RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EP400 (Homo sapiens)

Ensembl gene IDs: ENSG00000183495

Ensembl transcript IDs: ENST00000330386.7, ENST00000332482.8, ENST00000333577.8, ENST00000389561.7, ENST00000611118.1, ENST00000611739.4, ENST00000611841.1, ENST00000616136.1

Found 1075 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCACACAGCGGCCCTCCCTCCGGCAAGCTGCGCTCTCACGGCACGTaGCAAGCCAGGGAGAACGGGTTGGTTAGAACAAACAGATTCCAG +
Preference number: 1 (lower is better)
Translates to: AHSGPPSGKLRSHGT*QARENGLVRTNRFQ
Trigger: CTGGAATCTGTTTGTTCTAACCAACCCGTTCTCCCTGGCTTGGCACGTGCCGTGAGAGCGCAGCTTGCCGGAGGGAGGGCCGCTGTGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
3UTR CCA 90 bp CATCGTACCCTCAGCTGTGACATCTGTACTACCATTGCCTCTGCGTaGTCCTCTGGGCCTCACGCCAGCCATGGCAGAGTGTCCCAAAGG +
Preference number: 1 (lower is better)
Translates to: HRTLSCDICTTIASA*SSGPHASHGRVSQR
Trigger: CCTTTGGGACACTCTGCCATGGCTGGCGTGAGGCCCAGAGGACCACGCAGAGGCAATGGTAGTACAGATGTCACAGCTGAGGGTACGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
3UTR CCA 90 bp CAAAGGGCTGACTGTGGCAGCAAGGGGTGTCTGTCACATTCGTCCTaGCTCACTGAGCCCAGGCCTCATCGTACCCTCAGCTGTGACATC +
Preference number: 1 (lower is better)
Translates to: QRADCGSKGCLSHSS*LTEPRPHRTLSCDI
Trigger: GATGTCACAGCTGAGGGTACGATGAGGCCTGGGCTCAGTGAGCCAGGACGAATGTGACAGACACCCCTTGCTGCCACAGTCAGCCCTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
3UTR CCA 90 bp TCAGTTCTATCACATCTGCGGATGAGGAGGAGTAAAAGTTTCCACTaGGAGCCAGATGTGAGGCGCACACAGCGGCCCTCCCTCCGGCAA +
Preference number: 1 (lower is better)
Translates to: SVLSHLRMRRSKSFH*EPDVRRTQRPSLRQ
Trigger: TTGCCGGAGGGAGGGCCGCTGTGTGCGCCTCACATCTGGCTCCCAGTGGAAACTTTTACTCCTCCTCATCCGCAGATGTGATAGAACTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
3UTR TCA 90 bp ATAGCCAATACTTCCAGAATCACCAGCCCACCTTCGTCAAAGGGCTaGCTGTGGCAGCAAGGGGTGTCTGTCACATTCGTCCTGGCTCAC +
Preference number: 1 (lower is better)
Translates to: IANTSRITSPPSSKG*LWQQGVSVTFVLAH
Trigger: GTGAGCCAGGACGAATGTGACAGACACCCCTTGCTGCCACAGTCAGCCCTTTGACGAAGGTGGGCTGGTGATTCTGGAAGTATTGGCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
3UTR CCA 90 bp GCAAGCTGCGCTCTCACGGCACGTGCCAAGCCAGGGAGAACGGGTTaGTTAGAACAAACAGATTCCAGTCCTCTGCTTTGGTATGTTCAA +
Preference number: 1 (lower is better)
Translates to: ASCALTARAKPGRTG*LEQTDSSPLLWYVQ
Trigger: TTGAACATACCAAAGCAGAGGACTGGAATCTGTTTGTTCTAACCAACCCGTTCTCCCTGGCTTGGCACGTGCCGTGAGAGCGCAGCTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
3UTR TCA 90 bp CCTGGGGGAGGCCACTGTTGGCTGCTCTTTGGAATAACAATGCAATaGCTGATCATTTCCCTTGAACACAGGCCAGGAACGTGCCTTGTG +
Preference number: 1 (lower is better)
Translates to: PGGGHCWLLFGITMQ*LIISLEHRPGTCLV
Trigger: CACAAGGCACGTTCCTGGCCTGTGTTCAAGGGAAATGATCAGTCATTGCATTGTTATTCCAAAGAGCAGCCAACAGTGGCCTCCCCCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
3UTR GCA 90 bp AGACACTGTGGAAGCCCACGCCTTATCTTTAGAAAGTCCATTGTATaGTCCTCACACACGGCAGACGGCTTCTGTGGCGTGCAAAGCACT +
Preference number: 1 (lower is better)
Translates to: RHCGSPRLIFRKSIV*SSHTADGFCGVQST
Trigger: AGTGCTTTGCACGCCACAGAAGCCGTCTGCCGTGTGTGAGGAGCATACAATGGACTTTCTAAAGATAAGGCGTGGGCTTCCACAGTGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
3UTR TCA 90 bp AAGGAACCATATTGCCTTTCTTTGGAATGGAAAACCCATCTCGGATaGTTGACTTTAGACAGGCCTTCCCCTCTGCGAAGACCACGAGGC +
Preference number: 1 (lower is better)
Translates to: KEPYCLSLEWKTHLG*LTLDRPSPLRRPRG
Trigger: GCCTCGTGGTCTTCGCAGAGGGGAAGGCCTGTCTAAAGTCAATCATCCGAGATGGGTTTTCCATTCCAAAGAAAGGCAATATGGTTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
3UTR GCA 90 bp TTATCAAGAGCTCAAGTGAGCTCCCCAGTTGATTTCACTGACTCCTaGTGTATCGCTGTCCACAGAAACCTGTGGGACAGAATACCTTCC +
Preference number: 1 (lower is better)
Translates to: LSRAQVSSPVDFTDS*CIAVHRNLWDRIPS
Trigger: GGAAGGTATTCTGTCCCACAGGTTTCTGTGGACAGCGATACAGCAGGAGTCAGTGAAATCAACTGGGGAGCTCACTTGAGCTCTTGATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
3UTR CCA 90 bp GAGCTGTTTAACACACTATGTCAAATACCAGCTTCCCCCGAAAACTaGAGATGCGTCTTGAGTGCACTGAGTTGGGCATCAGTCCCAGAA +
Preference number: 1 (lower is better)
Translates to: ELFNTLCQIPASPEN*RCVLSALSWASVPE
Trigger: TTCTGGGACTGATGCCCAACTCAGTGCACTCAAGACGCATCTCCAGTTTTCGGGGGAAGCTGGTATTTGACATAGTGTGTTAAACAGCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
3UTR GCA 90 bp TTTAACACACTATGTCAAATACCAGCTTCCCCCGAAAACTGGAGATaGGTCTTGAGTGCACTGAGTTGGGCATCAGTCCCAGAAGTTTCC +
Preference number: 1 (lower is better)
Translates to: FNTLCQIPASPENWR*VLSALSWASVPEVS
Trigger: GGAAACTTCTGGGACTGATGCCCAACTCAGTGCACTCAAGACGCATCTCCAGTTTTCGGGGGAAGCTGGTATTTGACATAGTGTGTTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
3UTR TCA 90 bp TTGGCTGCTCTTTGGAATAACAATGCAATGACTGATCATTTCCCTTaGACACAGGCCAGGAACGTGCCTTGTGTGTTTAGGTGGGTGTCA +
Preference number: 1 (lower is better)
Translates to: LAALWNNNAMTDHFP*TQARNVPCVFRWVS
Trigger: TGACACCCACCTAAACACACAAGGCACGTTCCTGGCCTGTGTTCAAGGGAAATGATCAGTCATTGCATTGTTATTCCAAAGAGCAGCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
3UTR GCA 90 bp TCCTCACACACGGCAGACGGCTTCTGTGGCGTGCAAAGCACTACATaGTCACAAAGAAATTCTAAATGGCTTTCAGAACACAGTACTATG +
Preference number: 1 (lower is better)
Translates to: SSHTADGFCGVQSTT*SQRNSKWLSEHSTM
Trigger: CATAGTACTGTGTTCTGAAAGCCATTTAGAATTTCTTTGTGAGCATGTAGTGCTTTGCACGCCACAGAAGCCGTCTGCCGTGTGTGAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
3UTR GCA 90 bp TCTTATCAGGCACCAAATCTGAACAAGGGCTTGGATCCAACCTTCTaGTTCCCGCCAGGTGCTTTAAAAACAGTCTGGCTAACTGTTTTT +
Preference number: 1 (lower is better)
Translates to: SYQAPNLNKGLDPTF*FPPGALKTVWLTVF
Trigger: AAAAACAGTTAGCCAGACTGTTTTTAAAGCACCTGGCGGGAAGCAGAAGGTTGGATCCAAGCCCTTGTTCAGATTTGGTGCCTGATAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
3UTR CCA 90 bp TTTATAGTCTGTGTTCTCAAAGTTTCCAACTCTTACTTGCCGTATTaGAATGAACCCAGATTCACAAGGGGAAGGCCTAGACAACAGCTT +
Preference number: 1 (lower is better)
Translates to: FIVCVLKVSNSYLPY*NEPRFTRGRPRQQL
Trigger: AAGCTGTTGTCTAGGCCTTCCCCTTGTGAATCTGGGTTCATTCCAATACGGCAAGTAAGAGTTGGAAACTTTGAGAACACAGACTATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
3UTR GCA 90 bp AAATCTGAACAAGGGCTTGGATCCAACCTTCTGCTTCCCGCCAGGTaGTTTAAAAACAGTCTGGCTAACTGTTTTTATCATCAGAATAAA +
Preference number: 1 (lower is better)
Translates to: KSEQGLGSNLLLPAR*FKNSLANCFYHQNK
Trigger: TTTATTCTGATGATAAAAACAGTTAGCCAGACTGTTTTTAAAGCACCTGGCGGGAAGCAGAAGGTTGGATCCAAGCCCTTGTTCAGATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
3UTR GCA 90 bp AAATCAAGCCACAGCACAAAGGATACTATTGGATATGGACCTTTTTaGTTTGGTGAAAACTTCAAAGTAAGGAGACACTGTCAATCAATT +
Preference number: 1 (lower is better)
Translates to: KSSHSTKDTIGYGPF*FGENFKVRRHCQSI
Trigger: AATTGATTGACAGTGTCTCCTTACTTTGAAGTTTTCACCAAAGCAAAAAGGTCCATATCCAATAGTATCCTTTGTGCTGTGGCTTGATTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
3UTR CAA 90 bp AGCCCAGGCCTCATCGTACCCTCAGCTGTGACATCTGTACTACCATaGCCTCTGCGTGGTCCTCTGGGCCTCACGCCAGCCATGGCAGAG +
Preference number: 2 (lower is better)
Translates to: SPGLIVPSAVTSVLP*PLRGPLGLTPAMAE
Trigger: CTCTGCCATGGCTGGCGTGAGGCCCAGAGGACCACGCAGAGGCAATGGTAGTACAGATGTCACAGCTGAGGGTACGATGAGGCCTGGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
3UTR-3UTR CCA 90 bp TGTGACATCTGTACTACCATTGCCTCTGCGTGGTCCTCTGGGCCTCACGCCAGCGGGGACGGGTGCGGGTaGGGACTGAAAGGTGAAATG +
Preference number: 2 (lower is better)
Translates to: CDICTTIASAWSSGPHASGDGCG*GLKGEM
Trigger: CATTTCACCTTTCAGTCCCCACCCGCACCCGTCCCC...GCTGGCGTGAGGCCCAGAGGACCACGCAGAGGCAATGGTAGTACAGATGTCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
3UTR-3UTR TCA 90 bp TCCCAGGGTCGCCAATTAGAGTCTGACAGTGTTCGGGCTGCTGCCTTTATAGTCCCTTCGTCAAAGGGCTaGCTGTGGCAGCAAGGGGTG +
Preference number: 2 (lower is better)
Translates to: SQGRQLESDSVRAAAFIVPSSKG*LWQQGV
Trigger: CACCCCTTGCTGCCACAGTCAGCCCTTTGACGAAGG...GACTATAAAGGCAGCAGCCCGAACACTGTCAGACTCTAATTGGCGACCCTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
3UTR CAA 90 bp GGCAAGCTGCGCTCTCACGGCACGTGCCAAGCCAGGGAGAACGGGTaGGTTAGAACAAACAGATTCCAGTCCTCTGCTTTGGTATGTTCA +
Preference number: 2 (lower is better)
Translates to: GKLRSHGTCQARENG*VRTNRFQSSALVCS
Trigger: TGAACATACCAAAGCAGAGGACTGGAATCTGTTTGTTCTAACCAACCCGTTCTCCCTGGCTTGGCACGTGCCGTGAGAGCGCAGCTTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
3UTR-3UTR CCA 90 bp CTATGTCAAATACCAGCTTCCCCCGAAAACTGGAGATGCGTCTTGAGTGCACTGGGGGACGGGTGCGGGTaGGGACTGAAAGGTGAAATG +
Preference number: 2 (lower is better)
Translates to: LCQIPASPENWRCVLSALGDGCG*GLKGEM
Trigger: CATTTCACCTTTCAGTCCCCACCCGCACCCGTCCCC...CAGTGCACTCAAGACGCATCTCCAGTTTTCGGGGGAAGCTGGTATTTGACATAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
3UTR-3UTR CCA 90 bp CCTCATCGTACCCTCAGCTGTGACATCTGTACTACCATTGCCTCTGCGTGGTCCCTCTGGCAGACACTGTaGAAGCCCACGCCTTATCTT +
Preference number: 2 (lower is better)
Translates to: PHRTLSCDICTTIASAWSLWQTL*KPTPYL
Trigger: AAGATAAGGCGTGGGCTTCCACAGTGTCTGCCAGAG...GGACCACGCAGAGGCAATGGTAGTACAGATGTCACAGCTGAGGGTACGATGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
3UTR-3UTR CCA 90 bp TCCCAGGGTCGCCAATTAGAGTCTGACAGTGTTCGGGCTGCTGCCTTTATAGTCCAAGGAAGAGTTGACTaGGCCCACCGCTATAGCCAA +
Preference number: 2 (lower is better)
Translates to: SQGRQLESDSVRAAAFIVQGRVD*AHRYSQ
Trigger: TTGGCTATAGCGGTGGGCCCAGTCAACTCTTCCTTG...GACTATAAAGGCAGCAGCCCGAACACTGTCAGACTCTAATTGGCGACCCTGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
3UTR-3UTR TCA 90 bp TCCATTGTATGCTCCTCACACACGGCAGACGGCTTCTGTGGCGTGCAAAGCACTGTGGGGACTGAAAGGTaGAATGATTTAGAGGAAGCC +
Preference number: 2 (lower is better)
Translates to: SIVCSSHTADGFCGVQSTVGTER*NDLEEA
Trigger: GGCTTCCTCTAAATCATTTCACCTTTCAGTCCCCAC...AGTGCTTTGCACGCCACAGAAGCCGTCTGCCGTGTGTGAGGAGCATACAATGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
3UTR-3UTR GCA 90 bp CTGATCATTTCCCTTGAACACAGGCCAGGAACGTGCCTTGTGTGTTTAGGTGGGACGGCTTCTGTGGCGTaGAAAGCACTACATGCTCAC +
Preference number: 2 (lower is better)
Translates to: LIISLEHRPGTCLVCLGGTASVA*KALHAH
Trigger: GTGAGCATGTAGTGCTTTGCACGCCACAGAAGCCGT...CCCACCTAAACACACAAGGCACGTTCCTGGCCTGTGTTCAAGGGAAATGATCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
3UTR-3UTR GCA 90 bp CTATGTCAAATACCAGCTTCCCCCGAAAACTGGAGATGCGTCTTGAGTGCACTGCACAGGCCAGGAACGTaGCTTGTGTGTTTAGGTGGG +
Preference number: 2 (lower is better)
Translates to: LCQIPASPENWRCVLSALHRPGT*LVCLGG
Trigger: CCCACCTAAACACACAAGGCACGTTCCTGGCCTGTG...CAGTGCACTCAAGACGCATCTCCAGTTTTCGGGGGAAGCTGGTATTTGACATAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
3UTR-3UTR GCA 90 bp TCCCAGGGTCGCCAATTAGAGTCTGACAGTGTTCGGGCTGCTGCCTTTATAGTCGAGATGCGTCTTGAGTaGACTGAGTTGGGCATCAGT +
Preference number: 2 (lower is better)
Translates to: SQGRQLESDSVRAAAFIVEMRLE*TELGIS
Trigger: ACTGATGCCCAACTCAGTGCACTCAAGACGCATCTC...GACTATAAAGGCAGCAGCCCGAACACTGTCAGACTCTAATTGGCGACCCTGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
3UTR-3UTR TCA 90 bp CCTCATCGTACCCTCAGCTGTGACATCTGTACTACCATTGCCTCTGCGTGGTCCAAAACCCATCTCGGATaGTTGACTTTAGACAGGCCT +
Preference number: 2 (lower is better)
Translates to: PHRTLSCDICTTIASAWSKTHLG*LTLDRP
Trigger: AGGCCTGTCTAAAGTCAATCATCCGAGATGGGTTTT...GGACCACGCAGAGGCAATGGTAGTACAGATGTCACAGCTGAGGGTACGATGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
3UTR-3UTR GCA 90 bp TGGGGGAGGCCACTGTTGGCTGCTCTTTGGAATAACAATGCAATGACTGATCATCACAGGCCAGGAACGTaGCTTGTGTGTTTAGGTGGG +
Preference number: 2 (lower is better)
Translates to: WGRPLLAALWNNNAMTDHHRPGT*LVCLGG
Trigger: CCCACCTAAACACACAAGGCACGTTCCTGGCCTGTG...ATGATCAGTCATTGCATTGTTATTCCAAAGAGCAGCCAACAGTGGCCTCCCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
3UTR-3UTR CCA 90 bp TTTCCAACTCTTACTTGCCGTATTGGAATGAACCCAGATTCACAAGGGGAAGGCCTGTCACATTCGTCCTaGCTCACTGAGCCCAGGCCT +
Preference number: 2 (lower is better)
Translates to: FPTLTCRIGMNPDSQGEGLSHSS*LTEPRP
Trigger: AGGCCTGGGCTCAGTGAGCCAGGACGAATGTGACAG...GCCTTCCCCTTGTGAATCTGGGTTCATTCCAATACGGCAAGTAAGAGTTGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
3UTR-3UTR TCA 90 bp TCTGGCAGACACTGTGGAAGCCCACGCCTTATCTTTAGAAAGTCCATTGTATGCGCTGAATCTCTTGCGTaGCATGGTCCCAAGGTTCAC +
Preference number: 2 (lower is better)
Translates to: SGRHCGSPRLIFRKSIVCAESLA*HGPKVH
Trigger: GTGAACCTTGGGACCATGTCACGCAAGAGATTCAGC...GCATACAATGGACTTTCTAAAGATAAGGCGTGGGCTTCCACAGTGTCTGCCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
3UTR-3UTR GCA 90 bp TTTCCAACTCTTACTTGCCGTATTGGAATGAACCCAGATTCACAAGGGGAAGGCACAGGCCTTCCCCTCTaGGAAGACCACGAGGCATTT +
Preference number: 2 (lower is better)
Translates to: FPTLTCRIGMNPDSQGEGTGLPL*EDHEAF
Trigger: AAATGCCTCGTGGTCTTCGCAGAGGGGAAGGCCTGT...GCCTTCCCCTTGTGAATCTGGGTTCATTCCAATACGGCAAGTAAGAGTTGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
3UTR-3UTR CCA 90 bp GCCAAAATCAAGCCACAGCACAAAGGATACTATTGGATATGGACCTTTTTGCTTACCATTGCCTCTGCGTaGTCCTCTGGGCCTCACGCC +
Preference number: 2 (lower is better)
Translates to: AKIKPQHKGYYWIWTFLLTIASA*SSGPHA
Trigger: GGCGTGAGGCCCAGAGGACCACGCAGAGGCAATGGT...AAGCAAAAAGGTCCATATCCAATAGTATCCTTTGTGCTGTGGCTTGATTTTGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
3UTR-3UTR TCA 90 bp CAAGCCACAGCACAAAGGATACTATTGGATATGGACCTTTTTGCTTTGGTGAAACCTTCGTCAAAGGGCTaGCTGTGGCAGCAAGGGGTG +
Preference number: 2 (lower is better)
Translates to: QATAQRILLDMDLFALVKPSSKG*LWQQGV
Trigger: CACCCCTTGCTGCCACAGTCAGCCCTTTGACGAAGG...TTTCACCAAAGCAAAAAGGTCCATATCCAATAGTATCCTTTGTGCTGTGGCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
3UTR-3UTR CCA 90 bp TATGGACCTTTTTGCTTTGGTGAAAACTTCAAAGTAAGGAGACACTGTCAATCACTCTGCGTGGTCCTCTaGGCCTCACGCCAGCCATGG +
Preference number: 2 (lower is better)
Translates to: YGPFCFGENFKVRRHCQSLCVVL*ASRQPW
Trigger: CCATGGCTGGCGTGAGGCCCAGAGGACCACGCAGAG...TGATTGACAGTGTCTCCTTACTTTGAAGTTTTCACCAAAGCAAAAAGGTCCATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
3UTR-3UTR GCA 90 bp AAAGAACTAAACTCTGGCAGACACTGTGGAAGCCCACGCCTTATCTTTAGAAAGACGGCTTCTGTGGCGTaGAAAGCACTACATGCTCAC +
Preference number: 2 (lower is better)
Translates to: KELNSGRHCGSPRLIFRKTASVA*KALHAH
Trigger: GTGAGCATGTAGTGCTTTGCACGCCACAGAAGCCGT...CTTTCTAAAGATAAGGCGTGGGCTTCCACAGTGTCTGCCAGAGTTTAGTTCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
3UTR-3UTR GCA 90 bp TCTCCACATTTCTTATCAAGAGCTCAAGTGAGCTCCCCAGTTGATTTCACTGACGCACAGGTGGTTCTCTaGTTCACTGGCAGAACCACA +
Preference number: 2 (lower is better)
Translates to: SPHFLSRAQVSSPVDFTDAQVVL*FTGRTT
Trigger: TGTGGTTCTGCCAGTGAAGCAGAGAACCACCTGTGC...GTCAGTGAAATCAACTGGGGAGCTCACTTGAGCTCTTGATAAGAAATGTGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
3UTR-3UTR TCA 90 bp CTGTTTAACACACTATGTCAAATACCAGCTTCCCCCGAAAACTGGAGATGCGTCGTGGGGACTGAAAGGTaGAATGATTTAGAGGAAGCC +
Preference number: 2 (lower is better)
Translates to: LFNTLCQIPASPENWRCVVGTER*NDLEEA
Trigger: GGCTTCCTCTAAATCATTTCACCTTTCAGTCCCCAC...GACGCATCTCCAGTTTTCGGGGGAAGCTGGTATTTGACATAGTGTGTTAAACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
3UTR-3UTR GCA 90 bp AGGTGGTTCTCTGCTTCACTGGCAGAACCACACAAGCTTATCCTAGAGAAAATCAGAAAGTCCATTGTATaGTCCTCACACACGGCAGAC +
Preference number: 2 (lower is better)
Translates to: RWFSASLAEPHKLILEKIRKSIV*SSHTAD
Trigger: GTCTGCCGTGTGTGAGGAGCATACAATGGACTTTCT...GATTTTCTCTAGGATAAGCTTGTGTGGTTCTGCCAGTGAAGCAGAGAACCACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
3UTR-3UTR TCA 90 bp AACACACTATGTCAAATACCAGCTTCCCCCGAAAACTGGAGATGCGTCTTGAGTAAAACCCATCTCGGATaGTTGACTTTAGACAGGCCT +
Preference number: 2 (lower is better)
Translates to: NTLCQIPASPENWRCVLSKTHLG*LTLDRP
Trigger: AGGCCTGTCTAAAGTCAATCATCCGAGATGGGTTTT...ACTCAAGACGCATCTCCAGTTTTCGGGGGAAGCTGGTATTTGACATAGTGTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
3UTR-3UTR GCA 90 bp TCTGGCAGACACTGTGGAAGCCCACGCCTTATCTTTAGAAAGTCCATTGTATGCAAGGACCATTTGTCCTaGAGTGTGGGATGCATTTTA +
Preference number: 2 (lower is better)
Translates to: SGRHCGSPRLIFRKSIVCKDHLS*SVGCIL
Trigger: TAAAATGCATCCCACACTGCAGGACAAATGGTCCTT...GCATACAATGGACTTTCTAAAGATAAGGCGTGGGCTTCCACAGTGTCTGCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
3UTR-3UTR GCA 90 bp TACTTTTCTCCACATTTCTTATCAAGAGCTCAAGTGAGCTCCCCAGTTGATTTCGCACAGGTGGTTCTCTaGTTCACTGGCAGAACCACA +
Preference number: 2 (lower is better)
Translates to: YFSPHFLSRAQVSSPVDFAQVVL*FTGRTT
Trigger: TGTGGTTCTGCCAGTGAAGCAGAGAACCACCTGTGC...GAAATCAACTGGGGAGCTCACTTGAGCTCTTGATAAGAAATGTGGAGAAAAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
3UTR-3UTR GCA 90 bp TCCCAGGGTCGCCAATTAGAGTCTGACAGTGTTCGGGCTGCTGCCTTTATAGTCGGATATGGACCTTTTTaGTTTGGTGAAAACTTCAAA +
Preference number: 2 (lower is better)
Translates to: SQGRQLESDSVRAAAFIVGYGPF*FGENFK
Trigger: TTTGAAGTTTTCACCAAAGCAAAAAGGTCCATATCC...GACTATAAAGGCAGCAGCCCGAACACTGTCAGACTCTAATTGGCGACCCTGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
3UTR-3UTR CCA 90 bp TACTTTTCTCCACATTTCTTATCAAGAGCTCAAGTGAGCTCCCCAGTTGATTTCGGGGGAGGCCACTGTTaGCTGCTCTTTGGAATAACA +
Preference number: 2 (lower is better)
Translates to: YFSPHFLSRAQVSSPVDFGGGHC*LLFGIT
Trigger: TGTTATTCCAAAGAGCAGCCAACAGTGGCCTCCCCC...GAAATCAACTGGGGAGCTCACTTGAGCTCTTGATAAGAAATGTGGAGAAAAGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
3UTR-3UTR CCA 90 bp TCTCCACATTTCTTATCAAGAGCTCAAGTGAGCTCCCCAGTTGATTTCACTGACGTCCACAGAAACCTGTaGGACAGAATACCTTCCTCA +
Preference number: 2 (lower is better)
Translates to: SPHFLSRAQVSSPVDFTDVHRNL*DRIPSS
Trigger: TGAGGAAGGTATTCTGTCCCACAGGTTTCTGTGGAC...GTCAGTGAAATCAACTGGGGAGCTCACTTGAGCTCTTGATAAGAAATGTGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
3UTR-3UTR TCA 90 bp CAAGCCACAGCACAAAGGATACTATTGGATATGGACCTTTTTGCTTTGGTGAAATCGTACCCTCAGCTGTaGCATCTGTACTACCATTGC +
Preference number: 2 (lower is better)
Translates to: QATAQRILLDMDLFALVKSYPQL*HLYYHC
Trigger: GCAATGGTAGTACAGATGTCACAGCTGAGGGTACGA...TTTCACCAAAGCAAAAAGGTCCATATCCAATAGTATCCTTTGTGCTGTGGCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
3UTR-3UTR TCA 90 bp GCCAAAATCAAGCCACAGCACAAAGGATACTATTGGATATGGACCTTTTTGCTTTCGTACCCTCAGCTGTaGCATCTGTACTACCATTGC +
Preference number: 2 (lower is better)
Translates to: AKIKPQHKGYYWIWTFLLSYPQL*HLYYHC
Trigger: GCAATGGTAGTACAGATGTCACAGCTGAGGGTACGA...AAGCAAAAAGGTCCATATCCAATAGTATCCTTTGTGCTGTGGCTTGATTTTGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
3UTR-3UTR CCA 90 bp AAAGAACTAAACTCTGGCAGACACTGTGGAAGCCCACGCCTTATCTTTAGAAAGATCTCTTGCGTGACATaGTCCCAAGGTTCACTAATA +
Preference number: 2 (lower is better)
Translates to: KELNSGRHCGSPRLIFRKISCVT*SQGSLI
Trigger: TATTAGTGAACCTTGGGACCATGTCACGCAAGAGAT...CTTTCTAAAGATAAGGCGTGGGCTTCCACAGTGTCTGCCAGAGTTTAGTTCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
3UTR-3UTR CCA 90 bp TCTCCACATTTCTTATCAAGAGCTCAAGTGAGCTCCCCAGTTGATTTCACTGACATCTCTTGCGTGACATaGTCCCAAGGTTCACTAATA +
Preference number: 2 (lower is better)
Translates to: SPHFLSRAQVSSPVDFTDISCVT*SQGSLI
Trigger: TATTAGTGAACCTTGGGACCATGTCACGCAAGAGAT...GTCAGTGAAATCAACTGGGGAGCTCACTTGAGCTCTTGATAAGAAATGTGGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
3UTR-3UTR TCA 90 bp ATAGTCTGTGTTCTCAAAGTTTCCAACTCTTACTTGCCGTATTGGAATGAACCCTATCAAGAGCTCAAGTaGGCTCCCCAGTTGATTTCA +
Preference number: 2 (lower is better)
Translates to: IVCVLKVSNSYLPYWNEPYQELK*APQLIS
Trigger: TGAAATCAACTGGGGAGCTCACTTGAGCTCTTGATA...GGGTTCATTCCAATACGGCAAGTAAGAGTTGGAAACTTTGAGAACACAGACTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
3UTR-3UTR GCA 90 bp TATGGACCTTTTTGCTTTGGTGAAAACTTCAAAGTAAGGAGACACTGTCAATCAAAGGACCATTTGTCCTaGAGTGTGGGATGCATTTTA +
Preference number: 2 (lower is better)
Translates to: YGPFCFGENFKVRRHCQSKDHLS*SVGCIL
Trigger: TAAAATGCATCCCACACTGCAGGACAAATGGTCCTT...TGATTGACAGTGTCTCCTTACTTTGAAGTTTTCACCAAAGCAAAAAGGTCCATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
3UTR GCA 72 bp GGCCCTCCCTCCGGCAAGCTGCGCTCTCACGGCACGTaGCAAGCCAGGGAGAACGGGTTGGTTAGAACAAAC +
Preference number: 3 (lower is better)
Translates to: GPPSGKLRSHGT*QARENGLVRTN
Trigger: GTTTGTTCTAACCAACCCGTTCTCCCTGGCTTGGCACGTGCCGTGAGAGCGCAGCTTGCCGGAGGGAGGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
3UTR CCA 72 bp GACTGTGGCAGCAAGGGGTGTCTGTCACATTCGTCCTaGCTCACTGAGCCCAGGCCTCATCGTACCCTCAGC +
Preference number: 3 (lower is better)
Translates to: DCGSKGCLSHSS*LTEPRPHRTLS
Trigger: GCTGAGGGTACGATGAGGCCTGGGCTCAGTGAGCCAGGACGAATGTGACAGACACCCCTTGCTGCCACAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
3UTR CCA 72 bp CTCAGCTGTGACATCTGTACTACCATTGCCTCTGCGTaGTCCTCTGGGCCTCACGCCAGCCATGGCAGAGTG +
Preference number: 3 (lower is better)
Translates to: LSCDICTTIASA*SSGPHASHGRV
Trigger: CACTCTGCCATGGCTGGCGTGAGGCCCAGAGGACCACGCAGAGGCAATGGTAGTACAGATGTCACAGCTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
3UTR CCA 72 bp TCACATCTGCGGATGAGGAGGAGTAAAAGTTTCCACTaGGAGCCAGATGTGAGGCGCACACAGCGGCCCTCC +
Preference number: 3 (lower is better)
Translates to: SHLRMRRSKSFH*EPDVRRTQRPS
Trigger: GGAGGGCCGCTGTGTGCGCCTCACATCTGGCTCCCAGTGGAAACTTTTACTCCTCCTCATCCGCAGATGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
3UTR TCA 72 bp ACTTCCAGAATCACCAGCCCACCTTCGTCAAAGGGCTaGCTGTGGCAGCAAGGGGTGTCTGTCACATTCGTC +
Preference number: 3 (lower is better)
Translates to: TSRITSPPSSKG*LWQQGVSVTFV
Trigger: GACGAATGTGACAGACACCCCTTGCTGCCACAGTCAGCCCTTTGACGAAGGTGGGCTGGTGATTCTGGAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
3UTR CCA 72 bp GCTCTCACGGCACGTGCCAAGCCAGGGAGAACGGGTTaGTTAGAACAAACAGATTCCAGTCCTCTGCTTTGG +
Preference number: 3 (lower is better)
Translates to: ALTARAKPGRTG*LEQTDSSPLLW
Trigger: CCAAAGCAGAGGACTGGAATCTGTTTGTTCTAACCAACCCGTTCTCCCTGGCTTGGCACGTGCCGTGAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
3UTR GCA 72 bp GGAAGCCCACGCCTTATCTTTAGAAAGTCCATTGTATaGTCCTCACACACGGCAGACGGCTTCTGTGGCGTG +
Preference number: 3 (lower is better)
Translates to: GSPRLIFRKSIV*SSHTADGFCGV
Trigger: CACGCCACAGAAGCCGTCTGCCGTGTGTGAGGAGCATACAATGGACTTTCTAAAGATAAGGCGTGGGCTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
3UTR-3UTR CAA 90 bp ACGCCTTCCACAACAGCACAGGTGGTTCTCTGCTTCACTGGCAGAACCACACAAACATCTGTACTACCATaGCCTCTGCGTGGTCCTCTG +
Preference number: 3 (lower is better)
Translates to: TPSTTAQVVLCFTGRTTQTSVLP*PLRGPL
Trigger: CAGAGGACCACGCAGAGGCAATGGTAGTACAGATGT...TTGTGTGGTTCTGCCAGTGAAGCAGAGAACCACCTGTGCTGTTGTGGAAGGCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
3UTR-3UTR CAA 90 bp CAGCACAGGTGGTTCTCTGCTTCACTGGCAGAACCACACAAGCTTATCCTAGAGGTCCACAAGGAAGAGTaGACTGGGCCCACCGCTATA +
Preference number: 3 (lower is better)
Translates to: QHRWFSASLAEPHKLILEVHKEE*TGPTAI
Trigger: TATAGCGGTGGGCCCAGTCAACTCTTCCTTGTGGAC...CTCTAGGATAAGCTTGTGTGGTTCTGCCAGTGAAGCAGAGAACCACCTGTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
3UTR TCA 72 bp CAGGGCAACTGTTTCCCAGGGTCGCCAATTAGAGTCTaGCAGTGTTCGGGCTGCTGCCTTTATAGTCTGTGT +
Preference number: 3 (lower is better)
Translates to: QGNCFPGSPIRV*QCSGCCLYSLC
Trigger: ACACAGACTATAAAGGCAGCAGCCCGAACACTGTCAGACTCTAATTGGCGACCCTGGGAAACAGTTGCCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
3UTR GCA 72 bp ACCAGCTTCCCCCGAAAACTGGAGATGCGTCTTGAGTaGACTGAGTTGGGCATCAGTCCCAGAAGTTTCCAT +
Preference number: 3 (lower is better)
Translates to: TSFPRKLEMRLE*TELGISPRSFH
Trigger: ATGGAAACTTCTGGGACTGATGCCCAACTCAGTGCACTCAAGACGCATCTCCAGTTTTCGGGGGAAGCTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
3UTR-3UTR CAA 90 bp CAGCACAGGTGGTTCTCTGCTTCACTGGCAGAACCACACAAGCTTATCCTAGAGCTTGAGTGCACTGAGTaGGGCATCAGTCCCAGAAGT +
Preference number: 3 (lower is better)
Translates to: QHRWFSASLAEPHKLILELECTE*GISPRS
Trigger: ACTTCTGGGACTGATGCCCAACTCAGTGCACTCAAG...CTCTAGGATAAGCTTGTGTGGTTCTGCCAGTGAAGCAGAGAACCACCTGTGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
3UTR-3UTR CAA 90 bp CAGCACAGGTGGTTCTCTGCTTCACTGGCAGAACCACACAAGCTTATCCTAGAGAACTGGAGATGCGTCTaGAGTGCACTGAGTTGGGCA +
Preference number: 3 (lower is better)
Translates to: QHRWFSASLAEPHKLILENWRCV*SALSWA
Trigger: TGCCCAACTCAGTGCACTCAAGACGCATCTCCAGTT...CTCTAGGATAAGCTTGTGTGGTTCTGCCAGTGAAGCAGAGAACCACCTGTGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
3UTR-3UTR CAA 90 bp TTTCCAACTCTTACTTGCCGTATTGGAATGAACCCAGATTCACAAGGGGAAGGCCCAGTGCTGAATCTCTaGCGTGACATGGTCCCAAGG +
Preference number: 3 (lower is better)
Translates to: FPTLTCRIGMNPDSQGEGPVLNL*RDMVPR
Trigger: CCTTGGGACCATGTCACGCAAGAGATTCAGCACTGG...GCCTTCCCCTTGTGAATCTGGGTTCATTCCAATACGGCAAGTAAGAGTTGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
3UTR TCA 72 bp GAAACACACTTGAGAGACAGGAGACCCTCACTGACGTaGGATCGGGGCGGAAACTCCACATTGCAAATATTC +
Preference number: 3 (lower is better)
Translates to: ETHLRDRRPSLT*DRGGNSTLQIF
Trigger: GAATATTTGCAATGTGGAGTTTCCGCCCCGATCTCACGTCAGTGAGGGTCTCCTGTCTCTCAAGTGTGTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
3UTR GCA 72 bp GCACCAAATCTGAACAAGGGCTTGGATCCAACCTTCTaGTTCCCGCCAGGTGCTTTAAAAACAGTCTGGCTA +
Preference number: 3 (lower is better)
Translates to: APNLNKGLDPTF*FPPGALKTVWL
Trigger: TAGCCAGACTGTTTTTAAAGCACCTGGCGGGAAGCAGAAGGTTGGATCCAAGCCCTTGTTCAGATTTGGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
3UTR CCA 72 bp CATTGTATGCTCCTCACACACGGCAGACGGCTTCTGTaGCGTGCAAAGCACTACATGCTCACAAAGAAATTC +
Preference number: 3 (lower is better)
Translates to: HCMLLTHGRRLL*RAKHYMLTKKF
Trigger: GAATTTCTTTGTGAGCATGTAGTGCTTTGCACGCCACAGAAGCCGTCTGCCGTGTGTGAGGAGCATACAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
