCTTaGGCTTCCAACACAGCTGACAAGAGTCCTTGGAGGATTTCCCGA +
Preference number: 2 (lower is better)
Translates to: GDKTRERRGSPTKLA*ASNTADKSPWRISR
Trigger: TCGGGAAATCCTCCAAGGACTCTTGTCAGCTGTGTTGGAAGCCAAAGCCAGCTTAGTGGGACTTCCGCGTCTCTCCCTAGTCTTATCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR-3UTR TCA 90 bp GAAGCTGGAACTGGGATTCTAAGGAGCCTTGAGGCCAATGTGTTTGTGGGAAGCGGGGGAGCACTTAGCTaGGCCACTGCTTCTGATGAG +
Preference number: 2 (lower is better)
Translates to: EAGTGILRSLEANVFVGSGGALS*ATASDE
Trigger: CTCATCAGAAGCAGTGGCTCAGCTAAGTGCTCCCCC...GCTTCCCACAAACACATTGGCCTCAAGGCTCCTTAGAATCCCAGTTCCAGCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR-3UTR TCA 90 bp GCTCTGGCTCCAGTTCCCGAGGTTTGTTGTCTCCTCACCCCCAGCTGCCAAGCACAGGCAGGTTCCTGTTaGGAGAAGAAAGGTCAAAAA +
Preference number: 2 (lower is better)
Translates to: ALAPVPEVCCLLTPSCQAQAGSC*EKKGQK
Trigger: TTTTTGACCTTTCTTCTCTCAACAGGAACCTGCCTG...TGCTTGGCAGCTGGGGGTGAGGAGACAACAAACCTCGGGAACTGGAGCCAGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
3UTR-3UTR TCA 90 bp TGGGCCGAGGACTTCGGTCTGCCGAATCGACAGCTGCTGCTCCATCGAGGCTCCCCTGAAGGCACAGTTTaGATACAAATAAACCTCTAC +
Preference number: 2 (lower is better)
Translates to: WAEDFGLPNRQLLLHRGSPEGTV*IQINLY
Trigger: GTAGAGGTTTATTTGTATTCAAACTGTGCCTTCAGG...GGAGCCTCGATGGAGCAGCAGCTGTCGATTCGGCAGACCGAAGTCCTCGGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642643.1
ENST00000648891.1
3UTR-3UTR GCA 90 bp TCGACAGCTGCTGCTCCATCGAGGCTCCGGGACGCCCGTTTACTTGCTGTACGCCTAGCGCAAGAAATTTaGTTTTGGGAATGGTGTCTG +
Preference number: 2 (lower is better)
Translates to: STAAAPSRLRDARLLAVRLAQEI*FWEWCL
Trigger: CAGACACCATTCCCAAAAGCAAATTTCTTGCGCTAG...GCGTACAGCAAGTAAACGGGCGTCCCGGAGCCTCGATGGAGCAGCAGCTGTCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
3UTR-3UTR GCA 90 bp CTGAGTAATGGCAGGTGCAGAAGTGGGCCGAGGACTTCGGTCTGCCGAATCGACATGGTACTTTCATACTaGTCTTGCTCTCCAGGCCGA +
Preference number: 2 (lower is better)
Translates to: LSNGRCRSGPRTSVCRIDMVLSY*SCSPGR
Trigger: TCGGCCTGGAGAGCAAGAGCAGTATGAAAGTACCAT...GTCGATTCGGCAGACCGAAGTCCTCGGCCCACTTCTGCACCTGCCATTACTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642643.1
ENST00000643155.1
3UTR-3UTR CCA 90 bp GCATCTTTCCGAGGTCTGTGGATCAGGGCTGGTGCCCTCCCTGGCATTCTGATACCACTAAGCTGGCTTTaGCTTCCAACACAGCTGACA +
Preference number: 2 (lower is better)
Translates to: ASFRGLWIRAGALPGILIPLSWL*LPTQLT
Trigger: TGTCAGCTGTGTTGGAAGCCAAAGCCAGCTTAGTGG...TATCAGAATGCCAGGGAGGGCACCAGCCCTGATCCACAGACCTCGGAAAGATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR-3UTR CCA 90 bp GCATCTTTCCGAGGTCTGTGGATCAGGGCTGGTGCCCTCCCTGGCATTCTGATAGAAGTCCCACTAAGCTaGCTTTGGCTTCCAACACAG +
Preference number: 2 (lower is better)
Translates to: ASFRGLWIRAGALPGILIEVPLS*LWLPTQ
Trigger: CTGTGTTGGAAGCCAAAGCCAGCTTAGTGGGACTTC...TATCAGAATGCCAGGGAGGGCACCAGCCCTGATCCACAGACCTCGGAAAGATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR-3UTR CCA 90 bp GAAGCTGGAACTGGGATTCTAAGGAGCCTTGAGGCCAATGTGTTTGTGGGAAGCATTTGCTGGGCGTGGTaGTGTGCGCCTGTCATCCCA +
Preference number: 2 (lower is better)
Translates to: EAGTGILRSLEANVFVGSICWAW*CAPVIP
Trigger: TGGGATGACAGGCGCACACCACCACGCCCAGCAAAT...GCTTCCCACAAACACATTGGCCTCAAGGCTCCTTAGAATCCCAGTTCCAGCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR-3UTR CCA 90 bp CTCTGGCTCAGCTTGCTCAGGTGGCTCGTCTTCCTTTTTCACTTCAGCCTTCACCCTTCCATGCTTCTGTaGGCTCTGGCTCAGCTTGCT +
Preference number: 2 (lower is better)
Translates to: LWLSLLRWLVFLFHFSLHPSMLL*ALAQLA
Trigger: AGCAAGCTGAGCCAGAGCCCACAGAAGCATGGAAGG...GTGAAGGCTGAAGTGAAAAAGGAAGACGAGCCACCTGAGCAAGCTGAGCCAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
3UTR CAA 90 bp CTAAGCCTGTCCCACGTCCCACCTGGGCTCTTTCCCTCCCTCCTGTaGTTCATGTCTCACATGGGTACCAAAAGAAAAATGCACACACCC +
Preference number: 2 (lower is better)
Translates to: LSLSHVPPGLFPSLL*FMSHMGTKRKMHTP
Trigger: GGGTGTGTGCATTTTTCTTTTGGTACCCATGTGAGACATGAACAACAGGAGGGAGGGAAAGAGCCCAGGTGGGACGTGGGACAGGCTTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR-3UTR TCA 90 bp AAAAATGCACACACCCGAAATGAGTTCAAACCAGCCGAAACAAAACTCAGGCAGGCCCTTGAGCCCCAGTaGCTGCTGCCCGATACCCAC +
Preference number: 2 (lower is better)
Translates to: KNAHTRNEFKPAETKLRQALEPQ*LLPDTH
Trigger: GTGGGTATCGGGCAGCAGTCACTGGGGCTCAAGGGC...CTGCCTGAGTTTTGTTTCGGCTGGTTTGAACTCATTTCGGGTGTGTGCATTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR-3UTR TCA 90 bp TCGACAGCTGCTGCTCCATCGAGGCTCCGGGACGCCCGTTTACTTGCTGTACGCAAACTTTCTAGTCCCTaGAGGCACAGTTTGAATACA +
Preference number: 2 (lower is better)
Translates to: STAAAPSRLRDARLLAVRKLSSP*RHSLNT
Trigger: TGTATTCAAACTGTGCCTTCAGGGACTAGAAAGTTT...GCGTACAGCAAGTAAACGGGCGTCCCGGAGCCTCGATGGAGCAGCAGCTGTCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642643.1
ENST00000648891.1
3UTR-3UTR TCA 90 bp CAGAAGTGGGCCGAGGACTTCGGTCTGCCGAATCGACAGCTGCTGCTCCATCGAGGTAACTGGGAAGTTTaGATCCGATGGTACTTTCAT +
Preference number: 2 (lower is better)
Translates to: QKWAEDFGLPNRQLLLHRGNWEV*IRWYFH
Trigger: ATGAAAGTACCATCGGATTCAAACTTCCCAGTTACC...TCGATGGAGCAGCAGCTGTCGATTCGGCAGACCGAAGTCCTCGGCCCACTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
3UTR-3UTR GCA 90 bp CCCTTGTCATGTGGTGTCTTGTGGGGAGAACGGCTCCTAAAAGTCAATTCCTTGCTCAGCAGAGGGCTCTaGCTTACCAAAACCACCCGC +
Preference number: 2 (lower is better)
Translates to: PLSCGVLWGERLLKVNSLLSRGL*LTKTTR
Trigger: GCGGGTGGTTTTGGTAAGGCAGAGCCCTCTGCTGAG...CAAGGAATTGACTTTTAGGAGCCGTTCTCCCCACAAGACACCACATGACAAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR-3UTR GCA 90 bp GGGCTCTTTCCCTCCCTCCTGTTGTTCATGTCTCACATGGGTACCAAAAGAAAACCGAGATCGCGCCACTaGACTCCAGCTTGGGCAACA +
Preference number: 2 (lower is better)
Translates to: GLFPSLLLFMSHMGTKRKPRSRH*TPAWAT
Trigger: TGTTGCCCAAGCTGGAGTGCAGTGGCGCGATCTCGG...TTTTCTTTTGGTACCCATGTGAGACATGAACAACAGGAGGGAGGGAAAGAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR-3UTR GCA 90 bp CTCTTTCCCTCCCTCCTGTTGTTCATGTCTCACATGGGTACCAAAAGAAAAATGCCAGGAGGCGGAGGTTaGAGTGAGCCGAGATCGCGC +
Preference number: 2 (lower is better)
Translates to: LFPSLLLFMSHMGTKRKMPGGGG*SEPRSR
Trigger: GCGCGATCTCGGCTCACTGCAACCTCCGCCTCCTGG...CATTTTTCTTTTGGTACCCATGTGAGACATGAACAACAGGAGGGAGGGAAAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR-3UTR GCA 90 bp GTTGGGAGAAGCAGCTTTAGACATTTCTCTTGCTCACTGCCCTTGAGCCCCAGTCTGAGGCAAGAGAACTaGTTGAACCCAGGAGGCGGA +
Preference number: 2 (lower is better)
Translates to: VGRSSFRHFSCSLPLSPSLRQEN*LNPGGG
Trigger: TCCGCCTCCTGGGTTCAAGCAGTTCTCTTGCCTCAG...ACTGGGGCTCAAGGGCAGTGAGCAAGAGAAATGTCTAAAGCTGCTTCTCCCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR-3UTR GCA 90 bp CAATTGGTCATGTGGACAAAGTACTCACTCCTTCTCCTGTGGGGATTTGCCCATCCGAGGACTTCGGTCTaGCGAATCGACAGCTGCTGC +
Preference number: 2 (lower is better)
Translates to: QLVMWTKYSLLLLWGFAHPRTSV*RIDSCC
Trigger: GCAGCAGCTGTCGATTCGGCAGACCGAAGTCCTCGG...ATGGGCAAATCCCCACAGGAGAAGGAGTGAGTACTTTGTCCACATGACCAATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642643.1
ENST00000648891.1
3UTR-3UTR GCA 90 bp AGCTGCTGCTCCATCGAGGCTCCGGGACGCCCGTTTACTTGCTGTACGCTCGAAGACCTGTATGACTTATaGAGTTCCATGACCTTCTCT +
Preference number: 2 (lower is better)
Translates to: SCCSIEAPGRPFTCCTLEDLYDL*SSMTFS
Trigger: AGAGAAGGTCATGGAACTGCATAAGTCATACAGGTC...TTCGAGCGTACAGCAAGTAAACGGGCGTCCCGGAGCCTCGATGGAGCAGCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643155.1
3UTR-3UTR GCA 90 bp AAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAATACATACTCTGAGATCGCGCCACTaGACTCCAGCCTGGGGGACA +
Preference number: 2 (lower is better)
Translates to: KAGFGQSIATPLYPTIHTLRSRH*TPAWGT
Trigger: TGTCCCCCAGGCTGGAGTGCAGTGGCGCGATCTCAG...AGTATGTATTGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
3UTR-3UTR GCA 90 bp AAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAATACATACTCCGGGAGGCAGAGGTTaGAGTGAGCTGAGATCGCGC +
Preference number: 2 (lower is better)
Translates to: KAGFGQSIATPLYPTIHTPGGRG*SELRSR
Trigger: GCGCGATCTCAGCTCACTGCAACCTCTGCCTCCCGG...AGTATGTATTGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
3UTR-3UTR CCA 90 bp GAAGCTGGAACTGGGATTCTAAGGAGCCTTGAGGCCAATGTGTTTGTGGGAAGCGGCTGGTGCCCTCCCTaGCATTCTGATACACTCACA +
Preference number: 2 (lower is better)
Translates to: EAGTGILRSLEANVFVGSGWCPP*HSDTLT
Trigger: TGTGAGTGTATCAGAATGCCAGGGAGGGCACCAGCC...GCTTCCCACAAACACATTGGCCTCAAGGCTCCTTAGAATCCCAGTTCCAGCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR-3UTR CCA 90 bp GTTGGGAGAAGCAGCTTTAGACATTTCTCTTGCTCACTGCCCTTGAGCCCCAGTGGCTGGTGCCCTCCCTaGCATTCTGATACACTCACA +
Preference number: 2 (lower is better)
Translates to: VGRSSFRHFSCSLPLSPSGWCPP*HSDTLT
Trigger: TGTGAGTGTATCAGAATGCCAGGGAGGGCACCAGCC...ACTGGGGCTCAAGGGCAGTGAGCAAGAGAAATGTCTAAAGCTGCTTCTCCCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR-3UTR CCA 90 bp CCCTTGTCATGTGGTGTCTTGTGGGGAGAACGGCTCCTAAAAGTCAATTCCTTGTCTTTCCGAGGTCTGTaGATCAGGGCTGGTGCCCTC +
Preference number: 2 (lower is better)
Translates to: PLSCGVLWGERLLKVNSLSFRGL*IRAGAL
Trigger: GAGGGCACCAGCCCTGATCCACAGACCTCGGAAAGA...CAAGGAATTGACTTTTAGGAGCCGTTCTCCCCACAAGACACCACATGACAAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR-3UTR CCA 90 bp GAAGCTGGAACTGGGATTCTAAGGAGCCTTGAGGCCAATGTGTTTGTGGGAAGCGGGAATGAGCAGGGCTaGGGCTTATACCCCTTGTCA +
Preference number: 2 (lower is better)
Translates to: EAGTGILRSLEANVFVGSGNEQG*GLYPLS
Trigger: TGACAAGGGGTATAAGCCCCAGCCCTGCTCATTCCC...GCTTCCCACAAACACATTGGCCTCAAGGCTCCTTAGAATCCCAGTTCCAGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR-3UTR CCA 90 bp GGTAGCTCTTCCTACAGGCCATCTGGCCATCAGGCAGTGGGCATGCACTACATGACAAAACTCAGGCAGTaGAGACTTTGGACGGTGTTG +
Preference number: 2 (lower is better)
Translates to: GSSSYRPSGHQAVGMHYMTKLRQ*RLWTVL
Trigger: CAACACCGTCCAAAGTCTCCACTGCCTGAGTTTTGT...CATGTAGTGCATGCCCACTGCCTGATGGCCAGATGGCCTGTAGGAAGAGCTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
3UTR-3UTR CCA 90 bp AGGTGCAGAAGTGGGCCGAGGACTTCGGTCTGCCGAATCGACAGCTGCTGCTCCCTAATCATCTACTGGTaGCTCCAAATAGCTCCTATA +
Preference number: 2 (lower is better)
Translates to: RCRSGPRTSVCRIDSCCSLIIYW*LQIAPI
Trigger: TATAGGAGCTATTTGGAGCCACCAGTAGATGATTAG...GGAGCAGCAGCTGTCGATTCGGCAGACCGAAGTCCTCGGCCCACTTCTGCACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642643.1
ENST00000648891.1
3UTR CAA 90 bp GGTGTTGGGAGAAGCAGCTTTAGACATTTCTCTTGCTCACTGCCCTaGAGCCCCAGTGACTGCTGCCCGATACCCACTGTCTATTTTAGG +
Preference number: 2 (lower is better)
Translates to: GVGRSSFRHFSCSLP*SPSDCCPIPTVYFR
Trigger: CCTAAAATAGACAGTGGGTATCGGGCAGCAGTCACTGGGGCTCAAGGGCAGTGAGCAAGAGAAATGTCTAAAGCTGCTTCTCCCAACACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR CAA 90 bp CAGTTAGGCTCCCTGAGCCCTCGGCTTATAAATACAGGTCTTGCTTaGTGGGTGGGTGCCAGAGTCCTCATGTGGCTTGGAGGAAATCTT +
Preference number: 2 (lower is better)
Translates to: QLGSLSPRLINTGLA*WVGARVLMWLGGNL
Trigger: AAGATTTCCTCCAAGCCACATGAGGACTCTGGCACCCACCCACAAAGCAAGACCTGTATTTATAAGCCGAGGGCTCAGGGAGCCTAACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
3UTR-3UTR TCA 90 bp GTTGGGAGAAGCAGCTTTAGACATTTCTCTTGCTCACTGCCCTTGAGCCCCAGTGGCTTCCAACACAGCTaGCAAGAGTCCTTGGAGGAT +
Preference number: 2 (lower is better)
Translates to: VGRSSFRHFSCSLPLSPSGFQHS*QESLED
Trigger: ATCCTCCAAGGACTCTTGTCAGCTGTGTTGGAAGCC...ACTGGGGCTCAAGGGCAGTGAGCAAGAGAAATGTCTAAAGCTGCTTCTCCCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR-3UTR TCA 90 bp GGGCTCTTTCCCTCCCTCCTGTTGTTCATGTCTCACATGGGTACCAAAAGAAAAACAGACCTCAGCTGGTaGGTGGGAATGAGCAGGGCT +
Preference number: 2 (lower is better)
Translates to: GLFPSLLLFMSHMGTKRKTDLSW*VGMSRA
Trigger: AGCCCTGCTCATTCCCACTCACCAGCTGAGGTCTGT...TTTTCTTTTGGTACCCATGTGAGACATGAACAACAGGAGGGAGGGAAAGAGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR-3UTR TCA 90 bp GGGCTCTTTCCCTCCCTCCTGTTGTTCATGTCTCACATGGGTACCAAAAGAAAAGGCAAGAGAACTGCTTaGACCCAGGAGGCGGAGGTT +
Preference number: 2 (lower is better)
Translates to: GLFPSLLLFMSHMGTKRKGKRTA*TQEAEV
Trigger: AACCTCCGCCTCCTGGGTTCAAGCAGTTCTCTTGCC...TTTTCTTTTGGTACCCATGTGAGACATGAACAACAGGAGGGAGGGAAAGAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR-3UTR TCA 90 bp CTGAGTAATGGCAGGTGCAGAAGTGGGCCGAGGACTTCGGTCTGCCGAATCGACGGTAACTGGGAAGTTTaGATCCGATGGTACTTTCAT +
Preference number: 2 (lower is better)
Translates to: LSNGRCRSGPRTSVCRIDGNWEV*IRWYFH
Trigger: ATGAAAGTACCATCGGATTCAAACTTCCCAGTTACC...GTCGATTCGGCAGACCGAAGTCCTCGGCCCACTTCTGCACCTGCCATTACTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
3UTR-3UTR GCA 90 bp GGGCTCTTTCCCTCCCTCCTGTTGTTCATGTCTCACATGGGTACCAAAAGAAAACTCAGCAGAGGGCTCTaGCTTACCAAAACCACCCGC +
Preference number: 2 (lower is better)
Translates to: GLFPSLLLFMSHMGTKRKLSRGL*LTKTTR
Trigger: GCGGGTGGTTTTGGTAAGGCAGAGCCCTCTGCTGAG...TTTTCTTTTGGTACCCATGTGAGACATGAACAACAGGAGGGAGGGAAAGAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR-3UTR GCA 90 bp GCTCTGGCTCCAGTTCCCGAGGTTTGTTGTCTCCTCACCCCCAGCTGCCAAGCAGCTTTTGGCCCAAAGTaGCTATTTTTCTGTGAGATT +
Preference number: 2 (lower is better)
Translates to: ALAPVPEVCCLLTPSCQAAFGPK*LFFCEI
Trigger: AATCTCACAGAAAAATAGGCACTTTGGGCCAAAAGC...TGCTTGGCAGCTGGGGGTGAGGAGACAACAAACCTCGGGAACTGGAGCCAGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
3UTR-3UTR GCA 90 bp TTCACAATTGGTCATGTGGACAAAGTACTCACTCCTTCTCCTGTGGGGATTTGCGGCTCTGGCTCAGCTTaGTCAGGTGGCTCGTCTTCC +
Preference number: 2 (lower is better)
Translates to: FTIGHVDKVLTPSPVGICGSGSA*SGGSSS
Trigger: GGAAGACGAGCCACCTGAGCAAGCTGAGCCAGAGCC...GCAAATCCCCACAGGAGAAGGAGTGAGTACTTTGTCCACATGACCAATTGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642643.1
ENST00000648891.1
3UTR-3UTR GCA 90 bp CAGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAGAAGTTCAATGCCGGGAGGCAGAGGTTaGAGTGAGCTGAGATCGCGC +
Preference number: 2 (lower is better)
Translates to: QRASYSNNTVEAKDRSSMPGGRG*SELRSR
Trigger: GCGCGATCTCAGCTCACTGCAACCTCTGCCTCCCGG...CATTGAACTTCTGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
3UTR-3UTR CCA 90 bp GAAGCTGGAACTGGGATTCTAAGGAGCCTTGAGGCCAATGTGTTTGTGGGAAGCGGAGAAGGGCAGAGTTaGGGTAGGTTAGTTCCTGAG +
Preference number: 2 (lower is better)
Translates to: EAGTGILRSLEANVFVGSGEGQS*GRLVPE
Trigger: CTCAGGAACTAACCTACCCCAACTCTGCCCTTCTCC...GCTTCCCACAAACACATTGGCCTCAAGGCTCCTTAGAATCCCAGTTCCAGCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR-3UTR CCA 90 bp GGGCTCTTTCCCTCCCTCCTGTTGTTCATGTCTCACATGGGTACCAAAAGAAAATCTGTGGATCAGGGCTaGTGCCCTCCCTGGCATTCT +
Preference number: 2 (lower is better)
Translates to: GLFPSLLLFMSHMGTKRKSVDQG*CPPWHS
Trigger: AGAATGCCAGGGAGGGCACCAGCCCTGATCCACAGA...TTTTCTTTTGGTACCCATGTGAGACATGAACAACAGGAGGGAGGGAAAGAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR-3UTR CCA 90 bp GGGCTCTTTCCCTCCCTCCTGTTGTTCATGTCTCACATGGGTACCAAAAGAAAATCTTTCCGAGGTCTGTaGATCAGGGCTGGTGCCCTC +
Preference number: 2 (lower is better)
Translates to: GLFPSLLLFMSHMGTKRKSFRGL*IRAGAL
Trigger: GAGGGCACCAGCCCTGATCCACAGACCTCGGAAAGA...TTTTCTTTTGGTACCCATGTGAGACATGAACAACAGGAGGGAGGGAAAGAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR-3UTR CCA 90 bp GGGCTCTTTCCCTCCCTCCTGTTGTTCATGTCTCACATGGGTACCAAAAGAAAAATTTGCTGGGCGTGGTaGTGTGCGCCTGTCATCCCA +
Preference number: 2 (lower is better)
Translates to: GLFPSLLLFMSHMGTKRKICWAW*CAPVIP
Trigger: TGGGATGACAGGCGCACACCACCACGCCCAGCAAAT...TTTTCTTTTGGTACCCATGTGAGACATGAACAACAGGAGGGAGGGAAAGAGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR-3UTR CCA 90 bp GAAGCTGGAACTGGGATTCTAAGGAGCCTTGAGGCCAATGTGTTTGTGGGAAGCAAAATTTGCTGGGCGTaGTGGTGTGCGCCTGTCATC +
Preference number: 2 (lower is better)
Translates to: EAGTGILRSLEANVFVGSKICWA*WCAPVI
Trigger: GATGACAGGCGCACACCACCACGCCCAGCAAATTTT...GCTTCCCACAAACACATTGGCCTCAAGGCTCCTTAGAATCCCAGTTCCAGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR-3UTR CCA 90 bp CTCTGGCTCAGCTTGCTCAGGTGGCTCGTCTTCCTTTTTCACTTCAGCCTTCACCTCAGCTTGCTCAGGTaGCTCGTCTTCCTTTTTCAC +
Preference number: 2 (lower is better)
Translates to: LWLSLLRWLVFLFHFSLHLSLLR*LVFLFH
Trigger: GTGAAAAAGGAAGACGAGCCACCTGAGCAAGCTGAG...GTGAAGGCTGAAGTGAAAAAGGAAGACGAGCCACCTGAGCAAGCTGAGCCAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
3UTR-3UTR TCA 90 bp CTGAGTAATGGCAGGTGCAGAAGTGGGCCGAGGACTTCGGTCTGCCGAATCGACATAATCTTGAAAGTCTaGAGTCTGACTATGGCAGGT +
Preference number: 2 (lower is better)
Translates to: LSNGRCRSGPRTSVCRIDIILKV*SLTMAG
Trigger: ACCTGCCATAGTCAGACTTCAGACTTTCAAGATTAT...GTCGATTCGGCAGACCGAAGTCCTCGGCCCACTTCTGCACCTGCCATTACTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643155.1
3UTR-3UTR TCA 90 bp GGGCTCTTTCCCTCCCTCCTGTTGTTCATGTCTCACATGGGTACCAAAAGAAAACCCTCCCTGGCATTCTaGTACACTCACATCACTGGC +
Preference number: 2 (lower is better)
Translates to: GLFPSLLLFMSHMGTKRKPSLAF*YTHITG
Trigger: GCCAGTGATGTGAGTGTATCAGAATGCCAGGGAGGG...TTTTCTTTTGGTACCCATGTGAGACATGAACAACAGGAGGGAGGGAAAGAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR-3UTR TCA 90 bp GGTAGCTCTTCCTACAGGCCATCTGGCCATCAGGCAGTGGGCATGCACTACATGCAACTTCCATGTCTTTaGCCCAAAGAAGCTCCAAAA +
Preference number: 2 (lower is better)
Translates to: GSSSYRPSGHQAVGMHYMQLPCL*PKEAPK
Trigger: TTTTGGAGCTTCTTTGGGTCAAAGACATGGAAGTTG...CATGTAGTGCATGCCCACTGCCTGATGGCCAGATGGCCTGTAGGAAGAGCTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
3UTR-3UTR TCA 90 bp GCCACATTCCTTGTCATTTGGGATGAAAGAAAGGCCCAGGATCAGACAGAAGTAGGGGGAGCACTTAGCTaGGCCACTGCTTCTGATGAG +
Preference number: 2 (lower is better)
Translates to: ATFLVIWDERKAQDQTEVGGALS*ATASDE
Trigger: CTCATCAGAAGCAGTGGCTCAGCTAAGTGCTCCCCC...TACTTCTGTCTGATCCTGGGCCTTTCTTTCATCCCAAATGACAAGGAATGTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR-3UTR TCA 90 bp GGTAGCTCTTCCTACAGGCCATCTGGCCATCAGGCAGTGGGCATGCACTACATGACCAGCCTAACAAGGTaGAATCCCGTTTCTACTAAA +
Preference number: 2 (lower is better)
Translates to: GSSSYRPSGHQAVGMHYMTSLTR*NPVSTK
Trigger: TTTAGTAGAAACGGGATTTCACCTTGTTAGGCTGGT...CATGTAGTGCATGCCCACTGCCTGATGGCCAGATGGCCTGTAGGAAGAGCTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
3UTR-3UTR TCA 90 bp CTGAGTAATGGCAGGTGCAGAAGTGGGCCGAGGACTTCGGTCTGCCGAATCGACTTTTTGATCTCCTCTTaGCTCTTGTCTAAATCCTCC +
Preference number: 2 (lower is better)
Translates to: LSNGRCRSGPRTSVCRIDFLISS*LLSKSS
Trigger: GGAGGATTTAGACAAGAGTCAAGAGGAGATCAAAAA...GTCGATTCGGCAGACCGAAGTCCTCGGCCCACTTCTGCACCTGCCATTACTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000643155.1
ENST00000648891.1
3UTR-3UTR TCA 90 bp TCTATACACCAGGCAGGAAAAAGTTGTCTGTCCCTGTACAGCTCAGAAATACTCGGCCGGAGAATTGCTTaGACCCGGGAGGCAGAGGTT +
Preference number: 2 (lower is better)
Translates to: SIHQAGKSCLSLYSSEILGRRIA*TREAEV
Trigger: AACCTCTGCCTCCCGGGTTCAAGCAATTCTCCGGCC...GAGTATTTCTGAGCTGTACAGGGACAGACAACTTTTTCCTGCCTGGTGTATAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
3UTR-3UTR GCA 90 bp GGGCTCTTTCCCTCCCTCCTGTTGTTCATGTCTCACATGGGTACCAAAAGAAAACTGAGGCAAGAGAACTaGTTGAACCCAGGAGGCGGA +
Preference number: 2 (lower is better)
Translates to: GLFPSLLLFMSHMGTKRKLRQEN*LNPGGG
Trigger: TCCGCCTCCTGGGTTCAAGCAGTTCTCTTGCCTCAG...TTTTCTTTTGGTACCCATGTGAGACATGAACAACAGGAGGGAGGGAAAGAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR-3UTR GCA 90 bp GGTAGCTCTTCCTACAGGCCATCTGGCCATCAGGCAGTGGGCATGCACTACATGTCGTTTGATGTAAGCTaGATTTCTTGTCACCACTCC +
Preference number: 2 (lower is better)
Translates to: GSSSYRPSGHQAVGMHYMSFDVS*ISCHHS
Trigger: GGAGTGGTGACAAGAAATGCAGCTTACATCAAACGA...CATGTAGTGCATGCCCACTGCCTGATGGCCAGATGGCCTGTAGGAAGAGCTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
3UTR-3UTR GCA 90 bp GAAGTCAACATGCAAACAGAGGACACATACTTGTCACAAGTGAACTTGAGGTCACTGAGATCGCGCCACTaGACTCCAGCCTGGGGGACA +
Preference number: 2 (lower is better)
Translates to: EVNMQTEDTYLSQVNLRSLRSRH*TPAWGT
Trigger: TGTCCCCCAGGCTGGAGTGCAGTGGCGCGATCTCAG...TGACCTCAAGTTCACTTGTGACAAGTATGTGTCCTCTGTTTGCATGTTGACTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
3UTR-3UTR GCA 90 bp AGAAGTCAACATGCAAACAGAGGACACATACTTGTCACAAGTGAACTTGAGGTCCCGGGAGGCAGAGGTTaGAGTGAGCTGAGATCGCGC +
Preference number: 2 (lower is better)
Translates to: RSQHANRGHILVTSELEVPGGRG*SELRSR
Trigger: GCGCGATCTCAGCTCACTGCAACCTCTGCCTCCCGG...GACCTCAAGTTCACTTGTGACAAGTATGTGTCCTCTGTTTGCATGTTGACTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
3UTR-3UTR CCA 90 bp CCCTTGTCATGTGGTGTCTTGTGGGGAGAACGGCTCCTAAAAGTCAATTCCTTGCTGGTTTCTCTTGGATaGGAGAAGGGCAGAGTTGGG +
Preference number: 2 (lower is better)
Translates to: PLSCGVLWGERLLKVNSLLVSLG*EKGRVG
Trigger: CCCAACTCTGCCCTTCTCCCATCCAAGAGAAACCAG...CAAGGAATTGACTTTTAGGAGCCGTTCTCCCCACAAGACACCACATGACAAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR-3UTR CCA 90 bp GAAGCTGGAACTGGGATTCTAAGGAGCCTTGAGGCCAATGTGTTTGTGGGAAGCCCACTAAGCTGGCTTTaGCTTCCAACACAGCTGACA +
Preference number: 2 (lower is better)
Translates to: EAGTGILRSLEANVFVGSPLSWL*LPTQLT
Trigger: TGTCAGCTGTGTTGGAAGCCAAAGCCAGCTTAGTGG...GCTTCCCACAAACACATTGGCCTCAAGGCTCCTTAGAATCCCAGTTCCAGCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR-3UTR CCA 90 bp GTTGGGAGAAGCAGCTTTAGACATTTCTCTTGCTCACTGCCCTTGAGCCCCAGTGAAGTCCCACTAAGCTaGCTTTGGCTTCCAACACAG +
Preference number: 2 (lower is better)
Translates to: VGRSSFRHFSCSLPLSPSEVPLS*LWLPTQ
Trigger: CTGTGTTGGAAGCCAAAGCCAGCTTAGTGGGACTTC...ACTGGGGCTCAAGGGCAGTGAGCAAGAGAAATGTCTAAAGCTGCTTCTCCCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR-3UTR CCA 90 bp GCCACATTCCTTGTCATTTGGGATGAAAGAAAGGCCCAGGATCAGACAGAAGTATCTTTCCGAGGTCTGTaGATCAGGGCTGGTGCCCTC +
Preference number: 2 (lower is better)
Translates to: ATFLVIWDERKAQDQTEVSFRGL*IRAGAL
Trigger: GAGGGCACCAGCCCTGATCCACAGACCTCGGAAAGA...TACTTCTGTCTGATCCTGGGCCTTTCTTTCATCCCAAATGACAAGGAATGTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR-3UTR CCA 90 bp CCCTTGTCATGTGGTGTCTTGTGGGGAGAACGGCTCCTAAAAGTCAATTCCTTGTTTGGTCTCCTGAGATaGGAGCTAGGGGGAGCACTT +
Preference number: 2 (lower is better)
Translates to: PLSCGVLWGERLLKVNSLFGLLR*ELGGAL
Trigger: AAGTGCTCCCCCTAGCTCCCATCTCAGGAGACCAAA...CAAGGAATTGACTTTTAGGAGCCGTTCTCCCCACAAGACACCACATGACAAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR-3UTR CCA 90 bp GAAGCTGGAACTGGGATTCTAAGGAGCCTTGAGGCCAATGTGTTTGTGGGAAGCATACCCCTTGTCATGTaGTGTCTTGTGGGGAGAACG +
Preference number: 2 (lower is better)
Translates to: EAGTGILRSLEANVFVGSIPLVM*CLVGRT
Trigger: CGTTCTCCCCACAAGACACCACATGACAAGGGGTAT...GCTTCCCACAAACACATTGGCCTCAAGGCTCCTTAGAATCCCAGTTCCAGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR-3UTR CCA 90 bp GCTCTGGCTCCAGTTCCCGAGGTTTGTTGTCTCCTCACCCCCAGCTGCCAAGCATGTTCATGTCTCACATaGGTACCAAAAGAAAAATGC +
Preference number: 2 (lower is better)
Translates to: ALAPVPEVCCLLTPSCQACSCLT*VPKEKC
Trigger: GCATTTTTCTTTTGGTACCCATGTGAGACATGAACA...TGCTTGGCAGCTGGGGGTGAGGAGACAACAAACCTCGGGAACTGGAGCCAGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
3UTR-3UTR CCA 90 bp TTTGAGCTGTCAGCAAGACTCCTGGGTCCAAGTCTCCACTGTTGTCGTCAGTCTGGTCACCATTTGAGGTaGGTACTGTCACCTCGATGT +
Preference number: 2 (lower is better)
Translates to: FELSARLLGPSLHCCRQSGHHLR*VLSPRC
Trigger: ACATCGAGGTGACAGTACCCACCTCAAATGGTGACC...AGACTGACGACAACAGTGGAGACTTGGACCCAGGAGTCTTGCTGACAGCTCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643155.1
3UTR CAA 90 bp AATTTGAGTTGTGGTGGTGCTGCTTGGGGTCTCAGATGTGATAGTTaGAGCTGTCAGCAAGACTCCTGGGTCCAAGTCTCCACTGTTGTC +
Preference number: 2 (lower is better)
Translates to: NLSCGGAAWGLRCDS*SCQQDSWVQVSTVV
Trigger: GACAACAGTGGAGACTTGGACCCAGGAGTCTTGCTGACAGCTCAAACTATCACATCTGAGACCCCAAGCAGCACCACCACAACTCAAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643155.1
3UTR-3UTR TCA 90 bp AAAAATGCACACACCCGAAATGAGTTCAAACCAGCCGAAACAAAACTCAGGCAGGCAGAGAGGCTAGGCTaGAGGGGTTACAAACCACCC +
Preference number: 2 (lower is better)
Translates to: KNAHTRNEFKPAETKLRQAERLG*RGYKPP
Trigger: GGGTGGTTTGTAACCCCTTCAGCCTAGCCTCTCTGC...CTGCCTGAGTTTTGTTTCGGCTGGTTTGAACTCATTTCGGGTGTGTGCATTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR-3UTR TCA 90 bp CTCTTTCCCTCCCTCCTGTTGTTCATGTCTCACATGGGTACCAAAAGAAAAATGGGGGGAGCACTTAGCTaGGCCACTGCTTCTGATGAG +
Preference number: 2 (lower is better)
Translates to: LFPSLLLFMSHMGTKRKMGGALS*ATASDE
Trigger: CTCATCAGAAGCAGTGGCTCAGCTAAGTGCTCCCCC...CATTTTTCTTTTGGTACCCATGTGAGACATGAACAACAGGAGGGAGGGAAAGAG
50% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR-3UTR TCA 90 bp CTCTTTCCCTCCCTCCTGTTGTTCATGTCTCACATGGGTACCAAAAGAAAAATGACAGACCTCAGCTGGTaGGTGGGAATGAGCAGGGCT +
Preference number: 2 (lower is better)
Translates to: LFPSLLLFMSHMGTKRKMTDLSW*VGMSRA
Trigger: AGCCCTGCTCATTCCCACTCACCAGCTGAGGTCTGT...CATTTTTCTTTTGGTACCCATGTGAGACATGAACAACAGGAGGGAGGGAAAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR-3UTR TCA 90 bp GGGCTCTTTCCCTCCCTCCTGTTGTTCATGTCTCACATGGGTACCAAAAGAAAACAAGCCTTCAAAACCTaGCAGACCTCAGCTGGTGAG +
Preference number: 2 (lower is better)
Translates to: GLFPSLLLFMSHMGTKRKQAFKT*QTSAGE
Trigger: CTCACCAGCTGAGGTCTGTCAGGTTTTGAAGGCTTG...TTTTCTTTTGGTACCCATGTGAGACATGAACAACAGGAGGGAGGGAAAGAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR-3UTR TCA 90 bp AAAAATGCACACACCCGAAATGAGTTCAAACCAGCCGAAACAAAACTCAGGCAGGGCAAGAGAACTGCTTaGACCCAGGAGGCGGAGGTT +
Preference number: 2 (lower is better)
Translates to: KNAHTRNEFKPAETKLRQGKRTA*TQEAEV
Trigger: AACCTCCGCCTCCTGGGTTCAAGCAGTTCTCTTGCC...CTGCCTGAGTTTTGTTTCGGCTGGTTTGAACTCATTTCGGGTGTGTGCATTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR-3UTR TCA 90 bp GTACGCTCGAAGTGTGGGGCAGGCCTGTCAATTAGAGCACTAGCTTGCCTGGTCAAACTTTCTAGTCCCTaGAGGCACAGTTTGAATACA +
Preference number: 2 (lower is better)
Translates to: VRSKCGAGLSIRALACLVKLSSP*RHSLNT
Trigger: TGTATTCAAACTGTGCCTTCAGGGACTAGAAAGTTT...GACCAGGCAAGCTAGTGCTCTAATTGACAGGCCTGCCCCACACTTCGAGCGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642643.1
ENST00000648891.1
3UTR-3UTR TCA 90 bp CCGTGGTTCTGGTACAGACTCCATGAAGTTCTTTTTCAGCTCACTGATGCTGGCTGTTTGGTCACCATTTaGGGTGGGTACTGTCACCTC +
Preference number: 2 (lower is better)
Translates to: PWFWYRLHEVLFQLTDAGCLVTI*GGYCHL
Trigger: GAGGTGACAGTACCCACCTCAAATGGTGACCAAACA...GCCAGCATCAGTGAGCTGAAAAAGAACTTCATGGAGTCTGTACCAGAACCACGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000643155.1
ENST00000648891.1
3UTR-3UTR TCA 90 bp TTAAACTTCAATGCAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTGGCCGGAGAATTGCTTaGACCCGGGAGGCAGAGGTT +
Preference number: 2 (lower is better)
Translates to: LNFNAEKLALGSPLLLLCGRRIA*TREAEV
Trigger: AACCTCTGCCTCCCGGGTTCAAGCAATTCTCCGGCC...ACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTGCATTGAAGTTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
3UTR-3UTR GCA 90 bp AAAAATGCACACACCCGAAATGAGTTCAAACCAGCCGAAACAAAACTCAGGCAGTTGAGCCCCAGTGACTaGTGCCCGATACCCACTGTC +
Preference number: 2 (lower is better)
Translates to: KNAHTRNEFKPAETKLRQLSPSD*CPIPTV
Trigger: GACAGTGGGTATCGGGCAGCAGTCACTGGGGCTCAA...CTGCCTGAGTTTTGTTTCGGCTGGTTTGAACTCATTTCGGGTGTGTGCATTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR-3UTR CCA 90 bp GAAGCTGGAACTGGGATTCTAAGGAGCCTTGAGGCCAATGTGTTTGTGGGAAGCTCCCGAAGAATTCCATaGACCCTGTCAGTGTCTGTT +
Preference number: 2 (lower is better)
Translates to: EAGTGILRSLEANVFVGSSRRIP*TLSVSV
Trigger: AACAGACACTGACAGGGTCCATGGAATTCTTCGGGA...GCTTCCCACAAACACATTGGCCTCAAGGCTCCTTAGAATCCCAGTTCCAGCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR-3UTR CCA 90 bp CCCTTGTCATGTGGTGTCTTGTGGGGAGAACGGCTCCTAAAAGTCAATTCCTTGGAAGTCCCACTAAGCTaGCTTTGGCTTCCAACACAG +
Preference number: 2 (lower is better)
Translates to: PLSCGVLWGERLLKVNSLEVPLS*LWLPTQ
Trigger: CTGTGTTGGAAGCCAAAGCCAGCTTAGTGGGACTTC...CAAGGAATTGACTTTTAGGAGCCGTTCTCCCCACAAGACACCACATGACAAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR-3UTR CCA 90 bp AAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAATACATACTAATTTCAGTCCTGGCTaGAGGCTAAGGGGCACCAGC +
Preference number: 2 (lower is better)
Translates to: KAGFGQSIATPLYPTIHTNFSPG*RLRGTS
Trigger: GCTGGTGCCCCTTAGCCTCCAGCCAGGACTGAAATT...AGTATGTATTGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
3UTR-3UTR TCA 90 bp AAAAATGCACACACCCGAAATGAGTTCAAACCAGCCGAAACAAAACTCAGGCAGCCCTCCCTGGCATTCTaGTACACTCACATCACTGGC +
Preference number: 2 (lower is better)
Translates to: KNAHTRNEFKPAETKLRQPSLAF*YTHITG
Trigger: GCCAGTGATGTGAGTGTATCAGAATGCCAGGGAGGG...CTGCCTGAGTTTTGTTTCGGCTGGTTTGAACTCATTTCGGGTGTGTGCATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR-3UTR TCA 90 bp AAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAATACATACTGCATGTGAGTTGTCCTaGAGAGAGAGAGAGTGCCCA +
Preference number: 2 (lower is better)
Translates to: KAGFGQSIATPLYPTIHTACELS*RERECP
Trigger: TGGGCACTCTCTCTCTCTTCAGGACAACTCACATGC...AGTATGTATTGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
3UTR-3UTR TCA 90 bp CAAAGTACTCACTCCTTCTCCTGTGGGGATTTGCCCATTGATGTTAAGAGTTCGTCCCCAGTCTGGTCTTaGATTCCTGAGCTTGAGCGA +
Preference number: 2 (lower is better)
Translates to: QSTHSFSCGDLPIDVKSSSPVWS*IPELER
Trigger: TCGCTCAAGCTCAGGAATTCAAGACCAGACTGGGGA...CGAACTCTTAACATCAATGGGCAAATCCCCACAGGAGAAGGAGTGAGTACTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642643.1
3UTR-3UTR GCA 90 bp AAAAATGCACACACCCGAAATGAGTTCAAACCAGCCGAAACAAAACTCAGGCAGAGCCCCAGTGACTGCTaGCCGATACCCACTGTCTAT +
Preference number: 2 (lower is better)
Translates to: KNAHTRNEFKPAETKLRQSPSDC*PIPTVY
Trigger: ATAGACAGTGGGTATCGGGCAGCAGTCACTGGGGCT...CTGCCTGAGTTTTGTTTCGGCTGGTTTGAACTCATTTCGGGTGTGTGCATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR-3UTR GCA 90 bp CAATTGGTCATGTGGACAAAGTACTCACTCCTTCTCCTGTGGGGATTTGCCCATCCAGAAGCATGTAGCTaGAGAGACAGTTCTCAGAGG +
Preference number: 2 (lower is better)
Translates to: QLVMWTKYSLLLLWGFAHPEACS*RDSSQR
Trigger: CCTCTGAGAACTGTCTCTGCAGCTACATGCTTCTGG...ATGGGCAAATCCCCACAGGAGAAGGAGTGAGTACTTTGTCCACATGACCAATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642643.1
ENST00000648891.1
3UTR-3UTR GCA 90 bp TTCCCTCCATTTTCACAATTGGTCATGTGGACAAAGTACTCACTCCTTCTCCTGGGACGCCCGTTTACTTaGTGTACGCTCGAAGTGTGG +
Preference number: 2 (lower is better)
Translates to: FPPFSQLVMWTKYSLLLLGRPFT*CTLEVW
Trigger: CCACACTTCGAGCGTACAGCAAGTAAACGGGCGTCC...CAGGAGAAGGAGTGAGTACTTTGTCCACATGACCAATTGTGAAAATGGAGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642643.1
ENST00000648891.1
3UTR-3UTR GCA 90 bp GTACGCTCGAAGTGTGGGGCAGGCCTGTCAATTAGAGCACTAGCTTGCCTGGTCTCCAAAAGATTGAGATaGTCACATACTCGTTTAAGC +
Preference number: 2 (lower is better)
Translates to: VRSKCGAGLSIRALACLVSKRLR*SHTRLS
Trigger: GCTTAAACGAGTATGTGAGCATCTCAATCTTTTGGA...GACCAGGCAAGCTAGTGCTCTAATTGACAGGCCTGCCCCACACTTCGAGCGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643155.1
3UTR-3UTR CCA 90 bp GCCACATTCCTTGTCATTTGGGATGAAAGAAAGGCCCAGGATCAGACAGAAGTACTGGTTTCTCTTGGATaGGAGAAGGGCAGAGTTGGG +
Preference number: 2 (lower is better)
Translates to: ATFLVIWDERKAQDQTEVLVSLG*EKGRVG
Trigger: CCCAACTCTGCCCTTCTCCCATCCAAGAGAAACCAG...TACTTCTGTCTGATCCTGGGCCTTTCTTTCATCCCAAATGACAAGGAATGTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR-3UTR CCA 90 bp TCCATTAGAGCTTTTGGCCCAAAGTGCCTATTTTTCTGTGAGATTTGGTCTCCTTCTTTCCGAGGTCTGTaGATCAGGGCTGGTGCCCTC +
Preference number: 2 (lower is better)
Translates to: SIRAFGPKCLFFCEIWSPSFRGL*IRAGAL
Trigger: GAGGGCACCAGCCCTGATCCACAGACCTCGGAAAGA...AGGAGACCAAATCTCACAGAAAAATAGGCACTTTGGGCCAAAAGCTCTAATGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR-3UTR CCA 90 bp GCCACATTCCTTGTCATTTGGGATGAAAGAAAGGCCCAGGATCAGACAGAAGTATTTGGTCTCCTGAGATaGGAGCTAGGGGGAGCACTT +
Preference number: 2 (lower is better)
Translates to: ATFLVIWDERKAQDQTEVFGLLR*ELGGAL
Trigger: AAGTGCTCCCCCTAGCTCCCATCTCAGGAGACCAAA...TACTTCTGTCTGATCCTGGGCCTTTCTTTCATCCCAAATGACAAGGAATGTGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR-3UTR CCA 90 bp GGCAGGAAAAAGTTGTCTGTCCCTGTACAGCTCAGAAATACTCATAAAAAGGCCAATTTCAGTCCTGGCTaGAGGCTAAGGGGCACCAGC +
Preference number: 2 (lower is better)
Translates to: GRKKLSVPVQLRNTHKKANFSPG*RLRGTS
Trigger: GCTGGTGCCCCTTAGCCTCCAGCCAGGACTGAAATT...GGCCTTTTTATGAGTATTTCTGAGCTGTACAGGGACAGACAACTTTTTCCTGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
3UTR-3UTR CCA 90 bp AGCTGCAGAGACAGTTCTCAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTCTCAGCTTGCTCAGGTaGCTCGTCTTCCTTTTTCAC +
Preference number: 2 (lower is better)
Translates to: SCRDSSQRLIIYWWLQIALSLLR*LVFLFH
Trigger: GTGAAAAAGGAAGACGAGCCACCTGAGCAAGCTGAG...AGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTGAGAACTGTCTCTGCAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642643.1
ENST00000648891.1
3UTR-3UTR TCA 90 bp GGCAGGAAAAAGTTGTCTGTCCCTGTACAGCTCAGAAATACTCATAAAAAGGCCGCATGTGAGTTGTCCTaGAGAGAGAGAGAGTGCCCA +
Preference number: 2 (lower is better)
Translates to: GRKKLSVPVQLRNTHKKAACELS*RERECP
Trigger: TGGGCACTCTCTCTCTCTTCAGGACAACTCACATGC...GGCCTTTTTATGAGTATTTCTGAGCTGTACAGGGACAGACAACTTTTTCCTGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
3UTR-3UTR TCA 90 bp CTCTGGCTCAGCTTGCTCAGGTGGCTCGTCTTCCTTTTTCACTTCAGCCTTCACTCTTTTTCAGCTCACTaGTGCTGGCATGATGTTTTT +
Preference number: 2 (lower is better)
Translates to: LWLSLLRWLVFLFHFSLHSFSAH*CWHDVF
Trigger: AAAAACATCATGCCAGCATCAGTGAGCTGAAAAAGA...GTGAAGGCTGAAGTGAAAAAGGAAGACGAGCCACCTGAGCAAGCTGAGCCAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
3UTR-3UTR TCA 90 bp CCGTGGTTCTGGTACAGACTCCATGAAGTTCTTTTTCAGCTCACTGATGCTGGCAGCAGACACCTAGGATaGTATCTACTCCTTCCAAGT +
Preference number: 2 (lower is better)
Translates to: PWFWYRLHEVLFQLTDAGSRHLG*YLLLPS
Trigger: ACTTGGAAGGAGTAGATATCATCCTAGGTGTCTGCT...GCCAGCATCAGTGAGCTGAAAAAGAACTTCATGGAGTCTGTACCAGAACCACGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642643.1
ENST00000643155.1
3UTR-3UTR GCA 90 bp GTTGGGAGAAGCAGCTTTAGACATTTCTCTTGCTCACTGCCCTTGAGCCCCAGTTTCCCCTGTGTGAAGTaGACACTCTCAAAACTAGAA +
Preference number: 2 (lower is better)
Translates to: VGRSSFRHFSCSLPLSPSFPCVK*TLSKLE
Trigger: TTCTAGTTTTGAGAGTGTGCACTTCACACAGGGGAA...ACTGGGGCTCAAGGGCAGTGAGCAAGAGAAATGTCTAAAGCTGCTTCTCCCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR-3UTR GCA 90 bp AAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAATACATACTCTTTGGGCAGTCCATTaGTACTCCTTTGTACCCCAC +
Preference number: 2 (lower is better)
Translates to: KAGFGQSIATPLYPTIHTLWAVH*YSFVPH
Trigger: GTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAG...AGTATGTATTGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
3UTR-3UTR GCA 90 bp TCTTGGATGGGAGAAGGGCAGAGTTGGGGTAGGTTAGTTCCTGAGCTCACTCATCCAACAAAGAAACCTTaGAGTGCATGTTCCTGTGTT +
Preference number: 2 (lower is better)
Translates to: SWMGEGQSWGRLVPELTHPTKKP*SACSCV
Trigger: AACACAGGAACATGCACTGCAAGGTTTCTTTGTTGG...ATGAGTGAGCTCAGGAACTAACCTACCCCAACTCTGCCCTTCTCCCATCCAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643155.1
3UTR-3UTR GCA 90 bp CTTCATCCAATACAAGGGCTTGGCCATTCTCCTCTTAATCATTCTTACCCTATTCTGAGGCCGGAGAATTaGTTGAACCCGGGAGGCAGA +
Preference number: 2 (lower is better)
Translates to: LHPIQGLGHSPLNHSYPILRPEN*LNPGGR
Trigger: TCTGCCTCCCGGGTTCAAGCAATTCTCCGGCCTCAG...AATAGGGTAAGAATGATTAAGAGGAGAATGGCCAAGCCCTTGTATTGGATGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644342.1
ENST00000646800.1
3UTR-3UTR CCA 90 bp CTCTTTCCCTCCCTCCTGTTGTTCATGTCTCACATGGGTACCAAAAGAAAAATGTTTGGTCTCCTGAGATaGGAGCTAGGGGGAGCACTT +
Preference number: 2 (lower is better)
Translates to: LFPSLLLFMSHMGTKRKMFGLLR*ELGGAL
Trigger: AAGTGCTCCCCCTAGCTCCCATCTCAGGAGACCAAA...CATTTTTCTTTTGGTACCCATGTGAGACATGAACAACAGGAGGGAGGGAAAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR-3UTR CCA 90 bp GGGCTCTTTCCCTCCCTCCTGTTGTTCATGTCTCACATGGGTACCAAAAGAAAATCATGTGGTGTCTTGTaGGGAGAACGGCTCCTAAAA +
Preference number: 2 (lower is better)
Translates to: GLFPSLLLFMSHMGTKRKSCGVL*GERLLK
Trigger: TTTTAGGAGCCGTTCTCCCCACAAGACACCACATGA...TTTTCTTTTGGTACCCATGTGAGACATGAACAACAGGAGGGAGGGAAAGAGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR-3UTR CCA 90 bp AAAAATGCACACACCCGAAATGAGTTCAAACCAGCCGAAACAAAACTCAGGCAGAAAATTTGCTGGGCGTaGTGGTGTGCGCCTGTCATC +
Preference number: 2 (lower is better)
Translates to: KNAHTRNEFKPAETKLRQKICWA*WCAPVI
Trigger: GATGACAGGCGCACACCACCACGCCCAGCAAATTTT...CTGCCTGAGTTTTGTTTCGGCTGGTTTGAACTCATTTCGGGTGTGTGCATTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR-3UTR CCA 90 bp AAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAATACATACTCAGAAAAGCTGGCTTTaGGCAGTCCATTGCTACTCC +
Preference number: 2 (lower is better)
Translates to: KAGFGQSIATPLYPTIHTQKSWL*AVHCYS
Trigger: GGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTG...AGTATGTATTGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
3UTR-3UTR CCA 90 bp AGAAGTCAACATGCAAACAGAGGACACATACTTGTCACAAGTGAACTTGAGGTCAATTTCAGTCCTGGCTaGAGGCTAAGGGGCACCAGC +
Preference number: 2 (lower is better)
Translates to: RSQHANRGHILVTSELEVNFSPG*RLRGTS
Trigger: GCTGGTGCCCCTTAGCCTCCAGCCAGGACTGAAATT...GACCTCAAGTTCACTTGTGACAAGTATGTGTCCTCTGTTTGCATGTTGACTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
3UTR-3UTR CCA 90 bp CAGAGACAGTTCTCAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTCCTATCCATTCACTAGGCCGTaGTTCTGGTACAGACTCCAT +
Preference number: 2 (lower is better)
Translates to: QRQFSEANHLLVAPNSSYPFTRP*FWYRLH
Trigger: ATGGAGTCTGTACCAGAACCACGGCCTAGTGAATGG...ATAGGAGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTGAGAACTGTCTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642643.1
ENST00000648891.1
3UTR-3UTR TCA 90 bp GAAGCTGGAACTGGGATTCTAAGGAGCCTTGAGGCCAATGTGTTTGTGGGAAGCATAATCTTGAAAGTCTaGAGTCTGACTATGGCAGGT +
Preference number: 2 (lower is better)
Translates to: EAGTGILRSLEANVFVGSIILKV*SLTMAG
Trigger: ACCTGCCATAGTCAGACTTCAGACTTTCAAGATTAT...GCTTCCCACAAACACATTGGCCTCAAGGCTCCTTAGAATCCCAGTTCCAGCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR-3UTR TCA 90 bp TCCATTAGAGCTTTTGGCCCAAAGTGCCTATTTTTCTGTGAGATTTGGTCTCCTGGCTTCCAACACAGCTaGCAAGAGTCCTTGGAGGAT +
Preference number: 2 (lower is better)
Translates to: SIRAFGPKCLFFCEIWSPGFQHS*QESLED
Trigger: ATCCTCCAAGGACTCTTGTCAGCTGTGTTGGAAGCC...AGGAGACCAAATCTCACAGAAAAATAGGCACTTTGGGCCAAAAGCTCTAATGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR-3UTR TCA 90 bp CCCTTGTCATGTGGTGTCTTGTGGGGAGAACGGCTCCTAAAAGTCAATTCCTTGCAACTTCCATGTCTTTaGCCCAAAGAAGCTCCAAAA +
Preference number: 2 (lower is better)
Translates to: PLSCGVLWGERLLKVNSLQLPCL*PKEAPK
Trigger: TTTTGGAGCTTCTTTGGGTCAAAGACATGGAAGTTG...CAAGGAATTGACTTTTAGGAGCCGTTCTCCCCACAAGACACCACATGACAAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR-3UTR TCA 90 bp GGGCTCTTTCCCTCCCTCCTGTTGTTCATGTCTCACATGGGTACCAAAAGAAAACAGGCAGGTTCCTGTTaGGAGAAGAAAGGTCAAAAA +
Preference number: 2 (lower is better)
Translates to: GLFPSLLLFMSHMGTKRKQAGSC*EKKGQK
Trigger: TTTTTGACCTTTCTTCTCTCAACAGGAACCTGCCTG...TTTTCTTTTGGTACCCATGTGAGACATGAACAACAGGAGGGAGGGAAAGAGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR-3UTR TCA 90 bp AGAAGTCAACATGCAAACAGAGGACACATACTTGTCACAAGTGAACTTGAGGTCGCATGTGAGTTGTCCTaGAGAGAGAGAGAGTGCCCA +
Preference number: 2 (lower is better)
Translates to: RSQHANRGHILVTSELEVACELS*RERECP
Trigger: TGGGCACTCTCTCTCTCTTCAGGACAACTCACATGC...GACCTCAAGTTCACTTGTGACAAGTATGTGTCCTCTGTTTGCATGTTGACTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
3UTR-3UTR TCA 90 bp CTCCTTTGCCTCCTTGATGGCTTGTACAAGGACCTGATCATGGTCAATATCAGCTCAAGTTCCTTGGTCTaGTTCGGGGCCAGTTTAAAA +
Preference number: 2 (lower is better)
Translates to: LLCLLDGLYKDLIMVNISSSSLV*FGASLK
Trigger: TTTTAAACTGGCCCCGAATCAGACCAAGGAACTTGA...GCTGATATTGACCATGATCAGGTCCTTGTACAAGCCATCAAGGAGGCAAAGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643155.1
3UTR-3UTR TCA 90 bp AAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAATACATACTAGAGGTGGCACTTTTTaGGAGACTTGTGATCCTCAG +
Preference number: 2 (lower is better)
Translates to: KAGFGQSIATPLYPTIHTRGGTF*ETCDPQ
Trigger: CTGAGGATCACAAGTCTCTCAAAAAGTGCCACCTCT...AGTATGTATTGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
3UTR-3UTR GCA 90 bp CAGATATCTGAAGCAACTTCCATGTCTTTGACCCAAAGAAGCTCCAAAAAGAAACTCAGCAGAGGGCTCTaGCTTACCAAAACCACCCGC +
Preference number: 2 (lower is better)
Translates to: QISEATSMSLTQRSSKKKLSRGL*LTKTTR
Trigger: GCGGGTGGTTTTGGTAAGGCAGAGCCCTCTGCTGAG...TTTCTTTTTGGAGCTTCTTTGGGTCAAAGACATGGAAGTTGCTTCAGATATCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR-3UTR GCA 90 bp TCTATACACCAGGCAGGAAAAAGTTGTCTGTCCCTGTACAGCTCAGAAATACTCCTTTGGGCAGTCCATTaGTACTCCTTTGTACCCCAC +
Preference number: 2 (lower is better)
Translates to: SIHQAGKSCLSLYSSEILLWAVH*YSFVPH
Trigger: GTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAG...GAGTATTTCTGAGCTGTACAGGGACAGACAACTTTTTCCTGCCTGGTGTATAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
3UTR-3UTR GCA 90 bp TTGGATCCTAGCGCAAGAAATTTGCTTTTGGGAATGGTGTCTGTAGATGTCAATTCATACTGCTCTTGCTaGCAGGCACGGTGGCTTACG +
Preference number: 2 (lower is better)
Translates to: LDPSARNLLLGMVSVDVNSYCSC*QARWLT
Trigger: CGTAAGCCACCGTGCCTGGCAGCAAGAGCAGTATGA...ATTGACATCTACAGACACCATTCCCAAAAGCAAATTTCTTGCGCTAGGATCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648891.1
3UTR-3UTR GCA 90 bp GAGACATTAACCAAATCATCCATATTGGTACATTCAAGTGCCATAAAAAGCAAGCTGAGATCGCGCCACTaGACTCCAGCCTGGGGGACA +
Preference number: 2 (lower is better)
Translates to: ETLTKSSILVHSSAIKSKLRSRH*TPAWGT
Trigger: TGTCCCCCAGGCTGGAGTGCAGTGGCGCGATCTCAG...CTTGCTTTTTATGGCACTTGAATGTACCAATATGGATGATTTGGTTAATGTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
3UTR-3UTR CCA 90 bp AAAAATGCACACACCCGAAATGAGTTCAAACCAGCCGAAACAAAACTCAGGCAGCCACTAAGCTGGCTTTaGCTTCCAACACAGCTGACA +
Preference number: 2 (lower is better)
Translates to: KNAHTRNEFKPAETKLRQPLSWL*LPTQLT
Trigger: TGTCAGCTGTGTTGGAAGCCAAAGCCAGCTTAGTGG...CTGCCTGAGTTTTGTTTCGGCTGGTTTGAACTCATTTCGGGTGTGTGCATTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR-3UTR CCA 90 bp CCCTTGTCATGTGGTGTCTTGTGGGGAGAACGGCTCCTAAAAGTCAATTCCTTGTTTTTCTGTGAGATTTaGTCTCCTGAGATGGGAGCT +
Preference number: 2 (lower is better)
Translates to: PLSCGVLWGERLLKVNSLFFCEI*SPEMGA
Trigger: AGCTCCCATCTCAGGAGACCAAATCTCACAGAAAAA...CAAGGAATTGACTTTTAGGAGCCGTTCTCCCCACAAGACACCACATGACAAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR-3UTR CCA 90 bp TCTATACACCAGGCAGGAAAAAGTTGTCTGTCCCTGTACAGCTCAGAAATACTCCAGAAAAGCTGGCTTTaGGCAGTCCATTGCTACTCC +
Preference number: 2 (lower is better)
Translates to: SIHQAGKSCLSLYSSEILQKSWL*AVHCYS
Trigger: GGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTG...GAGTATTTCTGAGCTGTACAGGGACAGACAACTTTTTCCTGCCTGGTGTATAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
3UTR-3UTR CCA 90 bp GGCAGGAAAAAGTTGTCTGTCCCTGTACAGCTCAGAAATACTCATAAAAAGGCCCAGAAAAGCTGGCTTTaGGCAGTCCATTGCTACTCC +
Preference number: 2 (lower is better)
Translates to: GRKKLSVPVQLRNTHKKAQKSWL*AVHCYS
Trigger: GGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTG...GGCCTTTTTATGAGTATTTCTGAGCTGTACAGGGACAGACAACTTTTTCCTGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
3UTR-3UTR CCA 90 bp AGGCCGTGGTTCTGGTACAGACTCCATGAAGTTCTTTTTCAGCTCACTGATGCTAGGCTAATCATCTACTaGTGGCTCCAAATAGCTCCT +
Preference number: 2 (lower is better)
Translates to: RPWFWYRLHEVLFQLTDARLIIY*WLQIAP
Trigger: AGGAGCTATTTGGAGCCACCAGTAGATGATTAGCCT...AGCATCAGTGAGCTGAAAAAGAACTTCATGGAGTCTGTACCAGAACCACGGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642643.1
ENST00000648891.1
3UTR-3UTR CCA 90 bp CAAAGTACTCACTCCTTCTCCTGTGGGGATTTGCCCATTGATGTTAAGAGTTCGGCAAGCTTCTGTGTTTaGTCACCATTTGAGGTGGGT +
Preference number: 2 (lower is better)
Translates to: QSTHSFSCGDLPIDVKSSASFCV*SPFEVG
Trigger: ACCCACCTCAAATGGTGACCAAACACAGAAGCTTGC...CGAACTCTTAACATCAATGGGCAAATCCCCACAGGAGAAGGAGTGAGTACTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648891.1
3UTR CAA 90 bp TGGACAATAGGGACGTCTTTGGTTGGGATTTCACTTTTCACAGCATaGGCATTATCTGAGATGGTGACAGTTTGTGTCTTCACCAGGGGA +
Preference number: 2 (lower is better)
Translates to: WTIGTSLVGISLFTA*ALSEMVTVCVFTRG
Trigger: TCCCCTGGTGAAGACACAAACTGTCACCATCTCAGATAATGCCAATGCTGTGAAAAGTGAAATCCCAACCAAAGACGTCCCTATTGTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643155.1
3UTR-3UTR TCA 90 bp CAGATATCTGAAGCAACTTCCATGTCTTTGACCCAAAGAAGCTCCAAAAAGAAACCCTCCCTGGCATTCTaGTACACTCACATCACTGGC +
Preference number: 2 (lower is better)
Translates to: QISEATSMSLTQRSSKKKPSLAF*YTHITG
Trigger: GCCAGTGATGTGAGTGTATCAGAATGCCAGGGAGGG...TTTCTTTTTGGAGCTTCTTTGGGTCAAAGACATGGAAGTTGCTTCAGATATCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR-3UTR TCA 90 bp AAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAATACATACTATAGGTAGAGTAGTCTaGGAATTTCAGTCCTGGCTG +
Preference number: 2 (lower is better)
Translates to: KAGFGQSIATPLYPTIHTIGRVV*EFQSWL
Trigger: CAGCCAGGACTGAAATTCTCAGACTACTCTACCTAT...AGTATGTATTGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
3UTR-3UTR TCA 90 bp CTTCATCCAATACAAGGGCTTGGCCATTCTCCTCTTAATCATTCTTACCCTATTGCATGTGAGTTGTCCTaGAGAGAGAGAGAGTGCCCA +
Preference number: 2 (lower is better)
Translates to: LHPIQGLGHSPLNHSYPIACELS*RERECP
Trigger: TGGGCACTCTCTCTCTCTTCAGGACAACTCACATGC...AATAGGGTAAGAATGATTAAGAGGAGAATGGCCAAGCCCTTGTATTGGATGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636666.1
ENST00000644342.1
ENST00000646800.1
3UTR-3UTR TCA 90 bp TCTATACACCAGGCAGGAAAAAGTTGTCTGTCCCTGTACAGCTCAGAAATACTCAACAGGTTAGGCATGTaGGTTGTCCTGAAGAGAGAG +
Preference number: 2 (lower is better)
Translates to: SIHQAGKSCLSLYSSEILNRLGM*VVLKRE
Trigger: CTCTCTCTTCAGGACAACTCACATGCCTAACCTGTT...GAGTATTTCTGAGCTGTACAGGGACAGACAACTTTTTCCTGCCTGGTGTATAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
3UTR-3UTR TCA 90 bp ATGTTGCCCAGGCTGGTCTTAAACTACTGGACTCAAGTGATCTGCCTGTCTTGGCCTGAAGGCACAGTTTaGATACAAATAAACCTCTAC +
Preference number: 2 (lower is better)
Translates to: MLPRLVLNYWTQVICLSWPEGTV*IQINLY
Trigger: GTAGAGGTTTATTTGTATTCAAACTGTGCCTTCAGG...CCAAGACAGGCAGATCACTTGAGTCCAGTAGTTTAAGACCAGCCTGGGCAACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000645184.1
ENST00000648181.1
3UTR-3UTR TCA 90 bp AGGCCGTGGTTCTGGTACAGACTCCATGAAGTTCTTTTTCAGCTCACTGATGCTACTTATGCAGTTCCATaGCCTTCTCTTCAAGTTCCT +
Preference number: 2 (lower is better)
Translates to: RPWFWYRLHEVLFQLTDATYAVP*PSLQVP
Trigger: AGGAACTTGAAGAGAAGGTCATGGAACTGCATAAGT...AGCATCAGTGAGCTGAAAAAGAACTTCATGGAGTCTGTACCAGAACCACGGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643155.1
3UTR-3UTR TCA 90 bp ATCTTAATTCAGAGAAGGGTTTATGTACAGATCTTGAGTAAATCTGTGTTCCAGGGCCGGAGAATTGCTTaGACCCGGGAGGCAGAGGTT +
Preference number: 2 (lower is better)
Translates to: ILIQRRVYVQILSKSVFQGRRIA*TREAEV
Trigger: AACCTCTGCCTCCCGGGTTCAAGCAATTCTCCGGCC...CTGGAACACAGATTTACTCAAGATCTGTACATAAACCCTTCTCTGAATTAAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
3UTR-3UTR TCA 90 bp ATATTGGCAGTGTTACCTTTAGGTAATACAAAGCTGGAATGCCCAATATTTTTCGGCCGGAGAATTGCTTaGACCCGGGAGGCAGAGGTT +
Preference number: 2 (lower is better)
Translates to: ILAVLPLGNTKLECPIFFGRRIA*TREAEV
Trigger: AACCTCTGCCTCCCGGGTTCAAGCAATTCTCCGGCC...GAAAAATATTGGGCATTCCAGCTTTGTATTACCTAAAGGTAACACTGCCAATAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644342.1
ENST00000646800.1
3UTR-3UTR TCA 90 bp TCTATACACCAGGCAGGAAAAAGTTGTCTGTCCCTGTACAGCTCAGAAATACTCGAGCACCCTGTTTTCTaGTCACAGAAAGACCAACCA +
Preference number: 2 (lower is better)
Translates to: SIHQAGKSCLSLYSSEILEHPVF*SQKDQP
Trigger: TGGTTGGTCTTTCTGTGATCAGAAAACAGGGTGCTC...GAGTATTTCTGAGCTGTACAGGGACAGACAACTTTTTCCTGCCTGGTGTATAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
3UTR-3UTR TCA 90 bp GGCAGGAAAAAGTTGTCTGTCCCTGTACAGCTCAGAAATACTCATAAAAAGGCCGAGCACCCTGTTTTCTaGTCACAGAAAGACCAACCA +
Preference number: 2 (lower is better)
Translates to: GRKKLSVPVQLRNTHKKAEHPVF*SQKDQP
Trigger: TGGTTGGTCTTTCTGTGATCAGAAAACAGGGTGCTC...GGCCTTTTTATGAGTATTTCTGAGCTGTACAGGGACAGACAACTTTTTCCTGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
3UTR-3UTR TCA 90 bp CAGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAGAAGTTCAATGGAGCACCCTGTTTTCTaGTCACAGAAAGACCAACCA +
Preference number: 2 (lower is better)
Translates to: QRASYSNNTVEAKDRSSMEHPVF*SQKDQP
Trigger: TGGTTGGTCTTTCTGTGATCAGAAAACAGGGTGCTC...CATTGAACTTCTGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
3UTR-3UTR TCA 90 bp GGCTCAGCTTGCTCAGGTGGCTCGTCTTCCTTTTTCACTTCAGCCTTCACTGTTTTTTTGATCTCCTCTTaGCTCTTGTCTAAATCCTTC +
Preference number: 2 (lower is better)
Translates to: GSACSGGSSSFFTSAFTVFLISS*LLSKSF
Trigger: GAAGGATTTAGACAAGAGTCAAGAGGAGATCAAAAA...AACAGTGAAGGCTGAAGTGAAAAAGGAAGACGAGCCACCTGAGCAAGCTGAGCC
46% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000642643.1
3UTR-3UTR GCA 90 bp AAAAATGCACACACCCGAAATGAGTTCAAACCAGCCGAAACAAAACTCAGGCAGTTTAGACATTTCTCTTaGTCACTGCCCTTGAGCCCC +
Preference number: 2 (lower is better)
Translates to: KNAHTRNEFKPAETKLRQFRHFS*SLPLSP
Trigger: GGGGCTCAAGGGCAGTGAGCAAGAGAAATGTCTAAA...CTGCCTGAGTTTTGTTTCGGCTGGTTTGAACTCATTTCGGGTGTGTGCATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR-3UTR GCA 90 bp ACTATCAAGATCAGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACACTTTGGGCAGTCCATTaGTACTCCTTTGTACCCCAC +
Preference number: 2 (lower is better)
Translates to: TIKIRGHHTAITQLKPRTLWAVH*YSFVPH
Trigger: GTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAG...TGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCTGATCTTGATAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
3UTR-3UTR GCA 90 bp TTAAACTTCAATGCAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTCTTTGGGCAGTCCATTaGTACTCCTTTGTACCCCAC +
Preference number: 2 (lower is better)
Translates to: LNFNAEKLALGSPLLLLCLWAVH*YSFVPH
Trigger: GTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAG...ACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTGCATTGAAGTTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
3UTR-3UTR GCA 90 bp AGCTGCAGAGACAGTTCTCAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTTCTCCTGTGGGGATTTaGCCATTGATGTTAAGAGTT +
Preference number: 2 (lower is better)
Translates to: SCRDSSQRLIIYWWLQIASPVGI*PLMLRV
Trigger: AACTCTTAACATCAATGGGCAAATCCCCACAGGAGA...AGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTGAGAACTGTCTCTGCAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642643.1
ENST00000648891.1
3UTR-3UTR GCA 90 bp CCGTGGTTCTGGTACAGACTCCATGAAGTTCTTTTTCAGCTCACTGATGCTGGCTCCTTCCAAGTCCTTTaGTTTATGAAGATCAACTCC +
Preference number: 2 (lower is better)
Translates to: PWFWYRLHEVLFQLTDAGSFQVL*FMKINS
Trigger: GGAGTTGATCTTCATAAAGCAAAGGACTTGGAAGGA...GCCAGCATCAGTGAGCTGAAAAAGAACTTCATGGAGTCTGTACCAGAACCACGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643155.1
3UTR-3UTR CCA 90 bp CTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGGGAGAAGGGCAGAGTTaGGGTAGGTTAGTTCCTGAG +
Preference number: 2 (lower is better)
Translates to: LESLKSDYGRLASLSFCWGEGQS*GRLVPE
Trigger: CTCAGGAACTAACCTACCCCAACTCTGCCCTTCTCC...CCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
3UTR-3UTR CCA 90 bp TCCATTAGAGCTTTTGGCCCAAAGTGCCTATTTTTCTGTGAGATTTGGTCTCCTCCACTAAGCTGGCTTTaGCTTCCAACACAGCTGACA +
Preference number: 2 (lower is better)
Translates to: SIRAFGPKCLFFCEIWSPPLSWL*LPTQLT
Trigger: TGTCAGCTGTGTTGGAAGCCAAAGCCAGCTTAGTGG...AGGAGACCAAATCTCACAGAAAAATAGGCACTTTGGGCCAAAAGCTCTAATGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR-3UTR CCA 90 bp TCCATTAGAGCTTTTGGCCCAAAGTGCCTATTTTTCTGTGAGATTTGGTCTCCTGAAGTCCCACTAAGCTaGCTTTGGCTTCCAACACAG +
Preference number: 2 (lower is better)
Translates to: SIRAFGPKCLFFCEIWSPEVPLS*LWLPTQ
Trigger: CTGTGTTGGAAGCCAAAGCCAGCTTAGTGGGACTTC...AGGAGACCAAATCTCACAGAAAAATAGGCACTTTGGGCCAAAAGCTCTAATGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR-3UTR CCA 90 bp AAAAATGCACACACCCGAAATGAGTTCAAACCAGCCGAAACAAAACTCAGGCAGTCATGTGGTGTCTTGTaGGGAGAACGGCTCCTAAAA +
Preference number: 2 (lower is better)
Translates to: KNAHTRNEFKPAETKLRQSCGVL*GERLLK
Trigger: TTTTAGGAGCCGTTCTCCCCACAAGACACCACATGA...CTGCCTGAGTTTTGTTTCGGCTGGTTTGAACTCATTTCGGGTGTGTGCATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR-3UTR CCA 90 bp CTCTTTCCCTCCCTCCTGTTGTTCATGTCTCACATGGGTACCAAAAGAAAAATGACAAAACTCAGGCAGTaGAGACTTTGGACGGTGTTG +
Preference number: 2 (lower is better)
Translates to: LFPSLLLFMSHMGTKRKMTKLRQ*RLWTVL
Trigger: CAACACCGTCCAAAGTCTCCACTGCCTGAGTTTTGT...CATTTTTCTTTTGGTACCCATGTGAGACATGAACAACAGGAGGGAGGGAAAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR-3UTR CCA 90 bp TTAAACTTCAATGCAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTCAGAAAAGCTGGCTTTaGGCAGTCCATTGCTACTCC +
Preference number: 2 (lower is better)
Translates to: LNFNAEKLALGSPLLLLCQKSWL*AVHCYS
Trigger: GGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTG...ACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTGCATTGAAGTTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
3UTR-3UTR CCA 90 bp AGAAGTCAACATGCAAACAGAGGACACATACTTGTCACAAGTGAACTTGAGGTCCAGAAAAGCTGGCTTTaGGCAGTCCATTGCTACTCC +
Preference number: 2 (lower is better)
Translates to: RSQHANRGHILVTSELEVQKSWL*AVHCYS
Trigger: GGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTG...GACCTCAAGTTCACTTGTGACAAGTATGTGTCCTCTGTTTGCATGTTGACTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
3UTR-3UTR CCA 90 bp CAGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAGAAGTTCAATGTCAATGCAGAAAAGCTaGCTTTGGGCAGTCCATTGC +
Preference number: 2 (lower is better)
Translates to: QRASYSNNTVEAKDRSSMSMQKS*LWAVHC
Trigger: GCAATGGACTGCCCAAAGCCAGCTTTTCTGCATTGA...CATTGAACTTCTGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
3UTR-3UTR CCA 90 bp GGACACATACTTGTCACAAGTGAACTTGAGGTCACAAAGCCATTGATTAAAAACAATTTCAGTCCTGGCTaGAGGCTAAGGGGCACCAGC +
Preference number: 2 (lower is better)
Translates to: GHILVTSELEVTKPLIKNNFSPG*RLRGTS
Trigger: GCTGGTGCCCCTTAGCCTCCAGCCAGGACTGAAATT...GTTTTTAATCAATGGCTTTGTGACCTCAAGTTCACTTGTGACAAGTATGTGTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
3UTR-3UTR CCA 90 bp CTCTGGCTCAGCTTGCTCAGGTGGCTCGTCTTCCTTTTTCACTTCAGCCTTCACACCTCTACTGGCTTATaGTCAGTTTATAAACATACA +
Preference number: 2 (lower is better)
Translates to: LWLSLLRWLVFLFHFSLHTSTGL*SVYKHT
Trigger: TGTATGTTTATAAACTGACCATAAGCCAGTAGAGGT...GTGAAGGCTGAAGTGAAAAAGGAAGACGAGCCACCTGAGCAAGCTGAGCCAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642643.1
ENST00000648891.1
3UTR-3UTR CCA 90 bp CTCCTTTGCCTCCTTGATGGCTTGTACAAGGACCTGATCATGGTCAATATCAGCCTCTTTTTCTGTGTTTaGTCACCATTTGAGGTGGGT +
Preference number: 2 (lower is better)
Translates to: LLCLLDGLYKDLIMVNISLFFCV*SPFEVG
Trigger: ACCCACCTCAAATGGTGACCAAACACAGAAAAAGAG...GCTGATATTGACCATGATCAGGTCCTTGTACAAGCCATCAAGGAGGCAAAGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643155.1
3UTR-3UTR TCA 90 bp GGGCTCTTTCCCTCCCTCCTGTTGTTCATGTCTCACATGGGTACCAAAAGAAAAATAATCTTGAAAGTCTaGAGTCTGACTATGGCAGGT +
Preference number: 2 (lower is better)
Translates to: GLFPSLLLFMSHMGTKRKIILKV*SLTMAG
Trigger: ACCTGCCATAGTCAGACTTCAGACTTTCAAGATTAT...TTTTCTTTTGGTACCCATGTGAGACATGAACAACAGGAGGGAGGGAAAGAGCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR-3UTR TCA 90 bp CTCTTTCCCTCCCTCCTGTTGTTCATGTCTCACATGGGTACCAAAAGAAAAATGCAGGCAGGTTCCTGTTaGGAGAAGAAAGGTCAAAAA +
Preference number: 2 (lower is better)
Translates to: LFPSLLLFMSHMGTKRKMQAGSC*EKKGQK
Trigger: TTTTTGACCTTTCTTCTCTCAACAGGAACCTGCCTG...CATTTTTCTTTTGGTACCCATGTGAGACATGAACAACAGGAGGGAGGGAAAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR-3UTR TCA 90 bp CAGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAGAAGTTCAATGATAGGTAGAGTAGTCTaGGAATTTCAGTCCTGGCTG +
Preference number: 2 (lower is better)
Translates to: QRASYSNNTVEAKDRSSMIGRVV*EFQSWL
Trigger: CAGCCAGGACTGAAATTCTCAGACTACTCTACCTAT...CATTGAACTTCTGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
3UTR-3UTR TCA 90 bp AAAGTAGAGGTGGCACTTTTTGAGAGACTTGTGATCCTCAGGGATTGGAATAGAAACAGGTTAGGCATGTaGGTTGTCCTGAAGAGAGAG +
Preference number: 2 (lower is better)
Translates to: KVEVALFERLVILRDWNRNRLGM*VVLKRE
Trigger: CTCTCTCTTCAGGACAACTCACATGCCTAACCTGTT...TCTATTCCAATCCCTGAGGATCACAAGTCTCTCAAAAAGTGCCACCTCTACTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
3UTR-3UTR TCA 90 bp AGAAGTCAACATGCAAACAGAGGACACATACTTGTCACAAGTGAACTTGAGGTCAGAGGTGGCACTTTTTaGGAGACTTGTGATCCTCAG +
Preference number: 2 (lower is better)
Translates to: RSQHANRGHILVTSELEVRGGTF*ETCDPQ
Trigger: CTGAGGATCACAAGTCTCTCAAAAAGTGCCACCTCT...GACCTCAAGTTCACTTGTGACAAGTATGTGTCCTCTGTTTGCATGTTGACTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
3UTR-3UTR GCA 90 bp GGGCTCTTTCCCTCCCTCCTGTTGTTCATGTCTCACATGGGTACCAAAAGAAAAGCTTTTGGCCCAAAGTaGCTATTTTTCTGTGAGATT +
Preference number: 2 (lower is better)
Translates to: GLFPSLLLFMSHMGTKRKAFGPK*LFFCEI
Trigger: AATCTCACAGAAAAATAGGCACTTTGGGCCAAAAGC...TTTTCTTTTGGTACCCATGTGAGACATGAACAACAGGAGGGAGGGAAAGAGCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR-3UTR GCA 90 bp CAAAGTACTCACTCCTTCTCCTGTGGGGATTTGCCCATTGATGTTAAGAGTTCGCTAGCGCAAGAAATTTaGTTTTGGGAATGGTGTCTG +
Preference number: 2 (lower is better)
Translates to: QSTHSFSCGDLPIDVKSSLAQEI*FWEWCL
Trigger: CAGACACCATTCCCAAAAGCAAATTTCTTGCGCTAG...CGAACTCTTAACATCAATGGGCAAATCCCCACAGGAGAAGGAGTGAGTACTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642643.1
ENST00000648891.1
3UTR-3UTR GCA 90 bp TTCAACACAAGTACACGAACAAACAGGTCTGAAGTATATCAGGAAAACAAAGTACTGAGGCCGGAGAATTaGTTGAACCCGGGAGGCAGA +
Preference number: 2 (lower is better)
Translates to: FNTSTRTNRSEVYQENKVLRPEN*LNPGGR
Trigger: TCTGCCTCCCGGGTTCAAGCAATTCTCCGGCCTCAG...TACTTTGTTTTCCTGATATACTTCAGACCTGTTTGTTCGTGTACTTGTGTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
3UTR-3UTR GCA 90 bp ATCTTAATTCAGAGAAGGGTTTATGTACAGATCTTGAGTAAATCTGTGTTCCAGCTGAGGCCGGAGAATTaGTTGAACCCGGGAGGCAGA +
Preference number: 2 (lower is better)
Translates to: ILIQRRVYVQILSKSVFQLRPEN*LNPGGR
Trigger: TCTGCCTCCCGGGTTCAAGCAATTCTCCGGCCTCAG...CTGGAACACAGATTTACTCAAGATCTGTACATAAACCCTTCTCTGAATTAAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
3UTR-3UTR GCA 90 bp CAGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAGAAGTTCAATGGCACGTTCCTGTGTCTaGTTTCACAGTAGAAGATCA +
Preference number: 2 (lower is better)
Translates to: QRASYSNNTVEAKDRSSMARSCV*FHSRRS
Trigger: TGATCTTCTACTGTGAAAGCAGACACAGGAACGTGC...CATTGAACTTCTGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
3UTR-3UTR CCA 90 bp GAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGTTTGGAGAAGGGCAGAGTTaGGGTAGGTTAGTTCCTGAG +
Preference number: 2 (lower is better)
Translates to: ESLKSDYGRLASLSFCWFGEGQS*GRLVPE
Trigger: CTCAGGAACTAACCTACCCCAACTCTGCCCTTCTCC...AAACCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
3UTR-3UTR CCA 90 bp AAAAATGCACACACCCGAAATGAGTTCAAACCAGCCGAAACAAAACTCAGGCAGAGGCCAATGTGTTTGTaGGAAGCAGTTGGAAGGTTA +
Preference number: 2 (lower is better)
Translates to: KNAHTRNEFKPAETKLRQRPMCL*EAVGRL
Trigger: TAACCTTCCAACTGCTTCCCACAAACACATTGGCCT...CTGCCTGAGTTTTGTTTCGGCTGGTTTGAACTCATTTCGGGTGTGTGCATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR-3UTR CCA 90 bp AAAGTAGAGGTGGCACTTTTTGAGAGACTTGTGATCCTCAGGGATTGGAATAGATCAATGCAGAAAAGCTaGCTTTGGGCAGTCCATTGC +
Preference number: 2 (lower is better)
Translates to: KVEVALFERLVILRDWNRSMQKS*LWAVHC
Trigger: GCAATGGACTGCCCAAAGCCAGCTTTTCTGCATTGA...TCTATTCCAATCCCTGAGGATCACAAGTCTCTCAAAAAGTGCCACCTCTACTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
3UTR-3UTR CCA 90 bp GAAGTCAACATGCAAACAGAGGACACATACTTGTCACAAGTGAACTTGAGGTCATCAATGCAGAAAAGCTaGCTTTGGGCAGTCCATTGC +
Preference number: 2 (lower is better)
Translates to: EVNMQTEDTYLSQVNLRSSMQKS*LWAVHC
Trigger: GCAATGGACTGCCCAAAGCCAGCTTTTCTGCATTGA...TGACCTCAAGTTCACTTGTGACAAGTATGTGTCCTCTGTTTGCATGTTGACTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
3UTR-3UTR CCA 90 bp AGCTGCAGAGACAGTTCTCAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTCTAATCATCTACTGGTaGCTCCAAATAGCTCCTATA +
Preference number: 2 (lower is better)
Translates to: SCRDSSQRLIIYWWLQIALIIYW*LQIAPI
Trigger: TATAGGAGCTATTTGGAGCCACCAGTAGATGATTAG...AGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTGAGAACTGTCTCTGCAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648181.1
ENST00000648891.1
3UTR-3UTR CCA 90 bp AAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAATACATACTTCTTCATTTTCTTGCTaGGGCAAGGCTCTTTCAGTA +
Preference number: 2 (lower is better)
Translates to: KAGFGQSIATPLYPTIHTSSFSC*GKALSV
Trigger: TACTGAAAGAGCCTTGCCCCAGCAAGAAAATGAAGA...AGTATGTATTGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
3UTR-3UTR CCA 90 bp CAGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAGAAGTTCAATGGTGATCCTCAGGGATTaGAATAGAAACCTTGGGAAG +
Preference number: 2 (lower is better)
Translates to: QRASYSNNTVEAKDRSSMVILRD*NRNLGK
Trigger: CTTCCCAAGGTTTCTATTCCAATCCCTGAGGATCAC...CATTGAACTTCTGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
3UTR-3UTR CCA 90 bp GGCAGGAAAAAGTTGTCTGTCCCTGTACAGCTCAGAAATACTCATAAAAAGGCCGTGATCCTCAGGGATTaGAATAGAAACCTTGGGAAG +
Preference number: 2 (lower is better)
Translates to: GRKKLSVPVQLRNTHKKAVILRD*NRNLGK
Trigger: CTTCCCAAGGTTTCTATTCCAATCCCTGAGGATCAC...GGCCTTTTTATGAGTATTTCTGAGCTGTACAGGGACAGACAACTTTTTCCTGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
3UTR-3UTR TCA 90 bp ACTATCAAGATCAGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAATAGGTAGAGTAGTCTaGGAATTTCAGTCCTGGCTG +
Preference number: 2 (lower is better)
Translates to: TIKIRGHHTAITQLKPRTIGRVV*EFQSWL
Trigger: CAGCCAGGACTGAAATTCTCAGACTACTCTACCTAT...TGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCTGATCTTGATAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
3UTR-3UTR TCA 90 bp TCTATACACCAGGCAGGAAAAAGTTGTCTGTCCCTGTACAGCTCAGAAATACTCTGTGATGGTATCTTTTaGGTCTGCATTGGTCAGCTT +
Preference number: 2 (lower is better)
Translates to: SIHQAGKSCLSLYSSEILCDGIF*VCIGQL
Trigger: AAGCTGACCAATGCAGACTCAAAAGATACCATCACA...GAGTATTTCTGAGCTGTACAGGGACAGACAACTTTTTCCTGCCTGGTGTATAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000636666.1
ENST00000644342.1
ENST00000646800.1
3UTR-3UTR TCA 90 bp CAGAGACAGTTCTCAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTCCTATCCTGAAGGCACAGTTTaGATACAAATAAACCTCTAC +
Preference number: 2 (lower is better)
Translates to: QRQFSEANHLLVAPNSSYPEGTV*IQINLY
Trigger: GTAGAGGTTTATTTGTATTCAAACTGTGCCTTCAGG...ATAGGAGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTGAGAACTGTCTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648181.1
ENST00000648891.1
3UTR-3UTR TCA 90 bp AAAGTAGAGGTGGCACTTTTTGAGAGACTTGTGATCCTCAGGGATTGGAATAGATTGCACACCCCTAAGTaGTATGTATCAGGGAGAAAG +
Preference number: 2 (lower is better)
Translates to: KVEVALFERLVILRDWNRLHTPK*YVSGRK
Trigger: CTTTCTCCCTGATACATATCACTTAGGGGTGTGCAA...TCTATTCCAATCCCTGAGGATCACAAGTCTCTCAAAAAGTGCCACCTCTACTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646800.1
3UTR-3UTR GCA 90 bp AAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAATACATACTATTTCTTCATTTTCTTaGTGGGGCAAGGCTCTTTCA +
Preference number: 2 (lower is better)
Translates to: KAGFGQSIATPLYPTIHTISSFS*WGKALS
Trigger: TGAAAGAGCCTTGCCCCAGCAAGAAAATGAAGAAAT...AGTATGTATTGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
3UTR-3UTR CCA 90 bp AATCTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCGGAGAAGGGCAGAGTTaGGGTAGGTTAGTTCCTGAG +
Preference number: 2 (lower is better)
Translates to: NLESLKSDYGRLASLSFCGEGQS*GRLVPE
Trigger: CTCAGGAACTAACCTACCCCAACTCTGCCCTTCTCC...GCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
3UTR-3UTR CCA 90 bp CAGATATCTGAAGCAACTTCCATGTCTTTGACCCAAAGAAGCTCCAAAAAGAAAGAAGTCCCACTAAGCTaGCTTTGGCTTCCAACACAG +
Preference number: 2 (lower is better)
Translates to: QISEATSMSLTQRSSKKKEVPLS*LWLPTQ
Trigger: CTGTGTTGGAAGCCAAAGCCAGCTTAGTGGGACTTC...TTTCTTTTTGGAGCTTCTTTGGGTCAAAGACATGGAAGTTGCTTCAGATATCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR-3UTR CCA 90 bp ATTACTTTGGTGCTGCCAATCACTAATTGGGCAATGCCAATAATGAAGCATTCTCAGAAAAGCTGGCTTTaGGCAGTCCATTGCTACTCC +
Preference number: 2 (lower is better)
Translates to: ITLVLPITNWAMPIMKHSQKSWL*AVHCYS
Trigger: GGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTG...AGAATGCTTCATTATTGGCATTGCCCAATTAGTGATTGGCAGCACCAAAGTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
3UTR-3UTR CCA 90 bp GACATTAACCAAATCATCCATATTGGTACATTCAAGTGCCATAAAAAGCAAGCTAATTTCAGTCCTGGCTaGAGGCTAAGGGGCACCAGC +
Preference number: 2 (lower is better)
Translates to: DINQIIHIGTFKCHKKQANFSPG*RLRGTS
Trigger: GCTGGTGCCCCTTAGCCTCCAGCCAGGACTGAAATT...AGCTTGCTTTTTATGGCACTTGAATGTACCAATATGGATGATTTGGTTAATGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
3UTR-3UTR CCA 90 bp TTCAACACAAGTACACGAACAAACAGGTCTGAAGTATATCAGGAAAACAAAGTAAATTTCAGTCCTGGCTaGAGGCTAAGGGGCACCAGC +
Preference number: 2 (lower is better)
Translates to: FNTSTRTNRSEVYQENKVNFSPG*RLRGTS
Trigger: GCTGGTGCCCCTTAGCCTCCAGCCAGGACTGAAATT...TACTTTGTTTTCCTGATATACTTCAGACCTGTTTGTTCGTGTACTTGTGTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
3UTR-3UTR CCA 90 bp ACATTTATTCCCTCCATTTTCACAATTGGTCATGTGGACAAAGTACTCACTCCTGGTCACCATTTGAGGTaGGTACTGTCACCTCGATGT +
Preference number: 2 (lower is better)
Translates to: TFIPSIFTIGHVDKVLTPGHHLR*VLSPRC
Trigger: ACATCGAGGTGACAGTACCCACCTCAAATGGTGACC...AGGAGTGAGTACTTTGTCCACATGACCAATTGTGAAAATGGAGGGAATAAATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648891.1
3UTR-3UTR CCA 90 bp AAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAATACATACTCTGCCAATCACTAATTaGGCAATGCCAATAATGAAG +
Preference number: 2 (lower is better)
Translates to: KAGFGQSIATPLYPTIHTLPITN*AMPIMK
Trigger: CTTCATTATTGGCATTGCCCAATTAGTGATTGGCAG...AGTATGTATTGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
3UTR-3UTR CCA 90 bp AGAAGTCAACATGCAAACAGAGGACACATACTTGTCACAAGTGAACTTGAGGTCGTGATCCTCAGGGATTaGAATAGAAACCTTGGGAAG +
Preference number: 2 (lower is better)
Translates to: RSQHANRGHILVTSELEVVILRD*NRNLGK
Trigger: CTTCCCAAGGTTTCTATTCCAATCCCTGAGGATCAC...GACCTCAAGTTCACTTGTGACAAGTATGTGTCCTCTGTTTGCATGTTGACTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
3UTR CAA 90 bp TTCAAACATTCACAGTATCAGATATCTGAAGCAACTTCCATGTCTTaGACCCAAAGAAGCTCCAAAAAGAAAGCAGGAGGGAGAGGGGAA +
Preference number: 2 (lower is better)
Translates to: FKHSQYQISEATSMS*TQRSSKKKAGGRGE
Trigger: TTCCCCTCTCCCTCCTGCTTTCTTTTTGGAGCTTCTTTGGGTCAAAGACATGGAAGTTGCTTCAGATATCTGATACTGTGAATGTTTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR CAA 90 bp CTTCAATGCAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTaGTACCCCACAATACATACTCTACAAAGAGTAACATTTGACAGA +
Preference number: 2 (lower is better)
Translates to: LQCRKAGFGQSIATP*YPTIHTLQRVTFDR
Trigger: TCTGTCAAATGTTACTCTTTGTAGAGTATGTATTGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTGCATTGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
3UTR-3UTR TCA 90 bp AAAAATGCACACACCCGAAATGAGTTCAAACCAGCCGAAACAAAACTCAGGCAGATAATCTTGAAAGTCTaGAGTCTGACTATGGCAGGT +
Preference number: 2 (lower is better)
Translates to: KNAHTRNEFKPAETKLRQIILKV*SLTMAG
Trigger: ACCTGCCATAGTCAGACTTCAGACTTTCAAGATTAT...CTGCCTGAGTTTTGTTTCGGCTGGTTTGAACTCATTTCGGGTGTGTGCATTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR-3UTR TCA 90 bp GCCACATTCCTTGTCATTTGGGATGAAAGAAAGGCCCAGGATCAGACAGAAGTAACAGTATCAGATATCTaGAGCAACTTCCATGTCTTT +
Preference number: 2 (lower is better)
Translates to: ATFLVIWDERKAQDQTEVTVSDI*SNFHVF
Trigger: AAAGACATGGAAGTTGCTTCAGATATCTGATACTGT...TACTTCTGTCTGATCCTGGGCCTTTCTTTCATCCCAAATGACAAGGAATGTGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR-3UTR TCA 90 bp AAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAATACATACTAGATACCTTTTTGAGTaGGTGAACATTAGAACGGAA +
Preference number: 2 (lower is better)
Translates to: KAGFGQSIATPLYPTIHTRYLFE*VNIRTE
Trigger: TTCCGTTCTAATGTTCACTCACTCAAAAAGGTATCT...AGTATGTATTGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
3UTR-3UTR TCA 90 bp TCTATACACCAGGCAGGAAAAAGTTGTCTGTCCCTGTACAGCTCAGAAATACTCTTTTTGAGAGACTTGTaGTCCTCAGGGATTGGAATA +
Preference number: 2 (lower is better)
Translates to: SIHQAGKSCLSLYSSEILFLRDL*SSGIGI
Trigger: TATTCCAATCCCTGAGGATCACAAGTCTCTCAAAAA...GAGTATTTCTGAGCTGTACAGGGACAGACAACTTTTTCCTGCCTGGTGTATAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
3UTR-3UTR GCA 90 bp ATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAGTCAACTTTGGGCAGTCCATTaGTACTCCTTTGTACCCCAC +
Preference number: 2 (lower is better)
Translates to: IEKFLFPLQFLYSAIHSQLWAVH*YSFVPH
Trigger: GTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAG...TTGACTATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
3UTR-3UTR GCA 90 bp AAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAATACATACTGGAAGATTACCAACCTaGCATATGCTTAATTCTGAT +
Preference number: 2 (lower is better)
Translates to: KAGFGQSIATPLYPTIHTGRLPT*HMLNSD
Trigger: ATCAGAATTAAGCATATGGCAGGTTGGTAATCTTCC...AGTATGTATTGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
3UTR-3UTR GCA 90 bp AAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAATACATACTAGTTTTTATTCCCCCTaGAATTTCTGTACTCTGCTA +
Preference number: 2 (lower is better)
Translates to: KAGFGQSIATPLYPTIHTSFYSP*NFCTLL
Trigger: TAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACT...AGTATGTATTGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
3UTR-3UTR CCA 90 bp GGACACATACTTGTCACAAGTGAACTTGAGGTCACAAAGCCATTGATTAAAAACTCAATGCAGAAAAGCTaGCTTTGGGCAGTCCATTGC +
Preference number: 2 (lower is better)
Translates to: GHILVTSELEVTKPLIKNSMQKS*LWAVHC
Trigger: GCAATGGACTGCCCAAAGCCAGCTTTTCTGCATTGA...GTTTTTAATCAATGGCTTTGTGACCTCAAGTTCACTTGTGACAAGTATGTGTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
3UTR-3UTR CCA 90 bp CAGAGACAGTTCTCAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTCCTATCACTGTATCGAAATTTaGATCCTAGCGCAAGAAATT +
Preference number: 2 (lower is better)
Translates to: QRQFSEANHLLVAPNSSYHCIEI*ILAQEI
Trigger: AATTTCTTGCGCTAGGATCCAAATTTCGATACAGTG...ATAGGAGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTGAGAACTGTCTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642643.1
ENST00000648891.1
3UTR-3UTR CCA 90 bp TCTATACACCAGGCAGGAAAAAGTTGTCTGTCCCTGTACAGCTCAGAAATACTCCTGCCAATCACTAATTaGGCAATGCCAATAATGAAG +
Preference number: 2 (lower is better)
Translates to: SIHQAGKSCLSLYSSEILLPITN*AMPIMK
Trigger: CTTCATTATTGGCATTGCCCAATTAGTGATTGGCAG...GAGTATTTCTGAGCTGTACAGGGACAGACAACTTTTTCCTGCCTGGTGTATAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
3UTR-3UTR TCA 90 bp AAAAATGCACACACCCGAAATGAGTTCAAACCAGCCGAAACAAAACTCAGGCAGACAGTATCAGATATCTaGAGCAACTTCCATGTCTTT +
Preference number: 2 (lower is better)
Translates to: KNAHTRNEFKPAETKLRQTVSDI*SNFHVF
Trigger: AAAGACATGGAAGTTGCTTCAGATATCTGATACTGT...CTGCCTGAGTTTTGTTTCGGCTGGTTTGAACTCATTTCGGGTGTGTGCATTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR-3UTR TCA 90 bp GGACACATACTTGTCACAAGTGAACTTGAGGTCACAAAGCCATTGATTAAAAACATAGGTAGAGTAGTCTaGGAATTTCAGTCCTGGCTG +
Preference number: 2 (lower is better)
Translates to: GHILVTSELEVTKPLIKNIGRVV*EFQSWL
Trigger: CAGCCAGGACTGAAATTCTCAGACTACTCTACCTAT...GTTTTTAATCAATGGCTTTGTGACCTCAAGTTCACTTGTGACAAGTATGTGTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
3UTR-3UTR TCA 90 bp TCTATACACCAGGCAGGAAAAAGTTGTCTGTCCCTGTACAGCTCAGAAATACTCACGAACAAACAGGTCTaGAGTATATCAGGAAAACAA +
Preference number: 2 (lower is better)
Translates to: SIHQAGKSCLSLYSSEILTNKQV*SISGKQ
Trigger: TTGTTTTCCTGATATACTTCAGACCTGTTTGTTCGT...GAGTATTTCTGAGCTGTACAGGGACAGACAACTTTTTCCTGCCTGGTGTATAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
3UTR-3UTR TCA 90 bp TTAGGGGCCTCCTTGGTTTACTATATAATTGTGGGGAACCAGTCCAGATATTTCAAACTTTCTAGTCCCTaGAGGCACAGTTTGAATACA +
Preference number: 2 (lower is better)
Translates to: LGASLVYYIIVGNQSRYFKLSSP*RHSLNT
Trigger: TGTATTCAAACTGTGCCTTCAGGGACTAGAAAGTTT...GAAATATCTGGACTGGTTCCCCACAATTATATAGTAAACCAAGGAGGCCCCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000645184.1
ENST00000648181.1
3UTR-3UTR TCA 90 bp TCTATACACCAGGCAGGAAAAAGTTGTCTGTCCCTGTACAGCTCAGAAATACTCAGATACCTTTTTGAGTaGGTGAACATTAGAACGGAA +
Preference number: 2 (lower is better)
Translates to: SIHQAGKSCLSLYSSEILRYLFE*VNIRTE
Trigger: TTCCGTTCTAATGTTCACTCACTCAAAAAGGTATCT...GAGTATTTCTGAGCTGTACAGGGACAGACAACTTTTTCCTGCCTGGTGTATAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
3UTR-3UTR GCA 90 bp GACATTAACCAAATCATCCATATTGGTACATTCAAGTGCCATAAAAAGCAAGCTCTTTGGGCAGTCCATTaGTACTCCTTTGTACCCCAC +
Preference number: 2 (lower is better)
Translates to: DINQIIHIGTFKCHKKQALWAVH*YSFVPH
Trigger: GTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAG...AGCTTGCTTTTTATGGCACTTGAATGTACCAATATGGATGATTTGGTTAATGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
3UTR-3UTR GCA 90 bp CAGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAGAAGTTCAATGGGAAGATTACCAACCTaGCATATGCTTAATTCTGAT +
Preference number: 2 (lower is better)
Translates to: QRASYSNNTVEAKDRSSMGRLPT*HMLNSD
Trigger: ATCAGAATTAAGCATATGGCAGGTTGGTAATCTTCC...CATTGAACTTCTGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
3UTR-3UTR GCA 90 bp TCTATACACCAGGCAGGAAAAAGTTGTCTGTCCCTGTACAGCTCAGAAATACTCAGTTTTTATTCCCCCTaGAATTTCTGTACTCTGCTA +
Preference number: 2 (lower is better)
Translates to: SIHQAGKSCLSLYSSEILSFYSP*NFCTLL
Trigger: TAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACT...GAGTATTTCTGAGCTGTACAGGGACAGACAACTTTTTCCTGCCTGGTGTATAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
3UTR-3UTR GCA 90 bp AGAAGTCAACATGCAAACAGAGGACACATACTTGTCACAAGTGAACTTGAGGTCCACTGGCTTTCCCCTTaGTATGTTATTTATTCTTCC +
Preference number: 2 (lower is better)
Translates to: RSQHANRGHILVTSELEVHWLSP*YVIYSS
Trigger: GGAAGAATAAATAACATAGCAAGGGGAAAGCCAGTG...GACCTCAAGTTCACTTGTGACAAGTATGTGTCCTCTGTTTGCATGTTGACTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
3UTR-3UTR GCA 90 bp AAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAATACATACTTGTAACACAATAGGGTaGTCAATAGATACCTTTTTG +
Preference number: 2 (lower is better)
Translates to: KAGFGQSIATPLYPTIHTCNTIG*SIDTFL
Trigger: CAAAAAGGTATCTATTGAGCACCCTATTGTGTTACA...AGTATGTATTGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
3UTR-3UTR GCA 90 bp TTAAACTTCAATGCAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTATTTCTTCATTTTCTTaGTGGGGCAAGGCTCTTTCA +
Preference number: 2 (lower is better)
Translates to: LNFNAEKLALGSPLLLLCISSFS*WGKALS
Trigger: TGAAAGAGCCTTGCCCCAGCAAGAAAATGAAGAAAT...ACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTGCATTGAAGTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
3UTR-3UTR CCA 90 bp AGAAGTCAACATGCAAACAGAGGACACATACTTGTCACAAGTGAACTTGAGGTCCTTTTGAGTCTGCATTaGTCAGCTTCATCCAATACA +
Preference number: 2 (lower is better)
Translates to: RSQHANRGHILVTSELEVLLSLH*SASSNT
Trigger: TGTATTGGATGAAGCTGACCAATGCAGACTCAAAAG...GACCTCAAGTTCACTTGTGACAAGTATGTGTCCTCTGTTTGCATGTTGACTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636666.1
ENST00000644342.1
ENST00000646800.1
3UTR-3UTR CCA 90 bp GAATCCGATGGTACTTTCATACTGCTCTTGCTCTCCAGGCCGAATCTTGATGAACTTTTACTTCTATTTTaGAGCACTCTTCAAGTCCTT +
Preference number: 2 (lower is better)
Translates to: ESDGTFILLLLSRPNLDELLLLF*STLQVL
Trigger: AAGGACTTGAAGAGTGCTCCAAAATAGAAGTAAAAG...TTCATCAAGATTCGGCCTGGAGAGCAAGAGCAGTATGAAAGTACCATCGGATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643155.1
3UTR-3UTR CCA 90 bp ACTATCAAGATCAGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACACTGCCAATCACTAATTaGGCAATGCCAATAATGAAG +
Preference number: 2 (lower is better)
Translates to: TIKIRGHHTAITQLKPRTLPITN*AMPIMK
Trigger: CTTCATTATTGGCATTGCCCAATTAGTGATTGGCAG...TGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCTGATCTTGATAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
3UTR-3UTR CCA 90 bp TCTATACACCAGGCAGGAAAAAGTTGTCTGTCCCTGTACAGCTCAGAAATACTCAGGAATACGAGGAGATaGAAAAGTACTAAAGTAGAG +
Preference number: 2 (lower is better)
Translates to: SIHQAGKSCLSLYSSEILRNTRR*KSTKVE
Trigger: CTCTACTTTAGTACTTTTCCATCTCCTCGTATTCCT...GAGTATTTCTGAGCTGTACAGGGACAGACAACTTTTTCCTGCCTGGTGTATAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
3UTR-3UTR CCA 90 bp CAGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAGAAGTTCAATGAGGAATACGAGGAGATaGAAAAGTACTAAAGTAGAG +
Preference number: 2 (lower is better)
Translates to: QRASYSNNTVEAKDRSSMRNTRR*KSTKVE
Trigger: CTCTACTTTAGTACTTTTCCATCTCCTCGTATTCCT...CATTGAACTTCTGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
3UTR CAA 90 bp GAAATGGCCTCTCCTTTGACTCTCAATAAAGATCTCCGAGGACTCTaGCTGCATTTCAGAAAACTGAAAAGTATCATTGGCTTAGACTTT +
Preference number: 2 (lower is better)
Translates to: EMASPLTLNKDLRGL*LHFRKLKSIIGLDF
Trigger: AAAGTCTAAGCCAATGATACTTTTCAGTTTTCTGAAATGCAGCAAGAGTCCTCGGAGATCTTTATTGAGAGTCAAAGGAGAGGCCATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636666.1
ENST00000644342.1
ENST00000646800.1
3UTR CAA 90 bp CAATACAAGGGCTTGGCCATTCTCCTCTTAATCATTCTTACCCTATaGATAGAAGAAATGGCCTCTCCTTTGACTCTCAATAAAGATCTC +
Preference number: 2 (lower is better)
Translates to: QYKGLAILLLIILTL*IEEMASPLTLNKDL
Trigger: GAGATCTTTATTGAGAGTCAAAGGAGAGGCCATTTCTTCTATCAATAGGGTAAGAATGATTAAGAGGAGAATGGCCAAGCCCTTGTATTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636666.1
ENST00000644342.1
ENST00000646800.1
3UTR-3UTR TCA 90 bp ACTATCAAGATCAGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAACGAACAAACAGGTCTaGAGTATATCAGGAAAACAA +
Preference number: 2 (lower is better)
Translates to: TIKIRGHHTAITQLKPRTTNKQV*SISGKQ
Trigger: TTGTTTTCCTGATATACTTCAGACCTGTTTGTTCGT...TGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCTGATCTTGATAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
3UTR-3UTR TCA 90 bp AGAAGTCAACATGCAAACAGAGGACACATACTTGTCACAAGTGAACTTGAGGTCACGAACAAACAGGTCTaGAGTATATCAGGAAAACAA +
Preference number: 2 (lower is better)
Translates to: RSQHANRGHILVTSELEVTNKQV*SISGKQ
Trigger: TTGTTTTCCTGATATACTTCAGACCTGTTTGTTCGT...GACCTCAAGTTCACTTGTGACAAGTATGTGTCCTCTGTTTGCATGTTGACTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
3UTR-3UTR TCA 90 bp GAGACATTAACCAAATCATCCATATTGGTACATTCAAGTGCCATAAAAAGCAAGAACAGGTTAGGCATGTaGGTTGTCCTGAAGAGAGAG +
Preference number: 2 (lower is better)
Translates to: ETLTKSSILVHSSAIKSKNRLGM*VVLKRE
Trigger: CTCTCTCTTCAGGACAACTCACATGCCTAACCTGTT...CTTGCTTTTTATGGCACTTGAATGTACCAATATGGATGATTTGGTTAATGTCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
3UTR-3UTR TCA 90 bp GACATTAACCAAATCATCCATATTGGTACATTCAAGTGCCATAAAAAGCAAGCTAACAGGTTAGGCATGTaGGTTGTCCTGAAGAGAGAG +
Preference number: 2 (lower is better)
Translates to: DINQIIHIGTFKCHKKQANRLGM*VVLKRE
Trigger: CTCTCTCTTCAGGACAACTCACATGCCTAACCTGTT...AGCTTGCTTTTTATGGCACTTGAATGTACCAATATGGATGATTTGGTTAATGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
3UTR-3UTR TCA 90 bp ACTATCAAGATCAGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAAGATACCTTTTTGAGTaGGTGAACATTAGAACGGAA +
Preference number: 2 (lower is better)
Translates to: TIKIRGHHTAITQLKPRTRYLFE*VNIRTE
Trigger: TTCCGTTCTAATGTTCACTCACTCAAAAAGGTATCT...TGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCTGATCTTGATAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
3UTR-3UTR GCA 90 bp AGAAGTCAACATGCAAACAGAGGACACATACTTGTCACAAGTGAACTTGAGGTCGGAAGATTACCAACCTaGCATATGCTTAATTCTGAT +
Preference number: 2 (lower is better)
Translates to: RSQHANRGHILVTSELEVGRLPT*HMLNSD
Trigger: ATCAGAATTAAGCATATGGCAGGTTGGTAATCTTCC...GACCTCAAGTTCACTTGTGACAAGTATGTGTCCTCTGTTTGCATGTTGACTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
3UTR-3UTR GCA 90 bp GAAGTCAACATGCAAACAGAGGACACATACTTGTCACAAGTGAACTTGAGGTCAGGAAGATTACCAACCTaGCATATGCTTAATTCTGAT +
Preference number: 2 (lower is better)
Translates to: EVNMQTEDTYLSQVNLRSGRLPT*HMLNSD
Trigger: ATCAGAATTAAGCATATGGCAGGTTGGTAATCTTCC...TGACCTCAAGTTCACTTGTGACAAGTATGTGTCCTCTGTTTGCATGTTGACTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
3UTR-3UTR GCA 90 bp ACTATCAAGATCAGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAGGAAGATTACCAACCTaGCATATGCTTAATTCTGAT +
Preference number: 2 (lower is better)
Translates to: TIKIRGHHTAITQLKPRTGRLPT*HMLNSD
Trigger: ATCAGAATTAAGCATATGGCAGGTTGGTAATCTTCC...TGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCTGATCTTGATAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
3UTR-3UTR GCA 90 bp TTGGCAGTGTTACCTTTAGGTAATACAAAGCTGGAATGCCCAATATTTTTCCTCTCAACACTGGTTCTTTaGACACCCCTAAGTGATATG +
Preference number: 2 (lower is better)
Translates to: LAVLPLGNTKLECPIFFLSTLVL*TPLSDM
Trigger: CATATCACTTAGGGGTGTGCAAAGAACCAGTGTTGA...GAGGAAAAATATTGGGCATTCCAGCTTTGTATTACCTAAAGGTAACACTGCCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646800.1
3UTR-3UTR GCA 90 bp AAAGTAGAGGTGGCACTTTTTGAGAGACTTGTGATCCTCAGGGATTGGAATAGAAGTTTTTATTCCCCCTaGAATTTCTGTACTCTGCTA +
Preference number: 2 (lower is better)
Translates to: KVEVALFERLVILRDWNRSFYSP*NFCTLL
Trigger: TAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACT...TCTATTCCAATCCCTGAGGATCACAAGTCTCTCAAAAAGTGCCACCTCTACTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
3UTR-3UTR GCA 90 bp TCTATACACCAGGCAGGAAAAAGTTGTCTGTCCCTGTACAGCTCAGAAATACTCTGTAACACAATAGGGTaGTCAATAGATACCTTTTTG +
Preference number: 2 (lower is better)
Translates to: SIHQAGKSCLSLYSSEILCNTIG*SIDTFL
Trigger: CAAAAAGGTATCTATTGAGCACCCTATTGTGTTACA...GAGTATTTCTGAGCTGTACAGGGACAGACAACTTTTTCCTGCCTGGTGTATAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
3UTR-3UTR CCA 90 bp GACATTAACCAAATCATCCATATTGGTACATTCAAGTGCCATAAAAAGCAAGCTTCAATGCAGAAAAGCTaGCTTTGGGCAGTCCATTGC +
Preference number: 2 (lower is better)
Translates to: DINQIIHIGTFKCHKKQASMQKS*LWAVHC
Trigger: GCAATGGACTGCCCAAAGCCAGCTTTTCTGCATTGA...AGCTTGCTTTTTATGGCACTTGAATGTACCAATATGGATGATTTGGTTAATGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
3UTR-3UTR CCA 90 bp ATCTTAATTCAGAGAAGGGTTTATGTACAGATCTTGAGTAAATCTGTGTTCCAGTCAATGCAGAAAAGCTaGCTTTGGGCAGTCCATTGC +
Preference number: 2 (lower is better)
Translates to: ILIQRRVYVQILSKSVFQSMQKS*LWAVHC
Trigger: GCAATGGACTGCCCAAAGCCAGCTTTTCTGCATTGA...CTGGAACACAGATTTACTCAAGATCTGTACATAAACCCTTCTCTGAATTAAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
3UTR-3UTR CCA 90 bp GAGACATTAACCAAATCATCCATATTGGTACATTCAAGTGCCATAAAAAGCAAGTCAATGCAGAAAAGCTaGCTTTGGGCAGTCCATTGC +
Preference number: 2 (lower is better)
Translates to: ETLTKSSILVHSSAIKSKSMQKS*LWAVHC
Trigger: GCAATGGACTGCCCAAAGCCAGCTTTTCTGCATTGA...CTTGCTTTTTATGGCACTTGAATGTACCAATATGGATGATTTGGTTAATGTCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
3UTR-3UTR CCA 90 bp CTTCATCCAATACAAGGGCTTGGCCATTCTCCTCTTAATCATTCTTACCCTATTCTGCCAATCACTAATTaGGCAATGCCAATAATGAAG +
Preference number: 2 (lower is better)
Translates to: LHPIQGLGHSPLNHSYPILPITN*AMPIMK
Trigger: CTTCATTATTGGCATTGCCCAATTAGTGATTGGCAG...AATAGGGTAAGAATGATTAAGAGGAGAATGGCCAAGCCCTTGTATTGGATGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644342.1
ENST00000646800.1
3UTR-3UTR CCA 90 bp TTAAACTTCAATGCAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTAGGAATACGAGGAGATaGAAAAGTACTAAAGTAGAG +
Preference number: 2 (lower is better)
Translates to: LNFNAEKLALGSPLLLLCRNTRR*KSTKVE
Trigger: CTCTACTTTAGTACTTTTCCATCTCCTCGTATTCCT...ACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTGCATTGAAGTTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
3UTR CAA 90 bp CATTTAATCTTTGAAGATCTCTTCTATACACCAGGCAGGAAAAAGTaGTCTGTCCCTGTACAGCTCAGAAATACTCATAAAAAGGCCACA +
Preference number: 2 (lower is better)
Translates to: HLIFEDLFYTPGRKK*SVPVQLRNTHKKAT
Trigger: TGTGGCCTTTTTATGAGTATTTCTGAGCTGTACAGGGACAGACAACTTTTTCCTGCCTGGTGTATAGAAGAGATCTTCAAAGATTAAATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
3UTR-3UTR TCA 90 bp TTCAACACAAGTACACGAACAAACAGGTCTGAAGTATATCAGGAAAACAAAGTAATAGGTAGAGTAGTCTaGGAATTTCAGTCCTGGCTG +
Preference number: 2 (lower is better)
Translates to: FNTSTRTNRSEVYQENKVIGRVV*EFQSWL
Trigger: CAGCCAGGACTGAAATTCTCAGACTACTCTACCTAT...TACTTTGTTTTCCTGATATACTTCAGACCTGTTTGTTCGTGTACTTGTGTTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
3UTR-3UTR TCA 90 bp GACATTAACCAAATCATCCATATTGGTACATTCAAGTGCCATAAAAAGCAAGCTATAGGTAGAGTAGTCTaGGAATTTCAGTCCTGGCTG +
Preference number: 2 (lower is better)
Translates to: DINQIIHIGTFKCHKKQAIGRVV*EFQSWL
Trigger: CAGCCAGGACTGAAATTCTCAGACTACTCTACCTAT...AGCTTGCTTTTTATGGCACTTGAATGTACCAATATGGATGATTTGGTTAATGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
3UTR-3UTR TCA 90 bp CACTGTATCGAAATTTGGATCCTAGCGCAAGAAATTTGCTTTTGGGAATGGTGTAATCTGAAAAACGTGTaGTGTTCTACACAGACTTTC +
Preference number: 2 (lower is better)
Translates to: HCIEIWILAQEICFWEWCNLKNV*CSTQTF
Trigger: GAAAGTCTGTGTAGAACATCACACGTTTTTCAGATT...ACACCATTCCCAAAAGCAAATTTCTTGCGCTAGGATCCAAATTTCGATACAGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
3UTR-3UTR GCA 90 bp TTCAACACAAGTACACGAACAAACAGGTCTGAAGTATATCAGGAAAACAAAGTAGCACGTTCCTGTGTCTaGTTTCACAGTAGAAGATCA +
Preference number: 2 (lower is better)
Translates to: FNTSTRTNRSEVYQENKVARSCV*FHSRRS
Trigger: TGATCTTCTACTGTGAAAGCAGACACAGGAACGTGC...TACTTTGTTTTCCTGATATACTTCAGACCTGTTTGTTCGTGTACTTGTGTTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
3UTR-3UTR TCA 90 bp GGACACATACTTGTCACAAGTGAACTTGAGGTCACAAAGCCATTGATTAAAAACACGAACAAACAGGTCTaGAGTATATCAGGAAAACAA +
Preference number: 2 (lower is better)
Translates to: GHILVTSELEVTKPLIKNTNKQV*SISGKQ
Trigger: TTGTTTTCCTGATATACTTCAGACCTGTTTGTTCGT...GTTTTTAATCAATGGCTTTGTGACCTCAAGTTCACTTGTGACAAGTATGTGTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
3UTR-3UTR TCA 90 bp TTGGCAGTGTTACCTTTAGGTAATACAAAGCTGGAATGCCCAATATTTTTCCTCGACAGATGTTATCTATaGAAGGAAAAACTTGGCTCT +
Preference number: 2 (lower is better)
Translates to: LAVLPLGNTKLECPIFFLDRCYL*KEKLGS
Trigger: AGAGCCAAGTTTTTCCTTTCATAGATAACATCTGTC...GAGGAAAAATATTGGGCATTCCAGCTTTGTATTACCTAAAGGTAACACTGCCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000646800.1
3UTR-3UTR GCA 90 bp GGACACATACTTGTCACAAGTGAACTTGAGGTCACAAAGCCATTGATTAAAAACGGAAGATTACCAACCTaGCATATGCTTAATTCTGAT +
Preference number: 2 (lower is better)
Translates to: GHILVTSELEVTKPLIKNGRLPT*HMLNSD
Trigger: ATCAGAATTAAGCATATGGCAGGTTGGTAATCTTCC...GTTTTTAATCAATGGCTTTGTGACCTCAAGTTCACTTGTGACAAGTATGTGTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
3UTR-3UTR CCA 90 bp TTCAACACAAGTACACGAACAAACAGGTCTGAAGTATATCAGGAAAACAAAGTATCTTCATTTTCTTGCTaGGGCAAGGCTCTTTCAGTA +
Preference number: 2 (lower is better)
Translates to: FNTSTRTNRSEVYQENKVSSFSC*GKALSV
Trigger: TACTGAAAGAGCCTTGCCCCAGCAAGAAAATGAAGA...TACTTTGTTTTCCTGATATACTTCAGACCTGTTTGTTCGTGTACTTGTGTTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
3UTR-3UTR GCA 90 bp GAGACATTAACCAAATCATCCATATTGGTACATTCAAGTGCCATAAAAAGCAAGCACTGGCTTTCCCCTTaGTATGTTATTTATTCTTCC +
Preference number: 2 (lower is better)
Translates to: ETLTKSSILVHSSAIKSKHWLSP*YVIYSS
Trigger: GGAAGAATAAATAACATAGCAAGGGGAAAGCCAGTG...CTTGCTTTTTATGGCACTTGAATGTACCAATATGGATGATTTGGTTAATGTCTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
3UTR-3UTR GCA 90 bp TTCAACACAAGTACACGAACAAACAGGTCTGAAGTATATCAGGAAAACAAAGTAATTTCTTCATTTTCTTaGTGGGGCAAGGCTCTTTCA +
Preference number: 2 (lower is better)
Translates to: FNTSTRTNRSEVYQENKVISSFS*WGKALS
Trigger: TGAAAGAGCCTTGCCCCAGCAAGAAAATGAAGAAAT...TACTTTGTTTTCCTGATATACTTCAGACCTGTTTGTTCGTGTACTTGTGTTGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
3UTR-3UTR GCA 90 bp GACATTAACCAAATCATCCATATTGGTACATTCAAGTGCCATAAAAAGCAAGCTGGAAGATTACCAACCTaGCATATGCTTAATTCTGAT +
Preference number: 2 (lower is better)
Translates to: DINQIIHIGTFKCHKKQAGRLPT*HMLNSD
Trigger: ATCAGAATTAAGCATATGGCAGGTTGGTAATCTTCC...AGCTTGCTTTTTATGGCACTTGAATGTACCAATATGGATGATTTGGTTAATGTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
3UTR-3UTR GCA 90 bp ATCTTAATTCAGAGAAGGGTTTATGTACAGATCTTGAGTAAATCTGTGTTCCAGAGTTTTTATTCCCCCTaGAATTTCTGTACTCTGCTA +
Preference number: 2 (lower is better)
Translates to: ILIQRRVYVQILSKSVFQSFYSP*NFCTLL
Trigger: TAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACT...CTGGAACACAGATTTACTCAAGATCTGTACATAAACCCTTCTCTGAATTAAGAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
3UTR-3UTR GCA 90 bp GAGACATTAACCAAATCATCCATATTGGTACATTCAAGTGCCATAAAAAGCAAGAGTTTTTATTCCCCCTaGAATTTCTGTACTCTGCTA +
Preference number: 2 (lower is better)
Translates to: ETLTKSSILVHSSAIKSKSFYSP*NFCTLL
Trigger: TAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACT...CTTGCTTTTTATGGCACTTGAATGTACCAATATGGATGATTTGGTTAATGTCTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
3UTR-3UTR CCA 90 bp TTCAACACAAGTACACGAACAAACAGGTCTGAAGTATATCAGGAAAACAAAGTAAGGAATACGAGGAGATaGAAAAGTACTAAAGTAGAG +
Preference number: 2 (lower is better)
Translates to: FNTSTRTNRSEVYQENKVRNTRR*KSTKVE
Trigger: CTCTACTTTAGTACTTTTCCATCTCCTCGTATTCCT...TACTTTGTTTTCCTGATATACTTCAGACCTGTTTGTTCGTGTACTTGTGTTGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
3UTR-3UTR GCA 90 bp TTCAACACAAGTACACGAACAAACAGGTCTGAAGTATATCAGGAAAACAAAGTATGTAACACAATAGGGTaGTCAATAGATACCTTTTTG +
Preference number: 2 (lower is better)
Translates to: FNTSTRTNRSEVYQENKVCNTIG*SIDTFL
Trigger: CAAAAAGGTATCTATTGAGCACCCTATTGTGTTACA...TACTTTGTTTTCCTGATATACTTCAGACCTGTTTGTTCGTGTACTTGTGTTGAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
3UTR-3UTR GCA 90 bp GAGACATTAACCAAATCATCCATATTGGTACATTCAAGTGCCATAAAAAGCAAGTGTAACACAATAGGGTaGTCAATAGATACCTTTTTG +
Preference number: 2 (lower is better)
Translates to: ETLTKSSILVHSSAIKSKCNTIG*SIDTFL
Trigger: CAAAAAGGTATCTATTGAGCACCCTATTGTGTTACA...CTTGCTTTTTATGGCACTTGAATGTACCAATATGGATGATTTGGTTAATGTCTC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
3UTR-3UTR CAA 90 bp TGGGCCGAGGACTTCGGTCTGCCGAATCGACAGCTGCTGCTCCATCGAGGCTCCTTGCCTGGTCTGAGCTaGAGTCCGGCCACTGTATCG +
Preference number: 3 (lower is better)
Translates to: WAEDFGLPNRQLLLHRGSLPGLS*SPATVS
Trigger: CGATACAGTGGCCGGACTCAAGCTCAGACCAGGCAA...GGAGCCTCGATGGAGCAGCAGCTGTCGATTCGGCAGACCGAAGTCCTCGGCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
3UTR GCA 72 bp AATGGCAGGTGCAGAAGTGGGCCGAGGACTTCGGTCTaGCGAATCGACAGCTGCTGCTCCATCGAGGCTCCG +
Preference number: 3 (lower is better)
Translates to: NGRCRSGPRTSV*RIDSCCSIEAP
Trigger: CGGAGCCTCGATGGAGCAGCAGCTGTCGATTCGGCAGACCGAAGTCCTCGGCCCACTTCTGCACCTGCCATT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
3UTR GCA 72 bp TGCTGCTCCATCGAGGCTCCGGGACGCCCGTTTACTTaGTGTACGCTCGAAGTGTGGGGCAGGCCTGTCAAT +
Preference number: 3 (lower is better)
Translates to: CCSIEAPGRPFT*CTLEVWGRPVN
Trigger: ATTGACAGGCCTGCCCCACACTTCGAGCGTACAGCAAGTAAACGGGCGTCCCGGAGCCTCGATGGAGCAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
3UTR TCA 72 bp CAGCCTGGGGCTGAGATCCTGGGCAGAAATTTCCCGTaGGCATCAAAAGGCGTCAGTCAGGCCGCAGCTCTG +
Preference number: 3 (lower is better)
Translates to: QPGAEILGRNFP*ASKGVSQAAAL
Trigger: CAGAGCTGCGGCCTGACTGACGCCTTTTGATGCTCACGGGAAATTTCTGCCCAGGATCTCAGCCCCAGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
3UTR CCA 72 bp CGTGAGCATCAAAAGGCGTCAGTCAGGCCGCAGCTCTaGCTCCAGTTCCCGAGGTTTGTTGTCTCCTCACCC +
Preference number: 3 (lower is better)
Translates to: REHQKASVRPQL*LQFPRFVVSSP
Trigger: GGGTGAGGAGACAACAAACCTCGGGAACTGGAGCCAGAGCTGCGGCCTGACTGACGCCTTTTGATGCTCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
3UTR-3UTR CAA 90 bp GCTCTGGCTCCAGTTCCCGAGGTTTGTTGTCTCCTCACCCCCAGCTGCCAAGCATTGTCATGTGGTGTCTaGTGGGGAGAACGGCTCCTA +
Preference number: 3 (lower is better)
Translates to: ALAPVPEVCCLLTPSCQALSCGV*WGERLL
Trigger: TAGGAGCCGTTCTCCCCACAAGACACCACATGACAA...TGCTTGGCAGCTGGGGGTGAGGAGACAACAAACCTCGGGAACTGGAGCCAGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
3UTR-3UTR CAA 90 bp TGGGCCGAGGACTTCGGTCTGCCGAATCGACAGCTGCTGCTCCATCGAGGCTCCGTGGGGATTTGCCCATaGATGTTAAGAGTTCGGAAG +
Preference number: 3 (lower is better)
Translates to: WAEDFGLPNRQLLLHRGSVGICP*MLRVRK
Trigger: CTTCCGAACTCTTAACATCAATGGGCAAATCCCCAC...GGAGCCTCGATGGAGCAGCAGCTGTCGATTCGGCAGACCGAAGTCCTCGGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
3UTR TCA 72 bp GTCTGTGGATCAGGGCTGGTGCCCTCCCTGGCATTCTaGTACACTCACATCACTGGCTCTGAGAAAGGGCTG +
Preference number: 3 (lower is better)
Translates to: VCGSGLVPSLAF*YTHITGSEKGL
Trigger: CAGCCCTTTCTCAGAGCCAGTGATGTGAGTGTATCAGAATGCCAGGGAGGGCACCAGCCCTGATCCACAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR TCA 72 bp CTACTCCTTCCAAGTCCATGTTCCCCAGTCTGGTCTTaGATTCCTGAGCTTGAGCGATCGGCCGCCTCAGCC +
Preference number: 3 (lower is better)
Translates to: LLLPSPCSPVWS*IPELERSAASA
Trigger: GGCTGAGGCGGCCGATCGCTCAAGCTCAGGAATTCAAGACCAGACTGGGGAACATGGACTTGGAAGGAGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642643.1
3UTR CCA 72 bp GACAGACCTCAGCTGGTGAGTGGGAATGAGCAGGGCTaGGGCTTATACCCCTTGTCATGTGGTGTCTTGTGG +
Preference number: 3 (lower is better)
Translates to: DRPQLVSGNEQG*GLYPLSCGVLW
Trigger: CCACAAGACACCACATGACAAGGGGTATAAGCCCCAGCCCTGCTCATTCCCACTCACCAGCTGAGGTCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR-3UTR CAA 90 bp GCTCTGGCTCCAGTTCCCGAGGTTTGTTGTCTCCTCACCCCCAGCTGCCAAGCACAGTGTCTGTTGGGGTaGGAAATAAATGGGCAGAGA +
Preference number: 3 (lower is better)
Translates to: ALAPVPEVCCLLTPSCQAQCLLG*EINGQR
Trigger: TCTCTGCCCATTTATTTCCAACCCCAACAGACACTG...TGCTTGGCAGCTGGGGGTGAGGAGACAACAAACCTCGGGAACTGGAGCCAGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
3UTR GCA 72 bp AGGCTCCCTGAGCCCTCGGCTTATAAATACAGGTCTTaGTTTGTGGGTGGGTGCCAGAGTCCTCATGTGGCT +
Preference number: 3 (lower is better)
Translates to: RLPEPSAYKYRS*FVGGCQSPHVA
Trigger: AGCCACATGAGGACTCTGGCACCCACCCACAAAGCAAGACCTGTATTTATAAGCCGAGGGCTCAGGGAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
3UTR GCA 72 bp TCCACCTTCCATGCTTCTGTGGGCTCTGGCTCAGCTTaGTCAGGTGGCTCGTCTTCCTTTTTCACTTCAGCC +
Preference number: 3 (lower is better)
Translates to: STFHASVGSGSA*SGGSSSFFTSA
Trigger: GGCTGAAGTGAAAAAGGAAGACGAGCCACCTGAGCAAGCTGAGCCAGAGCCCACAGAAGCATGGAAGGTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000643155.1
ENST00000648891.1
3UTR CCA 72 bp TTTCCGAGGTCTGTGGATCAGGGCTGGTGCCCTCCCTaGCATTCTGATACACTCACATCACTGGCTCTGAGA +
Preference number: 3 (lower is better)
Translates to: FPRSVDQGWCPP*HSDTLTSLALR
Trigger: TCTCAGAGCCAGTGATGTGAGTGTATCAGAATGCCAGGGAGGGCACCAGCCCTGATCCACAGACCTCGGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR-3UTR CAA 90 bp GGTAGCTCTTCCTACAGGCCATCTGGCCATCAGGCAGTGGGCATGCACTACATGCCCTGTCAGTGTCTGTaGGGGTTGGAAATAAATGGG +
Preference number: 3 (lower is better)
Translates to: GSSSYRPSGHQAVGMHYMPCQCL*GLEING
Trigger: CCCATTTATTTCCAACCCCAACAGACACTGACAGGG...CATGTAGTGCATGCCCACTGCCTGATGGCCAGATGGCCTGTAGGAAGAGCTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
3UTR-3UTR CAA 90 bp GCATCTTTCCGAGGTCTGTGGATCAGGGCTGGTGCCCTCCCTGGCATTCTGATACCCTGTCAGTGTCTGTaGGGGTTGGAAATAAATGGG +
Preference number: 3 (lower is better)
Translates to: ASFRGLWIRAGALPGILIPCQCL*GLEING
Trigger: CCCATTTATTTCCAACCCCAACAGACACTGACAGGG...TATCAGAATGCCAGGGAGGGCACCAGCCCTGATCCACAGACCTCGGAAAGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR-3UTR CAA 90 bp GCTCTGGCTCCAGTTCCCGAGGTTTGTTGTCTCCTCACCCCCAGCTGCCAAGCAGCAACTTCCATGTCTTaGACCCAAAGAAGCTCCAAA +
Preference number: 3 (lower is better)
Translates to: ALAPVPEVCCLLTPSCQAATSMS*TQRSSK
Trigger: TTTGGAGCTTCTTTGGGTCAAAGACATGGAAGTTGC...TGCTTGGCAGCTGGGGGTGAGGAGACAACAAACCTCGGGAACTGGAGCCAGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
3UTR-3UTR CAA 90 bp GGTAGCTCTTCCTACAGGCCATCTGGCCATCAGGCAGTGGGCATGCACTACATGTTGAGGCCAATGTGTTaGTGGGAAGCAGTTGGAAGG +
Preference number: 3 (lower is better)
Translates to: GSSSYRPSGHQAVGMHYMLRPMC*WEAVGR
Trigger: CCTTCCAACTGCTTCCCACAAACACATTGGCCTCAA...CATGTAGTGCATGCCCACTGCCTGATGGCCAGATGGCCTGTAGGAAGAGCTACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
3UTR-3UTR CAA 90 bp GGTAGCTCTTCCTACAGGCCATCTGGCCATCAGGCAGTGGGCATGCACTACATGTTTCCCTCCCTCCTGTaGTTCATGTCTCACATGGGT +
Preference number: 3 (lower is better)
Translates to: GSSSYRPSGHQAVGMHYMFPSLL*FMSHMG
Trigger: ACCCATGTGAGACATGAACAACAGGAGGGAGGGAAA...CATGTAGTGCATGCCCACTGCCTGATGGCCAGATGGCCTGTAGGAAGAGCTACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
3UTR-3UTR CAA 90 bp TGGGCCGAGGACTTCGGTCTGCCGAATCGACAGCTGCTGCTCCATCGAGGCTCCGCAAGAAATTTGCTTTaGGGAATGGTGTCTGTAGAT +
Preference number: 3 (lower is better)
Translates to: WAEDFGLPNRQLLLHRGSARNLL*GMVSVD
Trigger: ATCTACAGACACCATTCCCAAAAGCAAATTTCTTGC...GGAGCCTCGATGGAGCAGCAGCTGTCGATTCGGCAGACCGAAGTCCTCGGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
3UTR-3UTR CAA 90 bp CGAATCGACAGCTGCTGCTCCATCGAGGCTCCGGGACGCCCGTTTACTTGCTGTTCCAACAAAGAAACCTaGCAGTGCATGTTCCTGTGT +
Preference number: 3 (lower is better)
Translates to: RIDSCCSIEAPGRPFTCCSNKET*QCMFLC
Trigger: ACACAGGAACATGCACTGCAAGGTTTCTTTGTTGGA...ACAGCAAGTAAACGGGCGTCCCGGAGCCTCGATGGAGCAGCAGCTGTCGATTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643155.1
3UTR TCA 72 bp GAAGCAGCTTTAGACATTTCTCTTGCTCACTGCCCTTaGGCCCCAGTGACTGCTGCCCGATACCCACTGTCT +
Preference number: 3 (lower is better)
Translates to: EAALDISLAHCP*APVTAARYPLS
Trigger: AGACAGTGGGTATCGGGCAGCAGTCACTGGGGCTCAAGGGCAGTGAGCAAGAGAAATGTCTAAAGCTGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR TCA 72 bp GTGGTGGTGCTGCTTGGGGTCTCAGATGTGATAGTTTaGGCTGTCAGCAAGACTCCTGGGTCCAAGTCTCCA +
Preference number: 3 (lower is better)
Translates to: VVVLLGVSDVIV*AVSKTPGSKSP
Trigger: TGGAGACTTGGACCCAGGAGTCTTGCTGACAGCTCAAACTATCACATCTGAGACCCCAAGCAGCACCACCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643155.1
3UTR CCA 72 bp CTGAGCCCTCGGCTTATAAATACAGGTCTTGCTTTGTaGGTGGGTGCCAGAGTCCTCATGTGGCTTGGAGGA +
Preference number: 3 (lower is better)
Translates to: LSPRLINTGLAL*VGARVLMWLGG
Trigger: TCCTCCAAGCCACATGAGGACTCTGGCACCCACCCACAAAGCAAGACCTGTATTTATAAGCCGAGGGCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
3UTR-3UTR CAA 90 bp GGTAGCTCTTCCTACAGGCCATCTGGCCATCAGGCAGTGGGCATGCACTACATGCAGTGTCTGTTGGGGTaGGAAATAAATGGGCAGAGA +
Preference number: 3 (lower is better)
Translates to: GSSSYRPSGHQAVGMHYMQCLLG*EINGQR
Trigger: TCTCTGCCCATTTATTTCCAACCCCAACAGACACTG...CATGTAGTGCATGCCCACTGCCTGATGGCCAGATGGCCTGTAGGAAGAGCTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
3UTR-3UTR CAA 90 bp GGTAGCTCTTCCTACAGGCCATCTGGCCATCAGGCAGTGGGCATGCACTACATGTGTAAGCTGCATTTCTaGTCACCACTCCTGGCAACA +
Preference number: 3 (lower is better)
Translates to: GSSSYRPSGHQAVGMHYMCKLHF*SPLLAT
Trigger: TGTTGCCAGGAGTGGTGACAAGAAATGCAGCTTACA...CATGTAGTGCATGCCCACTGCCTGATGGCCAGATGGCCTGTAGGAAGAGCTACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
3UTR-3UTR CAA 90 bp CTGAGTAATGGCAGGTGCAGAAGTGGGCCGAGGACTTCGGTCTGCCGAATCGACCCTAGCGCAAGAAATTaGCTTTTGGGAATGGTGTCT +
Preference number: 3 (lower is better)
Translates to: LSNGRCRSGPRTSVCRIDPSARN*LLGMVS
Trigger: AGACACCATTCCCAAAAGCAAATTTCTTGCGCTAGG...GTCGATTCGGCAGACCGAAGTCCTCGGCCCACTTCTGCACCTGCCATTACTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
3UTR-3UTR CAA 90 bp AGCTGCTGCTCCATCGAGGCTCCGGGACGCCCGTTTACTTGCTGTACGCTCGAACCTCCATTTTCACAATaGGTCATGTGGACAAAGTAC +
Preference number: 3 (lower is better)
Translates to: SCCSIEAPGRPFTCCTLEPPFSQ*VMWTKY
Trigger: GTACTTTGTCCACATGACCAATTGTGAAAATGGAGG...TTCGAGCGTACAGCAAGTAAACGGGCGTCCCGGAGCCTCGATGGAGCAGCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642643.1
ENST00000648891.1
3UTR-3UTR CAA 90 bp AGGTGCAGAAGTGGGCCGAGGACTTCGGTCTGCCGAATCGACAGCTGCTGCTCCTCGTTTAAGCAAATCTaGTCCCTTAGCATGTTTCTC +
Preference number: 3 (lower is better)
Translates to: RCRSGPRTSVCRIDSCCSSFKQI*SLSMFL
Trigger: GAGAAACATGCTAAGGGACAAGATTTGCTTAAACGA...GGAGCAGCAGCTGTCGATTCGGCAGACCGAAGTCCTCGGCCCACTTCTGCACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643155.1
3UTR GCA 72 bp TTCTCTTGCTCACTGCCCTTGAGCCCCAGTGACTGCTaGCCGATACCCACTGTCTATTTTAGGAAGCTGGAA +
Preference number: 3 (lower is better)
Translates to: FSCSLPLSPSDC*PIPTVYFRKLE
Trigger: TTCCAGCTTCCTAAAATAGACAGTGGGTATCGGGCAGCAGTCACTGGGGCTCAAGGGCAGTGAGCAAGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR GCA 72 bp CATTTCTCTTGCTCACTGCCCTTGAGCCCCAGTGACTaGTGCCCGATACCCACTGTCTATTTTAGGAAGCTG +
Preference number: 3 (lower is better)
Translates to: HFSCSLPLSPSD*CPIPTVYFRKL
Trigger: CAGCTTCCTAAAATAGACAGTGGGTATCGGGCAGCAGTCACTGGGGCTCAAGGGCAGTGAGCAAGAGAAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR CCA 72 bp TCGTTTGATGTAAGCTGCATTTCTTGTCACCACTCCTaGCAACACGACCAGGCTTGGGCACTACCCCAAAGC +
Preference number: 3 (lower is better)
Translates to: SFDVSCISCHHS*QHDQAWALPQS
Trigger: GCTTTGGGGTAGTGCCCAAGCCTGGTCGTGTTGCCAGGAGTGGTGACAAGAAATGCAGCTTACATCAAACGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
3UTR-3UTR CAA 90 bp TCCAAAGGGGATAAGACTAGGGAGAGACGCGGAAGTCCCACTAAGCTGGCTTTGCCCTGTCAGTGTCTGTaGGGGTTGGAAATAAATGGG +
Preference number: 3 (lower is better)
Translates to: SKGDKTRERRGSPTKLALPCQCL*GLEING
Trigger: CCCATTTATTTCCAACCCCAACAGACACTGACAGGG...CAAAGCCAGCTTAGTGGGACTTCCGCGTCTCTCCCTAGTCTTATCCCCTTTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR-3UTR CAA 90 bp CCCTTGTCATGTGGTGTCTTGTGGGGAGAACGGCTCCTAAAAGTCAATTCCTTGCCCACTAAGCTGGCTTaGGCTTCCAACACAGCTGAC +
Preference number: 3 (lower is better)
Translates to: PLSCGVLWGERLLKVNSLPTKLA*ASNTAD
Trigger: GTCAGCTGTGTTGGAAGCCAAAGCCAGCTTAGTGGG...CAAGGAATTGACTTTTAGGAGCCGTTCTCCCCACAAGACACCACATGACAAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR-3UTR CAA 90 bp GTTGGGAGAAGCAGCTTTAGACATTTCTCTTGCTCACTGCCCTTGAGCCCCAGTTTGTCATGTGGTGTCTaGTGGGGAGAACGGCTCCTA +
Preference number: 3 (lower is better)
Translates to: VGRSSFRHFSCSLPLSPSLSCGV*WGERLL
Trigger: TAGGAGCCGTTCTCCCCACAAGACACCACATGACAA...ACTGGGGCTCAAGGGCAGTGAGCAAGAGAAATGTCTAAAGCTGCTTCTCCCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR-3UTR CAA 90 bp CCAACACAGCTGACAAGAGTCCTTGGAGGATTTCCCGAAGAATTCCATGGACCCTTTTGCTGGTTTCTCTaGGATGGGAGAAGGGCAGAG +
Preference number: 3 (lower is better)
Translates to: PTQLTRVLGGFPEEFHGPFCWFL*DGRRAE
Trigger: CTCTGCCCTTCTCCCATCCAAGAGAAACCAGCAAAA...GGGTCCATGGAATTCTTCGGGAAATCCTCCAAGGACTCTTGTCAGCTGTGTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR-3UTR CAA 90 bp TTTGAGCTGTCAGCAAGACTCCTGGGTCCAAGTCTCCACTGTTGTCGTCAGTCTTTTTGCTGGTTTCTCTaGGATGGGAGAAGGGCAGAG +
Preference number: 3 (lower is better)
Translates to: FELSARLLGPSLHCCRQSFCWFL*DGRRAE
Trigger: CTCTGCCCTTCTCCCATCCAAGAGAAACCAGCAAAA...AGACTGACGACAACAGTGGAGACTTGGACCCAGGAGTCTTGCTGACAGCTCAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643155.1
3UTR-3UTR CAA 90 bp GAAGCTGGAACTGGGATTCTAAGGAGCCTTGAGGCCAATGTGTTTGTGGGAAGCCCCTGTCAGTGTCTGTaGGGGTTGGAAATAAATGGG +
Preference number: 3 (lower is better)
Translates to: EAGTGILRSLEANVFVGSPCQCL*GLEING
Trigger: CCCATTTATTTCCAACCCCAACAGACACTGACAGGG...GCTTCCCACAAACACATTGGCCTCAAGGCTCCTTAGAATCCCAGTTCCAGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR-3UTR CAA 90 bp GGGCTCTTTCCCTCCCTCCTGTTGTTCATGTCTCACATGGGTACCAAAAGAAAACCCACTAAGCTGGCTTaGGCTTCCAACACAGCTGAC +
Preference number: 3 (lower is better)
Translates to: GLFPSLLLFMSHMGTKRKPTKLA*ASNTAD
Trigger: GTCAGCTGTGTTGGAAGCCAAAGCCAGCTTAGTGGG...TTTTCTTTTGGTACCCATGTGAGACATGAACAACAGGAGGGAGGGAAAGAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR-3UTR CAA 90 bp GCCCAGGCTGGTCTTAAACTACTGGACTCAAGTGATCTGCCTGTCTTGGCCTCCGGCTTAGGGGCCTCCTaGGTTTACTATATAATTGTG +
Preference number: 3 (lower is better)
Translates to: AQAGLKLLDSSDLPVLASGLGAS*VYYIIV
Trigger: CACAATTATATAGTAAACCAAGGAGGCCCCTAAGCC...GGAGGCCAAGACAGGCAGATCACTTGAGTCCAGTAGTTTAAGACCAGCCTGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000645184.1
ENST00000648181.1
3UTR-3UTR CAA 90 bp CAGAGACAGTTCTCAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTCCTATTTGCCTGGTCTGAGCTaGAGTCCGGCCACTGTATCG +
Preference number: 3 (lower is better)
Translates to: QRQFSEANHLLVAPNSSYLPGLS*SPATVS
Trigger: CGATACAGTGGCCGGACTCAAGCTCAGACCAGGCAA...ATAGGAGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTGAGAACTGTCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642643.1
ENST00000648891.1
3UTR-3UTR CAA 90 bp CTGACCCTGAGTAATGGCAGGTGCAGAAGTGGGCCGAGGACTTCGGTCTGCCGATCTTTTACTTCTATTTaGGAGCACTCTTCAAGTCCT +
Preference number: 3 (lower is better)
Translates to: LTLSNGRCRSGPRTSVCRSFTSI*EHSSSP
Trigger: AGGACTTGAAGAGTGCTCCAAAATAGAAGTAAAAGA...TCGGCAGACCGAAGTCCTCGGCCCACTTCTGCACCTGCCATTACTCAGGGTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643155.1
3UTR TCA 72 bp GGCCATCAGGCAGTGGGCATGCACTACATGTTCGTTTaGTGTAAGCTGCATTTCTTGTCACCACTCCTGGCA +
Preference number: 3 (lower is better)
Translates to: GHQAVGMHYMFV*CKLHFLSPLLA
Trigger: TGCCAGGAGTGGTGACAAGAAATGCAGCTTACATCAAACGAACATGTAGTGCATGCCCACTGCCTGATGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
3UTR TCA 72 bp GAAACGTTTAGGCCCCCGATGAACGGTCCTGTGCTGTaGAAGCTGCCACACTGTTCTAGATCACACGGAATA +
Preference number: 3 (lower is better)
Translates to: ETFRPPMNGPVL*KLPHCSRSHGI
Trigger: TATTCCGTGTGATCTAGAACAGTGTGGCAGCTTTCACAGCACAGGACCGTTCATCGGGGGCCTAAACGTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
3UTR CCA 72 bp CTGGCTTTGGCTTCCAACACAGCTGACAAGAGTCCTTaGAGGATTTCCCGAAGAATTCCATGGACCCTGTCA +
Preference number: 3 (lower is better)
Translates to: LALASNTADKSP*RISRRIPWTLS
Trigger: TGACAGGGTCCATGGAATTCTTCGGGAAATCCTCCAAGGACTCTTGTCAGCTGTGTTGGAAGCCAAAGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR CCA 72 bp ATAAGACTAGGGAGAGACGCGGAAGTCCCACTAAGCTaGCTTTGGCTTCCAACACAGCTGACAAGAGTCCTT +
Preference number: 3 (lower is better)
Translates to: IRLGRDAEVPLS*LWLPTQLTRVL
Trigger: AAGGACTCTTGTCAGCTGTGTTGGAAGCCAAAGCCAGCTTAGTGGGACTTCCGCGTCTCTCCCTAGTCTTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR-3UTR CAA 90 bp GTTGGGAGAAGCAGCTTTAGACATTTCTCTTGCTCACTGCCCTTGAGCCCCAGTCAGTGTCTGTTGGGGTaGGAAATAAATGGGCAGAGA +
Preference number: 3 (lower is better)
Translates to: VGRSSFRHFSCSLPLSPSQCLLG*EINGQR
Trigger: TCTCTGCCCATTTATTTCCAACCCCAACAGACACTG...ACTGGGGCTCAAGGGCAGTGAGCAAGAGAAATGTCTAAAGCTGCTTCTCCCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR-3UTR CAA 90 bp CCAACACAGCTGACAAGAGTCCTTGGAGGATTTCCCGAAGAATTCCATGGACCCCAGTGTCTGTTGGGGTaGGAAATAAATGGGCAGAGA +
Preference number: 3 (lower is better)
Translates to: PTQLTRVLGGFPEEFHGPQCLLG*EINGQR
Trigger: TCTCTGCCCATTTATTTCCAACCCCAACAGACACTG...GGGTCCATGGAATTCTTCGGGAAATCCTCCAAGGACTCTTGTCAGCTGTGTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR-3UTR CAA 90 bp CTCTTTCCCTCCCTCCTGTTGTTCATGTCTCACATGGGTACCAAAAGAAAAATGCAGGCAGTGGAGACTTaGGACGGTGTTGGGAGAAGC +
Preference number: 3 (lower is better)
Translates to: LFPSLLLFMSHMGTKRKMQAVET*DGVGRS
Trigger: GCTTCTCCCAACACCGTCCAAAGTCTCCACTGCCTG...CATTTTTCTTTTGGTACCCATGTGAGACATGAACAACAGGAGGGAGGGAAAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR-3UTR CAA 90 bp CCGTGGTTCTGGTACAGACTCCATGAAGTTCTTTTTCAGCTCACTGATGCTGGCGTGTTTGGTCACCATTaGAGGTGGGTACTGTCACCT +
Preference number: 3 (lower is better)
Translates to: PWFWYRLHEVLFQLTDAGVFGHH*RWVLSP
Trigger: AGGTGACAGTACCCACCTCAAATGGTGACCAAACAC...GCCAGCATCAGTGAGCTGAAAAAGAACTTCATGGAGTCTGTACCAGAACCACGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000643155.1
ENST00000648891.1
3UTR GCA 72 bp CAGTGGGCATGCACTACATGTTCGTTTGATGTAAGCTaGATTTCTTGTCACCACTCCTGGCAACACGACCAG +
Preference number: 3 (lower is better)
Translates to: QWACTTCSFDVS*ISCHHSWQHDQ
Trigger: CTGGTCGTGTTGCCAGGAGTGGTGACAAGAAATGCAGCTTACATCAAACGAACATGTAGTGCATGCCCACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
3UTR CCA 72 bp AGATTTGTAGAAACAACCAGCCTGGGGCTGAGATCCTaGGCAGAAATTTCCCGTGAGCATCAAAAGGCGTCA +
Preference number: 3 (lower is better)
Translates to: RFVETTSLGLRS*AEISREHQKAS
Trigger: TGACGCCTTTTGATGCTCACGGGAAATTTCTGCCCAGGATCTCAGCCCCAGGCTGGTTGTTTCTACAAATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
3UTR-3UTR CAA 90 bp GGGCTCTTTCCCTCCCTCCTGTTGTTCATGTCTCACATGGGTACCAAAAGAAAAAGACTTTGGACGGTGTaGGGAGAAGCAGCTTTAGAC +
Preference number: 3 (lower is better)
Translates to: GLFPSLLLFMSHMGTKRKRLWTV*GEAALD
Trigger: GTCTAAAGCTGCTTCTCCCAACACCGTCCAAAGTCT...TTTTCTTTTGGTACCCATGTGAGACATGAACAACAGGAGGGAGGGAAAGAGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR-3UTR CAA 90 bp AAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAATACATACTCCAGGCAGGAAAAAGTaGTCTGTCCCTGTACAGCTC +
Preference number: 3 (lower is better)
Translates to: KAGFGQSIATPLYPTIHTPGRKK*SVPVQL
Trigger: GAGCTGTACAGGGACAGACAACTTTTTCCTGCCTGG...AGTATGTATTGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
3UTR-3UTR CAA 90 bp GGCTCAGCTTGCTCAGGTGGCTCGTCTTCCTTTTTCACTTCAGCCTTCACTGTTTTCTCCTGTGGGGATTaGCCCATTGATGTTAAGAGT +
Preference number: 3 (lower is better)
Translates to: GSACSGGSSSFFTSAFTVFSCGD*PIDVKS
Trigger: ACTCTTAACATCAATGGGCAAATCCCCACAGGAGAA...AACAGTGAAGGCTGAAGTGAAAAAGGAAGACGAGCCACCTGAGCAAGCTGAGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
3UTR-3UTR CAA 90 bp TCTTGGATGGGAGAAGGGCAGAGTTGGGGTAGGTTAGTTCCTGAGCTCACTCATCTAATAATGCTAAGGTaGCAAAGGAACAGGGCAGAC +
Preference number: 3 (lower is better)
Translates to: SWMGEGQSWGRLVPELTHLIMLR*QRNRAD
Trigger: GTCTGCCCTGTTCCTTTGCAACCTTAGCATTATTAG...ATGAGTGAGCTCAGGAACTAACCTACCCCAACTCTGCCCTTCTCCCATCCAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643155.1
3UTR TCA 72 bp CTGTGTTCCAGACTTTTAAGGATAGGTAGAGTAGTCTaGGAATTTCAGTCCTGGCTGGAGGCTAAGGGGCAC +
Preference number: 3 (lower is better)
Translates to: LCSRLLRIGRVV*EFQSWLEAKGH
Trigger: GTGCCCCTTAGCCTCCAGCCAGGACTGAAATTCTCAGACTACTCTACCTATCCTTAAAAGTCTGGAACACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
3UTR-3UTR CAA 90 bp CTCTGGCTCAGCTTGCTCAGGTGGCTCGTCTTCCTTTTTCACTTCAGCCTTCACAGCTTCTTTATCATTTaGCTGGTTTCTCTTGGATGG +
Preference number: 3 (lower is better)
Translates to: LWLSLLRWLVFLFHFSLHSFFII*LVSLGW
Trigger: CCATCCAAGAGAAACCAGCAAAATGATAAAGAAGCT...GTGAAGGCTGAAGTGAAAAAGGAAGACGAGCCACCTGAGCAAGCTGAGCCAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643155.1
3UTR-3UTR CAA 90 bp CCCTTGTCATGTGGTGTCTTGTGGGGAGAACGGCTCCTAAAAGTCAATTCCTTGGCAACTTCCATGTCTTaGACCCAAAGAAGCTCCAAA +
Preference number: 3 (lower is better)
Translates to: PLSCGVLWGERLLKVNSLATSMS*TQRSSK
Trigger: TTTGGAGCTTCTTTGGGTCAAAGACATGGAAGTTGC...CAAGGAATTGACTTTTAGGAGCCGTTCTCCCCACAAGACACCACATGACAAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR-3UTR CAA 90 bp CTCTTTCCCTCCCTCCTGTTGTTCATGTCTCACATGGGTACCAAAAGAAAAATGTTGTCATGTGGTGTCTaGTGGGGAGAACGGCTCCTA +
Preference number: 3 (lower is better)
Translates to: LFPSLLLFMSHMGTKRKMLSCGV*WGERLL
Trigger: TAGGAGCCGTTCTCCCCACAAGACACCACATGACAA...CATTTTTCTTTTGGTACCCATGTGAGACATGAACAACAGGAGGGAGGGAAAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR-3UTR CAA 90 bp AAAAATGCACACACCCGAAATGAGTTCAAACCAGCCGAAACAAAACTCAGGCAGTGGGGCTTATACCCCTaGTCATGTGGTGTCTTGTGG +
Preference number: 3 (lower is better)
Translates to: KNAHTRNEFKPAETKLRQWGLYP*SCGVLW
Trigger: CCACAAGACACCACATGACAAGGGGTATAAGCCCCA...CTGCCTGAGTTTTGTTTCGGCTGGTTTGAACTCATTTCGGGTGTGTGCATTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR-3UTR CAA 90 bp TCTATACACCAGGCAGGAAAAAGTTGTCTGTCCCTGTACAGCTCAGAAATACTCGCTTTGGGCAGTCCATaGCTACTCCTTTGTACCCCA +
Preference number: 3 (lower is better)
Translates to: SIHQAGKSCLSLYSSEILALGSP*LLLCTP
Trigger: TGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGC...GAGTATTTCTGAGCTGTACAGGGACAGACAACTTTTTCCTGCCTGGTGTATAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
3UTR-3UTR CAA 90 bp CAGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAGAAGTTCAATGCCAGGCAGGAAAAAGTaGTCTGTCCCTGTACAGCTC +
Preference number: 3 (lower is better)
Translates to: QRASYSNNTVEAKDRSSMPGRKK*SVPVQL
Trigger: GAGCTGTACAGGGACAGACAACTTTTTCCTGCCTGG...CATTGAACTTCTGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
3UTR-3UTR CAA 90 bp TCTATACACCAGGCAGGAAAAAGTTGTCTGTCCCTGTACAGCTCAGAAATACTCCCAGGCAGGAAAAAGTaGTCTGTCCCTGTACAGCTC +
Preference number: 3 (lower is better)
Translates to: SIHQAGKSCLSLYSSEILPGRKK*SVPVQL
Trigger: GAGCTGTACAGGGACAGACAACTTTTTCCTGCCTGG...GAGTATTTCTGAGCTGTACAGGGACAGACAACTTTTTCCTGCCTGGTGTATAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
3UTR-3UTR CAA 90 bp CCGTGGTTCTGGTACAGACTCCATGAAGTTCTTTTTCAGCTCACTGATGCTGGCCCTAGCGCAAGAAATTaGCTTTTGGGAATGGTGTCT +
Preference number: 3 (lower is better)
Translates to: PWFWYRLHEVLFQLTDAGPSARN*LLGMVS
Trigger: AGACACCATTCCCAAAAGCAAATTTCTTGCGCTAGG...GCCAGCATCAGTGAGCTGAAAAAGAACTTCATGGAGTCTGTACCAGAACCACGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
3UTR-3UTR CAA 90 bp CTCTTTCCCTCCCTCCTGTTGTTCATGTCTCACATGGGTACCAAAAGAAAAATGTTTTGCTGGTTTCTCTaGGATGGGAGAAGGGCAGAG +
Preference number: 3 (lower is better)
Translates to: LFPSLLLFMSHMGTKRKMFCWFL*DGRRAE
Trigger: CTCTGCCCTTCTCCCATCCAAGAGAAACCAGCAAAA...CATTTTTCTTTTGGTACCCATGTGAGACATGAACAACAGGAGGGAGGGAAAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR-3UTR CAA 90 bp AAAAATGCACACACCCGAAATGAGTTCAAACCAGCCGAAACAAAACTCAGGCAGTTTTGCTGGTTTCTCTaGGATGGGAGAAGGGCAGAG +
Preference number: 3 (lower is better)
Translates to: KNAHTRNEFKPAETKLRQFCWFL*DGRRAE
Trigger: CTCTGCCCTTCTCCCATCCAAGAGAAACCAGCAAAA...CTGCCTGAGTTTTGTTTCGGCTGGTTTGAACTCATTTCGGGTGTGTGCATTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR-3UTR CAA 90 bp CAGCTGACAAGAGTCCTTGGAGGATTTCCCGAAGAATTCCATGGACCCTGTCAGAGCTTCTTTATCATTTaGCTGGTTTCTCTTGGATGG +
Preference number: 3 (lower is better)
Translates to: QLTRVLGGFPEEFHGPCQSFFII*LVSLGW
Trigger: CCATCCAAGAGAAACCAGCAAAATGATAAAGAAGCT...CTGACAGGGTCCATGGAATTCTTCGGGAAATCCTCCAAGGACTCTTGTCAGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR-3UTR CAA 90 bp CTCTTTCCCTCCCTCCTGTTGTTCATGTCTCACATGGGTACCAAAAGAAAAATGCCCTGTCAGTGTCTGTaGGGGTTGGAAATAAATGGG +
Preference number: 3 (lower is better)
Translates to: LFPSLLLFMSHMGTKRKMPCQCL*GLEING
Trigger: CCCATTTATTTCCAACCCCAACAGACACTGACAGGG...CATTTTTCTTTTGGTACCCATGTGAGACATGAACAACAGGAGGGAGGGAAAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR-3UTR CAA 90 bp CCCTTGTCATGTGGTGTCTTGTGGGGAGAACGGCTCCTAAAAGTCAATTCCTTGGTTCCATTAGAGCTTTaGGCCCAAAGTGCCTATTTT +
Preference number: 3 (lower is better)
Translates to: PLSCGVLWGERLLKVNSLVPLEL*AQSAYF
Trigger: AAAATAGGCACTTTGGGCCAAAAGCTCTAATGGAAC...CAAGGAATTGACTTTTAGGAGCCGTTCTCCCCACAAGACACCACATGACAAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR-3UTR CAA 90 bp TTAAACTTCAATGCAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTGCTTTGGGCAGTCCATaGCTACTCCTTTGTACCCCA +
Preference number: 3 (lower is better)
Translates to: LNFNAEKLALGSPLLLLCALGSP*LLLCTP
Trigger: TGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGC...ACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTGCATTGAAGTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
3UTR-3UTR CAA 90 bp AAAGTAGAGGTGGCACTTTTTGAGAGACTTGTGATCCTCAGGGATTGGAATAGAGCTTTGGGCAGTCCATaGCTACTCCTTTGTACCCCA +
Preference number: 3 (lower is better)
Translates to: KVEVALFERLVILRDWNRALGSP*LLLCTP
Trigger: TGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGC...TCTATTCCAATCCCTGAGGATCACAAGTCTCTCAAAAAGTGCCACCTCTACTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
3UTR-3UTR CAA 90 bp AGAAGTCAACATGCAAACAGAGGACACATACTTGTCACAAGTGAACTTGAGGTCGCTTTGGGCAGTCCATaGCTACTCCTTTGTACCCCA +
Preference number: 3 (lower is better)
Translates to: RSQHANRGHILVTSELEVALGSP*LLLCTP
Trigger: TGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGC...GACCTCAAGTTCACTTGTGACAAGTATGTGTCCTCTGTTTGCATGTTGACTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
3UTR-3UTR CAA 90 bp GAAGTCAACATGCAAACAGAGGACACATACTTGTCACAAGTGAACTTGAGGTCAGCAGAAAAGCTGGCTTaGGGCAGTCCATTGCTACTC +
Preference number: 3 (lower is better)
Translates to: EVNMQTEDTYLSQVNLRSAEKLA*GSPLLL
Trigger: GAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTGC...TGACCTCAAGTTCACTTGTGACAAGTATGTGTCCTCTGTTTGCATGTTGACTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
3UTR-3UTR CAA 90 bp TTAAACTTCAATGCAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTGCAGAAAAGCTGGCTTaGGGCAGTCCATTGCTACTC +
Preference number: 3 (lower is better)
Translates to: LNFNAEKLALGSPLLLLCAEKLA*GSPLLL
Trigger: GAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTGC...ACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTGCATTGAAGTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
3UTR-3UTR CAA 90 bp AGAAGTCAACATGCAAACAGAGGACACATACTTGTCACAAGTGAACTTGAGGTCGCAGAAAAGCTGGCTTaGGGCAGTCCATTGCTACTC +
Preference number: 3 (lower is better)
Translates to: RSQHANRGHILVTSELEVAEKLA*GSPLLL
Trigger: GAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTGC...GACCTCAAGTTCACTTGTGACAAGTATGTGTCCTCTGTTTGCATGTTGACTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
3UTR-3UTR CAA 90 bp ACTATCAAGATCAGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAGCAGAAAAGCTGGCTTaGGGCAGTCCATTGCTACTC +
Preference number: 3 (lower is better)
Translates to: TIKIRGHHTAITQLKPRTAEKLA*GSPLLL
Trigger: GAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTGC...TGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCTGATCTTGATAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
3UTR-3UTR CAA 90 bp GAAGTCAACATGCAAACAGAGGACACATACTTGTCACAAGTGAACTTGAGGTCACCAGGCAGGAAAAAGTaGTCTGTCCCTGTACAGCTC +
Preference number: 3 (lower is better)
Translates to: EVNMQTEDTYLSQVNLRSPGRKK*SVPVQL
Trigger: GAGCTGTACAGGGACAGACAACTTTTTCCTGCCTGG...TGACCTCAAGTTCACTTGTGACAAGTATGTGTCCTCTGTTTGCATGTTGACTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
3UTR-3UTR CAA 90 bp AGAAGTCAACATGCAAACAGAGGACACATACTTGTCACAAGTGAACTTGAGGTCCCAGGCAGGAAAAAGTaGTCTGTCCCTGTACAGCTC +
Preference number: 3 (lower is better)
Translates to: RSQHANRGHILVTSELEVPGRKK*SVPVQL
Trigger: GAGCTGTACAGGGACAGACAACTTTTTCCTGCCTGG...GACCTCAAGTTCACTTGTGACAAGTATGTGTCCTCTGTTTGCATGTTGACTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
3UTR-3UTR CAA 90 bp CTCCTTTGCCTCCTTGATGGCTTGTACAAGGACCTGATCATGGTCAATATCAGCCCTAGCGCAAGAAATTaGCTTTTGGGAATGGTGTCT +
Preference number: 3 (lower is better)
Translates to: LLCLLDGLYKDLIMVNISPSARN*LLGMVS
Trigger: AGACACCATTCCCAAAAGCAAATTTCTTGCGCTAGG...GCTGATATTGACCATGATCAGGTCCTTGTACAAGCCATCAAGGAGGCAAAGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643155.1
3UTR-3UTR CAA 90 bp GCTCAGCTTGCTCAGGTGGCTCGTCTTCCTTTTTCACTTCAGCCTTCACTGTTTCCACTGTATCGAAATTaGGATCCTAGCGCAAGAAAT +
Preference number: 3 (lower is better)
Translates to: AQLAQVARLPFSLQPSLFPLYRN*DPSARN
Trigger: ATTTCTTGCGCTAGGATCCAAATTTCGATACAGTGG...AAACAGTGAAGGCTGAAGTGAAAAAGGAAGACGAGCCACCTGAGCAAGCTGAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
3UTR TCA 72 bp ATTTTAGGAAGCTGGAACTGGGATTCTAAGGAGCCTTaGGGCCAATGTGTTTGTGGGAAGCAGTTGGAAGGT +
Preference number: 3 (lower is better)
Translates to: ILGSWNWDSKEP*GQCVCGKQLEG
Trigger: ACCTTCCAACTGCTTCCCACAAACACATTGGCCTCAAGGCTCCTTAGAATCCCAGTTCCAGCTTCCTAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR CCA 72 bp GACAAGAGTCCTTGGAGGATTTCCCGAAGAATTCCATaGACCCTGTCAGTGTCTGTTGGGGTTGGAAATAAA +
Preference number: 3 (lower is better)
Translates to: DKSPWRISRRIP*TLSVSVGVGNK
Trigger: TTTATTTCCAACCCCAACAGACACTGACAGGGTCCATGGAATTCTTCGGGAAATCCTCCAAGGACTCTTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR CCA 72 bp TCTGATACACTCACATCACTGGCTCTGAGAAAGGGCTaGTTCATGAAGTTTCTGCCATCATCCAAAGGGGAT +
Preference number: 3 (lower is better)
Translates to: SDTLTSLALRKG*FMKFLPSSKGD
Trigger: ATCCCCTTTGGATGATGGCAGAAACTTCATGAACCAGCCCTTTCTCAGAGCCAGTGATGTGAGTGTATCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR CCA 72 bp AAACCAGCCGAAACAAAACTCAGGCAGTGGAGACTTTaGACGGTGTTGGGAGAAGCAGCTTTAGACATTTCT +
Preference number: 3 (lower is better)
Translates to: KPAETKLRQWRL*TVLGEAALDIS
Trigger: AGAAATGTCTAAAGCTGCTTCTCCCAACACCGTCCAAAGTCTCCACTGCCTGAGTTTTGTTTCGGCTGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR CCA 72 bp AATGAGTTCAAACCAGCCGAAACAAAACTCAGGCAGTaGAGACTTTGGACGGTGTTGGGAGAAGCAGCTTTA +
Preference number: 3 (lower is better)
Translates to: NEFKPAETKLRQ*RLWTVLGEAAL
Trigger: TAAAGCTGCTTCTCCCAACACCGTCCAAAGTCTCCACTGCCTGAGTTTTGTTTCGGCTGGTTTGAACTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR CCA 72 bp TGCAGAGACAGTTCTCAGAGGCTAATCATCTACTGGTaGCTCCAAATAGCTCCTATAATTGCACTGGGTAGC +
Preference number: 3 (lower is better)
Translates to: CRDSSQRLIIYW*LQIAPIIALGS
Trigger: GCTACCCAGTGCAATTATAGGAGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTGAGAACTGTCTCTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648181.1
ENST00000648891.1
3UTR CCA 72 bp AGCTGCAGAGACAGTTCTCAGAGGCTAATCATCTACTaGTGGCTCCAAATAGCTCCTATAATTGCACTGGGT +
Preference number: 3 (lower is better)
Translates to: SCRDSSQRLIIY*WLQIAPIIALG
Trigger: ACCCAGTGCAATTATAGGAGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTGAGAACTGTCTCTGCAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648181.1
ENST00000648891.1
3UTR CCA 72 bp TGGTCTGAGCTTGAGTCCGGCCACTGTATCGAAATTTaGATCCTAGCGCAAGAAATTTGCTTTTGGGAATGG +
Preference number: 3 (lower is better)
Translates to: WSELESGHCIEI*ILAQEICFWEW
Trigger: CCATTCCCAAAAGCAAATTTCTTGCGCTAGGATCCAAATTTCGATACAGTGGCCGGACTCAAGCTCAGACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
3UTR-3UTR CAA 90 bp GCCACATTCCTTGTCATTTGGGATGAAAGAAAGGCCCAGGATCAGACAGAAGTAGCAACTTCCATGTCTTaGACCCAAAGAAGCTCCAAA +
Preference number: 3 (lower is better)
Translates to: ATFLVIWDERKAQDQTEVATSMS*TQRSSK
Trigger: TTTGGAGCTTCTTTGGGTCAAAGACATGGAAGTTGC...TACTTCTGTCTGATCCTGGGCCTTTCTTTCATCCCAAATGACAAGGAATGTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR-3UTR CAA 90 bp CAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAATACAACAGCAATAACACAGTaGAAGCCAAGGACAGAAGTT +
Preference number: 3 (lower is better)
Translates to: QKSWLWAVHCYSFVPHNTTAITQ*KPRTEV
Trigger: AACTTCTGTCCTTGGCTTCAACTGTGTTATTGCTGT...TGTATTGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
3UTR-3UTR CAA 90 bp AAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAATACATACTACAGAGGACACATACTaGTCACAAGTGAACTTGAGG +
Preference number: 3 (lower is better)
Translates to: KAGFGQSIATPLYPTIHTTEDTY*SQVNLR
Trigger: CCTCAAGTTCACTTGTGACAAGTATGTGTCCTCTGT...AGTATGTATTGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
3UTR-3UTR CAA 90 bp CTCCTTTGCCTCCTTGATGGCTTGTACAAGGACCTGATCATGGTCAATATCAGCTCACTTTTCACAGCATaGGCATTATCTGAGATGGTG +
Preference number: 3 (lower is better)
Translates to: LLCLLDGLYKDLIMVNISSLFTA*ALSEMV
Trigger: CACCATCTCAGATAATGCCAATGCTGTGAAAAGTGA...GCTGATATTGACCATGATCAGGTCCTTGTACAAGCCATCAAGGAGGCAAAGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643155.1
3UTR TCA 72 bp ATTTGCCCATTGATGTTAAGAGTTCGGAAGGGTGAGTaGGTGGATAAGCGTTTATCCCATTCACTAGGCCGT +
Preference number: 3 (lower is better)
Translates to: ICPLMLRVRKGE*VDKRLSHSLGR
Trigger: ACGGCCTAGTGAATGGGATAAACGCTTATCCACTCACTCACCCTTCCGAACTCTTAACATCAATGGGCAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
3UTR-3UTR CAA 90 bp AAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAATACATACTACAGCAATAACACAGTaGAAGCCAAGGACAGAAGTT +
Preference number: 3 (lower is better)
Translates to: KAGFGQSIATPLYPTIHTTAITQ*KPRTEV
Trigger: AACTTCTGTCCTTGGCTTCAACTGTGTTATTGCTGT...AGTATGTATTGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
3UTR-3UTR CAA 90 bp AAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAATACATACTTCCATTGCTACTCCTTaGTACCCCACAATACATACT +
Preference number: 3 (lower is better)
Translates to: KAGFGQSIATPLYPTIHTSIATP*YPTIHT
Trigger: AGTATGTATTGTGGGGTACAAAGGAGTAGCAATGGA...AGTATGTATTGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
3UTR-3UTR CAA 90 bp GGACACATACTTGTCACAAGTGAACTTGAGGTCACAAAGCCATTGATTAAAAACCCAGGCAGGAAAAAGTaGTCTGTCCCTGTACAGCTC +
Preference number: 3 (lower is better)
Translates to: GHILVTSELEVTKPLIKNPGRKK*SVPVQL
Trigger: GAGCTGTACAGGGACAGACAACTTTTTCCTGCCTGG...GTTTTTAATCAATGGCTTTGTGACCTCAAGTTCACTTGTGACAAGTATGTGTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
3UTR-3UTR CAA 90 bp CAATTGGTCATGTGGACAAAGTACTCACTCCTTCTCCTGTGGGGATTTGCCCATGCAAGAAATTTGCTTTaGGGAATGGTGTCTGTAGAT +
Preference number: 3 (lower is better)
Translates to: QLVMWTKYSLLLLWGFAHARNLL*GMVSVD
Trigger: ATCTACAGACACCATTCCCAAAAGCAAATTTCTTGC...ATGGGCAAATCCCCACAGGAGAAGGAGTGAGTACTTTGTCCACATGACCAATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642643.1
ENST00000648891.1
3UTR CCA 72 bp TTTAAAATCACTAACATAATCCACGCCATGGAGTTCTaGGTCGTAGTCTCCCAGTTCAGACTGGATGGTGTA +
Preference number: 3 (lower is better)
Translates to: FKITNIIHAMEF*VVVSQFRLDGV
Trigger: TACACCATCCAGTCTGAACTGGGAGACTACGACCCAGAACTCCATGGCGTGGATTATGTTAGTGATTTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643155.1
3UTR-3UTR CAA 90 bp GGCAGGAAAAAGTTGTCTGTCCCTGTACAGCTCAGAAATACTCATAAAAAGGCCAGAAGTTCAATGGTCTaGACATTTCAGATGAGCACC +
Preference number: 3 (lower is better)
Translates to: GRKKLSVPVQLRNTHKKARSSMV*TFQMST
Trigger: GGTGCTCATCTGAAATGTCAAGACCATTGAACTTCT...GGCCTTTTTATGAGTATTTCTGAGCTGTACAGGGACAGACAACTTTTTCCTGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
3UTR-3UTR CAA 90 bp TCTATACACCAGGCAGGAAAAAGTTGTCTGTCCCTGTACAGCTCAGAAATACTCAGAAGTTCAATGGTCTaGACATTTCAGATGAGCACC +
Preference number: 3 (lower is better)
Translates to: SIHQAGKSCLSLYSSEILRSSMV*TFQMST
Trigger: GGTGCTCATCTGAAATGTCAAGACCATTGAACTTCT...GAGTATTTCTGAGCTGTACAGGGACAGACAACTTTTTCCTGCCTGGTGTATAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
3UTR-3UTR CAA 90 bp CAGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAGAAGTTCAATGTCCATTGCTACTCCTTaGTACCCCACAATACATACT +
Preference number: 3 (lower is better)
Translates to: QRASYSNNTVEAKDRSSMSIATP*YPTIHT
Trigger: AGTATGTATTGTGGGGTACAAAGGAGTAGCAATGGA...CATTGAACTTCTGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
3UTR-3UTR CAA 90 bp ATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAGTCAAGCAGAAAAGCTGGCTTaGGGCAGTCCATTGCTACTC +
Preference number: 3 (lower is better)
Translates to: IEKFLFPLQFLYSAIHSQAEKLA*GSPLLL
Trigger: GAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTGC...TTGACTATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
3UTR-3UTR CAA 90 bp GGCAGGAAAAAGTTGTCTGTCCCTGTACAGCTCAGAAATACTCATAAAAAGGCCAGAGAGTATCCTGGTTaGTGTGAGATATTGGATAGG +
Preference number: 3 (lower is better)
Translates to: GRKKLSVPVQLRNTHKKAREYPG*CEILDR
Trigger: CCTATCCAATATCTCACACAAACCAGGATACTCTCT...GGCCTTTTTATGAGTATTTCTGAGCTGTACAGGGACAGACAACTTTTTCCTGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
3UTR-3UTR CAA 90 bp AAAGTAGAGGTGGCACTTTTTGAGAGACTTGTGATCCTCAGGGATTGGAATAGAACAGAGGACACATACTaGTCACAAGTGAACTTGAGG +
Preference number: 3 (lower is better)
Translates to: KVEVALFERLVILRDWNRTEDTY*SQVNLR
Trigger: CCTCAAGTTCACTTGTGACAAGTATGTGTCCTCTGT...TCTATTCCAATCCCTGAGGATCACAAGTCTCTCAAAAAGTGCCACCTCTACTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
3UTR-3UTR CAA 90 bp AGAAGTCAACATGCAAACAGAGGACACATACTTGTCACAAGTGAACTTGAGGTCATCCAATACAAGGGCTaGGCCATTCTCCTCTTAATC +
Preference number: 3 (lower is better)
Translates to: RSQHANRGHILVTSELEVIQYKG*AILLLI
Trigger: GATTAAGAGGAGAATGGCCAAGCCCTTGTATTGGAT...GACCTCAAGTTCACTTGTGACAAGTATGTGTCCTCTGTTTGCATGTTGACTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636666.1
ENST00000644342.1
ENST00000646800.1
3UTR-3UTR CAA 90 bp TTAAACTTCAATGCAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTCCTTCTCTGATCAGTTaGGAAGTTCAACACTGGTTC +
Preference number: 3 (lower is better)
Translates to: LNFNAEKLALGSPLLLLCPSLIS*EVQHWF
Trigger: GAACCAGTGTTGAACTTCCAAACTGATCAGAGAAGG...ACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTGCATTGAAGTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646800.1
3UTR-3UTR CAA 90 bp TCTATACACCAGGCAGGAAAAAGTTGTCTGTCCCTGTACAGCTCAGAAATACTCAATTTCTTCATTTTCTaGCTGGGGCAAGGCTCTTTC +
Preference number: 3 (lower is better)
Translates to: SIHQAGKSCLSLYSSEILNFFIF*LGQGSF
Trigger: GAAAGAGCCTTGCCCCAGCAAGAAAATGAAGAAATT...GAGTATTTCTGAGCTGTACAGGGACAGACAACTTTTTCCTGCCTGGTGTATAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
3UTR TCA 72 bp TGCTGGGCTTGTCCAAATCTATGGCTTCTAAGAGCCTaGAAGGCATTAGAGCTCTTTTCATCCAATTTACAG +
Preference number: 3 (lower is better)
Translates to: CWACPNLWLLRA*KALELFSSNLQ
Trigger: CTGTAAATTGGATGAAAAGAGCTCTAATGCCTTTCAGGCTCTTAGAAGCCATAGATTTGGACAAGCCCAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
3UTR-3UTR CAA 90 bp AAAAATGCACACACCCGAAATGAGTTCAAACCAGCCGAAACAAAACTCAGGCAGAGCTTCTTTATCATTTaGCTGGTTTCTCTTGGATGG +
Preference number: 3 (lower is better)
Translates to: KNAHTRNEFKPAETKLRQSFFII*LVSLGW
Trigger: CCATCCAAGAGAAACCAGCAAAATGATAAAGAAGCT...CTGCCTGAGTTTTGTTTCGGCTGGTTTGAACTCATTTCGGGTGTGTGCATTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR-3UTR CAA 90 bp AGAAGTCAACATGCAAACAGAGGACACATACTTGTCACAAGTGAACTTGAGGTCAGAAGTTCAATGGTCTaGACATTTCAGATGAGCACC +
Preference number: 3 (lower is better)
Translates to: RSQHANRGHILVTSELEVRSSMV*TFQMST
Trigger: GGTGCTCATCTGAAATGTCAAGACCATTGAACTTCT...GACCTCAAGTTCACTTGTGACAAGTATGTGTCCTCTGTTTGCATGTTGACTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
3UTR-3UTR CAA 90 bp TTAAACTTCAATGCAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACAGCAATAACACAGTaGAAGCCAAGGACAGAAGTT +
Preference number: 3 (lower is better)
Translates to: LNFNAEKLALGSPLLLLCTAITQ*KPRTEV
Trigger: AACTTCTGTCCTTGGCTTCAACTGTGTTATTGCTGT...ACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTGCATTGAAGTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
3UTR-3UTR CAA 90 bp GAAGTCAACATGCAAACAGAGGACACATACTTGTCACAAGTGAACTTGAGGTCATCCATTGCTACTCCTTaGTACCCCACAATACATACT +
Preference number: 3 (lower is better)
Translates to: EVNMQTEDTYLSQVNLRSSIATP*YPTIHT
Trigger: AGTATGTATTGTGGGGTACAAAGGAGTAGCAATGGA...TGACCTCAAGTTCACTTGTGACAAGTATGTGTCCTCTGTTTGCATGTTGACTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
3UTR-3UTR CAA 90 bp AGAAGTCAACATGCAAACAGAGGACACATACTTGTCACAAGTGAACTTGAGGTCTCCATTGCTACTCCTTaGTACCCCACAATACATACT +
Preference number: 3 (lower is better)
Translates to: RSQHANRGHILVTSELEVSIATP*YPTIHT
Trigger: AGTATGTATTGTGGGGTACAAAGGAGTAGCAATGGA...GACCTCAAGTTCACTTGTGACAAGTATGTGTCCTCTGTTTGCATGTTGACTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
3UTR-3UTR CAA 90 bp GACATTAACCAAATCATCCATATTGGTACATTCAAGTGCCATAAAAAGCAAGCTGCTTTGGGCAGTCCATaGCTACTCCTTTGTACCCCA +
Preference number: 3 (lower is better)
Translates to: DINQIIHIGTFKCHKKQAALGSP*LLLCTP
Trigger: TGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGC...AGCTTGCTTTTTATGGCACTTGAATGTACCAATATGGATGATTTGGTTAATGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
3UTR-3UTR CAA 90 bp ATCTTAATTCAGAGAAGGGTTTATGTACAGATCTTGAGTAAATCTGTGTTCCAGGCTTTGGGCAGTCCATaGCTACTCCTTTGTACCCCA +
Preference number: 3 (lower is better)
Translates to: ILIQRRVYVQILSKSVFQALGSP*LLLCTP
Trigger: TGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGC...CTGGAACACAGATTTACTCAAGATCTGTACATAAACCCTTCTCTGAATTAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
3UTR-3UTR CAA 90 bp TTCAACACAAGTACACGAACAAACAGGTCTGAAGTATATCAGGAAAACAAAGTAGCAGAAAAGCTGGCTTaGGGCAGTCCATTGCTACTC +
Preference number: 3 (lower is better)
Translates to: FNTSTRTNRSEVYQENKVAEKLA*GSPLLL
Trigger: GAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTGC...TACTTTGTTTTCCTGATATACTTCAGACCTGTTTGTTCGTGTACTTGTGTTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
3UTR-3UTR CAA 90 bp CAGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAGAAGTTCAATGAAAGAGTTAAAGCTTTaGGGAAGATTACCAACCTGC +
Preference number: 3 (lower is better)
Translates to: QRASYSNNTVEAKDRSSMKELKL*GRLPTC
Trigger: GCAGGTTGGTAATCTTCCCAAAAGCTTTAACTCTTT...CATTGAACTTCTGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
3UTR-3UTR CAA 90 bp TCTATACACCAGGCAGGAAAAAGTTGTCTGTCCCTGTACAGCTCAGAAATACTCAAAGAGTTAAAGCTTTaGGGAAGATTACCAACCTGC +
Preference number: 3 (lower is better)
Translates to: SIHQAGKSCLSLYSSEILKELKL*GRLPTC
Trigger: GCAGGTTGGTAATCTTCCCAAAAGCTTTAACTCTTT...GAGTATTTCTGAGCTGTACAGGGACAGACAACTTTTTCCTGCCTGGTGTATAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
3UTR-3UTR CAA 90 bp GAAGTCAACATGCAAACAGAGGACACATACTTGTCACAAGTGAACTTGAGGTCAAGAGAGTATCCTGGTTaGTGTGAGATATTGGATAGG +
Preference number: 3 (lower is better)
Translates to: EVNMQTEDTYLSQVNLRSREYPG*CEILDR
Trigger: CCTATCCAATATCTCACACAAACCAGGATACTCTCT...TGACCTCAAGTTCACTTGTGACAAGTATGTGTCCTCTGTTTGCATGTTGACTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
3UTR-3UTR CAA 90 bp ATCTTAATTCAGAGAAGGGTTTATGTACAGATCTTGAGTAAATCTGTGTTCCAGCCAGGCAGGAAAAAGTaGTCTGTCCCTGTACAGCTC +
Preference number: 3 (lower is better)
Translates to: ILIQRRVYVQILSKSVFQPGRKK*SVPVQL
Trigger: GAGCTGTACAGGGACAGACAACTTTTTCCTGCCTGG...CTGGAACACAGATTTACTCAAGATCTGTACATAAACCCTTCTCTGAATTAAGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
3UTR-3UTR CAA 90 bp AAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAATACATACTACCAAATCATCCATATaGGTACATTCAAGTGCCATA +
Preference number: 3 (lower is better)
Translates to: KAGFGQSIATPLYPTIHTTKSSI*VHSSAI
Trigger: TATGGCACTTGAATGTACCAATATGGATGATTTGGT...AGTATGTATTGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
3UTR-3UTR CAA 90 bp AAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAATACATACTGACAAGAGAACAATATaGGTAGATGTTGAAGGACAA +
Preference number: 3 (lower is better)
Translates to: KAGFGQSIATPLYPTIHTDKRTI*VDVEGQ
Trigger: TTGTCCTTCAACATCTACCAATATTGTTCTCTTGTC...AGTATGTATTGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
3UTR-3UTR CAA 90 bp TTGGCAGTGTTACCTTTAGGTAATACAAAGCTGGAATGCCCAATATTTTTCCTCGATCTCCGAGGACTCTaGCTGCATTTCAGAAAACTG +
Preference number: 3 (lower is better)
Translates to: LAVLPLGNTKLECPIFFLDLRGL*LHFRKL
Trigger: CAGTTTTCTGAAATGCAGCAAGAGTCCTCGGAGATC...GAGGAAAAATATTGGGCATTCCAGCTTTGTATTACCTAAAGGTAACACTGCCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000636666.1
ENST00000644342.1
ENST00000646800.1
3UTR-3UTR CAA 90 bp AGAAGTCAACATGCAAACAGAGGACACATACTTGTCACAAGTGAACTTGAGGTCTCTTTTGAGTCTGCATaGGTCAGCTTCATCCAATAC +
Preference number: 3 (lower is better)
Translates to: RSQHANRGHILVTSELEVSFESA*VSFIQY
Trigger: GTATTGGATGAAGCTGACCAATGCAGACTCAAAAGA...GACCTCAAGTTCACTTGTGACAAGTATGTGTCCTCTGTTTGCATGTTGACTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636666.1
ENST00000644342.1
ENST00000646800.1
3UTR-3UTR CAA 90 bp GAAGTCAACATGCAAACAGAGGACACATACTTGTCACAAGTGAACTTGAGGTCATCCCCAATTGTCCAATaGAGAAGTTTTTATTCCCCC +
Preference number: 3 (lower is better)
Translates to: EVNMQTEDTYLSQVNLRSSPIVQ*RSFYSP
Trigger: GGGGGAATAAAAACTTCTCAATTGGACAATTGGGGA...TGACCTCAAGTTCACTTGTGACAAGTATGTGTCCTCTGTTTGCATGTTGACTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
3UTR-3UTR CAA 90 bp TCTATACACCAGGCAGGAAAAAGTTGTCTGTCCCTGTACAGCTCAGAAATACTCTCACTGGCTTTCCCCTaGCTATGTTATTTATTCTTC +
Preference number: 3 (lower is better)
Translates to: SIHQAGKSCLSLYSSEILSLAFP*LCYLFF
Trigger: GAAGAATAAATAACATAGCAAGGGGAAAGCCAGTGA...GAGTATTTCTGAGCTGTACAGGGACAGACAACTTTTTCCTGCCTGGTGTATAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
3UTR-3UTR CAA 90 bp TCTATACACCAGGCAGGAAAAAGTTGTCTGTCCCTGTACAGCTCAGAAATACTCGGATGTGCAAAGGATTaGGAAGTATCTTTTAGACAC +
Preference number: 3 (lower is better)
Translates to: SIHQAGKSCLSLYSSEILGCAKD*EVSFRH
Trigger: GTGTCTAAAAGATACTTCCAAATCCTTTGCACATCC...GAGTATTTCTGAGCTGTACAGGGACAGACAACTTTTTCCTGCCTGGTGTATAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
3UTR-3UTR CAA 90 bp AGAAGTCAACATGCAAACAGAGGACACATACTTGTCACAAGTGAACTTGAGGTCAATTTCTTCATTTTCTaGCTGGGGCAAGGCTCTTTC +
Preference number: 3 (lower is better)
Translates to: RSQHANRGHILVTSELEVNFFIF*LGQGSF
Trigger: GAAAGAGCCTTGCCCCAGCAAGAAAATGAAGAAATT...GACCTCAAGTTCACTTGTGACAAGTATGTGTCCTCTGTTTGCATGTTGACTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
3UTR-3UTR CAA 90 bp GGATCAATGAGATCTAGAAGAATCTCTTGGTATAAACTCCCAATAGAAACTGAATTTTGCTGGTTTCTCTaGGATGGGAGAAGGGCAGAG +
Preference number: 3 (lower is better)
Translates to: GSMRSRRISWYKLPIETEFCWFL*DGRRAE
Trigger: CTCTGCCCTTCTCCCATCCAAGAGAAACCAGCAAAA...TTCAGTTTCTATTGGGAGTTTATACCAAGAGATTCTTCTAGATCTCATTGATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
3UTR-3UTR CAA 90 bp TCCATTAGAGCTTTTGGCCCAAAGTGCCTATTTTTCTGTGAGATTTGGTCTCCTAGCTTCTTTATCATTTaGCTGGTTTCTCTTGGATGG +
Preference number: 3 (lower is better)
Translates to: SIRAFGPKCLFFCEIWSPSFFII*LVSLGW
Trigger: CCATCCAAGAGAAACCAGCAAAATGATAAAGAAGCT...AGGAGACCAAATCTCACAGAAAAATAGGCACTTTGGGCCAAAAGCTCTAATGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR-3UTR CAA 90 bp AAAGTAGAGGTGGCACTTTTTGAGAGACTTGTGATCCTCAGGGATTGGAATAGAAAAGAGTTAAAGCTTTaGGGAAGATTACCAACCTGC +
Preference number: 3 (lower is better)
Translates to: KVEVALFERLVILRDWNRKELKL*GRLPTC
Trigger: GCAGGTTGGTAATCTTCCCAAAAGCTTTAACTCTTT...TCTATTCCAATCCCTGAGGATCACAAGTCTCTCAAAAAGTGCCACCTCTACTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
3UTR-3UTR CAA 90 bp GAAGTCAACATGCAAACAGAGGACACATACTTGTCACAAGTGAACTTGAGGTCAAAAGAGTTAAAGCTTTaGGGAAGATTACCAACCTGC +
Preference number: 3 (lower is better)
Translates to: EVNMQTEDTYLSQVNLRSKELKL*GRLPTC
Trigger: GCAGGTTGGTAATCTTCCCAAAAGCTTTAACTCTTT...TGACCTCAAGTTCACTTGTGACAAGTATGTGTCCTCTGTTTGCATGTTGACTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
3UTR-3UTR CAA 90 bp AGAAGTCAACATGCAAACAGAGGACACATACTTGTCACAAGTGAACTTGAGGTCAAAGAGTTAAAGCTTTaGGGAAGATTACCAACCTGC +
Preference number: 3 (lower is better)
Translates to: RSQHANRGHILVTSELEVKELKL*GRLPTC
Trigger: GCAGGTTGGTAATCTTCCCAAAAGCTTTAACTCTTT...GACCTCAAGTTCACTTGTGACAAGTATGTGTCCTCTGTTTGCATGTTGACTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
3UTR-3UTR CAA 90 bp GGCAGGAAAAAGTTGTCTGTCCCTGTACAGCTCAGAAATACTCATAAAAAGGCCGACAAGAGAACAATATaGGTAGATGTTGAAGGACAA +
Preference number: 3 (lower is better)
Translates to: GRKKLSVPVQLRNTHKKADKRTI*VDVEGQ
Trigger: TTGTCCTTCAACATCTACCAATATTGTTCTCTTGTC...GGCCTTTTTATGAGTATTTCTGAGCTGTACAGGGACAGACAACTTTTTCCTGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
3UTR-3UTR CAA 90 bp CAGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAGAAGTTCAATGGACAAGAGAACAATATaGGTAGATGTTGAAGGACAA +
Preference number: 3 (lower is better)
Translates to: QRASYSNNTVEAKDRSSMDKRTI*VDVEGQ
Trigger: TTGTCCTTCAACATCTACCAATATTGTTCTCTTGTC...CATTGAACTTCTGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
3UTR-3UTR CAA 90 bp TCTATACACCAGGCAGGAAAAAGTTGTCTGTCCCTGTACAGCTCAGAAATACTCATCATTCTTACCCTATaGATAGAAGAAATGGCCTCT +
Preference number: 3 (lower is better)
Translates to: SIHQAGKSCLSLYSSEILIILTL*IEEMAS
Trigger: AGAGGCCATTTCTTCTATCAATAGGGTAAGAATGAT...GAGTATTTCTGAGCTGTACAGGGACAGACAACTTTTTCCTGCCTGGTGTATAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000636666.1
ENST00000644342.1
ENST00000646800.1
3UTR-3UTR CAA 90 bp ACTTTCATACTGCTCTTGCTCTCCAGGCCGAATCTTGATGAAAAAGCTACTACGATTCTGTTTCTGCTTTaGATTGAGGGCTTTCTTCTT +
Preference number: 3 (lower is better)
Translates to: TFILLLLSRPNLDEKATTILFLL*IEGFLL
Trigger: AAGAAGAAAGCCCTCAATCAAAAGCAGAAACAGAAT...CGTAGTAGCTTTTTCATCAAGATTCGGCCTGGAGAGCAAGAGCAGTATGAAAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643155.1
3UTR-3UTR CAA 90 bp AGAAGTCAACATGCAAACAGAGGACACATACTTGTCACAAGTGAACTTGAGGTCGGATGTGCAAAGGATTaGGAAGTATCTTTTAGACAC +
Preference number: 3 (lower is better)
Translates to: RSQHANRGHILVTSELEVGCAKD*EVSFRH
Trigger: GTGTCTAAAAGATACTTCCAAATCCTTTGCACATCC...GACCTCAAGTTCACTTGTGACAAGTATGTGTCCTCTGTTTGCATGTTGACTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
3UTR-3UTR CAA 90 bp TTGGCAGTGTTACCTTTAGGTAATACAAAGCTGGAATGCCCAATATTTTTCCTCAGAAGTTCAATGGTCTaGACATTTCAGATGAGCACC +
Preference number: 3 (lower is better)
Translates to: LAVLPLGNTKLECPIFFLRSSMV*TFQMST
Trigger: GGTGCTCATCTGAAATGTCAAGACCATTGAACTTCT...GAGGAAAAATATTGGGCATTCCAGCTTTGTATTACCTAAAGGTAACACTGCCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000636666.1
ENST00000644342.1
ENST00000646800.1
3UTR-3UTR CAA 90 bp GGACACATACTTGTCACAAGTGAACTTGAGGTCACAAAGCCATTGATTAAAAACACAGCAATAACACAGTaGAAGCCAAGGACAGAAGTT +
Preference number: 3 (lower is better)
Translates to: GHILVTSELEVTKPLIKNTAITQ*KPRTEV
Trigger: AACTTCTGTCCTTGGCTTCAACTGTGTTATTGCTGT...GTTTTTAATCAATGGCTTTGTGACCTCAAGTTCACTTGTGACAAGTATGTGTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
3UTR-3UTR CAA 90 bp ATTACTTTGGTGCTGCCAATCACTAATTGGGCAATGCCAATAATGAAGCATTCTACAGCAATAACACAGTaGAAGCCAAGGACAGAAGTT +
Preference number: 3 (lower is better)
Translates to: ITLVLPITNWAMPIMKHSTAITQ*KPRTEV
Trigger: AACTTCTGTCCTTGGCTTCAACTGTGTTATTGCTGT...AGAATGCTTCATTATTGGCATTGCCCAATTAGTGATTGGCAGCACCAAAGTAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
3UTR-3UTR CAA 90 bp TTGGCAGTGTTACCTTTAGGTAATACAAAGCTGGAATGCCCAATATTTTTCCTCAGAGAGTATCCTGGTTaGTGTGAGATATTGGATAGG +
Preference number: 3 (lower is better)
Translates to: LAVLPLGNTKLECPIFFLREYPG*CEILDR
Trigger: CCTATCCAATATCTCACACAAACCAGGATACTCTCT...GAGGAAAAATATTGGGCATTCCAGCTTTGTATTACCTAAAGGTAACACTGCCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000636666.1
ENST00000644342.1
ENST00000646800.1
3UTR-3UTR CAA 90 bp GGACACATACTTGTCACAAGTGAACTTGAGGTCACAAAGCCATTGATTAAAAACAGAGAGTATCCTGGTTaGTGTGAGATATTGGATAGG +
Preference number: 3 (lower is better)
Translates to: GHILVTSELEVTKPLIKNREYPG*CEILDR
Trigger: CCTATCCAATATCTCACACAAACCAGGATACTCTCT...GTTTTTAATCAATGGCTTTGTGACCTCAAGTTCACTTGTGACAAGTATGTGTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
3UTR-3UTR CAA 90 bp AAAGTAGAGGTGGCACTTTTTGAGAGACTTGTGATCCTCAGGGATTGGAATAGAGTTTATGTACAGATCTaGAGTAAATCTGTGTTCCAG +
Preference number: 3 (lower is better)
Translates to: KVEVALFERLVILRDWNRVYVQI*SKSVFQ
Trigger: CTGGAACACAGATTTACTCAAGATCTGTACATAAAC...TCTATTCCAATCCCTGAGGATCACAAGTCTCTCAAAAAGTGCCACCTCTACTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
3UTR-3UTR CAA 90 bp AGAAGTCAACATGCAAACAGAGGACACATACTTGTCACAAGTGAACTTGAGGTCACCAAATCATCCATATaGGTACATTCAAGTGCCATA +
Preference number: 3 (lower is better)
Translates to: RSQHANRGHILVTSELEVTKSSI*VHSSAI
Trigger: TATGGCACTTGAATGTACCAATATGGATGATTTGGT...GACCTCAAGTTCACTTGTGACAAGTATGTGTCCTCTGTTTGCATGTTGACTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
3UTR-3UTR CAA 90 bp GGACACATACTTGTCACAAGTGAACTTGAGGTCACAAAGCCATTGATTAAAAACTCCCCAATTGTCCAATaGAGAAGTTTTTATTCCCCC +
Preference number: 3 (lower is better)
Translates to: GHILVTSELEVTKPLIKNSPIVQ*RSFYSP
Trigger: GGGGGAATAAAAACTTCTCAATTGGACAATTGGGGA...GTTTTTAATCAATGGCTTTGTGACCTCAAGTTCACTTGTGACAAGTATGTGTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
3UTR-3UTR CAA 90 bp CTTCATCCAATACAAGGGCTTGGCCATTCTCCTCTTAATCATTCTTACCCTATTGGATGTGCAAAGGATTaGGAAGTATCTTTTAGACAC +
Preference number: 3 (lower is better)
Translates to: LHPIQGLGHSPLNHSYPIGCAKD*EVSFRH
Trigger: GTGTCTAAAAGATACTTCCAAATCCTTTGCACATCC...AATAGGGTAAGAATGATTAAGAGGAGAATGGCCAAGCCCTTGTATTGGATGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000644342.1
ENST00000646800.1
3UTR CCA 72 bp AAACATTTATTCCCTCCATTTTCACAATTGGTCATGTaGACAAAGTACTCACTCCTTCTCCTGTGGGGATTT +
Preference number: 3 (lower is better)
Translates to: KHLFPPFSQLVM*TKYSLLLLWGF
Trigger: AAATCCCCACAGGAGAAGGAGTGAGTACTTTGTCCACATGACCAATTGTGAAAATGGAGGGAATAAATGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642643.1
ENST00000648891.1
3UTR-3UTR CAA 90 bp GAGACATTAACCAAATCATCCATATTGGTACATTCAAGTGCCATAAAAAGCAAGACAGAGGACACATACTaGTCACAAGTGAACTTGAGG +
Preference number: 3 (lower is better)
Translates to: ETLTKSSILVHSSAIKSKTEDTY*SQVNLR
Trigger: CCTCAAGTTCACTTGTGACAAGTATGTGTCCTCTGT...CTTGCTTTTTATGGCACTTGAATGTACCAATATGGATGATTTGGTTAATGTCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
3UTR-3UTR CAA 90 bp ATATTGGCAGTGTTACCTTTAGGTAATACAAAGCTGGAATGCCCAATATTTTTCACAGAGGACACATACTaGTCACAAGTGAACTTGAGG +
Preference number: 3 (lower is better)
Translates to: ILAVLPLGNTKLECPIFFTEDTY*SQVNLR
Trigger: CCTCAAGTTCACTTGTGACAAGTATGTGTCCTCTGT...GAAAAATATTGGGCATTCCAGCTTTGTATTACCTAAAGGTAACACTGCCAATAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644342.1
ENST00000646800.1
3UTR-3UTR CAA 90 bp TTCAACACAAGTACACGAACAAACAGGTCTGAAGTATATCAGGAAAACAAAGTAAGAAGTTCAATGGTCTaGACATTTCAGATGAGCACC +
Preference number: 3 (lower is better)
Translates to: FNTSTRTNRSEVYQENKVRSSMV*TFQMST
Trigger: GGTGCTCATCTGAAATGTCAAGACCATTGAACTTCT...TACTTTGTTTTCCTGATATACTTCAGACCTGTTTGTTCGTGTACTTGTGTTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
3UTR-3UTR CAA 90 bp GAGACATTAACCAAATCATCCATATTGGTACATTCAAGTGCCATAAAAAGCAAGAGAAGTTCAATGGTCTaGACATTTCAGATGAGCACC +
Preference number: 3 (lower is better)
Translates to: ETLTKSSILVHSSAIKSKRSSMV*TFQMST
Trigger: GGTGCTCATCTGAAATGTCAAGACCATTGAACTTCT...CTTGCTTTTTATGGCACTTGAATGTACCAATATGGATGATTTGGTTAATGTCTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
3UTR-3UTR CAA 90 bp ATCTTAATTCAGAGAAGGGTTTATGTACAGATCTTGAGTAAATCTGTGTTCCAGAGAAGTTCAATGGTCTaGACATTTCAGATGAGCACC +
Preference number: 3 (lower is better)
Translates to: ILIQRRVYVQILSKSVFQRSSMV*TFQMST
Trigger: GGTGCTCATCTGAAATGTCAAGACCATTGAACTTCT...CTGGAACACAGATTTACTCAAGATCTGTACATAAACCCTTCTCTGAATTAAGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
3UTR-3UTR CAA 90 bp TTCAACACAAGTACACGAACAAACAGGTCTGAAGTATATCAGGAAAACAAAGTAACAGCAATAACACAGTaGAAGCCAAGGACAGAAGTT +
Preference number: 3 (lower is better)
Translates to: FNTSTRTNRSEVYQENKVTAITQ*KPRTEV
Trigger: AACTTCTGTCCTTGGCTTCAACTGTGTTATTGCTGT...TACTTTGTTTTCCTGATATACTTCAGACCTGTTTGTTCGTGTACTTGTGTTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
3UTR-3UTR CAA 90 bp ATCTTAATTCAGAGAAGGGTTTATGTACAGATCTTGAGTAAATCTGTGTTCCAGACAGCAATAACACAGTaGAAGCCAAGGACAGAAGTT +
Preference number: 3 (lower is better)
Translates to: ILIQRRVYVQILSKSVFQTAITQ*KPRTEV
Trigger: AACTTCTGTCCTTGGCTTCAACTGTGTTATTGCTGT...CTGGAACACAGATTTACTCAAGATCTGTACATAAACCCTTCTCTGAATTAAGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
3UTR-3UTR CAA 90 bp ATCTTAATTCAGAGAAGGGTTTATGTACAGATCTTGAGTAAATCTGTGTTCCAGTCCATTGCTACTCCTTaGTACCCCACAATACATACT +
Preference number: 3 (lower is better)
Translates to: ILIQRRVYVQILSKSVFQSIATP*YPTIHT
Trigger: AGTATGTATTGTGGGGTACAAAGGAGTAGCAATGGA...CTGGAACACAGATTTACTCAAGATCTGTACATAAACCCTTCTCTGAATTAAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
3UTR-3UTR CAA 90 bp TTCAACACAAGTACACGAACAAACAGGTCTGAAGTATATCAGGAAAACAAAGTAAGAGAGTATCCTGGTTaGTGTGAGATATTGGATAGG +
Preference number: 3 (lower is better)
Translates to: FNTSTRTNRSEVYQENKVREYPG*CEILDR
Trigger: CCTATCCAATATCTCACACAAACCAGGATACTCTCT...TACTTTGTTTTCCTGATATACTTCAGACCTGTTTGTTCGTGTACTTGTGTTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
3UTR-3UTR CAA 90 bp TTGGCAGTGTTACCTTTAGGTAATACAAAGCTGGAATGCCCAATATTTTTCCTCGTTTATGTACAGATCTaGAGTAAATCTGTGTTCCAG +
Preference number: 3 (lower is better)
Translates to: LAVLPLGNTKLECPIFFLVYVQI*SKSVFQ
Trigger: CTGGAACACAGATTTACTCAAGATCTGTACATAAAC...GAGGAAAAATATTGGGCATTCCAGCTTTGTATTACCTAAAGGTAACACTGCCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000636666.1
ENST00000644342.1
ENST00000646800.1
3UTR-3UTR CAA 90 bp ATCTTAATTCAGAGAAGGGTTTATGTACAGATCTTGAGTAAATCTGTGTTCCAGTCCCCAATTGTCCAATaGAGAAGTTTTTATTCCCCC +
Preference number: 3 (lower is better)
Translates to: ILIQRRVYVQILSKSVFQSPIVQ*RSFYSP
Trigger: GGGGGAATAAAAACTTCTCAATTGGACAATTGGGGA...CTGGAACACAGATTTACTCAAGATCTGTACATAAACCCTTCTCTGAATTAAGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
3UTR-3UTR CAA 90 bp TTCAACACAAGTACACGAACAAACAGGTCTGAAGTATATCAGGAAAACAAAGTAAATTTCTTCATTTTCTaGCTGGGGCAAGGCTCTTTC +
Preference number: 3 (lower is better)
Translates to: FNTSTRTNRSEVYQENKVNFFIF*LGQGSF
Trigger: GAAAGAGCCTTGCCCCAGCAAGAAAATGAAGAAATT...TACTTTGTTTTCCTGATATACTTCAGACCTGTTTGTTCGTGTACTTGTGTTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
3UTR TCA 72 bp CAATATTTTTCCTCTGATAATTGTGATGGTATCTTTTaGGTCTGCATTGGTCAGCTTCATCCAATACAAGGG +
Preference number: 3 (lower is better)
Translates to: QYFSSDNCDGIF*VCIGQLHPIQG
Trigger: CCCTTGTATTGGATGAAGCTGACCAATGCAGACTCAAAAGATACCATCACAATTATCAGAGGAAAAATATTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000636666.1
ENST00000644342.1
ENST00000646800.1
3UTR-3UTR CAA 90 bp GGATCAATGAGATCTAGAAGAATCTCTTGGTATAAACTCCCAATAGAAACTGAAAGCTTCTTTATCATTTaGCTGGTTTCTCTTGGATGG +
Preference number: 3 (lower is better)
Translates to: GSMRSRRISWYKLPIETESFFII*LVSLGW
Trigger: CCATCCAAGAGAAACCAGCAAAATGATAAAGAAGCT...TTCAGTTTCTATTGGGAGTTTATACCAAGAGATTCTTCTAGATCTCATTGATCC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
3UTR-3UTR CAA 90 bp GACATTAACCAAATCATCCATATTGGTACATTCAAGTGCCATAAAAAGCAAGCTAAAGAGTTAAAGCTTTaGGGAAGATTACCAACCTGC +
Preference number: 3 (lower is better)
Translates to: DINQIIHIGTFKCHKKQAKELKL*GRLPTC
Trigger: GCAGGTTGGTAATCTTCCCAAAAGCTTTAACTCTTT...AGCTTGCTTTTTATGGCACTTGAATGTACCAATATGGATGATTTGGTTAATGTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
3UTR-3UTR CAA 90 bp ATCTTAATTCAGAGAAGGGTTTATGTACAGATCTTGAGTAAATCTGTGTTCCAGAAAGAGTTAAAGCTTTaGGGAAGATTACCAACCTGC +
Preference number: 3 (lower is better)
Translates to: ILIQRRVYVQILSKSVFQKELKL*GRLPTC
Trigger: GCAGGTTGGTAATCTTCCCAAAAGCTTTAACTCTTT...CTGGAACACAGATTTACTCAAGATCTGTACATAAACCCTTCTCTGAATTAAGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
3UTR-3UTR CAA 90 bp ATATTGGCAGTGTTACCTTTAGGTAATACAAAGCTGGAATGCCCAATATTTTTCTCACTGGCTTTCCCCTaGCTATGTTATTTATTCTTC +
Preference number: 3 (lower is better)
Translates to: ILAVLPLGNTKLECPIFFSLAFP*LCYLFF
Trigger: GAAGAATAAATAACATAGCAAGGGGAAAGCCAGTGA...GAAAAATATTGGGCATTCCAGCTTTGTATTACCTAAAGGTAACACTGCCAATAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644342.1
ENST00000646800.1
3UTR-3UTR CAA 90 bp ATATTGGCAGTGTTACCTTTAGGTAATACAAAGCTGGAATGCCCAATATTTTTCACCAAATCATCCATATaGGTACATTCAAGTGCCATA +
Preference number: 3 (lower is better)
Translates to: ILAVLPLGNTKLECPIFFTKSSI*VHSSAI
Trigger: TATGGCACTTGAATGTACCAATATGGATGATTTGGT...GAAAAATATTGGGCATTCCAGCTTTGTATTACCTAAAGGTAACACTGCCAATAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644342.1
ENST00000646800.1
CDS-3UTR TCA 90 bp GCATCTTTCCGAGGTCTGTGGATCAGGGCTGGTGCCCTCCCTGGCATTCTGATATGGGTCACGGGGCCCTaGCGGGTCCCGCAGTTAGGC +
Preference number: 4 (lower is better)
Translates to: ASFRGLWIRAGALPGILIWVTGP*RVPQLG
Trigger: GCCTAACTGCGGGACCCGTCAGGGCCCCGTGACCCA...TATCAGAATGCCAGGGAGGGCACCAGCCCTGATCCACAGACCTCGGAAAGATGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR GCA 90 bp AGGTGCAGAAGTGGGCCGAGGACTTCGGTCTGCCGAATCGACAGCTGCTGCTCCTCCTGCGCCCGCCACTaGTGCAGCCCGACGAACAAT +
Preference number: 4 (lower is better)
Translates to: RCRSGPRTSVCRIDSCCSSCARH*CSPTNN
Trigger: ATTGTTCGTCGGGCTGCAGCAGTGGCGGGCGCAGGA...GGAGCAGCAGCTGTCGATTCGGCAGACCGAAGTCCTCGGCCCACTTCTGCACCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648891.1
CDS-3UTR TCA 90 bp CGAATCGACAGCTGCTGCTCCATCGAGGCTCCGGGACGCCCGTTTACTTGCTGTCCGGCTGCTGCTGGCTaGCTGACTAAACGCACCAGC +
Preference number: 4 (lower is better)
Translates to: RIDSCCSIEAPGRPFTCCPAAAG*LTKRTS
Trigger: GCTGGTGCGTTTAGTCAGTCAGCCAGCAGCAGCCGG...ACAGCAAGTAAACGGGCGTCCCGGAGCCTCGATGGAGCAGCAGCTGTCGATTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648891.1
CDS-3UTR GCA 90 bp AGTGGGCCGAGGACTTCGGTCTGCCGAATCGACAGCTGCTGCTCCATCGAGGCTCCGAGGACTTCGGTCTaGCGAATCGACAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: SGPRTSVCRIDSCCSIEAPRTSV*RIDSCC
Trigger: GCAGCAGCTGTCGATTCGGCAGACCGAAGTCCTCGG...AGCCTCGATGGAGCAGCAGCTGTCGATTCGGCAGACCGAAGTCCTCGGCCCACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
CDS-3UTR GCA 90 bp AGGTGCAGAAGTGGGCCGAGGACTTCGGTCTGCCGAATCGACAGCTGCTGCTCCGGCTCTGGCTCAGCTTaGTCAGGTGGCTCGTCTTCC +
Preference number: 4 (lower is better)
Translates to: RCRSGPRTSVCRIDSCCSGSGSA*SGGSSS
Trigger: GGAAGACGAGCCACCTGAGCAAGCTGAGCCAGAGCC...GGAGCAGCAGCTGTCGATTCGGCAGACCGAAGTCCTCGGCCCACTTCTGCACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
CDS-3UTR TCA 90 bp GCATCTTTCCGAGGTCTGTGGATCAGGGCTGGTGCCCTCCCTGGCATTCTGATAGCCCTTGAGCCCCAGTaGCTGCTGCCCGATACCCAC +
Preference number: 4 (lower is better)
Translates to: ASFRGLWIRAGALPGILIALEPQ*LLPDTH
Trigger: GTGGGTATCGGGCAGCAGTCACTGGGGCTCAAGGGC...TATCAGAATGCCAGGGAGGGCACCAGCCCTGATCCACAGACCTCGGAAAGATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp TCCAAAGGGGATAAGACTAGGGAGAGACGCGGAAGTCCCACTAAGCTGGCTTTGTGGGTCACGGGGCCCTaGCGGGTCCCGCAGTTAGGC +
Preference number: 4 (lower is better)
Translates to: SKGDKTRERRGSPTKLALWVTGP*RVPQLG
Trigger: GCCTAACTGCGGGACCCGTCAGGGCCCCGTGACCCA...CAAAGCCAGCTTAGTGGGACTTCCGCGTCTCTCCCTAGTCTTATCCCCTTTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR GCA 90 bp TGGGCCGAGGACTTCGGTCTGCCGAATCGACAGCTGCTGCTCCATCGAGGCTCCACAGGGCAGACGTCCTaGAACTATGTCCTGCCGAAG +
Preference number: 4 (lower is better)
Translates to: WAEDFGLPNRQLLLHRGSTGQTS*NYVLPK
Trigger: CTTCGGCAGGACATAGTTGCAGGACGTCTGCCCTGT...GGAGCCTCGATGGAGCAGCAGCTGTCGATTCGGCAGACCGAAGTCCTCGGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
CDS-3UTR GCA 90 bp GCTCTGGCTCCAGTTCCCGAGGTTTGTTGTCTCCTCACCCCCAGCTGCCAAGCACCGAGGACTTCGGTCTaGCGAATCGACAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: ALAPVPEVCCLLTPSCQAPRTSV*RIDSCC
Trigger: GCAGCAGCTGTCGATTCGGCAGACCGAAGTCCTCGG...TGCTTGGCAGCTGGGGGTGAGGAGACAACAAACCTCGGGAACTGGAGCCAGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR GCA 90 bp TGGGCCGAGGACTTCGGTCTGCCGAATCGACAGCTGCTGCTCCATCGAGGCTCCCTGAGTAATGGCAGGTaGAGAAGTGGGCCGAGGACT +
Preference number: 4 (lower is better)
Translates to: WAEDFGLPNRQLLLHRGSLSNGR*RSGPRT
Trigger: AGTCCTCGGCCCACTTCTGCACCTGCCATTACTCAG...GGAGCCTCGATGGAGCAGCAGCTGTCGATTCGGCAGACCGAAGTCCTCGGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
CDS-3UTR GCA 90 bp GCTCTGGCTCCAGTTCCCGAGGTTTGTTGTCTCCTCACCCCCAGCTGCCAAGCAGGCTCTGGCTCAGCTTaGTCAGGTGGCTCGTCTTCC +
Preference number: 4 (lower is better)
Translates to: ALAPVPEVCCLLTPSCQAGSGSA*SGGSSS
Trigger: GGAAGACGAGCCACCTGAGCAAGCTGAGCCAGAGCC...TGCTTGGCAGCTGGGGGTGAGGAGACAACAAACCTCGGGAACTGGAGCCAGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR GCA 90 bp GCTCTGGCTCCAGTTCCCGAGGTTTGTTGTCTCCTCACCCCCAGCTGCCAAGCACCGAGATCGCGCCACTaGACTCCAGCTTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: ALAPVPEVCCLLTPSCQAPRSRH*TPAWAT
Trigger: TGTTGCCCAAGCTGGAGTGCAGTGGCGCGATCTCGG...TGCTTGGCAGCTGGGGGTGAGGAGACAACAAACCTCGGGAACTGGAGCCAGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR GCA 90 bp AGTGGGCCGAGGACTTCGGTCTGCCGAATCGACAGCTGCTGCTCCATCGAGGCTCTGAGAGGTAGAGGTTaGGGTGAGCTGAGATGGCGC +
Preference number: 4 (lower is better)
Translates to: SGPRTSVCRIDSCCSIEALRGRG*GELRWR
Trigger: GCGCCATCTCAGCTCACCGCAACCTCTACCTCTCAG...AGCCTCGATGGAGCAGCAGCTGTCGATTCGGCAGACCGAAGTCCTCGGCCCACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648891.1
CDS-3UTR GCA 90 bp TGGGCCGAGGACTTCGGTCTGCCGAATCGACAGCTGCTGCTCCATCGAGGCTCCTCATACTGCTCTTGCTaGCAGGCACGGTGGCTTACG +
Preference number: 4 (lower is better)
Translates to: WAEDFGLPNRQLLLHRGSSYCSC*QARWLT
Trigger: CGTAAGCCACCGTGCCTGGCAGCAAGAGCAGTATGA...GGAGCCTCGATGGAGCAGCAGCTGTCGATTCGGCAGACCGAAGTCCTCGGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648891.1
CDS-3UTR TCA 90 bp TCGACAGCTGCTGCTCCATCGAGGCTCCGGGACGCCCGTTTACTTGCTGTACGCAACTCCAAGTCAGCCTaGGCTGGAGTCATGGACCTG +
Preference number: 4 (lower is better)
Translates to: STAAAPSRLRDARLLAVRNSKSA*AGVMDL
Trigger: CAGGTCCATGACTCCAGCTCAGGCTGACTTGGAGTT...GCGTACAGCAAGTAAACGGGCGTCCCGGAGCCTCGATGGAGCAGCAGCTGTCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
CDS-3UTR TCA 90 bp AGGACTTCGGTCTGCCGAATCGACAGCTGCTGCTCCATCGAGGCTCCGGGACGCGGGCAGCCTCATAAGTaGTGGTCTTGGTCTCAGTGT +
Preference number: 4 (lower is better)
Translates to: RTSVCRIDSCCSIEAPGRGQPHK*WSWSQC
Trigger: ACACTGAGACCAAGACCATCACTTATGAGGCTGCCC...GCGTCCCGGAGCCTCGATGGAGCAGCAGCTGTCGATTCGGCAGACCGAAGTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643155.1
CDS-3UTR TCA 90 bp GCTCTGGCTCCAGTTCCCGAGGTTTGTTGTCTCCTCACCCCCAGCTGCCAAGCAACAGACCTCAGCTGGTaGGTGGGAATGAGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: ALAPVPEVCCLLTPSCQATDLSW*VGMSRA
Trigger: AGCCCTGCTCATTCCCACTCACCAGCTGAGGTCTGT...TGCTTGGCAGCTGGGGGTGAGGAGACAACAAACCTCGGGAACTGGAGCCAGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR TCA 90 bp GCTCTGGCTCCAGTTCCCGAGGTTTGTTGTCTCCTCACCCCCAGCTGCCAAGCAGGCAAGAGAACTGCTTaGACCCAGGAGGCGGAGGTT +
Preference number: 4 (lower is better)
Translates to: ALAPVPEVCCLLTPSCQAGKRTA*TQEAEV
Trigger: AACCTCCGCCTCCTGGGTTCAAGCAGTTCTCTTGCC...TGCTTGGCAGCTGGGGGTGAGGAGACAACAAACCTCGGGAACTGGAGCCAGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR GCA 90 bp AGGACTTCGGTCTGCCGAATCGACAGCTGCTGCTCCATCGAGGCTCCGGGACGCGACATGTCTGGGTGCTaGTCCTTTGCCTCCTTGATG +
Preference number: 4 (lower is better)
Translates to: RTSVCRIDSCCSIEAPGRDMSGC*SFASLM
Trigger: CATCAAGGAGGCAAAGGAGCAGCACCCAGACATGTC...GCGTCCCGGAGCCTCGATGGAGCAGCAGCTGTCGATTCGGCAGACCGAAGTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643155.1
CDS-3UTR GCA 90 bp GCTCTGGCTCCAGTTCCCGAGGTTTGTTGTCTCCTCACCCCCAGCTGCCAAGCAGTGGATCAGGGCTGGTaGCCTCCCTGGCATTCTGAT +
Preference number: 4 (lower is better)
Translates to: ALAPVPEVCCLLTPSCQAVDQGW*PPWHSD
Trigger: ATCAGAATGCCAGGGAGGGCACCAGCCCTGATCCAC...TGCTTGGCAGCTGGGGGTGAGGAGACAACAAACCTCGGGAACTGGAGCCAGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR GCA 90 bp GCTCTGGCTCCAGTTCCCGAGGTTTGTTGTCTCCTCACCCCCAGCTGCCAAGCATTGAGCCCCAGTGACTaGTGCCCGATACCCACTGTC +
Preference number: 4 (lower is better)
Translates to: ALAPVPEVCCLLTPSCQALSPSD*CPIPTV
Trigger: GACAGTGGGTATCGGGCAGCAGTCACTGGGGCTCAA...TGCTTGGCAGCTGGGGGTGAGGAGACAACAAACCTCGGGAACTGGAGCCAGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR CCA 90 bp AGTGGGCCGAGGACTTCGGTCTGCCGAATCGACAGCTGCTGCTCCATCGAGGCTCACGCCATGGAGTTCTaGGTCGTAGTCTCCCAGTTC +
Preference number: 4 (lower is better)
Translates to: SGPRTSVCRIDSCCSIEAHAMEF*VVVSQF
Trigger: GAACTGGGAGACTACGACCCAGAACTCCATGGCGTG...AGCCTCGATGGAGCAGCAGCTGTCGATTCGGCAGACCGAAGTCCTCGGCCCACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
CDS-3UTR CCA 90 bp TCGACAGCTGCTGCTCCATCGAGGCTCCGGGACGCCCGTTTACTTGCTGTACGCCCTTCCATGCTTCTGTaGGCTCTGGCTCAGCTTGCT +
Preference number: 4 (lower is better)
Translates to: STAAAPSRLRDARLLAVRPSMLL*ALAQLA
Trigger: AGCAAGCTGAGCCAGAGCCCACAGAAGCATGGAAGG...GCGTACAGCAAGTAAACGGGCGTCCCGGAGCCTCGATGGAGCAGCAGCTGTCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
CDS-3UTR TCA 90 bp AGGACTTCGGTCTGCCGAATCGACAGCTGCTGCTCCATCGAGGCTCCGGGACGCAAGATGGGTCTGTTTTaGGTTCCGGTTCAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: RTSVCRIDSCCSIEAPGRKMGLF*VPVQEL
Trigger: CAGCTCCTGAACCGGAACTCAAAACAGACCCATCTT...GCGTCCCGGAGCCTCGATGGAGCAGCAGCTGTCGATTCGGCAGACCGAAGTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
CDS-3UTR TCA 90 bp GCTCTGGCTCCAGTTCCCGAGGTTTGTTGTCTCCTCACCCCCAGCTGCCAAGCAAACTCCAAGTCAGCCTaGGCTGGAGTCATGGACCTG +
Preference number: 4 (lower is better)
Translates to: ALAPVPEVCCLLTPSCQANSKSA*AGVMDL
Trigger: CAGGTCCATGACTCCAGCTCAGGCTGACTTGGAGTT...TGCTTGGCAGCTGGGGGTGAGGAGACAACAAACCTCGGGAACTGGAGCCAGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR TCA 90 bp TCCAAAGGGGATAAGACTAGGGAGAGACGCGGAAGTCCCACTAAGCTGGCTTTGGCCCTTGAGCCCCAGTaGCTGCTGCCCGATACCCAC +
Preference number: 4 (lower is better)
Translates to: SKGDKTRERRGSPTKLALALEPQ*LLPDTH
Trigger: GTGGGTATCGGGCAGCAGTCACTGGGGCTCAAGGGC...CAAAGCCAGCTTAGTGGGACTTCCGCGTCTCTCCCTAGTCTTATCCCCTTTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp GCTCTGGCTCCAGTTCCCGAGGTTTGTTGTCTCCTCACCCCCAGCTGCCAAGCACGAAGCCGAGAGAAGTaGGTTGGTGACAGAGCTGAG +
Preference number: 4 (lower is better)
Translates to: ALAPVPEVCCLLTPSCQARSREK*VGDRAE
Trigger: CTCAGCTCTGTCACCAACTCACTTCTCTCGGCTTCG...TGCTTGGCAGCTGGGGGTGAGGAGACAACAAACCTCGGGAACTGGAGCCAGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR TCA 90 bp TCGACAGCTGCTGCTCCATCGAGGCTCCGGGACGCCCGTTTACTTGCTGTACGCTCCCCAGTCTGGTCTTaGATTCCTGAGCTTGAGCGA +
Preference number: 4 (lower is better)
Translates to: STAAAPSRLRDARLLAVRSPVWS*IPELER
Trigger: TCGCTCAAGCTCAGGAATTCAAGACCAGACTGGGGA...GCGTACAGCAAGTAAACGGGCGTCCCGGAGCCTCGATGGAGCAGCAGCTGTCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642643.1
CDS-3UTR GCA 90 bp CAGAAGTGGGCCGAGGACTTCGGTCTGCCGAATCGACAGCTGCTGCTCCATCGAGGACGCCCGTTTACTTaGTGTACGCTCGAAGTGTGG +
Preference number: 4 (lower is better)
Translates to: QKWAEDFGLPNRQLLLHRGRPFT*CTLEVW
Trigger: CCACACTTCGAGCGTACAGCAAGTAAACGGGCGTCC...TCGATGGAGCAGCAGCTGTCGATTCGGCAGACCGAAGTCCTCGGCCCACTTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
CDS-3UTR GCA 90 bp CAGAAGTGGGCCGAGGACTTCGGTCTGCCGAATCGACAGCTGCTGCTCCATCGACTGAGTAATGGCAGGTaGAGAAGTGGGCCGAGGACT +
Preference number: 4 (lower is better)
Translates to: QKWAEDFGLPNRQLLLHRLSNGR*RSGPRT
Trigger: AGTCCTCGGCCCACTTCTGCACCTGCCATTACTCAG...TCGATGGAGCAGCAGCTGTCGATTCGGCAGACCGAAGTCCTCGGCCCACTTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
CDS-3UTR GCA 90 bp CTAGGGAGAGACGCGGAAGTCCCACTAAGCTGGCTTTGGCTTCCAACACAGCTGCCTTTAAGAGGTTCCTaGCACTTTGCCCCGCCGGGG +
Preference number: 4 (lower is better)
Translates to: LGRDAEVPLSWLWLPTQLPLRGS*HFAPPG
Trigger: CCCCGGCGGGGCAAAGTGGCAGGAACCTCTTAAAGG...CAGCTGTGTTGGAAGCCAAAGCCAGCTTAGTGGGACTTCCGCGTCTCTCCCTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642937.2
ENST00000647103.1
CDS-3UTR CCA 90 bp GCTCTGGCTCCAGTTCCCGAGGTTTGTTGTCTCCTCACCCCCAGCTGCCAAGCACACGCCATGGAGTTCTaGGTCGTAGTCTCCCAGTTC +
Preference number: 4 (lower is better)
Translates to: ALAPVPEVCCLLTPSCQAHAMEF*VVVSQF
Trigger: GAACTGGGAGACTACGACCCAGAACTCCATGGCGTG...TGCTTGGCAGCTGGGGGTGAGGAGACAACAAACCTCGGGAACTGGAGCCAGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR CCA 90 bp GCTCTGGCTCCAGTTCCCGAGGTTTGTTGTCTCCTCACCCCCAGCTGCCAAGCACTGGGGCTGAGATCCTaGGCAGAAATTTCCCGTGAG +
Preference number: 4 (lower is better)
Translates to: ALAPVPEVCCLLTPSCQALGLRS*AEISRE
Trigger: CTCACGGGAAATTTCTGCCCAGGATCTCAGCCCCAG...TGCTTGGCAGCTGGGGGTGAGGAGACAACAAACCTCGGGAACTGGAGCCAGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR GCA 90 bp GCCCAGGCTGGTCTTAAACTACTGGACTCAAGTGATCTGCCTGTCTTGGCCTCCGGCTCTGGCTCAGCTTaGTCAGGTGGCTCGTCTTCC +
Preference number: 4 (lower is better)
Translates to: AQAGLKLLDSSDLPVLASGSGSA*SGGSSS
Trigger: GGAAGACGAGCCACCTGAGCAAGCTGAGCCAGAGCC...GGAGGCCAAGACAGGCAGATCACTTGAGTCCAGTAGTTTAAGACCAGCCTGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000645184.1
ENST00000648181.1
CDS-3UTR GCA 90 bp AGTGGGCCGAGGACTTCGGTCTGCCGAATCGACAGCTGCTGCTCCATCGAGGCTTTTGAGTTGTGGTGGTaGTGCTTGGGGTCTCAGATG +
Preference number: 4 (lower is better)
Translates to: SGPRTSVCRIDSCCSIEAFELWW*CLGSQM
Trigger: CATCTGAGACCCCAAGCAGCACCACCACAACTCAAA...AGCCTCGATGGAGCAGCAGCTGTCGATTCGGCAGACCGAAGTCCTCGGCCCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643155.1
CDS-3UTR GCA 90 bp AGCTGCTGCTCCATCGAGGCTCCGGGACGCCCGTTTACTTGCTGTACGCTCGAATGGGTGCTGCTCCTTTaGCTCCTTGATGGCTTGTAC +
Preference number: 4 (lower is better)
Translates to: SCCSIEAPGRPFTCCTLEWVLLL*LLDGLY
Trigger: GTACAAGCCATCAAGGAGGCAAAGGAGCAGCACCCA...TTCGAGCGTACAGCAAGTAAACGGGCGTCCCGGAGCCTCGATGGAGCAGCAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643155.1
CDS-3UTR GCA 90 bp CTAGGGAGAGACGCGGAAGTCCCACTAAGCTGGCTTTGGCTTCCAACACAGCTGGTGGATCAGGGCTGGTaGCCTCCCTGGCATTCTGAT +
Preference number: 4 (lower is better)
Translates to: LGRDAEVPLSWLWLPTQLVDQGW*PPWHSD
Trigger: ATCAGAATGCCAGGGAGGGCACCAGCCCTGATCCAC...CAGCTGTGTTGGAAGCCAAAGCCAGCTTAGTGGGACTTCCGCGTCTCTCCCTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp CCCTTGTCATGTGGTGTCTTGTGGGGAGAACGGCTCCTAAAAGTCAATTCCTTGCAGCCCGACGAACAATaGCAGGAGGAGGCGCCGGCG +
Preference number: 4 (lower is better)
Translates to: PLSCGVLWGERLLKVNSLQPDEQ*QEEAPA
Trigger: CGCCGGCGCCTCCTCCTGCCATTGTTCGTCGGGCTG...CAAGGAATTGACTTTTAGGAGCCGTTCTCCCCACAAGACACCACATGACAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000343067.9
CDS-3UTR CCA 90 bp GGTAGCTCTTCCTACAGGCCATCTGGCCATCAGGCAGTGGGCATGCACTACATGGCAATCTCGGTCTCCTaGTGGACGACCACCTTGGTC +
Preference number: 4 (lower is better)
Translates to: GSSSYRPSGHQAVGMHYMAISVS*WTTTLV
Trigger: GACCAAGGTGGTCGTCCACCAGGAGACCGAGATTGC...CATGTAGTGCATGCCCACTGCCTGATGGCCAGATGGCCTGTAGGAAGAGCTACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR CCA 90 bp CTAGGGAGAGACGCGGAAGTCCCACTAAGCTGGCTTTGGCTTCCAACACAGCTGGCAATCTCGGTCTCCTaGTGGACGACCACCTTGGTC +
Preference number: 4 (lower is better)
Translates to: LGRDAEVPLSWLWLPTQLAISVS*WTTTLV
Trigger: GACCAAGGTGGTCGTCCACCAGGAGACCGAGATTGC...CAGCTGTGTTGGAAGCCAAAGCCAGCTTAGTGGGACTTCCGCGTCTCTCCCTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp CTAGGGAGAGACGCGGAAGTCCCACTAAGCTGGCTTTGGCTTCCAACACAGCTGTCTTTCCGAGGTCTGTaGATCAGGGCTGGTGCCCTC +
Preference number: 4 (lower is better)
Translates to: LGRDAEVPLSWLWLPTQLSFRGL*IRAGAL
Trigger: GAGGGCACCAGCCCTGATCCACAGACCTCGGAAAGA...CAGCTGTGTTGGAAGCCAAAGCCAGCTTAGTGGGACTTCCGCGTCTCTCCCTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp CTAGGGAGAGACGCGGAAGTCCCACTAAGCTGGCTTTGGCTTCCAACACAGCTGATTTGCTGGGCGTGGTaGTGTGCGCCTGTCATCCCA +
Preference number: 4 (lower is better)
Translates to: LGRDAEVPLSWLWLPTQLICWAW*CAPVIP
Trigger: TGGGATGACAGGCGCACACCACCACGCCCAGCAAAT...CAGCTGTGTTGGAAGCCAAAGCCAGCTTAGTGGGACTTCCGCGTCTCTCCCTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp GCTCTGGCTCCAGTTCCCGAGGTTTGTTGTCTCCTCACCCCCAGCTGCCAAGCAAAAATTTGCTGGGCGTaGTGGTGTGCGCCTGTCATC +
Preference number: 4 (lower is better)
Translates to: ALAPVPEVCCLLTPSCQAKICWA*WCAPVI
Trigger: GATGACAGGCGCACACCACCACGCCCAGCAAATTTT...TGCTTGGCAGCTGGGGGTGAGGAGACAACAAACCTCGGGAACTGGAGCCAGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR CCA 90 bp GCATCTTTCCGAGGTCTGTGGATCAGGGCTGGTGCCCTCCCTGGCATTCTGATACAACACGACCAGGCTTaGGCACTACCCCAAAGCCCA +
Preference number: 4 (lower is better)
Translates to: ASFRGLWIRAGALPGILIQHDQA*ALPQSP
Trigger: TGGGCTTTGGGGTAGTGCCCAAGCCTGGTCGTGTTG...TATCAGAATGCCAGGGAGGGCACCAGCCCTGATCCACAGACCTCGGAAAGATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp GCTCTGGCTCCAGTTCCCGAGGTTTGTTGTCTCCTCACCCCCAGCTGCCAAGCAAACTGTTGCCAGAGATaGAGGAAAGGGGAAGAGGCC +
Preference number: 4 (lower is better)
Translates to: ALAPVPEVCCLLTPSCQANCCQR*RKGEEA
Trigger: GGCCTCTTCCCCTTTCCTCCATCTCTGGCAACAGTT...TGCTTGGCAGCTGGGGGTGAGGAGACAACAAACCTCGGGAACTGGAGCCAGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR CCA 90 bp GTACGCTCGAAGTGTGGGGCAGGCCTGTCAATTAGAGCACTAGCTTGCCTGGTCCACCACGCCTGGCACTaGACCTCCCCAGCAACTTTA +
Preference number: 4 (lower is better)
Translates to: VRSKCGAGLSIRALACLVHHAWH*TSPATL
Trigger: TAAAGTTGCTGGGGAGGTCCAGTGCCAGGCGTGGTG...GACCAGGCAAGCTAGTGCTCTAATTGACAGGCCTGCCCCACACTTCGAGCGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642643.1
CDS-3UTR CCA 90 bp ATGTTGCCCAGGCTGGTCTTAAACTACTGGACTCAAGTGATCTGCCTGTCTTGGGATGTTGCTCACCGGTaGCTCCGGGGCCGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: MLPRLVLNYWTQVICLSWDVAHR*LRGRAP
Trigger: AGGAGCCCGGCCCCGGAGCCACCGGTGAGCAACATC...CCAAGACAGGCAGATCACTTGAGTCCAGTAGTTTAAGACCAGCCTGGGCAACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648181.1
CDS-3UTR TCA 90 bp CAGCTGACAAGAGTCCTTGGAGGATTTCCCGAAGAATTCCATGGACCCTGTCAGCCGGCTGCTGCTGGCTaGCTGACTAAACGCACCAGC +
Preference number: 4 (lower is better)
Translates to: QLTRVLGGFPEEFHGPCQPAAAG*LTKRTS
Trigger: GCTGGTGCGTTTAGTCAGTCAGCCAGCAGCAGCCGG...CTGACAGGGTCCATGGAATTCTTCGGGAAATCCTCCAAGGACTCTTGTCAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343067.9
CDS-3UTR TCA 90 bp GCTCTGGCTCCAGTTCCCGAGGTTTGTTGTCTCCTCACCCCCAGCTGCCAAGCACTTCTGTTGGTGCTGTaGATTTTCGGCCTCAGTCAC +
Preference number: 4 (lower is better)
Translates to: ALAPVPEVCCLLTPSCQALLLVL*IFGLSH
Trigger: GTGACTGAGGCCGAAAATTCACAGCACCAACAGAAG...TGCTTGGCAGCTGGGGGTGAGGAGACAACAAACCTCGGGAACTGGAGCCAGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR TCA 90 bp GCTGCTCCATCGAGGCTCCGGGACGCCCGTTTACTTGCTGTACGCTCGAAGTGTAGGTTCTTGTTGGCCTaGGTTTATGGCTTCCTCACC +
Preference number: 4 (lower is better)
Translates to: AAPSRLRDARLLAVRSKCRFLLA*VYGFLT
Trigger: GGTGAGGAAGCCATAAACTCAGGCCAACAAGAACCT...ACACTTCGAGCGTACAGCAAGTAAACGGGCGTCCCGGAGCCTCGATGGAGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643155.1
ENST00000648891.1
CDS-3UTR TCA 90 bp CTGACCCTGAGTAATGGCAGGTGCAGAAGTGGGCCGAGGACTTCGGTCTGCCGAAGGTTCTTGTTGGCCTaGGTTTATGGCTTCCTCACC +
Preference number: 4 (lower is better)
Translates to: LTLSNGRCRSGPRTSVCRRFLLA*VYGFLT
Trigger: GGTGAGGAAGCCATAAACTCAGGCCAACAAGAACCT...TCGGCAGACCGAAGTCCTCGGCCCACTTCTGCACCTGCCATTACTCAGGGTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643155.1
ENST00000648891.1
CDS-3UTR TCA 90 bp TCGACAGCTGCTGCTCCATCGAGGCTCCGGGACGCCCGTTTACTTGCTGTACGCAAGTCCTCTGCTTTCTaGTGTCCGCTCCTTGTTCTT +
Preference number: 4 (lower is better)
Translates to: STAAAPSRLRDARLLAVRKSSAF*CPLLVL
Trigger: AAGAACAAGGAGCGGACATCAGAAAGCAGAGGACTT...GCGTACAGCAAGTAAACGGGCGTCCCGGAGCCTCGATGGAGCAGCAGCTGTCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
CDS-3UTR TCA 90 bp GCTCTGGCTCCAGTTCCCGAGGTTTGTTGTCTCCTCACCCCCAGCTGCCAAGCATCTTCCTCGGACACCTaGGATTTGGGCCTTTTGAGA +
Preference number: 4 (lower is better)
Translates to: ALAPVPEVCCLLTPSCQASSSDT*DLGLLR
Trigger: TCTCAAAAGGCCCAAATCTCAGGTGTCCGAGGAAGA...TGCTTGGCAGCTGGGGGTGAGGAGACAACAAACCTCGGGAACTGGAGCCAGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR TCA 90 bp GCTGCTCCATCGAGGCTCCGGGACGCCCGTTTACTTGCTGTACGCTCGAAGTGTTCTTCCTCGGACACCTaGGATTTGGGCCTTTTGAGA +
Preference number: 4 (lower is better)
Translates to: AAPSRLRDARLLAVRSKCSSSDT*DLGLLR
Trigger: TCTCAAAAGGCCCAAATCTCAGGTGTCCGAGGAAGA...ACACTTCGAGCGTACAGCAAGTAAACGGGCGTCCCGGAGCCTCGATGGAGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
CDS-3UTR TCA 90 bp TGGGCCGAGGACTTCGGTCTGCCGAATCGACAGCTGCTGCTCCATCGAGGCTCCTCAAGTTCCTTGGTCTaGTTCGGGGCCAGTTTAAAA +
Preference number: 4 (lower is better)
Translates to: WAEDFGLPNRQLLLHRGSSSSLV*FGASLK
Trigger: TTTTAAACTGGCCCCGAATCAGACCAAGGAACTTGA...GGAGCCTCGATGGAGCAGCAGCTGTCGATTCGGCAGACCGAAGTCCTCGGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
CDS-3UTR TCA 90 bp CTGACCCTGAGTAATGGCAGGTGCAGAAGTGGGCCGAGGACTTCGGTCTGCCGATGTTTGGTCACCATTTaGGGTGGGTACTGTCACCTC +
Preference number: 4 (lower is better)
Translates to: LTLSNGRCRSGPRTSVCRCLVTI*GGYCHL
Trigger: GAGGTGACAGTACCCACCTCAAATGGTGACCAAACA...TCGGCAGACCGAAGTCCTCGGCCCACTTCTGCACCTGCCATTACTCAGGGTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643155.1
ENST00000648891.1
CDS-3UTR TCA 90 bp AGGACTTCGGTCTGCCGAATCGACAGCTGCTGCTCCATCGAGGCTCCGGGACGCCTGGTACAGACTCCATaGAGTTCTTTTTCAGCTCAC +
Preference number: 4 (lower is better)
Translates to: RTSVCRIDSCCSIEAPGRLVQTP*SSFSAH
Trigger: GTGAGCTGAAAAAGAACTTCATGGAGTCTGTACCAG...GCGTCCCGGAGCCTCGATGGAGCAGCAGCTGTCGATTCGGCAGACCGAAGTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
CDS-3UTR TCA 90 bp CTAGGGAGAGACGCGGAAGTCCCACTAAGCTGGCTTTGGCTTCCAACACAGCTGCCCTCCCTGGCATTCTaGTACACTCACATCACTGGC +
Preference number: 4 (lower is better)
Translates to: LGRDAEVPLSWLWLPTQLPSLAF*YTHITG
Trigger: GCCAGTGATGTGAGTGTATCAGAATGCCAGGGAGGG...CAGCTGTGTTGGAAGCCAAAGCCAGCTTAGTGGGACTTCCGCGTCTCTCCCTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp CCCTTGTCATGTGGTGTCTTGTGGGGAGAACGGCTCCTAAAAGTCAATTCCTTGGCCCTTGAGCCCCAGTaGCTGCTGCCCGATACCCAC +
Preference number: 4 (lower is better)
Translates to: PLSCGVLWGERLLKVNSLALEPQ*LLPDTH
Trigger: GTGGGTATCGGGCAGCAGTCACTGGGGCTCAAGGGC...CAAGGAATTGACTTTTAGGAGCCGTTCTCCCCACAAGACACCACATGACAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp GCTCTGGCTCCAGTTCCCGAGGTTTGTTGTCTCCTCACCCCCAGCTGCCAAGCAGGCAGAAATTTCCCGTaGGCATCAAAAGGCGTCAGT +
Preference number: 4 (lower is better)
Translates to: ALAPVPEVCCLLTPSCQAGRNFP*ASKGVS
Trigger: ACTGACGCCTTTTGATGCTCACGGGAAATTTCTGCC...TGCTTGGCAGCTGGGGGTGAGGAGACAACAAACCTCGGGAACTGGAGCCAGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR TCA 90 bp GCTCTGGCTCCAGTTCCCGAGGTTTGTTGTCTCCTCACCCCCAGCTGCCAAGCATCTTCTCTGTTGTCATaGTGTTGCCAGAAGCAGCCG +
Preference number: 4 (lower is better)
Translates to: ALAPVPEVCCLLTPSCQASSLLS*CCQKQP
Trigger: CGGCTGCTTCTGGCAACATCATGACAACAGAGAAGA...TGCTTGGCAGCTGGGGGTGAGGAGACAACAAACCTCGGGAACTGGAGCCAGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373798.5
CDS-3UTR GCA 90 bp GTTGGGAGAAGCAGCTTTAGACATTTCTCTTGCTCACTGCCCTTGAGCCCCAGTTCCTGCGCCCGCCACTaGTGCAGCCCGACGAACAAT +
Preference number: 4 (lower is better)
Translates to: VGRSSFRHFSCSLPLSPSSCARH*CSPTNN
Trigger: ATTGTTCGTCGGGCTGCAGCAGTGGCGGGCGCAGGA...ACTGGGGCTCAAGGGCAGTGAGCAAGAGAAATGTCTAAAGCTGCTTCTCCCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343067.9
CDS-3UTR GCA 90 bp GCTGCTCCATCGAGGCTCCGGGACGCCCGTTTACTTGCTGTACGCTCGAAGTGTGTCGTGAAAGTCCTCTaGTTTCTGATGTCCGCTCCT +
Preference number: 4 (lower is better)
Translates to: AAPSRLRDARLLAVRSKCVVKVL*FLMSAP
Trigger: AGGAGCGGACATCAGAAAGCAGAGGACTTTCACGAC...ACACTTCGAGCGTACAGCAAGTAAACGGGCGTCCCGGAGCCTCGATGGAGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
CDS-3UTR GCA 90 bp GTACGCTCGAAGTGTGGGGCAGGCCTGTCAATTAGAGCACTAGCTTGCCTGGTCACAGGGCAGACGTCCTaGAACTATGTCCTGCCGAAG +
Preference number: 4 (lower is better)
Translates to: VRSKCGAGLSIRALACLVTGQTS*NYVLPK
Trigger: CTTCGGCAGGACATAGTTGCAGGACGTCTGCCCTGT...GACCAGGCAAGCTAGTGCTCTAATTGACAGGCCTGCCCCACACTTCGAGCGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
CDS-3UTR GCA 90 bp GCATCTTTCCGAGGTCTGTGGATCAGGGCTGGTGCCCTCCCTGGCATTCTGATAACAGGGCAGACGTCCTaGAACTATGTCCTGCCGAAG +
Preference number: 4 (lower is better)
Translates to: ASFRGLWIRAGALPGILITGQTS*NYVLPK
Trigger: CTTCGGCAGGACATAGTTGCAGGACGTCTGCCCTGT...TATCAGAATGCCAGGGAGGGCACCAGCCCTGATCCACAGACCTCGGAAAGATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp GCATCTTTCCGAGGTCTGTGGATCAGGGCTGGTGCCCTCCCTGGCATTCTGATAGGACGCCCGTTTACTTaGTGTACGCTCGAAGTGTGG +
Preference number: 4 (lower is better)
Translates to: ASFRGLWIRAGALPGILIGRPFT*CTLEVW
Trigger: CCACACTTCGAGCGTACAGCAAGTAAACGGGCGTCC...TATCAGAATGCCAGGGAGGGCACCAGCCCTGATCCACAGACCTCGGAAAGATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp GTCCATGTTCCCCAGTCTGGTCTTGAATTCCTGAGCTTGAGCGATCGGCCGCCTCTGAGTAATGGCAGGTaGAGAAGTGGGCCGAGGACT +
Preference number: 4 (lower is better)
Translates to: VHVPQSGLEFLSLSDRPPLSNGR*RSGPRT
Trigger: AGTCCTCGGCCCACTTCTGCACCTGCCATTACTCAG...AGGCGGCCGATCGCTCAAGCTCAGGAATTCAAGACCAGACTGGGGAACATGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642643.1
CDS-3UTR GCA 90 bp CTAGGGAGAGACGCGGAAGTCCCACTAAGCTGGCTTTGGCTTCCAACACAGCTGAGCCCCAGTGACTGCTaGCCGATACCCACTGTCTAT +
Preference number: 4 (lower is better)
Translates to: LGRDAEVPLSWLWLPTQLSPSDC*PIPTVY
Trigger: ATAGACAGTGGGTATCGGGCAGCAGTCACTGGGGCT...CAGCTGTGTTGGAAGCCAAAGCCAGCTTAGTGGGACTTCCGCGTCTCTCCCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp GCTCTGGCTCCAGTTCCCGAGGTTTGTTGTCTCCTCACCCCCAGCTGCCAAGCAAACCCCAAGAACTGTTaGCAGAGATGGAGGAAAGGG +
Preference number: 4 (lower is better)
Translates to: ALAPVPEVCCLLTPSCQANPKNC*QRWRKG
Trigger: CCCTTTCCTCCATCTCTGGCAACAGTTCTTGGGGTT...TGCTTGGCAGCTGGGGGTGAGGAGACAACAAACCTCGGGAACTGGAGCCAGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR GCA 90 bp CTAGGGAGAGACGCGGAAGTCCCACTAAGCTGGCTTTGGCTTCCAACACAGCTGTGCTTTGTGGGTGGGTaGCAGAGTCCTCATGTGGCT +
Preference number: 4 (lower is better)
Translates to: LGRDAEVPLSWLWLPTQLCFVGG*QSPHVA
Trigger: AGCCACATGAGGACTCTGGCACCCACCCACAAAGCA...CAGCTGTGTTGGAAGCCAAAGCCAGCTTAGTGGGACTTCCGCGTCTCTCCCTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR CCA 90 bp TCGACAGCTGCTGCTCCATCGAGGCTCCGGGACGCCCGTTTACTTGCTGTACGCCCTGAGCTGGAGTCATaGACCTGTATGACTTATGCA +
Preference number: 4 (lower is better)
Translates to: STAAAPSRLRDARLLAVRPELES*TCMTYA
Trigger: TGCATAAGTCATACAGGTCCATGACTCCAGCTCAGG...GCGTACAGCAAGTAAACGGGCGTCCCGGAGCCTCGATGGAGCAGCAGCTGTCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
CDS-3UTR CCA 90 bp GTACGCTCGAAGTGTGGGGCAGGCCTGTCAATTAGAGCACTAGCTTGCCTGGTCCCTTCCATGCTTCTGTaGGCTCTGGCTCAGCTTGCT +
Preference number: 4 (lower is better)
Translates to: VRSKCGAGLSIRALACLVPSMLL*ALAQLA
Trigger: AGCAAGCTGAGCCAGAGCCCACAGAAGCATGGAAGG...GACCAGGCAAGCTAGTGCTCTAATTGACAGGCCTGCCCCACACTTCGAGCGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
CDS-3UTR CCA 90 bp AGGTGCAGAAGTGGGCCGAGGACTTCGGTCTGCCGAATCGACAGCTGCTGCTCCACTAGGCCGTGGTTCTaGTACAGACTCCATGAAGTT +
Preference number: 4 (lower is better)
Translates to: RCRSGPRTSVCRIDSCCSTRPWF*YRLHEV
Trigger: AACTTCATGGAGTCTGTACCAGAACCACGGCCTAGT...GGAGCAGCAGCTGTCGATTCGGCAGACCGAAGTCCTCGGCCCACTTCTGCACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
CDS-3UTR CCA 90 bp CGAATCGACAGCTGCTGCTCCATCGAGGCTCCGGGACGCCCGTTTACTTGCTGTCCATTCACTAGGCCGTaGTTCTGGTACAGACTCCAT +
Preference number: 4 (lower is better)
Translates to: RIDSCCSIEAPGRPFTCCPFTRP*FWYRLH
Trigger: ATGGAGTCTGTACCAGAACCACGGCCTAGTGAATGG...ACAGCAAGTAAACGGGCGTCCCGGAGCCTCGATGGAGCAGCAGCTGTCGATTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
CDS-3UTR CCA 90 bp GCTGCTCCATCGAGGCTCCGGGACGCCCGTTTACTTGCTGTACGCTCGAAGTGTTGTCAGCAAGACTCCTaGGTCCAAGTCTCCACTGTT +
Preference number: 4 (lower is better)
Translates to: AAPSRLRDARLLAVRSKCCQQDS*VQVSTV
Trigger: AACAGTGGAGACTTGGACCCAGGAGTCTTGCTGACA...ACACTTCGAGCGTACAGCAAGTAAACGGGCGTCCCGGAGCCTCGATGGAGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643155.1
CDS-3UTR CCA 90 bp GCTCTGGCTCCAGTTCCCGAGGTTTGTTGTCTCCTCACCCCCAGCTGCCAAGCATGTCAGCAAGACTCCTaGGTCCAAGTCTCCACTGTT +
Preference number: 4 (lower is better)
Translates to: ALAPVPEVCCLLTPSCQACQQDS*VQVSTV
Trigger: AACAGTGGAGACTTGGACCCAGGAGTCTTGCTGACA...TGCTTGGCAGCTGGGGGTGAGGAGACAACAAACCTCGGGAACTGGAGCCAGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR CCA 90 bp GGTAGCTCTTCCTACAGGCCATCTGGCCATCAGGCAGTGGGCATGCACTACATGTCTTGTCACCACTCCTaGCAACACGACCAGGCTTGG +
Preference number: 4 (lower is better)
Translates to: GSSSYRPSGHQAVGMHYMSCHHS*QHDQAW
Trigger: CCAAGCCTGGTCGTGTTGCCAGGAGTGGTGACAAGA...CATGTAGTGCATGCCCACTGCCTGATGGCCAGATGGCCTGTAGGAAGAGCTACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
3UTR CAA 72 bp CATTTCTTGTCACCACTCCTGGCAACACGACCAGGCTaGGGCACTACCCCAAAGCCCACCTTTCAGACCCTC +
Preference number: 4 (lower is better)
Translates to: HFLSPLLATRPG*GTTPKPTFQTL
Trigger: GAGGGTCTGAAAGGTGGGCTTTGGGGTAGTGCCCAAGCCTGGTCGTGTTGCCAGGAGTGGTGACAAGAAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR TCA 90 bp CAATGCAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACACCGGCTGCTGCTGGCTaGCTGACTAAACGCACCAGC +
Preference number: 4 (lower is better)
Translates to: QCRKAGFGQSIATPLYPTPAAAG*LTKRTS
Trigger: GCTGGTGCGTTTAGTCAGTCAGCCAGCAGCAGCCGG...TGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTGCATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644600.1
ENST00000644780.1
ENST00000650265.1
CDS-3UTR TCA 90 bp GAAGCATGTAGCTGCAGAGACAGTTCTCAGAGGCTAATCATCTACTGGTGGCTCCCGGCTGCTGCTGGCTaGCTGACTAAACGCACCAGC +
Preference number: 4 (lower is better)
Translates to: EACSCRDSSQRLIIYWWLPAAAG*LTKRTS
Trigger: GCTGGTGCGTTTAGTCAGTCAGCCAGCAGCAGCCGG...GAGCCACCAGTAGATGATTAGCCTCTGAGAACTGTCTCTGCAGCTACATGCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648181.1
ENST00000648891.1
CDS-3UTR TCA 90 bp GCAGGTGCAGAAGTGGGCCGAGGACTTCGGTCTGCCGAATCGACAGCTGCTGCTGAGATTTGGGCCTTTTaGGAAACGAGGAGAATAGTC +
Preference number: 4 (lower is better)
Translates to: AGAEVGRGLRSAESTAAAEIWAF*ETRRIV
Trigger: GACTATTCTCCTCGTTTCTCAAAAGGCCCAAATCTC...AGCAGCAGCTGTCGATTCGGCAGACCGAAGTCCTCGGCCCACTTCTGCACCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
CDS-3UTR TCA 90 bp AGGACTTCGGTCTGCCGAATCGACAGCTGCTGCTCCATCGAGGCTCCGGGACGCGCACTGCTTAATGAATaGAGATCCAAAGATGGGTCT +
Preference number: 4 (lower is better)
Translates to: RTSVCRIDSCCSIEAPGRALLNE*RSKDGS
Trigger: AGACCCATCTTTGGATCTTCATTCATTAAGCAGTGC...GCGTCCCGGAGCCTCGATGGAGCAGCAGCTGTCGATTCGGCAGACCGAAGTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
CDS-3UTR TCA 90 bp GCAGGTGCAGAAGTGGGCCGAGGACTTCGGTCTGCCGAATCGACAGCTGCTGCTAGCAGACACCTAGGATaGTATCTACTCCTTCCAAGT +
Preference number: 4 (lower is better)
Translates to: AGAEVGRGLRSAESTAAASRHLG*YLLLPS
Trigger: ACTTGGAAGGAGTAGATATCATCCTAGGTGTCTGCT...AGCAGCAGCTGTCGATTCGGCAGACCGAAGTCCTCGGCCCACTTCTGCACCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
CDS-3UTR TCA 90 bp CTGAGTAATGGCAGGTGCAGAAGTGGGCCGAGGACTTCGGTCTGCCGAATCGACGTTCGGAAGGGTGAGTaGGTGGATAAGCGTTTATCC +
Preference number: 4 (lower is better)
Translates to: LSNGRCRSGPRTSVCRIDVRKGE*VDKRLS
Trigger: GGATAAACGCTTATCCACTCACTCACCCTTCCGAAC...GTCGATTCGGCAGACCGAAGTCCTCGGCCCACTTCTGCACCTGCCATTACTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
CDS-3UTR TCA 90 bp GCATCTTTCCGAGGTCTGTGGATCAGGGCTGGTGCCCTCCCTGGCATTCTGATAGGGCAGCCTCATAAGTaGTGGTCTTGGTCTCAGTGT +
Preference number: 4 (lower is better)
Translates to: ASFRGLWIRAGALPGILIGQPHK*WSWSQC
Trigger: ACACTGAGACCAAGACCATCACTTATGAGGCTGCCC...TATCAGAATGCCAGGGAGGGCACCAGCCCTGATCCACAGACCTCGGAAAGATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp CTAGGGAGAGACGCGGAAGTCCCACTAAGCTGGCTTTGGCTTCCAACACAGCTGGGGCAGCCTCATAAGTaGTGGTCTTGGTCTCAGTGT +
Preference number: 4 (lower is better)
Translates to: LGRDAEVPLSWLWLPTQLGQPHK*WSWSQC
Trigger: ACACTGAGACCAAGACCATCACTTATGAGGCTGCCC...CAGCTGTGTTGGAAGCCAAAGCCAGCTTAGTGGGACTTCCGCGTCTCTCCCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp GCATCTTTCCGAGGTCTGTGGATCAGGGCTGGTGCCCTCCCTGGCATTCTGATAGCTCCTTTGCCTCCTTaGTGGCTTGTACAAGGACCT +
Preference number: 4 (lower is better)
Translates to: ASFRGLWIRAGALPGILIAPLPP*WLVQGP
Trigger: AGGTCCTTGTACAAGCCATCAAGGAGGCAAAGGAGC...TATCAGAATGCCAGGGAGGGCACCAGCCCTGATCCACAGACCTCGGAAAGATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp GGTAGCTCTTCCTACAGGCCATCTGGCCATCAGGCAGTGGGCATGCACTACATGCAAGCCTTCAAAACCTaGCAGACCTCAGCTGGTGAG +
Preference number: 4 (lower is better)
Translates to: GSSSYRPSGHQAVGMHYMQAFKT*QTSAGE
Trigger: CTCACCAGCTGAGGTCTGTCAGGTTTTGAAGGCTTG...CATGTAGTGCATGCCCACTGCCTGATGGCCAGATGGCCTGTAGGAAGAGCTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR TCA 90 bp CTAGGGAGAGACGCGGAAGTCCCACTAAGCTGGCTTTGGCTTCCAACACAGCTGCAAGCCTTCAAAACCTaGCAGACCTCAGCTGGTGAG +
Preference number: 4 (lower is better)
Translates to: LGRDAEVPLSWLWLPTQLQAFKT*QTSAGE
Trigger: CTCACCAGCTGAGGTCTGTCAGGTTTTGAAGGCTTG...CAGCTGTGTTGGAAGCCAAAGCCAGCTTAGTGGGACTTCCGCGTCTCTCCCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp GGGCTCTTTCCCTCCCTCCTGTTGTTCATGTCTCACATGGGTACCAAAAGAAAAGCCCTTGAGCCCCAGTaGCTGCTGCCCGATACCCAC +
Preference number: 4 (lower is better)
Translates to: GLFPSLLLFMSHMGTKRKALEPQ*LLPDTH
Trigger: GTGGGTATCGGGCAGCAGTCACTGGGGCTCAAGGGC...TTTTCTTTTGGTACCCATGTGAGACATGAACAACAGGAGGGAGGGAAAGAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp AAAAATGCACACACCCGAAATGAGTTCAAACCAGCCGAAACAAAACTCAGGCAGTGGGTCACGGGGCCCTaGCGGGTCCCGCAGTTAGGC +
Preference number: 4 (lower is better)
Translates to: KNAHTRNEFKPAETKLRQWVTGP*RVPQLG
Trigger: GCCTAACTGCGGGACCCGTCAGGGCCCCGTGACCCA...CTGCCTGAGTTTTGTTTCGGCTGGTTTGAACTCATTTCGGGTGTGTGCATTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR TCA 90 bp CGAATCGACAGCTGCTGCTCCATCGAGGCTCCGGGACGCCCGTTTACTTGCTGTAATCTGGATCTTCTCTaGGTTCTTCCTGAGCAGGAC +
Preference number: 4 (lower is better)
Translates to: RIDSCCSIEAPGRPFTCCNLDLL*VLPEQD
Trigger: GTCCTGCTCAGGAAGAACTCAGAGAAGATCCAGATT...ACAGCAAGTAAACGGGCGTCCCGGAGCCTCGATGGAGCAGCAGCTGTCGATTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643155.1
CDS-3UTR GCA 90 bp GAAGCTGGAACTGGGATTCTAAGGAGCCTTGAGGCCAATGTGTTTGTGGGAAGCCCGAGGACTTCGGTCTaGCGAATCGACAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: EAGTGILRSLEANVFVGSPRTSV*RIDSCC
Trigger: GCAGCAGCTGTCGATTCGGCAGACCGAAGTCCTCGG...GCTTCCCACAAACACATTGGCCTCAAGGCTCCTTAGAATCCCAGTTCCAGCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp CAGCTGACAAGAGTCCTTGGAGGATTTCCCGAAGAATTCCATGGACCCTGTCAGGGCTCTGGCTCAGCTTaGTCAGGTGGCTCGTCTTCC +
Preference number: 4 (lower is better)
Translates to: QLTRVLGGFPEEFHGPCQGSGSA*SGGSSS
Trigger: GGAAGACGAGCCACCTGAGCAAGCTGAGCCAGAGCC...CTGACAGGGTCCATGGAATTCTTCGGGAAATCCTCCAAGGACTCTTGTCAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp TCCAAAGGGGATAAGACTAGGGAGAGACGCGGAAGTCCCACTAAGCTGGCTTTGCTCAGCAGAGGGCTCTaGCTTACCAAAACCACCCGC +
Preference number: 4 (lower is better)
Translates to: SKGDKTRERRGSPTKLALLSRGL*LTKTTR
Trigger: GCGGGTGGTTTTGGTAAGGCAGAGCCCTCTGCTGAG...CAAAGCCAGCTTAGTGGGACTTCCGCGTCTCTCCCTAGTCTTATCCCCTTTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp GTTGGGAGAAGCAGCTTTAGACATTTCTCTTGCTCACTGCCCTTGAGCCCCAGTCCGAGATCGCGCCACTaGACTCCAGCTTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: VGRSSFRHFSCSLPLSPSPRSRH*TPAWAT
Trigger: TGTTGCCCAAGCTGGAGTGCAGTGGCGCGATCTCGG...ACTGGGGCTCAAGGGCAGTGAGCAAGAGAAATGTCTAAAGCTGCTTCTCCCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp CAGCTGACAAGAGTCCTTGGAGGATTTCCCGAAGAATTCCATGGACCCTGTCAGCCGAGATCGCGCCACTaGACTCCAGCTTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: QLTRVLGGFPEEFHGPCQPRSRH*TPAWAT
Trigger: TGTTGCCCAAGCTGGAGTGCAGTGGCGCGATCTCGG...CTGACAGGGTCCATGGAATTCTTCGGGAAATCCTCCAAGGACTCTTGTCAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp AAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAATACATACTAGGTTCCTGCCACTTTaGCCCGCCGGGGCCTCCACC +
Preference number: 4 (lower is better)
Translates to: KAGFGQSIATPLYPTIHTRFLPL*PAGAST
Trigger: GGTGGAGGCCCCGGCGGGGCAAAGTGGCAGGAACCT...AGTATGTATTGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000644342.1
ENST00000646189.1
ENST00000646800.1
CDS-3UTR GCA 90 bp GAAGCTGGAACTGGGATTCTAAGGAGCCTTGAGGCCAATGTGTTTGTGGGAAGCCCTTTAAGAGGTTCCTaGCACTTTGCCCCGCCGGGG +
Preference number: 4 (lower is better)
Translates to: EAGTGILRSLEANVFVGSPLRGS*HFAPPG
Trigger: CCCCGGCGGGGCAAAGTGGCAGGAACCTCTTAAAGG...GCTTCCCACAAACACATTGGCCTCAAGGCTCCTTAGAATCCCAGTTCCAGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642937.2
ENST00000647103.1
CDS-3UTR CCA 90 bp CAATTGGTCATGTGGACAAAGTACTCACTCCTTCTCCTGTGGGGATTTGCCCATGTCATGATGTTGCGGTaGCTCCGGGGCCGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: QLVMWTKYSLLLLWGFAHVMMLR*LRGRAP
Trigger: AGGAGCCCGGCCCCGGAGCCACCGCAACATCATGAC...ATGGGCAAATCCCCACAGGAGAAGGAGTGAGTACTTTGTCCACATGACCAATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648891.1
CDS-3UTR CCA 90 bp GCCCAGGCTGGTCTTAAACTACTGGACTCAAGTGATCTGCCTGTCTTGGCCTCCCACGCCATGGAGTTCTaGGTCGTAGTCTCCCAGTTC +
Preference number: 4 (lower is better)
Translates to: AQAGLKLLDSSDLPVLASHAMEF*VVVSQF
Trigger: GAACTGGGAGACTACGACCCAGAACTCCATGGCGTG...GGAGGCCAAGACAGGCAGATCACTTGAGTCCAGTAGTTTAAGACCAGCCTGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000645184.1
ENST00000648181.1
CDS-3UTR CCA 90 bp CAGAAGTGGGCCGAGGACTTCGGTCTGCCGAATCGACAGCTGCTGCTCCATCGACCTGAGCTGGAGTCATaGACCTGTATGACTTATGCA +
Preference number: 4 (lower is better)
Translates to: QKWAEDFGLPNRQLLLHRPELES*TCMTYA
Trigger: TGCATAAGTCATACAGGTCCATGACTCCAGCTCAGG...TCGATGGAGCAGCAGCTGTCGATTCGGCAGACCGAAGTCCTCGGCCCACTTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
CDS-3UTR CCA 90 bp CTGAGTAATGGCAGGTGCAGAAGTGGGCCGAGGACTTCGGTCTGCCGAATCGACGGTCACCATTTGAGGTaGGTACTGTCACCTCGATGT +
Preference number: 4 (lower is better)
Translates to: LSNGRCRSGPRTSVCRIDGHHLR*VLSPRC
Trigger: ACATCGAGGTGACAGTACCCACCTCAAATGGTGACC...GTCGATTCGGCAGACCGAAGTCCTCGGCCCACTTCTGCACCTGCCATTACTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643155.1
ENST00000648891.1
CDS-3UTR CCA 90 bp GCTCTGGCTCCAGTTCCCGAGGTTTGTTGTCTCCTCACCCCCAGCTGCCAAGCAGCAAGCTTCTGTGTTTaGTCACCATTTGAGGTGGGT +
Preference number: 4 (lower is better)
Translates to: ALAPVPEVCCLLTPSCQAASFCV*SPFEVG
Trigger: ACCCACCTCAAATGGTGACCAAACACAGAAGCTTGC...TGCTTGGCAGCTGGGGGTGAGGAGACAACAAACCTCGGGAACTGGAGCCAGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
CDS-3UTR CCA 90 bp CTAGGGAGAGACGCGGAAGTCCCACTAAGCTGGCTTTGGCTTCCAACACAGCTGCTGGTTTCTCTTGGATaGGAGAAGGGCAGAGTTGGG +
Preference number: 4 (lower is better)
Translates to: LGRDAEVPLSWLWLPTQLLVSLG*EKGRVG
Trigger: CCCAACTCTGCCCTTCTCCCATCCAAGAGAAACCAG...CAGCTGTGTTGGAAGCCAAAGCCAGCTTAGTGGGACTTCCGCGTCTCTCCCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp GGTAGCTCTTCCTACAGGCCATCTGGCCATCAGGCAGTGGGCATGCACTACATGTTTGGTCTCCTGAGATaGGAGCTAGGGGGAGCACTT +
Preference number: 4 (lower is better)
Translates to: GSSSYRPSGHQAVGMHYMFGLLR*ELGGAL
Trigger: AAGTGCTCCCCCTAGCTCCCATCTCAGGAGACCAAA...CATGTAGTGCATGCCCACTGCCTGATGGCCAGATGGCCTGTAGGAAGAGCTACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR CCA 90 bp GGTAGCTCTTCCTACAGGCCATCTGGCCATCAGGCAGTGGGCATGCACTACATGAAAATTTGCTGGGCGTaGTGGTGTGCGCCTGTCATC +
Preference number: 4 (lower is better)
Translates to: GSSSYRPSGHQAVGMHYMKICWA*WCAPVI
Trigger: GATGACAGGCGCACACCACCACGCCCAGCAAATTTT...CATGTAGTGCATGCCCACTGCCTGATGGCCAGATGGCCTGTAGGAAGAGCTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR CCA 90 bp GCATCTTTCCGAGGTCTGTGGATCAGGGCTGGTGCCCTCCCTGGCATTCTGATAAGGCAGTGGAGACTTTaGACGGTGTTGGGAGAAGCA +
Preference number: 4 (lower is better)
Translates to: ASFRGLWIRAGALPGILIRQWRL*TVLGEA
Trigger: TGCTTCTCCCAACACCGTCCAAAGTCTCCACTGCCT...TATCAGAATGCCAGGGAGGGCACCAGCCCTGATCCACAGACCTCGGAAAGATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp CTAGGGAGAGACGCGGAAGTCCCACTAAGCTGGCTTTGGCTTCCAACACAGCTGGTCTTGCTTTGTGGGTaGGTGCCAGAGTCCTCATGT +
Preference number: 4 (lower is better)
Translates to: LGRDAEVPLSWLWLPTQLVLLCG*VPESSC
Trigger: ACATGAGGACTCTGGCACCCACCCACAAAGCAAGAC...CAGCTGTGTTGGAAGCCAAAGCCAGCTTAGTGGGACTTCCGCGTCTCTCCCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR CCA 90 bp GTTGGGAGAAGCAGCTTTAGACATTTCTCTTGCTCACTGCCCTTGAGCCCCAGTGTCAGGCCGCAGCTCTaGCTCCAGTTCCCGAGGTTT +
Preference number: 4 (lower is better)
Translates to: VGRSSFRHFSCSLPLSPSVRPQL*LQFPRF
Trigger: AAACCTCGGGAACTGGAGCCAGAGCTGCGGCCTGAC...ACTGGGGCTCAAGGGCAGTGAGCAAGAGAAATGTCTAAAGCTGCTTCTCCCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
3UTR CAA 72 bp ACTAGGGAGAGACGCGGAAGTCCCACTAAGCTGGCTTaGGCTTCCAACACAGCTGACAAGAGTCCTTGGAGG +
Preference number: 4 (lower is better)
Translates to: TRERRGSPTKLA*ASNTADKSPWR
Trigger: CCTCCAAGGACTCTTGTCAGCTGTGTTGGAAGCCAAAGCCAGCTTAGTGGGACTTCCGCGTCTCTCCCTAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp CAATGCAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACACTGCTGCTGGCTGACTaGCTAAACGCACCAGCGGAG +
Preference number: 4 (lower is better)
Translates to: QCRKAGFGQSIATPLYPTLLLAD*LNAPAE
Trigger: CTCCGCTGGTGCGTTTAGTCAGTCAGCCAGCAGCAG...TGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTGCATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644600.1
ENST00000644780.1
ENST00000650265.1
CDS-3UTR TCA 90 bp CTCTGGCTCAGCTTGCTCAGGTGGCTCGTCTTCCTTTTTCACTTCAGCCTTCACTCTTCTCTGTTGTCATaGTGTTGCGGTGGCTCCGGG +
Preference number: 4 (lower is better)
Translates to: LWLSLLRWLVFLFHFSLHSSLLS*CCGGSG
Trigger: CCCGGAGCCACCGCAACATCATGACAACAGAGAAGA...GTGAAGGCTGAAGTGAAAAAGGAAGACGAGCCACCTGAGCAAGCTGAGCCAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648891.1
CDS-3UTR TCA 90 bp GTCCATGTTCCCCAGTCTGGTCTTGAATTCCTGAGCTTGAGCGATCGGCCGCCTTCTTCCTCGGACACCTaGGATTTGGGCCTTTTGAGA +
Preference number: 4 (lower is better)
Translates to: VHVPQSGLEFLSLSDRPPSSSDT*DLGLLR
Trigger: TCTCAAAAGGCCCAAATCTCAGGTGTCCGAGGAAGA...AGGCGGCCGATCGCTCAAGCTCAGGAATTCAAGACCAGACTGGGGAACATGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642643.1
CDS-3UTR TCA 90 bp GGTAGCTCTTCCTACAGGCCATCTGGCCATCAGGCAGTGGGCATGCACTACATGAAGATGGGTCTGTTTTaGGTTCCGGTTCAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: GSSSYRPSGHQAVGMHYMKMGLF*VPVQEL
Trigger: CAGCTCCTGAACCGGAACTCAAAACAGACCCATCTT...CATGTAGTGCATGCCCACTGCCTGATGGCCAGATGGCCTGTAGGAAGAGCTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR TCA 90 bp GCTGCTCCATCGAGGCTCCGGGACGCCCGTTTACTTGCTGTACGCTCGAAGTGTTCAAGTTCCTTGGTCTaGTTCGGGGCCAGTTTAAAA +
Preference number: 4 (lower is better)
Translates to: AAPSRLRDARLLAVRSKCSSSLV*FGASLK
Trigger: TTTTAAACTGGCCCCGAATCAGACCAAGGAACTTGA...ACACTTCGAGCGTACAGCAAGTAAACGGGCGTCCCGGAGCCTCGATGGAGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
CDS-3UTR TCA 90 bp TCGACAGCTGCTGCTCCATCGAGGCTCCGGGACGCCCGTTTACTTGCTGTACGCACTTATGCAGTTCCATaGCCTTCTCTTCAAGTTCCT +
Preference number: 4 (lower is better)
Translates to: STAAAPSRLRDARLLAVRTYAVP*PSLQVP
Trigger: AGGAACTTGAAGAGAAGGTCATGGAACTGCATAAGT...GCGTACAGCAAGTAAACGGGCGTCCCGGAGCCTCGATGGAGCAGCAGCTGTCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
CDS-3UTR TCA 90 bp GCAGGTGCAGAAGTGGGCCGAGGACTTCGGTCTGCCGAATCGACAGCTGCTGCTGGTAACTGGGAAGTTTaGATCCGATGGTACTTTCAT +
Preference number: 4 (lower is better)
Translates to: AGAEVGRGLRSAESTAAAGNWEV*IRWYFH
Trigger: ATGAAAGTACCATCGGATTCAAACTTCCCAGTTACC...AGCAGCAGCTGTCGATTCGGCAGACCGAAGTCCTCGGCCCACTTCTGCACCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
CDS-3UTR TCA 90 bp CTGACCCTGAGTAATGGCAGGTGCAGAAGTGGGCCGAGGACTTCGGTCTGCCGATCAGATGTGATAGTTTaGGCTGTCAGCAAGACTCCT +
Preference number: 4 (lower is better)
Translates to: LTLSNGRCRSGPRTSVCRSDVIV*AVSKTP
Trigger: AGGAGTCTTGCTGACAGCTCAAACTATCACATCTGA...TCGGCAGACCGAAGTCCTCGGCCCACTTCTGCACCTGCCATTACTCAGGGTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643155.1
CDS-3UTR TCA 90 bp TGGGCCGAGGACTTCGGTCTGCCGAATCGACAGCTGCTGCTCCATCGAGGCTCCATAATCTTGAAAGTCTaGAGTCTGACTATGGCAGGT +
Preference number: 4 (lower is better)
Translates to: WAEDFGLPNRQLLLHRGSIILKV*SLTMAG
Trigger: ACCTGCCATAGTCAGACTTCAGACTTTCAAGATTAT...GGAGCCTCGATGGAGCAGCAGCTGTCGATTCGGCAGACCGAAGTCCTCGGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643155.1
CDS-3UTR TCA 90 bp GAAGCTGGAACTGGGATTCTAAGGAGCCTTGAGGCCAATGTGTTTGTGGGAAGCGCAGAGAGGCTAGGCTaGAGGGGTTACAAACCACCC +
Preference number: 4 (lower is better)
Translates to: EAGTGILRSLEANVFVGSAERLG*RGYKPP
Trigger: GGGTGGTTTGTAACCCCTTCAGCCTAGCCTCTCTGC...GCTTCCCACAAACACATTGGCCTCAAGGCTCCTTAGAATCCCAGTTCCAGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp GTTGGGAGAAGCAGCTTTAGACATTTCTCTTGCTCACTGCCCTTGAGCCCCAGTGCAGAGAGGCTAGGCTaGAGGGGTTACAAACCACCC +
Preference number: 4 (lower is better)
Translates to: VGRSSFRHFSCSLPLSPSAERLG*RGYKPP
Trigger: GGGTGGTTTGTAACCCCTTCAGCCTAGCCTCTCTGC...ACTGGGGCTCAAGGGCAGTGAGCAAGAGAAATGTCTAAAGCTGCTTCTCCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp GTTGGGAGAAGCAGCTTTAGACATTTCTCTTGCTCACTGCCCTTGAGCCCCAGTACAGACCTCAGCTGGTaGGTGGGAATGAGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: VGRSSFRHFSCSLPLSPSTDLSW*VGMSRA
Trigger: AGCCCTGCTCATTCCCACTCACCAGCTGAGGTCTGT...ACTGGGGCTCAAGGGCAGTGAGCAAGAGAAATGTCTAAAGCTGCTTCTCCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp GTTGGGAGAAGCAGCTTTAGACATTTCTCTTGCTCACTGCCCTTGAGCCCCAGTGGCAAGAGAACTGCTTaGACCCAGGAGGCGGAGGTT +
Preference number: 4 (lower is better)
Translates to: VGRSSFRHFSCSLPLSPSGKRTA*TQEAEV
Trigger: AACCTCCGCCTCCTGGGTTCAAGCAGTTCTCTTGCC...ACTGGGGCTCAAGGGCAGTGAGCAAGAGAAATGTCTAAAGCTGCTTCTCCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp CAGCTGACAAGAGTCCTTGGAGGATTTCCCGAAGAATTCCATGGACCCTGTCAGGGCAAGAGAACTGCTTaGACCCAGGAGGCGGAGGTT +
Preference number: 4 (lower is better)
Translates to: QLTRVLGGFPEEFHGPCQGKRTA*TQEAEV
Trigger: AACCTCCGCCTCCTGGGTTCAAGCAGTTCTCTTGCC...CTGACAGGGTCCATGGAATTCTTCGGGAAATCCTCCAAGGACTCTTGTCAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp GAAGCTGGAACTGGGATTCTAAGGAGCCTTGAGGCCAATGTGTTTGTGGGAAGCCGTTTAGGCCCCCGATaGACGGTCCTGTGCTGTGAA +
Preference number: 4 (lower is better)
Translates to: EAGTGILRSLEANVFVGSRLGPR*TVLCCE
Trigger: TTCACAGCACAGGACCGTTCATCGGGGGCCTAAACG...GCTTCCCACAAACACATTGGCCTCAAGGCTCCTTAGAATCCCAGTTCCAGCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR TCA 90 bp CAGCTGACAAGAGTCCTTGGAGGATTTCCCGAAGAATTCCATGGACCCTGTCAGCGTTTAGGCCCCCGATaGACGGTCCTGTGCTGTGAA +
Preference number: 4 (lower is better)
Translates to: QLTRVLGGFPEEFHGPCQRLGPR*TVLCCE
Trigger: TTCACAGCACAGGACCGTTCATCGGGGGCCTAAACG...CTGACAGGGTCCATGGAATTCTTCGGGAAATCCTCCAAGGACTCTTGTCAGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR TCA 90 bp GGTAGCTCTTCCTACAGGCCATCTGGCCATCAGGCAGTGGGCATGCACTACATGAAGATTCTGCCAATCTaGTTCTGCTGCCCGAGTTCC +
Preference number: 4 (lower is better)
Translates to: GSSSYRPSGHQAVGMHYMKILPI*FCCPSS
Trigger: GGAACTCGGGCAGCAGAATCAGATTGGCAGAATCTT...CATGTAGTGCATGCCCACTGCCTGATGGCCAGATGGCCTGTAGGAAGAGCTACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR TCA 90 bp CAATGCAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAAGGCAGAGGTTGCAGTaGGCTGAGATCGCGCCACTG +
Preference number: 4 (lower is better)
Translates to: QCRKAGFGQSIATPLYPTRQRLQ*AEIAPL
Trigger: CAGTGGCGCGATCTCAGCTCACTGCAACCTCTGCCT...TGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTGCATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR GCA 90 bp CAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAATACATCCTGCGCCCGCCACTaGTGCAGCCCGACGAACAAT +
Preference number: 4 (lower is better)
Translates to: QKSWLWAVHCYSFVPHNTSCARH*CSPTNN
Trigger: ATTGTTCGTCGGGCTGCAGCAGTGGCGGGCGCAGGA...TGTATTGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644600.1
ENST00000644780.1
ENST00000650265.1
CDS-3UTR GCA 90 bp AGCTGCTGCTCCATCGAGGCTCCGGGACGCCCGTTTACTTGCTGTACGCTCGAATCTTCCTTCTGTTGGTaGTGTGAATTTTCGGCCTCA +
Preference number: 4 (lower is better)
Translates to: SCCSIEAPGRPFTCCTLESSFCW*CEFSAS
Trigger: TGAGGCCGAAAATTCACAGCACCAACAGAAGGAAGA...TTCGAGCGTACAGCAAGTAAACGGGCGTCCCGGAGCCTCGATGGAGCAGCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643155.1
ENST00000648891.1
CDS-3UTR GCA 90 bp GTACGCTCGAAGTGTGGGGCAGGCCTGTCAATTAGAGCACTAGCTTGCCTGGTCGTCGTGAAAGTCCTCTaGTTTCTGATGTCCGCTCCT +
Preference number: 4 (lower is better)
Translates to: VRSKCGAGLSIRALACLVVVKVL*FLMSAP
Trigger: AGGAGCGGACATCAGAAAGCAGAGGACTTTCACGAC...GACCAGGCAAGCTAGTGCTCTAATTGACAGGCCTGCCCCACACTTCGAGCGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
CDS-3UTR GCA 90 bp TGGGCCGAGGACTTCGGTCTGCCGAATCGACAGCTGCTGCTCCATCGAGGCTCCGCTGTGTTTCTGCACTaGTTAATGAATGAAGATCCA +
Preference number: 4 (lower is better)
Translates to: WAEDFGLPNRQLLLHRGSAVFLH*LMNEDP
Trigger: TGGATCTTCATTCATTAAGCAGTGCAGAAACACAGC...GGAGCCTCGATGGAGCAGCAGCTGTCGATTCGGCAGACCGAAGTCCTCGGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
CDS-3UTR GCA 90 bp TCGACAGCTGCTGCTCCATCGAGGCTCCGGGACGCCCGTTTACTTGCTGTACGCCCAACAAAGAAACCTTaGAGTGCATGTTCCTGTGTT +
Preference number: 4 (lower is better)
Translates to: STAAAPSRLRDARLLAVRPTKKP*SACSCV
Trigger: AACACAGGAACATGCACTGCAAGGTTTCTTTGTTGG...GCGTACAGCAAGTAAACGGGCGTCCCGGAGCCTCGATGGAGCAGCAGCTGTCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
CDS-3UTR GCA 90 bp CAATGCAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACACCGAGGACTTCGGTCTaGCGAATCGACAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: QCRKAGFGQSIATPLYPTPRTSV*RIDSCC
Trigger: GCAGCAGCTGTCGATTCGGCAGACCGAAGTCCTCGG...TGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTGCATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR GCA 90 bp ATGTTGCCCAGGCTGGTCTTAAACTACTGGACTCAAGTGATCTGCCTGTCTTGGGGCTCTGGCTCAGCTTaGTCAGGTGGCTCGTCTTCC +
Preference number: 4 (lower is better)
Translates to: MLPRLVLNYWTQVICLSWGSGSA*SGGSSS
Trigger: GGAAGACGAGCCACCTGAGCAAGCTGAGCCAGAGCC...CCAAGACAGGCAGATCACTTGAGTCCAGTAGTTTAAGACCAGCCTGGGCAACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000645184.1
ENST00000648181.1
CDS-3UTR GCA 90 bp CAATGCAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAGGCTCTGGCTCAGCTTaGTCAGGTGGCTCGTCTTCC +
Preference number: 4 (lower is better)
Translates to: QCRKAGFGQSIATPLYPTGSGSA*SGGSSS
Trigger: GGAAGACGAGCCACCTGAGCAAGCTGAGCCAGAGCC...TGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTGCATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR GCA 90 bp CTAGGGAGAGACGCGGAAGTCCCACTAAGCTGGCTTTGGCTTCCAACACAGCTGTTTTTCCACCTTCCATaGTTCTGTGGGCTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: LGRDAEVPLSWLWLPTQLFFHLP*FCGLWL
Trigger: GAGCCAGAGCCCACAGAAGCATGGAAGGTGGAAAAA...CAGCTGTGTTGGAAGCCAAAGCCAGCTTAGTGGGACTTCCGCGTCTCTCCCTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
CDS-3UTR GCA 90 bp GTTGGGAGAAGCAGCTTTAGACATTTCTCTTGCTCACTGCCCTTGAGCCCCAGTGTGGATCAGGGCTGGTaGCCTCCCTGGCATTCTGAT +
Preference number: 4 (lower is better)
Translates to: VGRSSFRHFSCSLPLSPSVDQGW*PPWHSD
Trigger: ATCAGAATGCCAGGGAGGGCACCAGCCCTGATCCAC...ACTGGGGCTCAAGGGCAGTGAGCAAGAGAAATGTCTAAAGCTGCTTCTCCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp TCCAAAGGGGATAAGACTAGGGAGAGACGCGGAAGTCCCACTAAGCTGGCTTTGAGCCCCAGTGACTGCTaGCCGATACCCACTGTCTAT +
Preference number: 4 (lower is better)
Translates to: SKGDKTRERRGSPTKLALSPSDC*PIPTVY
Trigger: ATAGACAGTGGGTATCGGGCAGCAGTCACTGGGGCT...CAAAGCCAGCTTAGTGGGACTTCCGCGTCTCTCCCTAGTCTTATCCCCTTTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp CCAACACAGCTGACAAGAGTCCTTGGAGGATTTCCCGAAGAATTCCATGGACCCTTGAGCCCCAGTGACTaGTGCCCGATACCCACTGTC +
Preference number: 4 (lower is better)
Translates to: PTQLTRVLGGFPEEFHGPLSPSD*CPIPTV
Trigger: GACAGTGGGTATCGGGCAGCAGTCACTGGGGCTCAA...GGGTCCATGGAATTCTTCGGGAAATCCTCCAAGGACTCTTGTCAGCTGTGTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp CAGCTGACAAGAGTCCTTGGAGGATTTCCCGAAGAATTCCATGGACCCTGTCAGTTGAGCCCCAGTGACTaGTGCCCGATACCCACTGTC +
Preference number: 4 (lower is better)
Translates to: QLTRVLGGFPEEFHGPCQLSPSD*CPIPTV
Trigger: GACAGTGGGTATCGGGCAGCAGTCACTGGGGCTCAA...CTGACAGGGTCCATGGAATTCTTCGGGAAATCCTCCAAGGACTCTTGTCAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp TCCAAAGGGGATAAGACTAGGGAGAGACGCGGAAGTCCCACTAAGCTGGCTTTGTGCTTTGTGGGTGGGTaGCAGAGTCCTCATGTGGCT +
Preference number: 4 (lower is better)
Translates to: SKGDKTRERRGSPTKLALCFVGG*QSPHVA
Trigger: AGCCACATGAGGACTCTGGCACCCACCCACAAAGCA...CAAAGCCAGCTTAGTGGGACTTCCGCGTCTCTCCCTAGTCTTATCCCCTTTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR GCA 90 bp CAGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAGAAGTTCAATGAGGTTCCTGCCACTTTaGCCCGCCGGGGCCTCCACC +
Preference number: 4 (lower is better)
Translates to: QRASYSNNTVEAKDRSSMRFLPL*PAGAST
Trigger: GGTGGAGGCCCCGGCGGGGCAAAGTGGCAGGAACCT...CATTGAACTTCTGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000644342.1
ENST00000646189.1
ENST00000646800.1
CDS-3UTR GCA 90 bp GTCCATGTTCCCCAGTCTGGTCTTGAATTCCTGAGCTTGAGCGATCGGCCGCCTCCAGAAGCATGTAGCTaGAGAGACAGTTCTCAGAGG +
Preference number: 4 (lower is better)
Translates to: VHVPQSGLEFLSLSDRPPPEACS*RDSSQR
Trigger: CCTCTGAGAACTGTCTCTGCAGCTACATGCTTCTGG...AGGCGGCCGATCGCTCAAGCTCAGGAATTCAAGACCAGACTGGGGAACATGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642643.1
CDS-3UTR CCA 90 bp AGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAGAAGTTCAATGGCAGCCCGACGAACAATaGCAGGAGGAGGCGCCGGCG +
Preference number: 4 (lower is better)
Translates to: RGHHTAITQLKPRTEVQWQPDEQ*QEEAPA
Trigger: CGCCGGCGCCTCCTCCTGCCATTGTTCGTCGGGCTG...CCATTGAACTTCTGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644600.1
ENST00000644780.1
ENST00000650265.1
CDS-3UTR CCA 90 bp GCCACATTCCTTGTCATTTGGGATGAAAGAAAGGCCCAGGATCAGACAGAAGTAGTCATGATGTTGCGGTaGCTCCGGGGCCGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: ATFLVIWDERKAQDQTEVVMMLR*LRGRAP
Trigger: AGGAGCCCGGCCCCGGAGCCACCGCAACATCATGAC...TACTTCTGTCTGATCCTGGGCCTTTCTTTCATCCCAAATGACAAGGAATGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343067.9
CDS-3UTR CCA 90 bp CAGAGACAGTTCTCAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTCCTATGTCATGATGTTGCGGTaGCTCCGGGGCCGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: QRQFSEANHLLVAPNSSYVMMLR*LRGRAP
Trigger: AGGAGCCCGGCCCCGGAGCCACCGCAACATCATGAC...ATAGGAGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTGAGAACTGTCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000645184.1
ENST00000648891.1
CDS-3UTR CCA 90 bp CTAGGGAGAGACGCGGAAGTCCCACTAAGCTGGCTTTGGCTTCCAACACAGCTGCTCAGCTTGCTCAGGTaGCTCGTCTTCCTTTTTCAC +
Preference number: 4 (lower is better)
Translates to: LGRDAEVPLSWLWLPTQLLSLLR*LVFLFH
Trigger: GTGAAAAAGGAAGACGAGCCACCTGAGCAAGCTGAG...CAGCTGTGTTGGAAGCCAAAGCCAGCTTAGTGGGACTTCCGCGTCTCTCCCTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp GGTAGCTCTTCCTACAGGCCATCTGGCCATCAGGCAGTGGGCATGCACTACATGGGTCACCATTTGAGGTaGGTACTGTCACCTCGATGT +
Preference number: 4 (lower is better)
Translates to: GSSSYRPSGHQAVGMHYMGHHLR*VLSPRC
Trigger: ACATCGAGGTGACAGTACCCACCTCAAATGGTGACC...CATGTAGTGCATGCCCACTGCCTGATGGCCAGATGGCCTGTAGGAAGAGCTACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
CDS-3UTR CCA 90 bp GTACGCTCGAAGTGTGGGGCAGGCCTGTCAATTAGAGCACTAGCTTGCCTGGTCGGTCACCATTTGAGGTaGGTACTGTCACCTCGATGT +
Preference number: 4 (lower is better)
Translates to: VRSKCGAGLSIRALACLVGHHLR*VLSPRC
Trigger: ACATCGAGGTGACAGTACCCACCTCAAATGGTGACC...GACCAGGCAAGCTAGTGCTCTAATTGACAGGCCTGCCCCACACTTCGAGCGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643155.1
ENST00000648891.1
CDS-3UTR CCA 90 bp GCATCTTTCCGAGGTCTGTGGATCAGGGCTGGTGCCCTCCCTGGCATTCTGATACCATTCACTAGGCCGTaGTTCTGGTACAGACTCCAT +
Preference number: 4 (lower is better)
Translates to: ASFRGLWIRAGALPGILIPFTRP*FWYRLH
Trigger: ATGGAGTCTGTACCAGAACCACGGCCTAGTGAATGG...TATCAGAATGCCAGGGAGGGCACCAGCCCTGATCCACAGACCTCGGAAAGATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR CCA 90 bp TCCAAAGGGGATAAGACTAGGGAGAGACGCGGAAGTCCCACTAAGCTGGCTTTGATCTCGGTCTCCTGGTaGACGACCACCTTGGTCACT +
Preference number: 4 (lower is better)
Translates to: SKGDKTRERRGSPTKLALISVSW*TTTLVT
Trigger: AGTGACCAAGGTGGTCGTCCACCAGGAGACCGAGAT...CAAAGCCAGCTTAGTGGGACTTCCGCGTCTCTCCCTAGTCTTATCCCCTTTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp GGTAGCTCTTCCTACAGGCCATCTGGCCATCAGGCAGTGGGCATGCACTACATGCCACTAAGCTGGCTTTaGCTTCCAACACAGCTGACA +
Preference number: 4 (lower is better)
Translates to: GSSSYRPSGHQAVGMHYMPLSWL*LPTQLT
Trigger: TGTCAGCTGTGTTGGAAGCCAAAGCCAGCTTAGTGG...CATGTAGTGCATGCCCACTGCCTGATGGCCAGATGGCCTGTAGGAAGAGCTACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR CCA 90 bp TCCAAAGGGGATAAGACTAGGGAGAGACGCGGAAGTCCCACTAAGCTGGCTTTGGGCTGGTGCCCTCCCTaGCATTCTGATACACTCACA +
Preference number: 4 (lower is better)
Translates to: SKGDKTRERRGSPTKLALGWCPP*HSDTLT
Trigger: TGTGAGTGTATCAGAATGCCAGGGAGGGCACCAGCC...CAAAGCCAGCTTAGTGGGACTTCCGCGTCTCTCCCTAGTCTTATCCCCTTTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp GTTGGGAGAAGCAGCTTTAGACATTTCTCTTGCTCACTGCCCTTGAGCCCCAGTTCTGTGGATCAGGGCTaGTGCCCTCCCTGGCATTCT +
Preference number: 4 (lower is better)
Translates to: VGRSSFRHFSCSLPLSPSSVDQG*CPPWHS
Trigger: AGAATGCCAGGGAGGGCACCAGCCCTGATCCACAGA...ACTGGGGCTCAAGGGCAGTGAGCAAGAGAAATGTCTAAAGCTGCTTCTCCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp CCAACACAGCTGACAAGAGTCCTTGGAGGATTTCCCGAAGAATTCCATGGACCCTCTGTGGATCAGGGCTaGTGCCCTCCCTGGCATTCT +
Preference number: 4 (lower is better)
Translates to: PTQLTRVLGGFPEEFHGPSVDQG*CPPWHS
Trigger: AGAATGCCAGGGAGGGCACCAGCCCTGATCCACAGA...GGGTCCATGGAATTCTTCGGGAAATCCTCCAAGGACTCTTGTCAGCTGTGTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp GCTCTGGCTCCAGTTCCCGAGGTTTGTTGTCTCCTCACCCCCAGCTGCCAAGCAAGGCCAATGTGTTTGTaGGAAGCAGTTGGAAGGTTA +
Preference number: 4 (lower is better)
Translates to: ALAPVPEVCCLLTPSCQARPMCL*EAVGRL
Trigger: TAACCTTCCAACTGCTTCCCACAAACACATTGGCCT...TGCTTGGCAGCTGGGGGTGAGGAGACAACAAACCTCGGGAACTGGAGCCAGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR CCA 90 bp GAAGCTGGAACTGGGATTCTAAGGAGCCTTGAGGCCAATGTGTTTGTGGGAAGCCAACACGACCAGGCTTaGGCACTACCCCAAAGCCCA +
Preference number: 4 (lower is better)
Translates to: EAGTGILRSLEANVFVGSQHDQA*ALPQSP
Trigger: TGGGCTTTGGGGTAGTGCCCAAGCCTGGTCGTGTTG...GCTTCCCACAAACACATTGGCCTCAAGGCTCCTTAGAATCCCAGTTCCAGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR CAA 72 bp GGGAAGAGGCCTGGAAGGACACCCATCTTGCTGGGCTaGTCCAAATCTATGGCTTCTAAGAGCCTGAAAGGC +
Preference number: 4 (lower is better)
Translates to: GKRPGRTPILLG*SKSMASKSLKG
Trigger: GCCTTTCAGGCTCTTAGAAGCCATAGATTTGGACAAGCCCAGCAAGATGGGTGTCCTTCCAGGCCTCTTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
3UTR CAA 72 bp TTCCACCTTCCATGCTTCTGTGGGCTCTGGCTCAGCTaGCTCAGGTGGCTCGTCTTCCTTTTTCACTTCAGC +
Preference number: 4 (lower is better)
Translates to: FHLPCFCGLWLS*LRWLVFLFHFS
Trigger: GCTGAAGTGAAAAAGGAAGACGAGCCACCTGAGCAAGCTGAGCCAGAGCCCACAGAAGCATGGAAGGTGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000643155.1
ENST00000648891.1
3UTR CAA 72 bp TGTGGTGGTGCTGCTTGGGGTCTCAGATGTGATAGTTaGAGCTGTCAGCAAGACTCCTGGGTCCAAGTCTCC +
Preference number: 4 (lower is better)
Translates to: CGGAAWGLRCDS*SCQQDSWVQVS
Trigger: GGAGACTTGGACCCAGGAGTCTTGCTGACAGCTCAAACTATCACATCTGAGACCCCAAGCAGCACCACCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643155.1
CDS-3UTR TCA 90 bp GCCCAGGCTGGTCTTAAACTACTGGACTCAAGTGATCTGCCTGTCTTGGCCTCCAGGTTCTTGTTGGCCTaGGTTTATGGCTTCCTCACC +
Preference number: 4 (lower is better)
Translates to: AQAGLKLLDSSDLPVLASRFLLA*VYGFLT
Trigger: GGTGAGGAAGCCATAAACTCAGGCCAACAAGAACCT...GGAGGCCAAGACAGGCAGATCACTTGAGTCCAGTAGTTTAAGACCAGCCTGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000645184.1
ENST00000648181.1
CDS-3UTR TCA 90 bp TCCAAAGGGGATAAGACTAGGGAGAGACGCGGAAGTCCCACTAAGCTGGCTTTGCAAGATTCCTCCTGCTaGGGTTCTTGTTGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: SKGDKTRERRGSPTKLALQDSSC*GSCWPE
Trigger: CTCAGGCCAACAAGAACCTCAGCAGGAGGAATCTTG...CAAAGCCAGCTTAGTGGGACTTCCGCGTCTCTCCCTAGTCTTATCCCCTTTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp CTAGGGAGAGACGCGGAAGTCCCACTAAGCTGGCTTTGGCTTCCAACACAGCTGAAGTCCTCTGCTTTCTaGTGTCCGCTCCTTGTTCTT +
Preference number: 4 (lower is better)
Translates to: LGRDAEVPLSWLWLPTQLKSSAF*CPLLVL
Trigger: AAGAACAAGGAGCGGACATCAGAAAGCAGAGGACTT...CAGCTGTGTTGGAAGCCAAAGCCAGCTTAGTGGGACTTCCGCGTCTCTCCCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp GCATCTTTCCGAGGTCTGTGGATCAGGGCTGGTGCCCTCCCTGGCATTCTGATAAATCTGGATCTTCTCTaGGTTCTTCCTGAGCAGGCT +
Preference number: 4 (lower is better)
Translates to: ASFRGLWIRAGALPGILINLDLL*VLPEQA
Trigger: AGCCTGCTCAGGAAGAACTCAGAGAAGATCCAGATT...TATCAGAATGCCAGGGAGGGCACCAGCCCTGATCCACAGACCTCGGAAAGATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp GCTGCTCCATCGAGGCTCCGGGACGCCCGTTTACTTGCTGTACGCTCGAAGTGTACTTATGCAGTTCCATaGCCTTCTCTTCAAGTTCCT +
Preference number: 4 (lower is better)
Translates to: AAPSRLRDARLLAVRSKCTYAVP*PSLQVP
Trigger: AGGAACTTGAAGAGAAGGTCATGGAACTGCATAAGT...ACACTTCGAGCGTACAGCAAGTAAACGGGCGTCCCGGAGCCTCGATGGAGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
CDS-3UTR TCA 90 bp CGAATCGACAGCTGCTGCTCCATCGAGGCTCCGGGACGCCCGTTTACTTGCTGTACTTATGCAGTTCCATaGCCTTCTCTTCAAGTTCCT +
Preference number: 4 (lower is better)
Translates to: RIDSCCSIEAPGRPFTCCTYAVP*PSLQVP
Trigger: AGGAACTTGAAGAGAAGGTCATGGAACTGCATAAGT...ACAGCAAGTAAACGGGCGTCCCGGAGCCTCGATGGAGCAGCAGCTGTCGATTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
CDS-3UTR TCA 90 bp CCAACACAGCTGACAAGAGTCCTTGGAGGATTTCCCGAAGAATTCCATGGACCCAACTCCAAGTCAGCCTaGGCTGGAGTCATGGACCTG +
Preference number: 4 (lower is better)
Translates to: PTQLTRVLGGFPEEFHGPNSKSA*AGVMDL
Trigger: CAGGTCCATGACTCCAGCTCAGGCTGACTTGGAGTT...GGGTCCATGGAATTCTTCGGGAAATCCTCCAAGGACTCTTGTCAGCTGTGTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp GCTCTGGCTCCAGTTCCCGAGGTTTGTTGTCTCCTCACCCCCAGCTGCCAAGCAGGTAACTGGGAAGTTTaGATCCGATGGTACTTTCAT +
Preference number: 4 (lower is better)
Translates to: ALAPVPEVCCLLTPSCQAGNWEV*IRWYFH
Trigger: ATGAAAGTACCATCGGATTCAAACTTCCCAGTTACC...TGCTTGGCAGCTGGGGGTGAGGAGACAACAAACCTCGGGAACTGGAGCCAGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR TCA 90 bp GCTGCTCCATCGAGGCTCCGGGACGCCCGTTTACTTGCTGTACGCTCGAAGTGTGGTAACTGGGAAGTTTaGATCCGATGGTACTTTCAT +
Preference number: 4 (lower is better)
Translates to: AAPSRLRDARLLAVRSKCGNWEV*IRWYFH
Trigger: ATGAAAGTACCATCGGATTCAAACTTCCCAGTTACC...ACACTTCGAGCGTACAGCAAGTAAACGGGCGTCCCGGAGCCTCGATGGAGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
CDS-3UTR TCA 90 bp AGGACTTCGGTCTGCCGAATCGACAGCTGCTGCTCCATCGAGGCTCCGGGACGCAATCTGAAAAACGTGTaGTGTTCTACACAGACTTTC +
Preference number: 4 (lower is better)
Translates to: RTSVCRIDSCCSIEAPGRNLKNV*CSTQTF
Trigger: GAAAGTCTGTGTAGAACATCACACGTTTTTCAGATT...GCGTCCCGGAGCCTCGATGGAGCAGCAGCTGTCGATTCGGCAGACCGAAGTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
CDS-3UTR TCA 90 bp CTGAGTAATGGCAGGTGCAGAAGTGGGCCGAGGACTTCGGTCTGCCGAATCGACCTGGTACAGACTCCATaGAGTTCTTTTTCAGCTCAC +
Preference number: 4 (lower is better)
Translates to: LSNGRCRSGPRTSVCRIDLVQTP*SSFSAH
Trigger: GTGAGCTGAAAAAGAACTTCATGGAGTCTGTACCAG...GTCGATTCGGCAGACCGAAGTCCTCGGCCCACTTCTGCACCTGCCATTACTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
CDS-3UTR TCA 90 bp GCTCTGGCTCCAGTTCCCGAGGTTTGTTGTCTCCTCACCCCCAGCTGCCAAGCAAGCATTGGCATTATCTaGGATGGTGACAGTTTGTGT +
Preference number: 4 (lower is better)
Translates to: ALAPVPEVCCLLTPSCQASIGII*DGDSLC
Trigger: ACACAAACTGTCACCATCTCAGATAATGCCAATGCT...TGCTTGGCAGCTGGGGGTGAGGAGACAACAAACCTCGGGAACTGGAGCCAGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR TCA 90 bp CCCTTGTCATGTGGTGTCTTGTGGGGAGAACGGCTCCTAAAAGTCAATTCCTTGGGGGGAGCACTTAGCTaGGCCACTGCTTCTGATGAG +
Preference number: 4 (lower is better)
Translates to: PLSCGVLWGERLLKVNSLGGALS*ATASDE
Trigger: CTCATCAGAAGCAGTGGCTCAGCTAAGTGCTCCCCC...CAAGGAATTGACTTTTAGGAGCCGTTCTCCCCACAAGACACCACATGACAAGGG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp CTAGGGAGAGACGCGGAAGTCCCACTAAGCTGGCTTTGGCTTCCAACACAGCTGCCTTGTCATTTGGGATaGAAGAAAGGCCCAGGATCA +
Preference number: 4 (lower is better)
Translates to: LGRDAEVPLSWLWLPTQLPCHLG*KKGPGS
Trigger: TGATCCTGGGCCTTTCTTTCATCCCAAATGACAAGG...CAGCTGTGTTGGAAGCCAAAGCCAGCTTAGTGGGACTTCCGCGTCTCTCCCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp CCCTTGTCATGTGGTGTCTTGTGGGGAGAACGGCTCCTAAAAGTCAATTCCTTGGGCAAGAGAACTGCTTaGACCCAGGAGGCGGAGGTT +
Preference number: 4 (lower is better)
Translates to: PLSCGVLWGERLLKVNSLGKRTA*TQEAEV
Trigger: AACCTCCGCCTCCTGGGTTCAAGCAGTTCTCTTGCC...CAAGGAATTGACTTTTAGGAGCCGTTCTCCCCACAAGACACCACATGACAAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp GCTCTGGCTCCAGTTCCCGAGGTTTGTTGTCTCCTCACCCCCAGCTGCCAAGCAACCAGCCTAACAAGGTaGAATCCCGTTTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: ALAPVPEVCCLLTPSCQATSLTR*NPVSTK
Trigger: TTTAGTAGAAACGGGATTTCACCTTGTTAGGCTGGT...TGCTTGGCAGCTGGGGGTGAGGAGACAACAAACCTCGGGAACTGGAGCCAGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR GCA 90 bp AGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAGAAGTTCAATGGTGCGCCCGCCACTGCTaGAGCCCGACGAACAATGGC +
Preference number: 4 (lower is better)
Translates to: RGHHTAITQLKPRTEVQWCARHC*SPTNNG
Trigger: GCCATTGTTCGTCGGGCTGCAGCAGTGGCGGGCGCA...CCATTGAACTTCTGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644600.1
ENST00000644780.1
ENST00000650265.1
CDS-3UTR GCA 90 bp AAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAATACATACTTCCTGCGCCCGCCACTaGTGCAGCCCGACGAACAAT +
Preference number: 4 (lower is better)
Translates to: KAGFGQSIATPLYPTIHTSCARH*CSPTNN
Trigger: ATTGTTCGTCGGGCTGCAGCAGTGGCGGGCGCAGGA...AGTATGTATTGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644600.1
ENST00000644780.1
ENST00000650265.1
CDS-3UTR GCA 90 bp CAGAGACAGTTCTCAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTCCTATTCCTGCGCCCGCCACTaGTGCAGCCCGACGAACAAT +
Preference number: 4 (lower is better)
Translates to: QRQFSEANHLLVAPNSSYSCARH*CSPTNN
Trigger: ATTGTTCGTCGGGCTGCAGCAGTGGCGGGCGCAGGA...ATAGGAGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTGAGAACTGTCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000645184.1
ENST00000648181.1
ENST00000648891.1
CDS-3UTR GCA 90 bp GCCCAGGCTGGTCTTAAACTACTGGACTCAAGTGATCTGCCTGTCTTGGCCTCCGTCGTGAAAGTCCTCTaGTTTCTGATGTCCGCTCCT +
Preference number: 4 (lower is better)
Translates to: AQAGLKLLDSSDLPVLASVVKVL*FLMSAP
Trigger: AGGAGCGGACATCAGAAAGCAGAGGACTTTCACGAC...GGAGGCCAAGACAGGCAGATCACTTGAGTCCAGTAGTTTAAGACCAGCCTGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000645184.1
ENST00000648181.1
CDS-3UTR GCA 90 bp CTAGGGAGAGACGCGGAAGTCCCACTAAGCTGGCTTTGGCTTCCAACACAGCTGCTGACTCTACTTCTTTaGCTTCTTCCTCGGACACCT +
Preference number: 4 (lower is better)
Translates to: LGRDAEVPLSWLWLPTQLLTLLL*LLPRTP
Trigger: AGGTGTCCGAGGAAGAAGGCAAAGAAGTAGAGTCAG...CAGCTGTGTTGGAAGCCAAAGCCAGCTTAGTGGGACTTCCGCGTCTCTCCCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp AGCTGCTGCTCCATCGAGGCTCCGGGACGCCCGTTTACTTGCTGTACGCTCGAACCAACAAAGAAACCTTaGAGTGCATGTTCCTGTGTT +
Preference number: 4 (lower is better)
Translates to: SCCSIEAPGRPFTCCTLEPTKKP*SACSCV
Trigger: AACACAGGAACATGCACTGCAAGGTTTCTTTGTTGG...TTCGAGCGTACAGCAAGTAAACGGGCGTCCCGGAGCCTCGATGGAGCAGCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
CDS-3UTR GCA 90 bp GTTGGGAGAAGCAGCTTTAGACATTTCTCTTGCTCACTGCCCTTGAGCCCCAGTACAGGGCAGACGTCCTaGAACTATGTCCTGCCGAAG +
Preference number: 4 (lower is better)
Translates to: VGRSSFRHFSCSLPLSPSTGQTS*NYVLPK
Trigger: CTTCGGCAGGACATAGTTGCAGGACGTCTGCCCTGT...ACTGGGGCTCAAGGGCAGTGAGCAAGAGAAATGTCTAAAGCTGCTTCTCCCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp GCAGGTGCAGAAGTGGGCCGAGGACTTCGGTCTGCCGAATCGACAGCTGCTGCTTCCTTCCAAGTCCTTTaGTTTATGAAGATCAACTCC +
Preference number: 4 (lower is better)
Translates to: AGAEVGRGLRSAESTAAASFQVL*FMKINS
Trigger: GGAGTTGATCTTCATAAAGCAAAGGACTTGGAAGGA...AGCAGCAGCTGTCGATTCGGCAGACCGAAGTCCTCGGCCCACTTCTGCACCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643155.1
ENST00000648891.1
CDS-3UTR GCA 90 bp AGTGGGCCGAGGACTTCGGTCTGCCGAATCGACAGCTGCTGCTCCATCGAGGCTTCCTTCCAAGTCCTTTaGTTTATGAAGATCAACTCC +
Preference number: 4 (lower is better)
Translates to: SGPRTSVCRIDSCCSIEASFQVL*FMKINS
Trigger: GGAGTTGATCTTCATAAAGCAAAGGACTTGGAAGGA...AGCCTCGATGGAGCAGCAGCTGTCGATTCGGCAGACCGAAGTCCTCGGCCCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643155.1
ENST00000648891.1
CDS-3UTR GCA 90 bp CGAATCGACAGCTGCTGCTCCATCGAGGCTCCGGGACGCCCGTTTACTTGCTGTCTAGCGCAAGAAATTTaGTTTTGGGAATGGTGTCTG +
Preference number: 4 (lower is better)
Translates to: RIDSCCSIEAPGRPFTCCLAQEI*FWEWCL
Trigger: CAGACACCATTCCCAAAAGCAAATTTCTTGCGCTAG...ACAGCAAGTAAACGGGCGTCCCGGAGCCTCGATGGAGCAGCAGCTGTCGATTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
CDS-3UTR GCA 90 bp GTTGGGAGAAGCAGCTTTAGACATTTCTCTTGCTCACTGCCCTTGAGCCCCAGTGGACGCCCGTTTACTTaGTGTACGCTCGAAGTGTGG +
Preference number: 4 (lower is better)
Translates to: VGRSSFRHFSCSLPLSPSGRPFT*CTLEVW
Trigger: CCACACTTCGAGCGTACAGCAAGTAAACGGGCGTCC...ACTGGGGCTCAAGGGCAGTGAGCAAGAGAAATGTCTAAAGCTGCTTCTCCCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp CAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAATACACCGAGGACTTCGGTCTaGCGAATCGACAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: QKSWLWAVHCYSFVPHNTPRTSV*RIDSCC
Trigger: GCAGCAGCTGTCGATTCGGCAGACCGAAGTCCTCGG...TGTATTGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR GCA 90 bp AGCTGCAGAGACAGTTCTCAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTCCGAGGACTTCGGTCTaGCGAATCGACAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: SCRDSSQRLIIYWWLQIAPRTSV*RIDSCC
Trigger: GCAGCAGCTGTCGATTCGGCAGACCGAAGTCCTCGG...AGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTGAGAACTGTCTCTGCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648181.1
ENST00000648891.1
CDS-3UTR GCA 90 bp CAGCTGACAAGAGTCCTTGGAGGATTTCCCGAAGAATTCCATGGACCCTGTCAGCTGAGTAATGGCAGGTaGAGAAGTGGGCCGAGGACT +
Preference number: 4 (lower is better)
Translates to: QLTRVLGGFPEEFHGPCQLSNGR*RSGPRT
Trigger: AGTCCTCGGCCCACTTCTGCACCTGCCATTACTCAG...CTGACAGGGTCCATGGAATTCTTCGGGAAATCCTCCAAGGACTCTTGTCAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp GAAGCTGGAACTGGGATTCTAAGGAGCCTTGAGGCCAATGTGTTTGTGGGAAGCCTGAGTAATGGCAGGTaGAGAAGTGGGCCGAGGACT +
Preference number: 4 (lower is better)
Translates to: EAGTGILRSLEANVFVGSLSNGR*RSGPRT
Trigger: AGTCCTCGGCCCACTTCTGCACCTGCCATTACTCAG...GCTTCCCACAAACACATTGGCCTCAAGGCTCCTTAGAATCCCAGTTCCAGCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp AGGCCGTGGTTCTGGTACAGACTCCATGAAGTTCTTTTTCAGCTCACTGATGCTGGCTCTGGCTCAGCTTaGTCAGGTGGCTCGTCTTCC +
Preference number: 4 (lower is better)
Translates to: RPWFWYRLHEVLFQLTDAGSGSA*SGGSSS
Trigger: GGAAGACGAGCCACCTGAGCAAGCTGAGCCAGAGCC...AGCATCAGTGAGCTGAAAAAGAACTTCATGGAGTCTGTACCAGAACCACGGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
CDS-3UTR GCA 90 bp CTGACCCTGAGTAATGGCAGGTGCAGAAGTGGGCCGAGGACTTCGGTCTGCCGATCTCCTGTGGGGATTTaGCCATTGATGTTAAGAGTT +
Preference number: 4 (lower is better)
Translates to: LTLSNGRCRSGPRTSVCRSPVGI*PLMLRV
Trigger: AACTCTTAACATCAATGGGCAAATCCCCACAGGAGA...TCGGCAGACCGAAGTCCTCGGCCCACTTCTGCACCTGCCATTACTCAGGGTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
CDS-3UTR GCA 90 bp TCCAAAGGGGATAAGACTAGGGAGAGACGCGGAAGTCCCACTAAGCTGGCTTTGGACATGTCTGGGTGCTaGTCCTTTGCCTCCTTGATG +
Preference number: 4 (lower is better)
Translates to: SKGDKTRERRGSPTKLALDMSGC*SFASLM
Trigger: CATCAAGGAGGCAAAGGAGCAGCACCCAGACATGTC...CAAAGCCAGCTTAGTGGGACTTCCGCGTCTCTCCCTAGTCTTATCCCCTTTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp GGTAGCTCTTCCTACAGGCCATCTGGCCATCAGGCAGTGGGCATGCACTACATGTTTAGACATTTCTCTTaGTCACTGCCCTTGAGCCCC +
Preference number: 4 (lower is better)
Translates to: GSSSYRPSGHQAVGMHYMFRHFS*SLPLSP
Trigger: GGGGCTCAAGGGCAGTGAGCAAGAGAAATGTCTAAA...CATGTAGTGCATGCCCACTGCCTGATGGCCAGATGGCCTGTAGGAAGAGCTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR GCA 90 bp GCATCTTTCCGAGGTCTGTGGATCAGGGCTGGTGCCCTCCCTGGCATTCTGATAGAAGGACACCCATCTTaGTGGGCTTGTCCAAATCTA +
Preference number: 4 (lower is better)
Translates to: ASFRGLWIRAGALPGILIEGHPS*WACPNL
Trigger: TAGATTTGGACAAGCCCAGCAAGATGGGTGTCCTTC...TATCAGAATGCCAGGGAGGGCACCAGCCCTGATCCACAGACCTCGGAAAGATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR GCA 90 bp CAATGCAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACACTGAGGCCGGAGAATTaGTTGAACCCGGGAGGCAGA +
Preference number: 4 (lower is better)
Translates to: QCRKAGFGQSIATPLYPTLRPEN*LNPGGR
Trigger: TCTGCCTCCCGGGTTCAAGCAATTCTCCGGCCTCAG...TGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTGCATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR CCA 90 bp TTAAACTTCAATGCAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTCAGCCCGACGAACAATaGCAGGAGGAGGCGCCGGCG +
Preference number: 4 (lower is better)
Translates to: LNFNAEKLALGSPLLLLCQPDEQ*QEEAPA
Trigger: CGCCGGCGCCTCCTCCTGCCATTGTTCGTCGGGCTG...ACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTGCATTGAAGTTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644600.1
ENST00000644780.1
ENST00000650265.1
CDS-3UTR CCA 90 bp CTGACCCTGAGTAATGGCAGGTGCAGAAGTGGGCCGAGGACTTCGGTCTGCCGAATGAAGATCCAAAGATaGGTCTGTTTTGAGTTCCGG +
Preference number: 4 (lower is better)
Translates to: LTLSNGRCRSGPRTSVCRMKIQR*VCFEFR
Trigger: CCGGAACTCAAAACAGACCCATCTTTGGATCTTCAT...TCGGCAGACCGAAGTCCTCGGCCCACTTCTGCACCTGCCATTACTCAGGGTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
CDS-3UTR CCA 90 bp AGCTGCTGCTCCATCGAGGCTCCGGGACGCCCGTTTACTTGCTGTACGCTCGAAATGAAGATCCAAAGATaGGTCTGTTTTGAGTTCCGG +
Preference number: 4 (lower is better)
Translates to: SCCSIEAPGRPFTCCTLEMKIQR*VCFEFR
Trigger: CCGGAACTCAAAACAGACCCATCTTTGGATCTTCAT...TTCGAGCGTACAGCAAGTAAACGGGCGTCCCGGAGCCTCGATGGAGCAGCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
CDS-3UTR CCA 90 bp CTAGGGAGAGACGCGGAAGTCCCACTAAGCTGGCTTTGGCTTCCAACACAGCTGCCTGAGCTGGAGTCATaGACCTGTATGACTTATGCA +
Preference number: 4 (lower is better)
Translates to: LGRDAEVPLSWLWLPTQLPELES*TCMTYA
Trigger: TGCATAAGTCATACAGGTCCATGACTCCAGCTCAGG...CAGCTGTGTTGGAAGCCAAAGCCAGCTTAGTGGGACTTCCGCGTCTCTCCCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp CAGCTGACAAGAGTCCTTGGAGGATTTCCCGAAGAATTCCATGGACCCTGTCAGCCTTCCATGCTTCTGTaGGCTCTGGCTCAGCTTGCT +
Preference number: 4 (lower is better)
Translates to: QLTRVLGGFPEEFHGPCQPSMLL*ALAQLA
Trigger: AGCAAGCTGAGCCAGAGCCCACAGAAGCATGGAAGG...CTGACAGGGTCCATGGAATTCTTCGGGAAATCCTCCAAGGACTCTTGTCAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR CCA 90 bp GCCCAGGCTGGTCTTAAACTACTGGACTCAAGTGATCTGCCTGTCTTGGCCTCCCCATTCACTAGGCCGTaGTTCTGGTACAGACTCCAT +
Preference number: 4 (lower is better)
Translates to: AQAGLKLLDSSDLPVLASPFTRP*FWYRLH
Trigger: ATGGAGTCTGTACCAGAACCACGGCCTAGTGAATGG...GGAGGCCAAGACAGGCAGATCACTTGAGTCCAGTAGTTTAAGACCAGCCTGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000645184.1
ENST00000648181.1
CDS-3UTR CCA 90 bp GAAGCTGGAACTGGGATTCTAAGGAGCCTTGAGGCCAATGTGTTTGTGGGAAGCATCTCGGTCTCCTGGTaGACGACCACCTTGGTCACT +
Preference number: 4 (lower is better)
Translates to: EAGTGILRSLEANVFVGSISVSW*TTTLVT
Trigger: AGTGACCAAGGTGGTCGTCCACCAGGAGACCGAGAT...GCTTCCCACAAACACATTGGCCTCAAGGCTCCTTAGAATCCCAGTTCCAGCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp GCTCAGCTTGCTCAGGTGGCTCGTCTTCCTTTTTCACTTCAGCCTTCACTGTTTGCAATCTCGGTCTCCTaGTGGACGACCACCTTGGTC +
Preference number: 4 (lower is better)
Translates to: AQLAQVARLPFSLQPSLFAISVS*WTTTLV
Trigger: GACCAAGGTGGTCGTCCACCAGGAGACCGAGATTGC...AAACAGTGAAGGCTGAAGTGAAAAAGGAAGACGAGCCACCTGAGCAAGCTGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643155.1
CDS-3UTR CCA 90 bp GCATCTTTCCGAGGTCTGTGGATCAGGGCTGGTGCCCTCCCTGGCATTCTGATATCCCGAAGAATTCCATaGACCCTGTCAGTGTCTGTT +
Preference number: 4 (lower is better)
Translates to: ASFRGLWIRAGALPGILISRRIP*TLSVSV
Trigger: AACAGACACTGACAGGGTCCATGGAATTCTTCGGGA...TATCAGAATGCCAGGGAGGGCACCAGCCCTGATCCACAGACCTCGGAAAGATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp CCAACACAGCTGACAAGAGTCCTTGGAGGATTTCCCGAAGAATTCCATGGACCCGGCTGGTGCCCTCCCTaGCATTCTGATACACTCACA +
Preference number: 4 (lower is better)
Translates to: PTQLTRVLGGFPEEFHGPGWCPP*HSDTLT
Trigger: TGTGAGTGTATCAGAATGCCAGGGAGGGCACCAGCC...GGGTCCATGGAATTCTTCGGGAAATCCTCCAAGGACTCTTGTCAGCTGTGTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp TCCAAAGGGGATAAGACTAGGGAGAGACGCGGAAGTCCCACTAAGCTGGCTTTGTTTGGTCTCCTGAGATaGGAGCTAGGGGGAGCACTT +
Preference number: 4 (lower is better)
Translates to: SKGDKTRERRGSPTKLALFGLLR*ELGGAL
Trigger: AAGTGCTCCCCCTAGCTCCCATCTCAGGAGACCAAA...CAAAGCCAGCTTAGTGGGACTTCCGCGTCTCTCCCTAGTCTTATCCCCTTTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp GCATCTTTCCGAGGTCTGTGGATCAGGGCTGGTGCCCTCCCTGGCATTCTGATAACAAAACTCAGGCAGTaGAGACTTTGGACGGTGTTG +
Preference number: 4 (lower is better)
Translates to: ASFRGLWIRAGALPGILITKLRQ*RLWTVL
Trigger: CAACACCGTCCAAAGTCTCCACTGCCTGAGTTTTGT...TATCAGAATGCCAGGGAGGGCACCAGCCCTGATCCACAGACCTCGGAAAGATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp CTAGGGAGAGACGCGGAAGTCCCACTAAGCTGGCTTTGGCTTCCAACACAGCTGACAAAACTCAGGCAGTaGAGACTTTGGACGGTGTTG +
Preference number: 4 (lower is better)
Translates to: LGRDAEVPLSWLWLPTQLTKLRQ*RLWTVL
Trigger: CAACACCGTCCAAAGTCTCCACTGCCTGAGTTTTGT...CAGCTGTGTTGGAAGCCAAAGCCAGCTTAGTGGGACTTCCGCGTCTCTCCCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp TCCAAAGGGGATAAGACTAGGGAGAGACGCGGAAGTCCCACTAAGCTGGCTTTGAACTGTTGCCAGAGATaGAGGAAAGGGGAAGAGGCC +
Preference number: 4 (lower is better)
Translates to: SKGDKTRERRGSPTKLALNCCQR*RKGEEA
Trigger: GGCCTCTTCCCCTTTCCTCCATCTCTGGCAACAGTT...CAAAGCCAGCTTAGTGGGACTTCCGCGTCTCTCCCTAGTCTTATCCCCTTTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR CCA 90 bp TCCAAAGGGGATAAGACTAGGGAGAGACGCGGAAGTCCCACTAAGCTGGCTTTGGTCTTGCTTTGTGGGTaGGTGCCAGAGTCCTCATGT +
Preference number: 4 (lower is better)
Translates to: SKGDKTRERRGSPTKLALVLLCG*VPESSC
Trigger: ACATGAGGACTCTGGCACCCACCCACAAAGCAAGAC...CAAAGCCAGCTTAGTGGGACTTCCGCGTCTCTCCCTAGTCTTATCCCCTTTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR TCA 90 bp CAGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAGAAGTTCAATGCCGGCTGCTGCTGGCTaGCTGACTAAACGCACCAGC +
Preference number: 4 (lower is better)
Translates to: QRASYSNNTVEAKDRSSMPAAAG*LTKRTS
Trigger: GCTGGTGCGTTTAGTCAGTCAGCCAGCAGCAGCCGG...CATTGAACTTCTGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644600.1
ENST00000644780.1
ENST00000650265.1
CDS-3UTR TCA 90 bp GTTGGGAGAAGCAGCTTTAGACATTTCTCTTGCTCACTGCCCTTGAGCCCCAGTCAAGATTCCTCCTGCTaGGGTTCTTGTTGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: VGRSSFRHFSCSLPLSPSQDSSC*GSCWPE
Trigger: CTCAGGCCAACAAGAACCTCAGCAGGAGGAATCTTG...ACTGGGGCTCAAGGGCAGTGAGCAAGAGAAATGTCTAAAGCTGCTTCTCCCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp TCTTGGATGGGAGAAGGGCAGAGTTGGGGTAGGTTAGTTCCTGAGCTCACTCATCAAGATTCCTCCTGCTaGGGTTCTTGTTGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: SWMGEGQSWGRLVPELTHQDSSC*GSCWPE
Trigger: CTCAGGCCAACAAGAACCTCAGCAGGAGGAATCTTG...ATGAGTGAGCTCAGGAACTAACCTACCCCAACTCTGCCCTTCTCCCATCCAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643155.1
CDS-3UTR TCA 90 bp GCCCAGGCTGGTCTTAAACTACTGGACTCAAGTGATCTGCCTGTCTTGGCCTCCAAGTCCTCTGCTTTCTaGTGTCCGCTCCTTGTTCTT +
Preference number: 4 (lower is better)
Translates to: AQAGLKLLDSSDLPVLASKSSAF*CPLLVL
Trigger: AAGAACAAGGAGCGGACATCAGAAAGCAGAGGACTT...GGAGGCCAAGACAGGCAGATCACTTGAGTCCAGTAGTTTAAGACCAGCCTGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000645184.1
ENST00000648181.1
CDS-3UTR TCA 90 bp CTGACCCTGAGTAATGGCAGGTGCAGAAGTGGGCCGAGGACTTCGGTCTGCCGACTTCTTCCAAAAGATTaGGATGCTCACATACTCGTT +
Preference number: 4 (lower is better)
Translates to: LTLSNGRCRSGPRTSVCRLLPKD*DAHILV
Trigger: AACGAGTATGTGAGCATCTCAATCTTTTGGAAGAAG...TCGGCAGACCGAAGTCCTCGGCCCACTTCTGCACCTGCCATTACTCAGGGTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
CDS-3UTR TCA 90 bp GCATCTTTCCGAGGTCTGTGGATCAGGGCTGGTGCCCTCCCTGGCATTCTGATATCAAGTTCCTTGGTCTaGTTCGGGGCCAGTTTAAAA +
Preference number: 4 (lower is better)
Translates to: ASFRGLWIRAGALPGILISSSLV*FGASLK
Trigger: TTTTAAACTGGCCCCGAATCAGACCAAGGAACTTGA...TATCAGAATGCCAGGGAGGGCACCAGCCCTGATCCACAGACCTCGGAAAGATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp GCATCTTTCCGAGGTCTGTGGATCAGGGCTGGTGCCCTCCCTGGCATTCTGATAAGTCATGGACCTGTATaGCTTATGCAGTTCCATGAC +
Preference number: 4 (lower is better)
Translates to: ASFRGLWIRAGALPGILISHGPV*LMQFHD
Trigger: GTCATGGAACTGCATAAGTCATACAGGTCCATGACT...TATCAGAATGCCAGGGAGGGCACCAGCCCTGATCCACAGACCTCGGAAAGATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp CAATGCAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAAACTCCAAGTCAGCCTaGGCTGGAGTCATGGACCTG +
Preference number: 4 (lower is better)
Translates to: QCRKAGFGQSIATPLYPTNSKSA*AGVMDL
Trigger: CAGGTCCATGACTCCAGCTCAGGCTGACTTGGAGTT...TGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTGCATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp GTACGCTCGAAGTGTGGGGCAGGCCTGTCAATTAGAGCACTAGCTTGCCTGGTCAGCAGACACCTAGGATaGTATCTACTCCTTCCAAGT +
Preference number: 4 (lower is better)
Translates to: VRSKCGAGLSIRALACLVSRHLG*YLLLPS
Trigger: ACTTGGAAGGAGTAGATATCATCCTAGGTGTCTGCT...GACCAGGCAAGCTAGTGCTCTAATTGACAGGCCTGCCCCACACTTCGAGCGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
CDS-3UTR TCA 90 bp CTAGGGAGAGACGCGGAAGTCCCACTAAGCTGGCTTTGGCTTCCAACACAGCTGAGCAGACACCTAGGATaGTATCTACTCCTTCCAAGT +
Preference number: 4 (lower is better)
Translates to: LGRDAEVPLSWLWLPTQLSRHLG*YLLLPS
Trigger: ACTTGGAAGGAGTAGATATCATCCTAGGTGTCTGCT...CAGCTGTGTTGGAAGCCAAAGCCAGCTTAGTGGGACTTCCGCGTCTCTCCCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp CTCTGGCTCAGCTTGCTCAGGTGGCTCGTCTTCCTTTTTCACTTCAGCCTTCACTGTTTGGTCACCATTTaGGGTGGGTACTGTCACCTC +
Preference number: 4 (lower is better)
Translates to: LWLSLLRWLVFLFHFSLHCLVTI*GGYCHL
Trigger: GAGGTGACAGTACCCACCTCAAATGGTGACCAAACA...GTGAAGGCTGAAGTGAAAAAGGAAGACGAGCCACCTGAGCAAGCTGAGCCAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000643155.1
ENST00000648891.1
CDS-3UTR TCA 90 bp CTGACCCTGAGTAATGGCAGGTGCAGAAGTGGGCCGAGGACTTCGGTCTGCCGATCTTTTTCAGCTCACTaGTGCTGGCATGATGTTTTT +
Preference number: 4 (lower is better)
Translates to: LTLSNGRCRSGPRTSVCRSFSAH*CWHDVF
Trigger: AAAAACATCATGCCAGCATCAGTGAGCTGAAAAAGA...TCGGCAGACCGAAGTCCTCGGCCCACTTCTGCACCTGCCATTACTCAGGGTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
CDS-3UTR TCA 90 bp CTAGGGAGAGACGCGGAAGTCCCACTAAGCTGGCTTTGGCTTCCAACACAGCTGCTGGTACAGACTCCATaGAGTTCTTTTTCAGCTCAC +
Preference number: 4 (lower is better)
Translates to: LGRDAEVPLSWLWLPTQLLVQTP*SSFSAH
Trigger: GTGAGCTGAAAAAGAACTTCATGGAGTCTGTACCAG...CAGCTGTGTTGGAAGCCAAAGCCAGCTTAGTGGGACTTCCGCGTCTCTCCCTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR TCA 90 bp GAAGCTGGAACTGGGATTCTAAGGAGCCTTGAGGCCAATGTGTTTGTGGGAAGCGGGCAGCCTCATAAGTaGTGGTCTTGGTCTCAGTGT +
Preference number: 4 (lower is better)
Translates to: EAGTGILRSLEANVFVGSGQPHK*WSWSQC
Trigger: ACACTGAGACCAAGACCATCACTTATGAGGCTGCCC...GCTTCCCACAAACACATTGGCCTCAAGGCTCCTTAGAATCCCAGTTCCAGCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp GCATCTTTCCGAGGTCTGTGGATCAGGGCTGGTGCCCTCCCTGGCATTCTGATATCAGATGTGATAGTTTaGGCTGTCAGCAAGACTCCT +
Preference number: 4 (lower is better)
Translates to: ASFRGLWIRAGALPGILISDVIV*AVSKTP
Trigger: AGGAGTCTTGCTGACAGCTCAAACTATCACATCTGA...TATCAGAATGCCAGGGAGGGCACCAGCCCTGATCCACAGACCTCGGAAAGATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp CTAGGGAGAGACGCGGAAGTCCCACTAAGCTGGCTTTGGCTTCCAACACAGCTGTCAGATGTGATAGTTTaGGCTGTCAGCAAGACTCCT +
Preference number: 4 (lower is better)
Translates to: LGRDAEVPLSWLWLPTQLSDVIV*AVSKTP
Trigger: AGGAGTCTTGCTGACAGCTCAAACTATCACATCTGA...CAGCTGTGTTGGAAGCCAAAGCCAGCTTAGTGGGACTTCCGCGTCTCTCCCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp CTAGGGAGAGACGCGGAAGTCCCACTAAGCTGGCTTTGGCTTCCAACACAGCTGACAGTCTTGGTAATTTaGGTTGTGGTGGTGCTGCTT +
Preference number: 4 (lower is better)
Translates to: LGRDAEVPLSWLWLPTQLTVLVI*VVVVLL
Trigger: AAGCAGCACCACCACAACTCAAATTACCAAGACTGT...CAGCTGTGTTGGAAGCCAAAGCCAGCTTAGTGGGACTTCCGCGTCTCTCCCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp AGGTGCAGAAGTGGGCCGAGGACTTCGGTCTGCCGAATCGACAGCTGCTGCTCCTATCAGCATCTCCTGTaGTCACAATTCTCTTTTCAA +
Preference number: 4 (lower is better)
Translates to: RCRSGPRTSVCRIDSCCSYQHLL*SQFSFQ
Trigger: TTGAAAAGAGAATTGTGATCACAGGAGATGCTGATA...GGAGCAGCAGCTGTCGATTCGGCAGACCGAAGTCCTCGGCCCACTTCTGCACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643155.1
CDS-3UTR TCA 90 bp CTAGGGAGAGACGCGGAAGTCCCACTAAGCTGGCTTTGGCTTCCAACACAGCTGGCTTGTACAAGGACCTaGTCATGGTCAATATCAGCA +
Preference number: 4 (lower is better)
Translates to: LGRDAEVPLSWLWLPTQLACTRT*SWSISA
Trigger: TGCTGATATTGACCATGATCAGGTCCTTGTACAAGC...CAGCTGTGTTGGAAGCCAAAGCCAGCTTAGTGGGACTTCCGCGTCTCTCCCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp CAGCTGACAAGAGTCCTTGGAGGATTTCCCGAAGAATTCCATGGACCCTGTCAGGCTCCTTTGCCTCCTTaGTGGCTTGTACAAGGACCT +
Preference number: 4 (lower is better)
Translates to: QLTRVLGGFPEEFHGPCQAPLPP*WLVQGP
Trigger: AGGTCCTTGTACAAGCCATCAAGGAGGCAAAGGAGC...CTGACAGGGTCCATGGAATTCTTCGGGAAATCCTCCAAGGACTCTTGTCAGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp CCCTTGTCATGTGGTGTCTTGTGGGGAGAACGGCTCCTAAAAGTCAATTCCTTGCCCTCCCTGGCATTCTaGTACACTCACATCACTGGC +
Preference number: 4 (lower is better)
Translates to: PLSCGVLWGERLLKVNSLPSLAF*YTHITG
Trigger: GCCAGTGATGTGAGTGTATCAGAATGCCAGGGAGGG...CAAGGAATTGACTTTTAGGAGCCGTTCTCCCCACAAGACACCACATGACAAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp GCATCTTTCCGAGGTCTGTGGATCAGGGCTGGTGCCCTCCCTGGCATTCTGATACAGGCAGGTTCCTGTTaGGAGAAGAAAGGTCAAAAA +
Preference number: 4 (lower is better)
Translates to: ASFRGLWIRAGALPGILIQAGSC*EKKGQK
Trigger: TTTTTGACCTTTCTTCTCTCAACAGGAACCTGCCTG...TATCAGAATGCCAGGGAGGGCACCAGCCCTGATCCACAGACCTCGGAAAGATGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp CAGATATCTGAAGCAACTTCCATGTCTTTGACCCAAAGAAGCTCCAAAAAGAAATGGGTCACGGGGCCCTaGCGGGTCCCGCAGTTAGGC +
Preference number: 4 (lower is better)
Translates to: QISEATSMSLTQRSSKKKWVTGP*RVPQLG
Trigger: GCCTAACTGCGGGACCCGTCAGGGCCCCGTGACCCA...TTTCTTTTTGGAGCTTCTTTGGGTCAAAGACATGGAAGTTGCTTCAGATATCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR TCA 90 bp CCCTTGTCATGTGGTGTCTTGTGGGGAGAACGGCTCCTAAAAGTCAATTCCTTGCAACCAGCCTGGGGCTaGGATCCTGGGCAGAAATTT +
Preference number: 4 (lower is better)
Translates to: PLSCGVLWGERLLKVNSLQPAWG*DPGQKF
Trigger: AAATTTCTGCCCAGGATCTCAGCCCCAGGCTGGTTG...CAAGGAATTGACTTTTAGGAGCCGTTCTCCCCACAAGACACCACATGACAAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR TCA 90 bp TCGACAGCTGCTGCTCCATCGAGGCTCCGGGACGCCCGTTTACTTGCTGTACGCTTTTTGATCTCCTCTTaGCTCTTGTCTAAATCCTTC +
Preference number: 4 (lower is better)
Translates to: STAAAPSRLRDARLLAVRFLISS*LLSKSF
Trigger: GAAGGATTTAGACAAGAGTCAAGAGGAGATCAAAAA...GCGTACAGCAAGTAAACGGGCGTCCCGGAGCCTCGATGGAGCAGCAGCTGTCGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000642643.1
CDS-3UTR TCA 90 bp AAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAATACATACTAGGCAGAGGTTGCAGTaGGCTGAGATCGCGCCACTG +
Preference number: 4 (lower is better)
Translates to: KAGFGQSIATPLYPTIHTRQRLQ*AEIAPL
Trigger: CAGTGGCGCGATCTCAGCTCACTGCAACCTCTGCCT...AGTATGTATTGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR TCA 90 bp CTGACCCTGAGTAATGGCAGGTGCAGAAGTGGGCCGAGGACTTCGGTCTGCCGACCTGAAGGCACAGTTTaGATACAAATAAACCTCTAC +
Preference number: 4 (lower is better)
Translates to: LTLSNGRCRSGPRTSVCRPEGTV*IQINLY
Trigger: GTAGAGGTTTATTTGTATTCAAACTGTGCCTTCAGG...TCGGCAGACCGAAGTCCTCGGCCCACTTCTGCACCTGCCATTACTCAGGGTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642643.1
ENST00000648891.1
CDS-3UTR GCA 90 bp GCATCTTTCCGAGGTCTGTGGATCAGGGCTGGTGCCCTCCCTGGCATTCTGATATCTTCCTTCTGTTGGTaGTGTGAATTTTCGGCCTCA +
Preference number: 4 (lower is better)
Translates to: ASFRGLWIRAGALPGILISSFCW*CEFSAS
Trigger: TGAGGCCGAAAATTCACAGCACCAACAGAAGGAAGA...TATCAGAATGCCAGGGAGGGCACCAGCCCTGATCCACAGACCTCGGAAAGATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp GCTCTGGCTCCAGTTCCCGAGGTTTGTTGTCTCCTCACCCCCAGCTGCCAAGCAATTATCTCCTTCAGCTaGTGTTTGACAAGATTCCTC +
Preference number: 4 (lower is better)
Translates to: ALAPVPEVCCLLTPSCQAIISFS*CLTRFL
Trigger: GAGGAATCTTGTCAAACAGCAGCTGAAGGAGATAAT...TGCTTGGCAGCTGGGGGTGAGGAGACAACAAACCTCGGGAACTGGAGCCAGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR GCA 90 bp CAGAAGTGGGCCGAGGACTTCGGTCTGCCGAATCGACAGCTGCTGCTCCATCGAATTATCTCCTTCAGCTaGTGTTTGACAAGATTCCTC +
Preference number: 4 (lower is better)
Translates to: QKWAEDFGLPNRQLLLHRIISFS*CLTRFL
Trigger: GAGGAATCTTGTCAAACAGCAGCTGAAGGAGATAAT...TCGATGGAGCAGCAGCTGTCGATTCGGCAGACCGAAGTCCTCGGCCCACTTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643155.1
ENST00000648891.1
CDS-3UTR GCA 90 bp TCCAAAGGGGATAAGACTAGGGAGAGACGCGGAAGTCCCACTAAGCTGGCTTTGGTCGTGAAAGTCCTCTaGTTTCTGATGTCCGCTCCT +
Preference number: 4 (lower is better)
Translates to: SKGDKTRERRGSPTKLALVVKVL*FLMSAP
Trigger: AGGAGCGGACATCAGAAAGCAGAGGACTTTCACGAC...CAAAGCCAGCTTAGTGGGACTTCCGCGTCTCTCCCTAGTCTTATCCCCTTTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp CTGAGTAATGGCAGGTGCAGAAGTGGGCCGAGGACTTCGGTCTGCCGAATCGACCCAACAAAGAAACCTTaGAGTGCATGTTCCTGTGTT +
Preference number: 4 (lower is better)
Translates to: LSNGRCRSGPRTSVCRIDPTKKP*SACSCV
Trigger: AACACAGGAACATGCACTGCAAGGTTTCTTTGTTGG...GTCGATTCGGCAGACCGAAGTCCTCGGCCCACTTCTGCACCTGCCATTACTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
CDS-3UTR GCA 90 bp GAAGCATGTAGCTGCAGAGACAGTTCTCAGAGGCTAATCATCTACTGGTGGCTCGGACGCCCGTTTACTTaGTGTACGCTCGAAGTGTGG +
Preference number: 4 (lower is better)
Translates to: EACSCRDSSQRLIIYWWLGRPFT*CTLEVW
Trigger: CCACACTTCGAGCGTACAGCAAGTAAACGGGCGTCC...GAGCCACCAGTAGATGATTAGCCTCTGAGAACTGTCTCTGCAGCTACATGCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648181.1
ENST00000648891.1
CDS-3UTR GCA 90 bp CAGAGACAGTTCTCAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTCCTATCCGAGGACTTCGGTCTaGCGAATCGACAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: QRQFSEANHLLVAPNSSYPRTSV*RIDSCC
Trigger: GCAGCAGCTGTCGATTCGGCAGACCGAAGTCCTCGG...ATAGGAGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTGAGAACTGTCTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648181.1
ENST00000648891.1
CDS-3UTR GCA 90 bp ATGTTGCCCAGGCTGGTCTTAAACTACTGGACTCAAGTGATCTGCCTGTCTTGGCTGAGTAATGGCAGGTaGAGAAGTGGGCCGAGGACT +
Preference number: 4 (lower is better)
Translates to: MLPRLVLNYWTQVICLSWLSNGR*RSGPRT
Trigger: AGTCCTCGGCCCACTTCTGCACCTGCCATTACTCAG...CCAAGACAGGCAGATCACTTGAGTCCAGTAGTTTAAGACCAGCCTGGGCAACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000645184.1
ENST00000648181.1
CDS-3UTR GCA 90 bp CAATGCAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACACTGAGTAATGGCAGGTaGAGAAGTGGGCCGAGGACT +
Preference number: 4 (lower is better)
Translates to: QCRKAGFGQSIATPLYPTLSNGR*RSGPRT
Trigger: AGTCCTCGGCCCACTTCTGCACCTGCCATTACTCAG...TGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTGCATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR GCA 90 bp GAAGCTGGAACTGGGATTCTAAGGAGCCTTGAGGCCAATGTGTTTGTGGGAAGCTGGGTGCTGCTCCTTTaGCTCCTTGATGGCTTGTAC +
Preference number: 4 (lower is better)
Translates to: EAGTGILRSLEANVFVGSWVLLL*LLDGLY
Trigger: GTACAAGCCATCAAGGAGGCAAAGGAGCAGCACCCA...GCTTCCCACAAACACATTGGCCTCAAGGCTCCTTAGAATCCCAGTTCCAGCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp GAAGCTGGAACTGGGATTCTAAGGAGCCTTGAGGCCAATGTGTTTGTGGGAAGCGACATGTCTGGGTGCTaGTCCTTTGCCTCCTTGATG +
Preference number: 4 (lower is better)
Translates to: EAGTGILRSLEANVFVGSDMSGC*SFASLM
Trigger: CATCAAGGAGGCAAAGGAGCAGCACCCAGACATGTC...GCTTCCCACAAACACATTGGCCTCAAGGCTCCTTAGAATCCCAGTTCCAGCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp CCCTTGTCATGTGGTGTCTTGTGGGGAGAACGGCTCCTAAAAGTCAATTCCTTGCTGAGGCAAGAGAACTaGTTGAACCCAGGAGGCGGA +
Preference number: 4 (lower is better)
Translates to: PLSCGVLWGERLLKVNSLLRQEN*LNPGGG
Trigger: TCCGCCTCCTGGGTTCAAGCAGTTCTCTTGCCTCAG...CAAGGAATTGACTTTTAGGAGCCGTTCTCCCCACAAGACACCACATGACAAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp GGTAGCTCTTCCTACAGGCCATCTGGCCATCAGGCAGTGGGCATGCACTACATGACCTTTCAGACCCTCTaGCCACAGCCTATAATTTTG +
Preference number: 4 (lower is better)
Translates to: GSSSYRPSGHQAVGMHYMTFQTL*PQPIIL
Trigger: CAAAATTATAGGCTGTGGGCAGAGGGTCTGAAAGGT...CATGTAGTGCATGCCCACTGCCTGATGGCCAGATGGCCTGTAGGAAGAGCTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR GCA 90 bp CTAGGGAGAGACGCGGAAGTCCCACTAAGCTGGCTTTGGCTTCCAACACAGCTGTATAAATACAGGTCTTaGTTTGTGGGTGGGTGCCAG +
Preference number: 4 (lower is better)
Translates to: LGRDAEVPLSWLWLPTQLYKYRS*FVGGCQ
Trigger: CTGGCACCCACCCACAAAGCAAGACCTGTATTTATA...CAGCTGTGTTGGAAGCCAAAGCCAGCTTAGTGGGACTTCCGCGTCTCTCCCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR GCA 90 bp ATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAGTCAACTCCCGCCTTCCCTCTaGGAGGCGAGGCCAGCCCGG +
Preference number: 4 (lower is better)
Translates to: IEKFLFPLQFLYSAIHSQLPPSL*EARPAR
Trigger: CCGGGCTGGCCTCGCCTCGCAGAGGGAAGGCGGGAG...TTGACTATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000644600.1
CDS-3UTR GCA 90 bp GAAGCATGTAGCTGCAGAGACAGTTCTCAGAGGCTAATCATCTACTGGTGGCTCGCAATCATGGCTCACTaGAGCCTTGGTCTCCTGGCT +
Preference number: 4 (lower is better)
Translates to: EACSCRDSSQRLIIYWWLAIMAH*SLGLLA
Trigger: AGCCAGGAGACCAAGGCTGCAGTGAGCCATGATTGC...GAGCCACCAGTAGATGATTAGCCTCTGAGAACTGTCTCTGCAGCTACATGCTTC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645184.1
CDS-3UTR CCA 90 bp TTAAACTTCAATGCAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTGTCATGATGTTGCGGTaGCTCCGGGGCCGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: LNFNAEKLALGSPLLLLCVMMLR*LRGRAP
Trigger: AGGAGCCCGGCCCCGGAGCCACCGCAACATCATGAC...ACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTGCATTGAAGTTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644600.1
ENST00000644780.1
ENST00000650265.1
CDS-3UTR CCA 90 bp AGAAGTCAACATGCAAACAGAGGACACATACTTGTCACAAGTGAACTTGAGGTCGTCATGATGTTGCGGTaGCTCCGGGGCCGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: RSQHANRGHILVTSELEVVMMLR*LRGRAP
Trigger: AGGAGCCCGGCCCCGGAGCCACCGCAACATCATGAC...GACCTCAAGTTCACTTGTGACAAGTATGTGTCCTCTGTTTGCATGTTGACTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644600.1
ENST00000644780.1
ENST00000650265.1
CDS-3UTR CCA 90 bp CAATGCAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACACACGCCATGGAGTTCTaGGTCGTAGTCTCCCAGTTC +
Preference number: 4 (lower is better)
Translates to: QCRKAGFGQSIATPLYPTHAMEF*VVVSQF
Trigger: GAACTGGGAGACTACGACCCAGAACTCCATGGCGTG...TGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTGCATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CCA 90 bp GCCCAGGCTGGTCTTAAACTACTGGACTCAAGTGATCTGCCTGTCTTGGCCTCCCCTGAGCTGGAGTCATaGACCTGTATGACTTATGCA +
Preference number: 4 (lower is better)
Translates to: AQAGLKLLDSSDLPVLASPELES*TCMTYA
Trigger: TGCATAAGTCATACAGGTCCATGACTCCAGCTCAGG...GGAGGCCAAGACAGGCAGATCACTTGAGTCCAGTAGTTTAAGACCAGCCTGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000645184.1
ENST00000648181.1
CDS-3UTR CCA 90 bp GCCCAGGCTGGTCTTAAACTACTGGACTCAAGTGATCTGCCTGTCTTGGCCTCCGCAAGCTTCTGTGTTTaGTCACCATTTGAGGTGGGT +
Preference number: 4 (lower is better)
Translates to: AQAGLKLLDSSDLPVLASASFCV*SPFEVG
Trigger: ACCCACCTCAAATGGTGACCAAACACAGAAGCTTGC...GGAGGCCAAGACAGGCAGATCACTTGAGTCCAGTAGTTTAAGACCAGCCTGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648181.1
CDS-3UTR CCA 90 bp GCCCAGGCTGGTCTTAAACTACTGGACTCAAGTGATCTGCCTGTCTTGGCCTCCACTAGGCCGTGGTTCTaGTACAGACTCCATGAAGTT +
Preference number: 4 (lower is better)
Translates to: AQAGLKLLDSSDLPVLASTRPWF*YRLHEV
Trigger: AACTTCATGGAGTCTGTACCAGAACCACGGCCTAGT...GGAGGCCAAGACAGGCAGATCACTTGAGTCCAGTAGTTTAAGACCAGCCTGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000645184.1
ENST00000648181.1
CDS-3UTR CCA 90 bp CTCTGGCTCAGCTTGCTCAGGTGGCTCGTCTTCCTTTTTCACTTCAGCCTTCACCCATTCACTAGGCCGTaGTTCTGGTACAGACTCCAT +
Preference number: 4 (lower is better)
Translates to: LWLSLLRWLVFLFHFSLHPFTRP*FWYRLH
Trigger: ATGGAGTCTGTACCAGAACCACGGCCTAGTGAATGG...GTGAAGGCTGAAGTGAAAAAGGAAGACGAGCCACCTGAGCAAGCTGAGCCAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
CDS-3UTR CCA 90 bp GGTAGCTCTTCCTACAGGCCATCTGGCCATCAGGCAGTGGGCATGCACTACATGGGAAGGGTGAGTGAGTaGATAAGCGTTTATCCCATT +
Preference number: 4 (lower is better)
Translates to: GSSSYRPSGHQAVGMHYMGRVSE*ISVYPI
Trigger: AATGGGATAAACGCTTATCCACTCACTCACCCTTCC...CATGTAGTGCATGCCCACTGCCTGATGGCCAGATGGCCTGTAGGAAGAGCTACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR CCA 90 bp GCATCTTTCCGAGGTCTGTGGATCAGGGCTGGTGCCCTCCCTGGCATTCTGATAAGGGACGTCTTTGGTTaGGATTTCACTTTTCACAGC +
Preference number: 4 (lower is better)
Translates to: ASFRGLWIRAGALPGILIRDVFG*DFTFHS
Trigger: GCTGTGAAAAGTGAAATCCCAACCAAAGACGTCCCT...TATCAGAATGCCAGGGAGGGCACCAGCCCTGATCCACAGACCTCGGAAAGATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp GTACGCTCGAAGTGTGGGGCAGGCCTGTCAATTAGAGCACTAGCTTGCCTGGTCAGGGACGTCTTTGGTTaGGATTTCACTTTTCACAGC +
Preference number: 4 (lower is better)
Translates to: VRSKCGAGLSIRALACLVRDVFG*DFTFHS
Trigger: GCTGTGAAAAGTGAAATCCCAACCAAAGACGTCCCT...GACCAGGCAAGCTAGTGCTCTAATTGACAGGCCTGCCCCACACTTCGAGCGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643155.1
CDS-3UTR CCA 90 bp TCCAAAGGGGATAAGACTAGGGAGAGACGCGGAAGTCCCACTAAGCTGGCTTTGTGTCAGCAAGACTCCTaGGTCCAAGTCTCCACTGTT +
Preference number: 4 (lower is better)
Translates to: SKGDKTRERRGSPTKLALCQQDS*VQVSTV
Trigger: AACAGTGGAGACTTGGACCCAGGAGTCTTGCTGACA...CAAAGCCAGCTTAGTGGGACTTCCGCGTCTCTCCCTAGTCTTATCCCCTTTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp CCAACACAGCTGACAAGAGTCCTTGGAGGATTTCCCGAAGAATTCCATGGACCCGGAGAAGGGCAGAGTTaGGGTAGGTTAGTTCCTGAG +
Preference number: 4 (lower is better)
Translates to: PTQLTRVLGGFPEEFHGPGEGQS*GRLVPE
Trigger: CTCAGGAACTAACCTACCCCAACTCTGCCCTTCTCC...GGGTCCATGGAATTCTTCGGGAAATCCTCCAAGGACTCTTGTCAGCTGTGTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp CCAACACAGCTGACAAGAGTCCTTGGAGGATTTCCCGAAGAATTCCATGGACCCCTGGTTTCTCTTGGATaGGAGAAGGGCAGAGTTGGG +
Preference number: 4 (lower is better)
Translates to: PTQLTRVLGGFPEEFHGPLVSLG*EKGRVG
Trigger: CCCAACTCTGCCCTTCTCCCATCCAAGAGAAACCAG...GGGTCCATGGAATTCTTCGGGAAATCCTCCAAGGACTCTTGTCAGCTGTGTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp TCCAAAGGGGATAAGACTAGGGAGAGACGCGGAAGTCCCACTAAGCTGGCTTTGCCACTAAGCTGGCTTTaGCTTCCAACACAGCTGACA +
Preference number: 4 (lower is better)
Translates to: SKGDKTRERRGSPTKLALPLSWL*LPTQLT
Trigger: TGTCAGCTGTGTTGGAAGCCAAAGCCAGCTTAGTGG...CAAAGCCAGCTTAGTGGGACTTCCGCGTCTCTCCCTAGTCTTATCCCCTTTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp CTAGGGAGAGACGCGGAAGTCCCACTAAGCTGGCTTTGGCTTCCAACACAGCTGAGGCCAATGTGTTTGTaGGAAGCAGTTGGAAGGTTA +
Preference number: 4 (lower is better)
Translates to: LGRDAEVPLSWLWLPTQLRPMCL*EAVGRL
Trigger: TAACCTTCCAACTGCTTCCCACAAACACATTGGCCT...CAGCTGTGTTGGAAGCCAAAGCCAGCTTAGTGGGACTTCCGCGTCTCTCCCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp GTTGGGAGAAGCAGCTTTAGACATTTCTCTTGCTCACTGCCCTTGAGCCCCAGTAGGCAGTGGAGACTTTaGACGGTGTTGGGAGAAGCA +
Preference number: 4 (lower is better)
Translates to: VGRSSFRHFSCSLPLSPSRQWRL*TVLGEA
Trigger: TGCTTCTCCCAACACCGTCCAAAGTCTCCACTGCCT...ACTGGGGCTCAAGGGCAGTGAGCAAGAGAAATGTCTAAAGCTGCTTCTCCCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp CCAACACAGCTGACAAGAGTCCTTGGAGGATTTCCCGAAGAATTCCATGGACCCAGGCAGTGGAGACTTTaGACGGTGTTGGGAGAAGCA +
Preference number: 4 (lower is better)
Translates to: PTQLTRVLGGFPEEFHGPRQWRL*TVLGEA
Trigger: TGCTTCTCCCAACACCGTCCAAAGTCTCCACTGCCT...GGGTCCATGGAATTCTTCGGGAAATCCTCCAAGGACTCTTGTCAGCTGTGTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp GCTCTGGCTCCAGTTCCCGAGGTTTGTTGTCTCCTCACCCCCAGCTGCCAAGCACTCACCATTTCTACCTaGACAGAGTCTGTTTTTCTT +
Preference number: 4 (lower is better)
Translates to: ALAPVPEVCCLLTPSCQALTIST*TESVFL
Trigger: AAGAAAAACAGACTCTGTCCAGGTAGAAATGGTGAG...TGCTTGGCAGCTGGGGGTGAGGAGACAACAAACCTCGGGAACTGGAGCCAGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR CCA 90 bp CAGCTGACAAGAGTCCTTGGAGGATTTCCCGAAGAATTCCATGGACCCTGTCAGGTCTTGCTTTGTGGGTaGGTGCCAGAGTCCTCATGT +
Preference number: 4 (lower is better)
Translates to: QLTRVLGGFPEEFHGPCQVLLCG*VPESSC
Trigger: ACATGAGGACTCTGGCACCCACCCACAAAGCAAGAC...CTGACAGGGTCCATGGAATTCTTCGGGAAATCCTCCAAGGACTCTTGTCAGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR CCA 90 bp GTTGGGAGAAGCAGCTTTAGACATTTCTCTTGCTCACTGCCCTTGAGCCCCAGTGTCTTGCTTTGTGGGTaGGTGCCAGAGTCCTCATGT +
Preference number: 4 (lower is better)
Translates to: VGRSSFRHFSCSLPLSPSVLLCG*VPESSC
Trigger: ACATGAGGACTCTGGCACCCACCCACAAAGCAAGAC...ACTGGGGCTCAAGGGCAGTGAGCAAGAGAAATGTCTAAAGCTGCTTCTCCCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR CCA 90 bp CCCTTGTCATGTGGTGTCTTGTGGGGAGAACGGCTCCTAAAAGTCAATTCCTTGCTGGGGCTGAGATCCTaGGCAGAAATTTCCCGTGAG +
Preference number: 4 (lower is better)
Translates to: PLSCGVLWGERLLKVNSLLGLRS*AEISRE
Trigger: CTCACGGGAAATTTCTGCCCAGGATCTCAGCCCCAG...CAAGGAATTGACTTTTAGGAGCCGTTCTCCCCACAAGACACCACATGACAAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR CCA 90 bp GAAGCATGTAGCTGCAGAGACAGTTCTCAGAGGCTAATCATCTACTGGTGGCTCAGCCCCCTGAGTAGCTaGACTACACAGGTGTACACC +
Preference number: 4 (lower is better)
Translates to: EACSCRDSSQRLIIYWWLSPLSS*TTQVYT
Trigger: GGTGTACACCTGTGTAGTCCAGCTACTCAGGGGGCT...GAGCCACCAGTAGATGATTAGCCTCTGAGAACTGTCTCTGCAGCTACATGCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000645184.1
ENST00000648181.1
CDS-3UTR TCA 90 bp TCTATACACCAGGCAGGAAAAAGTTGTCTGTCCCTGTACAGCTCAGAAATACTCCTGCTGCTGGCTGACTaGCTAAACGCACCAGCGGAG +
Preference number: 4 (lower is better)
Translates to: SIHQAGKSCLSLYSSEILLLLAD*LNAPAE
Trigger: CTCCGCTGGTGCGTTTAGTCAGTCAGCCAGCAGCAG...GAGTATTTCTGAGCTGTACAGGGACAGACAACTTTTTCCTGCCTGGTGTATAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644600.1
ENST00000644780.1
ENST00000650265.1
CDS-3UTR TCA 90 bp CAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAATACATCTTCTCTGTTGTCATaGTGTTGCGGTGGCTCCGGG +
Preference number: 4 (lower is better)
Translates to: QKSWLWAVHCYSFVPHNTSSLLS*CCGGSG
Trigger: CCCGGAGCCACCGCAACATCATGACAACAGAGAAGA...TGTATTGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644600.1
ENST00000644780.1
ENST00000650265.1
CDS-3UTR TCA 90 bp GAAGCTGGAACTGGGATTCTAAGGAGCCTTGAGGCCAATGTGTTTGTGGGAAGCCTTCTGTTGGTGCTGTaGATTTTCGGCCTCAGTCAC +
Preference number: 4 (lower is better)
Translates to: EAGTGILRSLEANVFVGSLLLVL*IFGLSH
Trigger: GTGACTGAGGCCGAAAATTCACAGCACCAACAGAAG...GCTTCCCACAAACACATTGGCCTCAAGGCTCCTTAGAATCCCAGTTCCAGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp GGCTCAGCTTGCTCAGGTGGCTCGTCTTCCTTTTTCACTTCAGCCTTCACTGTTCTTCTGTTGGTGCTGTaGATTTTCGGCCTCAGTCAC +
Preference number: 4 (lower is better)
Translates to: GSACSGGSSSFFTSAFTVLLLVL*IFGLSH
Trigger: GTGACTGAGGCCGAAAATTCACAGCACCAACAGAAG...AACAGTGAAGGCTGAAGTGAAAAAGGAAGACGAGCCACCTGAGCAAGCTGAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000643155.1
ENST00000648891.1
CDS-3UTR TCA 90 bp CCAACACAGCTGACAAGAGTCCTTGGAGGATTTCCCGAAGAATTCCATGGACCCAGGTTCTTGTTGGCCTaGGTTTATGGCTTCCTCACC +
Preference number: 4 (lower is better)
Translates to: PTQLTRVLGGFPEEFHGPRFLLA*VYGFLT
Trigger: GGTGAGGAAGCCATAAACTCAGGCCAACAAGAACCT...GGGTCCATGGAATTCTTCGGGAAATCCTCCAAGGACTCTTGTCAGCTGTGTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp CCCTTGTCATGTGGTGTCTTGTGGGGAGAACGGCTCCTAAAAGTCAATTCCTTGCAAGATTCCTCCTGCTaGGGTTCTTGTTGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: PLSCGVLWGERLLKVNSLQDSSC*GSCWPE
Trigger: CTCAGGCCAACAAGAACCTCAGCAGGAGGAATCTTG...CAAGGAATTGACTTTTAGGAGCCGTTCTCCCCACAAGACACCACATGACAAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp CAGCTGACAAGAGTCCTTGGAGGATTTCCCGAAGAATTCCATGGACCCTGTCAGAAGATGGGTCTGTTTTaGGTTCCGGTTCAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: QLTRVLGGFPEEFHGPCQKMGLF*VPVQEL
Trigger: CAGCTCCTGAACCGGAACTCAAAACAGACCCATCTT...CTGACAGGGTCCATGGAATTCTTCGGGAAATCCTCCAAGGACTCTTGTCAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp GTTGGGAGAAGCAGCTTTAGACATTTCTCTTGCTCACTGCCCTTGAGCCCCAGTAAGATGGGTCTGTTTTaGGTTCCGGTTCAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: VGRSSFRHFSCSLPLSPSKMGLF*VPVQEL
Trigger: CAGCTCCTGAACCGGAACTCAAAACAGACCCATCTT...ACTGGGGCTCAAGGGCAGTGAGCAAGAGAAATGTCTAAAGCTGCTTCTCCCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp CTAGGGAGAGACGCGGAAGTCCCACTAAGCTGGCTTTGGCTTCCAACACAGCTGACTTATGCAGTTCCATaGCCTTCTCTTCAAGTTCCT +
Preference number: 4 (lower is better)
Translates to: LGRDAEVPLSWLWLPTQLTYAVP*PSLQVP
Trigger: AGGAACTTGAAGAGAAGGTCATGGAACTGCATAAGT...CAGCTGTGTTGGAAGCCAAAGCCAGCTTAGTGGGACTTCCGCGTCTCTCCCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp GCATCTTTCCGAGGTCTGTGGATCAGGGCTGGTGCCCTCCCTGGCATTCTGATAACTTATGCAGTTCCATaGCCTTCTCTTCAAGTTCCT +
Preference number: 4 (lower is better)
Translates to: ASFRGLWIRAGALPGILITYAVP*PSLQVP
Trigger: AGGAACTTGAAGAGAAGGTCATGGAACTGCATAAGT...TATCAGAATGCCAGGGAGGGCACCAGCCCTGATCCACAGACCTCGGAAAGATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp CAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAATACAAACTCCAAGTCAGCCTaGGCTGGAGTCATGGACCTG +
Preference number: 4 (lower is better)
Translates to: QKSWLWAVHCYSFVPHNTNSKSA*AGVMDL
Trigger: CAGGTCCATGACTCCAGCTCAGGCTGACTTGGAGTT...TGTATTGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp GCTCTGGCTCCAGTTCCCGAGGTTTGTTGTCTCCTCACCCCCAGCTGCCAAGCAAATCTGAAAAACGTGTaGTGTTCTACACAGACTTTC +
Preference number: 4 (lower is better)
Translates to: ALAPVPEVCCLLTPSCQANLKNV*CSTQTF
Trigger: GAAAGTCTGTGTAGAACATCACACGTTTTTCAGATT...TGCTTGGCAGCTGGGGGTGAGGAGACAACAAACCTCGGGAACTGGAGCCAGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR TCA 90 bp CAGCTGACAAGAGTCCTTGGAGGATTTCCCGAAGAATTCCATGGACCCTGTCAGGTTCGGAAGGGTGAGTaGGTGGATAAGCGTTTATCC +
Preference number: 4 (lower is better)
Translates to: QLTRVLGGFPEEFHGPCQVRKGE*VDKRLS
Trigger: GGATAAACGCTTATCCACTCACTCACCCTTCCGAAC...CTGACAGGGTCCATGGAATTCTTCGGGAAATCCTCCAAGGACTCTTGTCAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR TCA 90 bp TCTTGGATGGGAGAAGGGCAGAGTTGGGGTAGGTTAGTTCCTGAGCTCACTCATGTTCGGAAGGGTGAGTaGGTGGATAAGCGTTTATCC +
Preference number: 4 (lower is better)
Translates to: SWMGEGQSWGRLVPELTHVRKGE*VDKRLS
Trigger: GGATAAACGCTTATCCACTCACTCACCCTTCCGAAC...ATGAGTGAGCTCAGGAACTAACCTACCCCAACTCTGCCCTTCTCCCATCCAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643155.1
CDS-3UTR TCA 90 bp GGTAGCTCTTCCTACAGGCCATCTGGCCATCAGGCAGTGGGCATGCACTACATGAGCATTGGCATTATCTaGGATGGTGACAGTTTGTGT +
Preference number: 4 (lower is better)
Translates to: GSSSYRPSGHQAVGMHYMSIGII*DGDSLC
Trigger: ACACAAACTGTCACCATCTCAGATAATGCCAATGCT...CATGTAGTGCATGCCCACTGCCTGATGGCCAGATGGCCTGTAGGAAGAGCTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR TCA 90 bp CTAGGGAGAGACGCGGAAGTCCCACTAAGCTGGCTTTGGCTTCCAACACAGCTGAGCATTGGCATTATCTaGGATGGTGACAGTTTGTGT +
Preference number: 4 (lower is better)
Translates to: LGRDAEVPLSWLWLPTQLSIGII*DGDSLC
Trigger: ACACAAACTGTCACCATCTCAGATAATGCCAATGCT...CAGCTGTGTTGGAAGCCAAAGCCAGCTTAGTGGGACTTCCGCGTCTCTCCCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp GCTCTGGCTCCAGTTCCCGAGGTTTGTTGTCTCCTCACCCCCAGCTGCCAAGCATATCAGCATCTCCTGTaGTCACAATTCTCTTTTCAA +
Preference number: 4 (lower is better)
Translates to: ALAPVPEVCCLLTPSCQAYQHLL*SQFSFQ
Trigger: TTGAAAAGAGAATTGTGATCACAGGAGATGCTGATA...TGCTTGGCAGCTGGGGGTGAGGAGACAACAAACCTCGGGAACTGGAGCCAGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR TCA 90 bp CCGTGGTTCTGGTACAGACTCCATGAAGTTCTTTTTCAGCTCACTGATGCTGGCGCTCCTTTGCCTCCTTaGTGGCTTGTACAAGGACCT +
Preference number: 4 (lower is better)
Translates to: PWFWYRLHEVLFQLTDAGAPLPP*WLVQGP
Trigger: AGGTCCTTGTACAAGCCATCAAGGAGGCAAAGGAGC...GCCAGCATCAGTGAGCTGAAAAAGAACTTCATGGAGTCTGTACCAGAACCACGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643155.1
CDS-3UTR TCA 90 bp CCCTTGTCATGTGGTGTCTTGTGGGGAGAACGGCTCCTAAAAGTCAATTCCTTGGCTCCTTTGCCTCCTTaGTGGCTTGTACAAGGACCT +
Preference number: 4 (lower is better)
Translates to: PLSCGVLWGERLLKVNSLAPLPP*WLVQGP
Trigger: AGGTCCTTGTACAAGCCATCAAGGAGGCAAAGGAGC...CAAGGAATTGACTTTTAGGAGCCGTTCTCCCCACAAGACACCACATGACAAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp TCCAAAGGGGATAAGACTAGGGAGAGACGCGGAAGTCCCACTAAGCTGGCTTTGCCTTGTCATTTGGGATaGAAGAAAGGCCCAGGATCA +
Preference number: 4 (lower is better)
Translates to: SKGDKTRERRGSPTKLALPCHLG*KKGPGS
Trigger: TGATCCTGGGCCTTTCTTTCATCCCAAATGACAAGG...CAAAGCCAGCTTAGTGGGACTTCCGCGTCTCTCCCTAGTCTTATCCCCTTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp GCCACATTCCTTGTCATTTGGGATGAAAGAAAGGCCCAGGATCAGACAGAAGTAACAGACCTCAGCTGGTaGGTGGGAATGAGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: ATFLVIWDERKAQDQTEVTDLSW*VGMSRA
Trigger: AGCCCTGCTCATTCCCACTCACCAGCTGAGGTCTGT...TACTTCTGTCTGATCCTGGGCCTTTCTTTCATCCCAAATGACAAGGAATGTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp CAGCTGACAAGAGTCCTTGGAGGATTTCCCGAAGAATTCCATGGACCCTGTCAGGGCAGAAATTTCCCGTaGGCATCAAAAGGCGTCAGT +
Preference number: 4 (lower is better)
Translates to: QLTRVLGGFPEEFHGPCQGRNFP*ASKGVS
Trigger: ACTGACGCCTTTTGATGCTCACGGGAAATTTCTGCC...CTGACAGGGTCCATGGAATTCTTCGGGAAATCCTCCAAGGACTCTTGTCAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR TCA 90 bp GGGCTCTTTCCCTCCCTCCTGTTGTTCATGTCTCACATGGGTACCAAAAGAAAACAACCAGCCTGGGGCTaGGATCCTGGGCAGAAATTT +
Preference number: 4 (lower is better)
Translates to: GLFPSLLLFMSHMGTKRKQPAWG*DPGQKF
Trigger: AAATTTCTGCCCAGGATCTCAGCCCCAGGCTGGTTG...TTTTCTTTTGGTACCCATGTGAGACATGAACAACAGGAGGGAGGGAAAGAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR TCA 90 bp GAAGCTGGAACTGGGATTCTAAGGAGCCTTGAGGCCAATGTGTTTGTGGGAAGCAAGATTCTGCCAATCTaGTTCTGCTGCCCGAGTTCC +
Preference number: 4 (lower is better)
Translates to: EAGTGILRSLEANVFVGSKILPI*FCCPSS
Trigger: GGAACTCGGGCAGCAGAATCAGATTGGCAGAATCTT...GCTTCCCACAAACACATTGGCCTCAAGGCTCCTTAGAATCCCAGTTCCAGCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR TCA 90 bp AGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAGAAGTTCAATGGGGCCGGAGAATTGCTTaGACCCGGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: RGHHTAITQLKPRTEVQWGRRIA*TREAEV
Trigger: AACCTCTGCCTCCCGGGTTCAAGCAATTCTCCGGCC...CCATTGAACTTCTGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR TCA 90 bp GGCAGGAAAAAGTTGTCTGTCCCTGTACAGCTCAGAAATACTCATAAAAAGGCCGGCCGGAGAATTGCTTaGACCCGGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: GRKKLSVPVQLRNTHKKAGRRIA*TREAEV
Trigger: AACCTCTGCCTCCCGGGTTCAAGCAATTCTCCGGCC...GGCCTTTTTATGAGTATTTCTGAGCTGTACAGGGACAGACAACTTTTTCCTGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR GCA 90 bp CTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGTGCGCCCGCCACTGCTaGAGCCCGACGAACAATGGC +
Preference number: 4 (lower is better)
Translates to: LESLKSDYGRLASLSFCWCARHC*SPTNNG
Trigger: GCCATTGTTCGTCGGGCTGCAGCAGTGGCGGGCGCA...CCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343067.9
ENST00000349460.9
CDS-3UTR GCA 90 bp AAAGTAGAGGTGGCACTTTTTGAGAGACTTGTGATCCTCAGGGATTGGAATAGATCCTGCGCCCGCCACTaGTGCAGCCCGACGAACAAT +
Preference number: 4 (lower is better)
Translates to: KVEVALFERLVILRDWNRSCARH*CSPTNN
Trigger: ATTGTTCGTCGGGCTGCAGCAGTGGCGGGCGCAGGA...TCTATTCCAATCCCTGAGGATCACAAGTCTCTCAAAAAGTGCCACCTCTACTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644600.1
CDS-3UTR GCA 90 bp AGAAGTCAACATGCAAACAGAGGACACATACTTGTCACAAGTGAACTTGAGGTCTCCTGCGCCCGCCACTaGTGCAGCCCGACGAACAAT +
Preference number: 4 (lower is better)
Translates to: RSQHANRGHILVTSELEVSCARH*CSPTNN
Trigger: ATTGTTCGTCGGGCTGCAGCAGTGGCGGGCGCAGGA...GACCTCAAGTTCACTTGTGACAAGTATGTGTCCTCTGTTTGCATGTTGACTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644600.1
ENST00000644780.1
ENST00000650265.1
CDS-3UTR GCA 90 bp AGTTCTCAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTCCTATAATTGCATCCTGCGCCCGCCACTaGTGCAGCCCGACGAACAAT +
Preference number: 4 (lower is better)
Translates to: SSQRLIIYWWLQIAPIIASCARH*CSPTNN
Trigger: ATTGTTCGTCGGGCTGCAGCAGTGGCGGGCGCAGGA...TGCAATTATAGGAGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTGAGAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000645184.1
ENST00000648181.1
ENST00000648891.1
CDS-3UTR GCA 90 bp ACTATCAAGATCAGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACATCCTGCGCCCGCCACTaGTGCAGCCCGACGAACAAT +
Preference number: 4 (lower is better)
Translates to: TIKIRGHHTAITQLKPRTSCARH*CSPTNN
Trigger: ATTGTTCGTCGGGCTGCAGCAGTGGCGGGCGCAGGA...TGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCTGATCTTGATAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644600.1
ENST00000644780.1
ENST00000650265.1
CDS-3UTR GCA 90 bp GCCCAGGCTGGTCTTAAACTACTGGACTCAAGTGATCTGCCTGTCTTGGCCTCCTCTTCCTTCTGTTGGTaGTGTGAATTTTCGGCCTCA +
Preference number: 4 (lower is better)
Translates to: AQAGLKLLDSSDLPVLASSSFCW*CEFSAS
Trigger: TGAGGCCGAAAATTCACAGCACCAACAGAAGGAAGA...GGAGGCCAAGACAGGCAGATCACTTGAGTCCAGTAGTTTAAGACCAGCCTGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000645184.1
ENST00000648181.1
CDS-3UTR GCA 90 bp CAGCTGACAAGAGTCCTTGGAGGATTTCCCGAAGAATTCCATGGACCCTGTCAGGTCGTGAAAGTCCTCTaGTTTCTGATGTCCGCTCCT +
Preference number: 4 (lower is better)
Translates to: QLTRVLGGFPEEFHGPCQVVKVL*FLMSAP
Trigger: AGGAGCGGACATCAGAAAGCAGAGGACTTTCACGAC...CTGACAGGGTCCATGGAATTCTTCGGGAAATCCTCCAAGGACTCTTGTCAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp GCATCTTTCCGAGGTCTGTGGATCAGGGCTGGTGCCCTCCCTGGCATTCTGATACCAACAAAGAAACCTTaGAGTGCATGTTCCTGTGTT +