3UTR-3UTR CAA 90 bp TCTCCACATTTCTTATCAAGAGCTCAAGTGAGCTCCCCAGTTGATTTCACTGACCCAGTGCTGAATCTCTaGCGTGACATGGTCCCAAGG +
Preference number: 3 (lower is better)
Translates to: SPHFLSRAQVSSPVDFTDPVLNL*RDMVPR
Trigger: CCTTGGGACCATGTCACGCAAGAGATTCAGCACTGG...GTCAGTGAAATCAACTGGGGAGCTCACTTGAGCTCTTGATAAGAAATGTGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
3UTR CCA 72 bp AACACACTATGTCAAATACCAGCTTCCCCCGAAAACTaGAGATGCGTCTTGAGTGCACTGAGTTGGGCATCA +
Preference number: 3 (lower is better)
Translates to: NTLCQIPASPEN*RCVLSALSWAS
Trigger: TGATGCCCAACTCAGTGCACTCAAGACGCATCTCCAGTTTTCGGGGGAAGCTGGTATTTGACATAGTGTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
3UTR CCA 72 bp AAATCTGCTGTCGTAAGTCCACAAGGAAGAGTTGACTaGGCCCACCGCTATAGCCAATACTTCCAGAATCAC +
Preference number: 3 (lower is better)
Translates to: KSAVVSPQGRVD*AHRYSQYFQNH
Trigger: GTGATTCTGGAAGTATTGGCTATAGCGGTGGGCCCAGTCAACTCTTCCTTGTGGACTTACGACAGCAGATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
3UTR-3UTR CAA 90 bp TCCCAGGGTCGCCAATTAGAGTCTGACAGTGTTCGGGCTGCTGCCTTTATAGTCAAGGAAGGAACCATATaGCCTTTCTTTGGAATGGAA +
Preference number: 3 (lower is better)
Translates to: SQGRQLESDSVRAAAFIVKEGTI*PFFGME
Trigger: TTCCATTCCAAAGAAAGGCAATATGGTTCCTTCCTT...GACTATAAAGGCAGCAGCCCGAACACTGTCAGACTCTAATTGGCGACCCTGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
3UTR-3UTR CAA 90 bp ACGCCTTCCACAACAGCACAGGTGGTTCTCTGCTTCACTGGCAGAACCACACAAAAGGAAGGAACCATATaGCCTTTCTTTGGAATGGAA +
Preference number: 3 (lower is better)
Translates to: TPSTTAQVVLCFTGRTTQKEGTI*PFFGME
Trigger: TTCCATTCCAAAGAAAGGCAATATGGTTCCTTCCTT...TTGTGTGGTTCTGCCAGTGAAGCAGAGAACCACCTGTGCTGTTGTGGAAGGCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
3UTR-3UTR CAA 90 bp TACTTTTCTCCACATTTCTTATCAAGAGCTCAAGTGAGCTCCCCAGTTGATTTCACATCTGTACTACCATaGCCTCTGCGTGGTCCTCTG +
Preference number: 3 (lower is better)
Translates to: YFSPHFLSRAQVSSPVDFTSVLP*PLRGPL
Trigger: CAGAGGACCACGCAGAGGCAATGGTAGTACAGATGT...GAAATCAACTGGGGAGCTCACTTGAGCTCTTGATAAGAAATGTGGAGAAAAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
3UTR GCA 72 bp CAAGGGCTTGGATCCAACCTTCTGCTTCCCGCCAGGTaGTTTAAAAACAGTCTGGCTAACTGTTTTTATCAT +
Preference number: 3 (lower is better)
Translates to: QGLGSNLLLPAR*FKNSLANCFYH
Trigger: ATGATAAAAACAGTTAGCCAGACTGTTTTTAAAGCACCTGGCGGGAAGCAGAAGGTTGGATCCAAGCCCTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
3UTR CCA 72 bp TGTGTTCTCAAAGTTTCCAACTCTTACTTGCCGTATTaGAATGAACCCAGATTCACAAGGGGAAGGCCTAGA +
Preference number: 3 (lower is better)
Translates to: CVLKVSNSYLPY*NEPRFTRGRPR
Trigger: TCTAGGCCTTCCCCTTGTGAATCTGGGTTCATTCCAATACGGCAAGTAAGAGTTGGAAACTTTGAGAACACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
3UTR-3UTR CAA 90 bp TATGGACCTTTTTGCTTTGGTGAAAACTTCAAAGTAAGGAGACACTGTCAATCAAACTGGAGATGCGTCTaGAGTGCACTGAGTTGGGCA +
Preference number: 3 (lower is better)
Translates to: YGPFCFGENFKVRRHCQSNWRCV*SALSWA
Trigger: TGCCCAACTCAGTGCACTCAAGACGCATCTCCAGTT...TGATTGACAGTGTCTCCTTACTTTGAAGTTTTCACCAAAGCAAAAAGGTCCATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
3UTR TCA 72 bp TTTACTTTTCTCCACATTTCTTATCAAGAGCTCAAGTaGGCTCCCCAGTTGATTTCACTGACTCCTGCTGTA +
Preference number: 3 (lower is better)
Translates to: FTFLHISYQELK*APQLISLTPAV
Trigger: TACAGCAGGAGTCAGTGAAATCAACTGGGGAGCTCACTTGAGCTCTTGATAAGAAATGTGGAGAAAAGTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR GCA 90 bp TGTGACATCTGTACTACCATTGCCTCTGCGTGGTCCTCTGGGCCTCACGCCAGCGGGATCATCTGCACCTaGTGCCCGGCCGCCGTCGCC +
Preference number: 4 (lower is better)
Translates to: CDICTTIASAWSSGPHASGIICT*CPAAVA
Trigger: GGCGACGGCGGCCGGGCAGCAGGTGCAGATGATCCC...GCTGGCGTGAGGCCCAGAGGACCACGCAGAGGCAATGGTAGTACAGATGTCACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR GCA 90 bp TGTGACATCTGTACTACCATTGCCTCTGCGTGGTCCTCTGGGCCTCACGCCAGCTTGTGGGGTCAAGGGTaGAGGGCTGGGACCGCCGGC +
Preference number: 4 (lower is better)
Translates to: CDICTTIASAWSSGPHASLWGQG*RAGTAG
Trigger: GCCGGCGGTCCCAGCCCTGCACCCTTGACCCCACAA...GCTGGCGTGAGGCCCAGAGGACCACGCAGAGGCAATGGTAGTACAGATGTCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CCA 90 bp TCCATTGTATGCTCCTCACACACGGCAGACGGCTTCTGTGGCGTGCAAAGCACTGGCCCTGCTGGCGGCTaGCTGCCCGCTGCCTGTGGT +
Preference number: 4 (lower is better)
Translates to: SIVCSSHTADGFCGVQSTGPAGG*LPAACG
Trigger: ACCACAGGCAGCGGGCAGCCAGCCGCCAGCAGGGCC...AGTGCTTTGCACGCCACAGAAGCCGTCTGCCGTGTGTGAGGAGCATACAATGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR TCA 90 bp TGTGACATCTGTACTACCATTGCCTCTGCGTGGTCCTCTGGGCCTCACGCCAGCGGCAGGGAGGAAAGCTaGGAGGCCTGCACCTGCACC +
Preference number: 4 (lower is better)
Translates to: CDICTTIASAWSSGPHASGREES*EACTCT
Trigger: GGTGCAGGTGCAGGCCTCTCAGCTTTCCTCCCTGCC...GCTGGCGTGAGGCCCAGAGGACCACGCAGAGGCAATGGTAGTACAGATGTCACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR TCA 90 bp TGTGACATCTGTACTACCATTGCCTCTGCGTGGTCCTCTGGGCCTCACGCCAGCGCAGCCCTGCTGCCCTaGCTACTGGCACGGAGGCTT +
Preference number: 4 (lower is better)
Translates to: CDICTTIASAWSSGPHASAALLP*LLARRL
Trigger: AAGCCTCCGTGCCAGTAGTCAGGGCAGCAGGGCTGC...GCTGGCGTGAGGCCCAGAGGACCACGCAGAGGCAATGGTAGTACAGATGTCACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR TCA 90 bp GCTGTCGTAAGTCCACAAGGAAGAGTTGACTGGGCCCACCGCTATAGCCAATACGCGGCTGGCCCGCTGTaGGCTGCCGGAGCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: AVVSPQGRVDWAHRYSQYAAGPL*AAGAGC
Trigger: ACAGCCAGCTCCGGCAGCTCACAGCGGGCCAGCCGC...GTATTGGCTATAGCGGTGGGCCCAGTCAACTCTTCCTTGTGGACTTACGACAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR GCA 90 bp CCTCATCGTACCCTCAGCTGTGACATCTGTACTACCATTGCCTCTGCGTGGTCCGCTCCTCACCCTCGCTaGCAGGGCAGGCCCTGGACC +
Preference number: 4 (lower is better)
Translates to: PHRTLSCDICTTIASAWSAPHPR*QGRPWT
Trigger: GGTCCAGGGCCTGCCCTGGCAGCGAGGGTGAGGAGC...GGACCACGCAGAGGCAATGGTAGTACAGATGTCACAGCTGAGGGTACGATGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR GCA 90 bp TGTGACATCTGTACTACCATTGCCTCTGCGTGGTCCTCTGGGCCTCACGCCAGCTGGGGTGCCTGGGTCTaGATCTGCCCTTGCGCCTGC +
Preference number: 4 (lower is better)
Translates to: CDICTTIASAWSSGPHASWGAWV*ICPCAC
Trigger: GCAGGCGCAAGGGCAGATGCAGACCCAGGCACCCCA...GCTGGCGTGAGGCCCAGAGGACCACGCAGAGGCAATGGTAGTACAGATGTCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR GCA 90 bp TGTGACATCTGTACTACCATTGCCTCTGCGTGGTCCTCTGGGCCTCACGCCAGCTGTGCGGTGATCTTCTaGTGGACGGCTGCCGGGCCC +
Preference number: 4 (lower is better)
Translates to: CDICTTIASAWSSGPHASCAVIF*WTAAGP
Trigger: GGGCCCGGCAGCCGTCCAGCAGAAGATCACCGCACA...GCTGGCGTGAGGCCCAGAGGACCACGCAGAGGCAATGGTAGTACAGATGTCACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR GCA 90 bp CCTCATCGTACCCTCAGCTGTGACATCTGTACTACCATTGCCTCTGCGTGGTCCCCGGCCGCCGTCGCCTaGGTGAGCGCCACAGTCTGT +
Preference number: 4 (lower is better)
Translates to: PHRTLSCDICTTIASAWSPAAVA*VSATVC
Trigger: ACAGACTGTGGCGCTCACGCAGGCGACGGCGGCCGG...GGACCACGCAGAGGCAATGGTAGTACAGATGTCACAGCTGAGGGTACGATGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR GCA 90 bp ACGCCTTCCACAACAGCACAGGTGGTTCTCTGCTTCACTGGCAGAACCACACAAGACAGCTGGTGGCCCTaGTGGCGGCTGGCTGCCCGC +
Preference number: 4 (lower is better)
Translates to: TPSTTAQVVLCFTGRTTQDSWWP*WRLAAR
Trigger: GCGGGCAGCCAGCCGCCAGCAGGGCCACCAGCTGTC...TTGTGTGGTTCTGCCAGTGAAGCAGAGAACCACCTGTGCTGTTGTGGAAGGCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CCA 90 bp CCTCATCGTACCCTCAGCTGTGACATCTGTACTACCATTGCCTCTGCGTGGTCCGAGCTGGCGGGCACCTaGGCTGGGTTGGGAGCGCCT +
Preference number: 4 (lower is better)
Translates to: PHRTLSCDICTTIASAWSELAGT*AGLGAP
Trigger: AGGCGCTCCCAACCCAGCCCAGGTGCCCGCCAGCTC...GGACCACGCAGAGGCAATGGTAGTACAGATGTCACAGCTGAGGGTACGATGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CCA 90 bp CCTCATCGTACCCTCAGCTGTGACATCTGTACTACCATTGCCTCTGCGTGGTCCTGGTTGTGGCAGCGGTaGCGGTGGCTGCTGCGGGGG +
Preference number: 4 (lower is better)
Translates to: PHRTLSCDICTTIASAWSWLWQR*RWLLRG
Trigger: CCCCCGCAGCAGCCACCGCCACCGCTGCCACAACCA...GGACCACGCAGAGGCAATGGTAGTACAGATGTCACAGCTGAGGGTACGATGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CCA 90 bp AACCCATCTCGGATGATTGACTTTAGACAGGCCTTCCCCTCTGCGAAGACCACGAGCTGGTGGCCCTGCTaGCGGCTGGCTGCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: NPSRMIDFRQAFPSAKTTSWWPC*RLAARC
Trigger: GCAGCGGGCAGCCAGCCGCCAGCAGGGCCACCAGCT...CGTGGTCTTCGCAGAGGGGAAGGCCTGTCTAAAGTCAATCATCCGAGATGGGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CCA 90 bp AACCCATCTCGGATGATTGACTTTAGACAGGCCTTCCCCTCTGCGAAGACCACGGGAGCCGACTGCCCGTaGCGGGGGCTGGGTGTGCAC +
Preference number: 4 (lower is better)
Translates to: NPSRMIDFRQAFPSAKTTGADCP*RGLGVH
Trigger: GTGCACACCCAGCCCCCGCCACGGGCAGTCGGCTCC...CGTGGTCTTCGCAGAGGGGAAGGCCTGTCTAAAGTCAATCATCCGAGATGGGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CCA 90 bp ACGCCTTCCACAACAGCACAGGTGGTTCTCTGCTTCACTGGCAGAACCACACAAAGGGGTCGCCGTGGCTaGGGAGCCGACTGCCCGTGG +
Preference number: 4 (lower is better)
Translates to: TPSTTAQVVLCFTGRTTQRGRRG*GADCPW
Trigger: CCACGGGCAGTCGGCTCCCCAGCCACGGCGACCCCT...TTGTGTGGTTCTGCCAGTGAAGCAGAGAACCACCTGTGCTGTTGTGGAAGGCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR TCA 90 bp TGTGACATCTGTACTACCATTGCCTCTGCGTGGTCCTCTGGGCCTCACGCCAGCGCTGCCTTCTGTGGCTaGCCGATCGCCACGCTGATC +
Preference number: 4 (lower is better)
Translates to: CDICTTIASAWSSGPHASAAFCG*PIATLI
Trigger: GATCAGCGTGGCGATCGGTCAGCCACAGAAGGCAGC...GCTGGCGTGAGGCCCAGAGGACCACGCAGAGGCAATGGTAGTACAGATGTCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR GCA 90 bp ACGCCTTCCACAACAGCACAGGTGGTTCTCTGCTTCACTGGCAGAACCACACAAGTGAGCTGGGGGCTCTaGTGCTGCGGCGGCTGCGAG +
Preference number: 4 (lower is better)
Translates to: TPSTTAQVVLCFTGRTTQVSWGL*CCGGCE
Trigger: CTCGCAGCCGCCGCAGCAGCAGAGCCCCCAGCTCAC...TTGTGTGGTTCTGCCAGTGAAGCAGAGAACCACCTGTGCTGTTGTGGAAGGCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR GCA 90 bp TCCATTGTATGCTCCTCACACACGGCAGACGGCTTCTGTGGCGTGCAAAGCACTCTTCTGCTGGACGGCTaGCGGGCCCTGTGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: SIVCSSHTADGFCGVQSTLLLDG*RALCSL
Trigger: CAGGCTGCACAGGGCCCGGCAGCCGTCCAGCAGAAG...AGTGCTTTGCACGCCACAGAAGCCGTCTGCCGTGTGTGAGGAGCATACAATGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR GCA 90 bp TGTGACATCTGTACTACCATTGCCTCTGCGTGGTCCTCTGGGCCTCACGCCAGCCTCAGCTCAGGGAACTaGAGCAGGCGTGGAGCCGTG +
Preference number: 4 (lower is better)
Translates to: CDICTTIASAWSSGPHASLSSGN*SRRGAV
Trigger: CACGGCTCCACGCCTGCTGCAGTTCCCTGAGCTGAG...GCTGGCGTGAGGCCCAGAGGACCACGCAGAGGCAATGGTAGTACAGATGTCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR GCA 90 bp TCCATTGTATGCTCCTCACACACGGCAGACGGCTTCTGTGGCGTGCAAAGCACTGCCTTCGCTGGGGCCTaGACAGGCTGTGGCTGGGTC +
Preference number: 4 (lower is better)
Translates to: SIVCSSHTADGFCGVQSTAFAGA*TGCGWV
Trigger: GACCCAGCCACAGCCTGTGCAGGCCCCAGCGAAGGC...AGTGCTTTGCACGCCACAGAAGCCGTCTGCCGTGTGTGAGGAGCATACAATGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CCA 90 bp CAGCACAGGTGGTTCTCTGCTTCACTGGCAGAACCACACAAGCTTATCCTAGAGGGAGCGCCTGGAGTCTaGAGCGGGGCCGACGCCGTG +
Preference number: 4 (lower is better)
Translates to: QHRWFSASLAEPHKLILEGAPGV*SGADAV
Trigger: CACGGCGTCGGCCCCGCTCCAGACTCCAGGCGCTCC...CTCTAGGATAAGCTTGTGTGGTTCTGCCAGTGAAGCAGAGAACCACCTGTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CCA 90 bp CTGATCATTTCCCTTGAACACAGGCCAGGAACGTGCCTTGTGTGTTTAGGTGGGGGGCGGGGGCTGGCCTaGGGTGGAGGCCTGTGCTGT +
Preference number: 4 (lower is better)
Translates to: LIISLEHRPGTCLVCLGGGRGLA*GGGLCC
Trigger: ACAGCACAGGCCTCCACCCCAGGCCAGCCCCCGCCC...CCCACCTAAACACACAAGGCACGTTCCTGGCCTGTGTTCAAGGGAAATGATCAG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR GCA 90 bp AACCCATCTCGGATGATTGACTTTAGACAGGCCTTCCCCTCTGCGAAGACCACGAGCCTCCCGGGCAGCTaGGGCAGTGGGGTGTGCAAG +
Preference number: 4 (lower is better)
Translates to: NPSRMIDFRQAFPSAKTTSLPGS*GSGVCK
Trigger: CTTGCACACCCCACTGCCGCAGCTGCCCGGGAGGCT...CGTGGTCTTCGCAGAGGGGAAGGCCTGTCTAAAGTCAATCATCCGAGATGGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR GCA 90 bp TATGCTCCTCACACACGGCAGACGGCTTCTGTGGCGTGCAAAGCACTACATGCTGGATGGGGAGTTGGCTaGTGGGCGGTGCAGGGATGG +
Preference number: 4 (lower is better)
Translates to: YAPHTRQTASVACKALHAGWGVG*WAVQGW
Trigger: CCATCCCTGCACCGCCCAGCAGCCAACTCCCCATCC...AGCATGTAGTGCTTTGCACGCCACAGAAGCCGTCTGCCGTGTGTGAGGAGCATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR GCA 90 bp AACCCATCTCGGATGATTGACTTTAGACAGGCCTTCCCCTCTGCGAAGACCACGCTGGAGAGGAACGCCTaGGTCCGCCCCTGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: NPSRMIDFRQAFPSAKTTLERNA*VRPWVL
Trigger: CAGCACCCAGGGGCGGACGCAGGCGTTCCTCTCCAG...CGTGGTCTTCGCAGAGGGGAAGGCCTGTCTAAAGTCAATCATCCGAGATGGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR GCA 90 bp GCTGTCGTAAGTCCACAAGGAAGAGTTGACTGGGCCCACCGCTATAGCCAATACGGTTGGCCACGGTGGTaGCCGTCAGCAGGGCACCAG +
Preference number: 4 (lower is better)
Translates to: AVVSPQGRVDWAHRYSQYGWPRW*PSAGHQ
Trigger: CTGGTGCCCTGCTGACGGGCACCACCGTGGCCAACC...GTATTGGCTATAGCGGTGGGCCCAGTCAACTCTTCCTTGTGGACTTACGACAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR GCA 90 bp TCCCAGGGTCGCCAATTAGAGTCTGACAGTGTTCGGGCTGCTGCCTTTATAGTCCTTCTGCTGGACGGCTaGCGGGCCCTGTGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: SQGRQLESDSVRAAAFIVLLLDG*RALCSL
Trigger: CAGGCTGCACAGGGCCCGGCAGCCGTCCAGCAGAAG...GACTATAAAGGCAGCAGCCCGAACACTGTCAGACTCTAATTGGCGACCCTGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR GCA 90 bp CCTCATCGTACCCTCAGCTGTGACATCTGTACTACCATTGCCTCTGCGTGGTCCACTGCAGGGATCATCTaGACCTGCTGCCCGGCCGCC +
Preference number: 4 (lower is better)
Translates to: PHRTLSCDICTTIASAWSTAGII*TCCPAA
Trigger: GGCGGCCGGGCAGCAGGTGCAGATGATCCCTGCAGT...GGACCACGCAGAGGCAATGGTAGTACAGATGTCACAGCTGAGGGTACGATGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR GCA 90 bp TGTGACATCTGTACTACCATTGCCTCTGCGTGGTCCTCTGGGCCTCACGCCAGCCCTGGGACCAGGAAGTaGACCATGGTCCAGAGCTCC +
Preference number: 4 (lower is better)
Translates to: CDICTTIASAWSSGPHASPGTRK*TMVQSS
Trigger: GGAGCTCTGGACCATGGTGCACTTCCTGGTCCCAGG...GCTGGCGTGAGGCCCAGAGGACCACGCAGAGGCAATGGTAGTACAGATGTCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR GCA 90 bp GCTGTCGTAAGTCCACAAGGAAGAGTTGACTGGGCCCACCGCTATAGCCAATACTCCGGGGCGGGTGAGTaGTGGGGAAAGCCACGGTGC +
Preference number: 4 (lower is better)
Translates to: AVVSPQGRVDWAHRYSQYSGAGE*WGKPRC
Trigger: GCACCGTGGCTTTCCCCAGCACTCACCCGCCCCGGA...GTATTGGCTATAGCGGTGGGCCCAGTCAACTCTTCCTTGTGGACTTACGACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CCA 90 bp TGTGACATCTGTACTACCATTGCCTCTGCGTGGTCCTCTGGGCCTCACGCCAGCGAGCGCCACAGTCTGTaGAGAAGCCTGCTGGGAAGC +
Preference number: 4 (lower is better)
Translates to: CDICTTIASAWSSGPHASERHSL*RSLLGS
Trigger: GCTTCCCAGCAGGCTTCTCCACAGACTGTGGCGCTC...GCTGGCGTGAGGCCCAGAGGACCACGCAGAGGCAATGGTAGTACAGATGTCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CCA 90 bp TCCATTGTATGCTCCTCACACACGGCAGACGGCTTCTGTGGCGTGCAAAGCACTCAGCTTTGCTGCTGCTaGTCGGGCTGCTGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: SIVCSSHTADGFCGVQSTQLCCC*SGCWGC
Trigger: GCAGCCCCAGCAGCCCGACCAGCAGCAGCAAAGCTG...AGTGCTTTGCACGCCACAGAAGCCGTCTGCCGTGTGTGAGGAGCATACAATGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CCA 90 bp TATGCTCCTCACACACGGCAGACGGCTTCTGTGGCGTGCAAAGCACTACATGCTGAACTGCAGCAGGCGTaGAGCCGTGGTCTGCCGCAG +
Preference number: 4 (lower is better)
Translates to: YAPHTRQTASVACKALHAELQQA*SRGLPQ
Trigger: CTGCGGCAGACCACGGCTCCACGCCTGCTGCAGTTC...AGCATGTAGTGCTTTGCACGCCACAGAAGCCGTCTGCCGTGTGTGAGGAGCATA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
3UTR CAA 72 bp CTCATCGTACCCTCAGCTGTGACATCTGTACTACCATaGCCTCTGCGTGGTCCTCTGGGCCTCACGCCAGCC +
Preference number: 4 (lower is better)
Translates to: LIVPSAVTSVLP*PLRGPLGLTPA
Trigger: GGCTGGCGTGAGGCCCAGAGGACCACGCAGAGGCAATGGTAGTACAGATGTCACAGCTGAGGGTACGATGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR GCA 90 bp ACGCCTTCCACAACAGCACAGGTGGTTCTCTGCTTCACTGGCAGAACCACACAACGCAGAGGAGAGGGCTaGAGTGGGAACACCGGCTGG +
Preference number: 4 (lower is better)
Translates to: TPSTTAQVVLCFTGRTTQRRGEG*SGNTGW
Trigger: CCAGCCGGTGTTCCCACTGCAGCCCTCTCCTCTGCG...TTGTGTGGTTCTGCCAGTGAAGCAGAGAACCACCTGTGCTGTTGTGGAAGGCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR GCA 90 bp AGAGGAAGCCATGTTGTCACTTTTTCCATGAGCCACGTAGTACAGAGAACGCGGGTGAGCTGGGGGCTCTaGTGCTGCGGCGGCTGCGAG +
Preference number: 4 (lower is better)
Translates to: RGSHVVTFSMSHVVQRTRVSWGL*CCGGCE
Trigger: CTCGCAGCCGCCGCAGCAGCAGAGCCCCCAGCTCAC...CCGCGTTCTCTGTACTACGTGGCTCATGGAAAAAGTGACAACATGGCTTCCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR GCA 90 bp TGTGACATCTGTACTACCATTGCCTCTGCGTGGTCCTCTGGGCCTCACGCCAGCCACGGTCTGTCCTGCTaGCTTCTGTGGCTGACCGAT +
Preference number: 4 (lower is better)
Translates to: CDICTTIASAWSSGPHASHGLSC*LLWLTD
Trigger: ATCGGTCAGCCACAGAAGGCAGCAGGACAGACCGTG...GCTGGCGTGAGGCCCAGAGGACCACGCAGAGGCAATGGTAGTACAGATGTCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR GCA 90 bp CCTCATCGTACCCTCAGCTGTGACATCTGTACTACCATTGCCTCTGCGTGGTCCAGCTTCAGCAGCTGCTaGATGTGCACGGGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: PHRTLSCDICTTIASAWSSFSSC*MCTGWA
Trigger: GGCCCAGCCCGTGCACATGCAGCAGCTGCTGAAGCT...GGACCACGCAGAGGCAATGGTAGTACAGATGTCACAGCTGAGGGTACGATGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR GCA 90 bp TGTGACATCTGTACTACCATTGCCTCTGCGTGGTCCTCTGGGCCTCACGCCAGCGAAGCAGAGGCAACTTaGTGGATGCTGGCCACGGGT +
Preference number: 4 (lower is better)
Translates to: CDICTTIASAWSSGPHASEAEAT*WMLATG
Trigger: ACCCGTGGCCAGCATCCAGCAAGTTGCCTCTGCTTC...GCTGGCGTGAGGCCCAGAGGACCACGCAGAGGCAATGGTAGTACAGATGTCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR GCA 90 bp CTGATCATTTCCCTTGAACACAGGCCAGGAACGTGCCTTGTGTGTTTAGGTGGGACGCTGCCTTGCAGCTaGAGCGGCTGGCCCGCTGTG +
Preference number: 4 (lower is better)
Translates to: LIISLEHRPGTCLVCLGGTLPCS*SGWPAV
Trigger: CACAGCGGGCCAGCCGCTGCAGCTGCAAGGCAGCGT...CCCACCTAAACACACAAGGCACGTTCCTGGCCTGTGTTCAAGGGAAATGATCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR GCA 90 bp CTGATCATTTCCCTTGAACACAGGCCAGGAACGTGCCTTGTGTGTTTAGGTGGGATGTCGCTGTCGTCCTaGGGCGGGGTGGGTGGGGTC +
Preference number: 4 (lower is better)
Translates to: LIISLEHRPGTCLVCLGGMSLSS*GGVGGV
Trigger: GACCCCACCCACCCCGCCGCAGGACGACAGCGACAT...CCCACCTAAACACACAAGGCACGTTCCTGGCCTGTGTTCAAGGGAAATGATCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CCA 90 bp TATGCTCCTCACACACGGCAGACGGCTTCTGTGGCGTGCAAAGCACTACATGCTGTCTGCACTTGCACTTaGGCTGTTGGCTGCGGGGGC +
Preference number: 4 (lower is better)
Translates to: YAPHTRQTASVACKALHAVCTCT*AVGCGG
Trigger: GCCCCCGCAGCCAACAGCCCAAGTGCAAGTGCAGAC...AGCATGTAGTGCTTTGCACGCCACAGAAGCCGTCTGCCGTGTGTGAGGAGCATA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CCA 90 bp CAGCACAGGTGGTTCTCTGCTTCACTGGCAGAACCACACAAGCTTATCCTAGAGCAGGGCACCAGGCCTTaGGGCCGTGACCGTCGTGAG +
Preference number: 4 (lower is better)
Translates to: QHRWFSASLAEPHKLILEQGTRP*GRDRRE
Trigger: CTCACGACGGTCACGGCCCCAAGGCCTGGTGCCCTG...CTCTAGGATAAGCTTGTGTGGTTCTGCCAGTGAAGCAGAGAACCACCTGTGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CCA 90 bp TATGCTCCTCACACACGGCAGACGGCTTCTGTGGCGTGCAAAGCACTACATGCTTGCATGTGCACGGGCTaGGCCACCACGGTCTGTCCT +
Preference number: 4 (lower is better)
Translates to: YAPHTRQTASVACKALHACMCTG*ATTVCP
Trigger: AGGACAGACCGTGGTGGCCCAGCCCGTGCACATGCA...AGCATGTAGTGCTTTGCACGCCACAGAAGCCGTCTGCCGTGTGTGAGGAGCATA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CCA 90 bp CAGCACAGGTGGTTCTCTGCTTCACTGGCAGAACCACACAAGCTTATCCTAGAGTGGGTTGGGAGCGCCTaGAGTCTGGAGCGGGGCCGA +
Preference number: 4 (lower is better)
Translates to: QHRWFSASLAEPHKLILEWVGSA*SLERGR
Trigger: TCGGCCCCGCTCCAGACTCCAGGCGCTCCCAACCCA...CTCTAGGATAAGCTTGTGTGGTTCTGCCAGTGAAGCAGAGAACCACCTGTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR TCA 90 bp GCTGTCGTAAGTCCACAAGGAAGAGTTGACTGGGCCCACCGCTATAGCCAATACCTGGACCTCTGCAGCTaGTGCTGGACGTTCTGGGGG +
Preference number: 4 (lower is better)
Translates to: AVVSPQGRVDWAHRYSQYLDLCS*CWTFWG
Trigger: CCCCCAGAACGTCCAGCATCAGCTGCAGAGGTCCAG...GTATTGGCTATAGCGGTGGGCCCAGTCAACTCTTCCTTGTGGACTTACGACAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR TCA 90 bp TATGCTCCTCACACACGGCAGACGGCTTCTGTGGCGTGCAAAGCACTACATGCTGCTTGCCCACAGCTTTaGTCTGTGCTGGGGACTGGG +
Preference number: 4 (lower is better)
Translates to: YAPHTRQTASVACKALHAACPQL*SVLGTG
Trigger: CCCAGTCCCCAGCACAGATCAAAGCTGTGGGCAAGC...AGCATGTAGTGCTTTGCACGCCACAGAAGCCGTCTGCCGTGTGTGAGGAGCATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR TCA 90 bp CTATGTCAAATACCAGCTTCCCCCGAAAACTGGAGATGCGTCTTGAGTGCACTGGGTGGTGACTCCCGGTaGGGAGACCACAGCTGCCGG +
Preference number: 4 (lower is better)
Translates to: LCQIPASPENWRCVLSALGGDSR*GDHSCR
Trigger: CCGGCAGCTGTGGTCTCCTCACCGGGAGTCACCACC...CAGTGCACTCAAGACGCATCTCCAGTTTTCGGGGGAAGCTGGTATTTGACATAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR TCA 90 bp AGAGGAAGCCATGTTGTCACTTTTTCCATGAGCCACGTAGTACAGAGAACGCGGTTCGGCCGGGGCCACTaGGAACTCGGCAGGAAGGCG +
Preference number: 4 (lower is better)
Translates to: RGSHVVTFSMSHVVQRTRFGRGH*ELGRKA
Trigger: CGCCTTCCTGCCGAGTTCTCAGTGGCCCCGGCCGAA...CCGCGTTCTCTGTACTACGTGGCTCATGGAAAAAGTGACAACATGGCTTCCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR TCA 90 bp TCCATTGTATGCTCCTCACACACGGCAGACGGCTTCTGTGGCGTGCAAAGCACTCTTCAGCCACCGCAGTaGCGTCCGCAATGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: SIVCSSHTADGFCGVQSTLQPPQ*RPQCPW
Trigger: CCAAGGACATTGCGGACGTCACTGCGGTGGCTGAAG...AGTGCTTTGCACGCCACAGAAGCCGTCTGCCGTGTGTGAGGAGCATACAATGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR TCA 90 bp AGAGGAAGCCATGTTGTCACTTTTTCCATGAGCCACGTAGTACAGAGAACGCGGACCGGCGTCTCTGGCTaGGCCACGCGGCTCTGTGGT +
Preference number: 4 (lower is better)
Translates to: RGSHVVTFSMSHVVQRTRTGVSG*ATRLCG
Trigger: ACCACAGAGCCGCGTGGCTCAGCCAGAGACGCCGGT...CCGCGTTCTCTGTACTACGTGGCTCATGGAAAAAGTGACAACATGGCTTCCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR TCA 90 bp CCTCATCGTACCCTCAGCTGTGACATCTGTACTACCATTGCCTCTGCGTGGTCCCACTCGGGGTTGTCTTaGCCAGGCTCAGCTGTGGGT +
Preference number: 4 (lower is better)
Translates to: PHRTLSCDICTTIASAWSHSGLS*PGSAVG
Trigger: ACCCACAGCTGAGCCTGGTCAAGACAACCCCGAGTG...GGACCACGCAGAGGCAATGGTAGTACAGATGTCACAGCTGAGGGTACGATGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR GCA 90 bp TGTGACATCTGTACTACCATTGCCTCTGCGTGGTCCTCTGGGCCTCACGCCAGCGTGATGTTCACGTTCTaGCCGGTTGCAGGGCTCCTA +
Preference number: 4 (lower is better)
Translates to: CDICTTIASAWSSGPHASVMFTF*PVAGLL
Trigger: TAGGAGCCCTGCAACCGGGCAGAACGTGAACATCAC...GCTGGCGTGAGGCCCAGAGGACCACGCAGAGGCAATGGTAGTACAGATGTCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR GCA 90 bp TCCATTGTATGCTCCTCACACACGGCAGACGGCTTCTGTGGCGTGCAAAGCACTGGCTGCTGTGCAAACTaGAGCGCAGAGGAGAGGGCT +
Preference number: 4 (lower is better)
Translates to: SIVCSSHTADGFCGVQSTGCCAN*SAEERA
Trigger: AGCCCTCTCCTCTGCGCTGCAGTTTGCACAGCAGCC...AGTGCTTTGCACGCCACAGAAGCCGTCTGCCGTGTGTGAGGAGCATACAATGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR GCA 90 bp ACGCCTTCCACAACAGCACAGGTGGTTCTCTGCTTCACTGGCAGAACCACACAATGCTGCTGCGGCGGCTaGGAGGTCTGCACTTGCACT +
Preference number: 4 (lower is better)
Translates to: TPSTTAQVVLCFTGRTTQCCCGG*EVCTCT
Trigger: AGTGCAAGTGCAGACCTCGCAGCCGCCGCAGCAGCA...TTGTGTGGTTCTGCCAGTGAAGCAGAGAACCACCTGTGCTGTTGTGGAAGGCGT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR GCA 90 bp CCTCATCGTACCCTCAGCTGTGACATCTGTACTACCATTGCCTCTGCGTGGTCCATCTGGGTCTGCACTTaGTGGGCCCCGGCCAGTTTC +
Preference number: 4 (lower is better)
Translates to: PHRTLSCDICTTIASAWSIWVCT*WAPASF
Trigger: GAAACTGGCCGGGGCCCAGCAAGTGCAGACCCAGAT...GGACCACGCAGAGGCAATGGTAGTACAGATGTCACAGCTGAGGGTACGATGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR GCA 90 bp CAGCACAGGTGGTTCTCTGCTTCACTGGCAGAACCACACAAGCTTATCCTAGAGACTGCAGGGATCATCTaGACCTGCTGCCCGGCCGCC +
Preference number: 4 (lower is better)
Translates to: QHRWFSASLAEPHKLILETAGII*TCCPAA
Trigger: GGCGGCCGGGCAGCAGGTGCAGATGATCCCTGCAGT...CTCTAGGATAAGCTTGTGTGGTTCTGCCAGTGAAGCAGAGAACCACCTGTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR GCA 90 bp CCTCATCGTACCCTCAGCTGTGACATCTGTACTACCATTGCCTCTGCGTGGTCCGGCAGTCGCGGTCACTaGAGGGATCATCTGCACCTG +
Preference number: 4 (lower is better)
Translates to: PHRTLSCDICTTIASAWSGSRGH*RDHLHL
Trigger: CAGGTGCAGATGATCCCTGCAGTGACCGCGACTGCC...GGACCACGCAGAGGCAATGGTAGTACAGATGTCACAGCTGAGGGTACGATGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR GCA 90 bp GCTGTCGTAAGTCCACAAGGAAGAGTTGACTGGGCCCACCGCTATAGCCAATACGAGAGGCAGCCCTGCTaGCCTGACTACTGGCACGGA +
Preference number: 4 (lower is better)
Translates to: AVVSPQGRVDWAHRYSQYERQPC*PDYWHG
Trigger: TCCGTGCCAGTAGTCAGGGCAGCAGGGCTGCCTCTC...GTATTGGCTATAGCGGTGGGCCCAGTCAACTCTTCCTTGTGGACTTACGACAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR GCA 90 bp AACCCATCTCGGATGATTGACTTTAGACAGGCCTTCCCCTCTGCGAAGACCACGGAGAGGCAGCCCTGCTaGCCTGACTACTGGCACGGA +
Preference number: 4 (lower is better)
Translates to: NPSRMIDFRQAFPSAKTTERQPC*PDYWHG
Trigger: TCCGTGCCAGTAGTCAGGGCAGCAGGGCTGCCTCTC...CGTGGTCTTCGCAGAGGGGAAGGCCTGTCTAAAGTCAATCATCCGAGATGGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR GCA 90 bp CCTCATCGTACCCTCAGCTGTGACATCTGTACTACCATTGCCTCTGCGTGGTCCGATGAGAGGCAGCCCTaGTGCCCTGACTACTGGCAC +
Preference number: 4 (lower is better)
Translates to: PHRTLSCDICTTIASAWSDERQP*CPDYWH