Preference number: 4 (lower is better)
Translates to: ASFRGLWIRAGALPGILIPTKKP*SACSCV
Trigger: AACACAGGAACATGCACTGCAAGGTTTCTTTGTTGG...TATCAGAATGCCAGGGAGGGCACCAGCCCTGATCCACAGACCTCGGAAAGATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp CAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAATACAACAGGGCAGACGTCCTaGAACTATGTCCTGCCGAAG +
Preference number: 4 (lower is better)
Translates to: QKSWLWAVHCYSFVPHNTTGQTS*NYVLPK
Trigger: CTTCGGCAGGACATAGTTGCAGGACGTCTGCCCTGT...TGTATTGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR GCA 90 bp AGCTGCAGAGACAGTTCTCAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTACAGGGCAGACGTCCTaGAACTATGTCCTGCCGAAG +
Preference number: 4 (lower is better)
Translates to: SCRDSSQRLIIYWWLQIATGQTS*NYVLPK
Trigger: CTTCGGCAGGACATAGTTGCAGGACGTCTGCCCTGT...AGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTGAGAACTGTCTCTGCAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648181.1
ENST00000648891.1
CDS-3UTR GCA 90 bp GCATCTTTCCGAGGTCTGTGGATCAGGGCTGGTGCCCTCCCTGGCATTCTGATAGACCTGTATGACTTATaGAGTTCCATGACCTTCTCT +
Preference number: 4 (lower is better)
Translates to: ASFRGLWIRAGALPGILIDLYDL*SSMTFS
Trigger: AGAGAAGGTCATGGAACTGCATAAGTCATACAGGTC...TATCAGAATGCCAGGGAGGGCACCAGCCCTGATCCACAGACCTCGGAAAGATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp GCATCTTTCCGAGGTCTGTGGATCAGGGCTGGTGCCCTCCCTGGCATTCTGATACTAGCGCAAGAAATTTaGTTTTGGGAATGGTGTCTG +
Preference number: 4 (lower is better)
Translates to: ASFRGLWIRAGALPGILILAQEI*FWEWCL
Trigger: CAGACACCATTCCCAAAAGCAAATTTCTTGCGCTAG...TATCAGAATGCCAGGGAGGGCACCAGCCCTGATCCACAGACCTCGGAAAGATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp GGTAGCTCTTCCTACAGGCCATCTGGCCATCAGGCAGTGGGCATGCACTACATGCTAGCGCAAGAAATTTaGTTTTGGGAATGGTGTCTG +
Preference number: 4 (lower is better)
Translates to: GSSSYRPSGHQAVGMHYMLAQEI*FWEWCL
Trigger: CAGACACCATTCCCAAAAGCAAATTTCTTGCGCTAG...CATGTAGTGCATGCCCACTGCCTGATGGCCAGATGGCCTGTAGGAAGAGCTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR GCA 90 bp GGGCTCTTTCCCTCCCTCCTGTTGTTCATGTCTCACATGGGTACCAAAAGAAAAGGACGCCCGTTTACTTaGTGTACGCTCGAAGTGTGG +
Preference number: 4 (lower is better)
Translates to: GLFPSLLLFMSHMGTKRKGRPFT*CTLEVW
Trigger: CCACACTTCGAGCGTACAGCAAGTAAACGGGCGTCC...TTTTCTTTTGGTACCCATGTGAGACATGAACAACAGGAGGGAGGGAAAGAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp AGGCCGTGGTTCTGGTACAGACTCCATGAAGTTCTTTTTCAGCTCACTGATGCTGGACGCCCGTTTACTTaGTGTACGCTCGAAGTGTGG +
Preference number: 4 (lower is better)
Translates to: RPWFWYRLHEVLFQLTDAGRPFT*CTLEVW
Trigger: CCACACTTCGAGCGTACAGCAAGTAAACGGGCGTCC...AGCATCAGTGAGCTGAAAAAGAACTTCATGGAGTCTGTACCAGAACCACGGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
CDS-3UTR GCA 90 bp AGCTGCAGAGACAGTTCTCAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTGGACGCCCGTTTACTTaGTGTACGCTCGAAGTGTGG +
Preference number: 4 (lower is better)
Translates to: SCRDSSQRLIIYWWLQIAGRPFT*CTLEVW
Trigger: CCACACTTCGAGCGTACAGCAAGTAAACGGGCGTCC...AGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTGAGAACTGTCTCTGCAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648181.1
ENST00000648891.1
CDS-3UTR GCA 90 bp AAAAATGCACACACCCGAAATGAGTTCAAACCAGCCGAAACAAAACTCAGGCAGCCGAGGACTTCGGTCTaGCGAATCGACAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: KNAHTRNEFKPAETKLRQPRTSV*RIDSCC
Trigger: GCAGCAGCTGTCGATTCGGCAGACCGAAGTCCTCGG...CTGCCTGAGTTTTGTTTCGGCTGGTTTGAACTCATTTCGGGTGTGTGCATTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp CAGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAGAAGTTCAATGGGCTCTGGCTCAGCTTaGTCAGGTGGCTCGTCTTCC +
Preference number: 4 (lower is better)
Translates to: QRASYSNNTVEAKDRSSMGSGSA*SGGSSS
Trigger: GGAAGACGAGCCACCTGAGCAAGCTGAGCCAGAGCC...CATTGAACTTCTGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR GCA 90 bp TCTATACACCAGGCAGGAAAAAGTTGTCTGTCCCTGTACAGCTCAGAAATACTCGGCTCTGGCTCAGCTTaGTCAGGTGGCTCGTCTTCC +
Preference number: 4 (lower is better)
Translates to: SIHQAGKSCLSLYSSEILGSGSA*SGGSSS
Trigger: GGAAGACGAGCCACCTGAGCAAGCTGAGCCAGAGCC...GAGTATTTCTGAGCTGTACAGGGACAGACAACTTTTTCCTGCCTGGTGTATAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR GCA 90 bp CCAACACAGCTGACAAGAGTCCTTGGAGGATTTCCCGAAGAATTCCATGGACCCTTTTTCCACCTTCCATaGTTCTGTGGGCTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: PTQLTRVLGGFPEEFHGPFFHLP*FCGLWL
Trigger: GAGCCAGAGCCCACAGAAGCATGGAAGGTGGAAAAA...GGGTCCATGGAATTCTTCGGGAAATCCTCCAAGGACTCTTGTCAGCTGTGTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
CDS-3UTR GCA 90 bp CCCTTGTCATGTGGTGTCTTGTGGGGAGAACGGCTCCTAAAAGTCAATTCCTTGTGGGTGCTGCTCCTTTaGCTCCTTGATGGCTTGTAC +
Preference number: 4 (lower is better)
Translates to: PLSCGVLWGERLLKVNSLWVLLL*LLDGLY
Trigger: GTACAAGCCATCAAGGAGGCAAAGGAGCAGCACCCA...CAAGGAATTGACTTTTAGGAGCCGTTCTCCCCACAAGACACCACATGACAAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp CCCTTGTCATGTGGTGTCTTGTGGGGAGAACGGCTCCTAAAAGTCAATTCCTTGGACATGTCTGGGTGCTaGTCCTTTGCCTCCTTGATG +
Preference number: 4 (lower is better)
Translates to: PLSCGVLWGERLLKVNSLDMSGC*SFASLM
Trigger: CATCAAGGAGGCAAAGGAGCAGCACCCAGACATGTC...CAAGGAATTGACTTTTAGGAGCCGTTCTCCCCACAAGACACCACATGACAAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp TCCAAAGGGGATAAGACTAGGGAGAGACGCGGAAGTCCCACTAAGCTGGCTTTGTTTAGACATTTCTCTTaGTCACTGCCCTTGAGCCCC +
Preference number: 4 (lower is better)
Translates to: SKGDKTRERRGSPTKLALFRHFS*SLPLSP
Trigger: GGGGCTCAAGGGCAGTGAGCAAGAGAAATGTCTAAA...CAAAGCCAGCTTAGTGGGACTTCCGCGTCTCTCCCTAGTCTTATCCCCTTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp CCAACACAGCTGACAAGAGTCCTTGGAGGATTTCCCGAAGAATTCCATGGACCCAACCCCAAGAACTGTTaGCAGAGATGGAGGAAAGGG +
Preference number: 4 (lower is better)
Translates to: PTQLTRVLGGFPEEFHGPNPKNC*QRWRKG
Trigger: CCCTTTCCTCCATCTCTGGCAACAGTTCTTGGGGTT...GGGTCCATGGAATTCTTCGGGAAATCCTCCAAGGACTCTTGTCAGCTGTGTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR GCA 90 bp GGGCTCTTTCCCTCCCTCCTGTTGTTCATGTCTCACATGGGTACCAAAAGAAAATGCTTTGTGGGTGGGTaGCAGAGTCCTCATGTGGCT +
Preference number: 4 (lower is better)
Translates to: GLFPSLLLFMSHMGTKRKCFVGG*QSPHVA
Trigger: AGCCACATGAGGACTCTGGCACCCACCCACAAAGCA...TTTTCTTTTGGTACCCATGTGAGACATGAACAACAGGAGGGAGGGAAAGAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR GCA 90 bp CAGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAGAAGTTCAATGCCGAGGACTTCGGTCTaGCGAATCGACAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: QRASYSNNTVEAKDRSSMPRTSV*RIDSCS
Trigger: GGAGCAGCTGTCGATTCGGCAGACCGAAGTCCTCGG...CATTGAACTTCTGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636666.1
ENST00000644342.1
CDS-3UTR GCA 90 bp GTCCAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAAGGTTCCTGCCACTTTaGCCCGCCGGGGCCTCCACC +
Preference number: 4 (lower is better)
Translates to: VQLRSFYSPCNFCTLLSIRFLPL*PAGAST
Trigger: GGTGGAGGCCCCGGCGGGGCAAAGTGGCAGGAACCT...TATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000644342.1
ENST00000646800.1
CDS-3UTR GCA 90 bp GAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGTTTAGGTTCCTGCCACTTTaGCCCGCCGGGGCCTCCACC +
Preference number: 4 (lower is better)
Translates to: ESLKSDYGRLASLSFCWFRFLPL*PAGAST
Trigger: GGTGGAGGCCCCGGCGGGGCAAAGTGGCAGGAACCT...AAACCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642937.2
ENST00000647103.1
CDS-3UTR GCA 90 bp TCTATACACCAGGCAGGAAAAAGTTGTCTGTCCCTGTACAGCTCAGAAATACTCCCTTTAAGAGGTTCCTaGCACTTTGCCCCGCCGGGG +
Preference number: 4 (lower is better)
Translates to: SIHQAGKSCLSLYSSEILPLRGS*HFAPPG
Trigger: CCCCGGCGGGGCAAAGTGGCAGGAACCTCTTAAAGG...GAGTATTTCTGAGCTGTACAGGGACAGACAACTTTTTCCTGCCTGGTGTATAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000644342.1
ENST00000646189.1
ENST00000646800.1
CDS-3UTR GCA 90 bp AGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAGAAGTTCAATGGCCTTTAAGAGGTTCCTaGCACTTTGCCCCGCCGGGG +
Preference number: 4 (lower is better)
Translates to: RGHHTAITQLKPRTEVQWPLRGS*HFAPPG
Trigger: CCCCGGCGGGGCAAAGTGGCAGGAACCTCTTAAAGG...CCATTGAACTTCTGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000644342.1
ENST00000646189.1
ENST00000646800.1
CDS-3UTR GCA 90 bp AAAGTAGAGGTGGCACTTTTTGAGAGACTTGTGATCCTCAGGGATTGGAATAGACTGAGATCGCGCCACTaGACTCCAGCCTGGGGGACA +
Preference number: 4 (lower is better)
Translates to: KVEVALFERLVILRDWNRLRSRH*TPAWGT
Trigger: TGTCCCCCAGGCTGGAGTGCAGTGGCGCGATCTCAG...TCTATTCCAATCCCTGAGGATCACAAGTCTCTCAAAAAGTGCCACCTCTACTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR CCA 90 bp AGGTGCAGAAGTGGGCCGAGGACTTCGGTCTGCCGAATCGACAGCTGCTGCTCCTCTCTTCATCAAGACTaGTTCCAAATTCTATCTCTT +
Preference number: 4 (lower is better)
Translates to: RCRSGPRTSVCRIDSCCSSLHQD*FQILSL
Trigger: AAGAGATAGAATTTGGAACCAGTCTTGATGAAGAGA...GGAGCAGCAGCTGTCGATTCGGCAGACCGAAGTCCTCGGCCCACTTCTGCACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
CDS-3UTR CCA 90 bp GGTAGCTCTTCCTACAGGCCATCTGGCCATCAGGCAGTGGGCATGCACTACATGATGAAGATCCAAAGATaGGTCTGTTTTGAGTTCCGG +
Preference number: 4 (lower is better)
Translates to: GSSSYRPSGHQAVGMHYMMKIQR*VCFEFR
Trigger: CCGGAACTCAAAACAGACCCATCTTTGGATCTTCAT...CATGTAGTGCATGCCCACTGCCTGATGGCCAGATGGCCTGTAGGAAGAGCTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR CCA 90 bp GCATCTTTCCGAGGTCTGTGGATCAGGGCTGGTGCCCTCCCTGGCATTCTGATAATGAAGATCCAAAGATaGGTCTGTTTTGAGTTCCGG +
Preference number: 4 (lower is better)
Translates to: ASFRGLWIRAGALPGILIMKIQR*VCFEFR
Trigger: CCGGAACTCAAAACAGACCCATCTTTGGATCTTCAT...TATCAGAATGCCAGGGAGGGCACCAGCCCTGATCCACAGACCTCGGAAAGATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp CGAATCGACAGCTGCTGCTCCATCGAGGCTCCGGGACGCCCGTTTACTTGCTGTTTGCGTTATCCCAAATaGCTAGACCAAAATAGTCTT +
Preference number: 4 (lower is better)
Translates to: RIDSCCSIEAPGRPFTCCLRYPK*LDQNSL
Trigger: AAGACTATTTTGGTCTAGCCATTTGGGATAACGCAA...ACAGCAAGTAAACGGGCGTCCCGGAGCCTCGATGGAGCAGCAGCTGTCGATTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
CDS-3UTR CCA 90 bp AGCTGCTGCTCCATCGAGGCTCCGGGACGCCCGTTTACTTGCTGTACGCTCGAATTGCGTTATCCCAAATaGCTAGACCAAAATAGTCTT +
Preference number: 4 (lower is better)
Translates to: SCCSIEAPGRPFTCCTLELRYPK*LDQNSL
Trigger: AAGACTATTTTGGTCTAGCCATTTGGGATAACGCAA...TTCGAGCGTACAGCAAGTAAACGGGCGTCCCGGAGCCTCGATGGAGCAGCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
CDS-3UTR CCA 90 bp AGCTGCTGCTCCATCGAGGCTCCGGGACGCCCGTTTACTTGCTGTACGCTCGAACTGTGCTGGGTCAGGTaGATAAAACTTTACATTAAA +
Preference number: 4 (lower is better)
Translates to: SCCSIEAPGRPFTCCTLELCWVR*IKLYIK
Trigger: TTTAATGTAAAGTTTTATCCACCTGACCCAGCACAG...TTCGAGCGTACAGCAAGTAAACGGGCGTCCCGGAGCCTCGATGGAGCAGCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
CDS-3UTR CCA 90 bp CAGAAGTGGGCCGAGGACTTCGGTCTGCCGAATCGACAGCTGCTGCTCCATCGACTGTGCTGGGTCAGGTaGATAAAACTTTACATTAAA +
Preference number: 4 (lower is better)
Translates to: QKWAEDFGLPNRQLLLHRLCWVR*IKLYIK
Trigger: TTTAATGTAAAGTTTTATCCACCTGACCCAGCACAG...TCGATGGAGCAGCAGCTGTCGATTCGGCAGACCGAAGTCCTCGGCCCACTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
CDS-3UTR CCA 90 bp CAATTGGTCATGTGGACAAAGTACTCACTCCTTCTCCTGTGGGGATTTGCCCATCACGCCATGGAGTTCTaGGTCGTAGTCTCCCAGTTC +
Preference number: 4 (lower is better)
Translates to: QLVMWTKYSLLLLWGFAHHAMEF*VVVSQF
Trigger: GAACTGGGAGACTACGACCCAGAACTCCATGGCGTG...ATGGGCAAATCCCCACAGGAGAAGGAGTGAGTACTTTGTCCACATGACCAATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642643.1
ENST00000648891.1
CDS-3UTR CCA 90 bp TCCAAAGGGGATAAGACTAGGGAGAGACGCGGAAGTCCCACTAAGCTGGCTTTGCCTGAGCTGGAGTCATaGACCTGTATGACTTATGCA +
Preference number: 4 (lower is better)
Translates to: SKGDKTRERRGSPTKLALPELES*TCMTYA
Trigger: TGCATAAGTCATACAGGTCCATGACTCCAGCTCAGG...CAAAGCCAGCTTAGTGGGACTTCCGCGTCTCTCCCTAGTCTTATCCCCTTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp AGCTGCTGCTCCATCGAGGCTCCGGGACGCCCGTTTACTTGCTGTACGCTCGAACACTGTATCGAAATTTaGATCCTAGCGCAAGAAATT +
Preference number: 4 (lower is better)
Translates to: SCCSIEAPGRPFTCCTLEHCIEI*ILAQEI
Trigger: AATTTCTTGCGCTAGGATCCAAATTTCGATACAGTG...TTCGAGCGTACAGCAAGTAAACGGGCGTCCCGGAGCCTCGATGGAGCAGCAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
CDS-3UTR CCA 90 bp CCAACACAGCTGACAAGAGTCCTTGGAGGATTTCCCGAAGAATTCCATGGACCCCTCAGCTTGCTCAGGTaGCTCGTCTTCCTTTTTCAC +
Preference number: 4 (lower is better)
Translates to: PTQLTRVLGGFPEEFHGPLSLLR*LVFLFH
Trigger: GTGAAAAAGGAAGACGAGCCACCTGAGCAAGCTGAG...GGGTCCATGGAATTCTTCGGGAAATCCTCCAAGGACTCTTGTCAGCTGTGTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp AGCTGCAGAGACAGTTCTCAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTCCTTCCATGCTTCTGTaGGCTCTGGCTCAGCTTGCT +
Preference number: 4 (lower is better)
Translates to: SCRDSSQRLIIYWWLQIAPSMLL*ALAQLA
Trigger: AGCAAGCTGAGCCAGAGCCCACAGAAGCATGGAAGG...AGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTGAGAACTGTCTCTGCAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648181.1
ENST00000648891.1
CDS-3UTR CCA 90 bp CAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAATACACCTTCCATGCTTCTGTaGGCTCTGGCTCAGCTTGCT +
Preference number: 4 (lower is better)
Translates to: QKSWLWAVHCYSFVPHNTPSMLL*ALAQLA
Trigger: AGCAAGCTGAGCCAGAGCCCACAGAAGCATGGAAGG...TGTATTGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CCA 90 bp GAAGCTGGAACTGGGATTCTAAGGAGCCTTGAGGCCAATGTGTTTGTGGGAAGCGGTCACCATTTGAGGTaGGTACTGTCACCTCGATGT +
Preference number: 4 (lower is better)
Translates to: EAGTGILRSLEANVFVGSGHHLR*VLSPRC
Trigger: ACATCGAGGTGACAGTACCCACCTCAAATGGTGACC...GCTTCCCACAAACACATTGGCCTCAAGGCTCCTTAGAATCCCAGTTCCAGCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
CDS-3UTR CCA 90 bp CAGCTGACAAGAGTCCTTGGAGGATTTCCCGAAGAATTCCATGGACCCTGTCAGCCATTCACTAGGCCGTaGTTCTGGTACAGACTCCAT +
Preference number: 4 (lower is better)
Translates to: QLTRVLGGFPEEFHGPCQPFTRP*FWYRLH
Trigger: ATGGAGTCTGTACCAGAACCACGGCCTAGTGAATGG...CTGACAGGGTCCATGGAATTCTTCGGGAAATCCTCCAAGGACTCTTGTCAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR CCA 90 bp GAAGCTGGAACTGGGATTCTAAGGAGCCTTGAGGCCAATGTGTTTGTGGGAAGCTGTCAGCAAGACTCCTaGGTCCAAGTCTCCACTGTT +
Preference number: 4 (lower is better)
Translates to: EAGTGILRSLEANVFVGSCQQDS*VQVSTV
Trigger: AACAGTGGAGACTTGGACCCAGGAGTCTTGCTGACA...GCTTCCCACAAACACATTGGCCTCAAGGCTCCTTAGAATCCCAGTTCCAGCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp CCAACACAGCTGACAAGAGTCCTTGGAGGATTTCCCGAAGAATTCCATGGACCCTGTCAGCAAGACTCCTaGGTCCAAGTCTCCACTGTT +
Preference number: 4 (lower is better)
Translates to: PTQLTRVLGGFPEEFHGPCQQDS*VQVSTV
Trigger: AACAGTGGAGACTTGGACCCAGGAGTCTTGCTGACA...GGGTCCATGGAATTCTTCGGGAAATCCTCCAAGGACTCTTGTCAGCTGTGTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp GTTGGGAGAAGCAGCTTTAGACATTTCTCTTGCTCACTGCCCTTGAGCCCCAGTTGTGGTGGTGCTGCTTaGGGTCTCAGATGTGATAGT +
Preference number: 4 (lower is better)
Translates to: VGRSSFRHFSCSLPLSPSCGGAA*GLRCDS
Trigger: ACTATCACATCTGAGACCCCAAGCAGCACCACCACA...ACTGGGGCTCAAGGGCAGTGAGCAAGAGAAATGTCTAAAGCTGCTTCTCCCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp GAAGCTGGAACTGGGATTCTAAGGAGCCTTGAGGCCAATGTGTTTGTGGGAAGCTGTGGTGGTGCTGCTTaGGGTCTCAGATGTGATAGT +
Preference number: 4 (lower is better)
Translates to: EAGTGILRSLEANVFVGSCGGAA*GLRCDS
Trigger: ACTATCACATCTGAGACCCCAAGCAGCACCACCACA...GCTTCCCACAAACACATTGGCCTCAAGGCTCCTTAGAATCCCAGTTCCAGCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp TCCAAAGGGGATAAGACTAGGGAGAGACGCGGAAGTCCCACTAAGCTGGCTTTGTCCCGAAGAATTCCATaGACCCTGTCAGTGTCTGTT +
Preference number: 4 (lower is better)
Translates to: SKGDKTRERRGSPTKLALSRRIP*TLSVSV
Trigger: AACAGACACTGACAGGGTCCATGGAATTCTTCGGGA...CAAAGCCAGCTTAGTGGGACTTCCGCGTCTCTCCCTAGTCTTATCCCCTTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp CCAACACAGCTGACAAGAGTCCTTGGAGGATTTCCCGAAGAATTCCATGGACCCCCACTAAGCTGGCTTTaGCTTCCAACACAGCTGACA +
Preference number: 4 (lower is better)
Translates to: PTQLTRVLGGFPEEFHGPPLSWL*LPTQLT
Trigger: TGTCAGCTGTGTTGGAAGCCAAAGCCAGCTTAGTGG...GGGTCCATGGAATTCTTCGGGAAATCCTCCAAGGACTCTTGTCAGCTGTGTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp CAGCTGACAAGAGTCCTTGGAGGATTTCCCGAAGAATTCCATGGACCCTGTCAGGAAGTCCCACTAAGCTaGCTTTGGCTTCCAACACAG +
Preference number: 4 (lower is better)
Translates to: QLTRVLGGFPEEFHGPCQEVPLS*LWLPTQ
Trigger: CTGTGTTGGAAGCCAAAGCCAGCTTAGTGGGACTTC...CTGACAGGGTCCATGGAATTCTTCGGGAAATCCTCCAAGGACTCTTGTCAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp GAAGCTGGAACTGGGATTCTAAGGAGCCTTGAGGCCAATGTGTTTGTGGGAAGCGAAGTCCCACTAAGCTaGCTTTGGCTTCCAACACAG +
Preference number: 4 (lower is better)
Translates to: EAGTGILRSLEANVFVGSEVPLS*LWLPTQ
Trigger: CTGTGTTGGAAGCCAAAGCCAGCTTAGTGGGACTTC...GCTTCCCACAAACACATTGGCCTCAAGGCTCCTTAGAATCCCAGTTCCAGCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp GGGCTCTTTCCCTCCCTCCTGTTGTTCATGTCTCACATGGGTACCAAAAGAAAAGGCTGGTGCCCTCCCTaGCATTCTGATACACTCACA +
Preference number: 4 (lower is better)
Translates to: GLFPSLLLFMSHMGTKRKGWCPP*HSDTLT
Trigger: TGTGAGTGTATCAGAATGCCAGGGAGGGCACCAGCC...TTTTCTTTTGGTACCCATGTGAGACATGAACAACAGGAGGGAGGGAAAGAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp CTAGGGAGAGACGCGGAAGTCCCACTAAGCTGGCTTTGGCTTCCAACACAGCTGTTTTTCTGTGAGATTTaGTCTCCTGAGATGGGAGCT +
Preference number: 4 (lower is better)
Translates to: LGRDAEVPLSWLWLPTQLFFCEI*SPEMGA
Trigger: AGCTCCCATCTCAGGAGACCAAATCTCACAGAAAAA...CAGCTGTGTTGGAAGCCAAAGCCAGCTTAGTGGGACTTCCGCGTCTCTCCCTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp CTAGGGAGAGACGCGGAAGTCCCACTAAGCTGGCTTTGGCTTCCAACACAGCTGACATTCCTTGTCATTTaGGATGAAAGAAAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: LGRDAEVPLSWLWLPTQLTFLVI*DERKAQ
Trigger: CTGGGCCTTTCTTTCATCCCAAATGACAAGGAATGT...CAGCTGTGTTGGAAGCCAAAGCCAGCTTAGTGGGACTTCCGCGTCTCTCCCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp CAGCTGACAAGAGTCCTTGGAGGATTTCCCGAAGAATTCCATGGACCCTGTCAGATACCCCTTGTCATGTaGTGTCTTGTGGGGAGAACG +
Preference number: 4 (lower is better)
Translates to: QLTRVLGGFPEEFHGPCQIPLVM*CLVGRT
Trigger: CGTTCTCCCCACAAGACACCACATGACAAGGGGTAT...CTGACAGGGTCCATGGAATTCTTCGGGAAATCCTCCAAGGACTCTTGTCAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp GGGCTCTTTCCCTCCCTCCTGTTGTTCATGTCTCACATGGGTACCAAAAGAAAAGGGAATGAGCAGGGCTaGGGCTTATACCCCTTGTCA +
Preference number: 4 (lower is better)
Translates to: GLFPSLLLFMSHMGTKRKGNEQG*GLYPLS
Trigger: TGACAAGGGGTATAAGCCCCAGCCCTGCTCATTCCC...TTTTCTTTTGGTACCCATGTGAGACATGAACAACAGGAGGGAGGGAAAGAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp GCCACATTCCTTGTCATTTGGGATGAAAGAAAGGCCCAGGATCAGACAGAAGTAATTTGCTGGGCGTGGTaGTGTGCGCCTGTCATCCCA +
Preference number: 4 (lower is better)
Translates to: ATFLVIWDERKAQDQTEVICWAW*CAPVIP
Trigger: TGGGATGACAGGCGCACACCACCACGCCCAGCAAAT...TACTTCTGTCTGATCCTGGGCCTTTCTTTCATCCCAAATGACAAGGAATGTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp AAAAATGCACACACCCGAAATGAGTTCAAACCAGCCGAAACAAAACTCAGGCAGGTCAGGCCGCAGCTCTaGCTCCAGTTCCCGAGGTTT +
Preference number: 4 (lower is better)
Translates to: KNAHTRNEFKPAETKLRQVRPQL*LQFPRF
Trigger: AAACCTCGGGAACTGGAGCCAGAGCTGCGGCCTGAC...CTGCCTGAGTTTTGTTTCGGCTGGTTTGAACTCATTTCGGGTGTGTGCATTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR CCA 90 bp CAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAATACAAATTTCAGTCCTGGCTaGAGGCTAAGGGGCACCAGC +
Preference number: 4 (lower is better)
Translates to: QKSWLWAVHCYSFVPHNTNFSPG*RLRGTS
Trigger: GCTGGTGCCCCTTAGCCTCCAGCCAGGACTGAAATT...TGTATTGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CCA 90 bp CAATGCAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAGTAGCTAGGGGACTCTaGCCCACCAACCTTTCTTTC +
Preference number: 4 (lower is better)
Translates to: QCRKAGFGQSIATPLYPTVARGL*PTNLSF
Trigger: GAAAGAAAGGTTGGTGGGCCAGAGTCCCCTAGCTAC...TGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTGCATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000643173.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
CDS-3UTR CCA 90 bp TTGGATCCTAGCGCAAGAAATTTGCTTTTGGGAATGGTGTCTGTAGATGTCAATGTGAGCCACCACGCCTaGCACTGGACCTCCCCAGCA +
Preference number: 4 (lower is better)
Translates to: LDPSARNLLLGMVSVDVNVSHHA*HWTSPA
Trigger: TGCTGGGGAGGTCCAGTGCCAGGCGTGGTGGCTCAC...ATTGACATCTACAGACACCATTCCCAAAAGCAAATTTCTTGCGCTAGGATCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642643.1
CDS-3UTR CCA 90 bp AGCTGCAGAGACAGTTCTCAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTAGCCCCCTGAGTAGCTaGACTACACAGGTGTACACC +
Preference number: 4 (lower is better)
Translates to: SCRDSSQRLIIYWWLQIASPLSS*TTQVYT
Trigger: GGTGTACACCTGTGTAGTCCAGCTACTCAGGGGGCT...AGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTGAGAACTGTCTCTGCAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000645184.1
ENST00000648181.1
CDS-3UTR TCA 90 bp GAAGTCAACATGCAAACAGAGGACACATACTTGTCACAAGTGAACTTGAGGTCACTGCTGCTGGCTGACTaGCTAAACGCACCAGCGGAG +
Preference number: 4 (lower is better)
Translates to: EVNMQTEDTYLSQVNLRSLLLAD*LNAPAE
Trigger: CTCCGCTGGTGCGTTTAGTCAGTCAGCCAGCAGCAG...TGACCTCAAGTTCACTTGTGACAAGTATGTGTCCTCTGTTTGCATGTTGACTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644600.1
ENST00000644780.1
ENST00000650265.1
CDS-3UTR TCA 90 bp CAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTCCTATAATTGCACTGGGTTCTTCTCTGTTGTCATaGTGTTGCGGTGGCTCCGGG +
Preference number: 4 (lower is better)
Translates to: QRLIIYWWLQIAPIIALGSSLLS*CCGGSG
Trigger: CCCGGAGCCACCGCAACATCATGACAACAGAGAAGA...ACCCAGTGCAATTATAGGAGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000645184.1
ENST00000648891.1
CDS-3UTR TCA 90 bp GTTGGGAGAAGCAGCTTTAGACATTTCTCTTGCTCACTGCCCTTGAGCCCCAGTAAGTCCTCTGCTTTCTaGTGTCCGCTCCTTGTTCTT +
Preference number: 4 (lower is better)
Translates to: VGRSSFRHFSCSLPLSPSKSSAF*CPLLVL
Trigger: AAGAACAAGGAGCGGACATCAGAAAGCAGAGGACTT...ACTGGGGCTCAAGGGCAGTGAGCAAGAGAAATGTCTAAAGCTGCTTCTCCCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp CCAACACAGCTGACAAGAGTCCTTGGAGGATTTCCCGAAGAATTCCATGGACCCAAGTCCTCTGCTTTCTaGTGTCCGCTCCTTGTTCTT +
Preference number: 4 (lower is better)
Translates to: PTQLTRVLGGFPEEFHGPKSSAF*CPLLVL
Trigger: AAGAACAAGGAGCGGACATCAGAAAGCAGAGGACTT...GGGTCCATGGAATTCTTCGGGAAATCCTCCAAGGACTCTTGTCAGCTGTGTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp GCTCAGCTTGCTCAGGTGGCTCGTCTTCCTTTTTCACTTCAGCCTTCACTGTTTTCTTCCTCGGACACCTaGGATTTGGGCCTTTTGAGA +
Preference number: 4 (lower is better)
Translates to: AQLAQVARLPFSLQPSLFSSSDT*DLGLLR
Trigger: TCTCAAAAGGCCCAAATCTCAGGTGTCCGAGGAAGA...AAACAGTGAAGGCTGAAGTGAAAAAGGAAGACGAGCCACCTGAGCAAGCTGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
CDS-3UTR TCA 90 bp CAGCTGACAAGAGTCCTTGGAGGATTTCCCGAAGAATTCCATGGACCCTGTCAGAATCTGGATCTTCTCTaGGTTCTTCCTGAGCAGGCT +
Preference number: 4 (lower is better)
Translates to: QLTRVLGGFPEEFHGPCQNLDLL*VLPEQA
Trigger: AGCCTGCTCAGGAAGAACTCAGAGAAGATCCAGATT...CTGACAGGGTCCATGGAATTCTTCGGGAAATCCTCCAAGGACTCTTGTCAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp GAAGCTGGAACTGGGATTCTAAGGAGCCTTGAGGCCAATGTGTTTGTGGGAAGCAATCTGGATCTTCTCTaGGTTCTTCCTGAGCAGGCT +
Preference number: 4 (lower is better)
Translates to: EAGTGILRSLEANVFVGSNLDLL*VLPEQA
Trigger: AGCCTGCTCAGGAAGAACTCAGAGAAGATCCAGATT...GCTTCCCACAAACACATTGGCCTCAAGGCTCCTTAGAATCCCAGTTCCAGCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp GCATCTTTCCGAGGTCTGTGGATCAGGGCTGGTGCCCTCCCTGGCATTCTGATACTTCTTCCAAAAGATTaGGATGCTCACATACTCGTT +
Preference number: 4 (lower is better)
Translates to: ASFRGLWIRAGALPGILILLPKD*DAHILV
Trigger: AACGAGTATGTGAGCATCTCAATCTTTTGGAAGAAG...TATCAGAATGCCAGGGAGGGCACCAGCCCTGATCCACAGACCTCGGAAAGATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp TCCAAAGGGGATAAGACTAGGGAGAGACGCGGAAGTCCCACTAAGCTGGCTTTGTCAAGTTCCTTGGTCTaGTTCGGGGCCAGTTTAAAA +
Preference number: 4 (lower is better)
Translates to: SKGDKTRERRGSPTKLALSSSLV*FGASLK
Trigger: TTTTAAACTGGCCCCGAATCAGACCAAGGAACTTGA...CAAAGCCAGCTTAGTGGGACTTCCGCGTCTCTCCCTAGTCTTATCCCCTTTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp CTCTGGCTCAGCTTGCTCAGGTGGCTCGTCTTCCTTTTTCACTTCAGCCTTCACAGTCATGGACCTGTATaGCTTATGCAGTTCCATGAC +
Preference number: 4 (lower is better)
Translates to: LWLSLLRWLVFLFHFSLHSHGPV*LMQFHD
Trigger: GTCATGGAACTGCATAAGTCATACAGGTCCATGACT...GTGAAGGCTGAAGTGAAAAAGGAAGACGAGCCACCTGAGCAAGCTGAGCCAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
CDS-3UTR TCA 90 bp GCCCAGGCTGGTCTTAAACTACTGGACTCAAGTGATCTGCCTGTCTTGGCCTCCGGTAACTGGGAAGTTTaGATCCGATGGTACTTTCAT +
Preference number: 4 (lower is better)
Translates to: AQAGLKLLDSSDLPVLASGNWEV*IRWYFH
Trigger: ATGAAAGTACCATCGGATTCAAACTTCCCAGTTACC...GGAGGCCAAGACAGGCAGATCACTTGAGTCCAGTAGTTTAAGACCAGCCTGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000645184.1
ENST00000648181.1
CDS-3UTR TCA 90 bp CCCTTGTCATGTGGTGTCTTGTGGGGAGAACGGCTCCTAAAAGTCAATTCCTTGTGTTTGGTCACCATTTaGGGTGGGTACTGTCACCTC +
Preference number: 4 (lower is better)
Translates to: PLSCGVLWGERLLKVNSLCLVTI*GGYCHL
Trigger: GAGGTGACAGTACCCACCTCAAATGGTGACCAAACA...CAAGGAATTGACTTTTAGGAGCCGTTCTCCCCACAAGACACCACATGACAAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
CDS-3UTR TCA 90 bp GGTAGCTCTTCCTACAGGCCATCTGGCCATCAGGCAGTGGGCATGCACTACATGTTTTTGATCTCCTCTTaGCTCTTGTCTAAATCCTCC +
Preference number: 4 (lower is better)
Translates to: GSSSYRPSGHQAVGMHYMFLISS*LLSKSS
Trigger: GGAGGATTTAGACAAGAGTCAAGAGGAGATCAAAAA...CATGTAGTGCATGCCCACTGCCTGATGGCCAGATGGCCTGTAGGAAGAGCTACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
CDS-3UTR TCA 90 bp GGTAGCTCTTCCTACAGGCCATCTGGCCATCAGGCAGTGGGCATGCACTACATGTCTTTTTCAGCTCACTaGTGCTGGCATGATGTTTTT +
Preference number: 4 (lower is better)
Translates to: GSSSYRPSGHQAVGMHYMSFSAH*CWHDVF
Trigger: AAAAACATCATGCCAGCATCAGTGAGCTGAAAAAGA...CATGTAGTGCATGCCCACTGCCTGATGGCCAGATGGCCTGTAGGAAGAGCTACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR TCA 90 bp CAATGCAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAGTTCGGAAGGGTGAGTaGGTGGATAAGCGTTTATCC +
Preference number: 4 (lower is better)
Translates to: QCRKAGFGQSIATPLYPTVRKGE*VDKRLS
Trigger: GGATAAACGCTTATCCACTCACTCACCCTTCCGAAC...TGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTGCATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp GGTAGCTCTTCCTACAGGCCATCTGGCCATCAGGCAGTGGGCATGCACTACATGTTCAATACGTGTCTCTaGAATCCCACCTTTTACAGT +
Preference number: 4 (lower is better)
Translates to: GSSSYRPSGHQAVGMHYMFNTCL*NPTFYS
Trigger: ACTGTAAAAGGTGGGATTTCAGAGACACGTATTGAA...CATGTAGTGCATGCCCACTGCCTGATGGCCAGATGGCCTGTAGGAAGAGCTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR TCA 90 bp TCCAAAGGGGATAAGACTAGGGAGAGACGCGGAAGTCCCACTAAGCTGGCTTTGGCTTGTACAAGGACCTaGTCATGGTCAATATCAGCA +
Preference number: 4 (lower is better)
Translates to: SKGDKTRERRGSPTKLALACTRT*SWSISA
Trigger: TGCTGATATTGACCATGATCAGGTCCTTGTACAAGC...CAAAGCCAGCTTAGTGGGACTTCCGCGTCTCTCCCTAGTCTTATCCCCTTTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp GCATCTTTCCGAGGTCTGTGGATCAGGGCTGGTGCCCTCCCTGGCATTCTGATAATAATCTTGAAAGTCTaGAGTCTGACTATGGCAGGT +
Preference number: 4 (lower is better)
Translates to: ASFRGLWIRAGALPGILIIILKV*SLTMAG
Trigger: ACCTGCCATAGTCAGACTTCAGACTTTCAAGATTAT...TATCAGAATGCCAGGGAGGGCACCAGCCCTGATCCACAGACCTCGGAAAGATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp GGGCTCTTTCCCTCCCTCCTGTTGTTCATGTCTCACATGGGTACCAAAAGAAAAGGCTTCCAACACAGCTaGCAAGAGTCCTTGGAGGAT +
Preference number: 4 (lower is better)
Translates to: GLFPSLLLFMSHMGTKRKGFQHS*QESLED
Trigger: ATCCTCCAAGGACTCTTGTCAGCTGTGTTGGAAGCC...TTTTCTTTTGGTACCCATGTGAGACATGAACAACAGGAGGGAGGGAAAGAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp GAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGTTTGCCCTTGAGCCCCAGTaGCTGCTGCCCGATACCCAC +
Preference number: 4 (lower is better)
Translates to: ESLKSDYGRLASLSFCWFALEPQ*LLPDTH
Trigger: GTGGGTATCGGGCAGCAGTCACTGGGGCTCAAGGGC...AAACCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp CTAGGGAGAGACGCGGAAGTCCCACTAAGCTGGCTTTGGCTTCCAACACAGCTGCACTACATGTTCGTTTaGTGTAAGCTGCATTTCTTG +
Preference number: 4 (lower is better)
Translates to: LGRDAEVPLSWLWLPTQLHYMFV*CKLHFL
Trigger: CAAGAAATGCAGCTTACATCAAACGAACATGTAGTG...CAGCTGTGTTGGAAGCCAAAGCCAGCTTAGTGGGACTTCCGCGTCTCTCCCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR TCA 90 bp GCATCTTTCCGAGGTCTGTGGATCAGGGCTGGTGCCCTCCCTGGCATTCTGATACACTACATGTTCGTTTaGTGTAAGCTGCATTTCTTG +
Preference number: 4 (lower is better)
Translates to: ASFRGLWIRAGALPGILIHYMFV*CKLHFL
Trigger: CAAGAAATGCAGCTTACATCAAACGAACATGTAGTG...TATCAGAATGCCAGGGAGGGCACCAGCCCTGATCCACAGACCTCGGAAAGATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR TCA 90 bp AGAAGTCAACATGCAAACAGAGGACACATACTTGTCACAAGTGAACTTGAGGTCAGGCAGAGGTTGCAGTaGGCTGAGATCGCGCCACTG +
Preference number: 4 (lower is better)
Translates to: RSQHANRGHILVTSELEVRQRLQ*AEIAPL
Trigger: CAGTGGCGCGATCTCAGCTCACTGCAACCTCTGCCT...GACCTCAAGTTCACTTGTGACAAGTATGTGTCCTCTGTTTGCATGTTGACTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR TCA 90 bp AGAAGTCAACATGCAAACAGAGGACACATACTTGTCACAAGTGAACTTGAGGTCGGCCGGAGAATTGCTTaGACCCGGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: RSQHANRGHILVTSELEVGRRIA*TREAEV
Trigger: AACCTCTGCCTCCCGGGTTCAAGCAATTCTCCGGCC...GACCTCAAGTTCACTTGTGACAAGTATGTGTCCTCTGTTTGCATGTTGACTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR TCA 90 bp GTCCATGTTCCCCAGTCTGGTCTTGAATTCCTGAGCTTGAGCGATCGGCCGCCTAAACTTTCTAGTCCCTaGAGGCACAGTTTGAATACA +
Preference number: 4 (lower is better)
Translates to: VHVPQSGLEFLSLSDRPPKLSSP*RHSLNT
Trigger: TGTATTCAAACTGTGCCTTCAGGGACTAGAAAGTTT...AGGCGGCCGATCGCTCAAGCTCAGGAATTCAAGACCAGACTGGGGAACATGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642643.1
CDS-3UTR GCA 90 bp GAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGTTTTGCGCCCGCCACTGCTaGAGCCCGACGAACAATGGC +
Preference number: 4 (lower is better)
Translates to: ESLKSDYGRLASLSFCWFCARHC*SPTNNG
Trigger: GCCATTGTTCGTCGGGCTGCAGCAGTGGCGGGCGCA...AAACCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343067.9
ENST00000349460.9
CDS-3UTR GCA 90 bp GTCCAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATATGCGCCCGCCACTGCTaGAGCCCGACGAACAATGGC +
Preference number: 4 (lower is better)
Translates to: VQLRSFYSPCNFCTLLSICARHC*SPTNNG
Trigger: GCCATTGTTCGTCGGGCTGCAGCAGTGGCGGGCGCA...TATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644600.1
CDS-3UTR GCA 90 bp CAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAGTCTGCGCCCGCCACTGCTaGAGCCCGACGAACAATGGC +
Preference number: 4 (lower is better)
Translates to: QLRSFYSPCNFCTLLSIVCARHC*SPTNNG
Trigger: GCCATTGTTCGTCGGGCTGCAGCAGTGGCGGGCGCA...GACTATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644600.1
CDS-3UTR GCA 90 bp CAATGCAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAGTCGTGAAAGTCCTCTaGTTTCTGATGTCCGCTCCT +
Preference number: 4 (lower is better)
Translates to: QCRKAGFGQSIATPLYPTVVKVL*FLMSAP
Trigger: AGGAGCGGACATCAGAAAGCAGAGGACTTTCACGAC...TGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTGCATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR GCA 90 bp CAGAGACAGTTCTCAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTCCTATACAGGGCAGACGTCCTaGAACTATGTCCTGCCGAAG +
Preference number: 4 (lower is better)
Translates to: QRQFSEANHLLVAPNSSYTGQTS*NYVLPK
Trigger: CTTCGGCAGGACATAGTTGCAGGACGTCTGCCCTGT...ATAGGAGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTGAGAACTGTCTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648181.1
ENST00000648891.1
CDS-3UTR GCA 90 bp GGTAGCTCTTCCTACAGGCCATCTGGCCATCAGGCAGTGGGCATGCACTACATGTCCTTCCAAGTCCTTTaGTTTATGAAGATCAACTCC +
Preference number: 4 (lower is better)
Translates to: GSSSYRPSGHQAVGMHYMSFQVL*FMKINS
Trigger: GGAGTTGATCTTCATAAAGCAAAGGACTTGGAAGGA...CATGTAGTGCATGCCCACTGCCTGATGGCCAGATGGCCTGTAGGAAGAGCTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR GCA 90 bp GTTGGGAGAAGCAGCTTTAGACATTTCTCTTGCTCACTGCCCTTGAGCCCCAGTATGGTACTTTCATACTaGTCTTGCTCTCCAGGCCGA +
Preference number: 4 (lower is better)
Translates to: VGRSSFRHFSCSLPLSPSMVLSY*SCSPGR
Trigger: TCGGCCTGGAGAGCAAGAGCAGTATGAAAGTACCAT...ACTGGGGCTCAAGGGCAGTGAGCAAGAGAAATGTCTAAAGCTGCTTCTCCCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp CCAACACAGCTGACAAGAGTCCTTGGAGGATTTCCCGAAGAATTCCATGGACCCATGGTACTTTCATACTaGTCTTGCTCTCCAGGCCGA +
Preference number: 4 (lower is better)
Translates to: PTQLTRVLGGFPEEFHGPMVLSY*SCSPGR
Trigger: TCGGCCTGGAGAGCAAGAGCAGTATGAAAGTACCAT...GGGTCCATGGAATTCTTCGGGAAATCCTCCAAGGACTCTTGTCAGCTGTGTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp GAAGTCAACATGCAAACAGAGGACACATACTTGTCACAAGTGAACTTGAGGTCACCGAGGACTTCGGTCTaGCGAATCGACAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: EVNMQTEDTYLSQVNLRSPRTSV*RIDSCC
Trigger: GCAGCAGCTGTCGATTCGGCAGACCGAAGTCCTCGG...TGACCTCAAGTTCACTTGTGACAAGTATGTGTCCTCTGTTTGCATGTTGACTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR GCA 90 bp AAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAATACATACTCTGAGTAATGGCAGGTaGAGAAGTGGGCCGAGGACT +
Preference number: 4 (lower is better)
Translates to: KAGFGQSIATPLYPTIHTLSNGR*RSGPRT
Trigger: AGTCCTCGGCCCACTTCTGCACCTGCCATTACTCAG...AGTATGTATTGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR GCA 90 bp ACTATCAAGATCAGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAGGCTCTGGCTCAGCTTaGTCAGGTGGCTCGTCTTCC +
Preference number: 4 (lower is better)
Translates to: TIKIRGHHTAITQLKPRTGSGSA*SGGSSS
Trigger: GGAAGACGAGCCACCTGAGCAAGCTGAGCCAGAGCC...TGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCTGATCTTGATAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR GCA 90 bp GCTCAGCTTGCTCAGGTGGCTCGTCTTCCTTTTTCACTTCAGCCTTCACTGTTTTTTTTCCACCTTCCATaGTTCTGTGGGCTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: AQLAQVARLPFSLQPSLFFFHLP*FCGLWL
Trigger: GAGCCAGAGCCCACAGAAGCATGGAAGGTGGAAAAA...AAACAGTGAAGGCTGAAGTGAAAAAGGAAGACGAGCCACCTGAGCAAGCTGAGC
50% GC, longest homopolymer 8 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000643155.1
ENST00000648891.1
CDS-3UTR GCA 90 bp AAAAATGCACACACCCGAAATGAGTTCAAACCAGCCGAAACAAAACTCAGGCAGGTGGATCAGGGCTGGTaGCCTCCCTGGCATTCTGAT +
Preference number: 4 (lower is better)
Translates to: KNAHTRNEFKPAETKLRQVDQGW*PPWHSD
Trigger: ATCAGAATGCCAGGGAGGGCACCAGCCCTGATCCAC...CTGCCTGAGTTTTGTTTCGGCTGGTTTGAACTCATTTCGGGTGTGTGCATTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp GCCACATTCCTTGTCATTTGGGATGAAAGAAAGGCCCAGGATCAGACAGAAGTAAGCCCCAGTGACTGCTaGCCGATACCCACTGTCTAT +
Preference number: 4 (lower is better)
Translates to: ATFLVIWDERKAQDQTEVSPSDC*PIPTVY
Trigger: ATAGACAGTGGGTATCGGGCAGCAGTCACTGGGGCT...TACTTCTGTCTGATCCTGGGCCTTTCTTTCATCCCAAATGACAAGGAATGTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp GAAGCTGGAACTGGGATTCTAAGGAGCCTTGAGGCCAATGTGTTTGTGGGAAGCTTTAGACATTTCTCTTaGTCACTGCCCTTGAGCCCC +
Preference number: 4 (lower is better)
Translates to: EAGTGILRSLEANVFVGSFRHFS*SLPLSP
Trigger: GGGGCTCAAGGGCAGTGAGCAAGAGAAATGTCTAAA...GCTTCCCACAAACACATTGGCCTCAAGGCTCCTTAGAATCCCAGTTCCAGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp CCAACACAGCTGACAAGAGTCCTTGGAGGATTTCCCGAAGAATTCCATGGACCCTTTAGACATTTCTCTTaGTCACTGCCCTTGAGCCCC +
Preference number: 4 (lower is better)
Translates to: PTQLTRVLGGFPEEFHGPFRHFS*SLPLSP
Trigger: GGGGCTCAAGGGCAGTGAGCAAGAGAAATGTCTAAA...GGGTCCATGGAATTCTTCGGGAAATCCTCCAAGGACTCTTGTCAGCTGTGTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp GCTCTGGCTCCAGTTCCCGAGGTTTGTTGTCTCCTCACCCCCAGCTGCCAAGCAAGCAGACTTGATTATTaGCTGTGTAGTCTAAAGATT +
Preference number: 4 (lower is better)
Translates to: ALAPVPEVCCLLTPSCQASRLDY*LCSLKI
Trigger: AATCTTTAGACTACACAGGCAATAATCAAGTCTGCT...TGCTTGGCAGCTGGGGGTGAGGAGACAACAAACCTCGGGAACTGGAGCCAGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR GCA 90 bp ACTATCAAGATCAGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACACCGAGGACTTCGGTCTaGCGAATCGACAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: TIKIRGHHTAITQLKPRTPRTSV*RIDSCS
Trigger: GGAGCAGCTGTCGATTCGGCAGACCGAAGTCCTCGG...TGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCTGATCTTGATAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636666.1
ENST00000644342.1
CDS-3UTR GCA 90 bp AATCTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCAGGTTCCTGCCACTTTaGCCCGCCGGGGCCTCCACC +
Preference number: 4 (lower is better)
Translates to: NLESLKSDYGRLASLSFCRFLPL*PAGAST
Trigger: GGTGGAGGCCCCGGCGGGGCAAAGTGGCAGGAACCT...GCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642937.2
ENST00000647103.1
CDS-3UTR GCA 90 bp GGCAGGAAAAAGTTGTCTGTCCCTGTACAGCTCAGAAATACTCATAAAAAGGCCCTGAGGCCGGAGAATTaGTTGAACCCGGGAGGCAGA +
Preference number: 4 (lower is better)
Translates to: GRKKLSVPVQLRNTHKKALRPEN*LNPGGR
Trigger: TCTGCCTCCCGGGTTCAAGCAATTCTCCGGCCTCAG...GGCCTTTTTATGAGTATTTCTGAGCTGTACAGGGACAGACAACTTTTTCCTGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR GCA 90 bp CAATTGGTCATGTGGACAAAGTACTCACTCCTTCTCCTGTGGGGATTTGCCCATCTTTCATACTGCTCTTaGTGCCAGGCACGGTGGCTT +
Preference number: 4 (lower is better)
Translates to: QLVMWTKYSLLLLWGFAHLSYCS*CQARWL
Trigger: AAGCCACCGTGCCTGGCAGCAAGAGCAGTATGAAAG...ATGGGCAAATCCCCACAGGAGAAGGAGTGAGTACTTTGTCCACATGACCAATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648891.1
CDS-3UTR GCA 90 bp GCTCAGCTTGCTCAGGTGGCTCGTCTTCCTTTTTCACTTCAGCCTTCACTGTTTATGGTACTTTCATACTaGTCTTGCTGCCAGGCACGG +
Preference number: 4 (lower is better)
Translates to: AQLAQVARLPFSLQPSLFMVLSY*SCCQAR
Trigger: CCGTGCCTGGCAGCAAGAGCAGTATGAAAGTACCAT...AAACAGTGAAGGCTGAAGTGAAAAAGGAAGACGAGCCACCTGAGCAAGCTGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648891.1
CDS-3UTR CCA 90 bp CAGAAGTGGGCCGAGGACTTCGGTCTGCCGAATCGACAGCTGCTGCTCCATCGACTTTTACTTCTATTTTaGAGCACTCTTCAAGTCCTT +
Preference number: 4 (lower is better)
Translates to: QKWAEDFGLPNRQLLLHRLLLLF*STLQVL
Trigger: AAGGACTTGAAGAGTGCTCCAAAATAGAAGTAAAAG...TCGATGGAGCAGCAGCTGTCGATTCGGCAGACCGAAGTCCTCGGCCCACTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
CDS-3UTR CCA 90 bp CTGAGTAATGGCAGGTGCAGAAGTGGGCCGAGGACTTCGGTCTGCCGAATCGACCTGTGCTGGGTCAGGTaGATAAAACTTTACATTAAA +
Preference number: 4 (lower is better)
Translates to: LSNGRCRSGPRTSVCRIDLCWVR*IKLYIK
Trigger: TTTAATGTAAAGTTTTATCCACCTGACCCAGCACAG...GTCGATTCGGCAGACCGAAGTCCTCGGCCCACTTCTGCACCTGCCATTACTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
CDS-3UTR CCA 90 bp GGTAGCTCTTCCTACAGGCCATCTGGCCATCAGGCAGTGGGCATGCACTACATGCCAGTTCAGACTGGATaGTGTAAGAACCTAATAATG +
Preference number: 4 (lower is better)
Translates to: GSSSYRPSGHQAVGMHYMPVQTG*CKNLIM
Trigger: CATTATTAGGTTCTTACACCATCCAGTCTGAACTGG...CATGTAGTGCATGCCCACTGCCTGATGGCCAGATGGCCTGTAGGAAGAGCTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR CCA 90 bp GCCACATTCCTTGTCATTTGGGATGAAAGAAAGGCCCAGGATCAGACAGAAGTACACGCCATGGAGTTCTaGGTCGTAGTCTCCCAGTTC +
Preference number: 4 (lower is better)
Translates to: ATFLVIWDERKAQDQTEVHAMEF*VVVSQF
Trigger: GAACTGGGAGACTACGACCCAGAACTCCATGGCGTG...TACTTCTGTCTGATCCTGGGCCTTTCTTTCATCCCAAATGACAAGGAATGTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp TTCACAATTGGTCATGTGGACAAAGTACTCACTCCTTCTCCTGTGGGGATTTGCCACGCCATGGAGTTCTaGGTCGTAGTCTCCCAGTTC +
Preference number: 4 (lower is better)
Translates to: FTIGHVDKVLTPSPVGICHAMEF*VVVSQF
Trigger: GAACTGGGAGACTACGACCCAGAACTCCATGGCGTG...GCAAATCCCCACAGGAGAAGGAGTGAGTACTTTGTCCACATGACCAATTGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642643.1
ENST00000648891.1
CDS-3UTR CCA 90 bp GAAGCTGGAACTGGGATTCTAAGGAGCCTTGAGGCCAATGTGTTTGTGGGAAGCCCTGAGCTGGAGTCATaGACCTGTATGACTTATGCA +
Preference number: 4 (lower is better)
Translates to: EAGTGILRSLEANVFVGSPELES*TCMTYA
Trigger: TGCATAAGTCATACAGGTCCATGACTCCAGCTCAGG...GCTTCCCACAAACACATTGGCCTCAAGGCTCCTTAGAATCCCAGTTCCAGCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp CCCTTGTCATGTGGTGTCTTGTGGGGAGAACGGCTCCTAAAAGTCAATTCCTTGCTCAGCTTGCTCAGGTaGCTCGTCTTCCTTTTTCAC +
Preference number: 4 (lower is better)
Translates to: PLSCGVLWGERLLKVNSLLSLLR*LVFLFH
Trigger: GTGAAAAAGGAAGACGAGCCACCTGAGCAAGCTGAG...CAAGGAATTGACTTTTAGGAGCCGTTCTCCCCACAAGACACCACATGACAAGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp CAGAGACAGTTCTCAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTCCTATCCTTCCATGCTTCTGTaGGCTCTGGCTCAGCTTGCT +
Preference number: 4 (lower is better)
Translates to: QRQFSEANHLLVAPNSSYPSMLL*ALAQLA
Trigger: AGCAAGCTGAGCCAGAGCCCACAGAAGCATGGAAGG...ATAGGAGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTGAGAACTGTCTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648181.1
ENST00000648891.1
CDS-3UTR CCA 90 bp CAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTCCTATAATTGCACTGGGTCCTTCCATGCTTCTGTaGGCTCTGGCTCAGCTTGCT +
Preference number: 4 (lower is better)
Translates to: QRLIIYWWLQIAPIIALGPSMLL*ALAQLA
Trigger: AGCAAGCTGAGCCAGAGCCCACAGAAGCATGGAAGG...ACCCAGTGCAATTATAGGAGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648181.1
ENST00000648891.1
CDS-3UTR CCA 90 bp GAAGCATGTAGCTGCAGAGACAGTTCTCAGAGGCTAATCATCTACTGGTGGCTCGGTCACCATTTGAGGTaGGTACTGTCACCTCGATGT +
Preference number: 4 (lower is better)
Translates to: EACSCRDSSQRLIIYWWLGHHLR*VLSPRC
Trigger: ACATCGAGGTGACAGTACCCACCTCAAATGGTGACC...GAGCCACCAGTAGATGATTAGCCTCTGAGAACTGTCTCTGCAGCTACATGCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648181.1
ENST00000648891.1
CDS-3UTR CCA 90 bp GAAGCTGGAACTGGGATTCTAAGGAGCCTTGAGGCCAATGTGTTTGTGGGAAGCACTAGGCCGTGGTTCTaGTACAGACTCCATGAAGTT +
Preference number: 4 (lower is better)
Translates to: EAGTGILRSLEANVFVGSTRPWF*YRLHEV
Trigger: AACTTCATGGAGTCTGTACCAGAACCACGGCCTAGT...GCTTCCCACAAACACATTGGCCTCAAGGCTCCTTAGAATCCCAGTTCCAGCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR CCA 90 bp GAAGCATGTAGCTGCAGAGACAGTTCTCAGAGGCTAATCATCTACTGGTGGCTCCCATTCACTAGGCCGTaGTTCTGGTACAGACTCCAT +
Preference number: 4 (lower is better)
Translates to: EACSCRDSSQRLIIYWWLPFTRP*FWYRLH
Trigger: ATGGAGTCTGTACCAGAACCACGGCCTAGTGAATGG...GAGCCACCAGTAGATGATTAGCCTCTGAGAACTGTCTCTGCAGCTACATGCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648181.1
ENST00000648891.1
CDS-3UTR CCA 90 bp CTCTGGCTCAGCTTGCTCAGGTGGCTCGTCTTCCTTTTTCACTTCAGCCTTCACGGAAGGGTGAGTGAGTaGATAAGCGTTTATCCCATT +
Preference number: 4 (lower is better)
Translates to: LWLSLLRWLVFLFHFSLHGRVSE*ISVYPI
Trigger: AATGGGATAAACGCTTATCCACTCACTCACCCTTCC...GTGAAGGCTGAAGTGAAAAAGGAAGACGAGCCACCTGAGCAAGCTGAGCCAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
CDS-3UTR CCA 90 bp TCCAAAGGGGATAAGACTAGGGAGAGACGCGGAAGTCCCACTAAGCTGGCTTTGAGGGACGTCTTTGGTTaGGATTTCACTTTTCACAGC +
Preference number: 4 (lower is better)
Translates to: SKGDKTRERRGSPTKLALRDVFG*DFTFHS
Trigger: GCTGTGAAAAGTGAAATCCCAACCAAAGACGTCCCT...CAAAGCCAGCTTAGTGGGACTTCCGCGTCTCTCCCTAGTCTTATCCCCTTTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp AAAAATGCACACACCCGAAATGAGTTCAAACCAGCCGAAACAAAACTCAGGCAGGCAATCTCGGTCTCCTaGTGGACGACCACCTTGGTC +
Preference number: 4 (lower is better)
Translates to: KNAHTRNEFKPAETKLRQAISVS*WTTTLV
Trigger: GACCAAGGTGGTCGTCCACCAGGAGACCGAGATTGC...CTGCCTGAGTTTTGTTTCGGCTGGTTTGAACTCATTTCGGGTGTGTGCATTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp GTTGGGAGAAGCAGCTTTAGACATTTCTCTTGCTCACTGCCCTTGAGCCCCAGTTCCCGAAGAATTCCATaGACCCTGTCAGTGTCTGTT +
Preference number: 4 (lower is better)
Translates to: VGRSSFRHFSCSLPLSPSSRRIP*TLSVSV
Trigger: AACAGACACTGACAGGGTCCATGGAATTCTTCGGGA...ACTGGGGCTCAAGGGCAGTGAGCAAGAGAAATGTCTAAAGCTGCTTCTCCCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp AAAAATGCACACACCCGAAATGAGTTCAAACCAGCCGAAACAAAACTCAGGCAGTCTGTGGATCAGGGCTaGTGCCCTCCCTGGCATTCT +
Preference number: 4 (lower is better)
Translates to: KNAHTRNEFKPAETKLRQSVDQG*CPPWHS
Trigger: AGAATGCCAGGGAGGGCACCAGCCCTGATCCACAGA...CTGCCTGAGTTTTGTTTCGGCTGGTTTGAACTCATTTCGGGTGTGTGCATTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp GGGCTCTTTCCCTCCCTCCTGTTGTTCATGTCTCACATGGGTACCAAAAGAAAATTTGGTCTCCTGAGATaGGAGCTAGGGGGAGCACTT +
Preference number: 4 (lower is better)
Translates to: GLFPSLLLFMSHMGTKRKFGLLR*ELGGAL
Trigger: AAGTGCTCCCCCTAGCTCCCATCTCAGGAGACCAAA...TTTTCTTTTGGTACCCATGTGAGACATGAACAACAGGAGGGAGGGAAAGAGCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp CAGCTGACAAGAGTCCTTGGAGGATTTCCCGAAGAATTCCATGGACCCTGTCAGTCATGTGGTGTCTTGTaGGGAGAACGGCTCCTAAAA +
Preference number: 4 (lower is better)
Translates to: QLTRVLGGFPEEFHGPCQSCGVL*GERLLK
Trigger: TTTTAGGAGCCGTTCTCCCCACAAGACACCACATGA...CTGACAGGGTCCATGGAATTCTTCGGGAAATCCTCCAAGGACTCTTGTCAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp GAAGCTGGAACTGGGATTCTAAGGAGCCTTGAGGCCAATGTGTTTGTGGGAAGCTCATGTGGTGTCTTGTaGGGAGAACGGCTCCTAAAA +
Preference number: 4 (lower is better)
Translates to: EAGTGILRSLEANVFVGSSCGVL*GERLLK
Trigger: TTTTAGGAGCCGTTCTCCCCACAAGACACCACATGA...GCTTCCCACAAACACATTGGCCTCAAGGCTCCTTAGAATCCCAGTTCCAGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp CTAGGGAGAGACGCGGAAGTCCCACTAAGCTGGCTTTGGCTTCCAACACAGCTGTCTATTTTAGGAAGCTaGAACTGGGATTCTAAGGAG +
Preference number: 4 (lower is better)
Translates to: LGRDAEVPLSWLWLPTQLSILGS*NWDSKE
Trigger: CTCCTTAGAATCCCAGTTCCAGCTTCCTAAAATAGA...CAGCTGTGTTGGAAGCCAAAGCCAGCTTAGTGGGACTTCCGCGTCTCTCCCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp GGGCTCTTTCCCTCCCTCCTGTTGTTCATGTCTCACATGGGTACCAAAAGAAAAAGGCAGTGGAGACTTTaGACGGTGTTGGGAGAAGCA +
Preference number: 4 (lower is better)
Translates to: GLFPSLLLFMSHMGTKRKRQWRL*TVLGEA
Trigger: TGCTTCTCCCAACACCGTCCAAAGTCTCCACTGCCT...TTTTCTTTTGGTACCCATGTGAGACATGAACAACAGGAGGGAGGGAAAGAGCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp CTAGGGAGAGACGCGGAAGTCCCACTAAGCTGGCTTTGGCTTCCAACACAGCTGCTCACCATTTCTACCTaGACAGAGTCTGTTTTTCTT +
Preference number: 4 (lower is better)
Translates to: LGRDAEVPLSWLWLPTQLLTIST*TESVFL
Trigger: AAGAAAAACAGACTCTGTCCAGGTAGAAATGGTGAG...CAGCTGTGTTGGAAGCCAAAGCCAGCTTAGTGGGACTTCCGCGTCTCTCCCTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR CCA 90 bp CAATGCAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACACAGAAAAGCTGGCTTTaGGCAGTCCATTGCTACTCC +
Preference number: 4 (lower is better)
Translates to: QCRKAGFGQSIATPLYPTQKSWL*AVHCYS
Trigger: GGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTG...TGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTGCATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp GTCCAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATACCGGCTGCTGCTGGCTaGCTGACTAAACGCACCAGC +
Preference number: 4 (lower is better)
Translates to: VQLRSFYSPCNFCTLLSIPAAAG*LTKRTS
Trigger: GCTGGTGCGTTTAGTCAGTCAGCCAGCAGCAGCCGG...TATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644600.1
CDS-3UTR TCA 90 bp CAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAGTCCCGGCTGCTGCTGGCTaGCTGACTAAACGCACCAGC +
Preference number: 4 (lower is better)
Translates to: QLRSFYSPCNFCTLLSIVPAAAG*LTKRTS
Trigger: GCTGGTGCGTTTAGTCAGTCAGCCAGCAGCAGCCGG...GACTATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644600.1
CDS-3UTR TCA 90 bp CAGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAGAAGTTCAATGTCTTCTCTGTTGTCATaGTGTTGCGGTGGCTCCGGG +
Preference number: 4 (lower is better)
Translates to: QRASYSNNTVEAKDRSSMSSLLS*CCGGSG
Trigger: CCCGGAGCCACCGCAACATCATGACAACAGAGAAGA...CATTGAACTTCTGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644600.1
ENST00000644780.1
ENST00000650265.1
CDS-3UTR TCA 90 bp AGCTGCAGAGACAGTTCTCAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTCTTCTGTTGGTGCTGTaGATTTTCGGCCTCAGTCAC +
Preference number: 4 (lower is better)
Translates to: SCRDSSQRLIIYWWLQIALLLVL*IFGLSH
Trigger: GTGACTGAGGCCGAAAATTCACAGCACCAACAGAAG...AGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTGAGAACTGTCTCTGCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000645184.1
ENST00000648181.1
ENST00000648891.1
CDS-3UTR TCA 90 bp GGGCTCTTTCCCTCCCTCCTGTTGTTCATGTCTCACATGGGTACCAAAAGAAAAAGGTTCTTGTTGGCCTaGGTTTATGGCTTCCTCACC +
Preference number: 4 (lower is better)
Translates to: GLFPSLLLFMSHMGTKRKRFLLA*VYGFLT
Trigger: GGTGAGGAAGCCATAAACTCAGGCCAACAAGAACCT...TTTTCTTTTGGTACCCATGTGAGACATGAACAACAGGAGGGAGGGAAAGAGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp AAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAATACATACTCAAGATTCCTCCTGCTaGGGTTCTTGTTGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: KAGFGQSIATPLYPTIHTQDSSC*GSCWPE
Trigger: CTCAGGCCAACAAGAACCTCAGCAGGAGGAATCTTG...AGTATGTATTGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp CAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTCCTATAATTGCACTGGGTCAAGATTCCTCCTGCTaGGGTTCTTGTTGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: QRLIIYWWLQIAPIIALGQDSSC*GSCWPE
Trigger: CTCAGGCCAACAAGAACCTCAGCAGGAGGAATCTTG...ACCCAGTGCAATTATAGGAGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000645184.1
ENST00000648181.1
ENST00000648891.1
CDS-3UTR TCA 90 bp CAGAGACAGTTCTCAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTCCTATCAAGATTCCTCCTGCTaGGGTTCTTGTTGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: QRQFSEANHLLVAPNSSYQDSSC*GSCWPE
Trigger: CTCAGGCCAACAAGAACCTCAGCAGGAGGAATCTTG...ATAGGAGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTGAGAACTGTCTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000645184.1
ENST00000648181.1
ENST00000648891.1
CDS-3UTR TCA 90 bp GGCTCAGCTTGCTCAGGTGGCTCGTCTTCCTTTTTCACTTCAGCCTTCACTGTTGAGATTTGGGCCTTTTaGGAAACGAGGAGAATAGTC +
Preference number: 4 (lower is better)
Translates to: GSACSGGSSSFFTSAFTVEIWAF*ETRRIV
Trigger: GACTATTCTCCTCGTTTCTCAAAAGGCCCAAATCTC...AACAGTGAAGGCTGAAGTGAAAAAGGAAGACGAGCCACCTGAGCAAGCTGAGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
CDS-3UTR TCA 90 bp CAGCTGACAAGAGTCCTTGGAGGATTTCCCGAAGAATTCCATGGACCCTGTCAGGAGATTTGGGCCTTTTaGGAAACGAGGAGAATAGTC +
Preference number: 4 (lower is better)
Translates to: QLTRVLGGFPEEFHGPCQEIWAF*ETRRIV
Trigger: GACTATTCTCCTCGTTTCTCAAAAGGCCCAAATCTC...CTGACAGGGTCCATGGAATTCTTCGGGAAATCCTCCAAGGACTCTTGTCAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp GGGCTCTTTCCCTCCCTCCTGTTGTTCATGTCTCACATGGGTACCAAAAGAAAATCTTCCTCGGACACCTaGGATTTGGGCCTTTTGAGA +
Preference number: 4 (lower is better)
Translates to: GLFPSLLLFMSHMGTKRKSSSDT*DLGLLR
Trigger: TCTCAAAAGGCCCAAATCTCAGGTGTCCGAGGAAGA...TTTTCTTTTGGTACCCATGTGAGACATGAACAACAGGAGGGAGGGAAAGAGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp CAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAATACATCTTCCTCGGACACCTaGGATTTGGGCCTTTTGAGA +
Preference number: 4 (lower is better)
Translates to: QKSWLWAVHCYSFVPHNTSSSDT*DLGLLR
Trigger: TCTCAAAAGGCCCAAATCTCAGGTGTCCGAGGAAGA...TGTATTGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp CAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAATACAAAGATGGGTCTGTTTTaGGTTCCGGTTCAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: QKSWLWAVHCYSFVPHNTKMGLF*VPVQEL
Trigger: CAGCTCCTGAACCGGAACTCAAAACAGACCCATCTT...TGTATTGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp GCTCAGCTTGCTCAGGTGGCTCGTCTTCCTTTTTCACTTCAGCCTTCACTGTTTAATCTGGATCTTCTCTaGGTTCTTCCTGAGCAGGCT +
Preference number: 4 (lower is better)
Translates to: AQLAQVARLPFSLQPSLFNLDLL*VLPEQA
Trigger: AGCCTGCTCAGGAAGAACTCAGAGAAGATCCAGATT...AAACAGTGAAGGCTGAAGTGAAAAAGGAAGACGAGCCACCTGAGCAAGCTGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642643.1
ENST00000648891.1
CDS-3UTR TCA 90 bp GCCCAGGCTGGTCTTAAACTACTGGACTCAAGTGATCTGCCTGTCTTGGCCTCCCTTCTTCCAAAAGATTaGGATGCTCACATACTCGTT +
Preference number: 4 (lower is better)
Translates to: AQAGLKLLDSSDLPVLASLLPKD*DAHILV
Trigger: AACGAGTATGTGAGCATCTCAATCTTTTGGAAGAAG...GGAGGCCAAGACAGGCAGATCACTTGAGTCCAGTAGTTTAAGACCAGCCTGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645184.1
CDS-3UTR TCA 90 bp CAGCTGACAAGAGTCCTTGGAGGATTTCCCGAAGAATTCCATGGACCCTGTCAGAGTCATGGACCTGTATaGCTTATGCAGTTCCATGAC +
Preference number: 4 (lower is better)
Translates to: QLTRVLGGFPEEFHGPCQSHGPV*LMQFHD
Trigger: GTCATGGAACTGCATAAGTCATACAGGTCCATGACT...CTGACAGGGTCCATGGAATTCTTCGGGAAATCCTCCAAGGACTCTTGTCAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp ACTTTCATACTGCTCTTGCTCTCCAGGCCGAATCTTGATGAAAAAGCTACTACGAACTCCAAGTCAGCCTaGGCTGGAGTCATGGACCTG +
Preference number: 4 (lower is better)
Translates to: TFILLLLSRPNLDEKATTNSKSA*AGVMDL
Trigger: CAGGTCCATGACTCCAGCTCAGGCTGACTTGGAGTT...CGTAGTAGCTTTTTCATCAAGATTCGGCCTGGAGAGCAAGAGCAGTATGAAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642643.1
ENST00000643155.1
CDS-3UTR TCA 90 bp AAAAATGCACACACCCGAAATGAGTTCAAACCAGCCGAAACAAAACTCAGGCAGAACTCCAAGTCAGCCTaGGCTGGAGTCATGGACCTG +
Preference number: 4 (lower is better)
Translates to: KNAHTRNEFKPAETKLRQNSKSA*AGVMDL
Trigger: CAGGTCCATGACTCCAGCTCAGGCTGACTTGGAGTT...CTGCCTGAGTTTTGTTTCGGCTGGTTTGAACTCATTTCGGGTGTGTGCATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp AGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAGAAGTTCAATGGAACTCCAAGTCAGCCTaGGCTGGAGTCATGGACCTG +
Preference number: 4 (lower is better)
Translates to: RGHHTAITQLKPRTEVQWNSKSA*AGVMDL
Trigger: CAGGTCCATGACTCCAGCTCAGGCTGACTTGGAGTT...CCATTGAACTTCTGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp GTCCATGTTCCCCAGTCTGGTCTTGAATTCCTGAGCTTGAGCGATCGGCCGCCTAATCTGAAAAACGTGTaGTGTTCTACACAGACTTTC +
Preference number: 4 (lower is better)
Translates to: VHVPQSGLEFLSLSDRPPNLKNV*CSTQTF
Trigger: GAAAGTCTGTGTAGAACATCACACGTTTTTCAGATT...AGGCGGCCGATCGCTCAAGCTCAGGAATTCAAGACCAGACTGGGGAACATGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642643.1
CDS-3UTR TCA 90 bp GCATCTTTCCGAGGTCTGTGGATCAGGGCTGGTGCCCTCCCTGGCATTCTGATAAATCTGAAAAACGTGTaGTGTTCTACACAGACTTTC +
Preference number: 4 (lower is better)
Translates to: ASFRGLWIRAGALPGILINLKNV*CSTQTF
Trigger: GAAAGTCTGTGTAGAACATCACACGTTTTTCAGATT...TATCAGAATGCCAGGGAGGGCACCAGCCCTGATCCACAGACCTCGGAAAGATGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp GGGCTCTTTCCCTCCCTCCTGTTGTTCATGTCTCACATGGGTACCAAAAGAAAATGTTTGGTCACCATTTaGGGTGGGTACTGTCACCTC +
Preference number: 4 (lower is better)
Translates to: GLFPSLLLFMSHMGTKRKCLVTI*GGYCHL
Trigger: GAGGTGACAGTACCCACCTCAAATGGTGACCAAACA...TTTTCTTTTGGTACCCATGTGAGACATGAACAACAGGAGGGAGGGAAAGAGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
CDS-3UTR TCA 90 bp GAAGCTGGAACTGGGATTCTAAGGAGCCTTGAGGCCAATGTGTTTGTGGGAAGCCTGGTACAGACTCCATaGAGTTCTTTTTCAGCTCAC +
Preference number: 4 (lower is better)
Translates to: EAGTGILRSLEANVFVGSLVQTP*SSFSAH
Trigger: GTGAGCTGAAAAAGAACTTCATGGAGTCTGTACCAG...GCTTCCCACAAACACATTGGCCTCAAGGCTCCTTAGAATCCCAGTTCCAGCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR TCA 90 bp GGGCTCTTTCCCTCCCTCCTGTTGTTCATGTCTCACATGGGTACCAAAAGAAAAGTTCGGAAGGGTGAGTaGGTGGATAAGCGTTTATCC +
Preference number: 4 (lower is better)
Translates to: GLFPSLLLFMSHMGTKRKVRKGE*VDKRLS
Trigger: GGATAAACGCTTATCCACTCACTCACCCTTCCGAAC...TTTTCTTTTGGTACCCATGTGAGACATGAACAACAGGAGGGAGGGAAAGAGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR TCA 90 bp AGCTGCAGAGACAGTTCTCAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTGTTCGGAAGGGTGAGTaGGTGGATAAGCGTTTATCC +
Preference number: 4 (lower is better)
Translates to: SCRDSSQRLIIYWWLQIAVRKGE*VDKRLS
Trigger: GGATAAACGCTTATCCACTCACTCACCCTTCCGAAC...AGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTGAGAACTGTCTCTGCAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648181.1
ENST00000648891.1
CDS-3UTR TCA 90 bp GCCACATTCCTTGTCATTTGGGATGAAAGAAAGGCCCAGGATCAGACAGAAGTAGGGCAGCCTCATAAGTaGTGGTCTTGGTCTCAGTGT +
Preference number: 4 (lower is better)
Translates to: ATFLVIWDERKAQDQTEVGQPHK*WSWSQC
Trigger: ACACTGAGACCAAGACCATCACTTATGAGGCTGCCC...TACTTCTGTCTGATCCTGGGCCTTTCTTTCATCCCAAATGACAAGGAATGTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp GTTGGGAGAAGCAGCTTTAGACATTTCTCTTGCTCACTGCCCTTGAGCCCCAGTACAGTCTTGGTAATTTaGGTTGTGGTGGTGCTGCTT +
Preference number: 4 (lower is better)
Translates to: VGRSSFRHFSCSLPLSPSTVLVI*VVVVLL
Trigger: AAGCAGCACCACCACAACTCAAATTACCAAGACTGT...ACTGGGGCTCAAGGGCAGTGAGCAAGAGAAATGTCTAAAGCTGCTTCTCCCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp CTAGGGAGAGACGCGGAAGTCCCACTAAGCTGGCTTTGGCTTCCAACACAGCTGTATCAGCATCTCCTGTaGTCACAATTCTCTTTTCAA +
Preference number: 4 (lower is better)
Translates to: LGRDAEVPLSWLWLPTQLYQHLL*SQFSFQ
Trigger: TTGAAAAGAGAATTGTGATCACAGGAGATGCTGATA...CAGCTGTGTTGGAAGCCAAAGCCAGCTTAGTGGGACTTCCGCGTCTCTCCCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp GCCACATTCCTTGTCATTTGGGATGAAAGAAAGGCCCAGGATCAGACAGAAGTAGGCTTCCAACACAGCTaGCAAGAGTCCTTGGAGGAT +
Preference number: 4 (lower is better)
Translates to: ATFLVIWDERKAQDQTEVGFQHS*QESLED
Trigger: ATCCTCCAAGGACTCTTGTCAGCTGTGTTGGAAGCC...TACTTCTGTCTGATCCTGGGCCTTTCTTTCATCCCAAATGACAAGGAATGTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp GGTAGCTCTTCCTACAGGCCATCTGGCCATCAGGCAGTGGGCATGCACTACATGACAGTATCAGATATCTaGAGCAACTTCCATGTCTTT +
Preference number: 4 (lower is better)
Translates to: GSSSYRPSGHQAVGMHYMTVSDI*SNFHVF
Trigger: AAAGACATGGAAGTTGCTTCAGATATCTGATACTGT...CATGTAGTGCATGCCCACTGCCTGATGGCCAGATGGCCTGTAGGAAGAGCTACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR TCA 90 bp CCAACACAGCTGACAAGAGTCCTTGGAGGATTTCCCGAAGAATTCCATGGACCCCAGGCAGGTTCCTGTTaGGAGAAGAAAGGTCAAAAA +
Preference number: 4 (lower is better)
Translates to: PTQLTRVLGGFPEEFHGPQAGSC*EKKGQK
Trigger: TTTTTGACCTTTCTTCTCTCAACAGGAACCTGCCTG...GGGTCCATGGAATTCTTCGGGAAATCCTCCAAGGACTCTTGTCAGCTGTGTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp CTCTTTCCCTCCCTCCTGTTGTTCATGTCTCACATGGGTACCAAAAGAAAAATGCGAAGCCGAGAGAAGTaGGTTGGTGACAGAGCTGAG +
Preference number: 4 (lower is better)
Translates to: LFPSLLLFMSHMGTKRKMRSREK*VGDRAE
Trigger: CTCAGCTCTGTCACCAACTCACTTCTCTCGGCTTCG...CATTTTTCTTTTGGTACCCATGTGAGACATGAACAACAGGAGGGAGGGAAAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR TCA 90 bp AAAAATGCACACACCCGAAATGAGTTCAAACCAGCCGAAACAAAACTCAGGCAGCGAAGCCGAGAGAAGTaGGTTGGTGACAGAGCTGAG +
Preference number: 4 (lower is better)
Translates to: KNAHTRNEFKPAETKLRQRSREK*VGDRAE
Trigger: CTCAGCTCTGTCACCAACTCACTTCTCTCGGCTTCG...CTGCCTGAGTTTTGTTTCGGCTGGTTTGAACTCATTTCGGGTGTGTGCATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR TCA 90 bp GTTGGGAGAAGCAGCTTTAGACATTTCTCTTGCTCACTGCCCTTGAGCCCCAGTTGGCTTCTAAGAGCCTaGAAGGCATTAGAGCTCTTT +
Preference number: 4 (lower is better)
Translates to: VGRSSFRHFSCSLPLSPSWLLRA*KALELF
Trigger: AAAGAGCTCTAATGCCTTTCAGGCTCTTAGAAGCCA...ACTGGGGCTCAAGGGCAGTGAGCAAGAGAAATGTCTAAAGCTGCTTCTCCCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR TCA 90 bp GGGCTCTTTCCCTCCCTCCTGTTGTTCATGTCTCACATGGGTACCAAAAGAAAAGGCAGAAATTTCCCGTaGGCATCAAAAGGCGTCAGT +
Preference number: 4 (lower is better)
Translates to: GLFPSLLLFMSHMGTKRKGRNFP*ASKGVS
Trigger: ACTGACGCCTTTTGATGCTCACGGGAAATTTCTGCC...TTTTCTTTTGGTACCCATGTGAGACATGAACAACAGGAGGGAGGGAAAGAGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR TCA 90 bp CAATGCAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAAACAGGTTAGGCATGTaGGTTGTCCTGAAGAGAGAG +
Preference number: 4 (lower is better)
Translates to: QCRKAGFGQSIATPLYPTNRLGM*VVLKRE
Trigger: CTCTCTCTTCAGGACAACTCACATGCCTAACCTGTT...TGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTGCATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR GCA 90 bp GAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGTTTTCCTGCGCCCGCCACTaGTGCAGCCCGACGAACAAT +
Preference number: 4 (lower is better)
Translates to: ESLKSDYGRLASLSFCWFSCARH*CSPTNN
Trigger: ATTGTTCGTCGGGCTGCAGCAGTGGCGGGCGCAGGA...AAACCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343067.9
ENST00000349460.9
CDS-3UTR GCA 90 bp GTTGGGAGAAGCAGCTTTAGACATTTCTCTTGCTCACTGCCCTTGAGCCCCAGTTCTTCCTTCTGTTGGTaGTGTGAATTTTCGGCCTCA +
Preference number: 4 (lower is better)
Translates to: VGRSSFRHFSCSLPLSPSSSFCW*CEFSAS
Trigger: TGAGGCCGAAAATTCACAGCACCAACAGAAGGAAGA...ACTGGGGCTCAAGGGCAGTGAGCAAGAGAAATGTCTAAAGCTGCTTCTCCCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp CTCCTTTGCCTCCTTGATGGCTTGTACAAGGACCTGATCATGGTCAATATCAGCGTCGTGAAAGTCCTCTaGTTTCTGATGTCCGCTCCT +
Preference number: 4 (lower is better)
Translates to: LLCLLDGLYKDLIMVNISVVKVL*FLMSAP
Trigger: AGGAGCGGACATCAGAAAGCAGAGGACTTTCACGAC...GCTGATATTGACCATGATCAGGTCCTTGTACAAGCCATCAAGGAGGCAAAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643155.1
CDS-3UTR GCA 90 bp CAATGCAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACACTGACTCTACTTCTTTaGCTTCTTCCTCGGACACCT +
Preference number: 4 (lower is better)
Translates to: QCRKAGFGQSIATPLYPTLTLLL*LLPRTP
Trigger: AGGTGTCCGAGGAAGAAGGCAAAGAAGTAGAGTCAG...TGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTGCATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR GCA 90 bp ATGTTGCCCAGGCTGGTCTTAAACTACTGGACTCAAGTGATCTGCCTGTCTTGGCTGACTCTACTTCTTTaGCTTCTTCCTCGGACACCT +
Preference number: 4 (lower is better)
Translates to: MLPRLVLNYWTQVICLSWLTLLL*LLPRTP
Trigger: AGGTGTCCGAGGAAGAAGGCAAAGAAGTAGAGTCAG...CCAAGACAGGCAGATCACTTGAGTCCAGTAGTTTAAGACCAGCCTGGGCAACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000645184.1
ENST00000648181.1
CDS-3UTR GCA 90 bp GCCCAGGCTGGTCTTAAACTACTGGACTCAAGTGATCTGCCTGTCTTGGCCTCCGCTGTGTTTCTGCACTaGTTAATGAATGAAGATCCA +
Preference number: 4 (lower is better)
Translates to: AQAGLKLLDSSDLPVLASAVFLH*LMNEDP
Trigger: TGGATCTTCATTCATTAAGCAGTGCAGAAACACAGC...GGAGGCCAAGACAGGCAGATCACTTGAGTCCAGTAGTTTAAGACCAGCCTGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645184.1
CDS-3UTR GCA 90 bp GGTAGCTCTTCCTACAGGCCATCTGGCCATCAGGCAGTGGGCATGCACTACATGTCCAAAAGATTGAGATaGTCACATACTCGTTTAAGC +
Preference number: 4 (lower is better)
Translates to: GSSSYRPSGHQAVGMHYMSKRLR*SHTRLS
Trigger: GCTTAAACGAGTATGTGAGCATCTCAATCTTTTGGA...CATGTAGTGCATGCCCACTGCCTGATGGCCAGATGGCCTGTAGGAAGAGCTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR GCA 90 bp AAAAATGCACACACCCGAAATGAGTTCAAACCAGCCGAAACAAAACTCAGGCAGACAGGGCAGACGTCCTaGAACTATGTCCTGCCGAAG +
Preference number: 4 (lower is better)
Translates to: KNAHTRNEFKPAETKLRQTGQTS*NYVLPK
Trigger: CTTCGGCAGGACATAGTTGCAGGACGTCTGCCCTGT...CTGCCTGAGTTTTGTTTCGGCTGGTTTGAACTCATTTCGGGTGTGTGCATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp ACTTTCATACTGCTCTTGCTCTCCAGGCCGAATCTTGATGAAAAAGCTACTACGACAGGGCAGACGTCCTaGAACTATGTCCTGCCGAAG +
Preference number: 4 (lower is better)
Translates to: TFILLLLSRPNLDEKATTTGQTS*NYVLPK
Trigger: CTTCGGCAGGACATAGTTGCAGGACGTCTGCCCTGT...CGTAGTAGCTTTTTCATCAAGATTCGGCCTGGAGAGCAAGAGCAGTATGAAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642643.1
ENST00000643155.1
CDS-3UTR GCA 90 bp TCTATACACCAGGCAGGAAAAAGTTGTCTGTCCCTGTACAGCTCAGAAATACTCACAGGGCAGACGTCCTaGAACTATGTCCTGCCGAAG +
Preference number: 4 (lower is better)
Translates to: SIHQAGKSCLSLYSSEILTGQTS*NYVLPK
Trigger: CTTCGGCAGGACATAGTTGCAGGACGTCTGCCCTGT...GAGTATTTCTGAGCTGTACAGGGACAGACAACTTTTTCCTGCCTGGTGTATAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR GCA 90 bp GCCCAGGCTGGTCTTAAACTACTGGACTCAAGTGATCTGCCTGTCTTGGCCTCCTCCTTCCAAGTCCTTTaGTTTATGAAGATCAACTCC +
Preference number: 4 (lower is better)
Translates to: AQAGLKLLDSSDLPVLASSFQVL*FMKINS
Trigger: GGAGTTGATCTTCATAAAGCAAAGGACTTGGAAGGA...GGAGGCCAAGACAGGCAGATCACTTGAGTCCAGTAGTTTAAGACCAGCCTGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000645184.1
ENST00000648181.1
CDS-3UTR GCA 90 bp AGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAGAAGTTCAATGGGGACGCCCGTTTACTTaGTGTACGCTCGAAGTGTGG +
Preference number: 4 (lower is better)
Translates to: RGHHTAITQLKPRTEVQWGRPFT*CTLEVW
Trigger: CCACACTTCGAGCGTACAGCAAGTAAACGGGCGTCC...CCATTGAACTTCTGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR GCA 90 bp CTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGCCGAGGACTTCGGTCTaGCGAATCGACAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: LESLKSDYGRLASLSFCWPRTSV*RIDSCC
Trigger: GCAGCAGCTGTCGATTCGGCAGACCGAAGTCCTCGG...CCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp GGCAGGAAAAAGTTGTCTGTCCCTGTACAGCTCAGAAATACTCATAAAAAGGCCCTGAGTAATGGCAGGTaGAGAAGTGGGCCGAGGACT +
Preference number: 4 (lower is better)
Translates to: GRKKLSVPVQLRNTHKKALSNGR*RSGPRT
Trigger: AGTCCTCGGCCCACTTCTGCACCTGCCATTACTCAG...GGCCTTTTTATGAGTATTTCTGAGCTGTACAGGGACAGACAACTTTTTCCTGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR GCA 90 bp TCTATACACCAGGCAGGAAAAAGTTGTCTGTCCCTGTACAGCTCAGAAATACTCCTGAGTAATGGCAGGTaGAGAAGTGGGCCGAGGACT +
Preference number: 4 (lower is better)
Translates to: SIHQAGKSCLSLYSSEILLSNGR*RSGPRT
Trigger: AGTCCTCGGCCCACTTCTGCACCTGCCATTACTCAG...GAGTATTTCTGAGCTGTACAGGGACAGACAACTTTTTCCTGCCTGGTGTATAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR GCA 90 bp CTTCATCCAATACAAGGGCTTGGCCATTCTCCTCTTAATCATTCTTACCCTATTGGCTCTGGCTCAGCTTaGTCAGGTGGCTCGTCTTCC +
Preference number: 4 (lower is better)
Translates to: LHPIQGLGHSPLNHSYPIGSGSA*SGGSSS
Trigger: GGAAGACGAGCCACCTGAGCAAGCTGAGCCAGAGCC...AATAGGGTAAGAATGATTAAGAGGAGAATGGCCAAGCCCTTGTATTGGATGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636666.1
ENST00000644342.1
ENST00000646800.1
CDS-3UTR GCA 90 bp GGGCTCTTTCCCTCCCTCCTGTTGTTCATGTCTCACATGGGTACCAAAAGAAAATTTTTCCACCTTCCATaGTTCTGTGGGCTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: GLFPSLLLFMSHMGTKRKFFHLP*FCGLWL
Trigger: GAGCCAGAGCCCACAGAAGCATGGAAGGTGGAAAAA...TTTTCTTTTGGTACCCATGTGAGACATGAACAACAGGAGGGAGGGAAAGAGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
CDS-3UTR GCA 90 bp GCCACATTCCTTGTCATTTGGGATGAAAGAAAGGCCCAGGATCAGACAGAAGTATGGGTGCTGCTCCTTTaGCTCCTTGATGGCTTGTAC +
Preference number: 4 (lower is better)
Translates to: ATFLVIWDERKAQDQTEVWVLLL*LLDGLY
Trigger: GTACAAGCCATCAAGGAGGCAAAGGAGCAGCACCCA...TACTTCTGTCTGATCCTGGGCCTTTCTTTCATCCCAAATGACAAGGAATGTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp TCCATTAGAGCTTTTGGCCCAAAGTGCCTATTTTTCTGTGAGATTTGGTCTCCTGTGGATCAGGGCTGGTaGCCTCCCTGGCATTCTGAT +
Preference number: 4 (lower is better)
Translates to: SIRAFGPKCLFFCEIWSPVDQGW*PPWHSD
Trigger: ATCAGAATGCCAGGGAGGGCACCAGCCCTGATCCAC...AGGAGACCAAATCTCACAGAAAAATAGGCACTTTGGGCCAAAAGCTCTAATGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp TCCATTAGAGCTTTTGGCCCAAAGTGCCTATTTTTCTGTGAGATTTGGTCTCCTTTGAGCCCCAGTGACTaGTGCCCGATACCCACTGTC +
Preference number: 4 (lower is better)
Translates to: SIRAFGPKCLFFCEIWSPLSPSD*CPIPTV
Trigger: GACAGTGGGTATCGGGCAGCAGTCACTGGGGCTCAA...AGGAGACCAAATCTCACAGAAAAATAGGCACTTTGGGCCAAAAGCTCTAATGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp CAGCTGACAAGAGTCCTTGGAGGATTTCCCGAAGAATTCCATGGACCCTGTCAGATCAGGCAGTGGGCATaGACTACATGTTCGTTTGAT +
Preference number: 4 (lower is better)
Translates to: QLTRVLGGFPEEFHGPCQIRQWA*TTCSFD
Trigger: ATCAAACGAACATGTAGTGCATGCCCACTGCCTGAT...CTGACAGGGTCCATGGAATTCTTCGGGAAATCCTCCAAGGACTCTTGTCAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR GCA 90 bp GTTGGGAGAAGCAGCTTTAGACATTTCTCTTGCTCACTGCCCTTGAGCCCCAGTATCAGGCAGTGGGCATaGACTACATGTTCGTTTGAT +
Preference number: 4 (lower is better)
Translates to: VGRSSFRHFSCSLPLSPSIRQWA*TTCSFD
Trigger: ATCAAACGAACATGTAGTGCATGCCCACTGCCTGAT...ACTGGGGCTCAAGGGCAGTGAGCAAGAGAAATGTCTAAAGCTGCTTCTCCCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR GCA 90 bp AAAAATGCACACACCCGAAATGAGTTCAAACCAGCCGAAACAAAACTCAGGCAGTGCTTTGTGGGTGGGTaGCAGAGTCCTCATGTGGCT +
Preference number: 4 (lower is better)
Translates to: KNAHTRNEFKPAETKLRQCFVGG*QSPHVA
Trigger: AGCCACATGAGGACTCTGGCACCCACCCACAAAGCA...CTGCCTGAGTTTTGTTTCGGCTGGTTTGAACTCATTTCGGGTGTGTGCATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR GCA 90 bp GAAGCTGGAACTGGGATTCTAAGGAGCCTTGAGGCCAATGTGTTTGTGGGAAGCTATAAATACAGGTCTTaGTTTGTGGGTGGGTGCCAG +
Preference number: 4 (lower is better)
Translates to: EAGTGILRSLEANVFVGSYKYRS*FVGGCQ
Trigger: CTGGCACCCACCCACAAAGCAAGACCTGTATTTATA...GCTTCCCACAAACACATTGGCCTCAAGGCTCCTTAGAATCCCAGTTCCAGCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR GCA 90 bp GTCCAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATACTGAGATCGCGCCACTaGACTCCAGCCTGGGGGACA +
Preference number: 4 (lower is better)
Translates to: VQLRSFYSPCNFCTLLSILRSRH*TPAWGT
Trigger: TGTCCCCCAGGCTGGAGTGCAGTGGCGCGATCTCAG...TATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR GCA 90 bp GGACACATACTTGTCACAAGTGAACTTGAGGTCACAAAGCCATTGATTAAAAACCTGAGATCGCGCCACTaGACTCCAGCCTGGGGGACA +
Preference number: 4 (lower is better)
Translates to: GHILVTSELEVTKPLIKNLRSRH*TPAWGT
Trigger: TGTCCCCCAGGCTGGAGTGCAGTGGCGCGATCTCAG...GTTTTTAATCAATGGCTTTGTGACCTCAAGTTCACTTGTGACAAGTATGTGTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR GCA 90 bp ATTACTTTGGTGCTGCCAATCACTAATTGGGCAATGCCAATAATGAAGCATTCTCTGAGATCGCGCCACTaGACTCCAGCCTGGGGGACA +
Preference number: 4 (lower is better)
Translates to: ITLVLPITNWAMPIMKHSLRSRH*TPAWGT
Trigger: TGTCCCCCAGGCTGGAGTGCAGTGGCGCGATCTCAG...AGAATGCTTCATTATTGGCATTGCCCAATTAGTGATTGGCAGCACCAAAGTAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR CCA 90 bp GGATCAATGAGATCTAGAAGAATCTCTTGGTATAAACTCCCAATAGAAACTGAACAGCCCGACGAACAATaGCAGGAGGAGGCGCCGGCG +
Preference number: 4 (lower is better)
Translates to: GSMRSRRISWYKLPIETEQPDEQ*QEEAPA
Trigger: CGCCGGCGCCTCCTCCTGCCATTGTTCGTCGGGCTG...TTCAGTTTCTATTGGGAGTTTATACCAAGAGATTCTTCTAGATCTCATTGATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343067.9
ENST00000349460.9
CDS-3UTR CCA 90 bp TTCAACACAAGTACACGAACAAACAGGTCTGAAGTATATCAGGAAAACAAAGTACAGCCCGACGAACAATaGCAGGAGGAGGCGCCGGCG +
Preference number: 4 (lower is better)
Translates to: FNTSTRTNRSEVYQENKVQPDEQ*QEEAPA
Trigger: CGCCGGCGCCTCCTCCTGCCATTGTTCGTCGGGCTG...TACTTTGTTTTCCTGATATACTTCAGACCTGTTTGTTCGTGTACTTGTGTTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644600.1
ENST00000644780.1
ENST00000650265.1
CDS-3UTR CCA 90 bp AATCTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCGTCATGATGTTGCGGTaGCTCCGGGGCCGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: NLESLKSDYGRLASLSFCVMMLR*LRGRAP
Trigger: AGGAGCCCGGCCCCGGAGCCACCGCAACATCATGAC...GCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000343067.9
ENST00000349460.9
CDS-3UTR CCA 90 bp AATTGTCCAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCGTCATGATGTTGCGGTaGCTCCGGGGCCGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: NCPIEKFLFPLQFLYSAIVMMLR*LRGRAP
Trigger: AGGAGCCCGGCCCCGGAGCCACCGCAACATCATGAC...GATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTGGACAATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644600.1
CDS-3UTR CCA 90 bp GGTAGCTCTTCCTACAGGCCATCTGGCCATCAGGCAGTGGGCATGCACTACATGCTGTGCTGGGTCAGGTaGATAAAACTTTACATTAAA +
Preference number: 4 (lower is better)
Translates to: GSSSYRPSGHQAVGMHYMLCWVR*IKLYIK
Trigger: TTTAATGTAAAGTTTTATCCACCTGACCCAGCACAG...CATGTAGTGCATGCCCACTGCCTGATGGCCAGATGGCCTGTAGGAAGAGCTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR CCA 90 bp GCATCTTTCCGAGGTCTGTGGATCAGGGCTGGTGCCCTCCCTGGCATTCTGATACTGTGCTGGGTCAGGTaGATAAAACTTTACATTAAA +
Preference number: 4 (lower is better)
Translates to: ASFRGLWIRAGALPGILILCWVR*IKLYIK
Trigger: TTTAATGTAAAGTTTTATCCACCTGACCCAGCACAG...TATCAGAATGCCAGGGAGGGCACCAGCCCTGATCCACAGACCTCGGAAAGATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp CTAGGGAGAGACGCGGAAGTCCCACTAAGCTGGCTTTGGCTTCCAACACAGCTGCTGTGCTGGGTCAGGTaGATAAAACTTTACATTAAA +
Preference number: 4 (lower is better)
Translates to: LGRDAEVPLSWLWLPTQLLCWVR*IKLYIK
Trigger: TTTAATGTAAAGTTTTATCCACCTGACCCAGCACAG...CAGCTGTGTTGGAAGCCAAAGCCAGCTTAGTGGGACTTCCGCGTCTCTCCCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp TCTATACACCAGGCAGGAAAAAGTTGTCTGTCCCTGTACAGCTCAGAAATACTCCACGCCATGGAGTTCTaGGTCGTAGTCTCCCAGTTC +
Preference number: 4 (lower is better)
Translates to: SIHQAGKSCLSLYSSEILHAMEF*VVVSQF
Trigger: GAACTGGGAGACTACGACCCAGAACTCCATGGCGTG...GAGTATTTCTGAGCTGTACAGGGACAGACAACTTTTTCCTGCCTGGTGTATAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CCA 90 bp CTCTTTCCCTCCCTCCTGTTGTTCATGTCTCACATGGGTACCAAAAGAAAAATGCACGCCATGGAGTTCTaGGTCGTAGTCTCCCAGTTC +
Preference number: 4 (lower is better)
Translates to: LFPSLLLFMSHMGTKRKMHAMEF*VVVSQF
Trigger: GAACTGGGAGACTACGACCCAGAACTCCATGGCGTG...CATTTTTCTTTTGGTACCCATGTGAGACATGAACAACAGGAGGGAGGGAAAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp GGCAGGAAAAAGTTGTCTGTCCCTGTACAGCTCAGAAATACTCATAAAAAGGCCCACGCCATGGAGTTCTaGGTCGTAGTCTCCCAGTTC +
Preference number: 4 (lower is better)
Translates to: GRKKLSVPVQLRNTHKKAHAMEF*VVVSQF
Trigger: GAACTGGGAGACTACGACCCAGAACTCCATGGCGTG...GGCCTTTTTATGAGTATTTCTGAGCTGTACAGGGACAGACAACTTTTTCCTGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CCA 90 bp CTAGGGAGAGACGCGGAAGTCCCACTAAGCTGGCTTTGGCTTCCAACACAGCTGCACTGTATCGAAATTTaGATCCTAGCGCAAGAAATT +
Preference number: 4 (lower is better)
Translates to: LGRDAEVPLSWLWLPTQLHCIEI*ILAQEI
Trigger: AATTTCTTGCGCTAGGATCCAAATTTCGATACAGTG...CAGCTGTGTTGGAAGCCAAAGCCAGCTTAGTGGGACTTCCGCGTCTCTCCCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp AGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAGAAGTTCAATGGCCTTCCATGCTTCTGTaGGCTCTGGCTCAGCTTGCT +
Preference number: 4 (lower is better)
Translates to: RGHHTAITQLKPRTEVQWPSMLL*ALAQLA
Trigger: AGCAAGCTGAGCCAGAGCCCACAGAAGCATGGAAGG...CCATTGAACTTCTGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CCA 90 bp GGCAGGAAAAAGTTGTCTGTCCCTGTACAGCTCAGAAATACTCATAAAAAGGCCCCTTCCATGCTTCTGTaGGCTCTGGCTCAGCTTGCT +
Preference number: 4 (lower is better)
Translates to: GRKKLSVPVQLRNTHKKAPSMLL*ALAQLA
Trigger: AGCAAGCTGAGCCAGAGCCCACAGAAGCATGGAAGG...GGCCTTTTTATGAGTATTTCTGAGCTGTACAGGGACAGACAACTTTTTCCTGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CCA 90 bp CTCTTTCCCTCCCTCCTGTTGTTCATGTCTCACATGGGTACCAAAAGAAAAATGCCTTCCATGCTTCTGTaGGCTCTGGCTCAGCTTGCT +
Preference number: 4 (lower is better)
Translates to: LFPSLLLFMSHMGTKRKMPSMLL*ALAQLA
Trigger: AGCAAGCTGAGCCAGAGCCCACAGAAGCATGGAAGG...CATTTTTCTTTTGGTACCCATGTGAGACATGAACAACAGGAGGGAGGGAAAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR CCA 90 bp CCCTTGTCATGTGGTGTCTTGTGGGGAGAACGGCTCCTAAAAGTCAATTCCTTGGCAAGCTTCTGTGTTTaGTCACCATTTGAGGTGGGT +
Preference number: 4 (lower is better)
Translates to: PLSCGVLWGERLLKVNSLASFCV*SPFEVG
Trigger: ACCCACCTCAAATGGTGACCAAACACAGAAGCTTGC...CAAGGAATTGACTTTTAGGAGCCGTTCTCCCCACAAGACACCACATGACAAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
CDS-3UTR CCA 90 bp CAATGCAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAACTAGGCCGTGGTTCTaGTACAGACTCCATGAAGTT +
Preference number: 4 (lower is better)
Translates to: QCRKAGFGQSIATPLYPTTRPWF*YRLHEV
Trigger: AACTTCATGGAGTCTGTACCAGAACCACGGCCTAGT...TGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTGCATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CCA 90 bp CCAACACAGCTGACAAGAGTCCTTGGAGGATTTCCCGAAGAATTCCATGGACCCGGAAGGGTGAGTGAGTaGATAAGCGTTTATCCCATT +
Preference number: 4 (lower is better)
Translates to: PTQLTRVLGGFPEEFHGPGRVSE*ISVYPI
Trigger: AATGGGATAAACGCTTATCCACTCACTCACCCTTCC...GGGTCCATGGAATTCTTCGGGAAATCCTCCAAGGACTCTTGTCAGCTGTGTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR CCA 90 bp CTCTTTCCCTCCCTCCTGTTGTTCATGTCTCACATGGGTACCAAAAGAAAAATGATCTCGGTCTCCTGGTaGACGACCACCTTGGTCACT +
Preference number: 4 (lower is better)
Translates to: LFPSLLLFMSHMGTKRKMISVSW*TTTLVT
Trigger: AGTGACCAAGGTGGTCGTCCACCAGGAGACCGAGAT...CATTTTTCTTTTGGTACCCATGTGAGACATGAACAACAGGAGGGAGGGAAAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp GCCACATTCCTTGTCATTTGGGATGAAAGAAAGGCCCAGGATCAGACAGAAGTAGGAGAAGGGCAGAGTTaGGGTAGGTTAGTTCCTGAG +
Preference number: 4 (lower is better)
Translates to: ATFLVIWDERKAQDQTEVGEGQS*GRLVPE
Trigger: CTCAGGAACTAACCTACCCCAACTCTGCCCTTCTCC...TACTTCTGTCTGATCCTGGGCCTTTCTTTCATCCCAAATGACAAGGAATGTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp CCCTTGTCATGTGGTGTCTTGTGGGGAGAACGGCTCCTAAAAGTCAATTCCTTGTCCCGAAGAATTCCATaGACCCTGTCAGTGTCTGTT +
Preference number: 4 (lower is better)
Translates to: PLSCGVLWGERLLKVNSLSRRIP*TLSVSV
Trigger: AACAGACACTGACAGGGTCCATGGAATTCTTCGGGA...CAAGGAATTGACTTTTAGGAGCCGTTCTCCCCACAAGACACCACATGACAAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp TCCATTAGAGCTTTTGGCCCAAAGTGCCTATTTTTCTGTGAGATTTGGTCTCCTTCTGTGGATCAGGGCTaGTGCCCTCCCTGGCATTCT +
Preference number: 4 (lower is better)
Translates to: SIRAFGPKCLFFCEIWSPSVDQG*CPPWHS
Trigger: AGAATGCCAGGGAGGGCACCAGCCCTGATCCACAGA...AGGAGACCAAATCTCACAGAAAAATAGGCACTTTGGGCCAAAAGCTCTAATGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp CTCTTTCCCTCCCTCCTGTTGTTCATGTCTCACATGGGTACCAAAAGAAAAATGGGGAATGAGCAGGGCTaGGGCTTATACCCCTTGTCA +
Preference number: 4 (lower is better)
Translates to: LFPSLLLFMSHMGTKRKMGNEQG*GLYPLS
Trigger: TGACAAGGGGTATAAGCCCCAGCCCTGCTCATTCCC...CATTTTTCTTTTGGTACCCATGTGAGACATGAACAACAGGAGGGAGGGAAAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp TCCATTAGAGCTTTTGGCCCAAAGTGCCTATTTTTCTGTGAGATTTGGTCTCCTATTTGCTGGGCGTGGTaGTGTGCGCCTGTCATCCCA +
Preference number: 4 (lower is better)
Translates to: SIRAFGPKCLFFCEIWSPICWAW*CAPVIP
Trigger: TGGGATGACAGGCGCACACCACCACGCCCAGCAAAT...AGGAGACCAAATCTCACAGAAAAATAGGCACTTTGGGCCAAAAGCTCTAATGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp GAAGCTGGAACTGGGATTCTAAGGAGCCTTGAGGCCAATGTGTTTGTGGGAAGCAGGCCAATGTGTTTGTaGGAAGCAGTTGGAAGGTTA +
Preference number: 4 (lower is better)
Translates to: EAGTGILRSLEANVFVGSRPMCL*EAVGRL
Trigger: TAACCTTCCAACTGCTTCCCACAAACACATTGGCCT...GCTTCCCACAAACACATTGGCCTCAAGGCTCCTTAGAATCCCAGTTCCAGCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp CTAGGGAGAGACGCGGAAGTCCCACTAAGCTGGCTTTGGCTTCCAACACAGCTGTGTTCATGTCTCACATaGGTACCAAAAGAAAAATGC +
Preference number: 4 (lower is better)
Translates to: LGRDAEVPLSWLWLPTQLCSCLT*VPKEKC
Trigger: GCATTTTTCTTTTGGTACCCATGTGAGACATGAACA...CAGCTGTGTTGGAAGCCAAAGCCAGCTTAGTGGGACTTCCGCGTCTCTCCCTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp AAAAATGCACACACCCGAAATGAGTTCAAACCAGCCGAAACAAAACTCAGGCAGTCTTGTCACCACTCCTaGCAACACGACCAGGCTTGG +
Preference number: 4 (lower is better)
Translates to: KNAHTRNEFKPAETKLRQSCHHS*QHDQAW
Trigger: CCAAGCCTGGTCGTGTTGCCAGGAGTGGTGACAAGA...CTGCCTGAGTTTTGTTTCGGCTGGTTTGAACTCATTTCGGGTGTGTGCATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR CCA 90 bp GCCACATTCCTTGTCATTTGGGATGAAAGAAAGGCCCAGGATCAGACAGAAGTAAACTGTTGCCAGAGATaGAGGAAAGGGGAAGAGGCC +
Preference number: 4 (lower is better)
Translates to: ATFLVIWDERKAQDQTEVNCCQR*RKGEEA
Trigger: GGCCTCTTCCCCTTTCCTCCATCTCTGGCAACAGTT...TACTTCTGTCTGATCCTGGGCCTTTCTTTCATCCCAAATGACAAGGAATGTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR CCA 90 bp GCCCAGGCTGGTCTTAAACTACTGGACTCAAGTGATCTGCCTGTCTTGGCCTCCTCACAATTGGTCATGTaGACAAAGTACTCACTCCTT +
Preference number: 4 (lower is better)
Translates to: AQAGLKLLDSSDLPVLASSQLVM*TKYSLL
Trigger: AAGGAGTGAGTACTTTGTCCACATGACCAATTGTGA...GGAGGCCAAGACAGGCAGATCACTTGAGTCCAGTAGTTTAAGACCAGCCTGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000645184.1
ENST00000648181.1
CDS-3UTR CCA 90 bp CAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAATACACAGAAAAGCTGGCTTTaGGCAGTCCATTGCTACTCC +
Preference number: 4 (lower is better)
Translates to: QKSWLWAVHCYSFVPHNTQKSWL*AVHCYS
Trigger: GGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTG...TGTATTGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
3UTR CAA 72 bp CAAACCAGCCGAAACAAAACTCAGGCAGTGGAGACTTaGGACGGTGTTGGGAGAAGCAGCTTTAGACATTTC +
Preference number: 4 (lower is better)
Translates to: QTSRNKTQAVET*DGVGRSSFRHF
Trigger: GAAATGTCTAAAGCTGCTTCTCCCAACACCGTCCAAAGTCTCCACTGCCTGAGTTTTGTTTCGGCTGGTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp AATCTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCCCGGCTGCTGCTGGCTaGCTGACTAAACGCACCAGC +
Preference number: 4 (lower is better)
Translates to: NLESLKSDYGRLASLSFCPAAAG*LTKRTS
Trigger: GCTGGTGCGTTTAGTCAGTCAGCCAGCAGCAGCCGG...GCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343067.9
ENST00000349460.9
CDS-3UTR TCA 90 bp TCAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTCCTATAATTGCACTGGGCTTCTGTTGGTGCTGTaGATTTTCGGCCTCAGTCAC +
Preference number: 4 (lower is better)
Translates to: SEANHLLVAPNSSYNCTGLLLVL*IFGLSH
Trigger: GTGACTGAGGCCGAAAATTCACAGCACCAACAGAAG...CCCAGTGCAATTATAGGAGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000645184.1
ENST00000648181.1
ENST00000648891.1
CDS-3UTR TCA 90 bp CAAAGTACTCACTCCTTCTCCTGTGGGGATTTGCCCATTGATGTTAAGAGTTCGCTTCTGTTGGTGCTGTaGATTTTCGGCCTCAGTCAC +
Preference number: 4 (lower is better)
Translates to: QSTHSFSCGDLPIDVKSSLLLVL*IFGLSH
Trigger: GTGACTGAGGCCGAAAATTCACAGCACCAACAGAAG...CGAACTCTTAACATCAATGGGCAAATCCCCACAGGAGAAGGAGTGAGTACTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648891.1
CDS-3UTR TCA 90 bp CAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTCCTATAATTGCACTGGGTAGGTTCTTGTTGGCCTaGGTTTATGGCTTCCTCACC +
Preference number: 4 (lower is better)
Translates to: QRLIIYWWLQIAPIIALGRFLLA*VYGFLT
Trigger: GGTGAGGAAGCCATAAACTCAGGCCAACAAGAACCT...ACCCAGTGCAATTATAGGAGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000645184.1
ENST00000648181.1
ENST00000648891.1
CDS-3UTR TCA 90 bp GGCAGGAAAAAGTTGTCTGTCCCTGTACAGCTCAGAAATACTCATAAAAAGGCCCAAGATTCCTCCTGCTaGGGTTCTTGTTGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: GRKKLSVPVQLRNTHKKAQDSSC*GSCWPE
Trigger: CTCAGGCCAACAAGAACCTCAGCAGGAGGAATCTTG...GGCCTTTTTATGAGTATTTCTGAGCTGTACAGGGACAGACAACTTTTTCCTGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp CAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTCCTATAATTGCACTGGGTTCTTCCTCGGACACCTaGGATTTGGGCCTTTTGAGA +
Preference number: 4 (lower is better)
Translates to: QRLIIYWWLQIAPIIALGSSSDT*DLGLLR
Trigger: TCTCAAAAGGCCCAAATCTCAGGTGTCCGAGGAAGA...ACCCAGTGCAATTATAGGAGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648181.1
ENST00000648891.1
CDS-3UTR TCA 90 bp CAGAGACAGTTCTCAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTCCTATTCTTCCTCGGACACCTaGGATTTGGGCCTTTTGAGA +
Preference number: 4 (lower is better)
Translates to: QRQFSEANHLLVAPNSSYSSSDT*DLGLLR
Trigger: TCTCAAAAGGCCCAAATCTCAGGTGTCCGAGGAAGA...ATAGGAGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTGAGAACTGTCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648181.1
ENST00000648891.1
CDS-3UTR TCA 90 bp AAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAATACATACTAAGATGGGTCTGTTTTaGGTTCCGGTTCAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: KAGFGQSIATPLYPTIHTKMGLF*VPVQEL
Trigger: CAGCTCCTGAACCGGAACTCAAAACAGACCCATCTT...AGTATGTATTGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp TCAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTCCTATAATTGCACTGGGAAGATGGGTCTGTTTTaGGTTCCGGTTCAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: SEANHLLVAPNSSYNCTGKMGLF*VPVQEL
Trigger: CAGCTCCTGAACCGGAACTCAAAACAGACCCATCTT...CCCAGTGCAATTATAGGAGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648181.1
ENST00000648891.1
CDS-3UTR TCA 90 bp GAAGCTGGAACTGGGATTCTAAGGAGCCTTGAGGCCAATGTGTTTGTGGGAAGCGCACTGCTTAATGAATaGAGATCCAAAGATGGGTCT +
Preference number: 4 (lower is better)
Translates to: EAGTGILRSLEANVFVGSALLNE*RSKDGS
Trigger: AGACCCATCTTTGGATCTTCATTCATTAAGCAGTGC...GCTTCCCACAAACACATTGGCCTCAAGGCTCCTTAGAATCCCAGTTCCAGCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp GGCTCAGCTTGCTCAGGTGGCTCGTCTTCCTTTTTCACTTCAGCCTTCACTGTTGCACTGCTTAATGAATaGAGATCCAAAGATGGGTCT +
Preference number: 4 (lower is better)
Translates to: GSACSGGSSSFFTSAFTVALLNE*RSKDGS
Trigger: AGACCCATCTTTGGATCTTCATTCATTAAGCAGTGC...AACAGTGAAGGCTGAAGTGAAAAAGGAAGACGAGCCACCTGAGCAAGCTGAGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
CDS-3UTR TCA 90 bp CAGCTGACAAGAGTCCTTGGAGGATTTCCCGAAGAATTCCATGGACCCTGTCAGGCACTGCTTAATGAATaGAGATCCAAAGATGGGTCT +
Preference number: 4 (lower is better)
Translates to: QLTRVLGGFPEEFHGPCQALLNE*RSKDGS
Trigger: AGACCCATCTTTGGATCTTCATTCATTAAGCAGTGC...CTGACAGGGTCCATGGAATTCTTCGGGAAATCCTCCAAGGACTCTTGTCAGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp GGGCTCTTTCCCTCCCTCCTGTTGTTCATGTCTCACATGGGTACCAAAAGAAAAAATCTGGATCTTCTCTaGGTTCTTCCTGAGCAGGCT +
Preference number: 4 (lower is better)
Translates to: GLFPSLLLFMSHMGTKRKNLDLL*VLPEQA
Trigger: AGCCTGCTCAGGAAGAACTCAGAGAAGATCCAGATT...TTTTCTTTTGGTACCCATGTGAGACATGAACAACAGGAGGGAGGGAAAGAGCCC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp CAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAATACAAATCTGGATCTTCTCTaGGTTCTTCCTGAGCAGGCT +
Preference number: 4 (lower is better)
Translates to: QKSWLWAVHCYSFVPHNTNLDLL*VLPEQA
Trigger: AGCCTGCTCAGGAAGAACTCAGAGAAGATCCAGATT...TGTATTGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp GTTGGGAGAAGCAGCTTTAGACATTTCTCTTGCTCACTGCCCTTGAGCCCCAGTACTTATGCAGTTCCATaGCCTTCTCTTCAAGTTCCT +
Preference number: 4 (lower is better)
Translates to: VGRSSFRHFSCSLPLSPSTYAVP*PSLQVP
Trigger: AGGAACTTGAAGAGAAGGTCATGGAACTGCATAAGT...ACTGGGGCTCAAGGGCAGTGAGCAAGAGAAATGTCTAAAGCTGCTTCTCCCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp GAAGCATGTAGCTGCAGAGACAGTTCTCAGAGGCTAATCATCTACTGGTGGCTCAGTCATGGACCTGTATaGCTTATGCAGTTCCATGAC +
Preference number: 4 (lower is better)
Translates to: EACSCRDSSQRLIIYWWLSHGPV*LMQFHD
Trigger: GTCATGGAACTGCATAAGTCATACAGGTCCATGACT...GAGCCACCAGTAGATGATTAGCCTCTGAGAACTGTCTCTGCAGCTACATGCTTC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648181.1
ENST00000648891.1
CDS-3UTR TCA 90 bp CAATGCAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAAGTCATGGACCTGTATaGCTTATGCAGTTCCATGAC +
Preference number: 4 (lower is better)
Translates to: QCRKAGFGQSIATPLYPTSHGPV*LMQFHD
Trigger: GTCATGGAACTGCATAAGTCATACAGGTCCATGACT...TGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTGCATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp ACTATCAAGATCAGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAAACTCCAAGTCAGCCTaGGCTGGAGTCATGGACCTG +
Preference number: 4 (lower is better)
Translates to: TIKIRGHHTAITQLKPRTNSKSA*AGVMDL
Trigger: CAGGTCCATGACTCCAGCTCAGGCTGACTTGGAGTT...TGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCTGATCTTGATAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp GAAGTCAACATGCAAACAGAGGACACATACTTGTCACAAGTGAACTTGAGGTCAAACTCCAAGTCAGCCTaGGCTGGAGTCATGGACCTG +
Preference number: 4 (lower is better)
Translates to: EVNMQTEDTYLSQVNLRSNSKSA*AGVMDL
Trigger: CAGGTCCATGACTCCAGCTCAGGCTGACTTGGAGTT...TGACCTCAAGTTCACTTGTGACAAGTATGTGTCCTCTGTTTGCATGTTGACTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp TTAGGGGCCTCCTTGGTTTACTATATAATTGTGGGGAACCAGTCCAGATATTTCAACTCCAAGTCAGCCTaGGCTGGAGTCATGGACCTG +
Preference number: 4 (lower is better)
Translates to: LGASLVYYIIVGNQSRYFNSKSA*AGVMDL
Trigger: CAGGTCCATGACTCCAGCTCAGGCTGACTTGGAGTT...GAAATATCTGGACTGGTTCCCCACAATTATATAGTAAACCAAGGAGGCCCCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000645184.1
ENST00000648181.1
CDS-3UTR TCA 90 bp AGAAGTCAACATGCAAACAGAGGACACATACTTGTCACAAGTGAACTTGAGGTCAACTCCAAGTCAGCCTaGGCTGGAGTCATGGACCTG +
Preference number: 4 (lower is better)
Translates to: RSQHANRGHILVTSELEVNSKSA*AGVMDL
Trigger: CAGGTCCATGACTCCAGCTCAGGCTGACTTGGAGTT...GACCTCAAGTTCACTTGTGACAAGTATGTGTCCTCTGTTTGCATGTTGACTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp AGTTCTCAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTCCTATAATTGCAAACTCCAAGTCAGCCTaGGCTGGAGTCATGGACCTG +
Preference number: 4 (lower is better)
Translates to: SSQRLIIYWWLQIAPIIANSKSA*AGVMDL
Trigger: CAGGTCCATGACTCCAGCTCAGGCTGACTTGGAGTT...TGCAATTATAGGAGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTGAGAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648181.1
ENST00000648891.1
CDS-3UTR TCA 90 bp GAAGCATGTAGCTGCAGAGACAGTTCTCAGAGGCTAATCATCTACTGGTGGCTCAGCAGACACCTAGGATaGTATCTACTCCTTCCAAGT +
Preference number: 4 (lower is better)
Translates to: EACSCRDSSQRLIIYWWLSRHLG*YLLLPS
Trigger: ACTTGGAAGGAGTAGATATCATCCTAGGTGTCTGCT...GAGCCACCAGTAGATGATTAGCCTCTGAGAACTGTCTCTGCAGCTACATGCTTC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648181.1
ENST00000648891.1
CDS-3UTR TCA 90 bp GAAGCTGGAACTGGGATTCTAAGGAGCCTTGAGGCCAATGTGTTTGTGGGAAGCGGTAACTGGGAAGTTTaGATCCGATGGTACTTTCAT +
Preference number: 4 (lower is better)
Translates to: EAGTGILRSLEANVFVGSGNWEV*IRWYFH
Trigger: ATGAAAGTACCATCGGATTCAAACTTCCCAGTTACC...GCTTCCCACAAACACATTGGCCTCAAGGCTCCTTAGAATCCCAGTTCCAGCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp AAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAATACATACTTGTTTGGTCACCATTTaGGGTGGGTACTGTCACCTC +
Preference number: 4 (lower is better)
Translates to: KAGFGQSIATPLYPTIHTCLVTI*GGYCHL
Trigger: GAGGTGACAGTACCCACCTCAAATGGTGACCAAACA...AGTATGTATTGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp CAATGCAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACACTGGTACAGACTCCATaGAGTTCTTTTTCAGCTCAC +
Preference number: 4 (lower is better)
Translates to: QCRKAGFGQSIATPLYPTLVQTP*SSFSAH
Trigger: GTGAGCTGAAAAAGAACTTCATGGAGTCTGTACCAG...TGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTGCATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp GAATCCGATGGTACTTTCATACTGCTCTTGCTCTCCAGGCCGAATCTTGATGAAGTTCGGAAGGGTGAGTaGGTGGATAAGCGTTTATCC +
Preference number: 4 (lower is better)
Translates to: ESDGTFILLLLSRPNLDEVRKGE*VDKRLS
Trigger: GGATAAACGCTTATCCACTCACTCACCCTTCCGAAC...TTCATCAAGATTCGGCCTGGAGAGCAAGAGCAGTATGAAAGTACCATCGGATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642643.1
ENST00000643155.1
CDS-3UTR TCA 90 bp CAGAGACAGTTCTCAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTCCTATGTTCGGAAGGGTGAGTaGGTGGATAAGCGTTTATCC +
Preference number: 4 (lower is better)
Translates to: QRQFSEANHLLVAPNSSYVRKGE*VDKRLS
Trigger: GGATAAACGCTTATCCACTCACTCACCCTTCCGAAC...ATAGGAGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTGAGAACTGTCTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648181.1
ENST00000648891.1
CDS-3UTR TCA 90 bp CCCTTGTCATGTGGTGTCTTGTGGGGAGAACGGCTCCTAAAAGTCAATTCCTTGACAGTCTTGGTAATTTaGGTTGTGGTGGTGCTGCTT +
Preference number: 4 (lower is better)
Translates to: PLSCGVLWGERLLKVNSLTVLVI*VVVVLL
Trigger: AAGCAGCACCACCACAACTCAAATTACCAAGACTGT...CAAGGAATTGACTTTTAGGAGCCGTTCTCCCCACAAGACACCACATGACAAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp AAAAATGCACACACCCGAAATGAGTTCAAACCAGCCGAAACAAAACTCAGGCAGGGCTTCCAACACAGCTaGCAAGAGTCCTTGGAGGAT +
Preference number: 4 (lower is better)
Translates to: KNAHTRNEFKPAETKLRQGFQHS*QESLED
Trigger: ATCCTCCAAGGACTCTTGTCAGCTGTGTTGGAAGCC...CTGCCTGAGTTTTGTTTCGGCTGGTTTGAACTCATTTCGGGTGTGTGCATTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp CTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGGGGGGAGCACTTAGCTaGGCCACTGCTTCTGATGAG +
Preference number: 4 (lower is better)
Translates to: LESLKSDYGRLASLSFCWGGALS*ATASDE
Trigger: CTCATCAGAAGCAGTGGCTCAGCTAAGTGCTCCCCC...CCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAG
48% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp CAGCTGACAAGAGTCCTTGGAGGATTTCCCGAAGAATTCCATGGACCCTGTCAGACCAGCCTAACAAGGTaGAATCCCGTTTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: QLTRVLGGFPEEFHGPCQTSLTR*NPVSTK
Trigger: TTTAGTAGAAACGGGATTTCACCTTGTTAGGCTGGT...CTGACAGGGTCCATGGAATTCTTCGGGAAATCCTCCAAGGACTCTTGTCAGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp TCCATTAGAGCTTTTGGCCCAAAGTGCCTATTTTTCTGTGAGATTTGGTCTCCTCAACCAGCCTGGGGCTaGGATCCTGGGCAGAAATTT +
Preference number: 4 (lower is better)
Translates to: SIRAFGPKCLFFCEIWSPQPAWG*DPGQKF
Trigger: AAATTTCTGCCCAGGATCTCAGCCCCAGGCTGGTTG...AGGAGACCAAATCTCACAGAAAAATAGGCACTTTGGGCCAAAAGCTCTAATGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR TCA 90 bp GCCACATTCCTTGTCATTTGGGATGAAAGAAAGGCCCAGGATCAGACAGAAGTAAAGATTCTGCCAATCTaGTTCTGCTGCCCGAGTTCC +
Preference number: 4 (lower is better)
Translates to: ATFLVIWDERKAQDQTEVKILPI*FCCPSS
Trigger: GGAACTCGGGCAGCAGAATCAGATTGGCAGAATCTT...TACTTCTGTCTGATCCTGGGCCTTTCTTTCATCCCAAATGACAAGGAATGTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR TCA 90 bp GCTCAGCTTGCTCAGGTGGCTCGTCTTCCTTTTTCACTTCAGCCTTCACTGTTTTCTCTGAGTTCTTCCTaGGCAGGACTTTTAACGATG +
Preference number: 4 (lower is better)
Translates to: AQLAQVARLPFSLQPSLFSLSSS*AGLLTM
Trigger: CATCGTTAAAAGTCCTGCTCAGGAAGAACTCAGAGA...AAACAGTGAAGGCTGAAGTGAAAAAGGAAGACGAGCCACCTGAGCAAGCTGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000643155.1
CDS-3UTR TCA 90 bp CAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAATACAGAGCACCCTGTTTTCTaGTCACAGAAAGACCAACCA +
Preference number: 4 (lower is better)
Translates to: QKSWLWAVHCYSFVPHNTEHPVF*SQKDQP
Trigger: TGGTTGGTCTTTCTGTGATCAGAAAACAGGGTGCTC...TGTATTGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp CAATGCAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAATAGGTAGAGTAGTCTaGGAATTTCAGTCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: QCRKAGFGQSIATPLYPTIGRVV*EFQSWL
Trigger: CAGCCAGGACTGAAATTCTCAGACTACTCTACCTAT...TGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTGCATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp TCTATACACCAGGCAGGAAAAAGTTGTCTGTCCCTGTACAGCTCAGAAATACTCGCATGTGAGTTGTCCTaGAGAGAGAGAGAGTGCCCA +
Preference number: 4 (lower is better)
Translates to: SIHQAGKSCLSLYSSEILACELS*RERECP
Trigger: TGGGCACTCTCTCTCTCTTCAGGACAACTCACATGC...GAGTATTTCTGAGCTGTACAGGGACAGACAACTTTTTCCTGCCTGGTGTATAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp AGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAGAAGTTCAATGGGCATGTGAGTTGTCCTaGAGAGAGAGAGAGTGCCCA +
Preference number: 4 (lower is better)
Translates to: RGHHTAITQLKPRTEVQWACELS*RERECP
Trigger: TGGGCACTCTCTCTCTCTTCAGGACAACTCACATGC...CCATTGAACTTCTGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp AGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAGTCAAGACAAGGCAGAGGTTGCAGTaGGCTGAGATCGCGCCACTG +
Preference number: 4 (lower is better)
Translates to: RSFYSPCNFCTLLSIVKTRQRLQ*AEIAPL
Trigger: CAGTGGCGCGATCTCAGCTCACTGCAACCTCTGCCT...TGTCTTGACTATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR TCA 90 bp AGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAGTCAAGACAGGCCGGAGAATTGCTTaGACCCGGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: RSFYSPCNFCTLLSIVKTGRRIA*TREAEV
Trigger: AACCTCTGCCTCCCGGGTTCAAGCAATTCTCCGGCC...TGTCTTGACTATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR TCA 90 bp TCAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTCCTATAATTGCACTGGGTCTTCTCTGTTGTCATaGTGTTGCTCACCGGTGGCT +
Preference number: 4 (lower is better)
Translates to: SEANHLLVAPNSSYNCTGSSLLS*CCSPVA
Trigger: AGCCACCGGTGAGCAACATCATGACAACAGAGAAGA...CCCAGTGCAATTATAGGAGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648181.1
CDS-3UTR GCA 90 bp GAAGCATGTAGCTGCAGAGACAGTTCTCAGAGGCTAATCATCTACTGGTGGCTCTCTTCCTTCTGTTGGTaGTGTGAATTTTCGGCCTCA +
Preference number: 4 (lower is better)
Translates to: EACSCRDSSQRLIIYWWLSSFCW*CEFSAS
Trigger: TGAGGCCGAAAATTCACAGCACCAACAGAAGGAAGA...GAGCCACCAGTAGATGATTAGCCTCTGAGAACTGTCTCTGCAGCTACATGCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000645184.1
ENST00000648181.1
ENST00000648891.1
CDS-3UTR GCA 90 bp AAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAATACATACTGTCGTGAAAGTCCTCTaGTTTCTGATGTCCGCTCCT +
Preference number: 4 (lower is better)
Translates to: KAGFGQSIATPLYPTIHTVVKVL*FLMSAP
Trigger: AGGAGCGGACATCAGAAAGCAGAGGACTTTCACGAC...AGTATGTATTGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR GCA 90 bp TCAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTCCTATAATTGCACTGGGGTCGTGAAAGTCCTCTaGTTTCTGATGTCCGCTCCT +
Preference number: 4 (lower is better)
Translates to: SEANHLLVAPNSSYNCTGVVKVL*FLMSAP
Trigger: AGGAGCGGACATCAGAAAGCAGAGGACTTTCACGAC...CCCAGTGCAATTATAGGAGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648181.1
ENST00000648891.1
CDS-3UTR GCA 90 bp GGGCTCTTTCCCTCCCTCCTGTTGTTCATGTCTCACATGGGTACCAAAAGAAAACTGACTCTACTTCTTTaGCTTCTTCCTCGGACACCT +
Preference number: 4 (lower is better)
Translates to: GLFPSLLLFMSHMGTKRKLTLLL*LLPRTP
Trigger: AGGTGTCCGAGGAAGAAGGCAAAGAAGTAGAGTCAG...TTTTCTTTTGGTACCCATGTGAGACATGAACAACAGGAGGGAGGGAAAGAGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp TCCAAAGGGGATAAGACTAGGGAGAGACGCGGAAGTCCCACTAAGCTGGCTTTGGCTGTGTTTCTGCACTaGTTAATGAATGAAGATCCA +
Preference number: 4 (lower is better)
Translates to: SKGDKTRERRGSPTKLALAVFLH*LMNEDP
Trigger: TGGATCTTCATTCATTAAGCAGTGCAGAAACACAGC...CAAAGCCAGCTTAGTGGGACTTCCGCGTCTCTCCCTAGTCTTATCCCCTTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp AGAAGTCAACATGCAAACAGAGGACACATACTTGTCACAAGTGAACTTGAGGTCACAGGGCAGACGTCCTaGAACTATGTCCTGCCGAAG +
Preference number: 4 (lower is better)
Translates to: RSQHANRGHILVTSELEVTGQTS*NYVLPK
Trigger: CTTCGGCAGGACATAGTTGCAGGACGTCTGCCCTGT...GACCTCAAGTTCACTTGTGACAAGTATGTGTCCTCTGTTTGCATGTTGACTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR GCA 90 bp ACTATCAAGATCAGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAACAGGGCAGACGTCCTaGAACTATGTCCTGCCGAAG +
Preference number: 4 (lower is better)
Translates to: TIKIRGHHTAITQLKPRTTGQTS*NYVLPK
Trigger: CTTCGGCAGGACATAGTTGCAGGACGTCTGCCCTGT...TGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCTGATCTTGATAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR GCA 90 bp GTTGGGAGAAGCAGCTTTAGACATTTCTCTTGCTCACTGCCCTTGAGCCCCAGTGACCTGTATGACTTATaGAGTTCCATGACCTTCTCT +
Preference number: 4 (lower is better)
Translates to: VGRSSFRHFSCSLPLSPSDLYDL*SSMTFS
Trigger: AGAGAAGGTCATGGAACTGCATAAGTCATACAGGTC...ACTGGGGCTCAAGGGCAGTGAGCAAGAGAAATGTCTAAAGCTGCTTCTCCCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp GAAGCTGGAACTGGGATTCTAAGGAGCCTTGAGGCCAATGTGTTTGTGGGAAGCGACCTGTATGACTTATaGAGTTCCATGACCTTCTCT +
Preference number: 4 (lower is better)
Translates to: EAGTGILRSLEANVFVGSDLYDL*SSMTFS
Trigger: AGAGAAGGTCATGGAACTGCATAAGTCATACAGGTC...GCTTCCCACAAACACATTGGCCTCAAGGCTCCTTAGAATCCCAGTTCCAGCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp TTAAACTTCAATGCAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTGGACGCCCGTTTACTTaGTGTACGCTCGAAGTGTGG +
Preference number: 4 (lower is better)
Translates to: LNFNAEKLALGSPLLLLCGRPFT*CTLEVW
Trigger: CCACACTTCGAGCGTACAGCAAGTAAACGGGCGTCC...ACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTGCATTGAAGTTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR GCA 90 bp AAAGTAGAGGTGGCACTTTTTGAGAGACTTGTGATCCTCAGGGATTGGAATAGAGGACGCCCGTTTACTTaGTGTACGCTCGAAGTGTGG +
Preference number: 4 (lower is better)
Translates to: KVEVALFERLVILRDWNRGRPFT*CTLEVW
Trigger: CCACACTTCGAGCGTACAGCAAGTAAACGGGCGTCC...TCTATTCCAATCCCTGAGGATCACAAGTCTCTCAAAAAGTGCCACCTCTACTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR GCA 90 bp AGAAGTCAACATGCAAACAGAGGACACATACTTGTCACAAGTGAACTTGAGGTCGGACGCCCGTTTACTTaGTGTACGCTCGAAGTGTGG +
Preference number: 4 (lower is better)
Translates to: RSQHANRGHILVTSELEVGRPFT*CTLEVW
Trigger: CCACACTTCGAGCGTACAGCAAGTAAACGGGCGTCC...GACCTCAAGTTCACTTGTGACAAGTATGTGTCCTCTGTTTGCATGTTGACTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR GCA 90 bp GAAGTCAACATGCAAACAGAGGACACATACTTGTCACAAGTGAACTTGAGGTCAGGACGCCCGTTTACTTaGTGTACGCTCGAAGTGTGG +
Preference number: 4 (lower is better)
Translates to: EVNMQTEDTYLSQVNLRSGRPFT*CTLEVW
Trigger: CCACACTTCGAGCGTACAGCAAGTAAACGGGCGTCC...TGACCTCAAGTTCACTTGTGACAAGTATGTGTCCTCTGTTTGCATGTTGACTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR GCA 90 bp GAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGTTTCCGAGGACTTCGGTCTaGCGAATCGACAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: ESLKSDYGRLASLSFCWFPRTSV*RIDSCC
Trigger: GCAGCAGCTGTCGATTCGGCAGACCGAAGTCCTCGG...AAACCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp AGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAGTCAAGACACCGAGGACTTCGGTCTaGCGAATCGACAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: RSFYSPCNFCTLLSIVKTPRTSV*RIDSCC
Trigger: GCAGCAGCTGTCGATTCGGCAGACCGAAGTCCTCGG...TGTCTTGACTATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR GCA 90 bp GTCCAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATACCGAGGACTTCGGTCTaGCGAATCGACAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: VQLRSFYSPCNFCTLLSIPRTSV*RIDSCC
Trigger: GCAGCAGCTGTCGATTCGGCAGACCGAAGTCCTCGG...TATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR GCA 90 bp GAAGTCAACATGCAAACAGAGGACACATACTTGTCACAAGTGAACTTGAGGTCACTGAGTAATGGCAGGTaGAGAAGTGGGCCGAGGACT +
Preference number: 4 (lower is better)
Translates to: EVNMQTEDTYLSQVNLRSLSNGR*RSGPRT
Trigger: AGTCCTCGGCCCACTTCTGCACCTGCCATTACTCAG...TGACCTCAAGTTCACTTGTGACAAGTATGTGTCCTCTGTTTGCATGTTGACTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR GCA 90 bp GAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGTTTGGCTCTGGCTCAGCTTaGTCAGGTGGCTCGTCTTCC +
Preference number: 4 (lower is better)
Translates to: ESLKSDYGRLASLSFCWFGSGSA*SGGSSS
Trigger: GGAAGACGAGCCACCTGAGCAAGCTGAGCCAGAGCC...AAACCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp GTCCAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAGGCTCTGGCTCAGCTTaGTCAGGTGGCTCGTCTTCC +
Preference number: 4 (lower is better)
Translates to: VQLRSFYSPCNFCTLLSIGSGSA*SGGSSS
Trigger: GGAAGACGAGCCACCTGAGCAAGCTGAGCCAGAGCC...TATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644470.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR GCA 90 bp CAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAGTCGGCTCTGGCTCAGCTTaGTCAGGTGGCTCGTCTTCC +
Preference number: 4 (lower is better)
Translates to: QLRSFYSPCNFCTLLSIVGSGSA*SGGSSS
Trigger: GGAAGACGAGCCACCTGAGCAAGCTGAGCCAGAGCC...GACTATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644470.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR GCA 90 bp AGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAGTCAAGACAGGCTCTGGCTCAGCTTaGTCAGGTGGCTCGTCTTCC +
Preference number: 4 (lower is better)
Translates to: RSFYSPCNFCTLLSIVKTGSGSA*SGGSSS
Trigger: GGAAGACGAGCCACCTGAGCAAGCTGAGCCAGAGCC...TGTCTTGACTATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644470.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR GCA 90 bp GAATCCGATGGTACTTTCATACTGCTCTTGCTCTCCAGGCCGAATCTTGATGAATTTTTCCACCTTCCATaGTTCTGTGGGCTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: ESDGTFILLLLSRPNLDEFFHLP*FCGLWL
Trigger: GAGCCAGAGCCCACAGAAGCATGGAAGGTGGAAAAA...TTCATCAAGATTCGGCCTGGAGAGCAAGAGCAGTATGAAAGTACCATCGGATTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643155.1
CDS-3UTR GCA 90 bp TCTTGGATGGGAGAAGGGCAGAGTTGGGGTAGGTTAGTTCCTGAGCTCACTCATTCTCCTGTGGGGATTTaGCCATTGATGTTAAGAGTT +
Preference number: 4 (lower is better)
Translates to: SWMGEGQSWGRLVPELTHSPVGI*PLMLRV
Trigger: AACTCTTAACATCAATGGGCAAATCCCCACAGGAGA...ATGAGTGAGCTCAGGAACTAACCTACCCCAACTCTGCCCTTCTCCCATCCAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643155.1
CDS-3UTR GCA 90 bp CTCTTTCCCTCCCTCCTGTTGTTCATGTCTCACATGGGTACCAAAAGAAAAATGTGGGTGCTGCTCCTTTaGCTCCTTGATGGCTTGTAC +
Preference number: 4 (lower is better)
Translates to: LFPSLLLFMSHMGTKRKMWVLLL*LLDGLY
Trigger: GTACAAGCCATCAAGGAGGCAAAGGAGCAGCACCCA...CATTTTTCTTTTGGTACCCATGTGAGACATGAACAACAGGAGGGAGGGAAAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp CTCTTTCCCTCCCTCCTGTTGTTCATGTCTCACATGGGTACCAAAAGAAAAATGGACATGTCTGGGTGCTaGTCCTTTGCCTCCTTGATG +
Preference number: 4 (lower is better)
Translates to: LFPSLLLFMSHMGTKRKMDMSGC*SFASLM
Trigger: CATCAAGGAGGCAAAGGAGCAGCACCCAGACATGTC...CATTTTTCTTTTGGTACCCATGTGAGACATGAACAACAGGAGGGAGGGAAAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp CTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGCTCAGCAGAGGGCTCTaGCTTACCAAAACCACCCGC +
Preference number: 4 (lower is better)
Translates to: LESLKSDYGRLASLSFCWLSRGL*LTKTTR
Trigger: GCGGGTGGTTTTGGTAAGGCAGAGCCCTCTGCTGAG...CCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp CAGCTGACAAGAGTCCTTGGAGGATTTCCCGAAGAATTCCATGGACCCTGTCAGTTCCCCTGTGTGAAGTaGACACTCTCAAAACTAGAA +
Preference number: 4 (lower is better)
Translates to: QLTRVLGGFPEEFHGPCQFPCVK*TLSKLE
Trigger: TTCTAGTTTTGAGAGTGTGCACTTCACACAGGGGAA...CTGACAGGGTCCATGGAATTCTTCGGGAAATCCTCCAAGGACTCTTGTCAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp GAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGTTTCCGAGATCGCGCCACTaGACTCCAGCTTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: ESLKSDYGRLASLSFCWFPRSRH*TPAWAT
Trigger: TGTTGCCCAAGCTGGAGTGCAGTGGCGCGATCTCGG...AAACCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp CTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGTTGAGCCCCAGTGACTaGTGCCCGATACCCACTGTC +
Preference number: 4 (lower is better)
Translates to: LESLKSDYGRLASLSFCWLSPSD*CPIPTV
Trigger: GACAGTGGGTATCGGGCAGCAGTCACTGGGGCTCAA...CCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp CAGCTGACAAGAGTCCTTGGAGGATTTCCCGAAGAATTCCATGGACCCTGTCAGTCGTTTGATGTAAGCTaGATTTCTTGTCACCACTCC +
Preference number: 4 (lower is better)
Translates to: QLTRVLGGFPEEFHGPCQSFDVS*ISCHHS
Trigger: GGAGTGGTGACAAGAAATGCAGCTTACATCAAACGA...CTGACAGGGTCCATGGAATTCTTCGGGAAATCCTCCAAGGACTCTTGTCAGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR GCA 90 bp GGGCTCTTTCCCTCCCTCCTGTTGTTCATGTCTCACATGGGTACCAAAAGAAAAGAAGGACACCCATCTTaGTGGGCTTGTCCAAATCTA +
Preference number: 4 (lower is better)
Translates to: GLFPSLLLFMSHMGTKRKEGHPS*WACPNL
Trigger: TAGATTTGGACAAGCCCAGCAAGATGGGTGTCCTTC...TTTTCTTTTGGTACCCATGTGAGACATGAACAACAGGAGGGAGGGAAAGAGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR GCA 90 bp GCCACATTCCTTGTCATTTGGGATGAAAGAAAGGCCCAGGATCAGACAGAAGTAAACCCCAAGAACTGTTaGCAGAGATGGAGGAAAGGG +
Preference number: 4 (lower is better)
Translates to: ATFLVIWDERKAQDQTEVNPKNC*QRWRKG
Trigger: CCCTTTCCTCCATCTCTGGCAACAGTTCTTGGGGTT...TACTTCTGTCTGATCCTGGGCCTTTCTTTCATCCCAAATGACAAGGAATGTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR GCA 90 bp AGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAGTCAAGACACCGAGGACTTCGGTCTaGCGAATCGACAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: RSFYSPCNFCTLLSIVKTPRTSV*RIDSCS
Trigger: GGAGCAGCTGTCGATTCGGCAGACCGAAGTCCTCGG...TGTCTTGACTATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000644342.1
ENST00000644470.1
CDS-3UTR GCA 90 bp GGACACATACTTGTCACAAGTGAACTTGAGGTCACAAAGCCATTGATTAAAAACCCTTTAAGAGGTTCCTaGCACTTTGCCCCGCCGGGG +
Preference number: 4 (lower is better)
Translates to: GHILVTSELEVTKPLIKNPLRGS*HFAPPG
Trigger: CCCCGGCGGGGCAAAGTGGCAGGAACCTCTTAAAGG...GTTTTTAATCAATGGCTTTGTGACCTCAAGTTCACTTGTGACAAGTATGTGTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000644342.1
ENST00000646189.1
ENST00000646800.1
CDS-3UTR GCA 90 bp CAGAGACAGTTCTCAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTCCTATCCAGAAGCATGTAGCTaGAGAGACAGTTCTCAGAGG +
Preference number: 4 (lower is better)
Translates to: QRQFSEANHLLVAPNSSYPEACS*RDSSQR
Trigger: CCTCTGAGAACTGTCTCTGCAGCTACATGCTTCTGG...ATAGGAGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTGAGAACTGTCTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648181.1
ENST00000648891.1
CDS-3UTR CCA 90 bp GAGACATTAACCAAATCATCCATATTGGTACATTCAAGTGCCATAAAAAGCAAGGTCATGATGTTGCGGTaGCTCCGGGGCCGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: ETLTKSSILVHSSAIKSKVMMLR*LRGRAP
Trigger: AGGAGCCCGGCCCCGGAGCCACCGCAACATCATGAC...CTTGCTTTTTATGGCACTTGAATGTACCAATATGGATGATTTGGTTAATGTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644600.1
ENST00000644780.1
ENST00000650265.1
CDS-3UTR CCA 90 bp GCATCTTTCCGAGGTCTGTGGATCAGGGCTGGTGCCCTCCCTGGCATTCTGATATCTCTTCATCAAGACTaGTTCCAAATTCTATCTCTT +
Preference number: 4 (lower is better)
Translates to: ASFRGLWIRAGALPGILISLHQD*FQILSL
Trigger: AAGAGATAGAATTTGGAACCAGTCTTGATGAAGAGA...TATCAGAATGCCAGGGAGGGCACCAGCCCTGATCCACAGACCTCGGAAAGATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp TTTGAGCTGTCAGCAAGACTCCTGGGTCCAAGTCTCCACTGTTGTCGTCAGTCTATGAAGATCCAAAGATaGGTCTGTTTTGAGTTCCGG +
Preference number: 4 (lower is better)
Translates to: FELSARLLGPSLHCCRQSMKIQR*VCFEFR
Trigger: CCGGAACTCAAAACAGACCCATCTTTGGATCTTCAT...AGACTGACGACAACAGTGGAGACTTGGACCCAGGAGTCTTGCTGACAGCTCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643155.1
CDS-3UTR CCA 90 bp GCATCTTTCCGAGGTCTGTGGATCAGGGCTGGTGCCCTCCCTGGCATTCTGATACTTTTACTTCTATTTTaGAGCACTCTTCAAGTCCTT +
Preference number: 4 (lower is better)
Translates to: ASFRGLWIRAGALPGILILLLLF*STLQVL
Trigger: AAGGACTTGAAGAGTGCTCCAAAATAGAAGTAAAAG...TATCAGAATGCCAGGGAGGGCACCAGCCCTGATCCACAGACCTCGGAAAGATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp GTACGCTCGAAGTGTGGGGCAGGCCTGTCAATTAGAGCACTAGCTTGCCTGGTCCTTTTACTTCTATTTTaGAGCACTCTTCAAGTCCTT +
Preference number: 4 (lower is better)
Translates to: VRSKCGAGLSIRALACLVLLLLF*STLQVL
Trigger: AAGGACTTGAAGAGTGCTCCAAAATAGAAGTAAAAG...GACCAGGCAAGCTAGTGCTCTAATTGACAGGCCTGCCCCACACTTCGAGCGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
CDS-3UTR CCA 90 bp GGTAGCTCTTCCTACAGGCCATCTGGCCATCAGGCAGTGGGCATGCACTACATGCTTTTACTTCTATTTTaGAGCACTCTTCAAGTCCTT +
Preference number: 4 (lower is better)
Translates to: GSSSYRPSGHQAVGMHYMLLLLF*STLQVL
Trigger: AAGGACTTGAAGAGTGCTCCAAAATAGAAGTAAAAG...CATGTAGTGCATGCCCACTGCCTGATGGCCAGATGGCCTGTAGGAAGAGCTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR CCA 90 bp GCCCAGGCTGGTCTTAAACTACTGGACTCAAGTGATCTGCCTGTCTTGGCCTCCCTGTGCTGGGTCAGGTaGATAAAACTTTACATTAAA +
Preference number: 4 (lower is better)
Translates to: AQAGLKLLDSSDLPVLASLCWVR*IKLYIK
Trigger: TTTAATGTAAAGTTTTATCCACCTGACCCAGCACAG...GGAGGCCAAGACAGGCAGATCACTTGAGTCCAGTAGTTTAAGACCAGCCTGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000645184.1
ENST00000648181.1
CDS-3UTR CCA 90 bp GAAGTCAACATGCAAACAGAGGACACATACTTGTCACAAGTGAACTTGAGGTCACACGCCATGGAGTTCTaGGTCGTAGTCTCCCAGTTC +
Preference number: 4 (lower is better)
Translates to: EVNMQTEDTYLSQVNLRSHAMEF*VVVSQF
Trigger: GAACTGGGAGACTACGACCCAGAACTCCATGGCGTG...TGACCTCAAGTTCACTTGTGACAAGTATGTGTCCTCTGTTTGCATGTTGACTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CCA 90 bp TTAAACTTCAATGCAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTCACGCCATGGAGTTCTaGGTCGTAGTCTCCCAGTTC +
Preference number: 4 (lower is better)
Translates to: LNFNAEKLALGSPLLLLCHAMEF*VVVSQF
Trigger: GAACTGGGAGACTACGACCCAGAACTCCATGGCGTG...ACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTGCATTGAAGTTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CCA 90 bp AGTTCTCAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTCCTATAATTGCACACGCCATGGAGTTCTaGGTCGTAGTCTCCCAGTTC +
Preference number: 4 (lower is better)
Translates to: SSQRLIIYWWLQIAPIIAHAMEF*VVVSQF
Trigger: GAACTGGGAGACTACGACCCAGAACTCCATGGCGTG...TGCAATTATAGGAGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTGAGAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648181.1
ENST00000648891.1
CDS-3UTR CCA 90 bp AAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAATACATACTCTCAGCTTGCTCAGGTaGCTCGTCTTCCTTTTTCAC +
Preference number: 4 (lower is better)
Translates to: KAGFGQSIATPLYPTIHTLSLLR*LVFLFH
Trigger: GTGAAAAAGGAAGACGAGCCACCTGAGCAAGCTGAG...AGTATGTATTGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CCA 90 bp CAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTCCTATAATTGCACTGGGTCTCAGCTTGCTCAGGTaGCTCGTCTTCCTTTTTCAC +
Preference number: 4 (lower is better)
Translates to: QRLIIYWWLQIAPIIALGLSLLR*LVFLFH
Trigger: GTGAAAAAGGAAGACGAGCCACCTGAGCAAGCTGAG...ACCCAGTGCAATTATAGGAGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648181.1
ENST00000648891.1
CDS-3UTR CCA 90 bp TTAAACTTCAATGCAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTCCTTCCATGCTTCTGTaGGCTCTGGCTCAGCTTGCT +
Preference number: 4 (lower is better)
Translates to: LNFNAEKLALGSPLLLLCPSMLL*ALAQLA
Trigger: AGCAAGCTGAGCCAGAGCCCACAGAAGCATGGAAGG...ACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTGCATTGAAGTTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CCA 90 bp TCCATTAGAGCTTTTGGCCCAAAGTGCCTATTTTTCTGTGAGATTTGGTCTCCTCCTTCCATGCTTCTGTaGGCTCTGGCTCAGCTTGCT +
Preference number: 4 (lower is better)
Translates to: SIRAFGPKCLFFCEIWSPPSMLL*ALAQLA
Trigger: AGCAAGCTGAGCCAGAGCCCACAGAAGCATGGAAGG...AGGAGACCAAATCTCACAGAAAAATAGGCACTTTGGGCCAAAAGCTCTAATGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR CCA 90 bp ACTATCAAGATCAGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACACCTTCCATGCTTCTGTaGGCTCTGGCTCAGCTTGCT +
Preference number: 4 (lower is better)
Translates to: TIKIRGHHTAITQLKPRTPSMLL*ALAQLA
Trigger: AGCAAGCTGAGCCAGAGCCCACAGAAGCATGGAAGG...TGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCTGATCTTGATAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CCA 90 bp AAAGTAGAGGTGGCACTTTTTGAGAGACTTGTGATCCTCAGGGATTGGAATAGACCTTCCATGCTTCTGTaGGCTCTGGCTCAGCTTGCT +
Preference number: 4 (lower is better)
Translates to: KVEVALFERLVILRDWNRPSMLL*ALAQLA
Trigger: AGCAAGCTGAGCCAGAGCCCACAGAAGCATGGAAGG...TCTATTCCAATCCCTGAGGATCACAAGTCTCTCAAAAAGTGCCACCTCTACTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR CCA 90 bp GAAGTCAACATGCAAACAGAGGACACATACTTGTCACAAGTGAACTTGAGGTCACCTTCCATGCTTCTGTaGGCTCTGGCTCAGCTTGCT +
Preference number: 4 (lower is better)
Translates to: EVNMQTEDTYLSQVNLRSPSMLL*ALAQLA
Trigger: AGCAAGCTGAGCCAGAGCCCACAGAAGCATGGAAGG...TGACCTCAAGTTCACTTGTGACAAGTATGTGTCCTCTGTTTGCATGTTGACTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CCA 90 bp GGGCTCTTTCCCTCCCTCCTGTTGTTCATGTCTCACATGGGTACCAAAAGAAAAGCAAGCTTCTGTGTTTaGTCACCATTTGAGGTGGGT +
Preference number: 4 (lower is better)
Translates to: GLFPSLLLFMSHMGTKRKASFCV*SPFEVG
Trigger: ACCCACCTCAAATGGTGACCAAACACAGAAGCTTGC...TTTTCTTTTGGTACCCATGTGAGACATGAACAACAGGAGGGAGGGAAAGAGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
CDS-3UTR CCA 90 bp AGGCCGTGGTTCTGGTACAGACTCCATGAAGTTCTTTTTCAGCTCACTGATGCTACTAGGCCGTGGTTCTaGTACAGACTCCATGAAGTT +
Preference number: 4 (lower is better)
Translates to: RPWFWYRLHEVLFQLTDATRPWF*YRLHEV
Trigger: AACTTCATGGAGTCTGTACCAGAACCACGGCCTAGT...AGCATCAGTGAGCTGAAAAAGAACTTCATGGAGTCTGTACCAGAACCACGGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
CDS-3UTR CCA 90 bp AAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAATACATACTCCATTCACTAGGCCGTaGTTCTGGTACAGACTCCAT +
Preference number: 4 (lower is better)
Translates to: KAGFGQSIATPLYPTIHTPFTRP*FWYRLH
Trigger: ATGGAGTCTGTACCAGAACCACGGCCTAGTGAATGG...AGTATGTATTGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CCA 90 bp GCCACATTCCTTGTCATTTGGGATGAAAGAAAGGCCCAGGATCAGACAGAAGTACCATTCACTAGGCCGTaGTTCTGGTACAGACTCCAT +
Preference number: 4 (lower is better)
Translates to: ATFLVIWDERKAQDQTEVPFTRP*FWYRLH
Trigger: ATGGAGTCTGTACCAGAACCACGGCCTAGTGAATGG...TACTTCTGTCTGATCCTGGGCCTTTCTTTCATCCCAAATGACAAGGAATGTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR CCA 90 bp CAATGCAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAGGAAGGGTGAGTGAGTaGATAAGCGTTTATCCCATT +
Preference number: 4 (lower is better)
Translates to: QCRKAGFGQSIATPLYPTGRVSE*ISVYPI
Trigger: AATGGGATAAACGCTTATCCACTCACTCACCCTTCC...TGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTGCATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CCA 90 bp CTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGGCAATCTCGGTCTCCTaGTGGACGACCACCTTGGTC +
Preference number: 4 (lower is better)
Translates to: LESLKSDYGRLASLSFCWAISVS*WTTTLV
Trigger: GACCAAGGTGGTCGTCCACCAGGAGACCGAGATTGC...CCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp ACTTTCATACTGCTCTTGCTCTCCAGGCCGAATCTTGATGAAAAAGCTACTACGGGAGAAGGGCAGAGTTaGGGTAGGTTAGTTCCTGAG +
Preference number: 4 (lower is better)
Translates to: TFILLLLSRPNLDEKATTGEGQS*GRLVPE
Trigger: CTCAGGAACTAACCTACCCCAACTCTGCCCTTCTCC...CGTAGTAGCTTTTTCATCAAGATTCGGCCTGGAGAGCAAGAGCAGTATGAAAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643155.1
CDS-3UTR CCA 90 bp AAAAATGCACACACCCGAAATGAGTTCAAACCAGCCGAAACAAAACTCAGGCAGGGAGAAGGGCAGAGTTaGGGTAGGTTAGTTCCTGAG +
Preference number: 4 (lower is better)
Translates to: KNAHTRNEFKPAETKLRQGEGQS*GRLVPE
Trigger: CTCAGGAACTAACCTACCCCAACTCTGCCCTTCTCC...CTGCCTGAGTTTTGTTTCGGCTGGTTTGAACTCATTTCGGGTGTGTGCATTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp AAAAATGCACACACCCGAAATGAGTTCAAACCAGCCGAAACAAAACTCAGGCAGCTGGTTTCTCTTGGATaGGAGAAGGGCAGAGTTGGG +
Preference number: 4 (lower is better)
Translates to: KNAHTRNEFKPAETKLRQLVSLG*EKGRVG
Trigger: CCCAACTCTGCCCTTCTCCCATCCAAGAGAAACCAG...CTGCCTGAGTTTTGTTTCGGCTGGTTTGAACTCATTTCGGGTGTGTGCATTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp CTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGTCTTTCCGAGGTCTGTaGATCAGGGCTGGTGCCCTC +
Preference number: 4 (lower is better)
Translates to: LESLKSDYGRLASLSFCWSFRGL*IRAGAL
Trigger: GAGGGCACCAGCCCTGATCCACAGACCTCGGAAAGA...CCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp CCAACACAGCTGACAAGAGTCCTTGGAGGATTTCCCGAAGAATTCCATGGACCCTTTTTCTGTGAGATTTaGTCTCCTGAGATGGGAGCT +
Preference number: 4 (lower is better)
Translates to: PTQLTRVLGGFPEEFHGPFFCEI*SPEMGA
Trigger: AGCTCCCATCTCAGGAGACCAAATCTCACAGAAAAA...GGGTCCATGGAATTCTTCGGGAAATCCTCCAAGGACTCTTGTCAGCTGTGTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp TCCATTAGAGCTTTTGGCCCAAAGTGCCTATTTTTCTGTGAGATTTGGTCTCCTTCTTGTCACCACTCCTaGCAACACGACCAGGCTTGG +
Preference number: 4 (lower is better)
Translates to: SIRAFGPKCLFFCEIWSPSCHHS*QHDQAW
Trigger: CCAAGCCTGGTCGTGTTGCCAGGAGTGGTGACAAGA...AGGAGACCAAATCTCACAGAAAAATAGGCACTTTGGGCCAAAAGCTCTAATGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR CCA 90 bp CTCTTTCCCTCCCTCCTGTTGTTCATGTCTCACATGGGTACCAAAAGAAAAATGAAAGGGGAAGAGGCCTaGAAGGACACCCATCTTGCT +
Preference number: 4 (lower is better)
Translates to: LFPSLLLFMSHMGTKRKMKGEEA*KDTHLA
Trigger: AGCAAGATGGGTGTCCTTCCAGGCCTCTTCCCCTTT...CATTTTTCTTTTGGTACCCATGTGAGACATGAACAACAGGAGGGAGGGAAAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR CCA 90 bp CAGATATCTGAAGCAACTTCCATGTCTTTGACCCAAAGAAGCTCCAAAAAGAAAGTCAGGCCGCAGCTCTaGCTCCAGTTCCCGAGGTTT +
Preference number: 4 (lower is better)
Translates to: QISEATSMSLTQRSSKKKVRPQL*LQFPRF
Trigger: AAACCTCGGGAACTGGAGCCAGAGCTGCGGCCTGAC...TTTCTTTTTGGAGCTTCTTTGGGTCAAAGACATGGAAGTTGCTTCAGATATCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR CCA 90 bp GAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGTTTGTCAGGCCGCAGCTCTaGCTCCAGTTCCCGAGGTTT +
Preference number: 4 (lower is better)
Translates to: ESLKSDYGRLASLSFCWFVRPQL*LQFPRF
Trigger: AAACCTCGGGAACTGGAGCCAGAGCTGCGGCCTGAC...AAACCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR CCA 90 bp TCCATTAGAGCTTTTGGCCCAAAGTGCCTATTTTTCTGTGAGATTTGGTCTCCTCTGGGGCTGAGATCCTaGGCAGAAATTTCCCGTGAG +
Preference number: 4 (lower is better)
Translates to: SIRAFGPKCLFFCEIWSPLGLRS*AEISRE
Trigger: CTCACGGGAAATTTCTGCCCAGGATCTCAGCCCCAG...AGGAGACCAAATCTCACAGAAAAATAGGCACTTTGGGCCAAAAGCTCTAATGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR CCA 90 bp TCTTGGATGGGAGAAGGGCAGAGTTGGGGTAGGTTAGTTCCTGAGCTCACTCATCTCTTTTTCTGTGTTTaGTCACCATTTGAGGTGGGT +
Preference number: 4 (lower is better)
Translates to: SWMGEGQSWGRLVPELTHLFFCV*SPFEVG
Trigger: ACCCACCTCAAATGGTGACCAAACACAGAAAAAGAG...ATGAGTGAGCTCAGGAACTAACCTACCCCAACTCTGCCCTTCTCCCATCCAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643155.1
CDS-3UTR CCA 90 bp CTCTGGCTCAGCTTGCTCAGGTGGCTCGTCTTCCTTTTTCACTTCAGCCTTCACTCACAATTGGTCATGTaGACAAAGTACTCACTCCTT +
Preference number: 4 (lower is better)
Translates to: LWLSLLRWLVFLFHFSLHSQLVM*TKYSLL
Trigger: AAGGAGTGAGTACTTTGTCCACATGACCAATTGTGA...GTGAAGGCTGAAGTGAAAAAGGAAGACGAGCCACCTGAGCAAGCTGAGCCAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642643.1
ENST00000648891.1
CDS-3UTR CCA 90 bp CAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAATACATCAATGCAGAAAAGCTaGCTTTGGGCAGTCCATTGC +
Preference number: 4 (lower is better)
Translates to: QKSWLWAVHCYSFVPHNTSMQKS*LWAVHC
Trigger: GCAATGGACTGCCCAAAGCCAGCTTTTCTGCATTGA...TGTATTGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CCA 90 bp ACTATCAAGATCAGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAAATTTCAGTCCTGGCTaGAGGCTAAGGGGCACCAGC +
Preference number: 4 (lower is better)
Translates to: TIKIRGHHTAITQLKPRTNFSPG*RLRGTS
Trigger: GCTGGTGCCCCTTAGCCTCCAGCCAGGACTGAAATT...TGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCTGATCTTGATAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CCA 90 bp GGCAGGAAAAAGTTGTCTGTCCCTGTACAGCTCAGAAATACTCATAAAAAGGCCGTAGCTAGGGGACTCTaGCCCACCAACCTTTCTTTC +
Preference number: 4 (lower is better)
Translates to: GRKKLSVPVQLRNTHKKAVARGL*PTNLSF
Trigger: GAAAGAAAGGTTGGTGGGCCAGAGTCCCCTAGCTAC...GGCCTTTTTATGAGTATTTCTGAGCTGTACAGGGACAGACAACTTTTTCCTGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000643173.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
CDS-3UTR CCA 90 bp TTAGGGGCCTCCTTGGTTTACTATATAATTGTGGGGAACCAGTCCAGATATTTCGGCTCACTGCAGCCTTaGTCTCCTGGCTCAAGCAAT +
Preference number: 4 (lower is better)
Translates to: LGASLVYYIIVGNQSRYFGSLQP*SPGSSN
Trigger: ATTGCTTGAGCCAGGAGACCAAGGCTGCAGTGAGCC...GAAATATCTGGACTGGTTCCCCACAATTATATAGTAAACCAAGGAGGCCCCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645184.1
CDS-3UTR TCA 90 bp AATCTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCCTGCTGCTGGCTGACTaGCTAAACGCACCAGCGGAG +
Preference number: 4 (lower is better)
Translates to: NLESLKSDYGRLASLSFCLLLAD*LNAPAE
Trigger: CTCCGCTGGTGCGTTTAGTCAGTCAGCCAGCAGCAG...GCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343067.9
ENST00000349460.9
CDS-3UTR TCA 90 bp GAGACATTAACCAAATCATCCATATTGGTACATTCAAGTGCCATAAAAAGCAAGCCGGCTGCTGCTGGCTaGCTGACTAAACGCACCAGC +
Preference number: 4 (lower is better)
Translates to: ETLTKSSILVHSSAIKSKPAAAG*LTKRTS
Trigger: GCTGGTGCGTTTAGTCAGTCAGCCAGCAGCAGCCGG...CTTGCTTTTTATGGCACTTGAATGTACCAATATGGATGATTTGGTTAATGTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644600.1
ENST00000644780.1
ENST00000650265.1
CDS-3UTR TCA 90 bp CTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGTCTTCTCTGTTGTCATaGTGTTGCGGTGGCTCCGGG +
Preference number: 4 (lower is better)
Translates to: LESLKSDYGRLASLSFCWSSLLS*CCGGSG
Trigger: CCCGGAGCCACCGCAACATCATGACAACAGAGAAGA...CCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000343067.9
ENST00000349460.9
CDS-3UTR TCA 90 bp CAGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAGAAGTTCAATGCTTCTGTTGGTGCTGTaGATTTTCGGCCTCAGTCAC +
Preference number: 4 (lower is better)
Translates to: QRASYSNNTVEAKDRSSMLLLVL*IFGLSH
Trigger: GTGACTGAGGCCGAAAATTCACAGCACCAACAGAAG...CATTGAACTTCTGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp AGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAGAAGTTCAATGGAGGTTCTTGTTGGCCTaGGTTTATGGCTTCCTCACC +
Preference number: 4 (lower is better)
Translates to: RGHHTAITQLKPRTEVQWRFLLA*VYGFLT
Trigger: GGTGAGGAAGCCATAAACTCAGGCCAACAAGAACCT...CCATTGAACTTCTGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp AGAAGTCAACATGCAAACAGAGGACACATACTTGTCACAAGTGAACTTGAGGTCCAAGATTCCTCCTGCTaGGGTTCTTGTTGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: RSQHANRGHILVTSELEVQDSSC*GSCWPE
Trigger: CTCAGGCCAACAAGAACCTCAGCAGGAGGAATCTTG...GACCTCAAGTTCACTTGTGACAAGTATGTGTCCTCTGTTTGCATGTTGACTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp AGTTCTCAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTCCTATAATTGCACAAGATTCCTCCTGCTaGGGTTCTTGTTGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: SSQRLIIYWWLQIAPIIAQDSSC*GSCWPE
Trigger: CTCAGGCCAACAAGAACCTCAGCAGGAGGAATCTTG...TGCAATTATAGGAGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTGAGAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000645184.1
ENST00000648181.1
ENST00000648891.1
CDS-3UTR TCA 90 bp TCCATTAGAGCTTTTGGCCCAAAGTGCCTATTTTTCTGTGAGATTTGGTCTCCTCAAGATTCCTCCTGCTaGGGTTCTTGTTGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: SIRAFGPKCLFFCEIWSPQDSSC*GSCWPE
Trigger: CTCAGGCCAACAAGAACCTCAGCAGGAGGAATCTTG...AGGAGACCAAATCTCACAGAAAAATAGGCACTTTGGGCCAAAAGCTCTAATGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp GCCACATTCCTTGTCATTTGGGATGAAAGAAAGGCCCAGGATCAGACAGAAGTAAAGTCCTCTGCTTTCTaGTGTCCGCTCCTTGTTCTT +
Preference number: 4 (lower is better)
Translates to: ATFLVIWDERKAQDQTEVKSSAF*CPLLVL
Trigger: AAGAACAAGGAGCGGACATCAGAAAGCAGAGGACTT...TACTTCTGTCTGATCCTGGGCCTTTCTTTCATCCCAAATGACAAGGAATGTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp CAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTCCTATAATTGCACTGGGTAAGTCCTCTGCTTTCTaGTGTCCGCTCCTTGTTCTT +
Preference number: 4 (lower is better)
Translates to: QRLIIYWWLQIAPIIALGKSSAF*CPLLVL
Trigger: AAGAACAAGGAGCGGACATCAGAAAGCAGAGGACTT...ACCCAGTGCAATTATAGGAGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648181.1
ENST00000648891.1
CDS-3UTR TCA 90 bp AAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAATACATACTAAGTCCTCTGCTTTCTaGTGTCCGCTCCTTGTTCTT +
Preference number: 4 (lower is better)
Translates to: KAGFGQSIATPLYPTIHTKSSAF*CPLLVL
Trigger: AAGAACAAGGAGCGGACATCAGAAAGCAGAGGACTT...AGTATGTATTGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp GGGCTCTTTCCCTCCCTCCTGTTGTTCATGTCTCACATGGGTACCAAAAGAAAAGAGATTTGGGCCTTTTaGGAAACGAGGAGAATAGTC +
Preference number: 4 (lower is better)
Translates to: GLFPSLLLFMSHMGTKRKEIWAF*ETRRIV
Trigger: GACTATTCTCCTCGTTTCTCAAAAGGCCCAAATCTC...TTTTCTTTTGGTACCCATGTGAGACATGAACAACAGGAGGGAGGGAAAGAGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp AGCTGCAGAGACAGTTCTCAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTGAGATTTGGGCCTTTTaGGAAACGAGGAGAATAGTC +
Preference number: 4 (lower is better)
Translates to: SCRDSSQRLIIYWWLQIAEIWAF*ETRRIV
Trigger: GACTATTCTCCTCGTTTCTCAAAAGGCCCAAATCTC...AGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTGAGAACTGTCTCTGCAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648181.1
ENST00000648891.1
CDS-3UTR TCA 90 bp CAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAATACAGAGATTTGGGCCTTTTaGGAAACGAGGAGAATAGTC +
Preference number: 4 (lower is better)
Translates to: QKSWLWAVHCYSFVPHNTEIWAF*ETRRIV
Trigger: GACTATTCTCCTCGTTTCTCAAAAGGCCCAAATCTC...TGTATTGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp TCTATACACCAGGCAGGAAAAAGTTGTCTGTCCCTGTACAGCTCAGAAATACTCTCTTCCTCGGACACCTaGGATTTGGGCCTTTTGAGA +
Preference number: 4 (lower is better)
Translates to: SIHQAGKSCLSLYSSEILSSSDT*DLGLLR
Trigger: TCTCAAAAGGCCCAAATCTCAGGTGTCCGAGGAAGA...GAGTATTTCTGAGCTGTACAGGGACAGACAACTTTTTCCTGCCTGGTGTATAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp GGCAGGAAAAAGTTGTCTGTCCCTGTACAGCTCAGAAATACTCATAAAAAGGCCTCTTCCTCGGACACCTaGGATTTGGGCCTTTTGAGA +
Preference number: 4 (lower is better)
Translates to: GRKKLSVPVQLRNTHKKASSSDT*DLGLLR
Trigger: TCTCAAAAGGCCCAAATCTCAGGTGTCCGAGGAAGA...GGCCTTTTTATGAGTATTTCTGAGCTGTACAGGGACAGACAACTTTTTCCTGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp AGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAGAAGTTCAATGGTCTTCCTCGGACACCTaGGATTTGGGCCTTTTGAGA +
Preference number: 4 (lower is better)
Translates to: RGHHTAITQLKPRTEVQWSSSDT*DLGLLR
Trigger: TCTCAAAAGGCCCAAATCTCAGGTGTCCGAGGAAGA...CCATTGAACTTCTGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp CTCTTTCCCTCCCTCCTGTTGTTCATGTCTCACATGGGTACCAAAAGAAAAATGAAGATGGGTCTGTTTTaGGTTCCGGTTCAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: LFPSLLLFMSHMGTKRKMKMGLF*VPVQEL
Trigger: CAGCTCCTGAACCGGAACTCAAAACAGACCCATCTT...CATTTTTCTTTTGGTACCCATGTGAGACATGAACAACAGGAGGGAGGGAAAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp GGCAGGAAAAAGTTGTCTGTCCCTGTACAGCTCAGAAATACTCATAAAAAGGCCAAGATGGGTCTGTTTTaGGTTCCGGTTCAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: GRKKLSVPVQLRNTHKKAKMGLF*VPVQEL
Trigger: CAGCTCCTGAACCGGAACTCAAAACAGACCCATCTT...GGCCTTTTTATGAGTATTTCTGAGCTGTACAGGGACAGACAACTTTTTCCTGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp CCCTTGTCATGTGGTGTCTTGTGGGGAGAACGGCTCCTAAAAGTCAATTCCTTGGCACTGCTTAATGAATaGAGATCCAAAGATGGGTCT +
Preference number: 4 (lower is better)
Translates to: PLSCGVLWGERLLKVNSLALLNE*RSKDGS
Trigger: AGACCCATCTTTGGATCTTCATTCATTAAGCAGTGC...CAAGGAATTGACTTTTAGGAGCCGTTCTCCCCACAAGACACCACATGACAAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp GAAGCATGTAGCTGCAGAGACAGTTCTCAGAGGCTAATCATCTACTGGTGGCTCGCACTGCTTAATGAATaGAGATCCAAAGATGGGTCT +
Preference number: 4 (lower is better)
Translates to: EACSCRDSSQRLIIYWWLALLNE*RSKDGS
Trigger: AGACCCATCTTTGGATCTTCATTCATTAAGCAGTGC...GAGCCACCAGTAGATGATTAGCCTCTGAGAACTGTCTCTGCAGCTACATGCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648181.1
ENST00000648891.1
CDS-3UTR TCA 90 bp ATGTTGCCCAGGCTGGTCTTAAACTACTGGACTCAAGTGATCTGCCTGTCTTGGGCACTGCTTAATGAATaGAGATCCAAAGATGGGTCT +
Preference number: 4 (lower is better)
Translates to: MLPRLVLNYWTQVICLSWALLNE*RSKDGS
Trigger: AGACCCATCTTTGGATCTTCATTCATTAAGCAGTGC...CCAAGACAGGCAGATCACTTGAGTCCAGTAGTTTAAGACCAGCCTGGGCAACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000645184.1
ENST00000648181.1
CDS-3UTR TCA 90 bp CAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTCCTATAATTGCACTGGGTAATCTGGATCTTCTCTaGGTTCTTCCTGAGCAGGCT +
Preference number: 4 (lower is better)
Translates to: QRLIIYWWLQIAPIIALGNLDLL*VLPEQA
Trigger: AGCCTGCTCAGGAAGAACTCAGAGAAGATCCAGATT...ACCCAGTGCAATTATAGGAGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648891.1
CDS-3UTR TCA 90 bp AAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAATACATACTAATCTGGATCTTCTCTaGGTTCTTCCTGAGCAGGCT +
Preference number: 4 (lower is better)
Translates to: KAGFGQSIATPLYPTIHTNLDLL*VLPEQA
Trigger: AGCCTGCTCAGGAAGAACTCAGAGAAGATCCAGATT...AGTATGTATTGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp TTCACAATTGGTCATGTGGACAAAGTACTCACTCCTTCTCCTGTGGGGATTTGCAATCTGGATCTTCTCTaGGTTCTTCCTGAGCAGGCT +
Preference number: 4 (lower is better)
Translates to: FTIGHVDKVLTPSPVGICNLDLL*VLPEQA
Trigger: AGCCTGCTCAGGAAGAACTCAGAGAAGATCCAGATT...GCAAATCCCCACAGGAGAAGGAGTGAGTACTTTGTCCACATGACCAATTGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642643.1
ENST00000648891.1
CDS-3UTR TCA 90 bp CCAACACAGCTGACAAGAGTCCTTGGAGGATTTCCCGAAGAATTCCATGGACCCCTTCTTCCAAAAGATTaGGATGCTCACATACTCGTT +
Preference number: 4 (lower is better)
Translates to: PTQLTRVLGGFPEEFHGPLLPKD*DAHILV
Trigger: AACGAGTATGTGAGCATCTCAATCTTTTGGAAGAAG...GGGTCCATGGAATTCTTCGGGAAATCCTCCAAGGACTCTTGTCAGCTGTGTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp CAATTGGTCATGTGGACAAAGTACTCACTCCTTCTCCTGTGGGGATTTGCCCATTCAAGTTCCTTGGTCTaGTTCGGGGCCAGTTTAAAA +
Preference number: 4 (lower is better)
Translates to: QLVMWTKYSLLLLWGFAHSSSLV*FGASLK
Trigger: TTTTAAACTGGCCCCGAATCAGACCAAGGAACTTGA...ATGGGCAAATCCCCACAGGAGAAGGAGTGAGTACTTTGTCCACATGACCAATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642643.1
ENST00000648891.1
CDS-3UTR TCA 90 bp GGGCTCTTTCCCTCCCTCCTGTTGTTCATGTCTCACATGGGTACCAAAAGAAAATCAAGTTCCTTGGTCTaGTTCGGGGCCAGTTTAAAA +
Preference number: 4 (lower is better)
Translates to: GLFPSLLLFMSHMGTKRKSSSLV*FGASLK