Trigger: GTGCCAGTAGTCAGGGCAGCAGGGCTGCCTCTCATC...GGACCACGCAGAGGCAATGGTAGTACAGATGTCACAGCTGAGGGTACGATGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR GCA 90 bp TCCCAGGGTCGCCAATTAGAGTCTGACAGTGTTCGGGCTGCTGCCTTTATAGTCCACGGCCGGCTGCTGTaGCTTCTGCTGATCAGCCAG +
Preference number: 4 (lower is better)
Translates to: SQGRQLESDSVRAAAFIVHGRLL*LLLISQ
Trigger: CTGGCTGATCAGCAGAAGGCACAGCAGCCGGCCGTG...GACTATAAAGGCAGCAGCCCGAACACTGTCAGACTCTAATTGGCGACCCTGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR GCA 90 bp AACACACTATGTCAAATACCAGCTTCCCCCGAAAACTGGAGATGCGTCTTGAGTGGCGGGGGCTGGGTGTaGACCACCTGGGCGGGAGCA +
Preference number: 4 (lower is better)
Translates to: NTLCQIPASPENWRCVLSGGGWV*TTWAGA
Trigger: TGCTCCCGCCCAGGTGGTGCACACCCAGCCCCCGCC...ACTCAAGACGCATCTCCAGTTTTCGGGGGAAGCTGGTATTTGACATAGTGTGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CCA 90 bp CTGTTTAACACACTATGTCAAATACCAGCTTCCCCCGAAAACTGGAGATGCGTCAGGAGGGCGGGAGGATaGAAGCCGCGCCGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: LFNTLCQIPASPENWRCVRRAGG*KPRRSR
Trigger: GCGGCTGCGGCGCGGCTTCCATCCTCCCGCCCTCCT...GACGCATCTCCAGTTTTCGGGGGAAGCTGGTATTTGACATAGTGTGTTAAACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CCA 90 bp ACGCCTTCCACAACAGCACAGGTGGTTCTCTGCTTCACTGGCAGAACCACACAAGCTCTGCCATACCTGTaGAGGGCATCGCCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: TPSTTAQVVLCFTGRTTQALPYL*RASPAA
Trigger: GGCAGCAGGCGATGCCCTCCACAGGTATGGCAGAGC...TTGTGTGGTTCTGCCAGTGAAGCAGAGAACCACCTGTGCTGTTGTGGAAGGCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CCA 90 bp CAGCACAGGTGGTTCTCTGCTTCACTGGCAGAACCACACAAGCTTATCCTAGAGGCCTGCGTCCGCCCCTaGGTGCTGGAAAACTACCCC +
Preference number: 4 (lower is better)
Translates to: QHRWFSASLAEPHKLILEACVRP*VLENYP
Trigger: GGGGTAGTTTTCCAGCACCCAGGGGCGGACGCAGGC...CTCTAGGATAAGCTTGTGTGGTTCTGCCAGTGAAGCAGAGAACCACCTGTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CCA 90 bp TGTGACATCTGTACTACCATTGCCTCTGCGTGGTCCTCTGGGCCTCACGCCAGCCTGGCCCTGGATCTGTaGAACTTGCACCTGAGAGGT +
Preference number: 4 (lower is better)
Translates to: CDICTTIASAWSSGPHASLALDL*NLHLRG
Trigger: ACCTCTCAGGTGCAAGTTCCACAGATCCAGGGCCAG...GCTGGCGTGAGGCCCAGAGGACCACGCAGAGGCAATGGTAGTACAGATGTCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CCA 90 bp AGAGGAAGCCATGTTGTCACTTTTTCCATGAGCCACGTAGTACAGAGAACGCGGCAGGGCACCAGGCCTTaGGGCCGTGACCGTCGTGAG +
Preference number: 4 (lower is better)
Translates to: RGSHVVTFSMSHVVQRTRQGTRP*GRDRRE
Trigger: CTCACGACGGTCACGGCCCCAAGGCCTGGTGCCCTG...CCGCGTTCTCTGTACTACGTGGCTCATGGAAAAAGTGACAACATGGCTTCCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CCA 90 bp CCTCATCGTACCCTCAGCTGTGACATCTGTACTACCATTGCCTCTGCGTGGTCCTCCTGCTGCCTTCTGTaGCTGACCGATCGCCACGCT +
Preference number: 4 (lower is better)
Translates to: PHRTLSCDICTTIASAWSSCCLL*LTDRHA
Trigger: AGCGTGGCGATCGGTCAGCCACAGAAGGCAGCAGGA...GGACCACGCAGAGGCAATGGTAGTACAGATGTCACAGCTGAGGGTACGATGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CCA 90 bp GCTGTCGTAAGTCCACAAGGAAGAGTTGACTGGGCCCACCGCTATAGCCAATACTGGGTCTGCACTTGCTaGGCCCCGGCCAGTTTCTGG +
Preference number: 4 (lower is better)
Translates to: AVVSPQGRVDWAHRYSQYWVCTC*APASFW
Trigger: CCAGAAACTGGCCGGGGCCCAGCAAGTGCAGACCCA...GTATTGGCTATAGCGGTGGGCCCAGTCAACTCTTCCTTGTGGACTTACGACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CCA 90 bp TCCCAGGGTCGCCAATTAGAGTCTGACAGTGTTCGGGCTGCTGCCTTTATAGTCTGGGTCTGCACTTGCTaGGCCCCGGCCAGTTTCTGG +
Preference number: 4 (lower is better)
Translates to: SQGRQLESDSVRAAAFIVWVCTC*APASFW
Trigger: CCAGAAACTGGCCGGGGCCCAGCAAGTGCAGACCCA...GACTATAAAGGCAGCAGCCCGAACACTGTCAGACTCTAATTGGCGACCCTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CCA 90 bp TCCATTGTATGCTCCTCACACACGGCAGACGGCTTCTGTGGCGTGCAAAGCACTGAGCGCCACAGTCTGTaGAGAAGCCTGCTGGGAAGC +
Preference number: 4 (lower is better)
Translates to: SIVCSSHTADGFCGVQSTERHSL*RSLLGS
Trigger: GCTTCCCAGCAGGCTTCTCCACAGACTGTGGCGCTC...AGTGCTTTGCACGCCACAGAAGCCGTCTGCCGTGTGTGAGGAGCATACAATGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CCA 90 bp ACGCCTTCCACAACAGCACAGGTGGTTCTCTGCTTCACTGGCAGAACCACACAAACCATTGCCTCTGCGTaGTCCTCTGGGCCTCACGCC +
Preference number: 4 (lower is better)
Translates to: TPSTTAQVVLCFTGRTTQTIASA*SSGPHA
Trigger: GGCGTGAGGCCCAGAGGACCACGCAGAGGCAATGGT...TTGTGTGGTTCTGCCAGTGAAGCAGAGAACCACCTGTGCTGTTGTGGAAGGCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CCA 90 bp CAGCACAGGTGGTTCTCTGCTTCACTGGCAGAACCACACAAGCTTATCCTAGAGCACGTAGGAAGAGCCTaGGTGCCGGGGCTCGACGAG +
Preference number: 4 (lower is better)
Translates to: QHRWFSASLAEPHKLILEHVGRA*VPGLDE
Trigger: CTCGTCGAGCCCCGGCACCCAGGCTCTTCCTACGTG...CTCTAGGATAAGCTTGTGTGGTTCTGCCAGTGAAGCAGAGAACCACCTGTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CCA 90 bp TCCCAGGGTCGCCAATTAGAGTCTGACAGTGTTCGGGCTGCTGCCTTTATAGTCGATTGGCAGAGAACGTaGCGATGGGCGGCCGTCCTC +
Preference number: 4 (lower is better)
Translates to: SQGRQLESDSVRAAAFIVDWQRT*RWAAVL
Trigger: GAGGACGGCCGCCCATCGCCACGTTCTCTGCCAATC...GACTATAAAGGCAGCAGCCCGAACACTGTCAGACTCTAATTGGCGACCCTGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CCA 90 bp GCTGTCGTAAGTCCACAAGGAAGAGTTGACTGGGCCCACCGCTATAGCCAATACTCACTACCTCTCCACTaGGCAAGCGGGCCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: AVVSPQGRVDWAHRYSQYSLPLH*ASGPGP
Trigger: AGGCCCAGGCCCGCTTGCCCAGTGGAGAGGTAGTGA...GTATTGGCTATAGCGGTGGGCCCAGTCAACTCTTCCTTGTGGACTTACGACAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CCA 90 bp AACACACTATGTCAAATACCAGCTTCCCCCGAAAACTGGAGATGCGTCTTGAGTTCAAGGGTGCAGGGCTaGGACCGCCGGCCGGGGGCT +
Preference number: 4 (lower is better)
Translates to: NTLCQIPASPENWRCVLSSRVQG*DRRPGA
Trigger: AGCCCCCGGCCGGCGGTCCCAGCCCTGCACCCTTGA...ACTCAAGACGCATCTCCAGTTTTCGGGGGAAGCTGGTATTTGACATAGTGTGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CCA 90 bp ACGCCTTCCACAACAGCACAGGTGGTTCTCTGCTTCACTGGCAGAACCACACAAAGTGTAACTGTGCGCTaGCCCGGCCTCCTTCCCACG +
Preference number: 4 (lower is better)
Translates to: TPSTTAQVVLCFTGRTTQSVTVR*PGLLPT
Trigger: CGTGGGAAGGAGGCCGGGCCAGCGCACAGTTACACT...TTGTGTGGTTCTGCCAGTGAAGCAGAGAACCACCTGTGCTGTTGTGGAAGGCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR TCA 90 bp CAGCACAGGTGGTTCTCTGCTTCACTGGCAGAACCACACAAGCTTATCCTAGAGGCAGTGGGGCCAGTGTaGTCTGCTGGTTTCCCCCGA +
Preference number: 4 (lower is better)
Translates to: QHRWFSASLAEPHKLILEAVGPV*SAGFPR
Trigger: TCGGGGGAAACCAGCAGATCACACTGGCCCCACTGC...CTCTAGGATAAGCTTGTGTGGTTCTGCCAGTGAAGCAGAGAACCACCTGTGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR TCA 90 bp CAGCACAGGTGGTTCTCTGCTTCACTGGCAGAACCACACAAGCTTATCCTAGAGGCTGCCTTCTGTGGCTaGCCGATCGCCACGCTGATC +
Preference number: 4 (lower is better)
Translates to: QHRWFSASLAEPHKLILEAAFCG*PIATLI
Trigger: GATCAGCGTGGCGATCGGTCAGCCACAGAAGGCAGC...CTCTAGGATAAGCTTGTGTGGTTCTGCCAGTGAAGCAGAGAACCACCTGTGCTG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR TCA 90 bp AGGTGGTTCTCTGCTTCACTGGCAGAACCACACAAGCTTATCCTAGAGAAAATCCCGCCGTCGCCTGCGTaGGCGCCACAGTCTGTGGAG +
Preference number: 4 (lower is better)
Translates to: RWFSASLAEPHKLILEKIPPSPA*APQSVE
Trigger: CTCCACAGACTGTGGCGCTCACGCAGGCGACGGCGG...GATTTTCTCTAGGATAAGCTTGTGTGGTTCTGCCAGTGAAGCAGAGAACCACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR TCA 90 bp AGAGGAAGCCATGTTGTCACTTTTTCCATGAGCCACGTAGTACAGAGAACGCGGGCAGCCCTGCTGCCCTaGCTACTGGCACGGAGGCTT +
Preference number: 4 (lower is better)
Translates to: RGSHVVTFSMSHVVQRTRAALLP*LLARRL
Trigger: AAGCCTCCGTGCCAGTAGTCAGGGCAGCAGGGCTGC...CCGCGTTCTCTGTACTACGTGGCTCATGGAAAAAGTGACAACATGGCTTCCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR TCA 90 bp ACGCCTTCCACAACAGCACAGGTGGTTCTCTGCTTCACTGGCAGAACCACACAAACAGGAGACCCTCACTaGCGTGAGATCGGGGCGGAA +
Preference number: 4 (lower is better)
Translates to: TPSTTAQVVLCFTGRTTQTGDPH*REIGAE
Trigger: TTCCGCCCCGATCTCACGTCAGTGAGGGTCTCCTGT...TTGTGTGGTTCTGCCAGTGAAGCAGAGAACCACCTGTGCTGTTGTGGAAGGCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR TCA 90 bp TCCATTGTATGCTCCTCACACACGGCAGACGGCTTCTGTGGCGTGCAAAGCACTGGCTCTGTGGTCCTGTaGTGGATGCCAGCTGAGCTA +
Preference number: 4 (lower is better)
Translates to: SIVCSSHTADGFCGVQSTGSVVL*WMPAEL
Trigger: TAGCTCAGCTGGCATCCATCACAGGACCACAGAGCC...AGTGCTTTGCACGCCACAGAAGCCGTCTGCCGTGTGTGAGGAGCATACAATGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR TCA 90 bp CTATGTCAAATACCAGCTTCCCCCGAAAACTGGAGATGCGTCTTGAGTGCACTGTGCACAGCGCCCGCCTaGGACACGGTCTGCATCACC +
Preference number: 4 (lower is better)
Translates to: LCQIPASPENWRCVLSALCTAPA*DTVCIT
Trigger: GGTGATGCAGACCGTGTCTCAGGCGGGCGCTGTGCA...CAGTGCACTCAAGACGCATCTCCAGTTTTCGGGGGAAGCTGGTATTTGACATAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR TCA 90 bp AACCCATCTCGGATGATTGACTTTAGACAGGCCTTCCCCTCTGCGAAGACCACGACGCCAGGCGCTTGTTaGTGGACTGGAAGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: NPSRMIDFRQAFPSAKTTTPGAC*WTGRWQ
Trigger: CTGCCACCTTCCAGTCCATCAACAAGCGCCTGGCGT...CGTGGTCTTCGCAGAGGGGAAGGCCTGTCTAAAGTCAATCATCCGAGATGGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR TCA 90 bp TATGCTCCTCACACACGGCAGACGGCTTCTGTGGCGTGCAAAGCACTACATGCTAGGCTGTCACAGAAGTaGCCGCTCGAACACCCTGAG +
Preference number: 4 (lower is better)
Translates to: YAPHTRQTASVACKALHARLSQK*PLEHPE
Trigger: CTCAGGGTGTTCGAGCGGTCACTTCTGTGACAGCCT...AGCATGTAGTGCTTTGCACGCCACAGAAGCCGTCTGCCGTGTGTGAGGAGCATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR GCA 90 bp TCCATTGTATGCTCCTCACACACGGCAGACGGCTTCTGTGGCGTGCAAAGCACTCACTTGCGGCTGCTGTaGAAACTGCAGCGCAGAGGA +
Preference number: 4 (lower is better)
Translates to: SIVCSSHTADGFCGVQSTHLRLL*KLQRRG
Trigger: TCCTCTGCGCTGCAGTTTGCACAGCAGCCGCAAGTG...AGTGCTTTGCACGCCACAGAAGCCGTCTGCCGTGTGTGAGGAGCATACAATGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR GCA 90 bp AGAGGAAGCCATGTTGTCACTTTTTCCATGAGCCACGTAGTACAGAGAACGCGGTGGGGTGCCTGGGTCTaGATCTGCCCTTGCGCCTGC +
Preference number: 4 (lower is better)
Translates to: RGSHVVTFSMSHVVQRTRWGAWV*ICPCAC
Trigger: GCAGGCGCAAGGGCAGATGCAGACCCAGGCACCCCA...CCGCGTTCTCTGTACTACGTGGCTCATGGAAAAAGTGACAACATGGCTTCCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR GCA 90 bp GCTGTCGTAAGTCCACAAGGAAGAGTTGACTGGGCCCACCGCTATAGCCAATACCACCACGGTCTGTCCTaGTGCCTTCTGTGGCTGACC +
Preference number: 4 (lower is better)
Translates to: AVVSPQGRVDWAHRYSQYHHGLS*CLLWLT
Trigger: GGTCAGCCACAGAAGGCAGCAGGACAGACCGTGGTG...GTATTGGCTATAGCGGTGGGCCCAGTCAACTCTTCCTTGTGGACTTACGACAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR GCA 90 bp CTGTTTAACACACTATGTCAAATACCAGCTTCCCCCGAAAACTGGAGATGCGTCCCGGCCGCCGTCGCCTaGGTGAGCGCCACAGTCTGT +
Preference number: 4 (lower is better)
Translates to: LFNTLCQIPASPENWRCVPAAVA*VSATVC
Trigger: ACAGACTGTGGCGCTCACGCAGGCGACGGCGGCCGG...GACGCATCTCCAGTTTTCGGGGGAAGCTGGTATTTGACATAGTGTGTTAAACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR GCA 90 bp CCTCATCGTACCCTCAGCTGTGACATCTGTACTACCATTGCCTCTGCGTGGTCCTTCCCTGAGTCGAACTaGACCAGCCTCAGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: PHRTLSCDICTTIASAWSFPESN*TSLSSG
Trigger: CCCTGAGCTGAGGCTGGTGCAGTTCGACTCAGGGAA...GGACCACGCAGAGGCAATGGTAGTACAGATGTCACAGCTGAGGGTACGATGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR GCA 90 bp TATGCTCCTCACACACGGCAGACGGCTTCTGTGGCGTGCAAAGCACTACATGCTTGTTGCTGCTGCTGCTaGTGCTGCCTGAGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: YAPHTRQTASVACKALHACCCCC*CCLRSW
Trigger: CCAGCTTCTCAGGCAGCAGCAGCAGCAGCAGCAACA...AGCATGTAGTGCTTTGCACGCCACAGAAGCCGTCTGCCGTGTGTGAGGAGCATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CCA 90 bp ATTATATCTTTCCCAGTGCTGAATCTCTTGCGTGACATGGTCCCAAGGTTCACTGGGACGGGGGTGGGTTaGGGTGGGCCGGCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: IISFPVLNLLRDMVPRFTGTGVG*GGPAAP
Trigger: AGGAGCAGCCGGCCCACCCCAACCCACCCCCGTCCC...AGTGAACCTTGGGACCATGTCACGCAAGAGATTCAGCACTGGGAAAGATATAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CCA 90 bp AACCCATCTCGGATGATTGACTTTAGACAGGCCTTCCCCTCTGCGAAGACCACGGCCAGTGTGATCTGCTaGTTTCCCCCGACGACAGGG +
Preference number: 4 (lower is better)
Translates to: NPSRMIDFRQAFPSAKTTASVIC*FPPTTG
Trigger: CCCTGTCGTCGGGGGAAACCAGCAGATCACACTGGC...CGTGGTCTTCGCAGAGGGGAAGGCCTGTCTAAAGTCAATCATCCGAGATGGGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CCA 90 bp TCTGGCAGACACTGTGGAAGCCCACGCCTTATCTTTAGAAAGTCCATTGTATGCGGGCAGCTGCGGCAGTaGGGTGTGCAAGCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: SGRHCGSPRLIFRKSIVCGQLRQ*GVQAGS
Trigger: GCTGCCAGCTTGCACACCCCACTGCCGCAGCTGCCC...GCATACAATGGACTTTCTAAAGATAAGGCGTGGGCTTCCACAGTGTCTGCCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CCA 90 bp CTGTTTAACACACTATGTCAAATACCAGCTTCCCCCGAAAACTGGAGATGCGTCAGTGGGAACACCGGCTaGGGGCAGCCTCCCGGGCAG +
Preference number: 4 (lower is better)
Translates to: LFNTLCQIPASPENWRCVSGNTG*GQPPGQ
Trigger: CTGCCCGGGAGGCTGCCCCCAGCCGGTGTTCCCACT...GACGCATCTCCAGTTTTCGGGGGAAGCTGGTATTTGACATAGTGTGTTAAACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CCA 90 bp GCTGTCGTAAGTCCACAAGGAAGAGTTGACTGGGCCCACCGCTATAGCCAATACGCACCTTTCCAGGTGTaGGAACGTGGAGGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: AVVSPQGRVDWAHRYSQYAPFQV*ERGGPA
Trigger: AGCTGGCCCTCCACGTTCCCACACCTGGAAAGGTGC...GTATTGGCTATAGCGGTGGGCCCAGTCAACTCTTCCTTGTGGACTTACGACAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CCA 90 bp AACCCATCTCGGATGATTGACTTTAGACAGGCCTTCCCCTCTGCGAAGACCACGATGGCCTTCTGCTGCTaGACGGCCTGCTGCTTCAGC +
Preference number: 4 (lower is better)
Translates to: NPSRMIDFRQAFPSAKTTMAFCC*TACCFS
Trigger: GCTGAAGCAGCAGGCCGTCCAGCAGCAGAAGGCCAT...CGTGGTCTTCGCAGAGGGGAAGGCCTGTCTAAAGTCAATCATCCGAGATGGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CCA 90 bp TCTGGCAGACACTGTGGAAGCCCACGCCTTATCTTTAGAAAGTCCATTGTATGCTTGGGCTGTCGGAGCTaGCGGGCACCTGGGCTGGGT +
Preference number: 4 (lower is better)
Translates to: SGRHCGSPRLIFRKSIVCLGCRS*RAPGLG
Trigger: ACCCAGCCCAGGTGCCCGCCAGCTCCGACAGCCCAA...GCATACAATGGACTTTCTAAAGATAAGGCGTGGGCTTCCACAGTGTCTGCCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CCA 90 bp TGGGGGAGGCCACTGTTGGCTGCTCTTTGGAATAACAATGCAATGACTGATCATCTTGGGCTGCTGGCTTaGGCTGTCGGAGCTGGCGGG +
Preference number: 4 (lower is better)
Translates to: WGRPLLAALWNNNAMTDHLGLLA*AVGAGG
Trigger: CCCGCCAGCTCCGACAGCCCAAGCCAGCAGCCCAAG...ATGATCAGTCATTGCATTGTTATTCCAAAGAGCAGCCAACAGTGGCCTCCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CCA 90 bp CCTCATCGTACCCTCAGCTGTGACATCTGTACTACCATTGCCTCTGCGTGGTCCCTGTCACATTCGTCCTaGCTCACTGAGCCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: PHRTLSCDICTTIASAWSLSHSS*LTEPRP
Trigger: AGGCCTGGGCTCAGTGAGCCAGGACGAATGTGACAG...GGACCACGCAGAGGCAATGGTAGTACAGATGTCACAGCTGAGGGTACGATGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CCA 90 bp TCCCAGGGTCGCCAATTAGAGTCTGACAGTGTTCGGGCTGCTGCCTTTATAGTCGGGCCTGGAGATCCCTaGGACCAGGAAGTGCACCAT +
Preference number: 4 (lower is better)
Translates to: SQGRQLESDSVRAAAFIVGPGDP*DQEVHH
Trigger: ATGGTGCACTTCCTGGTCCCAGGGATCTCCAGGCCC...GACTATAAAGGCAGCAGCCCGAACACTGTCAGACTCTAATTGGCGACCCTGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CCA 90 bp GCTGTCGTAAGTCCACAAGGAAGAGTTGACTGGGCCCACCGCTATAGCCAATACGGTGTCGTGGAGCACTaGCGGAAGCCTGAGAGGTCT +
Preference number: 4 (lower is better)
Translates to: AVVSPQGRVDWAHRYSQYGVVEH*RKPERS
Trigger: AGACCTCTCAGGCTTCCGCCAGTGCTCCACGACACC...GTATTGGCTATAGCGGTGGGCCCAGTCAACTCTTCCTTGTGGACTTACGACAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CCA 90 bp AGGTGGTTCTCTGCTTCACTGGCAGAACCACACAAGCTTATCCTAGAGAAAATCGGGCTGGACAGCTGGTaGCCCTGCTGGCGGCTGGCT +
Preference number: 4 (lower is better)
Translates to: RWFSASLAEPHKLILEKIGLDSW*PCWRLA
Trigger: AGCCAGCCGCCAGCAGGGCCACCAGCTGTCCAGCCC...GATTTTCTCTAGGATAAGCTTGTGTGGTTCTGCCAGTGAAGCAGAGAACCACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CCA 90 bp CTGTTTAACACACTATGTCAAATACCAGCTTCCCCCGAAAACTGGAGATGCGTCGGGCTGCGCCTTCGCTaGGGCCTGCACAGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: LFNTLCQIPASPENWRCVGLRLR*GLHRLW
Trigger: CCACAGCCTGTGCAGGCCCCAGCGAAGGCGCAGCCC...GACGCATCTCCAGTTTTCGGGGGAAGCTGGTATTTGACATAGTGTGTTAAACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CCA 90 bp ACGCCTTCCACAACAGCACAGGTGGTTCTCTGCTTCACTGGCAGAACCACACAACCTGAGTCGTTGCCATaGACACCAGGTCAGGGGTCG +
Preference number: 4 (lower is better)
Translates to: TPSTTAQVVLCFTGRTTQPESLP*TPGQGS
Trigger: CGACCCCTGACCTGGTGTCCATGGCAACGACTCAGG...TTGTGTGGTTCTGCCAGTGAAGCAGAGAACCACCTGTGCTGTTGTGGAAGGCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR TCA 90 bp TATGCTCCTCACACACGGCAGACGGCTTCTGTGGCGTGCAAAGCACTACATGCTGACGAGGTGGCATTCTaGGCAGGACTCTGTGGTTTG +
Preference number: 4 (lower is better)
Translates to: YAPHTRQTASVACKALHADEVAF*AGLCGL
Trigger: CAAACCACAGAGTCCTGCTCAGAATGCCACCTCGTC...AGCATGTAGTGCTTTGCACGCCACAGAAGCCGTCTGCCGTGTGTGAGGAGCATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR TCA 90 bp TATGCTCCTCACACACGGCAGACGGCTTCTGTGGCGTGCAAAGCACTACATGCTAAAACTACCCCTTGGTaGCCCACTTCAAGGCGAGGC +
Preference number: 4 (lower is better)
Translates to: YAPHTRQTASVACKALHAKTTPW*PTSRRG
Trigger: GCCTCGCCTTGAAGTGGGTCACCAAGGGGTAGTTTT...AGCATGTAGTGCTTTGCACGCCACAGAAGCCGTCTGCCGTGTGTGAGGAGCATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR TCA 90 bp TCTGGCAGACACTGTGGAAGCCCACGCCTTATCTTTAGAAAGTCCATTGTATGCGACCGATCGCCACGCTaGTCCCCGCGACGTTCATGG +
Preference number: 4 (lower is better)
Translates to: SGRHCGSPRLIFRKSIVCDRSPR*SPRRSW
Trigger: CCATGAACGTCGCGGGGATCAGCGTGGCGATCGGTC...GCATACAATGGACTTTCTAAAGATAAGGCGTGGGCTTCCACAGTGTCTGCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR TCA 90 bp CTGATCATTTCCCTTGAACACAGGCCAGGAACGTGCCTTGTGTGTTTAGGTGGGCCTTCGTCAAAGGGCTaGCTGTGGCAGCAAGGGGTG +
Preference number: 4 (lower is better)
Translates to: LIISLEHRPGTCLVCLGGPSSKG*LWQQGV
Trigger: CACCCCTTGCTGCCACAGTCAGCCCTTTGACGAAGG...CCCACCTAAACACACAAGGCACGTTCCTGGCCTGTGTTCAAGGGAAATGATCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR TCA 90 bp CTGATCATTTCCCTTGAACACAGGCCAGGAACGTGCCTTGTGTGTTTAGGTGGGGGGTCCAGAGCGGCATaGCTTCTGTCTGCCCATCGA +
Preference number: 4 (lower is better)
Translates to: LIISLEHRPGTCLVCLGGGSRAA*LLSAHR
Trigger: TCGATGGGCAGACAGAAGTCATGCCGCTCTGGACCC...CCCACCTAAACACACAAGGCACGTTCCTGGCCTGTGTTCAAGGGAAATGATCAG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR GCA 90 bp ACGCCTTCCACAACAGCACAGGTGGTTCTCTGCTTCACTGGCAGAACCACACAAGGGCCAGTGCCATGGTaGATGATCACCTCCCTTCTG +
Preference number: 4 (lower is better)
Translates to: TPSTTAQVVLCFTGRTTQGPVPW*MITSLL
Trigger: CAGAAGGGAGGTGATCATGCACCATGGCACTGGCCC...TTGTGTGGTTCTGCCAGTGAAGCAGAGAACCACCTGTGCTGTTGTGGAAGGCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR GCA 90 bp TCCATTGTATGCTCCTCACACACGGCAGACGGCTTCTGTGGCGTGCAAAGCACTGGCTGCGGGGGCATCTaGAGTTTCTGCTTCTGCATT +
Preference number: 4 (lower is better)
Translates to: SIVCSSHTADGFCGVQSTGCGGI*SFCFCI
Trigger: AATGCAGAAGCAGAAACTGCAGATGCCCCCGCAGCC...AGTGCTTTGCACGCCACAGAAGCCGTCTGCCGTGTGTGAGGAGCATACAATGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR GCA 90 bp AACCCATCTCGGATGATTGACTTTAGACAGGCCTTCCCCTCTGCGAAGACCACGTGCGAGGTCTGCACTTaGACTTGGGCTGTTGGCTGC +
Preference number: 4 (lower is better)
Translates to: NPSRMIDFRQAFPSAKTTCEVCT*TWAVGC
Trigger: GCAGCCAACAGCCCAAGTGCAAGTGCAGACCTCGCA...CGTGGTCTTCGCAGAGGGGAAGGCCTGTCTAAAGTCAATCATCCGAGATGGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR GCA 90 bp TCTGGCAGACACTGTGGAAGCCCACGCCTTATCTTTAGAAAGTCCATTGTATGCAGCAGCTGCTGCATGTaGACGGGCTGGGCCACCACG +
Preference number: 4 (lower is better)
Translates to: SGRHCGSPRLIFRKSIVCSSCCM*TGWATT
Trigger: CGTGGTGGCCCAGCCCGTGCACATGCAGCAGCTGCT...GCATACAATGGACTTTCTAAAGATAAGGCGTGGGCTTCCACAGTGTCTGCCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR GCA 90 bp ACGCCTTCCACAACAGCACAGGTGGTTCTCTGCTTCACTGGCAGAACCACACAACCAGGGGTGGTGATCTaGTGTGCGGTGATCTTCTGC +
Preference number: 4 (lower is better)
Translates to: TPSTTAQVVLCFTGRTTQPGVVI*CAVIFC
Trigger: GCAGAAGATCACCGCACAGCAGATCACCACCCCTGG...TTGTGTGGTTCTGCCAGTGAAGCAGAGAACCACCTGTGCTGTTGTGGAAGGCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR GCA 90 bp TGGGGGAGGCCACTGTTGGCTGCTCTTTGGAATAACAATGCAATGACTGATCATACCTGGATCTGGGTCTaGACTTGCTGGGCCCCGGCC +
Preference number: 4 (lower is better)
Translates to: WGRPLLAALWNNNAMTDHTWIWV*TCWAPA
Trigger: GGCCGGGGCCCAGCAAGTGCAGACCCAGATCCAGGT...ATGATCAGTCATTGCATTGTTATTCCAAAGAGCAGCCAACAGTGGCCTCCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR GCA 90 bp AACCCATCTCGGATGATTGACTTTAGACAGGCCTTCCCCTCTGCGAAGACCACGGAAGCAGAGGCAACTTaGTGGATGCTGGCCACGGGT +
Preference number: 4 (lower is better)
Translates to: NPSRMIDFRQAFPSAKTTEAEAT*WMLATG
Trigger: ACCCGTGGCCAGCATCCAGCAAGTTGCCTCTGCTTC...CGTGGTCTTCGCAGAGGGGAAGGCCTGTCTAAAGTCAATCATCCGAGATGGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR GCA 90 bp TCCATTGTATGCTCCTCACACACGGCAGACGGCTTCTGTGGCGTGCAAAGCACTACAGGCCTTCCCCTCTaGGAAGACCACGAGGCATTT +
Preference number: 4 (lower is better)
Translates to: SIVCSSHTADGFCGVQSTTGLPL*EDHEAF
Trigger: AAATGCCTCGTGGTCTTCGCAGAGGGGAAGGCCTGT...AGTGCTTTGCACGCCACAGAAGCCGTCTGCCGTGTGTGAGGAGCATACAATGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR GCA 90 bp TCTGGCAGACACTGTGGAAGCCCACGCCTTATCTTTAGAAAGTCCATTGTATGCCGCTCTCACGGCACGTaGCAAGCCAGGGAGAACGGG +
Preference number: 4 (lower is better)
Translates to: SGRHCGSPRLIFRKSIVCRSHGT*QARENG
Trigger: CCCGTTCTCCCTGGCTTGGCACGTGCCGTGAGAGCG...GCATACAATGGACTTTCTAAAGATAAGGCGTGGGCTTCCACAGTGTCTGCCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR GCA 90 bp TGGGGGAGGCCACTGTTGGCTGCTCTTTGGAATAACAATGCAATGACTGATCATCGAGCCCAGGGTGGTTaGAGATGCGCTGCAGCCGCA +
Preference number: 4 (lower is better)
Translates to: WGRPLLAALWNNNAMTDHRAQGG*RCAAAA
Trigger: TGCGGCTGCAGCGCATCTGCAACCACCCTGGGCTCG...ATGATCAGTCATTGCATTGTTATTCCAAAGAGCAGCCAACAGTGGCCTCCCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR GCA 90 bp CTGATCATTTCCCTTGAACACAGGCCAGGAACGTGCCTTGTGTGTTTAGGTGGGCTCTGCACGGAGAGATaGCACCTGGATGGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: LIISLEHRPGTCLVCLGGLCTER*HLDGRQ
Trigger: CTGCCTCCCATCCAGGTGGCATCTCTCCGTGCAGAG...CCCACCTAAACACACAAGGCACGTTCCTGGCCTGTGTTCAAGGGAAATGATCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CCA 90 bp AACCCATCTCGGATGATTGACTTTAGACAGGCCTTCCCCTCTGCGAAGACCACGTGGGGGCCAGTGCCATaGTGCATGATCACCTCCCTT +
Preference number: 4 (lower is better)
Translates to: NPSRMIDFRQAFPSAKTTWGPVP*CMITSL
Trigger: AAGGGAGGTGATCATGCACCATGGCACTGGCCCCCA...CGTGGTCTTCGCAGAGGGGAAGGCCTGTCTAAAGTCAATCATCCGAGATGGGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CCA 90 bp CTGATCATTTCCCTTGAACACAGGCCAGGAACGTGCCTTGTGTGTTTAGGTGGGTGGGCGGTGCAGGGATaGGAACATTGGGCTGCTGAG +
Preference number: 4 (lower is better)
Translates to: LIISLEHRPGTCLVCLGGWAVQG*EHWAAE
Trigger: CTCAGCAGCCCAATGTTCCCATCCCTGCACCGCCCA...CCCACCTAAACACACAAGGCACGTTCCTGGCCTGTGTTCAAGGGAAATGATCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CCA 90 bp CTGTTTAACACACTATGTCAAATACCAGCTTCCCCCGAAAACTGGAGATGCGTCGCTGCGAGGGAGGGATaGGGAGTTGGCTGCTGGGCG +
Preference number: 4 (lower is better)
Translates to: LFNTLCQIPASPENWRCVAAREG*GVGCWA
Trigger: CGCCCAGCAGCCAACTCCCCATCCCTCCCTCGCAGC...GACGCATCTCCAGTTTTCGGGGGAAGCTGGTATTTGACATAGTGTGTTAAACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CCA 90 bp AGGTGGTTCTCTGCTTCACTGGCAGAACCACACAAGCTTATCCTAGAGAAAATCTTCGCCAAGGCCACCTaGGCTGGCTGGGGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: RWFSASLAEPHKLILEKIFAKAT*AGWGAW
Trigger: CCAGGCACCCCAGCCAGCCCAGGTGGCCTTGGCGAA...GATTTTCTCTAGGATAAGCTTGTGTGGTTCTGCCAGTGAAGCAGAGAACCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CCA 90 bp TGTGACATCTGTACTACCATTGCCTCTGCGTGGTCCTCTGGGCCTCACGCCAGCGGAAGTTTTGCAACCTaGATCTGGGTCTGCACTTGC +
Preference number: 4 (lower is better)
Translates to: CDICTTIASAWSSGPHASGSFAT*IWVCTC
Trigger: GCAAGTGCAGACCCAGATCCAGGTTGCAAAACTTCC...GCTGGCGTGAGGCCCAGAGGACCACGCAGAGGCAATGGTAGTACAGATGTCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CCA 90 bp TTTCCAACTCTTACTTGCCGTATTGGAATGAACCCAGATTCACAAGGGGAAGGCGCGGGGCCGACGCCGTaGTCACCACCTGCTGCTGAA +
Preference number: 4 (lower is better)
Translates to: FPTLTCRIGMNPDSQGEGAGPTP*SPPAAE
Trigger: TTCAGCAGCAGGTGGTGACCACGGCGTCGGCCCCGC...GCCTTCCCCTTGTGAATCTGGGTTCATTCCAATACGGCAAGTAAGAGTTGGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CCA 90 bp CTGTTTAACACACTATGTCAAATACCAGCTTCCCCCGAAAACTGGAGATGCGTCTGGGTTGGGAGCGCCTaGAGTCTGGAGCGGGGCCGA +
Preference number: 4 (lower is better)
Translates to: LFNTLCQIPASPENWRCVWVGSA*SLERGR
Trigger: TCGGCCCCGCTCCAGACTCCAGGCGCTCCCAACCCA...GACGCATCTCCAGTTTTCGGGGGAAGCTGGTATTTGACATAGTGTGTTAAACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CCA 90 bp CTGTTTAACACACTATGTCAAATACCAGCTTCCCCCGAAAACTGGAGATGCGTCTTGGGCTGTCGGAGCTaGCGGGCACCTGGGCTGGGT +
Preference number: 4 (lower is better)
Translates to: LFNTLCQIPASPENWRCVLGCRS*RAPGLG
Trigger: ACCCAGCCCAGGTGCCCGCCAGCTCCGACAGCCCAA...GACGCATCTCCAGTTTTCGGGGGAAGCTGGTATTTGACATAGTGTGTTAAACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CCA 90 bp TTTCCAACTCTTACTTGCCGTATTGGAATGAACCCAGATTCACAAGGGGAAGGCCTTGGGCTGCTGGCTTaGGCTGTCGGAGCTGGCGGG +
Preference number: 4 (lower is better)
Translates to: FPTLTCRIGMNPDSQGEGLGLLA*AVGAGG