Trigger: TTTTAAACTGGCCCCGAATCAGACCAAGGAACTTGA...TTTTCTTTTGGTACCCATGTGAGACATGAACAACAGGAGGGAGGGAAAGAGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp ATGTTGCCCAGGCTGGTCTTAAACTACTGGACTCAAGTGATCTGCCTGTCTTGGACTTATGCAGTTCCATaGCCTTCTCTTCAAGTTCCT +
Preference number: 4 (lower is better)
Translates to: MLPRLVLNYWTQVICLSWTYAVP*PSLQVP
Trigger: AGGAACTTGAAGAGAAGGTCATGGAACTGCATAAGT...CCAAGACAGGCAGATCACTTGAGTCCAGTAGTTTAAGACCAGCCTGGGCAACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000645184.1
ENST00000648181.1
CDS-3UTR TCA 90 bp CTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGAACTCCAAGTCAGCCTaGGCTGGAGTCATGGACCTG +
Preference number: 4 (lower is better)
Translates to: LESLKSDYGRLASLSFCWNSKSA*AGVMDL
Trigger: CAGGTCCATGACTCCAGCTCAGGCTGACTTGGAGTT...CCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp TTGGATCCTAGCGCAAGAAATTTGCTTTTGGGAATGGTGTCTGTAGATGTCAATAACTCCAAGTCAGCCTaGGCTGGAGTCATGGACCTG +
Preference number: 4 (lower is better)
Translates to: LDPSARNLLLGMVSVDVNNSKSA*AGVMDL
Trigger: CAGGTCCATGACTCCAGCTCAGGCTGACTTGGAGTT...ATTGACATCTACAGACACCATTCCCAAAAGCAAATTTCTTGCGCTAGGATCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
CDS-3UTR TCA 90 bp GGGCTCTTTCCCTCCCTCCTGTTGTTCATGTCTCACATGGGTACCAAAAGAAAAAGCAGACACCTAGGATaGTATCTACTCCTTCCAAGT +
Preference number: 4 (lower is better)
Translates to: GLFPSLLLFMSHMGTKRKSRHLG*YLLLPS
Trigger: ACTTGGAAGGAGTAGATATCATCCTAGGTGTCTGCT...TTTTCTTTTGGTACCCATGTGAGACATGAACAACAGGAGGGAGGGAAAGAGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp AGGCCGTGGTTCTGGTACAGACTCCATGAAGTTCTTTTTCAGCTCACTGATGCTAGCAGACACCTAGGATaGTATCTACTCCTTCCAAGT +
Preference number: 4 (lower is better)
Translates to: RPWFWYRLHEVLFQLTDASRHLG*YLLLPS
Trigger: ACTTGGAAGGAGTAGATATCATCCTAGGTGTCTGCT...AGCATCAGTGAGCTGAAAAAGAACTTCATGGAGTCTGTACCAGAACCACGGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
CDS-3UTR TCA 90 bp GAAGCATGTAGCTGCAGAGACAGTTCTCAGAGGCTAATCATCTACTGGTGGCTCGGTAACTGGGAAGTTTaGATCCGATGGTACTTTCAT +
Preference number: 4 (lower is better)
Translates to: EACSCRDSSQRLIIYWWLGNWEV*IRWYFH
Trigger: ATGAAAGTACCATCGGATTCAAACTTCCCAGTTACC...GAGCCACCAGTAGATGATTAGCCTCTGAGAACTGTCTCTGCAGCTACATGCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648181.1
ENST00000648891.1
CDS-3UTR TCA 90 bp CAATGCAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAGGTAACTGGGAAGTTTaGATCCGATGGTACTTTCAT +
Preference number: 4 (lower is better)
Translates to: QCRKAGFGQSIATPLYPTGNWEV*IRWYFH
Trigger: ATGAAAGTACCATCGGATTCAAACTTCCCAGTTACC...TGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTGCATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp AGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAGAAGTTCAATGGTGTTTGGTCACCATTTaGGGTGGGTACTGTCACCTC +
Preference number: 4 (lower is better)
Translates to: RGHHTAITQLKPRTEVQWCLVTI*GGYCHL
Trigger: GAGGTGACAGTACCCACCTCAAATGGTGACCAAACA...CCATTGAACTTCTGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp GGCAGGAAAAAGTTGTCTGTCCCTGTACAGCTCAGAAATACTCATAAAAAGGCCTGTTTGGTCACCATTTaGGGTGGGTACTGTCACCTC +
Preference number: 4 (lower is better)
Translates to: GRKKLSVPVQLRNTHKKACLVTI*GGYCHL
Trigger: GAGGTGACAGTACCCACCTCAAATGGTGACCAAACA...GGCCTTTTTATGAGTATTTCTGAGCTGTACAGGGACAGACAACTTTTTCCTGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp AGCTGCAGAGACAGTTCTCAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTCTGGTACAGACTCCATaGAGTTCTTTTTCAGCTCAC +
Preference number: 4 (lower is better)
Translates to: SCRDSSQRLIIYWWLQIALVQTP*SSFSAH
Trigger: GTGAGCTGAAAAAGAACTTCATGGAGTCTGTACCAG...AGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTGAGAACTGTCTCTGCAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648181.1
ENST00000648891.1
CDS-3UTR TCA 90 bp GGCAGGAAAAAGTTGTCTGTCCCTGTACAGCTCAGAAATACTCATAAAAAGGCCGTTCGGAAGGGTGAGTaGGTGGATAAGCGTTTATCC +
Preference number: 4 (lower is better)
Translates to: GRKKLSVPVQLRNTHKKAVRKGE*VDKRLS
Trigger: GGATAAACGCTTATCCACTCACTCACCCTTCCGAAC...GGCCTTTTTATGAGTATTTCTGAGCTGTACAGGGACAGACAACTTTTTCCTGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp AGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAGAAGTTCAATGGGTTCGGAAGGGTGAGTaGGTGGATAAGCGTTTATCC +
Preference number: 4 (lower is better)
Translates to: RGHHTAITQLKPRTEVQWVRKGE*VDKRLS
Trigger: GGATAAACGCTTATCCACTCACTCACCCTTCCGAAC...CCATTGAACTTCTGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp GGGCTCTTTCCCTCCCTCCTGTTGTTCATGTCTCACATGGGTACCAAAAGAAAAACAGTCTTGGTAATTTaGGTTGTGGTGGTGCTGCTT +
Preference number: 4 (lower is better)
Translates to: GLFPSLLLFMSHMGTKRKTVLVI*VVVVLL
Trigger: AAGCAGCACCACCACAACTCAAATTACCAAGACTGT...TTTTCTTTTGGTACCCATGTGAGACATGAACAACAGGAGGGAGGGAAAGAGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp TCCATTAGAGCTTTTGGCCCAAAGTGCCTATTTTTCTGTGAGATTTGGTCTCCTGCTCCTTTGCCTCCTTaGTGGCTTGTACAAGGACCT +
Preference number: 4 (lower is better)
Translates to: SIRAFGPKCLFFCEIWSPAPLPP*WLVQGP
Trigger: AGGTCCTTGTACAAGCCATCAAGGAGGCAAAGGAGC...AGGAGACCAAATCTCACAGAAAAATAGGCACTTTGGGCCAAAAGCTCTAATGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp CAGATATCTGAAGCAACTTCCATGTCTTTGACCCAAAGAAGCTCCAAAAAGAAAGCAGAGAGGCTAGGCTaGAGGGGTTACAAACCACCC +
Preference number: 4 (lower is better)
Translates to: QISEATSMSLTQRSSKKKAERLG*RGYKPP
Trigger: GGGTGGTTTGTAACCCCTTCAGCCTAGCCTCTCTGC...TTTCTTTTTGGAGCTTCTTTGGGTCAAAGACATGGAAGTTGCTTCAGATATCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp CTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGCCCTCCCTGGCATTCTaGTACACTCACATCACTGGC +
Preference number: 4 (lower is better)
Translates to: LESLKSDYGRLASLSFCWPSLAF*YTHITG
Trigger: GCCAGTGATGTGAGTGTATCAGAATGCCAGGGAGGG...CCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp TCCAAAGGGGATAAGACTAGGGAGAGACGCGGAAGTCCCACTAAGCTGGCTTTGACAGTATCAGATATCTaGAGCAACTTCCATGTCTTT +
Preference number: 4 (lower is better)
Translates to: SKGDKTRERRGSPTKLALTVSDI*SNFHVF
Trigger: AAAGACATGGAAGTTGCTTCAGATATCTGATACTGT...CAAAGCCAGCTTAGTGGGACTTCCGCGTCTCTCCCTAGTCTTATCCCCTTTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp CAGATATCTGAAGCAACTTCCATGTCTTTGACCCAAAGAAGCTCCAAAAAGAAAACAGACCTCAGCTGGTaGGTGGGAATGAGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: QISEATSMSLTQRSSKKKTDLSW*VGMSRA
Trigger: AGCCCTGCTCATTCCCACTCACCAGCTGAGGTCTGT...TTTCTTTTTGGAGCTTCTTTGGGTCAAAGACATGGAAGTTGCTTCAGATATCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp GAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGTTTACAGACCTCAGCTGGTaGGTGGGAATGAGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: ESLKSDYGRLASLSFCWFTDLSW*VGMSRA
Trigger: AGCCCTGCTCATTCCCACTCACCAGCTGAGGTCTGT...AAACCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp TCCATTAGAGCTTTTGGCCCAAAGTGCCTATTTTTCTGTGAGATTTGGTCTCCTCAAGCCTTCAAAACCTaGCAGACCTCAGCTGGTGAG +
Preference number: 4 (lower is better)
Translates to: SIRAFGPKCLFFCEIWSPQAFKT*QTSAGE
Trigger: CTCACCAGCTGAGGTCTGTCAGGTTTTGAAGGCTTG...AGGAGACCAAATCTCACAGAAAAATAGGCACTTTGGGCCAAAAGCTCTAATGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp AAAAATGCACACACCCGAAATGAGTTCAAACCAGCCGAAACAAAACTCAGGCAGTGCACACACCCGAAATaGGTTCAAACCAGCCGAAAC +
Preference number: 4 (lower is better)
Translates to: KNAHTRNEFKPAETKLRQCTHPK*VQTSRN
Trigger: GTTTCGGCTGGTTTGAACTCATTTCGGGTGTGTGCA...CTGCCTGAGTTTTGTTTCGGCTGGTTTGAACTCATTTCGGGTGTGTGCATTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp CTCTTTCCCTCCCTCCTGTTGTTCATGTCTCACATGGGTACCAAAAGAAAAATGTGCACACACCCGAAATaGGTTCAAACCAGCCGAAAC +
Preference number: 4 (lower is better)
Translates to: LFPSLLLFMSHMGTKRKMCTHPK*VQTSRN
Trigger: GTTTCGGCTGGTTTGAACTCATTTCGGGTGTGTGCA...CATTTTTCTTTTGGTACCCATGTGAGACATGAACAACAGGAGGGAGGGAAAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp CAGATATCTGAAGCAACTTCCATGTCTTTGACCCAAAGAAGCTCCAAAAAGAAACGTTTAGGCCCCCGATaGACGGTCCTGTGCTGTGAA +
Preference number: 4 (lower is better)
Translates to: QISEATSMSLTQRSSKKKRLGPR*TVLCCE
Trigger: TTCACAGCACAGGACCGTTCATCGGGGGCCTAAACG...TTTCTTTTTGGAGCTTCTTTGGGTCAAAGACATGGAAGTTGCTTCAGATATCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR TCA 90 bp TTAAACTTCAATGCAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTGCATGTGAGTTGTCCTaGAGAGAGAGAGAGTGCCCA +
Preference number: 4 (lower is better)
Translates to: LNFNAEKLALGSPLLLLCACELS*RERECP
Trigger: TGGGCACTCTCTCTCTCTTCAGGACAACTCACATGC...ACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTGCATTGAAGTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp CAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAATACATTGCACACCCCTAAGTaGTATGTATCAGGGAGAAAG +
Preference number: 4 (lower is better)
Translates to: QKSWLWAVHCYSFVPHNTLHTPK*YVSGRK
Trigger: CTTTCTCCCTGATACATATCACTTAGGGGTGTGCAA...TGTATTGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR TCA 90 bp AATTGTCCAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCAGGCAGAGGTTGCAGTaGGCTGAGATCGCGCCACTG +
Preference number: 4 (lower is better)
Translates to: NCPIEKFLFPLQFLYSAIRQRLQ*AEIAPL
Trigger: CAGTGGCGCGATCTCAGCTCACTGCAACCTCTGCCT...GATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTGGACAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR TCA 90 bp ATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAGTCAAGGCCGGAGAATTGCTTaGACCCGGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: IEKFLFPLQFLYSAIHSQGRRIA*TREAEV
Trigger: AACCTCTGCCTCCCGGGTTCAAGCAATTCTCCGGCC...TTGACTATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR GCA 90 bp GGCTCAGCTTGCTCAGGTGGCTCGTCTTCCTTTTTCACTTCAGCCTTCACTGTTATTATCTCCTTCAGCTaGTGTTTGACAAGATTCCTC +
Preference number: 4 (lower is better)
Translates to: GSACSGGSSSFFTSAFTVIISFS*CLTRFL
Trigger: GAGGAATCTTGTCAAACAGCAGCTGAAGGAGATAAT...AACAGTGAAGGCTGAAGTGAAAAAGGAAGACGAGCCACCTGAGCAAGCTGAGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000643155.1
ENST00000648891.1
CDS-3UTR GCA 90 bp GTTGGGAGAAGCAGCTTTAGACATTTCTCTTGCTCACTGCCCTTGAGCCCCAGTATTATCTCCTTCAGCTaGTGTTTGACAAGATTCCTC +
Preference number: 4 (lower is better)
Translates to: VGRSSFRHFSCSLPLSPSIISFS*CLTRFL
Trigger: GAGGAATCTTGTCAAACAGCAGCTGAAGGAGATAAT...ACTGGGGCTCAAGGGCAGTGAGCAAGAGAAATGTCTAAAGCTGCTTCTCCCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp CTCTTTCCCTCCCTCCTGTTGTTCATGTCTCACATGGGTACCAAAAGAAAAATGGTCGTGAAAGTCCTCTaGTTTCTGATGTCCGCTCCT +
Preference number: 4 (lower is better)
Translates to: LFPSLLLFMSHMGTKRKMVVKVL*FLMSAP
Trigger: AGGAGCGGACATCAGAAAGCAGAGGACTTTCACGAC...CATTTTTCTTTTGGTACCCATGTGAGACATGAACAACAGGAGGGAGGGAAAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp TTCACAATTGGTCATGTGGACAAAGTACTCACTCCTTCTCCTGTGGGGATTTGCCTGACTCTACTTCTTTaGCTTCTTCCTCGGACACCT +
Preference number: 4 (lower is better)
Translates to: FTIGHVDKVLTPSPVGICLTLLL*LLPRTP
Trigger: AGGTGTCCGAGGAAGAAGGCAAAGAAGTAGAGTCAG...GCAAATCCCCACAGGAGAAGGAGTGAGTACTTTGTCCACATGACCAATTGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642643.1
ENST00000648891.1
CDS-3UTR GCA 90 bp GCCACATTCCTTGTCATTTGGGATGAAAGAAAGGCCCAGGATCAGACAGAAGTACTGACTCTACTTCTTTaGCTTCTTCCTCGGACACCT +
Preference number: 4 (lower is better)
Translates to: ATFLVIWDERKAQDQTEVLTLLL*LLPRTP
Trigger: AGGTGTCCGAGGAAGAAGGCAAAGAAGTAGAGTCAG...TACTTCTGTCTGATCCTGGGCCTTTCTTTCATCCCAAATGACAAGGAATGTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp TCAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTCCTATAATTGCACTGGGCTGACTCTACTTCTTTaGCTTCTTCCTCGGACACCT +
Preference number: 4 (lower is better)
Translates to: SEANHLLVAPNSSYNCTGLTLLL*LLPRTP
Trigger: AGGTGTCCGAGGAAGAAGGCAAAGAAGTAGAGTCAG...CCCAGTGCAATTATAGGAGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648181.1
ENST00000648891.1
CDS-3UTR GCA 90 bp CCAACACAGCTGACAAGAGTCCTTGGAGGATTTCCCGAAGAATTCCATGGACCCGCTGTGTTTCTGCACTaGTTAATGAATGAAGATCCA +
Preference number: 4 (lower is better)
Translates to: PTQLTRVLGGFPEEFHGPAVFLH*LMNEDP
Trigger: TGGATCTTCATTCATTAAGCAGTGCAGAAACACAGC...GGGTCCATGGAATTCTTCGGGAAATCCTCCAAGGACTCTTGTCAGCTGTGTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp CCCTTGTCATGTGGTGTCTTGTGGGGAGAACGGCTCCTAAAAGTCAATTCCTTGCCAACAAAGAAACCTTaGAGTGCATGTTCCTGTGTT +
Preference number: 4 (lower is better)
Translates to: PLSCGVLWGERLLKVNSLPTKKP*SACSCV
Trigger: AACACAGGAACATGCACTGCAAGGTTTCTTTGTTGG...CAAGGAATTGACTTTTAGGAGCCGTTCTCCCCACAAGACACCACATGACAAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp GAAGCATGTAGCTGCAGAGACAGTTCTCAGAGGCTAATCATCTACTGGTGGCTCCCAACAAAGAAACCTTaGAGTGCATGTTCCTGTGTT +
Preference number: 4 (lower is better)
Translates to: EACSCRDSSQRLIIYWWLPTKKP*SACSCV
Trigger: AACACAGGAACATGCACTGCAAGGTTTCTTTGTTGG...GAGCCACCAGTAGATGATTAGCCTCTGAGAACTGTCTCTGCAGCTACATGCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648891.1
CDS-3UTR GCA 90 bp CTTCATCCAATACAAGGGCTTGGCCATTCTCCTCTTAATCATTCTTACCCTATTACAGGGCAGACGTCCTaGAACTATGTCCTGCCGAAG +
Preference number: 4 (lower is better)
Translates to: LHPIQGLGHSPLNHSYPITGQTS*NYVLPK
Trigger: CTTCGGCAGGACATAGTTGCAGGACGTCTGCCCTGT...AATAGGGTAAGAATGATTAAGAGGAGAATGGCCAAGCCCTTGTATTGGATGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636666.1
ENST00000644342.1
ENST00000646800.1
CDS-3UTR GCA 90 bp CTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGACAGGGCAGACGTCCTaGAACTATGTCCTGCCGAAG +
Preference number: 4 (lower is better)
Translates to: LESLKSDYGRLASLSFCWTGQTS*NYVLPK
Trigger: CTTCGGCAGGACATAGTTGCAGGACGTCTGCCCTGT...CCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp CCCTTGTCATGTGGTGTCTTGTGGGGAGAACGGCTCCTAAAAGTCAATTCCTTGGACCTGTATGACTTATaGAGTTCCATGACCTTCTCT +
Preference number: 4 (lower is better)
Translates to: PLSCGVLWGERLLKVNSLDLYDL*SSMTFS
Trigger: AGAGAAGGTCATGGAACTGCATAAGTCATACAGGTC...CAAGGAATTGACTTTTAGGAGCCGTTCTCCCCACAAGACACCACATGACAAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp GAAGCATGTAGCTGCAGAGACAGTTCTCAGAGGCTAATCATCTACTGGTGGCTCGACCTGTATGACTTATaGAGTTCCATGACCTTCTCT +
Preference number: 4 (lower is better)
Translates to: EACSCRDSSQRLIIYWWLDLYDL*SSMTFS
Trigger: AGAGAAGGTCATGGAACTGCATAAGTCATACAGGTC...GAGCCACCAGTAGATGATTAGCCTCTGAGAACTGTCTCTGCAGCTACATGCTTC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648181.1
ENST00000648891.1
CDS-3UTR GCA 90 bp CCAACACAGCTGACAAGAGTCCTTGGAGGATTTCCCGAAGAATTCCATGGACCCTCCTTCCAAGTCCTTTaGTTTATGAAGATCAACTCC +
Preference number: 4 (lower is better)
Translates to: PTQLTRVLGGFPEEFHGPSFQVL*FMKINS
Trigger: GGAGTTGATCTTCATAAAGCAAAGGACTTGGAAGGA...GGGTCCATGGAATTCTTCGGGAAATCCTCCAAGGACTCTTGTCAGCTGTGTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp TCAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTCCTATAATTGCACTGGGATGGTACTTTCATACTaGTCTTGCTCTCCAGGCCGA +
Preference number: 4 (lower is better)
Translates to: SEANHLLVAPNSSYNCTGMVLSY*SCSPGR
Trigger: TCGGCCTGGAGAGCAAGAGCAGTATGAAAGTACCAT...CCCAGTGCAATTATAGGAGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648181.1
CDS-3UTR GCA 90 bp GCCACATTCCTTGTCATTTGGGATGAAAGAAAGGCCCAGGATCAGACAGAAGTAATGGTACTTTCATACTaGTCTTGCTCTCCAGGCCGA +
Preference number: 4 (lower is better)
Translates to: ATFLVIWDERKAQDQTEVMVLSY*SCSPGR
Trigger: TCGGCCTGGAGAGCAAGAGCAGTATGAAAGTACCAT...TACTTCTGTCTGATCCTGGGCCTTTCTTTCATCCCAAATGACAAGGAATGTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp CAGAGACAGTTCTCAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTCCTATATGGTACTTTCATACTaGTCTTGCTCTCCAGGCCGA +
Preference number: 4 (lower is better)
Translates to: QRQFSEANHLLVAPNSSYMVLSY*SCSPGR
Trigger: TCGGCCTGGAGAGCAAGAGCAGTATGAAAGTACCAT...ATAGGAGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTGAGAACTGTCTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648181.1
CDS-3UTR GCA 90 bp GAAGCATGTAGCTGCAGAGACAGTTCTCAGAGGCTAATCATCTACTGGTGGCTCCTAGCGCAAGAAATTTaGTTTTGGGAATGGTGTCTG +
Preference number: 4 (lower is better)
Translates to: EACSCRDSSQRLIIYWWLLAQEI*FWEWCL
Trigger: CAGACACCATTCCCAAAAGCAAATTTCTTGCGCTAG...GAGCCACCAGTAGATGATTAGCCTCTGAGAACTGTCTCTGCAGCTACATGCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648181.1
ENST00000648891.1
CDS-3UTR GCA 90 bp ATGTTGCCCAGGCTGGTCTTAAACTACTGGACTCAAGTGATCTGCCTGTCTTGGCTAGCGCAAGAAATTTaGTTTTGGGAATGGTGTCTG +
Preference number: 4 (lower is better)
Translates to: MLPRLVLNYWTQVICLSWLAQEI*FWEWCL
Trigger: CAGACACCATTCCCAAAAGCAAATTTCTTGCGCTAG...CCAAGACAGGCAGATCACTTGAGTCCAGTAGTTTAAGACCAGCCTGGGCAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000645184.1
ENST00000648181.1
CDS-3UTR GCA 90 bp CCCTTGTCATGTGGTGTCTTGTGGGGAGAACGGCTCCTAAAAGTCAATTCCTTGCTAGCGCAAGAAATTTaGTTTTGGGAATGGTGTCTG +
Preference number: 4 (lower is better)
Translates to: PLSCGVLWGERLLKVNSLLAQEI*FWEWCL
Trigger: CAGACACCATTCCCAAAAGCAAATTTCTTGCGCTAG...CAAGGAATTGACTTTTAGGAGCCGTTCTCCCCACAAGACACCACATGACAAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp CTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGGGACGCCCGTTTACTTaGTGTACGCTCGAAGTGTGG +
Preference number: 4 (lower is better)
Translates to: LESLKSDYGRLASLSFCWGRPFT*CTLEVW
Trigger: CCACACTTCGAGCGTACAGCAAGTAAACGGGCGTCC...CCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp ATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAGTCAACCGAGGACTTCGGTCTaGCGAATCGACAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: IEKFLFPLQFLYSAIHSQPRTSV*RIDSCC
Trigger: GCAGCAGCTGTCGATTCGGCAGACCGAAGTCCTCGG...TTGACTATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR GCA 90 bp AATCTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCGGCTCTGGCTCAGCTTaGTCAGGTGGCTCGTCTTCC +
Preference number: 4 (lower is better)
Translates to: NLESLKSDYGRLASLSFCGSGSA*SGGSSS
Trigger: GGAAGACGAGCCACCTGAGCAAGCTGAGCCAGAGCC...GCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp AATTGTCCAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCGGCTCTGGCTCAGCTTaGTCAGGTGGCTCGTCTTCC +
Preference number: 4 (lower is better)
Translates to: NCPIEKFLFPLQFLYSAIGSGSA*SGGSSS
Trigger: GGAAGACGAGCCACCTGAGCAAGCTGAGCCAGAGCC...GATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTGGACAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644470.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR GCA 90 bp TCTATACACCAGGCAGGAAAAAGTTGTCTGTCCCTGTACAGCTCAGAAATACTCTTTTTCCACCTTCCATaGTTCTGTGGGCTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: SIHQAGKSCLSLYSSEILFFHLP*FCGLWL
Trigger: GAGCCAGAGCCCACAGAAGCATGGAAGGTGGAAAAA...GAGTATTTCTGAGCTGTACAGGGACAGACAACTTTTTCCTGCCTGGTGTATAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR GCA 90 bp GAAGCATGTAGCTGCAGAGACAGTTCTCAGAGGCTAATCATCTACTGGTGGCTCTCTCCTGTGGGGATTTaGCCATTGATGTTAAGAGTT +
Preference number: 4 (lower is better)
Translates to: EACSCRDSSQRLIIYWWLSPVGI*PLMLRV
Trigger: AACTCTTAACATCAATGGGCAAATCCCCACAGGAGA...GAGCCACCAGTAGATGATTAGCCTCTGAGAACTGTCTCTGCAGCTACATGCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648181.1
ENST00000648891.1
CDS-3UTR GCA 90 bp CTCTTTCCCTCCCTCCTGTTGTTCATGTCTCACATGGGTACCAAAAGAAAAATGTTTGAGTTGTGGTGGTaGTGCTTGGGGTCTCAGATG +
Preference number: 4 (lower is better)
Translates to: LFPSLLLFMSHMGTKRKMFELWW*CLGSQM
Trigger: CATCTGAGACCCCAAGCAGCACCACCACAACTCAAA...CATTTTTCTTTTGGTACCCATGTGAGACATGAACAACAGGAGGGAGGGAAAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp AAAAATGCACACACCCGAAATGAGTTCAAACCAGCCGAAACAAAACTCAGGCAGTTTGAGTTGTGGTGGTaGTGCTTGGGGTCTCAGATG +
Preference number: 4 (lower is better)
Translates to: KNAHTRNEFKPAETKLRQFELWW*CLGSQM
Trigger: CATCTGAGACCCCAAGCAGCACCACCACAACTCAAA...CTGCCTGAGTTTTGTTTCGGCTGGTTTGAACTCATTTCGGGTGTGTGCATTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp TCCATTAGAGCTTTTGGCCCAAAGTGCCTATTTTTCTGTGAGATTTGGTCTCCTGACATGTCTGGGTGCTaGTCCTTTGCCTCCTTGATG +
Preference number: 4 (lower is better)
Translates to: SIRAFGPKCLFFCEIWSPDMSGC*SFASLM
Trigger: CATCAAGGAGGCAAAGGAGCAGCACCCAGACATGTC...AGGAGACCAAATCTCACAGAAAAATAGGCACTTTGGGCCAAAAGCTCTAATGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp GAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGTTTCTCAGCAGAGGGCTCTaGCTTACCAAAACCACCCGC +
Preference number: 4 (lower is better)
Translates to: ESLKSDYGRLASLSFCWFLSRGL*LTKTTR
Trigger: GCGGGTGGTTTTGGTAAGGCAGAGCCCTCTGCTGAG...AAACCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp CAGCTGACAAGAGTCCTTGGAGGATTTCCCGAAGAATTCCATGGACCCTGTCAGGCTTTTGGCCCAAAGTaGCTATTTTTCTGTGAGATT +
Preference number: 4 (lower is better)
Translates to: QLTRVLGGFPEEFHGPCQAFGPK*LFFCEI
Trigger: AATCTCACAGAAAAATAGGCACTTTGGGCCAAAAGC...CTGACAGGGTCCATGGAATTCTTCGGGAAATCCTCCAAGGACTCTTGTCAGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp CTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGCTGAGGCAAGAGAACTaGTTGAACCCAGGAGGCGGA +
Preference number: 4 (lower is better)
Translates to: LESLKSDYGRLASLSFCWLRQEN*LNPGGG
Trigger: TCCGCCTCCTGGGTTCAAGCAGTTCTCTTGCCTCAG...CCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp CTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGAGCCCCAGTGACTGCTaGCCGATACCCACTGTCTAT +
Preference number: 4 (lower is better)
Translates to: LESLKSDYGRLASLSFCWSPSDC*PIPTVY
Trigger: ATAGACAGTGGGTATCGGGCAGCAGTCACTGGGGCT...CCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp GGGCTCTTTCCCTCCCTCCTGTTGTTCATGTCTCACATGGGTACCAAAAGAAAAACCTTTCAGACCCTCTaGCCACAGCCTATAATTTTG +
Preference number: 4 (lower is better)
Translates to: GLFPSLLLFMSHMGTKRKTFQTL*PQPIIL
Trigger: CAAAATTATAGGCTGTGGGCAGAGGGTCTGAAAGGT...TTTTCTTTTGGTACCCATGTGAGACATGAACAACAGGAGGGAGGGAAAGAGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp GGCAGGAAAAAGTTGTCTGTCCCTGTACAGCTCAGAAATACTCATAAAAAGGCCCTTTGGGCAGTCCATTaGTACTCCTTTGTACCCCAC +
Preference number: 4 (lower is better)
Translates to: GRKKLSVPVQLRNTHKKALWAVH*YSFVPH
Trigger: GTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAG...GGCCTTTTTATGAGTATTTCTGAGCTGTACAGGGACAGACAACTTTTTCCTGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR GCA 90 bp GACATTAACCAAATCATCCATATTGGTACATTCAAGTGCCATAAAAAGCAAGCTCTGAGATCGCGCCACTaGACTCCAGCCTGGGGGACA +
Preference number: 4 (lower is better)
Translates to: DINQIIHIGTFKCHKKQALRSRH*TPAWGT
Trigger: TGTCCCCCAGGCTGGAGTGCAGTGGCGCGATCTCAG...AGCTTGCTTTTTATGGCACTTGAATGTACCAATATGGATGATTTGGTTAATGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR GCA 90 bp AGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAGTCAAGACACTGAGGCCGGAGAATTaGTTGAACCCGGGAGGCAGA +
Preference number: 4 (lower is better)
Translates to: RSFYSPCNFCTLLSIVKTLRPEN*LNPGGR
Trigger: TCTGCCTCCCGGGTTCAAGCAATTCTCCGGCCTCAG...TGTCTTGACTATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR GCA 90 bp GGACACATACTTGTCACAAGTGAACTTGAGGTCACAAAGCCATTGATTAAAAACCTGAGGCCGGAGAATTaGTTGAACCCGGGAGGCAGA +
Preference number: 4 (lower is better)
Translates to: GHILVTSELEVTKPLIKNLRPEN*LNPGGR
Trigger: TCTGCCTCCCGGGTTCAAGCAATTCTCCGGCCTCAG...GTTTTTAATCAATGGCTTTGTGACCTCAAGTTCACTTGTGACAAGTATGTGTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR GCA 90 bp GTCCAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATACTGAGGCCGGAGAATTaGTTGAACCCGGGAGGCAGA +
Preference number: 4 (lower is better)
Translates to: VQLRSFYSPCNFCTLLSILRPEN*LNPGGR
Trigger: TCTGCCTCCCGGGTTCAAGCAATTCTCCGGCCTCAG...TATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR CCA 90 bp ATGTTGCCCAGGCTGGTCTTAAACTACTGGACTCAAGTGATCTGCCTGTCTTGGATGAAGATCCAAAGATaGGTCTGTTTTGAGTTCCGG +
Preference number: 4 (lower is better)
Translates to: MLPRLVLNYWTQVICLSWMKIQR*VCFEFR
Trigger: CCGGAACTCAAAACAGACCCATCTTTGGATCTTCAT...CCAAGACAGGCAGATCACTTGAGTCCAGTAGTTTAAGACCAGCCTGGGCAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000645184.1
ENST00000648181.1
CDS-3UTR CCA 90 bp TTTGAGCTGTCAGCAAGACTCCTGGGTCCAAGTCTCCACTGTTGTCGTCAGTCTCCAGTTCAGACTGGATaGTGTAAGAACCTAATAATG +
Preference number: 4 (lower is better)
Translates to: FELSARLLGPSLHCCRQSPVQTG*CKNLIM
Trigger: CATTATTAGGTTCTTACACCATCCAGTCTGAACTGG...AGACTGACGACAACAGTGGAGACTTGGACCCAGGAGTCTTGCTGACAGCTCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643155.1
CDS-3UTR CCA 90 bp CTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGCACGCCATGGAGTTCTaGGTCGTAGTCTCCCAGTTC +
Preference number: 4 (lower is better)
Translates to: LESLKSDYGRLASLSFCWHAMEF*VVVSQF
Trigger: GAACTGGGAGACTACGACCCAGAACTCCATGGCGTG...CCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp CAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTCCTATAATTGCACTGGGTCCTGAGCTGGAGTCATaGACCTGTATGACTTATGCA +
Preference number: 4 (lower is better)
Translates to: QRLIIYWWLQIAPIIALGPELES*TCMTYA
Trigger: TGCATAAGTCATACAGGTCCATGACTCCAGCTCAGG...ACCCAGTGCAATTATAGGAGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648181.1
ENST00000648891.1
CDS-3UTR CCA 90 bp TCTATACACCAGGCAGGAAAAAGTTGTCTGTCCCTGTACAGCTCAGAAATACTCCTCAGCTTGCTCAGGTaGCTCGTCTTCCTTTTTCAC +
Preference number: 4 (lower is better)
Translates to: SIHQAGKSCLSLYSSEILLSLLR*LVFLFH
Trigger: GTGAAAAAGGAAGACGAGCCACCTGAGCAAGCTGAG...GAGTATTTCTGAGCTGTACAGGGACAGACAACTTTTTCCTGCCTGGTGTATAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CCA 90 bp GGCAGGAAAAAGTTGTCTGTCCCTGTACAGCTCAGAAATACTCATAAAAAGGCCCTCAGCTTGCTCAGGTaGCTCGTCTTCCTTTTTCAC +
Preference number: 4 (lower is better)
Translates to: GRKKLSVPVQLRNTHKKALSLLR*LVFLFH
Trigger: GTGAAAAAGGAAGACGAGCCACCTGAGCAAGCTGAG...GGCCTTTTTATGAGTATTTCTGAGCTGTACAGGGACAGACAACTTTTTCCTGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CCA 90 bp AGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAGAAGTTCAATGGCTCAGCTTGCTCAGGTaGCTCGTCTTCCTTTTTCAC +
Preference number: 4 (lower is better)
Translates to: RGHHTAITQLKPRTEVQWLSLLR*LVFLFH
Trigger: GTGAAAAAGGAAGACGAGCCACCTGAGCAAGCTGAG...CCATTGAACTTCTGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CCA 90 bp CTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGCCTTCCATGCTTCTGTaGGCTCTGGCTCAGCTTGCT +
Preference number: 4 (lower is better)
Translates to: LESLKSDYGRLASLSFCWPSMLL*ALAQLA
Trigger: AGCAAGCTGAGCCAGAGCCCACAGAAGCATGGAAGG...CCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
CDS-3UTR CCA 90 bp CAGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAGAAGTTCAATGGGTCACCATTTGAGGTaGGTACTGTCACCTCGATGT +
Preference number: 4 (lower is better)
Translates to: QRASYSNNTVEAKDRSSMGHHLR*VLSPRC
Trigger: ACATCGAGGTGACAGTACCCACCTCAAATGGTGACC...CATTGAACTTCTGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CCA 90 bp AAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAATACATACTACTAGGCCGTGGTTCTaGTACAGACTCCATGAAGTT +
Preference number: 4 (lower is better)
Translates to: KAGFGQSIATPLYPTIHTTRPWF*YRLHEV
Trigger: AACTTCATGGAGTCTGTACCAGAACCACGGCCTAGT...AGTATGTATTGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CCA 90 bp CAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTCCTATAATTGCACTGGGTACTAGGCCGTGGTTCTaGTACAGACTCCATGAAGTT +
Preference number: 4 (lower is better)
Translates to: QRLIIYWWLQIAPIIALGTRPWF*YRLHEV
Trigger: AACTTCATGGAGTCTGTACCAGAACCACGGCCTAGT...ACCCAGTGCAATTATAGGAGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648181.1
ENST00000648891.1
CDS-3UTR CCA 90 bp TTCACAATTGGTCATGTGGACAAAGTACTCACTCCTTCTCCTGTGGGGATTTGCACTAGGCCGTGGTTCTaGTACAGACTCCATGAAGTT +
Preference number: 4 (lower is better)
Translates to: FTIGHVDKVLTPSPVGICTRPWF*YRLHEV
Trigger: AACTTCATGGAGTCTGTACCAGAACCACGGCCTAGT...GCAAATCCCCACAGGAGAAGGAGTGAGTACTTTGTCCACATGACCAATTGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642643.1
ENST00000648891.1
CDS-3UTR CCA 90 bp CAGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAGAAGTTCAATGCCATTCACTAGGCCGTaGTTCTGGTACAGACTCCAT +
Preference number: 4 (lower is better)
Translates to: QRASYSNNTVEAKDRSSMPFTRP*FWYRLH
Trigger: ATGGAGTCTGTACCAGAACCACGGCCTAGTGAATGG...CATTGAACTTCTGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CCA 90 bp CTCCTTTGCCTCCTTGATGGCTTGTACAAGGACCTGATCATGGTCAATATCAGCGGAAGGGTGAGTGAGTaGATAAGCGTTTATCCCATT +
Preference number: 4 (lower is better)
Translates to: LLCLLDGLYKDLIMVNISGRVSE*ISVYPI
Trigger: AATGGGATAAACGCTTATCCACTCACTCACCCTTCC...GCTGATATTGACCATGATCAGGTCCTTGTACAAGCCATCAAGGAGGCAAAGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643155.1
CDS-3UTR CCA 90 bp CAATTGGTCATGTGGACAAAGTACTCACTCCTTCTCCTGTGGGGATTTGCCCATGGAAGGGTGAGTGAGTaGATAAGCGTTTATCCCATT +
Preference number: 4 (lower is better)
Translates to: QLVMWTKYSLLLLWGFAHGRVSE*ISVYPI
Trigger: AATGGGATAAACGCTTATCCACTCACTCACCCTTCC...ATGGGCAAATCCCCACAGGAGAAGGAGTGAGTACTTTGTCCACATGACCAATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642643.1
ENST00000648891.1
CDS-3UTR CCA 90 bp GGGCTCTTTCCCTCCCTCCTGTTGTTCATGTCTCACATGGGTACCAAAAGAAAAAGGGACGTCTTTGGTTaGGATTTCACTTTTCACAGC +
Preference number: 4 (lower is better)
Translates to: GLFPSLLLFMSHMGTKRKRDVFG*DFTFHS
Trigger: GCTGTGAAAAGTGAAATCCCAACCAAAGACGTCCCT...TTTTCTTTTGGTACCCATGTGAGACATGAACAACAGGAGGGAGGGAAAGAGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp CTCTTTCCCTCCCTCCTGTTGTTCATGTCTCACATGGGTACCAAAAGAAAAATGTGTGGTGGTGCTGCTTaGGGTCTCAGATGTGATAGT +
Preference number: 4 (lower is better)
Translates to: LFPSLLLFMSHMGTKRKMCGGAA*GLRCDS
Trigger: ACTATCACATCTGAGACCCCAAGCAGCACCACCACA...CATTTTTCTTTTGGTACCCATGTGAGACATGAACAACAGGAGGGAGGGAAAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp CTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGATCTCGGTCTCCTGGTaGACGACCACCTTGGTCACT +
Preference number: 4 (lower is better)
Translates to: LESLKSDYGRLASLSFCWISVSW*TTTLVT
Trigger: AGTGACCAAGGTGGTCGTCCACCAGGAGACCGAGAT...CCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp GAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGTTTGCAATCTCGGTCTCCTaGTGGACGACCACCTTGGTC +
Preference number: 4 (lower is better)
Translates to: ESLKSDYGRLASLSFCWFAISVS*WTTTLV
Trigger: GACCAAGGTGGTCGTCCACCAGGAGACCGAGATTGC...AAACCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp GAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGTTTTCTTTCCGAGGTCTGTaGATCAGGGCTGGTGCCCTC +
Preference number: 4 (lower is better)
Translates to: ESLKSDYGRLASLSFCWFSFRGL*IRAGAL
Trigger: GAGGGCACCAGCCCTGATCCACAGACCTCGGAAAGA...AAACCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp CAGATATCTGAAGCAACTTCCATGTCTTTGACCCAAAGAAGCTCCAAAAAGAAATCTTTCCGAGGTCTGTaGATCAGGGCTGGTGCCCTC +
Preference number: 4 (lower is better)
Translates to: QISEATSMSLTQRSSKKKSFRGL*IRAGAL
Trigger: GAGGGCACCAGCCCTGATCCACAGACCTCGGAAAGA...TTTCTTTTTGGAGCTTCTTTGGGTCAAAGACATGGAAGTTGCTTCAGATATCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp TCCATTAGAGCTTTTGGCCCAAAGTGCCTATTTTTCTGTGAGATTTGGTCTCCTTTTGGTCTCCTGAGATaGGAGCTAGGGGGAGCACTT +
Preference number: 4 (lower is better)
Translates to: SIRAFGPKCLFFCEIWSPFGLLR*ELGGAL
Trigger: AAGTGCTCCCCCTAGCTCCCATCTCAGGAGACCAAA...AGGAGACCAAATCTCACAGAAAAATAGGCACTTTGGGCCAAAAGCTCTAATGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp CCCTTGTCATGTGGTGTCTTGTGGGGAGAACGGCTCCTAAAAGTCAATTCCTTGACATTCCTTGTCATTTaGGATGAAAGAAAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: PLSCGVLWGERLLKVNSLTFLVI*DERKAQ
Trigger: CTGGGCCTTTCTTTCATCCCAAATGACAAGGAATGT...CAAGGAATTGACTTTTAGGAGCCGTTCTCCCCACAAGACACCACATGACAAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp CTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGGGGAATGAGCAGGGCTaGGGCTTATACCCCTTGTCA +
Preference number: 4 (lower is better)
Translates to: LESLKSDYGRLASLSFCWGNEQG*GLYPLS
Trigger: TGACAAGGGGTATAAGCCCCAGCCCTGCTCATTCCC...CCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp CAGATATCTGAAGCAACTTCCATGTCTTTGACCCAAAGAAGCTCCAAAAAGAAAATTTGCTGGGCGTGGTaGTGTGCGCCTGTCATCCCA +
Preference number: 4 (lower is better)
Translates to: QISEATSMSLTQRSSKKKICWAW*CAPVIP
Trigger: TGGGATGACAGGCGCACACCACCACGCCCAGCAAAT...TTTCTTTTTGGAGCTTCTTTGGGTCAAAGACATGGAAGTTGCTTCAGATATCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp TCCATTAGAGCTTTTGGCCCAAAGTGCCTATTTTTCTGTGAGATTTGGTCTCCTAGGCAGTGGAGACTTTaGACGGTGTTGGGAGAAGCA +
Preference number: 4 (lower is better)
Translates to: SIRAFGPKCLFFCEIWSPRQWRL*TVLGEA
Trigger: TGCTTCTCCCAACACCGTCCAAAGTCTCCACTGCCT...AGGAGACCAAATCTCACAGAAAAATAGGCACTTTGGGCCAAAAGCTCTAATGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp CAGATATCTGAAGCAACTTCCATGTCTTTGACCCAAAGAAGCTCCAAAAAGAAACAACACGACCAGGCTTaGGCACTACCCCAAAGCCCA +
Preference number: 4 (lower is better)
Translates to: QISEATSMSLTQRSSKKKQHDQA*ALPQSP
Trigger: TGGGCTTTGGGGTAGTGCCCAAGCCTGGTCGTGTTG...TTTCTTTTTGGAGCTTCTTTGGGTCAAAGACATGGAAGTTGCTTCAGATATCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp GAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGTTTCAACACGACCAGGCTTaGGCACTACCCCAAAGCCCA +
Preference number: 4 (lower is better)
Translates to: ESLKSDYGRLASLSFCWFQHDQA*ALPQSP
Trigger: TGGGCTTTGGGGTAGTGCCCAAGCCTGGTCGTGTTG...AAACCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp CAATGCAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACATCTTCATTTTCTTGCTaGGGCAAGGCTCTTTCAGTA +
Preference number: 4 (lower is better)
Translates to: QCRKAGFGQSIATPLYPTSSFSC*GKALSV
Trigger: TACTGAAAGAGCCTTGCCCCAGCAAGAAAATGAAGA...TGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTGCATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CCA 90 bp CAGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAGAAGTTCAATGCAGAAAAGCTGGCTTTaGGCAGTCCATTGCTACTCC +
Preference number: 4 (lower is better)
Translates to: QRASYSNNTVEAKDRSSMQKSWL*AVHCYS
Trigger: GGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTG...CATTGAACTTCTGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CCA 90 bp ACTATCAAGATCAGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAGTAGCTAGGGGACTCTaGCCCACCAACCTTTCTTTC +
Preference number: 4 (lower is better)
Translates to: TIKIRGHHTAITQLKPRTVARGL*PTNLSF
Trigger: GAAAGAAAGGTTGGTGGGCCAGAGTCCCCTAGCTAC...TGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCTGATCTTGATAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000643173.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
CDS-3UTR CCA 90 bp CAATGCAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAAGTTCAAGGAATCACTaGCTTTCCCCTTGCTATGTT +
Preference number: 4 (lower is better)
Translates to: QCRKAGFGQSIATPLYPTSSRNH*LSPCYV
Trigger: AACATAGCAAGGGGAAAGCCAGTGATTCCTTGAACT...TGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTGCATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR CCA 90 bp CAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAATACATTTCTCTTCATCCTCTaGCCCACCAACCTTTCTTTC +
Preference number: 4 (lower is better)
Translates to: QKSWLWAVHCYSFVPHNTFLFIL*PTNLSF
Trigger: GAAAGAAAGGTTGGTGGGCCAGAGGATGAAGAGAAA...TGTATTGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644780.1
CDS-3UTR CCA 90 bp GGCTCAGCTTGCTCAGGTGGCTCGTCTTCCTTTTTCACTTCAGCCTTCACTGTTCTAATCATCTACTGGTaGCTCCAAATAGCTCCTATA +
Preference number: 4 (lower is better)
Translates to: GSACSGGSSSFFTSAFTVLIIYW*LQIAPI
Trigger: TATAGGAGCTATTTGGAGCCACCAGTAGATGATTAG...AACAGTGAAGGCTGAAGTGAAAAAGGAAGACGAGCCACCTGAGCAAGCTGAGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642643.1
ENST00000648891.1
CDS-3UTR CCA 90 bp AGCTGCAGAGACAGTTCTCAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTAGGCTAATCATCTACTaGTGGCTCCAAATAGCTCCT +
Preference number: 4 (lower is better)
Translates to: SCRDSSQRLIIYWWLQIARLIIY*WLQIAP
Trigger: AGGAGCTATTTGGAGCCACCAGTAGATGATTAGCCT...AGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTGAGAACTGTCTCTGCAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648181.1
ENST00000648891.1
3UTR CAA 72 bp GAAACAAAACTCAGGCAGTGGAGACTTTGGACGGTGTaGGGAGAAGCAGCTTTAGACATTTCTCTTGCTCAC +
Preference number: 4 (lower is better)
Translates to: ETKLRQWRLWTV*GEAALDISLAH
Trigger: GTGAGCAAGAGAAATGTCTAAAGCTGCTTCTCCCAACACCGTCCAAAGTCTCCACTGCCTGAGTTTTGTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp GGATCAATGAGATCTAGAAGAATCTCTTGGTATAAACTCCCAATAGAAACTGAACTGCTGCTGGCTGACTaGCTAAACGCACCAGCGGAG +
Preference number: 4 (lower is better)
Translates to: GSMRSRRISWYKLPIETELLLAD*LNAPAE
Trigger: CTCCGCTGGTGCGTTTAGTCAGTCAGCCAGCAGCAG...TTCAGTTTCTATTGGGAGTTTATACCAAGAGATTCTTCTAGATCTCATTGATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000343067.9
ENST00000349460.9
CDS-3UTR TCA 90 bp GGACACATACTTGTCACAAGTGAACTTGAGGTCACAAAGCCATTGATTAAAAACTCTTCTCTGTTGTCATaGTGTTGCGGTGGCTCCGGG +
Preference number: 4 (lower is better)
Translates to: GHILVTSELEVTKPLIKNSSLLS*CCGGSG
Trigger: CCCGGAGCCACCGCAACATCATGACAACAGAGAAGA...GTTTTTAATCAATGGCTTTGTGACCTCAAGTTCACTTGTGACAAGTATGTGTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644600.1
ENST00000644780.1
ENST00000650265.1
CDS-3UTR TCA 90 bp ACTATCAAGATCAGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACACTTCTGTTGGTGCTGTaGATTTTCGGCCTCAGTCAC +
Preference number: 4 (lower is better)
Translates to: TIKIRGHHTAITQLKPRTLLLVL*IFGLSH
Trigger: GTGACTGAGGCCGAAAATTCACAGCACCAACAGAAG...TGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCTGATCTTGATAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp AGAAGTCAACATGCAAACAGAGGACACATACTTGTCACAAGTGAACTTGAGGTCAGGTTCTTGTTGGCCTaGGTTTATGGCTTCCTCACC +
Preference number: 4 (lower is better)
Translates to: RSQHANRGHILVTSELEVRFLLA*VYGFLT
Trigger: GGTGAGGAAGCCATAAACTCAGGCCAACAAGAACCT...GACCTCAAGTTCACTTGTGACAAGTATGTGTCCTCTGTTTGCATGTTGACTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp CTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGCAAGATTCCTCCTGCTaGGGTTCTTGTTGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: LESLKSDYGRLASLSFCWQDSSC*GSCWPE
Trigger: CTCAGGCCAACAAGAACCTCAGCAGGAGGAATCTTG...CCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp TCTATACACCAGGCAGGAAAAAGTTGTCTGTCCCTGTACAGCTCAGAAATACTCAAGTCCTCTGCTTTCTaGTGTCCGCTCCTTGTTCTT +
Preference number: 4 (lower is better)
Translates to: SIHQAGKSCLSLYSSEILKSSAF*CPLLVL
Trigger: AAGAACAAGGAGCGGACATCAGAAAGCAGAGGACTT...GAGTATTTCTGAGCTGTACAGGGACAGACAACTTTTTCCTGCCTGGTGTATAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp AGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAGAAGTTCAATGGAAGTCCTCTGCTTTCTaGTGTCCGCTCCTTGTTCTT +
Preference number: 4 (lower is better)
Translates to: RGHHTAITQLKPRTEVQWKSSAF*CPLLVL
Trigger: AAGAACAAGGAGCGGACATCAGAAAGCAGAGGACTT...CCATTGAACTTCTGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp TTCCCTCCATTTTCACAATTGGTCATGTGGACAAAGTACTCACTCCTTCTCCTGAAGTCCTCTGCTTTCTaGTGTCCGCTCCTTGTTCTT +
Preference number: 4 (lower is better)
Translates to: FPPFSQLVMWTKYSLLLLKSSAF*CPLLVL
Trigger: AAGAACAAGGAGCGGACATCAGAAAGCAGAGGACTT...CAGGAGAAGGAGTGAGTACTTTGTCCACATGACCAATTGTGAAAATGGAGGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642643.1
ENST00000648891.1
CDS-3UTR TCA 90 bp TCCATTAGAGCTTTTGGCCCAAAGTGCCTATTTTTCTGTGAGATTTGGTCTCCTTCTTCCTCGGACACCTaGGATTTGGGCCTTTTGAGA +
Preference number: 4 (lower is better)
Translates to: SIRAFGPKCLFFCEIWSPSSSDT*DLGLLR
Trigger: TCTCAAAAGGCCCAAATCTCAGGTGTCCGAGGAAGA...AGGAGACCAAATCTCACAGAAAAATAGGCACTTTGGGCCAAAAGCTCTAATGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp ACTATCAAGATCAGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACATCTTCCTCGGACACCTaGGATTTGGGCCTTTTGAGA +
Preference number: 4 (lower is better)
Translates to: TIKIRGHHTAITQLKPRTSSSDT*DLGLLR
Trigger: TCTCAAAAGGCCCAAATCTCAGGTGTCCGAGGAAGA...TGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCTGATCTTGATAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp GAAGTCAACATGCAAACAGAGGACACATACTTGTCACAAGTGAACTTGAGGTCATCTTCCTCGGACACCTaGGATTTGGGCCTTTTGAGA +
Preference number: 4 (lower is better)
Translates to: EVNMQTEDTYLSQVNLRSSSSDT*DLGLLR
Trigger: TCTCAAAAGGCCCAAATCTCAGGTGTCCGAGGAAGA...TGACCTCAAGTTCACTTGTGACAAGTATGTGTCCTCTGTTTGCATGTTGACTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp AGTTCTCAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTCCTATAATTGCAAAGATGGGTCTGTTTTaGGTTCCGGTTCAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: SSQRLIIYWWLQIAPIIAKMGLF*VPVQEL
Trigger: CAGCTCCTGAACCGGAACTCAAAACAGACCCATCTT...TGCAATTATAGGAGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTGAGAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648181.1
ENST00000648891.1
CDS-3UTR TCA 90 bp AAAGTAGAGGTGGCACTTTTTGAGAGACTTGTGATCCTCAGGGATTGGAATAGAAAGATGGGTCTGTTTTaGGTTCCGGTTCAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: KVEVALFERLVILRDWNRKMGLF*VPVQEL
Trigger: CAGCTCCTGAACCGGAACTCAAAACAGACCCATCTT...TCTATTCCAATCCCTGAGGATCACAAGTCTCTCAAAAAGTGCCACCTCTACTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000646800.1
CDS-3UTR TCA 90 bp CAATGCAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACACTTCTTCCAAAAGATTaGGATGCTCACATACTCGTT +
Preference number: 4 (lower is better)
Translates to: QCRKAGFGQSIATPLYPTLLPKD*DAHILV
Trigger: AACGAGTATGTGAGCATCTCAATCTTTTGGAAGAAG...TGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTGCATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp CCCTTGTCATGTGGTGTCTTGTGGGGAGAACGGCTCCTAAAAGTCAATTCCTTGCTTCTTCCAAAAGATTaGGATGCTCACATACTCGTT +
Preference number: 4 (lower is better)
Translates to: PLSCGVLWGERLLKVNSLLLPKD*DAHILV
Trigger: AACGAGTATGTGAGCATCTCAATCTTTTGGAAGAAG...CAAGGAATTGACTTTTAGGAGCCGTTCTCCCCACAAGACACCACATGACAAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp GCCACATTCCTTGTCATTTGGGATGAAAGAAAGGCCCAGGATCAGACAGAAGTATCAAGTTCCTTGGTCTaGTTCGGGGCCAGTTTAAAA +
Preference number: 4 (lower is better)
Translates to: ATFLVIWDERKAQDQTEVSSSLV*FGASLK
Trigger: TTTTAAACTGGCCCCGAATCAGACCAAGGAACTTGA...TACTTCTGTCTGATCCTGGGCCTTTCTTTCATCCCAAATGACAAGGAATGTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp TCAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTCCTATAATTGCACTGGGTCAAGTTCCTTGGTCTaGTTCGGGGCCAGTTTAAAA +
Preference number: 4 (lower is better)
Translates to: SEANHLLVAPNSSYNCTGSSSLV*FGASLK
Trigger: TTTTAAACTGGCCCCGAATCAGACCAAGGAACTTGA...CCCAGTGCAATTATAGGAGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648181.1
ENST00000648891.1
CDS-3UTR TCA 90 bp CAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTCCTATAATTGCACTGGGTAGTCATGGACCTGTATaGCTTATGCAGTTCCATGAC +
Preference number: 4 (lower is better)
Translates to: QRLIIYWWLQIAPIIALGSHGPV*LMQFHD
Trigger: GTCATGGAACTGCATAAGTCATACAGGTCCATGACT...ACCCAGTGCAATTATAGGAGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648181.1
ENST00000648891.1
CDS-3UTR TCA 90 bp TCAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTCCTATAATTGCACTGGGAGTCATGGACCTGTATaGCTTATGCAGTTCCATGAC +
Preference number: 4 (lower is better)
Translates to: SEANHLLVAPNSSYNCTGSHGPV*LMQFHD
Trigger: GTCATGGAACTGCATAAGTCATACAGGTCCATGACT...CCCAGTGCAATTATAGGAGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648181.1
ENST00000648891.1
CDS-3UTR TCA 90 bp AAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAATACATACTAGTCATGGACCTGTATaGCTTATGCAGTTCCATGAC +
Preference number: 4 (lower is better)
Translates to: KAGFGQSIATPLYPTIHTSHGPV*LMQFHD
Trigger: GTCATGGAACTGCATAAGTCATACAGGTCCATGACT...AGTATGTATTGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp AGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAGTCAAGACAAACTCCAAGTCAGCCTaGGCTGGAGTCATGGACCTG +
Preference number: 4 (lower is better)
Translates to: RSFYSPCNFCTLLSIVKTNSKSA*AGVMDL
Trigger: CAGGTCCATGACTCCAGCTCAGGCTGACTTGGAGTT...TGTCTTGACTATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR TCA 90 bp GGACACATACTTGTCACAAGTGAACTTGAGGTCACAAAGCCATTGATTAAAAACAACTCCAAGTCAGCCTaGGCTGGAGTCATGGACCTG +
Preference number: 4 (lower is better)
Translates to: GHILVTSELEVTKPLIKNNSKSA*AGVMDL
Trigger: CAGGTCCATGACTCCAGCTCAGGCTGACTTGGAGTT...GTTTTTAATCAATGGCTTTGTGACCTCAAGTTCACTTGTGACAAGTATGTGTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp AAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAATACATACTAGCAGACACCTAGGATaGTATCTACTCCTTCCAAGT +
Preference number: 4 (lower is better)
Translates to: KAGFGQSIATPLYPTIHTSRHLG*YLLLPS
Trigger: ACTTGGAAGGAGTAGATATCATCCTAGGTGTCTGCT...AGTATGTATTGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp CAGCTGACAAGAGTCCTTGGAGGATTTCCCGAAGAATTCCATGGACCCTGTCAGAATCTGAAAAACGTGTaGTGTTCTACACAGACTTTC +
Preference number: 4 (lower is better)
Translates to: QLTRVLGGFPEEFHGPCQNLKNV*CSTQTF
Trigger: GAAAGTCTGTGTAGAACATCACACGTTTTTCAGATT...CTGACAGGGTCCATGGAATTCTTCGGGAAATCCTCCAAGGACTCTTGTCAGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp GGCTCAGCTTGCTCAGGTGGCTCGTCTTCCTTTTTCACTTCAGCCTTCACTGTTAATCTGAAAAACGTGTaGTGTTCTACACAGACTTTC +
Preference number: 4 (lower is better)
Translates to: GSACSGGSSSFFTSAFTVNLKNV*CSTQTF
Trigger: GAAAGTCTGTGTAGAACATCACACGTTTTTCAGATT...AACAGTGAAGGCTGAAGTGAAAAAGGAAGACGAGCCACCTGAGCAAGCTGAGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
CDS-3UTR TCA 90 bp TCCATTAGAGCTTTTGGCCCAAAGTGCCTATTTTTCTGTGAGATTTGGTCTCCTTGTTTGGTCACCATTTaGGGTGGGTACTGTCACCTC +
Preference number: 4 (lower is better)
Translates to: SIRAFGPKCLFFCEIWSPCLVTI*GGYCHL
Trigger: GAGGTGACAGTACCCACCTCAAATGGTGACCAAACA...AGGAGACCAAATCTCACAGAAAAATAGGCACTTTGGGCCAAAAGCTCTAATGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
CDS-3UTR TCA 90 bp AGTTCTCAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTCCTATAATTGCATGTTTGGTCACCATTTaGGGTGGGTACTGTCACCTC +
Preference number: 4 (lower is better)
Translates to: SSQRLIIYWWLQIAPIIACLVTI*GGYCHL
Trigger: GAGGTGACAGTACCCACCTCAAATGGTGACCAAACA...TGCAATTATAGGAGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTGAGAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648181.1
ENST00000648891.1
CDS-3UTR TCA 90 bp TTAAACTTCAATGCAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTTGTTTGGTCACCATTTaGGGTGGGTACTGTCACCTC +
Preference number: 4 (lower is better)
Translates to: LNFNAEKLALGSPLLLLCCLVTI*GGYCHL
Trigger: GAGGTGACAGTACCCACCTCAAATGGTGACCAAACA...ACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTGCATTGAAGTTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp CAATGCAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACATTTTTGATCTCCTCTTaGCTCTTGTCTAAATCCTCC +
Preference number: 4 (lower is better)
Translates to: QCRKAGFGQSIATPLYPTFLISS*LLSKSS
Trigger: GGAGGATTTAGACAAGAGTCAAGAGGAGATCAAAAA...TGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTGCATTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000643604.1
ENST00000644600.1
ENST00000644780.1
ENST00000646800.1
CDS-3UTR TCA 90 bp GAAGCATGTAGCTGCAGAGACAGTTCTCAGAGGCTAATCATCTACTGGTGGCTCTTTTTGATCTCCTCTTaGCTCTTGTCTAAATCCTCC +
Preference number: 4 (lower is better)
Translates to: EACSCRDSSQRLIIYWWLFLISS*LLSKSS
Trigger: GGAGGATTTAGACAAGAGTCAAGAGGAGATCAAAAA...GAGCCACCAGTAGATGATTAGCCTCTGAGAACTGTCTCTGCAGCTACATGCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648891.1
CDS-3UTR TCA 90 bp CAATGCAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACATCTTTTTCAGCTCACTaGTGCTGGCATGATGTTTTT +
Preference number: 4 (lower is better)
Translates to: QCRKAGFGQSIATPLYPTSFSAH*CWHDVF
Trigger: AAAAACATCATGCCAGCATCAGTGAGCTGAAAAAGA...TGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTGCATTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp CCGTGGTTCTGGTACAGACTCCATGAAGTTCTTTTTCAGCTCACTGATGCTGGCTCTTTTTCAGCTCACTaGTGCTGGCATGATGTTTTT +
Preference number: 4 (lower is better)
Translates to: PWFWYRLHEVLFQLTDAGSFSAH*CWHDVF
Trigger: AAAAACATCATGCCAGCATCAGTGAGCTGAAAAAGA...GCCAGCATCAGTGAGCTGAAAAAGAACTTCATGGAGTCTGTACCAGAACCACGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
CDS-3UTR TCA 90 bp CAGAGACAGTTCTCAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTCCTATCTGGTACAGACTCCATaGAGTTCTTTTTCAGCTCAC +
Preference number: 4 (lower is better)
Translates to: QRQFSEANHLLVAPNSSYLVQTP*SSFSAH
Trigger: GTGAGCTGAAAAAGAACTTCATGGAGTCTGTACCAG...ATAGGAGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTGAGAACTGTCTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648181.1
ENST00000648891.1
CDS-3UTR TCA 90 bp TCAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTCCTATAATTGCACTGGGCTGGTACAGACTCCATaGAGTTCTTTTTCAGCTCAC +
Preference number: 4 (lower is better)
Translates to: SEANHLLVAPNSSYNCTGLVQTP*SSFSAH
Trigger: GTGAGCTGAAAAAGAACTTCATGGAGTCTGTACCAG...CCCAGTGCAATTATAGGAGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648181.1
ENST00000648891.1
CDS-3UTR TCA 90 bp AGAAGTCAACATGCAAACAGAGGACACATACTTGTCACAAGTGAACTTGAGGTCGTTCGGAAGGGTGAGTaGGTGGATAAGCGTTTATCC +
Preference number: 4 (lower is better)
Translates to: RSQHANRGHILVTSELEVVRKGE*VDKRLS
Trigger: GGATAAACGCTTATCCACTCACTCACCCTTCCGAAC...GACCTCAAGTTCACTTGTGACAAGTATGTGTCCTCTGTTTGCATGTTGACTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp CTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGGGGCAGCCTCATAAGTaGTGGTCTTGGTCTCAGTGT +
Preference number: 4 (lower is better)
Translates to: LESLKSDYGRLASLSFCWGQPHK*WSWSQC
Trigger: ACACTGAGACCAAGACCATCACTTATGAGGCTGCCC...CCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp CCCTTGTCATGTGGTGTCTTGTGGGGAGAACGGCTCCTAAAAGTCAATTCCTTGTTCAATACGTGTCTCTaGAATCCCACCTTTTACAGT +
Preference number: 4 (lower is better)
Translates to: PLSCGVLWGERLLKVNSLFNTCL*NPTFYS
Trigger: ACTGTAAAAGGTGGGATTTCAGAGACACGTATTGAA...CAAGGAATTGACTTTTAGGAGCCGTTCTCCCCACAAGACACCACATGACAAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp CCCTTGTCATGTGGTGTCTTGTGGGGAGAACGGCTCCTAAAAGTCAATTCCTTGATAATCTTGAAAGTCTaGAGTCTGACTATGGCAGGT +
Preference number: 4 (lower is better)
Translates to: PLSCGVLWGERLLKVNSLIILKV*SLTMAG
Trigger: ACCTGCCATAGTCAGACTTCAGACTTTCAAGATTAT...CAAGGAATTGACTTTTAGGAGCCGTTCTCCCCACAAGACACCACATGACAAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp GTTGGGAGAAGCAGCTTTAGACATTTCTCTTGCTCACTGCCCTTGAGCCCCAGTACAGTATCAGATATCTaGAGCAACTTCCATGTCTTT +
Preference number: 4 (lower is better)
Translates to: VGRSSFRHFSCSLPLSPSTVSDI*SNFHVF
Trigger: AAAGACATGGAAGTTGCTTCAGATATCTGATACTGT...ACTGGGGCTCAAGGGCAGTGAGCAAGAGAAATGTCTAAAGCTGCTTCTCCCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp CTCTTTCCCTCCCTCCTGTTGTTCATGTCTCACATGGGTACCAAAAGAAAAATGCCTTGTCATTTGGGATaGAAGAAAGGCCCAGGATCA +
Preference number: 4 (lower is better)
Translates to: LFPSLLLFMSHMGTKRKMPCHLG*KKGPGS
Trigger: TGATCCTGGGCCTTTCTTTCATCCCAAATGACAAGG...CATTTTTCTTTTGGTACCCATGTGAGACATGAACAACAGGAGGGAGGGAAAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp GCCACATTCCTTGTCATTTGGGATGAAAGAAAGGCCCAGGATCAGACAGAAGTATGGCTTCTAAGAGCCTaGAAGGCATTAGAGCTCTTT +
Preference number: 4 (lower is better)
Translates to: ATFLVIWDERKAQDQTEVWLLRA*KALELF
Trigger: AAAGAGCTCTAATGCCTTTCAGGCTCTTAGAAGCCA...TACTTCTGTCTGATCCTGGGCCTTTCTTTCATCCCAAATGACAAGGAATGTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR TCA 90 bp TCTATACACCAGGCAGGAAAAAGTTGTCTGTCCCTGTACAGCTCAGAAATACTCAGAGGTGGCACTTTTTaGGAGACTTGTGATCCTCAG +
Preference number: 4 (lower is better)
Translates to: SIHQAGKSCLSLYSSEILRGGTF*ETCDPQ
Trigger: CTGAGGATCACAAGTCTCTCAAAAAGTGCCACCTCT...GAGTATTTCTGAGCTGTACAGGGACAGACAACTTTTTCCTGCCTGGTGTATAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp GGCAGGAAAAAGTTGTCTGTCCCTGTACAGCTCAGAAATACTCATAAAAAGGCCAGAGGTGGCACTTTTTaGGAGACTTGTGATCCTCAG +
Preference number: 4 (lower is better)
Translates to: GRKKLSVPVQLRNTHKKARGGTF*ETCDPQ
Trigger: CTGAGGATCACAAGTCTCTCAAAAAGTGCCACCTCT...GGCCTTTTTATGAGTATTTCTGAGCTGTACAGGGACAGACAACTTTTTCCTGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp GGCAGGAAAAAGTTGTCTGTCCCTGTACAGCTCAGAAATACTCATAAAAAGGCCAACAGGTTAGGCATGTaGGTTGTCCTGAAGAGAGAG +
Preference number: 4 (lower is better)
Translates to: GRKKLSVPVQLRNTHKKANRLGM*VVLKRE
Trigger: CTCTCTCTTCAGGACAACTCACATGCCTAACCTGTT...GGCCTTTTTATGAGTATTTCTGAGCTGTACAGGGACAGACAACTTTTTCCTGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp ACTCCTTTGTACCCCACAATACATACTCTACAAAGAGTAACATTTGACAGAAAAAGGCAGAGGTTGCAGTaGGCTGAGATCGCGCCACTG +
Preference number: 4 (lower is better)
Translates to: TPLYPTIHTLQRVTFDRKRQRLQ*AEIAPL
Trigger: CAGTGGCGCGATCTCAGCTCACTGCAACCTCTGCCT...TTTTCTGTCAAATGTTACTCTTTGTAGAGTATGTATTGTGGGGTACAAAGGAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR TCA 90 bp TTCAACACAAGTACACGAACAAACAGGTCTGAAGTATATCAGGAAAACAAAGTAGGCCGGAGAATTGCTTaGACCCGGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: FNTSTRTNRSEVYQENKVGRRIA*TREAEV
Trigger: AACCTCTGCCTCCCGGGTTCAAGCAATTCTCCGGCC...TACTTTGTTTTCCTGATATACTTCAGACCTGTTTGTTCGTGTACTTGTGTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR TCA 90 bp ATGTTGCCCAGGCTGGTCTTAAACTACTGGACTCAAGTGATCTGCCTGTCTTGGAAACTTTCTAGTCCCTaGAGGCACAGTTTGAATACA +
Preference number: 4 (lower is better)
Translates to: MLPRLVLNYWTQVICLSWKLSSP*RHSLNT
Trigger: TGTATTCAAACTGTGCCTTCAGGGACTAGAAAGTTT...CCAAGACAGGCAGATCACTTGAGTCCAGTAGTTTAAGACCAGCCTGGGCAACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000645184.1
ENST00000648181.1
CDS-3UTR TCA 90 bp CCGTGGTTCTGGTACAGACTCCATGAAGTTCTTTTTCAGCTCACTGATGCTGGCAAACTTTCTAGTCCCTaGAGGCACAGTTTGAATACA +
Preference number: 4 (lower is better)
Translates to: PWFWYRLHEVLFQLTDAGKLSSP*RHSLNT
Trigger: TGTATTCAAACTGTGCCTTCAGGGACTAGAAAGTTT...GCCAGCATCAGTGAGCTGAAAAAGAACTTCATGGAGTCTGTACCAGAACCACGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642643.1
ENST00000648891.1
CDS-3UTR TCA 90 bp ATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAGTCAATGGAGTGCAGTGGTGTaGTCTTGGCTCACCGCAACC +
Preference number: 4 (lower is better)
Translates to: IEKFLFPLQFLYSAIHSQWSAVV*SWLTAT
Trigger: GGTTGCGGTGAGCCAAGATCACACCACTGCACTCCA...TTGACTATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000646800.1
CDS-3UTR GCA 90 bp GAAGCATGTAGCTGCAGAGACAGTTCTCAGAGGCTAATCATCTACTGGTGGCTCATTATCTCCTTCAGCTaGTGTTTGACAAGATTCCTC +
Preference number: 4 (lower is better)
Translates to: EACSCRDSSQRLIIYWWLIISFS*CLTRFL
Trigger: GAGGAATCTTGTCAAACAGCAGCTGAAGGAGATAAT...GAGCCACCAGTAGATGATTAGCCTCTGAGAACTGTCTCTGCAGCTACATGCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000645184.1
ENST00000648181.1
ENST00000648891.1
CDS-3UTR GCA 90 bp GAAGTCAACATGCAAACAGAGGACACATACTTGTCACAAGTGAACTTGAGGTCAGTCGTGAAAGTCCTCTaGTTTCTGATGTCCGCTCCT +
Preference number: 4 (lower is better)
Translates to: EVNMQTEDTYLSQVNLRSVVKVL*FLMSAP
Trigger: AGGAGCGGACATCAGAAAGCAGAGGACTTTCACGAC...TGACCTCAAGTTCACTTGTGACAAGTATGTGTCCTCTGTTTGCATGTTGACTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR GCA 90 bp AGAAGTCAACATGCAAACAGAGGACACATACTTGTCACAAGTGAACTTGAGGTCGTCGTGAAAGTCCTCTaGTTTCTGATGTCCGCTCCT +
Preference number: 4 (lower is better)
Translates to: RSQHANRGHILVTSELEVVVKVL*FLMSAP
Trigger: AGGAGCGGACATCAGAAAGCAGAGGACTTTCACGAC...GACCTCAAGTTCACTTGTGACAAGTATGTGTCCTCTGTTTGCATGTTGACTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR GCA 90 bp AGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAGAAGTTCAATGGCTGACTCTACTTCTTTaGCTTCTTCCTCGGACACCT +
Preference number: 4 (lower is better)
Translates to: RGHHTAITQLKPRTEVQWLTLLL*LLPRTP
Trigger: AGGTGTCCGAGGAAGAAGGCAAAGAAGTAGAGTCAG...CCATTGAACTTCTGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR GCA 90 bp GGCAGGAAAAAGTTGTCTGTCCCTGTACAGCTCAGAAATACTCATAAAAAGGCCCTGACTCTACTTCTTTaGCTTCTTCCTCGGACACCT +
Preference number: 4 (lower is better)
Translates to: GRKKLSVPVQLRNTHKKALTLLL*LLPRTP
Trigger: AGGTGTCCGAGGAAGAAGGCAAAGAAGTAGAGTCAG...GGCCTTTTTATGAGTATTTCTGAGCTGTACAGGGACAGACAACTTTTTCCTGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR GCA 90 bp CAATGCAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAGCTGTGTTTCTGCACTaGTTAATGAATGAAGATCCA +
Preference number: 4 (lower is better)
Translates to: QCRKAGFGQSIATPLYPTAVFLH*LMNEDP
Trigger: TGGATCTTCATTCATTAAGCAGTGCAGAAACACAGC...TGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTGCATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR GCA 90 bp GAAGCTGGAACTGGGATTCTAAGGAGCCTTGAGGCCAATGTGTTTGTGGGAAGCTCCAAAAGATTGAGATaGTCACATACTCGTTTAAGC +
Preference number: 4 (lower is better)
Translates to: EAGTGILRSLEANVFVGSSKRLR*SHTRLS
Trigger: GCTTAAACGAGTATGTGAGCATCTCAATCTTTTGGA...GCTTCCCACAAACACATTGGCCTCAAGGCTCCTTAGAATCCCAGTTCCAGCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp GAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGTTTACAGGGCAGACGTCCTaGAACTATGTCCTGCCGAAG +
Preference number: 4 (lower is better)
Translates to: ESLKSDYGRLASLSFCWFTGQTS*NYVLPK
Trigger: CTTCGGCAGGACATAGTTGCAGGACGTCTGCCCTGT...AAACCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp CAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAATACAGACCTGTATGACTTATaGAGTTCCATGACCTTCTCT +
Preference number: 4 (lower is better)
Translates to: QKSWLWAVHCYSFVPHNTDLYDL*SSMTFS
Trigger: AGAGAAGGTCATGGAACTGCATAAGTCATACAGGTC...TGTATTGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR GCA 90 bp CTCTTTCCCTCCCTCCTGTTGTTCATGTCTCACATGGGTACCAAAAGAAAAATGATGGTACTTTCATACTaGTCTTGCTCTCCAGGCCGA +
Preference number: 4 (lower is better)
Translates to: LFPSLLLFMSHMGTKRKMMVLSY*SCSPGR
Trigger: TCGGCCTGGAGAGCAAGAGCAGTATGAAAGTACCAT...CATTTTTCTTTTGGTACCCATGTGAGACATGAACAACAGGAGGGAGGGAAAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp AGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAGAAGTTCAATGGATGGTACTTTCATACTaGTCTTGCTCTCCAGGCCGA +
Preference number: 4 (lower is better)
Translates to: RGHHTAITQLKPRTEVQWMVLSY*SCSPGR
Trigger: TCGGCCTGGAGAGCAAGAGCAGTATGAAAGTACCAT...CCATTGAACTTCTGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR GCA 90 bp GGCAGGAAAAAGTTGTCTGTCCCTGTACAGCTCAGAAATACTCATAAAAAGGCCATGGTACTTTCATACTaGTCTTGCTCTCCAGGCCGA +
Preference number: 4 (lower is better)
Translates to: GRKKLSVPVQLRNTHKKAMVLSY*SCSPGR
Trigger: TCGGCCTGGAGAGCAAGAGCAGTATGAAAGTACCAT...GGCCTTTTTATGAGTATTTCTGAGCTGTACAGGGACAGACAACTTTTTCCTGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR GCA 90 bp AGCTGCAGAGACAGTTCTCAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTCTAGCGCAAGAAATTTaGTTTTGGGAATGGTGTCTG +
Preference number: 4 (lower is better)
Translates to: SCRDSSQRLIIYWWLQIALAQEI*FWEWCL
Trigger: CAGACACCATTCCCAAAAGCAAATTTCTTGCGCTAG...AGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTGAGAACTGTCTCTGCAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648181.1
ENST00000648891.1
CDS-3UTR GCA 90 bp AGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAGTCAAGACAGGACGCCCGTTTACTTaGTGTACGCTCGAAGTGTGG +
Preference number: 4 (lower is better)
Translates to: RSFYSPCNFCTLLSIVKTGRPFT*CTLEVW
Trigger: CCACACTTCGAGCGTACAGCAAGTAAACGGGCGTCC...TGTCTTGACTATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR GCA 90 bp TTGGCAGTGTTACCTTTAGGTAATACAAAGCTGGAATGCCCAATATTTTTCCTCGGACGCCCGTTTACTTaGTGTACGCTCGAAGTGTGG +
Preference number: 4 (lower is better)
Translates to: LAVLPLGNTKLECPIFFLGRPFT*CTLEVW
Trigger: CCACACTTCGAGCGTACAGCAAGTAAACGGGCGTCC...GAGGAAAAATATTGGGCATTCCAGCTTTGTATTACCTAAAGGTAACACTGCCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000636666.1
ENST00000644342.1
ENST00000646800.1
CDS-3UTR GCA 90 bp GGATCAATGAGATCTAGAAGAATCTCTTGGTATAAACTCCCAATAGAAACTGAACCGAGGACTTCGGTCTaGCGAATCGACAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: GSMRSRRISWYKLPIETEPRTSV*RIDSCC
Trigger: GCAGCAGCTGTCGATTCGGCAGACCGAAGTCCTCGG...TTCAGTTTCTATTGGGAGTTTATACCAAGAGATTCTTCTAGATCTCATTGATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp TTCAACACAAGTACACGAACAAACAGGTCTGAAGTATATCAGGAAAACAAAGTACCGAGGACTTCGGTCTaGCGAATCGACAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: FNTSTRTNRSEVYQENKVPRTSV*RIDSCC
Trigger: GCAGCAGCTGTCGATTCGGCAGACCGAAGTCCTCGG...TACTTTGTTTTCCTGATATACTTCAGACCTGTTTGTTCGTGTACTTGTGTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR GCA 90 bp CAGATATCTGAAGCAACTTCCATGTCTTTGACCCAAAGAAGCTCCAAAAAGAAACTGAGTAATGGCAGGTaGAGAAGTGGGCCGAGGACT +
Preference number: 4 (lower is better)
Translates to: QISEATSMSLTQRSSKKKLSNGR*RSGPRT
Trigger: AGTCCTCGGCCCACTTCTGCACCTGCCATTACTCAG...TTTCTTTTTGGAGCTTCTTTGGGTCAAAGACATGGAAGTTGCTTCAGATATCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp GAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGTTTCTGAGTAATGGCAGGTaGAGAAGTGGGCCGAGGACT +
Preference number: 4 (lower is better)
Translates to: ESLKSDYGRLASLSFCWFLSNGR*RSGPRT
Trigger: AGTCCTCGGCCCACTTCTGCACCTGCCATTACTCAG...AAACCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp GTCCAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATACTGAGTAATGGCAGGTaGAGAAGTGGGCCGAGGACT +
Preference number: 4 (lower is better)
Translates to: VQLRSFYSPCNFCTLLSILSNGR*RSGPRT
Trigger: AGTCCTCGGCCCACTTCTGCACCTGCCATTACTCAG...TATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644470.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR GCA 90 bp ATTGTCCAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCCTGAGTAATGGCAGGTaGAGAAGTGGGCCGAGGACT +
Preference number: 4 (lower is better)
Translates to: IVQLRSFYSPCNFCTLLSLSNGR*RSGPRT
Trigger: AGTCCTCGGCCCACTTCTGCACCTGCCATTACTCAG...GGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTGGACAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644470.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR GCA 90 bp GGATCAATGAGATCTAGAAGAATCTCTTGGTATAAACTCCCAATAGAAACTGAAGGCTCTGGCTCAGCTTaGTCAGGTGGCTCGTCTTCC +
Preference number: 4 (lower is better)
Translates to: GSMRSRRISWYKLPIETEGSGSA*SGGSSS
Trigger: GGAAGACGAGCCACCTGAGCAAGCTGAGCCAGAGCC...TTCAGTTTCTATTGGGAGTTTATACCAAGAGATTCTTCTAGATCTCATTGATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp GACATTAACCAAATCATCCATATTGGTACATTCAAGTGCCATAAAAAGCAAGCTGGCTCTGGCTCAGCTTaGTCAGGTGGCTCGTCTTCC +
Preference number: 4 (lower is better)
Translates to: DINQIIHIGTFKCHKKQAGSGSA*SGGSSS
Trigger: GGAAGACGAGCCACCTGAGCAAGCTGAGCCAGAGCC...AGCTTGCTTTTTATGGCACTTGAATGTACCAATATGGATGATTTGGTTAATGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR GCA 90 bp ACTATCAAGATCAGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACATTTTTCCACCTTCCATaGTTCTGTGGGCTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: TIKIRGHHTAITQLKPRTFFHLP*FCGLWL
Trigger: GAGCCAGAGCCCACAGAAGCATGGAAGGTGGAAAAA...TGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCTGATCTTGATAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR GCA 90 bp TTAAACTTCAATGCAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTTTTTTCCACCTTCCATaGTTCTGTGGGCTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: LNFNAEKLALGSPLLLLCFFHLP*FCGLWL
Trigger: GAGCCAGAGCCCACAGAAGCATGGAAGGTGGAAAAA...ACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTGCATTGAAGTTTAA
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR GCA 90 bp TTAGGGGCCTCCTTGGTTTACTATATAATTGTGGGGAACCAGTCCAGATATTTCTTTTTCCACCTTCCATaGTTCTGTGGGCTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: LGASLVYYIIVGNQSRYFFFHLP*FCGLWL
Trigger: GAGCCAGAGCCCACAGAAGCATGGAAGGTGGAAAAA...GAAATATCTGGACTGGTTCCCCACAATTATATAGTAAACCAAGGAGGCCCCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000648181.1
CDS-3UTR GCA 90 bp CTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGGACATGTCTGGGTGCTaGTCCTTTGCCTCCTTGATG +
Preference number: 4 (lower is better)
Translates to: LESLKSDYGRLASLSFCWDMSGC*SFASLM
Trigger: CATCAAGGAGGCAAAGGAGCAGCACCCAGACATGTC...CCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp AATCTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCCTCAGCAGAGGGCTCTaGCTTACCAAAACCACCCGC +
Preference number: 4 (lower is better)
Translates to: NLESLKSDYGRLASLSFCLSRGL*LTKTTR
Trigger: GCGGGTGGTTTTGGTAAGGCAGAGCCCTCTGCTGAG...GCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp CCCTTGTCATGTGGTGTCTTGTGGGGAGAACGGCTCCTAAAAGTCAATTCCTTGGCTTTTGGCCCAAAGTaGCTATTTTTCTGTGAGATT +
Preference number: 4 (lower is better)
Translates to: PLSCGVLWGERLLKVNSLAFGPK*LFFCEI
Trigger: AATCTCACAGAAAAATAGGCACTTTGGGCCAAAAGC...CAAGGAATTGACTTTTAGGAGCCGTTCTCCCCACAAGACACCACATGACAAGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp GGGCTCTTTCCCTCCCTCCTGTTGTTCATGTCTCACATGGGTACCAAAAGAAAATTCCCCTGTGTGAAGTaGACACTCTCAAAACTAGAA +
Preference number: 4 (lower is better)
Translates to: GLFPSLLLFMSHMGTKRKFPCVK*TLSKLE
Trigger: TTCTAGTTTTGAGAGTGTGCACTTCACACAGGGGAA...TTTTCTTTTGGTACCCATGTGAGACATGAACAACAGGAGGGAGGGAAAGAGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp GGATCAATGAGATCTAGAAGAATCTCTTGGTATAAACTCCCAATAGAAACTGAACCGAGATCGCGCCACTaGACTCCAGCTTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: GSMRSRRISWYKLPIETEPRSRH*TPAWAT
Trigger: TGTTGCCCAAGCTGGAGTGCAGTGGCGCGATCTCGG...TTCAGTTTCTATTGGGAGTTTATACCAAGAGATTCTTCTAGATCTCATTGATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp GAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGTTTCTGAGGCAAGAGAACTaGTTGAACCCAGGAGGCGGA +
Preference number: 4 (lower is better)
Translates to: ESLKSDYGRLASLSFCWFLRQEN*LNPGGG
Trigger: TCCGCCTCCTGGGTTCAAGCAGTTCTCTTGCCTCAG...AAACCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp CTCTTTCCCTCCCTCCTGTTGTTCATGTCTCACATGGGTACCAAAAGAAAAATGGAAGGACACCCATCTTaGTGGGCTTGTCCAAATCTA +
Preference number: 4 (lower is better)
Translates to: LFPSLLLFMSHMGTKRKMEGHPS*WACPNL
Trigger: TAGATTTGGACAAGCCCAGCAAGATGGGTGTCCTTC...CATTTTTCTTTTGGTACCCATGTGAGACATGAACAACAGGAGGGAGGGAAAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR GCA 90 bp TCCAAAGGGGATAAGACTAGGGAGAGACGCGGAAGTCCCACTAAGCTGGCTTTGAGCAGACTTGATTATTaGCTGTGTAGTCTAAAGATT +
Preference number: 4 (lower is better)
Translates to: SKGDKTRERRGSPTKLALSRLDY*LCSLKI
Trigger: AATCTTTAGACTACACAGGCAATAATCAAGTCTGCT...CAAAGCCAGCTTAGTGGGACTTCCGCGTCTCTCCCTAGTCTTATCCCCTTTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR GCA 90 bp ATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAGTCAACTGAGGCCGGAGAATTaGTTGAACCCGGGAGGCAGA +
Preference number: 4 (lower is better)
Translates to: IEKFLFPLQFLYSAIHSQLRPEN*LNPGGR
Trigger: TCTGCCTCCCGGGTTCAAGCAATTCTCCGGCCTCAG...TTGACTATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR GCA 90 bp AAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAATACATACTGCACGTTCCTGTGTCTaGTTTCACAGTAGAAGATCA +
Preference number: 4 (lower is better)
Translates to: KAGFGQSIATPLYPTIHTARSCV*FHSRRS
Trigger: TGATCTTCTACTGTGAAAGCAGACACAGGAACGTGC...AGTATGTATTGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR GCA 90 bp AGTTCTCAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTCCTATAATTGCACCAGAAGCATGTAGCTaGAGAGACAGTTCTCAGAGG +
Preference number: 4 (lower is better)
Translates to: SSQRLIIYWWLQIAPIIAPEACS*RDSSQR
Trigger: CCTCTGAGAACTGTCTCTGCAGCTACATGCTTCTGG...TGCAATTATAGGAGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTGAGAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648181.1
ENST00000648891.1
CDS-3UTR GCA 90 bp GGATCAATGAGATCTAGAAGAATCTCTTGGTATAAACTCCCAATAGAAACTGAACAGGGGAGGCTTCCATaGTTCTGTGGGCTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: GSMRSRRISWYKLPIETEQGRLP*FCGLWL
Trigger: GAGCCAGAGCCCACAGAAGCATGGAAGCCTCCCCTG...TTCAGTTTCTATTGGGAGTTTATACCAAGAGATTCTTCTAGATCTCATTGATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649717.1
CDS-3UTR CCA 90 bp GGGCTCTTTCCCTCCCTCCTGTTGTTCATGTCTCACATGGGTACCAAAAGAAAAATGAAGATCCAAAGATaGGTCTGTTTTGAGTTCCGG +
Preference number: 4 (lower is better)
Translates to: GLFPSLLLFMSHMGTKRKMKIQR*VCFEFR
Trigger: CCGGAACTCAAAACAGACCCATCTTTGGATCTTCAT...TTTTCTTTTGGTACCCATGTGAGACATGAACAACAGGAGGGAGGGAAAGAGCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp TCCAAAGGGGATAAGACTAGGGAGAGACGCGGAAGTCCCACTAAGCTGGCTTTGCTTTTACTTCTATTTTaGAGCACTCTTCAAGTCCTT +
Preference number: 4 (lower is better)
Translates to: SKGDKTRERRGSPTKLALLLLLF*STLQVL
Trigger: AAGGACTTGAAGAGTGCTCCAAAATAGAAGTAAAAG...CAAAGCCAGCTTAGTGGGACTTCCGCGTCTCTCCCTAGTCTTATCCCCTTTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp GAAGCTGGAACTGGGATTCTAAGGAGCCTTGAGGCCAATGTGTTTGTGGGAAGCTTGCGTTATCCCAAATaGCTAGACCAAAATAGTCTT +
Preference number: 4 (lower is better)
Translates to: EAGTGILRSLEANVFVGSLRYPK*LDQNSL
Trigger: AAGACTATTTTGGTCTAGCCATTTGGGATAACGCAA...GCTTCCCACAAACACATTGGCCTCAAGGCTCCTTAGAATCCCAGTTCCAGCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp CAGCTGACAAGAGTCCTTGGAGGATTTCCCGAAGAATTCCATGGACCCTGTCAGTTGCGTTATCCCAAATaGCTAGACCAAAATAGTCTT +
Preference number: 4 (lower is better)
Translates to: QLTRVLGGFPEEFHGPCQLRYPK*LDQNSL
Trigger: AAGACTATTTTGGTCTAGCCATTTGGGATAACGCAA...CTGACAGGGTCCATGGAATTCTTCGGGAAATCCTCCAAGGACTCTTGTCAGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp CCAACACAGCTGACAAGAGTCCTTGGAGGATTTCCCGAAGAATTCCATGGACCCCTGTGCTGGGTCAGGTaGATAAAACTTTACATTAAA +
Preference number: 4 (lower is better)
Translates to: PTQLTRVLGGFPEEFHGPLCWVR*IKLYIK
Trigger: TTTAATGTAAAGTTTTATCCACCTGACCCAGCACAG...GGGTCCATGGAATTCTTCGGGAAATCCTCCAAGGACTCTTGTCAGCTGTGTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp CCCTTGTCATGTGGTGTCTTGTGGGGAGAACGGCTCCTAAAAGTCAATTCCTTGCCAGTTCAGACTGGATaGTGTAAGAACCTAATAATG +
Preference number: 4 (lower is better)
Translates to: PLSCGVLWGERLLKVNSLPVQTG*CKNLIM
Trigger: CATTATTAGGTTCTTACACCATCCAGTCTGAACTGG...CAAGGAATTGACTTTTAGGAGCCGTTCTCCCCACAAGACACCACATGACAAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp AGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAGTCAAGACACACGCCATGGAGTTCTaGGTCGTAGTCTCCCAGTTC +
Preference number: 4 (lower is better)
Translates to: RSFYSPCNFCTLLSIVKTHAMEF*VVVSQF
Trigger: GAACTGGGAGACTACGACCCAGAACTCCATGGCGTG...TGTCTTGACTATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000646800.1
CDS-3UTR CCA 90 bp GTCCAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATACACGCCATGGAGTTCTaGGTCGTAGTCTCCCAGTTC +
Preference number: 4 (lower is better)
Translates to: VQLRSFYSPCNFCTLLSIHAMEF*VVVSQF
Trigger: GAACTGGGAGACTACGACCCAGAACTCCATGGCGTG...TATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000646800.1
CDS-3UTR CCA 90 bp GGCAGGAAAAAGTTGTCTGTCCCTGTACAGCTCAGAAATACTCATAAAAAGGCCCCTGAGCTGGAGTCATaGACCTGTATGACTTATGCA +
Preference number: 4 (lower is better)
Translates to: GRKKLSVPVQLRNTHKKAPELES*TCMTYA
Trigger: TGCATAAGTCATACAGGTCCATGACTCCAGCTCAGG...GGCCTTTTTATGAGTATTTCTGAGCTGTACAGGGACAGACAACTTTTTCCTGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CCA 90 bp CAGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAGAAGTTCAATGCCTGAGCTGGAGTCATaGACCTGTATGACTTATGCA +
Preference number: 4 (lower is better)
Translates to: QRASYSNNTVEAKDRSSMPELES*TCMTYA
Trigger: TGCATAAGTCATACAGGTCCATGACTCCAGCTCAGG...CATTGAACTTCTGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CCA 90 bp AGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAGAAGTTCAATGGCCTGAGCTGGAGTCATaGACCTGTATGACTTATGCA +
Preference number: 4 (lower is better)
Translates to: RGHHTAITQLKPRTEVQWPELES*TCMTYA
Trigger: TGCATAAGTCATACAGGTCCATGACTCCAGCTCAGG...CCATTGAACTTCTGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CCA 90 bp CAGCTGACAAGAGTCCTTGGAGGATTTCCCGAAGAATTCCATGGACCCTGTCAGCACTGTATCGAAATTTaGATCCTAGCGCAAGAAATT +
Preference number: 4 (lower is better)
Translates to: QLTRVLGGFPEEFHGPCQHCIEI*ILAQEI
Trigger: AATTTCTTGCGCTAGGATCCAAATTTCGATACAGTG...CTGACAGGGTCCATGGAATTCTTCGGGAAATCCTCCAAGGACTCTTGTCAGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp AGAAGTCAACATGCAAACAGAGGACACATACTTGTCACAAGTGAACTTGAGGTCCTCAGCTTGCTCAGGTaGCTCGTCTTCCTTTTTCAC +
Preference number: 4 (lower is better)
Translates to: RSQHANRGHILVTSELEVLSLLR*LVFLFH
Trigger: GTGAAAAAGGAAGACGAGCCACCTGAGCAAGCTGAG...GACCTCAAGTTCACTTGTGACAAGTATGTGTCCTCTGTTTGCATGTTGACTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CCA 90 bp AAAGTAGAGGTGGCACTTTTTGAGAGACTTGTGATCCTCAGGGATTGGAATAGACTCAGCTTGCTCAGGTaGCTCGTCTTCCTTTTTCAC +
Preference number: 4 (lower is better)
Translates to: KVEVALFERLVILRDWNRLSLLR*LVFLFH
Trigger: GTGAAAAAGGAAGACGAGCCACCTGAGCAAGCTGAG...TCTATTCCAATCCCTGAGGATCACAAGTCTCTCAAAAAGTGCCACCTCTACTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR CCA 90 bp AGTTCTCAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTCCTATAATTGCACTCAGCTTGCTCAGGTaGCTCGTCTTCCTTTTTCAC +
Preference number: 4 (lower is better)
Translates to: SSQRLIIYWWLQIAPIIALSLLR*LVFLFH
Trigger: GTGAAAAAGGAAGACGAGCCACCTGAGCAAGCTGAG...TGCAATTATAGGAGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTGAGAACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648181.1
ENST00000648891.1
CDS-3UTR CCA 90 bp ATTGTCCAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCCCTTCCATGCTTCTGTaGGCTCTGGCTCAGCTTGCT +
Preference number: 4 (lower is better)
Translates to: IVQLRSFYSPCNFCTLLSPSMLL*ALAQLA
Trigger: AGCAAGCTGAGCCAGAGCCCACAGAAGCATGGAAGG...GGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTGGACAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644470.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR CCA 90 bp GGACACATACTTGTCACAAGTGAACTTGAGGTCACAAAGCCATTGATTAAAAACCCTTCCATGCTTCTGTaGGCTCTGGCTCAGCTTGCT +
Preference number: 4 (lower is better)
Translates to: GHILVTSELEVTKPLIKNPSMLL*ALAQLA
Trigger: AGCAAGCTGAGCCAGAGCCCACAGAAGCATGGAAGG...GTTTTTAATCAATGGCTTTGTGACCTCAAGTTCACTTGTGACAAGTATGTGTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CCA 90 bp GAAGTCAACATGCAAACAGAGGACACATACTTGTCACAAGTGAACTTGAGGTCAGGTCACCATTTGAGGTaGGTACTGTCACCTCGATGT +
Preference number: 4 (lower is better)
Translates to: EVNMQTEDTYLSQVNLRSGHHLR*VLSPRC
Trigger: ACATCGAGGTGACAGTACCCACCTCAAATGGTGACC...TGACCTCAAGTTCACTTGTGACAAGTATGTGTCCTCTGTTTGCATGTTGACTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CCA 90 bp GGCAGGAAAAAGTTGTCTGTCCCTGTACAGCTCAGAAATACTCATAAAAAGGCCACTAGGCCGTGGTTCTaGTACAGACTCCATGAAGTT +
Preference number: 4 (lower is better)
Translates to: GRKKLSVPVQLRNTHKKATRPWF*YRLHEV
Trigger: AACTTCATGGAGTCTGTACCAGAACCACGGCCTAGT...GGCCTTTTTATGAGTATTTCTGAGCTGTACAGGGACAGACAACTTTTTCCTGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CCA 90 bp CAGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAGAAGTTCAATGACTAGGCCGTGGTTCTaGTACAGACTCCATGAAGTT +
Preference number: 4 (lower is better)
Translates to: QRASYSNNTVEAKDRSSMTRPWF*YRLHEV
Trigger: AACTTCATGGAGTCTGTACCAGAACCACGGCCTAGT...CATTGAACTTCTGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CCA 90 bp TCTATACACCAGGCAGGAAAAAGTTGTCTGTCCCTGTACAGCTCAGAAATACTCACTAGGCCGTGGTTCTaGTACAGACTCCATGAAGTT +
Preference number: 4 (lower is better)
Translates to: SIHQAGKSCLSLYSSEILTRPWF*YRLHEV
Trigger: AACTTCATGGAGTCTGTACCAGAACCACGGCCTAGT...GAGTATTTCTGAGCTGTACAGGGACAGACAACTTTTTCCTGCCTGGTGTATAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CCA 90 bp AAAAATGCACACACCCGAAATGAGTTCAAACCAGCCGAAACAAAACTCAGGCAGACTAGGCCGTGGTTCTaGTACAGACTCCATGAAGTT +
Preference number: 4 (lower is better)
Translates to: KNAHTRNEFKPAETKLRQTRPWF*YRLHEV
Trigger: AACTTCATGGAGTCTGTACCAGAACCACGGCCTAGT...CTGCCTGAGTTTTGTTTCGGCTGGTTTGAACTCATTTCGGGTGTGTGCATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR CCA 90 bp GAAGTCAACATGCAAACAGAGGACACATACTTGTCACAAGTGAACTTGAGGTCACCATTCACTAGGCCGTaGTTCTGGTACAGACTCCAT +
Preference number: 4 (lower is better)
Translates to: EVNMQTEDTYLSQVNLRSPFTRP*FWYRLH
Trigger: ATGGAGTCTGTACCAGAACCACGGCCTAGTGAATGG...TGACCTCAAGTTCACTTGTGACAAGTATGTGTCCTCTGTTTGCATGTTGACTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CCA 90 bp AAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAATACATACTGGAAGGGTGAGTGAGTaGATAAGCGTTTATCCCATT +
Preference number: 4 (lower is better)
Translates to: KAGFGQSIATPLYPTIHTGRVSE*ISVYPI
Trigger: AATGGGATAAACGCTTATCCACTCACTCACCCTTCC...AGTATGTATTGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CCA 90 bp CAGAGACAGTTCTCAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTCCTATGGAAGGGTGAGTGAGTaGATAAGCGTTTATCCCATT +
Preference number: 4 (lower is better)
Translates to: QRQFSEANHLLVAPNSSYGRVSE*ISVYPI
Trigger: AATGGGATAAACGCTTATCCACTCACTCACCCTTCC...ATAGGAGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTGAGAACTGTCTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648181.1
ENST00000648891.1
CDS-3UTR CCA 90 bp GAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGTTTATCTCGGTCTCCTGGTaGACGACCACCTTGGTCACT +
Preference number: 4 (lower is better)
Translates to: ESLKSDYGRLASLSFCWFISVSW*TTTLVT
Trigger: AGTGACCAAGGTGGTCGTCCACCAGGAGACCGAGAT...AAACCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp CACTGTATCGAAATTTGGATCCTAGCGCAAGAAATTTGCTTTTGGGAATGGTGTCTGGTTTCTCTTGGATaGGAGAAGGGCAGAGTTGGG +
Preference number: 4 (lower is better)
Translates to: HCIEIWILAQEICFWEWCLVSLG*EKGRVG
Trigger: CCCAACTCTGCCCTTCTCCCATCCAAGAGAAACCAG...ACACCATTCCCAAAAGCAAATTTCTTGCGCTAGGATCCAAATTTCGATACAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643155.1
CDS-3UTR CCA 90 bp TCCATTAGAGCTTTTGGCCCAAAGTGCCTATTTTTCTGTGAGATTTGGTCTCCTATACCCCTTGTCATGTaGTGTCTTGTGGGGAGAACG +
Preference number: 4 (lower is better)
Translates to: SIRAFGPKCLFFCEIWSPIPLVM*CLVGRT
Trigger: CGTTCTCCCCACAAGACACCACATGACAAGGGGTAT...AGGAGACCAAATCTCACAGAAAAATAGGCACTTTGGGCCAAAAGCTCTAATGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp CAGATATCTGAAGCAACTTCCATGTCTTTGACCCAAAGAAGCTCCAAAAAGAAAGGGAATGAGCAGGGCTaGGGCTTATACCCCTTGTCA +
Preference number: 4 (lower is better)
Translates to: QISEATSMSLTQRSSKKKGNEQG*GLYPLS
Trigger: TGACAAGGGGTATAAGCCCCAGCCCTGCTCATTCCC...TTTCTTTTTGGAGCTTCTTTGGGTCAAAGACATGGAAGTTGCTTCAGATATCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp CCCTTGTCATGTGGTGTCTTGTGGGGAGAACGGCTCCTAAAAGTCAATTCCTTGTCTATTTTAGGAAGCTaGAACTGGGATTCTAAGGAG +
Preference number: 4 (lower is better)
Translates to: PLSCGVLWGERLLKVNSLSILGS*NWDSKE
Trigger: CTCCTTAGAATCCCAGTTCCAGCTTCCTAAAATAGA...CAAGGAATTGACTTTTAGGAGCCGTTCTCCCCACAAGACACCACATGACAAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp AAAAATGCACACACCCGAAATGAGTTCAAACCAGCCGAAACAAAACTCAGGCAGACAAAACTCAGGCAGTaGAGACTTTGGACGGTGTTG +
Preference number: 4 (lower is better)
Translates to: KNAHTRNEFKPAETKLRQTKLRQ*RLWTVL
Trigger: CAACACCGTCCAAAGTCTCCACTGCCTGAGTTTTGT...CTGCCTGAGTTTTGTTTCGGCTGGTTTGAACTCATTTCGGGTGTGTGCATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp GAAGCATGTAGCTGCAGAGACAGTTCTCAGAGGCTAATCATCTACTGGTGGCTCTCACAATTGGTCATGTaGACAAAGTACTCACTCCTT +
Preference number: 4 (lower is better)
Translates to: EACSCRDSSQRLIIYWWLSQLVM*TKYSLL
Trigger: AAGGAGTGAGTACTTTGTCCACATGACCAATTGTGA...GAGCCACCAGTAGATGATTAGCCTCTGAGAACTGTCTCTGCAGCTACATGCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648181.1
ENST00000648891.1
CDS-3UTR CCA 90 bp GAAGTCAACATGCAAACAGAGGACACATACTTGTCACAAGTGAACTTGAGGTCACAGAAAAGCTGGCTTTaGGCAGTCCATTGCTACTCC +
Preference number: 4 (lower is better)
Translates to: EVNMQTEDTYLSQVNLRSQKSWL*AVHCYS
Trigger: GGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTG...TGACCTCAAGTTCACTTGTGACAAGTATGTGTCCTCTGTTTGCATGTTGACTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CCA 90 bp AGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAGAAGTTCAATGGTCAATGCAGAAAAGCTaGCTTTGGGCAGTCCATTGC +
Preference number: 4 (lower is better)
Translates to: RGHHTAITQLKPRTEVQWSMQKS*LWAVHC
Trigger: GCAATGGACTGCCCAAAGCCAGCTTTTCTGCATTGA...CCATTGAACTTCTGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CCA 90 bp AGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAGTCAAGACAAATTTCAGTCCTGGCTaGAGGCTAAGGGGCACCAGC +
Preference number: 4 (lower is better)
Translates to: RSFYSPCNFCTLLSIVKTNFSPG*RLRGTS
Trigger: GCTGGTGCCCCTTAGCCTCCAGCCAGGACTGAAATT...TGTCTTGACTATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR CCA 90 bp ATTGTCCAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCAATTTCAGTCCTGGCTaGAGGCTAAGGGGCACCAGC +
Preference number: 4 (lower is better)
Translates to: IVQLRSFYSPCNFCTLLSNFSPG*RLRGTS
Trigger: GCTGGTGCCCCTTAGCCTCCAGCCAGGACTGAAATT...GGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTGGACAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR CCA 90 bp ACTATCAAGATCAGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACACCATGTTGCACAGGCTaGTCTCAAATTCCTGACCTC +
Preference number: 4 (lower is better)
Translates to: TIKIRGHHTAITQLKPRTPCCTG*SQIPDL
Trigger: GAGGTCAGGAATTTGAGACCAGCCTGTGCAACATGG...TGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCTGATCTTGATAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644342.1
ENST00000646800.1
CDS-3UTR CCA 90 bp TCAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTCCTATAATTGCACTGGGAGGCTAATCATCTACTaGTGGCTCCAAATAGCTCCT +
Preference number: 4 (lower is better)
Translates to: SEANHLLVAPNSSYNCTGRLIIY*WLQIAP
Trigger: AGGAGCTATTTGGAGCCACCAGTAGATGATTAGCCT...CCCAGTGCAATTATAGGAGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648181.1
ENST00000648891.1
3UTR CAA 72 bp CAGACTGGATGGTGTAAGAACCTAATAATGCTAAGGTaGCAAAGGAACAGGGCAGACGTCCTGCAACTATGT +
Preference number: 4 (lower is better)
Translates to: QTGWCKNLIMLR*QRNRADVLQLC
Trigger: ACATAGTTGCAGGACGTCTGCCCTGTTCCTTTGCAACCTTAGCATTATTAGGTTCTTACACCATCCAGTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643155.1
CDS-3UTR TCA 90 bp CTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGCTTCTGTTGGTGCTGTaGATTTTCGGCCTCAGTCAC +
Preference number: 4 (lower is better)
Translates to: LESLKSDYGRLASLSFCWLLLVL*IFGLSH
Trigger: GTGACTGAGGCCGAAAATTCACAGCACCAACAGAAG...CCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp GAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGTTTCAAGATTCCTCCTGCTaGGGTTCTTGTTGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: ESLKSDYGRLASLSFCWFQDSSC*GSCWPE
Trigger: CTCAGGCCAACAAGAACCTCAGCAGGAGGAATCTTG...AAACCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp AGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAGTCAAGACACAAGATTCCTCCTGCTaGGGTTCTTGTTGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: RSFYSPCNFCTLLSIVKTQDSSC*GSCWPE
Trigger: CTCAGGCCAACAAGAACCTCAGCAGGAGGAATCTTG...TGTCTTGACTATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000646800.1
CDS-3UTR TCA 90 bp TCCATTAGAGCTTTTGGCCCAAAGTGCCTATTTTTCTGTGAGATTTGGTCTCCTAAGTCCTCTGCTTTCTaGTGTCCGCTCCTTGTTCTT +
Preference number: 4 (lower is better)
Translates to: SIRAFGPKCLFFCEIWSPKSSAF*CPLLVL
Trigger: AAGAACAAGGAGCGGACATCAGAAAGCAGAGGACTT...AGGAGACCAAATCTCACAGAAAAATAGGCACTTTGGGCCAAAAGCTCTAATGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp AAAGTAGAGGTGGCACTTTTTGAGAGACTTGTGATCCTCAGGGATTGGAATAGAAAGTCCTCTGCTTTCTaGTGTCCGCTCCTTGTTCTT +
Preference number: 4 (lower is better)
Translates to: KVEVALFERLVILRDWNRKSSAF*CPLLVL
Trigger: AAGAACAAGGAGCGGACATCAGAAAGCAGAGGACTT...TCTATTCCAATCCCTGAGGATCACAAGTCTCTCAAAAAGTGCCACCTCTACTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000646800.1
CDS-3UTR TCA 90 bp TTAGGGGCCTCCTTGGTTTACTATATAATTGTGGGGAACCAGTCCAGATATTTCAAGTCCTCTGCTTTCTaGTGTCCGCTCCTTGTTCTT +
Preference number: 4 (lower is better)
Translates to: LGASLVYYIIVGNQSRYFKSSAF*CPLLVL
Trigger: AAGAACAAGGAGCGGACATCAGAAAGCAGAGGACTT...GAAATATCTGGACTGGTTCCCCACAATTATATAGTAAACCAAGGAGGCCCCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000645184.1
ENST00000648181.1
CDS-3UTR TCA 90 bp AGAAGTCAACATGCAAACAGAGGACACATACTTGTCACAAGTGAACTTGAGGTCAAGTCCTCTGCTTTCTaGTGTCCGCTCCTTGTTCTT +
Preference number: 4 (lower is better)
Translates to: RSQHANRGHILVTSELEVKSSAF*CPLLVL
Trigger: AAGAACAAGGAGCGGACATCAGAAAGCAGAGGACTT...GACCTCAAGTTCACTTGTGACAAGTATGTGTCCTCTGTTTGCATGTTGACTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp GAAGTCAACATGCAAACAGAGGACACATACTTGTCACAAGTGAACTTGAGGTCAAAGTCCTCTGCTTTCTaGTGTCCGCTCCTTGTTCTT +
Preference number: 4 (lower is better)
Translates to: EVNMQTEDTYLSQVNLRSKSSAF*CPLLVL
Trigger: AAGAACAAGGAGCGGACATCAGAAAGCAGAGGACTT...TGACCTCAAGTTCACTTGTGACAAGTATGTGTCCTCTGTTTGCATGTTGACTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp CTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGAAGATGGGTCTGTTTTaGGTTCCGGTTCAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: LESLKSDYGRLASLSFCWKMGLF*VPVQEL
Trigger: CAGCTCCTGAACCGGAACTCAAAACAGACCCATCTT...CCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp TTGGATCCTAGCGCAAGAAATTTGCTTTTGGGAATGGTGTCTGTAGATGTCAATAAGATGGGTCTGTTTTaGGTTCCGGTTCAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: LDPSARNLLLGMVSVDVNKMGLF*VPVQEL
Trigger: CAGCTCCTGAACCGGAACTCAAAACAGACCCATCTT...ATTGACATCTACAGACACCATTCCCAAAAGCAAATTTCTTGCGCTAGGATCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
CDS-3UTR TCA 90 bp TTAAACTTCAATGCAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTAATCTGGATCTTCTCTaGGTTCTTCCTGAGCAGGCT +
Preference number: 4 (lower is better)
Translates to: LNFNAEKLALGSPLLLLCNLDLL*VLPEQA
Trigger: AGCCTGCTCAGGAAGAACTCAGAGAAGATCCAGATT...ACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTGCATTGAAGTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp AGAAGTCAACATGCAAACAGAGGACACATACTTGTCACAAGTGAACTTGAGGTCAATCTGGATCTTCTCTaGGTTCTTCCTGAGCAGGCT +
Preference number: 4 (lower is better)
Translates to: RSQHANRGHILVTSELEVNLDLL*VLPEQA
Trigger: AGCCTGCTCAGGAAGAACTCAGAGAAGATCCAGATT...GACCTCAAGTTCACTTGTGACAAGTATGTGTCCTCTGTTTGCATGTTGACTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp AAAGTAGAGGTGGCACTTTTTGAGAGACTTGTGATCCTCAGGGATTGGAATAGAAATCTGGATCTTCTCTaGGTTCTTCCTGAGCAGGCT +
Preference number: 4 (lower is better)
Translates to: KVEVALFERLVILRDWNRNLDLL*VLPEQA
Trigger: AGCCTGCTCAGGAAGAACTCAGAGAAGATCCAGATT...TCTATTCCAATCCCTGAGGATCACAAGTCTCTCAAAAAGTGCCACCTCTACTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000646800.1
CDS-3UTR TCA 90 bp GGGCTCTTTCCCTCCCTCCTGTTGTTCATGTCTCACATGGGTACCAAAAGAAAACTTCTTCCAAAAGATTaGGATGCTCACATACTCGTT +
Preference number: 4 (lower is better)
Translates to: GLFPSLLLFMSHMGTKRKLLPKD*DAHILV
Trigger: AACGAGTATGTGAGCATCTCAATCTTTTGGAAGAAG...TTTTCTTTTGGTACCCATGTGAGACATGAACAACAGGAGGGAGGGAAAGAGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp AGGCCGTGGTTCTGGTACAGACTCCATGAAGTTCTTTTTCAGCTCACTGATGCTCTTCTTCCAAAAGATTaGGATGCTCACATACTCGTT +
Preference number: 4 (lower is better)
Translates to: RPWFWYRLHEVLFQLTDALLPKD*DAHILV
Trigger: AACGAGTATGTGAGCATCTCAATCTTTTGGAAGAAG...AGCATCAGTGAGCTGAAAAAGAACTTCATGGAGTCTGTACCAGAACCACGGCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
CDS-3UTR TCA 90 bp TCTATACACCAGGCAGGAAAAAGTTGTCTGTCCCTGTACAGCTCAGAAATACTCTCAAGTTCCTTGGTCTaGTTCGGGGCCAGTTTAAAA +
Preference number: 4 (lower is better)
Translates to: SIHQAGKSCLSLYSSEILSSSLV*FGASLK
Trigger: TTTTAAACTGGCCCCGAATCAGACCAAGGAACTTGA...GAGTATTTCTGAGCTGTACAGGGACAGACAACTTTTTCCTGCCTGGTGTATAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp CAGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAGAAGTTCAATGTCAAGTTCCTTGGTCTaGTTCGGGGCCAGTTTAAAA +
Preference number: 4 (lower is better)
Translates to: QRASYSNNTVEAKDRSSMSSSLV*FGASLK
Trigger: TTTTAAACTGGCCCCGAATCAGACCAAGGAACTTGA...CATTGAACTTCTGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp CAGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAGAAGTTCAATGAGTCATGGACCTGTATaGCTTATGCAGTTCCATGAC +
Preference number: 4 (lower is better)
Translates to: QRASYSNNTVEAKDRSSMSHGPV*LMQFHD
Trigger: GTCATGGAACTGCATAAGTCATACAGGTCCATGACT...CATTGAACTTCTGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp CTCTTTCCCTCCCTCCTGTTGTTCATGTCTCACATGGGTACCAAAAGAAAAATGAGTCATGGACCTGTATaGCTTATGCAGTTCCATGAC +
Preference number: 4 (lower is better)
Translates to: LFPSLLLFMSHMGTKRKMSHGPV*LMQFHD
Trigger: GTCATGGAACTGCATAAGTCATACAGGTCCATGACT...CATTTTTCTTTTGGTACCCATGTGAGACATGAACAACAGGAGGGAGGGAAAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp GGCAGGAAAAAGTTGTCTGTCCCTGTACAGCTCAGAAATACTCATAAAAAGGCCAGTCATGGACCTGTATaGCTTATGCAGTTCCATGAC +
Preference number: 4 (lower is better)
Translates to: GRKKLSVPVQLRNTHKKASHGPV*LMQFHD
Trigger: GTCATGGAACTGCATAAGTCATACAGGTCCATGACT...GGCCTTTTTATGAGTATTTCTGAGCTGTACAGGGACAGACAACTTTTTCCTGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp AATCTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCAACTCCAAGTCAGCCTaGGCTGGAGTCATGGACCTG +
Preference number: 4 (lower is better)
Translates to: NLESLKSDYGRLASLSFCNSKSA*AGVMDL
Trigger: CAGGTCCATGACTCCAGCTCAGGCTGACTTGGAGTT...GCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp AAAAATGCACACACCCGAAATGAGTTCAAACCAGCCGAAACAAAACTCAGGCAGAGCAGACACCTAGGATaGTATCTACTCCTTCCAAGT +
Preference number: 4 (lower is better)
Translates to: KNAHTRNEFKPAETKLRQSRHLG*YLLLPS
Trigger: ACTTGGAAGGAGTAGATATCATCCTAGGTGTCTGCT...CTGCCTGAGTTTTGTTTCGGCTGGTTTGAACTCATTTCGGGTGTGTGCATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp AGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAGAAGTTCAATGGAGCAGACACCTAGGATaGTATCTACTCCTTCCAAGT +
Preference number: 4 (lower is better)
Translates to: RGHHTAITQLKPRTEVQWSRHLG*YLLLPS
Trigger: ACTTGGAAGGAGTAGATATCATCCTAGGTGTCTGCT...CCATTGAACTTCTGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp CAGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAGAAGTTCAATGAGCAGACACCTAGGATaGTATCTACTCCTTCCAAGT +
Preference number: 4 (lower is better)
Translates to: QRASYSNNTVEAKDRSSMSRHLG*YLLLPS
Trigger: ACTTGGAAGGAGTAGATATCATCCTAGGTGTCTGCT...CATTGAACTTCTGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp GGCAGGAAAAAGTTGTCTGTCCCTGTACAGCTCAGAAATACTCATAAAAAGGCCAGCAGACACCTAGGATaGTATCTACTCCTTCCAAGT +
Preference number: 4 (lower is better)
Translates to: GRKKLSVPVQLRNTHKKASRHLG*YLLLPS
Trigger: ACTTGGAAGGAGTAGATATCATCCTAGGTGTCTGCT...GGCCTTTTTATGAGTATTTCTGAGCTGTACAGGGACAGACAACTTTTTCCTGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp CTCTTTCCCTCCCTCCTGTTGTTCATGTCTCACATGGGTACCAAAAGAAAAATGAGCAGACACCTAGGATaGTATCTACTCCTTCCAAGT +
Preference number: 4 (lower is better)
Translates to: LFPSLLLFMSHMGTKRKMSRHLG*YLLLPS
Trigger: ACTTGGAAGGAGTAGATATCATCCTAGGTGTCTGCT...CATTTTTCTTTTGGTACCCATGTGAGACATGAACAACAGGAGGGAGGGAAAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp TCAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTCCTATAATTGCACTGGGGGTAACTGGGAAGTTTaGATCCGATGGTACTTTCAT +
Preference number: 4 (lower is better)
Translates to: SEANHLLVAPNSSYNCTGGNWEV*IRWYFH
Trigger: ATGAAAGTACCATCGGATTCAAACTTCCCAGTTACC...CCCAGTGCAATTATAGGAGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648181.1
ENST00000648891.1
CDS-3UTR TCA 90 bp CAATGCAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAAATCTGAAAAACGTGTaGTGTTCTACACAGACTTTC +
Preference number: 4 (lower is better)
Translates to: QCRKAGFGQSIATPLYPTNLKNV*CSTQTF
Trigger: GAAAGTCTGTGTAGAACATCACACGTTTTTCAGATT...TGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTGCATTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp CTCTTTCCCTCCCTCCTGTTGTTCATGTCTCACATGGGTACCAAAAGAAAAATGCTGGTACAGACTCCATaGAGTTCTTTTTCAGCTCAC +
Preference number: 4 (lower is better)
Translates to: LFPSLLLFMSHMGTKRKMLVQTP*SSFSAH
Trigger: GTGAGCTGAAAAAGAACTTCATGGAGTCTGTACCAG...CATTTTTCTTTTGGTACCCATGTGAGACATGAACAACAGGAGGGAGGGAAAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR TCA 90 bp GGCAGGAAAAAGTTGTCTGTCCCTGTACAGCTCAGAAATACTCATAAAAAGGCCCTGGTACAGACTCCATaGAGTTCTTTTTCAGCTCAC +
Preference number: 4 (lower is better)
Translates to: GRKKLSVPVQLRNTHKKALVQTP*SSFSAH
Trigger: GTGAGCTGAAAAAGAACTTCATGGAGTCTGTACCAG...GGCCTTTTTATGAGTATTTCTGAGCTGTACAGGGACAGACAACTTTTTCCTGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp CTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGGTTCGGAAGGGTGAGTaGGTGGATAAGCGTTTATCC +
Preference number: 4 (lower is better)
Translates to: LESLKSDYGRLASLSFCWVRKGE*VDKRLS
Trigger: GGATAAACGCTTATCCACTCACTCACCCTTCCGAAC...CCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
CDS-3UTR TCA 90 bp GAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGTTTGGGCAGCCTCATAAGTaGTGGTCTTGGTCTCAGTGT +
Preference number: 4 (lower is better)
Translates to: ESLKSDYGRLASLSFCWFGQPHK*WSWSQC
Trigger: ACACTGAGACCAAGACCATCACTTATGAGGCTGCCC...AAACCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp AAAAATGCACACACCCGAAATGAGTTCAAACCAGCCGAAACAAAACTCAGGCAGGCTTGTACAAGGACCTaGTCATGGTCAATATCAGCA +
Preference number: 4 (lower is better)
Translates to: KNAHTRNEFKPAETKLRQACTRT*SWSISA
Trigger: TGCTGATATTGACCATGATCAGGTCCTTGTACAAGC...CTGCCTGAGTTTTGTTTCGGCTGGTTTGAACTCATTTCGGGTGTGTGCATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp GAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGTTTGCTCCTTTGCCTCCTTaGTGGCTTGTACAAGGACCT +
Preference number: 4 (lower is better)
Translates to: ESLKSDYGRLASLSFCWFAPLPP*WLVQGP
Trigger: AGGTCCTTGTACAAGCCATCAAGGAGGCAAAGGAGC...AAACCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp GGATCAATGAGATCTAGAAGAATCTCTTGGTATAAACTCCCAATAGAAACTGAAGCAGAGAGGCTAGGCTaGAGGGGTTACAAACCACCC +
Preference number: 4 (lower is better)
Translates to: GSMRSRRISWYKLPIETEAERLG*RGYKPP
Trigger: GGGTGGTTTGTAACCCCTTCAGCCTAGCCTCTCTGC...TTCAGTTTCTATTGGGAGTTTATACCAAGAGATTCTTCTAGATCTCATTGATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp GGATCAATGAGATCTAGAAGAATCTCTTGGTATAAACTCCCAATAGAAACTGAAGGGGGAGCACTTAGCTaGGCCACTGCTTCTGATGAG +
Preference number: 4 (lower is better)
Translates to: GSMRSRRISWYKLPIETEGGALS*ATASDE
Trigger: CTCATCAGAAGCAGTGGCTCAGCTAAGTGCTCCCCC...TTCAGTTTCTATTGGGAGTTTATACCAAGAGATTCTTCTAGATCTCATTGATCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp CAGATATCTGAAGCAACTTCCATGTCTTTGACCCAAAGAAGCTCCAAAAAGAAACAAGCCTTCAAAACCTaGCAGACCTCAGCTGGTGAG +
Preference number: 4 (lower is better)
Translates to: QISEATSMSLTQRSSKKKQAFKT*QTSAGE
Trigger: CTCACCAGCTGAGGTCTGTCAGGTTTTGAAGGCTTG...TTTCTTTTTGGAGCTTCTTTGGGTCAAAGACATGGAAGTTGCTTCAGATATCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp GAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGTTTCAAGCCTTCAAAACCTaGCAGACCTCAGCTGGTGAG +
Preference number: 4 (lower is better)
Translates to: ESLKSDYGRLASLSFCWFQAFKT*QTSAGE
Trigger: CTCACCAGCTGAGGTCTGTCAGGTTTTGAAGGCTTG...AAACCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp GGGCTCTTTCCCTCCCTCCTGTTGTTCATGTCTCACATGGGTACCAAAAGAAAACACTACATGTTCGTTTaGTGTAAGCTGCATTTCTTG +
Preference number: 4 (lower is better)
Translates to: GLFPSLLLFMSHMGTKRKHYMFV*CKLHFL
Trigger: CAAGAAATGCAGCTTACATCAAACGAACATGTAGTG...TTTTCTTTTGGTACCCATGTGAGACATGAACAACAGGAGGGAGGGAAAGAGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR TCA 90 bp GGATCAATGAGATCTAGAAGAATCTCTTGGTATAAACTCCCAATAGAAACTGAACGTTTAGGCCCCCGATaGACGGTCCTGTGCTGTGAA +
Preference number: 4 (lower is better)
Translates to: GSMRSRRISWYKLPIETERLGPR*TVLCCE
Trigger: TTCACAGCACAGGACCGTTCATCGGGGGCCTAAACG...TTCAGTTTCTATTGGGAGTTTATACCAAGAGATTCTTCTAGATCTCATTGATCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR TCA 90 bp CCCTTGTCATGTGGTGTCTTGTGGGGAGAACGGCTCCTAAAAGTCAATTCCTTGTTTTTGATCTCCTCTTaGCTCTTGTCTAAATCCTTC +
Preference number: 4 (lower is better)
Translates to: PLSCGVLWGERLLKVNSLFLISS*LLSKSF
Trigger: GAAGGATTTAGACAAGAGTCAAGAGGAGATCAAAAA...CAAGGAATTGACTTTTAGGAGCCGTTCTCCCCACAAGACACCACATGACAAGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000647103.1
CDS-3UTR TCA 90 bp AAAGTAGAGGTGGCACTTTTTGAGAGACTTGTGATCCTCAGGGATTGGAATAGAAGAGGTGGCACTTTTTaGGAGACTTGTGATCCTCAG +
Preference number: 4 (lower is better)
Translates to: KVEVALFERLVILRDWNRRGGTF*ETCDPQ
Trigger: CTGAGGATCACAAGTCTCTCAAAAAGTGCCACCTCT...TCTATTCCAATCCCTGAGGATCACAAGTCTCTCAAAAAGTGCCACCTCTACTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR TCA 90 bp TTAAACTTCAATGCAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTGAGCACCCTGTTTTCTaGTCACAGAAAGACCAACCA +
Preference number: 4 (lower is better)
Translates to: LNFNAEKLALGSPLLLLCEHPVF*SQKDQP
Trigger: TGGTTGGTCTTTCTGTGATCAGAAAACAGGGTGCTC...ACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTGCATTGAAGTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp GGCAGGAAAAAGTTGTCTGTCCCTGTACAGCTCAGAAATACTCATAAAAAGGCCATAGGTAGAGTAGTCTaGGAATTTCAGTCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: GRKKLSVPVQLRNTHKKAIGRVV*EFQSWL
Trigger: CAGCCAGGACTGAAATTCTCAGACTACTCTACCTAT...GGCCTTTTTATGAGTATTTCTGAGCTGTACAGGGACAGACAACTTTTTCCTGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp AGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAGAAGTTCAATGGATAGGTAGAGTAGTCTaGGAATTTCAGTCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: RGHHTAITQLKPRTEVQWIGRVV*EFQSWL
Trigger: CAGCCAGGACTGAAATTCTCAGACTACTCTACCTAT...CCATTGAACTTCTGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp GAAGTCAACATGCAAACAGAGGACACATACTTGTCACAAGTGAACTTGAGGTCAAACAGGTTAGGCATGTaGGTTGTCCTGAAGAGAGAG +
Preference number: 4 (lower is better)
Translates to: EVNMQTEDTYLSQVNLRSNRLGM*VVLKRE
Trigger: CTCTCTCTTCAGGACAACTCACATGCCTAACCTGTT...TGACCTCAAGTTCACTTGTGACAAGTATGTGTCCTCTGTTTGCATGTTGACTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp CAGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAGAAGTTCAATGTTGCACACCCCTAAGTaGTATGTATCAGGGAGAAAG +
Preference number: 4 (lower is better)
Translates to: QRASYSNNTVEAKDRSSMLHTPK*YVSGRK
Trigger: CTTTCTCCCTGATACATATCACTTAGGGGTGTGCAA...CATTGAACTTCTGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR GCA 90 bp AAAAATGCACACACCCGAAATGAGTTCAAACCAGCCGAAACAAAACTCAGGCAGTCTTCCTTCTGTTGGTaGTGTGAATTTTCGGCCTCA +
Preference number: 4 (lower is better)
Translates to: KNAHTRNEFKPAETKLRQSSFCW*CEFSAS
Trigger: TGAGGCCGAAAATTCACAGCACCAACAGAAGGAAGA...CTGCCTGAGTTTTGTTTCGGCTGGTTTGAACTCATTTCGGGTGTGTGCATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp AGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAGAAGTTCAATGGTCTTCCTTCTGTTGGTaGTGTGAATTTTCGGCCTCA +
Preference number: 4 (lower is better)
Translates to: RGHHTAITQLKPRTEVQWSSFCW*CEFSAS
Trigger: TGAGGCCGAAAATTCACAGCACCAACAGAAGGAAGA...CCATTGAACTTCTGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR GCA 90 bp GGCAGGAAAAAGTTGTCTGTCCCTGTACAGCTCAGAAATACTCATAAAAAGGCCTCTTCCTTCTGTTGGTaGTGTGAATTTTCGGCCTCA +
Preference number: 4 (lower is better)
Translates to: GRKKLSVPVQLRNTHKKASSFCW*CEFSAS
Trigger: TGAGGCCGAAAATTCACAGCACCAACAGAAGGAAGA...GGCCTTTTTATGAGTATTTCTGAGCTGTACAGGGACAGACAACTTTTTCCTGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR GCA 90 bp CTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGGTCGTGAAAGTCCTCTaGTTTCTGATGTCCGCTCCT +
Preference number: 4 (lower is better)
Translates to: LESLKSDYGRLASLSFCWVVKVL*FLMSAP
Trigger: AGGAGCGGACATCAGAAAGCAGAGGACTTTCACGAC...CCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp AGAAGTCAACATGCAAACAGAGGACACATACTTGTCACAAGTGAACTTGAGGTCCTGACTCTACTTCTTTaGCTTCTTCCTCGGACACCT +
Preference number: 4 (lower is better)
Translates to: RSQHANRGHILVTSELEVLTLLL*LLPRTP
Trigger: AGGTGTCCGAGGAAGAAGGCAAAGAAGTAGAGTCAG...GACCTCAAGTTCACTTGTGACAAGTATGTGTCCTCTGTTTGCATGTTGACTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR GCA 90 bp ACTATCAAGATCAGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACACTGACTCTACTTCTTTaGCTTCTTCCTCGGACACCT +
Preference number: 4 (lower is better)
Translates to: TIKIRGHHTAITQLKPRTLTLLL*LLPRTP
Trigger: AGGTGTCCGAGGAAGAAGGCAAAGAAGTAGAGTCAG...TGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCTGATCTTGATAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR GCA 90 bp GCCACATTCCTTGTCATTTGGGATGAAAGAAAGGCCCAGGATCAGACAGAAGTACCAACAAAGAAACCTTaGAGTGCATGTTCCTGTGTT +
Preference number: 4 (lower is better)
Translates to: ATFLVIWDERKAQDQTEVPTKKP*SACSCV
Trigger: AACACAGGAACATGCACTGCAAGGTTTCTTTGTTGG...TACTTCTGTCTGATCCTGGGCCTTTCTTTCATCCCAAATGACAAGGAATGTGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp GAAGCATGTAGCTGCAGAGACAGTTCTCAGAGGCTAATCATCTACTGGTGGCTCTCCAAAAGATTGAGATaGTCACATACTCGTTTAAGC +
Preference number: 4 (lower is better)
Translates to: EACSCRDSSQRLIIYWWLSKRLR*SHTRLS
Trigger: GCTTAAACGAGTATGTGAGCATCTCAATCTTTTGGA...GAGCCACCAGTAGATGATTAGCCTCTGAGAACTGTCTCTGCAGCTACATGCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648891.1
CDS-3UTR GCA 90 bp AATCTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCACAGGGCAGACGTCCTaGAACTATGTCCTGCCGAAG +
Preference number: 4 (lower is better)
Translates to: NLESLKSDYGRLASLSFCTGQTS*NYVLPK
Trigger: CTTCGGCAGGACATAGTTGCAGGACGTCTGCCCTGT...GCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp CAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTCCTATAATTGCACTGGGTGACCTGTATGACTTATaGAGTTCCATGACCTTCTCT +
Preference number: 4 (lower is better)
Translates to: QRLIIYWWLQIAPIIALGDLYDL*SSMTFS
Trigger: AGAGAAGGTCATGGAACTGCATAAGTCATACAGGTC...ACCCAGTGCAATTATAGGAGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648181.1
ENST00000648891.1
CDS-3UTR GCA 90 bp AAAGTAGAGGTGGCACTTTTTGAGAGACTTGTGATCCTCAGGGATTGGAATAGAATGGTACTTTCATACTaGTCTTGCTCTCCAGGCCGA +
Preference number: 4 (lower is better)
Translates to: KVEVALFERLVILRDWNRMVLSY*SCSPGR
Trigger: TCGGCCTGGAGAGCAAGAGCAGTATGAAAGTACCAT...TCTATTCCAATCCCTGAGGATCACAAGTCTCTCAAAAAGTGCCACCTCTACTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR GCA 90 bp AAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAATACATACTCTAGCGCAAGAAATTTaGTTTTGGGAATGGTGTCTG +
Preference number: 4 (lower is better)
Translates to: KAGFGQSIATPLYPTIHTLAQEI*FWEWCL
Trigger: CAGACACCATTCCCAAAAGCAAATTTCTTGCGCTAG...AGTATGTATTGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR GCA 90 bp AATCTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCGGACGCCCGTTTACTTaGTGTACGCTCGAAGTGTGG +
Preference number: 4 (lower is better)
Translates to: NLESLKSDYGRLASLSFCGRPFT*CTLEVW
Trigger: CCACACTTCGAGCGTACAGCAAGTAAACGGGCGTCC...GCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp CTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGTTTGAGTTGTGGTGGTaGTGCTTGGGGTCTCAGATG +
Preference number: 4 (lower is better)
Translates to: LESLKSDYGRLASLSFCWFELWW*CLGSQM
Trigger: CATCTGAGACCCCAAGCAGCACCACCACAACTCAAA...CCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp AATCTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCCTGAGGCAAGAGAACTaGTTGAACCCAGGAGGCGGA +
Preference number: 4 (lower is better)
Translates to: NLESLKSDYGRLASLSFCLRQEN*LNPGGG
Trigger: TCCGCCTCCTGGGTTCAAGCAGTTCTCTTGCCTCAG...GCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp TCCATTAGAGCTTTTGGCCCAAAGTGCCTATTTTTCTGTGAGATTTGGTCTCCTTTTAGACATTTCTCTTaGTCACTGCCCTTGAGCCCC +
Preference number: 4 (lower is better)
Translates to: SIRAFGPKCLFFCEIWSPFRHFS*SLPLSP
Trigger: GGGGCTCAAGGGCAGTGAGCAAGAGAAATGTCTAAA...AGGAGACCAAATCTCACAGAAAAATAGGCACTTTGGGCCAAAAGCTCTAATGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp AAAAATGCACACACCCGAAATGAGTTCAAACCAGCCGAAACAAAACTCAGGCAGACCTTTCAGACCCTCTaGCCACAGCCTATAATTTTG +
Preference number: 4 (lower is better)
Translates to: KNAHTRNEFKPAETKLRQTFQTL*PQPIIL
Trigger: CAAAATTATAGGCTGTGGGCAGAGGGTCTGAAAGGT...CTGCCTGAGTTTTGTTTCGGCTGGTTTGAACTCATTTCGGGTGTGTGCATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp AAAAATGCACACACCCGAAATGAGTTCAAACCAGCCGAAACAAAACTCAGGCAGATCAGGCAGTGGGCATaGACTACATGTTCGTTTGAT +
Preference number: 4 (lower is better)
Translates to: KNAHTRNEFKPAETKLRQIRQWA*TTCSFD
Trigger: ATCAAACGAACATGTAGTGCATGCCCACTGCCTGAT...CTGCCTGAGTTTTGTTTCGGCTGGTTTGAACTCATTTCGGGTGTGTGCATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR GCA 90 bp GTTGGGAGAAGCAGCTTTAGACATTTCTCTTGCTCACTGCCCTTGAGCCCCAGTAGCAGACTTGATTATTaGCTGTGTAGTCTAAAGATT +
Preference number: 4 (lower is better)
Translates to: VGRSSFRHFSCSLPLSPSSRLDY*LCSLKI
Trigger: AATCTTTAGACTACACAGGCAATAATCAAGTCTGCT...ACTGGGGCTCAAGGGCAGTGAGCAAGAGAAATGTCTAAAGCTGCTTCTCCCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR GCA 90 bp CAATGCAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAGGAAGATTACCAACCTaGCATATGCTTAATTCTGAT +
Preference number: 4 (lower is better)
Translates to: QCRKAGFGQSIATPLYPTGRLPT*HMLNSD
Trigger: ATCAGAATTAAGCATATGGCAGGTTGGTAATCTTCC...TGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTGCATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR GCA 90 bp CAATGCAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAAGTTTTTATTCCCCCTaGAATTTCTGTACTCTGCTA +
Preference number: 4 (lower is better)
Translates to: QCRKAGFGQSIATPLYPTSFYSP*NFCTLL
Trigger: TAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACT...TGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTGCATTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR GCA 90 bp GAAGCATGTAGCTGCAGAGACAGTTCTCAGAGGCTAATCATCTACTGGTGGCTCTCTGTGTTTCTGCACTaGTTAATGAATGAAGATCCA +
Preference number: 4 (lower is better)
Translates to: EACSCRDSSQRLIIYWWLSVFLH*LMNEDP
Trigger: TGGATCTTCATTCATTAAGCAGTGCAGAAACACAGA...GAGCCACCAGTAGATGATTAGCCTCTGAGAACTGTCTCTGCAGCTACATGCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648181.1
CDS-3UTR CCA 90 bp CAGCTGACAAGAGTCCTTGGAGGATTTCCCGAAGAATTCCATGGACCCTGTCAGTCTCTTCATCAAGACTaGTTCCAAATTCTATCTCTT +
Preference number: 4 (lower is better)
Translates to: QLTRVLGGFPEEFHGPCQSLHQD*FQILSL
Trigger: AAGAGATAGAATTTGGAACCAGTCTTGATGAAGAGA...CTGACAGGGTCCATGGAATTCTTCGGGAAATCCTCCAAGGACTCTTGTCAGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp CAGAGACAGTTCTCAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTCCTATATGAAGATCCAAAGATaGGTCTGTTTTGAGTTCCGG +
Preference number: 4 (lower is better)
Translates to: QRQFSEANHLLVAPNSSYMKIQR*VCFEFR
Trigger: CCGGAACTCAAAACAGACCCATCTTTGGATCTTCAT...ATAGGAGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTGAGAACTGTCTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648181.1
ENST00000648891.1
CDS-3UTR CCA 90 bp GAAGCATGTAGCTGCAGAGACAGTTCTCAGAGGCTAATCATCTACTGGTGGCTCTTGCGTTATCCCAAATaGCTAGACCAAAATAGTCTT +
Preference number: 4 (lower is better)
Translates to: EACSCRDSSQRLIIYWWLLRYPK*LDQNSL
Trigger: AAGACTATTTTGGTCTAGCCATTTGGGATAACGCAA...GAGCCACCAGTAGATGATTAGCCTCTGAGAACTGTCTCTGCAGCTACATGCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648891.1
CDS-3UTR CCA 90 bp CAATGCAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACATTGCGTTATCCCAAATaGCTAGACCAAAATAGTCTT +
Preference number: 4 (lower is better)
Translates to: QCRKAGFGQSIATPLYPTLRYPK*LDQNSL
Trigger: AAGACTATTTTGGTCTAGCCATTTGGGATAACGCAA...TGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTGCATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CCA 90 bp AGGCCGTGGTTCTGGTACAGACTCCATGAAGTTCTTTTTCAGCTCACTGATGCTCCAGTTCAGACTGGATaGTGTAAGAACCTAATAATG +
Preference number: 4 (lower is better)
Translates to: RPWFWYRLHEVLFQLTDAPVQTG*CKNLIM
Trigger: CATTATTAGGTTCTTACACCATCCAGTCTGAACTGG...AGCATCAGTGAGCTGAAAAAGAACTTCATGGAGTCTGTACCAGAACCACGGCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
CDS-3UTR CCA 90 bp CAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAATACACCAGTTCAGACTGGATaGTGTAAGAACCTAATAATG +
Preference number: 4 (lower is better)
Translates to: QKSWLWAVHCYSFVPHNTPVQTG*CKNLIM
Trigger: CATTATTAGGTTCTTACACCATCCAGTCTGAACTGG...TGTATTGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CCA 90 bp AGCTGCAGAGACAGTTCTCAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTCCAGTTCAGACTGGATaGTGTAAGAACCTAATAATG +
Preference number: 4 (lower is better)
Translates to: SCRDSSQRLIIYWWLQIAPVQTG*CKNLIM
Trigger: CATTATTAGGTTCTTACACCATCCAGTCTGAACTGG...AGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTGAGAACTGTCTCTGCAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648181.1
ENST00000648891.1
CDS-3UTR CCA 90 bp CAATGCAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACACACTGTATCGAAATTTaGATCCTAGCGCAAGAAATT +
Preference number: 4 (lower is better)
Translates to: QCRKAGFGQSIATPLYPTHCIEI*ILAQEI
Trigger: AATTTCTTGCGCTAGGATCCAAATTTCGATACAGTG...TGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTGCATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CCA 90 bp CTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGCTCAGCTTGCTCAGGTaGCTCGTCTTCCTTTTTCAC +
Preference number: 4 (lower is better)
Translates to: LESLKSDYGRLASLSFCWLSLLR*LVFLFH
Trigger: GTGAAAAAGGAAGACGAGCCACCTGAGCAAGCTGAG...CCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp TTGGATCCTAGCGCAAGAAATTTGCTTTTGGGAATGGTGTCTGTAGATGTCAATCTCAGCTTGCTCAGGTaGCTCGTCTTCCTTTTTCAC +
Preference number: 4 (lower is better)
Translates to: LDPSARNLLLGMVSVDVNLSLLR*LVFLFH
Trigger: GTGAAAAAGGAAGACGAGCCACCTGAGCAAGCTGAG...ATTGACATCTACAGACACCATTCCCAAAAGCAAATTTCTTGCGCTAGGATCCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
CDS-3UTR CCA 90 bp AAAGTAGAGGTGGCACTTTTTGAGAGACTTGTGATCCTCAGGGATTGGAATAGAGCAAGCTTCTGTGTTTaGTCACCATTTGAGGTGGGT +
Preference number: 4 (lower is better)
Translates to: KVEVALFERLVILRDWNRASFCV*SPFEVG
Trigger: ACCCACCTCAAATGGTGACCAAACACAGAAGCTTGC...TCTATTCCAATCCCTGAGGATCACAAGTCTCTCAAAAAGTGCCACCTCTACTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644600.1
ENST00000646800.1
CDS-3UTR CCA 90 bp AGAAGTCAACATGCAAACAGAGGACACATACTTGTCACAAGTGAACTTGAGGTCACTAGGCCGTGGTTCTaGTACAGACTCCATGAAGTT +
Preference number: 4 (lower is better)
Translates to: RSQHANRGHILVTSELEVTRPWF*YRLHEV
Trigger: AACTTCATGGAGTCTGTACCAGAACCACGGCCTAGT...GACCTCAAGTTCACTTGTGACAAGTATGTGTCCTCTGTTTGCATGTTGACTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CCA 90 bp CTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGCCATTCACTAGGCCGTaGTTCTGGTACAGACTCCAT +
Preference number: 4 (lower is better)
Translates to: LESLKSDYGRLASLSFCWPFTRP*FWYRLH
Trigger: ATGGAGTCTGTACCAGAACCACGGCCTAGTGAATGG...CCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
CDS-3UTR CCA 90 bp TTGGATCCTAGCGCAAGAAATTTGCTTTTGGGAATGGTGTCTGTAGATGTCAATCCATTCACTAGGCCGTaGTTCTGGTACAGACTCCAT +
Preference number: 4 (lower is better)
Translates to: LDPSARNLLLGMVSVDVNPFTRP*FWYRLH
Trigger: ATGGAGTCTGTACCAGAACCACGGCCTAGTGAATGG...ATTGACATCTACAGACACCATTCCCAAAAGCAAATTTCTTGCGCTAGGATCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
CDS-3UTR CCA 90 bp CTCTTTCCCTCCCTCCTGTTGTTCATGTCTCACATGGGTACCAAAAGAAAAATGGGAAGGGTGAGTGAGTaGATAAGCGTTTATCCCATT +
Preference number: 4 (lower is better)
Translates to: LFPSLLLFMSHMGTKRKMGRVSE*ISVYPI
Trigger: AATGGGATAAACGCTTATCCACTCACTCACCCTTCC...CATTTTTCTTTTGGTACCCATGTGAGACATGAACAACAGGAGGGAGGGAAAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR CCA 90 bp AGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAGAAGTTCAATGGGGAAGGGTGAGTGAGTaGATAAGCGTTTATCCCATT +
Preference number: 4 (lower is better)
Translates to: RGHHTAITQLKPRTEVQWGRVSE*ISVYPI
Trigger: AATGGGATAAACGCTTATCCACTCACTCACCCTTCC...CCATTGAACTTCTGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CCA 90 bp CTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGTGTGGTGGTGCTGCTTaGGGTCTCAGATGTGATAGT +
Preference number: 4 (lower is better)
Translates to: LESLKSDYGRLASLSFCWCGGAA*GLRCDS
Trigger: ACTATCACATCTGAGACCCCAAGCAGCACCACCACA...CCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp CAGATATCTGAAGCAACTTCCATGTCTTTGACCCAAAGAAGCTCCAAAAAGAAAGGAGAAGGGCAGAGTTaGGGTAGGTTAGTTCCTGAG +
Preference number: 4 (lower is better)
Translates to: QISEATSMSLTQRSSKKKGEGQS*GRLVPE
Trigger: CTCAGGAACTAACCTACCCCAACTCTGCCCTTCTCC...TTTCTTTTTGGAGCTTCTTTGGGTCAAAGACATGGAAGTTGCTTCAGATATCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp GAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGTTTCTGGTTTCTCTTGGATaGGAGAAGGGCAGAGTTGGG +
Preference number: 4 (lower is better)
Translates to: ESLKSDYGRLASLSFCWFLVSLG*EKGRVG
Trigger: CCCAACTCTGCCCTTCTCCCATCCAAGAGAAACCAG...AAACCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp GGATCAATGAGATCTAGAAGAATCTCTTGGTATAAACTCCCAATAGAAACTGAATCTTTCCGAGGTCTGTaGATCAGGGCTGGTGCCCTC +
Preference number: 4 (lower is better)
Translates to: GSMRSRRISWYKLPIETESFRGL*IRAGAL
Trigger: GAGGGCACCAGCCCTGATCCACAGACCTCGGAAAGA...TTCAGTTTCTATTGGGAGTTTATACCAAGAGATTCTTCTAGATCTCATTGATCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp GCCACATTCCTTGTCATTTGGGATGAAAGAAAGGCCCAGGATCAGACAGAAGTAACATTCCTTGTCATTTaGGATGAAAGAAAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: ATFLVIWDERKAQDQTEVTFLVI*DERKAQ
Trigger: CTGGGCCTTTCTTTCATCCCAAATGACAAGGAATGT...TACTTCTGTCTGATCCTGGGCCTTTCTTTCATCCCAAATGACAAGGAATGTGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp CTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGATACCCCTTGTCATGTaGTGTCTTGTGGGGAGAACG +
Preference number: 4 (lower is better)
Translates to: LESLKSDYGRLASLSFCWIPLVM*CLVGRT
Trigger: CGTTCTCCCCACAAGACACCACATGACAAGGGGTAT...CCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp CAGATATCTGAAGCAACTTCCATGTCTTTGACCCAAAGAAGCTCCAAAAAGAAAAAAATTTGCTGGGCGTaGTGGTGTGCGCCTGTCATC +
Preference number: 4 (lower is better)
Translates to: QISEATSMSLTQRSSKKKKICWA*WCAPVI
Trigger: GATGACAGGCGCACACCACCACGCCCAGCAAATTTT...TTTCTTTTTGGAGCTTCTTTGGGTCAAAGACATGGAAGTTGCTTCAGATATCTG
44% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp TCCATTAGAGCTTTTGGCCCAAAGTGCCTATTTTTCTGTGAGATTTGGTCTCCTACAAAACTCAGGCAGTaGAGACTTTGGACGGTGTTG +
Preference number: 4 (lower is better)
Translates to: SIRAFGPKCLFFCEIWSPTKLRQ*RLWTVL
Trigger: CAACACCGTCCAAAGTCTCCACTGCCTGAGTTTTGT...AGGAGACCAAATCTCACAGAAAAATAGGCACTTTGGGCCAAAAGCTCTAATGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp CCCTTGTCATGTGGTGTCTTGTGGGGAGAACGGCTCCTAAAAGTCAATTCCTTGTGTTCATGTCTCACATaGGTACCAAAAGAAAAATGC +
Preference number: 4 (lower is better)
Translates to: PLSCGVLWGERLLKVNSLCSCLT*VPKEKC
Trigger: GCATTTTTCTTTTGGTACCCATGTGAGACATGAACA...CAAGGAATTGACTTTTAGGAGCCGTTCTCCCCACAAGACACCACATGACAAGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp GAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGTTTAAAGGGGAAGAGGCCTaGAAGGACACCCATCTTGCT +
Preference number: 4 (lower is better)
Translates to: ESLKSDYGRLASLSFCWFKGEEA*KDTHLA
Trigger: AGCAAGATGGGTGTCCTTCCAGGCCTCTTCCCCTTT...AAACCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR CCA 90 bp CAGATATCTGAAGCAACTTCCATGTCTTTGACCCAAAGAAGCTCCAAAAAGAAAAAAGGGGAAGAGGCCTaGAAGGACACCCATCTTGCT +
Preference number: 4 (lower is better)
Translates to: QISEATSMSLTQRSSKKKKGEEA*KDTHLA
Trigger: AGCAAGATGGGTGTCCTTCCAGGCCTCTTCCCCTTT...TTTCTTTTTGGAGCTTCTTTGGGTCAAAGACATGGAAGTTGCTTCAGATATCTG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR CCA 90 bp GAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGTTTAACTGTTGCCAGAGATaGAGGAAAGGGGAAGAGGCC +
Preference number: 4 (lower is better)
Translates to: ESLKSDYGRLASLSFCWFNCCQR*RKGEEA
Trigger: GGCCTCTTCCCCTTTCCTCCATCTCTGGCAACAGTT...AAACCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR CCA 90 bp GGGCTCTTTCCCTCCCTCCTGTTGTTCATGTCTCACATGGGTACCAAAAGAAAACTCACCATTTCTACCTaGACAGAGTCTGTTTTTCTT +
Preference number: 4 (lower is better)
Translates to: GLFPSLLLFMSHMGTKRKLTIST*TESVFL
Trigger: AAGAAAAACAGACTCTGTCCAGGTAGAAATGGTGAG...TTTTCTTTTGGTACCCATGTGAGACATGAACAACAGGAGGGAGGGAAAGAGCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR CCA 90 bp CAGATATCTGAAGCAACTTCCATGTCTTTGACCCAAAGAAGCTCCAAAAAGAAACACCGCAGTGGCACATaGAAGCAAATGACAGCAGTG +
Preference number: 4 (lower is better)
Translates to: QISEATSMSLTQRSSKKKHRSGT*KQMTAV
Trigger: CACTGCTGTCATTTGCTTCCATGTGCCACTGCGGTG...TTTCTTTTTGGAGCTTCTTTGGGTCAAAGACATGGAAGTTGCTTCAGATATCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373798.5
CDS-3UTR CCA 90 bp AGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAGAAGTTCAATGGGTGATCCTCAGGGATTaGAATAGAAACCTTGGGAAG +
Preference number: 4 (lower is better)
Translates to: RGHHTAITQLKPRTEVQWVILRD*NRNLGK
Trigger: CTTCCCAAGGTTTCTATTCCAATCCCTGAGGATCAC...CCATTGAACTTCTGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CCA 90 bp TTAAACTTCAATGCAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTTCAATGCAGAAAAGCTaGCTTTGGGCAGTCCATTGC +
Preference number: 4 (lower is better)
Translates to: LNFNAEKLALGSPLLLLCSMQKS*LWAVHC
Trigger: GCAATGGACTGCCCAAAGCCAGCTTTTCTGCATTGA...ACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTGCATTGAAGTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CCA 90 bp ATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAGTCAAAATTTCAGTCCTGGCTaGAGGCTAAGGGGCACCAGC +
Preference number: 4 (lower is better)
Translates to: IEKFLFPLQFLYSAIHSQNFSPG*RLRGTS
Trigger: GCTGGTGCCCCTTAGCCTCCAGCCAGGACTGAAATT...TTGACTATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR CCA 90 bp AAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAATACATACTAGTTCAAGGAATCACTaGCTTTCCCCTTGCTATGTT +
Preference number: 4 (lower is better)
Translates to: KAGFGQSIATPLYPTIHTSSRNH*LSPCYV
Trigger: AACATAGCAAGGGGAAAGCCAGTGATTCCTTGAACT...AGTATGTATTGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR CCA 90 bp CAATGCAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACACTCAAAAATGATACTTaGGGATGTGCAAAGGATTTG +
Preference number: 4 (lower is better)
Translates to: QCRKAGFGQSIATPLYPTLKNDT*GCAKDL
Trigger: CAAATCCTTTGCACATCCCCAAGTATCATTTTTGAG...TGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTGCATTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR CCA 90 bp AATCTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCGCTTCCATGCTTCTGTaGGCTCTGGCTCAGCTTGCT +
Preference number: 4 (lower is better)
Translates to: NLESLKSDYGRLASLSFCASMLL*ALAQLA
Trigger: AGCAAGCTGAGCCAGAGCCCACAGAAGCATGGAAGC...GCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649717.1
3UTR CAA 72 bp AACTTCAATGCAGAAAAGCTGGCTTTGGGCAGTCCATaGCTACTCCTTTGTACCCCACAATACATACTCTAC +
Preference number: 4 (lower is better)
Translates to: NFNAEKLALGSP*LLLCTPQYILY
Trigger: GTAGAGTATGTATTGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTGCATTGAAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
3UTR CAA 72 bp GAGTCTGCATTGGTCAGCTTCATCCAATACAAGGGCTaGGCCATTCTCCTCTTAATCATTCTTACCCTATTG +
Preference number: 4 (lower is better)
Translates to: ESALVSFIQYKG*AILLLIILTLL
Trigger: CAATAGGGTAAGAATGATTAAGAGGAGAATGGCCAAGCCCTTGTATTGGATGAAGCTGACCAATGCAGACTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636666.1
ENST00000644342.1
ENST00000646800.1
3UTR CAA 72 bp GGGACGTCTTTGGTTGGGATTTCACTTTTCACAGCATaGGCATTATCTGAGATGGTGACAGTTTGTGTCTTC +
Preference number: 4 (lower is better)
Translates to: GTSLVGISLFTA*ALSEMVTVCVF
Trigger: GAAGACACAAACTGTCACCATCTCAGATAATGCCAATGCTGTGAAAAGTGAAATCCCAACCAAAGACGTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643155.1
CDS-3UTR TCA 90 bp ATCTTAATTCAGAGAAGGGTTTATGTACAGATCTTGAGTAAATCTGTGTTCCAGTCTTCTCTGTTGTCATaGTGTTGCGGTGGCTCCGGG +
Preference number: 4 (lower is better)
Translates to: ILIQRRVYVQILSKSVFQSSLLS*CCGGSG
Trigger: CCCGGAGCCACCGCAACATCATGACAACAGAGAAGA...CTGGAACACAGATTTACTCAAGATCTGTACATAAACCCTTCTCTGAATTAAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644600.1
ENST00000644780.1
ENST00000650265.1
CDS-3UTR TCA 90 bp TTCAACACAAGTACACGAACAAACAGGTCTGAAGTATATCAGGAAAACAAAGTATCTTCTCTGTTGTCATaGTGTTGCGGTGGCTCCGGG +
Preference number: 4 (lower is better)
Translates to: FNTSTRTNRSEVYQENKVSSLLS*CCGGSG
Trigger: CCCGGAGCCACCGCAACATCATGACAACAGAGAAGA...TACTTTGTTTTCCTGATATACTTCAGACCTGTTTGTTCGTGTACTTGTGTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644600.1
ENST00000644780.1
ENST00000650265.1
CDS-3UTR TCA 90 bp GAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGTTTCTTCTGTTGGTGCTGTaGATTTTCGGCCTCAGTCAC +
Preference number: 4 (lower is better)
Translates to: ESLKSDYGRLASLSFCWFLLLVL*IFGLSH
Trigger: GTGACTGAGGCCGAAAATTCACAGCACCAACAGAAG...AAACCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp ATTACTTTGGTGCTGCCAATCACTAATTGGGCAATGCCAATAATGAAGCATTCTCTTCTGTTGGTGCTGTaGATTTTCGGCCTCAGTCAC +
Preference number: 4 (lower is better)
Translates to: ITLVLPITNWAMPIMKHSLLLVL*IFGLSH
Trigger: GTGACTGAGGCCGAAAATTCACAGCACCAACAGAAG...AGAATGCTTCATTATTGGCATTGCCCAATTAGTGATTGGCAGCACCAAAGTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000646800.1
CDS-3UTR TCA 90 bp ATTGTCCAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCCTTCTGTTGGTGCTGTaGATTTTCGGCCTCAGTCAC +
Preference number: 4 (lower is better)
Translates to: IVQLRSFYSPCNFCTLLSLLLVL*IFGLSH
Trigger: GTGACTGAGGCCGAAAATTCACAGCACCAACAGAAG...GGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTGGACAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000646800.1
CDS-3UTR TCA 90 bp GTCCAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATACTTCTGTTGGTGCTGTaGATTTTCGGCCTCAGTCAC +
Preference number: 4 (lower is better)
Translates to: VQLRSFYSPCNFCTLLSILLLVL*IFGLSH
Trigger: GTGACTGAGGCCGAAAATTCACAGCACCAACAGAAG...TATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTGGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000646800.1
CDS-3UTR TCA 90 bp GAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGTTTAGGTTCTTGTTGGCCTaGGTTTATGGCTTCCTCACC +
Preference number: 4 (lower is better)
Translates to: ESLKSDYGRLASLSFCWFRFLLA*VYGFLT
Trigger: GGTGAGGAAGCCATAAACTCAGGCCAACAAGAACCT...AAACCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp ATTACTTTGGTGCTGCCAATCACTAATTGGGCAATGCCAATAATGAAGCATTCTAGGTTCTTGTTGGCCTaGGTTTATGGCTTCCTCACC +
Preference number: 4 (lower is better)
Translates to: ITLVLPITNWAMPIMKHSRFLLA*VYGFLT
Trigger: GGTGAGGAAGCCATAAACTCAGGCCAACAAGAACCT...AGAATGCTTCATTATTGGCATTGCCCAATTAGTGATTGGCAGCACCAAAGTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000646800.1
CDS-3UTR TCA 90 bp AGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAGTCAAGACAAGGTTCTTGTTGGCCTaGGTTTATGGCTTCCTCACC +
Preference number: 4 (lower is better)
Translates to: RSFYSPCNFCTLLSIVKTRFLLA*VYGFLT
Trigger: GGTGAGGAAGCCATAAACTCAGGCCAACAAGAACCT...TGTCTTGACTATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000646800.1
CDS-3UTR TCA 90 bp GGACACATACTTGTCACAAGTGAACTTGAGGTCACAAAGCCATTGATTAAAAACAGGTTCTTGTTGGCCTaGGTTTATGGCTTCCTCACC +
Preference number: 4 (lower is better)
Translates to: GHILVTSELEVTKPLIKNRFLLA*VYGFLT
Trigger: GGTGAGGAAGCCATAAACTCAGGCCAACAAGAACCT...GTTTTTAATCAATGGCTTTGTGACCTCAAGTTCACTTGTGACAAGTATGTGTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp TCCATTAGAGCTTTTGGCCCAAAGTGCCTATTTTTCTGTGAGATTTGGTCTCCTGAGATTTGGGCCTTTTaGGAAACGAGGAGAATAGTC +
Preference number: 4 (lower is better)
Translates to: SIRAFGPKCLFFCEIWSPEIWAF*ETRRIV
Trigger: GACTATTCTCCTCGTTTCTCAAAAGGCCCAAATCTC...AGGAGACCAAATCTCACAGAAAAATAGGCACTTTGGGCCAAAAGCTCTAATGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp AGTTCTCAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTCCTATAATTGCAGAGATTTGGGCCTTTTaGGAAACGAGGAGAATAGTC +
Preference number: 4 (lower is better)
Translates to: SSQRLIIYWWLQIAPIIAEIWAF*ETRRIV
Trigger: GACTATTCTCCTCGTTTCTCAAAAGGCCCAAATCTC...TGCAATTATAGGAGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTGAGAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648181.1
ENST00000648891.1
CDS-3UTR TCA 90 bp ATTGTCCAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCTCTTCCTCGGACACCTaGGATTTGGGCCTTTTGAGA +
Preference number: 4 (lower is better)
Translates to: IVQLRSFYSPCNFCTLLSSSSDT*DLGLLR
Trigger: TCTCAAAAGGCCCAAATCTCAGGTGTCCGAGGAAGA...GGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTGGACAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000646800.1
CDS-3UTR TCA 90 bp GTCCAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATATCTTCCTCGGACACCTaGGATTTGGGCCTTTTGAGA +
Preference number: 4 (lower is better)
Translates to: VQLRSFYSPCNFCTLLSISSSDT*DLGLLR
Trigger: TCTCAAAAGGCCCAAATCTCAGGTGTCCGAGGAAGA...TATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTGGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000646800.1
CDS-3UTR TCA 90 bp GTCCAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAAAGATGGGTCTGTTTTaGGTTCCGGTTCAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: VQLRSFYSPCNFCTLLSIKMGLF*VPVQEL
Trigger: CAGCTCCTGAACCGGAACTCAAAACAGACCCATCTT...TATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTGGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000646800.1
CDS-3UTR TCA 90 bp GGCAGGAAAAAGTTGTCTGTCCCTGTACAGCTCAGAAATACTCATAAAAAGGCCGCACTGCTTAATGAATaGAGATCCAAAGATGGGTCT +
Preference number: 4 (lower is better)
Translates to: GRKKLSVPVQLRNTHKKAALLNE*RSKDGS
Trigger: AGACCCATCTTTGGATCTTCATTCATTAAGCAGTGC...GGCCTTTTTATGAGTATTTCTGAGCTGTACAGGGACAGACAACTTTTTCCTGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp AGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAGAAGTTCAATGGGCACTGCTTAATGAATaGAGATCCAAAGATGGGTCT +
Preference number: 4 (lower is better)
Translates to: RGHHTAITQLKPRTEVQWALLNE*RSKDGS
Trigger: AGACCCATCTTTGGATCTTCATTCATTAAGCAGTGC...CCATTGAACTTCTGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp CAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTCCTATAATTGCACTGGGTCTTCTTCCAAAAGATTaGGATGCTCACATACTCGTT +
Preference number: 4 (lower is better)
Translates to: QRLIIYWWLQIAPIIALGLLPKD*DAHILV
Trigger: AACGAGTATGTGAGCATCTCAATCTTTTGGAAGAAG...ACCCAGTGCAATTATAGGAGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648891.1
CDS-3UTR TCA 90 bp AAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAATACATACTCTTCTTCCAAAAGATTaGGATGCTCACATACTCGTT +
Preference number: 4 (lower is better)
Translates to: KAGFGQSIATPLYPTIHTLLPKD*DAHILV
Trigger: AACGAGTATGTGAGCATCTCAATCTTTTGGAAGAAG...AGTATGTATTGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp GAAGTCAACATGCAAACAGAGGACACATACTTGTCACAAGTGAACTTGAGGTCATCAAGTTCCTTGGTCTaGTTCGGGGCCAGTTTAAAA +
Preference number: 4 (lower is better)
Translates to: EVNMQTEDTYLSQVNLRSSSSLV*FGASLK
Trigger: TTTTAAACTGGCCCCGAATCAGACCAAGGAACTTGA...TGACCTCAAGTTCACTTGTGACAAGTATGTGTCCTCTGTTTGCATGTTGACTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp ACTATCAAGATCAGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACATCAAGTTCCTTGGTCTaGTTCGGGGCCAGTTTAAAA +
Preference number: 4 (lower is better)
Translates to: TIKIRGHHTAITQLKPRTSSSLV*FGASLK
Trigger: TTTTAAACTGGCCCCGAATCAGACCAAGGAACTTGA...TGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCTGATCTTGATAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp TTAAACTTCAATGCAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTTCAAGTTCCTTGGTCTaGTTCGGGGCCAGTTTAAAA +
Preference number: 4 (lower is better)
Translates to: LNFNAEKLALGSPLLLLCSSSLV*FGASLK
Trigger: TTTTAAACTGGCCCCGAATCAGACCAAGGAACTTGA...ACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTGCATTGAAGTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp AGTTCTCAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTCCTATAATTGCATCAAGTTCCTTGGTCTaGTTCGGGGCCAGTTTAAAA +
Preference number: 4 (lower is better)
Translates to: SSQRLIIYWWLQIAPIIASSSLV*FGASLK
Trigger: TTTTAAACTGGCCCCGAATCAGACCAAGGAACTTGA...TGCAATTATAGGAGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTGAGAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648181.1
ENST00000648891.1
CDS-3UTR TCA 90 bp GGCAGGAAAAAGTTGTCTGTCCCTGTACAGCTCAGAAATACTCATAAAAAGGCCACTTATGCAGTTCCATaGCCTTCTCTTCAAGTTCCT +
Preference number: 4 (lower is better)
Translates to: GRKKLSVPVQLRNTHKKATYAVP*PSLQVP
Trigger: AGGAACTTGAAGAGAAGGTCATGGAACTGCATAAGT...GGCCTTTTTATGAGTATTTCTGAGCTGTACAGGGACAGACAACTTTTTCCTGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp TCTATACACCAGGCAGGAAAAAGTTGTCTGTCCCTGTACAGCTCAGAAATACTCACTTATGCAGTTCCATaGCCTTCTCTTCAAGTTCCT +
Preference number: 4 (lower is better)
Translates to: SIHQAGKSCLSLYSSEILTYAVP*PSLQVP
Trigger: AGGAACTTGAAGAGAAGGTCATGGAACTGCATAAGT...GAGTATTTCTGAGCTGTACAGGGACAGACAACTTTTTCCTGCCTGGTGTATAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp TTAAACTTCAATGCAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTAGTCATGGACCTGTATaGCTTATGCAGTTCCATGAC +
Preference number: 4 (lower is better)
Translates to: LNFNAEKLALGSPLLLLCSHGPV*LMQFHD
Trigger: GTCATGGAACTGCATAAGTCATACAGGTCCATGACT...ACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTGCATTGAAGTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp TTCAACACAAGTACACGAACAAACAGGTCTGAAGTATATCAGGAAAACAAAGTAAACTCCAAGTCAGCCTaGGCTGGAGTCATGGACCTG +
Preference number: 4 (lower is better)
Translates to: FNTSTRTNRSEVYQENKVNSKSA*AGVMDL
Trigger: CAGGTCCATGACTCCAGCTCAGGCTGACTTGGAGTT...TACTTTGTTTTCCTGATATACTTCAGACCTGTTTGTTCGTGTACTTGTGTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp GGATCAATGAGATCTAGAAGAATCTCTTGGTATAAACTCCCAATAGAAACTGAAAACTCCAAGTCAGCCTaGGCTGGAGTCATGGACCTG +
Preference number: 4 (lower is better)
Translates to: GSMRSRRISWYKLPIETENSKSA*AGVMDL
Trigger: CAGGTCCATGACTCCAGCTCAGGCTGACTTGGAGTT...TTCAGTTTCTATTGGGAGTTTATACCAAGAGATTCTTCTAGATCTCATTGATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp GAAGTCAACATGCAAACAGAGGACACATACTTGTCACAAGTGAACTTGAGGTCAAGCAGACACCTAGGATaGTATCTACTCCTTCCAAGT +
Preference number: 4 (lower is better)
Translates to: EVNMQTEDTYLSQVNLRSSRHLG*YLLLPS
Trigger: ACTTGGAAGGAGTAGATATCATCCTAGGTGTCTGCT...TGACCTCAAGTTCACTTGTGACAAGTATGTGTCCTCTGTTTGCATGTTGACTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp ACTATCAAGATCAGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAAGCAGACACCTAGGATaGTATCTACTCCTTCCAAGT +
Preference number: 4 (lower is better)
Translates to: TIKIRGHHTAITQLKPRTSRHLG*YLLLPS
Trigger: ACTTGGAAGGAGTAGATATCATCCTAGGTGTCTGCT...TGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCTGATCTTGATAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp GGCAGGAAAAAGTTGTCTGTCCCTGTACAGCTCAGAAATACTCATAAAAAGGCCGGTAACTGGGAAGTTTaGATCCGATGGTACTTTCAT +
Preference number: 4 (lower is better)
Translates to: GRKKLSVPVQLRNTHKKAGNWEV*IRWYFH
Trigger: ATGAAAGTACCATCGGATTCAAACTTCCCAGTTACC...GGCCTTTTTATGAGTATTTCTGAGCTGTACAGGGACAGACAACTTTTTCCTGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp CAGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAGAAGTTCAATGGGTAACTGGGAAGTTTaGATCCGATGGTACTTTCAT +
Preference number: 4 (lower is better)
Translates to: QRASYSNNTVEAKDRSSMGNWEV*IRWYFH
Trigger: ATGAAAGTACCATCGGATTCAAACTTCCCAGTTACC...CATTGAACTTCTGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp CAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAATACAAATCTGAAAAACGTGTaGTGTTCTACACAGACTTTC +
Preference number: 4 (lower is better)
Translates to: QKSWLWAVHCYSFVPHNTNLKNV*CSTQTF
Trigger: GAAAGTCTGTGTAGAACATCACACGTTTTTCAGATT...TGTATTGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp GAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGTTTTGTTTGGTCACCATTTaGGGTGGGTACTGTCACCTC +
Preference number: 4 (lower is better)
Translates to: ESLKSDYGRLASLSFCWFCLVTI*GGYCHL
Trigger: GAGGTGACAGTACCCACCTCAAATGGTGACCAAACA...AAACCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000349460.9
ENST00000373798.5
ENST00000642937.2
ENST00000643155.1
CDS-3UTR TCA 90 bp AGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAGTCAAGACATGTTTGGTCACCATTTaGGGTGGGTACTGTCACCTC +
Preference number: 4 (lower is better)
Translates to: RSFYSPCNFCTLLSIVKTCLVTI*GGYCHL
Trigger: GAGGTGACAGTACCCACCTCAAATGGTGACCAAACA...TGTCTTGACTATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644470.1
ENST00000644600.1
ENST00000646800.1
CDS-3UTR TCA 90 bp GCCACATTCCTTGTCATTTGGGATGAAAGAAAGGCCCAGGATCAGACAGAAGTATTTTTGATCTCCTCTTaGCTCTTGTCTAAATCCTCC +
Preference number: 4 (lower is better)
Translates to: ATFLVIWDERKAQDQTEVFLISS*LLSKSS
Trigger: GGAGGATTTAGACAAGAGTCAAGAGGAGATCAAAAA...TACTTCTGTCTGATCCTGGGCCTTTCTTTCATCCCAAATGACAAGGAATGTGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
CDS-3UTR TCA 90 bp AAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAATACATACTTCTTTTTCAGCTCACTaGTGCTGGCATGATGTTTTT +
Preference number: 4 (lower is better)
Translates to: KAGFGQSIATPLYPTIHTSFSAH*CWHDVF
Trigger: AAAAACATCATGCCAGCATCAGTGAGCTGAAAAAGA...AGTATGTATTGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp CAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTCCTATAATTGCACTGGGTTCTTTTTCAGCTCACTaGTGCTGGCATGATGTTTTT +
Preference number: 4 (lower is better)
Translates to: QRLIIYWWLQIAPIIALGSFSAH*CWHDVF
Trigger: AAAAACATCATGCCAGCATCAGTGAGCTGAAAAAGA...ACCCAGTGCAATTATAGGAGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648181.1
ENST00000648891.1
CDS-3UTR TCA 90 bp TTAAACTTCAATGCAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTCTGGTACAGACTCCATaGAGTTCTTTTTCAGCTCAC +
Preference number: 4 (lower is better)
Translates to: LNFNAEKLALGSPLLLLCLVQTP*SSFSAH
Trigger: GTGAGCTGAAAAAGAACTTCATGGAGTCTGTACCAG...ACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTGCATTGAAGTTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp AGAAGTCAACATGCAAACAGAGGACACATACTTGTCACAAGTGAACTTGAGGTCCTGGTACAGACTCCATaGAGTTCTTTTTCAGCTCAC +
Preference number: 4 (lower is better)
Translates to: RSQHANRGHILVTSELEVLVQTP*SSFSAH
Trigger: GTGAGCTGAAAAAGAACTTCATGGAGTCTGTACCAG...GACCTCAAGTTCACTTGTGACAAGTATGTGTCCTCTGTTTGCATGTTGACTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp GAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGTTTGTTCGGAAGGGTGAGTaGGTGGATAAGCGTTTATCC +
Preference number: 4 (lower is better)
Translates to: ESLKSDYGRLASLSFCWFVRKGE*VDKRLS
Trigger: GGATAAACGCTTATCCACTCACTCACCCTTCCGAAC...AAACCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
CDS-3UTR TCA 90 bp ATTGTCCAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCGTTCGGAAGGGTGAGTaGGTGGATAAGCGTTTATCC +
Preference number: 4 (lower is better)
Translates to: IVQLRSFYSPCNFCTLLSVRKGE*VDKRLS
Trigger: GGATAAACGCTTATCCACTCACTCACCCTTCCGAAC...GGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTGGACAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644470.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR TCA 90 bp GGACACATACTTGTCACAAGTGAACTTGAGGTCACAAAGCCATTGATTAAAAACGTTCGGAAGGGTGAGTaGGTGGATAAGCGTTTATCC +
Preference number: 4 (lower is better)
Translates to: GHILVTSELEVTKPLIKNVRKGE*VDKRLS
Trigger: GGATAAACGCTTATCCACTCACTCACCCTTCCGAAC...GTTTTTAATCAATGGCTTTGTGACCTCAAGTTCACTTGTGACAAGTATGTGTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp CAGATATCTGAAGCAACTTCCATGTCTTTGACCCAAAGAAGCTCCAAAAAGAAAGTTCGGAAGGGTGAGTaGGTGGATAAGCGTTTATCC +
Preference number: 4 (lower is better)
Translates to: QISEATSMSLTQRSSKKKVRKGE*VDKRLS
Trigger: GGATAAACGCTTATCCACTCACTCACCCTTCCGAAC...TTTCTTTTTGGAGCTTCTTTGGGTCAAAGACATGGAAGTTGCTTCAGATATCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR TCA 90 bp GCCACATTCCTTGTCATTTGGGATGAAAGAAAGGCCCAGGATCAGACAGAAGTATTCAATACGTGTCTCTaGAATCCCACCTTTTACAGT +
Preference number: 4 (lower is better)
Translates to: ATFLVIWDERKAQDQTEVFNTCL*NPTFYS
Trigger: ACTGTAAAAGGTGGGATTTCAGAGACACGTATTGAA...TACTTCTGTCTGATCCTGGGCCTTTCTTTCATCCCAAATGACAAGGAATGTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp GGGCTCTTTCCCTCCCTCCTGTTGTTCATGTCTCACATGGGTACCAAAAGAAAATATCAGCATCTCCTGTaGTCACAATTCTCTTTTCAA +
Preference number: 4 (lower is better)
Translates to: GLFPSLLLFMSHMGTKRKYQHLL*SQFSFQ
Trigger: TTGAAAAGAGAATTGTGATCACAGGAGATGCTGATA...TTTTCTTTTGGTACCCATGTGAGACATGAACAACAGGAGGGAGGGAAAGAGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp AATCTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCGCTCCTTTGCCTCCTTaGTGGCTTGTACAAGGACCT +
Preference number: 4 (lower is better)
Translates to: NLESLKSDYGRLASLSFCAPLPP*WLVQGP
Trigger: AGGTCCTTGTACAAGCCATCAAGGAGGCAAAGGAGC...GCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp GCCACATTCCTTGTCATTTGGGATGAAAGAAAGGCCCAGGATCAGACAGAAGTAATAATCTTGAAAGTCTaGAGTCTGACTATGGCAGGT +
Preference number: 4 (lower is better)
Translates to: ATFLVIWDERKAQDQTEVIILKV*SLTMAG
Trigger: ACCTGCCATAGTCAGACTTCAGACTTTCAAGATTAT...TACTTCTGTCTGATCCTGGGCCTTTCTTTCATCCCAAATGACAAGGAATGTGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp AATCTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCGGCTTCCAACACAGCTaGCAAGAGTCCTTGGAGGAT +
Preference number: 4 (lower is better)
Translates to: NLESLKSDYGRLASLSFCGFQHS*QESLED
Trigger: ATCCTCCAAGGACTCTTGTCAGCTGTGTTGGAAGCC...GCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp CTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGCCTTGTCATTTGGGATaGAAGAAAGGCCCAGGATCA +
Preference number: 4 (lower is better)
Translates to: LESLKSDYGRLASLSFCWPCHLG*KKGPGS
Trigger: TGATCCTGGGCCTTTCTTTCATCCCAAATGACAAGG...CCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp TCCATTAGAGCTTTTGGCCCAAAGTGCCTATTTTTCTGTGAGATTTGGTCTCCTCAGGCAGGTTCCTGTTaGGAGAAGAAAGGTCAAAAA +
Preference number: 4 (lower is better)
Translates to: SIRAFGPKCLFFCEIWSPQAGSC*EKKGQK
Trigger: TTTTTGACCTTTCTTCTCTCAACAGGAACCTGCCTG...AGGAGACCAAATCTCACAGAAAAATAGGCACTTTGGGCCAAAAGCTCTAATGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp GAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGTTTGGCAGAAATTTCCCGTaGGCATCAAAAGGCGTCAGT +
Preference number: 4 (lower is better)
Translates to: ESLKSDYGRLASLSFCWFGRNFP*ASKGVS
Trigger: ACTGACGCCTTTTGATGCTCACGGGAAATTTCTGCC...AAACCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR TCA 90 bp GGATCAATGAGATCTAGAAGAATCTCTTGGTATAAACTCCCAATAGAAACTGAACAACCAGCCTGGGGCTaGGATCCTGGGCAGAAATTT +
Preference number: 4 (lower is better)
Translates to: GSMRSRRISWYKLPIETEQPAWG*DPGQKF
Trigger: AAATTTCTGCCCAGGATCTCAGCCCCAGGCTGGTTG...TTCAGTTTCTATTGGGAGTTTATACCAAGAGATTCTTCTAGATCTCATTGATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR TCA 90 bp CAGATATCTGAAGCAACTTCCATGTCTTTGACCCAAAGAAGCTCCAAAAAGAAAAAGATTCTGCCAATCTaGTTCTGCTGCCCGAGTTCC +
Preference number: 4 (lower is better)
Translates to: QISEATSMSLTQRSSKKKKILPI*FCCPSS
Trigger: GGAACTCGGGCAGCAGAATCAGATTGGCAGAATCTT...TTTCTTTTTGGAGCTTCTTTGGGTCAAAGACATGGAAGTTGCTTCAGATATCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR TCA 90 bp CTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGAATCTGGATCTTCTCTaGGTTCTTCCTGAGCAGGAC +
Preference number: 4 (lower is better)
Translates to: LESLKSDYGRLASLSFCWNLDLL*VLPEQD
Trigger: GTCCTGCTCAGGAAGAACTCAGAGAAGATCCAGATT...CCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373800.7
ENST00000643155.1
CDS-3UTR TCA 90 bp GAAGTCAACATGCAAACAGAGGACACATACTTGTCACAAGTGAACTTGAGGTCAATAGGTAGAGTAGTCTaGGAATTTCAGTCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: EVNMQTEDTYLSQVNLRSIGRVV*EFQSWL
Trigger: CAGCCAGGACTGAAATTCTCAGACTACTCTACCTAT...TGACCTCAAGTTCACTTGTGACAAGTATGTGTCCTCTGTTTGCATGTTGACTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp AAAGTAGAGGTGGCACTTTTTGAGAGACTTGTGATCCTCAGGGATTGGAATAGAATAGGTAGAGTAGTCTaGGAATTTCAGTCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: KVEVALFERLVILRDWNRIGRVV*EFQSWL
Trigger: CAGCCAGGACTGAAATTCTCAGACTACTCTACCTAT...TCTATTCCAATCCCTGAGGATCACAAGTCTCTCAAAAAGTGCCACCTCTACTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR TCA 90 bp TTAAACTTCAATGCAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTATAGGTAGAGTAGTCTaGGAATTTCAGTCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: LNFNAEKLALGSPLLLLCIGRVV*EFQSWL
Trigger: CAGCCAGGACTGAAATTCTCAGACTACTCTACCTAT...ACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTGCATTGAAGTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp CAGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAGAAGTTCAATGTGTGATGGTATCTTTTaGGTCTGCATTGGTCAGCTT +
Preference number: 4 (lower is better)
Translates to: QRASYSNNTVEAKDRSSMCDGIF*VCIGQL
Trigger: AAGCTGACCAATGCAGACTCAAAAGATACCATCACA...CATTGAACTTCTGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636666.1
ENST00000644342.1
ENST00000646800.1
CDS-3UTR TCA 90 bp TCAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTCCTATAATTGCACTGGGCCTGAAGGCACAGTTTaGATACAAATAAACCTCTAC +
Preference number: 4 (lower is better)
Translates to: SEANHLLVAPNSSYNCTGPEGTV*IQINLY
Trigger: GTAGAGGTTTATTTGTATTCAAACTGTGCCTTCAGG...CCCAGTGCAATTATAGGAGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648181.1
ENST00000648891.1
CDS-3UTR TCA 90 bp CAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTCCTATAATTGCACTGGGTAAACTTTCTAGTCCCTaGAGGCACAGTTTGAATACA +
Preference number: 4 (lower is better)
Translates to: QRLIIYWWLQIAPIIALGKLSSP*RHSLNT
Trigger: TGTATTCAAACTGTGCCTTCAGGGACTAGAAAGTTT...ACCCAGTGCAATTATAGGAGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648181.1
ENST00000648891.1
CDS-3UTR GCA 90 bp TCCATTAGAGCTTTTGGCCCAAAGTGCCTATTTTTCTGTGAGATTTGGTCTCCTTCTTCCTTCTGTTGGTaGTGTGAATTTTCGGCCTCA +
Preference number: 4 (lower is better)
Translates to: SIRAFGPKCLFFCEIWSPSSFCW*CEFSAS
Trigger: TGAGGCCGAAAATTCACAGCACCAACAGAAGGAAGA...AGGAGACCAAATCTCACAGAAAAATAGGCACTTTGGGCCAAAAGCTCTAATGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp GAAGTCAACATGCAAACAGAGGACACATACTTGTCACAAGTGAACTTGAGGTCATCTTCCTTCTGTTGGTaGTGTGAATTTTCGGCCTCA +
Preference number: 4 (lower is better)
Translates to: EVNMQTEDTYLSQVNLRSSSFCW*CEFSAS
Trigger: TGAGGCCGAAAATTCACAGCACCAACAGAAGGAAGA...TGACCTCAAGTTCACTTGTGACAAGTATGTGTCCTCTGTTTGCATGTTGACTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR GCA 90 bp GCCACATTCCTTGTCATTTGGGATGAAAGAAAGGCCCAGGATCAGACAGAAGTAATTATCTCCTTCAGCTaGTGTTTGACAAGATTCCTC +
Preference number: 4 (lower is better)
Translates to: ATFLVIWDERKAQDQTEVIISFS*CLTRFL
Trigger: GAGGAATCTTGTCAAACAGCAGCTGAAGGAGATAAT...TACTTCTGTCTGATCCTGGGCCTTTCTTTCATCCCAAATGACAAGGAATGTGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp AAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAATACATACTATTATCTCCTTCAGCTaGTGTTTGACAAGATTCCTC +
Preference number: 4 (lower is better)
Translates to: KAGFGQSIATPLYPTIHTIISFS*CLTRFL
Trigger: GAGGAATCTTGTCAAACAGCAGCTGAAGGAGATAAT...AGTATGTATTGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR GCA 90 bp TCAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTCCTATAATTGCACTGGGATTATCTCCTTCAGCTaGTGTTTGACAAGATTCCTC +
Preference number: 4 (lower is better)
Translates to: SEANHLLVAPNSSYNCTGIISFS*CLTRFL
Trigger: GAGGAATCTTGTCAAACAGCAGCTGAAGGAGATAAT...CCCAGTGCAATTATAGGAGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000645184.1
ENST00000648181.1
ENST00000648891.1
CDS-3UTR GCA 90 bp GGACACATACTTGTCACAAGTGAACTTGAGGTCACAAAGCCATTGATTAAAAACGTCGTGAAAGTCCTCTaGTTTCTGATGTCCGCTCCT +
Preference number: 4 (lower is better)
Translates to: GHILVTSELEVTKPLIKNVVKVL*FLMSAP
Trigger: AGGAGCGGACATCAGAAAGCAGAGGACTTTCACGAC...GTTTTTAATCAATGGCTTTGTGACCTCAAGTTCACTTGTGACAAGTATGTGTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR GCA 90 bp CTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGCTGACTCTACTTCTTTaGCTTCTTCCTCGGACACCT +
Preference number: 4 (lower is better)
Translates to: LESLKSDYGRLASLSFCWLTLLL*LLPRTP
Trigger: AGGTGTCCGAGGAAGAAGGCAAAGAAGTAGAGTCAG...CCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp TTGGATCCTAGCGCAAGAAATTTGCTTTTGGGAATGGTGTCTGTAGATGTCAATCTGACTCTACTTCTTTaGCTTCTTCCTCGGACACCT +
Preference number: 4 (lower is better)
Translates to: LDPSARNLLLGMVSVDVNLTLLL*LLPRTP
Trigger: AGGTGTCCGAGGAAGAAGGCAAAGAAGTAGAGTCAG...ATTGACATCTACAGACACCATTCCCAAAAGCAAATTTCTTGCGCTAGGATCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
CDS-3UTR GCA 90 bp CAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTCCTATAATTGCACTGGGTGCTGTGTTTCTGCACTaGTTAATGAATGAAGATCCA +
Preference number: 4 (lower is better)
Translates to: QRLIIYWWLQIAPIIALGAVFLH*LMNEDP
Trigger: TGGATCTTCATTCATTAAGCAGTGCAGAAACACAGC...ACCCAGTGCAATTATAGGAGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648891.1
CDS-3UTR GCA 90 bp AAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAATACATACTGCTGTGTTTCTGCACTaGTTAATGAATGAAGATCCA +
Preference number: 4 (lower is better)
Translates to: KAGFGQSIATPLYPTIHTAVFLH*LMNEDP
Trigger: TGGATCTTCATTCATTAAGCAGTGCAGAAACACAGC...AGTATGTATTGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR GCA 90 bp CAGAGACAGTTCTCAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTCCTATGCTGTGTTTCTGCACTaGTTAATGAATGAAGATCCA +
Preference number: 4 (lower is better)
Translates to: QRQFSEANHLLVAPNSSYAVFLH*LMNEDP
Trigger: TGGATCTTCATTCATTAAGCAGTGCAGAAACACAGC...ATAGGAGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTGAGAACTGTCTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648891.1
CDS-3UTR GCA 90 bp GGATCAATGAGATCTAGAAGAATCTCTTGGTATAAACTCCCAATAGAAACTGAAACAGGGCAGACGTCCTaGAACTATGTCCTGCCGAAG +
Preference number: 4 (lower is better)
Translates to: GSMRSRRISWYKLPIETETGQTS*NYVLPK
Trigger: CTTCGGCAGGACATAGTTGCAGGACGTCTGCCCTGT...TTCAGTTTCTATTGGGAGTTTATACCAAGAGATTCTTCTAGATCTCATTGATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp GAGACATTAACCAAATCATCCATATTGGTACATTCAAGTGCCATAAAAAGCAAGACAGGGCAGACGTCCTaGAACTATGTCCTGCCGAAG +
Preference number: 4 (lower is better)
Translates to: ETLTKSSILVHSSAIKSKTGQTS*NYVLPK
Trigger: CTTCGGCAGGACATAGTTGCAGGACGTCTGCCCTGT...CTTGCTTTTTATGGCACTTGAATGTACCAATATGGATGATTTGGTTAATGTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR GCA 90 bp GACATTAACCAAATCATCCATATTGGTACATTCAAGTGCCATAAAAAGCAAGCTACAGGGCAGACGTCCTaGAACTATGTCCTGCCGAAG +
Preference number: 4 (lower is better)
Translates to: DINQIIHIGTFKCHKKQATGQTS*NYVLPK
Trigger: CTTCGGCAGGACATAGTTGCAGGACGTCTGCCCTGT...AGCTTGCTTTTTATGGCACTTGAATGTACCAATATGGATGATTTGGTTAATGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR GCA 90 bp CAGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAGAAGTTCAATGGACCTGTATGACTTATaGAGTTCCATGACCTTCTCT +
Preference number: 4 (lower is better)
Translates to: QRASYSNNTVEAKDRSSMDLYDL*SSMTFS
Trigger: AGAGAAGGTCATGGAACTGCATAAGTCATACAGGTC...CATTGAACTTCTGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR GCA 90 bp AGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAGAAGTTCAATGGGACCTGTATGACTTATaGAGTTCCATGACCTTCTCT +
Preference number: 4 (lower is better)
Translates to: RGHHTAITQLKPRTEVQWDLYDL*SSMTFS
Trigger: AGAGAAGGTCATGGAACTGCATAAGTCATACAGGTC...CCATTGAACTTCTGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR GCA 90 bp GGCAGGAAAAAGTTGTCTGTCCCTGTACAGCTCAGAAATACTCATAAAAAGGCCGACCTGTATGACTTATaGAGTTCCATGACCTTCTCT +
Preference number: 4 (lower is better)
Translates to: GRKKLSVPVQLRNTHKKADLYDL*SSMTFS
Trigger: AGAGAAGGTCATGGAACTGCATAAGTCATACAGGTC...GGCCTTTTTATGAGTATTTCTGAGCTGTACAGGGACAGACAACTTTTTCCTGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR GCA 90 bp GCCACATTCCTTGTCATTTGGGATGAAAGAAAGGCCCAGGATCAGACAGAAGTATCCTTCCAAGTCCTTTaGTTTATGAAGATCAACTCC +
Preference number: 4 (lower is better)
Translates to: ATFLVIWDERKAQDQTEVSFQVL*FMKINS
Trigger: GGAGTTGATCTTCATAAAGCAAAGGACTTGGAAGGA...TACTTCTGTCTGATCCTGGGCCTTTCTTTCATCCCAAATGACAAGGAATGTGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp CAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTCCTATAATTGCACTGGGTTCCTTCCAAGTCCTTTaGTTTATGAAGATCAACTCC +
Preference number: 4 (lower is better)
Translates to: QRLIIYWWLQIAPIIALGSFQVL*FMKINS
Trigger: GGAGTTGATCTTCATAAAGCAAAGGACTTGGAAGGA...ACCCAGTGCAATTATAGGAGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000645184.1
ENST00000648181.1
ENST00000648891.1
CDS-3UTR GCA 90 bp CTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGATGGTACTTTCATACTaGTCTTGCTCTCCAGGCCGA +
Preference number: 4 (lower is better)
Translates to: LESLKSDYGRLASLSFCWMVLSY*SCSPGR
Trigger: TCGGCCTGGAGAGCAAGAGCAGTATGAAAGTACCAT...CCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp TCTATACACCAGGCAGGAAAAAGTTGTCTGTCCCTGTACAGCTCAGAAATACTCCTAGCGCAAGAAATTTaGTTTTGGGAATGGTGTCTG +
Preference number: 4 (lower is better)
Translates to: SIHQAGKSCLSLYSSEILLAQEI*FWEWCL
Trigger: CAGACACCATTCCCAAAAGCAAATTTCTTGCGCTAG...GAGTATTTCTGAGCTGTACAGGGACAGACAACTTTTTCCTGCCTGGTGTATAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR GCA 90 bp AGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAGAAGTTCAATGGCTAGCGCAAGAAATTTaGTTTTGGGAATGGTGTCTG +
Preference number: 4 (lower is better)
Translates to: RGHHTAITQLKPRTEVQWLAQEI*FWEWCL
Trigger: CAGACACCATTCCCAAAAGCAAATTTCTTGCGCTAG...CCATTGAACTTCTGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR GCA 90 bp CAGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAGAAGTTCAATGCTAGCGCAAGAAATTTaGTTTTGGGAATGGTGTCTG +
Preference number: 4 (lower is better)
Translates to: QRASYSNNTVEAKDRSSMLAQEI*FWEWCL
Trigger: CAGACACCATTCCCAAAAGCAAATTTCTTGCGCTAG...CATTGAACTTCTGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR GCA 90 bp GGATCAATGAGATCTAGAAGAATCTCTTGGTATAAACTCCCAATAGAAACTGAAGGACGCCCGTTTACTTaGTGTACGCTCGAAGTGTGG +
Preference number: 4 (lower is better)
Translates to: GSMRSRRISWYKLPIETEGRPFT*CTLEVW
Trigger: CCACACTTCGAGCGTACAGCAAGTAAACGGGCGTCC...TTCAGTTTCTATTGGGAGTTTATACCAAGAGATTCTTCTAGATCTCATTGATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp ACTCCTTTGTACCCCACAATACATACTCTACAAAGAGTAACATTTGACAGAAAAGGACGCCCGTTTACTTaGTGTACGCTCGAAGTGTGG +
Preference number: 4 (lower is better)
Translates to: TPLYPTIHTLQRVTFDRKGRPFT*CTLEVW
Trigger: CCACACTTCGAGCGTACAGCAAGTAAACGGGCGTCC...TTTTCTGTCAAATGTTACTCTTTGTAGAGTATGTATTGTGGGGTACAAAGGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR GCA 90 bp GGATCAATGAGATCTAGAAGAATCTCTTGGTATAAACTCCCAATAGAAACTGAACTGAGTAATGGCAGGTaGAGAAGTGGGCCGAGGACT +
Preference number: 4 (lower is better)
Translates to: GSMRSRRISWYKLPIETELSNGR*RSGPRT
Trigger: AGTCCTCGGCCCACTTCTGCACCTGCCATTACTCAG...TTCAGTTTCTATTGGGAGTTTATACCAAGAGATTCTTCTAGATCTCATTGATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp TTCAACACAAGTACACGAACAAACAGGTCTGAAGTATATCAGGAAAACAAAGTACTGAGTAATGGCAGGTaGAGAAGTGGGCCGAGGACT +
Preference number: 4 (lower is better)
Translates to: FNTSTRTNRSEVYQENKVLSNGR*RSGPRT
Trigger: AGTCCTCGGCCCACTTCTGCACCTGCCATTACTCAG...TACTTTGTTTTCCTGATATACTTCAGACCTGTTTGTTCGTGTACTTGTGTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR GCA 90 bp GAGACATTAACCAAATCATCCATATTGGTACATTCAAGTGCCATAAAAAGCAAGCTGAGTAATGGCAGGTaGAGAAGTGGGCCGAGGACT +
Preference number: 4 (lower is better)
Translates to: ETLTKSSILVHSSAIKSKLSNGR*RSGPRT
Trigger: AGTCCTCGGCCCACTTCTGCACCTGCCATTACTCAG...CTTGCTTTTTATGGCACTTGAATGTACCAATATGGATGATTTGGTTAATGTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR GCA 90 bp ACTCCTTTGTACCCCACAATACATACTCTACAAAGAGTAACATTTGACAGAAAACTGAGTAATGGCAGGTaGAGAAGTGGGCCGAGGACT +
Preference number: 4 (lower is better)
Translates to: TPLYPTIHTLQRVTFDRKLSNGR*RSGPRT
Trigger: AGTCCTCGGCCCACTTCTGCACCTGCCATTACTCAG...TTTTCTGTCAAATGTTACTCTTTGTAGAGTATGTATTGTGGGGTACAAAGGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR GCA 90 bp GACATTAACCAAATCATCCATATTGGTACATTCAAGTGCCATAAAAAGCAAGCTCTGAGTAATGGCAGGTaGAGAAGTGGGCCGAGGACT +
Preference number: 4 (lower is better)
Translates to: DINQIIHIGTFKCHKKQALSNGR*RSGPRT
Trigger: AGTCCTCGGCCCACTTCTGCACCTGCCATTACTCAG...AGCTTGCTTTTTATGGCACTTGAATGTACCAATATGGATGATTTGGTTAATGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR GCA 90 bp GTCCAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATATTTTTCCACCTTCCATaGTTCTGTGGGCTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: VQLRSFYSPCNFCTLLSIFFHLP*FCGLWL
Trigger: GAGCCAGAGCCCACAGAAGCATGGAAGGTGGAAAAA...TATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTGGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644470.1
ENST00000644600.1
ENST00000646800.1
CDS-3UTR GCA 90 bp AGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAGAAGTTCAATGGTCTCCTGTGGGGATTTaGCCATTGATGTTAAGAGTT +
Preference number: 4 (lower is better)
Translates to: RGHHTAITQLKPRTEVQWSPVGI*PLMLRV
Trigger: AACTCTTAACATCAATGGGCAAATCCCCACAGGAGA...CCATTGAACTTCTGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR GCA 90 bp CAGATATCTGAAGCAACTTCCATGTCTTTGACCCAAAGAAGCTCCAAAAAGAAATTTGAGTTGTGGTGGTaGTGCTTGGGGTCTCAGATG +
Preference number: 4 (lower is better)
Translates to: QISEATSMSLTQRSSKKKFELWW*CLGSQM
Trigger: CATCTGAGACCCCAAGCAGCACCACCACAACTCAAA...TTTCTTTTTGGAGCTTCTTTGGGTCAAAGACATGGAAGTTGCTTCAGATATCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp GAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGTTTTTTGAGTTGTGGTGGTaGTGCTTGGGGTCTCAGATG +
Preference number: 4 (lower is better)
Translates to: ESLKSDYGRLASLSFCWFFELWW*CLGSQM
Trigger: CATCTGAGACCCCAAGCAGCACCACCACAACTCAAA...AAACCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTC
43% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp AATCTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGGTGCTGCTCCTTTaGCTCCTTGATGGCTTGTAC +
Preference number: 4 (lower is better)
Translates to: NLESLKSDYGRLASLSFCWVLLL*LLDGLY
Trigger: GTACAAGCCATCAAGGAGGCAAAGGAGCAGCACCCA...GCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp AAAAATGCACACACCCGAAATGAGTTCAAACCAGCCGAAACAAAACTCAGGCAGTTCCCCTGTGTGAAGTaGACACTCTCAAAACTAGAA +
Preference number: 4 (lower is better)
Translates to: KNAHTRNEFKPAETKLRQFPCVK*TLSKLE
Trigger: TTCTAGTTTTGAGAGTGTGCACTTCACACAGGGGAA...CTGCCTGAGTTTTGTTTCGGCTGGTTTGAACTCATTTCGGGTGTGTGCATTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp CTCTTTCCCTCCCTCCTGTTGTTCATGTCTCACATGGGTACCAAAAGAAAAATGTTCCCCTGTGTGAAGTaGACACTCTCAAAACTAGAA +
Preference number: 4 (lower is better)
Translates to: LFPSLLLFMSHMGTKRKMFPCVK*TLSKLE
Trigger: TTCTAGTTTTGAGAGTGTGCACTTCACACAGGGGAA...CATTTTTCTTTTGGTACCCATGTGAGACATGAACAACAGGAGGGAGGGAAAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp GGATCAATGAGATCTAGAAGAATCTCTTGGTATAAACTCCCAATAGAAACTGAAAGCCCCAGTGACTGCTaGCCGATACCCACTGTCTAT +
Preference number: 4 (lower is better)
Translates to: GSMRSRRISWYKLPIETESPSDC*PIPTVY
Trigger: ATAGACAGTGGGTATCGGGCAGCAGTCACTGGGGCT...TTCAGTTTCTATTGGGAGTTTATACCAAGAGATTCTTCTAGATCTCATTGATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp CTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGGAAGGACACCCATCTTaGTGGGCTTGTCCAAATCTA +
Preference number: 4 (lower is better)
Translates to: LESLKSDYGRLASLSFCWEGHPS*WACPNL
Trigger: TAGATTTGGACAAGCCCAGCAAGATGGGTGTCCTTC...CCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR GCA 90 bp GTCCAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATACTTTGGGCAGTCCATTaGTACTCCTTTGTACCCCAC +
Preference number: 4 (lower is better)
Translates to: VQLRSFYSPCNFCTLLSILWAVH*YSFVPH
Trigger: GTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAG...TATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTGGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR GCA 90 bp TCTATACACCAGGCAGGAAAAAGTTGTCTGTCCCTGTACAGCTCAGAAATACTCTCAACACTGGTTCTTTaGACACCCCTAAGTGATATG +
Preference number: 4 (lower is better)
Translates to: SIHQAGKSCLSLYSSEILSTLVL*TPLSDM
Trigger: CATATCACTTAGGGGTGTGCAAAGAACCAGTGTTGA...GAGTATTTCTGAGCTGTACAGGGACAGACAACTTTTTCCTGCCTGGTGTATAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR GCA 90 bp CAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAATACAAGTTTTTATTCCCCCTaGAATTTCTGTACTCTGCTA +
Preference number: 4 (lower is better)
Translates to: QKSWLWAVHCYSFVPHNTSFYSP*NFCTLL
Trigger: TAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACT...TGTATTGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR GCA 90 bp CAATGCAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACATGTAACACAATAGGGTaGTCAATAGATACCTTTTTG +
Preference number: 4 (lower is better)
Translates to: QCRKAGFGQSIATPLYPTCNTIG*SIDTFL
Trigger: CAAAAAGGTATCTATTGAGCACCCTATTGTGTTACA...TGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTGCATTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR GCA 90 bp GAAGTCAACATGCAAACAGAGGACACATACTTGTCACAAGTGAACTTGAGGTCAGCACGTTCCTGTGTCTaGTTTCACAGTAGAAGATCA +
Preference number: 4 (lower is better)
Translates to: EVNMQTEDTYLSQVNLRSARSCV*FHSRRS
Trigger: TGATCTTCTACTGTGAAAGCAGACACAGGAACGTGC...TGACCTCAAGTTCACTTGTGACAAGTATGTGTCCTCTGTTTGCATGTTGACTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR CCA 90 bp CCCTTGTCATGTGGTGTCTTGTGGGGAGAACGGCTCCTAAAAGTCAATTCCTTGTCTCTTCATCAAGACTaGTTCCAAATTCTATCTCTT +
Preference number: 4 (lower is better)
Translates to: PLSCGVLWGERLLKVNSLSLHQD*FQILSL
Trigger: AAGAGATAGAATTTGGAACCAGTCTTGATGAAGAGA...CAAGGAATTGACTTTTAGGAGCCGTTCTCCCCACAAGACACCACATGACAAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp GAAGCATGTAGCTGCAGAGACAGTTCTCAGAGGCTAATCATCTACTGGTGGCTCTCTCTTCATCAAGACTaGTTCCAAATTCTATCTCTT +
Preference number: 4 (lower is better)
Translates to: EACSCRDSSQRLIIYWWLSLHQD*FQILSL
Trigger: AAGAGATAGAATTTGGAACCAGTCTTGATGAAGAGA...GAGCCACCAGTAGATGATTAGCCTCTGAGAACTGTCTCTGCAGCTACATGCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648181.1
ENST00000648891.1
CDS-3UTR CCA 90 bp TCTATACACCAGGCAGGAAAAAGTTGTCTGTCCCTGTACAGCTCAGAAATACTCATGAAGATCCAAAGATaGGTCTGTTTTGAGTTCCGG +
Preference number: 4 (lower is better)
Translates to: SIHQAGKSCLSLYSSEILMKIQR*VCFEFR
Trigger: CCGGAACTCAAAACAGACCCATCTTTGGATCTTCAT...GAGTATTTCTGAGCTGTACAGGGACAGACAACTTTTTCCTGCCTGGTGTATAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CCA 90 bp AGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAGAAGTTCAATGGATGAAGATCCAAAGATaGGTCTGTTTTGAGTTCCGG +
Preference number: 4 (lower is better)
Translates to: RGHHTAITQLKPRTEVQWMKIQR*VCFEFR
Trigger: CCGGAACTCAAAACAGACCCATCTTTGGATCTTCAT...CCATTGAACTTCTGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CCA 90 bp GCTCAGCTTGCTCAGGTGGCTCGTCTTCCTTTTTCACTTCAGCCTTCACTGTTTCTTTTACTTCTATTTTaGAGCACTCTTCAAGTCCTT +
Preference number: 4 (lower is better)
Translates to: AQLAQVARLPFSLQPSLFLLLLF*STLQVL
Trigger: AAGGACTTGAAGAGTGCTCCAAAATAGAAGTAAAAG...AAACAGTGAAGGCTGAAGTGAAAAAGGAAGACGAGCCACCTGAGCAAGCTGAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
CDS-3UTR CCA 90 bp AGCTGCAGAGACAGTTCTCAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTTTGCGTTATCCCAAATaGCTAGACCAAAATAGTCTT +
Preference number: 4 (lower is better)
Translates to: SCRDSSQRLIIYWWLQIALRYPK*LDQNSL
Trigger: AAGACTATTTTGGTCTAGCCATTTGGGATAACGCAA...AGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTGAGAACTGTCTCTGCAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648891.1
CDS-3UTR CCA 90 bp GCCACATTCCTTGTCATTTGGGATGAAAGAAAGGCCCAGGATCAGACAGAAGTACCAGTTCAGACTGGATaGTGTAAGAACCTAATAATG +
Preference number: 4 (lower is better)
Translates to: ATFLVIWDERKAQDQTEVPVQTG*CKNLIM
Trigger: CATTATTAGGTTCTTACACCATCCAGTCTGAACTGG...TACTTCTGTCTGATCCTGGGCCTTTCTTTCATCCCAAATGACAAGGAATGTGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp GGATCAATGAGATCTAGAAGAATCTCTTGGTATAAACTCCCAATAGAAACTGAACACGCCATGGAGTTCTaGGTCGTAGTCTCCCAGTTC +
Preference number: 4 (lower is better)
Translates to: GSMRSRRISWYKLPIETEHAMEF*VVVSQF
Trigger: GAACTGGGAGACTACGACCCAGAACTCCATGGCGTG...TTCAGTTTCTATTGGGAGTTTATACCAAGAGATTCTTCTAGATCTCATTGATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp ACTCCTTTGTACCCCACAATACATACTCTACAAAGAGTAACATTTGACAGAAAACACGCCATGGAGTTCTaGGTCGTAGTCTCCCAGTTC +
Preference number: 4 (lower is better)
Translates to: TPLYPTIHTLQRVTFDRKHAMEF*VVVSQF
Trigger: GAACTGGGAGACTACGACCCAGAACTCCATGGCGTG...TTTTCTGTCAAATGTTACTCTTTGTAGAGTATGTATTGTGGGGTACAAAGGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CCA 90 bp CTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGCCTGAGCTGGAGTCATaGACCTGTATGACTTATGCA +
Preference number: 4 (lower is better)
Translates to: LESLKSDYGRLASLSFCWPELES*TCMTYA
Trigger: TGCATAAGTCATACAGGTCCATGACTCCAGCTCAGG...CCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp TTGGATCCTAGCGCAAGAAATTTGCTTTTGGGAATGGTGTCTGTAGATGTCAATCCTGAGCTGGAGTCATaGACCTGTATGACTTATGCA +
Preference number: 4 (lower is better)
Translates to: LDPSARNLLLGMVSVDVNPELES*TCMTYA
Trigger: TGCATAAGTCATACAGGTCCATGACTCCAGCTCAGG...ATTGACATCTACAGACACCATTCCCAAAAGCAAATTTCTTGCGCTAGGATCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
CDS-3UTR CCA 90 bp AGCTGCAGAGACAGTTCTCAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTCACTGTATCGAAATTTaGATCCTAGCGCAAGAAATT +
Preference number: 4 (lower is better)
Translates to: SCRDSSQRLIIYWWLQIAHCIEI*ILAQEI
Trigger: AATTTCTTGCGCTAGGATCCAAATTTCGATACAGTG...AGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTGAGAACTGTCTCTGCAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648181.1
ENST00000648891.1
CDS-3UTR CCA 90 bp GTCCAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATACTCAGCTTGCTCAGGTaGCTCGTCTTCCTTTTTCAC +
Preference number: 4 (lower is better)
Translates to: VQLRSFYSPCNFCTLLSILSLLR*LVFLFH
Trigger: GTGAAAAAGGAAGACGAGCCACCTGAGCAAGCTGAG...TATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTGGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644470.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR CCA 90 bp GGATCAATGAGATCTAGAAGAATCTCTTGGTATAAACTCCCAATAGAAACTGAACCTTCCATGCTTCTGTaGGCTCTGGCTCAGCTTGCT +
Preference number: 4 (lower is better)
Translates to: GSMRSRRISWYKLPIETEPSMLL*ALAQLA
Trigger: AGCAAGCTGAGCCAGAGCCCACAGAAGCATGGAAGG...TTCAGTTTCTATTGGGAGTTTATACCAAGAGATTCTTCTAGATCTCATTGATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
CDS-3UTR CCA 90 bp TTCAACACAAGTACACGAACAAACAGGTCTGAAGTATATCAGGAAAACAAAGTACCTTCCATGCTTCTGTaGGCTCTGGCTCAGCTTGCT +
Preference number: 4 (lower is better)
Translates to: FNTSTRTNRSEVYQENKVPSMLL*ALAQLA
Trigger: AGCAAGCTGAGCCAGAGCCCACAGAAGCATGGAAGG...TACTTTGTTTTCCTGATATACTTCAGACCTGTTTGTTCGTGTACTTGTGTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CCA 90 bp GTCCAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAGGTCACCATTTGAGGTaGGTACTGTCACCTCGATGT +
Preference number: 4 (lower is better)
Translates to: VQLRSFYSPCNFCTLLSIGHHLR*VLSPRC
Trigger: ACATCGAGGTGACAGTACCCACCTCAAATGGTGACC...TATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTGGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644470.1
ENST00000644600.1
ENST00000646800.1
CDS-3UTR CCA 90 bp CACTGTATCGAAATTTGGATCCTAGCGCAAGAAATTTGCTTTTGGGAATGGTGTGCAAGCTTCTGTGTTTaGTCACCATTTGAGGTGGGT +
Preference number: 4 (lower is better)
Translates to: HCIEIWILAQEICFWEWCASFCV*SPFEVG
Trigger: ACCCACCTCAAATGGTGACCAAACACAGAAGCTTGC...ACACCATTCCCAAAAGCAAATTTCTTGCGCTAGGATCCAAATTTCGATACAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648891.1
CDS-3UTR CCA 90 bp CTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGACTAGGCCGTGGTTCTaGTACAGACTCCATGAAGTT +
Preference number: 4 (lower is better)
Translates to: LESLKSDYGRLASLSFCWTRPWF*YRLHEV
Trigger: AACTTCATGGAGTCTGTACCAGAACCACGGCCTAGT...CCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
CDS-3UTR CCA 90 bp GAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGTTTCCATTCACTAGGCCGTaGTTCTGGTACAGACTCCAT +
Preference number: 4 (lower is better)
Translates to: ESLKSDYGRLASLSFCWFPFTRP*FWYRLH
Trigger: ATGGAGTCTGTACCAGAACCACGGCCTAGTGAATGG...AAACCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
CDS-3UTR CCA 90 bp ATTACTTTGGTGCTGCCAATCACTAATTGGGCAATGCCAATAATGAAGCATTCTCCATTCACTAGGCCGTaGTTCTGGTACAGACTCCAT +
Preference number: 4 (lower is better)
Translates to: ITLVLPITNWAMPIMKHSPFTRP*FWYRLH
Trigger: ATGGAGTCTGTACCAGAACCACGGCCTAGTGAATGG...AGAATGCTTCATTATTGGCATTGCCCAATTAGTGATTGGCAGCACCAAAGTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR CCA 90 bp CAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAGTCCCATTCACTAGGCCGTaGTTCTGGTACAGACTCCAT +
Preference number: 4 (lower is better)
Translates to: QLRSFYSPCNFCTLLSIVPFTRP*FWYRLH
Trigger: ATGGAGTCTGTACCAGAACCACGGCCTAGTGAATGG...GACTATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644470.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR CCA 90 bp TTAAACTTCAATGCAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTGGAAGGGTGAGTGAGTaGATAAGCGTTTATCCCATT +
Preference number: 4 (lower is better)
Translates to: LNFNAEKLALGSPLLLLCGRVSE*ISVYPI
Trigger: AATGGGATAAACGCTTATCCACTCACTCACCCTTCC...ACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTGCATTGAAGTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CCA 90 bp AGAAGTCAACATGCAAACAGAGGACACATACTTGTCACAAGTGAACTTGAGGTCGGAAGGGTGAGTGAGTaGATAAGCGTTTATCCCATT +
Preference number: 4 (lower is better)
Translates to: RSQHANRGHILVTSELEVGRVSE*ISVYPI
Trigger: AATGGGATAAACGCTTATCCACTCACTCACCCTTCC...GACCTCAAGTTCACTTGTGACAAGTATGTGTCCTCTGTTTGCATGTTGACTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CCA 90 bp AGTTCTCAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTCCTATAATTGCAGGAAGGGTGAGTGAGTaGATAAGCGTTTATCCCATT +
Preference number: 4 (lower is better)
Translates to: SSQRLIIYWWLQIAPIIAGRVSE*ISVYPI
Trigger: AATGGGATAAACGCTTATCCACTCACTCACCCTTCC...TGCAATTATAGGAGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTGAGAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648181.1
ENST00000648891.1
CDS-3UTR CCA 90 bp GAAGTCAACATGCAAACAGAGGACACATACTTGTCACAAGTGAACTTGAGGTCAGGAAGGGTGAGTGAGTaGATAAGCGTTTATCCCATT +
Preference number: 4 (lower is better)
Translates to: EVNMQTEDTYLSQVNLRSGRVSE*ISVYPI
Trigger: AATGGGATAAACGCTTATCCACTCACTCACCCTTCC...TGACCTCAAGTTCACTTGTGACAAGTATGTGTCCTCTGTTTGCATGTTGACTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CCA 90 bp TCCATTAGAGCTTTTGGCCCAAAGTGCCTATTTTTCTGTGAGATTTGGTCTCCTGGAAGGGTGAGTGAGTaGATAAGCGTTTATCCCATT +
Preference number: 4 (lower is better)
Translates to: SIRAFGPKCLFFCEIWSPGRVSE*ISVYPI
Trigger: AATGGGATAAACGCTTATCCACTCACTCACCCTTCC...AGGAGACCAAATCTCACAGAAAAATAGGCACTTTGGGCCAAAAGCTCTAATGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR CCA 90 bp GAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGTTTTGTGGTGGTGCTGCTTaGGGTCTCAGATGTGATAGT +
Preference number: 4 (lower is better)
Translates to: ESLKSDYGRLASLSFCWFCGGAA*GLRCDS
Trigger: ACTATCACATCTGAGACCCCAAGCAGCACCACCACA...AAACCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp GGATCAATGAGATCTAGAAGAATCTCTTGGTATAAACTCCCAATAGAAACTGAAATCTCGGTCTCCTGGTaGACGACCACCTTGGTCACT +
Preference number: 4 (lower is better)
Translates to: GSMRSRRISWYKLPIETEISVSW*TTTLVT
Trigger: AGTGACCAAGGTGGTCGTCCACCAGGAGACCGAGAT...TTCAGTTTCTATTGGGAGTTTATACCAAGAGATTCTTCTAGATCTCATTGATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp AATCTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCCTGGTTTCTCTTGGATaGGAGAAGGGCAGAGTTGGG +
Preference number: 4 (lower is better)
Translates to: NLESLKSDYGRLASLSFCLVSLG*EKGRVG
Trigger: CCCAACTCTGCCCTTCTCCCATCCAAGAGAAACCAG...GCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp CTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGTCCCGAAGAATTCCATaGACCCTGTCAGTGTCTGTT +
Preference number: 4 (lower is better)
Translates to: LESLKSDYGRLASLSFCWSRRIP*TLSVSV
Trigger: AACAGACACTGACAGGGTCCATGGAATTCTTCGGGA...CCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp AAAAATGCACACACCCGAAATGAGTTCAAACCAGCCGAAACAAAACTCAGGCAGTTTTTCTGTGAGATTTaGTCTCCTGAGATGGGAGCT +
Preference number: 4 (lower is better)
Translates to: KNAHTRNEFKPAETKLRQFFCEI*SPEMGA
Trigger: AGCTCCCATCTCAGGAGACCAAATCTCACAGAAAAA...CTGCCTGAGTTTTGTTTCGGCTGGTTTGAACTCATTTCGGGTGTGTGCATTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp GAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGTTTATACCCCTTGTCATGTaGTGTCTTGTGGGGAGAACG +
Preference number: 4 (lower is better)
Translates to: ESLKSDYGRLASLSFCWFIPLVM*CLVGRT
Trigger: CGTTCTCCCCACAAGACACCACATGACAAGGGGTAT...AAACCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp CAGATATCTGAAGCAACTTCCATGTCTTTGACCCAAAGAAGCTCCAAAAAGAAAATACCCCTTGTCATGTaGTGTCTTGTGGGGAGAACG +
Preference number: 4 (lower is better)
Translates to: QISEATSMSLTQRSSKKKIPLVM*CLVGRT
Trigger: CGTTCTCCCCACAAGACACCACATGACAAGGGGTAT...TTTCTTTTTGGAGCTTCTTTGGGTCAAAGACATGGAAGTTGCTTCAGATATCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp AATCTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCAAAATTTGCTGGGCGTaGTGGTGTGCGCCTGTCATC +
Preference number: 4 (lower is better)
Translates to: NLESLKSDYGRLASLSFCKICWA*WCAPVI
Trigger: GATGACAGGCGCACACCACCACGCCCAGCAAATTTT...GCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp GCCACATTCCTTGTCATTTGGGATGAAAGAAAGGCCCAGGATCAGACAGAAGTATCTATTTTAGGAAGCTaGAACTGGGATTCTAAGGAG +
Preference number: 4 (lower is better)
Translates to: ATFLVIWDERKAQDQTEVSILGS*NWDSKE
Trigger: CTCCTTAGAATCCCAGTTCCAGCTTCCTAAAATAGA...TACTTCTGTCTGATCCTGGGCCTTTCTTTCATCCCAAATGACAAGGAATGTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp CAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTCCTATAATTGCACTGGGTTCACAATTGGTCATGTaGACAAAGTACTCACTCCTT +
Preference number: 4 (lower is better)
Translates to: QRLIIYWWLQIAPIIALGSQLVM*TKYSLL
Trigger: AAGGAGTGAGTACTTTGTCCACATGACCAATTGTGA...ACCCAGTGCAATTATAGGAGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648181.1
ENST00000648891.1
CDS-3UTR CCA 90 bp AGCTGCAGAGACAGTTCTCAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTCTCCATTTTCACAATTaGTCATGTGGACAAAGTACT +
Preference number: 4 (lower is better)
Translates to: SCRDSSQRLIIYWWLQIALHFHN*SCGQST
Trigger: AGTACTTTGTCCACATGACCAATTGTGAAAATGGAG...AGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTGAGAACTGTCTCTGCAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648181.1
ENST00000648891.1
CDS-3UTR CCA 90 bp AGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAGAAGTTCAATGGTCTTCATTTTCTTGCTaGGGCAAGGCTCTTTCAGTA +
Preference number: 4 (lower is better)
Translates to: RGHHTAITQLKPRTEVQWSSFSC*GKALSV
Trigger: TACTGAAAGAGCCTTGCCCCAGCAAGAAAATGAAGA...CCATTGAACTTCTGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CCA 90 bp TCTATACACCAGGCAGGAAAAAGTTGTCTGTCCCTGTACAGCTCAGAAATACTCTCTTCATTTTCTTGCTaGGGCAAGGCTCTTTCAGTA +
Preference number: 4 (lower is better)
Translates to: SIHQAGKSCLSLYSSEILSSFSC*GKALSV
Trigger: TACTGAAAGAGCCTTGCCCCAGCAAGAAAATGAAGA...GAGTATTTCTGAGCTGTACAGGGACAGACAACTTTTTCCTGCCTGGTGTATAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CCA 90 bp GGCAGGAAAAAGTTGTCTGTCCCTGTACAGCTCAGAAATACTCATAAAAAGGCCTCTTCATTTTCTTGCTaGGGCAAGGCTCTTTCAGTA +
Preference number: 4 (lower is better)
Translates to: GRKKLSVPVQLRNTHKKASSFSC*GKALSV
Trigger: TACTGAAAGAGCCTTGCCCCAGCAAGAAAATGAAGA...GGCCTTTTTATGAGTATTTCTGAGCTGTACAGGGACAGACAACTTTTTCCTGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CCA 90 bp TTAAACTTCAATGCAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTGTGATCCTCAGGGATTaGAATAGAAACCTTGGGAAG +
Preference number: 4 (lower is better)
Translates to: LNFNAEKLALGSPLLLLCVILRD*NRNLGK
Trigger: CTTCCCAAGGTTTCTATTCCAATCCCTGAGGATCAC...ACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTGCATTGAAGTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CCA 90 bp AAAGTAGAGGTGGCACTTTTTGAGAGACTTGTGATCCTCAGGGATTGGAATAGAGTGATCCTCAGGGATTaGAATAGAAACCTTGGGAAG +
Preference number: 4 (lower is better)
Translates to: KVEVALFERLVILRDWNRVILRD*NRNLGK
Trigger: CTTCCCAAGGTTTCTATTCCAATCCCTGAGGATCAC...TCTATTCCAATCCCTGAGGATCACAAGTCTCTCAAAAAGTGCCACCTCTACTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR CCA 90 bp GAAGTCAACATGCAAACAGAGGACACATACTTGTCACAAGTGAACTTGAGGTCAGTGATCCTCAGGGATTaGAATAGAAACCTTGGGAAG +
Preference number: 4 (lower is better)
Translates to: EVNMQTEDTYLSQVNLRSVILRD*NRNLGK
Trigger: CTTCCCAAGGTTTCTATTCCAATCCCTGAGGATCAC...TGACCTCAAGTTCACTTGTGACAAGTATGTGTCCTCTGTTTGCATGTTGACTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CCA 90 bp CAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAATACAAGGAATACGAGGAGATaGAAAAGTACTAAAGTAGAG +
Preference number: 4 (lower is better)
Translates to: QKSWLWAVHCYSFVPHNTRNTRR*KSTKVE
Trigger: CTCTACTTTAGTACTTTTCCATCTCCTCGTATTCCT...TGTATTGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CCA 90 bp GTCCAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATACAGAAAAGCTGGCTTTaGGCAGTCCATTGCTACTCC +
Preference number: 4 (lower is better)
Translates to: VQLRSFYSPCNFCTLLSIQKSWL*AVHCYS
Trigger: GGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTG...TATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTGGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR CCA 90 bp GAGACATTAACCAAATCATCCATATTGGTACATTCAAGTGCCATAAAAAGCAAGAATTTCAGTCCTGGCTaGAGGCTAAGGGGCACCAGC +
Preference number: 4 (lower is better)
Translates to: ETLTKSSILVHSSAIKSKNFSPG*RLRGTS
Trigger: GCTGGTGCCCCTTAGCCTCCAGCCAGGACTGAAATT...CTTGCTTTTTATGGCACTTGAATGTACCAATATGGATGATTTGGTTAATGTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CCA 90 bp AAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAATACATACTCTTTTGAGTCTGCATTaGTCAGCTTCATCCAATACA +
Preference number: 4 (lower is better)
Translates to: KAGFGQSIATPLYPTIHTLLSLH*SASSNT
Trigger: TGTATTGGATGAAGCTGACCAATGCAGACTCAAAAG...AGTATGTATTGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636666.1
ENST00000644342.1
ENST00000646800.1
CDS-3UTR CCA 90 bp AGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAGAAGTTCAATGGAGTTCAAGGAATCACTaGCTTTCCCCTTGCTATGTT +
Preference number: 4 (lower is better)
Translates to: RGHHTAITQLKPRTEVQWSSRNH*LSPCYV
Trigger: AACATAGCAAGGGGAAAGCCAGTGATTCCTTGAACT...CCATTGAACTTCTGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR CCA 90 bp CAATGCAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACATTTGGCAATTTATCCTaGCAAAGTTTCTGTAACACA +
Preference number: 4 (lower is better)
Translates to: QCRKAGFGQSIATPLYPTFGNLS*QSFCNT
Trigger: TGTGTTACAGAAACTTTGCCAGGATAAATTGCCAAA...TGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTGCATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR CCA 90 bp CAGAGACAGTTCTCAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTCCTATCTAATCATCTACTGGTaGCTCCAAATAGCTCCTATA +
Preference number: 4 (lower is better)
Translates to: QRQFSEANHLLVAPNSSYLIIYW*LQIAPI
Trigger: TATAGGAGCTATTTGGAGCCACCAGTAGATGATTAG...ATAGGAGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTGAGAACTGTCTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648181.1
ENST00000648891.1
CDS-3UTR CCA 90 bp TCAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTCCTATAATTGCACTGGGCTAATCATCTACTGGTaGCTCCAAATAGCTCCTATA +
Preference number: 4 (lower is better)
Translates to: SEANHLLVAPNSSYNCTGLIIYW*LQIAPI
Trigger: TATAGGAGCTATTTGGAGCCACCAGTAGATGATTAG...CCCAGTGCAATTATAGGAGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648181.1
ENST00000648891.1
CDS-3UTR CCA 90 bp CCGTGGTTCTGGTACAGACTCCATGAAGTTCTTTTTCAGCTCACTGATGCTGGCACCTCTACTGGCTTATaGTCAGTTTATAAACATACA +
Preference number: 4 (lower is better)
Translates to: PWFWYRLHEVLFQLTDAGTSTGL*SVYKHT
Trigger: TGTATGTTTATAAACTGACCATAAGCCAGTAGAGGT...GCCAGCATCAGTGAGCTGAAAAAGAACTTCATGGAGTCTGTACCAGAACCACGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642643.1
ENST00000648891.1
3UTR CAA 72 bp TCACAGTATCAGATATCTGAAGCAACTTCCATGTCTTaGACCCAAAGAAGCTCCAAAAAGAAAGCAGGAGGG +
Preference number: 4 (lower is better)
Translates to: SQYQISEATSMS*TQRSSKKKAGG
Trigger: CCCTCCTGCTTTCTTTTTGGAGCTTCTTTGGGTCAAAGACATGGAAGTTGCTTCAGATATCTGATACTGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
3UTR CAA 72 bp AGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTaGTACCCCACAATACATACTCTACAAAGAGTAACA +
Preference number: 4 (lower is better)
Translates to: RKAGFGQSIATP*YPTIHTLQRVT
Trigger: TGTTACTCTTTGTAGAGTATGTATTGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
3UTR CAA 72 bp ATTTGGAATTCTGAATTCTCTGGCTTAGGGGCCTCCTaGGTTTACTATATAATTGTGGGGAACCAGTCCAGA +
Preference number: 4 (lower is better)
Translates to: IWNSEFSGLGAS*VYYIIVGNQSR
Trigger: TCTGGACTGGTTCCCCACAATTATATAGTAAACCAAGGAGGCCCCTAAGCCAGAGAATTCAGAATTCCAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000645184.1
ENST00000648181.1
3UTR CAA 72 bp CCACGCCCAGCCCATTTACGCTTTATGTTGCAAATATaGGCAGTGTTACCTTTAGGTAATACAAAGCTGGAA +
Preference number: 4 (lower is better)
Translates to: PRPAHLRFMLQI*AVLPLGNTKLE
Trigger: TTCCAGCTTTGTATTACCTAAAGGTAACACTGCCAATATTTGCAACATAAAGCGTAAATGGGCTGGGCGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644342.1
ENST00000646800.1
CDS-3UTR TCA 90 bp AATCTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCCTTCTGTTGGTGCTGTaGATTTTCGGCCTCAGTCAC +
Preference number: 4 (lower is better)
Translates to: NLESLKSDYGRLASLSFCLLLVL*IFGLSH
Trigger: GTGACTGAGGCCGAAAATTCACAGCACCAACAGAAG...GCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp ATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAGTCAACTTCTGTTGGTGCTGTaGATTTTCGGCCTCAGTCAC +
Preference number: 4 (lower is better)
Translates to: IEKFLFPLQFLYSAIHSQLLLVL*IFGLSH
Trigger: GTGACTGAGGCCGAAAATTCACAGCACCAACAGAAG...TTGACTATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000646800.1
CDS-3UTR TCA 90 bp AATCTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCAGGTTCTTGTTGGCCTaGGTTTATGGCTTCCTCACC +
Preference number: 4 (lower is better)
Translates to: NLESLKSDYGRLASLSFCRFLLA*VYGFLT
Trigger: GGTGAGGAAGCCATAAACTCAGGCCAACAAGAACCT...GCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp ATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAGTCAAAGGTTCTTGTTGGCCTaGGTTTATGGCTTCCTCACC +
Preference number: 4 (lower is better)
Translates to: IEKFLFPLQFLYSAIHSQRFLLA*VYGFLT
Trigger: GGTGAGGAAGCCATAAACTCAGGCCAACAAGAACCT...TTGACTATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000646800.1
CDS-3UTR TCA 90 bp GGATCAATGAGATCTAGAAGAATCTCTTGGTATAAACTCCCAATAGAAACTGAACAAGATTCCTCCTGCTaGGGTTCTTGTTGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: GSMRSRRISWYKLPIETEQDSSC*GSCWPE
Trigger: CTCAGGCCAACAAGAACCTCAGCAGGAGGAATCTTG...TTCAGTTTCTATTGGGAGTTTATACCAAGAGATTCTTCTAGATCTCATTGATCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp GACATTAACCAAATCATCCATATTGGTACATTCAAGTGCCATAAAAAGCAAGCTCAAGATTCCTCCTGCTaGGGTTCTTGTTGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: DINQIIHIGTFKCHKKQAQDSSC*GSCWPE
Trigger: CTCAGGCCAACAAGAACCTCAGCAGGAGGAATCTTG...AGCTTGCTTTTTATGGCACTTGAATGTACCAATATGGATGATTTGGTTAATGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp ATCTTAATTCAGAGAAGGGTTTATGTACAGATCTTGAGTAAATCTGTGTTCCAGCAAGATTCCTCCTGCTaGGGTTCTTGTTGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: ILIQRRVYVQILSKSVFQQDSSC*GSCWPE
Trigger: CTCAGGCCAACAAGAACCTCAGCAGGAGGAATCTTG...CTGGAACACAGATTTACTCAAGATCTGTACATAAACCCTTCTCTGAATTAAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp TTCAACACAAGTACACGAACAAACAGGTCTGAAGTATATCAGGAAAACAAAGTACAAGATTCCTCCTGCTaGGGTTCTTGTTGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: FNTSTRTNRSEVYQENKVQDSSC*GSCWPE
Trigger: CTCAGGCCAACAAGAACCTCAGCAGGAGGAATCTTG...TACTTTGTTTTCCTGATATACTTCAGACCTGTTTGTTCGTGTACTTGTGTTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp GAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGTTTAAGTCCTCTGCTTTCTaGTGTCCGCTCCTTGTTCTT +
Preference number: 4 (lower is better)
Translates to: ESLKSDYGRLASLSFCWFKSSAF*CPLLVL
Trigger: AAGAACAAGGAGCGGACATCAGAAAGCAGAGGACTT...AAACCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp GGACACATACTTGTCACAAGTGAACTTGAGGTCACAAAGCCATTGATTAAAAACAAGTCCTCTGCTTTCTaGTGTCCGCTCCTTGTTCTT +
Preference number: 4 (lower is better)
Translates to: GHILVTSELEVTKPLIKNKSSAF*CPLLVL
Trigger: AAGAACAAGGAGCGGACATCAGAAAGCAGAGGACTT...GTTTTTAATCAATGGCTTTGTGACCTCAAGTTCACTTGTGACAAGTATGTGTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp CACTGTATCGAAATTTGGATCCTAGCGCAAGAAATTTGCTTTTGGGAATGGTGTGAGATTTGGGCCTTTTaGGAAACGAGGAGAATAGTC +
Preference number: 4 (lower is better)
Translates to: HCIEIWILAQEICFWEWCEIWAF*ETRRIV
Trigger: GACTATTCTCCTCGTTTCTCAAAAGGCCCAAATCTC...ACACCATTCCCAAAAGCAAATTTCTTGCGCTAGGATCCAAATTTCGATACAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
CDS-3UTR TCA 90 bp AATCTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTCTTCCTCGGACACCTaGGATTTGGGCCTTTTGAGA +
Preference number: 4 (lower is better)
Translates to: NLESLKSDYGRLASLSFCSSSDT*DLGLLR
Trigger: TCTCAAAAGGCCCAAATCTCAGGTGTCCGAGGAAGA...GCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp AATCTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCAAGATGGGTCTGTTTTaGGTTCCGGTTCAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: NLESLKSDYGRLASLSFCKMGLF*VPVQEL
Trigger: CAGCTCCTGAACCGGAACTCAAAACAGACCCATCTT...GCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp AATTGTCCAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCAAGATGGGTCTGTTTTaGGTTCCGGTTCAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: NCPIEKFLFPLQFLYSAIKMGLF*VPVQEL
Trigger: CAGCTCCTGAACCGGAACTCAAAACAGACCCATCTT...GATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTGGACAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000646800.1
CDS-3UTR TCA 90 bp AAAGTAGAGGTGGCACTTTTTGAGAGACTTGTGATCCTCAGGGATTGGAATAGAGCACTGCTTAATGAATaGAGATCCAAAGATGGGTCT +
Preference number: 4 (lower is better)
Translates to: KVEVALFERLVILRDWNRALLNE*RSKDGS
Trigger: AGACCCATCTTTGGATCTTCATTCATTAAGCAGTGC...TCTATTCCAATCCCTGAGGATCACAAGTCTCTCAAAAAGTGCCACCTCTACTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000646800.1
CDS-3UTR TCA 90 bp GAAGTCAACATGCAAACAGAGGACACATACTTGTCACAAGTGAACTTGAGGTCAGCACTGCTTAATGAATaGAGATCCAAAGATGGGTCT +
Preference number: 4 (lower is better)
Translates to: EVNMQTEDTYLSQVNLRSALLNE*RSKDGS
Trigger: AGACCCATCTTTGGATCTTCATTCATTAAGCAGTGC...TGACCTCAAGTTCACTTGTGACAAGTATGTGTCCTCTGTTTGCATGTTGACTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp AGTTCTCAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTCCTATAATTGCAGCACTGCTTAATGAATaGAGATCCAAAGATGGGTCT +
Preference number: 4 (lower is better)
Translates to: SSQRLIIYWWLQIAPIIAALLNE*RSKDGS
Trigger: AGACCCATCTTTGGATCTTCATTCATTAAGCAGTGC...TGCAATTATAGGAGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTGAGAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648181.1
ENST00000648891.1
CDS-3UTR TCA 90 bp GAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGTTTAATCTGGATCTTCTCTaGGTTCTTCCTGAGCAGGCT +
Preference number: 4 (lower is better)
Translates to: ESLKSDYGRLASLSFCWFNLDLL*VLPEQA
Trigger: AGCCTGCTCAGGAAGAACTCAGAGAAGATCCAGATT...AAACCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp GTCCAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAAATCTGGATCTTCTCTaGGTTCTTCCTGAGCAGGCT +
Preference number: 4 (lower is better)
Translates to: VQLRSFYSPCNFCTLLSINLDLL*VLPEQA
Trigger: AGCCTGCTCAGGAAGAACTCAGAGAAGATCCAGATT...TATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTGGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000646800.1
CDS-3UTR TCA 90 bp CAGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAGAAGTTCAATGCTTCTTCCAAAAGATTaGGATGCTCACATACTCGTT +
Preference number: 4 (lower is better)
Translates to: QRASYSNNTVEAKDRSSMLLPKD*DAHILV
Trigger: AACGAGTATGTGAGCATCTCAATCTTTTGGAAGAAG...CATTGAACTTCTGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp CTTCATCCAATACAAGGGCTTGGCCATTCTCCTCTTAATCATTCTTACCCTATTTCAAGTTCCTTGGTCTaGTTCGGGGCCAGTTTAAAA +
Preference number: 4 (lower is better)
Translates to: LHPIQGLGHSPLNHSYPISSSLV*FGASLK
Trigger: TTTTAAACTGGCCCCGAATCAGACCAAGGAACTTGA...AATAGGGTAAGAATGATTAAGAGGAGAATGGCCAAGCCCTTGTATTGGATGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636666.1
ENST00000644342.1
ENST00000646800.1
CDS-3UTR TCA 90 bp GAAGTCAACATGCAAACAGAGGACACATACTTGTCACAAGTGAACTTGAGGTCAACTTATGCAGTTCCATaGCCTTCTCTTCAAGTTCCT +
Preference number: 4 (lower is better)
Translates to: EVNMQTEDTYLSQVNLRSTYAVP*PSLQVP
Trigger: AGGAACTTGAAGAGAAGGTCATGGAACTGCATAAGT...TGACCTCAAGTTCACTTGTGACAAGTATGTGTCCTCTGTTTGCATGTTGACTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp AGTTCTCAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTCCTATAATTGCAACTTATGCAGTTCCATaGCCTTCTCTTCAAGTTCCT +
Preference number: 4 (lower is better)
Translates to: SSQRLIIYWWLQIAPIIATYAVP*PSLQVP
Trigger: AGGAACTTGAAGAGAAGGTCATGGAACTGCATAAGT...TGCAATTATAGGAGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTGAGAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648181.1
ENST00000648891.1
CDS-3UTR TCA 90 bp CTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGAGTCATGGACCTGTATaGCTTATGCAGTTCCATGAC +
Preference number: 4 (lower is better)
Translates to: LESLKSDYGRLASLSFCWSHGPV*LMQFHD
Trigger: GTCATGGAACTGCATAAGTCATACAGGTCCATGACT...CCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp CTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGAGCAGACACCTAGGATaGTATCTACTCCTTCCAAGT +
Preference number: 4 (lower is better)
Translates to: LESLKSDYGRLASLSFCWSRHLG*YLLLPS
Trigger: ACTTGGAAGGAGTAGATATCATCCTAGGTGTCTGCT...CCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp TCCATTAGAGCTTTTGGCCCAAAGTGCCTATTTTTCTGTGAGATTTGGTCTCCTGGTAACTGGGAAGTTTaGATCCGATGGTACTTTCAT +
Preference number: 4 (lower is better)
Translates to: SIRAFGPKCLFFCEIWSPGNWEV*IRWYFH
Trigger: ATGAAAGTACCATCGGATTCAAACTTCCCAGTTACC...AGGAGACCAAATCTCACAGAAAAATAGGCACTTTGGGCCAAAAGCTCTAATGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp GAAGTCAACATGCAAACAGAGGACACATACTTGTCACAAGTGAACTTGAGGTCAGGTAACTGGGAAGTTTaGATCCGATGGTACTTTCAT +
Preference number: 4 (lower is better)
Translates to: EVNMQTEDTYLSQVNLRSGNWEV*IRWYFH
Trigger: ATGAAAGTACCATCGGATTCAAACTTCCCAGTTACC...TGACCTCAAGTTCACTTGTGACAAGTATGTGTCCTCTGTTTGCATGTTGACTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp ACTATCAAGATCAGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAGGTAACTGGGAAGTTTaGATCCGATGGTACTTTCAT +
Preference number: 4 (lower is better)
Translates to: TIKIRGHHTAITQLKPRTGNWEV*IRWYFH
Trigger: ATGAAAGTACCATCGGATTCAAACTTCCCAGTTACC...TGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCTGATCTTGATAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp GCCACATTCCTTGTCATTTGGGATGAAAGAAAGGCCCAGGATCAGACAGAAGTAAATCTGAAAAACGTGTaGTGTTCTACACAGACTTTC +
Preference number: 4 (lower is better)
Translates to: ATFLVIWDERKAQDQTEVNLKNV*CSTQTF
Trigger: GAAAGTCTGTGTAGAACATCACACGTTTTTCAGATT...TACTTCTGTCTGATCCTGGGCCTTTCTTTCATCCCAAATGACAAGGAATGTGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp AAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAATACATACTAATCTGAAAAACGTGTaGTGTTCTACACAGACTTTC +
Preference number: 4 (lower is better)
Translates to: KAGFGQSIATPLYPTIHTNLKNV*CSTQTF
Trigger: GAAAGTCTGTGTAGAACATCACACGTTTTTCAGATT...AGTATGTATTGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp ATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAGTCAATGTTTGGTCACCATTTaGGGTGGGTACTGTCACCTC +
Preference number: 4 (lower is better)
Translates to: IEKFLFPLQFLYSAIHSQCLVTI*GGYCHL
Trigger: GAGGTGACAGTACCCACCTCAAATGGTGACCAAACA...TTGACTATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644470.1
ENST00000644600.1
ENST00000646800.1
CDS-3UTR TCA 90 bp AAAAATGCACACACCCGAAATGAGTTCAAACCAGCCGAAACAAAACTCAGGCAGTCTTTTTCAGCTCACTaGTGCTGGCATGATGTTTTT +
Preference number: 4 (lower is better)
Translates to: KNAHTRNEFKPAETKLRQSFSAH*CWHDVF
Trigger: AAAAACATCATGCCAGCATCAGTGAGCTGAAAAAGA...CTGCCTGAGTTTTGTTTCGGCTGGTTTGAACTCATTTCGGGTGTGTGCATTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR TCA 90 bp CAGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAGAAGTTCAATGTCTTTTTCAGCTCACTaGTGCTGGCATGATGTTTTT +
Preference number: 4 (lower is better)
Translates to: QRASYSNNTVEAKDRSSMSFSAH*CWHDVF
Trigger: AAAAACATCATGCCAGCATCAGTGAGCTGAAAAAGA...CATTGAACTTCTGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp CTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGCTGGTACAGACTCCATaGAGTTCTTTTTCAGCTCAC +
Preference number: 4 (lower is better)
Translates to: LESLKSDYGRLASLSFCWLVQTP*SSFSAH
Trigger: GTGAGCTGAAAAAGAACTTCATGGAGTCTGTACCAG...CCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
CDS-3UTR TCA 90 bp AATCTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCGTTCGGAAGGGTGAGTaGGTGGATAAGCGTTTATCC +
Preference number: 4 (lower is better)
Translates to: NLESLKSDYGRLASLSFCVRKGE*VDKRLS
Trigger: GGATAAACGCTTATCCACTCACTCACCCTTCCGAAC...GCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
CDS-3UTR TCA 90 bp ATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAGTCAAGTTCGGAAGGGTGAGTaGGTGGATAAGCGTTTATCC +
Preference number: 4 (lower is better)
Translates to: IEKFLFPLQFLYSAIHSQVRKGE*VDKRLS
Trigger: GGATAAACGCTTATCCACTCACTCACCCTTCCGAAC...TTGACTATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644470.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR TCA 90 bp AATTGTCCAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCGTTCGGAAGGGTGAGTaGGTGGATAAGCGTTTATCC +
Preference number: 4 (lower is better)
Translates to: NCPIEKFLFPLQFLYSAIVRKGE*VDKRLS
Trigger: GGATAAACGCTTATCCACTCACTCACCCTTCCGAAC...GATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTGGACAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644470.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR TCA 90 bp CTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGACAGTCTTGGTAATTTaGGTTGTGGTGGTGCTGCTT +
Preference number: 4 (lower is better)
Translates to: LESLKSDYGRLASLSFCWTVLVI*VVVVLL
Trigger: AAGCAGCACCACCACAACTCAAATTACCAAGACTGT...CCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp CTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGGCTTGTACAAGGACCTaGTCATGGTCAATATCAGCA +
Preference number: 4 (lower is better)
Translates to: LESLKSDYGRLASLSFCWACTRT*SWSISA
Trigger: TGCTGATATTGACCATGATCAGGTCCTTGTACAAGC...CCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp GGATCAATGAGATCTAGAAGAATCTCTTGGTATAAACTCCCAATAGAAACTGAAGCTCCTTTGCCTCCTTaGTGGCTTGTACAAGGACCT +
Preference number: 4 (lower is better)
Translates to: GSMRSRRISWYKLPIETEAPLPP*WLVQGP
Trigger: AGGTCCTTGTACAAGCCATCAAGGAGGCAAAGGAGC...TTCAGTTTCTATTGGGAGTTTATACCAAGAGATTCTTCTAGATCTCATTGATCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp TCCATTAGAGCTTTTGGCCCAAAGTGCCTATTTTTCTGTGAGATTTGGTCTCCTCAACTTCCATGTCTTTaGCCCAAAGAAGCTCCAAAA +
Preference number: 4 (lower is better)
Translates to: SIRAFGPKCLFFCEIWSPQLPCL*PKEAPK
Trigger: TTTTGGAGCTTCTTTGGGTCAAAGACATGGAAGTTG...AGGAGACCAAATCTCACAGAAAAATAGGCACTTTGGGCCAAAAGCTCTAATGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp TCCATTAGAGCTTTTGGCCCAAAGTGCCTATTTTTCTGTGAGATTTGGTCTCCTACCAGCCTAACAAGGTaGAATCCCGTTTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: SIRAFGPKCLFFCEIWSPTSLTR*NPVSTK
Trigger: TTTAGTAGAAACGGGATTTCACCTTGTTAGGCTGGT...AGGAGACCAAATCTCACAGAAAAATAGGCACTTTGGGCCAAAAGCTCTAATGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp CTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGTGGCTTCTAAGAGCCTaGAAGGCATTAGAGCTCTTT +
Preference number: 4 (lower is better)
Translates to: LESLKSDYGRLASLSFCWWLLRA*KALELF
Trigger: AAAGAGCTCTAATGCCTTTCAGGCTCTTAGAAGCCA...CCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR TCA 90 bp CAGAGACAGTTCTCAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTCCTATTTTTTGATCTCCTCTTaGCTCTTGTCTAAATCCTTC +
Preference number: 4 (lower is better)
Translates to: QRQFSEANHLLVAPNSSYFLISS*LLSKSF
Trigger: GAAGGATTTAGACAAGAGTCAAGAGGAGATCAAAAA...ATAGGAGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTGAGAACTGTCTCTG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648181.1
CDS-3UTR TCA 90 bp CAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTCCTATAATTGCACTGGGTTTTTTGATCTCCTCTTaGCTCTTGTCTAAATCCTTC +
Preference number: 4 (lower is better)
Translates to: QRLIIYWWLQIAPIIALGFLISS*LLSKSF
Trigger: GAAGGATTTAGACAAGAGTCAAGAGGAGATCAAAAA...ACCCAGTGCAATTATAGGAGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648181.1
CDS-3UTR TCA 90 bp AGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAGAAGTTCAATGGTTTTTGAGAGACTTGTaGTCCTCAGGGATTGGAATA +
Preference number: 4 (lower is better)
Translates to: RGHHTAITQLKPRTEVQWFLRDL*SSGIGI
Trigger: TATTCCAATCCCTGAGGATCACAAGTCTCTCAAAAA...CCATTGAACTTCTGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp GTCCAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAAGAGGTGGCACTTTTTaGGAGACTTGTGATCCTCAG +
Preference number: 4 (lower is better)
Translates to: VQLRSFYSPCNFCTLLSIRGGTF*ETCDPQ
Trigger: CTGAGGATCACAAGTCTCTCAAAAAGTGCCACCTCT...TATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTGGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR TCA 90 bp GGACACATACTTGTCACAAGTGAACTTGAGGTCACAAAGCCATTGATTAAAAACAGAGGTGGCACTTTTTaGGAGACTTGTGATCCTCAG +
Preference number: 4 (lower is better)
Translates to: GHILVTSELEVTKPLIKNRGGTF*ETCDPQ
Trigger: CTGAGGATCACAAGTCTCTCAAAAAGTGCCACCTCT...GTTTTTAATCAATGGCTTTGTGACCTCAAGTTCACTTGTGACAAGTATGTGTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp GGACACATACTTGTCACAAGTGAACTTGAGGTCACAAAGCCATTGATTAAAAACGAGCACCCTGTTTTCTaGTCACAGAAAGACCAACCA +
Preference number: 4 (lower is better)
Translates to: GHILVTSELEVTKPLIKNEHPVF*SQKDQP
Trigger: TGGTTGGTCTTTCTGTGATCAGAAAACAGGGTGCTC...GTTTTTAATCAATGGCTTTGTGACCTCAAGTTCACTTGTGACAAGTATGTGTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp AGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAGTCAAGACAGAGCACCCTGTTTTCTaGTCACAGAAAGACCAACCA +
Preference number: 4 (lower is better)
Translates to: RSFYSPCNFCTLLSIVKTEHPVF*SQKDQP
Trigger: TGGTTGGTCTTTCTGTGATCAGAAAACAGGGTGCTC...TGTCTTGACTATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR TCA 90 bp TTCAACACAAGTACACGAACAAACAGGTCTGAAGTATATCAGGAAAACAAAGTAGCATGTGAGTTGTCCTaGAGAGAGAGAGAGTGCCCA +
Preference number: 4 (lower is better)
Translates to: FNTSTRTNRSEVYQENKVACELS*RERECP
Trigger: TGGGCACTCTCTCTCTCTTCAGGACAACTCACATGC...TACTTTGTTTTCCTGATATACTTCAGACCTGTTTGTTCGTGTACTTGTGTTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp ACTCCTTTGTACCCCACAATACATACTCTACAAAGAGTAACATTTGACAGAAAAGCATGTGAGTTGTCCTaGAGAGAGAGAGAGTGCCCA +
Preference number: 4 (lower is better)
Translates to: TPLYPTIHTLQRVTFDRKACELS*RERECP
Trigger: TGGGCACTCTCTCTCTCTTCAGGACAACTCACATGC...TTTTCTGTCAAATGTTACTCTTTGTAGAGTATGTATTGTGGGGTACAAAGGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp ATCTTAATTCAGAGAAGGGTTTATGTACAGATCTTGAGTAAATCTGTGTTCCAGGCATGTGAGTTGTCCTaGAGAGAGAGAGAGTGCCCA +
Preference number: 4 (lower is better)
Translates to: ILIQRRVYVQILSKSVFQACELS*RERECP
Trigger: TGGGCACTCTCTCTCTCTTCAGGACAACTCACATGC...CTGGAACACAGATTTACTCAAGATCTGTACATAAACCCTTCTCTGAATTAAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp TTGGCAGTGTTACCTTTAGGTAATACAAAGCTGGAATGCCCAATATTTTTCCTCAACAGGTTAGGCATGTaGGTTGTCCTGAAGAGAGAG +
Preference number: 4 (lower is better)
Translates to: LAVLPLGNTKLECPIFFLNRLGM*VVLKRE
Trigger: CTCTCTCTTCAGGACAACTCACATGCCTAACCTGTT...GAGGAAAAATATTGGGCATTCCAGCTTTGTATTACCTAAAGGTAACACTGCCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000636666.1
ENST00000644342.1
ENST00000646800.1
CDS-3UTR TCA 90 bp ATTGTCCAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCAACAGGTTAGGCATGTaGGTTGTCCTGAAGAGAGAG +
Preference number: 4 (lower is better)
Translates to: IVQLRSFYSPCNFCTLLSNRLGM*VVLKRE
Trigger: CTCTCTCTTCAGGACAACTCACATGCCTAACCTGTT...GGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTGGACAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR TCA 90 bp TTAAACTTCAATGCAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTTGTGATGGTATCTTTTaGGTCTGCATTGGTCAGCTT +
Preference number: 4 (lower is better)
Translates to: LNFNAEKLALGSPLLLLCCDGIF*VCIGQL
Trigger: AAGCTGACCAATGCAGACTCAAAAGATACCATCACA...ACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTGCATTGAAGTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636666.1
ENST00000644342.1
ENST00000646800.1
CDS-3UTR TCA 90 bp AAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAATACATACTGACAGATGTTATCTATaGAAGGAAAAACTTGGCTCT +
Preference number: 4 (lower is better)
Translates to: KAGFGQSIATPLYPTIHTDRCYL*KEKLGS
Trigger: AGAGCCAAGTTTTTCCTTTCATAGATAACATCTGTC...AGTATGTATTGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR TCA 90 bp CAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTCCTATAATTGCACTGGGTGTACACCACTATACCTaGCTAATTTTTGTAGAGATG +
Preference number: 4 (lower is better)
Translates to: QRLIIYWWLQIAPIIALGVHHYT*LIFVEM
Trigger: CATCTCTACAAAAATTAGTCAGGTATAGTGGTGTAC...ACCCAGTGCAATTATAGGAGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000645184.1
ENST00000648181.1
CDS-3UTR GCA 90 bp AGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAGAAGTTCAATGGATTATCTCCTTCAGCTaGTGTTTGACAAGATTCCTC +
Preference number: 4 (lower is better)
Translates to: RGHHTAITQLKPRTEVQWIISFS*CLTRFL
Trigger: GAGGAATCTTGTCAAACAGCAGCTGAAGGAGATAAT...CCATTGAACTTCTGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR GCA 90 bp CTCTTTCCCTCCCTCCTGTTGTTCATGTCTCACATGGGTACCAAAAGAAAAATGATTATCTCCTTCAGCTaGTGTTTGACAAGATTCCTC +
Preference number: 4 (lower is better)
Translates to: LFPSLLLFMSHMGTKRKMIISFS*CLTRFL
Trigger: GAGGAATCTTGTCAAACAGCAGCTGAAGGAGATAAT...CATTTTTCTTTTGGTACCCATGTGAGACATGAACAACAGGAGGGAGGGAAAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp GGCAGGAAAAAGTTGTCTGTCCCTGTACAGCTCAGAAATACTCATAAAAAGGCCATTATCTCCTTCAGCTaGTGTTTGACAAGATTCCTC +
Preference number: 4 (lower is better)
Translates to: GRKKLSVPVQLRNTHKKAIISFS*CLTRFL
Trigger: GAGGAATCTTGTCAAACAGCAGCTGAAGGAGATAAT...GGCCTTTTTATGAGTATTTCTGAGCTGTACAGGGACAGACAACTTTTTCCTGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR GCA 90 bp AATCTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCGTCGTGAAAGTCCTCTaGTTTCTGATGTCCGCTCCT +
Preference number: 4 (lower is better)
Translates to: NLESLKSDYGRLASLSFCVVKVL*FLMSAP
Trigger: AGGAGCGGACATCAGAAAGCAGAGGACTTTCACGAC...GCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp ATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAGTCAAGTCGTGAAAGTCCTCTaGTTTCTGATGTCCGCTCCT +
Preference number: 4 (lower is better)
Translates to: IEKFLFPLQFLYSAIHSQVVKVL*FLMSAP
Trigger: AGGAGCGGACATCAGAAAGCAGAGGACTTTCACGAC...TTGACTATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000646800.1
CDS-3UTR GCA 90 bp GAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGTTTCTGACTCTACTTCTTTaGCTTCTTCCTCGGACACCT +
Preference number: 4 (lower is better)
Translates to: ESLKSDYGRLASLSFCWFLTLLL*LLPRTP
Trigger: AGGTGTCCGAGGAAGAAGGCAAAGAAGTAGAGTCAG...AAACCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp CAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAGTCCTGACTCTACTTCTTTaGCTTCTTCCTCGGACACCT +
Preference number: 4 (lower is better)
Translates to: QLRSFYSPCNFCTLLSIVLTLLL*LLPRTP
Trigger: AGGTGTCCGAGGAAGAAGGCAAAGAAGTAGAGTCAG...GACTATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000646800.1
CDS-3UTR GCA 90 bp TTGGCAGTGTTACCTTTAGGTAATACAAAGCTGGAATGCCCAATATTTTTCCTCCTGACTCTACTTCTTTaGCTTCTTCCTCGGACACCT +
Preference number: 4 (lower is better)
Translates to: LAVLPLGNTKLECPIFFLLTLLL*LLPRTP
Trigger: AGGTGTCCGAGGAAGAAGGCAAAGAAGTAGAGTCAG...GAGGAAAAATATTGGGCATTCCAGCTTTGTATTACCTAAAGGTAACACTGCCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644342.1
ENST00000646800.1
CDS-3UTR GCA 90 bp AAAAATGCACACACCCGAAATGAGTTCAAACCAGCCGAAACAAAACTCAGGCAGGCTGTGTTTCTGCACTaGTTAATGAATGAAGATCCA +
Preference number: 4 (lower is better)
Translates to: KNAHTRNEFKPAETKLRQAVFLH*LMNEDP
Trigger: TGGATCTTCATTCATTAAGCAGTGCAGAAACACAGC...CTGCCTGAGTTTTGTTTCGGCTGGTTTGAACTCATTTCGGGTGTGTGCATTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp CTCTTTCCCTCCCTCCTGTTGTTCATGTCTCACATGGGTACCAAAAGAAAAATGGCTGTGTTTCTGCACTaGTTAATGAATGAAGATCCA +
Preference number: 4 (lower is better)
Translates to: LFPSLLLFMSHMGTKRKMAVFLH*LMNEDP
Trigger: TGGATCTTCATTCATTAAGCAGTGCAGAAACACAGC...CATTTTTCTTTTGGTACCCATGTGAGACATGAACAACAGGAGGGAGGGAAAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp TCCATTAGAGCTTTTGGCCCAAAGTGCCTATTTTTCTGTGAGATTTGGTCTCCTCCAACAAAGAAACCTTaGAGTGCATGTTCCTGTGTT +
Preference number: 4 (lower is better)
Translates to: SIRAFGPKCLFFCEIWSPPTKKP*SACSCV
Trigger: AACACAGGAACATGCACTGCAAGGTTTCTTTGTTGG...AGGAGACCAAATCTCACAGAAAAATAGGCACTTTGGGCCAAAAGCTCTAATGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp ACTATCAAGATCAGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACACCAACAAAGAAACCTTaGAGTGCATGTTCCTGTGTT +
Preference number: 4 (lower is better)
Translates to: TIKIRGHHTAITQLKPRTPTKKP*SACSCV
Trigger: AACACAGGAACATGCACTGCAAGGTTTCTTTGTTGG...TGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCTGATCTTGATAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR GCA 90 bp GAATCCGATGGTACTTTCATACTGCTCTTGCTCTCCAGGCCGAATCTTGATGAATCCAAAAGATTGAGATaGTCACATACTCGTTTAAGC +
Preference number: 4 (lower is better)
Translates to: ESDGTFILLLLSRPNLDESKRLR*SHTRLS
Trigger: GCTTAAACGAGTATGTGAGCATCTCAATCTTTTGGA...TTCATCAAGATTCGGCCTGGAGAGCAAGAGCAGTATGAAAGTACCATCGGATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642643.1
ENST00000643155.1
CDS-3UTR GCA 90 bp CAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTCCTATAATTGCACTGGGTTCCAAAAGATTGAGATaGTCACATACTCGTTTAAGC +
Preference number: 4 (lower is better)
Translates to: QRLIIYWWLQIAPIIALGSKRLR*SHTRLS
Trigger: GCTTAAACGAGTATGTGAGCATCTCAATCTTTTGGA...ACCCAGTGCAATTATAGGAGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648891.1
CDS-3UTR GCA 90 bp AAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAATACATACTTCCAAAAGATTGAGATaGTCACATACTCGTTTAAGC +
Preference number: 4 (lower is better)
Translates to: KAGFGQSIATPLYPTIHTSKRLR*SHTRLS
Trigger: GCTTAAACGAGTATGTGAGCATCTCAATCTTTTGGA...AGTATGTATTGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR GCA 90 bp ACTATCAAGATCAGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAGACCTGTATGACTTATaGAGTTCCATGACCTTCTCT +
Preference number: 4 (lower is better)
Translates to: TIKIRGHHTAITQLKPRTDLYDL*SSMTFS
Trigger: AGAGAAGGTCATGGAACTGCATAAGTCATACAGGTC...TGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCTGATCTTGATAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR GCA 90 bp TTAAACTTCAATGCAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTGACCTGTATGACTTATaGAGTTCCATGACCTTCTCT +
Preference number: 4 (lower is better)
Translates to: LNFNAEKLALGSPLLLLCDLYDL*SSMTFS
Trigger: AGAGAAGGTCATGGAACTGCATAAGTCATACAGGTC...ACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTGCATTGAAGTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR GCA 90 bp AGTTCTCAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTCCTATAATTGCAGACCTGTATGACTTATaGAGTTCCATGACCTTCTCT +
Preference number: 4 (lower is better)
Translates to: SSQRLIIYWWLQIAPIIADLYDL*SSMTFS
Trigger: AGAGAAGGTCATGGAACTGCATAAGTCATACAGGTC...TGCAATTATAGGAGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTGAGAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648181.1
ENST00000648891.1
CDS-3UTR GCA 90 bp TCTATACACCAGGCAGGAAAAAGTTGTCTGTCCCTGTACAGCTCAGAAATACTCTCCTTCCAAGTCCTTTaGTTTATGAAGATCAACTCC +
Preference number: 4 (lower is better)
Translates to: SIHQAGKSCLSLYSSEILSFQVL*FMKINS
Trigger: GGAGTTGATCTTCATAAAGCAAAGGACTTGGAAGGA...GAGTATTTCTGAGCTGTACAGGGACAGACAACTTTTTCCTGCCTGGTGTATAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR GCA 90 bp GGCAGGAAAAAGTTGTCTGTCCCTGTACAGCTCAGAAATACTCATAAAAAGGCCTCCTTCCAAGTCCTTTaGTTTATGAAGATCAACTCC +
Preference number: 4 (lower is better)
Translates to: GRKKLSVPVQLRNTHKKASFQVL*FMKINS
Trigger: GGAGTTGATCTTCATAAAGCAAAGGACTTGGAAGGA...GGCCTTTTTATGAGTATTTCTGAGCTGTACAGGGACAGACAACTTTTTCCTGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR GCA 90 bp GAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGTTTATGGTACTTTCATACTaGTCTTGCTCTCCAGGCCGA +
Preference number: 4 (lower is better)
Translates to: ESLKSDYGRLASLSFCWFMVLSY*SCSPGR
Trigger: TCGGCCTGGAGAGCAAGAGCAGTATGAAAGTACCAT...AAACCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp TTGGCAGTGTTACCTTTAGGTAATACAAAGCTGGAATGCCCAATATTTTTCCTCATGGTACTTTCATACTaGTCTTGCTCTCCAGGCCGA +
Preference number: 4 (lower is better)
Translates to: LAVLPLGNTKLECPIFFLMVLSY*SCSPGR
Trigger: TCGGCCTGGAGAGCAAGAGCAGTATGAAAGTACCAT...GAGGAAAAATATTGGGCATTCCAGCTTTGTATTACCTAAAGGTAACACTGCCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000636666.1
ENST00000644342.1
ENST00000646800.1
CDS-3UTR GCA 90 bp GGACACATACTTGTCACAAGTGAACTTGAGGTCACAAAGCCATTGATTAAAAACATGGTACTTTCATACTaGTCTTGCTCTCCAGGCCGA +
Preference number: 4 (lower is better)
Translates to: GHILVTSELEVTKPLIKNMVLSY*SCSPGR
Trigger: TCGGCCTGGAGAGCAAGAGCAGTATGAAAGTACCAT...GTTTTTAATCAATGGCTTTGTGACCTCAAGTTCACTTGTGACAAGTATGTGTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR GCA 90 bp ATTGTCCAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATGGTACTTTCATACTaGTCTTGCTCTCCAGGCCGA +
Preference number: 4 (lower is better)
Translates to: IVQLRSFYSPCNFCTLLSMVLSY*SCSPGR
Trigger: TCGGCCTGGAGAGCAAGAGCAGTATGAAAGTACCAT...GGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTGGACAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR GCA 90 bp TCCATTAGAGCTTTTGGCCCAAAGTGCCTATTTTTCTGTGAGATTTGGTCTCCTCTAGCGCAAGAAATTTaGTTTTGGGAATGGTGTCTG +
Preference number: 4 (lower is better)
Translates to: SIRAFGPKCLFFCEIWSPLAQEI*FWEWCL
Trigger: CAGACACCATTCCCAAAAGCAAATTTCTTGCGCTAG...AGGAGACCAAATCTCACAGAAAAATAGGCACTTTGGGCCAAAAGCTCTAATGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp AGAAGTCAACATGCAAACAGAGGACACATACTTGTCACAAGTGAACTTGAGGTCCTAGCGCAAGAAATTTaGTTTTGGGAATGGTGTCTG +
Preference number: 4 (lower is better)
Translates to: RSQHANRGHILVTSELEVLAQEI*FWEWCL
Trigger: CAGACACCATTCCCAAAAGCAAATTTCTTGCGCTAG...GACCTCAAGTTCACTTGTGACAAGTATGTGTCCTCTGTTTGCATGTTGACTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR GCA 90 bp AATTGTCCAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCTTTTTCCACCTTCCATaGTTCTGTGGGCTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: NCPIEKFLFPLQFLYSAIFFHLP*FCGLWL
Trigger: GAGCCAGAGCCCACAGAAGCATGGAAGGTGGAAAAA...GATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTGGACAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644470.1
ENST00000644600.1
ENST00000646800.1
CDS-3UTR GCA 90 bp TCCATTAGAGCTTTTGGCCCAAAGTGCCTATTTTTCTGTGAGATTTGGTCTCCTTCTCCTGTGGGGATTTaGCCATTGATGTTAAGAGTT +
Preference number: 4 (lower is better)
Translates to: SIRAFGPKCLFFCEIWSPSPVGI*PLMLRV
Trigger: AACTCTTAACATCAATGGGCAAATCCCCACAGGAGA...AGGAGACCAAATCTCACAGAAAAATAGGCACTTTGGGCCAAAAGCTCTAATGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR GCA 90 bp AGAAGTCAACATGCAAACAGAGGACACATACTTGTCACAAGTGAACTTGAGGTCTCTCCTGTGGGGATTTaGCCATTGATGTTAAGAGTT +
Preference number: 4 (lower is better)
Translates to: RSQHANRGHILVTSELEVSPVGI*PLMLRV
Trigger: AACTCTTAACATCAATGGGCAAATCCCCACAGGAGA...GACCTCAAGTTCACTTGTGACAAGTATGTGTCCTCTGTTTGCATGTTGACTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR GCA 90 bp GAAGTCAACATGCAAACAGAGGACACATACTTGTCACAAGTGAACTTGAGGTCATCTCCTGTGGGGATTTaGCCATTGATGTTAAGAGTT +
Preference number: 4 (lower is better)
Translates to: EVNMQTEDTYLSQVNLRSSPVGI*PLMLRV
Trigger: AACTCTTAACATCAATGGGCAAATCCCCACAGGAGA...TGACCTCAAGTTCACTTGTGACAAGTATGTGTCCTCTGTTTGCATGTTGACTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR GCA 90 bp AGTTCTCAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTCCTATAATTGCATCTCCTGTGGGGATTTaGCCATTGATGTTAAGAGTT +
Preference number: 4 (lower is better)
Translates to: SSQRLIIYWWLQIAPIIASPVGI*PLMLRV
Trigger: AACTCTTAACATCAATGGGCAAATCCCCACAGGAGA...TGCAATTATAGGAGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTGAGAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648181.1
ENST00000648891.1
CDS-3UTR GCA 90 bp AATCTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTTTGAGTTGTGGTGGTaGTGCTTGGGGTCTCAGATG +
Preference number: 4 (lower is better)
Translates to: NLESLKSDYGRLASLSFCFELWW*CLGSQM
Trigger: CATCTGAGACCCCAAGCAGCACCACCACAACTCAAA...GCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp GGATCAATGAGATCTAGAAGAATCTCTTGGTATAAACTCCCAATAGAAACTGAATGGGTGCTGCTCCTTTaGCTCCTTGATGGCTTGTAC +
Preference number: 4 (lower is better)
Translates to: GSMRSRRISWYKLPIETEWVLLL*LLDGLY
Trigger: GTACAAGCCATCAAGGAGGCAAAGGAGCAGCACCCA...TTCAGTTTCTATTGGGAGTTTATACCAAGAGATTCTTCTAGATCTCATTGATCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp GGATCAATGAGATCTAGAAGAATCTCTTGGTATAAACTCCCAATAGAAACTGAAGACATGTCTGGGTGCTaGTCCTTTGCCTCCTTGATG +
Preference number: 4 (lower is better)
Translates to: GSMRSRRISWYKLPIETEDMSGC*SFASLM
Trigger: CATCAAGGAGGCAAAGGAGCAGCACCCAGACATGTC...TTCAGTTTCTATTGGGAGTTTATACCAAGAGATTCTTCTAGATCTCATTGATCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp AATCTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCAACCCCAAGAACTGTTaGCAGAGATGGAGGAAAGGG +
Preference number: 4 (lower is better)
Translates to: NLESLKSDYGRLASLSFCNPKNC*QRWRKG
Trigger: CCCTTTCCTCCATCTCTGGCAACAGTTCTTGGGGTT...GCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR GCA 90 bp GGGCTCTTTCCCTCCCTCCTGTTGTTCATGTCTCACATGGGTACCAAAAGAAAAAGCAGACTTGATTATTaGCTGTGTAGTCTAAAGATT +
Preference number: 4 (lower is better)
Translates to: GLFPSLLLFMSHMGTKRKSRLDY*LCSLKI
Trigger: AATCTTTAGACTACACAGGCAATAATCAAGTCTGCT...TTTTCTTTTGGTACCCATGTGAGACATGAACAACAGGAGGGAGGGAAAGAGCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR GCA 90 bp TCTATACACCAGGCAGGAAAAAGTTGTCTGTCCCTGTACAGCTCAGAAATACTCATTTCTTCATTTTCTTaGTGGGGCAAGGCTCTTTCA +
Preference number: 4 (lower is better)
Translates to: SIHQAGKSCLSLYSSEILISSFS*WGKALS
Trigger: TGAAAGAGCCTTGCCCCAGCAAGAAAATGAAGAAAT...GAGTATTTCTGAGCTGTACAGGGACAGACAACTTTTTCCTGCCTGGTGTATAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR GCA 90 bp AGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAGAAGTTCAATGGATTTCTTCATTTTCTTaGTGGGGCAAGGCTCTTTCA +
Preference number: 4 (lower is better)
Translates to: RGHHTAITQLKPRTEVQWISSFS*WGKALS
Trigger: TGAAAGAGCCTTGCCCCAGCAAGAAAATGAAGAAAT...CCATTGAACTTCTGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR GCA 90 bp GGCAGGAAAAAGTTGTCTGTCCCTGTACAGCTCAGAAATACTCATAAAAAGGCCCACTGGCTTTCCCCTTaGTATGTTATTTATTCTTCC +
Preference number: 4 (lower is better)
Translates to: GRKKLSVPVQLRNTHKKAHWLSP*YVIYSS
Trigger: GGAAGAATAAATAACATAGCAAGGGGAAAGCCAGTG...GGCCTTTTTATGAGTATTTCTGAGCTGTACAGGGACAGACAACTTTTTCCTGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR GCA 90 bp CAGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAGAAGTTCAATGCACTGGCTTTCCCCTTaGTATGTTATTTATTCTTCC +
Preference number: 4 (lower is better)
Translates to: QRASYSNNTVEAKDRSSMHWLSP*YVIYSS
Trigger: GGAAGAATAAATAACATAGCAAGGGGAAAGCCAGTG...CATTGAACTTCTGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR GCA 90 bp CAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAATACATGTAACACAATAGGGTaGTCAATAGATACCTTTTTG +
Preference number: 4 (lower is better)
Translates to: QKSWLWAVHCYSFVPHNTCNTIG*SIDTFL
Trigger: CAAAAAGGTATCTATTGAGCACCCTATTGTGTTACA...TGTATTGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR CCA 90 bp AGCTGCAGAGACAGTTCTCAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTTCTCTTCATCAAGACTaGTTCCAAATTCTATCTCTT +
Preference number: 4 (lower is better)
Translates to: SCRDSSQRLIIYWWLQIASLHQD*FQILSL
Trigger: AAGAGATAGAATTTGGAACCAGTCTTGATGAAGAGA...AGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTGAGAACTGTCTCTGCAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648181.1
ENST00000648891.1
CDS-3UTR CCA 90 bp TCCATTAGAGCTTTTGGCCCAAAGTGCCTATTTTTCTGTGAGATTTGGTCTCCTATGAAGATCCAAAGATaGGTCTGTTTTGAGTTCCGG +
Preference number: 4 (lower is better)
Translates to: SIRAFGPKCLFFCEIWSPMKIQR*VCFEFR
Trigger: CCGGAACTCAAAACAGACCCATCTTTGGATCTTCAT...AGGAGACCAAATCTCACAGAAAAATAGGCACTTTGGGCCAAAAGCTCTAATGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp TTAAACTTCAATGCAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTATGAAGATCCAAAGATaGGTCTGTTTTGAGTTCCGG +
Preference number: 4 (lower is better)
Translates to: LNFNAEKLALGSPLLLLCMKIQR*VCFEFR
Trigger: CCGGAACTCAAAACAGACCCATCTTTGGATCTTCAT...ACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTGCATTGAAGTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CCA 90 bp GAAGTCAACATGCAAACAGAGGACACATACTTGTCACAAGTGAACTTGAGGTCAATGAAGATCCAAAGATaGGTCTGTTTTGAGTTCCGG +
Preference number: 4 (lower is better)
Translates to: EVNMQTEDTYLSQVNLRSMKIQR*VCFEFR
Trigger: CCGGAACTCAAAACAGACCCATCTTTGGATCTTCAT...TGACCTCAAGTTCACTTGTGACAAGTATGTGTCCTCTGTTTGCATGTTGACTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CCA 90 bp CAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAATACACTTTTACTTCTATTTTaGAGCACTCTTCAAGTCCTT +
Preference number: 4 (lower is better)
Translates to: QKSWLWAVHCYSFVPHNTLLLLF*STLQVL
Trigger: AAGGACTTGAAGAGTGCTCCAAAATAGAAGTAAAAG...TGTATTGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CCA 90 bp AAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAATACATACTTTGCGTTATCCCAAATaGCTAGACCAAAATAGTCTT +
Preference number: 4 (lower is better)
Translates to: KAGFGQSIATPLYPTIHTLRYPK*LDQNSL
Trigger: AAGACTATTTTGGTCTAGCCATTTGGGATAACGCAA...AGTATGTATTGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CCA 90 bp TCTATACACCAGGCAGGAAAAAGTTGTCTGTCCCTGTACAGCTCAGAAATACTCCCAGTTCAGACTGGATaGTGTAAGAACCTAATAATG +
Preference number: 4 (lower is better)
Translates to: SIHQAGKSCLSLYSSEILPVQTG*CKNLIM
Trigger: CATTATTAGGTTCTTACACCATCCAGTCTGAACTGG...GAGTATTTCTGAGCTGTACAGGGACAGACAACTTTTTCCTGCCTGGTGTATAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CCA 90 bp TTCCCTCCATTTTCACAATTGGTCATGTGGACAAAGTACTCACTCCTTCTCCTGCCAGTTCAGACTGGATaGTGTAAGAACCTAATAATG +
Preference number: 4 (lower is better)
Translates to: FPPFSQLVMWTKYSLLLLPVQTG*CKNLIM
Trigger: CATTATTAGGTTCTTACACCATCCAGTCTGAACTGG...CAGGAGAAGGAGTGAGTACTTTGTCCACATGACCAATTGTGAAAATGGAGGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642643.1
ENST00000648891.1
CDS-3UTR CCA 90 bp AAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAATACATACTCACTGTATCGAAATTTaGATCCTAGCGCAAGAAATT +
Preference number: 4 (lower is better)
Translates to: KAGFGQSIATPLYPTIHTHCIEI*ILAQEI
Trigger: AATTTCTTGCGCTAGGATCCAAATTTCGATACAGTG...AGTATGTATTGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CCA 90 bp CAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTCCTATAATTGCACTGGGTCACTGTATCGAAATTTaGATCCTAGCGCAAGAAATT +
Preference number: 4 (lower is better)
Translates to: QRLIIYWWLQIAPIIALGHCIEI*ILAQEI
Trigger: AATTTCTTGCGCTAGGATCCAAATTTCGATACAGTG...ACCCAGTGCAATTATAGGAGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648181.1
ENST00000648891.1
CDS-3UTR CCA 90 bp GCCACATTCCTTGTCATTTGGGATGAAAGAAAGGCCCAGGATCAGACAGAAGTACACTGTATCGAAATTTaGATCCTAGCGCAAGAAATT +
Preference number: 4 (lower is better)
Translates to: ATFLVIWDERKAQDQTEVHCIEI*ILAQEI
Trigger: AATTTCTTGCGCTAGGATCCAAATTTCGATACAGTG...TACTTCTGTCTGATCCTGGGCCTTTCTTTCATCCCAAATGACAAGGAATGTGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp AATCTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCCTCAGCTTGCTCAGGTaGCTCGTCTTCCTTTTTCAC +
Preference number: 4 (lower is better)
Translates to: NLESLKSDYGRLASLSFCLSLLR*LVFLFH
Trigger: GTGAAAAAGGAAGACGAGCCACCTGAGCAAGCTGAG...GCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp AATTGTCCAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCGGTCACCATTTGAGGTaGGTACTGTCACCTCGATGT +
Preference number: 4 (lower is better)
Translates to: NCPIEKFLFPLQFLYSAIGHHLR*VLSPRC
Trigger: ACATCGAGGTGACAGTACCCACCTCAAATGGTGACC...GATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTGGACAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644470.1
ENST00000644600.1
ENST00000646800.1
CDS-3UTR CCA 90 bp ATTACTTTGGTGCTGCCAATCACTAATTGGGCAATGCCAATAATGAAGCATTCTGCAAGCTTCTGTGTTTaGTCACCATTTGAGGTGGGT +
Preference number: 4 (lower is better)
Translates to: ITLVLPITNWAMPIMKHSASFCV*SPFEVG
Trigger: ACCCACCTCAAATGGTGACCAAACACAGAAGCTTGC...AGAATGCTTCATTATTGGCATTGCCCAATTAGTGATTGGCAGCACCAAAGTAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644600.1
ENST00000646800.1
CDS-3UTR CCA 90 bp GGACACATACTTGTCACAAGTGAACTTGAGGTCACAAAGCCATTGATTAAAAACGCAAGCTTCTGTGTTTaGTCACCATTTGAGGTGGGT +
Preference number: 4 (lower is better)
Translates to: GHILVTSELEVTKPLIKNASFCV*SPFEVG
Trigger: ACCCACCTCAAATGGTGACCAAACACAGAAGCTTGC...GTTTTTAATCAATGGCTTTGTGACCTCAAGTTCACTTGTGACAAGTATGTGTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644600.1
ENST00000644780.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CCA 90 bp CAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAGTCGCAAGCTTCTGTGTTTaGTCACCATTTGAGGTGGGT +
Preference number: 4 (lower is better)
Translates to: QLRSFYSPCNFCTLLSIVASFCV*SPFEVG
Trigger: ACCCACCTCAAATGGTGACCAAACACAGAAGCTTGC...GACTATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644470.1
ENST00000644600.1
ENST00000646800.1
CDS-3UTR CCA 90 bp GAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGTTTACTAGGCCGTGGTTCTaGTACAGACTCCATGAAGTT +
Preference number: 4 (lower is better)
Translates to: ESLKSDYGRLASLSFCWFTRPWF*YRLHEV
Trigger: AACTTCATGGAGTCTGTACCAGAACCACGGCCTAGT...AAACCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
CDS-3UTR CCA 90 bp CAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAGTCACTAGGCCGTGGTTCTaGTACAGACTCCATGAAGTT +
Preference number: 4 (lower is better)
Translates to: QLRSFYSPCNFCTLLSIVTRPWF*YRLHEV
Trigger: AACTTCATGGAGTCTGTACCAGAACCACGGCCTAGT...GACTATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644470.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR CCA 90 bp AATTGTCCAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCCATTCACTAGGCCGTaGTTCTGGTACAGACTCCAT +
Preference number: 4 (lower is better)
Translates to: NCPIEKFLFPLQFLYSAIPFTRP*FWYRLH
Trigger: ATGGAGTCTGTACCAGAACCACGGCCTAGTGAATGG...GATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTGGACAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644470.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR CCA 90 bp ATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAGTCAACCATTCACTAGGCCGTaGTTCTGGTACAGACTCCAT +
Preference number: 4 (lower is better)
Translates to: IEKFLFPLQFLYSAIHSQPFTRP*FWYRLH
Trigger: ATGGAGTCTGTACCAGAACCACGGCCTAGTGAATGG...TTGACTATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644470.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR CCA 90 bp CTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGGGAAGGGTGAGTGAGTaGATAAGCGTTTATCCCATT +
Preference number: 4 (lower is better)
Translates to: LESLKSDYGRLASLSFCWGRVSE*ISVYPI
Trigger: AATGGGATAAACGCTTATCCACTCACTCACCCTTCC...CCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
CDS-3UTR CCA 90 bp CTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGAGGGACGTCTTTGGTTaGGATTTCACTTTTCACAGC +
Preference number: 4 (lower is better)
Translates to: LESLKSDYGRLASLSFCWRDVFG*DFTFHS
Trigger: GCTGTGAAAAGTGAAATCCCAACCAAAGACGTCCCT...CCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp AATCTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGTCAGCAAGACTCCTaGGTCCAAGTCTCCACTGTT +
Preference number: 4 (lower is better)
Translates to: NLESLKSDYGRLASLSFCCQQDS*VQVSTV
Trigger: AACAGTGGAGACTTGGACCCAGGAGTCTTGCTGACA...GCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp AATCTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGTGGTGGTGCTGCTTaGGGTCTCAGATGTGATAGT +
Preference number: 4 (lower is better)
Translates to: NLESLKSDYGRLASLSFCCGGAA*GLRCDS
Trigger: ACTATCACATCTGAGACCCCAAGCAGCACCACCACA...GCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp GGATCAATGAGATCTAGAAGAATCTCTTGGTATAAACTCCCAATAGAAACTGAAGGAGAAGGGCAGAGTTaGGGTAGGTTAGTTCCTGAG +
Preference number: 4 (lower is better)
Translates to: GSMRSRRISWYKLPIETEGEGQS*GRLVPE
Trigger: CTCAGGAACTAACCTACCCCAACTCTGCCCTTCTCC...TTCAGTTTCTATTGGGAGTTTATACCAAGAGATTCTTCTAGATCTCATTGATCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp GGATCAATGAGATCTAGAAGAATCTCTTGGTATAAACTCCCAATAGAAACTGAACTGGTTTCTCTTGGATaGGAGAAGGGCAGAGTTGGG +
Preference number: 4 (lower is better)
Translates to: GSMRSRRISWYKLPIETELVSLG*EKGRVG
Trigger: CCCAACTCTGCCCTTCTCCCATCCAAGAGAAACCAG...TTCAGTTTCTATTGGGAGTTTATACCAAGAGATTCTTCTAGATCTCATTGATCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp AATCTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCGAAGTCCCACTAAGCTaGCTTTGGCTTCCAACACAG +
Preference number: 4 (lower is better)
Translates to: NLESLKSDYGRLASLSFCEVPLS*LWLPTQ
Trigger: CTGTGTTGGAAGCCAAAGCCAGCTTAGTGGGACTTC...GCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp GGATCAATGAGATCTAGAAGAATCTCTTGGTATAAACTCCCAATAGAAACTGAATTTGGTCTCCTGAGATaGGAGCTAGGGGGAGCACTT +
Preference number: 4 (lower is better)
Translates to: GSMRSRRISWYKLPIETEFGLLR*ELGGAL
Trigger: AAGTGCTCCCCCTAGCTCCCATCTCAGGAGACCAAA...TTCAGTTTCTATTGGGAGTTTATACCAAGAGATTCTTCTAGATCTCATTGATCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp CTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGAGGCCAATGTGTTTGTaGGAAGCAGTTGGAAGGTTA +
Preference number: 4 (lower is better)
Translates to: LESLKSDYGRLASLSFCWRPMCL*EAVGRL
Trigger: TAACCTTCCAACTGCTTCCCACAAACACATTGGCCT...CCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp GAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGTTTACAAAACTCAGGCAGTaGAGACTTTGGACGGTGTTG +
Preference number: 4 (lower is better)
Translates to: ESLKSDYGRLASLSFCWFTKLRQ*RLWTVL
Trigger: CAACACCGTCCAAAGTCTCCACTGCCTGAGTTTTGT...AAACCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp GGATCAATGAGATCTAGAAGAATCTCTTGGTATAAACTCCCAATAGAAACTGAAAAAGGGGAAGAGGCCTaGAAGGACACCCATCTTGCT +
Preference number: 4 (lower is better)
Translates to: GSMRSRRISWYKLPIETEKGEEA*KDTHLA
Trigger: AGCAAGATGGGTGTCCTTCCAGGCCTCTTCCCCTTT...TTCAGTTTCTATTGGGAGTTTATACCAAGAGATTCTTCTAGATCTCATTGATCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR CCA 90 bp TCAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTCCTATAATTGCACTGGGCTCCATTTTCACAATTaGTCATGTGGACAAAGTACT +
Preference number: 4 (lower is better)
Translates to: SEANHLLVAPNSSYNCTGLHFHN*SCGQST
Trigger: AGTACTTTGTCCACATGACCAATTGTGAAAATGGAG...CCCAGTGCAATTATAGGAGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648181.1
ENST00000648891.1
CDS-3UTR CCA 90 bp GGATCAATGAGATCTAGAAGAATCTCTTGGTATAAACTCCCAATAGAAACTGAATCTTCCATGCTTCTGTaGGCTCTGGCTCAGCTTGCT +
Preference number: 4 (lower is better)
Translates to: GSMRSRRISWYKLPIETESSMLL*ALAQLA
Trigger: AGCAAGCTGAGCCAGAGCCCACAGAAGCATGGAAGA...TTCAGTTTCTATTGGGAGTTTATACCAAGAGATTCTTCTAGATCTCATTGATCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373800.7
CDS-3UTR CCA 90 bp TTAAACTTCAATGCAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTTCTTCATTTTCTTGCTaGGGCAAGGCTCTTTCAGTA +
Preference number: 4 (lower is better)
Translates to: LNFNAEKLALGSPLLLLCSSFSC*GKALSV
Trigger: TACTGAAAGAGCCTTGCCCCAGCAAGAAAATGAAGA...ACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTGCATTGAAGTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CCA 90 bp AAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAATACATACTAGGAATACGAGGAGATaGAAAAGTACTAAAGTAGAG +
Preference number: 4 (lower is better)
Translates to: KAGFGQSIATPLYPTIHTRNTRR*KSTKVE
Trigger: CTCTACTTTAGTACTTTTCCATCTCCTCGTATTCCT...AGTATGTATTGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CCA 90 bp AATTGTCCAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCAGAAAAGCTGGCTTTaGGCAGTCCATTGCTACTCC +
Preference number: 4 (lower is better)
Translates to: NCPIEKFLFPLQFLYSAIQKSWL*AVHCYS
Trigger: GGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTG...GATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTGGACAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR CCA 90 bp AGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAGTCAAGACATCAATGCAGAAAAGCTaGCTTTGGGCAGTCCATTGC +
Preference number: 4 (lower is better)
Translates to: RSFYSPCNFCTLLSIVKTSMQKS*LWAVHC
Trigger: GCAATGGACTGCCCAAAGCCAGCTTTTCTGCATTGA...TGTCTTGACTATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR CCA 90 bp TTCAACACAAGTACACGAACAAACAGGTCTGAAGTATATCAGGAAAACAAAGTAGTAGCTAGGGGACTCTaGCCCACCAACCTTTCTTTC +
Preference number: 4 (lower is better)
Translates to: FNTSTRTNRSEVYQENKVVARGL*PTNLSF
Trigger: GAAAGAAAGGTTGGTGGGCCAGAGTCCCCTAGCTAC...TACTTTGTTTTCCTGATATACTTCAGACCTGTTTGTTCGTGTACTTGTGTTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000643173.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
CDS-3UTR CCA 90 bp ACTATCAAGATCAGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAAGTTCAAGGAATCACTaGCTTTCCCCTTGCTATGTT +
Preference number: 4 (lower is better)
Translates to: TIKIRGHHTAITQLKPRTSSRNH*LSPCYV
Trigger: AACATAGCAAGGGGAAAGCCAGTGATTCCTTGAACT...TGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCTGATCTTGATAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR CCA 90 bp CAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAATACAGATGTGCAAAGGATTTaGAAGTATCTTTTAGACACT +
Preference number: 4 (lower is better)
Translates to: QKSWLWAVHCYSFVPHNTDVQRI*KYLLDT
Trigger: AGTGTCTAAAAGATACTTCCAAATCCTTTGCACATC...TGTATTGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR CCA 90 bp CACTGTATCGAAATTTGGATCCTAGCGCAAGAAATTTGCTTTTGGGAATGGTGTAGGCTAATCATCTACTaGTGGCTCCAAATAGCTCCT +
Preference number: 4 (lower is better)
Translates to: HCIEIWILAQEICFWEWCRLIIY*WLQIAP
Trigger: AGGAGCTATTTGGAGCCACCAGTAGATGATTAGCCT...ACACCATTCCCAAAAGCAAATTTCTTGCGCTAGGATCCAAATTTCGATACAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642643.1
ENST00000648891.1
CDS-3UTR CCA 90 bp TTGGATCCTAGCGCAAGAAATTTGCTTTTGGGAATGGTGTCTGTAGATGTCAATAGGCTAATCATCTACTaGTGGCTCCAAATAGCTCCT +
Preference number: 4 (lower is better)
Translates to: LDPSARNLLLGMVSVDVNRLIIY*WLQIAP
Trigger: AGGAGCTATTTGGAGCCACCAGTAGATGATTAGCCT...ATTGACATCTACAGACACCATTCCCAAAAGCAAATTTCTTGCGCTAGGATCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642643.1
ENST00000648891.1
CDS-3UTR CCA 90 bp AGCTGCAGAGACAGTTCTCAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTACCTCTACTGGCTTATaGTCAGTTTATAAACATACA +
Preference number: 4 (lower is better)
Translates to: SCRDSSQRLIIYWWLQIATSTGL*SVYKHT
Trigger: TGTATGTTTATAAACTGACCATAAGCCAGTAGAGGT...AGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTGAGAACTGTCTCTGCAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648181.1
ENST00000648891.1
3UTR CAA 72 bp GGCTTGGCCATTCTCCTCTTAATCATTCTTACCCTATaGATAGAAGAAATGGCCTCTCCTTTGACTCTCAAT +
Preference number: 4 (lower is better)
Translates to: GLAILLLIILTL*IEEMASPLTLN
Trigger: ATTGAGAGTCAAAGGAGAGGCCATTTCTTCTATCAATAGGGTAAGAATGATTAAGAGGAGAATGGCCAAGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636666.1
ENST00000644342.1
ENST00000646800.1
CDS-3UTR TCA 90 bp GAGACATTAACCAAATCATCCATATTGGTACATTCAAGTGCCATAAAAAGCAAGCTTCTGTTGGTGCTGTaGATTTTCGGCCTCAGTCAC +
Preference number: 4 (lower is better)
Translates to: ETLTKSSILVHSSAIKSKLLLVL*IFGLSH
Trigger: GTGACTGAGGCCGAAAATTCACAGCACCAACAGAAG...CTTGCTTTTTATGGCACTTGAATGTACCAATATGGATGATTTGGTTAATGTCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp TTCAACACAAGTACACGAACAAACAGGTCTGAAGTATATCAGGAAAACAAAGTACTTCTGTTGGTGCTGTaGATTTTCGGCCTCAGTCAC +
Preference number: 4 (lower is better)
Translates to: FNTSTRTNRSEVYQENKVLLLVL*IFGLSH
Trigger: GTGACTGAGGCCGAAAATTCACAGCACCAACAGAAG...TACTTTGTTTTCCTGATATACTTCAGACCTGTTTGTTCGTGTACTTGTGTTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp GGATCAATGAGATCTAGAAGAATCTCTTGGTATAAACTCCCAATAGAAACTGAAAGGTTCTTGTTGGCCTaGGTTTATGGCTTCCTCACC +
Preference number: 4 (lower is better)
Translates to: GSMRSRRISWYKLPIETERFLLA*VYGFLT
Trigger: GGTGAGGAAGCCATAAACTCAGGCCAACAAGAACCT...TTCAGTTTCTATTGGGAGTTTATACCAAGAGATTCTTCTAGATCTCATTGATCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp ATCTTAATTCAGAGAAGGGTTTATGTACAGATCTTGAGTAAATCTGTGTTCCAGAGGTTCTTGTTGGCCTaGGTTTATGGCTTCCTCACC +
Preference number: 4 (lower is better)
Translates to: ILIQRRVYVQILSKSVFQRFLLA*VYGFLT
Trigger: GGTGAGGAAGCCATAAACTCAGGCCAACAAGAACCT...CTGGAACACAGATTTACTCAAGATCTGTACATAAACCCTTCTCTGAATTAAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp AATCTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCAAGTCCTCTGCTTTCTaGTGTCCGCTCCTTGTTCTT +
Preference number: 4 (lower is better)
Translates to: NLESLKSDYGRLASLSFCKSSAF*CPLLVL
Trigger: AAGAACAAGGAGCGGACATCAGAAAGCAGAGGACTT...GCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp CAGATATCTGAAGCAACTTCCATGTCTTTGACCCAAAGAAGCTCCAAAAAGAAAGAGATTTGGGCCTTTTaGGAAACGAGGAGAATAGTC +
Preference number: 4 (lower is better)
Translates to: QISEATSMSLTQRSSKKKEIWAF*ETRRIV
Trigger: GACTATTCTCCTCGTTTCTCAAAAGGCCCAAATCTC...TTTCTTTTTGGAGCTTCTTTGGGTCAAAGACATGGAAGTTGCTTCAGATATCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp ATTGTCCAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCGAGATTTGGGCCTTTTaGGAAACGAGGAGAATAGTC +
Preference number: 4 (lower is better)
Translates to: IVQLRSFYSPCNFCTLLSEIWAF*ETRRIV
Trigger: GACTATTCTCCTCGTTTCTCAAAAGGCCCAAATCTC...GGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTGGACAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000646800.1
CDS-3UTR TCA 90 bp GGACACATACTTGTCACAAGTGAACTTGAGGTCACAAAGCCATTGATTAAAAACGAGATTTGGGCCTTTTaGGAAACGAGGAGAATAGTC +
Preference number: 4 (lower is better)
Translates to: GHILVTSELEVTKPLIKNEIWAF*ETRRIV
Trigger: GACTATTCTCCTCGTTTCTCAAAAGGCCCAAATCTC...GTTTTTAATCAATGGCTTTGTGACCTCAAGTTCACTTGTGACAAGTATGTGTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp TTGGCAGTGTTACCTTTAGGTAATACAAAGCTGGAATGCCCAATATTTTTCCTCGAGATTTGGGCCTTTTaGGAAACGAGGAGAATAGTC +
Preference number: 4 (lower is better)
Translates to: LAVLPLGNTKLECPIFFLEIWAF*ETRRIV
Trigger: GACTATTCTCCTCGTTTCTCAAAAGGCCCAAATCTC...GAGGAAAAATATTGGGCATTCCAGCTTTGTATTACCTAAAGGTAACACTGCCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644342.1
ENST00000646800.1
CDS-3UTR TCA 90 bp GGATCAATGAGATCTAGAAGAATCTCTTGGTATAAACTCCCAATAGAAACTGAATCTTCCTCGGACACCTaGGATTTGGGCCTTTTGAGA +
Preference number: 4 (lower is better)
Translates to: GSMRSRRISWYKLPIETESSSDT*DLGLLR
Trigger: TCTCAAAAGGCCCAAATCTCAGGTGTCCGAGGAAGA...TTCAGTTTCTATTGGGAGTTTATACCAAGAGATTCTTCTAGATCTCATTGATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp GGATCAATGAGATCTAGAAGAATCTCTTGGTATAAACTCCCAATAGAAACTGAAAAGATGGGTCTGTTTTaGGTTCCGGTTCAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: GSMRSRRISWYKLPIETEKMGLF*VPVQEL
Trigger: CAGCTCCTGAACCGGAACTCAAAACAGACCCATCTT...TTCAGTTTCTATTGGGAGTTTATACCAAGAGATTCTTCTAGATCTCATTGATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp ATCTTAATTCAGAGAAGGGTTTATGTACAGATCTTGAGTAAATCTGTGTTCCAGAAGATGGGTCTGTTTTaGGTTCCGGTTCAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: ILIQRRVYVQILSKSVFQKMGLF*VPVQEL
Trigger: CAGCTCCTGAACCGGAACTCAAAACAGACCCATCTT...CTGGAACACAGATTTACTCAAGATCTGTACATAAACCCTTCTCTGAATTAAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp AATTGTCCAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCAATCTGGATCTTCTCTaGGTTCTTCCTGAGCAGGCT +
Preference number: 4 (lower is better)
Translates to: NCPIEKFLFPLQFLYSAINLDLL*VLPEQA
Trigger: AGCCTGCTCAGGAAGAACTCAGAGAAGATCCAGATT...GATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTGGACAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000646800.1
CDS-3UTR TCA 90 bp GAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGTTTTCAAGTTCCTTGGTCTaGTTCGGGGCCAGTTTAAAA +
Preference number: 4 (lower is better)
Translates to: ESLKSDYGRLASLSFCWFSSSLV*FGASLK
Trigger: TTTTAAACTGGCCCCGAATCAGACCAAGGAACTTGA...AAACCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp ATTGTCCAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCTCAAGTTCCTTGGTCTaGTTCGGGGCCAGTTTAAAA +
Preference number: 4 (lower is better)
Translates to: IVQLRSFYSPCNFCTLLSSSSLV*FGASLK
Trigger: TTTTAAACTGGCCCCGAATCAGACCAAGGAACTTGA...GGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTGGACAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR TCA 90 bp CTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGACTTATGCAGTTCCATaGCCTTCTCTTCAAGTTCCT +
Preference number: 4 (lower is better)
Translates to: LESLKSDYGRLASLSFCWTYAVP*PSLQVP
Trigger: AGGAACTTGAAGAGAAGGTCATGGAACTGCATAAGT...CCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp CTTCATCCAATACAAGGGCTTGGCCATTCTCCTCTTAATCATTCTTACCCTATTACTTATGCAGTTCCATaGCCTTCTCTTCAAGTTCCT +
Preference number: 4 (lower is better)
Translates to: LHPIQGLGHSPLNHSYPITYAVP*PSLQVP
Trigger: AGGAACTTGAAGAGAAGGTCATGGAACTGCATAAGT...AATAGGGTAAGAATGATTAAGAGGAGAATGGCCAAGCCCTTGTATTGGATGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636666.1
ENST00000644342.1
ENST00000646800.1
CDS-3UTR TCA 90 bp GAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGTTTAGTCATGGACCTGTATaGCTTATGCAGTTCCATGAC +
Preference number: 4 (lower is better)
Translates to: ESLKSDYGRLASLSFCWFSHGPV*LMQFHD
Trigger: GTCATGGAACTGCATAAGTCATACAGGTCCATGACT...AAACCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp GGACACATACTTGTCACAAGTGAACTTGAGGTCACAAAGCCATTGATTAAAAACAGTCATGGACCTGTATaGCTTATGCAGTTCCATGAC +
Preference number: 4 (lower is better)
Translates to: GHILVTSELEVTKPLIKNSHGPV*LMQFHD
Trigger: GTCATGGAACTGCATAAGTCATACAGGTCCATGACT...GTTTTTAATCAATGGCTTTGTGACCTCAAGTTCACTTGTGACAAGTATGTGTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp TTGGCAGTGTTACCTTTAGGTAATACAAAGCTGGAATGCCCAATATTTTTCCTCAGTCATGGACCTGTATaGCTTATGCAGTTCCATGAC +
Preference number: 4 (lower is better)
Translates to: LAVLPLGNTKLECPIFFLSHGPV*LMQFHD
Trigger: GTCATGGAACTGCATAAGTCATACAGGTCCATGACT...GAGGAAAAATATTGGGCATTCCAGCTTTGTATTACCTAAAGGTAACACTGCCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000636666.1
ENST00000644342.1
ENST00000646800.1
CDS-3UTR TCA 90 bp CAGATATCTGAAGCAACTTCCATGTCTTTGACCCAAAGAAGCTCCAAAAAGAAAAGTCATGGACCTGTATaGCTTATGCAGTTCCATGAC +
Preference number: 4 (lower is better)
Translates to: QISEATSMSLTQRSSKKKSHGPV*LMQFHD
Trigger: GTCATGGAACTGCATAAGTCATACAGGTCCATGACT...TTTCTTTTTGGAGCTTCTTTGGGTCAAAGACATGGAAGTTGCTTCAGATATCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp GAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGTTTAGCAGACACCTAGGATaGTATCTACTCCTTCCAAGT +
Preference number: 4 (lower is better)
Translates to: ESLKSDYGRLASLSFCWFSRHLG*YLLLPS
Trigger: ACTTGGAAGGAGTAGATATCATCCTAGGTGTCTGCT...AAACCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp AGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAGTCAAGACAAGCAGACACCTAGGATaGTATCTACTCCTTCCAAGT +
Preference number: 4 (lower is better)
Translates to: RSFYSPCNFCTLLSIVKTSRHLG*YLLLPS
Trigger: ACTTGGAAGGAGTAGATATCATCCTAGGTGTCTGCT...TGTCTTGACTATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR TCA 90 bp CTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGGGTAACTGGGAAGTTTaGATCCGATGGTACTTTCAT +
Preference number: 4 (lower is better)
Translates to: LESLKSDYGRLASLSFCWGNWEV*IRWYFH
Trigger: ATGAAAGTACCATCGGATTCAAACTTCCCAGTTACC...CCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp TCTATACACCAGGCAGGAAAAAGTTGTCTGTCCCTGTACAGCTCAGAAATACTCAATCTGAAAAACGTGTaGTGTTCTACACAGACTTTC +
Preference number: 4 (lower is better)
Translates to: SIHQAGKSCLSLYSSEILNLKNV*CSTQTF
Trigger: GAAAGTCTGTGTAGAACATCACACGTTTTTCAGATT...GAGTATTTCTGAGCTGTACAGGGACAGACAACTTTTTCCTGCCTGGTGTATAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp ACTATCAAGATCAGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACATCTTTTTCAGCTCACTaGTGCTGGCATGATGTTTTT +
Preference number: 4 (lower is better)
Translates to: TIKIRGHHTAITQLKPRTSFSAH*CWHDVF
Trigger: AAAAACATCATGCCAGCATCAGTGAGCTGAAAAAGA...TGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCTGATCTTGATAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp GAAGTCAACATGCAAACAGAGGACACATACTTGTCACAAGTGAACTTGAGGTCATCTTTTTCAGCTCACTaGTGCTGGCATGATGTTTTT +
Preference number: 4 (lower is better)
Translates to: EVNMQTEDTYLSQVNLRSSFSAH*CWHDVF
Trigger: AAAAACATCATGCCAGCATCAGTGAGCTGAAAAAGA...TGACCTCAAGTTCACTTGTGACAAGTATGTGTCCTCTGTTTGCATGTTGACTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp TTAGGGGCCTCCTTGGTTTACTATATAATTGTGGGGAACCAGTCCAGATATTTCTCTTTTTCAGCTCACTaGTGCTGGCATGATGTTTTT +
Preference number: 4 (lower is better)
Translates to: LGASLVYYIIVGNQSRYFSFSAH*CWHDVF
Trigger: AAAAACATCATGCCAGCATCAGTGAGCTGAAAAAGA...GAAATATCTGGACTGGTTCCCCACAATTATATAGTAAACCAAGGAGGCCCCTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000645184.1
ENST00000648181.1
CDS-3UTR TCA 90 bp GGATCAATGAGATCTAGAAGAATCTCTTGGTATAAACTCCCAATAGAAACTGAAGTTCGGAAGGGTGAGTaGGTGGATAAGCGTTTATCC +
Preference number: 4 (lower is better)
Translates to: GSMRSRRISWYKLPIETEVRKGE*VDKRLS
Trigger: GGATAAACGCTTATCCACTCACTCACCCTTCCGAAC...TTCAGTTTCTATTGGGAGTTTATACCAAGAGATTCTTCTAGATCTCATTGATCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
CDS-3UTR TCA 90 bp GAGACATTAACCAAATCATCCATATTGGTACATTCAAGTGCCATAAAAAGCAAGGTTCGGAAGGGTGAGTaGGTGGATAAGCGTTTATCC +
Preference number: 4 (lower is better)
Translates to: ETLTKSSILVHSSAIKSKVRKGE*VDKRLS
Trigger: GGATAAACGCTTATCCACTCACTCACCCTTCCGAAC...CTTGCTTTTTATGGCACTTGAATGTACCAATATGGATGATTTGGTTAATGTCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp TTGGATCCTAGCGCAAGAAATTTGCTTTTGGGAATGGTGTCTGTAGATGTCAATAGCATTGGCATTATCTaGGATGGTGACAGTTTGTGT +
Preference number: 4 (lower is better)
Translates to: LDPSARNLLLGMVSVDVNSIGII*DGDSLC
Trigger: ACACAAACTGTCACCATCTCAGATAATGCCAATGCT...ATTGACATCTACAGACACCATTCCCAAAAGCAAATTTCTTGCGCTAGGATCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643155.1
CDS-3UTR TCA 90 bp CAGATATCTGAAGCAACTTCCATGTCTTTGACCCAAAGAAGCTCCAAAAAGAAATCAGATGTGATAGTTTaGGCTGTCAGCAAGACTCCT +
Preference number: 4 (lower is better)
Translates to: QISEATSMSLTQRSSKKKSDVIV*AVSKTP
Trigger: AGGAGTCTTGCTGACAGCTCAAACTATCACATCTGA...TTTCTTTTTGGAGCTTCTTTGGGTCAAAGACATGGAAGTTGCTTCAGATATCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp AAAAATGCACACACCCGAAATGAGTTCAAACCAGCCGAAACAAAACTCAGGCAGTATCAGCATCTCCTGTaGTCACAATTCTCTTTTCAA +
Preference number: 4 (lower is better)
Translates to: KNAHTRNEFKPAETKLRQYQHLL*SQFSFQ
Trigger: TTGAAAAGAGAATTGTGATCACAGGAGATGCTGATA...CTGCCTGAGTTTTGTTTCGGCTGGTTTGAACTCATTTCGGGTGTGTGCATTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp GGATCAATGAGATCTAGAAGAATCTCTTGGTATAAACTCCCAATAGAAACTGAATGCACACACCCGAAATaGGTTCAAACCAGCCGAAAC +
Preference number: 4 (lower is better)
Translates to: GSMRSRRISWYKLPIETECTHPK*VQTSRN
Trigger: GTTTCGGCTGGTTTGAACTCATTTCGGGTGTGTGCA...TTCAGTTTCTATTGGGAGTTTATACCAAGAGATTCTTCTAGATCTCATTGATCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp GGCAGGAAAAAGTTGTCTGTCCCTGTACAGCTCAGAAATACTCATAAAAAGGCCTTTTTGATCTCCTCTTaGCTCTTGTCTAAATCCTTC +
Preference number: 4 (lower is better)
Translates to: GRKKLSVPVQLRNTHKKAFLISS*LLSKSF
Trigger: GAAGGATTTAGACAAGAGTCAAGAGGAGATCAAAAA...GGCCTTTTTATGAGTATTTCTGAGCTGTACAGGGACAGACAACTTTTTCCTGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000644848.1
ENST00000646189.1
ENST00000650265.1
CDS-3UTR TCA 90 bp TCTATACACCAGGCAGGAAAAAGTTGTCTGTCCCTGTACAGCTCAGAAATACTCTTTTTGATCTCCTCTTaGCTCTTGTCTAAATCCTTC +
Preference number: 4 (lower is better)
Translates to: SIHQAGKSCLSLYSSEILFLISS*LLSKSF
Trigger: GAAGGATTTAGACAAGAGTCAAGAGGAGATCAAAAA...GAGTATTTCTGAGCTGTACAGGGACAGACAACTTTTTCCTGCCTGGTGTATAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000644848.1
ENST00000646189.1
ENST00000650265.1
CDS-3UTR TCA 90 bp TTAAACTTCAATGCAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTTTTTTGAGAGACTTGTaGTCCTCAGGGATTGGAATA +
Preference number: 4 (lower is better)
Translates to: LNFNAEKLALGSPLLLLCFLRDL*SSGIGI
Trigger: TATTCCAATCCCTGAGGATCACAAGTCTCTCAAAAA...ACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTGCATTGAAGTTTAA
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp AGAAGTCAACATGCAAACAGAGGACACATACTTGTCACAAGTGAACTTGAGGTCTTTTTGAGAGACTTGTaGTCCTCAGGGATTGGAATA +
Preference number: 4 (lower is better)
Translates to: RSQHANRGHILVTSELEVFLRDL*SSGIGI
Trigger: TATTCCAATCCCTGAGGATCACAAGTCTCTCAAAAA...GACCTCAAGTTCACTTGTGACAAGTATGTGTCCTCTGTTTGCATGTTGACTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp ATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAGTCAAGAGCACCCTGTTTTCTaGTCACAGAAAGACCAACCA +
Preference number: 4 (lower is better)
Translates to: IEKFLFPLQFLYSAIHSQEHPVF*SQKDQP
Trigger: TGGTTGGTCTTTCTGTGATCAGAAAACAGGGTGCTC...TTGACTATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR TCA 90 bp GTCCAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAATAGGTAGAGTAGTCTaGGAATTTCAGTCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: VQLRSFYSPCNFCTLLSIIGRVV*EFQSWL
Trigger: CAGCCAGGACTGAAATTCTCAGACTACTCTACCTAT...TATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTGGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR TCA 90 bp ATTACTTTGGTGCTGCCAATCACTAATTGGGCAATGCCAATAATGAAGCATTCTATAGGTAGAGTAGTCTaGGAATTTCAGTCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: ITLVLPITNWAMPIMKHSIGRVV*EFQSWL
Trigger: CAGCCAGGACTGAAATTCTCAGACTACTCTACCTAT...AGAATGCTTCATTATTGGCATTGCCCAATTAGTGATTGGCAGCACCAAAGTAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR TCA 90 bp AGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAGAAGTTCAATGGACGAACAAACAGGTCTaGAGTATATCAGGAAAACAA +
Preference number: 4 (lower is better)
Translates to: RGHHTAITQLKPRTEVQWTNKQV*SISGKQ
Trigger: TTGTTTTCCTGATATACTTCAGACCTGTTTGTTCGT...CCATTGAACTTCTGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp GGACACATACTTGTCACAAGTGAACTTGAGGTCACAAAGCCATTGATTAAAAACTTGCACACCCCTAAGTaGTATGTATCAGGGAGAAAG +
Preference number: 4 (lower is better)
Translates to: GHILVTSELEVTKPLIKNLHTPK*YVSGRK
Trigger: CTTTCTCCCTGATACATATCACTTAGGGGTGTGCAA...GTTTTTAATCAATGGCTTTGTGACCTCAAGTTCACTTGTGACAAGTATGTGTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR TCA 90 bp ATTACTTTGGTGCTGCCAATCACTAATTGGGCAATGCCAATAATGAAGCATTCTTTGCACACCCCTAAGTaGTATGTATCAGGGAGAAAG +
Preference number: 4 (lower is better)
Translates to: ITLVLPITNWAMPIMKHSLHTPK*YVSGRK
Trigger: CTTTCTCCCTGATACATATCACTTAGGGGTGTGCAA...AGAATGCTTCATTATTGGCATTGCCCAATTAGTGATTGGCAGCACCAAAGTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR TCA 90 bp CAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAGTCTTGCACACCCCTAAGTaGTATGTATCAGGGAGAAAG +
Preference number: 4 (lower is better)
Translates to: QLRSFYSPCNFCTLLSIVLHTPK*YVSGRK
Trigger: CTTTCTCCCTGATACATATCACTTAGGGGTGTGCAA...GACTATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644470.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR TCA 90 bp CAGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAGAAGTTCAATGAGATACCTTTTTGAGTaGGTGAACATTAGAACGGAA +
Preference number: 4 (lower is better)
Translates to: QRASYSNNTVEAKDRSSMRYLFE*VNIRTE
Trigger: TTCCGTTCTAATGTTCACTCACTCAAAAAGGTATCT...CATTGAACTTCTGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR TCA 90 bp AGTTCTCAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTCCTATAATTGCACCTGAAGGCACAGTTTaGATACAAATAAACCTCTAC +
Preference number: 4 (lower is better)
Translates to: SSQRLIIYWWLQIAPIIAPEGTV*IQINLY
Trigger: GTAGAGGTTTATTTGTATTCAAACTGTGCCTTCAGG...TGCAATTATAGGAGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTGAGAACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648181.1
ENST00000648891.1
CDS-3UTR GCA 90 bp GAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGTTTTCTTCCTTCTGTTGGTaGTGTGAATTTTCGGCCTCA +
Preference number: 4 (lower is better)
Translates to: ESLKSDYGRLASLSFCWFSSFCW*CEFSAS
Trigger: TGAGGCCGAAAATTCACAGCACCAACAGAAGGAAGA...AAACCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp ATTACTTTGGTGCTGCCAATCACTAATTGGGCAATGCCAATAATGAAGCATTCTTCTTCCTTCTGTTGGTaGTGTGAATTTTCGGCCTCA +
Preference number: 4 (lower is better)
Translates to: ITLVLPITNWAMPIMKHSSSFCW*CEFSAS
Trigger: TGAGGCCGAAAATTCACAGCACCAACAGAAGGAAGA...AGAATGCTTCATTATTGGCATTGCCCAATTAGTGATTGGCAGCACCAAAGTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000646800.1
CDS-3UTR GCA 90 bp GTCCAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATATCTTCCTTCTGTTGGTaGTGTGAATTTTCGGCCTCA +
Preference number: 4 (lower is better)
Translates to: VQLRSFYSPCNFCTLLSISSFCW*CEFSAS
Trigger: TGAGGCCGAAAATTCACAGCACCAACAGAAGGAAGA...TATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTGGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000646800.1
CDS-3UTR GCA 90 bp ACATTTATTCCCTCCATTTTCACAATTGGTCATGTGGACAAAGTACTCACTCCTTCTTCCTTCTGTTGGTaGTGTGAATTTTCGGCCTCA +
Preference number: 4 (lower is better)
Translates to: TFIPSIFTIGHVDKVLTPSSFCW*CEFSAS
Trigger: TGAGGCCGAAAATTCACAGCACCAACAGAAGGAAGA...AGGAGTGAGTACTTTGTCCACATGACCAATTGTGAAAATGGAGGGAATAAATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648891.1
CDS-3UTR GCA 90 bp ACTATCAAGATCAGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAATTATCTCCTTCAGCTaGTGTTTGACAAGATTCCTC +
Preference number: 4 (lower is better)
Translates to: TIKIRGHHTAITQLKPRTIISFS*CLTRFL
Trigger: GAGGAATCTTGTCAAACAGCAGCTGAAGGAGATAAT...TGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCTGATCTTGATAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR GCA 90 bp AGAAGTCAACATGCAAACAGAGGACACATACTTGTCACAAGTGAACTTGAGGTCATTATCTCCTTCAGCTaGTGTTTGACAAGATTCCTC +
Preference number: 4 (lower is better)
Translates to: RSQHANRGHILVTSELEVIISFS*CLTRFL
Trigger: GAGGAATCTTGTCAAACAGCAGCTGAAGGAGATAAT...GACCTCAAGTTCACTTGTGACAAGTATGTGTCCTCTGTTTGCATGTTGACTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR GCA 90 bp TTAAACTTCAATGCAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTATTATCTCCTTCAGCTaGTGTTTGACAAGATTCCTC +
Preference number: 4 (lower is better)
Translates to: LNFNAEKLALGSPLLLLCIISFS*CLTRFL
Trigger: GAGGAATCTTGTCAAACAGCAGCTGAAGGAGATAAT...ACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTGCATTGAAGTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR GCA 90 bp ATCTTAATTCAGAGAAGGGTTTATGTACAGATCTTGAGTAAATCTGTGTTCCAGGTCGTGAAAGTCCTCTaGTTTCTGATGTCCGCTCCT +
Preference number: 4 (lower is better)
Translates to: ILIQRRVYVQILSKSVFQVVKVL*FLMSAP
Trigger: AGGAGCGGACATCAGAAAGCAGAGGACTTTCACGAC...CTGGAACACAGATTTACTCAAGATCTGTACATAAACCCTTCTCTGAATTAAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR GCA 90 bp TTAAACTTCAATGCAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTGCTGTGTTTCTGCACTaGTTAATGAATGAAGATCCA +
Preference number: 4 (lower is better)
Translates to: LNFNAEKLALGSPLLLLCAVFLH*LMNEDP
Trigger: TGGATCTTCATTCATTAAGCAGTGCAGAAACACAGC...ACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTGCATTGAAGTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR GCA 90 bp CTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGCCAACAAAGAAACCTTaGAGTGCATGTTCCTGTGTT +
Preference number: 4 (lower is better)
Translates to: LESLKSDYGRLASLSFCWPTKKP*SACSCV
Trigger: AACACAGGAACATGCACTGCAAGGTTTCTTTGTTGG...CCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp AGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAGAAGTTCAATGGTCCAAAAGATTGAGATaGTCACATACTCGTTTAAGC +
Preference number: 4 (lower is better)
Translates to: RGHHTAITQLKPRTEVQWSKRLR*SHTRLS
Trigger: GCTTAAACGAGTATGTGAGCATCTCAATCTTTTGGA...CCATTGAACTTCTGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR GCA 90 bp TCTATACACCAGGCAGGAAAAAGTTGTCTGTCCCTGTACAGCTCAGAAATACTCTCCAAAAGATTGAGATaGTCACATACTCGTTTAAGC +
Preference number: 4 (lower is better)
Translates to: SIHQAGKSCLSLYSSEILSKRLR*SHTRLS
Trigger: GCTTAAACGAGTATGTGAGCATCTCAATCTTTTGGA...GAGTATTTCTGAGCTGTACAGGGACAGACAACTTTTTCCTGCCTGGTGTATAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR GCA 90 bp AAAAATGCACACACCCGAAATGAGTTCAAACCAGCCGAAACAAAACTCAGGCAGTCCAAAAGATTGAGATaGTCACATACTCGTTTAAGC +
Preference number: 4 (lower is better)
Translates to: KNAHTRNEFKPAETKLRQSKRLR*SHTRLS
Trigger: GCTTAAACGAGTATGTGAGCATCTCAATCTTTTGGA...CTGCCTGAGTTTTGTTTCGGCTGGTTTGAACTCATTTCGGGTGTGTGCATTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp CTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGGACCTGTATGACTTATaGAGTTCCATGACCTTCTCT +
Preference number: 4 (lower is better)
Translates to: LESLKSDYGRLASLSFCWDLYDL*SSMTFS
Trigger: AGAGAAGGTCATGGAACTGCATAAGTCATACAGGTC...CCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp CACTGTATCGAAATTTGGATCCTAGCGCAAGAAATTTGCTTTTGGGAATGGTGTGACCTGTATGACTTATaGAGTTCCATGACCTTCTCT +
Preference number: 4 (lower is better)
Translates to: HCIEIWILAQEICFWEWCDLYDL*SSMTFS
Trigger: AGAGAAGGTCATGGAACTGCATAAGTCATACAGGTC...ACACCATTCCCAAAAGCAAATTTCTTGCGCTAGGATCCAAATTTCGATACAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
CDS-3UTR GCA 90 bp AGAAGTCAACATGCAAACAGAGGACACATACTTGTCACAAGTGAACTTGAGGTCTCCTTCCAAGTCCTTTaGTTTATGAAGATCAACTCC +
Preference number: 4 (lower is better)
Translates to: RSQHANRGHILVTSELEVSFQVL*FMKINS
Trigger: GGAGTTGATCTTCATAAAGCAAAGGACTTGGAAGGA...GACCTCAAGTTCACTTGTGACAAGTATGTGTCCTCTGTTTGCATGTTGACTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR GCA 90 bp AATCTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCATGGTACTTTCATACTaGTCTTGCTCTCCAGGCCGA +
Preference number: 4 (lower is better)
Translates to: NLESLKSDYGRLASLSFCMVLSY*SCSPGR
Trigger: TCGGCCTGGAGAGCAAGAGCAGTATGAAAGTACCAT...GCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp AATTGTCCAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCATGGTACTTTCATACTaGTCTTGCTCTCCAGGCCGA +
Preference number: 4 (lower is better)
Translates to: NCPIEKFLFPLQFLYSAIMVLSY*SCSPGR
Trigger: TCGGCCTGGAGAGCAAGAGCAGTATGAAAGTACCAT...GATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTGGACAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR GCA 90 bp CTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGCTAGCGCAAGAAATTTaGTTTTGGGAATGGTGTCTG +
Preference number: 4 (lower is better)
Translates to: LESLKSDYGRLASLSFCWLAQEI*FWEWCL
Trigger: CAGACACCATTCCCAAAAGCAAATTTCTTGCGCTAG...CCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp GGATCAATGAGATCTAGAAGAATCTCTTGGTATAAACTCCCAATAGAAACTGAATTTTTCCACCTTCCATaGTTCTGTGGGCTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: GSMRSRRISWYKLPIETEFFHLP*FCGLWL
Trigger: GAGCCAGAGCCCACAGAAGCATGGAAGGTGGAAAAA...TTCAGTTTCTATTGGGAGTTTATACCAAGAGATTCTTCTAGATCTCATTGATCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000349460.9
ENST00000373798.5
ENST00000642937.2
ENST00000643155.1
CDS-3UTR GCA 90 bp GACATTAACCAAATCATCCATATTGGTACATTCAAGTGCCATAAAAAGCAAGCTTTTTTCCACCTTCCATaGTTCTGTGGGCTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: DINQIIHIGTFKCHKKQAFFHLP*FCGLWL
Trigger: GAGCCAGAGCCCACAGAAGCATGGAAGGTGGAAAAA...AGCTTGCTTTTTATGGCACTTGAATGTACCAATATGGATGATTTGGTTAATGTC
41% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 7 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR GCA 90 bp TTCAACACAAGTACACGAACAAACAGGTCTGAAGTATATCAGGAAAACAAAGTATTTTTCCACCTTCCATaGTTCTGTGGGCTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: FNTSTRTNRSEVYQENKVFFHLP*FCGLWL
Trigger: GAGCCAGAGCCCACAGAAGCATGGAAGGTGGAAAAA...TACTTTGTTTTCCTGATATACTTCAGACCTGTTTGTTCGTGTACTTGTGTTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR GCA 90 bp GAGACATTAACCAAATCATCCATATTGGTACATTCAAGTGCCATAAAAAGCAAGTTTTTCCACCTTCCATaGTTCTGTGGGCTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: ETLTKSSILVHSSAIKSKFFHLP*FCGLWL
Trigger: GAGCCAGAGCCCACAGAAGCATGGAAGGTGGAAAAA...CTTGCTTTTTATGGCACTTGAATGTACCAATATGGATGATTTGGTTAATGTCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR GCA 90 bp CTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGTCTCCTGTGGGGATTTaGCCATTGATGTTAAGAGTT +
Preference number: 4 (lower is better)
Translates to: LESLKSDYGRLASLSFCWSPVGI*PLMLRV
Trigger: AACTCTTAACATCAATGGGCAAATCCCCACAGGAGA...CCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
CDS-3UTR GCA 90 bp GGATCAATGAGATCTAGAAGAATCTCTTGGTATAAACTCCCAATAGAAACTGAATTTGAGTTGTGGTGGTaGTGCTTGGGGTCTCAGATG +
Preference number: 4 (lower is better)
Translates to: GSMRSRRISWYKLPIETEFELWW*CLGSQM
Trigger: CATCTGAGACCCCAAGCAGCACCACCACAACTCAAA...TTCAGTTTCTATTGGGAGTTTATACCAAGAGATTCTTCTAGATCTCATTGATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp CAGATATCTGAAGCAACTTCCATGTCTTTGACCCAAAGAAGCTCCAAAAAGAAAATCAGGCAGTGGGCATaGACTACATGTTCGTTTGAT +
Preference number: 4 (lower is better)
Translates to: QISEATSMSLTQRSSKKKIRQWA*TTCSFD
Trigger: ATCAAACGAACATGTAGTGCATGCCCACTGCCTGAT...TTTCTTTTTGGAGCTTCTTTGGGTCAAAGACATGGAAGTTGCTTCAGATATCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR GCA 90 bp GAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGTTTTATAAATACAGGTCTTaGTTTGTGGGTGGGTGCCAG +
Preference number: 4 (lower is better)
Translates to: ESLKSDYGRLASLSFCWFYKYRS*FVGGCQ
Trigger: CTGGCACCCACCCACAAAGCAAGACCTGTATTTATA...AAACCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR GCA 90 bp AATCTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTCTCTTTTTCTTCCATaGTTCTGTGGGCTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: NLESLKSDYGRLASLSFCSLFLP*FCGLWL
Trigger: GAGCCAGAGCCCACAGAAGCATGGAAGAAAAAGAGA...GCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373800.7
CDS-3UTR GCA 90 bp ACTATCAAGATCAGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAATTTCTTCATTTTCTTaGTGGGGCAAGGCTCTTTCA +
Preference number: 4 (lower is better)
Translates to: TIKIRGHHTAITQLKPRTISSFS*WGKALS
Trigger: TGAAAGAGCCTTGCCCCAGCAAGAAAATGAAGAAAT...TGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCTGATCTTGATAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR GCA 90 bp TTCAACACAAGTACACGAACAAACAGGTCTGAAGTATATCAGGAAAACAAAGTACTTTGGGCAGTCCATTaGTACTCCTTTGTACCCCAC +
Preference number: 4 (lower is better)
Translates to: FNTSTRTNRSEVYQENKVLWAVH*YSFVPH
Trigger: GTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAG...TACTTTGTTTTCCTGATATACTTCAGACCTGTTTGTTCGTGTACTTGTGTTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR GCA 90 bp ACTCCTTTGTACCCCACAATACATACTCTACAAAGAGTAACATTTGACAGAAAACTTTGGGCAGTCCATTaGTACTCCTTTGTACCCCAC +
Preference number: 4 (lower is better)
Translates to: TPLYPTIHTLQRVTFDRKLWAVH*YSFVPH
Trigger: GTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAG...TTTTCTGTCAAATGTTACTCTTTGTAGAGTATGTATTGTGGGGTACAAAGGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR GCA 90 bp TCTATACACCAGGCAGGAAAAAGTTGTCTGTCCCTGTACAGCTCAGAAATACTCGGAAGATTACCAACCTaGCATATGCTTAATTCTGAT +
Preference number: 4 (lower is better)
Translates to: SIHQAGKSCLSLYSSEILGRLPT*HMLNSD
Trigger: ATCAGAATTAAGCATATGGCAGGTTGGTAATCTTCC...GAGTATTTCTGAGCTGTACAGGGACAGACAACTTTTTCCTGCCTGGTGTATAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR GCA 90 bp AGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAGAAGTTCAATGGGGAAGATTACCAACCTaGCATATGCTTAATTCTGAT +
Preference number: 4 (lower is better)
Translates to: RGHHTAITQLKPRTEVQWGRLPT*HMLNSD
Trigger: ATCAGAATTAAGCATATGGCAGGTTGGTAATCTTCC...CCATTGAACTTCTGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR GCA 90 bp GGCAGGAAAAAGTTGTCTGTCCCTGTACAGCTCAGAAATACTCATAAAAAGGCCGGAAGATTACCAACCTaGCATATGCTTAATTCTGAT +
Preference number: 4 (lower is better)
Translates to: GRKKLSVPVQLRNTHKKAGRLPT*HMLNSD
Trigger: ATCAGAATTAAGCATATGGCAGGTTGGTAATCTTCC...GGCCTTTTTATGAGTATTTCTGAGCTGTACAGGGACAGACAACTTTTTCCTGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR GCA 90 bp GAAGTCAACATGCAAACAGAGGACACATACTTGTCACAAGTGAACTTGAGGTCACACTGGCTTTCCCCTTaGTATGTTATTTATTCTTCC +
Preference number: 4 (lower is better)
Translates to: EVNMQTEDTYLSQVNLRSHWLSP*YVIYSS
Trigger: GGAAGAATAAATAACATAGCAAGGGGAAAGCCAGTG...TGACCTCAAGTTCACTTGTGACAAGTATGTGTCCTCTGTTTGCATGTTGACTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR GCA 90 bp AGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAGTCAAGACAGCACGTTCCTGTGTCTaGTTTCACAGTAGAAGATCA +
Preference number: 4 (lower is better)
Translates to: RSFYSPCNFCTLLSIVKTARSCV*FHSRRS
Trigger: TGATCTTCTACTGTGAAAGCAGACACAGGAACGTGC...TGTCTTGACTATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR GCA 90 bp ATTGTCCAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCGCACGTTCCTGTGTCTaGTTTCACAGTAGAAGATCA +
Preference number: 4 (lower is better)
Translates to: IVQLRSFYSPCNFCTLLSARSCV*FHSRRS
Trigger: TGATCTTCTACTGTGAAAGCAGACACAGGAACGTGC...GGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTGGACAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR GCA 90 bp CAGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAGAAGTTCAATGTCTGTGTTTCTGCACTaGTTAATGAATGAAGATCCA +
Preference number: 4 (lower is better)
Translates to: QRASYSNNTVEAKDRSSMSVFLH*LMNEDP
Trigger: TGGATCTTCATTCATTAAGCAGTGCAGAAACACAGA...CATTGAACTTCTGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644780.1
CDS-3UTR CCA 90 bp GCCACATTCCTTGTCATTTGGGATGAAAGAAAGGCCCAGGATCAGACAGAAGTACTTTTACTTCTATTTTaGAGCACTCTTCAAGTCCTT +
Preference number: 4 (lower is better)
Translates to: ATFLVIWDERKAQDQTEVLLLLF*STLQVL
Trigger: AAGGACTTGAAGAGTGCTCCAAAATAGAAGTAAAAG...TACTTCTGTCTGATCCTGGGCCTTTCTTTCATCCCAAATGACAAGGAATGTGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp AGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAGAAGTTCAATGGTTGCGTTATCCCAAATaGCTAGACCAAAATAGTCTT +
Preference number: 4 (lower is better)
Translates to: RGHHTAITQLKPRTEVQWLRYPK*LDQNSL
Trigger: AAGACTATTTTGGTCTAGCCATTTGGGATAACGCAA...CCATTGAACTTCTGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CCA 90 bp AAAAATGCACACACCCGAAATGAGTTCAAACCAGCCGAAACAAAACTCAGGCAGTTGCGTTATCCCAAATaGCTAGACCAAAATAGTCTT +
Preference number: 4 (lower is better)
Translates to: KNAHTRNEFKPAETKLRQLRYPK*LDQNSL
Trigger: AAGACTATTTTGGTCTAGCCATTTGGGATAACGCAA...CTGCCTGAGTTTTGTTTCGGCTGGTTTGAACTCATTTCGGGTGTGTGCATTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp TCTATACACCAGGCAGGAAAAAGTTGTCTGTCCCTGTACAGCTCAGAAATACTCCTGTGCTGGGTCAGGTaGATAAAACTTTACATTAAA +
Preference number: 4 (lower is better)
Translates to: SIHQAGKSCLSLYSSEILLCWVR*IKLYIK
Trigger: TTTAATGTAAAGTTTTATCCACCTGACCCAGCACAG...GAGTATTTCTGAGCTGTACAGGGACAGACAACTTTTTCCTGCCTGGTGTATAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CCA 90 bp TCCATTAGAGCTTTTGGCCCAAAGTGCCTATTTTTCTGTGAGATTTGGTCTCCTCCAGTTCAGACTGGATaGTGTAAGAACCTAATAATG +
Preference number: 4 (lower is better)
Translates to: SIRAFGPKCLFFCEIWSPPVQTG*CKNLIM
Trigger: CATTATTAGGTTCTTACACCATCCAGTCTGAACTGG...AGGAGACCAAATCTCACAGAAAAATAGGCACTTTGGGCCAAAAGCTCTAATGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp TTAAACTTCAATGCAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTCCAGTTCAGACTGGATaGTGTAAGAACCTAATAATG +
Preference number: 4 (lower is better)
Translates to: LNFNAEKLALGSPLLLLCPVQTG*CKNLIM
Trigger: CATTATTAGGTTCTTACACCATCCAGTCTGAACTGG...ACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTGCATTGAAGTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CCA 90 bp AGTTCTCAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTCCTATAATTGCACCAGTTCAGACTGGATaGTGTAAGAACCTAATAATG +
Preference number: 4 (lower is better)
Translates to: SSQRLIIYWWLQIAPIIAPVQTG*CKNLIM
Trigger: CATTATTAGGTTCTTACACCATCCAGTCTGAACTGG...TGCAATTATAGGAGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTGAGAACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648181.1
ENST00000648891.1
CDS-3UTR CCA 90 bp ATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAGTCAACCTGAGCTGGAGTCATaGACCTGTATGACTTATGCA +
Preference number: 4 (lower is better)
Translates to: IEKFLFPLQFLYSAIHSQPELES*TCMTYA
Trigger: TGCATAAGTCATACAGGTCCATGACTCCAGCTCAGG...TTGACTATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR CCA 90 bp AGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAGAAGTTCAATGGCACTGTATCGAAATTTaGATCCTAGCGCAAGAAATT +
Preference number: 4 (lower is better)
Translates to: RGHHTAITQLKPRTEVQWHCIEI*ILAQEI
Trigger: AATTTCTTGCGCTAGGATCCAAATTTCGATACAGTG...CCATTGAACTTCTGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CCA 90 bp GGATCAATGAGATCTAGAAGAATCTCTTGGTATAAACTCCCAATAGAAACTGAACTCAGCTTGCTCAGGTaGCTCGTCTTCCTTTTTCAC +
Preference number: 4 (lower is better)
Translates to: GSMRSRRISWYKLPIETELSLLR*LVFLFH
Trigger: GTGAAAAAGGAAGACGAGCCACCTGAGCAAGCTGAG...TTCAGTTTCTATTGGGAGTTTATACCAAGAGATTCTTCTAGATCTCATTGATCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp TTCAACACAAGTACACGAACAAACAGGTCTGAAGTATATCAGGAAAACAAAGTACTCAGCTTGCTCAGGTaGCTCGTCTTCCTTTTTCAC +
Preference number: 4 (lower is better)
Translates to: FNTSTRTNRSEVYQENKVLSLLR*LVFLFH
Trigger: GTGAAAAAGGAAGACGAGCCACCTGAGCAAGCTGAG...TACTTTGTTTTCCTGATATACTTCAGACCTGTTTGTTCGTGTACTTGTGTTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CCA 90 bp ACTCCTTTGTACCCCACAATACATACTCTACAAAGAGTAACATTTGACAGAAAACTCAGCTTGCTCAGGTaGCTCGTCTTCCTTTTTCAC +
Preference number: 4 (lower is better)
Translates to: TPLYPTIHTLQRVTFDRKLSLLR*LVFLFH
Trigger: GTGAAAAAGGAAGACGAGCCACCTGAGCAAGCTGAG...TTTTCTGTCAAATGTTACTCTTTGTAGAGTATGTATTGTGGGGTACAAAGGAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CCA 90 bp GACATTAACCAAATCATCCATATTGGTACATTCAAGTGCCATAAAAAGCAAGCTCTCAGCTTGCTCAGGTaGCTCGTCTTCCTTTTTCAC +
Preference number: 4 (lower is better)
Translates to: DINQIIHIGTFKCHKKQALSLLR*LVFLFH
Trigger: GTGAAAAAGGAAGACGAGCCACCTGAGCAAGCTGAG...AGCTTGCTTTTTATGGCACTTGAATGTACCAATATGGATGATTTGGTTAATGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CCA 90 bp GGATCAATGAGATCTAGAAGAATCTCTTGGTATAAACTCCCAATAGAAACTGAAGGTCACCATTTGAGGTaGGTACTGTCACCTCGATGT +
Preference number: 4 (lower is better)
Translates to: GSMRSRRISWYKLPIETEGHHLR*VLSPRC
Trigger: ACATCGAGGTGACAGTACCCACCTCAAATGGTGACC...TTCAGTTTCTATTGGGAGTTTATACCAAGAGATTCTTCTAGATCTCATTGATCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000349460.9
ENST00000373798.5
ENST00000642937.2
ENST00000643155.1
CDS-3UTR CCA 90 bp GACATTAACCAAATCATCCATATTGGTACATTCAAGTGCCATAAAAAGCAAGCTGGTCACCATTTGAGGTaGGTACTGTCACCTCGATGT +
Preference number: 4 (lower is better)
Translates to: DINQIIHIGTFKCHKKQAGHHLR*VLSPRC
Trigger: ACATCGAGGTGACAGTACCCACCTCAAATGGTGACC...AGCTTGCTTTTTATGGCACTTGAATGTACCAATATGGATGATTTGGTTAATGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CCA 90 bp ATATTGGCAGTGTTACCTTTAGGTAATACAAAGCTGGAATGCCCAATATTTTTCGGTCACCATTTGAGGTaGGTACTGTCACCTCGATGT +
Preference number: 4 (lower is better)
Translates to: ILAVLPLGNTKLECPIFFGHHLR*VLSPRC
Trigger: ACATCGAGGTGACAGTACCCACCTCAAATGGTGACC...GAAAAATATTGGGCATTCCAGCTTTGTATTACCTAAAGGTAACACTGCCAATAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644342.1
ENST00000646800.1
CDS-3UTR CCA 90 bp AATCTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCACTAGGCCGTGGTTCTaGTACAGACTCCATGAAGTT +