Trigger: CCCGCCAGCTCCGACAGCCCAAGCCAGCAGCCCAAG...GCCTTCCCCTTGTGAATCTGGGTTCATTCCAATACGGCAAGTAAGAGTTGGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CCA 90 bp AACCCATCTCGGATGATTGACTTTAGACAGGCCTTCCCCTCTGCGAAGACCACGTGTAACTTGGGCTGCTaGCTTGGGCTGTCGGAGCTG +
Preference number: 4 (lower is better)
Translates to: NPSRMIDFRQAFPSAKTTCNLGC*LGLSEL
Trigger: CAGCTCCGACAGCCCAAGCCAGCAGCCCAAGTTACA...CGTGGTCTTCGCAGAGGGGAAGGCCTGTCTAAAGTCAATCATCCGAGATGGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CCA 90 bp GCTGTCGTAAGTCCACAAGGAAGAGTTGACTGGGCCCACCGCTATAGCCAATACGCCTCACGCCAGCCATaGCAGAGTGTCCCAAAGGTT +
Preference number: 4 (lower is better)
Translates to: AVVSPQGRVDWAHRYSQYASRQP*QSVPKV
Trigger: AACCTTTGGGACACTCTGCCATGGCTGGCGTGAGGC...GTATTGGCTATAGCGGTGGGCCCAGTCAACTCTTCCTTGTGGACTTACGACAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CCA 90 bp TCTGGCAGACACTGTGGAAGCCCACGCCTTATCTTTAGAAAGTCCATTGTATGCTCGAAGCGGGCCCTGTaGAGCAGCAGAGGCCGTGGT +
Preference number: 4 (lower is better)
Translates to: SGRHCGSPRLIFRKSIVCSKRAL*SSRGRG
Trigger: ACCACGGCCTCTGCTGCTCCACAGGGCCCGCTTCGA...GCATACAATGGACTTTCTAAAGATAAGGCGTGGGCTTCCACAGTGTCTGCCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CCA 90 bp AGGTGGTTCTCTGCTTCACTGGCAGAACCACACAAGCTTATCCTAGAGAAAATCGGCGGGCTGGTGTCGTaGAGCACTGGCGGAAGCCTG +
Preference number: 4 (lower is better)
Translates to: RWFSASLAEPHKLILEKIGGLVS*STGGSL
Trigger: CAGGCTTCCGCCAGTGCTCCACGACACCAGCCCGCC...GATTTTCTCTAGGATAAGCTTGTGTGGTTCTGCCAGTGAAGCAGAGAACCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CCA 90 bp CAGCACAGGTGGTTCTCTGCTTCACTGGCAGAACCACACAAGCTTATCCTAGAGAGCCACGCGGCTCTGTaGTCCTGTGATGGATGCCAG +
Preference number: 4 (lower is better)
Translates to: QHRWFSASLAEPHKLILESHAAL*SCDGCQ
Trigger: CTGGCATCCATCACAGGACCACAGAGCCGCGTGGCT...CTCTAGGATAAGCTTGTGTGGTTCTGCCAGTGAAGCAGAGAACCACCTGTGCTG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CCA 90 bp ATTATATCTTTCCCAGTGCTGAATCTCTTGCGTGACATGGTCCCAAGGTTCACTTGCAGCTGCAGCGGCTaGCCCGCTGTGAGCTGCCGG +
Preference number: 4 (lower is better)
Translates to: IISFPVLNLLRDMVPRFTCSCSG*PAVSCR
Trigger: CCGGCAGCTCACAGCGGGCCAGCCGCTGCAGCTGCA...AGTGAACCTTGGGACCATGTCACGCAAGAGATTCAGCACTGGGAAAGATATAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CCA 90 bp AACACACTATGTCAAATACCAGCTTCCCCCGAAAACTGGAGATGCGTCTTGAGTGCAGGCGTGGAGCCGTaGTCTGCCGCAGCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: NTLCQIPASPENWRCVLSAGVEP*SAAAAG
Trigger: TCCAGCAGCTGCGGCAGACCACGGCTCCACGCCTGC...ACTCAAGACGCATCTCCAGTTTTCGGGGGAAGCTGGTATTTGACATAGTGTGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CCA 90 bp AACACACTATGTCAAATACCAGCTTCCCCCGAAAACTGGAGATGCGTCTTGAGTTTGGGGCTGGACAGCTaGTGGCCCTGCTGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: NTLCQIPASPENWRCVLSLGLDS*WPCWRL
Trigger: CAGCCGCCAGCAGGGCCACCAGCTGTCCAGCCCCAA...ACTCAAGACGCATCTCCAGTTTTCGGGGGAAGCTGGTATTTGACATAGTGTGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389561.7
3UTR CAA 72 bp CGCTCTCACGGCACGTGCCAAGCCAGGGAGAACGGGTaGGTTAGAACAAACAGATTCCAGTCCTCTGCTTTG +
Preference number: 4 (lower is better)
Translates to: RSHGTCQARENG*VRTNRFQSSAL
Trigger: CAAAGCAGAGGACTGGAATCTGTTTGTTCTAACCAACCCGTTCTCCCTGGCTTGGCACGTGCCGTGAGAGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR TCA 90 bp ATTATATCTTTCCCAGTGCTGAATCTCTTGCGTGACATGGTCCCAAGGTTCACTGGTGGTGACTCCCGGTaGGGAGACCACAGCTGCCGG +
Preference number: 4 (lower is better)
Translates to: IISFPVLNLLRDMVPRFTGGDSR*GDHSCR
Trigger: CCGGCAGCTGTGGTCTCCTCACCGGGAGTCACCACC...AGTGAACCTTGGGACCATGTCACGCAAGAGATTCAGCACTGGGAAAGATATAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR TCA 90 bp AGGTGGTTCTCTGCTTCACTGGCAGAACCACACAAGCTTATCCTAGAGAAAATCGACCGATCGCCACGCTaGTCCCCGCGACGTTCATGG +
Preference number: 4 (lower is better)
Translates to: RWFSASLAEPHKLILEKIDRSPR*SPRRSW
Trigger: CCATGAACGTCGCGGGGATCAGCGTGGCGATCGGTC...GATTTTCTCTAGGATAAGCTTGTGTGGTTCTGCCAGTGAAGCAGAGAACCACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR TCA 90 bp AGGTGGTTCTCTGCTTCACTGGCAGAACCACACAAGCTTATCCTAGAGAAAATCACTGGGAGCCAGATGTaGGGCGCACACAGCGGCCCT +
Preference number: 4 (lower is better)
Translates to: RWFSASLAEPHKLILEKITGSQM*GAHSGP
Trigger: AGGGCCGCTGTGTGCGCCTCACATCTGGCTCCCAGT...GATTTTCTCTAGGATAAGCTTGTGTGGTTCTGCCAGTGAAGCAGAGAACCACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR TCA 90 bp AACCCATCTCGGATGATTGACTTTAGACAGGCCTTCCCCTCTGCGAAGACCACGTGCCAAGCAGAGGTTTaGTTGGGGGACTCCTCTTGC +
Preference number: 4 (lower is better)
Translates to: NPSRMIDFRQAFPSAKTTCQAEV*LGDSSC
Trigger: GCAAGAGGAGTCCCCCAATCAAACCTCTGCTTGGCA...CGTGGTCTTCGCAGAGGGGAAGGCCTGTCTAAAGTCAATCATCCGAGATGGGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR GCA 90 bp TCCCAGGGTCGCCAATTAGAGTCTGACAGTGTTCGGGCTGCTGCCTTTATAGTCGGCTGCGGGGGCATCTaGAGTTTCTGCTTCTGCATT +
Preference number: 4 (lower is better)
Translates to: SQGRQLESDSVRAAAFIVGCGGI*SFCFCI
Trigger: AATGCAGAAGCAGAAACTGCAGATGCCCCCGCAGCC...GACTATAAAGGCAGCAGCCCGAACACTGTCAGACTCTAATTGGCGACCCTGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR GCA 90 bp CGTGACATGGTCCCAAGGTTCACTAATAAAGCGTTTTCTGTGAGGAAGGTAGTTGGTTGGCCACGGTGGTaGCCGTCAGCAGGGCACCAG +
Preference number: 4 (lower is better)
Translates to: RDMVPRFTNKAFSVRKVVGWPRW*PSAGHQ
Trigger: CTGGTGCCCTGCTGACGGGCACCACCGTGGCCAACC...AACTACCTTCCTCACAGAAAACGCTTTATTAGTGAACCTTGGGACCATGTCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR GCA 90 bp GCTGTCGTAAGTCCACAAGGAAGAGTTGACTGGGCCCACCGCTATAGCCAATACGGTGGTGATCTGCTGTaGGGTGATCTTCTGCTGGAC +
Preference number: 4 (lower is better)
Translates to: AVVSPQGRVDWAHRYSQYGGDLL*GDLLLD
Trigger: GTCCAGCAGAAGATCACCGCACAGCAGATCACCACC...GTATTGGCTATAGCGGTGGGCCCAGTCAACTCTTCCTTGTGGACTTACGACAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR GCA 90 bp CAGCACAGGTGGTTCTCTGCTTCACTGGCAGAACCACACAAGCTTATCCTAGAGCCAGGGGTGGTGATCTaGTGTGCGGTGATCTTCTGC +
Preference number: 4 (lower is better)
Translates to: QHRWFSASLAEPHKLILEPGVVI*CAVIFC
Trigger: GCAGAAGATCACCGCACAGCAGATCACCACCCCTGG...CTCTAGGATAAGCTTGTGTGGTTCTGCCAGTGAAGCAGAGAACCACCTGTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR GCA 90 bp GCTGTCGTAAGTCCACAAGGAAGAGTTGACTGGGCCCACCGCTATAGCCAATACCACAGGCCAGGAACGTaGCTTGTGTGTTTAGGTGGG +
Preference number: 4 (lower is better)
Translates to: AVVSPQGRVDWAHRYSQYHRPGT*LVCLGG
Trigger: CCCACCTAAACACACAAGGCACGTTCCTGGCCTGTG...GTATTGGCTATAGCGGTGGGCCCAGTCAACTCTTCCTTGTGGACTTACGACAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR GCA 90 bp CCTCATCGTACCCTCAGCTGTGACATCTGTACTACCATTGCCTCTGCGTGGTCCTCCAGGAAGGTATTGTaGAGCGGCGAGTCGATCAGA +
Preference number: 4 (lower is better)
Translates to: PHRTLSCDICTTIASAWSSRKVL*SGESIR
Trigger: TCTGATCGACTCGCCGCTGCACAATACCTTCCTGGA...GGACCACGCAGAGGCAATGGTAGTACAGATGTCACAGCTGAGGGTACGATGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR GCA 90 bp CTGTTTAACACACTATGTCAAATACCAGCTTCCCCCGAAAACTGGAGATGCGTCTGGCCCGCTGTGAGCTaGCGGAGCTGGCTGTGTGAC +
Preference number: 4 (lower is better)
Translates to: LFNTLCQIPASPENWRCVWPAVS*RSWLCD
Trigger: GTCACACAGCCAGCTCCGGCAGCTCACAGCGGGCCA...GACGCATCTCCAGTTTTCGGGGGAAGCTGGTATTTGACATAGTGTGTTAAACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR GCA 90 bp TCTCCACATTTCTTATCAAGAGCTCAAGTGAGCTCCCCAGTTGATTTCACTGACTGGAGGACGCTGCCTTaGAGCTGCAGCGGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: SPHFLSRAQVSSPVDFTDWRTLP*SCSGWP
Trigger: GGGCCAGCCGCTGCAGCTGCAAGGCAGCGTCCTCCA...GTCAGTGAAATCAACTGGGGAGCTCACTTGAGCTCTTGATAAGAAATGTGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR GCA 90 bp ATTATATCTTTCCCAGTGCTGAATCTCTTGCGTGACATGGTCCCAAGGTTCACTCTGCTGGCGGCTGGCTaGCCGCTGCCTGTGGTTGTG +
Preference number: 4 (lower is better)
Translates to: IISFPVLNLLRDMVPRFTLLAAG*PLPVVV
Trigger: CACAACCACAGGCAGCGGGCAGCCAGCCGCCAGCAG...AGTGAACCTTGGGACCATGTCACGCAAGAGATTCAGCACTGGGAAAGATATAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR GCA 90 bp AGGTGGTTCTCTGCTTCACTGGCAGAACCACACAAGCTTATCCTAGAGAAAATCGGGCACCAAAGACCGTaGCGGGGTCTGCACTGGGGT +
Preference number: 4 (lower is better)
Translates to: RWFSASLAEPHKLILEKIGHQRP*RGLHWG
Trigger: ACCCCAGTGCAGACCCCGGCACGGTCTTTGGTGCCC...GATTTTCTCTAGGATAAGCTTGTGTGGTTCTGCCAGTGAAGCAGAGAACCACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CCA 90 bp TTTCCAACTCTTACTTGCCGTATTGGAATGAACCCAGATTCACAAGGGGAAGGCAGGAGAGGGCTGCAGTaGGAACACCGGCTGGGGGCA +
Preference number: 4 (lower is better)
Translates to: FPTLTCRIGMNPDSQGEGRRGLQ*EHRLGA
Trigger: TGCCCCCAGCCGGTGTTCCCACTGCAGCCCTCTCCT...GCCTTCCCCTTGTGAATCTGGGTTCATTCCAATACGGCAAGTAAGAGTTGGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CCA 90 bp CAGCACAGGTGGTTCTCTGCTTCACTGGCAGAACCACACAAGCTTATCCTAGAGGTCGGCATTAGTTGCTaGAGAGGAACGCCTGCGTCC +
Preference number: 4 (lower is better)
Translates to: QHRWFSASLAEPHKLILEVGISC*RGTPAS
Trigger: GGACGCAGGCGTTCCTCTCCAGCAACTAATGCCGAC...CTCTAGGATAAGCTTGTGTGGTTCTGCCAGTGAAGCAGAGAACCACCTGTGCTG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CCA 90 bp AACCCATCTCGGATGATTGACTTTAGACAGGCCTTCCCCTCTGCGAAGACCACGGGTGTGGTAAGAAACTaGGTCTTAAGGGCCGGCTGC +
Preference number: 4 (lower is better)
Translates to: NPSRMIDFRQAFPSAKTTGVVRN*VLRAGC
Trigger: GCAGCCGGCCCTTAAGACCCAGTTTCTTACCACACC...CGTGGTCTTCGCAGAGGGGAAGGCCTGTCTAAAGTCAATCATCCGAGATGGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CCA 90 bp AACCCATCTCGGATGATTGACTTTAGACAGGCCTTCCCCTCTGCGAAGACCACGTGTGGAGAAGCCTGCTaGGAAGCAGAGGCAACTTGC +
Preference number: 4 (lower is better)
Translates to: NPSRMIDFRQAFPSAKTTCGEAC*EAEATC
Trigger: GCAAGTTGCCTCTGCTTCCCAGCAGGCTTCTCCACA...CGTGGTCTTCGCAGAGGGGAAGGCCTGTCTAAAGTCAATCATCCGAGATGGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CCA 90 bp TACTTTTCTCCACATTTCTTATCAAGAGCTCAAGTGAGCTCCCCAGTTGATTTCGGAGCGCCTGGAGTCTaGAGCGGGGCCGACGCCGTG +
Preference number: 4 (lower is better)
Translates to: YFSPHFLSRAQVSSPVDFGAPGV*SGADAV
Trigger: CACGGCGTCGGCCCCGCTCCAGACTCCAGGCGCTCC...GAAATCAACTGGGGAGCTCACTTGAGCTCTTGATAAGAAATGTGGAGAAAAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CCA 90 bp AGAGGAAGCCATGTTGTCACTTTTTCCATGAGCCACGTAGTACAGAGAACGCGGGGGGACGGGTGCGGGTaGGGACTGAAAGGTGAAATG +
Preference number: 4 (lower is better)
Translates to: RGSHVVTFSMSHVVQRTRGDGCG*GLKGEM
Trigger: CATTTCACCTTTCAGTCCCCACCCGCACCCGTCCCC...CCGCGTTCTCTGTACTACGTGGCTCATGGAAAAAGTGACAACATGGCTTCCTCT
54% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CCA 90 bp AACACACTATGTCAAATACCAGCTTCCCCCGAAAACTGGAGATGCGTCTTGAGTCTCTGCGTGGTCCTCTaGGCCTCACGCCAGCCATGG +
Preference number: 4 (lower is better)
Translates to: NTLCQIPASPENWRCVLSLCVVL*ASRQPW
Trigger: CCATGGCTGGCGTGAGGCCCAGAGGACCACGCAGAG...ACTCAAGACGCATCTCCAGTTTTCGGGGGAAGCTGGTATTTGACATAGTGTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CCA 90 bp TCCATTGTATGCTCCTCACACACGGCAGACGGCTTCTGTGGCGTGCAAAGCACTCCACAACAGCACAGGTaGTTCTCTGCTTCACTGGCA +
Preference number: 4 (lower is better)
Translates to: SIVCSSHTADGFCGVQSTPQQHR*FSASLA
Trigger: TGCCAGTGAAGCAGAGAACCACCTGTGCTGTTGTGG...AGTGCTTTGCACGCCACAGAAGCCGTCTGCCGTGTGTGAGGAGCATACAATGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CCA 90 bp CCTCATCGTACCCTCAGCTGTGACATCTGTACTACCATTGCCTCTGCGTGGTCCCGTCCGCAATGTCCTTaGCGTTTGGCTTCCCGATAT +
Preference number: 4 (lower is better)
Translates to: PHRTLSCDICTTIASAWSRPQCP*RLASRY
Trigger: ATATCGGGAAGCCAAACGCCAAGGACATTGCGGACG...GGACCACGCAGAGGCAATGGTAGTACAGATGTCACAGCTGAGGGTACGATGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CCA 90 bp CTGATCATTTCCCTTGAACACAGGCCAGGAACGTGCCTTGTGTGTTTAGGTGGGAGACGTGGAAGCTGTTaGGTTCGGCCCACTCCTGTC +
Preference number: 4 (lower is better)
Translates to: LIISLEHRPGTCLVCLGGRRGSC*VRPTPV
Trigger: GACAGGAGTGGGCCGAACCCAACAGCTTCCACGTCT...CCCACCTAAACACACAAGGCACGTTCCTGGCCTGTGTTCAAGGGAAATGATCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CCA 90 bp TCTCCACATTTCTTATCAAGAGCTCAAGTGAGCTCCCCAGTTGATTTCACTGACGGGGCGGGTGAGTGCTaGGGAAAGCCACGGTGCGAC +
Preference number: 4 (lower is better)
Translates to: SPHFLSRAQVSSPVDFTDGAGEC*GKPRCD
Trigger: GTCGCACCGTGGCTTTCCCCAGCACTCACCCGCCCC...GTCAGTGAAATCAACTGGGGAGCTCACTTGAGCTCTTGATAAGAAATGTGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CCA 90 bp TTTCCAACTCTTACTTGCCGTATTGGAATGAACCCAGATTCACAAGGGGAAGGCGGGGCGGACACGATCTaGAGGACGCTGCCTTGCAGC +
Preference number: 4 (lower is better)
Translates to: FPTLTCRIGMNPDSQGEGGADTI*RTLPCS
Trigger: GCTGCAAGGCAGCGTCCTCCAGATCGTGTCCGCCCC...GCCTTCCCCTTGTGAATCTGGGTTCATTCCAATACGGCAAGTAAGAGTTGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CCA 90 bp AGAGGAAGCCATGTTGTCACTTTTTCCATGAGCCACGTAGTACAGAGAACGCGGGGGTCGGCCCTCCAATaGGAGAAGCTGGTTTGGAGG +
Preference number: 4 (lower is better)
Translates to: RGSHVVTFSMSHVVQRTRGSALQ*EKLVWR
Trigger: CCTCCAAACCAGCTTCTCCCATTGGAGGGCCGACCC...CCGCGTTCTCTGTACTACGTGGCTCATGGAAAAAGTGACAACATGGCTTCCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CCA 90 bp GCTGTCGTAAGTCCACAAGGAAGAGTTGACTGGGCCCACCGCTATAGCCAATACGGGTTTGGCAAAAGTTaGCAGGGGCTTGGCGAATGG +
Preference number: 4 (lower is better)
Translates to: AVVSPQGRVDWAHRYSQYGFGKS*QGLGEW
Trigger: CCATTCGCCAAGCCCCTGCCAACTTTTGCCAAACCC...GTATTGGCTATAGCGGTGGGCCCAGTCAACTCTTCCTTGTGGACTTACGACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CCA 90 bp TCCATTGTATGCTCCTCACACACGGCAGACGGCTTCTGTGGCGTGCAAAGCACTACAGCTGGGTGTGTGTaGCATTCTCATCCTGGGCAT +
Preference number: 4 (lower is better)
Translates to: SIVCSSHTADGFCGVQSTTAGCV*HSHPGH
Trigger: ATGCCCAGGATGAGAATGCCACACACACCCAGCTGT...AGTGCTTTGCACGCCACAGAAGCCGTCTGCCGTGTGTGAGGAGCATACAATGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CCA 90 bp CCTCATCGTACCCTCAGCTGTGACATCTGTACTACCATTGCCTCTGCGTGGTCCCTGGGACCCCTGCGATaGTGTTCACGATCACATTTC +
Preference number: 4 (lower is better)
Translates to: PHRTLSCDICTTIASAWSLGPLR*CSRSHF
Trigger: GAAATGTGATCGTGAACACCATCGCAGGGGTCCCAG...GGACCACGCAGAGGCAATGGTAGTACAGATGTCACAGCTGAGGGTACGATGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CCA 90 bp CGTGACATGGTCCCAAGGTTCACTAATAAAGCGTTTTCTGTGAGGAAGGTAGTTTGGGTGTGCACCACCTaGGCGGGAGCAGAGCCTCCC +
Preference number: 4 (lower is better)
Translates to: RDMVPRFTNKAFSVRKVVWVCTT*AGAEPP
Trigger: GGGAGGCTCTGCTCCCGCCCAGGTGGTGCACACCCA...AACTACCTTCCTCACAGAAAACGCTTTATTAGTGAACCTTGGGACCATGTCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CCA 90 bp TACTTTTCTCCACATTTCTTATCAAGAGCTCAAGTGAGCTCCCCAGTTGATTTCGGTCAGGGGTCGCCGTaGCTGGGGAGCCGACTGCCC +
Preference number: 4 (lower is better)
Translates to: YFSPHFLSRAQVSSPVDFGQGSP*LGSRLP
Trigger: GGGCAGTCGGCTCCCCAGCCACGGCGACCCCTGACC...GAAATCAACTGGGGAGCTCACTTGAGCTCTTGATAAGAAATGTGGAGAAAAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CCA 90 bp CTATGTCAAATACCAGCTTCCCCCGAAAACTGGAGATGCGTCTTGAGTGCACTGGTGGCTTGGGACACTTaGGGCACCAAAGACCGTGCC +
Preference number: 4 (lower is better)
Translates to: LCQIPASPENWRCVLSALVAWDT*GTKDRA
Trigger: GGCACGGTCTTTGGTGCCCCAAGTGTCCCAAGCCAC...CAGTGCACTCAAGACGCATCTCCAGTTTTCGGGGGAAGCTGGTATTTGACATAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR TCA 90 bp TTTCCAACTCTTACTTGCCGTATTGGAATGAACCCAGATTCACAAGGGGAAGGCTCATGGGCAGGGTGGTaGCTCCCGGTGAGGAGACCA +
Preference number: 4 (lower is better)
Translates to: FPTLTCRIGMNPDSQGEGSWAGW*LPVRRP
Trigger: TGGTCTCCTCACCGGGAGTCACCACCCTGCCCATGA...GCCTTCCCCTTGTGAATCTGGGTTCATTCCAATACGGCAAGTAAGAGTTGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR TCA 90 bp CAAGCCACAGCACAAAGGATACTATTGGATATGGACCTTTTTGCTTTGGTGAAACCGCCGTCGCCTGCGTaGGCGCCACAGTCTGTGGAG +
Preference number: 4 (lower is better)
Translates to: QATAQRILLDMDLFALVKPPSPA*APQSVE
Trigger: CTCCACAGACTGTGGCGCTCACGCAGGCGACGGCGG...TTTCACCAAAGCAAAAAGGTCCATATCCAATAGTATCCTTTGTGCTGTGGCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR TCA 90 bp TCCATTGTATGCTCCTCACACACGGCAGACGGCTTCTGTGGCGTGCAAAGCACTCAAAGGAAACACACTTaGGAGACAGGAGACCCTCAC +
Preference number: 4 (lower is better)
Translates to: SIVCSSHTADGFCGVQSTQRKHT*ETGDPH
Trigger: GTGAGGGTCTCCTGTCTCTCAAGTGTGTTTCCTTTG...AGTGCTTTGCACGCCACAGAAGCCGTCTGCCGTGTGTGAGGAGCATACAATGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR TCA 90 bp TATGCTCCTCACACACGGCAGACGGCTTCTGTGGCGTGCAAAGCACTACATGCTCTTGCCGTATTGGAATaGACCCAGATTCACAAGGGG +
Preference number: 4 (lower is better)
Translates to: YAPHTRQTASVACKALHALAVLE*TQIHKG
Trigger: CCCCTTGTGAATCTGGGTTCATTCCAATACGGCAAG...AGCATGTAGTGCTTTGCACGCCACAGAAGCCGTCTGCCGTGTGTGAGGAGCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR TCA 90 bp TCCATTGTATGCTCCTCACACACGGCAGACGGCTTCTGTGGCGTGCAAAGCACTGTGGCTGCCAATATATaGGAGGATTTTGAGTCCGGG +
Preference number: 4 (lower is better)
Translates to: SIVCSSHTADGFCGVQSTVAANI*EDFESG
Trigger: CCCGGACTCAAAATCCTCTCATATATTGGCAGCCAC...AGTGCTTTGCACGCCACAGAAGCCGTCTGCCGTGTGTGAGGAGCATACAATGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR TCA 90 bp CTGATCATTTCCCTTGAACACAGGCCAGGAACGTGCCTTGTGTGTTTAGGTGGGCCATACTGCACAGGCTaGAACAACCTGCTGGCCTTC +
Preference number: 4 (lower is better)
Translates to: LIISLEHRPGTCLVCLGGPYCTG*NNLLAF
Trigger: GAAGGCCAGCAGGTTGTTTCAGCCTGTGCAGTATGG...CCCACCTAAACACACAAGGCACGTTCCTGGCCTGTGTTCAAGGGAAATGATCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR TCA 90 bp TCCCAGGGTCGCCAATTAGAGTCTGACAGTGTTCGGGCTGCTGCCTTTATAGTCTGCTGTGCCTTCTGCTaGTCAGCCAGAGCCTTTTTC +
Preference number: 4 (lower is better)
Translates to: SQGRQLESDSVRAAAFIVCCAFC*SARAFF
Trigger: GAAAAAGGCTCTGGCTGATCAGCAGAAGGCACAGCA...GACTATAAAGGCAGCAGCCCGAACACTGTCAGACTCTAATTGGCGACCCTGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR GCA 90 bp AGAGGAAGCCATGTTGTCACTTTTTCCATGAGCCACGTAGTACAGAGAACGCGGACAGGGCCCACGCTCTaGAGGGTGATGTTCACGTTC +
Preference number: 4 (lower is better)
Translates to: RGSHVVTFSMSHVVQRTRTGPTL*RVMFTF
Trigger: GAACGTGAACATCACCCTGCAGAGCGTGGGCCCTGT...CCGCGTTCTCTGTACTACGTGGCTCATGGAAAAAGTGACAACATGGCTTCCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR GCA 90 bp CGTGACATGGTCCCAAGGTTCACTAATAAAGCGTTTTCTGTGAGGAAGGTAGTTTGTGCTTCCGGCCCCTaGTACCAGGCTCCCTGCGAG +
Preference number: 4 (lower is better)
Translates to: RDMVPRFTNKAFSVRKVVCASGP*YQAPCE
Trigger: CTCGCAGGGAGCCTGGTAGCAGGGGCCGGAAGCACA...AACTACCTTCCTCACAGAAAACGCTTTATTAGTGAACCTTGGGACCATGTCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR GCA 90 bp TGGGGGAGGCCACTGTTGGCTGCTCTTTGGAATAACAATGCAATGACTGATCATGGTCCGTCTCTACTGTaGTTCCGGCCCCTGCTACCA +
Preference number: 4 (lower is better)
Translates to: WGRPLLAALWNNNAMTDHGPSLL*FRPLLP
Trigger: TGGTAGCAGGGGCCGGAAGCACAGTAGAGACGGACC...ATGATCAGTCATTGCATTGTTATTCCAAAGAGCAGCCAACAGTGGCCTCCCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR GCA 90 bp CTGATCATTTCCCTTGAACACAGGCCAGGAACGTGCCTTGTGTGTTTAGGTGGGCGCCTCAGTCTGCTCTaGTCTTCCTTCTTCCCCCTT +
Preference number: 4 (lower is better)
Translates to: LIISLEHRPGTCLVCLGGRLSLL*SSFFPL
Trigger: AAGGGGGAAGAAGGAAGAGCAGAGCAGACTGAGGCG...CCCACCTAAACACACAAGGCACGTTCCTGGCCTGTGTTCAAGGGAAATGATCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR GCA 90 bp TCTGGCAGACACTGTGGAAGCCCACGCCTTATCTTTAGAAAGTCCATTGTATGCGGCGGCTGCGAGGTCTaGACTTGCACTTGGGCTGTT +
Preference number: 4 (lower is better)
Translates to: SGRHCGSPRLIFRKSIVCGGCEV*TCTWAV
Trigger: AACAGCCCAAGTGCAAGTGCAGACCTCGCAGCCGCC...GCATACAATGGACTTTCTAAAGATAAGGCGTGGGCTTCCACAGTGTCTGCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR GCA 90 bp AAAGAACTAAACTCTGGCAGACACTGTGGAAGCCCACGCCTTATCTTTAGAAAGTGTGCGGTGATCTTCTaGTGGACGGCTGCCGGGCCC +
Preference number: 4 (lower is better)
Translates to: KELNSGRHCGSPRLIFRKCAVIF*WTAAGP
Trigger: GGGCCCGGCAGCCGTCCAGCAGAAGATCACCGCACA...CTTTCTAAAGATAAGGCGTGGGCTTCCACAGTGTCTGCCAGAGTTTAGTTCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR GCA 90 bp TACTTTTCTCCACATTTCTTATCAAGAGCTCAAGTGAGCTCCCCAGTTGATTTCGGGATCATCTGCACCTaGTGCCCGGCCGCCGTCGCC +
Preference number: 4 (lower is better)
Translates to: YFSPHFLSRAQVSSPVDFGIICT*CPAAVA
Trigger: GGCGACGGCGGCCGGGCAGCAGGTGCAGATGATCCC...GAAATCAACTGGGGAGCTCACTTGAGCTCTTGATAAGAAATGTGGAGAAAAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR GCA 90 bp TCCATTGTATGCTCCTCACACACGGCAGACGGCTTCTGTGGCGTGCAAAGCACTGAGATGCGTCTTGAGTaGACTGAGTTGGGCATCAGT +
Preference number: 4 (lower is better)
Translates to: SIVCSSHTADGFCGVQSTEMRLE*TELGIS
Trigger: ACTGATGCCCAACTCAGTGCACTCAAGACGCATCTC...AGTGCTTTGCACGCCACAGAAGCCGTCTGCCGTGTGTGAGGAGCATACAATGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR GCA 90 bp GCTGTCGTAAGTCCACAAGGAAGAGTTGACTGGGCCCACCGCTATAGCCAATACGCACAGGTGGTTCTCTaGTTCACTGGCAGAACCACA +
Preference number: 4 (lower is better)
Translates to: AVVSPQGRVDWAHRYSQYAQVVL*FTGRTT
Trigger: TGTGGTTCTGCCAGTGAAGCAGAGAACCACCTGTGC...GTATTGGCTATAGCGGTGGGCCCAGTCAACTCTTCCTTGTGGACTTACGACAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR GCA 90 bp ACGCCTTCCACAACAGCACAGGTGGTTCTCTGCTTCACTGGCAGAACCACACAAGCACAGGTGGTTCTCTaGTTCACTGGCAGAACCACA +
Preference number: 4 (lower is better)
Translates to: TPSTTAQVVLCFTGRTTQAQVVL*FTGRTT
Trigger: TGTGGTTCTGCCAGTGAAGCAGAGAACCACCTGTGC...TTGTGTGGTTCTGCCAGTGAAGCAGAGAACCACCTGTGCTGTTGTGGAAGGCGT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR GCA 90 bp ATTATATCTTTCCCAGTGCTGAATCTCTTGCGTGACATGGTCCCAAGGTTCACTCGCTCTCACGGCACGTaGCAAGCCAGGGAGAACGGG +
Preference number: 4 (lower is better)
Translates to: IISFPVLNLLRDMVPRFTRSHGT*QARENG
Trigger: CCCGTTCTCCCTGGCTTGGCACGTGCCGTGAGAGCG...AGTGAACCTTGGGACCATGTCACGCAAGAGATTCAGCACTGGGAAAGATATAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR GCA 90 bp AGGTGGTTCTCTGCTTCACTGGCAGAACCACACAAGCTTATCCTAGAGAAAATCCTTCAGCTTTGCTGCTaGTGGTCGGGCTGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: RWFSASLAEPHKLILEKILQLCC*WSGCWG
Trigger: GCCCCAGCAGCCCGACCAGCAGCAGCAAAGCTGAAG...GATTTTCTCTAGGATAAGCTTGTGTGGTTCTGCCAGTGAAGCAGAGAACCACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR GCA 90 bp TTTCCAACTCTTACTTGCCGTATTGGAATGAACCCAGATTCACAAGGGGAAGGCAAGTACGGCGCAGCGTaGTCTCTCAGGCCCTGCCTC +
Preference number: 4 (lower is better)
Translates to: FPTLTCRIGMNPDSQGEGKYGAA*SLRPCL
Trigger: GAGGCAGGGCCTGAGAGAGCACGCTGCGCCGTACTT...GCCTTCCCCTTGTGAATCTGGGTTCATTCCAATACGGCAAGTAAGAGTTGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR GCA 90 bp AAAGAACTAAACTCTGGCAGACACTGTGGAAGCCCACGCCTTATCTTTAGAAAGGTGGTCTGCCGCAGCTaGTGGAAGTACGGCGCAGCG +
Preference number: 4 (lower is better)
Translates to: KELNSGRHCGSPRLIFRKVVCRS*WKYGAA
Trigger: CGCTGCGCCGTACTTCCAGCAGCTGCGGCAGACCAC...CTTTCTAAAGATAAGGCGTGGGCTTCCACAGTGTCTGCCAGAGTTTAGTTCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR GCA 90 bp AACACACTATGTCAAATACCAGCTTCCCCCGAAAACTGGAGATGCGTCTTGAGTCGTGGAGCCGTGGTCTaGCGCAGCTGCTGGAAGTAC +
Preference number: 4 (lower is better)
Translates to: NTLCQIPASPENWRCVLSRGAVV*RSCWKY
Trigger: GTACTTCCAGCAGCTGCGGCAGACCACGGCTCCACG...ACTCAAGACGCATCTCCAGTTTTCGGGGGAAGCTGGTATTTGACATAGTGTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR GCA 90 bp AACACACTATGTCAAATACCAGCTTCCCCCGAAAACTGGAGATGCGTCTTGAGTCGGGCCTCCCTCTCCTaGAGGGTCTTCAGGTTCCAG +
Preference number: 4 (lower is better)
Translates to: NTLCQIPASPENWRCVLSRASLS*RVFRFQ
Trigger: CTGGAACCTGAAGACCCTGCAGGAGAGGGAGGCCCG...ACTCAAGACGCATCTCCAGTTTTCGGGGGAAGCTGGTATTTGACATAGTGTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR GCA 90 bp CAGCACAGGTGGTTCTCTGCTTCACTGGCAGAACCACACAAGCTTATCCTAGAGAACTGCTTTACAGCCTaGAGCAGCGCCCAGTCCTCA +
Preference number: 4 (lower is better)
Translates to: QHRWFSASLAEPHKLILENCFTA*SSAQSS
Trigger: TGAGGACTGGGCGCTGCTGCAGGCTGTAAAGCAGTT...CTCTAGGATAAGCTTGTGTGGTTCTGCCAGTGAAGCAGAGAACCACCTGTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR GCA 90 bp ATAGTCTGTGTTCTCAAAGTTTCCAACTCTTACTTGCCGTATTGGAATGAACCCCGGCTGGCTGCCCGCTaGCTGTGGTTGTGGCAGCGG +
Preference number: 4 (lower is better)
Translates to: IVCVLKVSNSYLPYWNEPRLAAR*LWLWQR
Trigger: CCGCTGCCACAACCACAGGCAGCGGGCAGCCAGCCG...GGGTTCATTCCAATACGGCAAGTAAGAGTTGGAAACTTTGAGAACACAGACTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR GCA 90 bp CTGATCATTTCCCTTGAACACAGGCCAGGAACGTGCCTTGTGTGTTTAGGTGGGAACACCCTGAGTCGTTaGCATGGACACCAGGTCAGG +
Preference number: 4 (lower is better)
Translates to: LIISLEHRPGTCLVCLGGNTLSR*HGHQVR
Trigger: CCTGACCTGGTGTCCATGGCAACGACTCAGGGTGTT...CCCACCTAAACACACAAGGCACGTTCCTGGCCTGTGTTCAAGGGAAATGATCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR GCA 90 bp TCCCAGGGTCGCCAATTAGAGTCTGACAGTGTTCGGGCTGCTGCCTTTATAGTCTGCTGCTGCTGCTGCTaGCTGAGAAGCTGGAAATGT +
Preference number: 4 (lower is better)
Translates to: SQGRQLESDSVRAAAFIVCCCCC*LRSWKC
Trigger: ACATTTCCAGCTTCTCAGGCAGCAGCAGCAGCAGCA...GACTATAAAGGCAGCAGCCCGAACACTGTCAGACTCTAATTGGCGACCCTGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CCA 90 bp TCTGGCAGACACTGTGGAAGCCCACGCCTTATCTTTAGAAAGTCCATTGTATGCGACTCTGTGGTTTGGTaGGGGCAGATGCCACCACCC +
Preference number: 4 (lower is better)
Translates to: SGRHCGSPRLIFRKSIVCDSVVW*GQMPPP
Trigger: GGGTGGTGGCATCTGCCCCCACCAAACCACAGAGTC...GCATACAATGGACTTTCTAAAGATAAGGCGTGGGCTTCCACAGTGTCTGCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CCA 90 bp AACCCATCTCGGATGATTGACTTTAGACAGGCCTTCCCCTCTGCGAAGACCACGTGTCTTGGGACGAGGTaGCATTCTGAGCAGGACTCT +
Preference number: 4 (lower is better)
Translates to: NPSRMIDFRQAFPSAKTTCLGTR*HSEQDS