Preference number: 4 (lower is better)
Translates to: NLESLKSDYGRLASLSFCTRPWF*YRLHEV
Trigger: AACTTCATGGAGTCTGTACCAGAACCACGGCCTAGT...GCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
CDS-3UTR CCA 90 bp GGATCAATGAGATCTAGAAGAATCTCTTGGTATAAACTCCCAATAGAAACTGAACCATTCACTAGGCCGTaGTTCTGGTACAGACTCCAT +
Preference number: 4 (lower is better)
Translates to: GSMRSRRISWYKLPIETEPFTRP*FWYRLH
Trigger: ATGGAGTCTGTACCAGAACCACGGCCTAGTGAATGG...TTCAGTTTCTATTGGGAGTTTATACCAAGAGATTCTTCTAGATCTCATTGATCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
CDS-3UTR CCA 90 bp ATCTTAATTCAGAGAAGGGTTTATGTACAGATCTTGAGTAAATCTGTGTTCCAGCCATTCACTAGGCCGTaGTTCTGGTACAGACTCCAT +
Preference number: 4 (lower is better)
Translates to: ILIQRRVYVQILSKSVFQPFTRP*FWYRLH
Trigger: ATGGAGTCTGTACCAGAACCACGGCCTAGTGAATGG...CTGGAACACAGATTTACTCAAGATCTGTACATAAACCCTTCTCTGAATTAAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CCA 90 bp ACTCCTTTGTACCCCACAATACATACTCTACAAAGAGTAACATTTGACAGAAAACCATTCACTAGGCCGTaGTTCTGGTACAGACTCCAT +
Preference number: 4 (lower is better)
Translates to: TPLYPTIHTLQRVTFDRKPFTRP*FWYRLH
Trigger: ATGGAGTCTGTACCAGAACCACGGCCTAGTGAATGG...TTTTCTGTCAAATGTTACTCTTTGTAGAGTATGTATTGTGGGGTACAAAGGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CCA 90 bp GAGACATTAACCAAATCATCCATATTGGTACATTCAAGTGCCATAAAAAGCAAGCCATTCACTAGGCCGTaGTTCTGGTACAGACTCCAT +
Preference number: 4 (lower is better)
Translates to: ETLTKSSILVHSSAIKSKPFTRP*FWYRLH
Trigger: ATGGAGTCTGTACCAGAACCACGGCCTAGTGAATGG...CTTGCTTTTTATGGCACTTGAATGTACCAATATGGATGATTTGGTTAATGTCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CCA 90 bp GAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGTTTGGAAGGGTGAGTGAGTaGATAAGCGTTTATCCCATT +
Preference number: 4 (lower is better)
Translates to: ESLKSDYGRLASLSFCWFGRVSE*ISVYPI
Trigger: AATGGGATAAACGCTTATCCACTCACTCACCCTTCC...AAACCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
CDS-3UTR CCA 90 bp AGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAGTCAAGACAGGAAGGGTGAGTGAGTaGATAAGCGTTTATCCCATT +
Preference number: 4 (lower is better)
Translates to: RSFYSPCNFCTLLSIVKTGRVSE*ISVYPI
Trigger: AATGGGATAAACGCTTATCCACTCACTCACCCTTCC...TGTCTTGACTATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644470.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR CCA 90 bp GTCCAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAGGAAGGGTGAGTGAGTaGATAAGCGTTTATCCCATT +
Preference number: 4 (lower is better)
Translates to: VQLRSFYSPCNFCTLLSIGRVSE*ISVYPI
Trigger: AATGGGATAAACGCTTATCCACTCACTCACCCTTCC...TATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTGGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644470.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR CCA 90 bp GAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGTTTAGGGACGTCTTTGGTTaGGATTTCACTTTTCACAGC +
Preference number: 4 (lower is better)
Translates to: ESLKSDYGRLASLSFCWFRDVFG*DFTFHS
Trigger: GCTGTGAAAAGTGAAATCCCAACCAAAGACGTCCCT...AAACCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp CAGATATCTGAAGCAACTTCCATGTCTTTGACCCAAAGAAGCTCCAAAAAGAAAAGGGACGTCTTTGGTTaGGATTTCACTTTTCACAGC +
Preference number: 4 (lower is better)
Translates to: QISEATSMSLTQRSSKKKRDVFG*DFTFHS
Trigger: GCTGTGAAAAGTGAAATCCCAACCAAAGACGTCCCT...TTTCTTTTTGGAGCTTCTTTGGGTCAAAGACATGGAAGTTGCTTCAGATATCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp AATCTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTCATGTGGTGTCTTGTaGGGAGAACGGCTCCTAAAA +
Preference number: 4 (lower is better)
Translates to: NLESLKSDYGRLASLSFCSCGVL*GERLLK
Trigger: TTTTAGGAGCCGTTCTCCCCACAAGACACCACATGA...GCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp AAAAATGCACACACCCGAAATGAGTTCAAACCAGCCGAAACAAAACTCAGGCAGTGTTCATGTCTCACATaGGTACCAAAAGAAAAATGC +
Preference number: 4 (lower is better)
Translates to: KNAHTRNEFKPAETKLRQCSCLT*VPKEKC
Trigger: GCATTTTTCTTTTGGTACCCATGTGAGACATGAACA...CTGCCTGAGTTTTGTTTCGGCTGGTTTGAACTCATTTCGGGTGTGTGCATTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp TTCCCTCCATTTTCACAATTGGTCATGTGGACAAAGTACTCACTCCTTCTCCTGCTCCATTTTCACAATTaGTCATGTGGACAAAGTACT +
Preference number: 4 (lower is better)
Translates to: FPPFSQLVMWTKYSLLLLLHFHN*SCGQST
Trigger: AGTACTTTGTCCACATGACCAATTGTGAAAATGGAG...CAGGAGAAGGAGTGAGTACTTTGTCCACATGACCAATTGTGAAAATGGAGGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642643.1
ENST00000648891.1
CDS-3UTR CCA 90 bp GTCCAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAGTGATCCTCAGGGATTaGAATAGAAACCTTGGGAAG +
Preference number: 4 (lower is better)
Translates to: VQLRSFYSPCNFCTLLSIVILRD*NRNLGK
Trigger: CTTCCCAAGGTTTCTATTCCAATCCCTGAGGATCAC...TATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTGGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR CCA 90 bp GACATTAACCAAATCATCCATATTGGTACATTCAAGTGCCATAAAAAGCAAGCTCAGAAAAGCTGGCTTTaGGCAGTCCATTGCTACTCC +
Preference number: 4 (lower is better)
Translates to: DINQIIHIGTFKCHKKQAQKSWL*AVHCYS
Trigger: GGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTG...AGCTTGCTTTTTATGGCACTTGAATGTACCAATATGGATGATTTGGTTAATGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CCA 90 bp ATATTGGCAGTGTTACCTTTAGGTAATACAAAGCTGGAATGCCCAATATTTTTCCAGAAAAGCTGGCTTTaGGCAGTCCATTGCTACTCC +
Preference number: 4 (lower is better)
Translates to: ILAVLPLGNTKLECPIFFQKSWL*AVHCYS
Trigger: GGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTG...GAAAAATATTGGGCATTCCAGCTTTGTATTACCTAAAGGTAACACTGCCAATAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644342.1
ENST00000646800.1
CDS-3UTR CCA 90 bp ATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAGTCAATCAATGCAGAAAAGCTaGCTTTGGGCAGTCCATTGC +
Preference number: 4 (lower is better)
Translates to: IEKFLFPLQFLYSAIHSQSMQKS*LWAVHC
Trigger: GCAATGGACTGCCCAAAGCCAGCTTTTCTGCATTGA...TTGACTATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR CCA 90 bp AGAAGTCAACATGCAAACAGAGGACACATACTTGTCACAAGTGAACTTGAGGTCCTGCCAATCACTAATTaGGCAATGCCAATAATGAAG +
Preference number: 4 (lower is better)
Translates to: RSQHANRGHILVTSELEVLPITN*AMPIMK
Trigger: CTTCATTATTGGCATTGCCCAATTAGTGATTGGCAG...GACCTCAAGTTCACTTGTGACAAGTATGTGTCCTCTGTTTGCATGTTGACTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR CCA 90 bp GAAGTCAACATGCAAACAGAGGACACATACTTGTCACAAGTGAACTTGAGGTCACTGCCAATCACTAATTaGGCAATGCCAATAATGAAG +
Preference number: 4 (lower is better)
Translates to: EVNMQTEDTYLSQVNLRSLPITN*AMPIMK
Trigger: CTTCATTATTGGCATTGCCCAATTAGTGATTGGCAG...TGACCTCAAGTTCACTTGTGACAAGTATGTGTCCTCTGTTTGCATGTTGACTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR CCA 90 bp AAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAATACATACTGATGTGCAAAGGATTTaGAAGTATCTTTTAGACACT +
Preference number: 4 (lower is better)
Translates to: KAGFGQSIATPLYPTIHTDVQRI*KYLLDT
Trigger: AGTGTCTAAAAGATACTTCCAAATCCTTTGCACATC...AGTATGTATTGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR CCA 90 bp GACATTAACCAAATCATCCATATTGGTACATTCAAGTGCCATAAAAAGCAAGCTCCATGTTGCACAGGCTaGTCTCAAATTCCTGACCTC +
Preference number: 4 (lower is better)
Translates to: DINQIIHIGTFKCHKKQAPCCTG*SQIPDL
Trigger: GAGGTCAGGAATTTGAGACCAGCCTGTGCAACATGG...AGCTTGCTTTTTATGGCACTTGAATGTACCAATATGGATGATTTGGTTAATGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644342.1
ENST00000646800.1
CDS-3UTR CCA 90 bp CAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTCCTATAATTGCACTGGGTACCTCTACTGGCTTATaGTCAGTTTATAAACATACA +
Preference number: 4 (lower is better)
Translates to: QRLIIYWWLQIAPIIALGTSTGL*SVYKHT
Trigger: TGTATGTTTATAAACTGACCATAAGCCAGTAGAGGT...ACCCAGTGCAATTATAGGAGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648181.1
ENST00000648891.1
CDS-3UTR TCA 90 bp GGATCAATGAGATCTAGAAGAATCTCTTGGTATAAACTCCCAATAGAAACTGAAAAGTCCTCTGCTTTCTaGTGTCCGCTCCTTGTTCTT +
Preference number: 4 (lower is better)
Translates to: GSMRSRRISWYKLPIETEKSSAF*CPLLVL
Trigger: AAGAACAAGGAGCGGACATCAGAAAGCAGAGGACTT...TTCAGTTTCTATTGGGAGTTTATACCAAGAGATTCTTCTAGATCTCATTGATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp AATCTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCGAGATTTGGGCCTTTTaGGAAACGAGGAGAATAGTC +
Preference number: 4 (lower is better)
Translates to: NLESLKSDYGRLASLSFCEIWAF*ETRRIV
Trigger: GACTATTCTCCTCGTTTCTCAAAAGGCCCAAATCTC...GCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp GAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGTTTGCACTGCTTAATGAATaGAGATCCAAAGATGGGTCT +
Preference number: 4 (lower is better)
Translates to: ESLKSDYGRLASLSFCWFALLNE*RSKDGS
Trigger: AGACCCATCTTTGGATCTTCATTCATTAAGCAGTGC...AAACCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp GGATCAATGAGATCTAGAAGAATCTCTTGGTATAAACTCCCAATAGAAACTGAAAATCTGGATCTTCTCTaGGTTCTTCCTGAGCAGGCT +
Preference number: 4 (lower is better)
Translates to: GSMRSRRISWYKLPIETENLDLL*VLPEQA
Trigger: AGCCTGCTCAGGAAGAACTCAGAGAAGATCCAGATT...TTCAGTTTCTATTGGGAGTTTATACCAAGAGATTCTTCTAGATCTCATTGATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp CTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGCTTCTTCCAAAAGATTaGGATGCTCACATACTCGTT +
Preference number: 4 (lower is better)
Translates to: LESLKSDYGRLASLSFCWLLPKD*DAHILV
Trigger: AACGAGTATGTGAGCATCTCAATCTTTTGGAAGAAG...CCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000343067.9
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp AATCTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTCAAGTTCCTTGGTCTaGTTCGGGGCCAGTTTAAAA +
Preference number: 4 (lower is better)
Translates to: NLESLKSDYGRLASLSFCSSSLV*FGASLK
Trigger: TTTTAAACTGGCCCCGAATCAGACCAAGGAACTTGA...GCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp AATTGTCCAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCTCAAGTTCCTTGGTCTaGTTCGGGGCCAGTTTAAAA +
Preference number: 4 (lower is better)
Translates to: NCPIEKFLFPLQFLYSAISSSLV*FGASLK
Trigger: TTTTAAACTGGCCCCGAATCAGACCAAGGAACTTGA...GATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTGGACAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR TCA 90 bp GGACACATACTTGTCACAAGTGAACTTGAGGTCACAAAGCCATTGATTAAAAACACTTATGCAGTTCCATaGCCTTCTCTTCAAGTTCCT +
Preference number: 4 (lower is better)
Translates to: GHILVTSELEVTKPLIKNTYAVP*PSLQVP
Trigger: AGGAACTTGAAGAGAAGGTCATGGAACTGCATAAGT...GTTTTTAATCAATGGCTTTGTGACCTCAAGTTCACTTGTGACAAGTATGTGTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp CAGATATCTGAAGCAACTTCCATGTCTTTGACCCAAAGAAGCTCCAAAAAGAAAACTTATGCAGTTCCATaGCCTTCTCTTCAAGTTCCT +
Preference number: 4 (lower is better)
Translates to: QISEATSMSLTQRSSKKKTYAVP*PSLQVP
Trigger: AGGAACTTGAAGAGAAGGTCATGGAACTGCATAAGT...TTTCTTTTTGGAGCTTCTTTGGGTCAAAGACATGGAAGTTGCTTCAGATATCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp ATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAGTCAAAGTCATGGACCTGTATaGCTTATGCAGTTCCATGAC +
Preference number: 4 (lower is better)
Translates to: IEKFLFPLQFLYSAIHSQSHGPV*LMQFHD
Trigger: GTCATGGAACTGCATAAGTCATACAGGTCCATGACT...TTGACTATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR TCA 90 bp ATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAGTCAAAGCAGACACCTAGGATaGTATCTACTCCTTCCAAGT +
Preference number: 4 (lower is better)
Translates to: IEKFLFPLQFLYSAIHSQSRHLG*YLLLPS
Trigger: ACTTGGAAGGAGTAGATATCATCCTAGGTGTCTGCT...TTGACTATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR TCA 90 bp GAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGTTTGGTAACTGGGAAGTTTaGATCCGATGGTACTTTCAT +
Preference number: 4 (lower is better)
Translates to: ESLKSDYGRLASLSFCWFGNWEV*IRWYFH
Trigger: ATGAAAGTACCATCGGATTCAAACTTCCCAGTTACC...AAACCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp ATTGTCCAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCGGTAACTGGGAAGTTTaGATCCGATGGTACTTTCAT +
Preference number: 4 (lower is better)
Translates to: IVQLRSFYSPCNFCTLLSGNWEV*IRWYFH
Trigger: ATGAAAGTACCATCGGATTCAAACTTCCCAGTTACC...GGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTGGACAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR TCA 90 bp GTCCAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAGGTAACTGGGAAGTTTaGATCCGATGGTACTTTCAT +
Preference number: 4 (lower is better)
Translates to: VQLRSFYSPCNFCTLLSIGNWEV*IRWYFH
Trigger: ATGAAAGTACCATCGGATTCAAACTTCCCAGTTACC...TATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTGGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR TCA 90 bp AGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAGTCAAGACAGGTAACTGGGAAGTTTaGATCCGATGGTACTTTCAT +
Preference number: 4 (lower is better)
Translates to: RSFYSPCNFCTLLSIVKTGNWEV*IRWYFH
Trigger: ATGAAAGTACCATCGGATTCAAACTTCCCAGTTACC...TGTCTTGACTATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR TCA 90 bp GGACACATACTTGTCACAAGTGAACTTGAGGTCACAAAGCCATTGATTAAAAACGGTAACTGGGAAGTTTaGATCCGATGGTACTTTCAT +
Preference number: 4 (lower is better)
Translates to: GHILVTSELEVTKPLIKNGNWEV*IRWYFH
Trigger: ATGAAAGTACCATCGGATTCAAACTTCCCAGTTACC...GTTTTTAATCAATGGCTTTGTGACCTCAAGTTCACTTGTGACAAGTATGTGTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp TCCATTAGAGCTTTTGGCCCAAAGTGCCTATTTTTCTGTGAGATTTGGTCTCCTAATCTGAAAAACGTGTaGTGTTCTACACAGACTTTC +
Preference number: 4 (lower is better)
Translates to: SIRAFGPKCLFFCEIWSPNLKNV*CSTQTF
Trigger: GAAAGTCTGTGTAGAACATCACACGTTTTTCAGATT...AGGAGACCAAATCTCACAGAAAAATAGGCACTTTGGGCCAAAAGCTCTAATGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp TTAGGGGCCTCCTTGGTTTACTATATAATTGTGGGGAACCAGTCCAGATATTTCAATCTGAAAAACGTGTaGTGTTCTACACAGACTTTC +
Preference number: 4 (lower is better)
Translates to: LGASLVYYIIVGNQSRYFNLKNV*CSTQTF
Trigger: GAAAGTCTGTGTAGAACATCACACGTTTTTCAGATT...GAAATATCTGGACTGGTTCCCCACAATTATATAGTAAACCAAGGAGGCCCCTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000645184.1
ENST00000648181.1
CDS-3UTR TCA 90 bp CTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGTTTTTGATCTCCTCTTaGCTCTTGTCTAAATCCTCC +
Preference number: 4 (lower is better)
Translates to: LESLKSDYGRLASLSFCWFLISS*LLSKSS
Trigger: GGAGGATTTAGACAAGAGTCAAGAGGAGATCAAAAA...CCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
CDS-3UTR TCA 90 bp CTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGTCTTTTTCAGCTCACTaGTGCTGGCATGATGTTTTT +
Preference number: 4 (lower is better)
Translates to: LESLKSDYGRLASLSFCWSFSAH*CWHDVF
Trigger: AAAAACATCATGCCAGCATCAGTGAGCTGAAAAAGA...CCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
CDS-3UTR TCA 90 bp AATCTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCCTGGTACAGACTCCATaGAGTTCTTTTTCAGCTCAC +
Preference number: 4 (lower is better)
Translates to: NLESLKSDYGRLASLSFCLVQTP*SSFSAH
Trigger: GTGAGCTGAAAAAGAACTTCATGGAGTCTGTACCAG...GCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAGATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
CDS-3UTR TCA 90 bp ATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAGTCAACTGGTACAGACTCCATaGAGTTCTTTTTCAGCTCAC +
Preference number: 4 (lower is better)
Translates to: IEKFLFPLQFLYSAIHSQLVQTP*SSFSAH
Trigger: GTGAGCTGAAAAAGAACTTCATGGAGTCTGTACCAG...TTGACTATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644470.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR TCA 90 bp AATTGTCCAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCTGGTACAGACTCCATaGAGTTCTTTTTCAGCTCAC +
Preference number: 4 (lower is better)
Translates to: NCPIEKFLFPLQFLYSAILVQTP*SSFSAH
Trigger: GTGAGCTGAAAAAGAACTTCATGGAGTCTGTACCAG...GATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTGGACAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644470.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR TCA 90 bp CAGATATCTGAAGCAACTTCCATGTCTTTGACCCAAAGAAGCTCCAAAAAGAAAAGCATTGGCATTATCTaGGATGGTGACAGTTTGTGT +
Preference number: 4 (lower is better)
Translates to: QISEATSMSLTQRSSKKKSIGII*DGDSLC
Trigger: ACACAAACTGTCACCATCTCAGATAATGCCAATGCT...TTTCTTTTTGGAGCTTCTTTGGGTCAAAGACATGGAAGTTGCTTCAGATATCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp GAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGTTTAGCATTGGCATTATCTaGGATGGTGACAGTTTGTGT +
Preference number: 4 (lower is better)
Translates to: ESLKSDYGRLASLSFCWFSIGII*DGDSLC
Trigger: ACACAAACTGTCACCATCTCAGATAATGCCAATGCT...AAACCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp AATCTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTCAGATGTGATAGTTTaGGCTGTCAGCAAGACTCCT +
Preference number: 4 (lower is better)
Translates to: NLESLKSDYGRLASLSFCSDVIV*AVSKTP
Trigger: AGGAGTCTTGCTGACAGCTCAAACTATCACATCTGA...GCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp AATCTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCACAGTCTTGGTAATTTaGGTTGTGGTGGTGCTGCTT +
Preference number: 4 (lower is better)
Translates to: NLESLKSDYGRLASLSFCTVLVI*VVVVLL
Trigger: AAGCAGCACCACCACAACTCAAATTACCAAGACTGT...GCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp AATCTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCGCTTGTACAAGGACCTaGTCATGGTCAATATCAGCA +
Preference number: 4 (lower is better)
Translates to: NLESLKSDYGRLASLSFCACTRT*SWSISA
Trigger: TGCTGATATTGACCATGATCAGGTCCTTGTACAAGC...GCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp CTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGATAATCTTGAAAGTCTaGAGTCTGACTATGGCAGGT +
Preference number: 4 (lower is better)
Translates to: LESLKSDYGRLASLSFCWIILKV*SLTMAG
Trigger: ACCTGCCATAGTCAGACTTCAGACTTTCAAGATTAT...CCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp CAGATATCTGAAGCAACTTCCATGTCTTTGACCCAAAGAAGCTCCAAAAAGAAACAACTTCCATGTCTTTaGCCCAAAGAAGCTCCAAAA +
Preference number: 4 (lower is better)
Translates to: QISEATSMSLTQRSSKKKQLPCL*PKEAPK
Trigger: TTTTGGAGCTTCTTTGGGTCAAAGACATGGAAGTTG...TTTCTTTTTGGAGCTTCTTTGGGTCAAAGACATGGAAGTTGCTTCAGATATCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp GAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGTTTCAACTTCCATGTCTTTaGCCCAAAGAAGCTCCAAAA +
Preference number: 4 (lower is better)
Translates to: ESLKSDYGRLASLSFCWFQLPCL*PKEAPK
Trigger: TTTTGGAGCTTCTTTGGGTCAAAGACATGGAAGTTG...AAACCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp GGATCAATGAGATCTAGAAGAATCTCTTGGTATAAACTCCCAATAGAAACTGAACCTTGTCATTTGGGATaGAAGAAAGGCCCAGGATCA +
Preference number: 4 (lower is better)
Translates to: GSMRSRRISWYKLPIETEPCHLG*KKGPGS
Trigger: TGATCCTGGGCCTTTCTTTCATCCCAAATGACAAGG...TTCAGTTTCTATTGGGAGTTTATACCAAGAGATTCTTCTAGATCTCATTGATCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp AATCTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGCTTCTAAGAGCCTaGAAGGCATTAGAGCTCTTT +
Preference number: 4 (lower is better)
Translates to: NLESLKSDYGRLASLSFCWLLRA*KALELF
Trigger: AAAGAGCTCTAATGCCTTTCAGGCTCTTAGAAGCCA...GCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR TCA 90 bp ACTCCTTTGTACCCCACAATACATACTCTACAAAGAGTAACATTTGACAGAAAAAGAGGTGGCACTTTTTaGGAGACTTGTGATCCTCAG +
Preference number: 4 (lower is better)
Translates to: TPLYPTIHTLQRVTFDRKRGGTF*ETCDPQ
Trigger: CTGAGGATCACAAGTCTCTCAAAAAGTGCCACCTCT...TTTTCTGTCAAATGTTACTCTTTGTAGAGTATGTATTGTGGGGTACAAAGGAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp ATCTTAATTCAGAGAAGGGTTTATGTACAGATCTTGAGTAAATCTGTGTTCCAGAGAGGTGGCACTTTTTaGGAGACTTGTGATCCTCAG +
Preference number: 4 (lower is better)
Translates to: ILIQRRVYVQILSKSVFQRGGTF*ETCDPQ
Trigger: CTGAGGATCACAAGTCTCTCAAAAAGTGCCACCTCT...CTGGAACACAGATTTACTCAAGATCTGTACATAAACCCTTCTCTGAATTAAGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp TTCAACACAAGTACACGAACAAACAGGTCTGAAGTATATCAGGAAAACAAAGTAAGAGGTGGCACTTTTTaGGAGACTTGTGATCCTCAG +
Preference number: 4 (lower is better)
Translates to: FNTSTRTNRSEVYQENKVRGGTF*ETCDPQ
Trigger: CTGAGGATCACAAGTCTCTCAAAAAGTGCCACCTCT...TACTTTGTTTTCCTGATATACTTCAGACCTGTTTGTTCGTGTACTTGTGTTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp ACTCCTTTGTACCCCACAATACATACTCTACAAAGAGTAACATTTGACAGAAAAGAGCACCCTGTTTTCTaGTCACAGAAAGACCAACCA +
Preference number: 4 (lower is better)
Translates to: TPLYPTIHTLQRVTFDRKEHPVF*SQKDQP
Trigger: TGGTTGGTCTTTCTGTGATCAGAAAACAGGGTGCTC...TTTTCTGTCAAATGTTACTCTTTGTAGAGTATGTATTGTGGGGTACAAAGGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp GAGACATTAACCAAATCATCCATATTGGTACATTCAAGTGCCATAAAAAGCAAGGAGCACCCTGTTTTCTaGTCACAGAAAGACCAACCA +
Preference number: 4 (lower is better)
Translates to: ETLTKSSILVHSSAIKSKEHPVF*SQKDQP
Trigger: TGGTTGGTCTTTCTGTGATCAGAAAACAGGGTGCTC...CTTGCTTTTTATGGCACTTGAATGTACCAATATGGATGATTTGGTTAATGTCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp TTAAACTTCAATGCAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACGAACAAACAGGTCTaGAGTATATCAGGAAAACAA +
Preference number: 4 (lower is better)
Translates to: LNFNAEKLALGSPLLLLCTNKQV*SISGKQ
Trigger: TTGTTTTCCTGATATACTTCAGACCTGTTTGTTCGT...ACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTGCATTGAAGTTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp GAAGTCAACATGCAAACAGAGGACACATACTTGTCACAAGTGAACTTGAGGTCAACGAACAAACAGGTCTaGAGTATATCAGGAAAACAA +
Preference number: 4 (lower is better)
Translates to: EVNMQTEDTYLSQVNLRSTNKQV*SISGKQ
Trigger: TTGTTTTCCTGATATACTTCAGACCTGTTTGTTCGT...TGACCTCAAGTTCACTTGTGACAAGTATGTGTCCTCTGTTTGCATGTTGACTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp ATCTTAATTCAGAGAAGGGTTTATGTACAGATCTTGAGTAAATCTGTGTTCCAGAACAGGTTAGGCATGTaGGTTGTCCTGAAGAGAGAG +
Preference number: 4 (lower is better)
Translates to: ILIQRRVYVQILSKSVFQNRLGM*VVLKRE
Trigger: CTCTCTCTTCAGGACAACTCACATGCCTAACCTGTT...CTGGAACACAGATTTACTCAAGATCTGTACATAAACCCTTCTCTGAATTAAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp CAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAGTCTGTGATGGTATCTTTTaGGTCTGCATTGGTCAGCTT +
Preference number: 4 (lower is better)
Translates to: QLRSFYSPCNFCTLLSIVCDGIF*VCIGQL
Trigger: AAGCTGACCAATGCAGACTCAAAAGATACCATCACA...GACTATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000644342.1
ENST00000646800.1
CDS-3UTR TCA 90 bp TTGGATCCTAGCGCAAGAAATTTGCTTTTGGGAATGGTGTCTGTAGATGTCAATCCTGAAGGCACAGTTTaGATACAAATAAACCTCTAC +
Preference number: 4 (lower is better)
Translates to: LDPSARNLLLGMVSVDVNPEGTV*IQINLY
Trigger: GTAGAGGTTTATTTGTATTCAAACTGTGCCTTCAGG...ATTGACATCTACAGACACCATTCCCAAAAGCAAATTTCTTGCGCTAGGATCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642643.1
ENST00000648891.1
CDS-3UTR TCA 90 bp AGTTCTCAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTCCTATAATTGCAGTACACCACTATACCTaGCTAATTTTTGTAGAGATG +
Preference number: 4 (lower is better)
Translates to: SSQRLIIYWWLQIAPIIAVHHYT*LIFVEM
Trigger: CATCTCTACAAAAATTAGTCAGGTATAGTGGTGTAC...TGCAATTATAGGAGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTGAGAACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000645184.1
ENST00000648181.1
CDS-3UTR GCA 90 bp AATCTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTCTTCCTTCTGTTGGTaGTGTGAATTTTCGGCCTCA +
Preference number: 4 (lower is better)
Translates to: NLESLKSDYGRLASLSFCSSFCW*CEFSAS
Trigger: TGAGGCCGAAAATTCACAGCACCAACAGAAGGAAGA...GCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp ATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAGTCAATCTTCCTTCTGTTGGTaGTGTGAATTTTCGGCCTCA +
Preference number: 4 (lower is better)
Translates to: IEKFLFPLQFLYSAIHSQSSFCW*CEFSAS
Trigger: TGAGGCCGAAAATTCACAGCACCAACAGAAGGAAGA...TTGACTATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000646800.1
CDS-3UTR GCA 90 bp CTTCATCCAATACAAGGGCTTGGCCATTCTCCTCTTAATCATTCTTACCCTATTATTATCTCCTTCAGCTaGTGTTTGACAAGATTCCTC +
Preference number: 4 (lower is better)
Translates to: LHPIQGLGHSPLNHSYPIIISFS*CLTRFL
Trigger: GAGGAATCTTGTCAAACAGCAGCTGAAGGAGATAAT...AATAGGGTAAGAATGATTAAGAGGAGAATGGCCAAGCCCTTGTATTGGATGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644342.1
ENST00000646800.1
CDS-3UTR GCA 90 bp GAGACATTAACCAAATCATCCATATTGGTACATTCAAGTGCCATAAAAAGCAAGCTGACTCTACTTCTTTaGCTTCTTCCTCGGACACCT +
Preference number: 4 (lower is better)
Translates to: ETLTKSSILVHSSAIKSKLTLLL*LLPRTP
Trigger: AGGTGTCCGAGGAAGAAGGCAAAGAAGTAGAGTCAG...CTTGCTTTTTATGGCACTTGAATGTACCAATATGGATGATTTGGTTAATGTCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR GCA 90 bp CTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGGCTGTGTTTCTGCACTaGTTAATGAATGAAGATCCA +
Preference number: 4 (lower is better)
Translates to: LESLKSDYGRLASLSFCWAVFLH*LMNEDP
Trigger: TGGATCTTCATTCATTAAGCAGTGCAGAAACACAGC...CCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp AGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAGTCAAGACACCAACAAAGAAACCTTaGAGTGCATGTTCCTGTGTT +
Preference number: 4 (lower is better)
Translates to: RSFYSPCNFCTLLSIVKTPTKKP*SACSCV
Trigger: AACACAGGAACATGCACTGCAAGGTTTCTTTGTTGG...TGTCTTGACTATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000646800.1
CDS-3UTR GCA 90 bp TTGGCAGTGTTACCTTTAGGTAATACAAAGCTGGAATGCCCAATATTTTTCCTCCCAACAAAGAAACCTTaGAGTGCATGTTCCTGTGTT +
Preference number: 4 (lower is better)
Translates to: LAVLPLGNTKLECPIFFLPTKKP*SACSCV
Trigger: AACACAGGAACATGCACTGCAAGGTTTCTTTGTTGG...GAGGAAAAATATTGGGCATTCCAGCTTTGTATTACCTAAAGGTAACACTGCCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644342.1
ENST00000646800.1
CDS-3UTR GCA 90 bp ATTGTCCAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCCCAACAAAGAAACCTTaGAGTGCATGTTCCTGTGTT +
Preference number: 4 (lower is better)
Translates to: IVQLRSFYSPCNFCTLLSPTKKP*SACSCV
Trigger: AACACAGGAACATGCACTGCAAGGTTTCTTTGTTGG...GGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTGGACAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000646800.1
CDS-3UTR GCA 90 bp CAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAGTCCCAACAAAGAAACCTTaGAGTGCATGTTCCTGTGTT +
Preference number: 4 (lower is better)
Translates to: QLRSFYSPCNFCTLLSIVPTKKP*SACSCV
Trigger: AACACAGGAACATGCACTGCAAGGTTTCTTTGTTGG...GACTATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000646800.1
CDS-3UTR GCA 90 bp ACTATCAAGATCAGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACATCCAAAAGATTGAGATaGTCACATACTCGTTTAAGC +
Preference number: 4 (lower is better)
Translates to: TIKIRGHHTAITQLKPRTSKRLR*SHTRLS
Trigger: GCTTAAACGAGTATGTGAGCATCTCAATCTTTTGGA...TGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCTGATCTTGATAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR GCA 90 bp AGTTCTCAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTCCTATAATTGCATCCAAAAGATTGAGATaGTCACATACTCGTTTAAGC +
Preference number: 4 (lower is better)
Translates to: SSQRLIIYWWLQIAPIIASKRLR*SHTRLS
Trigger: GCTTAAACGAGTATGTGAGCATCTCAATCTTTTGGA...TGCAATTATAGGAGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTGAGAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648891.1
CDS-3UTR GCA 90 bp TTAAACTTCAATGCAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTTCCAAAAGATTGAGATaGTCACATACTCGTTTAAGC +
Preference number: 4 (lower is better)
Translates to: LNFNAEKLALGSPLLLLCSKRLR*SHTRLS
Trigger: GCTTAAACGAGTATGTGAGCATCTCAATCTTTTGGA...ACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTGCATTGAAGTTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR GCA 90 bp GAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGTTTGACCTGTATGACTTATaGAGTTCCATGACCTTCTCT +
Preference number: 4 (lower is better)
Translates to: ESLKSDYGRLASLSFCWFDLYDL*SSMTFS
Trigger: AGAGAAGGTCATGGAACTGCATAAGTCATACAGGTC...AAACCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp CAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAGTCGACCTGTATGACTTATaGAGTTCCATGACCTTCTCT +
Preference number: 4 (lower is better)
Translates to: QLRSFYSPCNFCTLLSIVDLYDL*SSMTFS
Trigger: AGAGAAGGTCATGGAACTGCATAAGTCATACAGGTC...GACTATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR GCA 90 bp ATTGTCCAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCGACCTGTATGACTTATaGAGTTCCATGACCTTCTCT +
Preference number: 4 (lower is better)
Translates to: IVQLRSFYSPCNFCTLLSDLYDL*SSMTFS
Trigger: AGAGAAGGTCATGGAACTGCATAAGTCATACAGGTC...GGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTGGACAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR GCA 90 bp CTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGTCCTTCCAAGTCCTTTaGTTTATGAAGATCAACTCC +
Preference number: 4 (lower is better)
Translates to: LESLKSDYGRLASLSFCWSFQVL*FMKINS
Trigger: GGAGTTGATCTTCATAAAGCAAAGGACTTGGAAGGA...CCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp GACATTAACCAAATCATCCATATTGGTACATTCAAGTGCCATAAAAAGCAAGCTATGGTACTTTCATACTaGTCTTGCTCTCCAGGCCGA +
Preference number: 4 (lower is better)
Translates to: DINQIIHIGTFKCHKKQAMVLSY*SCSPGR
Trigger: TCGGCCTGGAGAGCAAGAGCAGTATGAAAGTACCAT...AGCTTGCTTTTTATGGCACTTGAATGTACCAATATGGATGATTTGGTTAATGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR GCA 90 bp TTCAACACAAGTACACGAACAAACAGGTCTGAAGTATATCAGGAAAACAAAGTAATGGTACTTTCATACTaGTCTTGCTCTCCAGGCCGA +
Preference number: 4 (lower is better)
Translates to: FNTSTRTNRSEVYQENKVMVLSY*SCSPGR
Trigger: TCGGCCTGGAGAGCAAGAGCAGTATGAAAGTACCAT...TACTTTGTTTTCCTGATATACTTCAGACCTGTTTGTTCGTGTACTTGTGTTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR GCA 90 bp ATCTTAATTCAGAGAAGGGTTTATGTACAGATCTTGAGTAAATCTGTGTTCCAGATGGTACTTTCATACTaGTCTTGCTCTCCAGGCCGA +
Preference number: 4 (lower is better)
Translates to: ILIQRRVYVQILSKSVFQMVLSY*SCSPGR
Trigger: TCGGCCTGGAGAGCAAGAGCAGTATGAAAGTACCAT...CTGGAACACAGATTTACTCAAGATCTGTACATAAACCCTTCTCTGAATTAAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR GCA 90 bp CAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAGTCTCTCCTGTGGGGATTTaGCCATTGATGTTAAGAGTT +
Preference number: 4 (lower is better)
Translates to: QLRSFYSPCNFCTLLSIVSPVGI*PLMLRV
Trigger: AACTCTTAACATCAATGGGCAAATCCCCACAGGAGA...GACTATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644470.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR GCA 90 bp AGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAGTCAAGACATCTCCTGTGGGGATTTaGCCATTGATGTTAAGAGTT +
Preference number: 4 (lower is better)
Translates to: RSFYSPCNFCTLLSIVKTSPVGI*PLMLRV
Trigger: AACTCTTAACATCAATGGGCAAATCCCCACAGGAGA...TGTCTTGACTATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644470.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR GCA 90 bp ATTGTCCAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCTCTCCTGTGGGGATTTaGCCATTGATGTTAAGAGTT +
Preference number: 4 (lower is better)
Translates to: IVQLRSFYSPCNFCTLLSSPVGI*PLMLRV
Trigger: AACTCTTAACATCAATGGGCAAATCCCCACAGGAGA...GGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTGGACAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644470.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR GCA 90 bp CTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGGCTTTTGGCCCAAAGTaGCTATTTTTCTGTGAGATT +
Preference number: 4 (lower is better)
Translates to: LESLKSDYGRLASLSFCWAFGPK*LFFCEI
Trigger: AATCTCACAGAAAAATAGGCACTTTGGGCCAAAAGC...CCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp GAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGTTTTCGTTTGATGTAAGCTaGATTTCTTGTCACCACTCC +
Preference number: 4 (lower is better)
Translates to: ESLKSDYGRLASLSFCWFSFDVS*ISCHHS
Trigger: GGAGTGGTGACAAGAAATGCAGCTTACATCAAACGA...AAACCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR GCA 90 bp AATCTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTATAAATACAGGTCTTaGTTTGTGGGTGGGTGCCAG +
Preference number: 4 (lower is better)
Translates to: NLESLKSDYGRLASLSFCYKYRS*FVGGCQ
Trigger: CTGGCACCCACCCACAAAGCAAGACCTGTATTTATA...GCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR GCA 90 bp TTAAACTTCAATGCAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTGGAAGATTACCAACCTaGCATATGCTTAATTCTGAT +
Preference number: 4 (lower is better)
Translates to: LNFNAEKLALGSPLLLLCGRLPT*HMLNSD
Trigger: ATCAGAATTAAGCATATGGCAGGTTGGTAATCTTCC...ACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTGCATTGAAGTTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR GCA 90 bp AAAGTAGAGGTGGCACTTTTTGAGAGACTTGTGATCCTCAGGGATTGGAATAGAGGAAGATTACCAACCTaGCATATGCTTAATTCTGAT +
Preference number: 4 (lower is better)
Translates to: KVEVALFERLVILRDWNRGRLPT*HMLNSD
Trigger: ATCAGAATTAAGCATATGGCAGGTTGGTAATCTTCC...TCTATTCCAATCCCTGAGGATCACAAGTCTCTCAAAAAGTGCCACCTCTACTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR GCA 90 bp ATTGTCCAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCTCAACACTGGTTCTTTaGACACCCCTAAGTGATATG +
Preference number: 4 (lower is better)
Translates to: IVQLRSFYSPCNFCTLLSSTLVL*TPLSDM
Trigger: CATATCACTTAGGGGTGTGCAAAGAACCAGTGTTGA...GGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTGGACAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644470.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR GCA 90 bp AGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAGTCAAGACATCAACACTGGTTCTTTaGACACCCCTAAGTGATATG +
Preference number: 4 (lower is better)
Translates to: RSFYSPCNFCTLLSIVKTSTLVL*TPLSDM
Trigger: CATATCACTTAGGGGTGTGCAAAGAACCAGTGTTGA...TGTCTTGACTATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644470.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR GCA 90 bp ATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAGTCAAGCACGTTCCTGTGTCTaGTTTCACAGTAGAAGATCA +
Preference number: 4 (lower is better)
Translates to: IEKFLFPLQFLYSAIHSQARSCV*FHSRRS
Trigger: TGATCTTCTACTGTGAAAGCAGACACAGGAACGTGC...TTGACTATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR CCA 90 bp CTCTTTCCCTCCCTCCTGTTGTTCATGTCTCACATGGGTACCAAAAGAAAAATGTCTCTTCATCAAGACTaGTTCCAAATTCTATCTCTT +
Preference number: 4 (lower is better)
Translates to: LFPSLLLFMSHMGTKRKMSLHQD*FQILSL
Trigger: AAGAGATAGAATTTGGAACCAGTCTTGATGAAGAGA...CATTTTTCTTTTGGTACCCATGTGAGACATGAACAACAGGAGGGAGGGAAAGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp AGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAGAAGTTCAATGGTCTCTTCATCAAGACTaGTTCCAAATTCTATCTCTT +
Preference number: 4 (lower is better)
Translates to: RGHHTAITQLKPRTEVQWSLHQD*FQILSL
Trigger: AAGAGATAGAATTTGGAACCAGTCTTGATGAAGAGA...CCATTGAACTTCTGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CCA 90 bp TTCCCTCCATTTTCACAATTGGTCATGTGGACAAAGTACTCACTCCTTCTCCTGTCTCTTCATCAAGACTaGTTCCAAATTCTATCTCTT +
Preference number: 4 (lower is better)
Translates to: FPPFSQLVMWTKYSLLLLSLHQD*FQILSL
Trigger: AAGAGATAGAATTTGGAACCAGTCTTGATGAAGAGA...CAGGAGAAGGAGTGAGTACTTTGTCCACATGACCAATTGTGAAAATGGAGGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642643.1
ENST00000648891.1
CDS-3UTR CCA 90 bp GAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGTTTATGAAGATCCAAAGATaGGTCTGTTTTGAGTTCCGG +
Preference number: 4 (lower is better)
Translates to: ESLKSDYGRLASLSFCWFMKIQR*VCFEFR
Trigger: CCGGAACTCAAAACAGACCCATCTTTGGATCTTCAT...AAACCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp ATTACTTTGGTGCTGCCAATCACTAATTGGGCAATGCCAATAATGAAGCATTCTATGAAGATCCAAAGATaGGTCTGTTTTGAGTTCCGG +
Preference number: 4 (lower is better)
Translates to: ITLVLPITNWAMPIMKHSMKIQR*VCFEFR
Trigger: CCGGAACTCAAAACAGACCCATCTTTGGATCTTCAT...AGAATGCTTCATTATTGGCATTGCCCAATTAGTGATTGGCAGCACCAAAGTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000646800.1
CDS-3UTR CCA 90 bp GTCCAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAATGAAGATCCAAAGATaGGTCTGTTTTGAGTTCCGG +
Preference number: 4 (lower is better)
Translates to: VQLRSFYSPCNFCTLLSIMKIQR*VCFEFR
Trigger: CCGGAACTCAAAACAGACCCATCTTTGGATCTTCAT...TATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTGGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000646800.1
CDS-3UTR CCA 90 bp CAGATATCTGAAGCAACTTCCATGTCTTTGACCCAAAGAAGCTCCAAAAAGAAAATGAAGATCCAAAGATaGGTCTGTTTTGAGTTCCGG +
Preference number: 4 (lower is better)
Translates to: QISEATSMSLTQRSSKKKMKIQR*VCFEFR
Trigger: CCGGAACTCAAAACAGACCCATCTTTGGATCTTCAT...TTTCTTTTTGGAGCTTCTTTGGGTCAAAGACATGGAAGTTGCTTCAGATATCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp TTAAACTTCAATGCAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTTTGCGTTATCCCAAATaGCTAGACCAAAATAGTCTT +
Preference number: 4 (lower is better)
Translates to: LNFNAEKLALGSPLLLLCLRYPK*LDQNSL
Trigger: AAGACTATTTTGGTCTAGCCATTTGGGATAACGCAA...ACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTGCATTGAAGTTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CCA 90 bp TTAAACTTCAATGCAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTCTGTGCTGGGTCAGGTaGATAAAACTTTACATTAAA +
Preference number: 4 (lower is better)
Translates to: LNFNAEKLALGSPLLLLCLCWVR*IKLYIK
Trigger: TTTAATGTAAAGTTTTATCCACCTGACCCAGCACAG...ACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTGCATTGAAGTTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CCA 90 bp AGAAGTCAACATGCAAACAGAGGACACATACTTGTCACAAGTGAACTTGAGGTCCTGTGCTGGGTCAGGTaGATAAAACTTTACATTAAA +
Preference number: 4 (lower is better)
Translates to: RSQHANRGHILVTSELEVLCWVR*IKLYIK
Trigger: TTTAATGTAAAGTTTTATCCACCTGACCCAGCACAG...GACCTCAAGTTCACTTGTGACAAGTATGTGTCCTCTGTTTGCATGTTGACTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CCA 90 bp AGTTCTCAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTCCTATAATTGCACTGTGCTGGGTCAGGTaGATAAAACTTTACATTAAA +
Preference number: 4 (lower is better)
Translates to: SSQRLIIYWWLQIAPIIALCWVR*IKLYIK
Trigger: TTTAATGTAAAGTTTTATCCACCTGACCCAGCACAG...TGCAATTATAGGAGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTGAGAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648181.1
ENST00000648891.1
CDS-3UTR CCA 90 bp CTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGCCAGTTCAGACTGGATaGTGTAAGAACCTAATAATG +
Preference number: 4 (lower is better)
Translates to: LESLKSDYGRLASLSFCWPVQTG*CKNLIM
Trigger: CATTATTAGGTTCTTACACCATCCAGTCTGAACTGG...CCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp GGATCAATGAGATCTAGAAGAATCTCTTGGTATAAACTCCCAATAGAAACTGAACCTGAGCTGGAGTCATaGACCTGTATGACTTATGCA +
Preference number: 4 (lower is better)
Translates to: GSMRSRRISWYKLPIETEPELES*TCMTYA
Trigger: TGCATAAGTCATACAGGTCCATGACTCCAGCTCAGG...TTCAGTTTCTATTGGGAGTTTATACCAAGAGATTCTTCTAGATCTCATTGATCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp ACTCCTTTGTACCCCACAATACATACTCTACAAAGAGTAACATTTGACAGAAAACCTGAGCTGGAGTCATaGACCTGTATGACTTATGCA +
Preference number: 4 (lower is better)
Translates to: TPLYPTIHTLQRVTFDRKPELES*TCMTYA
Trigger: TGCATAAGTCATACAGGTCCATGACTCCAGCTCAGG...TTTTCTGTCAAATGTTACTCTTTGTAGAGTATGTATTGTGGGGTACAAAGGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CCA 90 bp GACATTAACCAAATCATCCATATTGGTACATTCAAGTGCCATAAAAAGCAAGCTCCTGAGCTGGAGTCATaGACCTGTATGACTTATGCA +
Preference number: 4 (lower is better)
Translates to: DINQIIHIGTFKCHKKQAPELES*TCMTYA
Trigger: TGCATAAGTCATACAGGTCCATGACTCCAGCTCAGG...AGCTTGCTTTTTATGGCACTTGAATGTACCAATATGGATGATTTGGTTAATGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CCA 90 bp ATCTTAATTCAGAGAAGGGTTTATGTACAGATCTTGAGTAAATCTGTGTTCCAGCCTGAGCTGGAGTCATaGACCTGTATGACTTATGCA +
Preference number: 4 (lower is better)
Translates to: ILIQRRVYVQILSKSVFQPELES*TCMTYA
Trigger: TGCATAAGTCATACAGGTCCATGACTCCAGCTCAGG...CTGGAACACAGATTTACTCAAGATCTGTACATAAACCCTTCTCTGAATTAAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CCA 90 bp AGTTCTCAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTCCTATAATTGCACACTGTATCGAAATTTaGATCCTAGCGCAAGAAATT +
Preference number: 4 (lower is better)
Translates to: SSQRLIIYWWLQIAPIIAHCIEI*ILAQEI
Trigger: AATTTCTTGCGCTAGGATCCAAATTTCGATACAGTG...TGCAATTATAGGAGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTGAGAACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648181.1
ENST00000648891.1
CDS-3UTR CCA 90 bp GACATTAACCAAATCATCCATATTGGTACATTCAAGTGCCATAAAAAGCAAGCTGCAAGCTTCTGTGTTTaGTCACCATTTGAGGTGGGT +
Preference number: 4 (lower is better)
Translates to: DINQIIHIGTFKCHKKQAASFCV*SPFEVG
Trigger: ACCCACCTCAAATGGTGACCAAACACAGAAGCTTGC...AGCTTGCTTTTTATGGCACTTGAATGTACCAATATGGATGATTTGGTTAATGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644600.1
ENST00000644780.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CCA 90 bp ACTCCTTTGTACCCCACAATACATACTCTACAAAGAGTAACATTTGACAGAAAAGCAAGCTTCTGTGTTTaGTCACCATTTGAGGTGGGT +
Preference number: 4 (lower is better)
Translates to: TPLYPTIHTLQRVTFDRKASFCV*SPFEVG
Trigger: ACCCACCTCAAATGGTGACCAAACACAGAAGCTTGC...TTTTCTGTCAAATGTTACTCTTTGTAGAGTATGTATTGTGGGGTACAAAGGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644600.1
ENST00000644780.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CCA 90 bp GGATCAATGAGATCTAGAAGAATCTCTTGGTATAAACTCCCAATAGAAACTGAAACTAGGCCGTGGTTCTaGTACAGACTCCATGAAGTT +
Preference number: 4 (lower is better)
Translates to: GSMRSRRISWYKLPIETETRPWF*YRLHEV
Trigger: AACTTCATGGAGTCTGTACCAGAACCACGGCCTAGT...TTCAGTTTCTATTGGGAGTTTATACCAAGAGATTCTTCTAGATCTCATTGATCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
CDS-3UTR CCA 90 bp ATATTGGCAGTGTTACCTTTAGGTAATACAAAGCTGGAATGCCCAATATTTTTCACTAGGCCGTGGTTCTaGTACAGACTCCATGAAGTT +
Preference number: 4 (lower is better)
Translates to: ILAVLPLGNTKLECPIFFTRPWF*YRLHEV
Trigger: AACTTCATGGAGTCTGTACCAGAACCACGGCCTAGT...GAAAAATATTGGGCATTCCAGCTTTGTATTACCTAAAGGTAACACTGCCAATAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644342.1
ENST00000646800.1
CDS-3UTR CCA 90 bp AATCTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCGGAAGGGTGAGTGAGTaGATAAGCGTTTATCCCATT +
Preference number: 4 (lower is better)
Translates to: NLESLKSDYGRLASLSFCGRVSE*ISVYPI
Trigger: AATGGGATAAACGCTTATCCACTCACTCACCCTTCC...GCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
CDS-3UTR CCA 90 bp AATCTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCAGGGACGTCTTTGGTTaGGATTTCACTTTTCACAGC +
Preference number: 4 (lower is better)
Translates to: NLESLKSDYGRLASLSFCRDVFG*DFTFHS
Trigger: GCTGTGAAAAGTGAAATCCCAACCAAAGACGTCCCT...GCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp TCCATTAGAGCTTTTGGCCCAAAGTGCCTATTTTTCTGTGAGATTTGGTCTCCTTGTTCATGTCTCACATaGGTACCAAAAGAAAAATGC +
Preference number: 4 (lower is better)
Translates to: SIRAFGPKCLFFCEIWSPCSCLT*VPKEKC
Trigger: GCATTTTTCTTTTGGTACCCATGTGAGACATGAACA...AGGAGACCAAATCTCACAGAAAAATAGGCACTTTGGGCCAAAAGCTCTAATGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp AGTTCTCAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTCCTATAATTGCACTCCATTTTCACAATTaGTCATGTGGACAAAGTACT +
Preference number: 4 (lower is better)
Translates to: SSQRLIIYWWLQIAPIIALHFHN*SCGQST
Trigger: AGTACTTTGTCCACATGACCAATTGTGAAAATGGAG...TGCAATTATAGGAGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTGAGAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648181.1
ENST00000648891.1
CDS-3UTR CCA 90 bp GTCCAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATATCTTCATTTTCTTGCTaGGGCAAGGCTCTTTCAGTA +
Preference number: 4 (lower is better)
Translates to: VQLRSFYSPCNFCTLLSISSFSC*GKALSV
Trigger: TACTGAAAGAGCCTTGCCCCAGCAAGAAAATGAAGA...TATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTGGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR CCA 90 bp CTTCATCCAATACAAGGGCTTGGCCATTCTCCTCTTAATCATTCTTACCCTATTCTTTTGAGTCTGCATTaGTCAGCTTCATCCAATACA +
Preference number: 4 (lower is better)
Translates to: LHPIQGLGHSPLNHSYPILLSLH*SASSNT
Trigger: TGTATTGGATGAAGCTGACCAATGCAGACTCAAAAG...AATAGGGTAAGAATGATTAAGAGGAGAATGGCCAAGCCCTTGTATTGGATGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636666.1
ENST00000644342.1
ENST00000646800.1
CDS-3UTR CCA 90 bp ATTGTCCAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCAGTTCAAGGAATCACTaGCTTTCCCCTTGCTATGTT +
Preference number: 4 (lower is better)
Translates to: IVQLRSFYSPCNFCTLLSSSRNH*LSPCYV
Trigger: AACATAGCAAGGGGAAAGCCAGTGATTCCTTGAACT...GGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTGGACAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR CCA 90 bp TCTATACACCAGGCAGGAAAAAGTTGTCTGTCCCTGTACAGCTCAGAAATACTCTTTGGCAATTTATCCTaGCAAAGTTTCTGTAACACA +
Preference number: 4 (lower is better)
Translates to: SIHQAGKSCLSLYSSEILFGNLS*QSFCNT
Trigger: TGTGTTACAGAAACTTTGCCAGGATAAATTGCCAAA...GAGTATTTCTGAGCTGTACAGGGACAGACAACTTTTTCCTGCCTGGTGTATAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR CCA 90 bp AGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAGAAGTTCAATGGGATGTGCAAAGGATTTaGAAGTATCTTTTAGACACT +
Preference number: 4 (lower is better)
Translates to: RGHHTAITQLKPRTEVQWDVQRI*KYLLDT
Trigger: AGTGTCTAAAAGATACTTCCAAATCCTTTGCACATC...CCATTGAACTTCTGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR CCA 90 bp AAAGTAGAGGTGGCACTTTTTGAGAGACTTGTGATCCTCAGGGATTGGAATAGACTCAAAAATGATACTTaGGGATGTGCAAAGGATTTG +
Preference number: 4 (lower is better)
Translates to: KVEVALFERLVILRDWNRLKNDT*GCAKDL
Trigger: CAAATCCTTTGCACATCCCCAAGTATCATTTTTGAG...TCTATTCCAATCCCTGAGGATCACAAGTCTCTCAAAAAGTGCCACCTCTACTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR CCA 90 bp TTAAACTTCAATGCAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTCTCAAAAATGATACTTaGGGATGTGCAAAGGATTTG +
Preference number: 4 (lower is better)
Translates to: LNFNAEKLALGSPLLLLCLKNDT*GCAKDL
Trigger: CAAATCCTTTGCACATCCCCAAGTATCATTTTTGAG...ACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTGCATTGAAGTTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
3UTR CAA 72 bp TTAAATTTGTTAAACTTCAATGCAGAAAAGCTGGCTTaGGGCAGTCCATTGCTACTCCTTTGTACCCCACAA +
Preference number: 4 (lower is better)
Translates to: LNLLNFNAEKLA*GSPLLLLCTPQ
Trigger: TTGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTGCATTGAAGTTTAACAAATTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp GGATCAATGAGATCTAGAAGAATCTCTTGGTATAAACTCCCAATAGAAACTGAAGAGATTTGGGCCTTTTaGGAAACGAGGAGAATAGTC +
Preference number: 4 (lower is better)
Translates to: GSMRSRRISWYKLPIETEEIWAF*ETRRIV
Trigger: GACTATTCTCCTCGTTTCTCAAAAGGCCCAAATCTC...TTCAGTTTCTATTGGGAGTTTATACCAAGAGATTCTTCTAGATCTCATTGATCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp GAGACATTAACCAAATCATCCATATTGGTACATTCAAGTGCCATAAAAAGCAAGGAGATTTGGGCCTTTTaGGAAACGAGGAGAATAGTC +
Preference number: 4 (lower is better)
Translates to: ETLTKSSILVHSSAIKSKEIWAF*ETRRIV
Trigger: GACTATTCTCCTCGTTTCTCAAAAGGCCCAAATCTC...CTTGCTTTTTATGGCACTTGAATGTACCAATATGGATGATTTGGTTAATGTCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp GACATTAACCAAATCATCCATATTGGTACATTCAAGTGCCATAAAAAGCAAGCTGAGATTTGGGCCTTTTaGGAAACGAGGAGAATAGTC +
Preference number: 4 (lower is better)
Translates to: DINQIIHIGTFKCHKKQAEIWAF*ETRRIV
Trigger: GACTATTCTCCTCGTTTCTCAAAAGGCCCAAATCTC...AGCTTGCTTTTTATGGCACTTGAATGTACCAATATGGATGATTTGGTTAATGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp AATCTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCGCACTGCTTAATGAATaGAGATCCAAAGATGGGTCT +
Preference number: 4 (lower is better)
Translates to: NLESLKSDYGRLASLSFCALLNE*RSKDGS
Trigger: AGACCCATCTTTGGATCTTCATTCATTAAGCAGTGC...GCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp GAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGTTTCTTCTTCCAAAAGATTaGGATGCTCACATACTCGTT +
Preference number: 4 (lower is better)
Translates to: ESLKSDYGRLASLSFCWFLLPKD*DAHILV
Trigger: AACGAGTATGTGAGCATCTCAATCTTTTGGAAGAAG...AAACCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000343067.9
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp AGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAGTCAAGACACTTCTTCCAAAAGATTaGGATGCTCACATACTCGTT +
Preference number: 4 (lower is better)
Translates to: RSFYSPCNFCTLLSIVKTLLPKD*DAHILV
Trigger: AACGAGTATGTGAGCATCTCAATCTTTTGGAAGAAG...TGTCTTGACTATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000646800.1
CDS-3UTR TCA 90 bp GTCCAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATACTTCTTCCAAAAGATTaGGATGCTCACATACTCGTT +
Preference number: 4 (lower is better)
Translates to: VQLRSFYSPCNFCTLLSILLPKD*DAHILV
Trigger: AACGAGTATGTGAGCATCTCAATCTTTTGGAAGAAG...TATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTGGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000646800.1
CDS-3UTR TCA 90 bp GGATCAATGAGATCTAGAAGAATCTCTTGGTATAAACTCCCAATAGAAACTGAATCAAGTTCCTTGGTCTaGTTCGGGGCCAGTTTAAAA +
Preference number: 4 (lower is better)
Translates to: GSMRSRRISWYKLPIETESSSLV*FGASLK
Trigger: TTTTAAACTGGCCCCGAATCAGACCAAGGAACTTGA...TTCAGTTTCTATTGGGAGTTTATACCAAGAGATTCTTCTAGATCTCATTGATCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp TTCAACACAAGTACACGAACAAACAGGTCTGAAGTATATCAGGAAAACAAAGTATCAAGTTCCTTGGTCTaGTTCGGGGCCAGTTTAAAA +
Preference number: 4 (lower is better)
Translates to: FNTSTRTNRSEVYQENKVSSSLV*FGASLK
Trigger: TTTTAAACTGGCCCCGAATCAGACCAAGGAACTTGA...TACTTTGTTTTCCTGATATACTTCAGACCTGTTTGTTCGTGTACTTGTGTTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp AATCTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCACTTATGCAGTTCCATaGCCTTCTCTTCAAGTTCCT +
Preference number: 4 (lower is better)
Translates to: NLESLKSDYGRLASLSFCTYAVP*PSLQVP
Trigger: AGGAACTTGAAGAGAAGGTCATGGAACTGCATAAGT...GCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp GGATCAATGAGATCTAGAAGAATCTCTTGGTATAAACTCCCAATAGAAACTGAAAGTCATGGACCTGTATaGCTTATGCAGTTCCATGAC +
Preference number: 4 (lower is better)
Translates to: GSMRSRRISWYKLPIETESHGPV*LMQFHD
Trigger: GTCATGGAACTGCATAAGTCATACAGGTCCATGACT...TTCAGTTTCTATTGGGAGTTTATACCAAGAGATTCTTCTAGATCTCATTGATCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp TTCAACACAAGTACACGAACAAACAGGTCTGAAGTATATCAGGAAAACAAAGTAAGTCATGGACCTGTATaGCTTATGCAGTTCCATGAC +
Preference number: 4 (lower is better)
Translates to: FNTSTRTNRSEVYQENKVSHGPV*LMQFHD
Trigger: GTCATGGAACTGCATAAGTCATACAGGTCCATGACT...TACTTTGTTTTCCTGATATACTTCAGACCTGTTTGTTCGTGTACTTGTGTTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp GGATCAATGAGATCTAGAAGAATCTCTTGGTATAAACTCCCAATAGAAACTGAAAGCAGACACCTAGGATaGTATCTACTCCTTCCAAGT +
Preference number: 4 (lower is better)
Translates to: GSMRSRRISWYKLPIETESRHLG*YLLLPS
Trigger: ACTTGGAAGGAGTAGATATCATCCTAGGTGTCTGCT...TTCAGTTTCTATTGGGAGTTTATACCAAGAGATTCTTCTAGATCTCATTGATCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp GAGACATTAACCAAATCATCCATATTGGTACATTCAAGTGCCATAAAAAGCAAGAGCAGACACCTAGGATaGTATCTACTCCTTCCAAGT +
Preference number: 4 (lower is better)
Translates to: ETLTKSSILVHSSAIKSKSRHLG*YLLLPS
Trigger: ACTTGGAAGGAGTAGATATCATCCTAGGTGTCTGCT...CTTGCTTTTTATGGCACTTGAATGTACCAATATGGATGATTTGGTTAATGTCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp AATTGTCCAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCGGTAACTGGGAAGTTTaGATCCGATGGTACTTTCAT +
Preference number: 4 (lower is better)
Translates to: NCPIEKFLFPLQFLYSAIGNWEV*IRWYFH
Trigger: ATGAAAGTACCATCGGATTCAAACTTCCCAGTTACC...GATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTGGACAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR TCA 90 bp AATCTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCGGTAACTGGGAAGTTTaGATCCGATGGTACTTTCAT +
Preference number: 4 (lower is better)
Translates to: NLESLKSDYGRLASLSFCGNWEV*IRWYFH
Trigger: ATGAAAGTACCATCGGATTCAAACTTCCCAGTTACC...GCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp CTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGAATCTGAAAAACGTGTaGTGTTCTACACAGACTTTC +
Preference number: 4 (lower is better)
Translates to: LESLKSDYGRLASLSFCWNLKNV*CSTQTF
Trigger: GAAAGTCTGTGTAGAACATCACACGTTTTTCAGATT...CCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp GAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGTTTTTTTTGATCTCCTCTTaGCTCTTGTCTAAATCCTCC +
Preference number: 4 (lower is better)
Translates to: ESLKSDYGRLASLSFCWFFLISS*LLSKSS
Trigger: GGAGGATTTAGACAAGAGTCAAGAGGAGATCAAAAA...AAACCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTC
39% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
CDS-3UTR TCA 90 bp CAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAGTCTTTTTGATCTCCTCTTaGCTCTTGTCTAAATCCTCC +
Preference number: 4 (lower is better)
Translates to: QLRSFYSPCNFCTLLSIVFLISS*LLSKSS
Trigger: GGAGGATTTAGACAAGAGTCAAGAGGAGATCAAAAA...GACTATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000643604.1
ENST00000644470.1
ENST00000644600.1
ENST00000646800.1
CDS-3UTR TCA 90 bp GGACACATACTTGTCACAAGTGAACTTGAGGTCACAAAGCCATTGATTAAAAACTTTTTGATCTCCTCTTaGCTCTTGTCTAAATCCTCC +
Preference number: 4 (lower is better)
Translates to: GHILVTSELEVTKPLIKNFLISS*LLSKSS
Trigger: GGAGGATTTAGACAAGAGTCAAGAGGAGATCAAAAA...GTTTTTAATCAATGGCTTTGTGACCTCAAGTTCACTTGTGACAAGTATGTGTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000643604.1
ENST00000644600.1
ENST00000644780.1
ENST00000646800.1
CDS-3UTR TCA 90 bp GAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGTTTTCTTTTTCAGCTCACTaGTGCTGGCATGATGTTTTT +
Preference number: 4 (lower is better)
Translates to: ESLKSDYGRLASLSFCWFSFSAH*CWHDVF
Trigger: AAAAACATCATGCCAGCATCAGTGAGCTGAAAAAGA...AAACCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
CDS-3UTR TCA 90 bp GTCCAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATATCTTTTTCAGCTCACTaGTGCTGGCATGATGTTTTT +
Preference number: 4 (lower is better)
Translates to: VQLRSFYSPCNFCTLLSISFSAH*CWHDVF
Trigger: AAAAACATCATGCCAGCATCAGTGAGCTGAAAAAGA...TATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTGGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644470.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR TCA 90 bp GGACACATACTTGTCACAAGTGAACTTGAGGTCACAAAGCCATTGATTAAAAACTCTTTTTCAGCTCACTaGTGCTGGCATGATGTTTTT +
Preference number: 4 (lower is better)
Translates to: GHILVTSELEVTKPLIKNSFSAH*CWHDVF
Trigger: AAAAACATCATGCCAGCATCAGTGAGCTGAAAAAGA...GTTTTTAATCAATGGCTTTGTGACCTCAAGTTCACTTGTGACAAGTATGTGTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp AGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAGTCAAGACATCTTTTTCAGCTCACTaGTGCTGGCATGATGTTTTT +
Preference number: 4 (lower is better)
Translates to: RSFYSPCNFCTLLSIVKTSFSAH*CWHDVF
Trigger: AAAAACATCATGCCAGCATCAGTGAGCTGAAAAAGA...TGTCTTGACTATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644470.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR TCA 90 bp CAGATATCTGAAGCAACTTCCATGTCTTTGACCCAAAGAAGCTCCAAAAAGAAATCTTTTTCAGCTCACTaGTGCTGGCATGATGTTTTT +
Preference number: 4 (lower is better)
Translates to: QISEATSMSLTQRSSKKKSFSAH*CWHDVF
Trigger: AAAAACATCATGCCAGCATCAGTGAGCTGAAAAAGA...TTTCTTTTTGGAGCTTCTTTGGGTCAAAGACATGGAAGTTGCTTCAGATATCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR TCA 90 bp ATCTTAATTCAGAGAAGGGTTTATGTACAGATCTTGAGTAAATCTGTGTTCCAGCTGGTACAGACTCCATaGAGTTCTTTTTCAGCTCAC +
Preference number: 4 (lower is better)
Translates to: ILIQRRVYVQILSKSVFQLVQTP*SSFSAH
Trigger: GTGAGCTGAAAAAGAACTTCATGGAGTCTGTACCAG...CTGGAACACAGATTTACTCAAGATCTGTACATAAACCCTTCTCTGAATTAAGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp ACTCCTTTGTACCCCACAATACATACTCTACAAAGAGTAACATTTGACAGAAAACTGGTACAGACTCCATaGAGTTCTTTTTCAGCTCAC +
Preference number: 4 (lower is better)
Translates to: TPLYPTIHTLQRVTFDRKLVQTP*SSFSAH
Trigger: GTGAGCTGAAAAAGAACTTCATGGAGTCTGTACCAG...TTTTCTGTCAAATGTTACTCTTTGTAGAGTATGTATTGTGGGGTACAAAGGAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp AATCTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCAGCATTGGCATTATCTaGGATGGTGACAGTTTGTGT +
Preference number: 4 (lower is better)
Translates to: NLESLKSDYGRLASLSFCSIGII*DGDSLC
Trigger: ACACAAACTGTCACCATCTCAGATAATGCCAATGCT...GCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp GGATCAATGAGATCTAGAAGAATCTCTTGGTATAAACTCCCAATAGAAACTGAATCAGATGTGATAGTTTaGGCTGTCAGCAAGACTCCT +
Preference number: 4 (lower is better)
Translates to: GSMRSRRISWYKLPIETESDVIV*AVSKTP
Trigger: AGGAGTCTTGCTGACAGCTCAAACTATCACATCTGA...TTCAGTTTCTATTGGGAGTTTATACCAAGAGATTCTTCTAGATCTCATTGATCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp GGATCAATGAGATCTAGAAGAATCTCTTGGTATAAACTCCCAATAGAAACTGAAACAGTCTTGGTAATTTaGGTTGTGGTGGTGCTGCTT +
Preference number: 4 (lower is better)
Translates to: GSMRSRRISWYKLPIETETVLVI*VVVVLL
Trigger: AAGCAGCACCACCACAACTCAAATTACCAAGACTGT...TTCAGTTTCTATTGGGAGTTTATACCAAGAGATTCTTCTAGATCTCATTGATCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp GAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGTTTTTCAATACGTGTCTCTaGAATCCCACCTTTTACAGT +
Preference number: 4 (lower is better)
Translates to: ESLKSDYGRLASLSFCWFFNTCL*NPTFYS
Trigger: ACTGTAAAAGGTGGGATTTCAGAGACACGTATTGAA...AAACCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp GGATCAATGAGATCTAGAAGAATCTCTTGGTATAAACTCCCAATAGAAACTGAAGCTTGTACAAGGACCTaGTCATGGTCAATATCAGCA +
Preference number: 4 (lower is better)
Translates to: GSMRSRRISWYKLPIETEACTRT*SWSISA
Trigger: TGCTGATATTGACCATGATCAGGTCCTTGTACAAGC...TTCAGTTTCTATTGGGAGTTTATACCAAGAGATTCTTCTAGATCTCATTGATCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp CAGATATCTGAAGCAACTTCCATGTCTTTGACCCAAAGAAGCTCCAAAAAGAAAATAATCTTGAAAGTCTaGAGTCTGACTATGGCAGGT +
Preference number: 4 (lower is better)
Translates to: QISEATSMSLTQRSSKKKIILKV*SLTMAG
Trigger: ACCTGCCATAGTCAGACTTCAGACTTTCAAGATTAT...TTTCTTTTTGGAGCTTCTTTGGGTCAAAGACATGGAAGTTGCTTCAGATATCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp GAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGTTTATAATCTTGAAAGTCTaGAGTCTGACTATGGCAGGT +
Preference number: 4 (lower is better)
Translates to: ESLKSDYGRLASLSFCWFIILKV*SLTMAG
Trigger: ACCTGCCATAGTCAGACTTCAGACTTTCAAGATTAT...AAACCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp AATCTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCACCAGCCTAACAAGGTaGAATCCCGTTTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: NLESLKSDYGRLASLSFCTSLTR*NPVSTK
Trigger: TTTAGTAGAAACGGGATTTCACCTTGTTAGGCTGGT...GCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp GGATCAATGAGATCTAGAAGAATCTCTTGGTATAAACTCCCAATAGAAACTGAATCTCTGAGTTCTTCCTaGGCAGGACTTTTAACGATG +
Preference number: 4 (lower is better)
Translates to: GSMRSRRISWYKLPIETESLSSS*AGLLTM
Trigger: CATCGTTAAAAGTCCTGCTCAGGAAGAACTCAGAGA...TTCAGTTTCTATTGGGAGTTTATACCAAGAGATTCTTCTAGATCTCATTGATCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373800.7
ENST00000643155.1
CDS-3UTR TCA 90 bp GTCCAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATATTTTTGAGAGACTTGTaGTCCTCAGGGATTGGAATA +
Preference number: 4 (lower is better)
Translates to: VQLRSFYSPCNFCTLLSIFLRDL*SSGIGI
Trigger: TATTCCAATCCCTGAGGATCACAAGTCTCTCAAAAA...TATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTGGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR TCA 90 bp ATTACTTTGGTGCTGCCAATCACTAATTGGGCAATGCCAATAATGAAGCATTCTTTTTTGAGAGACTTGTaGTCCTCAGGGATTGGAATA +
Preference number: 4 (lower is better)
Translates to: ITLVLPITNWAMPIMKHSFLRDL*SSGIGI
Trigger: TATTCCAATCCCTGAGGATCACAAGTCTCTCAAAAA...AGAATGCTTCATTATTGGCATTGCCCAATTAGTGATTGGCAGCACCAAAGTAAT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR TCA 90 bp AGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAGTCAAGACATTTTTGAGAGACTTGTaGTCCTCAGGGATTGGAATA +
Preference number: 4 (lower is better)
Translates to: RSFYSPCNFCTLLSIVKTFLRDL*SSGIGI
Trigger: TATTCCAATCCCTGAGGATCACAAGTCTCTCAAAAA...TGTCTTGACTATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR TCA 90 bp CAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAGTCTTTTTGAGAGACTTGTaGTCCTCAGGGATTGGAATA +
Preference number: 4 (lower is better)
Translates to: QLRSFYSPCNFCTLLSIVFLRDL*SSGIGI
Trigger: TATTCCAATCCCTGAGGATCACAAGTCTCTCAAAAA...GACTATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR TCA 90 bp ATCTTAATTCAGAGAAGGGTTTATGTACAGATCTTGAGTAAATCTGTGTTCCAGATAGGTAGAGTAGTCTaGGAATTTCAGTCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: ILIQRRVYVQILSKSVFQIGRVV*EFQSWL
Trigger: CAGCCAGGACTGAAATTCTCAGACTACTCTACCTAT...CTGGAACACAGATTTACTCAAGATCTGTACATAAACCCTTCTCTGAATTAAGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR GCA 90 bp GGATCAATGAGATCTAGAAGAATCTCTTGGTATAAACTCCCAATAGAAACTGAATCTTCCTTCTGTTGGTaGTGTGAATTTTCGGCCTCA +
Preference number: 4 (lower is better)
Translates to: GSMRSRRISWYKLPIETESSFCW*CEFSAS
Trigger: TGAGGCCGAAAATTCACAGCACCAACAGAAGGAAGA...TTCAGTTTCTATTGGGAGTTTATACCAAGAGATTCTTCTAGATCTCATTGATCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp TTCAACACAAGTACACGAACAAACAGGTCTGAAGTATATCAGGAAAACAAAGTATCTTCCTTCTGTTGGTaGTGTGAATTTTCGGCCTCA +
Preference number: 4 (lower is better)
Translates to: FNTSTRTNRSEVYQENKVSSFCW*CEFSAS
Trigger: TGAGGCCGAAAATTCACAGCACCAACAGAAGGAAGA...TACTTTGTTTTCCTGATATACTTCAGACCTGTTTGTTCGTGTACTTGTGTTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR GCA 90 bp GGACACATACTTGTCACAAGTGAACTTGAGGTCACAAAGCCATTGATTAAAAACATTATCTCCTTCAGCTaGTGTTTGACAAGATTCCTC +
Preference number: 4 (lower is better)
Translates to: GHILVTSELEVTKPLIKNIISFS*CLTRFL
Trigger: GAGGAATCTTGTCAAACAGCAGCTGAAGGAGATAAT...GTTTTTAATCAATGGCTTTGTGACCTCAAGTTCACTTGTGACAAGTATGTGTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR GCA 90 bp CAGATATCTGAAGCAACTTCCATGTCTTTGACCCAAAGAAGCTCCAAAAAGAAAGCTGTGTTTCTGCACTaGTTAATGAATGAAGATCCA +
Preference number: 4 (lower is better)
Translates to: QISEATSMSLTQRSSKKKAVFLH*LMNEDP
Trigger: TGGATCTTCATTCATTAAGCAGTGCAGAAACACAGC...TTTCTTTTTGGAGCTTCTTTGGGTCAAAGACATGGAAGTTGCTTCAGATATCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp AGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAGTCAAGACAGCTGTGTTTCTGCACTaGTTAATGAATGAAGATCCA +
Preference number: 4 (lower is better)
Translates to: RSFYSPCNFCTLLSIVKTAVFLH*LMNEDP
Trigger: TGGATCTTCATTCATTAAGCAGTGCAGAAACACAGC...TGTCTTGACTATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000646800.1
CDS-3UTR GCA 90 bp GGACACATACTTGTCACAAGTGAACTTGAGGTCACAAAGCCATTGATTAAAAACGCTGTGTTTCTGCACTaGTTAATGAATGAAGATCCA +
Preference number: 4 (lower is better)
Translates to: GHILVTSELEVTKPLIKNAVFLH*LMNEDP
Trigger: TGGATCTTCATTCATTAAGCAGTGCAGAAACACAGC...GTTTTTAATCAATGGCTTTGTGACCTCAAGTTCACTTGTGACAAGTATGTGTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR GCA 90 bp GGACACATACTTGTCACAAGTGAACTTGAGGTCACAAAGCCATTGATTAAAAACTCCTTCCAAGTCCTTTaGTTTATGAAGATCAACTCC +
Preference number: 4 (lower is better)
Translates to: GHILVTSELEVTKPLIKNSFQVL*FMKINS
Trigger: GGAGTTGATCTTCATAAAGCAAAGGACTTGGAAGGA...GTTTTTAATCAATGGCTTTGTGACCTCAAGTTCACTTGTGACAAGTATGTGTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR GCA 90 bp ATTACTTTGGTGCTGCCAATCACTAATTGGGCAATGCCAATAATGAAGCATTCTTCCTTCCAAGTCCTTTaGTTTATGAAGATCAACTCC +
Preference number: 4 (lower is better)
Translates to: ITLVLPITNWAMPIMKHSSFQVL*FMKINS
Trigger: GGAGTTGATCTTCATAAAGCAAAGGACTTGGAAGGA...AGAATGCTTCATTATTGGCATTGCCCAATTAGTGATTGGCAGCACCAAAGTAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR GCA 90 bp ATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAGTCAACTAGCGCAAGAAATTTaGTTTTGGGAATGGTGTCTG +
Preference number: 4 (lower is better)
Translates to: IEKFLFPLQFLYSAIHSQLAQEI*FWEWCL
Trigger: CAGACACCATTCCCAAAAGCAAATTTCTTGCGCTAG...TTGACTATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR GCA 90 bp AATCTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTCTCCTGTGGGGATTTaGCCATTGATGTTAAGAGTT +
Preference number: 4 (lower is better)
Translates to: NLESLKSDYGRLASLSFCSPVGI*PLMLRV
Trigger: AACTCTTAACATCAATGGGCAAATCCCCACAGGAGA...GCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
CDS-3UTR GCA 90 bp AATTGTCCAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCTCTCCTGTGGGGATTTaGCCATTGATGTTAAGAGTT +
Preference number: 4 (lower is better)
Translates to: NCPIEKFLFPLQFLYSAISPVGI*PLMLRV
Trigger: AACTCTTAACATCAATGGGCAAATCCCCACAGGAGA...GATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTGGACAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644470.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR GCA 90 bp GAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGTTTGCTTTTGGCCCAAAGTaGCTATTTTTCTGTGAGATT +
Preference number: 4 (lower is better)
Translates to: ESLKSDYGRLASLSFCWFAFGPK*LFFCEI
Trigger: AATCTCACAGAAAAATAGGCACTTTGGGCCAAAAGC...AAACCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp GGATCAATGAGATCTAGAAGAATCTCTTGGTATAAACTCCCAATAGAAACTGAAACCTTTCAGACCCTCTaGCCACAGCCTATAATTTTG +
Preference number: 4 (lower is better)
Translates to: GSMRSRRISWYKLPIETETFQTL*PQPIIL
Trigger: CAAAATTATAGGCTGTGGGCAGAGGGTCTGAAAGGT...TTCAGTTTCTATTGGGAGTTTATACCAAGAGATTCTTCTAGATCTCATTGATCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp GGACACATACTTGTCACAAGTGAACTTGAGGTCACAAAGCCATTGATTAAAAACATTTCTTCATTTTCTTaGTGGGGCAAGGCTCTTTCA +
Preference number: 4 (lower is better)
Translates to: GHILVTSELEVTKPLIKNISSFS*WGKALS
Trigger: TGAAAGAGCCTTGCCCCAGCAAGAAAATGAAGAAAT...GTTTTTAATCAATGGCTTTGTGACCTCAAGTTCACTTGTGACAAGTATGTGTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR GCA 90 bp TTGGCAGTGTTACCTTTAGGTAATACAAAGCTGGAATGCCCAATATTTTTCCTCATTTCTTCATTTTCTTaGTGGGGCAAGGCTCTTTCA +
Preference number: 4 (lower is better)
Translates to: LAVLPLGNTKLECPIFFLISSFS*WGKALS
Trigger: TGAAAGAGCCTTGCCCCAGCAAGAAAATGAAGAAAT...GAGGAAAAATATTGGGCATTCCAGCTTTGTATTACCTAAAGGTAACACTGCCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000636666.1
ENST00000644342.1
ENST00000646800.1
CDS-3UTR GCA 90 bp AGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAGTCAAGACAATTTCTTCATTTTCTTaGTGGGGCAAGGCTCTTTCA +
Preference number: 4 (lower is better)
Translates to: RSFYSPCNFCTLLSIVKTISSFS*WGKALS
Trigger: TGAAAGAGCCTTGCCCCAGCAAGAAAATGAAGAAAT...TGTCTTGACTATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR GCA 90 bp CAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAGTCATTTCTTCATTTTCTTaGTGGGGCAAGGCTCTTTCA +
Preference number: 4 (lower is better)
Translates to: QLRSFYSPCNFCTLLSIVISSFS*WGKALS
Trigger: TGAAAGAGCCTTGCCCCAGCAAGAAAATGAAGAAAT...GACTATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR GCA 90 bp AATTGTCCAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCTCAACACTGGTTCTTTaGACACCCCTAAGTGATATG +
Preference number: 4 (lower is better)
Translates to: NCPIEKFLFPLQFLYSAISTLVL*TPLSDM
Trigger: CATATCACTTAGGGGTGTGCAAAGAACCAGTGTTGA...GATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTGGACAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644470.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR GCA 90 bp ATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAGTCAATCAACACTGGTTCTTTaGACACCCCTAAGTGATATG +
Preference number: 4 (lower is better)
Translates to: IEKFLFPLQFLYSAIHSQSTLVL*TPLSDM
Trigger: CATATCACTTAGGGGTGTGCAAAGAACCAGTGTTGA...TTGACTATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644470.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR GCA 90 bp CTTCATCCAATACAAGGGCTTGGCCATTCTCCTCTTAATCATTCTTACCCTATTAGTTTTTATTCCCCCTaGAATTTCTGTACTCTGCTA +
Preference number: 4 (lower is better)
Translates to: LHPIQGLGHSPLNHSYPISFYSP*NFCTLL
Trigger: TAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACT...AATAGGGTAAGAATGATTAAGAGGAGAATGGCCAAGCCCTTGTATTGGATGAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000644342.1
ENST00000646800.1
CDS-3UTR GCA 90 bp ACTATCAAGATCAGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACATGTAACACAATAGGGTaGTCAATAGATACCTTTTTG +
Preference number: 4 (lower is better)
Translates to: TIKIRGHHTAITQLKPRTCNTIG*SIDTFL
Trigger: CAAAAAGGTATCTATTGAGCACCCTATTGTGTTACA...TGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCTGATCTTGATAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR GCA 90 bp ATCTTAATTCAGAGAAGGGTTTATGTACAGATCTTGAGTAAATCTGTGTTCCAGGCACGTTCCTGTGTCTaGTTTCACAGTAGAAGATCA +
Preference number: 4 (lower is better)
Translates to: ILIQRRVYVQILSKSVFQARSCV*FHSRRS
Trigger: TGATCTTCTACTGTGAAAGCAGACACAGGAACGTGC...CTGGAACACAGATTTACTCAAGATCTGTACATAAACCCTTCTCTGAATTAAGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR CCA 90 bp ACTATCAAGATCAGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACATCTCTTCATCAAGACTaGTTCCAAATTCTATCTCTT +
Preference number: 4 (lower is better)
Translates to: TIKIRGHHTAITQLKPRTSLHQD*FQILSL
Trigger: AAGAGATAGAATTTGGAACCAGTCTTGATGAAGAGA...TGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCTGATCTTGATAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CCA 90 bp AATCTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCATGAAGATCCAAAGATaGGTCTGTTTTGAGTTCCGG +
Preference number: 4 (lower is better)
Translates to: NLESLKSDYGRLASLSFCMKIQR*VCFEFR
Trigger: CCGGAACTCAAAACAGACCCATCTTTGGATCTTCAT...GCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp AATTGTCCAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCATGAAGATCCAAAGATaGGTCTGTTTTGAGTTCCGG +
Preference number: 4 (lower is better)
Translates to: NCPIEKFLFPLQFLYSAIMKIQR*VCFEFR
Trigger: CCGGAACTCAAAACAGACCCATCTTTGGATCTTCAT...GATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTGGACAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000646800.1
CDS-3UTR CCA 90 bp TTAAACTTCAATGCAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTCTTTTACTTCTATTTTaGAGCACTCTTCAAGTCCTT +
Preference number: 4 (lower is better)
Translates to: LNFNAEKLALGSPLLLLCLLLLF*STLQVL
Trigger: AAGGACTTGAAGAGTGCTCCAAAATAGAAGTAAAAG...ACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTGCATTGAAGTTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CCA 90 bp AGTTCTCAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTCCTATAATTGCACTTTTACTTCTATTTTaGAGCACTCTTCAAGTCCTT +
Preference number: 4 (lower is better)
Translates to: SSQRLIIYWWLQIAPIIALLLLF*STLQVL
Trigger: AAGGACTTGAAGAGTGCTCCAAAATAGAAGTAAAAG...TGCAATTATAGGAGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTGAGAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648891.1
CDS-3UTR CCA 90 bp AGAAGTCAACATGCAAACAGAGGACACATACTTGTCACAAGTGAACTTGAGGTCCTTTTACTTCTATTTTaGAGCACTCTTCAAGTCCTT +
Preference number: 4 (lower is better)
Translates to: RSQHANRGHILVTSELEVLLLLF*STLQVL
Trigger: AAGGACTTGAAGAGTGCTCCAAAATAGAAGTAAAAG...GACCTCAAGTTCACTTGTGACAAGTATGTGTCCTCTGTTTGCATGTTGACTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CCA 90 bp GAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGTTTCCAGTTCAGACTGGATaGTGTAAGAACCTAATAATG +
Preference number: 4 (lower is better)
Translates to: ESLKSDYGRLASLSFCWFPVQTG*CKNLIM
Trigger: CATTATTAGGTTCTTACACCATCCAGTCTGAACTGG...AAACCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp CAGATATCTGAAGCAACTTCCATGTCTTTGACCCAAAGAAGCTCCAAAAAGAAACCAGTTCAGACTGGATaGTGTAAGAACCTAATAATG +
Preference number: 4 (lower is better)
Translates to: QISEATSMSLTQRSSKKKPVQTG*CKNLIM
Trigger: CATTATTAGGTTCTTACACCATCCAGTCTGAACTGG...TTTCTTTTTGGAGCTTCTTTGGGTCAAAGACATGGAAGTTGCTTCAGATATCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp CTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGCACTGTATCGAAATTTaGATCCTAGCGCAAGAAATT +
Preference number: 4 (lower is better)
Translates to: LESLKSDYGRLASLSFCWHCIEI*ILAQEI
Trigger: AATTTCTTGCGCTAGGATCCAAATTTCGATACAGTG...CCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp CACTGTATCGAAATTTGGATCCTAGCGCAAGAAATTTGCTTTTGGGAATGGTGTCACTGTATCGAAATTTaGATCCTAGCGCAAGAAATT +
Preference number: 4 (lower is better)
Translates to: HCIEIWILAQEICFWEWCHCIEI*ILAQEI
Trigger: AATTTCTTGCGCTAGGATCCAAATTTCGATACAGTG...ACACCATTCCCAAAAGCAAATTTCTTGCGCTAGGATCCAAATTTCGATACAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
CDS-3UTR CCA 90 bp GAGACATTAACCAAATCATCCATATTGGTACATTCAAGTGCCATAAAAAGCAAGGGAAGGGTGAGTGAGTaGATAAGCGTTTATCCCATT +
Preference number: 4 (lower is better)
Translates to: ETLTKSSILVHSSAIKSKGRVSE*ISVYPI
Trigger: AATGGGATAAACGCTTATCCACTCACTCACCCTTCC...CTTGCTTTTTATGGCACTTGAATGTACCAATATGGATGATTTGGTTAATGTCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CCA 90 bp GACATTAACCAAATCATCCATATTGGTACATTCAAGTGCCATAAAAAGCAAGCTGGAAGGGTGAGTGAGTaGATAAGCGTTTATCCCATT +
Preference number: 4 (lower is better)
Translates to: DINQIIHIGTFKCHKKQAGRVSE*ISVYPI
Trigger: AATGGGATAAACGCTTATCCACTCACTCACCCTTCC...AGCTTGCTTTTTATGGCACTTGAATGTACCAATATGGATGATTTGGTTAATGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CCA 90 bp TTCAACACAAGTACACGAACAAACAGGTCTGAAGTATATCAGGAAAACAAAGTAGGAAGGGTGAGTGAGTaGATAAGCGTTTATCCCATT +
Preference number: 4 (lower is better)
Translates to: FNTSTRTNRSEVYQENKVGRVSE*ISVYPI
Trigger: AATGGGATAAACGCTTATCCACTCACTCACCCTTCC...TACTTTGTTTTCCTGATATACTTCAGACCTGTTTGTTCGTGTACTTGTGTTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CCA 90 bp AATCTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCACATTCCTTGTCATTTaGGATGAAAGAAAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: NLESLKSDYGRLASLSFCTFLVI*DERKAQ
Trigger: CTGGGCCTTTCTTTCATCCCAAATGACAAGGAATGT...GCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp GAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGTTTTCTATTTTAGGAAGCTaGAACTGGGATTCTAAGGAG +
Preference number: 4 (lower is better)
Translates to: ESLKSDYGRLASLSFCWFSILGS*NWDSKE
Trigger: CTCCTTAGAATCCCAGTTCCAGCTTCCTAAAATAGA...AAACCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp ATCTTAATTCAGAGAAGGGTTTATGTACAGATCTTGAGTAAATCTGTGTTCCAGGTGATCCTCAGGGATTaGAATAGAAACCTTGGGAAG +
Preference number: 4 (lower is better)
Translates to: ILIQRRVYVQILSKSVFQVILRD*NRNLGK
Trigger: CTTCCCAAGGTTTCTATTCCAATCCCTGAGGATCAC...CTGGAACACAGATTTACTCAAGATCTGTACATAAACCCTTCTCTGAATTAAGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CCA 90 bp GAGACATTAACCAAATCATCCATATTGGTACATTCAAGTGCCATAAAAAGCAAGGTGATCCTCAGGGATTaGAATAGAAACCTTGGGAAG +
Preference number: 4 (lower is better)
Translates to: ETLTKSSILVHSSAIKSKVILRD*NRNLGK
Trigger: CTTCCCAAGGTTTCTATTCCAATCCCTGAGGATCAC...CTTGCTTTTTATGGCACTTGAATGTACCAATATGGATGATTTGGTTAATGTCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CCA 90 bp ATTGTCCAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCCTGCCAATCACTAATTaGGCAATGCCAATAATGAAG +
Preference number: 4 (lower is better)
Translates to: IVQLRSFYSPCNFCTLLSLPITN*AMPIMK
Trigger: CTTCATTATTGGCATTGCCCAATTAGTGATTGGCAG...GGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTGGACAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR CCA 90 bp AGAAGTCAACATGCAAACAGAGGACACATACTTGTCACAAGTGAACTTGAGGTCTTTGGCAATTTATCCTaGCAAAGTTTCTGTAACACA +
Preference number: 4 (lower is better)
Translates to: RSQHANRGHILVTSELEVFGNLS*QSFCNT
Trigger: TGTGTTACAGAAACTTTGCCAGGATAAATTGCCAAA...GACCTCAAGTTCACTTGTGACAAGTATGTGTCCTCTGTTTGCATGTTGACTTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR CCA 90 bp TTAGGGGCCTCCTTGGTTTACTATATAATTGTGGGGAACCAGTCCAGATATTTCACCTCTACTGGCTTATaGTCAGTTTATAAACATACA +
Preference number: 4 (lower is better)
Translates to: LGASLVYYIIVGNQSRYFTSTGL*SVYKHT
Trigger: TGTATGTTTATAAACTGACCATAAGCCAGTAGAGGT...GAAATATCTGGACTGGTTCCCCACAATTATATAGTAAACCAAGGAGGCCCCTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000645184.1
ENST00000648181.1
3UTR CAA 72 bp TTTGAAGATCTCTTCTATACACCAGGCAGGAAAAAGTaGTCTGTCCCTGTACAGCTCAGAAATACTCATAAA +
Preference number: 4 (lower is better)
Translates to: FEDLFYTPGRKK*SVPVQLRNTHK
Trigger: TTTATGAGTATTTCTGAGCTGTACAGGGACAGACAACTTTTTCCTGCCTGGTGTATAGAAGAGATCTTCAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp GGATCAATGAGATCTAGAAGAATCTCTTGGTATAAACTCCCAATAGAAACTGAAGCACTGCTTAATGAATaGAGATCCAAAGATGGGTCT +
Preference number: 4 (lower is better)
Translates to: GSMRSRRISWYKLPIETEALLNE*RSKDGS
Trigger: AGACCCATCTTTGGATCTTCATTCATTAAGCAGTGC...TTCAGTTTCTATTGGGAGTTTATACCAAGAGATTCTTCTAGATCTCATTGATCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp GAGACATTAACCAAATCATCCATATTGGTACATTCAAGTGCCATAAAAAGCAAGGCACTGCTTAATGAATaGAGATCCAAAGATGGGTCT +
Preference number: 4 (lower is better)
Translates to: ETLTKSSILVHSSAIKSKALLNE*RSKDGS
Trigger: AGACCCATCTTTGGATCTTCATTCATTAAGCAGTGC...CTTGCTTTTTATGGCACTTGAATGTACCAATATGGATGATTTGGTTAATGTCTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp GGATCAATGAGATCTAGAAGAATCTCTTGGTATAAACTCCCAATAGAAACTGAAACTTATGCAGTTCCATaGCCTTCTCTTCAAGTTCCT +
Preference number: 4 (lower is better)
Translates to: GSMRSRRISWYKLPIETETYAVP*PSLQVP
Trigger: AGGAACTTGAAGAGAAGGTCATGGAACTGCATAAGT...TTCAGTTTCTATTGGGAGTTTATACCAAGAGATTCTTCTAGATCTCATTGATCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp ACTCCTTTGTACCCCACAATACATACTCTACAAAGAGTAACATTTGACAGAAAAACTTATGCAGTTCCATaGCCTTCTCTTCAAGTTCCT +
Preference number: 4 (lower is better)
Translates to: TPLYPTIHTLQRVTFDRKTYAVP*PSLQVP
Trigger: AGGAACTTGAAGAGAAGGTCATGGAACTGCATAAGT...TTTTCTGTCAAATGTTACTCTTTGTAGAGTATGTATTGTGGGGTACAAAGGAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp TTCAACACAAGTACACGAACAAACAGGTCTGAAGTATATCAGGAAAACAAAGTAACTTATGCAGTTCCATaGCCTTCTCTTCAAGTTCCT +
Preference number: 4 (lower is better)
Translates to: FNTSTRTNRSEVYQENKVTYAVP*PSLQVP
Trigger: AGGAACTTGAAGAGAAGGTCATGGAACTGCATAAGT...TACTTTGTTTTCCTGATATACTTCAGACCTGTTTGTTCGTGTACTTGTGTTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp GACATTAACCAAATCATCCATATTGGTACATTCAAGTGCCATAAAAAGCAAGCTACTTATGCAGTTCCATaGCCTTCTCTTCAAGTTCCT +
Preference number: 4 (lower is better)
Translates to: DINQIIHIGTFKCHKKQATYAVP*PSLQVP
Trigger: AGGAACTTGAAGAGAAGGTCATGGAACTGCATAAGT...AGCTTGCTTTTTATGGCACTTGAATGTACCAATATGGATGATTTGGTTAATGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp CAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAGTCAATCTGAAAAACGTGTaGTGTTCTACACAGACTTTC +
Preference number: 4 (lower is better)
Translates to: QLRSFYSPCNFCTLLSIVNLKNV*CSTQTF
Trigger: GAAAGTCTGTGTAGAACATCACACGTTTTTCAGATT...GACTATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR TCA 90 bp GTCCAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAAATCTGAAAAACGTGTaGTGTTCTACACAGACTTTC +
Preference number: 4 (lower is better)
Translates to: VQLRSFYSPCNFCTLLSINLKNV*CSTQTF
Trigger: GAAAGTCTGTGTAGAACATCACACGTTTTTCAGATT...TATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTGGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR TCA 90 bp GGACACATACTTGTCACAAGTGAACTTGAGGTCACAAAGCCATTGATTAAAAACAATCTGAAAAACGTGTaGTGTTCTACACAGACTTTC +
Preference number: 4 (lower is better)
Translates to: GHILVTSELEVTKPLIKNNLKNV*CSTQTF
Trigger: GAAAGTCTGTGTAGAACATCACACGTTTTTCAGATT...GTTTTTAATCAATGGCTTTGTGACCTCAAGTTCACTTGTGACAAGTATGTGTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp ATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAGTCAATTTTTGATCTCCTCTTaGCTCTTGTCTAAATCCTCC +
Preference number: 4 (lower is better)
Translates to: IEKFLFPLQFLYSAIHSQFLISS*LLSKSS
Trigger: GGAGGATTTAGACAAGAGTCAAGAGGAGATCAAAAA...TTGACTATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000643604.1
ENST00000644470.1
ENST00000644600.1
ENST00000646800.1
CDS-3UTR TCA 90 bp AATCTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTCTTTTTCAGCTCACTaGTGCTGGCATGATGTTTTT +
Preference number: 4 (lower is better)
Translates to: NLESLKSDYGRLASLSFCSFSAH*CWHDVF
Trigger: AAAAACATCATGCCAGCATCAGTGAGCTGAAAAAGA...GCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAGATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
CDS-3UTR TCA 90 bp GGATCAATGAGATCTAGAAGAATCTCTTGGTATAAACTCCCAATAGAAACTGAAAGCATTGGCATTATCTaGGATGGTGACAGTTTGTGT +
Preference number: 4 (lower is better)
Translates to: GSMRSRRISWYKLPIETESIGII*DGDSLC
Trigger: ACACAAACTGTCACCATCTCAGATAATGCCAATGCT...TTCAGTTTCTATTGGGAGTTTATACCAAGAGATTCTTCTAGATCTCATTGATCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp AATCTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTTCAATACGTGTCTCTaGAATCCCACCTTTTACAGT +
Preference number: 4 (lower is better)
Translates to: NLESLKSDYGRLASLSFCFNTCL*NPTFYS
Trigger: ACTGTAAAAGGTGGGATTTCAGAGACACGTATTGAA...GCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp GAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGTTTTATCAGCATCTCCTGTaGTCACAATTCTCTTTTCAA +
Preference number: 4 (lower is better)
Translates to: ESLKSDYGRLASLSFCWFYQHLL*SQFSFQ
Trigger: TTGAAAAGAGAATTGTGATCACAGGAGATGCTGATA...AAACCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp AATCTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCATAATCTTGAAAGTCTaGAGTCTGACTATGGCAGGT +
Preference number: 4 (lower is better)
Translates to: NLESLKSDYGRLASLSFCIILKV*SLTMAG
Trigger: ACCTGCCATAGTCAGACTTCAGACTTTCAAGATTAT...GCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp CAGATATCTGAAGCAACTTCCATGTCTTTGACCCAAAGAAGCTCCAAAAAGAAAACAGTATCAGATATCTaGAGCAACTTCCATGTCTTT +
Preference number: 4 (lower is better)
Translates to: QISEATSMSLTQRSSKKKTVSDI*SNFHVF
Trigger: AAAGACATGGAAGTTGCTTCAGATATCTGATACTGT...TTTCTTTTTGGAGCTTCTTTGGGTCAAAGACATGGAAGTTGCTTCAGATATCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp GAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGTTTACAGTATCAGATATCTaGAGCAACTTCCATGTCTTT +
Preference number: 4 (lower is better)
Translates to: ESLKSDYGRLASLSFCWFTVSDI*SNFHVF
Trigger: AAAGACATGGAAGTTGCTTCAGATATCTGATACTGT...AAACCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp AATCTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCCACTACATGTTCGTTTaGTGTAAGCTGCATTTCTTG +
Preference number: 4 (lower is better)
Translates to: NLESLKSDYGRLASLSFCHYMFV*CKLHFL
Trigger: CAAGAAATGCAGCTTACATCAAACGAACATGTAGTG...GCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR TCA 90 bp GAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGTTTTTTTTGATCTCCTCTTaGCTCTTGTCTAAATCCTTC +
Preference number: 4 (lower is better)
Translates to: ESLKSDYGRLASLSFCWFFLISS*LLSKSF
Trigger: GAAGGATTTAGACAAGAGTCAAGAGGAGATCAAAAA...AAACCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTC
38% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000347529.7
ENST00000647103.1
CDS-3UTR TCA 90 bp CAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAGTCACGAACAAACAGGTCTaGAGTATATCAGGAAAACAA +
Preference number: 4 (lower is better)
Translates to: QLRSFYSPCNFCTLLSIVTNKQV*SISGKQ
Trigger: TTGTTTTCCTGATATACTTCAGACCTGTTTGTTCGT...GACTATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR TCA 90 bp ATTACTTTGGTGCTGCCAATCACTAATTGGGCAATGCCAATAATGAAGCATTCTAGATACCTTTTTGAGTaGGTGAACATTAGAACGGAA +
Preference number: 4 (lower is better)
Translates to: ITLVLPITNWAMPIMKHSRYLFE*VNIRTE
Trigger: TTCCGTTCTAATGTTCACTCACTCAAAAAGGTATCT...AGAATGCTTCATTATTGGCATTGCCCAATTAGTGATTGGCAGCACCAAAGTAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR TCA 90 bp AGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAGTCAAGACAAGATACCTTTTTGAGTaGGTGAACATTAGAACGGAA +
Preference number: 4 (lower is better)
Translates to: RSFYSPCNFCTLLSIVKTRYLFE*VNIRTE
Trigger: TTCCGTTCTAATGTTCACTCACTCAAAAAGGTATCT...TGTCTTGACTATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR GCA 90 bp AATCTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCATTATCTCCTTCAGCTaGTGTTTGACAAGATTCCTC +
Preference number: 4 (lower is better)
Translates to: NLESLKSDYGRLASLSFCIISFS*CLTRFL
Trigger: GAGGAATCTTGTCAAACAGCAGCTGAAGGAGATAAT...GCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp AATCTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCGCTGTGTTTCTGCACTaGTTAATGAATGAAGATCCA +
Preference number: 4 (lower is better)
Translates to: NLESLKSDYGRLASLSFCAVFLH*LMNEDP
Trigger: TGGATCTTCATTCATTAAGCAGTGCAGAAACACAGC...GCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp GGATCAATGAGATCTAGAAGAATCTCTTGGTATAAACTCCCAATAGAAACTGAACCAACAAAGAAACCTTaGAGTGCATGTTCCTGTGTT +
Preference number: 4 (lower is better)
Translates to: GSMRSRRISWYKLPIETEPTKKP*SACSCV
Trigger: AACACAGGAACATGCACTGCAAGGTTTCTTTGTTGG...TTCAGTTTCTATTGGGAGTTTATACCAAGAGATTCTTCTAGATCTCATTGATCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp GAGACATTAACCAAATCATCCATATTGGTACATTCAAGTGCCATAAAAAGCAAGCCAACAAAGAAACCTTaGAGTGCATGTTCCTGTGTT +
Preference number: 4 (lower is better)
Translates to: ETLTKSSILVHSSAIKSKPTKKP*SACSCV
Trigger: AACACAGGAACATGCACTGCAAGGTTTCTTTGTTGG...CTTGCTTTTTATGGCACTTGAATGTACCAATATGGATGATTTGGTTAATGTCTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR GCA 90 bp TTCAACACAAGTACACGAACAAACAGGTCTGAAGTATATCAGGAAAACAAAGTACCAACAAAGAAACCTTaGAGTGCATGTTCCTGTGTT +
Preference number: 4 (lower is better)
Translates to: FNTSTRTNRSEVYQENKVPTKKP*SACSCV
Trigger: AACACAGGAACATGCACTGCAAGGTTTCTTTGTTGG...TACTTTGTTTTCCTGATATACTTCAGACCTGTTTGTTCGTGTACTTGTGTTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR GCA 90 bp GAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGTTTTCCAAAAGATTGAGATaGTCACATACTCGTTTAAGC +
Preference number: 4 (lower is better)
Translates to: ESLKSDYGRLASLSFCWFSKRLR*SHTRLS
Trigger: GCTTAAACGAGTATGTGAGCATCTCAATCTTTTGGA...AAACCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000343067.9
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp GTCCAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATATCCAAAAGATTGAGATaGTCACATACTCGTTTAAGC +
Preference number: 4 (lower is better)
Translates to: VQLRSFYSPCNFCTLLSISKRLR*SHTRLS
Trigger: GCTTAAACGAGTATGTGAGCATCTCAATCTTTTGGA...TATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTGGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000646800.1
CDS-3UTR GCA 90 bp GGATCAATGAGATCTAGAAGAATCTCTTGGTATAAACTCCCAATAGAAACTGAAGACCTGTATGACTTATaGAGTTCCATGACCTTCTCT +
Preference number: 4 (lower is better)
Translates to: GSMRSRRISWYKLPIETEDLYDL*SSMTFS
Trigger: AGAGAAGGTCATGGAACTGCATAAGTCATACAGGTC...TTCAGTTTCTATTGGGAGTTTATACCAAGAGATTCTTCTAGATCTCATTGATCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp ACTCCTTTGTACCCCACAATACATACTCTACAAAGAGTAACATTTGACAGAAAAGACCTGTATGACTTATaGAGTTCCATGACCTTCTCT +
Preference number: 4 (lower is better)
Translates to: TPLYPTIHTLQRVTFDRKDLYDL*SSMTFS
Trigger: AGAGAAGGTCATGGAACTGCATAAGTCATACAGGTC...TTTTCTGTCAAATGTTACTCTTTGTAGAGTATGTATTGTGGGGTACAAAGGAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR GCA 90 bp GACATTAACCAAATCATCCATATTGGTACATTCAAGTGCCATAAAAAGCAAGCTGACCTGTATGACTTATaGAGTTCCATGACCTTCTCT +
Preference number: 4 (lower is better)
Translates to: DINQIIHIGTFKCHKKQADLYDL*SSMTFS
Trigger: AGAGAAGGTCATGGAACTGCATAAGTCATACAGGTC...AGCTTGCTTTTTATGGCACTTGAATGTACCAATATGGATGATTTGGTTAATGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR GCA 90 bp AATCTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTCCTTCCAAGTCCTTTaGTTTATGAAGATCAACTCC +
Preference number: 4 (lower is better)
Translates to: NLESLKSDYGRLASLSFCSFQVL*FMKINS
Trigger: GGAGTTGATCTTCATAAAGCAAAGGACTTGGAAGGA...GCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp ATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAGTCAATCCTTCCAAGTCCTTTaGTTTATGAAGATCAACTCC +
Preference number: 4 (lower is better)
Translates to: IEKFLFPLQFLYSAIHSQSFQVL*FMKINS
Trigger: GGAGTTGATCTTCATAAAGCAAAGGACTTGGAAGGA...TTGACTATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR GCA 90 bp GAGACATTAACCAAATCATCCATATTGGTACATTCAAGTGCCATAAAAAGCAAGCTAGCGCAAGAAATTTaGTTTTGGGAATGGTGTCTG +
Preference number: 4 (lower is better)
Translates to: ETLTKSSILVHSSAIKSKLAQEI*FWEWCL
Trigger: CAGACACCATTCCCAAAAGCAAATTTCTTGCGCTAG...CTTGCTTTTTATGGCACTTGAATGTACCAATATGGATGATTTGGTTAATGTCTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR GCA 90 bp ATCTTAATTCAGAGAAGGGTTTATGTACAGATCTTGAGTAAATCTGTGTTCCAGCTAGCGCAAGAAATTTaGTTTTGGGAATGGTGTCTG +
Preference number: 4 (lower is better)
Translates to: ILIQRRVYVQILSKSVFQLAQEI*FWEWCL
Trigger: CAGACACCATTCCCAAAAGCAAATTTCTTGCGCTAG...CTGGAACACAGATTTACTCAAGATCTGTACATAAACCCTTCTCTGAATTAAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR GCA 90 bp GGATCAATGAGATCTAGAAGAATCTCTTGGTATAAACTCCCAATAGAAACTGAATCTCCTGTGGGGATTTaGCCATTGATGTTAAGAGTT +
Preference number: 4 (lower is better)
Translates to: GSMRSRRISWYKLPIETESPVGI*PLMLRV
Trigger: AACTCTTAACATCAATGGGCAAATCCCCACAGGAGA...TTCAGTTTCTATTGGGAGTTTATACCAAGAGATTCTTCTAGATCTCATTGATCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
CDS-3UTR GCA 90 bp GACATTAACCAAATCATCCATATTGGTACATTCAAGTGCCATAAAAAGCAAGCTTCTCCTGTGGGGATTTaGCCATTGATGTTAAGAGTT +
Preference number: 4 (lower is better)
Translates to: DINQIIHIGTFKCHKKQASPVGI*PLMLRV
Trigger: AACTCTTAACATCAATGGGCAAATCCCCACAGGAGA...AGCTTGCTTTTTATGGCACTTGAATGTACCAATATGGATGATTTGGTTAATGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR GCA 90 bp ACTCCTTTGTACCCCACAATACATACTCTACAAAGAGTAACATTTGACAGAAAATCTCCTGTGGGGATTTaGCCATTGATGTTAAGAGTT +
Preference number: 4 (lower is better)
Translates to: TPLYPTIHTLQRVTFDRKSPVGI*PLMLRV
Trigger: AACTCTTAACATCAATGGGCAAATCCCCACAGGAGA...TTTTCTGTCAAATGTTACTCTTTGTAGAGTATGTATTGTGGGGTACAAAGGAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR GCA 90 bp TTCAACACAAGTACACGAACAAACAGGTCTGAAGTATATCAGGAAAACAAAGTATCTCCTGTGGGGATTTaGCCATTGATGTTAAGAGTT +
Preference number: 4 (lower is better)
Translates to: FNTSTRTNRSEVYQENKVSPVGI*PLMLRV
Trigger: AACTCTTAACATCAATGGGCAAATCCCCACAGGAGA...TACTTTGTTTTCCTGATATACTTCAGACCTGTTTGTTCGTGTACTTGTGTTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR GCA 90 bp GGATCAATGAGATCTAGAAGAATCTCTTGGTATAAACTCCCAATAGAAACTGAATCGTTTGATGTAAGCTaGATTTCTTGTCACCACTCC +
Preference number: 4 (lower is better)
Translates to: GSMRSRRISWYKLPIETESFDVS*ISCHHS
Trigger: GGAGTGGTGACAAGAAATGCAGCTTACATCAAACGA...TTCAGTTTCTATTGGGAGTTTATACCAAGAGATTCTTCTAGATCTCATTGATCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR GCA 90 bp GTCCAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAGGAAGATTACCAACCTaGCATATGCTTAATTCTGAT +
Preference number: 4 (lower is better)
Translates to: VQLRSFYSPCNFCTLLSIGRLPT*HMLNSD
Trigger: ATCAGAATTAAGCATATGGCAGGTTGGTAATCTTCC...TATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTGGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR GCA 90 bp GAGACATTAACCAAATCATCCATATTGGTACATTCAAGTGCCATAAAAAGCAAGTCAACACTGGTTCTTTaGACACCCCTAAGTGATATG +
Preference number: 4 (lower is better)
Translates to: ETLTKSSILVHSSAIKSKSTLVL*TPLSDM
Trigger: CATATCACTTAGGGGTGTGCAAAGAACCAGTGTTGA...CTTGCTTTTTATGGCACTTGAATGTACCAATATGGATGATTTGGTTAATGTCTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR GCA 90 bp GTCCAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAAGTTTTTATTCCCCCTaGAATTTCTGTACTCTGCTA +
Preference number: 4 (lower is better)
Translates to: VQLRSFYSPCNFCTLLSISFYSP*NFCTLL
Trigger: TAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACT...TATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTGGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 7 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644470.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR GCA 90 bp AATTGTCCAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCACTGGCTTTCCCCTTaGTATGTTATTTATTCTTCC +
Preference number: 4 (lower is better)
Translates to: NCPIEKFLFPLQFLYSAIHWLSP*YVIYSS
Trigger: GGAAGAATAAATAACATAGCAAGGGGAAAGCCAGTG...GATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTGGACAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR CCA 90 bp CACTGTATCGAAATTTGGATCCTAGCGCAAGAAATTTGCTTTTGGGAATGGTGTTCTCTTCATCAAGACTaGTTCCAAATTCTATCTCTT +
Preference number: 4 (lower is better)
Translates to: HCIEIWILAQEICFWEWCSLHQD*FQILSL
Trigger: AAGAGATAGAATTTGGAACCAGTCTTGATGAAGAGA...ACACCATTCCCAAAAGCAAATTTCTTGCGCTAGGATCCAAATTTCGATACAGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
CDS-3UTR CCA 90 bp GGATCAATGAGATCTAGAAGAATCTCTTGGTATAAACTCCCAATAGAAACTGAAATGAAGATCCAAAGATaGGTCTGTTTTGAGTTCCGG +
Preference number: 4 (lower is better)
Translates to: GSMRSRRISWYKLPIETEMKIQR*VCFEFR
Trigger: CCGGAACTCAAAACAGACCCATCTTTGGATCTTCAT...TTCAGTTTCTATTGGGAGTTTATACCAAGAGATTCTTCTAGATCTCATTGATCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp GACATTAACCAAATCATCCATATTGGTACATTCAAGTGCCATAAAAAGCAAGCTATGAAGATCCAAAGATaGGTCTGTTTTGAGTTCCGG +
Preference number: 4 (lower is better)
Translates to: DINQIIHIGTFKCHKKQAMKIQR*VCFEFR
Trigger: CCGGAACTCAAAACAGACCCATCTTTGGATCTTCAT...AGCTTGCTTTTTATGGCACTTGAATGTACCAATATGGATGATTTGGTTAATGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CCA 90 bp GAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGTTTCTGTGCTGGGTCAGGTaGATAAAACTTTACATTAAA +
Preference number: 4 (lower is better)
Translates to: ESLKSDYGRLASLSFCWFLCWVR*IKLYIK
Trigger: TTTAATGTAAAGTTTTATCCACCTGACCCAGCACAG...AAACCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp ATTACTTTGGTGCTGCCAATCACTAATTGGGCAATGCCAATAATGAAGCATTCTCTGTGCTGGGTCAGGTaGATAAAACTTTACATTAAA +
Preference number: 4 (lower is better)
Translates to: ITLVLPITNWAMPIMKHSLCWVR*IKLYIK
Trigger: TTTAATGTAAAGTTTTATCCACCTGACCCAGCACAG...AGAATGCTTCATTATTGGCATTGCCCAATTAGTGATTGGCAGCACCAAAGTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000646800.1
CDS-3UTR CCA 90 bp AATCTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCCCAGTTCAGACTGGATaGTGTAAGAACCTAATAATG +
Preference number: 4 (lower is better)
Translates to: NLESLKSDYGRLASLSFCPVQTG*CKNLIM
Trigger: CATTATTAGGTTCTTACACCATCCAGTCTGAACTGG...GCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp CAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAGTCCACTGTATCGAAATTTaGATCCTAGCGCAAGAAATT +
Preference number: 4 (lower is better)
Translates to: QLRSFYSPCNFCTLLSIVHCIEI*ILAQEI
Trigger: AATTTCTTGCGCTAGGATCCAAATTTCGATACAGTG...GACTATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR CCA 90 bp GGATCAATGAGATCTAGAAGAATCTCTTGGTATAAACTCCCAATAGAAACTGAATTTTTCTGTGAGATTTaGTCTCCTGAGATGGGAGCT +
Preference number: 4 (lower is better)
Translates to: GSMRSRRISWYKLPIETEFFCEI*SPEMGA
Trigger: AGCTCCCATCTCAGGAGACCAAATCTCACAGAAAAA...TTCAGTTTCTATTGGGAGTTTATACCAAGAGATTCTTCTAGATCTCATTGATCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp ATCTTAATTCAGAGAAGGGTTTATGTACAGATCTTGAGTAAATCTGTGTTCCAGTCTTCATTTTCTTGCTaGGGCAAGGCTCTTTCAGTA +
Preference number: 4 (lower is better)
Translates to: ILIQRRVYVQILSKSVFQSSFSC*GKALSV
Trigger: TACTGAAAGAGCCTTGCCCCAGCAAGAAAATGAAGA...CTGGAACACAGATTTACTCAAGATCTGTACATAAACCCTTCTCTGAATTAAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CCA 90 bp GGACACATACTTGTCACAAGTGAACTTGAGGTCACAAAGCCATTGATTAAAAACAGGAATACGAGGAGATaGAAAAGTACTAAAGTAGAG +
Preference number: 4 (lower is better)
Translates to: GHILVTSELEVTKPLIKNRNTRR*KSTKVE
Trigger: CTCTACTTTAGTACTTTTCCATCTCCTCGTATTCCT...GTTTTTAATCAATGGCTTTGTGACCTCAAGTTCACTTGTGACAAGTATGTGTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CCA 90 bp GTCCAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAAGGAATACGAGGAGATaGAAAAGTACTAAAGTAGAG +
Preference number: 4 (lower is better)
Translates to: VQLRSFYSPCNFCTLLSIRNTRR*KSTKVE
Trigger: CTCTACTTTAGTACTTTTCCATCTCCTCGTATTCCT...TATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTGGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR CCA 90 bp ATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAGTCAACTGCCAATCACTAATTaGGCAATGCCAATAATGAAG +
Preference number: 4 (lower is better)
Translates to: IEKFLFPLQFLYSAIHSQLPITN*AMPIMK
Trigger: CTTCATTATTGGCATTGCCCAATTAGTGATTGGCAG...TTGACTATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR CCA 90 bp AATTGTCCAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCTGCCAATCACTAATTaGGCAATGCCAATAATGAAG +
Preference number: 4 (lower is better)
Translates to: NCPIEKFLFPLQFLYSAILPITN*AMPIMK
Trigger: CTTCATTATTGGCATTGCCCAATTAGTGATTGGCAG...GATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTGGACAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR CCA 90 bp GAGACATTAACCAAATCATCCATATTGGTACATTCAAGTGCCATAAAAAGCAAGAGTTCAAGGAATCACTaGCTTTCCCCTTGCTATGTT +
Preference number: 4 (lower is better)
Translates to: ETLTKSSILVHSSAIKSKSSRNH*LSPCYV
Trigger: AACATAGCAAGGGGAAAGCCAGTGATTCCTTGAACT...CTTGCTTTTTATGGCACTTGAATGTACCAATATGGATGATTTGGTTAATGTCTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR CCA 90 bp ATTACTTTGGTGCTGCCAATCACTAATTGGGCAATGCCAATAATGAAGCATTCTCTCAAAAATGATACTTaGGGATGTGCAAAGGATTTG +
Preference number: 4 (lower is better)
Translates to: ITLVLPITNWAMPIMKHSLKNDT*GCAKDL
Trigger: CAAATCCTTTGCACATCCCCAAGTATCATTTTTGAG...AGAATGCTTCATTATTGGCATTGCCCAATTAGTGATTGGCAGCACCAAAGTAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR CCA 90 bp ATTGTCCAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCCTCAAAAATGATACTTaGGGATGTGCAAAGGATTTG +
Preference number: 4 (lower is better)
Translates to: IVQLRSFYSPCNFCTLLSLKNDT*GCAKDL
Trigger: CAAATCCTTTGCACATCCCCAAGTATCATTTTTGAG...GGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTGGACAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
3UTR CAA 72 bp TATCGAAATTTGGATCCTAGCGCAAGAAATTTGCTTTaGGGAATGGTGTCTGTAGATGTCAATCTGAAAAAC +
Preference number: 4 (lower is better)
Translates to: YRNLDPSARNLL*GMVSVDVNLKN
Trigger: GTTTTTCAGATTGACATCTACAGACACCATTCCCAAAAGCAAATTTCTTGCGCTAGGATCCAAATTTCGATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
3UTR CAA 72 bp AAGATTGAGATGCTCACATACTCGTTTAAGCAAATCTaGTCCCTTAGCATGTTTCTCCACAACACATTCATA +
Preference number: 4 (lower is better)
Translates to: KIEMLTYSFKQI*SLSMFLHNTFI
Trigger: TATGAATGTGTTGTGGAGAAACATGCTAAGGGACAAGATTTGCTTAAACGAGTATGTGAGCATCTCAATCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643155.1
CDS-3UTR TCA 90 bp GGATCAATGAGATCTAGAAGAATCTCTTGGTATAAACTCCCAATAGAAACTGAACTTCTTCCAAAAGATTaGGATGCTCACATACTCGTT +
Preference number: 4 (lower is better)
Translates to: GSMRSRRISWYKLPIETELLPKD*DAHILV
Trigger: AACGAGTATGTGAGCATCTCAATCTTTTGGAAGAAG...TTCAGTTTCTATTGGGAGTTTATACCAAGAGATTCTTCTAGATCTCATTGATCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343067.9
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp ATCTTAATTCAGAGAAGGGTTTATGTACAGATCTTGAGTAAATCTGTGTTCCAGCTTCTTCCAAAAGATTaGGATGCTCACATACTCGTT +
Preference number: 4 (lower is better)
Translates to: ILIQRRVYVQILSKSVFQLLPKD*DAHILV
Trigger: AACGAGTATGTGAGCATCTCAATCTTTTGGAAGAAG...CTGGAACACAGATTTACTCAAGATCTGTACATAAACCCTTCTCTGAATTAAGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp TTCAACACAAGTACACGAACAAACAGGTCTGAAGTATATCAGGAAAACAAAGTACTTCTTCCAAAAGATTaGGATGCTCACATACTCGTT +
Preference number: 4 (lower is better)
Translates to: FNTSTRTNRSEVYQENKVLLPKD*DAHILV
Trigger: AACGAGTATGTGAGCATCTCAATCTTTTGGAAGAAG...TACTTTGTTTTCCTGATATACTTCAGACCTGTTTGTTCGTGTACTTGTGTTGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp ATATTGGCAGTGTTACCTTTAGGTAATACAAAGCTGGAATGCCCAATATTTTTCCTTCTTCCAAAAGATTaGGATGCTCACATACTCGTT +
Preference number: 4 (lower is better)
Translates to: ILAVLPLGNTKLECPIFFLLPKD*DAHILV
Trigger: AACGAGTATGTGAGCATCTCAATCTTTTGGAAGAAG...GAAAAATATTGGGCATTCCAGCTTTGTATTACCTAAAGGTAACACTGCCAATAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000644342.1
ENST00000646800.1
CDS-3UTR TCA 90 bp AATCTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCAATCTGAAAAACGTGTaGTGTTCTACACAGACTTTC +
Preference number: 4 (lower is better)
Translates to: NLESLKSDYGRLASLSFCNLKNV*CSTQTF
Trigger: GAAAGTCTGTGTAGAACATCACACGTTTTTCAGATT...GCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAGATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp TTCAACACAAGTACACGAACAAACAGGTCTGAAGTATATCAGGAAAACAAAGTATTTTTGATCTCCTCTTaGCTCTTGTCTAAATCCTCC +
Preference number: 4 (lower is better)
Translates to: FNTSTRTNRSEVYQENKVFLISS*LLSKSS
Trigger: GGAGGATTTAGACAAGAGTCAAGAGGAGATCAAAAA...TACTTTGTTTTCCTGATATACTTCAGACCTGTTTGTTCGTGTACTTGTGTTGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000643604.1
ENST00000644600.1
ENST00000644780.1
ENST00000646800.1
CDS-3UTR TCA 90 bp GGATCAATGAGATCTAGAAGAATCTCTTGGTATAAACTCCCAATAGAAACTGAATCTTTTTCAGCTCACTaGTGCTGGCATGATGTTTTT +
Preference number: 4 (lower is better)
Translates to: GSMRSRRISWYKLPIETESFSAH*CWHDVF
Trigger: AAAAACATCATGCCAGCATCAGTGAGCTGAAAAAGA...TTCAGTTTCTATTGGGAGTTTATACCAAGAGATTCTTCTAGATCTCATTGATCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
CDS-3UTR TCA 90 bp TTCAACACAAGTACACGAACAAACAGGTCTGAAGTATATCAGGAAAACAAAGTATCTTTTTCAGCTCACTaGTGCTGGCATGATGTTTTT +
Preference number: 4 (lower is better)
Translates to: FNTSTRTNRSEVYQENKVSFSAH*CWHDVF
Trigger: AAAAACATCATGCCAGCATCAGTGAGCTGAAAAAGA...TACTTTGTTTTCCTGATATACTTCAGACCTGTTTGTTCGTGTACTTGTGTTGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp GGATCAATGAGATCTAGAAGAATCTCTTGGTATAAACTCCCAATAGAAACTGAATTCAATACGTGTCTCTaGAATCCCACCTTTTACAGT +
Preference number: 4 (lower is better)
Translates to: GSMRSRRISWYKLPIETEFNTCL*NPTFYS
Trigger: ACTGTAAAAGGTGGGATTTCAGAGACACGTATTGAA...TTCAGTTTCTATTGGGAGTTTATACCAAGAGATTCTTCTAGATCTCATTGATCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp GGATCAATGAGATCTAGAAGAATCTCTTGGTATAAACTCCCAATAGAAACTGAAATAATCTTGAAAGTCTaGAGTCTGACTATGGCAGGT +
Preference number: 4 (lower is better)
Translates to: GSMRSRRISWYKLPIETEIILKV*SLTMAG
Trigger: ACCTGCCATAGTCAGACTTCAGACTTTCAAGATTAT...TTCAGTTTCTATTGGGAGTTTATACCAAGAGATTCTTCTAGATCTCATTGATCC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp AATCTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTTTTTGATCTCCTCTTaGCTCTTGTCTAAATCCTGT +
Preference number: 4 (lower is better)
Translates to: NLESLKSDYGRLASLSFCFLISS*LLSKSC
Trigger: ACAGGATTTAGACAAGAGTCAAGAGGAGATCAAAAA...GCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAGATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000349460.9
CDS-3UTR TCA 90 bp ATCTTAATTCAGAGAAGGGTTTATGTACAGATCTTGAGTAAATCTGTGTTCCAGTTTTTGAGAGACTTGTaGTCCTCAGGGATTGGAATA +
Preference number: 4 (lower is better)
Translates to: ILIQRRVYVQILSKSVFQFLRDL*SSGIGI
Trigger: TATTCCAATCCCTGAGGATCACAAGTCTCTCAAAAA...CTGGAACACAGATTTACTCAAGATCTGTACATAAACCCTTCTCTGAATTAAGAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp ACTCCTTTGTACCCCACAATACATACTCTACAAAGAGTAACATTTGACAGAAAATTTTTGAGAGACTTGTaGTCCTCAGGGATTGGAATA +
Preference number: 4 (lower is better)
Translates to: TPLYPTIHTLQRVTFDRKFLRDL*SSGIGI
Trigger: TATTCCAATCCCTGAGGATCACAAGTCTCTCAAAAA...TTTTCTGTCAAATGTTACTCTTTGTAGAGTATGTATTGTGGGGTACAAAGGAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR TCA 90 bp ATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAGTCAAACGAACAAACAGGTCTaGAGTATATCAGGAAAACAA +
Preference number: 4 (lower is better)
Translates to: IEKFLFPLQFLYSAIHSQTNKQV*SISGKQ
Trigger: TTGTTTTCCTGATATACTTCAGACCTGTTTGTTCGT...TTGACTATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR TCA 90 bp AATTGTCCAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCGACAGATGTTATCTATaGAAGGAAAAACTTGGCTCT +
Preference number: 4 (lower is better)
Translates to: NCPIEKFLFPLQFLYSAIDRCYL*KEKLGS
Trigger: AGAGCCAAGTTTTTCCTTTCATAGATAACATCTGTC...GATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTGGACAATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644470.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR TCA 90 bp AATTGTCCAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCAGATACCTTTTTGAGTaGGTGAACATTAGAACGGAA +
Preference number: 4 (lower is better)
Translates to: NCPIEKFLFPLQFLYSAIRYLFE*VNIRTE
Trigger: TTCCGTTCTAATGTTCACTCACTCAAAAAGGTATCT...GATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTGGACAATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR GCA 90 bp GGATCAATGAGATCTAGAAGAATCTCTTGGTATAAACTCCCAATAGAAACTGAAATTATCTCCTTCAGCTaGTGTTTGACAAGATTCCTC +
Preference number: 4 (lower is better)
Translates to: GSMRSRRISWYKLPIETEIISFS*CLTRFL
Trigger: GAGGAATCTTGTCAAACAGCAGCTGAAGGAGATAAT...TTCAGTTTCTATTGGGAGTTTATACCAAGAGATTCTTCTAGATCTCATTGATCC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp ACTCCTTTGTACCCCACAATACATACTCTACAAAGAGTAACATTTGACAGAAAAGCTGTGTTTCTGCACTaGTTAATGAATGAAGATCCA +
Preference number: 4 (lower is better)
Translates to: TPLYPTIHTLQRVTFDRKAVFLH*LMNEDP
Trigger: TGGATCTTCATTCATTAAGCAGTGCAGAAACACAGC...TTTTCTGTCAAATGTTACTCTTTGTAGAGTATGTATTGTGGGGTACAAAGGAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR GCA 90 bp GACATTAACCAAATCATCCATATTGGTACATTCAAGTGCCATAAAAAGCAAGCTGCTGTGTTTCTGCACTaGTTAATGAATGAAGATCCA +
Preference number: 4 (lower is better)
Translates to: DINQIIHIGTFKCHKKQAAVFLH*LMNEDP
Trigger: TGGATCTTCATTCATTAAGCAGTGCAGAAACACAGC...AGCTTGCTTTTTATGGCACTTGAATGTACCAATATGGATGATTTGGTTAATGTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR GCA 90 bp AATCTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTCCAAAAGATTGAGATaGTCACATACTCGTTTAAGC +
Preference number: 4 (lower is better)
Translates to: NLESLKSDYGRLASLSFCSKRLR*SHTRLS
Trigger: GCTTAAACGAGTATGTGAGCATCTCAATCTTTTGGA...GCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000343067.9
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp GGATCAATGAGATCTAGAAGAATCTCTTGGTATAAACTCCCAATAGAAACTGAATCCTTCCAAGTCCTTTaGTTTATGAAGATCAACTCC +
Preference number: 4 (lower is better)
Translates to: GSMRSRRISWYKLPIETESFQVL*FMKINS
Trigger: GGAGTTGATCTTCATAAAGCAAAGGACTTGGAAGGA...TTCAGTTTCTATTGGGAGTTTATACCAAGAGATTCTTCTAGATCTCATTGATCC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp ATCTTAATTCAGAGAAGGGTTTATGTACAGATCTTGAGTAAATCTGTGTTCCAGTCCTTCCAAGTCCTTTaGTTTATGAAGATCAACTCC +
Preference number: 4 (lower is better)
Translates to: ILIQRRVYVQILSKSVFQSFQVL*FMKINS
Trigger: GGAGTTGATCTTCATAAAGCAAAGGACTTGGAAGGA...CTGGAACACAGATTTACTCAAGATCTGTACATAAACCCTTCTCTGAATTAAGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR GCA 90 bp GACATTAACCAAATCATCCATATTGGTACATTCAAGTGCCATAAAAAGCAAGCTTCCTTCCAAGTCCTTTaGTTTATGAAGATCAACTCC +
Preference number: 4 (lower is better)
Translates to: DINQIIHIGTFKCHKKQASFQVL*FMKINS
Trigger: GGAGTTGATCTTCATAAAGCAAAGGACTTGGAAGGA...AGCTTGCTTTTTATGGCACTTGAATGTACCAATATGGATGATTTGGTTAATGTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR GCA 90 bp GGATCAATGAGATCTAGAAGAATCTCTTGGTATAAACTCCCAATAGAAACTGAAGCTTTTGGCCCAAAGTaGCTATTTTTCTGTGAGATT +
Preference number: 4 (lower is better)
Translates to: GSMRSRRISWYKLPIETEAFGPK*LFFCEI
Trigger: AATCTCACAGAAAAATAGGCACTTTGGGCCAAAAGC...TTCAGTTTCTATTGGGAGTTTATACCAAGAGATTCTTCTAGATCTCATTGATCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR GCA 90 bp ACTCCTTTGTACCCCACAATACATACTCTACAAAGAGTAACATTTGACAGAAAAATTTCTTCATTTTCTTaGTGGGGCAAGGCTCTTTCA +
Preference number: 4 (lower is better)
Translates to: TPLYPTIHTLQRVTFDRKISSFS*WGKALS
Trigger: TGAAAGAGCCTTGCCCCAGCAAGAAAATGAAGAAAT...TTTTCTGTCAAATGTTACTCTTTGTAGAGTATGTATTGTGGGGTACAAAGGAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR GCA 90 bp ATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAGTCAAAGTTTTTATTCCCCCTaGAATTTCTGTACTCTGCTA +
Preference number: 4 (lower is better)
Translates to: IEKFLFPLQFLYSAIHSQSFYSP*NFCTLL
Trigger: TAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACT...TTGACTATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 7 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644470.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR GCA 90 bp TTCAACACAAGTACACGAACAAACAGGTCTGAAGTATATCAGGAAAACAAAGTACACTGGCTTTCCCCTTaGTATGTTATTTATTCTTCC +
Preference number: 4 (lower is better)
Translates to: FNTSTRTNRSEVYQENKVHWLSP*YVIYSS
Trigger: GGAAGAATAAATAACATAGCAAGGGGAAAGCCAGTG...TACTTTGTTTTCCTGATATACTTCAGACCTGTTTGTTCGTGTACTTGTGTTGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR GCA 90 bp CAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAGTCTGTAACACAATAGGGTaGTCAATAGATACCTTTTTG +
Preference number: 4 (lower is better)
Translates to: QLRSFYSPCNFCTLLSIVCNTIG*SIDTFL
Trigger: CAAAAAGGTATCTATTGAGCACCCTATTGTGTTACA...GACTATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR CCA 90 bp GAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGTTTTCTCTTCATCAAGACTaGTTCCAAATTCTATCTCTT +
Preference number: 4 (lower is better)
Translates to: ESLKSDYGRLASLSFCWFSLHQD*FQILSL
Trigger: AAGAGATAGAATTTGGAACCAGTCTTGATGAAGAGA...AAACCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp ATTGTCCAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCTCTCTTCATCAAGACTaGTTCCAAATTCTATCTCTT +
Preference number: 4 (lower is better)
Translates to: IVQLRSFYSPCNFCTLLSSLHQD*FQILSL
Trigger: AAGAGATAGAATTTGGAACCAGTCTTGATGAAGAGA...GGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTGGACAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000646800.1
CDS-3UTR CCA 90 bp GAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGTTTCTTTTACTTCTATTTTaGAGCACTCTTCAAGTCCTT +
Preference number: 4 (lower is better)
Translates to: ESLKSDYGRLASLSFCWFLLLLF*STLQVL
Trigger: AAGGACTTGAAGAGTGCTCCAAAATAGAAGTAAAAG...AAACCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp AATCTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTTGCGTTATCCCAAATaGCTAGACCAAAATAGTCTT +
Preference number: 4 (lower is better)
Translates to: NLESLKSDYGRLASLSFCLRYPK*LDQNSL
Trigger: AAGACTATTTTGGTCTAGCCATTTGGGATAACGCAA...GCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000343067.9
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp AATTGTCCAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCTTGCGTTATCCCAAATaGCTAGACCAAAATAGTCTT +
Preference number: 4 (lower is better)
Translates to: NCPIEKFLFPLQFLYSAILRYPK*LDQNSL
Trigger: AAGACTATTTTGGTCTAGCCATTTGGGATAACGCAA...GATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTGGACAATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000646800.1
CDS-3UTR CCA 90 bp ATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAGTCAATTGCGTTATCCCAAATaGCTAGACCAAAATAGTCTT +
Preference number: 4 (lower is better)
Translates to: IEKFLFPLQFLYSAIHSQLRYPK*LDQNSL
Trigger: AAGACTATTTTGGTCTAGCCATTTGGGATAACGCAA...TTGACTATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000646800.1
CDS-3UTR CCA 90 bp ACTCCTTTGTACCCCACAATACATACTCTACAAAGAGTAACATTTGACAGAAAACCAGTTCAGACTGGATaGTGTAAGAACCTAATAATG +
Preference number: 4 (lower is better)
Translates to: TPLYPTIHTLQRVTFDRKPVQTG*CKNLIM
Trigger: CATTATTAGGTTCTTACACCATCCAGTCTGAACTGG...TTTTCTGTCAAATGTTACTCTTTGTAGAGTATGTATTGTGGGGTACAAAGGAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CCA 90 bp TTCAACACAAGTACACGAACAAACAGGTCTGAAGTATATCAGGAAAACAAAGTACCAGTTCAGACTGGATaGTGTAAGAACCTAATAATG +
Preference number: 4 (lower is better)
Translates to: FNTSTRTNRSEVYQENKVPVQTG*CKNLIM
Trigger: CATTATTAGGTTCTTACACCATCCAGTCTGAACTGG...TACTTTGTTTTCCTGATATACTTCAGACCTGTTTGTTCGTGTACTTGTGTTGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CCA 90 bp GAGACATTAACCAAATCATCCATATTGGTACATTCAAGTGCCATAAAAAGCAAGCCAGTTCAGACTGGATaGTGTAAGAACCTAATAATG +
Preference number: 4 (lower is better)
Translates to: ETLTKSSILVHSSAIKSKPVQTG*CKNLIM
Trigger: CATTATTAGGTTCTTACACCATCCAGTCTGAACTGG...CTTGCTTTTTATGGCACTTGAATGTACCAATATGGATGATTTGGTTAATGTCTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CCA 90 bp AATCTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCCACTGTATCGAAATTTaGATCCTAGCGCAAGAAATT +
Preference number: 4 (lower is better)
Translates to: NLESLKSDYGRLASLSFCHCIEI*ILAQEI
Trigger: AATTTCTTGCGCTAGGATCCAAATTTCGATACAGTG...GCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp AATTGTCCAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCACTGTATCGAAATTTaGATCCTAGCGCAAGAAATT +
Preference number: 4 (lower is better)
Translates to: NCPIEKFLFPLQFLYSAIHCIEI*ILAQEI
Trigger: AATTTCTTGCGCTAGGATCCAAATTTCGATACAGTG...GATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTGGACAATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR CCA 90 bp AATTGTCCAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCAGGAATACGAGGAGATaGAAAAGTACTAAAGTAGAG +
Preference number: 4 (lower is better)
Translates to: NCPIEKFLFPLQFLYSAIRNTRR*KSTKVE
Trigger: CTCTACTTTAGTACTTTTCCATCTCCTCGTATTCCT...GATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTGGACAATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR CCA 90 bp GAGACATTAACCAAATCATCCATATTGGTACATTCAAGTGCCATAAAAAGCAAGCTGCCAATCACTAATTaGGCAATGCCAATAATGAAG +
Preference number: 4 (lower is better)
Translates to: ETLTKSSILVHSSAIKSKLPITN*AMPIMK
Trigger: CTTCATTATTGGCATTGCCCAATTAGTGATTGGCAG...CTTGCTTTTTATGGCACTTGAATGTACCAATATGGATGATTTGGTTAATGTCTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR CCA 90 bp AGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAGTCAAGACATTTGGCAATTTATCCTaGCAAAGTTTCTGTAACACA +
Preference number: 4 (lower is better)
Translates to: RSFYSPCNFCTLLSIVKTFGNLS*QSFCNT
Trigger: TGTGTTACAGAAACTTTGCCAGGATAAATTGCCAAA...TGTCTTGACTATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR CCA 90 bp GGACACATACTTGTCACAAGTGAACTTGAGGTCACAAAGCCATTGATTAAAAACGATGTGCAAAGGATTTaGAAGTATCTTTTAGACACT +
Preference number: 4 (lower is better)
Translates to: GHILVTSELEVTKPLIKNDVQRI*KYLLDT
Trigger: AGTGTCTAAAAGATACTTCCAAATCCTTTGCACATC...GTTTTTAATCAATGGCTTTGTGACCTCAAGTTCACTTGTGACAAGTATGTGTCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR CCA 90 bp ATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAGTCAACTCAAAAATGATACTTaGGGATGTGCAAAGGATTTG +
Preference number: 4 (lower is better)
Translates to: IEKFLFPLQFLYSAIHSQLKNDT*GCAKDL
Trigger: CAAATCCTTTGCACATCCCCAAGTATCATTTTTGAG...TTGACTATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR TCA 90 bp GGATCAATGAGATCTAGAAGAATCTCTTGGTATAAACTCCCAATAGAAACTGAAAATCTGAAAAACGTGTaGTGTTCTACACAGACTTTC +
Preference number: 4 (lower is better)
Translates to: GSMRSRRISWYKLPIETENLKNV*CSTQTF
Trigger: GAAAGTCTGTGTAGAACATCACACGTTTTTCAGATT...TTCAGTTTCTATTGGGAGTTTATACCAAGAGATTCTTCTAGATCTCATTGATCC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp GGATCAATGAGATCTAGAAGAATCTCTTGGTATAAACTCCCAATAGAAACTGAATATCAGCATCTCCTGTaGTCACAATTCTCTTTTCAA +
Preference number: 4 (lower is better)
Translates to: GSMRSRRISWYKLPIETEYQHLL*SQFSFQ
Trigger: TTGAAAAGAGAATTGTGATCACAGGAGATGCTGATA...TTCAGTTTCTATTGGGAGTTTATACCAAGAGATTCTTCTAGATCTCATTGATCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR TCA 90 bp TTCAACACAAGTACACGAACAAACAGGTCTGAAGTATATCAGGAAAACAAAGTATTTTTGATCTCCTCTTaGCTCTTGTCTAAATCCTGT +
Preference number: 4 (lower is better)
Translates to: FNTSTRTNRSEVYQENKVFLISS*LLSKSC
Trigger: ACAGGATTTAGACAAGAGTCAAGAGGAGATCAAAAA...TACTTTGTTTTCCTGATATACTTCAGACCTGTTTGTTCGTGTACTTGTGTTGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644342.1
CDS-3UTR TCA 90 bp ACTCCTTTGTACCCCACAATACATACTCTACAAAGAGTAACATTTGACAGAAAATTTTTGATCTCCTCTTaGCTCTTGTCTAAATCCTTC +
Preference number: 4 (lower is better)
Translates to: TPLYPTIHTLQRVTFDRKFLISS*LLSKSF
Trigger: GAAGGATTTAGACAAGAGTCAAGAGGAGATCAAAAA...TTTTCTGTCAAATGTTACTCTTTGTAGAGTATGTATTGTGGGGTACAAAGGAGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000644848.1
ENST00000646189.1
ENST00000650265.1
CDS-3UTR TCA 90 bp ACTCCTTTGTACCCCACAATACATACTCTACAAAGAGTAACATTTGACAGAAAAGACAGATGTTATCTATaGAAGGAAAAACTTGGCTCT +
Preference number: 4 (lower is better)
Translates to: TPLYPTIHTLQRVTFDRKDRCYL*KEKLGS
Trigger: AGAGCCAAGTTTTTCCTTTCATAGATAACATCTGTC...TTTTCTGTCAAATGTTACTCTTTGTAGAGTATGTATTGTGGGGTACAAAGGAGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR TCA 90 bp TTCAACACAAGTACACGAACAAACAGGTCTGAAGTATATCAGGAAAACAAAGTAGACAGATGTTATCTATaGAAGGAAAAACTTGGCTCT +
Preference number: 4 (lower is better)
Translates to: FNTSTRTNRSEVYQENKVDRCYL*KEKLGS
Trigger: AGAGCCAAGTTTTTCCTTTCATAGATAACATCTGTC...TACTTTGTTTTCCTGATATACTTCAGACCTGTTTGTTCGTGTACTTGTGTTGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR GCA 90 bp ACTCCTTTGTACCCCACAATACATACTCTACAAAGAGTAACATTTGACAGAAAATCCAAAAGATTGAGATaGTCACATACTCGTTTAAGC +
Preference number: 4 (lower is better)
Translates to: TPLYPTIHTLQRVTFDRKSKRLR*SHTRLS
Trigger: GCTTAAACGAGTATGTGAGCATCTCAATCTTTTGGA...TTTTCTGTCAAATGTTACTCTTTGTAGAGTATGTATTGTGGGGTACAAAGGAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR GCA 90 bp TTCAACACAAGTACACGAACAAACAGGTCTGAAGTATATCAGGAAAACAAAGTAAGTTTTTATTCCCCCTaGAATTTCTGTACTCTGCTA +
Preference number: 4 (lower is better)
Translates to: FNTSTRTNRSEVYQENKVSFYSP*NFCTLL
Trigger: TAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACT...TACTTTGTTTTCCTGATATACTTCAGACCTGTTTGTTCGTGTACTTGTGTTGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR GCA 90 bp AATTGTCCAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCTGTAACACAATAGGGTaGTCAATAGATACCTTTTTG +
Preference number: 4 (lower is better)
Translates to: NCPIEKFLFPLQFLYSAICNTIG*SIDTFL
Trigger: CAAAAAGGTATCTATTGAGCACCCTATTGTGTTACA...GATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTGGACAATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR CCA 90 bp AATCTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTCTCTTCATCAAGACTaGTTCCAAATTCTATCTCTT +
Preference number: 4 (lower is better)
Translates to: NLESLKSDYGRLASLSFCSLHQD*FQILSL
Trigger: AAGAGATAGAATTTGGAACCAGTCTTGATGAAGAGA...GCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAGATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp AATCTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCCTTTTACTTCTATTTTaGAGCACTCTTCAAGTCCTT +
Preference number: 4 (lower is better)
Translates to: NLESLKSDYGRLASLSFCLLLLF*STLQVL
Trigger: AAGGACTTGAAGAGTGCTCCAAAATAGAAGTAAAAG...GCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAGATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp ATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAGTCAACTTTTACTTCTATTTTaGAGCACTCTTCAAGTCCTT +
Preference number: 4 (lower is better)
Translates to: IEKFLFPLQFLYSAIHSQLLLLF*STLQVL
Trigger: AAGGACTTGAAGAGTGCTCCAAAATAGAAGTAAAAG...TTGACTATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000646800.1
CDS-3UTR CCA 90 bp GGATCAATGAGATCTAGAAGAATCTCTTGGTATAAACTCCCAATAGAAACTGAATTGCGTTATCCCAAATaGCTAGACCAAAATAGTCTT +
Preference number: 4 (lower is better)
Translates to: GSMRSRRISWYKLPIETELRYPK*LDQNSL
Trigger: AAGACTATTTTGGTCTAGCCATTTGGGATAACGCAA...TTCAGTTTCTATTGGGAGTTTATACCAAGAGATTCTTCTAGATCTCATTGATCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343067.9
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp GACATTAACCAAATCATCCATATTGGTACATTCAAGTGCCATAAAAAGCAAGCTTTGCGTTATCCCAAATaGCTAGACCAAAATAGTCTT +
Preference number: 4 (lower is better)
Translates to: DINQIIHIGTFKCHKKQALRYPK*LDQNSL
Trigger: AAGACTATTTTGGTCTAGCCATTTGGGATAACGCAA...AGCTTGCTTTTTATGGCACTTGAATGTACCAATATGGATGATTTGGTTAATGTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CCA 90 bp GACATTAACCAAATCATCCATATTGGTACATTCAAGTGCCATAAAAAGCAAGCTCTGTGCTGGGTCAGGTaGATAAAACTTTACATTAAA +
Preference number: 4 (lower is better)
Translates to: DINQIIHIGTFKCHKKQALCWVR*IKLYIK
Trigger: TTTAATGTAAAGTTTTATCCACCTGACCCAGCACAG...AGCTTGCTTTTTATGGCACTTGAATGTACCAATATGGATGATTTGGTTAATGTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CCA 90 bp ACTCCTTTGTACCCCACAATACATACTCTACAAAGAGTAACATTTGACAGAAAACTGTGCTGGGTCAGGTaGATAAAACTTTACATTAAA +
Preference number: 4 (lower is better)
Translates to: TPLYPTIHTLQRVTFDRKLCWVR*IKLYIK
Trigger: TTTAATGTAAAGTTTTATCCACCTGACCCAGCACAG...TTTTCTGTCAAATGTTACTCTTTGTAGAGTATGTATTGTGGGGTACAAAGGAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CCA 90 bp TTCAACACAAGTACACGAACAAACAGGTCTGAAGTATATCAGGAAAACAAAGTACTGTGCTGGGTCAGGTaGATAAAACTTTACATTAAA +
Preference number: 4 (lower is better)
Translates to: FNTSTRTNRSEVYQENKVLCWVR*IKLYIK
Trigger: TTTAATGTAAAGTTTTATCCACCTGACCCAGCACAG...TACTTTGTTTTCCTGATATACTTCAGACCTGTTTGTTCGTGTACTTGTGTTGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CCA 90 bp GGATCAATGAGATCTAGAAGAATCTCTTGGTATAAACTCCCAATAGAAACTGAACACTGTATCGAAATTTaGATCCTAGCGCAAGAAATT +
Preference number: 4 (lower is better)
Translates to: GSMRSRRISWYKLPIETEHCIEI*ILAQEI
Trigger: AATTTCTTGCGCTAGGATCCAAATTTCGATACAGTG...TTCAGTTTCTATTGGGAGTTTATACCAAGAGATTCTTCTAGATCTCATTGATCC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp ATCTTAATTCAGAGAAGGGTTTATGTACAGATCTTGAGTAAATCTGTGTTCCAGCACTGTATCGAAATTTaGATCCTAGCGCAAGAAATT +
Preference number: 4 (lower is better)
Translates to: ILIQRRVYVQILSKSVFQHCIEI*ILAQEI
Trigger: AATTTCTTGCGCTAGGATCCAAATTTCGATACAGTG...CTGGAACACAGATTTACTCAAGATCTGTACATAAACCCTTCTCTGAATTAAGAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CCA 90 bp GACATTAACCAAATCATCCATATTGGTACATTCAAGTGCCATAAAAAGCAAGCTCACTGTATCGAAATTTaGATCCTAGCGCAAGAAATT +
Preference number: 4 (lower is better)
Translates to: DINQIIHIGTFKCHKKQAHCIEI*ILAQEI
Trigger: AATTTCTTGCGCTAGGATCCAAATTTCGATACAGTG...AGCTTGCTTTTTATGGCACTTGAATGTACCAATATGGATGATTTGGTTAATGTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CCA 90 bp ACTCCTTTGTACCCCACAATACATACTCTACAAAGAGTAACATTTGACAGAAAACACTGTATCGAAATTTaGATCCTAGCGCAAGAAATT +
Preference number: 4 (lower is better)
Translates to: TPLYPTIHTLQRVTFDRKHCIEI*ILAQEI
Trigger: AATTTCTTGCGCTAGGATCCAAATTTCGATACAGTG...TTTTCTGTCAAATGTTACTCTTTGTAGAGTATGTATTGTGGGGTACAAAGGAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CCA 90 bp GACATTAACCAAATCATCCATATTGGTACATTCAAGTGCCATAAAAAGCAAGCTAGGAATACGAGGAGATaGAAAAGTACTAAAGTAGAG +
Preference number: 4 (lower is better)
Translates to: DINQIIHIGTFKCHKKQARNTRR*KSTKVE
Trigger: CTCTACTTTAGTACTTTTCCATCTCCTCGTATTCCT...AGCTTGCTTTTTATGGCACTTGAATGTACCAATATGGATGATTTGGTTAATGTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CCA 90 bp ATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAGTCAAGATGTGCAAAGGATTTaGAAGTATCTTTTAGACACT +
Preference number: 4 (lower is better)
Translates to: IEKFLFPLQFLYSAIHSQDVQRI*KYLLDT
Trigger: AGTGTCTAAAAGATACTTCCAAATCCTTTGCACATC...TTGACTATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR CCA 90 bp AATTGTCCAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCGATGTGCAAAGGATTTaGAAGTATCTTTTAGACACT +
Preference number: 4 (lower is better)
Translates to: NCPIEKFLFPLQFLYSAIDVQRI*KYLLDT
Trigger: AGTGTCTAAAAGATACTTCCAAATCCTTTGCACATC...GATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTGGACAATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
3UTR CAA 72 bp AGTATCTTAATTCAGAGAAGGGTTTATGTACAGATCTaGAGTAAATCTGTGTTCCAGACTTTTAAGGATAGG +
Preference number: 4 (lower is better)
Translates to: SILIQRRVYVQI*SKSVFQTFKDR
Trigger: CCTATCCTTAAAAGTCTGGAACACAGATTTACTCAAGATCTGTACATAAACCCTTCTCTGAATTAAGATACT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CCA 90 bp GGATCAATGAGATCTAGAAGAATCTCTTGGTATAAACTCCCAATAGAAACTGAATCTCTTCATCAAGACTaGTTCCAAATTCTATCTCTT +
Preference number: 4 (lower is better)
Translates to: GSMRSRRISWYKLPIETESLHQD*FQILSL
Trigger: AAGAGATAGAATTTGGAACCAGTCTTGATGAAGAGA...TTCAGTTTCTATTGGGAGTTTATACCAAGAGATTCTTCTAGATCTCATTGATCC
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp ATCTTAATTCAGAGAAGGGTTTATGTACAGATCTTGAGTAAATCTGTGTTCCAGTCTCTTCATCAAGACTaGTTCCAAATTCTATCTCTT +
Preference number: 4 (lower is better)
Translates to: ILIQRRVYVQILSKSVFQSLHQD*FQILSL
Trigger: AAGAGATAGAATTTGGAACCAGTCTTGATGAAGAGA...CTGGAACACAGATTTACTCAAGATCTGTACATAAACCCTTCTCTGAATTAAGAT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CCA 90 bp ACTCCTTTGTACCCCACAATACATACTCTACAAAGAGTAACATTTGACAGAAAATCTCTTCATCAAGACTaGTTCCAAATTCTATCTCTT +
Preference number: 4 (lower is better)
Translates to: TPLYPTIHTLQRVTFDRKSLHQD*FQILSL
Trigger: AAGAGATAGAATTTGGAACCAGTCTTGATGAAGAGA...TTTTCTGTCAAATGTTACTCTTTGTAGAGTATGTATTGTGGGGTACAAAGGAGT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CCA 90 bp GACATTAACCAAATCATCCATATTGGTACATTCAAGTGCCATAAAAAGCAAGCTTCTCTTCATCAAGACTaGTTCCAAATTCTATCTCTT +
Preference number: 4 (lower is better)
Translates to: DINQIIHIGTFKCHKKQASLHQD*FQILSL
Trigger: AAGAGATAGAATTTGGAACCAGTCTTGATGAAGAGA...AGCTTGCTTTTTATGGCACTTGAATGTACCAATATGGATGATTTGGTTAATGTC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CCA 90 bp GGATCAATGAGATCTAGAAGAATCTCTTGGTATAAACTCCCAATAGAAACTGAACTTTTACTTCTATTTTaGAGCACTCTTCAAGTCCTT +
Preference number: 4 (lower is better)
Translates to: GSMRSRRISWYKLPIETELLLLF*STLQVL
Trigger: AAGGACTTGAAGAGTGCTCCAAAATAGAAGTAAAAG...TTCAGTTTCTATTGGGAGTTTATACCAAGAGATTCTTCTAGATCTCATTGATCC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CCA 90 bp TTCAACACAAGTACACGAACAAACAGGTCTGAAGTATATCAGGAAAACAAAGTACTTTTACTTCTATTTTaGAGCACTCTTCAAGTCCTT +
Preference number: 4 (lower is better)
Translates to: FNTSTRTNRSEVYQENKVLLLLF*STLQVL
Trigger: AAGGACTTGAAGAGTGCTCCAAAATAGAAGTAAAAG...TACTTTGTTTTCCTGATATACTTCAGACCTGTTTGTTCGTGTACTTGTGTTGAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CCA 90 bp GACATTAACCAAATCATCCATATTGGTACATTCAAGTGCCATAAAAAGCAAGCTCTTTTACTTCTATTTTaGAGCACTCTTCAAGTCCTT +
Preference number: 4 (lower is better)
Translates to: DINQIIHIGTFKCHKKQALLLLF*STLQVL
Trigger: AAGGACTTGAAGAGTGCTCCAAAATAGAAGTAAAAG...AGCTTGCTTTTTATGGCACTTGAATGTACCAATATGGATGATTTGGTTAATGTC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CCA 90 bp ATCTTAATTCAGAGAAGGGTTTATGTACAGATCTTGAGTAAATCTGTGTTCCAGCTTTTACTTCTATTTTaGAGCACTCTTCAAGTCCTT +
Preference number: 4 (lower is better)
Translates to: ILIQRRVYVQILSKSVFQLLLLF*STLQVL
Trigger: AAGGACTTGAAGAGTGCTCCAAAATAGAAGTAAAAG...CTGGAACACAGATTTACTCAAGATCTGTACATAAACCCTTCTCTGAATTAAGAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CCA 90 bp GAGACATTAACCAAATCATCCATATTGGTACATTCAAGTGCCATAAAAAGCAAGTTTGGCAATTTATCCTaGCAAAGTTTCTGTAACACA +
Preference number: 4 (lower is better)
Translates to: ETLTKSSILVHSSAIKSKFGNLS*QSFCNT
Trigger: TGTGTTACAGAAACTTTGCCAGGATAAATTGCCAAA...CTTGCTTTTTATGGCACTTGAATGTACCAATATGGATGATTTGGTTAATGTCTC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR CCA 90 bp GACATTAACCAAATCATCCATATTGGTACATTCAAGTGCCATAAAAAGCAAGCTTTTGGCAATTTATCCTaGCAAAGTTTCTGTAACACA +
Preference number: 4 (lower is better)
Translates to: DINQIIHIGTFKCHKKQAFGNLS*QSFCNT
Trigger: TGTGTTACAGAAACTTTGCCAGGATAAATTGCCAAA...AGCTTGCTTTTTATGGCACTTGAATGTACCAATATGGATGATTTGGTTAATGTC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS CCA 90 bp GGGGCCGGGCTCCTGCGCCCGCCACTGCTGCAGCCCGACGAACAATaGCAGGAGGAGGCGCCGGCGTCCGAGGCTCGGGCCCTCTGCGGC +
Preference number: 5 (lower is better)
Translates to: GAGLLRPPLLQPDEQ*QEEAPASEARALCG
Trigger: GCCGCAGAGGGCCCGAGCCTCGGACGCCGGCGCCTCCTCCTGCCATTGTTCGTCGGGCTGCAGCAGTGGCGGGCGCAGGAGCCCGGCCCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000343067.9
ENST00000349460.9
ENST00000373797.2
ENST00000643173.1
ENST00000643604.1
ENST00000644600.1
ENST00000644780.1
ENST00000645184.1
ENST00000648181.1
ENST00000648891.1
ENST00000649674.1
ENST00000650265.1
CDS GCA 90 bp TGCTCACCGGTGGCTCCGGGGCCGGGCTCCTGCGCCCGCCACTGCTaGAGCCCGACGAACAATGGCAGGAGGAGGCGCCGGCGTCCGAGG +
Preference number: 5 (lower is better)
Translates to: CSPVAPGPGSCARHC*SPTNNGRRRRRRPR
Trigger: CCTCGGACGCCGGCGCCTCCTCCTGCCATTGTTCGTCGGGCTGCAGCAGTGGCGGGCGCAGGAGCCCGGCCCCGGAGCCACCGGTGAGCA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648181.1
CDS TCA 90 bp CGGGCCCTCTGCGGCTCGCGGGCCCGCCGGCTGCTGCTGGCTGACTaGCTAAACGCACCAGCGGAGGGAGGGAGCGAGCGAGCGACCCTG +
Preference number: 5 (lower is better)
Translates to: RALCGSRARRLLLAD*LNAPAEGGSERATL
Trigger: CAGGGTCGCTCGCTCGCTCCCTCCCTCCGCTGGTGCGTTTAGTCAGTCAGCCAGCAGCAGCCGGCGGGCCCGCGAGCCGCAGAGGGCCCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000343067.9
ENST00000373797.2
ENST00000643173.1
ENST00000643604.1
ENST00000644600.1
ENST00000644780.1
ENST00000648181.1
ENST00000648891.1
ENST00000649674.1
ENST00000650265.1
CDS TCA 90 bp GGCTCGGGCCCTCTGCGGCTCGCGGGCCCGCCGGCTGCTGCTGGCTaGCTGACTAAACGCACCAGCGGAGGGAGGGAGCGAGCGAGCGAC +
Preference number: 5 (lower is better)
Translates to: GSGPLRLAGPPAAAG*LTKRTSGGRERASD
Trigger: GTCGCTCGCTCGCTCCCTCCCTCCGCTGGTGCGTTTAGTCAGTCAGCCAGCAGCAGCCGGCGGGCCCGCGAGCCGCAGAGGGCCCGAGCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000343067.9
ENST00000373797.2
ENST00000643173.1
ENST00000643604.1
ENST00000644600.1
ENST00000644780.1
ENST00000648181.1
ENST00000648891.1
ENST00000649674.1
ENST00000650265.1
CDS GCA 90 bp GATGTTGCGGTGGCTCCGGGGCCGGGCTCCTGCGCCCGCCACTGCTaGAGCCCGACGAACAATGGCAGGAGGAGGCGCCGGCGTCCGAGG +
Preference number: 5 (lower is better)
Translates to: DVAVAPGPGSCARHC*SPTNNGRRRRRRPR
Trigger: CCTCGGACGCCGGCGCCTCCTCCTGCCATTGTTCGTCGGGCTGCAGCAGTGGCGGGCGCAGGAGCCCGGCCCCGGAGCCACCGCAACATC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000343067.9
ENST00000349460.9
ENST00000373797.2
ENST00000643173.1
ENST00000643604.1
ENST00000644600.1
ENST00000644780.1
ENST00000645184.1
ENST00000648891.1
ENST00000649674.1
ENST00000650265.1
CDS GCA 90 bp TGTTGCTCACCGGTGGCTCCGGGGCCGGGCTCCTGCGCCCGCCACTaGTGCAGCCCGACGAACAATGGCAGGAGGAGGCGCCGGCGTCCG +
Preference number: 5 (lower is better)
Translates to: CCSPVAPGPGSCARH*CSPTNNGRRRRRRP
Trigger: CGGACGCCGGCGCCTCCTCCTGCCATTGTTCGTCGGGCTGCAGCAGTGGCGGGCGCAGGAGCCCGGCCCCGGAGCCACCGGTGAGCAACA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648181.1
CDS GCA 90 bp CATGATGTTGCGGTGGCTCCGGGGCCGGGCTCCTGCGCCCGCCACTaGTGCAGCCCGACGAACAATGGCAGGAGGAGGCGCCGGCGTCCG +
Preference number: 5 (lower is better)
Translates to: HDVAVAPGPGSCARH*CSPTNNGRRRRRRP
Trigger: CGGACGCCGGCGCCTCCTCCTGCCATTGTTCGTCGGGCTGCAGCAGTGGCGGGCGCAGGAGCCCGGCCCCGGAGCCACCGCAACATCATG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000343067.9
ENST00000349460.9
ENST00000373797.2
ENST00000643173.1
ENST00000643604.1
ENST00000644600.1
ENST00000644780.1
ENST00000645184.1
ENST00000648891.1
ENST00000649674.1
ENST00000650265.1
CDS-3UTR CAA 90 bp CTAGGGAGAGACGCGGAAGTCCCACTAAGCTGGCTTTGGCTTCCAACACAGCTGGAGGTTCCTGCCACTTaGCCCCGCCGGGGCCTCCAC +
Preference number: 5 (lower is better)
Translates to: LGRDAEVPLSWLWLPTQLEVPAT*PRRGLH
Trigger: GTGGAGGCCCCGGCGGGGCAAAGTGGCAGGAACCTC...CAGCTGTGTTGGAAGCCAAAGCCAGCTTAGTGGGACTTCCGCGTCTCTCCCTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642937.2
ENST00000647103.1
CDS-3UTR CAA 90 bp CGAATCGACAGCTGCTGCTCCATCGAGGCTCCGGGACGCCCGTTTACTTGCTGTGGGCTCTGGCTCAGCTaGCTCAGGTGGCTCGTCTTC +
Preference number: 5 (lower is better)
Translates to: RIDSCCSIEAPGRPFTCCGLWLS*LRWLVF
Trigger: GAAGACGAGCCACCTGAGCAAGCTGAGCCAGAGCCC...ACAGCAAGTAAACGGGCGTCCCGGAGCCTCGATGGAGCAGCAGCTGTCGATTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
CDS-3UTR CAA 90 bp GCTCTGGCTCCAGTTCCCGAGGTTTGTTGTCTCCTCACCCCCAGCTGCCAAGCAGCAACACGACCAGGCTaGGGCACTACCCCAAAGCCC +
Preference number: 5 (lower is better)
Translates to: ALAPVPEVCCLLTPSCQAATRPG*GTTPKP
Trigger: GGGCTTTGGGGTAGTGCCCAAGCCTGGTCGTGTTGC...TGCTTGGCAGCTGGGGGTGAGGAGACAACAAACCTCGGGAACTGGAGCCAGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR CAA 90 bp AGGTGCAGAAGTGGGCCGAGGACTTCGGTCTGCCGAATCGACAGCTGCTGCTCCTTGCCTGGTCTGAGCTaGAGTCCGGCCACTGTATCG +
Preference number: 5 (lower is better)
Translates to: RCRSGPRTSVCRIDSCCSLPGLS*SPATVS
Trigger: CGATACAGTGGCCGGACTCAAGCTCAGACCAGGCAA...GGAGCAGCAGCTGTCGATTCGGCAGACCGAAGTCCTCGGCCCACTTCTGCACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
CDS TCA 90 bp CTAGTGCAGACTGAGCACGTAGCAGGGGCTCAGATCACACCAGACTaGGTGGGTGGGTGCAGGCTTCTAAAGCAGCGGGACCCACTGAGC +
Preference number: 5 (lower is better)
Translates to: LVQTEHVAGAQITPD*VGGCRLLKQRDPLS
Trigger: GCTCAGTGGGTCCCGCTGCTTTAGAAGCCTGCACCCACCCACTCAGTCTGGTGTGATCTGAGCCCCTGCTACGTGCTCAGTCTGCACTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649674.1
CDS-3UTR CAA 90 bp GCATCTTTCCGAGGTCTGTGGATCAGGGCTGGTGCCCTCCCTGGCATTCTGATAGGGCTCTGGCTCAGCTaGCTCAGGTGGCTCGTCTTC +
Preference number: 5 (lower is better)
Translates to: ASFRGLWIRAGALPGILIGLWLS*LRWLVF
Trigger: GAAGACGAGCCACCTGAGCAAGCTGAGCCAGAGCCC...TATCAGAATGCCAGGGAGGGCACCAGCCCTGATCCACAGACCTCGGAAAGATGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp CTGACCCTGAGTAATGGCAGGTGCAGAAGTGGGCCGAGGACTTCGGTCTGCCGATCCAAGTCTCCACTGTaGTCGTCAGTCTGGGCAGCC +
Preference number: 5 (lower is better)
Translates to: LTLSNGRCRSGPRTSVCRSKSPL*SSVWAA
Trigger: GGCTGCCCAGACTGACGACAACAGTGGAGACTTGGA...TCGGCAGACCGAAGTCCTCGGCCCACTTCTGCACCTGCCATTACTCAGGGTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643155.1
CDS-3UTR CAA 90 bp GCTCTGGCTCCAGTTCCCGAGGTTTGTTGTCTCCTCACCCCCAGCTGCCAAGCATCCAGTTCCCGAGGTTaGTTGTCTCCTCACCCCCAG +
Preference number: 5 (lower is better)
Translates to: ALAPVPEVCCLLTPSCQASSSRG*LSPHPQ
Trigger: CTGGGGGTGAGGAGACAACAAACCTCGGGAACTGGA...TGCTTGGCAGCTGGGGGTGAGGAGACAACAAACCTCGGGAACTGGAGCCAGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR CAA 90 bp CAATGCAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAGAGGTTCCTGCCACTTaGCCCCGCCGGGGCCTCCAC +
Preference number: 5 (lower is better)
Translates to: QCRKAGFGQSIATPLYPTEVPAT*PRRGLH
Trigger: GTGGAGGCCCCGGCGGGGCAAAGTGGCAGGAACCTC...TGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTGCATTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000644342.1
ENST00000646189.1
ENST00000646800.1
CDS-3UTR CAA 90 bp GCATCTTTCCGAGGTCTGTGGATCAGGGCTGGTGCCCTCCCTGGCATTCTGATATTGCCTGGTCTGAGCTaGAGTCCGGCCACTGTATCG +
Preference number: 5 (lower is better)
Translates to: ASFRGLWIRAGALPGILILPGLS*SPATVS
Trigger: CGATACAGTGGCCGGACTCAAGCTCAGACCAGGCAA...TATCAGAATGCCAGGGAGGGCACCAGCCCTGATCCACAGACCTCGGAAAGATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp GCATCTTTCCGAGGTCTGTGGATCAGGGCTGGTGCCCTCCCTGGCATTCTGATATCCAAGTCTCCACTGTaGTCGTCAGTCTGGGCAGCC +
Preference number: 5 (lower is better)
Translates to: ASFRGLWIRAGALPGILISKSPL*SSVWAA
Trigger: GGCTGCCCAGACTGACGACAACAGTGGAGACTTGGA...TATCAGAATGCCAGGGAGGGCACCAGCCCTGATCCACAGACCTCGGAAAGATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp CTAGGGAGAGACGCGGAAGTCCCACTAAGCTGGCTTTGGCTTCCAACACAGCTGTCCAAGTCTCCACTGTaGTCGTCAGTCTGGGCAGCC +
Preference number: 5 (lower is better)
Translates to: LGRDAEVPLSWLWLPTQLSKSPL*SSVWAA
Trigger: GGCTGCCCAGACTGACGACAACAGTGGAGACTTGGA...CAGCTGTGTTGGAAGCCAAAGCCAGCTTAGTGGGACTTCCGCGTCTCTCCCTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp GCTCTGGCTCCAGTTCCCGAGGTTTGTTGTCTCCTCACCCCCAGCTGCCAAGCATGCTCCTTTGCCTCCTaGATGGCTTGTACAAGGACC +
Preference number: 5 (lower is better)
Translates to: ALAPVPEVCCLLTPSCQACSFAS*MACTRT
Trigger: GGTCCTTGTACAAGCCATCAAGGAGGCAAAGGAGCA...TGCTTGGCAGCTGGGGGTGAGGAGACAACAAACCTCGGGAACTGGAGCCAGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR CAA 90 bp GGTAGCTCTTCCTACAGGCCATCTGGCCATCAGGCAGTGGGCATGCACTACATGAGGCAAGAGAACTGCTaGAACCCAGGAGGCGGAGGT +
Preference number: 5 (lower is better)
Translates to: GSSSYRPSGHQAVGMHYMRQENC*NPGGGG
Trigger: ACCTCCGCCTCCTGGGTTCAAGCAGTTCTCTTGCCT...CATGTAGTGCATGCCCACTGCCTGATGGCCAGATGGCCTGTAGGAAGAGCTACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR CAA 90 bp GGTAGCTCTTCCTACAGGCCATCTGGCCATCAGGCAGTGGGCATGCACTACATGCAGGCAGTGGAGACTTaGGACGGTGTTGGGAGAAGC +
Preference number: 5 (lower is better)
Translates to: GSSSYRPSGHQAVGMHYMQAVET*DGVGRS
Trigger: GCTTCTCCCAACACCGTCCAAAGTCTCCACTGCCTG...CATGTAGTGCATGCCCACTGCCTGATGGCCAGATGGCCTGTAGGAAGAGCTACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR CAA 90 bp CTAGGGAGAGACGCGGAAGTCCCACTAAGCTGGCTTTGGCTTCCAACACAGCTGCAGGCAGTGGAGACTTaGGACGGTGTTGGGAGAAGC +
Preference number: 5 (lower is better)
Translates to: LGRDAEVPLSWLWLPTQLQAVET*DGVGRS
Trigger: GCTTCTCCCAACACCGTCCAAAGTCTCCACTGCCTG...CAGCTGTGTTGGAAGCCAAAGCCAGCTTAGTGGGACTTCCGCGTCTCTCCCTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp GCATCTTTCCGAGGTCTGTGGATCAGGGCTGGTGCCCTCCCTGGCATTCTGATATCCAGTTCCCGAGGTTaGTTGTCTCCTCACCCCCAG +
Preference number: 5 (lower is better)
Translates to: ASFRGLWIRAGALPGILISSSRG*LSPHPQ
Trigger: CTGGGGGTGAGGAGACAACAAACCTCGGGAACTGGA...TATCAGAATGCCAGGGAGGGCACCAGCCCTGATCCACAGACCTCGGAAAGATGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR CAA 90 bp GGGCTCTTTCCCTCCCTCCTGTTGTTCATGTCTCACATGGGTACCAAAAGAAAAGAGGTTCCTGCCACTTaGCCCCGCCGGGGCCTCCAC +
Preference number: 5 (lower is better)
Translates to: GLFPSLLLFMSHMGTKRKEVPAT*PRRGLH
Trigger: GTGGAGGCCCCGGCGGGGCAAAGTGGCAGGAACCTC...TTTTCTTTTGGTACCCATGTGAGACATGAACAACAGGAGGGAGGGAAAGAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000642937.2
ENST00000647103.1
CDS-3UTR CAA 90 bp GCAGGTGCAGAAGTGGGCCGAGGACTTCGGTCTGCCGAATCGACAGCTGCTGCTGTCCGCTCCTTGTTCTaGGTCAAGTCTTCATGTGTA +
Preference number: 5 (lower is better)
Translates to: AGAEVGRGLRSAESTAAAVRSLF*VKSSCV
Trigger: TACACATGAAGACTTGACCAAGAACAAGGAGCGGAC...AGCAGCAGCTGTCGATTCGGCAGACCGAAGTCCTCGGCCCACTTCTGCACCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
CDS-3UTR CAA 90 bp CGAATCGACAGCTGCTGCTCCATCGAGGCTCCGGGACGCCCGTTTACTTGCTGTTCTGACTCTACTTCTTaGCCTTCTTCCTCGGACACC +
Preference number: 5 (lower is better)
Translates to: RIDSCCSIEAPGRPFTCCSDSTS*PSSSDT
Trigger: GGTGTCCGAGGAAGAAGGCAAAGAAGTAGAGTCAGA...ACAGCAAGTAAACGGGCGTCCCGGAGCCTCGATGGAGCAGCAGCTGTCGATTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
CDS-3UTR CAA 90 bp AGGACTTCGGTCTGCCGAATCGACAGCTGCTGCTCCATCGAGGCTCCGGGACGCTCTCCAGGCCGAATCTaGATGAAAAAGCTACTACGT +
Preference number: 5 (lower is better)
Translates to: RTSVCRIDSCCSIEAPGRSPGRI*MKKLLR
Trigger: ACGTAGTAGCTTTTTCATCAAGATTCGGCCTGGAGA...GCGTCCCGGAGCCTCGATGGAGCAGCAGCTGTCGATTCGGCAGACCGAAGTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
CDS-3UTR CAA 90 bp TGGGCCGAGGACTTCGGTCTGCCGAATCGACAGCTGCTGCTCCATCGAGGCTCCCCTAGCGCAAGAAATTaGCTTTTGGGAATGGTGTCT +
Preference number: 5 (lower is better)
Translates to: WAEDFGLPNRQLLLHRGSPSARN*LLGMVS
Trigger: AGACACCATTCCCAAAAGCAAATTTCTTGCGCTAGG...GGAGCCTCGATGGAGCAGCAGCTGTCGATTCGGCAGACCGAAGTCCTCGGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
CDS-3UTR CAA 90 bp CGAATCGACAGCTGCTGCTCCATCGAGGCTCCGGGACGCCCGTTTACTTGCTGTTTTTGCTGGTTTCTCTaGGATGGGAGAAGGGCAGAG +
Preference number: 5 (lower is better)
Translates to: RIDSCCSIEAPGRPFTCCFCWFL*DGRRAE
Trigger: CTCTGCCCTTCTCCCATCCAAGAGAAACCAGCAAAA...ACAGCAAGTAAACGGGCGTCCCGGAGCCTCGATGGAGCAGCAGCTGTCGATTCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643155.1
CDS-3UTR CAA 90 bp GCTCTGGCTCCAGTTCCCGAGGTTTGTTGTCTCCTCACCCCCAGCTGCCAAGCACCCTGTCAGTGTCTGTaGGGGTTGGAAATAAATGGG +
Preference number: 5 (lower is better)
Translates to: ALAPVPEVCCLLTPSCQAPCQCL*GLEING
Trigger: CCCATTTATTTCCAACCCCAACAGACACTGACAGGG...TGCTTGGCAGCTGGGGGTGAGGAGACAACAAACCTCGGGAACTGGAGCCAGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR CAA 90 bp GCATCTTTCCGAGGTCTGTGGATCAGGGCTGGTGCCCTCCCTGGCATTCTGATACCCACTAAGCTGGCTTaGGCTTCCAACACAGCTGAC +
Preference number: 5 (lower is better)
Translates to: ASFRGLWIRAGALPGILIPTKLA*ASNTAD
Trigger: GTCAGCTGTGTTGGAAGCCAAAGCCAGCTTAGTGGG...TATCAGAATGCCAGGGAGGGCACCAGCCCTGATCCACAGACCTCGGAAAGATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp GCTCTGGCTCCAGTTCCCGAGGTTTGTTGTCTCCTCACCCCCAGCTGCCAAGCAAGACTTTGGACGGTGTaGGGAGAAGCAGCTTTAGAC +
Preference number: 5 (lower is better)
Translates to: ALAPVPEVCCLLTPSCQARLWTV*GEAALD
Trigger: GTCTAAAGCTGCTTCTCCCAACACCGTCCAAAGTCT...TGCTTGGCAGCTGGGGGTGAGGAGACAACAAACCTCGGGAACTGGAGCCAGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR CAA 90 bp AAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAATACATACTGAGGTTCCTGCCACTTaGCCCCGCCGGGGCCTCCAC +
Preference number: 5 (lower is better)
Translates to: KAGFGQSIATPLYPTIHTEVPAT*PRRGLH
Trigger: GTGGAGGCCCCGGCGGGGCAAAGTGGCAGGAACCTC...AGTATGTATTGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000644342.1
ENST00000646189.1
ENST00000646800.1
CDS-3UTR CAA 90 bp GCCCAGGCTGGTCTTAAACTACTGGACTCAAGTGATCTGCCTGTCTTGGCCTCCTGGCTCACTGCAGCCTaGGTCTCCTGGCTCAAGCAA +
Preference number: 5 (lower is better)
Translates to: AQAGLKLLDSSDLPVLASWLTAA*VSWLKQ
Trigger: TTGCTTGAGCCAGGAGACCAAGGCTGCAGTGAGCCA...GGAGGCCAAGACAGGCAGATCACTTGAGTCCAGTAGTTTAAGACCAGCCTGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645184.1
CDS-3UTR CAA 90 bp GCTGCTCCATCGAGGCTCCGGGACGCCCGTTTACTTGCTGTACGCTCGAAGTGTGTCCGCTCCTTGTTCTaGGTCAAGTCTTCATGTGTA +
Preference number: 5 (lower is better)
Translates to: AAPSRLRDARLLAVRSKCVRSLF*VKSSCV
Trigger: TACACATGAAGACTTGACCAAGAACAAGGAGCGGAC...ACACTTCGAGCGTACAGCAAGTAAACGGGCGTCCCGGAGCCTCGATGGAGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
CDS-3UTR CAA 90 bp GCTCTGGCTCCAGTTCCCGAGGTTTGTTGTCTCCTCACCCCCAGCTGCCAAGCATCTGATGTCCGCTCCTaGTTCTTGGTCAAGTCTTCA +
Preference number: 5 (lower is better)
Translates to: ALAPVPEVCCLLTPSCQASDVRS*FLVKSS
Trigger: TGAAGACTTGACCAAGAACAAGGAGCGGACATCAGA...TGCTTGGCAGCTGGGGGTGAGGAGACAACAAACCTCGGGAACTGGAGCCAGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR CAA 90 bp GCTCTGGCTCCAGTTCCCGAGGTTTGTTGTCTCCTCACCCCCAGCTGCCAAGCAAAAGATGGGTCTGTTTaGAGTTCCGGTTCAGGAGCT +
Preference number: 5 (lower is better)
Translates to: ALAPVPEVCCLLTPSCQAKDGSV*SSGSGA
Trigger: AGCTCCTGAACCGGAACTCAAAACAGACCCATCTTT...TGCTTGGCAGCTGGGGGTGAGGAGACAACAAACCTCGGGAACTGGAGCCAGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR CAA 90 bp GCTGCTCCATCGAGGCTCCGGGACGCCCGTTTACTTGCTGTACGCTCGAAGTGTAAAGATGGGTCTGTTTaGAGTTCCGGTTCAGGAGCT +
Preference number: 5 (lower is better)
Translates to: AAPSRLRDARLLAVRSKCKDGSV*SSGSGA
Trigger: AGCTCCTGAACCGGAACTCAAAACAGACCCATCTTT...ACACTTCGAGCGTACAGCAAGTAAACGGGCGTCCCGGAGCCTCGATGGAGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
CDS-3UTR CAA 90 bp AGTGGGCCGAGGACTTCGGTCTGCCGAATCGACAGCTGCTGCTCCATCGAGGCTTCCAACAAAGAAACCTaGCAGTGCATGTTCCTGTGT +
Preference number: 5 (lower is better)
Translates to: SGPRTSVCRIDSCCSIEASNKET*QCMFLC
Trigger: ACACAGGAACATGCACTGCAAGGTTTCTTTGTTGGA...AGCCTCGATGGAGCAGCAGCTGTCGATTCGGCAGACCGAAGTCCTCGGCCCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
CDS-3UTR CAA 90 bp AGGTGCAGAAGTGGGCCGAGGACTTCGGTCTGCCGAATCGACAGCTGCTGCTCCCCTAGCGCAAGAAATTaGCTTTTGGGAATGGTGTCT +
Preference number: 5 (lower is better)
Translates to: RCRSGPRTSVCRIDSCCSPSARN*LLGMVS
Trigger: AGACACCATTCCCAAAAGCAAATTTCTTGCGCTAGG...GGAGCAGCAGCTGTCGATTCGGCAGACCGAAGTCCTCGGCCCACTTCTGCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
CDS-3UTR CAA 90 bp GCTCAGCTTGCTCAGGTGGCTCGTCTTCCTTTTTCACTTCAGCCTTCACTGTTTGGGCTCTGGCTCAGCTaGCTCAGGTGGCTCGTCTTC +
Preference number: 5 (lower is better)
Translates to: AQLAQVARLPFSLQPSLFGLWLS*LRWLVF
Trigger: GAAGACGAGCCACCTGAGCAAGCTGAGCCAGAGCCC...AAACAGTGAAGGCTGAAGTGAAAAAGGAAGACGAGCCACCTGAGCAAGCTGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
CDS-3UTR CAA 90 bp CCCTTGTCATGTGGTGTCTTGTGGGGAGAACGGCTCCTAAAAGTCAATTCCTTGGGGCTCTGGCTCAGCTaGCTCAGGTGGCTCGTCTTC +
Preference number: 5 (lower is better)
Translates to: PLSCGVLWGERLLKVNSLGLWLS*LRWLVF
Trigger: GAAGACGAGCCACCTGAGCAAGCTGAGCCAGAGCCC...CAAGGAATTGACTTTTAGGAGCCGTTCTCCCCACAAGACACCACATGACAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp TCGACAGCTGCTGCTCCATCGAGGCTCCGGGACGCCCGTTTACTTGCTGTACGCTTCTCCTGTGGGGATTaGCCCATTGATGTTAAGAGT +
Preference number: 5 (lower is better)
Translates to: STAAAPSRLRDARLLAVRFSCGD*PIDVKS
Trigger: ACTCTTAACATCAATGGGCAAATCCCCACAGGAGAA...GCGTACAGCAAGTAAACGGGCGTCCCGGAGCCTCGATGGAGCAGCAGCTGTCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
CDS-3UTR CAA 90 bp GCAGGTGCAGAAGTGGGCCGAGGACTTCGGTCTGCCGAATCGACAGCTGCTGCTTTCTCCTGTGGGGATTaGCCCATTGATGTTAAGAGT +
Preference number: 5 (lower is better)
Translates to: AGAEVGRGLRSAESTAAAFSCGD*PIDVKS
Trigger: ACTCTTAACATCAATGGGCAAATCCCCACAGGAGAA...AGCAGCAGCTGTCGATTCGGCAGACCGAAGTCCTCGGCCCACTTCTGCACCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
CDS-3UTR CAA 90 bp GCATCTTTCCGAGGTCTGTGGATCAGGGCTGGTGCCCTCCCTGGCATTCTGATATGCTCCTTTGCCTCCTaGATGGCTTGTACAAGGACC +
Preference number: 5 (lower is better)
Translates to: ASFRGLWIRAGALPGILICSFAS*MACTRT
Trigger: GGTCCTTGTACAAGCCATCAAGGAGGCAAAGGAGCA...TATCAGAATGCCAGGGAGGGCACCAGCCCTGATCCACAGACCTCGGAAAGATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp GCATCTTTCCGAGGTCTGTGGATCAGGGCTGGTGCCCTCCCTGGCATTCTGATATGGGGCTTATACCCCTaGTCATGTGGTGTCTTGTGG +
Preference number: 5 (lower is better)
Translates to: ASFRGLWIRAGALPGILIWGLYP*SCGVLW
Trigger: CCACAAGACACCACATGACAAGGGGTATAAGCCCCA...TATCAGAATGCCAGGGAGGGCACCAGCCCTGATCCACAGACCTCGGAAAGATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp TCCAAAGGGGATAAGACTAGGGAGAGACGCGGAAGTCCCACTAAGCTGGCTTTGAGGCAAGAGAACTGCTaGAACCCAGGAGGCGGAGGT +
Preference number: 5 (lower is better)
Translates to: SKGDKTRERRGSPTKLALRQENC*NPGGGG
Trigger: ACCTCCGCCTCCTGGGTTCAAGCAGTTCTCTTGCCT...CAAAGCCAGCTTAGTGGGACTTCCGCGTCTCTCCCTAGTCTTATCCCCTTTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp GCATCTTTCCGAGGTCTGTGGATCAGGGCTGGTGCCCTCCCTGGCATTCTGATAGGAAGGACACCCATCTaGCTGGGCTTGTCCAAATCT +
Preference number: 5 (lower is better)
Translates to: ASFRGLWIRAGALPGILIGRTPI*LGLSKS
Trigger: AGATTTGGACAAGCCCAGCAAGATGGGTGTCCTTCC...TATCAGAATGCCAGGGAGGGCACCAGCCCTGATCCACAGACCTCGGAAAGATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR CAA 90 bp GGTAGCTCTTCCTACAGGCCATCTGGCCATCAGGCAGTGGGCATGCACTACATGAATACAGGTCTTGCTTaGTGGGTGGGTGCCAGAGTC +
Preference number: 5 (lower is better)
Translates to: GSSSYRPSGHQAVGMHYMNTGLA*WVGARV
Trigger: GACTCTGGCACCCACCCACAAAGCAAGACCTGTATT...CATGTAGTGCATGCCCACTGCCTGATGGCCAGATGGCCTGTAGGAAGAGCTACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR CAA 90 bp TCCAAAGGGGATAAGACTAGGGAGAGACGCGGAAGTCCCACTAAGCTGGCTTTGTCCAGTTCCCGAGGTTaGTTGTCTCCTCACCCCCAG +
Preference number: 5 (lower is better)
Translates to: SKGDKTRERRGSPTKLALSSSRG*LSPHPQ
Trigger: CTGGGGGTGAGGAGACAACAAACCTCGGGAACTGGA...CAAAGCCAGCTTAGTGGGACTTCCGCGTCTCTCCCTAGTCTTATCCCCTTTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR CAA 90 bp TTTGAGCTGTCAGCAAGACTCCTGGGTCCAAGTCTCCACTGTTGTCGTCAGTCTTCTGTTGTCATGATGTaGCTGGGCTGGGTGCGGCGG +
Preference number: 5 (lower is better)
Translates to: FELSARLLGPSLHCCRQSSVVMM*LGWVRR
Trigger: CCGCCGCACCCAGCCCAGCAACATCATGACAACAGA...AGACTGACGACAACAGTGGAGACTTGGACCCAGGAGTCTTGCTGACAGCTCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643155.1
CDS GCA 90 bp GACTCCGACGAGGTGGTCATCTGGCTTTTACTAGGAACTACCGAATaGTTGGGACCCTCCCATTCAGAGTCAGGGTTAGTAGATGGCCCC +
Preference number: 5 (lower is better)
Translates to: DSDEVVIWLLLGTTE*LGPSHSESGLVDGP
Trigger: GGGGCCATCTACTAACCCTGACTCTGAATGGGAGGGTCCCAAGCATTCGGTAGTTCCTAGTAAAAGCCAGATGACCACCTCGTCGGAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646871.1
CDS GCA 90 bp TTCACCAGGGGAGGCTTCCATGCTTCTGTGGGCTCTGGCTCAGCTTaGTCAGGTGGCTCGTCTTCCTTTTTCACTTCAGCCTTCACTGTT +
Preference number: 5 (lower is better)
Translates to: FTRGGFHASVGSGSA*SGGSSSFFTSAFTV
Trigger: AACAGTGAAGGCTGAAGTGAAAAAGGAAGACGAGCCACCTGAGCAAGCTGAGCCAGAGCCCACAGAAGCATGGAAGCCTCCCCTGGTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649717.1
CDS CCA 90 bp ACTGGCCTGTTCCTCCACTCCTATACATCCCCCAGTTGGGCCTCTTaGCATCTCCTTAATATCAAGATAGCCAGCTGCCCCCTCCTCCTT +
Preference number: 5 (lower is better)
Translates to: TGLFLHSYTSPSWAS*HLLNIKIASCPLLL
Trigger: AAGGAGGAGGGGGCAGCTGGCTATCTTGATATTAAGGAGATGCCAAGAGGCCCAACTGGGGGATGTATAGGAGTGGAGGAACAGGCCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000460378.1
ENST00000646871.1
CDS CCA 90 bp TACCGAATGCTTGGGACCCTCCCATTCAGAGTCAGGGTTAGTAGATaGCCCCTTTGTCACGACAGCCACCTCCTCTGTGCGAATGCCATT +
Preference number: 5 (lower is better)
Translates to: YRMLGTLPFRVRVSR*PLCHDSHLLCANAI
Trigger: AATGGCATTCGCACAGAGGAGGTGGCTGTCGTGACAAAGGGGCCATCTACTAACCCTGACTCTGAATGGGAGGGTCCCAAGCATTCGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646871.1
CDS-3UTR CAA 90 bp GGTAGCTCTTCCTACAGGCCATCTGGCCATCAGGCAGTGGGCATGCACTACATGTCCTTCAGCTGCTGTTaGACAAGATTCCTCCTGCTG +
Preference number: 5 (lower is better)
Translates to: GSSSYRPSGHQAVGMHYMSFSCC*TRFLLL
Trigger: CAGCAGGAGGAATCTTGTCAAACAGCAGCTGAAGGA...CATGTAGTGCATGCCCACTGCCTGATGGCCAGATGGCCTGTAGGAAGAGCTACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR CAA 90 bp CTAGGGAGAGACGCGGAAGTCCCACTAAGCTGGCTTTGGCTTCCAACACAGCTGTCTGACTCTACTTCTTaGCCTTCTTCCTCGGACACC +
Preference number: 5 (lower is better)
Translates to: LGRDAEVPLSWLWLPTQLSDSTS*PSSSDT
Trigger: GGTGTCCGAGGAAGAAGGCAAAGAAGTAGAGTCAGA...CAGCTGTGTTGGAAGCCAAAGCCAGCTTAGTGGGACTTCCGCGTCTCTCCCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp AGGACTTCGGTCTGCCGAATCGACAGCTGCTGCTCCATCGAGGCTCCGGGACGCTCGTTTAAGCAAATCTaGTCCCTTAGCATGTTTCTC +
Preference number: 5 (lower is better)
Translates to: RTSVCRIDSCCSIEAPGRSFKQI*SLSMFL
Trigger: GAGAAACATGCTAAGGGACAAGATTTGCTTAAACGA...GCGTCCCGGAGCCTCGATGGAGCAGCAGCTGTCGATTCGGCAGACCGAAGTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
CDS-3UTR CAA 90 bp GCAGGTGCAGAAGTGGGCCGAGGACTTCGGTCTGCCGAATCGACAGCTGCTGCTCTCCTTCCAAGTCCTTaGCTTTATGAAGATCAACTC +
Preference number: 5 (lower is better)
Translates to: AGAEVGRGLRSAESTAAALLPSP*LYEDQL
Trigger: GAGTTGATCTTCATAAAGCAAAGGACTTGGAAGGAG...AGCAGCAGCTGTCGATTCGGCAGACCGAAGTCCTCGGCCCACTTCTGCACCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643155.1
ENST00000648891.1
CDS-3UTR CAA 90 bp AGCTGCTGCTCCATCGAGGCTCCGGGACGCCCGTTTACTTGCTGTACGCTCGAATCTCCAGGCCGAATCTaGATGAAAAAGCTACTACGT +
Preference number: 5 (lower is better)
Translates to: SCCSIEAPGRPFTCCTLESPGRI*MKKLLR
Trigger: ACGTAGTAGCTTTTTCATCAAGATTCGGCCTGGAGA...TTCGAGCGTACAGCAAGTAAACGGGCGTCCCGGAGCCTCGATGGAGCAGCAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
CDS-3UTR CAA 90 bp GCTCTGGCTCCAGTTCCCGAGGTTTGTTGTCTCCTCACCCCCAGCTGCCAAGCACCTAGCGCAAGAAATTaGCTTTTGGGAATGGTGTCT +
Preference number: 5 (lower is better)
Translates to: ALAPVPEVCCLLTPSCQAPSARN*LLGMVS
Trigger: AGACACCATTCCCAAAAGCAAATTTCTTGCGCTAGG...TGCTTGGCAGCTGGGGGTGAGGAGACAACAAACCTCGGGAACTGGAGCCAGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR CAA 90 bp GTTGGGAGAAGCAGCTTTAGACATTTCTCTTGCTCACTGCCCTTGAGCCCCAGTTTGCCTGGTCTGAGCTaGAGTCCGGCCACTGTATCG +
Preference number: 5 (lower is better)
Translates to: VGRSSFRHFSCSLPLSPSLPGLS*SPATVS
Trigger: CGATACAGTGGCCGGACTCAAGCTCAGACCAGGCAA...ACTGGGGCTCAAGGGCAGTGAGCAAGAGAAATGTCTAAAGCTGCTTCTCCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp GGCTCAGCTTGCTCAGGTGGCTCGTCTTCCTTTTTCACTTCAGCCTTCACTGTTTTGCCTGGTCTGAGCTaGAGTCCGGCCACTGTATCG +
Preference number: 5 (lower is better)
Translates to: GSACSGGSSSFFTSAFTVLPGLS*SPATVS
Trigger: CGATACAGTGGCCGGACTCAAGCTCAGACCAGGCAA...AACAGTGAAGGCTGAAGTGAAAAAGGAAGACGAGCCACCTGAGCAAGCTGAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
CDS-3UTR CAA 90 bp CAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAATACAGGGCTCTGGCTCAGCTaGCTCAGGTGGCTCGTCTTC +
Preference number: 5 (lower is better)
Translates to: QKSWLWAVHCYSFVPHNTGLWLS*LRWLVF
Trigger: GAAGACGAGCCACCTGAGCAAGCTGAGCCAGAGCCC...TGTATTGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp GGTAGCTCTTCCTACAGGCCATCTGGCCATCAGGCAGTGGGCATGCACTACATGGTGTTTGGTCACCATTaGAGGTGGGTACTGTCACCT +
Preference number: 5 (lower is better)
Translates to: GSSSYRPSGHQAVGMHYMVFGHH*RWVLSP
Trigger: AGGTGACAGTACCCACCTCAAATGGTGACCAAACAC...CATGTAGTGCATGCCCACTGCCTGATGGCCAGATGGCCTGTAGGAAGAGCTACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
CDS-3UTR CAA 90 bp CTGAGTAATGGCAGGTGCAGAAGTGGGCCGAGGACTTCGGTCTGCCGAATCGACGTGGGGATTTGCCCATaGATGTTAAGAGTTCGGAAG +
Preference number: 5 (lower is better)
Translates to: LSNGRCRSGPRTSVCRIDVGICP*MLRVRK
Trigger: CTTCCGAACTCTTAACATCAATGGGCAAATCCCCAC...GTCGATTCGGCAGACCGAAGTCCTCGGCCCACTTCTGCACCTGCCATTACTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
CDS-3UTR CAA 90 bp GCTCTGGCTCCAGTTCCCGAGGTTTGTTGTCTCCTCACCCCCAGCTGCCAAGCATTCTCCTGTGGGGATTaGCCCATTGATGTTAAGAGT +
Preference number: 5 (lower is better)
Translates to: ALAPVPEVCCLLTPSCQAFSCGD*PIDVKS
Trigger: ACTCTTAACATCAATGGGCAAATCCCCACAGGAGAA...TGCTTGGCAGCTGGGGGTGAGGAGACAACAAACCTCGGGAACTGGAGCCAGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR CAA 90 bp TCGACAGCTGCTGCTCCATCGAGGCTCCGGGACGCCCGTTTACTTGCTGTACGCTCACTTTTCACAGCATaGGCATTATCTGAGATGGTG +
Preference number: 5 (lower is better)
Translates to: STAAAPSRLRDARLLAVRSLFTA*ALSEMV
Trigger: CACCATCTCAGATAATGCCAATGCTGTGAAAAGTGA...GCGTACAGCAAGTAAACGGGCGTCCCGGAGCCTCGATGGAGCAGCAGCTGTCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643155.1
CDS-3UTR CAA 90 bp GTTGGGAGAAGCAGCTTTAGACATTTCTCTTGCTCACTGCCCTTGAGCCCCAGTTCCAAGTCTCCACTGTaGTCGTCAGTCTGGGCAGCC +
Preference number: 5 (lower is better)
Translates to: VGRSSFRHFSCSLPLSPSSKSPL*SSVWAA
Trigger: GGCTGCCCAGACTGACGACAACAGTGGAGACTTGGA...ACTGGGGCTCAAGGGCAGTGAGCAAGAGAAATGTCTAAAGCTGCTTCTCCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp CTAGGGAGAGACGCGGAAGTCCCACTAAGCTGGCTTTGGCTTCCAACACAGCTGTTTTGCTGGTTTCTCTaGGATGGGAGAAGGGCAGAG +
Preference number: 5 (lower is better)
Translates to: LGRDAEVPLSWLWLPTQLFCWFL*DGRRAE
Trigger: CTCTGCCCTTCTCCCATCCAAGAGAAACCAGCAAAA...CAGCTGTGTTGGAAGCCAAAGCCAGCTTAGTGGGACTTCCGCGTCTCTCCCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp GTTGGGAGAAGCAGCTTTAGACATTTCTCTTGCTCACTGCCCTTGAGCCCCAGTAGGCAAGAGAACTGCTaGAACCCAGGAGGCGGAGGT +
Preference number: 5 (lower is better)
Translates to: VGRSSFRHFSCSLPLSPSRQENC*NPGGGG
Trigger: ACCTCCGCCTCCTGGGTTCAAGCAGTTCTCTTGCCT...ACTGGGGCTCAAGGGCAGTGAGCAAGAGAAATGTCTAAAGCTGCTTCTCCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp CTAGGGAGAGACGCGGAAGTCCCACTAAGCTGGCTTTGGCTTCCAACACAGCTGTTTCCCTCCCTCCTGTaGTTCATGTCTCACATGGGT +
Preference number: 5 (lower is better)
Translates to: LGRDAEVPLSWLWLPTQLFPSLL*FMSHMG
Trigger: ACCCATGTGAGACATGAACAACAGGAGGGAGGGAAA...CAGCTGTGTTGGAAGCCAAAGCCAGCTTAGTGGGACTTCCGCGTCTCTCCCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp GGGCTCTTTCCCTCCCTCCTGTTGTTCATGTCTCACATGGGTACCAAAAGAAAAGCAACACGACCAGGCTaGGGCACTACCCCAAAGCCC +
Preference number: 5 (lower is better)
Translates to: GLFPSLLLFMSHMGTKRKATRPG*GTTPKP
Trigger: GGGCTTTGGGGTAGTGCCCAAGCCTGGTCGTGTTGC...TTTTCTTTTGGTACCCATGTGAGACATGAACAACAGGAGGGAGGGAAAGAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp GTTGGGAGAAGCAGCTTTAGACATTTCTCTTGCTCACTGCCCTTGAGCCCCAGTAGTTCCCGAGGTTTGTaGTCTCCTCACCCCCAGCTG +
Preference number: 5 (lower is better)
Translates to: VGRSSFRHFSCSLPLSPSSSRGL*SPHPQL
Trigger: CAGCTGGGGGTGAGGAGACAACAAACCTCGGGAACT...ACTGGGGCTCAAGGGCAGTGAGCAAGAGAAATGTCTAAAGCTGCTTCTCCCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR CAA 90 bp CTCTGGCTCAGCTTGCTCAGGTGGCTCGTCTTCCTTTTTCACTTCAGCCTTCACACTTTCATACTGCTCTaGCTGCCAGGCACGGTGGCT +
Preference number: 5 (lower is better)
Translates to: LWLSLLRWLVFLFHFSLHTFILL*LPGTVA
Trigger: AGCCACCGTGCCTGGCAGCAAGAGCAGTATGAAAGT...GTGAAGGCTGAAGTGAAAAAGGAAGACGAGCCACCTGAGCAAGCTGAGCCAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648891.1
CDS-3UTR CAA 90 bp CTAGGGAGAGACGCGGAAGTCCCACTAAGCTGGCTTTGGCTTCCAACACAGCTGGTCCGCTCCTTGTTCTaGGTCAAGTCTTCATGTGTA +
Preference number: 5 (lower is better)
Translates to: LGRDAEVPLSWLWLPTQLVRSLF*VKSSCV
Trigger: TACACATGAAGACTTGACCAAGAACAAGGAGCGGAC...CAGCTGTGTTGGAAGCCAAAGCCAGCTTAGTGGGACTTCCGCGTCTCTCCCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp CAGAAGTGGGCCGAGGACTTCGGTCTGCCGAATCGACAGCTGCTGCTCCATCGACTCCTTCCAAGTCCTTaGCTTTATGAAGATCAACTC +
Preference number: 5 (lower is better)
Translates to: QKWAEDFGLPNRQLLLHRLLPSP*LYEDQL
Trigger: GAGTTGATCTTCATAAAGCAAAGGACTTGGAAGGAG...TCGATGGAGCAGCAGCTGTCGATTCGGCAGACCGAAGTCCTCGGCCCACTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643155.1
ENST00000648891.1
CDS-3UTR CAA 90 bp GCATCTTTCCGAGGTCTGTGGATCAGGGCTGGTGCCCTCCCTGGCATTCTGATAACTTTCATACTGCTCTaGCTCTCCAGGCCGAATCTT +
Preference number: 5 (lower is better)
Translates to: ASFRGLWIRAGALPGILITFILL*LSRPNL
Trigger: AAGATTCGGCCTGGAGAGCAAGAGCAGTATGAAAGT...TATCAGAATGCCAGGGAGGGCACCAGCCCTGATCCACAGACCTCGGAAAGATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp GCAGGTGCAGAAGTGGGCCGAGGACTTCGGTCTGCCGAATCGACAGCTGCTGCTGCAAGAAATTTGCTTTaGGGAATGGTGTCTGTAGAT +
Preference number: 5 (lower is better)
Translates to: AGAEVGRGLRSAESTAAAARNLL*GMVSVD
Trigger: ATCTACAGACACCATTCCCAAAAGCAAATTTCTTGC...AGCAGCAGCTGTCGATTCGGCAGACCGAAGTCCTCGGCCCACTTCTGCACCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
CDS-3UTR CAA 90 bp GCTCTGGCTCCAGTTCCCGAGGTTTGTTGTCTCCTCACCCCCAGCTGCCAAGCACCACTGTATCGAAATTaGGATCCTAGCGCAAGAAAT +
Preference number: 5 (lower is better)
Translates to: ALAPVPEVCCLLTPSCQAPLYRN*DPSARN
Trigger: ATTTCTTGCGCTAGGATCCAAATTTCGATACAGTGG...TGCTTGGCAGCTGGGGGTGAGGAGACAACAAACCTCGGGAACTGGAGCCAGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR CAA 90 bp CGAATCGACAGCTGCTGCTCCATCGAGGCTCCGGGACGCCCGTTTACTTGCTGTCCACTGTATCGAAATTaGGATCCTAGCGCAAGAAAT +
Preference number: 5 (lower is better)
Translates to: RIDSCCSIEAPGRPFTCCPLYRN*DPSARN
Trigger: ATTTCTTGCGCTAGGATCCAAATTTCGATACAGTGG...ACAGCAAGTAAACGGGCGTCCCGGAGCCTCGATGGAGCAGCAGCTGTCGATTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
CDS-3UTR CAA 90 bp GCCACATTCCTTGTCATTTGGGATGAAAGAAAGGCCCAGGATCAGACAGAAGTAGGGCTCTGGCTCAGCTaGCTCAGGTGGCTCGTCTTC +
Preference number: 5 (lower is better)
Translates to: ATFLVIWDERKAQDQTEVGLWLS*LRWLVF
Trigger: GAAGACGAGCCACCTGAGCAAGCTGAGCCAGAGCCC...TACTTCTGTCTGATCCTGGGCCTTTCTTTCATCCCAAATGACAAGGAATGTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp AAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAATACATACTGGGCTCTGGCTCAGCTaGCTCAGGTGGCTCGTCTTC +
Preference number: 5 (lower is better)
Translates to: KAGFGQSIATPLYPTIHTGLWLS*LRWLVF
Trigger: GAAGACGAGCCACCTGAGCAAGCTGAGCCAGAGCCC...AGTATGTATTGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp TCAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTCCTATAATTGCACTGGGGGGCTCTGGCTCAGCTaGCTCAGGTGGCTCGTCTTC +
Preference number: 5 (lower is better)
Translates to: SEANHLLVAPNSSYNCTGGLWLS*LRWLVF
Trigger: GAAGACGAGCCACCTGAGCAAGCTGAGCCAGAGCCC...CCCAGTGCAATTATAGGAGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTGA
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648181.1
ENST00000648891.1
CDS-3UTR CAA 90 bp CAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTCCTATAATTGCACTGGGTGGGCTCTGGCTCAGCTaGCTCAGGTGGCTCGTCTTC +
Preference number: 5 (lower is better)
Translates to: QRLIIYWWLQIAPIIALGGLWLS*LRWLVF
Trigger: GAAGACGAGCCACCTGAGCAAGCTGAGCCAGAGCCC...ACCCAGTGCAATTATAGGAGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648181.1
ENST00000648891.1
CDS-3UTR CAA 90 bp GCTCTGGCTCCAGTTCCCGAGGTTTGTTGTCTCCTCACCCCCAGCTGCCAAGCATCACTTTTCACAGCATaGGCATTATCTGAGATGGTG +
Preference number: 5 (lower is better)
Translates to: ALAPVPEVCCLLTPSCQASLFTA*ALSEMV
Trigger: CACCATCTCAGATAATGCCAATGCTGTGAAAAGTGA...TGCTTGGCAGCTGGGGGTGAGGAGACAACAAACCTCGGGAACTGGAGCCAGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR CAA 90 bp GGTAGCTCTTCCTACAGGCCATCTGGCCATCAGGCAGTGGGCATGCACTACATGCTCAGATGTGATAGTTaGAGCTGTCAGCAAGACTCC +
Preference number: 5 (lower is better)
Translates to: GSSSYRPSGHQAVGMHYMLRCDS*SCQQDS
Trigger: GGAGTCTTGCTGACAGCTCAAACTATCACATCTGAG...CATGTAGTGCATGCCCACTGCCTGATGGCCAGATGGCCTGTAGGAAGAGCTACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR CAA 90 bp GCATCTTTCCGAGGTCTGTGGATCAGGGCTGGTGCCCTCCCTGGCATTCTGATACTCAGATGTGATAGTTaGAGCTGTCAGCAAGACTCC +
Preference number: 5 (lower is better)
Translates to: ASFRGLWIRAGALPGILILRCDS*SCQQDS
Trigger: GGAGTCTTGCTGACAGCTCAAACTATCACATCTGAG...TATCAGAATGCCAGGGAGGGCACCAGCCCTGATCCACAGACCTCGGAAAGATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp CTCTGGCTCAGCTTGCTCAGGTGGCTCGTCTTCCTTTTTCACTTCAGCCTTCACTGCTCCTTTGCCTCCTaGATGGCTTGTACAAGGACC +
Preference number: 5 (lower is better)
Translates to: LWLSLLRWLVFLFHFSLHCSFAS*MACTRT
Trigger: GGTCCTTGTACAAGCCATCAAGGAGGCAAAGGAGCA...GTGAAGGCTGAAGTGAAAAAGGAAGACGAGCCACCTGAGCAAGCTGAGCCAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643155.1
CDS-3UTR CAA 90 bp GCAGGTGCAGAAGTGGGCCGAGGACTTCGGTCTGCCGAATCGACAGCTGCTGCTAGCTTCTTTATCATTTaGCTGGTTTCTCTTGGATGG +
Preference number: 5 (lower is better)
Translates to: AGAEVGRGLRSAESTAAASFFII*LVSLGW
Trigger: CCATCCAAGAGAAACCAGCAAAATGATAAAGAAGCT...AGCAGCAGCTGTCGATTCGGCAGACCGAAGTCCTCGGCCCACTTCTGCACCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643155.1
CDS-3UTR CAA 90 bp TCCAAAGGGGATAAGACTAGGGAGAGACGCGGAAGTCCCACTAAGCTGGCTTTGTTGTCATGTGGTGTCTaGTGGGGAGAACGGCTCCTA +
Preference number: 5 (lower is better)
Translates to: SKGDKTRERRGSPTKLALLSCGV*WGERLL
Trigger: TAGGAGCCGTTCTCCCCACAAGACACCACATGACAA...CAAAGCCAGCTTAGTGGGACTTCCGCGTCTCTCCCTAGTCTTATCCCCTTTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp TCCAAAGGGGATAAGACTAGGGAGAGACGCGGAAGTCCCACTAAGCTGGCTTTGTGGGGCTTATACCCCTaGTCATGTGGTGTCTTGTGG +
Preference number: 5 (lower is better)
Translates to: SKGDKTRERRGSPTKLALWGLYP*SCGVLW
Trigger: CCACAAGACACCACATGACAAGGGGTATAAGCCCCA...CAAAGCCAGCTTAGTGGGACTTCCGCGTCTCTCCCTAGTCTTATCCCCTTTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp CTAGGGAGAGACGCGGAAGTCCCACTAAGCTGGCTTTGGCTTCCAACACAGCTGTGTAAGCTGCATTTCTaGTCACCACTCCTGGCAACA +
Preference number: 5 (lower is better)
Translates to: LGRDAEVPLSWLWLPTQLCKLHF*SPLLAT
Trigger: TGTTGCCAGGAGTGGTGACAAGAAATGCAGCTTACA...CAGCTGTGTTGGAAGCCAAAGCCAGCTTAGTGGGACTTCCGCGTCTCTCCCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR CAA 90 bp GCTCTGGCTCCAGTTCCCGAGGTTTGTTGTCTCCTCACCCCCAGCTGCCAAGCAGAGTCCTCATGTGGCTaGGAGGAAATCTTTATTTCT +
Preference number: 5 (lower is better)
Translates to: ALAPVPEVCCLLTPSCQAESSCG*EEIFIS
Trigger: AGAAATAAAGATTTCCTCCAAGCCACATGAGGACTC...TGCTTGGCAGCTGGGGGTGAGGAGACAACAAACCTCGGGAACTGGAGCCAGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR CAA 90 bp GCTGCTCCATCGAGGCTCCGGGACGCCCGTTTACTTGCTGTACGCTCGAAGTGTCCTCCATTTTCACAATaGGTCATGTGGACAAAGTAC +
Preference number: 5 (lower is better)
Translates to: AAPSRLRDARLLAVRSKCPPFSQ*VMWTKY
Trigger: GTACTTTGTCCACATGACCAATTGTGAAAATGGAGG...ACACTTCGAGCGTACAGCAAGTAAACGGGCGTCCCGGAGCCTCGATGGAGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642643.1
ENST00000648891.1
CDS-3UTR CAA 90 bp TGGGCCGAGGACTTCGGTCTGCCGAATCGACAGCTGCTGCTCCATCGAGGCTCCGCAACTTTAGTAGCTTaGCTTTATGAAGATCAACTC +
Preference number: 5 (lower is better)
Translates to: WAEDFGLPNRQLLLHRGSATLVA*LYEDQL
Trigger: GAGTTGATCTTCATAAAGCAAAGCTACTAAAGTTGC...GGAGCCTCGATGGAGCAGCAGCTGTCGATTCGGCAGACCGAAGTCCTCGGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642643.1
CDS CCA 90 bp GAGCCAAAGGCAAAGCTTTGCAGAGACTCCGACGAGGTGGTCATCTaGCTTTTACTAGGAACTACCGAATGCTTGGGACCCTCCCATTCA +
Preference number: 5 (lower is better)
Translates to: EPKAKLCRDSDEVVI*LLLGTTECLGPSHS
Trigger: TGAATGGGAGGGTCCCAAGCATTCGGTAGTTCCTAGTAAAAGCCAGATGACCACCTCGTCGGAGTCTCTGCAAAGCTTTGCCTTTGGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646871.1
CDS-3UTR CAA 90 bp GCCCAGGCTGGTCTTAAACTACTGGACTCAAGTGATCTGCCTGTCTTGGCCTCCGTCCGCTCCTTGTTCTaGGTCAAGTCTTCATGTGTA +
Preference number: 5 (lower is better)
Translates to: AQAGLKLLDSSDLPVLASVRSLF*VKSSCV
Trigger: TACACATGAAGACTTGACCAAGAACAAGGAGCGGAC...GGAGGCCAAGACAGGCAGATCACTTGAGTCCAGTAGTTTAAGACCAGCCTGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000645184.1
ENST00000648181.1
CDS-3UTR CAA 90 bp GCCCAGGCTGGTCTTAAACTACTGGACTCAAGTGATCTGCCTGTCTTGGCCTCCTCTGATGTCCGCTCCTaGTTCTTGGTCAAGTCTTCA +
Preference number: 5 (lower is better)
Translates to: AQAGLKLLDSSDLPVLASSDVRS*FLVKSS
Trigger: TGAAGACTTGACCAAGAACAAGGAGCGGACATCAGA...GGAGGCCAAGACAGGCAGATCACTTGAGTCCAGTAGTTTAAGACCAGCCTGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000645184.1
ENST00000648181.1
CDS-3UTR CAA 90 bp CTCTGGCTCAGCTTGCTCAGGTGGCTCGTCTTCCTTTTTCACTTCAGCCTTCACTCTGACTCTACTTCTTaGCCTTCTTCCTCGGACACC +
Preference number: 5 (lower is better)
Translates to: LWLSLLRWLVFLFHFSLHSDSTS*PSSSDT
Trigger: GGTGTCCGAGGAAGAAGGCAAAGAAGTAGAGTCAGA...GTGAAGGCTGAAGTGAAAAAGGAAGACGAGCCACCTGAGCAAGCTGAGCCAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
CDS-3UTR CAA 90 bp GCCCAGGCTGGTCTTAAACTACTGGACTCAAGTGATCTGCCTGTCTTGGCCTCCAAAGATGGGTCTGTTTaGAGTTCCGGTTCAGGAGCT +
Preference number: 5 (lower is better)
Translates to: AQAGLKLLDSSDLPVLASKDGSV*SSGSGA
Trigger: AGCTCCTGAACCGGAACTCAAAACAGACCCATCTTT...GGAGGCCAAGACAGGCAGATCACTTGAGTCCAGTAGTTTAAGACCAGCCTGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000645184.1
ENST00000648181.1
CDS-3UTR CAA 90 bp TCGACAGCTGCTGCTCCATCGAGGCTCCGGGACGCCCGTTTACTTGCTGTACGCATTCTGTTTCTGCTTTaGATTGAGGGCTTTCTTCTT +
Preference number: 5 (lower is better)
Translates to: STAAAPSRLRDARLLAVRILFLL*IEGFLL
Trigger: AAGAAGAAAGCCCTCAATCAAAAGCAGAAACAGAAT...GCGTACAGCAAGTAAACGGGCGTCCCGGAGCCTCGATGGAGCAGCAGCTGTCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
CDS-3UTR CAA 90 bp GCATCTTTCCGAGGTCTGTGGATCAGGGCTGGTGCCCTCCCTGGCATTCTGATATCCAACAAAGAAACCTaGCAGTGCATGTTCCTGTGT +
Preference number: 5 (lower is better)
Translates to: ASFRGLWIRAGALPGILISNKET*QCMFLC
Trigger: ACACAGGAACATGCACTGCAAGGTTTCTTTGTTGGA...TATCAGAATGCCAGGGAGGGCACCAGCCCTGATCCACAGACCTCGGAAAGATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp GGTAGCTCTTCCTACAGGCCATCTGGCCATCAGGCAGTGGGCATGCACTACATGCTAATAATGCTAAGGTaGCAAAGGAACAGGGCAGAC +
Preference number: 5 (lower is better)
Translates to: GSSSYRPSGHQAVGMHYMLIMLR*QRNRAD
Trigger: GTCTGCCCTGTTCCTTTGCAACCTTAGCATTATTAG...CATGTAGTGCATGCCCACTGCCTGATGGCCAGATGGCCTGTAGGAAGAGCTACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR CAA 90 bp GTCCATGTTCCCCAGTCTGGTCTTGAATTCCTGAGCTTGAGCGATCGGCCGCCTTCTCCAGGCCGAATCTaGATGAAAAAGCTACTACGT +
Preference number: 5 (lower is better)
Translates to: VHVPQSGLEFLSLSDRPPSPGRI*MKKLLR
Trigger: ACGTAGTAGCTTTTTCATCAAGATTCGGCCTGGAGA...AGGCGGCCGATCGCTCAAGCTCAGGAATTCAAGACCAGACTGGGGAACATGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642643.1
CDS-3UTR CAA 90 bp GCCCAGGCTGGTCTTAAACTACTGGACTCAAGTGATCTGCCTGTCTTGGCCTCCACTTTCATACTGCTCTaGCTCTCCAGGCCGAATCTT +
Preference number: 5 (lower is better)
Translates to: AQAGLKLLDSSDLPVLASTFILL*LSRPNL
Trigger: AAGATTCGGCCTGGAGAGCAAGAGCAGTATGAAAGT...GGAGGCCAAGACAGGCAGATCACTTGAGTCCAGTAGTTTAAGACCAGCCTGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000645184.1
ENST00000648181.1
CDS-3UTR CAA 90 bp CTGACCCTGAGTAATGGCAGGTGCAGAAGTGGGCCGAGGACTTCGGTCTGCCGAGCAAGAAATTTGCTTTaGGGAATGGTGTCTGTAGAT +
Preference number: 5 (lower is better)
Translates to: LTLSNGRCRSGPRTSVCRARNLL*GMVSVD
Trigger: ATCTACAGACACCATTCCCAAAAGCAAATTTCTTGC...TCGGCAGACCGAAGTCCTCGGCCCACTTCTGCACCTGCCATTACTCAGGGTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
CDS-3UTR CAA 90 bp CTAGGGAGAGACGCGGAAGTCCCACTAAGCTGGCTTTGGCTTCCAACACAGCTGCCTAGCGCAAGAAATTaGCTTTTGGGAATGGTGTCT +
Preference number: 5 (lower is better)
Translates to: LGRDAEVPLSWLWLPTQLPSARN*LLGMVS
Trigger: AGACACCATTCCCAAAAGCAAATTTCTTGCGCTAGG...CAGCTGTGTTGGAAGCCAAAGCCAGCTTAGTGGGACTTCCGCGTCTCTCCCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp AGGCCGTGGTTCTGGTACAGACTCCATGAAGTTCTTTTTCAGCTCACTGATGCTTTGCCTGGTCTGAGCTaGAGTCCGGCCACTGTATCG +
Preference number: 5 (lower is better)
Translates to: RPWFWYRLHEVLFQLTDALPGLS*SPATVS
Trigger: CGATACAGTGGCCGGACTCAAGCTCAGACCAGGCAA...AGCATCAGTGAGCTGAAAAAGAACTTCATGGAGTCTGTACCAGAACCACGGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
CDS-3UTR CAA 90 bp GGGCTCTTTCCCTCCCTCCTGTTGTTCATGTCTCACATGGGTACCAAAAGAAAATTGCCTGGTCTGAGCTaGAGTCCGGCCACTGTATCG +
Preference number: 5 (lower is better)
Translates to: GLFPSLLLFMSHMGTKRKLPGLS*SPATVS
Trigger: CGATACAGTGGCCGGACTCAAGCTCAGACCAGGCAA...TTTTCTTTTGGTACCCATGTGAGACATGAACAACAGGAGGGAGGGAAAGAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp GGTAGCTCTTCCTACAGGCCATCTGGCCATCAGGCAGTGGGCATGCACTACATGTTCTCCTGTGGGGATTaGCCCATTGATGTTAAGAGT +
Preference number: 5 (lower is better)
Translates to: GSSSYRPSGHQAVGMHYMFSCGD*PIDVKS
Trigger: ACTCTTAACATCAATGGGCAAATCCCCACAGGAGAA...CATGTAGTGCATGCCCACTGCCTGATGGCCAGATGGCCTGTAGGAAGAGCTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR CAA 90 bp CTAGGGAGAGACGCGGAAGTCCCACTAAGCTGGCTTTGGCTTCCAACACAGCTGTTCTCCTGTGGGGATTaGCCCATTGATGTTAAGAGT +
Preference number: 5 (lower is better)
Translates to: LGRDAEVPLSWLWLPTQLFSCGD*PIDVKS
Trigger: ACTCTTAACATCAATGGGCAAATCCCCACAGGAGAA...CAGCTGTGTTGGAAGCCAAAGCCAGCTTAGTGGGACTTCCGCGTCTCTCCCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR CAA 90 bp GCATCTTTCCGAGGTCTGTGGATCAGGGCTGGTGCCCTCCCTGGCATTCTGATATACAGTCTTGGTAATTaGAGTTGTGGTGGTGCTGCT +
Preference number: 5 (lower is better)
Translates to: ASFRGLWIRAGALPGILIYSLGN*SCGGAA
Trigger: AGCAGCACCACCACAACTCAAATTACCAAGACTGTA...TATCAGAATGCCAGGGAGGGCACCAGCCCTGATCCACAGACCTCGGAAAGATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp GAAGCTGGAACTGGGATTCTAAGGAGCCTTGAGGCCAATGTGTTTGTGGGAAGCTGGGGCTTATACCCCTaGTCATGTGGTGTCTTGTGG +
Preference number: 5 (lower is better)
Translates to: EAGTGILRSLEANVFVGSWGLYP*SCGVLW
Trigger: CCACAAGACACCACATGACAAGGGGTATAAGCCCCA...GCTTCCCACAAACACATTGGCCTCAAGGCTCCTTAGAATCCCAGTTCCAGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp TCCAAAGGGGATAAGACTAGGGAGAGACGCGGAAGTCCCACTAAGCTGGCTTTGTTGAGGCCAATGTGTTaGTGGGAAGCAGTTGGAAGG +
Preference number: 5 (lower is better)
Translates to: SKGDKTRERRGSPTKLALLRPMC*WEAVGR
Trigger: CCTTCCAACTGCTTCCCACAAACACATTGGCCTCAA...CAAAGCCAGCTTAGTGGGACTTCCGCGTCTCTCCCTAGTCTTATCCCCTTTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp AAAAATGCACACACCCGAAATGAGTTCAAACCAGCCGAAACAAAACTCAGGCAGGCAACACGACCAGGCTaGGGCACTACCCCAAAGCCC +
Preference number: 5 (lower is better)
Translates to: KNAHTRNEFKPAETKLRQATRPG*GTTPKP
Trigger: GGGCTTTGGGGTAGTGCCCAAGCCTGGTCGTGTTGC...CTGCCTGAGTTTTGTTTCGGCTGGTTTGAACTCATTTCGGGTGTGTGCATTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp CAGCTGACAAGAGTCCTTGGAGGATTTCCCGAAGAATTCCATGGACCCTGTCAGGGAAGGACACCCATCTaGCTGGGCTTGTCCAAATCT +
Preference number: 5 (lower is better)
Translates to: QLTRVLGGFPEEFHGPCQGRTPI*LGLSKS
Trigger: AGATTTGGACAAGCCCAGCAAGATGGGTGTCCTTCC...CTGACAGGGTCCATGGAATTCTTCGGGAAATCCTCCAAGGACTCTTGTCAGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR CAA 90 bp TCCAAAGGGGATAAGACTAGGGAGAGACGCGGAAGTCCCACTAAGCTGGCTTTGAAACCCCAAGAACTGTaGCCAGAGATGGAGGAAAGG +
Preference number: 5 (lower is better)
Translates to: SKGDKTRERRGSPTKLALKPQEL*PEMEER
Trigger: CCTTTCCTCCATCTCTGGCAACAGTTCTTGGGGTTT...CAAAGCCAGCTTAGTGGGACTTCCGCGTCTCTCCCTAGTCTTATCCCCTTTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR CAA 90 bp CTAGGGAGAGACGCGGAAGTCCCACTAAGCTGGCTTTGGCTTCCAACACAGCTGGCCAAAACAGCAGACTaGATTATTGCCTGTGTAGTC +
Preference number: 5 (lower is better)
Translates to: LGRDAEVPLSWLWLPTQLAKTAD*IIACVV
Trigger: GACTACACAGGCAATAATCAAGTCTGCTGTTTTGGC...CAGCTGTGTTGGAAGCCAAAGCCAGCTTAGTGGGACTTCCGCGTCTCTCCCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS GCA 90 bp TCTGTCTCCTTGCTGCTTATGGAGAGGGAGCCAAAGGCAAAGCTTTaGAGAGACTCCGACGAGGTGGTCATCTGGCTTTTACTAGGAACT +
Preference number: 5 (lower is better)
Translates to: SVSLLLMEREPKAKL*RDSDEVVIWLLLGT
Trigger: AGTTCCTAGTAAAAGCCAGATGACCACCTCGTCGGAGTCTCTGCAAAGCTTTGCCTTTGGCTCCCTCTCCATAAGCAGCAAGGAGACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460378.1
ENST00000646871.1
CDS GCA 90 bp GTCTGTCTCACTCCAAACCTCAAACACCTTTCACCGCATTGCTTTTaGTGTCTAGTGCAGACTGAGCACGTAGCAGGGGCTCAGATCACA +
Preference number: 5 (lower is better)
Translates to: VCLTPNLKHLSPHCF*CLVQTEHVAGAQIT
Trigger: TGTGATCTGAGCCCCTGCTACGTGCTCAGTCTGCACTAGACAGCAAAAGCAATGCGGTGAAAGGTGTTTGAGGTTTGGAGTGAGACAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649674.1
CDS-3UTR CAA 90 bp TCCAAAGGGGATAAGACTAGGGAGAGACGCGGAAGTCCCACTAAGCTGGCTTTGTCTGATGTCCGCTCCTaGTTCTTGGTCAAGTCTTCA +
Preference number: 5 (lower is better)
Translates to: SKGDKTRERRGSPTKLALSDVRS*FLVKSS
Trigger: TGAAGACTTGACCAAGAACAAGGAGCGGACATCAGA...CAAAGCCAGCTTAGTGGGACTTCCGCGTCTCTCCCTAGTCTTATCCCCTTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp CGAATCGACAGCTGCTGCTCCATCGAGGCTCCGGGACGCCCGTTTACTTGCTGTTCTTTTACTTCTATTTaGGAGCACTCTTCAAGTCCT +
Preference number: 5 (lower is better)
Translates to: RIDSCCSIEAPGRPFTCCSFTSI*EHSSSP
Trigger: AGGACTTGAAGAGTGCTCCAAAATAGAAGTAAAAGA...ACAGCAAGTAAACGGGCGTCCCGGAGCCTCGATGGAGCAGCAGCTGTCGATTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
CDS-3UTR CAA 90 bp CTGACCCTGAGTAATGGCAGGTGCAGAAGTGGGCCGAGGACTTCGGTCTGCCGATACATAGACAACTTTTaGGCATTCTCAAGAAACTCC +
Preference number: 5 (lower is better)
Translates to: LTLSNGRCRSGPRTSVCRYIDNF*AFSRNS
Trigger: GGAGTTTCTTGAGAATGCCAAAAAGTTGTCTATGTA...TCGGCAGACCGAAGTCCTCGGCCCACTTCTGCACCTGCCATTACTCAGGGTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
CDS-3UTR CAA 90 bp CAGAAGTGGGCCGAGGACTTCGGTCTGCCGAATCGACAGCTGCTGCTCCATCGATACATAGACAACTTTTaGGCATTCTCAAGAAACTCC +
Preference number: 5 (lower is better)
Translates to: QKWAEDFGLPNRQLLLHRYIDNF*AFSRNS
Trigger: GGAGTTTCTTGAGAATGCCAAAAAGTTGTCTATGTA...TCGATGGAGCAGCAGCTGTCGATTCGGCAGACCGAAGTCCTCGGCCCACTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
CDS-3UTR CAA 90 bp CTAGGGAGAGACGCGGAAGTCCCACTAAGCTGGCTTTGGCTTCCAACACAGCTGCTCCTTCCAAGTCCTTaGCTTTATGAAGATCAACTC +
Preference number: 5 (lower is better)
Translates to: LGRDAEVPLSWLWLPTQLLLPSP*LYEDQL
Trigger: GAGTTGATCTTCATAAAGCAAAGGACTTGGAAGGAG...CAGCTGTGTTGGAAGCCAAAGCCAGCTTAGTGGGACTTCCGCGTCTCTCCCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp TCAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTCCTATAATTGCACTGGGTTGCCTGGTCTGAGCTaGAGTCCGGCCACTGTATCG +
Preference number: 5 (lower is better)
Translates to: SEANHLLVAPNSSYNCTGLPGLS*SPATVS
Trigger: CGATACAGTGGCCGGACTCAAGCTCAGACCAGGCAA...CCCAGTGCAATTATAGGAGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648181.1
ENST00000648891.1
CDS-3UTR CAA 90 bp ACTATCAAGATCAGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAGGGCTCTGGCTCAGCTaGCTCAGGTGGCTCGTCTTC +
Preference number: 5 (lower is better)
Translates to: TIKIRGHHTAITQLKPRTGLWLS*LRWLVF
Trigger: GAAGACGAGCCACCTGAGCAAGCTGAGCCAGAGCCC...TGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCTGATCTTGATAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp GAAGTCAACATGCAAACAGAGGACACATACTTGTCACAAGTGAACTTGAGGTCAGGGCTCTGGCTCAGCTaGCTCAGGTGGCTCGTCTTC +
Preference number: 5 (lower is better)
Translates to: EVNMQTEDTYLSQVNLRSGLWLS*LRWLVF
Trigger: GAAGACGAGCCACCTGAGCAAGCTGAGCCAGAGCCC...TGACCTCAAGTTCACTTGTGACAAGTATGTGTCCTCTGTTTGCATGTTGACTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp GAAGCTGGAACTGGGATTCTAAGGAGCCTTGAGGCCAATGTGTTTGTGGGAAGCGTGTTTGGTCACCATTaGAGGTGGGTACTGTCACCT +
Preference number: 5 (lower is better)
Translates to: EAGTGILRSLEANVFVGSVFGHH*RWVLSP
Trigger: AGGTGACAGTACCCACCTCAAATGGTGACCAAACAC...GCTTCCCACAAACACATTGGCCTCAAGGCTCCTTAGAATCCCAGTTCCAGCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
CDS-3UTR CAA 90 bp TCCAAAGGGGATAAGACTAGGGAGAGACGCGGAAGTCCCACTAAGCTGGCTTTGGTGGGGATTTGCCCATaGATGTTAAGAGTTCGGAAG +
Preference number: 5 (lower is better)
Translates to: SKGDKTRERRGSPTKLALVGICP*MLRVRK
Trigger: CTTCCGAACTCTTAACATCAATGGGCAAATCCCCAC...CAAAGCCAGCTTAGTGGGACTTCCGCGTCTCTCCCTAGTCTTATCCCCTTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR CAA 90 bp GCCCAGGCTGGTCTTAAACTACTGGACTCAAGTGATCTGCCTGTCTTGGCCTCCTTCTCCTGTGGGGATTaGCCCATTGATGTTAAGAGT +
Preference number: 5 (lower is better)
Translates to: AQAGLKLLDSSDLPVLASFSCGD*PIDVKS
Trigger: ACTCTTAACATCAATGGGCAAATCCCCACAGGAGAA...GGAGGCCAAGACAGGCAGATCACTTGAGTCCAGTAGTTTAAGACCAGCCTGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000645184.1
ENST00000648181.1
CDS-3UTR CAA 90 bp TCCAAAGGGGATAAGACTAGGGAGAGACGCGGAAGTCCCACTAAGCTGGCTTTGCTCAGATGTGATAGTTaGAGCTGTCAGCAAGACTCC +
Preference number: 5 (lower is better)
Translates to: SKGDKTRERRGSPTKLALLRCDS*SCQQDS
Trigger: GGAGTCTTGCTGACAGCTCAAACTATCACATCTGAG...CAAAGCCAGCTTAGTGGGACTTCCGCGTCTCTCCCTAGTCTTATCCCCTTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp CCCTTGTCATGTGGTGTCTTGTGGGGAGAACGGCTCCTAAAAGTCAATTCCTTGTGCTCCTTTGCCTCCTaGATGGCTTGTACAAGGACC +
Preference number: 5 (lower is better)
Translates to: PLSCGVLWGERLLKVNSLCSFAS*MACTRT
Trigger: GGTCCTTGTACAAGCCATCAAGGAGGCAAAGGAGCA...CAAGGAATTGACTTTTAGGAGCCGTTCTCCCCACAAGACACCACATGACAAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp GTTGGGAGAAGCAGCTTTAGACATTTCTCTTGCTCACTGCCCTTGAGCCCCAGTCCCTGTCAGTGTCTGTaGGGGTTGGAAATAAATGGG +
Preference number: 5 (lower is better)
Translates to: VGRSSFRHFSCSLPLSPSPCQCL*GLEING
Trigger: CCCATTTATTTCCAACCCCAACAGACACTGACAGGG...ACTGGGGCTCAAGGGCAGTGAGCAAGAGAAATGTCTAAAGCTGCTTCTCCCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp CCAACACAGCTGACAAGAGTCCTTGGAGGATTTCCCGAAGAATTCCATGGACCCAGACTTTGGACGGTGTaGGGAGAAGCAGCTTTAGAC +
Preference number: 5 (lower is better)
Translates to: PTQLTRVLGGFPEEFHGPRLWTV*GEAALD
Trigger: GTCTAAAGCTGCTTCTCCCAACACCGTCCAAAGTCT...GGGTCCATGGAATTCTTCGGGAAATCCTCCAAGGACTCTTGTCAGCTGTGTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp CAGCTGACAAGAGTCCTTGGAGGATTTCCCGAAGAATTCCATGGACCCTGTCAGAGACTTTGGACGGTGTaGGGAGAAGCAGCTTTAGAC +
Preference number: 5 (lower is better)
Translates to: QLTRVLGGFPEEFHGPCQRLWTV*GEAALD
Trigger: GTCTAAAGCTGCTTCTCCCAACACCGTCCAAAGTCT...CTGACAGGGTCCATGGAATTCTTCGGGAAATCCTCCAAGGACTCTTGTCAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp GTTGGGAGAAGCAGCTTTAGACATTTCTCTTGCTCACTGCCCTTGAGCCCCAGTTTTCCCTCCCTCCTGTaGTTCATGTCTCACATGGGT +
Preference number: 5 (lower is better)
Translates to: VGRSSFRHFSCSLPLSPSFPSLL*FMSHMG
Trigger: ACCCATGTGAGACATGAACAACAGGAGGGAGGGAAA...ACTGGGGCTCAAGGGCAGTGAGCAAGAGAAATGTCTAAAGCTGCTTCTCCCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp CAGCTGACAAGAGTCCTTGGAGGATTTCCCGAAGAATTCCATGGACCCTGTCAGTTTCCCTCCCTCCTGTaGTTCATGTCTCACATGGGT +
Preference number: 5 (lower is better)
Translates to: QLTRVLGGFPEEFHGPCQFPSLL*FMSHMG
Trigger: ACCCATGTGAGACATGAACAACAGGAGGGAGGGAAA...CTGACAGGGTCCATGGAATTCTTCGGGAAATCCTCCAAGGACTCTTGTCAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp CAGCTGACAAGAGTCCTTGGAGGATTTCCCGAAGAATTCCATGGACCCTGTCAGAAACCCCAAGAACTGTaGCCAGAGATGGAGGAAAGG +
Preference number: 5 (lower is better)
Translates to: QLTRVLGGFPEEFHGPCQKPQEL*PEMEER
Trigger: CCTTTCCTCCATCTCTGGCAACAGTTCTTGGGGTTT...CTGACAGGGTCCATGGAATTCTTCGGGAAATCCTCCAAGGACTCTTGTCAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR CAA 90 bp GGGCTCTTTCCCTCCCTCCTGTTGTTCATGTCTCACATGGGTACCAAAAGAAAATCTGTTGTCATGATGTaGCCAGAAGCAGCCGTCGGG +
Preference number: 5 (lower is better)
Translates to: GLFPSLLLFMSHMGTKRKSVVMM*PEAAVG
Trigger: CCCGACGGCTGCTTCTGGCAACATCATGACAACAGA...TTTTCTTTTGGTACCCATGTGAGACATGAACAACAGGAGGGAGGGAAAGAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373798.5
CDS-3UTR CAA 90 bp CAATGCAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACACCAGGCAGGAAAAAGTaGTCTGTCCCTGTACAGCTC +
Preference number: 5 (lower is better)
Translates to: QCRKAGFGQSIATPLYPTPGRKK*SVPVQL
Trigger: GAGCTGTACAGGGACAGACAACTTTTTCCTGCCTGG...TGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTGCATTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS GCA 90 bp CAGAAAACAAGTTTCGAGTCTGCTGGTGTCTTGTCCACCATACTATaGTCCCGCTCGTGTCTTCTCGGCTGTTACAGCTCTCTAAGGGTA +
Preference number: 5 (lower is better)
Translates to: QKTSFESAGVLSTIL*SRSCLLGCYSSLRV
Trigger: TACCCTTAGAGAGCTGTAACAGCCGAGAAGACACGAGCGGGAGCATAGTATGGTGGACAAGACACCAGCAGACTCGAAACTTGTTTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649674.1
CDS CCA 90 bp TACCCCTTCCATGCACTCTCAGTAACTAGAAAACCTGAGGGACACTaGAGCATCTCTCTGAGCTACCAAGTGTGTTTGGCCCTTATGACC +
Preference number: 5 (lower is better)
Translates to: YPFHALSVTRKPEGH*SISLSYQVCLALMT
Trigger: GGTCATAAGGGCCAAACACACTTGGTAGCTCAGAGAGATGCTCCAGTGTCCCTCAGGTTTTCTAGTTACTGAGAGTGCATGGAAGGGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649674.1
CDS-3UTR CAA 90 bp CCAACACAGCTGACAAGAGTCCTTGGAGGATTTCCCGAAGAATTCCATGGACCCGTCCGCTCCTTGTTCTaGGTCAAGTCTTCATGTGTA +
Preference number: 5 (lower is better)
Translates to: PTQLTRVLGGFPEEFHGPVRSLF*VKSSCV
Trigger: TACACATGAAGACTTGACCAAGAACAAGGAGCGGAC...GGGTCCATGGAATTCTTCGGGAAATCCTCCAAGGACTCTTGTCAGCTGTGTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp CAATGCAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACATCTGACTCTACTTCTTaGCCTTCTTCCTCGGACACC +
Preference number: 5 (lower is better)
Translates to: QCRKAGFGQSIATPLYPTSDSTS*PSSSDT
Trigger: GGTGTCCGAGGAAGAAGGCAAAGAAGTAGAGTCAGA...TGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTGCATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp GGCTCAGCTTGCTCAGGTGGCTCGTCTTCCTTTTTCACTTCAGCCTTCACTGTTAAAGATGGGTCTGTTTaGAGTTCCGGTTCAGGAGCT +
Preference number: 5 (lower is better)
Translates to: GSACSGGSSSFFTSAFTVKDGSV*SSGSGA
Trigger: AGCTCCTGAACCGGAACTCAAAACAGACCCATCTTT...AACAGTGAAGGCTGAAGTGAAAAAGGAAGACGAGCCACCTGAGCAAGCTGAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
CDS-3UTR CAA 90 bp GCATCTTTCCGAGGTCTGTGGATCAGGGCTGGTGCCCTCCCTGGCATTCTGATATCGTTTAAGCAAATCTaGTCCCTTAGCATGTTTCTC +
Preference number: 5 (lower is better)
Translates to: ASFRGLWIRAGALPGILISFKQI*SLSMFL
Trigger: GAGAAACATGCTAAGGGACAAGATTTGCTTAAACGA...TATCAGAATGCCAGGGAGGGCACCAGCCCTGATCCACAGACCTCGGAAAGATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp CTCTGGCTCAGCTTGCTCAGGTGGCTCGTCTTCCTTTTTCACTTCAGCCTTCACCTAATAATGCTAAGGTaGCAAAGGAACAGGGCAGAC +
Preference number: 5 (lower is better)
Translates to: LWLSLLRWLVFLFHFSLHLIMLR*QRNRAD
Trigger: GTCTGCCCTGTTCCTTTGCAACCTTAGCATTATTAG...GTGAAGGCTGAAGTGAAAAAGGAAGACGAGCCACCTGAGCAAGCTGAGCCAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
CDS-3UTR CAA 90 bp GAAGCTGGAACTGGGATTCTAAGGAGCCTTGAGGCCAATGTGTTTGTGGGAAGCACTTTCATACTGCTCTaGCTCTCCAGGCCGAATCTT +
Preference number: 5 (lower is better)
Translates to: EAGTGILRSLEANVFVGSTFILL*LSRPNL
Trigger: AAGATTCGGCCTGGAGAGCAAGAGCAGTATGAAAGT...GCTTCCCACAAACACATTGGCCTCAAGGCTCCTTAGAATCCCAGTTCCAGCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp GCATCTTTCCGAGGTCTGTGGATCAGGGCTGGTGCCCTCCCTGGCATTCTGATAGCAAGAAATTTGCTTTaGGGAATGGTGTCTGTAGAT +
Preference number: 5 (lower is better)
Translates to: ASFRGLWIRAGALPGILIARNLL*GMVSVD
Trigger: ATCTACAGACACCATTCCCAAAAGCAAATTTCTTGC...TATCAGAATGCCAGGGAGGGCACCAGCCCTGATCCACAGACCTCGGAAAGATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp GGCAGGAAAAAGTTGTCTGTCCCTGTACAGCTCAGAAATACTCATAAAAAGGCCTTGCCTGGTCTGAGCTaGAGTCCGGCCACTGTATCG +
Preference number: 5 (lower is better)
Translates to: GRKKLSVPVQLRNTHKKALPGLS*SPATVS
Trigger: CGATACAGTGGCCGGACTCAAGCTCAGACCAGGCAA...GGCCTTTTTATGAGTATTTCTGAGCTGTACAGGGACAGACAACTTTTTCCTGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp AGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAGAAGTTCAATGGTTGCCTGGTCTGAGCTaGAGTCCGGCCACTGTATCG +
Preference number: 5 (lower is better)
Translates to: RGHHTAITQLKPRTEVQWLPGLS*SPATVS
Trigger: CGATACAGTGGCCGGACTCAAGCTCAGACCAGGCAA...CCATTGAACTTCTGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp GAAGCATGTAGCTGCAGAGACAGTTCTCAGAGGCTAATCATCTACTGGTGGCTCGTGTTTGGTCACCATTaGAGGTGGGTACTGTCACCT +
Preference number: 5 (lower is better)
Translates to: EACSCRDSSQRLIIYWWLVFGHH*RWVLSP
Trigger: AGGTGACAGTACCCACCTCAAATGGTGACCAAACAC...GAGCCACCAGTAGATGATTAGCCTCTGAGAACTGTCTCTGCAGCTACATGCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648181.1
ENST00000648891.1
CDS-3UTR CAA 90 bp CCAACACAGCTGACAAGAGTCCTTGGAGGATTTCCCGAAGAATTCCATGGACCCGTGGGGATTTGCCCATaGATGTTAAGAGTTCGGAAG +
Preference number: 5 (lower is better)
Translates to: PTQLTRVLGGFPEEFHGPVGICP*MLRVRK
Trigger: CTTCCGAACTCTTAACATCAATGGGCAAATCCCCAC...GGGTCCATGGAATTCTTCGGGAAATCCTCCAAGGACTCTTGTCAGCTGTGTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR CAA 90 bp GGGCTCTTTCCCTCCCTCCTGTTGTTCATGTCTCACATGGGTACCAAAAGAAAATTGTCATGTGGTGTCTaGTGGGGAGAACGGCTCCTA +
Preference number: 5 (lower is better)
Translates to: GLFPSLLLFMSHMGTKRKLSCGV*WGERLL
Trigger: TAGGAGCCGTTCTCCCCACAAGACACCACATGACAA...TTTTCTTTTGGTACCCATGTGAGACATGAACAACAGGAGGGAGGGAAAGAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp CCAACACAGCTGACAAGAGTCCTTGGAGGATTTCCCGAAGAATTCCATGGACCCTGTAAGCTGCATTTCTaGTCACCACTCCTGGCAACA +
Preference number: 5 (lower is better)
Translates to: PTQLTRVLGGFPEEFHGPCKLHF*SPLLAT
Trigger: TGTTGCCAGGAGTGGTGACAAGAAATGCAGCTTACA...GGGTCCATGGAATTCTTCGGGAAATCCTCCAAGGACTCTTGTCAGCTGTGTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR CAA 90 bp CTCTTTCCCTCCCTCCTGTTGTTCATGTCTCACATGGGTACCAAAAGAAAAATGAGTTCCCGAGGTTTGTaGTCTCCTCACCCCCAGCTG +
Preference number: 5 (lower is better)
Translates to: LFPSLLLFMSHMGTKRKMSSRGL*SPHPQL
Trigger: CAGCTGGGGGTGAGGAGACAACAAACCTCGGGAACT...CATTTTTCTTTTGGTACCCATGTGAGACATGAACAACAGGAGGGAGGGAAAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR CAA 90 bp ATATTGGCAGTGTTACCTTTAGGTAATACAAAGCTGGAATGCCCAATATTTTTCGAGGTTCCTGCCACTTaGCCCCGCCGGGGCCTCCAC +
Preference number: 5 (lower is better)
Translates to: ILAVLPLGNTKLECPIFFEVPAT*PRRGLH
Trigger: GTGGAGGCCCCGGCGGGGCAAAGTGGCAGGAACCTC...GAAAAATATTGGGCATTCCAGCTTTGTATTACCTAAAGGTAACACTGCCAATAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000644342.1
ENST00000646800.1
CDS GCA 90 bp CTTTCTCTCTTTTTCTTCCATGCTTCTGTGGGCTCTGGCTCAGCTTaGTCAGGTGGCTCGTCTTCCTTTTTCACTTCAGCCTTCACTGTT +
Preference number: 5 (lower is better)
Translates to: LSLFFFHASVGSGSA*SGGSSSFFTSAFTV
Trigger: AACAGTGAAGGCTGAAGTGAAAAAGGAAGACGAGCCACCTGAGCAAGCTGAGCCAGAGCCCACAGAAGCATGGAAGAAAAAGAGAGAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000373800.7
CDS-3UTR CAA 90 bp ATGTTGCCCAGGCTGGTCTTAAACTACTGGACTCAAGTGATCTGCCTGTCTTGGGTCCGCTCCTTGTTCTaGGTCAAGTCTTCATGTGTA +
Preference number: 5 (lower is better)
Translates to: MLPRLVLNYWTQVICLSWVRSLF*VKSSCV
Trigger: TACACATGAAGACTTGACCAAGAACAAGGAGCGGAC...CCAAGACAGGCAGATCACTTGAGTCCAGTAGTTTAAGACCAGCCTGGGCAACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000645184.1
ENST00000648181.1
CDS-3UTR CAA 90 bp CCCTTGTCATGTGGTGTCTTGTGGGGAGAACGGCTCCTAAAAGTCAATTCCTTGTCTGATGTCCGCTCCTaGTTCTTGGTCAAGTCTTCA +
Preference number: 5 (lower is better)
Translates to: PLSCGVLWGERLLKVNSLSDVRS*FLVKSS
Trigger: TGAAGACTTGACCAAGAACAAGGAGCGGACATCAGA...CAAGGAATTGACTTTTAGGAGCCGTTCTCCCCACAAGACACCACATGACAAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp AGGCCGTGGTTCTGGTACAGACTCCATGAAGTTCTTTTTCAGCTCACTGATGCTTCTGACTCTACTTCTTaGCCTTCTTCCTCGGACACC +
Preference number: 5 (lower is better)
Translates to: RPWFWYRLHEVLFQLTDASDSTS*PSSSDT
Trigger: GGTGTCCGAGGAAGAAGGCAAAGAAGTAGAGTCAGA...AGCATCAGTGAGCTGAAAAAGAACTTCATGGAGTCTGTACCAGAACCACGGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
CDS-3UTR CAA 90 bp GAAGCATGTAGCTGCAGAGACAGTTCTCAGAGGCTAATCATCTACTGGTGGCTCAAAGATGGGTCTGTTTaGAGTTCCGGTTCAGGAGCT +
Preference number: 5 (lower is better)
Translates to: EACSCRDSSQRLIIYWWLKDGSV*SSGSGA
Trigger: AGCTCCTGAACCGGAACTCAAAACAGACCCATCTTT...GAGCCACCAGTAGATGATTAGCCTCTGAGAACTGTCTCTGCAGCTACATGCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648181.1
ENST00000648891.1
CDS-3UTR CAA 90 bp CAATGCAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAAAAGATGGGTCTGTTTaGAGTTCCGGTTCAGGAGCT +
Preference number: 5 (lower is better)
Translates to: QCRKAGFGQSIATPLYPTKDGSV*SSGSGA
Trigger: AGCTCCTGAACCGGAACTCAAAACAGACCCATCTTT...TGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTGCATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp GGCTCAGCTTGCTCAGGTGGCTCGTCTTCCTTTTTCACTTCAGCCTTCACTGTTTCCAACAAAGAAACCTaGCAGTGCATGTTCCTGTGT +
Preference number: 5 (lower is better)
Translates to: GSACSGGSSSFFTSAFTVSNKET*QCMFLC
Trigger: ACACAGGAACATGCACTGCAAGGTTTCTTTGTTGGA...AACAGTGAAGGCTGAAGTGAAAAAGGAAGACGAGCCACCTGAGCAAGCTGAGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
CDS-3UTR CAA 90 bp CTAGGGAGAGACGCGGAAGTCCCACTAAGCTGGCTTTGGCTTCCAACACAGCTGTACATAGACAACTTTTaGGCATTCTCAAGAAACTCC +
Preference number: 5 (lower is better)
Translates to: LGRDAEVPLSWLWLPTQLYIDNF*AFSRNS
Trigger: GGAGTTTCTTGAGAATGCCAAAAAGTTGTCTATGTA...CAGCTGTGTTGGAAGCCAAAGCCAGCTTAGTGGGACTTCCGCGTCTCTCCCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp GTTGGGAGAAGCAGCTTTAGACATTTCTCTTGCTCACTGCCCTTGAGCCCCAGTTCTCCAGGCCGAATCTaGATGAAAAAGCTACTACGT +
Preference number: 5 (lower is better)
Translates to: VGRSSFRHFSCSLPLSPSSPGRI*MKKLLR
Trigger: ACGTAGTAGCTTTTTCATCAAGATTCGGCCTGGAGA...ACTGGGGCTCAAGGGCAGTGAGCAAGAGAAATGTCTAAAGCTGCTTCTCCCAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp CCAACACAGCTGACAAGAGTCCTTGGAGGATTTCCCGAAGAATTCCATGGACCCTCTCCAGGCCGAATCTaGATGAAAAAGCTACTACGT +
Preference number: 5 (lower is better)
Translates to: PTQLTRVLGGFPEEFHGPSPGRI*MKKLLR
Trigger: ACGTAGTAGCTTTTTCATCAAGATTCGGCCTGGAGA...GGGTCCATGGAATTCTTCGGGAAATCCTCCAAGGACTCTTGTCAGCTGTGTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp GCTCAGCTTGCTCAGGTGGCTCGTCTTCCTTTTTCACTTCAGCCTTCACTGTTTACTTTCATACTGCTCTaGCTCTCCAGGCCGAATCTT +
Preference number: 5 (lower is better)
Translates to: AQLAQVARLPFSLQPSLFTFILL*LSRPNL
Trigger: AAGATTCGGCCTGGAGAGCAAGAGCAGTATGAAAGT...AAACAGTGAAGGCTGAAGTGAAAAAGGAAGACGAGCCACCTGAGCAAGCTGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642643.1
ENST00000643155.1
CDS-3UTR CAA 90 bp GGCTCAGCTTGCTCAGGTGGCTCGTCTTCCTTTTTCACTTCAGCCTTCACTGTTCCTAGCGCAAGAAATTaGCTTTTGGGAATGGTGTCT +
Preference number: 5 (lower is better)
Translates to: GSACSGGSSSFFTSAFTVPSARN*LLGMVS
Trigger: AGACACCATTCCCAAAAGCAAATTTCTTGCGCTAGG...AACAGTGAAGGCTGAAGTGAAAAAGGAAGACGAGCCACCTGAGCAAGCTGAGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
CDS-3UTR CAA 90 bp CCAACACAGCTGACAAGAGTCCTTGGAGGATTTCCCGAAGAATTCCATGGACCCCCTAGCGCAAGAAATTaGCTTTTGGGAATGGTGTCT +
Preference number: 5 (lower is better)
Translates to: PTQLTRVLGGFPEEFHGPPSARN*LLGMVS
Trigger: AGACACCATTCCCAAAAGCAAATTTCTTGCGCTAGG...GGGTCCATGGAATTCTTCGGGAAATCCTCCAAGGACTCTTGTCAGCTGTGTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp ACTATCAAGATCAGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACATTGCCTGGTCTGAGCTaGAGTCCGGCCACTGTATCG +
Preference number: 5 (lower is better)
Translates to: TIKIRGHHTAITQLKPRTLPGLS*SPATVS
Trigger: CGATACAGTGGCCGGACTCAAGCTCAGACCAGGCAA...TGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCTGATCTTGATAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp TTAGGGGCCTCCTTGGTTTACTATATAATTGTGGGGAACCAGTCCAGATATTTCTTGCCTGGTCTGAGCTaGAGTCCGGCCACTGTATCG +
Preference number: 5 (lower is better)
Translates to: LGASLVYYIIVGNQSRYFLPGLS*SPATVS
Trigger: CGATACAGTGGCCGGACTCAAGCTCAGACCAGGCAA...GAAATATCTGGACTGGTTCCCCACAATTATATAGTAAACCAAGGAGGCCCCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000645184.1
ENST00000648181.1
CDS-3UTR CAA 90 bp TCCATTAGAGCTTTTGGCCCAAAGTGCCTATTTTTCTGTGAGATTTGGTCTCCTTTGCCTGGTCTGAGCTaGAGTCCGGCCACTGTATCG +
Preference number: 5 (lower is better)
Translates to: SIRAFGPKCLFFCEIWSPLPGLS*SPATVS
Trigger: CGATACAGTGGCCGGACTCAAGCTCAGACCAGGCAA...AGGAGACCAAATCTCACAGAAAAATAGGCACTTTGGGCCAAAAGCTCTAATGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp CAGATATCTGAAGCAACTTCCATGTCTTTGACCCAAAGAAGCTCCAAAAAGAAAGGGCTCTGGCTCAGCTaGCTCAGGTGGCTCGTCTTC +
Preference number: 5 (lower is better)
Translates to: QISEATSMSLTQRSSKKKGLWLS*LRWLVF
Trigger: GAAGACGAGCCACCTGAGCAAGCTGAGCCAGAGCCC...TTTCTTTTTGGAGCTTCTTTGGGTCAAAGACATGGAAGTTGCTTCAGATATCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp ATTACTTTGGTGCTGCCAATCACTAATTGGGCAATGCCAATAATGAAGCATTCTGGGCTCTGGCTCAGCTaGCTCAGGTGGCTCGTCTTC +
Preference number: 5 (lower is better)
Translates to: ITLVLPITNWAMPIMKHSGLWLS*LRWLVF
Trigger: GAAGACGAGCCACCTGAGCAAGCTGAGCCAGAGCCC...AGAATGCTTCATTATTGGCATTGCCCAATTAGTGATTGGCAGCACCAAAGTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR CAA 90 bp ATTGTCCAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCGGGCTCTGGCTCAGCTaGCTCAGGTGGCTCGTCTTC +
Preference number: 5 (lower is better)
Translates to: IVQLRSFYSPCNFCTLLSGLWLS*LRWLVF
Trigger: GAAGACGAGCCACCTGAGCAAGCTGAGCCAGAGCCC...GGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTGGACAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644470.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR CAA 90 bp TCCAAAGGGGATAAGACTAGGGAGAGACGCGGAAGTCCCACTAAGCTGGCTTTGTCACTTTTCACAGCATaGGCATTATCTGAGATGGTG +
Preference number: 5 (lower is better)
Translates to: SKGDKTRERRGSPTKLALSLFTA*ALSEMV
Trigger: CACCATCTCAGATAATGCCAATGCTGTGAAAAGTGA...CAAAGCCAGCTTAGTGGGACTTCCGCGTCTCTCCCTAGTCTTATCCCCTTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp CCAACACAGCTGACAAGAGTCCTTGGAGGATTTCCCGAAGAATTCCATGGACCCTACAGTCTTGGTAATTaGAGTTGTGGTGGTGCTGCT +
Preference number: 5 (lower is better)
Translates to: PTQLTRVLGGFPEEFHGPYSLGN*SCGGAA
Trigger: AGCAGCACCACCACAACTCAAATTACCAAGACTGTA...GGGTCCATGGAATTCTTCGGGAAATCCTCCAAGGACTCTTGTCAGCTGTGTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp CCCTTGTCATGTGGTGTCTTGTGGGGAGAACGGCTCCTAAAAGTCAATTCCTTGCAGTGTCTGTTGGGGTaGGAAATAAATGGGCAGAGA +
Preference number: 5 (lower is better)
Translates to: PLSCGVLWGERLLKVNSLQCLLG*EINGQR
Trigger: TCTCTGCCCATTTATTTCCAACCCCAACAGACACTG...CAAGGAATTGACTTTTAGGAGCCGTTCTCCCCACAAGACACCACATGACAAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp GTTGGGAGAAGCAGCTTTAGACATTTCTCTTGCTCACTGCCCTTGAGCCCCAGTGCAACTTCCATGTCTTaGACCCAAAGAAGCTCCAAA +
Preference number: 5 (lower is better)
Translates to: VGRSSFRHFSCSLPLSPSATSMS*TQRSSK
Trigger: TTTGGAGCTTCTTTGGGTCAAAGACATGGAAGTTGC...ACTGGGGCTCAAGGGCAGTGAGCAAGAGAAATGTCTAAAGCTGCTTCTCCCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp GCCACATTCCTTGTCATTTGGGATGAAAGAAAGGCCCAGGATCAGACAGAAGTATTGTCATGTGGTGTCTaGTGGGGAGAACGGCTCCTA +
Preference number: 5 (lower is better)
Translates to: ATFLVIWDERKAQDQTEVLSCGV*WGERLL
Trigger: TAGGAGCCGTTCTCCCCACAAGACACCACATGACAA...TACTTCTGTCTGATCCTGGGCCTTTCTTTCATCCCAAATGACAAGGAATGTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp GCCACATTCCTTGTCATTTGGGATGAAAGAAAGGCCCAGGATCAGACAGAAGTATGGGGCTTATACCCCTaGTCATGTGGTGTCTTGTGG +
Preference number: 5 (lower is better)
Translates to: ATFLVIWDERKAQDQTEVWGLYP*SCGVLW
Trigger: CCACAAGACACCACATGACAAGGGGTATAAGCCCCA...TACTTCTGTCTGATCCTGGGCCTTTCTTTCATCCCAAATGACAAGGAATGTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp CAGCTGACAAGAGTCCTTGGAGGATTTCCCGAAGAATTCCATGGACCCTGTCAGGCCAAAACAGCAGACTaGATTATTGCCTGTGTAGTC +
Preference number: 5 (lower is better)
Translates to: QLTRVLGGFPEEFHGPCQAKTAD*IIACVV
Trigger: GACTACACAGGCAATAATCAAGTCTGCTGTTTTGGC...CTGACAGGGTCCATGGAATTCTTCGGGAAATCCTCCAAGGACTCTTGTCAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR CAA 90 bp CCAACACAGCTGACAAGAGTCCTTGGAGGATTTCCCGAAGAATTCCATGGACCCGCCAAAACAGCAGACTaGATTATTGCCTGTGTAGTC +
Preference number: 5 (lower is better)
Translates to: PTQLTRVLGGFPEEFHGPAKTAD*IIACVV
Trigger: GACTACACAGGCAATAATCAAGTCTGCTGTTTTGGC...GGGTCCATGGAATTCTTCGGGAAATCCTCCAAGGACTCTTGTCAGCTGTGTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR CAA 90 bp AAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAATACATACTGCAGAAAAGCTGGCTTaGGGCAGTCCATTGCTACTC +
Preference number: 5 (lower is better)
Translates to: KAGFGQSIATPLYPTIHTAEKLA*GSPLLL
Trigger: GAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTGC...AGTATGTATTGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp GAAGTCAACATGCAAACAGAGGACACATACTTGTCACAAGTGAACTTGAGGTCATGCAGTGGTGTGATCTaGGCTCACCGCAACCTCTGC +
Preference number: 5 (lower is better)
Translates to: EVNMQTEDTYLSQVNLRSCSGVI*AHRNLC
Trigger: GCAGAGGTTGCGGTGAGCCAAGATCACACCACTGCA...TGACCTCAAGTTCACTTGTGACAAGTATGTGTCCTCTGTTTGCATGTTGACTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646800.1
CDS-3UTR CAA 90 bp TCAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTCCTATAATTGCACTGGGTCTGACTCTACTTCTTaGCCTTCTTCCTCGGACACC +
Preference number: 5 (lower is better)
Translates to: SEANHLLVAPNSSYNCTGSDSTS*PSSSDT
Trigger: GGTGTCCGAGGAAGAAGGCAAAGAAGTAGAGTCAGA...CCCAGTGCAATTATAGGAGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648181.1
ENST00000648891.1
CDS-3UTR CAA 90 bp CCCTTGTCATGTGGTGTCTTGTGGGGAGAACGGCTCCTAAAAGTCAATTCCTTGTCCAACAAAGAAACCTaGCAGTGCATGTTCCTGTGT +
Preference number: 5 (lower is better)
Translates to: PLSCGVLWGERLLKVNSLSNKET*QCMFLC
Trigger: ACACAGGAACATGCACTGCAAGGTTTCTTTGTTGGA...CAAGGAATTGACTTTTAGGAGCCGTTCTCCCCACAAGACACCACATGACAAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp CAATGCAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACACTAATAATGCTAAGGTaGCAAAGGAACAGGGCAGAC +
Preference number: 5 (lower is better)
Translates to: QCRKAGFGQSIATPLYPTLIMLR*QRNRAD
Trigger: GTCTGCCCTGTTCCTTTGCAACCTTAGCATTATTAG...TGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTGCATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp CCCTTGTCATGTGGTGTCTTGTGGGGAGAACGGCTCCTAAAAGTCAATTCCTTGCTAATAATGCTAAGGTaGCAAAGGAACAGGGCAGAC +
Preference number: 5 (lower is better)
Translates to: PLSCGVLWGERLLKVNSLLIMLR*QRNRAD
Trigger: GTCTGCCCTGTTCCTTTGCAACCTTAGCATTATTAG...CAAGGAATTGACTTTTAGGAGCCGTTCTCCCCACAAGACACCACATGACAAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp CCAACACAGCTGACAAGAGTCCTTGGAGGATTTCCCGAAGAATTCCATGGACCCCTCCTTCCAAGTCCTTaGCTTTATGAAGATCAACTC +
Preference number: 5 (lower is better)
Translates to: PTQLTRVLGGFPEEFHGPLLPSP*LYEDQL
Trigger: GAGTTGATCTTCATAAAGCAAAGGACTTGGAAGGAG...GGGTCCATGGAATTCTTCGGGAAATCCTCCAAGGACTCTTGTCAGCTGTGTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp GAAGCTGGAACTGGGATTCTAAGGAGCCTTGAGGCCAATGTGTTTGTGGGAAGCCTCCTTCCAAGTCCTTaGCTTTATGAAGATCAACTC +
Preference number: 5 (lower is better)
Translates to: EAGTGILRSLEANVFVGSLLPSP*LYEDQL
Trigger: GAGTTGATCTTCATAAAGCAAAGGACTTGGAAGGAG...GCTTCCCACAAACACATTGGCCTCAAGGCTCCTTAGAATCCCAGTTCCAGCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp GAAGCATGTAGCTGCAGAGACAGTTCTCAGAGGCTAATCATCTACTGGTGGCTCTCTCCAGGCCGAATCTaGATGAAAAAGCTACTACGT +
Preference number: 5 (lower is better)
Translates to: EACSCRDSSQRLIIYWWLSPGRI*MKKLLR
Trigger: ACGTAGTAGCTTTTTCATCAAGATTCGGCCTGGAGA...GAGCCACCAGTAGATGATTAGCCTCTGAGAACTGTCTCTGCAGCTACATGCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648181.1
ENST00000648891.1
CDS-3UTR CAA 90 bp CAATGCAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACATCTCCAGGCCGAATCTaGATGAAAAAGCTACTACGT +
Preference number: 5 (lower is better)
Translates to: QCRKAGFGQSIATPLYPTSPGRI*MKKLLR
Trigger: ACGTAGTAGCTTTTTCATCAAGATTCGGCCTGGAGA...TGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTGCATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp GGGCTCTTTCCCTCCCTCCTGTTGTTCATGTCTCACATGGGTACCAAAAGAAAAACTTTCATACTGCTCTaGCTCTCCAGGCCGAATCTT +
Preference number: 5 (lower is better)
Translates to: GLFPSLLLFMSHMGTKRKTFILL*LSRPNL
Trigger: AAGATTCGGCCTGGAGAGCAAGAGCAGTATGAAAGT...TTTTCTTTTGGTACCCATGTGAGACATGAACAACAGGAGGGAGGGAAAGAGCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp CAGCTGACAAGAGTCCTTGGAGGATTTCCCGAAGAATTCCATGGACCCTGTCAGCCACTGTATCGAAATTaGGATCCTAGCGCAAGAAAT +
Preference number: 5 (lower is better)
Translates to: QLTRVLGGFPEEFHGPCQPLYRN*DPSARN
Trigger: ATTTCTTGCGCTAGGATCCAAATTTCGATACAGTGG...CTGACAGGGTCCATGGAATTCTTCGGGAAATCCTCCAAGGACTCTTGTCAGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp CTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGTTGCCTGGTCTGAGCTaGAGTCCGGCCACTGTATCG +
Preference number: 5 (lower is better)
Translates to: LESLKSDYGRLASLSFCWLPGLS*SPATVS
Trigger: CGATACAGTGGCCGGACTCAAGCTCAGACCAGGCAA...CCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp AATCTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCGGGCTCTGGCTCAGCTaGCTCAGGTGGCTCGTCTTC +
Preference number: 5 (lower is better)
Translates to: NLESLKSDYGRLASLSFCGLWLS*LRWLVF
Trigger: GAAGACGAGCCACCTGAGCAAGCTGAGCCAGAGCCC...GCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp AAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAATACATACTGTGTTTGGTCACCATTaGAGGTGGGTACTGTCACCT +
Preference number: 5 (lower is better)
Translates to: KAGFGQSIATPLYPTIHTVFGHH*RWVLSP
Trigger: AGGTGACAGTACCCACCTCAAATGGTGACCAAACAC...AGTATGTATTGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp CAGAGACAGTTCTCAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTCCTATGTGTTTGGTCACCATTaGAGGTGGGTACTGTCACCT +
Preference number: 5 (lower is better)
Translates to: QRQFSEANHLLVAPNSSYVFGHH*RWVLSP
Trigger: AGGTGACAGTACCCACCTCAAATGGTGACCAAACAC...ATAGGAGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTGAGAACTGTCTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000648181.1
ENST00000648891.1
CDS-3UTR CAA 90 bp CAGCTGACAAGAGTCCTTGGAGGATTTCCCGAAGAATTCCATGGACCCTGTCAGTCACTTTTCACAGCATaGGCATTATCTGAGATGGTG +
Preference number: 5 (lower is better)
Translates to: QLTRVLGGFPEEFHGPCQSLFTA*ALSEMV
Trigger: CACCATCTCAGATAATGCCAATGCTGTGAAAAGTGA...CTGACAGGGTCCATGGAATTCTTCGGGAAATCCTCCAAGGACTCTTGTCAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp CTCCTTTGCCTCCTTGATGGCTTGTACAAGGACCTGATCATGGTCAATATCAGCCTCAGATGTGATAGTTaGAGCTGTCAGCAAGACTCC +
Preference number: 5 (lower is better)
Translates to: LLCLLDGLYKDLIMVNISLRCDS*SCQQDS
Trigger: GGAGTCTTGCTGACAGCTCAAACTATCACATCTGAG...GCTGATATTGACCATGATCAGGTCCTTGTACAAGCCATCAAGGAGGCAAAGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643155.1
CDS-3UTR CAA 90 bp GCCACATTCCTTGTCATTTGGGATGAAAGAAAGGCCCAGGATCAGACAGAAGTATTTTGCTGGTTTCTCTaGGATGGGAGAAGGGCAGAG +
Preference number: 5 (lower is better)
Translates to: ATFLVIWDERKAQDQTEVFCWFL*DGRRAE
Trigger: CTCTGCCCTTCTCCCATCCAAGAGAAACCAGCAAAA...TACTTCTGTCTGATCCTGGGCCTTTCTTTCATCCCAAATGACAAGGAATGTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp GCCACATTCCTTGTCATTTGGGATGAAAGAAAGGCCCAGGATCAGACAGAAGTACCCTGTCAGTGTCTGTaGGGGTTGGAAATAAATGGG +
Preference number: 5 (lower is better)
Translates to: ATFLVIWDERKAQDQTEVPCQCL*GLEING
Trigger: CCCATTTATTTCCAACCCCAACAGACACTGACAGGG...TACTTCTGTCTGATCCTGGGCCTTTCTTTCATCCCAAATGACAAGGAATGTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp TCCATTAGAGCTTTTGGCCCAAAGTGCCTATTTTTCTGTGAGATTTGGTCTCCTCCCACTAAGCTGGCTTaGGCTTCCAACACAGCTGAC +
Preference number: 5 (lower is better)
Translates to: SIRAFGPKCLFFCEIWSPPTKLA*ASNTAD
Trigger: GTCAGCTGTGTTGGAAGCCAAAGCCAGCTTAGTGGG...AGGAGACCAAATCTCACAGAAAAATAGGCACTTTGGGCCAAAAGCTCTAATGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp GTTGGGAGAAGCAGCTTTAGACATTTCTCTTGCTCACTGCCCTTGAGCCCCAGTGTTCCATTAGAGCTTTaGGCCCAAAGTGCCTATTTT +
Preference number: 5 (lower is better)
Translates to: VGRSSFRHFSCSLPLSPSVPLEL*AQSAYF
Trigger: AAAATAGGCACTTTGGGCCAAAAGCTCTAATGGAAC...ACTGGGGCTCAAGGGCAGTGAGCAAGAGAAATGTCTAAAGCTGCTTCTCCCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp GCCACATTCCTTGTCATTTGGGATGAAAGAAAGGCCCAGGATCAGACAGAAGTATTGAGGCCAATGTGTTaGTGGGAAGCAGTTGGAAGG +
Preference number: 5 (lower is better)
Translates to: ATFLVIWDERKAQDQTEVLRPMC*WEAVGR
Trigger: CCTTCCAACTGCTTCCCACAAACACATTGGCCTCAA...TACTTCTGTCTGATCCTGGGCCTTTCTTTCATCCCAAATGACAAGGAATGTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp GCCACATTCCTTGTCATTTGGGATGAAAGAAAGGCCCAGGATCAGACAGAAGTAAGACTTTGGACGGTGTaGGGAGAAGCAGCTTTAGAC +
Preference number: 5 (lower is better)
Translates to: ATFLVIWDERKAQDQTEVRLWTV*GEAALD
Trigger: GTCTAAAGCTGCTTCTCCCAACACCGTCCAAAGTCT...TACTTCTGTCTGATCCTGGGCCTTTCTTTCATCCCAAATGACAAGGAATGTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp CTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGCAGGCAGTGGAGACTTaGGACGGTGTTGGGAGAAGC +
Preference number: 5 (lower is better)
Translates to: LESLKSDYGRLASLSFCWQAVET*DGVGRS
Trigger: GCTTCTCCCAACACCGTCCAAAGTCTCCACTGCCTG...CCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp GCCACATTCCTTGTCATTTGGGATGAAAGAAAGGCCCAGGATCAGACAGAAGTATTTCCCTCCCTCCTGTaGTTCATGTCTCACATGGGT +
Preference number: 5 (lower is better)
Translates to: ATFLVIWDERKAQDQTEVFPSLL*FMSHMG
Trigger: ACCCATGTGAGACATGAACAACAGGAGGGAGGGAAA...TACTTCTGTCTGATCCTGGGCCTTTCTTTCATCCCAAATGACAAGGAATGTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp AATCTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCGCAACACGACCAGGCTaGGGCACTACCCCAAAGCCC +
Preference number: 5 (lower is better)
Translates to: NLESLKSDYGRLASLSFCATRPG*GTTPKP
Trigger: GGGCTTTGGGGTAGTGCCCAAGCCTGGTCGTGTTGC...GCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp GCCACATTCCTTGTCATTTGGGATGAAAGAAAGGCCCAGGATCAGACAGAAGTAAAACCCCAAGAACTGTaGCCAGAGATGGAGGAAAGG +
Preference number: 5 (lower is better)
Translates to: ATFLVIWDERKAQDQTEVKPQEL*PEMEER
Trigger: CCTTTCCTCCATCTCTGGCAACAGTTCTTGGGGTTT...TACTTCTGTCTGATCCTGGGCCTTTCTTTCATCCCAAATGACAAGGAATGTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR CAA 90 bp CCAACACAGCTGACAAGAGTCCTTGGAGGATTTCCCGAAGAATTCCATGGACCCGAGTCCTCATGTGGCTaGGAGGAAATCTTTATTTCT +
Preference number: 5 (lower is better)
Translates to: PTQLTRVLGGFPEEFHGPESSCG*EEIFIS
Trigger: AGAAATAAAGATTTCCTCCAAGCCACATGAGGACTC...GGGTCCATGGAATTCTTCGGGAAATCCTCCAAGGACTCTTGTCAGCTGTGTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR CAA 90 bp CTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGAGTTCCCGAGGTTTGTaGTCTCCTCACCCCCAGCTG +
Preference number: 5 (lower is better)
Translates to: LESLKSDYGRLASLSFCWSSRGL*SPHPQL
Trigger: CAGCTGGGGGTGAGGAGACAACAAACCTCGGGAACT...CCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR CAA 90 bp TCTATACACCAGGCAGGAAAAAGTTGTCTGTCCCTGTACAGCTCAGAAATACTCGCAGAAAAGCTGGCTTaGGGCAGTCCATTGCTACTC +
Preference number: 5 (lower is better)
Translates to: SIHQAGKSCLSLYSSEILAEKLA*GSPLLL
Trigger: GAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTGC...GAGTATTTCTGAGCTGTACAGGGACAGACAACTTTTTCCTGCCTGGTGTATAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp ATGTTGCCCAGGCTGGTCTTAAACTACTGGACTCAAGTGATCTGCCTGTCTTGGGGCTTAGGGGCCTCCTaGGTTTACTATATAATTGTG +
Preference number: 5 (lower is better)
Translates to: MLPRLVLNYWTQVICLSWGLGAS*VYYIIV
Trigger: CACAATTATATAGTAAACCAAGGAGGCCCCTAAGCC...CCAAGACAGGCAGATCACTTGAGTCCAGTAGTTTAAGACCAGCCTGGGCAACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000645184.1
ENST00000648181.1
CDS TCA 90 bp CTACTTCTTTGCCTTCTTCCTCGGACACCTGAGATTTGGGCCTTTTaGGAAACGAGGAGAATAGTCGTGAAAGTCCTCTGCTTTCTGATG +
Preference number: 5 (lower is better)
Translates to: LLLCLLPRTPEIWAF*ETRRIVVKVLCFLM
Trigger: CATCAGAAAGCAGAGGACTTTCACGACTATTCTCCTCGTTTCTCAAAAGGCCCAAATCTCAGGTGTCCGAGGAAGAAGGCAAAGAAGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 29 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373797.2
ENST00000373798.5
ENST00000373800.7
ENST00000482464.6
ENST00000642643.1
ENST00000642937.2
ENST00000643155.1
ENST00000643173.1
ENST00000643302.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000645111.1
ENST00000645184.1
ENST00000645999.1
ENST00000646189.1
ENST00000646260.1
ENST00000646800.1
ENST00000647103.1
ENST00000647918.1
ENST00000648181.1
ENST00000648891.1
ENST00000649674.1
ENST00000649717.1
ENST00000650265.1
CDS TCA 90 bp TTGGCGGAATCCAGCCATGTCTGTGTTTCTGCACTGCTTAATGAATaGAGATCCAAAGATGGGTCTGTTTTGAGTTCCGGTTCAGGAGCT +
Preference number: 5 (lower is better)
Translates to: LAESSHVCVSALLNE*RSKDGSVLSSGSGA
Trigger: AGCTCCTGAACCGGAACTCAAAACAGACCCATCTTTGGATCTTCATTCATTAAGCAGTGCAGAAACACAGACATGGCTGGATTCCGCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648181.1
CDS GCA 90 bp CAGAATTATTGCTCCAGCAACCCAGTCAACGATTCCAGAAGCATTTaGATGCAATCTCTTCCACCCCCTCTTCTCTGCAGCTTTACTGTT +
Preference number: 5 (lower is better)
Translates to: QNYCSSNPVNDSRSI*MQSLPPPLLCSFTV
Trigger: AACAGTAAAGCTGCAGAGAAGAGGGGGTGGAAGAGATTGCATGCAAATGCTTCTGGAATCGTTGACTGGGTTGCTGGAGCAATAATTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649674.1
CDS-3UTR CAA 90 bp GCCACATTCCTTGTCATTTGGGATGAAAGAAAGGCCCAGGATCAGACAGAAGTAGTCCGCTCCTTGTTCTaGGTCAAGTCTTCATGTGTA +
Preference number: 5 (lower is better)
Translates to: ATFLVIWDERKAQDQTEVVRSLF*VKSSCV
Trigger: TACACATGAAGACTTGACCAAGAACAAGGAGCGGAC...TACTTCTGTCTGATCCTGGGCCTTTCTTTCATCCCAAATGACAAGGAATGTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp CAGAGACAGTTCTCAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTCCTATTCTGATGTCCGCTCCTaGTTCTTGGTCAAGTCTTCA +
Preference number: 5 (lower is better)
Translates to: QRQFSEANHLLVAPNSSYSDVRS*FLVKSS
Trigger: TGAAGACTTGACCAAGAACAAGGAGCGGACATCAGA...ATAGGAGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTGAGAACTGTCTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648181.1
ENST00000648891.1
CDS-3UTR CAA 90 bp GCCACATTCCTTGTCATTTGGGATGAAAGAAAGGCCCAGGATCAGACAGAAGTATCTGATGTCCGCTCCTaGTTCTTGGTCAAGTCTTCA +
Preference number: 5 (lower is better)
Translates to: ATFLVIWDERKAQDQTEVSDVRS*FLVKSS
Trigger: TGAAGACTTGACCAAGAACAAGGAGCGGACATCAGA...TACTTCTGTCTGATCCTGGGCCTTTCTTTCATCCCAAATGACAAGGAATGTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp CAGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAGAAGTTCAATGTCTGACTCTACTTCTTaGCCTTCTTCCTCGGACACC +
Preference number: 5 (lower is better)
Translates to: QRASYSNNTVEAKDRSSMSDSTS*PSSSDT
Trigger: GGTGTCCGAGGAAGAAGGCAAAGAAGTAGAGTCAGA...CATTGAACTTCTGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp TCTATACACCAGGCAGGAAAAAGTTGTCTGTCCCTGTACAGCTCAGAAATACTCTCTGACTCTACTTCTTaGCCTTCTTCCTCGGACACC +
Preference number: 5 (lower is better)
Translates to: SIHQAGKSCLSLYSSEILSDSTS*PSSSDT
Trigger: GGTGTCCGAGGAAGAAGGCAAAGAAGTAGAGTCAGA...GAGTATTTCTGAGCTGTACAGGGACAGACAACTTTTTCCTGCCTGGTGTATAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp GCCACATTCCTTGTCATTTGGGATGAAAGAAAGGCCCAGGATCAGACAGAAGTAAAAGATGGGTCTGTTTaGAGTTCCGGTTCAGGAGCT +
Preference number: 5 (lower is better)
Translates to: ATFLVIWDERKAQDQTEVKDGSV*SSGSGA
Trigger: AGCTCCTGAACCGGAACTCAAAACAGACCCATCTTT...TACTTCTGTCTGATCCTGGGCCTTTCTTTCATCCCAAATGACAAGGAATGTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp CAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAATACATCCAACAAAGAAACCTaGCAGTGCATGTTCCTGTGT +
Preference number: 5 (lower is better)
Translates to: QKSWLWAVHCYSFVPHNTSNKET*QCMFLC
Trigger: ACACAGGAACATGCACTGCAAGGTTTCTTTGTTGGA...TGTATTGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp GGCTCAGCTTGCTCAGGTGGCTCGTCTTCCTTTTTCACTTCAGCCTTCACTGTTTCGTTTAAGCAAATCTaGTCCCTTAGCATGTTTCTC +
Preference number: 5 (lower is better)
Translates to: GSACSGGSSSFFTSAFTVSFKQI*SLSMFL
Trigger: GAGAAACATGCTAAGGGACAAGATTTGCTTAAACGA...AACAGTGAAGGCTGAAGTGAAAAAGGAAGACGAGCCACCTGAGCAAGCTGAGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
CDS-3UTR CAA 90 bp GGGCTCTTTCCCTCCCTCCTGTTGTTCATGTCTCACATGGGTACCAAAAGAAAACTAATAATGCTAAGGTaGCAAAGGAACAGGGCAGAC +
Preference number: 5 (lower is better)
Translates to: GLFPSLLLFMSHMGTKRKLIMLR*QRNRAD
Trigger: GTCTGCCCTGTTCCTTTGCAACCTTAGCATTATTAG...TTTTCTTTTGGTACCCATGTGAGACATGAACAACAGGAGGGAGGGAAAGAGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp TCCAAAGGGGATAAGACTAGGGAGAGACGCGGAAGTCCCACTAAGCTGGCTTTGTACATAGACAACTTTTaGGCATTCTCAAGAAACTCC +
Preference number: 5 (lower is better)
Translates to: SKGDKTRERRGSPTKLALYIDNF*AFSRNS
Trigger: GGAGTTTCTTGAGAATGCCAAAAAGTTGTCTATGTA...CAAAGCCAGCTTAGTGGGACTTCCGCGTCTCTCCCTAGTCTTATCCCCTTTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp GAAGCATGTAGCTGCAGAGACAGTTCTCAGAGGCTAATCATCTACTGGTGGCTCCTCCTTCCAAGTCCTTaGCTTTATGAAGATCAACTC +
Preference number: 5 (lower is better)
Translates to: EACSCRDSSQRLIIYWWLLLPSP*LYEDQL
Trigger: GAGTTGATCTTCATAAAGCAAAGGACTTGGAAGGAG...GAGCCACCAGTAGATGATTAGCCTCTGAGAACTGTCTCTGCAGCTACATGCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000645184.1
ENST00000648181.1
ENST00000648891.1
CDS-3UTR CAA 90 bp AAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAATACATACTACTTTCATACTGCTCTaGCTCTCCAGGCCGAATCTT +
Preference number: 5 (lower is better)
Translates to: KAGFGQSIATPLYPTIHTTFILL*LSRPNL
Trigger: AAGATTCGGCCTGGAGAGCAAGAGCAGTATGAAAGT...AGTATGTATTGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp CAGAGACAGTTCTCAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTCCTATACTTTCATACTGCTCTaGCTCTCCAGGCCGAATCTT +
Preference number: 5 (lower is better)
Translates to: QRQFSEANHLLVAPNSSYTFILL*LSRPNL
Trigger: AAGATTCGGCCTGGAGAGCAAGAGCAGTATGAAAGT...ATAGGAGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTGAGAACTGTCTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648181.1
CDS-3UTR CAA 90 bp CCAACACAGCTGACAAGAGTCCTTGGAGGATTTCCCGAAGAATTCCATGGACCCGCAAGAAATTTGCTTTaGGGAATGGTGTCTGTAGAT +
Preference number: 5 (lower is better)
Translates to: PTQLTRVLGGFPEEFHGPARNLL*GMVSVD
Trigger: ATCTACAGACACCATTCCCAAAAGCAAATTTCTTGC...GGGTCCATGGAATTCTTCGGGAAATCCTCCAAGGACTCTTGTCAGCTGTGTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp GGGCTCTTTCCCTCCCTCCTGTTGTTCATGTCTCACATGGGTACCAAAAGAAAACCTAGCGCAAGAAATTaGCTTTTGGGAATGGTGTCT +
Preference number: 5 (lower is better)
Translates to: GLFPSLLLFMSHMGTKRKPSARN*LLGMVS
Trigger: AGACACCATTCCCAAAAGCAAATTTCTTGCGCTAGG...TTTTCTTTTGGTACCCATGTGAGACATGAACAACAGGAGGGAGGGAAAGAGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp CCCTTGTCATGTGGTGTCTTGTGGGGAGAACGGCTCCTAAAAGTCAATTCCTTGCCACTGTATCGAAATTaGGATCCTAGCGCAAGAAAT +
Preference number: 5 (lower is better)
Translates to: PLSCGVLWGERLLKVNSLPLYRN*DPSARN
Trigger: ATTTCTTGCGCTAGGATCCAAATTTCGATACAGTGG...CAAGGAATTGACTTTTAGGAGCCGTTCTCCCCACAAGACACCACATGACAAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp GAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGTTTTTGCCTGGTCTGAGCTaGAGTCCGGCCACTGTATCG +
Preference number: 5 (lower is better)
Translates to: ESLKSDYGRLASLSFCWFLPGLS*SPATVS
Trigger: CGATACAGTGGCCGGACTCAAGCTCAGACCAGGCAA...AAACCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp AGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAGTCAAGACATTGCCTGGTCTGAGCTaGAGTCCGGCCACTGTATCG +
Preference number: 5 (lower is better)
Translates to: RSFYSPCNFCTLLSIVKTLPGLS*SPATVS
Trigger: CGATACAGTGGCCGGACTCAAGCTCAGACCAGGCAA...TGTCTTGACTATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR CAA 90 bp GTCCAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATATTGCCTGGTCTGAGCTaGAGTCCGGCCACTGTATCG +
Preference number: 5 (lower is better)
Translates to: VQLRSFYSPCNFCTLLSILPGLS*SPATVS
Trigger: CGATACAGTGGCCGGACTCAAGCTCAGACCAGGCAA...TATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR CAA 90 bp GGATCAATGAGATCTAGAAGAATCTCTTGGTATAAACTCCCAATAGAAACTGAAGGGCTCTGGCTCAGCTaGCTCAGGTGGCTCGTCTTC +
Preference number: 5 (lower is better)
Translates to: GSMRSRRISWYKLPIETEGLWLS*LRWLVF
Trigger: GAAGACGAGCCACCTGAGCAAGCTGAGCCAGAGCCC...TTCAGTTTCTATTGGGAGTTTATACCAAGAGATTCTTCTAGATCTCATTGATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp GAGACATTAACCAAATCATCCATATTGGTACATTCAAGTGCCATAAAAAGCAAGGGGCTCTGGCTCAGCTaGCTCAGGTGGCTCGTCTTC +
Preference number: 5 (lower is better)
Translates to: ETLTKSSILVHSSAIKSKGLWLS*LRWLVF
Trigger: GAAGACGAGCCACCTGAGCAAGCTGAGCCAGAGCCC...CTTGCTTTTTATGGCACTTGAATGTACCAATATGGATGATTTGGTTAATGTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp GACATTAACCAAATCATCCATATTGGTACATTCAAGTGCCATAAAAAGCAAGCTGGGCTCTGGCTCAGCTaGCTCAGGTGGCTCGTCTTC +
Preference number: 5 (lower is better)
Translates to: DINQIIHIGTFKCHKKQAGLWLS*LRWLVF
Trigger: GAAGACGAGCCACCTGAGCAAGCTGAGCCAGAGCCC...AGCTTGCTTTTTATGGCACTTGAATGTACCAATATGGATGATTTGGTTAATGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp CTCTTTCCCTCCCTCCTGTTGTTCATGTCTCACATGGGTACCAAAAGAAAAATGGTGTTTGGTCACCATTaGAGGTGGGTACTGTCACCT +
Preference number: 5 (lower is better)
Translates to: LFPSLLLFMSHMGTKRKMVFGHH*RWVLSP
Trigger: AGGTGACAGTACCCACCTCAAATGGTGACCAAACAC...CATTTTTCTTTTGGTACCCATGTGAGACATGAACAACAGGAGGGAGGGAAAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
CDS-3UTR CAA 90 bp CAGAGACAGTTCTCAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTCCTATGTGGGGATTTGCCCATaGATGTTAAGAGTTCGGAAG +
Preference number: 5 (lower is better)
Translates to: QRQFSEANHLLVAPNSSYVGICP*MLRVRK
Trigger: CTTCCGAACTCTTAACATCAATGGGCAAATCCCCAC...ATAGGAGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTGAGAACTGTCTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648181.1
ENST00000648891.1
CDS-3UTR CAA 90 bp TTCACAATTGGTCATGTGGACAAAGTACTCACTCCTTCTCCTGTGGGGATTTGCGTGGGGATTTGCCCATaGATGTTAAGAGTTCGGAAG +
Preference number: 5 (lower is better)
Translates to: FTIGHVDKVLTPSPVGICVGICP*MLRVRK
Trigger: CTTCCGAACTCTTAACATCAATGGGCAAATCCCCAC...GCAAATCCCCACAGGAGAAGGAGTGAGTACTTTGTCCACATGACCAATTGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642643.1
ENST00000648891.1
CDS-3UTR CAA 90 bp AGGCCGTGGTTCTGGTACAGACTCCATGAAGTTCTTTTTCAGCTCACTGATGCTTTCTCCTGTGGGGATTaGCCCATTGATGTTAAGAGT +
Preference number: 5 (lower is better)
Translates to: RPWFWYRLHEVLFQLTDAFSCGD*PIDVKS
Trigger: ACTCTTAACATCAATGGGCAAATCCCCACAGGAGAA...AGCATCAGTGAGCTGAAAAAGAACTTCATGGAGTCTGTACCAGAACCACGGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
CDS-3UTR CAA 90 bp CAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAATACATTCTCCTGTGGGGATTaGCCCATTGATGTTAAGAGT +
Preference number: 5 (lower is better)
Translates to: QKSWLWAVHCYSFVPHNTFSCGD*PIDVKS
Trigger: ACTCTTAACATCAATGGGCAAATCCCCACAGGAGAA...TGTATTGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp GAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGTTTTCCAAGTCTCCACTGTaGTCGTCAGTCTGGGCAGCC +
Preference number: 5 (lower is better)
Translates to: ESLKSDYGRLASLSFCWFSKSPL*SSVWAA
Trigger: GGCTGCCCAGACTGACGACAACAGTGGAGACTTGGA...AAACCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp GGGCTCTTTCCCTCCCTCCTGTTGTTCATGTCTCACATGGGTACCAAAAGAAAATACAGTCTTGGTAATTaGAGTTGTGGTGGTGCTGCT +
Preference number: 5 (lower is better)
Translates to: GLFPSLLLFMSHMGTKRKYSLGN*SCGGAA
Trigger: AGCAGCACCACCACAACTCAAATTACCAAGACTGTA...TTTTCTTTTGGTACCCATGTGAGACATGAACAACAGGAGGGAGGGAAAGAGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp GAAGCTGGAACTGGGATTCTAAGGAGCCTTGAGGCCAATGTGTTTGTGGGAAGCAGCTTCTTTATCATTTaGCTGGTTTCTCTTGGATGG +
Preference number: 5 (lower is better)
Translates to: EAGTGILRSLEANVFVGSSFFII*LVSLGW
Trigger: CCATCCAAGAGAAACCAGCAAAATGATAAAGAAGCT...GCTTCCCACAAACACATTGGCCTCAAGGCTCCTTAGAATCCCAGTTCCAGCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp TCCATTAGAGCTTTTGGCCCAAAGTGCCTATTTTTCTGTGAGATTTGGTCTCCTTGGGGCTTATACCCCTaGTCATGTGGTGTCTTGTGG +
Preference number: 5 (lower is better)
Translates to: SIRAFGPKCLFFCEIWSPWGLYP*SCGVLW
Trigger: CCACAAGACACCACATGACAAGGGGTATAAGCCCCA...AGGAGACCAAATCTCACAGAAAAATAGGCACTTTGGGCCAAAAGCTCTAATGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp CTCTTTCCCTCCCTCCTGTTGTTCATGTCTCACATGGGTACCAAAAGAAAAATGTTGAGGCCAATGTGTTaGTGGGAAGCAGTTGGAAGG +
Preference number: 5 (lower is better)
Translates to: LFPSLLLFMSHMGTKRKMLRPMC*WEAVGR
Trigger: CCTTCCAACTGCTTCCCACAAACACATTGGCCTCAA...CATTTTTCTTTTGGTACCCATGTGAGACATGAACAACAGGAGGGAGGGAAAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp AAAAATGCACACACCCGAAATGAGTTCAAACCAGCCGAAACAAAACTCAGGCAGCCCATCTTGCTGGGCTaGTCCAAATCTATGGCTTCT +
Preference number: 5 (lower is better)
Translates to: KNAHTRNEFKPAETKLRQPILLG*SKSMAS
Trigger: AGAAGCCATAGATTTGGACAAGCCCAGCAAGATGGG...CTGCCTGAGTTTTGTTTCGGCTGGTTTGAACTCATTTCGGGTGTGTGCATTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR CAA 90 bp TCCATTAGAGCTTTTGGCCCAAAGTGCCTATTTTTCTGTGAGATTTGGTCTCCTGGAAGGACACCCATCTaGCTGGGCTTGTCCAAATCT +
Preference number: 5 (lower is better)
Translates to: SIRAFGPKCLFFCEIWSPGRTPI*LGLSKS
Trigger: AGATTTGGACAAGCCCAGCAAGATGGGTGTCCTTCC...AGGAGACCAAATCTCACAGAAAAATAGGCACTTTGGGCCAAAAGCTCTAATGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR CAA 90 bp CTCTTTCCCTCCCTCCTGTTGTTCATGTCTCACATGGGTACCAAAAGAAAAATGAAACCCCAAGAACTGTaGCCAGAGATGGAGGAAAGG +
Preference number: 5 (lower is better)
Translates to: LFPSLLLFMSHMGTKRKMKPQEL*PEMEER
Trigger: CCTTTCCTCCATCTCTGGCAACAGTTCTTGGGGTTT...CATTTTTCTTTTGGTACCCATGTGAGACATGAACAACAGGAGGGAGGGAAAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR CAA 90 bp CCCTTGTCATGTGGTGTCTTGTGGGGAGAACGGCTCCTAAAAGTCAATTCCTTGGAGTCCTCATGTGGCTaGGAGGAAATCTTTATTTCT +
Preference number: 5 (lower is better)
Translates to: PLSCGVLWGERLLKVNSLESSCG*EEIFIS
Trigger: AGAAATAAAGATTTCCTCCAAGCCACATGAGGACTC...CAAGGAATTGACTTTTAGGAGCCGTTCTCCCCACAAGACACCACATGACAAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR CAA 90 bp GGGCTCTTTCCCTCCCTCCTGTTGTTCATGTCTCACATGGGTACCAAAAGAAAAGCCAAAACAGCAGACTaGATTATTGCCTGTGTAGTC +
Preference number: 5 (lower is better)
Translates to: GLFPSLLLFMSHMGTKRKAKTAD*IIACVV
Trigger: GACTACACAGGCAATAATCAAGTCTGCTGTTTTGGC...TTTTCTTTTGGTACCCATGTGAGACATGAACAACAGGAGGGAGGGAAAGAGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR CAA 90 bp AATCTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTCTGTTGTCATGATGTaGCTGGGCTGGGTGCGGCGG +
Preference number: 5 (lower is better)
Translates to: NLESLKSDYGRLASLSFCSVVMM*LGWVRR
Trigger: CCGCCGCACCCAGCCCAGCAACATCATGACAACAGA...GCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347529.7
ENST00000643155.1
CDS-3UTR CAA 90 bp GAAGCATGTAGCTGCAGAGACAGTTCTCAGAGGCTAATCATCTACTGGTGGCTCCCTCCATTTTCACAATaGGTCATGTGGACAAAGTAC +
Preference number: 5 (lower is better)
Translates to: EACSCRDSSQRLIIYWWLPPFSQ*VMWTKY
Trigger: GTACTTTGTCCACATGACCAATTGTGAAAATGGAGG...GAGCCACCAGTAGATGATTAGCCTCTGAGAACTGTCTCTGCAGCTACATGCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648181.1
ENST00000648891.1
CDS-3UTR CAA 90 bp CAATGCAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAAGAGAGTATCCTGGTTaGTGTGAGATATTGGATAGG +
Preference number: 5 (lower is better)
Translates to: QCRKAGFGQSIATPLYPTREYPG*CEILDR
Trigger: CCTATCCAATATCTCACACAAACCAGGATACTCTCT...TGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTGCATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp TTAAACTTCAATGCAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTCCAGGCAGGAAAAAGTaGTCTGTCCCTGTACAGCTC +
Preference number: 5 (lower is better)
Translates to: LNFNAEKLALGSPLLLLCPGRKK*SVPVQL
Trigger: GAGCTGTACAGGGACAGACAACTTTTTCCTGCCTGG...ACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTGCATTGAAGTTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp CAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAATACAACAGAGGACACATACTaGTCACAAGTGAACTTGAGG +
Preference number: 5 (lower is better)
Translates to: QKSWLWAVHCYSFVPHNTTEDTY*SQVNLR
Trigger: CCTCAAGTTCACTTGTGACAAGTATGTGTCCTCTGT...TGTATTGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp CAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAATACACCTTCTCTGATCAGTTaGGAAGTTCAACACTGGTTC +
Preference number: 5 (lower is better)
Translates to: QKSWLWAVHCYSFVPHNTPSLIS*EVQHWF
Trigger: GAACCAGTGTTGAACTTCCAAACTGATCAGAGAAGG...TGTATTGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS TCA 90 bp GGTTCAGGTACCTTTACCTTCGGAATAACAATAGCTCCATTTAACTaGGCTCACCATGTGCCACCAGCTGTTCATCCAGTATTTCACCTG +
Preference number: 5 (lower is better)
Translates to: GSGTFTFGITIAPFN*AHHVPPAVHPVFHL
Trigger: CAGGTGAAATACTGGATGAACAGCTGGTGGCACATGGTGAGCTCAGTTAAATGGAGCTATTGTTATTCCGAAGGTAAAGGTACCTGAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649674.1
CDS-3UTR CAA 90 bp GGCAGGAAAAAGTTGTCTGTCCCTGTACAGCTCAGAAATACTCATAAAAAGGCCGTCCGCTCCTTGTTCTaGGTCAAGTCTTCATGTGTA +
Preference number: 5 (lower is better)
Translates to: GRKKLSVPVQLRNTHKKAVRSLF*VKSSCV
Trigger: TACACATGAAGACTTGACCAAGAACAAGGAGCGGAC...GGCCTTTTTATGAGTATTTCTGAGCTGTACAGGGACAGACAACTTTTTCCTGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp CAGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAGAAGTTCAATGGTCCGCTCCTTGTTCTaGGTCAAGTCTTCATGTGTA +
Preference number: 5 (lower is better)
Translates to: QRASYSNNTVEAKDRSSMVRSLF*VKSSCV
Trigger: TACACATGAAGACTTGACCAAGAACAAGGAGCGGAC...CATTGAACTTCTGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp AGAAGTCAACATGCAAACAGAGGACACATACTTGTCACAAGTGAACTTGAGGTCTCTGACTCTACTTCTTaGCCTTCTTCCTCGGACACC +
Preference number: 5 (lower is better)
Translates to: RSQHANRGHILVTSELEVSDSTS*PSSSDT
Trigger: GGTGTCCGAGGAAGAAGGCAAAGAAGTAGAGTCAGA...GACCTCAAGTTCACTTGTGACAAGTATGTGTCCTCTGTTTGCATGTTGACTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp TTAGGGGCCTCCTTGGTTTACTATATAATTGTGGGGAACCAGTCCAGATATTTCTCTGACTCTACTTCTTaGCCTTCTTCCTCGGACACC +
Preference number: 5 (lower is better)
Translates to: LGASLVYYIIVGNQSRYFSDSTS*PSSSDT
Trigger: GGTGTCCGAGGAAGAAGGCAAAGAAGTAGAGTCAGA...GAAATATCTGGACTGGTTCCCCACAATTATATAGTAAACCAAGGAGGCCCCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000645184.1
ENST00000648181.1
CDS-3UTR CAA 90 bp AAAAATGCACACACCCGAAATGAGTTCAAACCAGCCGAAACAAAACTCAGGCAGAAAGATGGGTCTGTTTaGAGTTCCGGTTCAGGAGCT +
Preference number: 5 (lower is better)
Translates to: KNAHTRNEFKPAETKLRQKDGSV*SSGSGA
Trigger: AGCTCCTGAACCGGAACTCAAAACAGACCCATCTTT...CTGCCTGAGTTTTGTTTCGGCTGGTTTGAACTCATTTCGGGTGTGTGCATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp AGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAGAAGTTCAATGGAAAGATGGGTCTGTTTaGAGTTCCGGTTCAGGAGCT +
Preference number: 5 (lower is better)
Translates to: RGHHTAITQLKPRTEVQWKDGSV*SSGSGA
Trigger: AGCTCCTGAACCGGAACTCAAAACAGACCCATCTTT...CCATTGAACTTCTGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp CAGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAGAAGTTCAATGAAAGATGGGTCTGTTTaGAGTTCCGGTTCAGGAGCT +
Preference number: 5 (lower is better)
Translates to: QRASYSNNTVEAKDRSSMKDGSV*SSGSGA
Trigger: AGCTCCTGAACCGGAACTCAAAACAGACCCATCTTT...CATTGAACTTCTGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp TCTATACACCAGGCAGGAAAAAGTTGTCTGTCCCTGTACAGCTCAGAAATACTCAAAGATGGGTCTGTTTaGAGTTCCGGTTCAGGAGCT +
Preference number: 5 (lower is better)
Translates to: SIHQAGKSCLSLYSSEILKDGSV*SSGSGA
Trigger: AGCTCCTGAACCGGAACTCAAAACAGACCCATCTTT...GAGTATTTCTGAGCTGTACAGGGACAGACAACTTTTTCCTGCCTGGTGTATAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp GAAGCTGGAACTGGGATTCTAAGGAGCCTTGAGGCCAATGTGTTTGTGGGAAGCTCTTTTACTTCTATTTaGGAGCACTCTTCAAGTCCT +
Preference number: 5 (lower is better)
Translates to: EAGTGILRSLEANVFVGSSFTSI*EHSSSP
Trigger: AGGACTTGAAGAGTGCTCCAAAATAGAAGTAAAAGA...GCTTCCCACAAACACATTGGCCTCAAGGCTCCTTAGAATCCCAGTTCCAGCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp GTTGGGAGAAGCAGCTTTAGACATTTCTCTTGCTCACTGCCCTTGAGCCCCAGTATTCTGTTTCTGCTTTaGATTGAGGGCTTTCTTCTT +
Preference number: 5 (lower is better)
Translates to: VGRSSFRHFSCSLPLSPSILFLL*IEGFLL
Trigger: AAGAAGAAAGCCCTCAATCAAAAGCAGAAACAGAAT...ACTGGGGCTCAAGGGCAGTGAGCAAGAGAAATGTCTAAAGCTGCTTCTCCCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp CAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTCCTATAATTGCACTGGGTTCCAACAAAGAAACCTaGCAGTGCATGTTCCTGTGT +
Preference number: 5 (lower is better)
Translates to: QRLIIYWWLQIAPIIALGSNKET*QCMFLC
Trigger: ACACAGGAACATGCACTGCAAGGTTTCTTTGTTGGA...ACCCAGTGCAATTATAGGAGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648891.1
CDS-3UTR CAA 90 bp GCCACATTCCTTGTCATTTGGGATGAAAGAAAGGCCCAGGATCAGACAGAAGTATCCAACAAAGAAACCTaGCAGTGCATGTTCCTGTGT +
Preference number: 5 (lower is better)
Translates to: ATFLVIWDERKAQDQTEVSNKET*QCMFLC
Trigger: ACACAGGAACATGCACTGCAAGGTTTCTTTGTTGGA...TACTTCTGTCTGATCCTGGGCCTTTCTTTCATCCCAAATGACAAGGAATGTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp CCCTTGTCATGTGGTGTCTTGTGGGGAGAACGGCTCCTAAAAGTCAATTCCTTGTCGTTTAAGCAAATCTaGTCCCTTAGCATGTTTCTC +
Preference number: 5 (lower is better)
Translates to: PLSCGVLWGERLLKVNSLSFKQI*SLSMFL
Trigger: GAGAAACATGCTAAGGGACAAGATTTGCTTAAACGA...CAAGGAATTGACTTTTAGGAGCCGTTCTCCCCACAAGACACCACATGACAAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp CAGAGACAGTTCTCAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTCCTATCTAATAATGCTAAGGTaGCAAAGGAACAGGGCAGAC +
Preference number: 5 (lower is better)
Translates to: QRQFSEANHLLVAPNSSYLIMLR*QRNRAD
Trigger: GTCTGCCCTGTTCCTTTGCAACCTTAGCATTATTAG...ATAGGAGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTGAGAACTGTCTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648181.1
ENST00000648891.1
CDS-3UTR CAA 90 bp CAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTCCTATAATTGCACTGGGTCTAATAATGCTAAGGTaGCAAAGGAACAGGGCAGAC +
Preference number: 5 (lower is better)
Translates to: QRLIIYWWLQIAPIIALGLIMLR*QRNRAD
Trigger: GTCTGCCCTGTTCCTTTGCAACCTTAGCATTATTAG...ACCCAGTGCAATTATAGGAGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648181.1
ENST00000648891.1
CDS-3UTR CAA 90 bp GGGCTCTTTCCCTCCCTCCTGTTGTTCATGTCTCACATGGGTACCAAAAGAAAACTCCTTCCAAGTCCTTaGCTTTATGAAGATCAACTC +
Preference number: 5 (lower is better)
Translates to: GLFPSLLLFMSHMGTKRKLLPSP*LYEDQL
Trigger: GAGTTGATCTTCATAAAGCAAAGGACTTGGAAGGAG...TTTTCTTTTGGTACCCATGTGAGACATGAACAACAGGAGGGAGGGAAAGAGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp ACTTTCATACTGCTCTTGCTCTCCAGGCCGAATCTTGATGAAAAAGCTACTACGACTTTCATACTGCTCTaGCTCTCCAGGCCGAATCTT +
Preference number: 5 (lower is better)
Translates to: TFILLLLSRPNLDEKATTTFILL*LSRPNL
Trigger: AAGATTCGGCCTGGAGAGCAAGAGCAGTATGAAAGT...CGTAGTAGCTTTTTCATCAAGATTCGGCCTGGAGAGCAAGAGCAGTATGAAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642643.1
ENST00000643155.1
CDS-3UTR CAA 90 bp AGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAGAAGTTCAATGGACTTTCATACTGCTCTaGCTCTCCAGGCCGAATCTT +
Preference number: 5 (lower is better)
Translates to: RGHHTAITQLKPRTEVQWTFILL*LSRPNL
Trigger: AAGATTCGGCCTGGAGAGCAAGAGCAGTATGAAAGT...CCATTGAACTTCTGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp CAGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAGAAGTTCAATGACTTTCATACTGCTCTaGCTCTCCAGGCCGAATCTT +
Preference number: 5 (lower is better)
Translates to: QRASYSNNTVEAKDRSSMTFILL*LSRPNL
Trigger: AAGATTCGGCCTGGAGAGCAAGAGCAGTATGAAAGT...CATTGAACTTCTGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp AAAAATGCACACACCCGAAATGAGTTCAAACCAGCCGAAACAAAACTCAGGCAGACTTTCATACTGCTCTaGCTCTCCAGGCCGAATCTT +
Preference number: 5 (lower is better)
Translates to: KNAHTRNEFKPAETKLRQTFILL*LSRPNL
Trigger: AAGATTCGGCCTGGAGAGCAAGAGCAGTATGAAAGT...CTGCCTGAGTTTTGTTTCGGCTGGTTTGAACTCATTTCGGGTGTGTGCATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp CCGTGGTTCTGGTACAGACTCCATGAAGTTCTTTTTCAGCTCACTGATGCTGGCGCAAGAAATTTGCTTTaGGGAATGGTGTCTGTAGAT +
Preference number: 5 (lower is better)
Translates to: PWFWYRLHEVLFQLTDAGARNLL*GMVSVD
Trigger: ATCTACAGACACCATTCCCAAAAGCAAATTTCTTGC...GCCAGCATCAGTGAGCTGAAAAAGAACTTCATGGAGTCTGTACCAGAACCACGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
CDS-3UTR CAA 90 bp CAATGCAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAGCAAGAAATTTGCTTTaGGGAATGGTGTCTGTAGAT +
Preference number: 5 (lower is better)
Translates to: QCRKAGFGQSIATPLYPTARNLL*GMVSVD
Trigger: ATCTACAGACACCATTCCCAAAAGCAAATTTCTTGC...TGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTGCATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp AAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAATACATACTCCTAGCGCAAGAAATTaGCTTTTGGGAATGGTGTCT +
Preference number: 5 (lower is better)
Translates to: KAGFGQSIATPLYPTIHTPSARN*LLGMVS
Trigger: AGACACCATTCCCAAAAGCAAATTTCTTGCGCTAGG...AGTATGTATTGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp CAGAGACAGTTCTCAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTCCTATCCTAGCGCAAGAAATTaGCTTTTGGGAATGGTGTCT +
Preference number: 5 (lower is better)
Translates to: QRQFSEANHLLVAPNSSYPSARN*LLGMVS
Trigger: AGACACCATTCCCAAAAGCAAATTTCTTGCGCTAGG...ATAGGAGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTGAGAACTGTCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648181.1
ENST00000648891.1
CDS-3UTR CAA 90 bp CAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAATACACCACTGTATCGAAATTaGGATCCTAGCGCAAGAAAT +
Preference number: 5 (lower is better)
Translates to: QKSWLWAVHCYSFVPHNTPLYRN*DPSARN
Trigger: ATTTCTTGCGCTAGGATCCAAATTTCGATACAGTGG...TGTATTGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp AGCTGCAGAGACAGTTCTCAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTCCACTGTATCGAAATTaGGATCCTAGCGCAAGAAAT +
Preference number: 5 (lower is better)
Translates to: SCRDSSQRLIIYWWLQIAPLYRN*DPSARN
Trigger: ATTTCTTGCGCTAGGATCCAAATTTCGATACAGTGG...AGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTGAGAACTGTCTCTGCAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648181.1
ENST00000648891.1
CDS-3UTR CAA 90 bp ATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAGTCAATTGCCTGGTCTGAGCTaGAGTCCGGCCACTGTATCG +
Preference number: 5 (lower is better)
Translates to: IEKFLFPLQFLYSAIHSQLPGLS*SPATVS
Trigger: CGATACAGTGGCCGGACTCAAGCTCAGACCAGGCAA...TTGACTATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR CAA 90 bp AATTGTCCAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCTTGCCTGGTCTGAGCTaGAGTCCGGCCACTGTATCG +
Preference number: 5 (lower is better)
Translates to: NCPIEKFLFPLQFLYSAILPGLS*SPATVS
Trigger: CGATACAGTGGCCGGACTCAAGCTCAGACCAGGCAA...GATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTGGACAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR CAA 90 bp TTAAACTTCAATGCAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTGTGTTTGGTCACCATTaGAGGTGGGTACTGTCACCT +
Preference number: 5 (lower is better)
Translates to: LNFNAEKLALGSPLLLLCVFGHH*RWVLSP
Trigger: AGGTGACAGTACCCACCTCAAATGGTGACCAAACAC...ACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTGCATTGAAGTTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp CAGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAGAAGTTCAATGGTGGGGATTTGCCCATaGATGTTAAGAGTTCGGAAG +
Preference number: 5 (lower is better)
Translates to: QRASYSNNTVEAKDRSSMVGICP*MLRVRK
Trigger: CTTCCGAACTCTTAACATCAATGGGCAAATCCCCAC...CATTGAACTTCTGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp GGCAGGAAAAAGTTGTCTGTCCCTGTACAGCTCAGAAATACTCATAAAAAGGCCGTGGGGATTTGCCCATaGATGTTAAGAGTTCGGAAG +
Preference number: 5 (lower is better)
Translates to: GRKKLSVPVQLRNTHKKAVGICP*MLRVRK
Trigger: CTTCCGAACTCTTAACATCAATGGGCAAATCCCCAC...GGCCTTTTTATGAGTATTTCTGAGCTGTACAGGGACAGACAACTTTTTCCTGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp TCCATTAGAGCTTTTGGCCCAAAGTGCCTATTTTTCTGTGAGATTTGGTCTCCTTTTTGCTGGTTTCTCTaGGATGGGAGAAGGGCAGAG +
Preference number: 5 (lower is better)
Translates to: SIRAFGPKCLFFCEIWSPFCWFL*DGRRAE
Trigger: CTCTGCCCTTCTCCCATCCAAGAGAAACCAGCAAAA...AGGAGACCAAATCTCACAGAAAAATAGGCACTTTGGGCCAAAAGCTCTAATGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp CTCTTTCCCTCCCTCCTGTTGTTCATGTCTCACATGGGTACCAAAAGAAAAATGCAGTGTCTGTTGGGGTaGGAAATAAATGGGCAGAGA +
Preference number: 5 (lower is better)
Translates to: LFPSLLLFMSHMGTKRKMQCLLG*EINGQR
Trigger: TCTCTGCCCATTTATTTCCAACCCCAACAGACACTG...CATTTTTCTTTTGGTACCCATGTGAGACATGAACAACAGGAGGGAGGGAAAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp GAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGTTTCCCACTAAGCTGGCTTaGGCTTCCAACACAGCTGAC +
Preference number: 5 (lower is better)
Translates to: ESLKSDYGRLASLSFCWFPTKLA*ASNTAD
Trigger: GTCAGCTGTGTTGGAAGCCAAAGCCAGCTTAGTGGG...AAACCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp CAGATATCTGAAGCAACTTCCATGTCTTTGACCCAAAGAAGCTCCAAAAAGAAACCCACTAAGCTGGCTTaGGCTTCCAACACAGCTGAC +
Preference number: 5 (lower is better)
Translates to: QISEATSMSLTQRSSKKKPTKLA*ASNTAD
Trigger: GTCAGCTGTGTTGGAAGCCAAAGCCAGCTTAGTGGG...TTTCTTTTTGGAGCTTCTTTGGGTCAAAGACATGGAAGTTGCTTCAGATATCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp TCCATTAGAGCTTTTGGCCCAAAGTGCCTATTTTTCTGTGAGATTTGGTCTCCTTTGAGGCCAATGTGTTaGTGGGAAGCAGTTGGAAGG +
Preference number: 5 (lower is better)
Translates to: SIRAFGPKCLFFCEIWSPLRPMC*WEAVGR
Trigger: CCTTCCAACTGCTTCCCACAAACACATTGGCCTCAA...AGGAGACCAAATCTCACAGAAAAATAGGCACTTTGGGCCAAAAGCTCTAATGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp AATCTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCCAGGCAGTGGAGACTTaGGACGGTGTTGGGAGAAGC +
Preference number: 5 (lower is better)
Translates to: NLESLKSDYGRLASLSFCQAVET*DGVGRS
Trigger: GCTTCTCCCAACACCGTCCAAAGTCTCCACTGCCTG...GCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp TCCATTAGAGCTTTTGGCCCAAAGTGCCTATTTTTCTGTGAGATTTGGTCTCCTCCCATCTTGCTGGGCTaGTCCAAATCTATGGCTTCT +
Preference number: 5 (lower is better)
Translates to: SIRAFGPKCLFFCEIWSPPILLG*SKSMAS
Trigger: AGAAGCCATAGATTTGGACAAGCCCAGCAAGATGGG...AGGAGACCAAATCTCACAGAAAAATAGGCACTTTGGGCCAAAAGCTCTAATGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR CAA 90 bp CTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGGGAAGGACACCCATCTaGCTGGGCTTGTCCAAATCT +
Preference number: 5 (lower is better)
Translates to: LESLKSDYGRLASLSFCWGRTPI*LGLSKS
Trigger: AGATTTGGACAAGCCCAGCAAGATGGGTGTCCTTCC...CCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR CAA 90 bp CTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGAATACAGGTCTTGCTTaGTGGGTGGGTGCCAGAGTC +
Preference number: 5 (lower is better)
Translates to: LESLKSDYGRLASLSFCWNTGLA*WVGARV
Trigger: GACTCTGGCACCCACCCACAAAGCAAGACCTGTATT...CCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR CAA 90 bp CAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAATACAAGAAGTTCAATGGTCTaGACATTTCAGATGAGCACC +
Preference number: 5 (lower is better)
Translates to: QKSWLWAVHCYSFVPHNTRSSMV*TFQMST
Trigger: GGTGCTCATCTGAAATGTCAAGACCATTGAACTTCT...TGTATTGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp CAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAATACATCCATTGCTACTCCTTaGTACCCCACAATACATACT +
Preference number: 5 (lower is better)
Translates to: QKSWLWAVHCYSFVPHNTSIATP*YPTIHT
Trigger: AGTATGTATTGTGGGGTACAAAGGAGTAGCAATGGA...TGTATTGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp CAATGCAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAAAAGAGTTAAAGCTTTaGGGAAGATTACCAACCTGC +
Preference number: 5 (lower is better)
Translates to: QCRKAGFGQSIATPLYPTKELKL*GRLPTC
Trigger: GCAGGTTGGTAATCTTCCCAAAAGCTTTAACTCTTT...TGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTGCATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp CAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAATACAAGAGAGTATCCTGGTTaGTGTGAGATATTGGATAGG +
Preference number: 5 (lower is better)
Translates to: QKSWLWAVHCYSFVPHNTREYPG*CEILDR
Trigger: CCTATCCAATATCTCACACAAACCAGGATACTCTCT...TGTATTGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp CTTCATCCAATACAAGGGCTTGGCCATTCTCCTCTTAATCATTCTTACCCTATTCCAGGCAGGAAAAAGTaGTCTGTCCCTGTACAGCTC +
Preference number: 5 (lower is better)
Translates to: LHPIQGLGHSPLNHSYPIPGRKK*SVPVQL
Trigger: GAGCTGTACAGGGACAGACAACTTTTTCCTGCCTGG...AATAGGGTAAGAATGATTAAGAGGAGAATGGCCAAGCCCTTGTATTGGATGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000636666.1
ENST00000644342.1
ENST00000646800.1
CDS-3UTR CAA 90 bp AAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAATACATACTCCTTCTCTGATCAGTTaGGAAGTTCAACACTGGTTC +
Preference number: 5 (lower is better)
Translates to: KAGFGQSIATPLYPTIHTPSLIS*EVQHWF
Trigger: GAACCAGTGTTGAACTTCCAAACTGATCAGAGAAGG...AGTATGTATTGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR CAA 90 bp CAGAGACAGTTCTCAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTCCTATGGCTTAGGGGCCTCCTaGGTTTACTATATAATTGTG +
Preference number: 5 (lower is better)
Translates to: QRQFSEANHLLVAPNSSYGLGAS*VYYIIV
Trigger: CACAATTATATAGTAAACCAAGGAGGCCCCTAAGCC...ATAGGAGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTGAGAACTGTCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000645184.1
ENST00000648181.1
CDS TCA 90 bp TCTTCTCAATTAAGAGCTAGAGTGGCCAAAGAGGCTTTTTGCAGATaGAGATGGCAAACAAACTCCTGTATTCATCGGTCTTCCTGCCCA +
Preference number: 5 (lower is better)
Translates to: SSQLRARVAKEAFCR*RWQTNSCIHRSSCP
Trigger: TGGGCAGGAAGACCGATGAATACAGGAGTTTGTTTGCCATCTTCATCTGCAAAAAGCCTCTTTGGCCACTCTAGCTCTTAATTGAGAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649674.1
CDS CCA 90 bp CAAAGCTCATGTTCTTTCCATTACATTTCCTGGCTCCTCAATCTGTaGCCTCCATCCCACAGGCCTCTTACTTTGATTGTCTTTGTCTTT +
Preference number: 5 (lower is better)
Translates to: QSSCSFHYISWLLNL*PPSHRPLTLIVFVF
Trigger: AAAGACAAAGACAATCAAAGTAAGAGGCCTGTGGGATGGAGGCCACAGATTGAGGAGCCAGGAAATGTAATGGAAAGAACATGAGCTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649674.1
CDS-3UTR CAA 90 bp CTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGTCCTTCAGCTGCTGTTaGACAAGATTCCTCCTGCTG +
Preference number: 5 (lower is better)
Translates to: LESLKSDYGRLASLSFCWSFSCC*TRFLLL
Trigger: CAGCAGGAGGAATCTTGTCAAACAGCAGCTGAAGGA...CCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp TTAAACTTCAATGCAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTGTCCGCTCCTTGTTCTaGGTCAAGTCTTCATGTGTA +
Preference number: 5 (lower is better)
Translates to: LNFNAEKLALGSPLLLLCVRSLF*VKSSCV
Trigger: TACACATGAAGACTTGACCAAGAACAAGGAGCGGAC...ACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTGCATTGAAGTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp GAAGTCAACATGCAAACAGAGGACACATACTTGTCACAAGTGAACTTGAGGTCAGTCCGCTCCTTGTTCTaGGTCAAGTCTTCATGTGTA +
Preference number: 5 (lower is better)
Translates to: EVNMQTEDTYLSQVNLRSVRSLF*VKSSCV
Trigger: TACACATGAAGACTTGACCAAGAACAAGGAGCGGAC...TGACCTCAAGTTCACTTGTGACAAGTATGTGTCCTCTGTTTGCATGTTGACTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp AGAAGTCAACATGCAAACAGAGGACACATACTTGTCACAAGTGAACTTGAGGTCTCTGATGTCCGCTCCTaGTTCTTGGTCAAGTCTTCA +
Preference number: 5 (lower is better)
Translates to: RSQHANRGHILVTSELEVSDVRS*FLVKSS
Trigger: TGAAGACTTGACCAAGAACAAGGAGCGGACATCAGA...GACCTCAAGTTCACTTGTGACAAGTATGTGTCCTCTGTTTGCATGTTGACTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp ACTATCAAGATCAGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACATCTGATGTCCGCTCCTaGTTCTTGGTCAAGTCTTCA +
Preference number: 5 (lower is better)
Translates to: TIKIRGHHTAITQLKPRTSDVRS*FLVKSS
Trigger: TGAAGACTTGACCAAGAACAAGGAGCGGACATCAGA...TGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCTGATCTTGATAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp AGTTCTCAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTCCTATAATTGCATCTGATGTCCGCTCCTaGTTCTTGGTCAAGTCTTCA +
Preference number: 5 (lower is better)
Translates to: SSQRLIIYWWLQIAPIIASDVRS*FLVKSS
Trigger: TGAAGACTTGACCAAGAACAAGGAGCGGACATCAGA...TGCAATTATAGGAGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTGAGAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648181.1
ENST00000648891.1
CDS-3UTR CAA 90 bp CTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGTCTGACTCTACTTCTTaGCCTTCTTCCTCGGACACC +
Preference number: 5 (lower is better)
Translates to: LESLKSDYGRLASLSFCWSDSTS*PSSSDT
Trigger: GGTGTCCGAGGAAGAAGGCAAAGAAGTAGAGTCAGA...CCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp AGAAGTCAACATGCAAACAGAGGACACATACTTGTCACAAGTGAACTTGAGGTCAAAGATGGGTCTGTTTaGAGTTCCGGTTCAGGAGCT +
Preference number: 5 (lower is better)
Translates to: RSQHANRGHILVTSELEVKDGSV*SSGSGA
Trigger: AGCTCCTGAACCGGAACTCAAAACAGACCCATCTTT...GACCTCAAGTTCACTTGTGACAAGTATGTGTCCTCTGTTTGCATGTTGACTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp GAAGTCAACATGCAAACAGAGGACACATACTTGTCACAAGTGAACTTGAGGTCAAAAGATGGGTCTGTTTaGAGTTCCGGTTCAGGAGCT +
Preference number: 5 (lower is better)
Translates to: EVNMQTEDTYLSQVNLRSKDGSV*SSGSGA
Trigger: AGCTCCTGAACCGGAACTCAAAACAGACCCATCTTT...TGACCTCAAGTTCACTTGTGACAAGTATGTGTCCTCTGTTTGCATGTTGACTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp CAGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAGAAGTTCAATGCTAATAATGCTAAGGTaGCAAAGGAACAGGGCAGAC +
Preference number: 5 (lower is better)
Translates to: QRASYSNNTVEAKDRSSMLIMLR*QRNRAD
Trigger: GTCTGCCCTGTTCCTTTGCAACCTTAGCATTATTAG...CATTGAACTTCTGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp TCTATACACCAGGCAGGAAAAAGTTGTCTGTCCCTGTACAGCTCAGAAATACTCCTAATAATGCTAAGGTaGCAAAGGAACAGGGCAGAC +
Preference number: 5 (lower is better)
Translates to: SIHQAGKSCLSLYSSEILLIMLR*QRNRAD
Trigger: GTCTGCCCTGTTCCTTTGCAACCTTAGCATTATTAG...GAGTATTTCTGAGCTGTACAGGGACAGACAACTTTTTCCTGCCTGGTGTATAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp TTCCCTCCATTTTCACAATTGGTCATGTGGACAAAGTACTCACTCCTTCTCCTGCTAATAATGCTAAGGTaGCAAAGGAACAGGGCAGAC +
Preference number: 5 (lower is better)
Translates to: FPPFSQLVMWTKYSLLLLLIMLR*QRNRAD
Trigger: GTCTGCCCTGTTCCTTTGCAACCTTAGCATTATTAG...CAGGAGAAGGAGTGAGTACTTTGTCCACATGACCAATTGTGAAAATGGAGGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642643.1
ENST00000648891.1
CDS-3UTR CAA 90 bp CCCTTGTCATGTGGTGTCTTGTGGGGAGAACGGCTCCTAAAAGTCAATTCCTTGTACATAGACAACTTTTaGGCATTCTCAAGAAACTCC +
Preference number: 5 (lower is better)
Translates to: PLSCGVLWGERLLKVNSLYIDNF*AFSRNS
Trigger: GGAGTTTCTTGAGAATGCCAAAAAGTTGTCTATGTA...CAAGGAATTGACTTTTAGGAGCCGTTCTCCCCACAAGACACCACATGACAAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp ATGTTGCCCAGGCTGGTCTTAAACTACTGGACTCAAGTGATCTGCCTGTCTTGGTACATAGACAACTTTTaGGCATTCTCAAGAAACTCC +
Preference number: 5 (lower is better)
Translates to: MLPRLVLNYWTQVICLSWYIDNF*AFSRNS
Trigger: GGAGTTTCTTGAGAATGCCAAAAAGTTGTCTATGTA...CCAAGACAGGCAGATCACTTGAGTCCAGTAGTTTAAGACCAGCCTGGGCAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000645184.1
ENST00000648181.1
CDS-3UTR CAA 90 bp GCCACATTCCTTGTCATTTGGGATGAAAGAAAGGCCCAGGATCAGACAGAAGTACTCCTTCCAAGTCCTTaGCTTTATGAAGATCAACTC +
Preference number: 5 (lower is better)
Translates to: ATFLVIWDERKAQDQTEVLLPSP*LYEDQL
Trigger: GAGTTGATCTTCATAAAGCAAAGGACTTGGAAGGAG...TACTTCTGTCTGATCCTGGGCCTTTCTTTCATCCCAAATGACAAGGAATGTGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp CTCTTTCCCTCCCTCCTGTTGTTCATGTCTCACATGGGTACCAAAAGAAAAATGTCTCCAGGCCGAATCTaGATGAAAAAGCTACTACGT +
Preference number: 5 (lower is better)
Translates to: LFPSLLLFMSHMGTKRKMSPGRI*MKKLLR
Trigger: ACGTAGTAGCTTTTTCATCAAGATTCGGCCTGGAGA...CATTTTTCTTTTGGTACCCATGTGAGACATGAACAACAGGAGGGAGGGAAAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp AGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAGAAGTTCAATGGTCTCCAGGCCGAATCTaGATGAAAAAGCTACTACGT +
Preference number: 5 (lower is better)
Translates to: RGHHTAITQLKPRTEVQWSPGRI*MKKLLR
Trigger: ACGTAGTAGCTTTTTCATCAAGATTCGGCCTGGAGA...CCATTGAACTTCTGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp AAAAATGCACACACCCGAAATGAGTTCAAACCAGCCGAAACAAAACTCAGGCAGTCTCCAGGCCGAATCTaGATGAAAAAGCTACTACGT +
Preference number: 5 (lower is better)
Translates to: KNAHTRNEFKPAETKLRQSPGRI*MKKLLR
Trigger: ACGTAGTAGCTTTTTCATCAAGATTCGGCCTGGAGA...CTGCCTGAGTTTTGTTTCGGCTGGTTTGAACTCATTTCGGGTGTGTGCATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp AGAAGTCAACATGCAAACAGAGGACACATACTTGTCACAAGTGAACTTGAGGTCACTTTCATACTGCTCTaGCTCTCCAGGCCGAATCTT +
Preference number: 5 (lower is better)
Translates to: RSQHANRGHILVTSELEVTFILL*LSRPNL
Trigger: AAGATTCGGCCTGGAGAGCAAGAGCAGTATGAAAGT...GACCTCAAGTTCACTTGTGACAAGTATGTGTCCTCTGTTTGCATGTTGACTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp GGCAGGAAAAAGTTGTCTGTCCCTGTACAGCTCAGAAATACTCATAAAAAGGCCCCTAGCGCAAGAAATTaGCTTTTGGGAATGGTGTCT +
Preference number: 5 (lower is better)
Translates to: GRKKLSVPVQLRNTHKKAPSARN*LLGMVS
Trigger: AGACACCATTCCCAAAAGCAAATTTCTTGCGCTAGG...GGCCTTTTTATGAGTATTTCTGAGCTGTACAGGGACAGACAACTTTTTCCTGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp AGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAGAAGTTCAATGGCCTAGCGCAAGAAATTaGCTTTTGGGAATGGTGTCT +
Preference number: 5 (lower is better)
Translates to: RGHHTAITQLKPRTEVQWPSARN*LLGMVS
Trigger: AGACACCATTCCCAAAAGCAAATTTCTTGCGCTAGG...CCATTGAACTTCTGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp CAGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAGAAGTTCAATGCCTAGCGCAAGAAATTaGCTTTTGGGAATGGTGTCT +
Preference number: 5 (lower is better)
Translates to: QRASYSNNTVEAKDRSSMPSARN*LLGMVS
Trigger: AGACACCATTCCCAAAAGCAAATTTCTTGCGCTAGG...CATTGAACTTCTGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp GAATCCGATGGTACTTTCATACTGCTCTTGCTCTCCAGGCCGAATCTTGATGAACCACTGTATCGAAATTaGGATCCTAGCGCAAGAAAT +
Preference number: 5 (lower is better)
Translates to: ESDGTFILLLLSRPNLDEPLYRN*DPSARN
Trigger: ATTTCTTGCGCTAGGATCCAAATTTCGATACAGTGG...TTCATCAAGATTCGGCCTGGAGAGCAAGAGCAGTATGAAAGTACCATCGGATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642643.1
ENST00000643155.1
CDS-3UTR CAA 90 bp AAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAATACATACTCCACTGTATCGAAATTaGGATCCTAGCGCAAGAAAT +
Preference number: 5 (lower is better)
Translates to: KAGFGQSIATPLYPTIHTPLYRN*DPSARN
Trigger: ATTTCTTGCGCTAGGATCCAAATTTCGATACAGTGG...AGTATGTATTGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp CAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTCCTATAATTGCACTGGGTCCACTGTATCGAAATTaGGATCCTAGCGCAAGAAAT +
Preference number: 5 (lower is better)
Translates to: QRLIIYWWLQIAPIIALGPLYRN*DPSARN
Trigger: ATTTCTTGCGCTAGGATCCAAATTTCGATACAGTGG...ACCCAGTGCAATTATAGGAGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648181.1
ENST00000648891.1
CDS-3UTR CAA 90 bp GGATCAATGAGATCTAGAAGAATCTCTTGGTATAAACTCCCAATAGAAACTGAATTGCCTGGTCTGAGCTaGAGTCCGGCCACTGTATCG +
Preference number: 5 (lower is better)
Translates to: GSMRSRRISWYKLPIETELPGLS*SPATVS
Trigger: CGATACAGTGGCCGGACTCAAGCTCAGACCAGGCAA...TTCAGTTTCTATTGGGAGTTTATACCAAGAGATTCTTCTAGATCTCATTGATCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp ACTCCTTTGTACCCCACAATACATACTCTACAAAGAGTAACATTTGACAGAAAATTGCCTGGTCTGAGCTaGAGTCCGGCCACTGTATCG +
Preference number: 5 (lower is better)
Translates to: TPLYPTIHTLQRVTFDRKLPGLS*SPATVS
Trigger: CGATACAGTGGCCGGACTCAAGCTCAGACCAGGCAA...TTTTCTGTCAAATGTTACTCTTTGTAGAGTATGTATTGTGGGGTACAAAGGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp ATCTTAATTCAGAGAAGGGTTTATGTACAGATCTTGAGTAAATCTGTGTTCCAGTTGCCTGGTCTGAGCTaGAGTCCGGCCACTGTATCG +
Preference number: 5 (lower is better)
Translates to: ILIQRRVYVQILSKSVFQLPGLS*SPATVS
Trigger: CGATACAGTGGCCGGACTCAAGCTCAGACCAGGCAA...CTGGAACACAGATTTACTCAAGATCTGTACATAAACCCTTCTCTGAATTAAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp GAGACATTAACCAAATCATCCATATTGGTACATTCAAGTGCCATAAAAAGCAAGTTGCCTGGTCTGAGCTaGAGTCCGGCCACTGTATCG +
Preference number: 5 (lower is better)
Translates to: ETLTKSSILVHSSAIKSKLPGLS*SPATVS
Trigger: CGATACAGTGGCCGGACTCAAGCTCAGACCAGGCAA...CTTGCTTTTTATGGCACTTGAATGTACCAATATGGATGATTTGGTTAATGTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp ACTATCAAGATCAGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAGTGGGGATTTGCCCATaGATGTTAAGAGTTCGGAAG +
Preference number: 5 (lower is better)
Translates to: TIKIRGHHTAITQLKPRTVGICP*MLRVRK
Trigger: CTTCCGAACTCTTAACATCAATGGGCAAATCCCCAC...TGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCTGATCTTGATAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp GAAGTCAACATGCAAACAGAGGACACATACTTGTCACAAGTGAACTTGAGGTCAGTGGGGATTTGCCCATaGATGTTAAGAGTTCGGAAG +
Preference number: 5 (lower is better)
Translates to: EVNMQTEDTYLSQVNLRSVGICP*MLRVRK
Trigger: CTTCCGAACTCTTAACATCAATGGGCAAATCCCCAC...TGACCTCAAGTTCACTTGTGACAAGTATGTGTCCTCTGTTTGCATGTTGACTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp TTAAACTTCAATGCAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTGTGGGGATTTGCCCATaGATGTTAAGAGTTCGGAAG +
Preference number: 5 (lower is better)
Translates to: LNFNAEKLALGSPLLLLCVGICP*MLRVRK
Trigger: CTTCCGAACTCTTAACATCAATGGGCAAATCCCCAC...ACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTGCATTGAAGTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp TTAGGGGCCTCCTTGGTTTACTATATAATTGTGGGGAACCAGTCCAGATATTTCGTGGGGATTTGCCCATaGATGTTAAGAGTTCGGAAG +
Preference number: 5 (lower is better)
Translates to: LGASLVYYIIVGNQSRYFVGICP*MLRVRK
Trigger: CTTCCGAACTCTTAACATCAATGGGCAAATCCCCAC...GAAATATCTGGACTGGTTCCCCACAATTATATAGTAAACCAAGGAGGCCCCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000645184.1
ENST00000648181.1
CDS-3UTR CAA 90 bp GGCAGGAAAAAGTTGTCTGTCCCTGTACAGCTCAGAAATACTCATAAAAAGGCCTTCTCCTGTGGGGATTaGCCCATTGATGTTAAGAGT +
Preference number: 5 (lower is better)
Translates to: GRKKLSVPVQLRNTHKKAFSCGD*PIDVKS
Trigger: ACTCTTAACATCAATGGGCAAATCCCCACAGGAGAA...GGCCTTTTTATGAGTATTTCTGAGCTGTACAGGGACAGACAACTTTTTCCTGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp GGATCAATGAGATCTAGAAGAATCTCTTGGTATAAACTCCCAATAGAAACTGAATCCAAGTCTCCACTGTaGTCGTCAGTCTGGGCAGCC +
Preference number: 5 (lower is better)
Translates to: GSMRSRRISWYKLPIETESKSPL*SSVWAA
Trigger: GGCTGCCCAGACTGACGACAACAGTGGAGACTTGGA...TTCAGTTTCTATTGGGAGTTTATACCAAGAGATTCTTCTAGATCTCATTGATCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp GAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGTTTTGCTCCTTTGCCTCCTaGATGGCTTGTACAAGGACC +
Preference number: 5 (lower is better)
Translates to: ESLKSDYGRLASLSFCWFCSFAS*MACTRT
Trigger: GGTCCTTGTACAAGCCATCAAGGAGGCAAAGGAGCA...AAACCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp CTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGTTTTGCTGGTTTCTCTaGGATGGGAGAAGGGCAGAG +
Preference number: 5 (lower is better)
Translates to: LESLKSDYGRLASLSFCWFCWFL*DGRRAE
Trigger: CTCTGCCCTTCTCCCATCCAAGAGAAACCAGCAAAA...CCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp GCCACATTCCTTGTCATTTGGGATGAAAGAAAGGCCCAGGATCAGACAGAAGTAGTTCCATTAGAGCTTTaGGCCCAAAGTGCCTATTTT +
Preference number: 5 (lower is better)
Translates to: ATFLVIWDERKAQDQTEVVPLEL*AQSAYF
Trigger: AAAATAGGCACTTTGGGCCAAAAGCTCTAATGGAAC...TACTTCTGTCTGATCCTGGGCCTTTCTTTCATCCCAAATGACAAGGAATGTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp GAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGTTTTTGTCATGTGGTGTCTaGTGGGGAGAACGGCTCCTA +
Preference number: 5 (lower is better)
Translates to: ESLKSDYGRLASLSFCWFLSCGV*WGERLL
Trigger: TAGGAGCCGTTCTCCCCACAAGACACCACATGACAA...AAACCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp CAGATATCTGAAGCAACTTCCATGTCTTTGACCCAAAGAAGCTCCAAAAAGAAATTGTCATGTGGTGTCTaGTGGGGAGAACGGCTCCTA +
Preference number: 5 (lower is better)
Translates to: QISEATSMSLTQRSSKKKLSCGV*WGERLL
Trigger: TAGGAGCCGTTCTCCCCACAAGACACCACATGACAA...TTTCTTTTTGGAGCTTCTTTGGGTCAAAGACATGGAAGTTGCTTCAGATATCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp CTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGCCCATCTTGCTGGGCTaGTCCAAATCTATGGCTTCT +
Preference number: 5 (lower is better)
Translates to: LESLKSDYGRLASLSFCWPILLG*SKSMAS
Trigger: AGAAGCCATAGATTTGGACAAGCCCAGCAAGATGGG...CCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR CAA 90 bp GGATCAATGAGATCTAGAAGAATCTCTTGGTATAAACTCCCAATAGAAACTGAAAGTTCCCGAGGTTTGTaGTCTCCTCACCCCCAGCTG +
Preference number: 5 (lower is better)
Translates to: GSMRSRRISWYKLPIETESSRGL*SPHPQL
Trigger: CAGCTGGGGGTGAGGAGACAACAAACCTCGGGAACT...TTCAGTTTCTATTGGGAGTTTATACCAAGAGATTCTTCTAGATCTCATTGATCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR CAA 90 bp GGATCAATGAGATCTAGAAGAATCTCTTGGTATAAACTCCCAATAGAAACTGAATCCAGTTCCCGAGGTTaGTTGTCTCCTCACCCCCAG +
Preference number: 5 (lower is better)
Translates to: GSMRSRRISWYKLPIETESSSRG*LSPHPQ
Trigger: CTGGGGGTGAGGAGACAACAAACCTCGGGAACTGGA...TTCAGTTTCTATTGGGAGTTTATACCAAGAGATTCTTCTAGATCTCATTGATCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR CAA 90 bp CAGAGACAGTTCTCAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTCCTATCCTCCATTTTCACAATaGGTCATGTGGACAAAGTAC +
Preference number: 5 (lower is better)
Translates to: QRQFSEANHLLVAPNSSYPPFSQ*VMWTKY
Trigger: GTACTTTGTCCACATGACCAATTGTGAAAATGGAGG...ATAGGAGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTGAGAACTGTCTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648181.1
ENST00000648891.1
CDS-3UTR CAA 90 bp CAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTCCTATAATTGCACTGGGTCCTCCATTTTCACAATaGGTCATGTGGACAAAGTAC +
Preference number: 5 (lower is better)
Translates to: QRLIIYWWLQIAPIIALGPPFSQ*VMWTKY
Trigger: GTACTTTGTCCACATGACCAATTGTGAAAATGGAGG...ACCCAGTGCAATTATAGGAGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648181.1
ENST00000648891.1
CDS-3UTR CAA 90 bp GTCCAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAGCTTTGGGCAGTCCATaGCTACTCCTTTGTACCCCA +
Preference number: 5 (lower is better)
Translates to: VQLRSFYSPCNFCTLLSIALGSP*LLLCTP
Trigger: TGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGC...TATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR CAA 90 bp TCTATACACCAGGCAGGAAAAAGTTGTCTGTCCCTGTACAGCTCAGAAATACTCACAGAGGACACATACTaGTCACAAGTGAACTTGAGG +
Preference number: 5 (lower is better)
Translates to: SIHQAGKSCLSLYSSEILTEDTY*SQVNLR
Trigger: CCTCAAGTTCACTTGTGACAAGTATGTGTCCTCTGT...GAGTATTTCTGAGCTGTACAGGGACAGACAACTTTTTCCTGCCTGGTGTATAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp ACTATCAAGATCAGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAGATCTCCGAGGACTCTaGCTGCATTTCAGAAAACTG +
Preference number: 5 (lower is better)
Translates to: TIKIRGHHTAITQLKPRTDLRGL*LHFRKL
Trigger: CAGTTTTCTGAAATGCAGCAAGAGTCCTCGGAGATC...TGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCTGATCTTGATAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636666.1
ENST00000644342.1
ENST00000646800.1
CDS-3UTR CAA 90 bp TTAAACTTCAATGCAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTGATCTCCGAGGACTCTaGCTGCATTTCAGAAAACTG +
Preference number: 5 (lower is better)
Translates to: LNFNAEKLALGSPLLLLCDLRGL*LHFRKL
Trigger: CAGTTTTCTGAAATGCAGCAAGAGTCCTCGGAGATC...ACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTGCATTGAAGTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636666.1
ENST00000644342.1
ENST00000646800.1
CDS-3UTR CAA 90 bp CAGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAGAAGTTCAATGATCCAATACAAGGGCTaGGCCATTCTCCTCTTAATC +
Preference number: 5 (lower is better)
Translates to: QRASYSNNTVEAKDRSSMIQYKG*AILLLI
Trigger: GATTAAGAGGAGAATGGCCAAGCCCTTGTATTGGAT...CATTGAACTTCTGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636666.1
ENST00000644342.1
ENST00000646800.1
CDS-3UTR CAA 90 bp TCTATACACCAGGCAGGAAAAAGTTGTCTGTCCCTGTACAGCTCAGAAATACTCATCCAATACAAGGGCTaGGCCATTCTCCTCTTAATC +
Preference number: 5 (lower is better)
Translates to: SIHQAGKSCLSLYSSEILIQYKG*AILLLI
Trigger: GATTAAGAGGAGAATGGCCAAGCCCTTGTATTGGAT...GAGTATTTCTGAGCTGTACAGGGACAGACAACTTTTTCCTGCCTGGTGTATAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000636666.1
ENST00000644342.1
ENST00000646800.1
CDS-3UTR CAA 90 bp AGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAGAAGTTCAATGGCCTTCTCTGATCAGTTaGGAAGTTCAACACTGGTTC +
Preference number: 5 (lower is better)
Translates to: RGHHTAITQLKPRTEVQWPSLIS*EVQHWF
Trigger: GAACCAGTGTTGAACTTCCAAACTGATCAGAGAAGG...CCATTGAACTTCTGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR CAA 90 bp CAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAATACAGGATGTGCAAAGGATTaGGAAGTATCTTTTAGACAC +
Preference number: 5 (lower is better)
Translates to: QKSWLWAVHCYSFVPHNTGCAKD*EVSFRH
Trigger: GTGTCTAAAAGATACTTCCAAATCCTTTGCACATCC...TGTATTGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS TCA 90 bp CCTTCTTGTCCATCTGCTCACCTTCCCCAGGAGTATAAATCACACTaGAACTACCATTTGATTGTAATAAGGTTAAGTGGCCAACCACCT +
Preference number: 5 (lower is better)
Translates to: PSCPSAHLPQEYKSH*NYHLIVIRLSGQPP
Trigger: AGGTGGTTGGCCACTTAACCTTATTACAATCAAATGGTAGTTTCAGTGTGATTTATACTCCTGGGGAAGGTGAGCAGATGGACAAGAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460378.1
CDS TCA 90 bp CAGTTCTACCACCACCTGGTGATTAATCCCAGAATTTCAGAAGAATaGACATTAGTGGAATACCAAAGGCCTTCTTGTCCATCTGCTCAC +
Preference number: 5 (lower is better)
Translates to: QFYHHLVINPRISEE*TLVEYQRPSCPSAH
Trigger: GTGAGCAGATGGACAAGAAGGCCTTTGGTATTCCACTAATGTTCATTCTTCTGAAATTCTGGGATTAATCACCAGGTGGTGGTAGAACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460378.1
CDS TCA 90 bp TCTTGTCCCTTAGCATGTTTCTGTGTTTCTGCACTGCTTAATGAATaGAGATCCAAAGATGGGTCTGTTTTGAGTTCCGGTTCAGGAGCT +
Preference number: 5 (lower is better)
Translates to: SCPLACFCVSALLNE*RSKDGSVLSSGSGA
Trigger: AGCTCCTGAACCGGAACTCAAAACAGACCCATCTTTGGATCTTCATTCATTAAGCAGTGCAGAAACACAGAAACATGCTAAGGGACAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644780.1
CDS CCA 90 bp TTTGGAGCACTCTTCAAGTCCTTCTCCTTCCTTAATTTCAAAATCTaGATCTTCTCTGAGTTCTTCCTGAGCAGGCTGTGTTTCTGCACT +
Preference number: 5 (lower is better)
Translates to: FGALFKSFSFLNFKI*IFSEFFLSRLCFCT
Trigger: AGTGCAGAAACACAGCCTGCTCAGGAAGAACTCAGAGAAGATCCAGATTTTGAAATTAAGGAAGGAGAAGGACTTGAAGAGTGCTCCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 25 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373797.2
ENST00000373798.5
ENST00000482464.6
ENST00000642643.1
ENST00000642937.2
ENST00000643173.1
ENST00000643302.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000645111.1
ENST00000645184.1
ENST00000645999.1
ENST00000646189.1
ENST00000646260.1
ENST00000646800.1
ENST00000647103.1
ENST00000647918.1
ENST00000648891.1
ENST00000649674.1
ENST00000649717.1
ENST00000650265.1
CDS-3UTR CAA 90 bp CAGATATCTGAAGCAACTTCCATGTCTTTGACCCAAAGAAGCTCCAAAAAGAAATCCTTCAGCTGCTGTTaGACAAGATTCCTCCTGCTG +
Preference number: 5 (lower is better)
Translates to: QISEATSMSLTQRSSKKKSFSCC*TRFLLL
Trigger: CAGCAGGAGGAATCTTGTCAAACAGCAGCTGAAGGA...TTTCTTTTTGGAGCTTCTTTGGGTCAAAGACATGGAAGTTGCTTCAGATATCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp GAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGTTTTCCTTCAGCTGCTGTTaGACAAGATTCCTCCTGCTG +
Preference number: 5 (lower is better)
Translates to: ESLKSDYGRLASLSFCWFSFSCC*TRFLLL
Trigger: CAGCAGGAGGAATCTTGTCAAACAGCAGCTGAAGGA...AAACCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp CTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGGTCCGCTCCTTGTTCTaGGTCAAGTCTTCATGTGTA +
Preference number: 5 (lower is better)
Translates to: LESLKSDYGRLASLSFCWVRSLF*VKSSCV
Trigger: TACACATGAAGACTTGACCAAGAACAAGGAGCGGAC...CCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp CTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGTCTGATGTCCGCTCCTaGTTCTTGGTCAAGTCTTCA +
Preference number: 5 (lower is better)
Translates to: LESLKSDYGRLASLSFCWSDVRS*FLVKSS
Trigger: TGAAGACTTGACCAAGAACAAGGAGCGGACATCAGA...CCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp CACTGTATCGAAATTTGGATCCTAGCGCAAGAAATTTGCTTTTGGGAATGGTGTTCTGATGTCCGCTCCTaGTTCTTGGTCAAGTCTTCA +
Preference number: 5 (lower is better)
Translates to: HCIEIWILAQEICFWEWCSDVRS*FLVKSS
Trigger: TGAAGACTTGACCAAGAACAAGGAGCGGACATCAGA...ACACCATTCCCAAAAGCAAATTTCTTGCGCTAGGATCCAAATTTCGATACAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
CDS-3UTR CAA 90 bp CAGATATCTGAAGCAACTTCCATGTCTTTGACCCAAAGAAGCTCCAAAAAGAAATCTGACTCTACTTCTTaGCCTTCTTCCTCGGACACC +
Preference number: 5 (lower is better)
Translates to: QISEATSMSLTQRSSKKKSDSTS*PSSSDT