Trigger: AGAGTCCTGCTCAGAATGCCACCTCGTCCCAAGACA...CGTGGTCTTCGCAGAGGGGAAGGCCTGTCTAAAGTCAATCATCCGAGATGGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CCA 90 bp TCTCCACATTTCTTATCAAGAGCTCAAGTGAGCTCCCCAGTTGATTTCACTGACCTATCTCCCGGGCCGTaGAGGCGGCTATCCGCCTCA +
Preference number: 4 (lower is better)
Translates to: SPHFLSRAQVSSPVDFTDLSPGP*RRLSAS
Trigger: TGAGGCGGATAGCCGCCTCCACGGCCCGGGAGATAG...GTCAGTGAAATCAACTGGGGAGCTCACTTGAGCTCTTGATAAGAAATGTGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CCA 90 bp TTTCCAACTCTTACTTGCCGTATTGGAATGAACCCAGATTCACAAGGGGAAGGCTGTGCAGCCTGGGGCTaGATGGCCTTCTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: FPTLTCRIGMNPDSQGEGCAAWG*MAFCCW
Trigger: CCAGCAGCAGAAGGCCATCCAGCCCCAGGCTGCACA...GCCTTCCCCTTGTGAATCTGGGTTCATTCCAATACGGCAAGTAAGAGTTGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CCA 90 bp CAAGCCACAGCACAAAGGATACTATTGGATATGGACCTTTTTGCTTTGGTGAAAGAGCTGGCGGGCACCTaGGCTGGGTTGGGAGCGCCT +
Preference number: 4 (lower is better)
Translates to: QATAQRILLDMDLFALVKELAGT*AGLGAP
Trigger: AGGCGCTCCCAACCCAGCCCAGGTGCCCGCCAGCTC...TTTCACCAAAGCAAAAAGGTCCATATCCAATAGTATCCTTTGTGCTGTGGCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CCA 90 bp CTGATCATTTCCCTTGAACACAGGCCAGGAACGTGCCTTGTGTGTTTAGGTGGGCCCTCATCTGTAACTTaGGCTGCTGGCTTGGGCTGT +
Preference number: 4 (lower is better)
Translates to: LIISLEHRPGTCLVCLGGPSSVT*AAGLGC
Trigger: ACAGCCCAAGCCAGCAGCCCAAGTTACAGATGAGGG...CCCACCTAAACACACAAGGCACGTTCCTGGCCTGTGTTCAAGGGAAATGATCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CCA 90 bp TCCCAGGGTCGCCAATTAGAGTCTGACAGTGTTCGGGCTGCTGCCTTTATAGTCGCTTCCCCCGAAAACTaGAGATGCGTCTTGAGTGCA +
Preference number: 4 (lower is better)
Translates to: SQGRQLESDSVRAAAFIVASPEN*RCVLSA
Trigger: TGCACTCAAGACGCATCTCCAGTTTTCGGGGGAAGC...GACTATAAAGGCAGCAGCCCGAACACTGTCAGACTCTAATTGGCGACCCTGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CCA 90 bp ACGCCTTCCACAACAGCACAGGTGGTTCTCTGCTTCACTGGCAGAACCACACAACAAGGAAGAGTTGACTaGGCCCACCGCTATAGCCAA +
Preference number: 4 (lower is better)
Translates to: TPSTTAQVVLCFTGRTTQQGRVD*AHRYSQ
Trigger: TTGGCTATAGCGGTGGGCCCAGTCAACTCTTCCTTG...TTGTGTGGTTCTGCCAGTGAAGCAGAGAACCACCTGTGCTGTTGTGGAAGGCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CCA 90 bp TCTGGCAGACACTGTGGAAGCCCACGCCTTATCTTTAGAAAGTCCATTGTATGCGGACGGATACTCCAGTaGCCCCGCCACGTAGGAAGA +
Preference number: 4 (lower is better)
Translates to: SGRHCGSPRLIFRKSIVCGRILQ*PRHVGR
Trigger: TCTTCCTACGTGGCGGGGCCACTGGAGTATCCGTCC...GCATACAATGGACTTTCTAAAGATAAGGCGTGGGCTTCCACAGTGTCTGCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CCA 90 bp CGTGACATGGTCCCAAGGTTCACTAATAAAGCGTTTTCTGTGAGGAAGGTAGTTTGTCACCGGCGTCTCTaGCTGAGCCACGCGGCTCTG +
Preference number: 4 (lower is better)
Translates to: RDMVPRFTNKAFSVRKVVCHRRL*LSHAAL
Trigger: CAGAGCCGCGTGGCTCAGCCAGAGACGCCGGTGACA...AACTACCTTCCTCACAGAAAACGCTTTATTAGTGAACCTTGGGACCATGTCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CCA 90 bp TGGGGGAGGCCACTGTTGGCTGCTCTTTGGAATAACAATGCAATGACTGATCATGTGAGCTGCCGGAGCTaGCTGTGTGACAGGGTGAAC +
Preference number: 4 (lower is better)
Translates to: WGRPLLAALWNNNAMTDHVSCRS*LCDRVN
Trigger: GTTCACCCTGTCACACAGCCAGCTCCGGCAGCTCAC...ATGATCAGTCATTGCATTGTTATTCCAAAGAGCAGCCAACAGTGGCCTCCCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CCA 90 bp ATTATATCTTTCCCAGTGCTGAATCTCTTGCGTGACATGGTCCCAAGGTTCACTGTCTGCCGCAGCTGCTaGAAGTACGGCGCAGCGTGC +
Preference number: 4 (lower is better)
Translates to: IISFPVLNLLRDMVPRFTVCRSC*KYGAAC
Trigger: GCACGCTGCGCCGTACTTCCAGCAGCTGCGGCAGAC...AGTGAACCTTGGGACCATGTCACGCAAGAGATTCAGCACTGGGAAAGATATAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CCA 90 bp TGTGACATCTGTACTACCATTGCCTCTGCGTGGTCCTCTGGGCCTCACGCCAGCAATTTTCAGAAGTCCTaGTGTTGCGCGGTCAAACAG +
Preference number: 4 (lower is better)
Translates to: CDICTTIASAWSSGPHASNFQKS*CCAVKQ
Trigger: CTGTTTGACCGCGCAACACCAGGACTTCTGAAAATT...GCTGGCGTGAGGCCCAGAGGACCACGCAGAGGCAATGGTAGTACAGATGTCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR TCA 90 bp CAAGCCACAGCACAAAGGATACTATTGGATATGGACCTTTTTGCTTTGGTGAAATGCCGACGGGCTTGCTaGGGGAGCGAAGGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: QATAQRILLDMDLFALVKCRRAC*GSEGSC
Trigger: GCAGCTCCCTTCGCTCCCTCAGCAAGCCCGTCGGCA...TTTCACCAAAGCAAAAAGGTCCATATCCAATAGTATCCTTTGTGCTGTGGCTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR TCA 90 bp CGTGACATGGTCCCAAGGTTCACTAATAAAGCGTTTTCTGTGAGGAAGGTAGTTCCACGCTCTGCAGGGTaGTGTTCACGTTCTGCCCGG +
Preference number: 4 (lower is better)
Translates to: RDMVPRFTNKAFSVRKVVPRSAG*CSRSAR
Trigger: CCGGGCAGAACGTGAACATCACCCTGCAGAGCGTGG...AACTACCTTCCTCACAGAAAACGCTTTATTAGTGAACCTTGGGACCATGTCACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR TCA 90 bp AGAGGAAGCCATGTTGTCACTTTTTCCATGAGCCACGTAGTACAGAGAACGCGGTGTGGAACTTGCACCTaGGAGGTCGTCGTCGTCTGT +
Preference number: 4 (lower is better)
Translates to: RGSHVVTFSMSHVVQRTRCGTCT*EVVVVC
Trigger: ACAGACGACGACGACCTCTCAGGTGCAAGTTCCACA...CCGCGTTCTCTGTACTACGTGGCTCATGGAAAAAGTGACAACATGGCTTCCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR TCA 90 bp TCCCAGGGTCGCCAATTAGAGTCTGACAGTGTTCGGGCTGCTGCCTTTATAGTCTCGTACCCTCAGCTGTaGCATCTGTACTACCATTGC +
Preference number: 4 (lower is better)
Translates to: SQGRQLESDSVRAAAFIVSYPQL*HLYYHC
Trigger: GCAATGGTAGTACAGATGTCACAGCTGAGGGTACGA...GACTATAAAGGCAGCAGCCCGAACACTGTCAGACTCTAATTGGCGACCCTGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR TCA 90 bp AGGTGGTTCTCTGCTTCACTGGCAGAACCACACAAGCTTATCCTAGAGAAAATCACAGGAGACCCTCACTaGCGTGAGATCGGGGCGGAA +
Preference number: 4 (lower is better)
Translates to: RWFSASLAEPHKLILEKITGDPH*REIGAE
Trigger: TTCCGCCCCGATCTCACGTCAGTGAGGGTCTCCTGT...GATTTTCTCTAGGATAAGCTTGTGTGGTTCTGCCAGTGAAGCAGAGAACCACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR TCA 90 bp CTGTTTAACACACTATGTCAAATACCAGCTTCCCCCGAAAACTGGAGATGCGTCGTTGGCTCTGCAGGGTaGAAACCGCTTCCCAGTGCC +
Preference number: 4 (lower is better)
Translates to: LFNTLCQIPASPENWRCVVGSAG*KPLPSA
Trigger: GGCACTGGGAAGCGGTTTTCACCCTGCAGAGCCAAC...GACGCATCTCCAGTTTTCGGGGGAAGCTGGTATTTGACATAGTGTGTTAAACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR TCA 90 bp CTGATCATTTCCCTTGAACACAGGCCAGGAACGTGCCTTGTGTGTTTAGGTGGGCTATCGCACCACTCCTaGGCTTTGGCATCCATCACT +
Preference number: 4 (lower is better)
Translates to: LIISLEHRPGTCLVCLGGLSHHS*ALASIT
Trigger: AGTGATGGATGCCAAAGCTCAGGAGTGGTGCGATAG...CCCACCTAAACACACAAGGCACGTTCCTGGCCTGTGTTCAAGGGAAATGATCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR TCA 90 bp CAGCACAGGTGGTTCTCTGCTTCACTGGCAGAACCACACAAGCTTATCCTAGAGCAAACTCCTCAGCTTTaGCCGGGAAGCCAGCATCAT +
Preference number: 4 (lower is better)
Translates to: QHRWFSASLAEPHKLILEQTPQL*PGSQHH
Trigger: ATGATGCTGGCTTCCCGGTCAAAGCTGAGGAGTTTG...CTCTAGGATAAGCTTGTGTGGTTCTGCCAGTGAAGCAGAGAACCACCTGTGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR TCA 90 bp CAGCACAGGTGGTTCTCTGCTTCACTGGCAGAACCACACAAGCTTATCCTAGAGCAGGTGACACGATTGTaGGGTTCAAAGGCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: QHRWFSASLAEPHKLILEQVTRL*GSKAAP
Trigger: TGGAGCTGCCTTTGAACCTCACAATCGTGTCACCTG...CTCTAGGATAAGCTTGTGTGGTTCTGCCAGTGAAGCAGAGAACCACCTGTGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR TCA 90 bp TATGCTCCTCACACACGGCAGACGGCTTCTGTGGCGTGCAAAGCACTACATGCTGCTCGTCCCAGTAACTaGTGTTTTAATGGTTCCTGC +
Preference number: 4 (lower is better)
Translates to: YAPHTRQTASVACKALHAARPSN*CFNGSC
Trigger: GCAGGAACCATTAAAACATCAGTTACTGGGACGAGC...AGCATGTAGTGCTTTGCACGCCACAGAAGCCGTCTGCCGTGTGTGAGGAGCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR GCA 90 bp TTTCCAACTCTTACTTGCCGTATTGGAATGAACCCAGATTCACAAGGGGAAGGCGCGGTCGGCATTAGTTaGTGGAGAGGAACGCCTGCG +
Preference number: 4 (lower is better)
Translates to: FPTLTCRIGMNPDSQGEGAVGIS*WRGTPA
Trigger: CGCAGGCGTTCCTCTCCAGCAACTAATGCCGACCGC...GCCTTCCCCTTGTGAATCTGGGTTCATTCCAATACGGCAAGTAAGAGTTGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR GCA 90 bp CTGTTTAACACACTATGTCAAATACCAGCTTCCCCCGAAAACTGGAGATGCGTCCACAGCTTTGATCTGTaGTGGGGACTGGGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: LFNTLCQIPASPENWRCVHSFDL*WGLGLA
Trigger: GGCCAGGCCCAGTCCCCAGCACAGATCAAAGCTGTG...GACGCATCTCCAGTTTTCGGGGGAAGCTGGTATTTGACATAGTGTGTTAAACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR GCA 90 bp AACACACTATGTCAAATACCAGCTTCCCCCGAAAACTGGAGATGCGTCTTGAGTCACAGCTTTGATCTGTaGTGGGGACTGGGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: NTLCQIPASPENWRCVLSHSFDL*WGLGLA
Trigger: GGCCAGGCCCAGTCCCCAGCACAGATCAAAGCTGTG...ACTCAAGACGCATCTCCAGTTTTCGGGGGAAGCTGGTATTTGACATAGTGTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR GCA 90 bp TCTGGCAGACACTGTGGAAGCCCACGCCTTATCTTTAGAAAGTCCATTGTATGCTGCGAGGTCTGCACTTaGACTTGGGCTGTTGGCTGC +
Preference number: 4 (lower is better)
Translates to: SGRHCGSPRLIFRKSIVCCEVCT*TWAVGC
Trigger: GCAGCCAACAGCCCAAGTGCAAGTGCAGACCTCGCA...GCATACAATGGACTTTCTAAAGATAAGGCGTGGGCTTCCACAGTGTCTGCCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR GCA 90 bp CAAGCCACAGCACAAAGGATACTATTGGATATGGACCTTTTTGCTTTGGTGAAAGTCTGCATCTGCCCTTaGGCCTGCAGGAGCCGGGCC +
Preference number: 4 (lower is better)
Translates to: QATAQRILLDMDLFALVKVCICP*ACRSRA
Trigger: GGCCCGGCTCCTGCAGGCGCAAGGGCAGATGCAGAC...TTTCACCAAAGCAAAAAGGTCCATATCCAATAGTATCCTTTGTGCTGTGGCTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330386.7
CDS-3UTR GCA 90 bp AACACACTATGTCAAATACCAGCTTCCCCCGAAAACTGGAGATGCGTCTTGAGTCACCACGGTCTGTCCTaGTGCCTTCTGTGGCTGACC +
Preference number: 4 (lower is better)
Translates to: NTLCQIPASPENWRCVLSHHGLS*CLLWLT
Trigger: GGTCAGCCACAGAAGGCAGCAGGACAGACCGTGGTG...ACTCAAGACGCATCTCCAGTTTTCGGGGGAAGCTGGTATTTGACATAGTGTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR GCA 90 bp AAAGAACTAAACTCTGGCAGACACTGTGGAAGCCCACGCCTTATCTTTAGAAAGAGCTTCAGCAGCTGCTaGATGTGCACGGGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: KELNSGRHCGSPRLIFRKSFSSC*MCTGWA
Trigger: GGCCCAGCCCGTGCACATGCAGCAGCTGCTGAAGCT...CTTTCTAAAGATAAGGCGTGGGCTTCCACAGTGTCTGCCAGAGTTTAGTTCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR GCA 90 bp AACACACTATGTCAAATACCAGCTTCCCCCGAAAACTGGAGATGCGTCTTGAGTATCTGGGTCTGCACTTaGTGGGCCCCGGCCAGTTTC +
Preference number: 4 (lower is better)
Translates to: NTLCQIPASPENWRCVLSIWVCT*WAPASF
Trigger: GAAACTGGCCGGGGCCCAGCAAGTGCAGACCCAGAT...ACTCAAGACGCATCTCCAGTTTTCGGGGGAAGCTGGTATTTGACATAGTGTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR GCA 90 bp CTATGTCAAATACCAGCTTCCCCCGAAAACTGGAGATGCGTCTTGAGTGCACTGATCTGTAACTTGGGCTaGTGGCTTGGGCTGTCGGAG +
Preference number: 4 (lower is better)
Translates to: LCQIPASPENWRCVLSALICNLG*WLGLSE
Trigger: CTCCGACAGCCCAAGCCAGCAGCCCAAGTTACAGAT...CAGTGCACTCAAGACGCATCTCCAGTTTTCGGGGGAAGCTGGTATTTGACATAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR GCA 90 bp TCCATTGTATGCTCCTCACACACGGCAGACGGCTTCTGTGGCGTGCAAAGCACTGATTTCACTGACTCCTaGTGTATCGCTGTCCACAGA +
Preference number: 4 (lower is better)
Translates to: SIVCSSHTADGFCGVQSTDFTDS*CIAVHR
Trigger: TCTGTGGACAGCGATACAGCAGGAGTCAGTGAAATC...AGTGCTTTGCACGCCACAGAAGCCGTCTGCCGTGTGTGAGGAGCATACAATGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR GCA 90 bp CAGCACAGGTGGTTCTCTGCTTCACTGGCAGAACCACACAAGCTTATCCTAGAGGCCTGGACAGTCATCTaGATCTTCCTCTCCGCTTGT +
Preference number: 4 (lower is better)
Translates to: QHRWFSASLAEPHKLILEAWTVI*IFLSAC
Trigger: ACAAGCGGAGAGGAAGATGCAGATGACTGTCCAGGC...CTCTAGGATAAGCTTGTGTGGTTCTGCCAGTGAAGCAGAGAACCACCTGTGCTG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR GCA 90 bp GCCAAAATCAAGCCACAGCACAAAGGATACTATTGGATATGGACCTTTTTGCTTTGGGGTGGAGGCCTGTaGTGTGGTCTGGGCCCGCAG +
Preference number: 4 (lower is better)
Translates to: AKIKPQHKGYYWIWTFLLWGGGL*CGLGPQ
Trigger: CTGCGGGCCCAGACCACAGCACAGGCCTCCACCCCA...AAGCAAAAAGGTCCATATCCAATAGTATCCTTTGTGCTGTGGCTTGATTTTGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR GCA 90 bp CAAGCCACAGCACAAAGGATACTATTGGATATGGACCTTTTTGCTTTGGTGAAAGTCGTGATTGCGGGCTaGGCCTTCGCTGGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: QATAQRILLDMDLFALVKVVIAG*AFAGAC
Trigger: GCAGGCCCCAGCGAAGGCGCAGCCCGCAATCACGAC...TTTCACCAAAGCAAAAAGGTCCATATCCAATAGTATCCTTTGTGCTGTGGCTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR GCA 90 bp TTTCCAACTCTTACTTGCCGTATTGGAATGAACCCAGATTCACAAGGGGAAGGCGGCAGCTGGGACCCCTaGGATGGTGTTCACGATCAC +
Preference number: 4 (lower is better)
Translates to: FPTLTCRIGMNPDSQGEGGSWDP*DGVHDH
Trigger: GTGATCGTGAACACCATCGCAGGGGTCCCAGCTGCC...GCCTTCCCCTTGTGAATCTGGGTTCATTCCAATACGGCAAGTAAGAGTTGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CCA 90 bp ATTATATCTTTCCCAGTGCTGAATCTCTTGCGTGACATGGTCCCAAGGTTCACTATGTGTCGTTCTCCCTaGGCCTCAGGGCTGCGCTCC +
Preference number: 4 (lower is better)
Translates to: IISFPVLNLLRDMVPRFTMCRSP*ASGLRS
Trigger: GGAGCGCAGCCCTGAGGCCCAGGGAGAACGACACAT...AGTGAACCTTGGGACCATGTCACGCAAGAGATTCAGCACTGGGAAAGATATAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CCA 90 bp AAAGAACTAAACTCTGGCAGACACTGTGGAAGCCCACGCCTTATCTTTAGAAAGGTCTGCACTTGCACTTaGGCTGTTGGCTGCGGGGGC +
Preference number: 4 (lower is better)
Translates to: KELNSGRHCGSPRLIFRKVCTCT*AVGCGG
Trigger: GCCCCCGCAGCCAACAGCCCAAGTGCAAGTGCAGAC...CTTTCTAAAGATAAGGCGTGGGCTTCCACAGTGTCTGCCAGAGTTTAGTTCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CCA 90 bp CAAGCCACAGCACAAAGGATACTATTGGATATGGACCTTTTTGCTTTGGTGAAATTCGCCAAGGCCACCTaGGCTGGCTGGGGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: QATAQRILLDMDLFALVKFAKAT*AGWGAW
Trigger: CCAGGCACCCCAGCCAGCCCAGGTGGCCTTGGCGAA...TTTCACCAAAGCAAAAAGGTCCATATCCAATAGTATCCTTTGTGCTGTGGCTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CCA 90 bp AAAGAACTAAACTCTGGCAGACACTGTGGAAGCCCACGCCTTATCTTTAGAAAGTGCATGTGCACGGGCTaGGCCACCACGGTCTGTCCT +
Preference number: 4 (lower is better)
Translates to: KELNSGRHCGSPRLIFRKCMCTG*ATTVCP
Trigger: AGGACAGACCGTGGTGGCCCAGCCCGTGCACATGCA...CTTTCTAAAGATAAGGCGTGGGCTTCCACAGTGTCTGCCAGAGTTTAGTTCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CCA 90 bp AAAGAACTAAACTCTGGCAGACACTGTGGAAGCCCACGCCTTATCTTTAGAAAGTGTGCAGCCTGGGGCTaGATGGCCTTCTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: KELNSGRHCGSPRLIFRKCAAWG*MAFCCW
Trigger: CCAGCAGCAGAAGGCCATCCAGCCCCAGGCTGCACA...CTTTCTAAAGATAAGGCGTGGGCTTCCACAGTGTCTGCCAGAGTTTAGTTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CCA 90 bp AACCCATCTCGGATGATTGACTTTAGACAGGCCTTCCCCTCTGCGAAGACCACGGGAAGTTTTGCAACCTaGATCTGGGTCTGCACTTGC +
Preference number: 4 (lower is better)
Translates to: NPSRMIDFRQAFPSAKTTGSFAT*IWVCTC
Trigger: GCAAGTGCAGACCCAGATCCAGGTTGCAAAACTTCC...CGTGGTCTTCGCAGAGGGGAAGGCCTGTCTAAAGTCAATCATCCGAGATGGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CCA 90 bp AGAGGAAGCCATGTTGTCACTTTTTCCATGAGCCACGTAGTACAGAGAACGCGGCCCTCATCTGTAACTTaGGCTGCTGGCTTGGGCTGT +
Preference number: 4 (lower is better)
Translates to: RGSHVVTFSMSHVVQRTRPSSVT*AAGLGC
Trigger: ACAGCCCAAGCCAGCAGCCCAAGTTACAGATGAGGG...CCGCGTTCTCTGTACTACGTGGCTCATGGAAAAAGTGACAACATGGCTTCCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CCA 90 bp TGTGACATCTGTACTACCATTGCCTCTGCGTGGTCCTCTGGGCCTCACGCCAGCATCTCTTGCGTGACATaGTCCCAAGGTTCACTAATA +
Preference number: 4 (lower is better)
Translates to: CDICTTIASAWSSGPHASISCVT*SQGSLI
Trigger: TATTAGTGAACCTTGGGACCATGTCACGCAAGAGAT...GCTGGCGTGAGGCCCAGAGGACCACGCAGAGGCAATGGTAGTACAGATGTCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CCA 90 bp AACACACTATGTCAAATACCAGCTTCCCCCGAAAACTGGAGATGCGTCTTGAGTGGGGACGGGTGCGGGTaGGGACTGAAAGGTGAAATG +
Preference number: 4 (lower is better)
Translates to: NTLCQIPASPENWRCVLSGDGCG*GLKGEM
Trigger: CATTTCACCTTTCAGTCCCCACCCGCACCCGTCCCC...ACTCAAGACGCATCTCCAGTTTTCGGGGGAAGCTGGTATTTGACATAGTGTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CCA 90 bp TCCCAGGGTCGCCAATTAGAGTCTGACAGTGTTCGGGCTGCTGCCTTTATAGTCAGTAAAAGTTTCCACTaGGAGCCAGATGTGAGGCGC +
Preference number: 4 (lower is better)
Translates to: SQGRQLESDSVRAAAFIVSKSFH*EPDVRR
Trigger: GCGCCTCACATCTGGCTCCCAGTGGAAACTTTTACT...GACTATAAAGGCAGCAGCCCGAACACTGTCAGACTCTAATTGGCGACCCTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CCA 90 bp AACCCATCTCGGATGATTGACTTTAGACAGGCCTTCCCCTCTGCGAAGACCACGCTCACAACAACAAGATaGGGGCCCCAATTACCTTCG +
Preference number: 4 (lower is better)
Translates to: NPSRMIDFRQAFPSAKTTLTTTR*GPQLPS
Trigger: CGAAGGTAATTGGGGCCCCCATCTTGTTGTTGTGAG...CGTGGTCTTCGCAGAGGGGAAGGCCTGTCTAAAGTCAATCATCCGAGATGGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CCA 90 bp TACTTTTCTCCACATTTCTTATCAAGAGCTCAAGTGAGCTCCCCAGTTGATTTCCGCTGCCTGTGGTTGTaGCAGCGGTGGCGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: YFSPHFLSRAQVSSPVDFRCLWL*QRWRWL
Trigger: CAGCCACCGCCACCGCTGCCACAACCACAGGCAGCG...GAAATCAACTGGGGAGCTCACTTGAGCTCTTGATAAGAAATGTGGAGAAAAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CCA 90 bp AGGTGGTTCTCTGCTTCACTGGCAGAACCACACAAGCTTATCCTAGAGAAAATCCTGGAAGGTGGCAGCTaGGACCCCTGCGATGGTGTT +
Preference number: 4 (lower is better)
Translates to: RWFSASLAEPHKLILEKILEGGS*DPCDGV
Trigger: AACACCATCGCAGGGGTCCCAGCTGCCACCTTCCAG...GATTTTCTCTAGGATAAGCTTGTGTGGTTCTGCCAGTGAAGCAGAGAACCACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR TCA 90 bp AAAGAACTAAACTCTGGCAGACACTGTGGAAGCCCACGCCTTATCTTTAGAAAGGCTTGCCCACAGCTTTaGTCTGTGCTGGGGACTGGG +
Preference number: 4 (lower is better)
Translates to: KELNSGRHCGSPRLIFRKACPQL*SVLGTG
Trigger: CCCAGTCCCCAGCACAGATCAAAGCTGTGGGCAAGC...CTTTCTAAAGATAAGGCGTGGGCTTCCACAGTGTCTGCCAGAGTTTAGTTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR TCA 90 bp AGAGGAAGCCATGTTGTCACTTTTTCCATGAGCCACGTAGTACAGAGAACGCGGGCTGAATCTCTTGCGTaGCATGGTCCCAAGGTTCAC +
Preference number: 4 (lower is better)
Translates to: RGSHVVTFSMSHVVQRTRAESLA*HGPKVH
Trigger: GTGAACCTTGGGACCATGTCACGCAAGAGATTCAGC...CCGCGTTCTCTGTACTACGTGGCTCATGGAAAAAGTGACAACATGGCTTCCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR TCA 90 bp TCCCAGGGTCGCCAATTAGAGTCTGACAGTGTTCGGGCTGCTGCCTTTATAGTCGTGGGGACTGAAAGGTaGAATGATTTAGAGGAAGCC +
Preference number: 4 (lower is better)
Translates to: SQGRQLESDSVRAAAFIVVGTER*NDLEEA
Trigger: GGCTTCCTCTAAATCATTTCACCTTTCAGTCCCCAC...GACTATAAAGGCAGCAGCCCGAACACTGTCAGACTCTAATTGGCGACCCTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR TCA 90 bp CAGCACAGGTGGTTCTCTGCTTCACTGGCAGAACCACACAAGCTTATCCTAGAGTCGTACCCTCAGCTGTaGCATCTGTACTACCATTGC +
Preference number: 4 (lower is better)
Translates to: QHRWFSASLAEPHKLILESYPQL*HLYYHC
Trigger: GCAATGGTAGTACAGATGTCACAGCTGAGGGTACGA...CTCTAGGATAAGCTTGTGTGGTTCTGCCAGTGAAGCAGAGAACCACCTGTGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR TCA 90 bp TCTCCACATTTCTTATCAAGAGCTCAAGTGAGCTCCCCAGTTGATTTCACTGACTTCGTCCTGGCTCACTaGGCCCAGGCCTCATCGTAC +
Preference number: 4 (lower is better)
Translates to: SPHFLSRAQVSSPVDFTDFVLAH*AQASSY
Trigger: GTACGATGAGGCCTGGGCTCAGTGAGCCAGGACGAA...GTCAGTGAAATCAACTGGGGAGCTCACTTGAGCTCTTGATAAGAAATGTGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR TCA 90 bp CGTGACATGGTCCCAAGGTTCACTAATAAAGCGTTTTCTGTGAGGAAGGTAGTTCCTTCGTCAAAGGGCTaGCTGTGGCAGCAAGGGGTG +
Preference number: 4 (lower is better)
Translates to: RDMVPRFTNKAFSVRKVVPSSKG*LWQQGV
Trigger: CACCCCTTGCTGCCACAGTCAGCCCTTTGACGAAGG...AACTACCTTCCTCACAGAAAACGCTTTATTAGTGAACCTTGGGACCATGTCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR TCA 90 bp ATTATATCTTTCCCAGTGCTGAATCTCTTGCGTGACATGGTCCCAAGGTTCACTAGACCCTCACTGACGTaGGATCGGGGCGGAAACTCC +
Preference number: 4 (lower is better)
Translates to: IISFPVLNLLRDMVPRFTRPSLT*DRGGNS
Trigger: GGAGTTTCCGCCCCGATCTCACGTCAGTGAGGGTCT...AGTGAACCTTGGGACCATGTCACGCAAGAGATTCAGCACTGGGAAAGATATAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR TCA 90 bp GCTGTCGTAAGTCCACAAGGAAGAGTTGACTGGGCCCACCGCTATAGCCAATACATCAGGCACCAAATCTaGACAAGGGCTTGGATCCAA +
Preference number: 4 (lower is better)
Translates to: AVVSPQGRVDWAHRYSQYIRHQI*TRAWIQ
Trigger: TTGGATCCAAGCCCTTGTTCAGATTTGGTGCCTGAT...GTATTGGCTATAGCGGTGGGCCCAGTCAACTCTTCCTTGTGGACTTACGACAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR TCA 90 bp AGGTGGTTCTCTGCTTCACTGGCAGAACCACACAAGCTTATCCTAGAGAAAATCGCTGCTGCTGCTGCCTaGGAAGCTGGAAATGTGCAG +
Preference number: 4 (lower is better)
Translates to: RWFSASLAEPHKLILEKIAAAAA*EAGNVQ
Trigger: CTGCACATTTCCAGCTTCTCAGGCAGCAGCAGCAGC...GATTTTCTCTAGGATAAGCTTGTGTGGTTCTGCCAGTGAAGCAGAGAACCACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR GCA 90 bp TGGGGGAGGCCACTGTTGGCTGCTCTTTGGAATAACAATGCAATGACTGATCATCACGTTCTGCCCGGTTaGAGGGCTCCTATTCATCAG +
Preference number: 4 (lower is better)
Translates to: WGRPLLAALWNNNAMTDHHVLPG*RAPIHQ
Trigger: CTGATGAATAGGAGCCCTGCAACCGGGCAGAACGTG...ATGATCAGTCATTGCATTGTTATTCCAAAGAGCAGCCAACAGTGGCCTCCCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR GCA 90 bp AACACACTATGTCAAATACCAGCTTCCCCCGAAAACTGGAGATGCGTCTTGAGTGTGGAGGGCATCGCCTaGTGCCTCTTAAACAGGTCC +
Preference number: 4 (lower is better)
Translates to: NTLCQIPASPENWRCVLSVEGIA*CLLNRS
Trigger: GGACCTGTTTAAGAGGCAGCAGGCGATGCCCTCCAC...ACTCAAGACGCATCTCCAGTTTTCGGGGGAAGCTGGTATTTGACATAGTGTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR GCA 90 bp AACACACTATGTCAAATACCAGCTTCCCCCGAAAACTGGAGATGCGTCTTGAGTTGGGCCTCTACCACTTaGGGCTGCTGTGCAAACTGC +
Preference number: 4 (lower is better)
Translates to: NTLCQIPASPENWRCVLSWASTT*GCCANC
Trigger: GCAGTTTGCACAGCAGCCGCAAGTGGTAGAGGCCCA...ACTCAAGACGCATCTCCAGTTTTCGGGGGAAGCTGGTATTTGACATAGTGTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR GCA 90 bp ATTATATCTTTCCCAGTGCTGAATCTCTTGCGTGACATGGTCCCAAGGTTCACTGGCGGCTGCGAGGTCTaGACTTGCACTTGGGCTGTT +
Preference number: 4 (lower is better)
Translates to: IISFPVLNLLRDMVPRFTGGCEV*TCTWAV
Trigger: AACAGCCCAAGTGCAAGTGCAGACCTCGCAGCCGCC...AGTGAACCTTGGGACCATGTCACGCAAGAGATTCAGCACTGGGAAAGATATAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR GCA 90 bp GCCAAAATCAAGCCACAGCACAAAGGATACTATTGGATATGGACCTTTTTGCTTGCCTGGGTCTGCATCTaGCCTTGCGCCTGCAGGAGC +
Preference number: 4 (lower is better)
Translates to: AKIKPQHKGYYWIWTFLLAWVCI*PCACRS
Trigger: GCTCCTGCAGGCGCAAGGGCAGATGCAGACCCAGGC...AAGCAAAAAGGTCCATATCCAATAGTATCCTTTGTGCTGTGGCTTGATTTTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330386.7
CDS-3UTR GCA 90 bp CTGTTTAACACACTATGTCAAATACCAGCTTCCCCCGAAAACTGGAGATGCGTCCACGGTCTGTCCTGCTaGCTTCTGTGGCTGACCGAT +
Preference number: 4 (lower is better)
Translates to: LFNTLCQIPASPENWRCVHGLSC*LLWLTD
Trigger: ATCGGTCAGCCACAGAAGGCAGCAGGACAGACCGTG...GACGCATCTCCAGTTTTCGGGGGAAGCTGGTATTTGACATAGTGTGTTAAACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR GCA 90 bp GCCAAAATCAAGCCACAGCACAAAGGATACTATTGGATATGGACCTTTTTGCTTAGCAGCTGCTGCATGTaGACGGGCTGGGCCACCACG +
Preference number: 4 (lower is better)
Translates to: AKIKPQHKGYYWIWTFLLSSCCM*TGWATT
Trigger: CGTGGTGGCCCAGCCCGTGCACATGCAGCAGCTGCT...AAGCAAAAAGGTCCATATCCAATAGTATCCTTTGTGCTGTGGCTTGATTTTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR GCA 90 bp TACTTTTCTCCACATTTCTTATCAAGAGCTCAAGTGAGCTCCCCAGTTGATTTCACCTGGATCTGGGTCTaGACTTGCTGGGCCCCGGCC +
Preference number: 4 (lower is better)
Translates to: YFSPHFLSRAQVSSPVDFTWIWV*TCWAPA
Trigger: GGCCGGGGCCCAGCAAGTGCAGACCCAGATCCAGGT...GAAATCAACTGGGGAGCTCACTTGAGCTCTTGATAAGAAATGTGGAGAAAAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR GCA 90 bp CGTGACATGGTCCCAAGGTTCACTAATAAAGCGTTTTCTGTGAGGAAGGTAGTTGGCAGTCGCGGTCACTaGAGGGATCATCTGCACCTG +
Preference number: 4 (lower is better)
Translates to: RDMVPRFTNKAFSVRKVVGSRGH*RDHLHL
Trigger: CAGGTGCAGATGATCCCTGCAGTGACCGCGACTGCC...AACTACCTTCCTCACAGAAAACGCTTTATTAGTGAACCTTGGGACCATGTCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR GCA 90 bp CGTGACATGGTCCCAAGGTTCACTAATAAAGCGTTTTCTGTGAGGAAGGTAGTTGATGAGAGGCAGCCCTaGTGCCCTGACTACTGGCAC +
Preference number: 4 (lower is better)
Translates to: RDMVPRFTNKAFSVRKVVDERQP*CPDYWH
Trigger: GTGCCAGTAGTCAGGGCAGCAGGGCTGCCTCTCATC...AACTACCTTCCTCACAGAAAACGCTTTATTAGTGAACCTTGGGACCATGTCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR GCA 90 bp CTGATCATTTCCCTTGAACACAGGCCAGGAACGTGCCTTGTGTGTTTAGGTGGGCTGCTTCCCGCCAGGTaGTTTAAAAACAGTCTGGCT +
Preference number: 4 (lower is better)
Translates to: LIISLEHRPGTCLVCLGGLLPAR*FKNSLA
Trigger: AGCCAGACTGTTTTTAAAGCACCTGGCGGGAAGCAG...CCCACCTAAACACACAAGGCACGTTCCTGGCCTGTGTTCAAGGGAAATGATCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR GCA 90 bp CTATGTCAAATACCAGCTTCCCCCGAAAACTGGAGATGCGTCTTGAGTGCACTGAGACGTTGTTGGCTCTaGAGGGTGAAAACCGCTTCC +
Preference number: 4 (lower is better)
Translates to: LCQIPASPENWRCVLSALRRCWL*RVKTAS
Trigger: GGAAGCGGTTTTCACCCTGCAGAGCCAACAACGTCT...CAGTGCACTCAAGACGCATCTCCAGTTTTCGGGGGAAGCTGGTATTTGACATAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR GCA 90 bp TTTCCAACTCTTACTTGCCGTATTGGAATGAACCCAGATTCACAAGGGGAAGGCTGGTTGCAGATGCGCTaGAGCCGCACAAGGATGCTC +
Preference number: 4 (lower is better)
Translates to: FPTLTCRIGMNPDSQGEGWLQMR*SRTRML
Trigger: GAGCATCCTTGTGCGGCTGCAGCGCATCTGCAACCA...GCCTTCCCCTTGTGAATCTGGGTTCATTCCAATACGGCAAGTAAGAGTTGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR GCA 90 bp CGTGACATGGTCCCAAGGTTCACTAATAAAGCGTTTTCTGTGAGGAAGGTAGTTCAGGGTGGTTGCAGATaGGCTGCAGCCGCACAAGGA +
Preference number: 4 (lower is better)
Translates to: RDMVPRFTNKAFSVRKVVQGGCR*AAAAQG
Trigger: TCCTTGTGCGGCTGCAGCGCATCTGCAACCACCCTG...AACTACCTTCCTCACAGAAAACGCTTTATTAGTGAACCTTGGGACCATGTCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR GCA 90 bp TCCATTGTATGCTCCTCACACACGGCAGACGGCTTCTGTGGCGTGCAAAGCACTCTTAGACAGCAACTCTaGCTCGTGACGAGTGATTTT +
Preference number: 4 (lower is better)
Translates to: SIVCSSHTADGFCGVQSTLRQQL*LVTSDF
Trigger: AAAATCACTCGTCACGAGGCAGAGTTGCTGTCTAAG...AGTGCTTTGCACGCCACAGAAGCCGTCTGCCGTGTGTGAGGAGCATACAATGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR GCA 90 bp CAAGCCACAGCACAAAGGATACTATTGGATATGGACCTTTTTGCTTTGGTGAAATGGGGAAAGCCACGGTaGGACCCTCGGGCTTCTGGC +
Preference number: 4 (lower is better)
Translates to: QATAQRILLDMDLFALVKWGKPR*DPRASG
Trigger: GCCAGAAGCCCGAGGGTCGCACCGTGGCTTTCCCCA...TTTCACCAAAGCAAAAAGGTCCATATCCAATAGTATCCTTTGTGCTGTGGCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR GCA 90 bp AAAGAACTAAACTCTGGCAGACACTGTGGAAGCCCACGCCTTATCTTTAGAAAGGGTCTGAAACGGGGCTaGTGCTGCTTTTGCCTCCGG +
Preference number: 4 (lower is better)
Translates to: KELNSGRHCGSPRLIFRKGLKRG*CCFCLR
Trigger: CCGGAGGCAAAAGCAGCAGCAGCCCCGTTTCAGACC...CTTTCTAAAGATAAGGCGTGGGCTTCCACAGTGTCTGCCAGAGTTTAGTTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR GCA 90 bp CTATGTCAAATACCAGCTTCCCCCGAAAACTGGAGATGCGTCTTGAGTGCACTGTTTTGCGATTCGCTCTaGACGGAGAGATGCCACCTG +
Preference number: 4 (lower is better)
Translates to: LCQIPASPENWRCVLSALFCDSL*TERCHL
Trigger: CAGGTGGCATCTCTCCGTGCAGAGCGAATCGCAAAA...CAGTGCACTCAAGACGCATCTCCAGTTTTCGGGGGAAGCTGGTATTTGACATAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR GCA 90 bp TTTCCAACTCTTACTTGCCGTATTGGAATGAACCCAGATTCACAAGGGGAAGGCGTCGTCGTCGTCTGTTaGTGCTGCTGCTGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: FPTLTCRIGMNPDSQGEGVVVVC*CCCCCC
Trigger: GCAGCAACAGCAGCAGCAGCAACAGACGACGACGAC...GCCTTCCCCTTGTGAATCTGGGTTCATTCCAATACGGCAAGTAAGAGTTGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CCA 90 bp CAAGCCACAGCACAAAGGATACTATTGGATATGGACCTTTTTGCTTTGGTGAAACCAGGTGTGGGAACGTaGAGGGCCAGCTGTGCAGGC +
Preference number: 4 (lower is better)
Translates to: QATAQRILLDMDLFALVKPGVGT*RASCAG
Trigger: GCCTGCACAGCTGGCCCTCCACGTTCCCACACCTGG...TTTCACCAAAGCAAAAAGGTCCATATCCAATAGTATCCTTTGTGCTGTGGCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CCA 90 bp TTTCCAACTCTTACTTGCCGTATTGGAATGAACCCAGATTCACAAGGGGAAGGCCAGGACTCTGTGGTTTaGTGGGGGCAGATGCCACCA +
Preference number: 4 (lower is better)
Translates to: FPTLTCRIGMNPDSQGEGQDSVV*WGQMPP
Trigger: TGGTGGCATCTGCCCCCACCAAACCACAGAGTCCTG...GCCTTCCCCTTGTGAATCTGGGTTCATTCCAATACGGCAAGTAAGAGTTGGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CCA 90 bp TCTGGCAGACACTGTGGAAGCCCACGCCTTATCTTTAGAAAGTCCATTGTATGCTTTGCAACCTGGATCTaGGTCTGCACTTGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: SGRHCGSPRLIFRKSIVCFATWI*VCTCWA
Trigger: GGCCCAGCAAGTGCAGACCCAGATCCAGGTTGCAAA...GCATACAATGGACTTTCTAAAGATAAGGCGTGGGCTTCCACAGTGTCTGCCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CCA 90 bp AACACACTATGTCAAATACCAGCTTCCCCCGAAAACTGGAGATGCGTCTTGAGTGCAGAGGCAACTTGCTaGATGCTGGCCACGGGTGTT +
Preference number: 4 (lower is better)
Translates to: NTLCQIPASPENWRCVLSAEATC*MLATGV
Trigger: AACACCCGTGGCCAGCATCCAGCAAGTTGCCTCTGC...ACTCAAGACGCATCTCCAGTTTTCGGGGGAAGCTGGTATTTGACATAGTGTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CCA 90 bp TGGGGGAGGCCACTGTTGGCTGCTCTTTGGAATAACAATGCAATGACTGATCATGGCAGACGGCTTCTGTaGCGTGCAAAGCACTACATG +
Preference number: 4 (lower is better)
Translates to: WGRPLLAALWNNNAMTDHGRRLL*RAKHYM
Trigger: CATGTAGTGCTTTGCACGCCACAGAAGCCGTCTGCC...ATGATCAGTCATTGCATTGTTATTCCAAAGAGCAGCCAACAGTGGCCTCCCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CCA 90 bp CTATGTCAAATACCAGCTTCCCCCGAAAACTGGAGATGCGTCTTGAGTGCACTGGGGGGAGGCCACTGTTaGCTGCTCTTTGGAATAACA +
Preference number: 4 (lower is better)
Translates to: LCQIPASPENWRCVLSALGGGHC*LLFGIT
Trigger: TGTTATTCCAAAGAGCAGCCAACAGTGGCCTCCCCC...CAGTGCACTCAAGACGCATCTCCAGTTTTCGGGGGAAGCTGGTATTTGACATAG
51% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CCA 90 bp CAGCACAGGTGGTTCTCTGCTTCACTGGCAGAACCACACAAGCTTATCCTAGAGAGTAAAAGTTTCCACTaGGAGCCAGATGTGAGGCGC +
Preference number: 4 (lower is better)
Translates to: QHRWFSASLAEPHKLILESKSFH*EPDVRR
Trigger: GCGCCTCACATCTGGCTCCCAGTGGAAACTTTTACT...CTCTAGGATAAGCTTGTGTGGTTCTGCCAGTGAAGCAGAGAACCACCTGTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CCA 90 bp GCCAAAATCAAGCCACAGCACAAAGGATACTATTGGATATGGACCTTTTTGCTTCAGAGAACGTGGCGATaGGCGGCCGTCCTCGAAGCG +
Preference number: 4 (lower is better)
Translates to: AKIKPQHKGYYWIWTFLLQRTWR*AAVLEA
Trigger: CGCTTCGAGGACGGCCGCCCATCGCCACGTTCTCTG...AAGCAAAAAGGTCCATATCCAATAGTATCCTTTGTGCTGTGGCTTGATTTTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CCA 90 bp AACACACTATGTCAAATACCAGCTTCCCCCGAAAACTGGAGATGCGTCTTGAGTGTGAACTTGCTGCCCTaGAACTGCAGTGTCACCGGC +
Preference number: 4 (lower is better)
Translates to: NTLCQIPASPENWRCVLSVNLLP*NCSVTG
Trigger: GCCGGTGACACTGCAGTTCCAGGGCAGCAAGTTCAC...ACTCAAGACGCATCTCCAGTTTTCGGGGGAAGCTGGTATTTGACATAGTGTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CCA 90 bp AGGTGGTTCTCTGCTTCACTGGCAGAACCACACAAGCTTATCCTAGAGAAAATCCTGGTCTTTTCCTCCTaGGTCGGCCCTCCAATGGGA +
Preference number: 4 (lower is better)
Translates to: RWFSASLAEPHKLILEKILVFSS*VGPPMG
Trigger: TCCCATTGGAGGGCCGACCCAGGAGGAAAAGACCAG...GATTTTCTCTAGGATAAGCTTGTGTGGTTCTGCCAGTGAAGCAGAGAACCACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CCA 90 bp TCTGGCAGACACTGTGGAAGCCCACGCCTTATCTTTAGAAAGTCCATTGTATGCGGGCAGCTTAGCCTCTaGGATGGGAGTGGCTTCATA +
Preference number: 4 (lower is better)
Translates to: SGRHCGSPRLIFRKSIVCGQLSL*DGSGFI
Trigger: TATGAAGCCACTCCCATCCCAGAGGCTAAGCTGCCC...GCATACAATGGACTTTCTAAAGATAAGGCGTGGGCTTCCACAGTGTCTGCCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CCA 90 bp AACACACTATGTCAAATACCAGCTTCCCCCGAAAACTGGAGATGCGTCTTGAGTAAGTTGGCAGGGGCTTaGCGAATGGCACCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: NTLCQIPASPENWRCVLSKLAGA*RMAPAA
Trigger: AGCAGCAGGTGCCATTCGCCAAGCCCCTGCCAACTT...ACTCAAGACGCATCTCCAGTTTTCGGGGGAAGCTGGTATTTGACATAGTGTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CCA 90 bp ACGCCTTCCACAACAGCACAGGTGGTTCTCTGCTTCACTGGCAGAACCACACAACTTCCCCTCCTCTCGTaGAATGATGACATTCTCGTA +
Preference number: 4 (lower is better)
Translates to: TPSTTAQVVLCFTGRTTQLPLLS*NDDILV
Trigger: TACGAGAATGTCATCATTCCACGAGAGGAGGGGAAG...TTGTGTGGTTCTGCCAGTGAAGCAGAGAACCACCTGTGCTGTTGTGGAAGGCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CCA 90 bp AGAGGAAGCCATGTTGTCACTTTTTCCATGAGCCACGTAGTACAGAGAACGCGGTGGCTCGTGTACAGCTaGGTGTGTGTGGCATTCTCA +
Preference number: 4 (lower is better)
Translates to: RGSHVVTFSMSHVVQRTRWLVYS*VCVAFS
Trigger: TGAGAATGCCACACACACCCAGCTGTACACGAGCCA...CCGCGTTCTCTGTACTACGTGGCTCATGGAAAAAGTGACAACATGGCTTCCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CCA 90 bp CAGCACAGGTGGTTCTCTGCTTCACTGGCAGAACCACACAAGCTTATCCTAGAGACACAGACGCGTGCTTaGGGTTCTTCTGAAAGGGAT +
Preference number: 4 (lower is better)
Translates to: QHRWFSASLAEPHKLILETQTRA*GSSERD
Trigger: ATCCCTTTCAGAAGAACCCCAAGCACGCGTCTGTGT...CTCTAGGATAAGCTTGTGTGGTTCTGCCAGTGAAGCAGAGAACCACCTGTGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CCA 90 bp AGGTGGTTCTCTGCTTCACTGGCAGAACCACACAAGCTTATCCTAGAGAAAATCGAGATGCCACCTGGATaGGAGGCAGCGGCTTGTCAT +
Preference number: 4 (lower is better)
Translates to: RWFSASLAEPHKLILEKIEMPPG*EAAACH
Trigger: ATGACAAGCCGCTGCCTCCCATCCAGGTGGCATCTC...GATTTTCTCTAGGATAAGCTTGTGTGGTTCTGCCAGTGAAGCAGAGAACCACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CCA 90 bp AGGTGGTTCTCTGCTTCACTGGCAGAACCACACAAGCTTATCCTAGAGAAAATCGGAGCTGAACTCCTGTaGCTTGGGACACTTGGGGCA +
Preference number: 4 (lower is better)
Translates to: RWFSASLAEPHKLILEKIGAELL*LGTLGA
Trigger: TGCCCCAAGTGTCCCAAGCCACAGGAGTTCAGCTCC...GATTTTCTCTAGGATAAGCTTGTGTGGTTCTGCCAGTGAAGCAGAGAACCACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR TCA 90 bp CTGTTTAACACACTATGTCAAATACCAGCTTCCCCCGAAAACTGGAGATGCGTCGGAACATTGGGCTGCTaGGTCTTCACCGGGATTTGG +
Preference number: 4 (lower is better)
Translates to: LFNTLCQIPASPENWRCVGTLGC*VFTGIW
Trigger: CCAAATCCCGGTGAAGACTCAGCAGCCCAATGTTCC...GACGCATCTCCAGTTTTCGGGGGAAGCTGGTATTTGACATAGTGTGTTAAACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR TCA 90 bp CAGCACAGGTGGTTCTCTGCTTCACTGGCAGAACCACACAAGCTTATCCTAGAGTGCCTTATTGGTGGCTaGGGAAGGTCTATTTACTGG +
Preference number: 4 (lower is better)
Translates to: QHRWFSASLAEPHKLILECLIGG*GRSIYW
Trigger: CCAGTAAATAGACCTTCCTCAGCCACCAATAAGGCA...CTCTAGGATAAGCTTGTGTGGTTCTGCCAGTGAAGCAGAGAACCACCTGTGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR TCA 90 bp AACCCATCTCGGATGATTGACTTTAGACAGGCCTTCCCCTCTGCGAAGACCACGTCTTCCAGACATTCCTaGATCCAGAGAACTTTCCTG +
Preference number: 4 (lower is better)
Translates to: NPSRMIDFRQAFPSAKTTSSRHS*IQRTFL
Trigger: CAGGAAAGTTCTCTGGATTCAGGAATGTCTGGAAGA...CGTGGTCTTCGCAGAGGGGAAGGCCTGTCTAAAGTCAATCATCCGAGATGGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR TCA 90 bp AACCCATCTCGGATGATTGACTTTAGACAGGCCTTCCCCTCTGCGAAGACCACGCAATGTCACTTAAAGTaGGAGAATGGGGAGGAAGCA +
Preference number: 4 (lower is better)
Translates to: NPSRMIDFRQAFPSAKTTQCHLK*ENGEEA
Trigger: TGCTTCCTCCCCATTCTCTCACTTTAAGTGACATTG...CGTGGTCTTCGCAGAGGGGAAGGCCTGTCTAAAGTCAATCATCCGAGATGGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR TCA 90 bp AACCCATCTCGGATGATTGACTTTAGACAGGCCTTCCCCTCTGCGAAGACCACGTATCACATCTGCGGATaGGGAGGAGTAAAAGTTTCC +
Preference number: 4 (lower is better)
Translates to: NPSRMIDFRQAFPSAKTTYHICG*GGVKVS
Trigger: GGAAACTTTTACTCCTCCTCATCCGCAGATGTGATA...CGTGGTCTTCGCAGAGGGGAAGGCCTGTCTAAAGTCAATCATCCGAGATGGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR TCA 90 bp AGGTGGTTCTCTGCTTCACTGGCAGAACCACACAAGCTTATCCTAGAGAAAATCTCGCCAATTAGAGTCTaGCAGTGTTCGGGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: RWFSASLAEPHKLILEKISPIRV*QCSGCC
Trigger: GCAGCAGCCCGAACACTGTCAGACTCTAATTGGCGA...GATTTTCTCTAGGATAAGCTTGTGTGGTTCTGCCAGTGAAGCAGAGAACCACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR TCA 90 bp AGGTGGTTCTCTGCTTCACTGGCAGAACCACACAAGCTTATCCTAGAGAAAATCGGATGCTCAGGACGTTaGCAAAGTGCCCGCTCTTCA +
Preference number: 4 (lower is better)
Translates to: RWFSASLAEPHKLILEKIGCSGR*QSARSS
Trigger: TGAAGAGCGGGCACTTTGTCAACGTCCTGAGCATCC...GATTTTCTCTAGGATAAGCTTGTGTGGTTCTGCCAGTGAAGCAGAGAACCACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR TCA 90 bp TACTTTTCTCCACATTTCTTATCAAGAGCTCAAGTGAGCTCCCCAGTTGATTTCCCGGAGCTGGCTGTGTaGCAGGGTGAACTTGCTGCC +
Preference number: 4 (lower is better)
Translates to: YFSPHFLSRAQVSSPVDFPELAV*QGELAA
Trigger: GGCAGCAAGTTCACCCTGTCACACAGCCAGCTCCGG...GAAATCAACTGGGGAGCTCACTTGAGCTCTTGATAAGAAATGTGGAGAAAAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR TCA 90 bp TACTTTTCTCCACATTTCTTATCAAGAGCTCAAGTGAGCTCCCCAGTTGATTTCACGACCGCCTCCCCGTaGCGCTGCTTCTTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: YFSPHFLSRAQVSSPVDFTTASP*RCFFFL
Trigger: CAGGAAGAAGAAGCAGCGTCACGGGGAGGCGGTCGT...GAAATCAACTGGGGAGCTCACTTGAGCTCTTGATAAGAAATGTGGAGAAAAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR TCA 90 bp AGAGGAAGCCATGTTGTCACTTTTTCCATGAGCCACGTAGTACAGAGAACGCGGTGCTTGGGGTTCTTCTaGAAGGGATTCATGCCAAGC +
Preference number: 4 (lower is better)
Translates to: RGSHVVTFSMSHVVQRTRCLGFF*KGFMPS
Trigger: GCTTGGCATGAATCCCTTTCAGAAGAACCCCAAGCA...CCGCGTTCTCTGTACTACGTGGCTCATGGAAAAAGTGACAACATGGCTTCCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR TCA 90 bp CAGCACAGGTGGTTCTCTGCTTCACTGGCAGAACCACACAAGCTTATCCTAGAGGCGGCTTGTCATAGTTaGTTCCACTTTCTGCCAACA +
Preference number: 4 (lower is better)
Translates to: QHRWFSASLAEPHKLILEAACHS*FHFLPT
Trigger: TGTTGGCAGAAAGTGGAATCAACTATGACAAGCCGC...CTCTAGGATAAGCTTGTGTGGTTCTGCCAGTGAAGCAGAGAACCACCTGTGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR TCA 90 bp TTTCCAACTCTTACTTGCCGTATTGGAATGAACCCAGATTCACAAGGGGAAGGCGTTTTTCCAGGGAGCTaGACTCCTGTGGCTTGGGAC +
Preference number: 4 (lower is better)
Translates to: FPTLTCRIGMNPDSQGEGVFPGS*TPVAWD
Trigger: GTCCCAAGCCACAGGAGTTCAGCTCCCTGGAAAAAC...GCCTTCCCCTTGTGAATCTGGGTTCATTCCAATACGGCAAGTAAGAGTTGGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR TCA 90 bp CTATGTCAAATACCAGCTTCCCCCGAAAACTGGAGATGCGTCTTGAGTGCACTGGGAAATGTGCAGGTGTaGTGGTTTTTCCAGGGAGCT +
Preference number: 4 (lower is better)
Translates to: LCQIPASPENWRCVLSALGNVQV*WFFQGA
Trigger: AGCTCCCTGGAAAAACCATCACACCTGCACATTTCC...CAGTGCACTCAAGACGCATCTCCAGTTTTCGGGGGAAGCTGGTATTTGACATAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR GCA 90 bp ATAGTCTGTGTTCTCAAAGTTTCCAACTCTTACTTGCCGTATTGGAATGAACCCTGCTGCTGCGGCGGCTaGGAGGTCTGCACTTGCACT +
Preference number: 4 (lower is better)
Translates to: IVCVLKVSNSYLPYWNEPCCCGG*EVCTCT
Trigger: AGTGCAAGTGCAGACCTCGCAGCCGCCGCAGCAGCA...GGGTTCATTCCAATACGGCAAGTAAGAGTTGGAAACTTTGAGAACACAGACTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR GCA 90 bp AACACACTATGTCAAATACCAGCTTCCCCCGAAAACTGGAGATGCGTCTTGAGTATCTGTAACTTGGGCTaGTGGCTTGGGCTGTCGGAG +
Preference number: 4 (lower is better)
Translates to: NTLCQIPASPENWRCVLSICNLG*WLGLSE
Trigger: CTCCGACAGCCCAAGCCAGCAGCCCAAGTTACAGAT...ACTCAAGACGCATCTCCAGTTTTCGGGGGAAGCTGGTATTTGACATAGTGTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR GCA 90 bp ATTATATCTTTCCCAGTGCTGAATCTCTTGCGTGACATGGTCCCAAGGTTCACTAGTGCCTCTCGGTCATaGCCTTCACGCGCTGCATCT +
Preference number: 4 (lower is better)
Translates to: IISFPVLNLLRDMVPRFTSASRS*PSRAAS
Trigger: AGATGCAGCGCGTGAAGGGCATGACCGAGAGGCACT...AGTGAACCTTGGGACCATGTCACGCAAGAGATTCAGCACTGGGAAAGATATAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR GCA 90 bp CTGTTTAACACACTATGTCAAATACCAGCTTCCCCCGAAAACTGGAGATGCGTCAAAACCGCTTCCCAGTaGCTCTCGGTCATGCCCTTC +
Preference number: 4 (lower is better)
Translates to: LFNTLCQIPASPENWRCVKTASQ*LSVMPF
Trigger: GAAGGGCATGACCGAGAGGCACTGGGAAGCGGTTTT...GACGCATCTCCAGTTTTCGGGGGAAGCTGGTATTTGACATAGTGTGTTAAACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR GCA 90 bp AACACACTATGTCAAATACCAGCTTCCCCCGAAAACTGGAGATGCGTCTTGAGTAGGACGTTGACAAAGTaGCCGCTCTTCAAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: NTLCQIPASPENWRCVLSRTLTK*PLFKAS
Trigger: GGAGGCCTTGAAGAGCGGGCACTTTGTCAACGTCCT...ACTCAAGACGCATCTCCAGTTTTCGGGGGAAGCTGGTATTTGACATAGTGTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR GCA 90 bp ATAGTCTGTGTTCTCAAAGTTTCCAACTCTTACTTGCCGTATTGGAATGAACCCGCTGGCCTTCAGCTTTaGTGCTGCTGGTCGGGCTGC +
Preference number: 4 (lower is better)
Translates to: IVCVLKVSNSYLPYWNEPAGLQL*CCWSGC
Trigger: GCAGCCCGACCAGCAGCAGCAAAGCTGAAGGCCAGC...GGGTTCATTCCAATACGGCAAGTAAGAGTTGGAAACTTTGAGAACACAGACTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR GCA 90 bp CTGATCATTTCCCTTGAACACAGGCCAGGAACGTGCCTTGTGTGTTTAGGTGGGTGGTCCTGTGATGGATaGCAGCTGAGCTATTTTCAC +
Preference number: 4 (lower is better)
Translates to: LIISLEHRPGTCLVCLGGWSCDG*QLSYFH
Trigger: GTGAAAATAGCTCAGCTGGCATCCATCACAGGACCA...CCCACCTAAACACACAAGGCACGTTCCTGGCCTGTGTTCAAGGGAAATGATCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR GCA 90 bp TCTCCACATTTCTTATCAAGAGCTCAAGTGAGCTCCCCAGTTGATTTCACTGACTTGCTGCCCTGGAACTaGAGTGTCACCGGCGTCTCT +
Preference number: 4 (lower is better)
Translates to: SPHFLSRAQVSSPVDFTDLLPWN*SVTGVS
Trigger: AGAGACGCCGGTGACACTGCAGTTCCAGGGCAGCAA...GTCAGTGAAATCAACTGGGGAGCTCACTTGAGCTCTTGATAAGAAATGTGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR GCA 90 bp CGTGACATGGTCCCAAGGTTCACTAATAAAGCGTTTTCTGTGAGGAAGGTAGTTCAGAAGTCCTGGTGTTaGGCGGTCAAACAGGGACCG +
Preference number: 4 (lower is better)
Translates to: RDMVPRFTNKAFSVRKVVQKSWC*AVKQGP
Trigger: CGGTCCCTGTTTGACCGCGCAACACCAGGACTTCTG...AACTACCTTCCTCACAGAAAACGCTTTATTAGTGAACCTTGGGACCATGTCACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR GCA 90 bp ACGCCTTCCACAACAGCACAGGTGGTTCTCTGCTTCACTGGCAGAACCACACAATTGGGGGACTCCTCTTaGCAGCAGTCATTTTCATTA +
Preference number: 4 (lower is better)
Translates to: TPSTTAQVVLCFTGRTTQLGDSS*QQSFSL
Trigger: TAATGAAAATGACTGCTGGCAAGAGGAGTCCCCCAA...TTGTGTGGTTCTGCCAGTGAAGCAGAGAACCACCTGTGCTGTTGTGGAAGGCGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CCA 90 bp AGGTGGTTCTCTGCTTCACTGGCAGAACCACACAAGCTTATCCTAGAGAAAATCATTTGGAGCTGTGTCTaGGCCTCTACCACTTGCGGC +
Preference number: 4 (lower is better)
Translates to: RWFSASLAEPHKLILEKIIWSCV*ASTTCG
Trigger: GCCGCAAGTGGTAGAGGCCCAGACACAGCTCCAAAT...GATTTTCTCTAGGATAAGCTTGTGTGGTTCTGCCAGTGAAGCAGAGAACCACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CCA 90 bp TTTCCAACTCTTACTTGCCGTATTGGAATGAACCCAGATTCACAAGGGGAAGGCGGTGTGGTAAGAAACTaGGTCTTAAGGGCCGGCTGC +
Preference number: 4 (lower is better)
Translates to: FPTLTCRIGMNPDSQGEGGVVRN*VLRAGC
Trigger: GCAGCCGGCCCTTAAGACCCAGTTTCTTACCACACC...GCCTTCCCCTTGTGAATCTGGGTTCATTCCAATACGGCAAGTAAGAGTTGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CCA 90 bp AGGTGGTTCTCTGCTTCACTGGCAGAACCACACAAGCTTATCCTAGAGAAAATCTGTGGAGAAGCCTGCTaGGAAGCAGAGGCAACTTGC +
Preference number: 4 (lower is better)
Translates to: RWFSASLAEPHKLILEKICGEAC*EAEATC
Trigger: GCAAGTTGCCTCTGCTTCCCAGCAGGCTTCTCCACA...GATTTTCTCTAGGATAAGCTTGTGTGGTTCTGCCAGTGAAGCAGAGAACCACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CCA 90 bp TATGGACCTTTTTGCTTTGGTGAAAACTTCAAAGTAAGGAGACACTGTCAATCAGCGGGGCCGACGCCGTaGTCACCACCTGCTGCTGAA +
Preference number: 4 (lower is better)
Translates to: YGPFCFGENFKVRRHCQSAGPTP*SPPAAE
Trigger: TTCAGCAGCAGGTGGTGACCACGGCGTCGGCCCCGC...TGATTGACAGTGTCTCCTTACTTTGAAGTTTTCACCAAAGCAAAAAGGTCCATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CCA 90 bp CGTGACATGGTCCCAAGGTTCACTAATAAAGCGTTTTCTGTGAGGAAGGTAGTTTGTAACTTGGGCTGCTaGCTTGGGCTGTCGGAGCTG +
Preference number: 4 (lower is better)
Translates to: RDMVPRFTNKAFSVRKVVCNLGC*LGLSEL
Trigger: CAGCTCCGACAGCCCAAGCCAGCAGCCCAAGTTACA...AACTACCTTCCTCACAGAAAACGCTTTATTAGTGAACCTTGGGACCATGTCACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CCA 90 bp AGGTGGTTCTCTGCTTCACTGGCAGAACCACACAAGCTTATCCTAGAGAAAATCTGCTGCCCTGACTACTaGCACGGAGGCTTAGTAGGT +
Preference number: 4 (lower is better)
Translates to: RWFSASLAEPHKLILEKICCPDY*HGGLVG
Trigger: ACCTACTAAGCCTCCGTGCCAGTAGTCAGGGCAGCA...GATTTTCTCTAGGATAAGCTTGTGTGGTTCTGCCAGTGAAGCAGAGAACCACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CCA 90 bp CCTCATCGTACCCTCAGCTGTGACATCTGTACTACCATTGCCTCTGCGTGGTCCATCTCTTGCGTGACATaGTCCCAAGGTTCACTAATA +
Preference number: 4 (lower is better)
Translates to: PHRTLSCDICTTIASAWSISCVT*SQGSLI
Trigger: TATTAGTGAACCTTGGGACCATGTCACGCAAGAGAT...GGACCACGCAGAGGCAATGGTAGTACAGATGTCACAGCTGAGGGTACGATGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CCA 90 bp ATTATATCTTTCCCAGTGCTGAATCTCTTGCGTGACATGGTCCCAAGGTTCACTGCCTCACGCCAGCCATaGCAGAGTGTCCCAAAGGTT +
Preference number: 4 (lower is better)
Translates to: IISFPVLNLLRDMVPRFTASRQP*QSVPKV
Trigger: AACCTTTGGGACACTCTGCCATGGCTGGCGTGAGGC...AGTGAACCTTGGGACCATGTCACGCAAGAGATTCAGCACTGGGAAAGATATAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CCA 90 bp CTGATCATTTCCCTTGAACACAGGCCAGGAACGTGCCTTGTGTGTTTAGGTGGGGGTTCTCTGCTTCACTaGCAGAACCACACAAGCTTA +
Preference number: 4 (lower is better)
Translates to: LIISLEHRPGTCLVCLGGGSLLH*QNHTSL
Trigger: TAAGCTTGTGTGGTTCTGCCAGTGAAGCAGAGAACC...CCCACCTAAACACACAAGGCACGTTCCTGGCCTGTGTTCAAGGGAAATGATCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CCA 90 bp TCCCAGGGTCGCCAATTAGAGTCTGACAGTGTTCGGGCTGCTGCCTTTATAGTCGCTTTGAGTTCTCTGTaGCTGCCAATATATGAGAGG +
Preference number: 4 (lower is better)
Translates to: SQGRQLESDSVRAAAFIVALSSL*LPIYER
Trigger: CCTCTCATATATTGGCAGCCACAGAGAACTCAAAGC...GACTATAAAGGCAGCAGCCCGAACACTGTCAGACTCTAATTGGCGACCCTGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CCA 90 bp AAAGAACTAAACTCTGGCAGACACTGTGGAAGCCCACGCCTTATCTTTAGAAAGGACGTGATGCAGACGTaGAAGCTGTTGGGTTCGGCC +
Preference number: 4 (lower is better)
Translates to: KELNSGRHCGSPRLIFRKDVMQT*KLLGSA
Trigger: GGCCGAACCCAACAGCTTCCACGTCTGCATCACGTC...CTTTCTAAAGATAAGGCGTGGGCTTCCACAGTGTCTGCCAGAGTTTAGTTCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CCA 90 bp TCTCCACATTTCTTATCAAGAGCTCAAGTGAGCTCCCCAGTTGATTTCACTGACTGGGAGAAGCTGGTTTaGAGGCCGTTCCGGGTTCTC +
Preference number: 4 (lower is better)
Translates to: SPHFLSRAQVSSPVDFTDWEKLV*RPFRVL
Trigger: GAGAACCCGGAACGGCCTCCAAACCAGCTTCTCCCA...GTCAGTGAAATCAACTGGGGAGCTCACTTGAGCTCTTGATAAGAAATGTGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CCA 90 bp CGTGACATGGTCCCAAGGTTCACTAATAAAGCGTTTTCTGTGAGGAAGGTAGTTTCCAATGGGAGAAGCTaGTTTGGAGGCCGTTCCGGG +
Preference number: 4 (lower is better)
Translates to: RDMVPRFTNKAFSVRKVVSNGRS*FGGRSG
Trigger: CCCGGAACGGCCTCCAAACCAGCTTCTCCCATTGGA...AACTACCTTCCTCACAGAAAACGCTTTATTAGTGAACCTTGGGACCATGTCACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CCA 90 bp AGGTGGTTCTCTGCTTCACTGGCAGAACCACACAAGCTTATCCTAGAGAAAATCGTCTCTGCCATAGACTaGAGCTTGAGAACAGCGCCG +
Preference number: 4 (lower is better)
Translates to: RWFSASLAEPHKLILEKIVSAID*SLRTAP
Trigger: CGGCGCTGTTCTCAAGCTCCAGTCTATGGCAGAGAC...GATTTTCTCTAGGATAAGCTTGTGTGGTTCTGCCAGTGAAGCAGAGAACCACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CCA 90 bp ACGCCTTCCACAACAGCACAGGTGGTTCTCTGCTTCACTGGCAGAACCACACAAGCTAGCTCCTCTAATTaGGATGGTTCTTCATCACAC +
Preference number: 4 (lower is better)
Translates to: TPSTTAQVVLCFTGRTTQASSSN*DGSSSH
Trigger: GTGTGATGAAGAACCATCCCAATTAGAGGAGCTAGC...TTGTGTGGTTCTGCCAGTGAAGCAGAGAACCACCTGTGCTGTTGTGGAAGGCGT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CCA 90 bp GCTGTCGTAAGTCCACAAGGAAGAGTTGACTGGGCCCACCGCTATAGCCAATACTTCATTAAGTCAAAGTaGCTCGTGTACAGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: AVVSPQGRVDWAHRYSQYFIKSK*LVYSWV
Trigger: CACCCAGCTGTACACGAGCCACTTTGACTTAATGAA...GTATTGGCTATAGCGGTGGGCCCAGTCAACTCTTCCTTGTGGACTTACGACAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR TCA 90 bp TTTCCAACTCTTACTTGCCGTATTGGAATGAACCCAGATTCACAAGGGGAAGGCCAGTGCCATGGTGCATaGTCACCTCCCTTCTGTATC +
Preference number: 4 (lower is better)
Translates to: FPTLTCRIGMNPDSQGEGQCHGA*SPPFCI
Trigger: GATACAGAAGGGAGGTGATCATGCACCATGGCACTG...GCCTTCCCCTTGTGAATCTGGGTTCATTCCAATACGGCAAGTAAGAGTTGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR TCA 90 bp CGTGACATGGTCCCAAGGTTCACTAATAAAGCGTTTTCTGTGAGGAAGGTAGTTCTGGGGTCCGGGAAGTaGCTGGAGATAGTGCCTTAT +
Preference number: 4 (lower is better)
Translates to: RDMVPRFTNKAFSVRKVVLGSGK*LEIVPY
Trigger: ATAAGGCACTATCTCCAGTCACTTCCCGGACCCCAG...AACTACCTTCCTCACAGAAAACGCTTTATTAGTGAACCTTGGGACCATGTCACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR TCA 90 bp CAAGCCACAGCACAAAGGATACTATTGGATATGGACCTTTTTGCTTTGGTGAAATTCGTCCTGGCTCACTaGGCCCAGGCCTCATCGTAC +
Preference number: 4 (lower is better)
Translates to: QATAQRILLDMDLFALVKFVLAH*AQASSY
Trigger: GTACGATGAGGCCTGGGCTCAGTGAGCCAGGACGAA...TTTCACCAAAGCAAAAAGGTCCATATCCAATAGTATCCTTTGTGCTGTGGCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR TCA 90 bp TATGGACCTTTTTGCTTTGGTGAAAACTTCAAAGTAAGGAGACACTGTCAATCAACTGGGAGCCAGATGTaGGGCGCACACAGCGGCCCT +
Preference number: 4 (lower is better)
Translates to: YGPFCFGENFKVRRHCQSTGSQM*GAHSGP
Trigger: AGGGCCGCTGTGTGCGCCTCACATCTGGCTCCCAGT...TGATTGACAGTGTCTCCTTACTTTGAAGTTTTCACCAAAGCAAAAAGGTCCATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR TCA 90 bp CAGCACAGGTGGTTCTCTGCTTCACTGGCAGAACCACACAAGCTTATCCTAGAGTATCACATCTGCGGATaGGGAGGAGTAAAAGTTTCC +
Preference number: 4 (lower is better)
Translates to: QHRWFSASLAEPHKLILEYHICG*GGVKVS
Trigger: GGAAACTTTTACTCCTCCTCATCCGCAGATGTGATA...CTCTAGGATAAGCTTGTGTGGTTCTGCCAGTGAAGCAGAGAACCACCTGTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR TCA 90 bp TACTTTTCTCCACATTTCTTATCAAGAGCTCAAGTGAGCTCCCCAGTTGATTTCAGACCCTCACTGACGTaGGATCGGGGCGGAAACTCC +
Preference number: 4 (lower is better)
Translates to: YFSPHFLSRAQVSSPVDFRPSLT*DRGGNS
Trigger: GGAGTTTCCGCCCCGATCTCACGTCAGTGAGGGTCT...GAAATCAACTGGGGAGCTCACTTGAGCTCTTGATAAGAAATGTGGAGAAAAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR TCA 90 bp CTATGTCAAATACCAGCTTCCCCCGAAAACTGGAGATGCGTCTTGAGTGCACTGTCGGCAGCTTTGAACTaGTCCATGATGAAAAGCGAG +
Preference number: 4 (lower is better)
Translates to: LCQIPASPENWRCVLSALSAALN*SMMKSE
Trigger: CTCGCTTTTCATCATGGATCAGTTCAAAGCTGCCGA...CAGTGCACTCAAGACGCATCTCCAGTTTTCGGGGGAAGCTGGTATTTGACATAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR TCA 90 bp AACACACTATGTCAAATACCAGCTTCCCCCGAAAACTGGAGATGCGTCTTGAGTACTGAGTGTAGGACGTaGTGCAGACGTGGAAGCTGT +
Preference number: 4 (lower is better)
Translates to: NTLCQIPASPENWRCVLSTECRT*CRRGSC
Trigger: ACAGCTTCCACGTCTGCATCACGTCCTACACTCAGT...ACTCAAGACGCATCTCCAGTTTTCGGGGGAAGCTGGTATTTGACATAGTGTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR TCA 90 bp AAAGAACTAAACTCTGGCAGACACTGTGGAAGCCCACGCCTTATCTTTAGAAAGGCTGCATCTCATCAATaGCCAGGCACTTCCAGCGCA +
Preference number: 4 (lower is better)
Translates to: KELNSGRHCGSPRLIFRKAASHQ*PGTSSA
Trigger: TGCGCTGGAAGTGCCTGGTCATTGATGAGATGCAGC...CTTTCTAAAGATAAGGCGTGGGCTTCCACAGTGTCTGCCAGAGTTTAGTTCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR TCA 90 bp CAGCACAGGTGGTTCTCTGCTTCACTGGCAGAACCACACAAGCTTATCCTAGAGTGGAGATTTCCTCCATaGGTTTCCGCGGTATCTTTT +
Preference number: 4 (lower is better)
Translates to: QHRWFSASLAEPHKLILEWRFPP*VSAVSF
Trigger: AAAAGATACCGCGGAAACTCATGGAGGAAATCTCCA...CTCTAGGATAAGCTTGTGTGGTTCTGCCAGTGAAGCAGAGAACCACCTGTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR TCA 90 bp TACTTTTCTCCACATTTCTTATCAAGAGCTCAAGTGAGCTCCCCAGTTGATTTCACCGCTCGAACACCCTaGGTCGTTGCCATGGACACC +