Trigger: GGTGTCCGAGGAAGAAGGCAAAGAAGTAGAGTCAGA...TTTCTTTTTGGAGCTTCTTTGGGTCAAAGACATGGAAGTTGCTTCAGATATCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp GAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGTTTTCTGACTCTACTTCTTaGCCTTCTTCCTCGGACACC +
Preference number: 5 (lower is better)
Translates to: ESLKSDYGRLASLSFCWFSDSTS*PSSSDT
Trigger: GGTGTCCGAGGAAGAAGGCAAAGAAGTAGAGTCAGA...AAACCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp ATTGTCCAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCTCTGACTCTACTTCTTaGCCTTCTTCCTCGGACACC +
Preference number: 5 (lower is better)
Translates to: IVQLRSFYSPCNFCTLLSSDSTS*PSSSDT
Trigger: GGTGTCCGAGGAAGAAGGCAAAGAAGTAGAGTCAGA...GGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTGGACAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000646800.1
CDS-3UTR CAA 90 bp TTGGCAGTGTTACCTTTAGGTAATACAAAGCTGGAATGCCCAATATTTTTCCTCTCTGACTCTACTTCTTaGCCTTCTTCCTCGGACACC +
Preference number: 5 (lower is better)
Translates to: LAVLPLGNTKLECPIFFLSDSTS*PSSSDT
Trigger: GGTGTCCGAGGAAGAAGGCAAAGAAGTAGAGTCAGA...GAGGAAAAATATTGGGCATTCCAGCTTTGTATTACCTAAAGGTAACACTGCCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644342.1
ENST00000646800.1
CDS-3UTR CAA 90 bp CTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGAAAGATGGGTCTGTTTaGAGTTCCGGTTCAGGAGCT +
Preference number: 5 (lower is better)
Translates to: LESLKSDYGRLASLSFCWKDGSV*SSGSGA
Trigger: AGCTCCTGAACCGGAACTCAAAACAGACCCATCTTT...CCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp CACTGTATCGAAATTTGGATCCTAGCGCAAGAAATTTGCTTTTGGGAATGGTGTAAAGATGGGTCTGTTTaGAGTTCCGGTTCAGGAGCT +
Preference number: 5 (lower is better)
Translates to: HCIEIWILAQEICFWEWCKDGSV*SSGSGA
Trigger: AGCTCCTGAACCGGAACTCAAAACAGACCCATCTTT...ACACCATTCCCAAAAGCAAATTTCTTGCGCTAGGATCCAAATTTCGATACAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
CDS-3UTR CAA 90 bp AGGCCGTGGTTCTGGTACAGACTCCATGAAGTTCTTTTTCAGCTCACTGATGCTTCTTTTACTTCTATTTaGGAGCACTCTTCAAGTCCT +
Preference number: 5 (lower is better)
Translates to: RPWFWYRLHEVLFQLTDASFTSI*EHSSSP
Trigger: AGGACTTGAAGAGTGCTCCAAAATAGAAGTAAAAGA...AGCATCAGTGAGCTGAAAAAGAACTTCATGGAGTCTGTACCAGAACCACGGCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
CDS-3UTR CAA 90 bp GGGCTCTTTCCCTCCCTCCTGTTGTTCATGTCTCACATGGGTACCAAAAGAAAATCTTTTACTTCTATTTaGGAGCACTCTTCAAGTCCT +
Preference number: 5 (lower is better)
Translates to: GLFPSLLLFMSHMGTKRKSFTSI*EHSSSP
Trigger: AGGACTTGAAGAGTGCTCCAAAATAGAAGTAAAAGA...TTTTCTTTTGGTACCCATGTGAGACATGAACAACAGGAGGGAGGGAAAGAGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp AGTTCTCAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTCCTATAATTGCATCCAACAAAGAAACCTaGCAGTGCATGTTCCTGTGT +
Preference number: 5 (lower is better)
Translates to: SSQRLIIYWWLQIAPIIASNKET*QCMFLC
Trigger: ACACAGGAACATGCACTGCAAGGTTTCTTTGTTGGA...TGCAATTATAGGAGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTGAGAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648891.1
CDS-3UTR CAA 90 bp AGAAGTCAACATGCAAACAGAGGACACATACTTGTCACAAGTGAACTTGAGGTCTCCAACAAAGAAACCTaGCAGTGCATGTTCCTGTGT +
Preference number: 5 (lower is better)
Translates to: RSQHANRGHILVTSELEVSNKET*QCMFLC
Trigger: ACACAGGAACATGCACTGCAAGGTTTCTTTGTTGGA...GACCTCAAGTTCACTTGTGACAAGTATGTGTCCTCTGTTTGCATGTTGACTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp TCAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTCCTATAATTGCACTGGGTCGTTTAAGCAAATCTaGTCCCTTAGCATGTTTCTC +
Preference number: 5 (lower is better)
Translates to: SEANHLLVAPNSSYNCTGSFKQI*SLSMFL
Trigger: GAGAAACATGCTAAGGGACAAGATTTGCTTAAACGA...CCCAGTGCAATTATAGGAGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648891.1
CDS-3UTR CAA 90 bp AAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAATACATACTTCGTTTAAGCAAATCTaGTCCCTTAGCATGTTTCTC +
Preference number: 5 (lower is better)
Translates to: KAGFGQSIATPLYPTIHTSFKQI*SLSMFL
Trigger: GAGAAACATGCTAAGGGACAAGATTTGCTTAAACGA...AGTATGTATTGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp CAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTCCTATAATTGCACTGGGTTCGTTTAAGCAAATCTaGTCCCTTAGCATGTTTCTC +
Preference number: 5 (lower is better)
Translates to: QRLIIYWWLQIAPIIALGSFKQI*SLSMFL
Trigger: GAGAAACATGCTAAGGGACAAGATTTGCTTAAACGA...ACCCAGTGCAATTATAGGAGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648891.1
CDS-3UTR CAA 90 bp TCCATTAGAGCTTTTGGCCCAAAGTGCCTATTTTTCTGTGAGATTTGGTCTCCTCTAATAATGCTAAGGTaGCAAAGGAACAGGGCAGAC +
Preference number: 5 (lower is better)
Translates to: SIRAFGPKCLFFCEIWSPLIMLR*QRNRAD
Trigger: GTCTGCCCTGTTCCTTTGCAACCTTAGCATTATTAG...AGGAGACCAAATCTCACAGAAAAATAGGCACTTTGGGCCAAAAGCTCTAATGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp AGAAGTCAACATGCAAACAGAGGACACATACTTGTCACAAGTGAACTTGAGGTCCTAATAATGCTAAGGTaGCAAAGGAACAGGGCAGAC +
Preference number: 5 (lower is better)
Translates to: RSQHANRGHILVTSELEVLIMLR*QRNRAD
Trigger: GTCTGCCCTGTTCCTTTGCAACCTTAGCATTATTAG...GACCTCAAGTTCACTTGTGACAAGTATGTGTCCTCTGTTTGCATGTTGACTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp TCTATACACCAGGCAGGAAAAAGTTGTCTGTCCCTGTACAGCTCAGAAATACTCCTCCTTCCAAGTCCTTaGCTTTATGAAGATCAACTC +
Preference number: 5 (lower is better)
Translates to: SIHQAGKSCLSLYSSEILLLPSP*LYEDQL
Trigger: GAGTTGATCTTCATAAAGCAAAGGACTTGGAAGGAG...GAGTATTTCTGAGCTGTACAGGGACAGACAACTTTTTCCTGCCTGGTGTATAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp GAAGTCAACATGCAAACAGAGGACACATACTTGTCACAAGTGAACTTGAGGTCATCTCCAGGCCGAATCTaGATGAAAAAGCTACTACGT +
Preference number: 5 (lower is better)
Translates to: EVNMQTEDTYLSQVNLRSSPGRI*MKKLLR
Trigger: ACGTAGTAGCTTTTTCATCAAGATTCGGCCTGGAGA...TGACCTCAAGTTCACTTGTGACAAGTATGTGTCCTCTGTTTGCATGTTGACTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp CTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGACTTTCATACTGCTCTaGCTCTCCAGGCCGAATCTT +
Preference number: 5 (lower is better)
Translates to: LESLKSDYGRLASLSFCWTFILL*LSRPNL
Trigger: AAGATTCGGCCTGGAGAGCAAGAGCAGTATGAAAGT...CCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp CAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTCCTATAATTGCACTGGGTGCAAGAAATTTGCTTTaGGGAATGGTGTCTGTAGAT +
Preference number: 5 (lower is better)
Translates to: QRLIIYWWLQIAPIIALGARNLL*GMVSVD
Trigger: ATCTACAGACACCATTCCCAAAAGCAAATTTCTTGC...ACCCAGTGCAATTATAGGAGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648181.1
ENST00000648891.1
CDS-3UTR CAA 90 bp ACTATCAAGATCAGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACACCTAGCGCAAGAAATTaGCTTTTGGGAATGGTGTCT +
Preference number: 5 (lower is better)
Translates to: TIKIRGHHTAITQLKPRTPSARN*LLGMVS
Trigger: AGACACCATTCCCAAAAGCAAATTTCTTGCGCTAGG...TGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCTGATCTTGATAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp GAAGTCAACATGCAAACAGAGGACACATACTTGTCACAAGTGAACTTGAGGTCACCTAGCGCAAGAAATTaGCTTTTGGGAATGGTGTCT +
Preference number: 5 (lower is better)
Translates to: EVNMQTEDTYLSQVNLRSPSARN*LLGMVS
Trigger: AGACACCATTCCCAAAAGCAAATTTCTTGCGCTAGG...TGACCTCAAGTTCACTTGTGACAAGTATGTGTCCTCTGTTTGCATGTTGACTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp TTAAACTTCAATGCAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTCCTAGCGCAAGAAATTaGCTTTTGGGAATGGTGTCT +
Preference number: 5 (lower is better)
Translates to: LNFNAEKLALGSPLLLLCPSARN*LLGMVS
Trigger: AGACACCATTCCCAAAAGCAAATTTCTTGCGCTAGG...ACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTGCATTGAAGTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp CAGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAGAAGTTCAATGCCACTGTATCGAAATTaGGATCCTAGCGCAAGAAAT +
Preference number: 5 (lower is better)
Translates to: QRASYSNNTVEAKDRSSMPLYRN*DPSARN
Trigger: ATTTCTTGCGCTAGGATCCAAATTTCGATACAGTGG...CATTGAACTTCTGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp TTCCCTCCATTTTCACAATTGGTCATGTGGACAAAGTACTCACTCCTTCTCCTGCCACTGTATCGAAATTaGGATCCTAGCGCAAGAAAT +
Preference number: 5 (lower is better)
Translates to: FPPFSQLVMWTKYSLLLLPLYRN*DPSARN
Trigger: ATTTCTTGCGCTAGGATCCAAATTTCGATACAGTGG...CAGGAGAAGGAGTGAGTACTTTGTCCACATGACCAATTGTGAAAATGGAGGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642643.1
ENST00000648891.1
CDS-3UTR CAA 90 bp GGCAGGAAAAAGTTGTCTGTCCCTGTACAGCTCAGAAATACTCATAAAAAGGCCCCACTGTATCGAAATTaGGATCCTAGCGCAAGAAAT +
Preference number: 5 (lower is better)
Translates to: GRKKLSVPVQLRNTHKKAPLYRN*DPSARN
Trigger: ATTTCTTGCGCTAGGATCCAAATTTCGATACAGTGG...GGCCTTTTTATGAGTATTTCTGAGCTGTACAGGGACAGACAACTTTTTCCTGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp GAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGTTTGTGTTTGGTCACCATTaGAGGTGGGTACTGTCACCT +
Preference number: 5 (lower is better)
Translates to: ESLKSDYGRLASLSFCWFVFGHH*RWVLSP
Trigger: AGGTGACAGTACCCACCTCAAATGGTGACCAAACAC...AAACCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000349460.9
ENST00000373798.5
ENST00000642937.2
ENST00000643155.1
CDS-3UTR CAA 90 bp ATTGTCCAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCGTGTTTGGTCACCATTaGAGGTGGGTACTGTCACCT +
Preference number: 5 (lower is better)
Translates to: IVQLRSFYSPCNFCTLLSVFGHH*RWVLSP
Trigger: AGGTGACAGTACCCACCTCAAATGGTGACCAAACAC...GGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTGGACAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644470.1
ENST00000644600.1
ENST00000646800.1
CDS-3UTR CAA 90 bp GTCCAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAGTGTTTGGTCACCATTaGAGGTGGGTACTGTCACCT +
Preference number: 5 (lower is better)
Translates to: VQLRSFYSPCNFCTLLSIVFGHH*RWVLSP
Trigger: AGGTGACAGTACCCACCTCAAATGGTGACCAAACAC...TATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTGGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644470.1
ENST00000644600.1
ENST00000646800.1
CDS-3UTR CAA 90 bp ATTACTTTGGTGCTGCCAATCACTAATTGGGCAATGCCAATAATGAAGCATTCTGTGTTTGGTCACCATTaGAGGTGGGTACTGTCACCT +
Preference number: 5 (lower is better)
Translates to: ITLVLPITNWAMPIMKHSVFGHH*RWVLSP
Trigger: AGGTGACAGTACCCACCTCAAATGGTGACCAAACAC...AGAATGCTTCATTATTGGCATTGCCCAATTAGTGATTGGCAGCACCAAAGTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000646800.1
CDS-3UTR CAA 90 bp TCCATTAGAGCTTTTGGCCCAAAGTGCCTATTTTTCTGTGAGATTTGGTCTCCTTTCTCCTGTGGGGATTaGCCCATTGATGTTAAGAGT +
Preference number: 5 (lower is better)
Translates to: SIRAFGPKCLFFCEIWSPFSCGD*PIDVKS
Trigger: ACTCTTAACATCAATGGGCAAATCCCCACAGGAGAA...AGGAGACCAAATCTCACAGAAAAATAGGCACTTTGGGCCAAAAGCTCTAATGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR CAA 90 bp TTAGGGGCCTCCTTGGTTTACTATATAATTGTGGGGAACCAGTCCAGATATTTCTTCTCCTGTGGGGATTaGCCCATTGATGTTAAGAGT +
Preference number: 5 (lower is better)
Translates to: LGASLVYYIIVGNQSRYFFSCGD*PIDVKS
Trigger: ACTCTTAACATCAATGGGCAAATCCCCACAGGAGAA...GAAATATCTGGACTGGTTCCCCACAATTATATAGTAAACCAAGGAGGCCCCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000645184.1
ENST00000648181.1
CDS-3UTR CAA 90 bp GAAGTCAACATGCAAACAGAGGACACATACTTGTCACAAGTGAACTTGAGGTCATTCTCCTGTGGGGATTaGCCCATTGATGTTAAGAGT +
Preference number: 5 (lower is better)
Translates to: EVNMQTEDTYLSQVNLRSFSCGD*PIDVKS
Trigger: ACTCTTAACATCAATGGGCAAATCCCCACAGGAGAA...TGACCTCAAGTTCACTTGTGACAAGTATGTGTCCTCTGTTTGCATGTTGACTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp CTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGCTCAGATGTGATAGTTaGAGCTGTCAGCAAGACTCC +
Preference number: 5 (lower is better)
Translates to: LESLKSDYGRLASLSFCWLRCDS*SCQQDS
Trigger: GGAGTCTTGCTGACAGCTCAAACTATCACATCTGAG...CCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp AATCTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGCTCCTTTGCCTCCTaGATGGCTTGTACAAGGACC +
Preference number: 5 (lower is better)
Translates to: NLESLKSDYGRLASLSFCCSFAS*MACTRT
Trigger: GGTCCTTGTACAAGCCATCAAGGAGGCAAAGGAGCA...GCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp GAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGTTTTTTTGCTGGTTTCTCTaGGATGGGAGAAGGGCAGAG +
Preference number: 5 (lower is better)
Translates to: ESLKSDYGRLASLSFCWFFCWFL*DGRRAE
Trigger: CTCTGCCCTTCTCCCATCCAAGAGAAACCAGCAAAA...AAACCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTC
43% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp GCCACATTCCTTGTCATTTGGGATGAAAGAAAGGCCCAGGATCAGACAGAAGTAAGCTTCTTTATCATTTaGCTGGTTTCTCTTGGATGG +
Preference number: 5 (lower is better)
Translates to: ATFLVIWDERKAQDQTEVSFFII*LVSLGW
Trigger: CCATCCAAGAGAAACCAGCAAAATGATAAAGAAGCT...TACTTCTGTCTGATCCTGGGCCTTTCTTTCATCCCAAATGACAAGGAATGTGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp CAGATATCTGAAGCAACTTCCATGTCTTTGACCCAAAGAAGCTCCAAAAAGAAATTTCCCTCCCTCCTGTaGTTCATGTCTCACATGGGT +
Preference number: 5 (lower is better)
Translates to: QISEATSMSLTQRSSKKKFPSLL*FMSHMG
Trigger: ACCCATGTGAGACATGAACAACAGGAGGGAGGGAAA...TTTCTTTTTGGAGCTTCTTTGGGTCAAAGACATGGAAGTTGCTTCAGATATCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp CAGATATCTGAAGCAACTTCCATGTCTTTGACCCAAAGAAGCTCCAAAAAGAAACCCATCTTGCTGGGCTaGTCCAAATCTATGGCTTCT +
Preference number: 5 (lower is better)
Translates to: QISEATSMSLTQRSSKKKPILLG*SKSMAS
Trigger: AGAAGCCATAGATTTGGACAAGCCCAGCAAGATGGG...TTTCTTTTTGGAGCTTCTTTGGGTCAAAGACATGGAAGTTGCTTCAGATATCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR CAA 90 bp AATCTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCAATACAGGTCTTGCTTaGTGGGTGGGTGCCAGAGTC +
Preference number: 5 (lower is better)
Translates to: NLESLKSDYGRLASLSFCNTGLA*WVGARV
Trigger: GACTCTGGCACCCACCCACAAAGCAAGACCTGTATT...GCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR CAA 90 bp CAGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAGAAGTTCAATGAATTTCTTCATTTTCTaGCTGGGGCAAGGCTCTTTC +
Preference number: 5 (lower is better)
Translates to: QRASYSNNTVEAKDRSSMNFFIF*LGQGSF
Trigger: GAAAGAGCCTTGCCCCAGCAAGAAAATGAAGAAATT...CATTGAACTTCTGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp AGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAGAAGTTCAATGGAATTTCTTCATTTTCTaGCTGGGGCAAGGCTCTTTC +
Preference number: 5 (lower is better)
Translates to: RGHHTAITQLKPRTEVQWNFFIF*LGQGSF
Trigger: GAAAGAGCCTTGCCCCAGCAAGAAAATGAAGAAATT...CCATTGAACTTCTGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp GGCAGGAAAAAGTTGTCTGTCCCTGTACAGCTCAGAAATACTCATAAAAAGGCCTCCATTGCTACTCCTTaGTACCCCACAATACATACT +
Preference number: 5 (lower is better)
Translates to: GRKKLSVPVQLRNTHKKASIATP*YPTIHT
Trigger: AGTATGTATTGTGGGGTACAAAGGAGTAGCAATGGA...GGCCTTTTTATGAGTATTTCTGAGCTGTACAGGGACAGACAACTTTTTCCTGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp TCTATACACCAGGCAGGAAAAAGTTGTCTGTCCCTGTACAGCTCAGAAATACTCTCCATTGCTACTCCTTaGTACCCCACAATACATACT +
Preference number: 5 (lower is better)
Translates to: SIHQAGKSCLSLYSSEILSIATP*YPTIHT
Trigger: AGTATGTATTGTGGGGTACAAAGGAGTAGCAATGGA...GAGTATTTCTGAGCTGTACAGGGACAGACAACTTTTTCCTGCCTGGTGTATAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp AGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAGAAGTTCAATGGTCCATTGCTACTCCTTaGTACCCCACAATACATACT +
Preference number: 5 (lower is better)
Translates to: RGHHTAITQLKPRTEVQWSIATP*YPTIHT
Trigger: AGTATGTATTGTGGGGTACAAAGGAGTAGCAATGGA...CCATTGAACTTCTGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp AATTGTCCAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCGCTTTGGGCAGTCCATaGCTACTCCTTTGTACCCCA +
Preference number: 5 (lower is better)
Translates to: NCPIEKFLFPLQFLYSAIALGSP*LLLCTP
Trigger: TGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGC...GATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTGGACAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR CAA 90 bp AAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAATACATACTAAAGAGTTAAAGCTTTaGGGAAGATTACCAACCTGC +
Preference number: 5 (lower is better)
Translates to: KAGFGQSIATPLYPTIHTKELKL*GRLPTC
Trigger: GCAGGTTGGTAATCTTCCCAAAAGCTTTAACTCTTT...AGTATGTATTGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp GAAGTCAACATGCAAACAGAGGACACATACTTGTCACAAGTGAACTTGAGGTCAACAGAGGACACATACTaGTCACAAGTGAACTTGAGG +
Preference number: 5 (lower is better)
Translates to: EVNMQTEDTYLSQVNLRSTEDTY*SQVNLR
Trigger: CCTCAAGTTCACTTGTGACAAGTATGTGTCCTCTGT...TGACCTCAAGTTCACTTGTGACAAGTATGTGTCCTCTGTTTGCATGTTGACTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp ACTATCAAGATCAGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAACAGAGGACACATACTaGTCACAAGTGAACTTGAGG +
Preference number: 5 (lower is better)
Translates to: TIKIRGHHTAITQLKPRTTEDTY*SQVNLR
Trigger: CCTCAAGTTCACTTGTGACAAGTATGTGTCCTCTGT...TGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCTGATCTTGATAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp TTAAACTTCAATGCAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACAGAGGACACATACTaGTCACAAGTGAACTTGAGG +
Preference number: 5 (lower is better)
Translates to: LNFNAEKLALGSPLLLLCTEDTY*SQVNLR
Trigger: CCTCAAGTTCACTTGTGACAAGTATGTGTCCTCTGT...ACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTGCATTGAAGTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp CAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAATACAGACAAGAGAACAATATaGGTAGATGTTGAAGGACAA +
Preference number: 5 (lower is better)
Translates to: QKSWLWAVHCYSFVPHNTDKRTI*VDVEGQ
Trigger: TTGTCCTTCAACATCTACCAATATTGTTCTCTTGTC...TGTATTGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp GGCAGGAAAAAGTTGTCTGTCCCTGTACAGCTCAGAAATACTCATAAAAAGGCCGAAATGGCCTCTCCTTaGACTCTCAATAAAGATCTC +
Preference number: 5 (lower is better)
Translates to: GRKKLSVPVQLRNTHKKAEMASP*TLNKDL
Trigger: GAGATCTTTATTGAGAGTCAAAGGAGAGGCCATTTC...GGCCTTTTTATGAGTATTTCTGAGCTGTACAGGGACAGACAACTTTTTCCTGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000636666.1
ENST00000644342.1
ENST00000646800.1
CDS-3UTR CAA 90 bp CAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAATACAATCATTCTTACCCTATaGATAGAAGAAATGGCCTCT +
Preference number: 5 (lower is better)
Translates to: QKSWLWAVHCYSFVPHNTIILTL*IEEMAS
Trigger: AGAGGCCATTTCTTCTATCAATAGGGTAAGAATGAT...TGTATTGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000636666.1
ENST00000644342.1
ENST00000646800.1
CDS TCA 90 bp TCCTCTTTACCACACTGTTGTTTAGTTTCTGAGGGGGTCCCTGTTTaGGGATCTGGAGGAGCTTTGATTACTTTAGAAAAGCTAAAGAGA +
Preference number: 5 (lower is better)
Translates to: SSLPHCCLVSEGVPV*GSGGALITLEKLKR
Trigger: TCTCTTTAGCTTTTCTAAAGTAATCAAAGCTCCTCCAGATCCTCAAACAGGGACCCCCTCAGAAACTAAACAACAGTGTGGTAAAGAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649674.1
CDS-3UTR CAA 90 bp AATCTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTCCTTCAGCTGCTGTTaGACAAGATTCCTCCTGCTG +
Preference number: 5 (lower is better)
Translates to: NLESLKSDYGRLASLSFCSFSCC*TRFLLL
Trigger: CAGCAGGAGGAATCTTGTCAAACAGCAGCTGAAGGA...GCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp ATTGTCCAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCGTCCGCTCCTTGTTCTaGGTCAAGTCTTCATGTGTA +
Preference number: 5 (lower is better)
Translates to: IVQLRSFYSPCNFCTLLSVRSLF*VKSSCV
Trigger: TACACATGAAGACTTGACCAAGAACAAGGAGCGGAC...GGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTGGACAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000646800.1
CDS-3UTR CAA 90 bp GAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGTTTTCTGATGTCCGCTCCTaGTTCTTGGTCAAGTCTTCA +
Preference number: 5 (lower is better)
Translates to: ESLKSDYGRLASLSFCWFSDVRS*FLVKSS
Trigger: TGAAGACTTGACCAAGAACAAGGAGCGGACATCAGA...AAACCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp ATTGTCCAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCTCTGATGTCCGCTCCTaGTTCTTGGTCAAGTCTTCA +
Preference number: 5 (lower is better)
Translates to: IVQLRSFYSPCNFCTLLSSDVRS*FLVKSS
Trigger: TGAAGACTTGACCAAGAACAAGGAGCGGACATCAGA...GGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTGGACAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000646800.1
CDS-3UTR CAA 90 bp AATCTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTCTGACTCTACTTCTTaGCCTTCTTCCTCGGACACC +
Preference number: 5 (lower is better)
Translates to: NLESLKSDYGRLASLSFCSDSTS*PSSSDT
Trigger: GGTGTCCGAGGAAGAAGGCAAAGAAGTAGAGTCAGA...GCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp GAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGTTTAAAGATGGGTCTGTTTaGAGTTCCGGTTCAGGAGCT +
Preference number: 5 (lower is better)
Translates to: ESLKSDYGRLASLSFCWFKDGSV*SSGSGA
Trigger: AGCTCCTGAACCGGAACTCAAAACAGACCCATCTTT...AAACCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp GGACACATACTTGTCACAAGTGAACTTGAGGTCACAAAGCCATTGATTAAAAACAAAGATGGGTCTGTTTaGAGTTCCGGTTCAGGAGCT +
Preference number: 5 (lower is better)
Translates to: GHILVTSELEVTKPLIKNKDGSV*SSGSGA
Trigger: AGCTCCTGAACCGGAACTCAAAACAGACCCATCTTT...GTTTTTAATCAATGGCTTTGTGACCTCAAGTTCACTTGTGACAAGTATGTGTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp CAGAGACAGTTCTCAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTCCTATTCTTTTACTTCTATTTaGGAGCACTCTTCAAGTCCT +
Preference number: 5 (lower is better)
Translates to: QRQFSEANHLLVAPNSSYSFTSI*EHSSSP
Trigger: AGGACTTGAAGAGTGCTCCAAAATAGAAGTAAAAGA...ATAGGAGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTGAGAACTGTCTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648891.1
CDS-3UTR CAA 90 bp AAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTACCCCACAATACATACTTCTTTTACTTCTATTTaGGAGCACTCTTCAAGTCCT +
Preference number: 5 (lower is better)
Translates to: KAGFGQSIATPLYPTIHTSFTSI*EHSSSP
Trigger: AGGACTTGAAGAGTGCTCCAAAATAGAAGTAAAAGA...AGTATGTATTGTGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp CAGAGACAGTTCTCAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTCCTATATTCTGTTTCTGCTTTaGATTGAGGGCTTTCTTCTT +
Preference number: 5 (lower is better)
Translates to: QRQFSEANHLLVAPNSSYILFLL*IEGFLL
Trigger: AAGAAGAAAGCCCTCAATCAAAAGCAGAAACAGAAT...ATAGGAGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTGAGAACTGTCTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648891.1
CDS-3UTR CAA 90 bp CTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGCTAATAATGCTAAGGTaGCAAAGGAACAGGGCAGAC +
Preference number: 5 (lower is better)
Translates to: LESLKSDYGRLASLSFCWLIMLR*QRNRAD
Trigger: GTCTGCCCTGTTCCTTTGCAACCTTAGCATTATTAG...CCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp TTGGATCCTAGCGCAAGAAATTTGCTTTTGGGAATGGTGTCTGTAGATGTCAATCTAATAATGCTAAGGTaGCAAAGGAACAGGGCAGAC +
Preference number: 5 (lower is better)
Translates to: LDPSARNLLLGMVSVDVNLIMLR*QRNRAD
Trigger: GTCTGCCCTGTTCCTTTGCAACCTTAGCATTATTAG...ATTGACATCTACAGACACCATTCCCAAAAGCAAATTTCTTGCGCTAGGATCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
CDS-3UTR CAA 90 bp CAAAGTACTCACTCCTTCTCCTGTGGGGATTTGCCCATTGATGTTAAGAGTTCGTACATAGACAACTTTTaGGCATTCTCAAGAAACTCC +
Preference number: 5 (lower is better)
Translates to: QSTHSFSCGDLPIDVKSSYIDNF*AFSRNS
Trigger: GGAGTTTCTTGAGAATGCCAAAAAGTTGTCTATGTA...CGAACTCTTAACATCAATGGGCAAATCCCCACAGGAGAAGGAGTGAGTACTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642643.1
ENST00000648891.1
CDS-3UTR CAA 90 bp ACTATCAAGATCAGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACACTCCTTCCAAGTCCTTaGCTTTATGAAGATCAACTC +
Preference number: 5 (lower is better)
Translates to: TIKIRGHHTAITQLKPRTLLPSP*LYEDQL
Trigger: GAGTTGATCTTCATAAAGCAAAGGACTTGGAAGGAG...TGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCTGATCTTGATAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp AGTTCTCAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTCCTATAATTGCACTCCTTCCAAGTCCTTaGCTTTATGAAGATCAACTC +
Preference number: 5 (lower is better)
Translates to: SSQRLIIYWWLQIAPIIALLPSP*LYEDQL
Trigger: GAGTTGATCTTCATAAAGCAAAGGACTTGGAAGGAG...TGCAATTATAGGAGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTGAGAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000645184.1
ENST00000648181.1
ENST00000648891.1
CDS-3UTR CAA 90 bp CAGATATCTGAAGCAACTTCCATGTCTTTGACCCAAAGAAGCTCCAAAAAGAAAACTTTCATACTGCTCTaGCTCTCCAGGCCGAATCTT +
Preference number: 5 (lower is better)
Translates to: QISEATSMSLTQRSSKKKTFILL*LSRPNL
Trigger: AAGATTCGGCCTGGAGAGCAAGAGCAGTATGAAAGT...TTTCTTTTTGGAGCTTCTTTGGGTCAAAGACATGGAAGTTGCTTCAGATATCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp GGACACATACTTGTCACAAGTGAACTTGAGGTCACAAAGCCATTGATTAAAAACACTTTCATACTGCTCTaGCTCTCCAGGCCGAATCTT +
Preference number: 5 (lower is better)
Translates to: GHILVTSELEVTKPLIKNTFILL*LSRPNL
Trigger: AAGATTCGGCCTGGAGAGCAAGAGCAGTATGAAAGT...GTTTTTAATCAATGGCTTTGTGACCTCAAGTTCACTTGTGACAAGTATGTGTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp CAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAGTCACTTTCATACTGCTCTaGCTCTCCAGGCCGAATCTT +
Preference number: 5 (lower is better)
Translates to: QLRSFYSPCNFCTLLSIVTFILL*LSRPNL
Trigger: AAGATTCGGCCTGGAGAGCAAGAGCAGTATGAAAGT...GACTATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR CAA 90 bp CTCTTTCCCTCCCTCCTGTTGTTCATGTCTCACATGGGTACCAAAAGAAAAATGGCAAGAAATTTGCTTTaGGGAATGGTGTCTGTAGAT +
Preference number: 5 (lower is better)
Translates to: LFPSLLLFMSHMGTKRKMARNLL*GMVSVD
Trigger: ATCTACAGACACCATTCCCAAAAGCAAATTTCTTGC...CATTTTTCTTTTGGTACCCATGTGAGACATGAACAACAGGAGGGAGGGAAAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp AGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAGAAGTTCAATGGGCAAGAAATTTGCTTTaGGGAATGGTGTCTGTAGAT +
Preference number: 5 (lower is better)
Translates to: RGHHTAITQLKPRTEVQWARNLL*GMVSVD
Trigger: ATCTACAGACACCATTCCCAAAAGCAAATTTCTTGC...CCATTGAACTTCTGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp ACTATCAAGATCAGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACACCACTGTATCGAAATTaGGATCCTAGCGCAAGAAAT +
Preference number: 5 (lower is better)
Translates to: TIKIRGHHTAITQLKPRTPLYRN*DPSARN
Trigger: ATTTCTTGCGCTAGGATCCAAATTTCGATACAGTGG...TGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCTGATCTTGATAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp TCCATTAGAGCTTTTGGCCCAAAGTGCCTATTTTTCTGTGAGATTTGGTCTCCTCCACTGTATCGAAATTaGGATCCTAGCGCAAGAAAT +
Preference number: 5 (lower is better)
Translates to: SIRAFGPKCLFFCEIWSPPLYRN*DPSARN
Trigger: ATTTCTTGCGCTAGGATCCAAATTTCGATACAGTGG...AGGAGACCAAATCTCACAGAAAAATAGGCACTTTGGGCCAAAAGCTCTAATGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp GAAGTCAACATGCAAACAGAGGACACATACTTGTCACAAGTGAACTTGAGGTCACCACTGTATCGAAATTaGGATCCTAGCGCAAGAAAT +
Preference number: 5 (lower is better)
Translates to: EVNMQTEDTYLSQVNLRSPLYRN*DPSARN
Trigger: ATTTCTTGCGCTAGGATCCAAATTTCGATACAGTGG...TGACCTCAAGTTCACTTGTGACAAGTATGTGTCCTCTGTTTGCATGTTGACTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp GAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGTTTGTGGGGATTTGCCCATaGATGTTAAGAGTTCGGAAG +
Preference number: 5 (lower is better)
Translates to: ESLKSDYGRLASLSFCWFVGICP*MLRVRK
Trigger: CTTCCGAACTCTTAACATCAATGGGCAAATCCCCAC...AAACCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
CDS-3UTR CAA 90 bp CAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAGTCGTGGGGATTTGCCCATaGATGTTAAGAGTTCGGAAG +
Preference number: 5 (lower is better)
Translates to: QLRSFYSPCNFCTLLSIVVGICP*MLRVRK
Trigger: CTTCCGAACTCTTAACATCAATGGGCAAATCCCCAC...GACTATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644470.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR CAA 90 bp GTCCAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAGTGGGGATTTGCCCATaGATGTTAAGAGTTCGGAAG +
Preference number: 5 (lower is better)
Translates to: VQLRSFYSPCNFCTLLSIVGICP*MLRVRK
Trigger: CTTCCGAACTCTTAACATCAATGGGCAAATCCCCAC...TATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTGGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644470.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR CAA 90 bp CTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGTTCTCCTGTGGGGATTaGCCCATTGATGTTAAGAGT +
Preference number: 5 (lower is better)
Translates to: LESLKSDYGRLASLSFCWFSCGD*PIDVKS
Trigger: ACTCTTAACATCAATGGGCAAATCCCCACAGGAGAA...CCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
CDS-3UTR CAA 90 bp GAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGTTTCTCAGATGTGATAGTTaGAGCTGTCAGCAAGACTCC +
Preference number: 5 (lower is better)
Translates to: ESLKSDYGRLASLSFCWFLRCDS*SCQQDS
Trigger: GGAGTCTTGCTGACAGCTCAAACTATCACATCTGAG...AAACCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp CTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGTACAGTCTTGGTAATTaGAGTTGTGGTGGTGCTGCT +
Preference number: 5 (lower is better)
Translates to: LESLKSDYGRLASLSFCWYSLGN*SCGGAA
Trigger: AGCAGCACCACCACAACTCAAATTACCAAGACTGTA...CCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp GGATCAATGAGATCTAGAAGAATCTCTTGGTATAAACTCCCAATAGAAACTGAATGCTCCTTTGCCTCCTaGATGGCTTGTACAAGGACC +
Preference number: 5 (lower is better)
Translates to: GSMRSRRISWYKLPIETECSFAS*MACTRT
Trigger: GGTCCTTGTACAAGCCATCAAGGAGGCAAAGGAGCA...TTCAGTTTCTATTGGGAGTTTATACCAAGAGATTCTTCTAGATCTCATTGATCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp GAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGTTTCAGTGTCTGTTGGGGTaGGAAATAAATGGGCAGAGA +
Preference number: 5 (lower is better)
Translates to: ESLKSDYGRLASLSFCWFQCLLG*EINGQR
Trigger: TCTCTGCCCATTTATTTCCAACCCCAACAGACACTG...AAACCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp GAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGTTTTGTAAGCTGCATTTCTaGTCACCACTCCTGGCAACA +
Preference number: 5 (lower is better)
Translates to: ESLKSDYGRLASLSFCWFCKLHF*SPLLAT
Trigger: TGTTGCCAGGAGTGGTGACAAGAAATGCAGCTTACA...AAACCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR CAA 90 bp ACTATCAAGATCAGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAAATTTCTTCATTTTCTaGCTGGGGCAAGGCTCTTTC +
Preference number: 5 (lower is better)
Translates to: TIKIRGHHTAITQLKPRTNFFIF*LGQGSF
Trigger: GAAAGAGCCTTGCCCCAGCAAGAAAATGAAGAAATT...TGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCTGATCTTGATAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp GAAGTCAACATGCAAACAGAGGACACATACTTGTCACAAGTGAACTTGAGGTCAAATTTCTTCATTTTCTaGCTGGGGCAAGGCTCTTTC +
Preference number: 5 (lower is better)
Translates to: EVNMQTEDTYLSQVNLRSNFFIF*LGQGSF
Trigger: GAAAGAGCCTTGCCCCAGCAAGAAAATGAAGAAATT...TGACCTCAAGTTCACTTGTGACAAGTATGTGTCCTCTGTTTGCATGTTGACTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp AAAGTAGAGGTGGCACTTTTTGAGAGACTTGTGATCCTCAGGGATTGGAATAGAACAGCAATAACACAGTaGAAGCCAAGGACAGAAGTT +
Preference number: 5 (lower is better)
Translates to: KVEVALFERLVILRDWNRTAITQ*KPRTEV
Trigger: AACTTCTGTCCTTGGCTTCAACTGTGTTATTGCTGT...TCTATTCCAATCCCTGAGGATCACAAGTCTCTCAAAAAGTGCCACCTCTACTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR CAA 90 bp AGAAGTCAACATGCAAACAGAGGACACATACTTGTCACAAGTGAACTTGAGGTCACAGCAATAACACAGTaGAAGCCAAGGACAGAAGTT +
Preference number: 5 (lower is better)
Translates to: RSQHANRGHILVTSELEVTAITQ*KPRTEV
Trigger: AACTTCTGTCCTTGGCTTCAACTGTGTTATTGCTGT...GACCTCAAGTTCACTTGTGACAAGTATGTGTCCTCTGTTTGCATGTTGACTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp ACTATCAAGATCAGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACATCCATTGCTACTCCTTaGTACCCCACAATACATACT +
Preference number: 5 (lower is better)
Translates to: TIKIRGHHTAITQLKPRTSIATP*YPTIHT
Trigger: AGTATGTATTGTGGGGTACAAAGGAGTAGCAATGGA...TGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCTGATCTTGATAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp TTCAACACAAGTACACGAACAAACAGGTCTGAAGTATATCAGGAAAACAAAGTAGCTTTGGGCAGTCCATaGCTACTCCTTTGTACCCCA +
Preference number: 5 (lower is better)
Translates to: FNTSTRTNRSEVYQENKVALGSP*LLLCTP
Trigger: TGGGGTACAAAGGAGTAGCAATGGACTGCCCAAAGC...TACTTTGTTTTCCTGATATACTTCAGACCTGTTTGTTCGTGTACTTGTGTTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp GACATTAACCAAATCATCCATATTGGTACATTCAAGTGCCATAAAAAGCAAGCTGCAGAAAAGCTGGCTTaGGGCAGTCCATTGCTACTC +
Preference number: 5 (lower is better)
Translates to: DINQIIHIGTFKCHKKQAAEKLA*GSPLLL
Trigger: GAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTGC...AGCTTGCTTTTTATGGCACTTGAATGTACCAATATGGATGATTTGGTTAATGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp AGAAGTCAACATGCAAACAGAGGACACATACTTGTCACAAGTGAACTTGAGGTCAGAGAGTATCCTGGTTaGTGTGAGATATTGGATAGG +
Preference number: 5 (lower is better)
Translates to: RSQHANRGHILVTSELEVREYPG*CEILDR
Trigger: CCTATCCAATATCTCACACAAACCAGGATACTCTCT...GACCTCAAGTTCACTTGTGACAAGTATGTGTCCTCTGTTTGCATGTTGACTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp ACTATCAAGATCAGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAAGAGAGTATCCTGGTTaGTGTGAGATATTGGATAGG +
Preference number: 5 (lower is better)
Translates to: TIKIRGHHTAITQLKPRTREYPG*CEILDR
Trigger: CCTATCCAATATCTCACACAAACCAGGATACTCTCT...TGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCTGATCTTGATAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp GACATTAACCAAATCATCCATATTGGTACATTCAAGTGCCATAAAAAGCAAGCTCCAGGCAGGAAAAAGTaGTCTGTCCCTGTACAGCTC +
Preference number: 5 (lower is better)
Translates to: DINQIIHIGTFKCHKKQAPGRKK*SVPVQL
Trigger: GAGCTGTACAGGGACAGACAACTTTTTCCTGCCTGG...AGCTTGCTTTTTATGGCACTTGAATGTACCAATATGGATGATTTGGTTAATGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp CAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAGTCGATCTCCGAGGACTCTaGCTGCATTTCAGAAAACTG +
Preference number: 5 (lower is better)
Translates to: QLRSFYSPCNFCTLLSIVDLRGL*LHFRKL
Trigger: CAGTTTTCTGAAATGCAGCAAGAGTCCTCGGAGATC...GACTATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000644342.1
ENST00000646800.1
CDS-3UTR CAA 90 bp GAAGTCAACATGCAAACAGAGGACACATACTTGTCACAAGTGAACTTGAGGTCATCTTTTGAGTCTGCATaGGTCAGCTTCATCCAATAC +
Preference number: 5 (lower is better)
Translates to: EVNMQTEDTYLSQVNLRSSFESA*VSFIQY
Trigger: GTATTGGATGAAGCTGACCAATGCAGACTCAAAAGA...TGACCTCAAGTTCACTTGTGACAAGTATGTGTCCTCTGTTTGCATGTTGACTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636666.1
ENST00000644342.1
ENST00000646800.1
CDS-3UTR CAA 90 bp AAAGTAGAGGTGGCACTTTTTGAGAGACTTGTGATCCTCAGGGATTGGAATAGATCCCCAATTGTCCAATaGAGAAGTTTTTATTCCCCC +
Preference number: 5 (lower is better)
Translates to: KVEVALFERLVILRDWNRSPIVQ*RSFYSP
Trigger: GGGGGAATAAAAACTTCTCAATTGGACAATTGGGGA...TCTATTCCAATCCCTGAGGATCACAAGTCTCTCAAAAAGTGCCACCTCTACTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR CAA 90 bp AGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAGAAGTTCAATGGGGATGTGCAAAGGATTaGGAAGTATCTTTTAGACAC +
Preference number: 5 (lower is better)
Translates to: RGHHTAITQLKPRTEVQWGCAKD*EVSFRH
Trigger: GTGTCTAAAAGATACTTCCAAATCCTTTGCACATCC...CCATTGAACTTCTGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR CAA 90 bp AATCTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCGTCCGCTCCTTGTTCTaGGTCAAGTCTTCATGTGTA +
Preference number: 5 (lower is better)
Translates to: NLESLKSDYGRLASLSFCVRSLF*VKSSCV
Trigger: TACACATGAAGACTTGACCAAGAACAAGGAGCGGAC...GCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp AATCTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTCTGATGTCCGCTCCTaGTTCTTGGTCAAGTCTTCA +
Preference number: 5 (lower is better)
Translates to: NLESLKSDYGRLASLSFCSDVRS*FLVKSS
Trigger: TGAAGACTTGACCAAGAACAAGGAGCGGACATCAGA...GCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp ATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAGTCAATCTGATGTCCGCTCCTaGTTCTTGGTCAAGTCTTCA +
Preference number: 5 (lower is better)
Translates to: IEKFLFPLQFLYSAIHSQSDVRS*FLVKSS
Trigger: TGAAGACTTGACCAAGAACAAGGAGCGGACATCAGA...TTGACTATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000646800.1
CDS-3UTR CAA 90 bp GGATCAATGAGATCTAGAAGAATCTCTTGGTATAAACTCCCAATAGAAACTGAATCTGACTCTACTTCTTaGCCTTCTTCCTCGGACACC +
Preference number: 5 (lower is better)
Translates to: GSMRSRRISWYKLPIETESDSTS*PSSSDT
Trigger: GGTGTCCGAGGAAGAAGGCAAAGAAGTAGAGTCAGA...TTCAGTTTCTATTGGGAGTTTATACCAAGAGATTCTTCTAGATCTCATTGATCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp GAGACATTAACCAAATCATCCATATTGGTACATTCAAGTGCCATAAAAAGCAAGTCTGACTCTACTTCTTaGCCTTCTTCCTCGGACACC +
Preference number: 5 (lower is better)
Translates to: ETLTKSSILVHSSAIKSKSDSTS*PSSSDT
Trigger: GGTGTCCGAGGAAGAAGGCAAAGAAGTAGAGTCAGA...CTTGCTTTTTATGGCACTTGAATGTACCAATATGGATGATTTGGTTAATGTCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp ATCTTAATTCAGAGAAGGGTTTATGTACAGATCTTGAGTAAATCTGTGTTCCAGTCTGACTCTACTTCTTaGCCTTCTTCCTCGGACACC +
Preference number: 5 (lower is better)
Translates to: ILIQRRVYVQILSKSVFQSDSTS*PSSSDT
Trigger: GGTGTCCGAGGAAGAAGGCAAAGAAGTAGAGTCAGA...CTGGAACACAGATTTACTCAAGATCTGTACATAAACCCTTCTCTGAATTAAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp CAGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAGAAGTTCAATGTCTTTTACTTCTATTTaGGAGCACTCTTCAAGTCCT +
Preference number: 5 (lower is better)
Translates to: QRASYSNNTVEAKDRSSMSFTSI*EHSSSP
Trigger: AGGACTTGAAGAGTGCTCCAAAATAGAAGTAAAAGA...CATTGAACTTCTGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp CTCTTTCCCTCCCTCCTGTTGTTCATGTCTCACATGGGTACCAAAAGAAAAATGTCTTTTACTTCTATTTaGGAGCACTCTTCAAGTCCT +
Preference number: 5 (lower is better)
Translates to: LFPSLLLFMSHMGTKRKMSFTSI*EHSSSP
Trigger: AGGACTTGAAGAGTGCTCCAAAATAGAAGTAAAAGA...CATTTTTCTTTTGGTACCCATGTGAGACATGAACAACAGGAGGGAGGGAAAGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp AGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAGAAGTTCAATGGTCTTTTACTTCTATTTaGGAGCACTCTTCAAGTCCT +
Preference number: 5 (lower is better)
Translates to: RGHHTAITQLKPRTEVQWSFTSI*EHSSSP
Trigger: AGGACTTGAAGAGTGCTCCAAAATAGAAGTAAAAGA...CCATTGAACTTCTGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp AAAAATGCACACACCCGAAATGAGTTCAAACCAGCCGAAACAAAACTCAGGCAGATTCTGTTTCTGCTTTaGATTGAGGGCTTTCTTCTT +
Preference number: 5 (lower is better)
Translates to: KNAHTRNEFKPAETKLRQILFLL*IEGFLL
Trigger: AAGAAGAAAGCCCTCAATCAAAAGCAGAAACAGAAT...CTGCCTGAGTTTTGTTTCGGCTGGTTTGAACTCATTTCGGGTGTGTGCATTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp TCTATACACCAGGCAGGAAAAAGTTGTCTGTCCCTGTACAGCTCAGAAATACTCATTCTGTTTCTGCTTTaGATTGAGGGCTTTCTTCTT +
Preference number: 5 (lower is better)
Translates to: SIHQAGKSCLSLYSSEILILFLL*IEGFLL
Trigger: AAGAAGAAAGCCCTCAATCAAAAGCAGAAACAGAAT...GAGTATTTCTGAGCTGTACAGGGACAGACAACTTTTTCCTGCCTGGTGTATAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp ATTGTCCAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCTCCAACAAAGAAACCTaGCAGTGCATGTTCCTGTGT +
Preference number: 5 (lower is better)
Translates to: IVQLRSFYSPCNFCTLLSSNKET*QCMFLC
Trigger: ACACAGGAACATGCACTGCAAGGTTTCTTTGTTGGA...GGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTGGACAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000646800.1
CDS-3UTR CAA 90 bp TCCATTAGAGCTTTTGGCCCAAAGTGCCTATTTTTCTGTGAGATTTGGTCTCCTTCGTTTAAGCAAATCTaGTCCCTTAGCATGTTTCTC +
Preference number: 5 (lower is better)
Translates to: SIRAFGPKCLFFCEIWSPSFKQI*SLSMFL
Trigger: GAGAAACATGCTAAGGGACAAGATTTGCTTAAACGA...AGGAGACCAAATCTCACAGAAAAATAGGCACTTTGGGCCAAAAGCTCTAATGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp TTAAACTTCAATGCAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTTCGTTTAAGCAAATCTaGTCCCTTAGCATGTTTCTC +
Preference number: 5 (lower is better)
Translates to: LNFNAEKLALGSPLLLLCSFKQI*SLSMFL
Trigger: GAGAAACATGCTAAGGGACAAGATTTGCTTAAACGA...ACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTGCATTGAAGTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp GGACACATACTTGTCACAAGTGAACTTGAGGTCACAAAGCCATTGATTAAAAACCTAATAATGCTAAGGTaGCAAAGGAACAGGGCAGAC +
Preference number: 5 (lower is better)
Translates to: GHILVTSELEVTKPLIKNLIMLR*QRNRAD
Trigger: GTCTGCCCTGTTCCTTTGCAACCTTAGCATTATTAG...GTTTTTAATCAATGGCTTTGTGACCTCAAGTTCACTTGTGACAAGTATGTGTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp ATTACTTTGGTGCTGCCAATCACTAATTGGGCAATGCCAATAATGAAGCATTCTCTAATAATGCTAAGGTaGCAAAGGAACAGGGCAGAC +
Preference number: 5 (lower is better)
Translates to: ITLVLPITNWAMPIMKHSLIMLR*QRNRAD
Trigger: GTCTGCCCTGTTCCTTTGCAACCTTAGCATTATTAG...AGAATGCTTCATTATTGGCATTGCCCAATTAGTGATTGGCAGCACCAAAGTAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000646800.1
CDS-3UTR CAA 90 bp AGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAGAAGTTCAATGGTACATAGACAACTTTTaGGCATTCTCAAGAAACTCC +
Preference number: 5 (lower is better)
Translates to: RGHHTAITQLKPRTEVQWYIDNF*AFSRNS
Trigger: GGAGTTTCTTGAGAATGCCAAAAAGTTGTCTATGTA...CCATTGAACTTCTGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp CTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGCTCCTTCCAAGTCCTTaGCTTTATGAAGATCAACTC +
Preference number: 5 (lower is better)
Translates to: LESLKSDYGRLASLSFCWLLPSP*LYEDQL
Trigger: GAGTTGATCTTCATAAAGCAAAGGACTTGGAAGGAG...CCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp GAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGTTTTCTCCAGGCCGAATCTaGATGAAAAAGCTACTACGT +
Preference number: 5 (lower is better)
Translates to: ESLKSDYGRLASLSFCWFSPGRI*MKKLLR
Trigger: ACGTAGTAGCTTTTTCATCAAGATTCGGCCTGGAGA...AAACCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp CAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAGTCTCTCCAGGCCGAATCTaGATGAAAAAGCTACTACGT +
Preference number: 5 (lower is better)
Translates to: QLRSFYSPCNFCTLLSIVSPGRI*MKKLLR
Trigger: ACGTAGTAGCTTTTTCATCAAGATTCGGCCTGGAGA...GACTATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR CAA 90 bp ATTACTTTGGTGCTGCCAATCACTAATTGGGCAATGCCAATAATGAAGCATTCTTCTCCAGGCCGAATCTaGATGAAAAAGCTACTACGT +
Preference number: 5 (lower is better)
Translates to: ITLVLPITNWAMPIMKHSSPGRI*MKKLLR
Trigger: ACGTAGTAGCTTTTTCATCAAGATTCGGCCTGGAGA...AGAATGCTTCATTATTGGCATTGCCCAATTAGTGATTGGCAGCACCAAAGTAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR CAA 90 bp TTGGCAGTGTTACCTTTAGGTAATACAAAGCTGGAATGCCCAATATTTTTCCTCTCTCCAGGCCGAATCTaGATGAAAAAGCTACTACGT +
Preference number: 5 (lower is better)
Translates to: LAVLPLGNTKLECPIFFLSPGRI*MKKLLR
Trigger: ACGTAGTAGCTTTTTCATCAAGATTCGGCCTGGAGA...GAGGAAAAATATTGGGCATTCCAGCTTTGTATTACCTAAAGGTAACACTGCCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000636666.1
ENST00000644342.1
ENST00000646800.1
CDS-3UTR CAA 90 bp AATCTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCACTTTCATACTGCTCTaGCTCTCCAGGCCGAATCTT +
Preference number: 5 (lower is better)
Translates to: NLESLKSDYGRLASLSFCTFILL*LSRPNL
Trigger: AAGATTCGGCCTGGAGAGCAAGAGCAGTATGAAAGT...GCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp ATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAGTCAAACTTTCATACTGCTCTaGCTCTCCAGGCCGAATCTT +
Preference number: 5 (lower is better)
Translates to: IEKFLFPLQFLYSAIHSQTFILL*LSRPNL
Trigger: AAGATTCGGCCTGGAGAGCAAGAGCAGTATGAAAGT...TTGACTATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR CAA 90 bp AGAAGTCAACATGCAAACAGAGGACACATACTTGTCACAAGTGAACTTGAGGTCGCAAGAAATTTGCTTTaGGGAATGGTGTCTGTAGAT +
Preference number: 5 (lower is better)
Translates to: RSQHANRGHILVTSELEVARNLL*GMVSVD
Trigger: ATCTACAGACACCATTCCCAAAAGCAAATTTCTTGC...GACCTCAAGTTCACTTGTGACAAGTATGTGTCCTCTGTTTGCATGTTGACTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp AGTTCTCAGAGGCTAATCATCTACTGGTGGCTCCAAATAGCTCCTATAATTGCAGCAAGAAATTTGCTTTaGGGAATGGTGTCTGTAGAT +
Preference number: 5 (lower is better)
Translates to: SSQRLIIYWWLQIAPIIAARNLL*GMVSVD
Trigger: ATCTACAGACACCATTCCCAAAAGCAAATTTCTTGC...TGCAATTATAGGAGCTATTTGGAGCCACCAGTAGATGATTAGCCTCTGAGAACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642643.1
ENST00000645184.1
ENST00000648181.1
ENST00000648891.1
CDS-3UTR CAA 90 bp GAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGTTTCCTAGCGCAAGAAATTaGCTTTTGGGAATGGTGTCT +
Preference number: 5 (lower is better)
Translates to: ESLKSDYGRLASLSFCWFPSARN*LLGMVS
Trigger: AGACACCATTCCCAAAAGCAAATTTCTTGCGCTAGG...AAACCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp CTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGCCACTGTATCGAAATTaGGATCCTAGCGCAAGAAAT +
Preference number: 5 (lower is better)
Translates to: LESLKSDYGRLASLSFCWPLYRN*DPSARN
Trigger: ATTTCTTGCGCTAGGATCCAAATTTCGATACAGTGG...CCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp ACTCCTTTGTACCCCACAATACATACTCTACAAAGAGTAACATTTGACAGAAAAGTGTTTGGTCACCATTaGAGGTGGGTACTGTCACCT +
Preference number: 5 (lower is better)
Translates to: TPLYPTIHTLQRVTFDRKVFGHH*RWVLSP
Trigger: AGGTGACAGTACCCACCTCAAATGGTGACCAAACAC...TTTTCTGTCAAATGTTACTCTTTGTAGAGTATGTATTGTGGGGTACAAAGGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp AATCTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCGTGGGGATTTGCCCATaGATGTTAAGAGTTCGGAAG +
Preference number: 5 (lower is better)
Translates to: NLESLKSDYGRLASLSFCVGICP*MLRVRK
Trigger: CTTCCGAACTCTTAACATCAATGGGCAAATCCCCAC...GCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
CDS-3UTR CAA 90 bp ATTACTTTGGTGCTGCCAATCACTAATTGGGCAATGCCAATAATGAAGCATTCTTTCTCCTGTGGGGATTaGCCCATTGATGTTAAGAGT +
Preference number: 5 (lower is better)
Translates to: ITLVLPITNWAMPIMKHSFSCGD*PIDVKS
Trigger: ACTCTTAACATCAATGGGCAAATCCCCACAGGAGAA...AGAATGCTTCATTATTGGCATTGCCCAATTAGTGATTGGCAGCACCAAAGTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR CAA 90 bp CTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGTCACTTTTCACAGCATaGGCATTATCTGAGATGGTG +
Preference number: 5 (lower is better)
Translates to: LESLKSDYGRLASLSFCWSLFTA*ALSEMV
Trigger: CACCATCTCAGATAATGCCAATGCTGTGAAAAGTGA...CCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp CAGATATCTGAAGCAACTTCCATGTCTTTGACCCAAAGAAGCTCCAAAAAGAAAGCAACTTCCATGTCTTaGACCCAAAGAAGCTCCAAA +
Preference number: 5 (lower is better)
Translates to: QISEATSMSLTQRSSKKKATSMS*TQRSSK
Trigger: TTTGGAGCTTCTTTGGGTCAAAGACATGGAAGTTGC...TTTCTTTTTGGAGCTTCTTTGGGTCAAAGACATGGAAGTTGCTTCAGATATCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp GAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGTTTGCAACTTCCATGTCTTaGACCCAAAGAAGCTCCAAA +
Preference number: 5 (lower is better)
Translates to: ESLKSDYGRLASLSFCWFATSMS*TQRSSK
Trigger: TTTGGAGCTTCTTTGGGTCAAAGACATGGAAGTTGC...AAACCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp CTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGGTTCCATTAGAGCTTTaGGCCCAAAGTGCCTATTTT +
Preference number: 5 (lower is better)
Translates to: LESLKSDYGRLASLSFCWVPLEL*AQSAYF
Trigger: AAAATAGGCACTTTGGGCCAAAAGCTCTAATGGAAC...CCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp GGATCAATGAGATCTAGAAGAATCTCTTGGTATAAACTCCCAATAGAAACTGAATTGAGGCCAATGTGTTaGTGGGAAGCAGTTGGAAGG +
Preference number: 5 (lower is better)
Translates to: GSMRSRRISWYKLPIETELRPMC*WEAVGR
Trigger: CCTTCCAACTGCTTCCCACAAACACATTGGCCTCAA...TTCAGTTTCTATTGGGAGTTTATACCAAGAGATTCTTCTAGATCTCATTGATCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp AATCTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGTAAGCTGCATTTCTaGTCACCACTCCTGGCAACA +
Preference number: 5 (lower is better)
Translates to: NLESLKSDYGRLASLSFCCKLHF*SPLLAT
Trigger: TGTTGCCAGGAGTGGTGACAAGAAATGCAGCTTACA...GCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR CAA 90 bp CTTCATCCAATACAAGGGCTTGGCCATTCTCCTCTTAATCATTCTTACCCTATTACAGCAATAACACAGTaGAAGCCAAGGACAGAAGTT +
Preference number: 5 (lower is better)
Translates to: LHPIQGLGHSPLNHSYPITAITQ*KPRTEV
Trigger: AACTTCTGTCCTTGGCTTCAACTGTGTTATTGCTGT...AATAGGGTAAGAATGATTAAGAGGAGAATGGCCAAGCCCTTGTATTGGATGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636666.1
ENST00000644342.1
ENST00000646800.1
CDS-3UTR CAA 90 bp TTAAACTTCAATGCAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTAAAGAGTTAAAGCTTTaGGGAAGATTACCAACCTGC +
Preference number: 5 (lower is better)
Translates to: LNFNAEKLALGSPLLLLCKELKL*GRLPTC
Trigger: GCAGGTTGGTAATCTTCCCAAAAGCTTTAACTCTTT...ACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTGCATTGAAGTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp GGCAGGAAAAAGTTGTCTGTCCCTGTACAGCTCAGAAATACTCATAAAAAGGCCGTTTATGTACAGATCTaGAGTAAATCTGTGTTCCAG +
Preference number: 5 (lower is better)
Translates to: GRKKLSVPVQLRNTHKKAVYVQI*SKSVFQ
Trigger: CTGGAACACAGATTTACTCAAGATCTGTACATAAAC...GGCCTTTTTATGAGTATTTCTGAGCTGTACAGGGACAGACAACTTTTTCCTGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp TCTATACACCAGGCAGGAAAAAGTTGTCTGTCCCTGTACAGCTCAGAAATACTCGTTTATGTACAGATCTaGAGTAAATCTGTGTTCCAG +
Preference number: 5 (lower is better)
Translates to: SIHQAGKSCLSLYSSEILVYVQI*SKSVFQ
Trigger: CTGGAACACAGATTTACTCAAGATCTGTACATAAAC...GAGTATTTCTGAGCTGTACAGGGACAGACAACTTTTTCCTGCCTGGTGTATAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp AGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAGAAGTTCAATGGGTTTATGTACAGATCTaGAGTAAATCTGTGTTCCAG +
Preference number: 5 (lower is better)
Translates to: RGHHTAITQLKPRTEVQWVYVQI*SKSVFQ
Trigger: CTGGAACACAGATTTACTCAAGATCTGTACATAAAC...CCATTGAACTTCTGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp CAGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAGAAGTTCAATGGTTTATGTACAGATCTaGAGTAAATCTGTGTTCCAG +
Preference number: 5 (lower is better)
Translates to: QRASYSNNTVEAKDRSSMVYVQI*SKSVFQ
Trigger: CTGGAACACAGATTTACTCAAGATCTGTACATAAAC...CATTGAACTTCTGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp AGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAGAAGTTCAATGGACCAAATCATCCATATaGGTACATTCAAGTGCCATA +
Preference number: 5 (lower is better)
Translates to: RGHHTAITQLKPRTEVQWTKSSI*VHSSAI
Trigger: TATGGCACTTGAATGTACCAATATGGATGATTTGGT...CCATTGAACTTCTGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp TCTATACACCAGGCAGGAAAAAGTTGTCTGTCCCTGTACAGCTCAGAAATACTCACCAAATCATCCATATaGGTACATTCAAGTGCCATA +
Preference number: 5 (lower is better)
Translates to: SIHQAGKSCLSLYSSEILTKSSI*VHSSAI
Trigger: TATGGCACTTGAATGTACCAATATGGATGATTTGGT...GAGTATTTCTGAGCTGTACAGGGACAGACAACTTTTTCCTGCCTGGTGTATAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp GGCAGGAAAAAGTTGTCTGTCCCTGTACAGCTCAGAAATACTCATAAAAAGGCCACCAAATCATCCATATaGGTACATTCAAGTGCCATA +
Preference number: 5 (lower is better)
Translates to: GRKKLSVPVQLRNTHKKATKSSI*VHSSAI
Trigger: TATGGCACTTGAATGTACCAATATGGATGATTTGGT...GGCCTTTTTATGAGTATTTCTGAGCTGTACAGGGACAGACAACTTTTTCCTGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp ATTACTTTGGTGCTGCCAATCACTAATTGGGCAATGCCAATAATGAAGCATTCTCCTTCTCTGATCAGTTaGGAAGTTCAACACTGGTTC +
Preference number: 5 (lower is better)
Translates to: ITLVLPITNWAMPIMKHSPSLIS*EVQHWF
Trigger: GAACCAGTGTTGAACTTCCAAACTGATCAGAGAAGG...AGAATGCTTCATTATTGGCATTGCCCAATTAGTGATTGGCAGCACCAAAGTAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR CAA 90 bp CAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAGTCCCTTCTCTGATCAGTTaGGAAGTTCAACACTGGTTC +
Preference number: 5 (lower is better)
Translates to: QLRSFYSPCNFCTLLSIVPSLIS*EVQHWF
Trigger: GAACCAGTGTTGAACTTCCAAACTGATCAGAGAAGG...GACTATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644470.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR CAA 90 bp GTCCAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATACCTTCTCTGATCAGTTaGGAAGTTCAACACTGGTTC +
Preference number: 5 (lower is better)
Translates to: VQLRSFYSPCNFCTLLSIPSLIS*EVQHWF
Trigger: GAACCAGTGTTGAACTTCCAAACTGATCAGAGAAGG...TATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTGGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644470.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR CAA 90 bp ACTATCAAGATCAGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACATCGTTTAAGCAAATCTaGTCCCTTAGCATGTTTCTG +
Preference number: 5 (lower is better)
Translates to: TIKIRGHHTAITQLKPRTSFKQI*SLSMFL
Trigger: CAGAAACATGCTAAGGGACAAGATTTGCTTAAACGA...TGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCTGATCTTGATAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644780.1
CDS TCA 90 bp ATTAGACCTGCATCATTGAATAAATTACTACCTGGAAACTTCGAATaGGGGTGGGGAACTGGTTACCCACATGAAAGTCAAGAAATGATC +
Preference number: 5 (lower is better)
Translates to: IRPASLNKLLPGNFE*GWGTGYPHESQEMI
Trigger: GATCATTTCTTGACTTTCATGTGGGTAACCAGTTCCCCACCCTCATTCGAAGTTTCCAGGTAGTAATTTATTCAATGATGCAGGTCTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460378.1
CDS CCA 90 bp AGCCACATTTCCTCCACTAAGTACGAATGGTACATGAAACAGCAGTaGCAATGGAATGCATTACCCTCGAATTCATTAACTTCTTTCAAA +
Preference number: 5 (lower is better)
Translates to: SHISSTKYEWYMKQQ*QWNALPSNSLTSFK
Trigger: TTTGAAAGAAGTTAATGAATTCGAGGGTAATGCATTCCATTGCCACTGCTGTTTCATGTACCATTCGTACTTAGTGGAGGAAATGTGGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460378.1
CDS-3UTR CAA 90 bp GGATCAATGAGATCTAGAAGAATCTCTTGGTATAAACTCCCAATAGAAACTGAAGTCCGCTCCTTGTTCTaGGTCAAGTCTTCATGTGTA +
Preference number: 5 (lower is better)
Translates to: GSMRSRRISWYKLPIETEVRSLF*VKSSCV
Trigger: TACACATGAAGACTTGACCAAGAACAAGGAGCGGAC...TTCAGTTTCTATTGGGAGTTTATACCAAGAGATTCTTCTAGATCTCATTGATCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp TTCAACACAAGTACACGAACAAACAGGTCTGAAGTATATCAGGAAAACAAAGTAGTCCGCTCCTTGTTCTaGGTCAAGTCTTCATGTGTA +
Preference number: 5 (lower is better)
Translates to: FNTSTRTNRSEVYQENKVVRSLF*VKSSCV
Trigger: TACACATGAAGACTTGACCAAGAACAAGGAGCGGAC...TACTTTGTTTTCCTGATATACTTCAGACCTGTTTGTTCGTGTACTTGTGTTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp GAGACATTAACCAAATCATCCATATTGGTACATTCAAGTGCCATAAAAAGCAAGGTCCGCTCCTTGTTCTaGGTCAAGTCTTCATGTGTA +
Preference number: 5 (lower is better)
Translates to: ETLTKSSILVHSSAIKSKVRSLF*VKSSCV
Trigger: TACACATGAAGACTTGACCAAGAACAAGGAGCGGAC...CTTGCTTTTTATGGCACTTGAATGTACCAATATGGATGATTTGGTTAATGTCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp TTCAACACAAGTACACGAACAAACAGGTCTGAAGTATATCAGGAAAACAAAGTATCTGATGTCCGCTCCTaGTTCTTGGTCAAGTCTTCA +
Preference number: 5 (lower is better)
Translates to: FNTSTRTNRSEVYQENKVSDVRS*FLVKSS
Trigger: TGAAGACTTGACCAAGAACAAGGAGCGGACATCAGA...TACTTTGTTTTCCTGATATACTTCAGACCTGTTTGTTCGTGTACTTGTGTTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp GGATCAATGAGATCTAGAAGAATCTCTTGGTATAAACTCCCAATAGAAACTGAAAAAGATGGGTCTGTTTaGAGTTCCGGTTCAGGAGCT +
Preference number: 5 (lower is better)
Translates to: GSMRSRRISWYKLPIETEKDGSV*SSGSGA
Trigger: AGCTCCTGAACCGGAACTCAAAACAGACCCATCTTT...TTCAGTTTCTATTGGGAGTTTATACCAAGAGATTCTTCTAGATCTCATTGATCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp ACTATCAAGATCAGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACATCTTTTACTTCTATTTaGGAGCACTCTTCAAGTCCT +
Preference number: 5 (lower is better)
Translates to: TIKIRGHHTAITQLKPRTSFTSI*EHSSSP
Trigger: AGGACTTGAAGAGTGCTCCAAAATAGAAGTAAAAGA...TGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCTGATCTTGATAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp TTAAACTTCAATGCAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTATTCTGTTTCTGCTTTaGATTGAGGGCTTTCTTCTT +
Preference number: 5 (lower is better)
Translates to: LNFNAEKLALGSPLLLLCILFLL*IEGFLL
Trigger: AAGAAGAAAGCCCTCAATCAAAAGCAGAAACAGAAT...ACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTGCATTGAAGTTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp AATCTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTCCAACAAAGAAACCTaGCAGTGCATGTTCCTGTGT +
Preference number: 5 (lower is better)
Translates to: NLESLKSDYGRLASLSFCSNKET*QCMFLC
Trigger: ACACAGGAACATGCACTGCAAGGTTTCTTTGTTGGA...GCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp AATCTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCCTAATAATGCTAAGGTaGCAAAGGAACAGGGCAGAC +
Preference number: 5 (lower is better)
Translates to: NLESLKSDYGRLASLSFCLIMLR*QRNRAD
Trigger: GTCTGCCCTGTTCCTTTGCAACCTTAGCATTATTAG...GCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp TTAAACTTCAATGCAGAAAAGCTGGCTTTGGGCAGTCCATTGCTACTCCTTTGTTACATAGACAACTTTTaGGCATTCTCAAGAAACTCC +
Preference number: 5 (lower is better)
Translates to: LNFNAEKLALGSPLLLLCYIDNF*AFSRNS
Trigger: GGAGTTTCTTGAGAATGCCAAAAAGTTGTCTATGTA...ACAAAGGAGTAGCAATGGACTGCCCAAAGCCAGCTTTTCTGCATTGAAGTTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp TTAGGGGCCTCCTTGGTTTACTATATAATTGTGGGGAACCAGTCCAGATATTTCTACATAGACAACTTTTaGGCATTCTCAAGAAACTCC +
Preference number: 5 (lower is better)
Translates to: LGASLVYYIIVGNQSRYFYIDNF*AFSRNS
Trigger: GGAGTTTCTTGAGAATGCCAAAAAGTTGTCTATGTA...GAAATATCTGGACTGGTTCCCCACAATTATATAGTAAACCAAGGAGGCCCCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000645184.1
ENST00000648181.1
CDS-3UTR CAA 90 bp GGACACATACTTGTCACAAGTGAACTTGAGGTCACAAAGCCATTGATTAAAAACCTCCTTCCAAGTCCTTaGCTTTATGAAGATCAACTC +
Preference number: 5 (lower is better)
Translates to: GHILVTSELEVTKPLIKNLLPSP*LYEDQL
Trigger: GAGTTGATCTTCATAAAGCAAAGGACTTGGAAGGAG...GTTTTTAATCAATGGCTTTGTGACCTCAAGTTCACTTGTGACAAGTATGTGTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp AATCTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTCTCCAGGCCGAATCTaGATGAAAAAGCTACTACGT +
Preference number: 5 (lower is better)
Translates to: NLESLKSDYGRLASLSFCSPGRI*MKKLLR
Trigger: ACGTAGTAGCTTTTTCATCAAGATTCGGCCTGGAGA...GCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAGATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp AATTGTCCAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCTCTCCAGGCCGAATCTaGATGAAAAAGCTACTACGT +
Preference number: 5 (lower is better)
Translates to: NCPIEKFLFPLQFLYSAISPGRI*MKKLLR
Trigger: ACGTAGTAGCTTTTTCATCAAGATTCGGCCTGGAGA...GATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTGGACAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR CAA 90 bp ACTCCTTTGTACCCCACAATACATACTCTACAAAGAGTAACATTTGACAGAAAAACTTTCATACTGCTCTaGCTCTCCAGGCCGAATCTT +
Preference number: 5 (lower is better)
Translates to: TPLYPTIHTLQRVTFDRKTFILL*LSRPNL
Trigger: AAGATTCGGCCTGGAGAGCAAGAGCAGTATGAAAGT...TTTTCTGTCAAATGTTACTCTTTGTAGAGTATGTATTGTGGGGTACAAAGGAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp ATATTGGCAGTGTTACCTTTAGGTAATACAAAGCTGGAATGCCCAATATTTTTCACTTTCATACTGCTCTaGCTCTCCAGGCCGAATCTT +
Preference number: 5 (lower is better)
Translates to: ILAVLPLGNTKLECPIFFTFILL*LSRPNL
Trigger: AAGATTCGGCCTGGAGAGCAAGAGCAGTATGAAAGT...GAAAAATATTGGGCATTCCAGCTTTGTATTACCTAAAGGTAACACTGCCAATAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000644342.1
ENST00000646800.1
CDS-3UTR CAA 90 bp TTCAACACAAGTACACGAACAAACAGGTCTGAAGTATATCAGGAAAACAAAGTAACTTTCATACTGCTCTaGCTCTCCAGGCCGAATCTT +
Preference number: 5 (lower is better)
Translates to: FNTSTRTNRSEVYQENKVTFILL*LSRPNL
Trigger: AAGATTCGGCCTGGAGAGCAAGAGCAGTATGAAAGT...TACTTTGTTTTCCTGATATACTTCAGACCTGTTTGTTCGTGTACTTGTGTTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp CTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGGCAAGAAATTTGCTTTaGGGAATGGTGTCTGTAGAT +
Preference number: 5 (lower is better)
Translates to: LESLKSDYGRLASLSFCWARNLL*GMVSVD
Trigger: ATCTACAGACACCATTCCCAAAAGCAAATTTCTTGC...CCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp AATCTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCCCTAGCGCAAGAAATTaGCTTTTGGGAATGGTGTCT +
Preference number: 5 (lower is better)
Translates to: NLESLKSDYGRLASLSFCPSARN*LLGMVS
Trigger: AGACACCATTCCCAAAAGCAAATTTCTTGCGCTAGG...GCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp GAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGTTTCCACTGTATCGAAATTaGGATCCTAGCGCAAGAAAT +
Preference number: 5 (lower is better)
Translates to: ESLKSDYGRLASLSFCWFPLYRN*DPSARN
Trigger: ATTTCTTGCGCTAGGATCCAAATTTCGATACAGTGG...AAACCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp GGATCAATGAGATCTAGAAGAATCTCTTGGTATAAACTCCCAATAGAAACTGAAGTGGGGATTTGCCCATaGATGTTAAGAGTTCGGAAG +
Preference number: 5 (lower is better)
Translates to: GSMRSRRISWYKLPIETEVGICP*MLRVRK
Trigger: CTTCCGAACTCTTAACATCAATGGGCAAATCCCCAC...TTCAGTTTCTATTGGGAGTTTATACCAAGAGATTCTTCTAGATCTCATTGATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
CDS-3UTR CAA 90 bp ACTCCTTTGTACCCCACAATACATACTCTACAAAGAGTAACATTTGACAGAAAAGTGGGGATTTGCCCATaGATGTTAAGAGTTCGGAAG +
Preference number: 5 (lower is better)
Translates to: TPLYPTIHTLQRVTFDRKVGICP*MLRVRK
Trigger: CTTCCGAACTCTTAACATCAATGGGCAAATCCCCAC...TTTTCTGTCAAATGTTACTCTTTGTAGAGTATGTATTGTGGGGTACAAAGGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp ATCTTAATTCAGAGAAGGGTTTATGTACAGATCTTGAGTAAATCTGTGTTCCAGGTGGGGATTTGCCCATaGATGTTAAGAGTTCGGAAG +
Preference number: 5 (lower is better)
Translates to: ILIQRRVYVQILSKSVFQVGICP*MLRVRK
Trigger: CTTCCGAACTCTTAACATCAATGGGCAAATCCCCAC...CTGGAACACAGATTTACTCAAGATCTGTACATAAACCCTTCTCTGAATTAAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp AATCTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTTCTCCTGTGGGGATTaGCCCATTGATGTTAAGAGT +
Preference number: 5 (lower is better)
Translates to: NLESLKSDYGRLASLSFCFSCGD*PIDVKS
Trigger: ACTCTTAACATCAATGGGCAAATCCCCACAGGAGAA...GCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
CDS-3UTR CAA 90 bp ATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAGTCAATTCTCCTGTGGGGATTaGCCCATTGATGTTAAGAGT +
Preference number: 5 (lower is better)
Translates to: IEKFLFPLQFLYSAIHSQFSCGD*PIDVKS
Trigger: ACTCTTAACATCAATGGGCAAATCCCCACAGGAGAA...TTGACTATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644470.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR CAA 90 bp AATTGTCCAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCTTCTCCTGTGGGGATTaGCCCATTGATGTTAAGAGT +
Preference number: 5 (lower is better)
Translates to: NCPIEKFLFPLQFLYSAIFSCGD*PIDVKS
Trigger: ACTCTTAACATCAATGGGCAAATCCCCACAGGAGAA...GATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTGGACAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644470.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR CAA 90 bp GGATCAATGAGATCTAGAAGAATCTCTTGGTATAAACTCCCAATAGAAACTGAACTCAGATGTGATAGTTaGAGCTGTCAGCAAGACTCC +
Preference number: 5 (lower is better)
Translates to: GSMRSRRISWYKLPIETELRCDS*SCQQDS
Trigger: GGAGTCTTGCTGACAGCTCAAACTATCACATCTGAG...TTCAGTTTCTATTGGGAGTTTATACCAAGAGATTCTTCTAGATCTCATTGATCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp AATCTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTACAGTCTTGGTAATTaGAGTTGTGGTGGTGCTGCT +
Preference number: 5 (lower is better)
Translates to: NLESLKSDYGRLASLSFCYSLGN*SCGGAA
Trigger: AGCAGCACCACCACAACTCAAATTACCAAGACTGTA...GCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp GGATCAATGAGATCTAGAAGAATCTCTTGGTATAAACTCCCAATAGAAACTGAACAGTGTCTGTTGGGGTaGGAAATAAATGGGCAGAGA +
Preference number: 5 (lower is better)
Translates to: GSMRSRRISWYKLPIETEQCLLG*EINGQR
Trigger: TCTCTGCCCATTTATTTCCAACCCCAACAGACACTG...TTCAGTTTCTATTGGGAGTTTATACCAAGAGATTCTTCTAGATCTCATTGATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp GAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGTTTGTTCCATTAGAGCTTTaGGCCCAAAGTGCCTATTTT +
Preference number: 5 (lower is better)
Translates to: ESLKSDYGRLASLSFCWFVPLEL*AQSAYF
Trigger: AAAATAGGCACTTTGGGCCAAAAGCTCTAATGGAAC...AAACCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp ATTGTCCAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCAATTTCTTCATTTTCTaGCTGGGGCAAGGCTCTTTC +
Preference number: 5 (lower is better)
Translates to: IVQLRSFYSPCNFCTLLSNFFIF*LGQGSF
Trigger: GAAAGAGCCTTGCCCCAGCAAGAAAATGAAGAAATT...GGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTGGACAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR CAA 90 bp GTCCAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAAGAAGTTCAATGGTCTaGACATTTCAGATGAGCACC +
Preference number: 5 (lower is better)
Translates to: VQLRSFYSPCNFCTLLSIRSSMV*TFQMST
Trigger: GGTGCTCATCTGAAATGTCAAGACCATTGAACTTCT...TATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTGGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR CAA 90 bp TTGGCAGTGTTACCTTTAGGTAATACAAAGCTGGAATGCCCAATATTTTTCCTCACAGCAATAACACAGTaGAAGCCAAGGACAGAAGTT +
Preference number: 5 (lower is better)
Translates to: LAVLPLGNTKLECPIFFLTAITQ*KPRTEV
Trigger: AACTTCTGTCCTTGGCTTCAACTGTGTTATTGCTGT...GAGGAAAAATATTGGGCATTCCAGCTTTGTATTACCTAAAGGTAACACTGCCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000636666.1
ENST00000644342.1
ENST00000646800.1
CDS-3UTR CAA 90 bp GGACACATACTTGTCACAAGTGAACTTGAGGTCACAAAGCCATTGATTAAAAACTCCATTGCTACTCCTTaGTACCCCACAATACATACT +
Preference number: 5 (lower is better)
Translates to: GHILVTSELEVTKPLIKNSIATP*YPTIHT
Trigger: AGTATGTATTGTGGGGTACAAAGGAGTAGCAATGGA...GTTTTTAATCAATGGCTTTGTGACCTCAAGTTCACTTGTGACAAGTATGTGTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp ACTATCAAGATCAGAGGGCATCATACAGCAATAACACAGTTGAAGCCAAGGACAGTTTATGTACAGATCTaGAGTAAATCTGTGTTCCAG +
Preference number: 5 (lower is better)
Translates to: TIKIRGHHTAITQLKPRTVYVQI*SKSVFQ
Trigger: CTGGAACACAGATTTACTCAAGATCTGTACATAAAC...TGTCCTTGGCTTCAACTGTGTTATTGCTGTATGATGCCCTCTGATCTTGATAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp GAAGTCAACATGCAAACAGAGGACACATACTTGTCACAAGTGAACTTGAGGTCAACCAAATCATCCATATaGGTACATTCAAGTGCCATA +
Preference number: 5 (lower is better)
Translates to: EVNMQTEDTYLSQVNLRSTKSSI*VHSSAI
Trigger: TATGGCACTTGAATGTACCAATATGGATGATTTGGT...TGACCTCAAGTTCACTTGTGACAAGTATGTGTCCTCTGTTTGCATGTTGACTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp AGAAGTCAACATGCAAACAGAGGACACATACTTGTCACAAGTGAACTTGAGGTCGACAAGAGAACAATATaGGTAGATGTTGAAGGACAA +
Preference number: 5 (lower is better)
Translates to: RSQHANRGHILVTSELEVDKRTI*VDVEGQ
Trigger: TTGTCCTTCAACATCTACCAATATTGTTCTCTTGTC...GACCTCAAGTTCACTTGTGACAAGTATGTGTCCTCTGTTTGCATGTTGACTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp AGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAGTCAAGACATCTTTTGAGTCTGCATaGGTCAGCTTCATCCAATAC +
Preference number: 5 (lower is better)
Translates to: RSFYSPCNFCTLLSIVKTSFESA*VSFIQY
Trigger: GTATTGGATGAAGCTGACCAATGCAGACTCAAAAGA...TGTCTTGACTATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000644342.1
ENST00000646800.1
CDS-3UTR CAA 90 bp CAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAGTCTCCCCAATTGTCCAATaGAGAAGTTTTTATTCCCCC +
Preference number: 5 (lower is better)
Translates to: QLRSFYSPCNFCTLLSIVSPIVQ*RSFYSP
Trigger: GGGGGAATAAAAACTTCTCAATTGGACAATTGGGGA...GACTATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 7 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644470.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR CAA 90 bp ATTACTTTGGTGCTGCCAATCACTAATTGGGCAATGCCAATAATGAAGCATTCTTCCCCAATTGTCCAATaGAGAAGTTTTTATTCCCCC +
Preference number: 5 (lower is better)
Translates to: ITLVLPITNWAMPIMKHSSPIVQ*RSFYSP
Trigger: GGGGGAATAAAAACTTCTCAATTGGACAATTGGGGA...AGAATGCTTCATTATTGGCATTGCCCAATTAGTGATTGGCAGCACCAAAGTAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS CCA 90 bp AGCAAGGAAAAGATGAACACACTTAACCAGCTTCATACTGACAGCTaGAGTTTTGTTAAGTTATCAGAGAAGAAAGCATTTCTAGCCATG +
Preference number: 5 (lower is better)
Translates to: SKEKMNTLNQLHTDS*SFVKLSEKKAFLAM
Trigger: CATGGCTAGAAATGCTTTCTTCTCTGATAACTTAACAAAACTCCAGCTGTCAGTATGAAGCTGGTTAAGTGTGTTCATCTTTTCCTTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460378.1
CDS-3UTR CAA 90 bp CTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGTCTTTTACTTCTATTTaGGAGCACTCTTCAAGTCCT +
Preference number: 5 (lower is better)
Translates to: LESLKSDYGRLASLSFCWSFTSI*EHSSSP
Trigger: AGGACTTGAAGAGTGCTCCAAAATAGAAGTAAAAGA...CCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp CACTGTATCGAAATTTGGATCCTAGCGCAAGAAATTTGCTTTTGGGAATGGTGTATTCTGTTTCTGCTTTaGATTGAGGGCTTTCTTCTT +
Preference number: 5 (lower is better)
Translates to: HCIEIWILAQEICFWEWCILFLL*IEGFLL
Trigger: AAGAAGAAAGCCCTCAATCAAAAGCAGAAACAGAAT...ACACCATTCCCAAAAGCAAATTTCTTGCGCTAGGATCCAAATTTCGATACAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642643.1
ENST00000643155.1
ENST00000648891.1
CDS-3UTR CAA 90 bp GGATCAATGAGATCTAGAAGAATCTCTTGGTATAAACTCCCAATAGAAACTGAATCCAACAAAGAAACCTaGCAGTGCATGTTCCTGTGT +
Preference number: 5 (lower is better)
Translates to: GSMRSRRISWYKLPIETESNKET*QCMFLC
Trigger: ACACAGGAACATGCACTGCAAGGTTTCTTTGTTGGA...TTCAGTTTCTATTGGGAGTTTATACCAAGAGATTCTTCTAGATCTCATTGATCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp ATCTTAATTCAGAGAAGGGTTTATGTACAGATCTTGAGTAAATCTGTGTTCCAGTCCAACAAAGAAACCTaGCAGTGCATGTTCCTGTGT +
Preference number: 5 (lower is better)
Translates to: ILIQRRVYVQILSKSVFQSNKET*QCMFLC
Trigger: ACACAGGAACATGCACTGCAAGGTTTCTTTGTTGGA...CTGGAACACAGATTTACTCAAGATCTGTACATAAACCCTTCTCTGAATTAAGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp TTCAACACAAGTACACGAACAAACAGGTCTGAAGTATATCAGGAAAACAAAGTATCCAACAAAGAAACCTaGCAGTGCATGTTCCTGTGT +
Preference number: 5 (lower is better)
Translates to: FNTSTRTNRSEVYQENKVSNKET*QCMFLC
Trigger: ACACAGGAACATGCACTGCAAGGTTTCTTTGTTGGA...TACTTTGTTTTCCTGATATACTTCAGACCTGTTTGTTCGTGTACTTGTGTTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp CAGATATCTGAAGCAACTTCCATGTCTTTGACCCAAAGAAGCTCCAAAAAGAAATCGTTTAAGCAAATCTaGTCCCTTAGCATGTTTCTC +
Preference number: 5 (lower is better)
Translates to: QISEATSMSLTQRSSKKKSFKQI*SLSMFL
Trigger: GAGAAACATGCTAAGGGACAAGATTTGCTTAAACGA...TTTCTTTTTGGAGCTTCTTTGGGTCAAAGACATGGAAGTTGCTTCAGATATCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp AGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAGTCAAGACATCGTTTAAGCAAATCTaGTCCCTTAGCATGTTTCTC +
Preference number: 5 (lower is better)
Translates to: RSFYSPCNFCTLLSIVKTSFKQI*SLSMFL
Trigger: GAGAAACATGCTAAGGGACAAGATTTGCTTAAACGA...TGTCTTGACTATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000646800.1
CDS-3UTR CAA 90 bp ACTCCTTTGTACCCCACAATACATACTCTACAAAGAGTAACATTTGACAGAAAACTAATAATGCTAAGGTaGCAAAGGAACAGGGCAGAC +
Preference number: 5 (lower is better)
Translates to: TPLYPTIHTLQRVTFDRKLIMLR*QRNRAD
Trigger: GTCTGCCCTGTTCCTTTGCAACCTTAGCATTATTAG...TTTTCTGTCAAATGTTACTCTTTGTAGAGTATGTATTGTGGGGTACAAAGGAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp GAGACATTAACCAAATCATCCATATTGGTACATTCAAGTGCCATAAAAAGCAAGCTAATAATGCTAAGGTaGCAAAGGAACAGGGCAGAC +
Preference number: 5 (lower is better)
Translates to: ETLTKSSILVHSSAIKSKLIMLR*QRNRAD
Trigger: GTCTGCCCTGTTCCTTTGCAACCTTAGCATTATTAG...CTTGCTTTTTATGGCACTTGAATGTACCAATATGGATGATTTGGTTAATGTCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp CTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGTACATAGACAACTTTTaGGCATTCTCAAGAAACTCC +
Preference number: 5 (lower is better)
Translates to: LESLKSDYGRLASLSFCWYIDNF*AFSRNS
Trigger: GGAGTTTCTTGAGAATGCCAAAAAGTTGTCTATGTA...CCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp GGATCAATGAGATCTAGAAGAATCTCTTGGTATAAACTCCCAATAGAAACTGAATCTCCAGGCCGAATCTaGATGAAAAAGCTACTACGT +
Preference number: 5 (lower is better)
Translates to: GSMRSRRISWYKLPIETESPGRI*MKKLLR
Trigger: ACGTAGTAGCTTTTTCATCAAGATTCGGCCTGGAGA...TTCAGTTTCTATTGGGAGTTTATACCAAGAGATTCTTCTAGATCTCATTGATCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp GACATTAACCAAATCATCCATATTGGTACATTCAAGTGCCATAAAAAGCAAGCTTCTCCAGGCCGAATCTaGATGAAAAAGCTACTACGT +
Preference number: 5 (lower is better)
Translates to: DINQIIHIGTFKCHKKQASPGRI*MKKLLR
Trigger: ACGTAGTAGCTTTTTCATCAAGATTCGGCCTGGAGA...AGCTTGCTTTTTATGGCACTTGAATGTACCAATATGGATGATTTGGTTAATGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp ATCTTAATTCAGAGAAGGGTTTATGTACAGATCTTGAGTAAATCTGTGTTCCAGTCTCCAGGCCGAATCTaGATGAAAAAGCTACTACGT +
Preference number: 5 (lower is better)
Translates to: ILIQRRVYVQILSKSVFQSPGRI*MKKLLR
Trigger: ACGTAGTAGCTTTTTCATCAAGATTCGGCCTGGAGA...CTGGAACACAGATTTACTCAAGATCTGTACATAAACCCTTCTCTGAATTAAGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp GAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGTTTGCAAGAAATTTGCTTTaGGGAATGGTGTCTGTAGAT +
Preference number: 5 (lower is better)
Translates to: ESLKSDYGRLASLSFCWFARNLL*GMVSVD
Trigger: ATCTACAGACACCATTCCCAAAAGCAAATTTCTTGC...AAACCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp GGACACATACTTGTCACAAGTGAACTTGAGGTCACAAAGCCATTGATTAAAAACGCAAGAAATTTGCTTTaGGGAATGGTGTCTGTAGAT +
Preference number: 5 (lower is better)
Translates to: GHILVTSELEVTKPLIKNARNLL*GMVSVD
Trigger: ATCTACAGACACCATTCCCAAAAGCAAATTTCTTGC...GTTTTTAATCAATGGCTTTGTGACCTCAAGTTCACTTGTGACAAGTATGTGTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp AGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAGTCAAGACAGCAAGAAATTTGCTTTaGGGAATGGTGTCTGTAGAT +
Preference number: 5 (lower is better)
Translates to: RSFYSPCNFCTLLSIVKTARNLL*GMVSVD
Trigger: ATCTACAGACACCATTCCCAAAAGCAAATTTCTTGC...TGTCTTGACTATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR CAA 90 bp GTCCAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAGCAAGAAATTTGCTTTaGGGAATGGTGTCTGTAGAT +
Preference number: 5 (lower is better)
Translates to: VQLRSFYSPCNFCTLLSIARNLL*GMVSVD
Trigger: ATCTACAGACACCATTCCCAAAAGCAAATTTCTTGC...TATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTGGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR CAA 90 bp GGATCAATGAGATCTAGAAGAATCTCTTGGTATAAACTCCCAATAGAAACTGAACCTAGCGCAAGAAATTaGCTTTTGGGAATGGTGTCT +
Preference number: 5 (lower is better)
Translates to: GSMRSRRISWYKLPIETEPSARN*LLGMVS
Trigger: AGACACCATTCCCAAAAGCAAATTTCTTGCGCTAGG...TTCAGTTTCTATTGGGAGTTTATACCAAGAGATTCTTCTAGATCTCATTGATCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp ATCTTAATTCAGAGAAGGGTTTATGTACAGATCTTGAGTAAATCTGTGTTCCAGCCTAGCGCAAGAAATTaGCTTTTGGGAATGGTGTCT +
Preference number: 5 (lower is better)
Translates to: ILIQRRVYVQILSKSVFQPSARN*LLGMVS
Trigger: AGACACCATTCCCAAAAGCAAATTTCTTGCGCTAGG...CTGGAACACAGATTTACTCAAGATCTGTACATAAACCCTTCTCTGAATTAAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp TTCAACACAAGTACACGAACAAACAGGTCTGAAGTATATCAGGAAAACAAAGTACCTAGCGCAAGAAATTaGCTTTTGGGAATGGTGTCT +
Preference number: 5 (lower is better)
Translates to: FNTSTRTNRSEVYQENKVPSARN*LLGMVS
Trigger: AGACACCATTCCCAAAAGCAAATTTCTTGCGCTAGG...TACTTTGTTTTCCTGATATACTTCAGACCTGTTTGTTCGTGTACTTGTGTTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp ATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAGTCAACCACTGTATCGAAATTaGGATCCTAGCGCAAGAAAT +
Preference number: 5 (lower is better)
Translates to: IEKFLFPLQFLYSAIHSQPLYRN*DPSARN
Trigger: ATTTCTTGCGCTAGGATCCAAATTTCGATACAGTGG...TTGACTATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR CAA 90 bp AATCTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCCCACTGTATCGAAATTaGGATCCTAGCGCAAGAAAT +
Preference number: 5 (lower is better)
Translates to: NLESLKSDYGRLASLSFCPLYRN*DPSARN
Trigger: ATTTCTTGCGCTAGGATCCAAATTTCGATACAGTGG...GCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp TTCAACACAAGTACACGAACAAACAGGTCTGAAGTATATCAGGAAAACAAAGTATTCTCCTGTGGGGATTaGCCCATTGATGTTAAGAGT +
Preference number: 5 (lower is better)
Translates to: FNTSTRTNRSEVYQENKVFSCGD*PIDVKS
Trigger: ACTCTTAACATCAATGGGCAAATCCCCACAGGAGAA...TACTTTGTTTTCCTGATATACTTCAGACCTGTTTGTTCGTGTACTTGTGTTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp ACTCCTTTGTACCCCACAATACATACTCTACAAAGAGTAACATTTGACAGAAAATTCTCCTGTGGGGATTaGCCCATTGATGTTAAGAGT +
Preference number: 5 (lower is better)
Translates to: TPLYPTIHTLQRVTFDRKFSCGD*PIDVKS
Trigger: ACTCTTAACATCAATGGGCAAATCCCCACAGGAGAA...TTTTCTGTCAAATGTTACTCTTTGTAGAGTATGTATTGTGGGGTACAAAGGAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp ATCTTAATTCAGAGAAGGGTTTATGTACAGATCTTGAGTAAATCTGTGTTCCAGTTCTCCTGTGGGGATTaGCCCATTGATGTTAAGAGT +
Preference number: 5 (lower is better)
Translates to: ILIQRRVYVQILSKSVFQFSCGD*PIDVKS
Trigger: ACTCTTAACATCAATGGGCAAATCCCCACAGGAGAA...CTGGAACACAGATTTACTCAAGATCTGTACATAAACCCTTCTCTGAATTAAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp AATCTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTCACTTTTCACAGCATaGGCATTATCTGAGATGGTG +
Preference number: 5 (lower is better)
Translates to: NLESLKSDYGRLASLSFCSLFTA*ALSEMV
Trigger: CACCATCTCAGATAATGCCAATGCTGTGAAAAGTGA...GCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp GGATCAATGAGATCTAGAAGAATCTCTTGGTATAAACTCCCAATAGAAACTGAATACAGTCTTGGTAATTaGAGTTGTGGTGGTGCTGCT +
Preference number: 5 (lower is better)
Translates to: GSMRSRRISWYKLPIETEYSLGN*SCGGAA
Trigger: AGCAGCACCACCACAACTCAAATTACCAAGACTGTA...TTCAGTTTCTATTGGGAGTTTATACCAAGAGATTCTTCTAGATCTCATTGATCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp GAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGTTTAGCTTCTTTATCATTTaGCTGGTTTCTCTTGGATGG +
Preference number: 5 (lower is better)
Translates to: ESLKSDYGRLASLSFCWFSFFII*LVSLGW
Trigger: CCATCCAAGAGAAACCAGCAAAATGATAAAGAAGCT...AAACCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp CAGATATCTGAAGCAACTTCCATGTCTTTGACCCAAAGAAGCTCCAAAAAGAAAAGCTTCTTTATCATTTaGCTGGTTTCTCTTGGATGG +
Preference number: 5 (lower is better)
Translates to: QISEATSMSLTQRSSKKKSFFII*LVSLGW
Trigger: CCATCCAAGAGAAACCAGCAAAATGATAAAGAAGCT...TTTCTTTTTGGAGCTTCTTTGGGTCAAAGACATGGAAGTTGCTTCAGATATCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp ATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAGTCAAAATTTCTTCATTTTCTaGCTGGGGCAAGGCTCTTTC +
Preference number: 5 (lower is better)
Translates to: IEKFLFPLQFLYSAIHSQNFFIF*LGQGSF
Trigger: GAAAGAGCCTTGCCCCAGCAAGAAAATGAAGAAATT...TTGACTATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR CAA 90 bp AATTGTCCAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCAGAAGTTCAATGGTCTaGACATTTCAGATGAGCACC +
Preference number: 5 (lower is better)
Translates to: NCPIEKFLFPLQFLYSAIRSSMV*TFQMST
Trigger: GGTGCTCATCTGAAATGTCAAGACCATTGAACTTCT...GATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTGGACAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR CAA 90 bp AGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAGTCAAGACAAAAGAGTTAAAGCTTTaGGGAAGATTACCAACCTGC +
Preference number: 5 (lower is better)
Translates to: RSFYSPCNFCTLLSIVKTKELKL*GRLPTC
Trigger: GCAGGTTGGTAATCTTCCCAAAAGCTTTAACTCTTT...TGTCTTGACTATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR CAA 90 bp ATCTTAATTCAGAGAAGGGTTTATGTACAGATCTTGAGTAAATCTGTGTTCCAGACAGAGGACACATACTaGTCACAAGTGAACTTGAGG +
Preference number: 5 (lower is better)
Translates to: ILIQRRVYVQILSKSVFQTEDTY*SQVNLR
Trigger: CCTCAAGTTCACTTGTGACAAGTATGTGTCCTCTGT...CTGGAACACAGATTTACTCAAGATCTGTACATAAACCCTTCTCTGAATTAAGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp TTCAACACAAGTACACGAACAAACAGGTCTGAAGTATATCAGGAAAACAAAGTAACAGAGGACACATACTaGTCACAAGTGAACTTGAGG +
Preference number: 5 (lower is better)
Translates to: FNTSTRTNRSEVYQENKVTEDTY*SQVNLR
Trigger: CCTCAAGTTCACTTGTGACAAGTATGTGTCCTCTGT...TACTTTGTTTTCCTGATATACTTCAGACCTGTTTGTTCGTGTACTTGTGTTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp CTTCATCCAATACAAGGGCTTGGCCATTCTCCTCTTAATCATTCTTACCCTATTATCATTCTTACCCTATaGATAGAAGAAATGGCCTCT +
Preference number: 5 (lower is better)
Translates to: LHPIQGLGHSPLNHSYPIIILTL*IEEMAS
Trigger: AGAGGCCATTTCTTCTATCAATAGGGTAAGAATGAT...AATAGGGTAAGAATGATTAAGAGGAGAATGGCCAAGCCCTTGTATTGGATGAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636666.1
ENST00000644342.1
ENST00000646800.1
CDS-3UTR CAA 90 bp GAGACATTAACCAAATCATCCATATTGGTACATTCAAGTGCCATAAAAAGCAAGATCCAATACAAGGGCTaGGCCATTCTCCTCTTAATC +
Preference number: 5 (lower is better)
Translates to: ETLTKSSILVHSSAIKSKIQYKG*AILLLI
Trigger: GATTAAGAGGAGAATGGCCAAGCCCTTGTATTGGAT...CTTGCTTTTTATGGCACTTGAATGTACCAATATGGATGATTTGGTTAATGTCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000636666.1
ENST00000644342.1
ENST00000646800.1
CDS-3UTR CAA 90 bp TTCAACACAAGTACACGAACAAACAGGTCTGAAGTATATCAGGAAAACAAAGTACCTTCTCTGATCAGTTaGGAAGTTCAACACTGGTTC +
Preference number: 5 (lower is better)
Translates to: FNTSTRTNRSEVYQENKVPSLIS*EVQHWF
Trigger: GAACCAGTGTTGAACTTCCAAACTGATCAGAGAAGG...TACTTTGTTTTCCTGATATACTTCAGACCTGTTTGTTCGTGTACTTGTGTTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR CAA 90 bp AGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAGTCAAGACATCACTGGCTTTCCCCTaGCTATGTTATTTATTCTTC +
Preference number: 5 (lower is better)
Translates to: RSFYSPCNFCTLLSIVKTSLAFP*LCYLFF
Trigger: GAAGAATAAATAACATAGCAAGGGGAAAGCCAGTGA...TGTCTTGACTATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR CAA 90 bp CAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAGTCTCACTGGCTTTCCCCTaGCTATGTTATTTATTCTTC +
Preference number: 5 (lower is better)
Translates to: QLRSFYSPCNFCTLLSIVSLAFP*LCYLFF
Trigger: GAAGAATAAATAACATAGCAAGGGGAAAGCCAGTGA...GACTATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR CAA 90 bp GTCCAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATATCACTGGCTTTCCCCTaGCTATGTTATTTATTCTTC +
Preference number: 5 (lower is better)
Translates to: VQLRSFYSPCNFCTLLSISLAFP*LCYLFF
Trigger: GAAGAATAAATAACATAGCAAGGGGAAAGCCAGTGA...TATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTGGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR CAA 90 bp GGACACATACTTGTCACAAGTGAACTTGAGGTCACAAAGCCATTGATTAAAAACGGATGTGCAAAGGATTaGGAAGTATCTTTTAGACAC +
Preference number: 5 (lower is better)
Translates to: GHILVTSELEVTKPLIKNGCAKD*EVSFRH
Trigger: GTGTCTAAAAGATACTTCCAAATCCTTTGCACATCC...GTTTTTAATCAATGGCTTTGTGACCTCAAGTTCACTTGTGACAAGTATGTGTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR CAA 90 bp CAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAGTCGGATGTGCAAAGGATTaGGAAGTATCTTTTAGACAC +
Preference number: 5 (lower is better)
Translates to: QLRSFYSPCNFCTLLSIVGCAKD*EVSFRH
Trigger: GTGTCTAAAAGATACTTCCAAATCCTTTGCACATCC...GACTATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS GCA 90 bp TATTTTACAGATGGTAAAACTAGAGCTCAGGTTGGTAATATAAGTTaGTCAAGGACATATAACCAATTAGGTCGCAGAGTCAGGATTCAG +
Preference number: 5 (lower is better)
Translates to: YFTDGKTRAQVGNIS*SRTYNQLGRRVRIQ
Trigger: CTGAATCCTGACTCTGCGACCTAATTGGTTATATGTCCTTGAGCAACTTATATTACCAACCTGAGCTCTAGTTTTACCATCTGTAAAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649674.1
CDS CCA 90 bp ATTTCCTCCACTAAGTACGAATGGTACATGAAACAGCAGTGGCAATaGAATGCATTACCCTCGAATTCATTAACTTCTTTCAAATCAATG +
Preference number: 5 (lower is better)
Translates to: ISSTKYEWYMKQQWQ*NALPSNSLTSFKSM
Trigger: CATTGATTTGAAAGAAGTTAATGAATTCGAGGGTAATGCATTCCATTGCCACTGCTGTTTCATGTACCATTCGTACTTAGTGGAGGAAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460378.1
CDS-3UTR CAA 90 bp GAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGTTTTCTTTTACTTCTATTTaGGAGCACTCTTCAAGTCCT +
Preference number: 5 (lower is better)
Translates to: ESLKSDYGRLASLSFCWFSFTSI*EHSSSP
Trigger: AGGACTTGAAGAGTGCTCCAAAATAGAAGTAAAAGA...AAACCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp GGACACATACTTGTCACAAGTGAACTTGAGGTCACAAAGCCATTGATTAAAAACTCTTTTACTTCTATTTaGGAGCACTCTTCAAGTCCT +
Preference number: 5 (lower is better)
Translates to: GHILVTSELEVTKPLIKNSFTSI*EHSSSP
Trigger: AGGACTTGAAGAGTGCTCCAAAATAGAAGTAAAAGA...GTTTTTAATCAATGGCTTTGTGACCTCAAGTTCACTTGTGACAAGTATGTGTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp ATTGTCCAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCTCTTTTACTTCTATTTaGGAGCACTCTTCAAGTCCT +
Preference number: 5 (lower is better)
Translates to: IVQLRSFYSPCNFCTLLSSFTSI*EHSSSP
Trigger: AGGACTTGAAGAGTGCTCCAAAATAGAAGTAAAAGA...GGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTGGACAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000646800.1
CDS-3UTR CAA 90 bp GAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGTTTATTCTGTTTCTGCTTTaGATTGAGGGCTTTCTTCTT +
Preference number: 5 (lower is better)
Translates to: ESLKSDYGRLASLSFCWFILFLL*IEGFLL
Trigger: AAGAAGAAAGCCCTCAATCAAAAGCAGAAACAGAAT...AAACCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp GGACACATACTTGTCACAAGTGAACTTGAGGTCACAAAGCCATTGATTAAAAACATTCTGTTTCTGCTTTaGATTGAGGGCTTTCTTCTT +
Preference number: 5 (lower is better)
Translates to: GHILVTSELEVTKPLIKNILFLL*IEGFLL
Trigger: AAGAAGAAAGCCCTCAATCAAAAGCAGAAACAGAAT...GTTTTTAATCAATGGCTTTGTGACCTCAAGTTCACTTGTGACAAGTATGTGTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp AATCTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTCGTTTAAGCAAATCTaGTCCCTTAGCATGTTTCTC +
Preference number: 5 (lower is better)
Translates to: NLESLKSDYGRLASLSFCSFKQI*SLSMFL
Trigger: GAGAAACATGCTAAGGGACAAGATTTGCTTAAACGA...GCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343067.9
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp GAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTGGTTTTACATAGACAACTTTTaGGCATTCTCAAGAAACTCC +
Preference number: 5 (lower is better)
Translates to: ESLKSDYGRLASLSFCWFYIDNF*AFSRNS
Trigger: GGAGTTTCTTGAGAATGCCAAAAAGTTGTCTATGTA...AAACCAGCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp GGATCAATGAGATCTAGAAGAATCTCTTGGTATAAACTCCCAATAGAAACTGAACTCCTTCCAAGTCCTTaGCTTTATGAAGATCAACTC +
Preference number: 5 (lower is better)
Translates to: GSMRSRRISWYKLPIETELLPSP*LYEDQL
Trigger: GAGTTGATCTTCATAAAGCAAAGGACTTGGAAGGAG...TTCAGTTTCTATTGGGAGTTTATACCAAGAGATTCTTCTAGATCTCATTGATCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp ATCTTAATTCAGAGAAGGGTTTATGTACAGATCTTGAGTAAATCTGTGTTCCAGCTCCTTCCAAGTCCTTaGCTTTATGAAGATCAACTC +
Preference number: 5 (lower is better)
Translates to: ILIQRRVYVQILSKSVFQLLPSP*LYEDQL
Trigger: GAGTTGATCTTCATAAAGCAAAGGACTTGGAAGGAG...CTGGAACACAGATTTACTCAAGATCTGTACATAAACCCTTCTCTGAATTAAGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp GAGACATTAACCAAATCATCCATATTGGTACATTCAAGTGCCATAAAAAGCAAGCTCCTTCCAAGTCCTTaGCTTTATGAAGATCAACTC +
Preference number: 5 (lower is better)
Translates to: ETLTKSSILVHSSAIKSKLLPSP*LYEDQL
Trigger: GAGTTGATCTTCATAAAGCAAAGGACTTGGAAGGAG...CTTGCTTTTTATGGCACTTGAATGTACCAATATGGATGATTTGGTTAATGTCTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp ACTCCTTTGTACCCCACAATACATACTCTACAAAGAGTAACATTTGACAGAAAACTCCTTCCAAGTCCTTaGCTTTATGAAGATCAACTC +
Preference number: 5 (lower is better)
Translates to: TPLYPTIHTLQRVTFDRKLLPSP*LYEDQL
Trigger: GAGTTGATCTTCATAAAGCAAAGGACTTGGAAGGAG...TTTTCTGTCAAATGTTACTCTTTGTAGAGTATGTATTGTGGGGTACAAAGGAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp TTCAACACAAGTACACGAACAAACAGGTCTGAAGTATATCAGGAAAACAAAGTACTCCTTCCAAGTCCTTaGCTTTATGAAGATCAACTC +
Preference number: 5 (lower is better)
Translates to: FNTSTRTNRSEVYQENKVLLPSP*LYEDQL
Trigger: GAGTTGATCTTCATAAAGCAAAGGACTTGGAAGGAG...TACTTTGTTTTCCTGATATACTTCAGACCTGTTTGTTCGTGTACTTGTGTTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp GACATTAACCAAATCATCCATATTGGTACATTCAAGTGCCATAAAAAGCAAGCTCTCCTTCCAAGTCCTTaGCTTTATGAAGATCAACTC +
Preference number: 5 (lower is better)
Translates to: DINQIIHIGTFKCHKKQALLPSP*LYEDQL
Trigger: GAGTTGATCTTCATAAAGCAAAGGACTTGGAAGGAG...AGCTTGCTTTTTATGGCACTTGAATGTACCAATATGGATGATTTGGTTAATGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp GGATCAATGAGATCTAGAAGAATCTCTTGGTATAAACTCCCAATAGAAACTGAACCACTGTATCGAAATTaGGATCCTAGCGCAAGAAAT +
Preference number: 5 (lower is better)
Translates to: GSMRSRRISWYKLPIETEPLYRN*DPSARN
Trigger: ATTTCTTGCGCTAGGATCCAAATTTCGATACAGTGG...TTCAGTTTCTATTGGGAGTTTATACCAAGAGATTCTTCTAGATCTCATTGATCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp GAGACATTAACCAAATCATCCATATTGGTACATTCAAGTGCCATAAAAAGCAAGCCACTGTATCGAAATTaGGATCCTAGCGCAAGAAAT +
Preference number: 5 (lower is better)
Translates to: ETLTKSSILVHSSAIKSKPLYRN*DPSARN
Trigger: ATTTCTTGCGCTAGGATCCAAATTTCGATACAGTGG...CTTGCTTTTTATGGCACTTGAATGTACCAATATGGATGATTTGGTTAATGTCTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp TTCAACACAAGTACACGAACAAACAGGTCTGAAGTATATCAGGAAAACAAAGTACCACTGTATCGAAATTaGGATCCTAGCGCAAGAAAT +
Preference number: 5 (lower is better)
Translates to: FNTSTRTNRSEVYQENKVPLYRN*DPSARN
Trigger: ATTTCTTGCGCTAGGATCCAAATTTCGATACAGTGG...TACTTTGTTTTCCTGATATACTTCAGACCTGTTTGTTCGTGTACTTGTGTTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp AATCTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCAGCTTCTTTATCATTTaGCTGGTTTCTCTTGGATGG +
Preference number: 5 (lower is better)
Translates to: NLESLKSDYGRLASLSFCSFFII*LVSLGW
Trigger: CCATCCAAGAGAAACCAGCAAAATGATAAAGAAGCT...GCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp GGATCAATGAGATCTAGAAGAATCTCTTGGTATAAACTCCCAATAGAAACTGAAGAGTCCTCATGTGGCTaGGAGGAAATCTTTATTTCT +
Preference number: 5 (lower is better)
Translates to: GSMRSRRISWYKLPIETEESSCG*EEIFIS
Trigger: AGAAATAAAGATTTCCTCCAAGCCACATGAGGACTC...TTCAGTTTCTATTGGGAGTTTATACCAAGAGATTCTTCTAGATCTCATTGATCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343067.9
ENST00000373798.5
ENST00000642937.2
ENST00000647103.1
CDS-3UTR CAA 90 bp ACTCCTTTGTACCCCACAATACATACTCTACAAAGAGTAACATTTGACAGAAAAAATTTCTTCATTTTCTaGCTGGGGCAAGGCTCTTTC +
Preference number: 5 (lower is better)
Translates to: TPLYPTIHTLQRVTFDRKNFFIF*LGQGSF
Trigger: GAAAGAGCCTTGCCCCAGCAAGAAAATGAAGAAATT...TTTTCTGTCAAATGTTACTCTTTGTAGAGTATGTATTGTGGGGTACAAAGGAGT
38% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp ACTCCTTTGTACCCCACAATACATACTCTACAAAGAGTAACATTTGACAGAAAAAGAAGTTCAATGGTCTaGACATTTCAGATGAGCACC +
Preference number: 5 (lower is better)
Translates to: TPLYPTIHTLQRVTFDRKRSSMV*TFQMST
Trigger: GGTGCTCATCTGAAATGTCAAGACCATTGAACTTCT...TTTTCTGTCAAATGTTACTCTTTGTAGAGTATGTATTGTGGGGTACAAAGGAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp GACATTAACCAAATCATCCATATTGGTACATTCAAGTGCCATAAAAAGCAAGCTAGAAGTTCAATGGTCTaGACATTTCAGATGAGCACC +
Preference number: 5 (lower is better)
Translates to: DINQIIHIGTFKCHKKQARSSMV*TFQMST
Trigger: GGTGCTCATCTGAAATGTCAAGACCATTGAACTTCT...AGCTTGCTTTTTATGGCACTTGAATGTACCAATATGGATGATTTGGTTAATGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp ACTCCTTTGTACCCCACAATACATACTCTACAAAGAGTAACATTTGACAGAAAAACAGCAATAACACAGTaGAAGCCAAGGACAGAAGTT +
Preference number: 5 (lower is better)
Translates to: TPLYPTIHTLQRVTFDRKTAITQ*KPRTEV
Trigger: AACTTCTGTCCTTGGCTTCAACTGTGTTATTGCTGT...TTTTCTGTCAAATGTTACTCTTTGTAGAGTATGTATTGTGGGGTACAAAGGAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp GAGACATTAACCAAATCATCCATATTGGTACATTCAAGTGCCATAAAAAGCAAGACAGCAATAACACAGTaGAAGCCAAGGACAGAAGTT +
Preference number: 5 (lower is better)
Translates to: ETLTKSSILVHSSAIKSKTAITQ*KPRTEV
Trigger: AACTTCTGTCCTTGGCTTCAACTGTGTTATTGCTGT...CTTGCTTTTTATGGCACTTGAATGTACCAATATGGATGATTTGGTTAATGTCTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp GACATTAACCAAATCATCCATATTGGTACATTCAAGTGCCATAAAAAGCAAGCTACAGCAATAACACAGTaGAAGCCAAGGACAGAAGTT +
Preference number: 5 (lower is better)
Translates to: DINQIIHIGTFKCHKKQATAITQ*KPRTEV
Trigger: AACTTCTGTCCTTGGCTTCAACTGTGTTATTGCTGT...AGCTTGCTTTTTATGGCACTTGAATGTACCAATATGGATGATTTGGTTAATGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp GAGACATTAACCAAATCATCCATATTGGTACATTCAAGTGCCATAAAAAGCAAGTCCATTGCTACTCCTTaGTACCCCACAATACATACT +
Preference number: 5 (lower is better)
Translates to: ETLTKSSILVHSSAIKSKSIATP*YPTIHT
Trigger: AGTATGTATTGTGGGGTACAAAGGAGTAGCAATGGA...CTTGCTTTTTATGGCACTTGAATGTACCAATATGGATGATTTGGTTAATGTCTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp ATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAGTCAAAAAGAGTTAAAGCTTTaGGGAAGATTACCAACCTGC +
Preference number: 5 (lower is better)
Translates to: IEKFLFPLQFLYSAIHSQKELKL*GRLPTC
Trigger: GCAGGTTGGTAATCTTCCCAAAAGCTTTAACTCTTT...TTGACTATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR CAA 90 bp ATCTTAATTCAGAGAAGGGTTTATGTACAGATCTTGAGTAAATCTGTGTTCCAGAGAGAGTATCCTGGTTaGTGTGAGATATTGGATAGG +
Preference number: 5 (lower is better)
Translates to: ILIQRRVYVQILSKSVFQREYPG*CEILDR
Trigger: CCTATCCAATATCTCACACAAACCAGGATACTCTCT...CTGGAACACAGATTTACTCAAGATCTGTACATAAACCCTTCTCTGAATTAAGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp GACATTAACCAAATCATCCATATTGGTACATTCAAGTGCCATAAAAAGCAAGCTAGAGAGTATCCTGGTTaGTGTGAGATATTGGATAGG +
Preference number: 5 (lower is better)
Translates to: DINQIIHIGTFKCHKKQAREYPG*CEILDR
Trigger: CCTATCCAATATCTCACACAAACCAGGATACTCTCT...AGCTTGCTTTTTATGGCACTTGAATGTACCAATATGGATGATTTGGTTAATGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp ATTACTTTGGTGCTGCCAATCACTAATTGGGCAATGCCAATAATGAAGCATTCTGTTTATGTACAGATCTaGAGTAAATCTGTGTTCCAG +
Preference number: 5 (lower is better)
Translates to: ITLVLPITNWAMPIMKHSVYVQI*SKSVFQ
Trigger: CTGGAACACAGATTTACTCAAGATCTGTACATAAAC...AGAATGCTTCATTATTGGCATTGCCCAATTAGTGATTGGCAGCACCAAAGTAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR CAA 90 bp GGACACATACTTGTCACAAGTGAACTTGAGGTCACAAAGCCATTGATTAAAAACGTTTATGTACAGATCTaGAGTAAATCTGTGTTCCAG +
Preference number: 5 (lower is better)
Translates to: GHILVTSELEVTKPLIKNVYVQI*SKSVFQ
Trigger: CTGGAACACAGATTTACTCAAGATCTGTACATAAAC...GTTTTTAATCAATGGCTTTGTGACCTCAAGTTCACTTGTGACAAGTATGTGTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp TTGGCAGTGTTACCTTTAGGTAATACAAAGCTGGAATGCCCAATATTTTTCCTCACCAAATCATCCATATaGGTACATTCAAGTGCCATA +
Preference number: 5 (lower is better)
Translates to: LAVLPLGNTKLECPIFFLTKSSI*VHSSAI
Trigger: TATGGCACTTGAATGTACCAATATGGATGATTTGGT...GAGGAAAAATATTGGGCATTCCAGCTTTGTATTACCTAAAGGTAACACTGCCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000636666.1
ENST00000644342.1
ENST00000646800.1
CDS-3UTR CAA 90 bp AGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAGTCAAGACAGACAAGAGAACAATATaGGTAGATGTTGAAGGACAA +
Preference number: 5 (lower is better)
Translates to: RSFYSPCNFCTLLSIVKTDKRTI*VDVEGQ
Trigger: TTGTCCTTCAACATCTACCAATATTGTTCTCTTGTC...TGTCTTGACTATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR CAA 90 bp ATCTTAATTCAGAGAAGGGTTTATGTACAGATCTTGAGTAAATCTGTGTTCCAGGAAATGGCCTCTCCTTaGACTCTCAATAAAGATCTC +
Preference number: 5 (lower is better)
Translates to: ILIQRRVYVQILSKSVFQEMASP*TLNKDL
Trigger: GAGATCTTTATTGAGAGTCAAAGGAGAGGCCATTTC...CTGGAACACAGATTTACTCAAGATCTGTACATAAACCCTTCTCTGAATTAAGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636666.1
ENST00000644342.1
ENST00000646800.1
CDS-3UTR CAA 90 bp TTCAACACAAGTACACGAACAAACAGGTCTGAAGTATATCAGGAAAACAAAGTAGAAATGGCCTCTCCTTaGACTCTCAATAAAGATCTC +
Preference number: 5 (lower is better)
Translates to: FNTSTRTNRSEVYQENKVEMASP*TLNKDL
Trigger: GAGATCTTTATTGAGAGTCAAAGGAGAGGCCATTTC...TACTTTGTTTTCCTGATATACTTCAGACCTGTTTGTTCGTGTACTTGTGTTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636666.1
ENST00000644342.1
ENST00000646800.1
CDS-3UTR CAA 90 bp ATCTTAATTCAGAGAAGGGTTTATGTACAGATCTTGAGTAAATCTGTGTTCCAGTCTTTTGAGTCTGCATaGGTCAGCTTCATCCAATAC +
Preference number: 5 (lower is better)
Translates to: ILIQRRVYVQILSKSVFQSFESA*VSFIQY
Trigger: GTATTGGATGAAGCTGACCAATGCAGACTCAAAAGA...CTGGAACACAGATTTACTCAAGATCTGTACATAAACCCTTCTCTGAATTAAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000636666.1
ENST00000644342.1
ENST00000646800.1
CDS-3UTR CAA 90 bp TTCAACACAAGTACACGAACAAACAGGTCTGAAGTATATCAGGAAAACAAAGTATCCCCAATTGTCCAATaGAGAAGTTTTTATTCCCCC +
Preference number: 5 (lower is better)
Translates to: FNTSTRTNRSEVYQENKVSPIVQ*RSFYSP
Trigger: GGGGGAATAAAAACTTCTCAATTGGACAATTGGGGA...TACTTTGTTTTCCTGATATACTTCAGACCTGTTTGTTCGTGTACTTGTGTTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR CAA 90 bp GACATTAACCAAATCATCCATATTGGTACATTCAAGTGCCATAAAAAGCAAGCTTCCCCAATTGTCCAATaGAGAAGTTTTTATTCCCCC +
Preference number: 5 (lower is better)
Translates to: DINQIIHIGTFKCHKKQASPIVQ*RSFYSP
Trigger: GGGGGAATAAAAACTTCTCAATTGGACAATTGGGGA...AGCTTGCTTTTTATGGCACTTGAATGTACCAATATGGATGATTTGGTTAATGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR CAA 90 bp ACTCCTTTGTACCCCACAATACATACTCTACAAAGAGTAACATTTGACAGAAAATCCCCAATTGTCCAATaGAGAAGTTTTTATTCCCCC +
Preference number: 5 (lower is better)
Translates to: TPLYPTIHTLQRVTFDRKSPIVQ*RSFYSP
Trigger: GGGGGAATAAAAACTTCTCAATTGGACAATTGGGGA...TTTTCTGTCAAATGTTACTCTTTGTAGAGTATGTATTGTGGGGTACAAAGGAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR CAA 90 bp AATCTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCTCTTTTACTTCTATTTaGGAGCACTCTTCAAGTCCT +
Preference number: 5 (lower is better)
Translates to: NLESLKSDYGRLASLSFCSFTSI*EHSSSP
Trigger: AGGACTTGAAGAGTGCTCCAAAATAGAAGTAAAAGA...GCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp AATCTTGAAAGTCTGAAGTCTGACTATGGCAGGTTAGCTTCTTTATCATTTTGCATTCTGTTTCTGCTTTaGATTGAGGGCTTTCTTCTT +
Preference number: 5 (lower is better)
Translates to: NLESLKSDYGRLASLSFCILFLL*IEGFLL
Trigger: AAGAAGAAAGCCCTCAATCAAAAGCAGAAACAGAAT...GCAAAATGATAAAGAAGCTAACCTGCCATAGTCAGACTTCAGACTTTCAAGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp ATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCCATAGTCAAATTCTGTTTCTGCTTTaGATTGAGGGCTTTCTTCTT +
Preference number: 5 (lower is better)
Translates to: IEKFLFPLQFLYSAIHSQILFLL*IEGFLL
Trigger: AAGAAGAAAGCCCTCAATCAAAAGCAGAAACAGAAT...TTGACTATGGATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000646800.1
CDS-3UTR CAA 90 bp GGATCAATGAGATCTAGAAGAATCTCTTGGTATAAACTCCCAATAGAAACTGAATCGTTTAAGCAAATCTaGTCCCTTAGCATGTTTCTC +
Preference number: 5 (lower is better)
Translates to: GSMRSRRISWYKLPIETESFKQI*SLSMFL
Trigger: GAGAAACATGCTAAGGGACAAGATTTGCTTAAACGA...TTCAGTTTCTATTGGGAGTTTATACCAAGAGATTCTTCTAGATCTCATTGATCC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343067.9
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp GACATTAACCAAATCATCCATATTGGTACATTCAAGTGCCATAAAAAGCAAGCTTCGTTTAAGCAAATCTaGTCCCTTAGCATGTTTCTC +
Preference number: 5 (lower is better)
Translates to: DINQIIHIGTFKCHKKQASFKQI*SLSMFL
Trigger: GAGAAACATGCTAAGGGACAAGATTTGCTTAAACGA...AGCTTGCTTTTTATGGCACTTGAATGTACCAATATGGATGATTTGGTTAATGTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp ACTCCTTTGTACCCCACAATACATACTCTACAAAGAGTAACATTTGACAGAAAATCGTTTAAGCAAATCTaGTCCCTTAGCATGTTTCTC +
Preference number: 5 (lower is better)
Translates to: TPLYPTIHTLQRVTFDRKSFKQI*SLSMFL
Trigger: GAGAAACATGCTAAGGGACAAGATTTGCTTAAACGA...TTTTCTGTCAAATGTTACTCTTTGTAGAGTATGTATTGTGGGGTACAAAGGAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp GAGACATTAACCAAATCATCCATATTGGTACATTCAAGTGCCATAAAAAGCAAGTCGTTTAAGCAAATCTaGTCCCTTAGCATGTTTCTC +
Preference number: 5 (lower is better)
Translates to: ETLTKSSILVHSSAIKSKSFKQI*SLSMFL
Trigger: GAGAAACATGCTAAGGGACAAGATTTGCTTAAACGA...CTTGCTTTTTATGGCACTTGAATGTACCAATATGGATGATTTGGTTAATGTCTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp TTCAACACAAGTACACGAACAAACAGGTCTGAAGTATATCAGGAAAACAAAGTAGCAAGAAATTTGCTTTaGGGAATGGTGTCTGTAGAT +
Preference number: 5 (lower is better)
Translates to: FNTSTRTNRSEVYQENKVARNLL*GMVSVD
Trigger: ATCTACAGACACCATTCCCAAAAGCAAATTTCTTGC...TACTTTGTTTTCCTGATATACTTCAGACCTGTTTGTTCGTGTACTTGTGTTGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp ACTCCTTTGTACCCCACAATACATACTCTACAAAGAGTAACATTTGACAGAAAAAAAGAGTTAAAGCTTTaGGGAAGATTACCAACCTGC +
Preference number: 5 (lower is better)
Translates to: TPLYPTIHTLQRVTFDRKKELKL*GRLPTC
Trigger: GCAGGTTGGTAATCTTCCCAAAAGCTTTAACTCTTT...TTTTCTGTCAAATGTTACTCTTTGTAGAGTATGTATTGTGGGGTACAAAGGAGT
37% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp TTCAACACAAGTACACGAACAAACAGGTCTGAAGTATATCAGGAAAACAAAGTAAAAGAGTTAAAGCTTTaGGGAAGATTACCAACCTGC +
Preference number: 5 (lower is better)
Translates to: FNTSTRTNRSEVYQENKVKELKL*GRLPTC
Trigger: GCAGGTTGGTAATCTTCCCAAAAGCTTTAACTCTTT...TACTTTGTTTTCCTGATATACTTCAGACCTGTTTGTTCGTGTACTTGTGTTGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp AATTGTCCAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCACCAAATCATCCATATaGGTACATTCAAGTGCCATA +
Preference number: 5 (lower is better)
Translates to: NCPIEKFLFPLQFLYSAITKSSI*VHSSAI
Trigger: TATGGCACTTGAATGTACCAATATGGATGATTTGGT...GATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTGGACAATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR CAA 90 bp AATTGTCCAATTGAGAAGTTTTTATTCCCCCTGCAATTTCTGTACTCTGCTATCGACAAGAGAACAATATaGGTAGATGTTGAAGGACAA +
Preference number: 5 (lower is better)
Translates to: NCPIEKFLFPLQFLYSAIDKRTI*VDVEGQ
Trigger: TTGTCCTTCAACATCTACCAATATTGTTCTCTTGTC...GATAGCAGAGTACAGAAATTGCAGGGGGAATAAAAACTTCTCAATTGGACAATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR CAA 90 bp TTCAACACAAGTACACGAACAAACAGGTCTGAAGTATATCAGGAAAACAAAGTATCACTGGCTTTCCCCTaGCTATGTTATTTATTCTTC +
Preference number: 5 (lower is better)
Translates to: FNTSTRTNRSEVYQENKVSLAFP*LCYLFF
Trigger: GAAGAATAAATAACATAGCAAGGGGAAAGCCAGTGA...TACTTTGTTTTCCTGATATACTTCAGACCTGTTTGTTCGTGTACTTGTGTTGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR CAA 90 bp GACATTAACCAAATCATCCATATTGGTACATTCAAGTGCCATAAAAAGCAAGCTTCACTGGCTTTCCCCTaGCTATGTTATTTATTCTTC +
Preference number: 5 (lower is better)
Translates to: DINQIIHIGTFKCHKKQASLAFP*LCYLFF
Trigger: GAAGAATAAATAACATAGCAAGGGGAAAGCCAGTGA...AGCTTGCTTTTTATGGCACTTGAATGTACCAATATGGATGATTTGGTTAATGTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644848.1
ENST00000646800.1
CDS-3UTR CAA 90 bp GGATCAATGAGATCTAGAAGAATCTCTTGGTATAAACTCCCAATAGAAACTGAAATTCTGTTTCTGCTTTaGATTGAGGGCTTTCTTCTT +
Preference number: 5 (lower is better)
Translates to: GSMRSRRISWYKLPIETEILFLL*IEGFLL
Trigger: AAGAAGAAAGCCCTCAATCAAAAGCAGAAACAGAAT...TTCAGTTTCTATTGGGAGTTTATACCAAGAGATTCTTCTAGATCTCATTGATCC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp ATCTTAATTCAGAGAAGGGTTTATGTACAGATCTTGAGTAAATCTGTGTTCCAGATTCTGTTTCTGCTTTaGATTGAGGGCTTTCTTCTT +
Preference number: 5 (lower is better)
Translates to: ILIQRRVYVQILSKSVFQILFLL*IEGFLL
Trigger: AAGAAGAAAGCCCTCAATCAAAAGCAGAAACAGAAT...CTGGAACACAGATTTACTCAAGATCTGTACATAAACCCTTCTCTGAATTAAGAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp TTCAACACAAGTACACGAACAAACAGGTCTGAAGTATATCAGGAAAACAAAGTAATTCTGTTTCTGCTTTaGATTGAGGGCTTTCTTCTT +
Preference number: 5 (lower is better)
Translates to: FNTSTRTNRSEVYQENKVILFLL*IEGFLL
Trigger: AAGAAGAAAGCCCTCAATCAAAAGCAGAAACAGAAT...TACTTTGTTTTCCTGATATACTTCAGACCTGTTTGTTCGTGTACTTGTGTTGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp GGATCAATGAGATCTAGAAGAATCTCTTGGTATAAACTCCCAATAGAAACTGAATACATAGACAACTTTTaGGCATTCTCAAGAAACTCC +
Preference number: 5 (lower is better)
Translates to: GSMRSRRISWYKLPIETEYIDNF*AFSRNS
Trigger: GGAGTTTCTTGAGAATGCCAAAAAGTTGTCTATGTA...TTCAGTTTCTATTGGGAGTTTATACCAAGAGATTCTTCTAGATCTCATTGATCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373798.5
ENST00000373800.7
ENST00000642937.2
ENST00000643155.1
ENST00000647103.1
ENST00000649717.1
CDS-3UTR CAA 90 bp GAGACATTAACCAAATCATCCATATTGGTACATTCAAGTGCCATAAAAAGCAAGTACATAGACAACTTTTaGGCATTCTCAAGAAACTCC +
Preference number: 5 (lower is better)
Translates to: ETLTKSSILVHSSAIKSKYIDNF*AFSRNS
Trigger: GGAGTTTCTTGAGAATGCCAAAAAGTTGTCTATGTA...CTTGCTTTTTATGGCACTTGAATGTACCAATATGGATGATTTGGTTAATGTCTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp ACTCCTTTGTACCCCACAATACATACTCTACAAAGAGTAACATTTGACAGAAAATACATAGACAACTTTTaGGCATTCTCAAGAAACTCC +
Preference number: 5 (lower is better)
Translates to: TPLYPTIHTLQRVTFDRKYIDNF*AFSRNS
Trigger: GGAGTTTCTTGAGAATGCCAAAAAGTTGTCTATGTA...TTTTCTGTCAAATGTTACTCTTTGTAGAGTATGTATTGTGGGGTACAAAGGAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp GACATTAACCAAATCATCCATATTGGTACATTCAAGTGCCATAAAAAGCAAGCTTACATAGACAACTTTTaGGCATTCTCAAGAAACTCC +
Preference number: 5 (lower is better)
Translates to: DINQIIHIGTFKCHKKQAYIDNF*AFSRNS
Trigger: GGAGTTTCTTGAGAATGCCAAAAAGTTGTCTATGTA...AGCTTGCTTTTTATGGCACTTGAATGTACCAATATGGATGATTTGGTTAATGTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp TTCAACACAAGTACACGAACAAACAGGTCTGAAGTATATCAGGAAAACAAAGTATACATAGACAACTTTTaGGCATTCTCAAGAAACTCC +
Preference number: 5 (lower is better)
Translates to: FNTSTRTNRSEVYQENKVYIDNF*AFSRNS
Trigger: GGAGTTTCTTGAGAATGCCAAAAAGTTGTCTATGTA...TACTTTGTTTTCCTGATATACTTCAGACCTGTTTGTTCGTGTACTTGTGTTGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp ATCTTAATTCAGAGAAGGGTTTATGTACAGATCTTGAGTAAATCTGTGTTCCAGGTTTATGTACAGATCTaGAGTAAATCTGTGTTCCAG +
Preference number: 5 (lower is better)
Translates to: ILIQRRVYVQILSKSVFQVYVQI*SKSVFQ
Trigger: CTGGAACACAGATTTACTCAAGATCTGTACATAAAC...CTGGAACACAGATTTACTCAAGATCTGTACATAAACCCTTCTCTGAATTAAGAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp ATCTTAATTCAGAGAAGGGTTTATGTACAGATCTTGAGTAAATCTGTGTTCCAGACCAAATCATCCATATaGGTACATTCAAGTGCCATA +
Preference number: 5 (lower is better)
Translates to: ILIQRRVYVQILSKSVFQTKSSI*VHSSAI
Trigger: TATGGCACTTGAATGTACCAATATGGATGATTTGGT...CTGGAACACAGATTTACTCAAGATCTGTACATAAACCCTTCTCTGAATTAAGAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp GAGACATTAACCAAATCATCCATATTGGTACATTCAAGTGCCATAAAAAGCAAGGACAAGAGAACAATATaGGTAGATGTTGAAGGACAA +
Preference number: 5 (lower is better)
Translates to: ETLTKSSILVHSSAIKSKDKRTI*VDVEGQ
Trigger: TTGTCCTTCAACATCTACCAATATTGTTCTCTTGTC...CTTGCTTTTTATGGCACTTGAATGTACCAATATGGATGATTTGGTTAATGTCTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp ATCTTAATTCAGAGAAGGGTTTATGTACAGATCTTGAGTAAATCTGTGTTCCAGGACAAGAGAACAATATaGGTAGATGTTGAAGGACAA +
Preference number: 5 (lower is better)
Translates to: ILIQRRVYVQILSKSVFQDKRTI*VDVEGQ
Trigger: TTGTCCTTCAACATCTACCAATATTGTTCTCTTGTC...CTGGAACACAGATTTACTCAAGATCTGTACATAAACCCTTCTCTGAATTAAGAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000636666.1
ENST00000643173.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000644848.1
ENST00000646189.1
ENST00000646800.1
ENST00000650265.1
CDS-3UTR CAA 90 bp ATCTTAATTCAGAGAAGGGTTTATGTACAGATCTTGAGTAAATCTGTGTTCCAGATCATTCTTACCCTATaGATAGAAGAAATGGCCTCT +
Preference number: 5 (lower is better)
Translates to: ILIQRRVYVQILSKSVFQIILTL*IEEMAS
Trigger: AGAGGCCATTTCTTCTATCAATAGGGTAAGAATGAT...CTGGAACACAGATTTACTCAAGATCTGTACATAAACCCTTCTCTGAATTAAGAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000636666.1
ENST00000644342.1
ENST00000646800.1
CDS GCA 72 bp GTGGCTCCGGGGCCGGGCTCCTGCGCCCGCCACTGCTaGAGCCCGACGAACAATGGCAGGAGGAGGCGCCGG +
Preference number: 6 (lower is better)
Translates to: VAPGPGSCARHC*SPTNNGRRRRR
Trigger: CCGGCGCCTCCTCCTGCCATTGTTCGTCGGGCTGCAGCAGTGGCGGGCGCAGGAGCCCGGCCCCGGAGCCAC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000343067.9
ENST00000349460.9
ENST00000373797.2
ENST00000643173.1
ENST00000643604.1
ENST00000644600.1
ENST00000644780.1
ENST00000645184.1
ENST00000648181.1
ENST00000648891.1
ENST00000649674.1
ENST00000650265.1
CDS GCA 72 bp GCGGTGGCTCCGGGGCCGGGCTCCTGCGCCCGCCACTaGTGCAGCCCGACGAACAATGGCAGGAGGAGGCGC +
Preference number: 6 (lower is better)
Translates to: AVAPGPGSCARH*CSPTNNGRRRR
Trigger: GCGCCTCCTCCTGCCATTGTTCGTCGGGCTGCAGCAGTGGCGGGCGCAGGAGCCCGGCCCCGGAGCCACCGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000343067.9
ENST00000349460.9
ENST00000373797.2
ENST00000643173.1
ENST00000643604.1
ENST00000644600.1
ENST00000644780.1
ENST00000645184.1
ENST00000648891.1
ENST00000649674.1
ENST00000650265.1
CDS GCA 72 bp CCGGTGGCTCCGGGGCCGGGCTCCTGCGCCCGCCACTaGTGCAGCCCGACGAACAATGGCAGGAGGAGGCGC +
Preference number: 6 (lower is better)
Translates to: PVAPGPGSCARH*CSPTNNGRRRR
Trigger: GCGCCTCCTCCTGCCATTGTTCGTCGGGCTGCAGCAGTGGCGGGCGCAGGAGCCCGGCCCCGGAGCCACCGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648181.1
CDS CCA 72 bp CTCCTGCGCCCGCCACTGCTGCAGCCCGACGAACAATaGCAGGAGGAGGCGCCGGCGTCCGAGGCTCGGGCC +
Preference number: 6 (lower is better)
Translates to: LLRPPLLQPDEQ*QEEAPASEARA
Trigger: GGCCCGAGCCTCGGACGCCGGCGCCTCCTCCTGCCATTGTTCGTCGGGCTGCAGCAGTGGCGGGCGCAGGAG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000343067.9
ENST00000349460.9
ENST00000373797.2
ENST00000643173.1
ENST00000643604.1
ENST00000644600.1
ENST00000644780.1
ENST00000645184.1
ENST00000648181.1
ENST00000648891.1
ENST00000649674.1
ENST00000650265.1
CDS GCA 72 bp CTGGCTCCGCGCCGCTCTCGCCCTTTAAGAGGTTCCTaGCACTTTGCCCCGCCGGGGCCTCCACCTGCACTG +
Preference number: 6 (lower is better)
Translates to: LAPRRSRPLRGS*HFAPPGPPPAL
Trigger: CAGTGCAGGTGGAGGCCCCGGCGGGGCAAAGTGGCAGGAACCTCTTAAAGGGCGAGAGCGGCGCGGAGCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642937.2
ENST00000647103.1
CDS GCA 72 bp AATGGCAGGTGCAGAAGTGGGCCGAGGACTTCGGTCTaGCGAATCGACAGCTGCTCCATCGAGGCTCCGGGA +
Preference number: 6 (lower is better)
Translates to: NGRCRSGPRTSV*RIDSCSIEAPG
Trigger: TCCCGGAGCCTCGATGGAGCAGCTGTCGATTCGGCAGACCGAAGTCCTCGGCCCACTTCTGCACCTGCCATT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000482464.6
ENST00000636666.1
ENST00000644342.1
ENST00000645999.1
ENST00000649674.1
CDS GCA 72 bp AGCTGCTCCATCGAGGCTCCGGGACGCCCGTTTACTTaGTGTACGCTCGAAGTGTGGGGCAGGCCTGTCAAT +
Preference number: 6 (lower is better)
Translates to: SCSIEAPGRPFT*CTLEVWGRPVN
Trigger: ATTGACAGGCCTGCCCCACACTTCGAGCGTACAGCAAGTAAACGGGCGTCCCGGAGCCTCGATGGAGCAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000482464.6
ENST00000636666.1
ENST00000644342.1
ENST00000645999.1
ENST00000649674.1
CDS CCA 72 bp CGTAGCAGGGGCTCAGATCACACCAGACTGAGTGGGTaGGTGCAGGCTTCTAAAGCAGCGGGACCCACTGAG +
Preference number: 6 (lower is better)
Translates to: RSRGSDHTRLSG*VQASKAAGPTE
Trigger: CTCAGTGGGTCCCGCTGCTTTAGAAGCCTGCACCCACCCACTCAGTCTGGTGTGATCTGAGCCCCTGCTACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649674.1
CDS TCA 72 bp ACTGAGCACGTAGCAGGGGCTCAGATCACACCAGACTaGGTGGGTGGGTGCAGGCTTCTAAAGCAGCGGGAC +
Preference number: 6 (lower is better)
Translates to: TEHVAGAQITPD*VGGCRLLKQRD
Trigger: GTCCCGCTGCTTTAGAAGCCTGCACCCACCCACTCAGTCTGGTGTGATCTGAGCCCCTGCTACGTGCTCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649674.1
CDS GCA 72 bp GGAGGGAGAGGTTGTAATGAGCCAAGATTGCGCCACTaGACTTTGGCCTGGGCTACAGAACGAAGGTCCGTC +
Preference number: 6 (lower is better)
Translates to: GGRGCNEPRLRH*TLAWATERRSV
Trigger: GACGGACCTTCGTTCTGTAGCCCAGGCCAAAGTGCAGTGGCGCAATCTTGGCTCATTACAACCTCTCCCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647918.1
CDS GCA 72 bp GGAGGCTTCCATGCTTCTGTGGGCTCTGGCTCAGCTTaGTCAGGTGGCTCGTCTTCCTTTTTCACTTCAGCC +
Preference number: 6 (lower is better)
Translates to: GGFHASVGSGSA*SGGSSSFFTSA
Trigger: GGCTGAAGTGAAAAAGGAAGACGAGCCACCTGAGCAAGCTGAGCCAGAGCCCACAGAAGCATGGAAGCCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649717.1
CDS CAA 72 bp GGGAGGCTTCCATGCTTCTGTGGGCTCTGGCTCAGCTaGCTCAGGTGGCTCGTCTTCCTTTTTCACTTCAGC +
Preference number: 6 (lower is better)
Translates to: GRLPCFCGLWLS*LRWLVFLFHFS
Trigger: GCTGAAGTGAAAAAGGAAGACGAGCCACCTGAGCAAGCTGAGCCAGAGCCCACAGAAGCATGGAAGCCTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649717.1
CDS CAA 90 bp CTTCACCAGGGGAGGCTTCCATGCTTCTGTGGGCTCTGGCTCAGCTaGCTCAGGTGGCTCGTCTTCCTTTTTCACTTCAGCCTTCACTGT +
Preference number: 6 (lower is better)
Translates to: LHQGRLPCFCGLWLS*LRWLVFLFHFSLHC
Trigger: ACAGTGAAGGCTGAAGTGAAAAAGGAAGACGAGCCACCTGAGCAAGCTGAGCCAGAGCCCACAGAAGCATGGAAGCCTCCCCTGGTGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649717.1
CDS GCA 72 bp CATACCTTCCATGCTTCTGTGGGCTCTGGCTCAGCTTaGTCAGGTGGCTCGTCTTCCTTTTTCACTTCAGCC +
Preference number: 6 (lower is better)
Translates to: HTFHASVGSGSA*SGGSSSFFTSA
Trigger: GGCTGAAGTGAAAAAGGAAGACGAGCCACCTGAGCAAGCTGAGCCAGAGCCCACAGAAGCATGGAAGGTATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645999.1
CDS CCA 72 bp GCAAAGCTTTGCAGAGACTCCGACGAGGTGGTCATCTaGCTTTTACTAGGAACTACCGAATGCTTGGGACCC +
Preference number: 6 (lower is better)
Translates to: AKLCRDSDEVVI*LLLGTTECLGP
Trigger: GGGTCCCAAGCATTCGGTAGTTCCTAGTAAAAGCCAGATGACCACCTCGTCGGAGTCTCTGCAAAGCTTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460378.1
ENST00000646871.1
CDS CCA 72 bp TTCCTCCACTCCTATACATCCCCCAGTTGGGCCTCTTaGCATCTCCTTAATATCAAGATAGCCAGCTGCCCC +
Preference number: 6 (lower is better)
Translates to: FLHSYTSPSWAS*HLLNIKIASCP
Trigger: GGGGCAGCTGGCTATCTTGATATTAAGGAGATGCCAAGAGGCCCAACTGGGGGATGTATAGGAGTGGAGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000460378.1
ENST00000646871.1
CDS CAA 72 bp ACATACCTTCCATGCTTCTGTGGGCTCTGGCTCAGCTaGCTCAGGTGGCTCGTCTTCCTTTTTCACTTCAGC +
Preference number: 6 (lower is better)
Translates to: TYLPCFCGLWLS*LRWLVFLFHFS
Trigger: GCTGAAGTGAAAAAGGAAGACGAGCCACCTGAGCAAGCTGAGCCAGAGCCCACAGAAGCATGGAAGGTATGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645999.1
CDS CAA 90 bp GGACTGATGACATACCTTCCATGCTTCTGTGGGCTCTGGCTCAGCTaGCTCAGGTGGCTCGTCTTCCTTTTTCACTTCAGCCTTCACTGT +
Preference number: 6 (lower is better)
Translates to: GLMTYLPCFCGLWLS*LRWLVFLFHFSLHC
Trigger: ACAGTGAAGGCTGAAGTGAAAAAGGAAGACGAGCCACCTGAGCAAGCTGAGCCAGAGCCCACAGAAGCATGGAAGGTATGTCATCAGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645999.1
CDS CAA 90 bp TCCGACGAGGTGGTCATCTGGCTTTTACTAGGAACTACCGAATGCTaGGGACCCTCCCATTCAGAGTCAGGGTTAGTAGATGGCCCCTTT +
Preference number: 6 (lower is better)
Translates to: SDEVVIWLLLGTTEC*GPSHSESGLVDGPF
Trigger: AAAGGGGCCATCTACTAACCCTGACTCTGAATGGGAGGGTCCCAAGCATTCGGTAGTTCCTAGTAAAAGCCAGATGACCACCTCGTCGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646871.1
CDS CAA 90 bp CTAGGGATGGAGCTGAAAATATTTGCTTATGGACTAGGGTCCTTCTaGCAGAGAGGTGGCAGCAAGCTTAGCCTGCCCCTGGGTTCCATA +
Preference number: 6 (lower is better)
Translates to: LGMELKIFAYGLGSF*QRGGSKLSLPLGSI
Trigger: TATGGAACCCAGGGGCAGGCTAAGCTTGCTGCCACCTCTCTGCAAGAAGGACCCTAGTCCATAAGCAAATATTTTCAGCTCCATCCCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462032.1
CDS GCA 72 bp TTTTTCTTCCATGCTTCTGTGGGCTCTGGCTCAGCTTaGTCAGGTGGCTCGTCTTCCTTTTTCACTTCAGCC +
Preference number: 6 (lower is better)
Translates to: FFFHASVGSGSA*SGGSSSFFTSA
Trigger: GGCTGAAGTGAAAAAGGAAGACGAGCCACCTGAGCAAGCTGAGCCAGAGCCCACAGAAGCATGGAAGAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000373800.7
CDS CCA 72 bp ACTGGCCTGTTCCTCCACTCCTATACATCCCCCAGTTaGGCCTCTTGGCATCTCCTTAATATCAAGATAGCC +
Preference number: 6 (lower is better)
Translates to: TGLFLHSYTSPS*ASWHLLNIKIA
Trigger: GGCTATCTTGATATTAAGGAGATGCCAAGAGGCCCAACTGGGGGATGTATAGGAGTGGAGGAACAGGCCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000460378.1
ENST00000646871.1
CDS CAA 72 bp CTTTTTCTTCCATGCTTCTGTGGGCTCTGGCTCAGCTaGCTCAGGTGGCTCGTCTTCCTTTTTCACTTCAGC +
Preference number: 6 (lower is better)
Translates to: LFLPCFCGLWLS*LRWLVFLFHFS
Trigger: GCTGAAGTGAAAAAGGAAGACGAGCCACCTGAGCAAGCTGAGCCAGAGCCCACAGAAGCATGGAAGAAAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000373800.7
CDS CAA 72 bp GAGCTGAAAATATTTGCTTATGGACTAGGGTCCTTCTaGCAGAGAGGTGGCAGCAAGCTTAGCCTGCCCCTG +
Preference number: 6 (lower is better)
Translates to: ELKIFAYGLGSF*QRGGSKLSLPL
Trigger: CAGGGGCAGGCTAAGCTTGCTGCCACCTCTCTGCAAGAAGGACCCTAGTCCATAAGCAAATATTTTCAGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462032.1
CDS CAA 72 bp GTAGGGCAGAAAACAAGTTTCGAGTCTGCTGGTGTCTaGTCCACCATACTATGCTCCCGCTCGTGTCTTCTC +
Preference number: 6 (lower is better)
Translates to: VGQKTSFESAGV*STILCSRSCLL
Trigger: GAGAAGACACGAGCGGGAGCATAGTATGGTGGACAAGACACCAGCAGACTCGAAACTTGTTTTCTGCCCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649674.1
CDS CAA 72 bp GGCCAACAGGCTGCAAGATATTTAGGCTTTGCAGCCTaGTTTCTGGGACCCTGTGTCCACTATTCTCAGCTG +
Preference number: 6 (lower is better)
Translates to: GQQAARYLGFAA*FLGPCVHYSQL
Trigger: CAGCTGAGAATAGTGGACACAGGGTCCCAGAAACAAGGCTGCAAAGCCTAAATATCTTGCAGCCTGTTGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649674.1
CDS CAA 90 bp GTTAGAGATGTAGGGCAGAAAACAAGTTTCGAGTCTGCTGGTGTCTaGTCCACCATACTATGCTCCCGCTCGTGTCTTCTCGGCTGTTAC +
Preference number: 6 (lower is better)
Translates to: VRDVGQKTSFESAGV*STILCSRSCLLGCY
Trigger: GTAACAGCCGAGAAGACACGAGCGGGAGCATAGTATGGTGGACAAGACACCAGCAGACTCGAAACTTGTTTTCTGCCCTACATCTCTAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649674.1
CDS TCA 72 bp TGCCTTCTTCCTCGGACACCTGAGATTTGGGCCTTTTaGGAAACGAGGAGAATAGTCGTGAAAGTCCTCTGC +
Preference number: 6 (lower is better)
Translates to: CLLPRTPEIWAF*ETRRIVVKVLC
Trigger: GCAGAGGACTTTCACGACTATTCTCCTCGTTTCTCAAAAGGCCCAAATCTCAGGTGTCCGAGGAAGAAGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 29 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373797.2
ENST00000373798.5
ENST00000373800.7
ENST00000482464.6
ENST00000642643.1
ENST00000642937.2
ENST00000643155.1
ENST00000643173.1
ENST00000643302.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000645111.1
ENST00000645184.1
ENST00000645999.1
ENST00000646189.1
ENST00000646260.1
ENST00000646800.1
ENST00000647103.1
ENST00000647918.1
ENST00000648181.1
ENST00000648891.1
ENST00000649674.1
ENST00000649717.1
ENST00000650265.1
CDS TCA 72 bp GGGGAAGGCAGCAGGGCCTTTCCATCCAGGACTCTTTaGATAATGTGGCTTACTAGGGATGGAGCTGAAAAT +
Preference number: 6 (lower is better)
Translates to: GEGSRAFPSRTL*IMWLTRDGAEN
Trigger: ATTTTCAGCTCCATCCCTAGTAAGCCACATTATTCAAAGAGTCCTGGATGGAAAGGCCCTGCTGCCTTCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000462032.1
CDS GCA 72 bp GAGGTGGTCATCTGGCTTTTACTAGGAACTACCGAATaGTTGGGACCCTCCCATTCAGAGTCAGGGTTAGTA +
Preference number: 6 (lower is better)
Translates to: EVVIWLLLGTTE*LGPSHSESGLV
Trigger: TACTAACCCTGACTCTGAATGGGAGGGTCCCAAGCATTCGGTAGTTCCTAGTAAAAGCCAGATGACCACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646871.1
CDS CCA 72 bp CATGCACTCTCAGTAACTAGAAAACCTGAGGGACACTaGAGCATCTCTCTGAGCTACCAAGTGTGTTTGGCC +
Preference number: 6 (lower is better)
Translates to: HALSVTRKPEGH*SISLSYQVCLA
Trigger: GGCCAAACACACTTGGTAGCTCAGAGAGATGCTCCAGTGTCCCTCAGGTTTTCTAGTTACTGAGAGTGCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649674.1
CDS CAA 72 bp GGACACTGGAGCATCTCTCTGAGCTACCAAGTGTGTTaGGCCCTTATGACCCTGGAAGAAACCTGTGATCAT +
Preference number: 6 (lower is better)
Translates to: GHWSISLSYQVC*ALMTLEETCDH
Trigger: ATGATCACAGGTTTCTTCCAGGGTCATAAGGGCCAAACACACTTGGTAGCTCAGAGAGATGCTCCAGTGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649674.1
CDS CAA 90 bp TCTTTCTCTCTTTTTCTTCCATGCTTCTGTGGGCTCTGGCTCAGCTaGCTCAGGTGGCTCGTCTTCCTTTTTCACTTCAGCCTTCACTGT +
Preference number: 6 (lower is better)
Translates to: SFSLFLPCFCGLWLS*LRWLVFLFHFSLHC
Trigger: ACAGTGAAGGCTGAAGTGAAAAAGGAAGACGAGCCACCTGAGCAAGCTGAGCCAGAGCCCACAGAAGCATGGAAGAAAAAGAGAGAAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000373800.7
CDS GCA 72 bp TGTCTCACTCCAAACCTCAAACACCTTTCACCGCATTaGTTTTGCTGTCTAGTGCAGACTGAGCACGTAGCA +
Preference number: 6 (lower is better)
Translates to: CLTPNLKHLSPH*FCCLVQTEHVA
Trigger: TGCTACGTGCTCAGTCTGCACTAGACAGCAAAAGCAATGCGGTGAAAGGTGTTTGAGGTTTGGAGTGAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649674.1
CDS CAA 72 bp GTGGTCATCTGGCTTTTACTAGGAACTACCGAATGCTaGGGACCCTCCCATTCAGAGTCAGGGTTAGTAGAT +
Preference number: 6 (lower is better)
Translates to: VVIWLLLGTTEC*GPSHSESGLVD
Trigger: ATCTACTAACCCTGACTCTGAATGGGAGGGTCCCAAGCATTCGGTAGTTCCTAGTAAAAGCCAGATGACCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646871.1
CDS CAA 90 bp TTTGCAGTGCAAATGACCACAGAACCAGCAGGAATCGAGGTTATCTaGCTAAGCACAGAAGAAGATACCCAGCAGAAGAGTCCAGCTCCT +
Preference number: 6 (lower is better)
Translates to: FAVQMTTEPAGIEVI*LSTEEDTQQKSPAP
Trigger: AGGAGCTGGACTCTTCTGCTGGGTATCTTCTTCTGTGCTTAGCAAGATAACCTCGATTCCTGCTGGTTCTGTGGTCATTTGCACTGCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000649992.1
ENST00000650132.1
CDS CAA 90 bp CGGCTGTTACAGCTCTCTAAGGGTAGGGGCATGCTTCCCTTTGTTTaGATGTTGTCTAGCATGGGTTCAGGTACCTTTACCTTCGGAATA +
Preference number: 6 (lower is better)
Translates to: RLLQLSKGRGMLPFV*MLSSMGSGTFTFGI
Trigger: TATTCCGAAGGTAAAGGTACCTGAACCCATGCTAGACAACATCAAAACAAAGGGAAGCATGCCCCTACCCTTAGAGAGCTGTAACAGCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649674.1
CDS CAA 90 bp ACAGAATTATTGCTCCAGCAACCCAGTCAACGATTCCAGAAGCATTaGCATGCAATCTCTTCCACCCCCTCTTCTCTGCAGCTTTACTGT +
Preference number: 6 (lower is better)
Translates to: TELLLQQPSQRFQKH*HAISSTPSSLQLYC
Trigger: ACAGTAAAGCTGCAGAGAAGAGGGGGTGGAAGAGATTGCATGCAAATGCTTCTGGAATCGTTGACTGGGTTGCTGGAGCAATAATTCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649674.1
CDS TCA 72 bp AGCTCTCTAAGGGTAGGGGCATGCTTCCCTTTGTTTTaGTGTTGTCTAGCATGGGTTCAGGTACCTTTACCT +
Preference number: 6 (lower is better)
Translates to: SSLRVGACFPLF*CCLAWVQVPLP
Trigger: AGGTAAAGGTACCTGAACCCATGCTAGACAACATCAAAACAAAGGGAAGCATGCCCCTACCCTTAGAGAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649674.1
CDS TCA 72 bp CCCCTATGGAAAAGGACTCAGCTAGAAATGACCAGCTaGCTACTCACCTGGCTCTTAAGAACCATCTCTAGA +
Preference number: 6 (lower is better)
Translates to: PLWKRTQLEMTS*LLTWLLRTISR
Trigger: TCTAGAGATGGTTCTTAAGAGCCAGGTGAGTAGTCAGCTGGTCATTTCTAGCTGAGTCCTTTTCCATAGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649674.1
CDS CCA 72 bp TGGCTTACTAGGGATGGAGCTGAAAATATTTGCTTATaGACTAGGGTCCTTCTTGCAGAGAGGTGGCAGCAA +
Preference number: 6 (lower is better)
Translates to: WLTRDGAENICL*TRVLLAERWQQ
Trigger: TTGCTGCCACCTCTCTGCAAGAAGGACCCTAGTCCATAAGCAAATATTTTCAGCTCCATCCCTAGTAAGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462032.1
CDS CAA 72 bp CTTCTGTTCACACCAATTATCTCCTTCAGCTGCTGTTaGACAAGATTCCTCCTGCTGAGGTTCTTGTTGGCC +
Preference number: 6 (lower is better)
Translates to: LLFTPIISFSCC*TRFLLLRFLLA
Trigger: GGCCAACAAGAACCTCAGCAGGAGGAATCTTGTCAAACAGCAGCTGAAGGAGATAATTGGTGTGAACAGAAG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 28 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373797.2
ENST00000373798.5
ENST00000373800.7
ENST00000482464.6
ENST00000642937.2
ENST00000643155.1
ENST00000643173.1
ENST00000643302.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000645111.1
ENST00000645184.1
ENST00000645999.1
ENST00000646189.1
ENST00000646260.1
ENST00000646800.1
ENST00000647103.1
ENST00000647918.1
ENST00000648181.1
ENST00000648891.1
ENST00000649674.1
ENST00000649717.1
ENST00000650265.1
CDS CAA 72 bp AGTCGTGAAAGTCCTCTGCTTTCTGATGTCCGCTCCTaGTTCTTGGTCAAGTCTTCATGTGTAGGAGTGTCT +
Preference number: 6 (lower is better)
Translates to: SRESPLLSDVRS*FLVKSSCVGVS
Trigger: AGACACTCCTACACATGAAGACTTGACCAAGAACAAGGAGCGGACATCAGAAAGCAGAGGACTTTCACGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 29 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373797.2
ENST00000373798.5
ENST00000373800.7
ENST00000482464.6
ENST00000642643.1
ENST00000642937.2
ENST00000643155.1
ENST00000643173.1
ENST00000643302.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000645111.1
ENST00000645184.1
ENST00000645999.1
ENST00000646189.1
ENST00000646260.1
ENST00000646800.1
ENST00000647103.1
ENST00000647918.1
ENST00000648181.1
ENST00000648891.1
ENST00000649674.1
ENST00000649717.1
ENST00000650265.1
CDS CAA 90 bp GAGGAGAATAGTCGTGAAAGTCCTCTGCTTTCTGATGTCCGCTCCTaGTTCTTGGTCAAGTCTTCATGTGTAGGAGTGTCTCCATTAGAA +
Preference number: 6 (lower is better)
Translates to: EENSRESPLLSDVRS*FLVKSSCVGVSPLE
Trigger: TTCTAATGGAGACACTCCTACACATGAAGACTTGACCAAGAACAAGGAGCGGACATCAGAAAGCAGAGGACTTTCACGACTATTCTCCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 28 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373797.2
ENST00000373798.5
ENST00000373800.7
ENST00000482464.6
ENST00000642937.2
ENST00000643155.1
ENST00000643173.1
ENST00000643302.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000645111.1
ENST00000645184.1
ENST00000645999.1
ENST00000646189.1
ENST00000646260.1
ENST00000646800.1
ENST00000647103.1
ENST00000647918.1
ENST00000648181.1
ENST00000648891.1
ENST00000649674.1
ENST00000649717.1
ENST00000650265.1
CDS TCA 72 bp TCTGACTCTACTTCTTTGCCTTCTTCCTCGGACACCTaGGATTTGGGCCTTTTGAGAAACGAGGAGAATAGT +
Preference number: 6 (lower is better)
Translates to: SDSTSLPSSSDT*DLGLLRNEENS
Trigger: ACTATTCTCCTCGTTTCTCAAAAGGCCCAAATCTCAGGTGTCCGAGGAAGAAGGCAAAGAAGTAGAGTCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 29 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373797.2
ENST00000373798.5
ENST00000373800.7
ENST00000482464.6
ENST00000642643.1
ENST00000642937.2
ENST00000643155.1
ENST00000643173.1
ENST00000643302.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000645111.1
ENST00000645184.1
ENST00000645999.1
ENST00000646189.1
ENST00000646260.1
ENST00000646800.1
ENST00000647103.1
ENST00000647918.1
ENST00000648181.1
ENST00000648891.1
ENST00000649674.1
ENST00000649717.1
ENST00000650265.1
CDS TCA 72 bp TCAGCCACATTTCCTCCACTAAGTACGAATGGTACATaGAACAGCAGTGGCAATGGAATGCATTACCCTCGA +
Preference number: 6 (lower is better)
Translates to: SATFPPLSTNGT*NSSGNGMHYPR
Trigger: TCGAGGGTAATGCATTCCATTGCCACTGCTGTTTCATGTACCATTCGTACTTAGTGGAGGAAATGTGGCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460378.1
CDS TCA 72 bp GATGGTGACAGTTTGTGTCTTCACCAGGGGAGGCTGTaGAGCAGTAAGGAAAGAGTTACTAGAGTATTTCTG +
Preference number: 6 (lower is better)
Translates to: DGDSLCLHQGRL*SSKERVTRVFL
Trigger: CAGAAATACTCTAGTAACTCTTTCCTTACTGCTTCACAGCCTCCCCTGGTGAAGACACAAACTGTCACCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460378.1
ENST00000462032.1
CDS CAA 72 bp GAAAGTCCTCTGCTTTCTGATGTCCGCTCCTTGTTCTaGGTCAAGTCTTCATGTGTAGGAGTGTCTCCATTA +
Preference number: 6 (lower is better)
Translates to: ESPLLSDVRSLF*VKSSCVGVSPL
Trigger: TAATGGAGACACTCCTACACATGAAGACTTGACCAAGAACAAGGAGCGGACATCAGAAAGCAGAGGACTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 28 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373797.2
ENST00000373798.5
ENST00000373800.7
ENST00000482464.6
ENST00000642937.2
ENST00000643155.1
ENST00000643173.1
ENST00000643302.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000645111.1
ENST00000645184.1
ENST00000645999.1
ENST00000646189.1
ENST00000646260.1
ENST00000646800.1
ENST00000647103.1
ENST00000647918.1
ENST00000648181.1
ENST00000648891.1
ENST00000649674.1
ENST00000649717.1
ENST00000650265.1
CDS CAA 90 bp AATAGTCGTGAAAGTCCTCTGCTTTCTGATGTCCGCTCCTTGTTCTaGGTCAAGTCTTCATGTGTAGGAGTGTCTCCATTAGAAGCTTTC +
Preference number: 6 (lower is better)
Translates to: NSRESPLLSDVRSLF*VKSSCVGVSPLEAF
Trigger: GAAAGCTTCTAATGGAGACACTCCTACACATGAAGACTTGACCAAGAACAAGGAGCGGACATCAGAAAGCAGAGGACTTTCACGACTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 28 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373797.2
ENST00000373798.5
ENST00000373800.7
ENST00000482464.6
ENST00000642937.2
ENST00000643155.1
ENST00000643173.1
ENST00000643302.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000645111.1
ENST00000645184.1
ENST00000645999.1
ENST00000646189.1
ENST00000646260.1
ENST00000646800.1
ENST00000647103.1
ENST00000647918.1
ENST00000648181.1
ENST00000648891.1
ENST00000649674.1
ENST00000649717.1
ENST00000650265.1
CDS TCA 72 bp TGCTTAATGAATGAAGATCCAAAGATGGGTCTGTTTTaGGTTCCGGTTCAGGAGCTGCAATTGGGGCCTTTA +
Preference number: 6 (lower is better)
Translates to: CLMNEDPKMGLF*VPVQELQLGPL
Trigger: TAAAGGCCCCAATTGCAGCTCCTGAACCGGAACTCAAAACAGACCCATCTTTGGATCTTCATTCATTAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 29 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373797.2
ENST00000373798.5
ENST00000373800.7
ENST00000482464.6
ENST00000642643.1
ENST00000642937.2
ENST00000643155.1
ENST00000643173.1
ENST00000643302.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000645111.1
ENST00000645184.1
ENST00000645999.1
ENST00000646189.1
ENST00000646260.1
ENST00000646800.1
ENST00000647103.1
ENST00000647918.1
ENST00000648181.1
ENST00000648891.1
ENST00000649674.1
ENST00000649717.1
ENST00000650265.1
CDS TCA 72 bp ACCTTTACCTTCGGAATAACAATAGCTCCATTTAACTaGGCTCACCATGTGCCACCAGCTGTTCATCCAGTA +
Preference number: 6 (lower is better)
Translates to: TFTFGITIAPFN*AHHVPPAVHPV
Trigger: TACTGGATGAACAGCTGGTGGCACATGGTGAGCTCAGTTAAATGGAGCTATTGTTATTCCGAAGGTAAAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649674.1
CDS GCA 72 bp TTTCAGCTTCTGTTCACACCAATTATCTCCTTCAGCTaGTGTTTGACAAGATTCCTCCTGCTGAGGTTCTTG +
Preference number: 6 (lower is better)
Translates to: FQLLFTPIISFS*CLTRFLLLRFL
Trigger: CAAGAACCTCAGCAGGAGGAATCTTGTCAAACAGCAGCTGAAGGAGATAATTGGTGTGAACAGAAGCTGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 28 transcripts:
ENST00000343067.9
ENST00000347529.7
ENST00000349460.9
ENST00000373797.2
ENST00000373798.5
ENST00000373800.7
ENST00000482464.6
ENST00000642937.2
ENST00000643155.1
ENST00000643173.1
ENST00000643302.1
ENST00000643604.1
ENST00000644342.1
ENST00000644600.1
ENST00000644780.1
ENST00000645111.1
ENST00000645184.1
ENST00000645999.1
ENST00000646189.1
ENST00000646260.1
ENST00000646800.1
ENST00000647103.1
ENST00000647918.1
ENST00000648181.1
ENST00000648891.1
ENST00000649674.1
ENST00000649717.1
ENST00000650265.1
CDS GCA 72 bp ATAATGTGGCTTACTAGGGATGGAGCTGAAAATATTTaGTTATGGACTAGGGTCCTTCTTGCAGAGAGGTGG +
Preference number: 6 (lower is better)
Translates to: IMWLTRDGAENI*LWTRVLLAERW
Trigger: CCACCTCTCTGCAAGAAGGACCCTAGTCCATAAGCAAATATTTTCAGCTCCATCCCTAGTAAGCCACATTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462032.1
CDS CAA 90 bp TTACAGCTCTCTAAGGGTAGGGGCATGCTTCCCTTTGTTTTGATGTaGTCTAGCATGGGTTCAGGTACCTTTACCTTCGGAATAACAATA +
Preference number: 6 (lower is better)
Translates to: LQLSKGRGMLPFVLM*SSMGSGTFTFGITI
Trigger: TATTGTTATTCCGAAGGTAAAGGTACCTGAACCCATGCTAGACAACATCAAAACAAAGGGAAGCATGCCCCTACCCTTAGAGAGCTGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000649674.1
CDS TCA 72 bp GCATCATTGAATAAATTACTACCTGGAAACTTCGAATaGGGGTGGGGAACTGGTTACCCACATGAAAGTCAA +
Preference number: 6 (lower is better)
Translates to: ASLNKLLPGNFE*GWGTGYPHESQ
Trigger: TTGACTTTCATGTGGGTAACCAGTTCCCCACCCTCATTCGAAGTTTCCAGGTAGTAATTTATTCAATGATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460378.1
CDS TCA 72 bp CCATCTGCTCACCTTCCCCAGGAGTATAAATCACACTaGAACTACCATTTGATTGTAATAAGGTTAAGTGGC +
Preference number: 6 (lower is better)
Translates to: PSAHLPQEYKSH*NYHLIVIRLSG
Trigger: GCCACTTAACCTTATTACAATCAAATGGTAGTTTCAGTGTGATTTATACTCCTGGGGAAGGTGAGCAGATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460378.1
CDS CCA 72 bp TCCTCCACTAAGTACGAATGGTACATGAAACAGCAGTaGCAATGGAATGCATTACCCTCGAATTCATTAACT +
Preference number: 6 (lower is better)
Translates to: SSTKYEWYMKQQ*QWNALPSNSLT
Trigger: AGTTAATGAATTCGAGGGTAATGCATTCCATTGCCACTGCTGTTTCATGTACCATTCGTACTTAGTGGAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460378.1
CDS TCA 72 bp TTAGCATGTTTCTGTGTTTCTGCACTGCTTAATGAATaGAGATCCAAAGATGGGTCTGTTTTGAGTTCCGGT +
Preference number: 6 (lower is better)
Translates to: LACFCVSALLNE*RSKDGSVLSSG
Trigger: ACCGGAACTCAAAACAGACCCATCTTTGGATCTTCATTCATTAAGCAGTGCAGAAACACAGAAACATGCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644780.1
CDS GCA 72 bp GATGGTAAAACTAGAGCTCAGGTTGGTAATATAAGTTaGTCAAGGACATATAACCAATTAGGTCGCAGAGTC +
Preference number: 6 (lower is better)
Translates to: DGKTRAQVGNIS*SRTYNQLGRRV
Trigger: GACTCTGCGACCTAATTGGTTATATGTCCTTGAGCAACTTATATTACCAACCTGAGCTCTAGTTTTACCATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649674.1
CDS GCA 72 bp GTACGAATGGTACATGAAACAGCAGTGGCAATGGAATaGATTACCCTCGAATTCATTAACTTCTTTCAAATC +
Preference number: 6 (lower is better)
Translates to: VRMVHETAVAME*ITLEFINFFQI
Trigger: GATTTGAAAGAAGTTAATGAATTCGAGGGTAATGCATTCCATTGCCACTGCTGTTTCATGTACCATTCGTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460378.1
CDS CAA 90 bp ATAAAAGGTCAGTCTAGTCACTGTCTAGGAAATCTGCTAATTAAATaGGTGATTTTTCAACACAGTGCAGTGACTGTGGGTGCAATTAAC +
Preference number: 6 (lower is better)
Translates to: IKGQSSHCLGNLLIK*VIFQHSAVTVGAIN
Trigger: GTTAATTGCACCCACAGTCACTGCACTGTGTTGAAAAATCACCAATTTAATTAGCAGATTTCCTAGACAGTGACTAGACTGACCTTTTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645999.1