Preference number: 4 (lower is better)
Translates to: YFSPHFLSRAQVSSPVDFTARTP*VVAMDT
Trigger: GGTGTCCATGGCAACGACTCAGGGTGTTCGAGCGGT...GAAATCAACTGGGGAGCTCACTTGAGCTCTTGATAAGAAATGTGGAGAAAAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR GCA 90 bp GCCAAAATCAAGCCACAGCACAAAGGATACTATTGGATATGGACCTTTTTGCTTGGGGCCAGTGTGATCTaGTGGTTTCCCCCGACGACA +
Preference number: 4 (lower is better)
Translates to: AKIKPQHKGYYWIWTFLLGASVI*WFPPTT
Trigger: TGTCGTCGGGGGAAACCAGCAGATCACACTGGCCCC...AAGCAAAAAGGTCCATATCCAATAGTATCCTTTGTGCTGTGGCTTGATTTTGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR GCA 90 bp CGTGACATGGTCCCAAGGTTCACTAATAAAGCGTTTTCTGTGAGGAAGGTAGTTGGTGGTGATCTGCTGTaGGGTGATCTTCTGCTGGAC +
Preference number: 4 (lower is better)
Translates to: RDMVPRFTNKAFSVRKVVGGDLL*GDLLLD
Trigger: GTCCAGCAGAAGATCACCGCACAGCAGATCACCACC...AACTACCTTCCTCACAGAAAACGCTTTATTAGTGAACCTTGGGACCATGTCACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR GCA 90 bp AAAGAACTAAACTCTGGCAGACACTGTGGAAGCCCACGCCTTATCTTTAGAAAGAGGCAACTTGCTGGATaGTGGCCACGGGTGTTTGCT +
Preference number: 4 (lower is better)
Translates to: KELNSGRHCGSPRLIFRKRQLAG*WPRVFA
Trigger: AGCAAACACCCGTGGCCAGCATCCAGCAAGTTGCCT...CTTTCTAAAGATAAGGCGTGGGCTTCCACAGTGTCTGCCAGAGTTTAGTTCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR GCA 90 bp ATTATATCTTTCCCAGTGCTGAATCTCTTGCGTGACATGGTCCCAAGGTTCACTAGGCAACTTGCTGGATaGTGGCCACGGGTGTTTGCT +
Preference number: 4 (lower is better)
Translates to: IISFPVLNLLRDMVPRFTRQLAG*WPRVFA
Trigger: AGCAAACACCCGTGGCCAGCATCCAGCAAGTTGCCT...AGTGAACCTTGGGACCATGTCACGCAAGAGATTCAGCACTGGGAAAGATATAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR GCA 90 bp AGGTGGTTCTCTGCTTCACTGGCAGAACCACACAAGCTTATCCTAGAGAAAATCACGGCTTCTGTGGCGTaGAAAGCACTACATGCTCAC +
Preference number: 4 (lower is better)
Translates to: RWFSASLAEPHKLILEKITASVA*KALHAH
Trigger: GTGAGCATGTAGTGCTTTGCACGCCACAGAAGCCGT...GATTTTCTCTAGGATAAGCTTGTGTGGTTCTGCCAGTGAAGCAGAGAACCACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR GCA 90 bp TCTCCACATTTCTTATCAAGAGCTCAAGTGAGCTCCCCAGTTGATTTCACTGACACAGGCCTTCCCCTCTaGGAAGACCACGAGGCATTT +
Preference number: 4 (lower is better)
Translates to: SPHFLSRAQVSSPVDFTDTGLPL*EDHEAF
Trigger: AAATGCCTCGTGGTCTTCGCAGAGGGGAAGGCCTGT...GTCAGTGAAATCAACTGGGGAGCTCACTTGAGCTCTTGATAAGAAATGTGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR GCA 90 bp ATTATATCTTTCCCAGTGCTGAATCTCTTGCGTGACATGGTCCCAAGGTTCACTTACTACCATTGCCTCTaGGTGGTCCTCTGGGCCTCA +
Preference number: 4 (lower is better)
Translates to: IISFPVLNLLRDMVPRFTYYHCL*VVLWAS
Trigger: TGAGGCCCAGAGGACCACGCAGAGGCAATGGTAGTA...AGTGAACCTTGGGACCATGTCACGCAAGAGATTCAGCACTGGGAAAGATATAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR GCA 90 bp TCTGGCAGACACTGTGGAAGCCCACGCCTTATCTTTAGAAAGTCCATTGTATGCCTGCTTCCCGCCAGGTaGTTTAAAAACAGTCTGGCT +
Preference number: 4 (lower is better)
Translates to: SGRHCGSPRLIFRKSIVCLLPAR*FKNSLA
Trigger: AGCCAGACTGTTTTTAAAGCACCTGGCGGGAAGCAG...GCATACAATGGACTTTCTAAAGATAAGGCGTGGGCTTCCACAGTGTCTGCCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR GCA 90 bp CTATGTCAAATACCAGCTTCCCCCGAAAACTGGAGATGCGTCTTGAGTGCACTGTCCTTAGCAAGTCTCTaGCATAGACTGGAGCTTGAG +
Preference number: 4 (lower is better)
Translates to: LCQIPASPENWRCVLSALSLASL*HRLELE
Trigger: CTCAAGCTCCAGTCTATGGCAGAGACTTGCTAAGGA...CAGTGCACTCAAGACGCATCTCCAGTTTTCGGGGGAAGCTGGTATTTGACATAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR GCA 90 bp ATTATATCTTTCCCAGTGCTGAATCTCTTGCGTGACATGGTCCCAAGGTTCACTGGCAGCTCCAGTAACTaGTTTACAGCCTGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: IISFPVLNLLRDMVPRFTGSSSN*FTACSS
Trigger: GCTGCTGCAGGCTGTAAAGCAGTTACTGGAGCTGCC...AGTGAACCTTGGGACCATGTCACGCAAGAGATTCAGCACTGGGAAAGATATAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CCA 90 bp CTGTTTAACACACTATGTCAAATACCAGCTTCCCCCGAAAACTGGAGATGCGTCGCTGTATTTGATAACTaGGAGACTGGGGTGCCGACG +
Preference number: 4 (lower is better)
Translates to: LFNTLCQIPASPENWRCVAVFDN*ETGVPT
Trigger: CGTCGGCACCCCAGTCTCCCAGTTATCAAATACAGC...GACGCATCTCCAGTTTTCGGGGGAAGCTGGTATTTGACATAGTGTGTTAAACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CCA 90 bp CCTCATCGTACCCTCAGCTGTGACATCTGTACTACCATTGCCTCTGCGTGGTCCATAGTGCCTTATTGGTaGCTGAGGAAGGTCTATTTA +
Preference number: 4 (lower is better)
Translates to: PHRTLSCDICTTIASAWSIVPYW*LRKVYL
Trigger: TAAATAGACCTTCCTCAGCCACCAATAAGGCACTAT...GGACCACGCAGAGGCAATGGTAGTACAGATGTCACAGCTGAGGGTACGATGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CCA 90 bp GCCAAAATCAAGCCACAGCACAAAGGATACTATTGGATATGGACCTTTTTGCTTGACTGGGCCTGGCCCTaGATCTGTGGAACTTGCACC +
Preference number: 4 (lower is better)
Translates to: AKIKPQHKGYYWIWTFLLDWAWP*ICGTCT
Trigger: GGTGCAAGTTCCACAGATCCAGGGCCAGGCCCAGTC...AAGCAAAAAGGTCCATATCCAATAGTATCCTTTGTGCTGTGGCTTGATTTTGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CCA 90 bp ATAGTCTGTGTTCTCAAAGTTTCCAACTCTTACTTGCCGTATTGGAATGAACCCGACTGGGCCTGGCCCTaGATCTGTGGAACTTGCACC +
Preference number: 4 (lower is better)
Translates to: IVCVLKVSNSYLPYWNEPDWAWP*ICGTCT
Trigger: GGTGCAAGTTCCACAGATCCAGGGCCAGGCCCAGTC...GGGTTCATTCCAATACGGCAAGTAAGAGTTGGAAACTTTGAGAACACAGACTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CCA 90 bp CGTGACATGGTCCCAAGGTTCACTAATAAAGCGTTTTCTGTGAGGAAGGTAGTTTTTGCAACCTGGATCTaGGTCTGCACTTGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: RDMVPRFTNKAFSVRKVVFATWI*VCTCWA
Trigger: GGCCCAGCAAGTGCAGACCCAGATCCAGGTTGCAAA...AACTACCTTCCTCACAGAAAACGCTTTATTAGTGAACCTTGGGACCATGTCACG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CCA 90 bp AAAGAACTAAACTCTGGCAGACACTGTGGAAGCCCACGCCTTATCTTTAGAAAGTGCTGCCCTGACTACTaGCACGGAGGCTTAGTAGGT +
Preference number: 4 (lower is better)
Translates to: KELNSGRHCGSPRLIFRKCCPDY*HGGLVG
Trigger: ACCTACTAAGCCTCCGTGCCAGTAGTCAGGGCAGCA...CTTTCTAAAGATAAGGCGTGGGCTTCCACAGTGTCTGCCAGAGTTTAGTTCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CCA 90 bp TCCATTGTATGCTCCTCACACACGGCAGACGGCTTCTGTGGCGTGCAAAGCACTCATATTGCCTTTCTTTaGAATGGAAAACCCATCTCG +
Preference number: 4 (lower is better)
Translates to: SIVCSSHTADGFCGVQSTHIAFL*NGKPIS
Trigger: CGAGATGGGTTTTCCATTCCAAAGAAAGGCAATATG...AGTGCTTTGCACGCCACAGAAGCCGTCTGCCGTGTGTGAGGAGCATACAATGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CCA 90 bp CAAGCCACAGCACAAAGGATACTATTGGATATGGACCTTTTTGCTTTGGTGAAACGGAACGCCAACTTGTaGGGTCAAGGGTGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: QATAQRILLDMDLFALVKRNANL*GQGCRA
Trigger: AGCCCTGCACCCTTGACCCCACAAGTTGGCGTTCCG...TTTCACCAAAGCAAAAAGGTCCATATCCAATAGTATCCTTTGTGCTGTGGCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CCA 90 bp TATGCTCCTCACACACGGCAGACGGCTTCTGTGGCGTGCAAAGCACTACATGCTAGCCAGCATCATCCATaGGAGAATAAACTTCAAACA +
Preference number: 4 (lower is better)
Translates to: YAPHTRQTASVACKALHASQHHP*ENKLQT
Trigger: TGTTTGAAGTTTATTCTCCCATGGATGATGCTGGCT...AGCATGTAGTGCTTTGCACGCCACAGAAGCCGTCTGCCGTGTGTGAGGAGCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CCA 90 bp TACTTTTCTCCACATTTCTTATCAAGAGCTCAAGTGAGCTCCCCAGTTGATTTCCAGGGGCTTGGCGAATaGCACCTGCTGCTTCAGCAG +
Preference number: 4 (lower is better)
Translates to: YFSPHFLSRAQVSSPVDFQGLGE*HLLLQQ
Trigger: CTGCTGAAGCAGCAGGTGCCATTCGCCAAGCCCCTG...GAAATCAACTGGGGAGCTCACTTGAGCTCTTGATAAGAAATGTGGAGAAAAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CCA 90 bp TCTCCACATTTCTTATCAAGAGCTCAAGTGAGCTCCCCAGTTGATTTCACTGACGCTCAGCTGTGGGTTTaGCAAAAGTTGGCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: SPHFLSRAQVSSPVDFTDAQLWV*QKLAGA
Trigger: AGCCCCTGCCAACTTTTGCCAAACCCACAGCTGAGC...GTCAGTGAAATCAACTGGGGAGCTCACTTGAGCTCTTGATAAGAAATGTGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CCA 90 bp TACTTTTCTCCACATTTCTTATCAAGAGCTCAAGTGAGCTCCCCAGTTGATTTCTGCCGGGGTCTGCACTaGGGTCAGGTTGGTAGTGAC +
Preference number: 4 (lower is better)
Translates to: YFSPHFLSRAQVSSPVDFCRGLH*GQVGSD
Trigger: GTCACTACCAACCTGACCCCAGTGCAGACCCCGGCA...GAAATCAACTGGGGAGCTCACTTGAGCTCTTGATAAGAAATGTGGAGAAAAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR TCA 90 bp TATGGACCTTTTTGCTTTGGTGAAAACTTCAAAGTAAGGAGACACTGTCAATCATCATGGGCAGGGTGGTaGCTCCCGGTGAGGAGACCA +
Preference number: 4 (lower is better)
Translates to: YGPFCFGENFKVRRHCQSSWAGW*LPVRRP
Trigger: TGGTCTCCTCACCGGGAGTCACCACCCTGCCCATGA...TGATTGACAGTGTCTCCTTACTTTGAAGTTTTCACCAAAGCAAAAAGGTCCATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR TCA 90 bp ATTATATCTTTCCCAGTGCTGAATCTCTTGCGTGACATGGTCCCAAGGTTCACTGCTGAATCTCTTGCGTaGCATGGTCCCAAGGTTCAC +
Preference number: 4 (lower is better)
Translates to: IISFPVLNLLRDMVPRFTAESLA*HGPKVH
Trigger: GTGAACCTTGGGACCATGTCACGCAAGAGATTCAGC...AGTGAACCTTGGGACCATGTCACGCAAGAGATTCAGCACTGGGAAAGATATAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR TCA 90 bp CTATGTCAAATACCAGCTTCCCCCGAAAACTGGAGATGCGTCTTGAGTGCACTGAAAACCCATCTCGGATaGTTGACTTTAGACAGGCCT +
Preference number: 4 (lower is better)
Translates to: LCQIPASPENWRCVLSALKTHLG*LTLDRP
Trigger: AGGCCTGTCTAAAGTCAATCATCCGAGATGGGTTTT...CAGTGCACTCAAGACGCATCTCCAGTTTTCGGGGGAAGCTGGTATTTGACATAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR TCA 90 bp TTTCCAACTCTTACTTGCCGTATTGGAATGAACCCAGATTCACAAGGGGAAGGCCCTGTCTCTTTGCTTTaGGTTCTCTGTGGCTGCCAA +
Preference number: 4 (lower is better)
Translates to: FPTLTCRIGMNPDSQGEGPVSLL*VLCGCQ
Trigger: TTGGCAGCCACAGAGAACTCAAAGCAAAGAGACAGG...GCCTTCCCCTTGTGAATCTGGGTTCATTCCAATACGGCAAGTAAGAGTTGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR TCA 90 bp CAGCACAGGTGGTTCTCTGCTTCACTGGCAGAACCACACAAGCTTATCCTAGAGAGCAACTCTGCCTCGTaGCGAGTGATTTTATTTTCT +
Preference number: 4 (lower is better)
Translates to: QHRWFSASLAEPHKLILESNSAS*RVILFS
Trigger: AGAAAATAAAATCACTCGTCACGAGGCAGAGTTGCT...CTCTAGGATAAGCTTGTGTGGTTCTGCCAGTGAAGCAGAGAACCACCTGTGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR TCA 90 bp CAAGCCACAGCACAAAGGATACTATTGGATATGGACCTTTTTGCTTTGGTGAAAGGCTGCTGGGGCTGCTaGAGTGGAGATTTCCTCCAT +
Preference number: 4 (lower is better)
Translates to: QATAQRILLDMDLFALVKGCWGC*SGDFLH
Trigger: ATGGAGGAAATCTCCACTTCAGCAGCCCCAGCAGCC...TTTCACCAAAGCAAAAAGGTCCATATCCAATAGTATCCTTTGTGCTGTGGCTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR TCA 90 bp CAAGCCACAGCACAAAGGATACTATTGGATATGGACCTTTTTGCTTTGGTGAAAGGCTGTGTGACAGGGTaGACTTGCTGCCCTGGAACT +
Preference number: 4 (lower is better)
Translates to: QATAQRILLDMDLFALVKGCVTG*TCCPGT
Trigger: AGTTCCAGGGCAGCAAGTTCACCCTGTCACACAGCC...TTTCACCAAAGCAAAAAGGTCCATATCCAATAGTATCCTTTGTGCTGTGGCTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR TCA 90 bp AGGTGGTTCTCTGCTTCACTGGCAGAACCACACAAGCTTATCCTAGAGAAAATCTCCGCCTGTCTCTGTTaGAACTCCTCATCAGTTCCT +
Preference number: 4 (lower is better)
Translates to: RWFSASLAEPHKLILEKISACLC*NSSSVP
Trigger: AGGAACTGATGAGGAGTTTCAACAGAGACAGGCGGA...GATTTTCTCTAGGATAAGCTTGTGTGGTTCTGCCAGTGAAGCAGAGAACCACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR TCA 90 bp CTGTTTAACACACTATGTCAAATACCAGCTTCCCCCGAAAACTGGAGATGCGTCAGGTGTGTGAGCAGGTaGCACGATTGTGAGGTTCAA +
Preference number: 4 (lower is better)
Translates to: LFNTLCQIPASPENWRCVRCVSR*HDCEVQ
Trigger: TTGAACCTCACAATCGTGTCACCTGCTCACACACCT...GACGCATCTCCAGTTTTCGGGGGAAGCTGGTATTTGACATAGTGTGTTAAACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR TCA 90 bp AGGTGGTTCTCTGCTTCACTGGCAGAACCACACAAGCTTATCCTAGAGAAAATCTCCCAATTAGGTGTGTaGGCAGGTGACACGATTGTG +
Preference number: 4 (lower is better)
Translates to: RWFSASLAEPHKLILEKISQLGV*AGDTIV
Trigger: CACAATCGTGTCACCTGCTCACACACCTAATTGGGA...GATTTTCTCTAGGATAAGCTTGTGTGGTTCTGCCAGTGAAGCAGAGAACCACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR GCA 90 bp TTTCCAACTCTTACTTGCCGTATTGGAATGAACCCAGATTCACAAGGGGAAGGCGAGATGCGTCTTGAGTaGACTGAGTTGGGCATCAGT +
Preference number: 4 (lower is better)
Translates to: FPTLTCRIGMNPDSQGEGEMRLE*TELGIS
Trigger: ACTGATGCCCAACTCAGTGCACTCAAGACGCATCTC...GCCTTCCCCTTGTGAATCTGGGTTCATTCCAATACGGCAAGTAAGAGTTGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR GCA 90 bp TGGGGGAGGCCACTGTTGGCTGCTCTTTGGAATAACAATGCAATGACTGATCATCAGTGTTCGGGCTGCTaGCTTTATAGTCTGTGTTCT +
Preference number: 4 (lower is better)
Translates to: WGRPLLAALWNNNAMTDHQCSGC*LYSLCS
Trigger: AGAACACAGACTATAAAGGCAGCAGCCCGAACACTG...ATGATCAGTCATTGCATTGTTATTCCAAAGAGCAGCCAACAGTGGCCTCCCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR GCA 90 bp CGTGACATGGTCCCAAGGTTCACTAATAAAGCGTTTTCTGTGAGGAAGGTAGTTTGCTCTCTCAGGCCCTaGCTCAAGATCCTCATTCTG +
Preference number: 4 (lower is better)
Translates to: RDMVPRFTNKAFSVRKVVCSLRP*LKILIL
Trigger: CAGAATGAGGATCTTGAGGCAGGGCCTGAGAGAGCA...AACTACCTTCCTCACAGAAAACGCTTTATTAGTGAACCTTGGGACCATGTCACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR GCA 90 bp ATAGTCTGTGTTCTCAAAGTTTCCAACTCTTACTTGCCGTATTGGAATGAACCCCTCCCATGCCCTCACTaGAGTCATCACTGCGTCCTC +
Preference number: 4 (lower is better)
Translates to: IVCVLKVSNSYLPYWNEPLPCPH*SHHCVL
Trigger: GAGGACGCAGTGATGACTGCAGTGAGGGCATGGGAG...GGGTTCATTCCAATACGGCAAGTAAGAGTTGGAAACTTTGAGAACACAGACTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR GCA 90 bp CGTGACATGGTCCCAAGGTTCACTAATAAAGCGTTTTCTGTGAGGAAGGTAGTTCGTAGACATACTCCATaGTGTAGGCATCCTCTCGCG +
Preference number: 4 (lower is better)
Translates to: RDMVPRFTNKAFSVRKVVRRHTP*CRHPLA
Trigger: CGCGAGAGGATGCCTACAGCATGGAGTATGTCTACG...AACTACCTTCCTCACAGAAAACGCTTTATTAGTGAACCTTGGGACCATGTCACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR GCA 90 bp TATGGACCTTTTTGCTTTGGTGAAAACTTCAAAGTAAGGAGACACTGTCAATCAGACCGTGCCGGGGTCTaGACTGGGGTCAGGTTGGTA +
Preference number: 4 (lower is better)
Translates to: YGPFCFGENFKVRRHCQSDRAGV*TGVRLV
Trigger: TACCAACCTGACCCCAGTGCAGACCCCGGCACGGTC...TGATTGACAGTGTCTCCTTACTTTGAAGTTTTCACCAAAGCAAAAAGGTCCATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR GCA 90 bp GCCAAAATCAAGCCACAGCACAAAGGATACTATTGGATATGGACCTTTTTGCTTGTCGTCGTCTGTTGCTaGTGCTGCTGTTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: AKIKPQHKGYYWIWTFLLVVVCC*CCCCCC
Trigger: GCAGCAGCAACAGCAGCAGCAGCAACAGACGACGAC...AAGCAAAAAGGTCCATATCCAATAGTATCCTTTGTGCTGTGGCTTGATTTTGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CCA 90 bp TACTTTTCTCCACATTTCTTATCAAGAGCTCAAGTGAGCTCCCCAGTTGATTTCCTGAGCAGGACTCTGTaGTTTGGTGGGGGCAGATGC +
Preference number: 4 (lower is better)
Translates to: YFSPHFLSRAQVSSPVDFLSRTL*FGGGRC
Trigger: GCATCTGCCCCCACCAAACCACAGAGTCCTGCTCAG...GAAATCAACTGGGGAGCTCACTTGAGCTCTTGATAAGAAATGTGGAGAAAAGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CCA 90 bp ATTATATCTTTCCCAGTGCTGAATCTCTTGCGTGACATGGTCCCAAGGTTCACTCAACTTGCTGGATGCTaGCCACGGGTGTTTGCTGTT +
Preference number: 4 (lower is better)
Translates to: IISFPVLNLLRDMVPRFTQLAGC*PRVFAV
Trigger: AACAGCAAACACCCGTGGCCAGCATCCAGCAAGTTG...AGTGAACCTTGGGACCATGTCACGCAAGAGATTCAGCACTGGGAAAGATATAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CCA 90 bp GCCAAAATCAAGCCACAGCACAAAGGATACTATTGGATATGGACCTTTTTGCTTGCAGAGGCAACTTGCTaGATGCTGGCCACGGGTGTT +
Preference number: 4 (lower is better)
Translates to: AKIKPQHKGYYWIWTFLLAEATC*MLATGV
Trigger: AACACCCGTGGCCAGCATCCAGCAAGTTGCCTCTGC...AAGCAAAAAGGTCCATATCCAATAGTATCCTTTGTGCTGTGGCTTGATTTTGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CCA 90 bp CGTGACATGGTCCCAAGGTTCACTAATAAAGCGTTTTCTGTGAGGAAGGTAGTTCTCTGGCAGACACTGTaGAAGCCCACGCCTTATCTT +
Preference number: 4 (lower is better)
Translates to: RDMVPRFTNKAFSVRKVVLWQTL*KPTPYL
Trigger: AAGATAAGGCGTGGGCTTCCACAGTGTCTGCCAGAG...AACTACCTTCCTCACAGAAAACGCTTTATTAGTGAACCTTGGGACCATGTCACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CCA 90 bp TCTCCACATTTCTTATCAAGAGCTCAAGTGAGCTCCCCAGTTGATTTCACTGACGCTTCCCCCGAAAACTaGAGATGCGTCTTGAGTGCA +
Preference number: 4 (lower is better)
Translates to: SPHFLSRAQVSSPVDFTDASPEN*RCVLSA
Trigger: TGCACTCAAGACGCATCTCCAGTTTTCGGGGGAAGC...GTCAGTGAAATCAACTGGGGAGCTCACTTGAGCTCTTGATAAGAAATGTGGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CCA 90 bp TATGGACCTTTTTGCTTTGGTGAAAACTTCAAAGTAAGGAGACACTGTCAATCAACCATTGCCTCTGCGTaGTCCTCTGGGCCTCACGCC +
Preference number: 4 (lower is better)
Translates to: YGPFCFGENFKVRRHCQSTIASA*SSGPHA
Trigger: GGCGTGAGGCCCAGAGGACCACGCAGAGGCAATGGT...TGATTGACAGTGTCTCCTTACTTTGAAGTTTTCACCAAAGCAAAAAGGTCCATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CCA 90 bp GCCAAAATCAAGCCACAGCACAAAGGATACTATTGGATATGGACCTTTTTGCTTCTGTCACATTCGTCCTaGCTCACTGAGCCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: AKIKPQHKGYYWIWTFLLLSHSS*LTEPRP
Trigger: AGGCCTGGGCTCAGTGAGCCAGGACGAATGTGACAG...AAGCAAAAAGGTCCATATCCAATAGTATCCTTTGTGCTGTGGCTTGATTTTGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CCA 90 bp TATGCTCCTCACACACGGCAGACGGCTTCTGTGGCGTGCAAAGCACTACATGCTTCCAGTCCTCTGCTTTaGTATGTTCAACTAACTAAA +
Preference number: 4 (lower is better)
Translates to: YAPHTRQTASVACKALHASSPLL*YVQLTK
Trigger: TTTAGTTAGTTGAACATACCAAAGCAGAGGACTGGA...AGCATGTAGTGCTTTGCACGCCACAGAAGCCGTCTGCCGTGTGTGAGGAGCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CCA 90 bp TCTCCACATTTCTTATCAAGAGCTCAAGTGAGCTCCCCAGTTGATTTCACTGACACTCTCCCTGTCGCCTaGACAGTCATCTGCATCTTC +
Preference number: 4 (lower is better)
Translates to: SPHFLSRAQVSSPVDFTDTLPVA*TVICIF
Trigger: GAAGATGCAGATGACTGTCCAGGCGACAGGGAGAGT...GTCAGTGAAATCAACTGGGGAGCTCACTTGAGCTCTTGATAAGAAATGTGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CCA 90 bp CAAGCCACAGCACAAAGGATACTATTGGATATGGACCTTTTTGCTTTGGTGAAACCAGGAAGTGCACCATaGTCCAGAGCTCCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: QATAQRILLDMDLFALVKPGSAP*SRAPGR
Trigger: CCTTCCTGGAGCTCTGGACCATGGTGCACTTCCTGG...TTTCACCAAAGCAAAAAGGTCCATATCCAATAGTATCCTTTGTGCTGTGGCTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CCA 90 bp TATGGACCTTTTTGCTTTGGTGAAAACTTCAAAGTAAGGAGACACTGTCAATCATCGACGAGCCCAGGGTaGTTGCAGATGCGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: YGPFCFGENFKVRRHCQSSTSPG*LQMRCS
Trigger: GCTGCAGCGCATCTGCAACCACCCTGGGCTCGTCGA...TGATTGACAGTGTCTCCTTACTTTGAAGTTTTCACCAAAGCAAAAAGGTCCATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CCA 90 bp AAAGAACTAAACTCTGGCAGACACTGTGGAAGCCCACGCCTTATCTTTAGAAAGGATTCCGGCACTGTTTaGAAGAGCGGTAGATTCGGC +
Preference number: 4 (lower is better)
Translates to: KELNSGRHCGSPRLIFRKDSGTV*KSGRFG
Trigger: GCCGAATCTACCGCTCTTCCAAACAGTGCCGGAATC...CTTTCTAAAGATAAGGCGTGGGCTTCCACAGTGTCTGCCAGAGTTTAGTTCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR TCA 90 bp TACTTTTCTCCACATTTCTTATCAAGAGCTCAAGTGAGCTCCCCAGTTGATTTCTGTGGAACTTGCACCTaGGAGGTCGTCGTCGTCTGT +
Preference number: 4 (lower is better)
Translates to: YFSPHFLSRAQVSSPVDFCGTCT*EVVVVC
Trigger: ACAGACGACGACGACCTCTCAGGTGCAAGTTCCACA...GAAATCAACTGGGGAGCTCACTTGAGCTCTTGATAAGAAATGTGGAGAAAAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR TCA 90 bp TCTGGCAGACACTGTGGAAGCCCACGCCTTATCTTTAGAAAGTCCATTGTATGCCAATGTCACTTAAAGTaGGAGAATGGGGAGGAAGCA +
Preference number: 4 (lower is better)
Translates to: SGRHCGSPRLIFRKSIVCQCHLK*ENGEEA
Trigger: TGCTTCCTCCCCATTCTCTCACTTTAAGTGACATTG...GCATACAATGGACTTTCTAAAGATAAGGCGTGGGCTTCCACAGTGTCTGCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR TCA 90 bp TCTCCACATTTCTTATCAAGAGCTCAAGTGAGCTCCCCAGTTGATTTCACTGACCAAAGGAAACACACTTaGGAGACAGGAGACCCTCAC +
Preference number: 4 (lower is better)
Translates to: SPHFLSRAQVSSPVDFTDQRKHT*ETGDPH
Trigger: GTGAGGGTCTCCTGTCTCTCAAGTGTGTTTCCTTTG...GTCAGTGAAATCAACTGGGGAGCTCACTTGAGCTCTTGATAAGAAATGTGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR TCA 90 bp TACTTTTCTCCACATTTCTTATCAAGAGCTCAAGTGAGCTCCCCAGTTGATTTCCCTGTGGTACGGCTGTaGGTGGAGAGAATGGCACAA +
Preference number: 4 (lower is better)
Translates to: YFSPHFLSRAQVSSPVDFPVVRL*VERMAQ
Trigger: TTGTGCCATTCTCTCCACTCACAGCCGTACCACAGG...GAAATCAACTGGGGAGCTCACTTGAGCTCTTGATAAGAAATGTGGAGAAAAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR GCA 90 bp CAAGCCACAGCACAAAGGATACTATTGGATATGGACCTTTTTGCTTTGGTGAAATCTACCACTTGCGGCTaGTGTGCAAACTGCAGCGCA +
Preference number: 4 (lower is better)
Translates to: QATAQRILLDMDLFALVKSTTCG*CANCSA
Trigger: TGCGCTGCAGTTTGCACAGCAGCCGCAAGTGGTAGA...TTTCACCAAAGCAAAAAGGTCCATATCCAATAGTATCCTTTGTGCTGTGGCTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR GCA 90 bp ATAGTCTGTGTTCTCAAAGTTTCCAACTCTTACTTGCCGTATTGGAATGAACCCAGGGAGCCTTGTCGATaGTACCATCTGTGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: IVCVLKVSNSYLPYWNEPREPCR*YHLWQG
Trigger: TCCCTGCCACAGATGGTAGCATCGACAAGGCTCCCT...GGGTTCATTCCAATACGGCAAGTAAGAGTTGGAAACTTTGAGAACACAGACTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR GCA 90 bp AGAGGAAGCCATGTTGTCACTTTTTCCATGAGCCACGTAGTACAGAGAACGCGGTGCAGTTTCTGCTTCTaGATTTTGATGAGGTGTTCC +
Preference number: 4 (lower is better)
Translates to: RGSHVVTFSMSHVVQRTRCSFCF*ILMRCS
Trigger: GGAACACCTCATCAAAATGCAGAAGCAGAAACTGCA...CCGCGTTCTCTGTACTACGTGGCTCATGGAAAAAGTGACAACATGGCTTCCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR GCA 90 bp TACTTTTCTCCACATTTCTTATCAAGAGCTCAAGTGAGCTCCCCAGTTGATTTCCACAGGCCAGGAACGTaGCTTGTGTGTTTAGGTGGG +
Preference number: 4 (lower is better)
Translates to: YFSPHFLSRAQVSSPVDFHRPGT*LVCLGG
Trigger: CCCACCTAAACACACAAGGCACGTTCCTGGCCTGTG...GAAATCAACTGGGGAGCTCACTTGAGCTCTTGATAAGAAATGTGGAGAAAAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR GCA 90 bp TACTTTTCTCCACATTTCTTATCAAGAGCTCAAGTGAGCTCCCCAGTTGATTTCTACTACCATTGCCTCTaGGTGGTCCTCTGGGCCTCA +
Preference number: 4 (lower is better)
Translates to: YFSPHFLSRAQVSSPVDFYYHCL*VVLWAS
Trigger: TGAGGCCCAGAGGACCACGCAGAGGCAATGGTAGTA...GAAATCAACTGGGGAGCTCACTTGAGCTCTTGATAAGAAATGTGGAGAAAAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR GCA 90 bp CTGTTTAACACACTATGTCAAATACCAGCTTCCCCCGAAAACTGGAGATGCGTCGATTTCACTGACTCCTaGTGTATCGCTGTCCACAGA +
Preference number: 4 (lower is better)
Translates to: LFNTLCQIPASPENWRCVDFTDS*CIAVHR
Trigger: TCTGTGGACAGCGATACAGCAGGAGTCAGTGAAATC...GACGCATCTCCAGTTTTCGGGGGAAGCTGGTATTTGACATAGTGTGTTAAACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR GCA 90 bp AACACACTATGTCAAATACCAGCTTCCCCCGAAAACTGGAGATGCGTCTTGAGTCAGTGTTCGGGCTGCTaGCTTTATAGTCTGTGTTCT +
Preference number: 4 (lower is better)
Translates to: NTLCQIPASPENWRCVLSQCSGC*LYSLCS
Trigger: AGAACACAGACTATAAAGGCAGCAGCCCGAACACTG...ACTCAAGACGCATCTCCAGTTTTCGGGGGAAGCTGGTATTTGACATAGTGTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR GCA 90 bp GCCAAAATCAAGCCACAGCACAAAGGATACTATTGGATATGGACCTTTTTGCTTGGCTGCTGCTGCTTTTaGCTCCGGATTGGCAGAGAA +
Preference number: 4 (lower is better)
Translates to: AKIKPQHKGYYWIWTFLLGCCCF*LRIGRE
Trigger: TTCTCTGCCAATCCGGAGGCAAAAGCAGCAGCAGCC...AAGCAAAAAGGTCCATATCCAATAGTATCCTTTGTGCTGTGGCTTGATTTTGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR GCA 90 bp AGGTGGTTCTCTGCTTCACTGGCAGAACCACACAAGCTTATCCTAGAGAAAATCATCAGTTCCTGCCGTTaGTCACTGCTGGCATTTTCA +
Preference number: 4 (lower is better)
Translates to: RWFSASLAEPHKLILEKIISSCR*SLLAFS
Trigger: TGAAAATGCCAGCAGTGAGCAACGGCAGGAACTGAT...GATTTTCTCTAGGATAAGCTTGTGTGGTTCTGCCAGTGAAGCAGAGAACCACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR GCA 90 bp CTGTTTAACACACTATGTCAAATACCAGCTTCCCCCGAAAACTGGAGATGCGTCTTGGCGAATGGCACCTaGTGCTTCAGCAGAATATTC +
Preference number: 4 (lower is better)
Translates to: LFNTLCQIPASPENWRCVLANGT*CFSRIF
Trigger: GAATATTCTGCTGAAGCAGCAGGTGCCATTCGCCAA...GACGCATCTCCAGTTTTCGGGGGAAGCTGGTATTTGACATAGTGTGTTAAACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR GCA 90 bp TTTCCAACTCTTACTTGCCGTATTGGAATGAACCCAGATTCACAAGGGGAAGGCGTTGATTCCACTTTCTaGCAACACAGACGCGTGCTT +
Preference number: 4 (lower is better)
Translates to: FPTLTCRIGMNPDSQGEGVDSTF*QHRRVL
Trigger: AAGCACGCGTCTGTGTTGGCAGAAAGTGGAATCAAC...GCCTTCCCCTTGTGAATCTGGGTTCATTCCAATACGGCAAGTAAGAGTTGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CCA 90 bp CTATGTCAAATACCAGCTTCCCCCGAAAACTGGAGATGCGTCTTGAGTGCACTGGAAAGTTCTGTTTGGTaGTCCACAACGCCTTCATTT +
Preference number: 4 (lower is better)
Translates to: LCQIPASPENWRCVLSALESSVW*STTPSF
Trigger: AAATGAAGGCGTTGTGGACCACCAAACAGAACTTTC...CAGTGCACTCAAGACGCATCTCCAGTTTTCGGGGGAAGCTGGTATTTGACATAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CCA 90 bp ATAGTCTGTGTTCTCAAAGTTTCCAACTCTTACTTGCCGTATTGGAATGAACCCCTGGCCCTGGATCTGTaGAACTTGCACCTGAGAGGT +
Preference number: 4 (lower is better)
Translates to: IVCVLKVSNSYLPYWNEPLALDL*NLHLRG
Trigger: ACCTCTCAGGTGCAAGTTCCACAGATCCAGGGCCAG...GGGTTCATTCCAATACGGCAAGTAAGAGTTGGAAACTTTGAGAACACAGACTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CCA 90 bp TATGGACCTTTTTGCTTTGGTGAAAACTTCAAAGTAAGGAGACACTGTCAATCATCCTGCTGCCTTCTGTaGCTGACCGATCGCCACGCT +
Preference number: 4 (lower is better)
Translates to: YGPFCFGENFKVRRHCQSSCCLL*LTDRHA
Trigger: AGCGTGGCGATCGGTCAGCCACAGAAGGCAGCAGGA...TGATTGACAGTGTCTCCTTACTTTGAAGTTTTCACCAAAGCAAAAAGGTCCATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CCA 90 bp TATGGACCTTTTTGCTTTGGTGAAAACTTCAAAGTAAGGAGACACTGTCAATCAATGGCCTTCTGCTGCTaGACGGCCTGCTGCTTCAGC +
Preference number: 4 (lower is better)
Translates to: YGPFCFGENFKVRRHCQSMAFCC*TACCFS
Trigger: GCTGAAGCAGCAGGCCGTCCAGCAGCAGAAGGCCAT...TGATTGACAGTGTCTCCTTACTTTGAAGTTTTCACCAAAGCAAAAAGGTCCATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CCA 90 bp GCCAAAATCAAGCCACAGCACAAAGGATACTATTGGATATGGACCTTTTTGCTTGGCAGACGGCTTCTGTaGCGTGCAAAGCACTACATG +
Preference number: 4 (lower is better)
Translates to: AKIKPQHKGYYWIWTFLLGRRLL*RAKHYM
Trigger: CATGTAGTGCTTTGCACGCCACAGAAGCCGTCTGCC...AAGCAAAAAGGTCCATATCCAATAGTATCCTTTGTGCTGTGGCTTGATTTTGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CCA 90 bp CTGATCATTTCCCTTGAACACAGGCCAGGAACGTGCCTTGTGTGTTTAGGTGGGCATATTGCCTTTCTTTaGAATGGAAAACCCATCTCG +
Preference number: 4 (lower is better)
Translates to: LIISLEHRPGTCLVCLGGHIAFL*NGKPIS
Trigger: CGAGATGGGTTTTCCATTCCAAAGAAAGGCAATATG...CCCACCTAAACACACAAGGCACGTTCCTGGCCTGTGTTCAAGGGAAATGATCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CCA 90 bp CGTGACATGGTCCCAAGGTTCACTAATAAAGCGTTTTCTGTGAGGAAGGTAGTTTCTTCCTGTAAAGTTTaGCCAGCCAGTCCAGGCCAA +
Preference number: 4 (lower is better)
Translates to: RDMVPRFTNKAFSVRKVVSSCKV*PASPGQ
Trigger: TTGGCCTGGACTGGCTGGCCAAACTTTACAGGAAGA...AACTACCTTCCTCACAGAAAACGCTTTATTAGTGAACCTTGGGACCATGTCACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CCA 90 bp AAAGAACTAAACTCTGGCAGACACTGTGGAAGCCCACGCCTTATCTTTAGAAAGAGAAGCAGACGTTGTTaGCTCTGCAGGGTGAAAACC +
Preference number: 4 (lower is better)
Translates to: KELNSGRHCGSPRLIFRKRSRRC*LCRVKT
Trigger: GGTTTTCACCCTGCAGAGCCAACAACGTCTGCTTCT...CTTTCTAAAGATAAGGCGTGGGCTTCCACAGTGTCTGCCAGAGTTTAGTTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CCA 90 bp CAAGCCACAGCACAAAGGATACTATTGGATATGGACCTTTTTGCTTTGGTGAAACTTTTGCCTCCGGATTaGCAGAGAACGTGGCGATGG +
Preference number: 4 (lower is better)
Translates to: QATAQRILLDMDLFALVKLLPPD*QRTWRW
Trigger: CCATCGCCACGTTCTCTGCCAATCCGGAGGCAAAAG...TTTCACCAAAGCAAAAAGGTCCATATCCAATAGTATCCTTTGTGCTGTGGCTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CCA 90 bp CTGTTTAACACACTATGTCAAATACCAGCTTCCCCCGAAAACTGGAGATGCGTCCAAGGTTTATACCTGTaGTACGGCTGTGAGTGGAGA +
Preference number: 4 (lower is better)
Translates to: LFNTLCQIPASPENWRCVQGLYL*YGCEWR
Trigger: TCTCCACTCACAGCCGTACCACAGGTATAAACCTTG...GACGCATCTCCAGTTTTCGGGGGAAGCTGGTATTTGACATAGTGTGTTAAACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CCA 90 bp TACTTTTCTCCACATTTCTTATCAAGAGCTCAAGTGAGCTCCCCAGTTGATTTCTCCTGTGCGGACTTCTaGGCATCCTCCTCCAGATAC +
Preference number: 4 (lower is better)
Translates to: YFSPHFLSRAQVSSPVDFSCADF*ASSSRY
Trigger: GTATCTGGAGGAGGATGCCCAGAAGTCCGCACAGGA...GAAATCAACTGGGGAGCTCACTTGAGCTCTTGATAAGAAATGTGGAGAAAAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR TCA 90 bp AACACACTATGTCAAATACCAGCTTCCCCCGAAAACTGGAGATGCGTCTTGAGTTATATGAGAGGATTTTaGGTCCGGGACACCAACGTT +
Preference number: 4 (lower is better)
Translates to: NTLCQIPASPENWRCVLSYMRGF*VRDTNV
Trigger: AACGTTGGTGTCCCGGACTCAAAATCCTCTCATATA...ACTCAAGACGCATCTCCAGTTTTCGGGGGAAGCTGGTATTTGACATAGTGTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR TCA 90 bp AGGTGGTTCTCTGCTTCACTGGCAGAACCACACAAGCTTATCCTAGAGAAAATCCTGCCTCGTGACGAGTaGTTTTATTTTCTAAGCCGA +
Preference number: 4 (lower is better)
Translates to: RWFSASLAEPHKLILEKILPRDE*FYFLSR
Trigger: TCGGCTTAGAAAATAAAATCACTCGTCACGAGGCAG...GATTTTCTCTAGGATAAGCTTGTGTGGTTCTGCCAGTGAAGCAGAGAACCACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR GCA 90 bp TATGGACCTTTTTGCTTTGGTGAAAACTTCAAAGTAAGGAGACACTGTCAATCAGAGGGCATCGCCTGCTaGCTCTTAAACAGGTCCGTC +
Preference number: 4 (lower is better)
Translates to: YGPFCFGENFKVRRHCQSEGIAC*LLNRSV
Trigger: GACGGACCTGTTTAAGAGGCAGCAGGCGATGCCCTC...TGATTGACAGTGTCTCCTTACTTTGAAGTTTTCACCAAAGCAAAAAGGTCCATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR GCA 90 bp AGGTGGTTCTCTGCTTCACTGGCAGAACCACACAAGCTTATCCTAGAGAAAATCGGCATCTGCAGTTTCTaGTTCTGCATTTTGATGAGG +
Preference number: 4 (lower is better)
Translates to: RWFSASLAEPHKLILEKIGICSF*FCILMR
Trigger: CCTCATCAAAATGCAGAAGCAGAAACTGCAGATGCC...GATTTTCTCTAGGATAAGCTTGTGTGGTTCTGCCAGTGAAGCAGAGAACCACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR GCA 90 bp TGGGGGAGGCCACTGTTGGCTGCTCTTTGGAATAACAATGCAATGACTGATCATAAGGACCATTTGTCCTaGAGTGTGGGATGCATTTTA +
Preference number: 4 (lower is better)
Translates to: WGRPLLAALWNNNAMTDHKDHLS*SVGCIL
Trigger: TAAAATGCATCCCACACTGCAGGACAAATGGTCCTT...ATGATCAGTCATTGCATTGTTATTCCAAAGAGCAGCCAACAGTGGCCTCCCCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR GCA 90 bp TCTGGCAGACACTGTGGAAGCCCACGCCTTATCTTTAGAAAGTCCATTGTATGCATCCTAGAGAAAATCTaGTGTCGTAAGTCCACAAGG +
Preference number: 4 (lower is better)
Translates to: SGRHCGSPRLIFRKSIVCILEKI*CRKSTR
Trigger: CCTTGTGGACTTACGACAGCAGATTTTCTCTAGGAT...GCATACAATGGACTTTCTAAAGATAAGGCGTGGGCTTCCACAGTGTCTGCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR GCA 90 bp TCCCAGGGTCGCCAATTAGAGTCTGACAGTGTTCGGGCTGCTGCCTTTATAGTCGCCTTTTGTTTGGTATaGTATCAATGCCCTTTAAAA +
Preference number: 4 (lower is better)
Translates to: SQGRQLESDSVRAAAFIVAFCLV*YQCPLK
Trigger: TTTTAAAGGGCATTGATAGCATACCAAACAAAAGGC...GACTATAAAGGCAGCAGCCCGAACACTGTCAGACTCTAATTGGCGACCCTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR GCA 90 bp GCTGTCGTAAGTCCACAAGGAAGAGTTGACTGGGCCCACCGCTATAGCCAATACGCCTTTTGTTTGGTATaGTATCAATGCCCTTTAAAA +
Preference number: 4 (lower is better)
Translates to: AVVSPQGRVDWAHRYSQYAFCLV*YQCPLK
Trigger: TTTTAAAGGGCATTGATAGCATACCAAACAAAAGGC...GTATTGGCTATAGCGGTGGGCCCAGTCAACTCTTCCTTGTGGACTTACGACAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR GCA 90 bp AGGTGGTTCTCTGCTTCACTGGCAGAACCACACAAGCTTATCCTAGAGAAAATCCAGCCCAGCTTCATCTaGCAATATGCCATTGAGATT +
Preference number: 4 (lower is better)
Translates to: RWFSASLAEPHKLILEKIQPSFI*QYAIEI
Trigger: AATCTCAATGGCATATTGGCAGATGAAGCTGGGCTG...GATTTTCTCTAGGATAAGCTTGTGTGGTTCTGCCAGTGAAGCAGAGAACCACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR GCA 90 bp ATTATATCTTTCCCAGTGCTGAATCTCTTGCGTGACATGGTCCCAAGGTTCACTCCACTCCTGTCTCTTTaGTTTGAGTTCTCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: IISFPVLNLLRDMVPRFTPLLSL*FEFSVA
Trigger: AGCCACAGAGAACTCAAAGCAAAGAGACAGGAGTGG...AGTGAACCTTGGGACCATGTCACGCAAGAGATTCAGCACTGGGAAAGATATAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR GCA 90 bp ATAGTCTGTGTTCTCAAAGTTTCCAACTCTTACTTGCCGTATTGGAATGAACCCCAGGCTGAAACAACCTaGTGGCCTTCAGCTTTGCTG +
Preference number: 4 (lower is better)
Translates to: IVCVLKVSNSYLPYWNEPQAETT*WPSALL
Trigger: CAGCAAAGCTGAAGGCCAGCAGGTTGTTTCAGCCTG...GGGTTCATTCCAATACGGCAAGTAAGAGTTGGAAACTTTGAGAACACAGACTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR GCA 90 bp ATAGTCTGTGTTCTCAAAGTTTCCAACTCTTACTTGCCGTATTGGAATGAACCCGTTCCAGAACTCCCATaGCCTCACTGCAGTCATCAC +
Preference number: 4 (lower is better)
Translates to: IVCVLKVSNSYLPYWNEPVPELP*PHCSHH
Trigger: GTGATGACTGCAGTGAGGGCATGGGAGTTCTGGAAC...GGGTTCATTCCAATACGGCAAGTAAGAGTTGGAAACTTTGAGAACACAGACTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR GCA 90 bp TCTCCACATTTCTTATCAAGAGCTCAAGTGAGCTCCCCAGTTGATTTCACTGACGCGAATGGCACCTGCTaGTTCAGCAGAATATTCTTC +
Preference number: 4 (lower is better)
Translates to: SPHFLSRAQVSSPVDFTDANGTC*FSRIFF
Trigger: GAAGAATATTCTGCTGAAGCAGCAGGTGCCATTCGC...GTCAGTGAAATCAACTGGGGAGCTCACTTGAGCTCTTGATAAGAAATGTGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CCA 90 bp TACTTTTCTCCACATTTCTTATCAAGAGCTCAAGTGAGCTCCCCAGTTGATTTCCGATGCTACCATCTGTaGCAGGGAGGAAAGCTGAGA +
Preference number: 4 (lower is better)
Translates to: YFSPHFLSRAQVSSPVDFRCYHL*QGGKLR
Trigger: TCTCAGCTTTCCTCCCTGCCACAGATGGTAGCATCG...GAAATCAACTGGGGAGCTCACTTGAGCTCTTGATAAGAAATGTGGAGAAAAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CCA 90 bp AACACACTATGTCAAATACCAGCTTCCCCCGAAAACTGGAGATGCGTCTTGAGTGAGATAGTGCCTTATTaGTGGCTGAGGAAGGTCTAT +
Preference number: 4 (lower is better)
Translates to: NTLCQIPASPENWRCVLSEIVPY*WLRKVY
Trigger: ATAGACCTTCCTCAGCCACCAATAAGGCACTATCTC...ACTCAAGACGCATCTCCAGTTTTCGGGGGAAGCTGGTATTTGACATAGTGTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CCA 90 bp CAAGCCACAGCACAAAGGATACTATTGGATATGGACCTTTTTGCTTTGGTGAAACTCTGGCAGACACTGTaGAAGCCCACGCCTTATCTT +
Preference number: 4 (lower is better)
Translates to: QATAQRILLDMDLFALVKLWQTL*KPTPYL
Trigger: AAGATAAGGCGTGGGCTTCCACAGTGTCTGCCAGAG...TTTCACCAAAGCAAAAAGGTCCATATCCAATAGTATCCTTTGTGCTGTGGCTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CCA 90 bp TACTTTTCTCCACATTTCTTATCAAGAGCTCAAGTGAGCTCCCCAGTTGATTTCCAAGGAAGAGTTGACTaGGCCCACCGCTATAGCCAA +
Preference number: 4 (lower is better)
Translates to: YFSPHFLSRAQVSSPVDFQGRVD*AHRYSQ
Trigger: TTGGCTATAGCGGTGGGCCCAGTCAACTCTTCCTTG...GAAATCAACTGGGGAGCTCACTTGAGCTCTTGATAAGAAATGTGGAGAAAAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CCA 90 bp ATTATATCTTTCCCAGTGCTGAATCTCTTGCGTGACATGGTCCCAAGGTTCACTGGTTCTCTGCTTCACTaGCAGAACCACACAAGCTTA +
Preference number: 4 (lower is better)
Translates to: IISFPVLNLLRDMVPRFTGSLLH*QNHTSL
Trigger: TAAGCTTGTGTGGTTCTGCCAGTGAAGCAGAGAACC...AGTGAACCTTGGGACCATGTCACGCAAGAGATTCAGCACTGGGAAAGATATAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CCA 90 bp TACTTTTCTCCACATTTCTTATCAAGAGCTCAAGTGAGCTCCCCAGTTGATTTCCCACAACAGCACAGGTaGTTCTCTGCTTCACTGGCA +
Preference number: 4 (lower is better)
Translates to: YFSPHFLSRAQVSSPVDFPQQHR*FSASLA
Trigger: TGCCAGTGAAGCAGAGAACCACCTGTGCTGTTGTGG...GAAATCAACTGGGGAGCTCACTTGAGCTCTTGATAAGAAATGTGGAGAAAAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CCA 90 bp TCCCAGGGTCGCCAATTAGAGTCTGACAGTGTTCGGGCTGCTGCCTTTATAGTCCACAAAGGATACTATTaGATATGGACCTTTTTGCTT +
Preference number: 4 (lower is better)
Translates to: SQGRQLESDSVRAAAFIVHKGYY*IWTFLL
Trigger: AAGCAAAAAGGTCCATATCCAATAGTATCCTTTGTG...GACTATAAAGGCAGCAGCCCGAACACTGTCAGACTCTAATTGGCGACCCTGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CCA 90 bp AACCCATCTCGGATGATTGACTTTAGACAGGCCTTCCCCTCTGCGAAGACCACGAGCATATTTTTCAATTaGTGTAAGCTGCTCCATGAA +
Preference number: 4 (lower is better)
Translates to: NPSRMIDFRQAFPSAKTTSIFFN*CKLLHE
Trigger: TTCATGGAGCAGCTTACACCAATTGAAAAATATGCT...CGTGGTCTTCGCAGAGGGGAAGGCCTGTCTAAAGTCAATCATCCGAGATGGGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CCA 90 bp CAAGCCACAGCACAAAGGATACTATTGGATATGGACCTTTTTGCTTTGGTGAAAGACCAGGCTCAGCTGTaGGTTTGGCAAAAGTTGGCA +
Preference number: 4 (lower is better)
Translates to: QATAQRILLDMDLFALVKDQAQL*VWQKLA
Trigger: TGCCAACTTTTGCCAAACCCACAGCTGAGCCTGGTC...TTTCACCAAAGCAAAAAGGTCCATATCCAATAGTATCCTTTGTGCTGTGGCTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR TCA 90 bp AAAGAACTAAACTCTGGCAGACACTGTGGAAGCCCACGCCTTATCTTTAGAAAGAAAACCCATCTCGGATaGTTGACTTTAGACAGGCCT +
Preference number: 4 (lower is better)
Translates to: KELNSGRHCGSPRLIFRKKTHLG*LTLDRP
Trigger: AGGCCTGTCTAAAGTCAATCATCCGAGATGGGTTTT...CTTTCTAAAGATAAGGCGTGGGCTTCCACAGTGTCTGCCAGAGTTTAGTTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR TCA 90 bp ATTATATCTTTCCCAGTGCTGAATCTCTTGCGTGACATGGTCCCAAGGTTCACTTATCAAGAGCTCAAGTaGGCTCCCCAGTTGATTTCA +
Preference number: 4 (lower is better)
Translates to: IISFPVLNLLRDMVPRFTYQELK*APQLIS
Trigger: TGAAATCAACTGGGGAGCTCACTTGAGCTCTTGATA...AGTGAACCTTGGGACCATGTCACGCAAGAGATTCAGCACTGGGAAAGATATAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR TCA 90 bp AACACACTATGTCAAATACCAGCTTCCCCCGAAAACTGGAGATGCGTCTTGAGTTCTTCTGATAATCTCTaGGAGCCCCATACAACAAAG +
Preference number: 4 (lower is better)
Translates to: NTLCQIPASPENWRCVLSSSDNL*EPHTTK
Trigger: CTTTGTTGTATGGGGCTCTCAGAGATTATCAGAAGA...ACTCAAGACGCATCTCCAGTTTTCGGGGGAAGCTGGTATTTGACATAGTGTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR TCA 90 bp TCTCCACATTTCTTATCAAGAGCTCAAGTGAGCTCCCCAGTTGATTTCACTGACAACAGCGCCGCTCGTTaGCTAAATAAATCTGATCCA +
Preference number: 4 (lower is better)
Translates to: SPHFLSRAQVSSPVDFTDNSAAR*LNKSDP
Trigger: TGGATCAGATTTATTTAGTCAACGAGCGGCGCTGTT...GTCAGTGAAATCAACTGGGGAGCTCACTTGAGCTCTTGATAAGAAATGTGGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR TCA 90 bp TGGGGGAGGCCACTGTTGGCTGCTCTTTGGAATAACAATGCAATGACTGATCATCGATTCTTACATAGGTaGGGTAATGGAAGTTCAAGA +
Preference number: 4 (lower is better)
Translates to: WGRPLLAALWNNNAMTDHRFLHR*GNGSSR
Trigger: TCTTGAACTTCCATTACCTCACCTATGTAAGAATCG...ATGATCAGTCATTGCATTGTTATTCCAAAGAGCAGCCAACAGTGGCCTCCCCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR TCA 90 bp ATAGTCTGTGTTCTCAAAGTTTCCAACTCTTACTTGCCGTATTGGAATGAACCCGTGACAGAAGGTTCCTaGGAAAGCACCACAAACTCC +
Preference number: 4 (lower is better)
Translates to: IVCVLKVSNSYLPYWNEPVTEGS*ESTTNS
Trigger: GGAGTTTGTGGTGCTTTCTCAGGAACCTTCTGTCAC...GGGTTCATTCCAATACGGCAAGTAAGAGTTGGAAACTTTGAGAACACAGACTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR GCA 90 bp ATTATATCTTTCCCAGTGCTGAATCTCTTGCGTGACATGGTCCCAAGGTTCACTGGCATCTGCAGTTTCTaGTTCTGCATTTTGATGAGG +
Preference number: 4 (lower is better)
Translates to: IISFPVLNLLRDMVPRFTGICSF*FCILMR
Trigger: CCTCATCAAAATGCAGAAGCAGAAACTGCAGATGCC...AGTGAACCTTGGGACCATGTCACGCAAGAGATTCAGCACTGGGAAAGATATAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR GCA 90 bp GCCAAAATCAAGCCACAGCACAAAGGATACTATTGGATATGGACCTTTTTGCTTCCTGCCGTTGCTCACTaGTGGCATTTTCATCGATTC +
Preference number: 4 (lower is better)
Translates to: AKIKPQHKGYYWIWTFLLPAVAH*WHFHRF
Trigger: GAATCGATGAAAATGCCAGCAGTGAGCAACGGCAGG...AAGCAAAAAGGTCCATATCCAATAGTATCCTTTGTGCTGTGGCTTGATTTTGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR GCA 90 bp TACTTTTCTCCACATTTCTTATCAAGAGCTCAAGTGAGCTCCCCAGTTGATTTCCACTGCAGTCATCACTaGGTCCTCACTGTTTCTCTC +
Preference number: 4 (lower is better)
Translates to: YFSPHFLSRAQVSSPVDFHCSHH*VLTVSL
Trigger: GAGAGAAACAGTGAGGACGCAGTGATGACTGCAGTG...GAAATCAACTGGGGAGCTCACTTGAGCTCTTGATAAGAAATGTGGAGAAAAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR GCA 90 bp CGTGACATGGTCCCAAGGTTCACTAATAAAGCGTTTTCTGTGAGGAAGGTAGTTAGAATATTCTTCTTCTaGTCCTTGCCCTCTCTGCGA +
Preference number: 4 (lower is better)
Translates to: RDMVPRFTNKAFSVRKVVRIFFF*SLPSLR
Trigger: TCGCAGAGAGGGCAAGGAGCAGAAGAAGAATATTCT...AACTACCTTCCTCACAGAAAACGCTTTATTAGTGAACCTTGGGACCATGTCACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR GCA 90 bp ATTATATCTTTCCCAGTGCTGAATCTCTTGCGTGACATGGTCCCAAGGTTCACTGAGAAGCTGGAAATGTaGAGGTGTGATGGTTTTTCC +
Preference number: 4 (lower is better)
Translates to: IISFPVLNLLRDMVPRFTEKLEM*RCDGFS
Trigger: GGAAAAACCATCACACCTGCACATTTCCAGCTTCTC...AGTGAACCTTGGGACCATGTCACGCAAGAGATTCAGCACTGGGAAAGATATAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CCA 90 bp CTGTTTAACACACTATGTCAAATACCAGCTTCCCCCGAAAACTGGAGATGCGTCTTAGAAAGTTCTGTTTaGTGGTCCACAACGCCTTCA +
Preference number: 4 (lower is better)
Translates to: LFNTLCQIPASPENWRCVLESSV*WSTTPS
Trigger: TGAAGGCGTTGTGGACCACCAAACAGAACTTTCTAA...GACGCATCTCCAGTTTTCGGGGGAAGCTGGTATTTGACATAGTGTGTTAAACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CCA 90 bp CAGCACAGGTGGTTCTCTGCTTCACTGGCAGAACCACACAAGCTTATCCTAGAGATTTTGCCTTTTGTTTaGTATGCTATCAATGCCCTT +
Preference number: 4 (lower is better)
Translates to: QHRWFSASLAEPHKLILEILPFV*YAINAL
Trigger: AAGGGCATTGATAGCATACCAAACAAAAGGCAAAAT...CTCTAGGATAAGCTTGTGTGGTTCTGCCAGTGAAGCAGAGAACCACCTGTGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CCA 90 bp TCTCCACATTTCTTATCAAGAGCTCAAGTGAGCTCCCCAGTTGATTTCACTGACAATGTCCTTGGCGTTTaGCTTCCCGATATTCATCCT +
Preference number: 4 (lower is better)
Translates to: SPHFLSRAQVSSPVDFTDNVLGV*LPDIHP
Trigger: AGGATGAATATCGGGAAGCCAAACGCCAAGGACATT...GTCAGTGAAATCAACTGGGGAGCTCACTTGAGCTCTTGATAAGAAATGTGGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CCA 90 bp AAAGAACTAAACTCTGGCAGACACTGTGGAAGCCCACGCCTTATCTTTAGAAAGGCCGTTGCTCACTGCTaGCATTTTCATCGATTCTTA +
Preference number: 4 (lower is better)
Translates to: KELNSGRHCGSPRLIFRKAVAHC*HFHRFL
Trigger: TAAGAATCGATGAAAATGCCAGCAGTGAGCAACGGC...CTTTCTAAAGATAAGGCGTGGGCTTCCACAGTGTCTGCCAGAGTTTAGTTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR TCA 90 bp AGGTGGTTCTCTGCTTCACTGGCAGAACCACACAAGCTTATCCTAGAGAAAATCATTCAAGCTCCCACTTaGGTATGTTACAACTTCTCA +
Preference number: 4 (lower is better)
Translates to: RWFSASLAEPHKLILEKIIQAPT*VCYNFS
Trigger: TGAGAAGTTGTAACATACTCAAGTGGGAGCTTGAAT...GATTTTCTCTAGGATAAGCTTGTGTGGTTCTGCCAGTGAAGCAGAGAACCACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR GCA 90 bp TCTCCACATTTCTTATCAAGAGCTCAAGTGAGCTCCCCAGTTGATTTCACTGACAAGGACCATTTGTCCTaGAGTGTGGGATGCATTTTA +
Preference number: 4 (lower is better)
Translates to: SPHFLSRAQVSSPVDFTDKDHLS*SVGCIL
Trigger: TAAAATGCATCCCACACTGCAGGACAAATGGTCCTT...GTCAGTGAAATCAACTGGGGAGCTCACTTGAGCTCTTGATAAGAAATGTGGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR GCA 90 bp GCCAAAATCAAGCCACAGCACAAAGGATACTATTGGATATGGACCTTTTTGCTTAGAAAGTCCATTGTATaGTCCTCACACACGGCAGAC +
Preference number: 4 (lower is better)
Translates to: AKIKPQHKGYYWIWTFLLRKSIV*SSHTAD
Trigger: GTCTGCCGTGTGTGAGGAGCATACAATGGACTTTCT...AAGCAAAAAGGTCCATATCCAATAGTATCCTTTGTGCTGTGGCTTGATTTTGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR GCA 90 bp CTATGTCAAATACCAGCTTCCCCCGAAAACTGGAGATGCGTCTTGAGTGCACTGGGATATGGACCTTTTTaGTTTGGTGAAAACTTCAAA +
Preference number: 4 (lower is better)
Translates to: LCQIPASPENWRCVLSALGYGPF*FGENFK
Trigger: TTTGAAGTTTTCACCAAAGCAAAAAGGTCCATATCC...CAGTGCACTCAAGACGCATCTCCAGTTTTCGGGGGAAGCTGGTATTTGACATAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR GCA 90 bp CTGTTTAACACACTATGTCAAATACCAGCTTCCCCCGAAAACTGGAGATGCGTCTTTCCAACTCTTACTTaGCGTATTGGAATGAACCCA +
Preference number: 4 (lower is better)
Translates to: LFNTLCQIPASPENWRCVFPTLT*RIGMNP
Trigger: TGGGTTCATTCCAATACGGCAAGTAAGAGTTGGAAA...GACGCATCTCCAGTTTTCGGGGGAAGCTGGTATTTGACATAGTGTGTTAAACAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR GCA 90 bp TATGGACCTTTTTGCTTTGGTGAAAACTTCAAAGTAAGGAGACACTGTCAATCAATGCCCTTCACGCGCTaGATCTCATCAATGACCAGG +
Preference number: 4 (lower is better)
Translates to: YGPFCFGENFKVRRHCQSMPFTR*ISSMTR
Trigger: CCTGGTCATTGATGAGATGCAGCGCGTGAAGGGCAT...TGATTGACAGTGTCTCCTTACTTTGAAGTTTTCACCAAAGCAAAAAGGTCCATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR GCA 90 bp AACACACTATGTCAAATACCAGCTTCCCCCGAAAACTGGAGATGCGTCTTGAGTTCTCTTCAATGGAATTaGCACTCACAAGCCTGTATA +
Preference number: 4 (lower is better)
Translates to: NTLCQIPASPENWRCVLSSLQWN*HSQACI
Trigger: TATACAGGCTTGTGAGTGGCAATTCCATTGAAGAGA...ACTCAAGACGCATCTCCAGTTTTCGGGGGAAGCTGGTATTTGACATAGTGTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CCA 90 bp CAAGCCACAGCACAAAGGATACTATTGGATATGGACCTTTTTGCTTTGGTGAAAGTCCACAGAAACCTGTaGGACAGAATACCTTCCTCA +
Preference number: 4 (lower is better)
Translates to: QATAQRILLDMDLFALVKVHRNL*DRIPSS
Trigger: TGAGGAAGGTATTCTGTCCCACAGGTTTCTGTGGAC...TTTCACCAAAGCAAAAAGGTCCATATCCAATAGTATCCTTTGTGCTGTGGCTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CCA 90 bp AGGTGGTTCTCTGCTTCACTGGCAGAACCACACAAGCTTATCCTAGAGAAAATCTCTTACTTGCCGTATTaGAATGAACCCAGATTCACA +
Preference number: 4 (lower is better)
Translates to: RWFSASLAEPHKLILEKISYLPY*NEPRFT
Trigger: TGTGAATCTGGGTTCATTCCAATACGGCAAGTAAGA...GATTTTCTCTAGGATAAGCTTGTGTGGTTCTGCCAGTGAAGCAGAGAACCACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CCA 90 bp AGAGGAAGCCATGTTGTCACTTTTTCCATGAGCCACGTAGTACAGAGAACGCGGATTTTGCCTTTTGTTTaGTATGCTATCAATGCCCTT +
Preference number: 4 (lower is better)
Translates to: RGSHVVTFSMSHVVQRTRILPFV*YAINAL
Trigger: AAGGGCATTGATAGCATACCAAACAAAAGGCAAAAT...CCGCGTTCTCTGTACTACGTGGCTCATGGAAAAAGTGACAACATGGCTTCCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CCA 90 bp TATGGACCTTTTTGCTTTGGTGAAAACTTCAAAGTAAGGAGACACTGTCAATCACACTGTACCCTTCCATaGCTAGGCAGGGCACAAATC +
Preference number: 4 (lower is better)
Translates to: YGPFCFGENFKVRRHCQSHCTLP*LGRAQI
Trigger: GATTTGTGCCCTGCCTAGCCATGGAAGGGTACAGTG...TGATTGACAGTGTCTCCTTACTTTGAAGTTTTCACCAAAGCAAAAAGGTCCATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CCA 90 bp AGGTGGTTCTCTGCTTCACTGGCAGAACCACACAAGCTTATCCTAGAGAAAATCTTTGGCATCCATCACTaGATTCAGGTCATTGTCATA +
Preference number: 4 (lower is better)
Translates to: RWFSASLAEPHKLILEKIFGIHH*IQVIVI
Trigger: TATGACAATGACCTGAATCCAGTGATGGATGCCAAA...GATTTTCTCTAGGATAAGCTTGTGTGGTTCTGCCAGTGAAGCAGAGAACCACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CCA 90 bp GCCAAAATCAAGCCACAGCACAAAGGATACTATTGGATATGGACCTTTTTGCTTACCACTCCTGAGCTTTaGCATCCATCACTGGATTCA +
Preference number: 4 (lower is better)
Translates to: AKIKPQHKGYYWIWTFLLTTPEL*HPSLDS
Trigger: TGAATCCAGTGATGGATGCCAAAGCTCAGGAGTGGT...AAGCAAAAAGGTCCATATCCAATAGTATCCTTTGTGCTGTGGCTTGATTTTGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CCA 90 bp ATTATATCTTTCCCAGTGCTGAATCTCTTGCGTGACATGGTCCCAAGGTTCACTGAGTTAAGAAAGCCATaGAGTAGTCATTTCCCTGAG +
Preference number: 4 (lower is better)
Translates to: IISFPVLNLLRDMVPRFTELRKP*SSHFPE
Trigger: CTCAGGGAAATGACTACTCCATGGCTTTCTTAACTC...AGTGAACCTTGGGACCATGTCACGCAAGAGATTCAGCACTGGGAAAGATATAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR TCA 90 bp CAAGCCACAGCACAAAGGATACTATTGGATATGGACCTTTTTGCTTTGGTGAAATATCAAGAGCTCAAGTaGGCTCCCCAGTTGATTTCA +
Preference number: 4 (lower is better)
Translates to: QATAQRILLDMDLFALVKYQELK*APQLIS
Trigger: TGAAATCAACTGGGGAGCTCACTTGAGCTCTTGATA...TTTCACCAAAGCAAAAAGGTCCATATCCAATAGTATCCTTTGTGCTGTGGCTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CCA 90 bp TGGGGGAGGCCACTGTTGGCTGCTCTTTGGAATAACAATGCAATGACTGATCATCACAAAGGATACTATTaGATATGGACCTTTTTGCTT +
Preference number: 4 (lower is better)
Translates to: WGRPLLAALWNNNAMTDHHKGYY*IWTFLL
Trigger: AAGCAAAAAGGTCCATATCCAATAGTATCCTTTGTG...ATGATCAGTCATTGCATTGTTATTCCAAAGAGCAGCCAACAGTGGCCTCCCCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CCA 90 bp TCTCCACATTTCTTATCAAGAGCTCAAGTGAGCTCCCCAGTTGATTTCACTGACTCTTACTTGCCGTATTaGAATGAACCCAGATTCACA +
Preference number: 4 (lower is better)
Translates to: SPHFLSRAQVSSPVDFTDSYLPY*NEPRFT
Trigger: TGTGAATCTGGGTTCATTCCAATACGGCAAGTAAGA...GTCAGTGAAATCAACTGGGGAGCTCACTTGAGCTCTTGATAAGAAATGTGGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CCA 90 bp ATTATATCTTTCCCAGTGCTGAATCTCTTGCGTGACATGGTCCCAAGGTTCACTACAATTTCTCTTCAATaGAATTGCCACTCACAAGCC +
Preference number: 4 (lower is better)
Translates to: IISFPVLNLLRDMVPRFTTISLQ*NCHSQA
Trigger: GGCTTGTGAGTGGCAATTCCATTGAAGAGAAATTGT...AGTGAACCTTGGGACCATGTCACGCAAGAGATTCAGCACTGGGAAAGATATAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR TCA 90 bp TATGGACCTTTTTGCTTTGGTGAAAACTTCAAAGTAAGGAGACACTGTCAATCAATCAGGCACCAAATCTaGACAAGGGCTTGGATCCAA +
Preference number: 4 (lower is better)
Translates to: YGPFCFGENFKVRRHCQSIRHQI*TRAWIQ
Trigger: TTGGATCCAAGCCCTTGTTCAGATTTGGTGCCTGAT...TGATTGACAGTGTCTCCTTACTTTGAAGTTTTCACCAAAGCAAAAAGGTCCATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR TCA 90 bp TATGGACCTTTTTGCTTTGGTGAAAACTTCAAAGTAAGGAGACACTGTCAATCAGTGATGGATGCCAGCTaGGCTATTTTCACTACCTCT +
Preference number: 4 (lower is better)
Translates to: YGPFCFGENFKVRRHCQSVMDAS*AIFTTS
Trigger: AGAGGTAGTGAAAATAGCTCAGCTGGCATCCATCAC...TGATTGACAGTGTCTCCTTACTTTGAAGTTTTCACCAAAGCAAAAAGGTCCATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR GCA 90 bp CAAGCCACAGCACAAAGGATACTATTGGATATGGACCTTTTTGCTTTGGTGAAATGCAGTTTCTGCTTCTaGATTTTGATGAGGTGTTCC +
Preference number: 4 (lower is better)
Translates to: QATAQRILLDMDLFALVKCSFCF*ILMRCS
Trigger: GGAACACCTCATCAAAATGCAGAAGCAGAAACTGCA...TTTCACCAAAGCAAAAAGGTCCATATCCAATAGTATCCTTTGTGCTGTGGCTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR GCA 90 bp TATGGACCTTTTTGCTTTGGTGAAAACTTCAAAGTAAGGAGACACTGTCAATCAAGAAAGTCCATTGTATaGTCCTCACACACGGCAGAC +
Preference number: 4 (lower is better)
Translates to: YGPFCFGENFKVRRHCQSRKSIV*SSHTAD
Trigger: GTCTGCCGTGTGTGAGGAGCATACAATGGACTTTCT...TGATTGACAGTGTCTCCTTACTTTGAAGTTTTCACCAAAGCAAAAAGGTCCATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR GCA 90 bp AACACACTATGTCAAATACCAGCTTCCCCCGAAAACTGGAGATGCGTCTTGAGTGGATATGGACCTTTTTaGTTTGGTGAAAACTTCAAA +
Preference number: 4 (lower is better)
Translates to: NTLCQIPASPENWRCVLSGYGPF*FGENFK
Trigger: TTTGAAGTTTTCACCAAAGCAAAAAGGTCCATATCC...ACTCAAGACGCATCTCCAGTTTTCGGGGGAAGCTGGTATTTGACATAGTGTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR GCA 90 bp TATGGACCTTTTTGCTTTGGTGAAAACTTCAAAGTAAGGAGACACTGTCAATCACTGTCAATAACATCCTaGAGAGACTCTCCACACCGA +
Preference number: 4 (lower is better)
Translates to: YGPFCFGENFKVRRHCQSLSITS*RDSPHR
Trigger: TCGGTGTGGAGAGTCTCTGCAGGATGTTATTGACAG...TGATTGACAGTGTCTCCTTACTTTGAAGTTTTCACCAAAGCAAAAAGGTCCATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CCA 90 bp TATGGACCTTTTTGCTTTGGTGAAAACTTCAAAGTAAGGAGACACTGTCAATCAGTCCACAGAAACCTGTaGGACAGAATACCTTCCTCA +
Preference number: 4 (lower is better)
Translates to: YGPFCFGENFKVRRHCQSVHRNL*DRIPSS
Trigger: TGAGGAAGGTATTCTGTCCCACAGGTTTCTGTGGAC...TGATTGACAGTGTCTCCTTACTTTGAAGTTTTCACCAAAGCAAAAAGGTCCATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR TCA 90 bp TACTTTTCTCCACATTTCTTATCAAGAGCTCAAGTGAGCTCCCCAGTTGATTTCCCCTGTGTAACCTTATaGCCACTTTATGGTAGTAAT +
Preference number: 4 (lower is better)
Translates to: YFSPHFLSRAQVSSPVDFPCVTL*PLYGSN
Trigger: ATTACTACCATAAAGTGGTCATAAGGTTACACAGGG...GAAATCAACTGGGGAGCTCACTTGAGCTCTTGATAAGAAATGTGGAGAAAAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CCA 90 bp ATAGTCTGTGTTCTCAAAGTTTCCAACTCTTACTTGCCGTATTGGAATGAACCCCCCATACAACAAAGATaGAGCATTAAACTTGACCGA +
Preference number: 4 (lower is better)
Translates to: IVCVLKVSNSYLPYWNEPPIQQR*SIKLDR
Trigger: TCGGTCAAGTTTAATGCTCCATCTTTGTTGTATGGG...GGGTTCATTCCAATACGGCAAGTAAGAGTTGGAAACTTTGAGAACACAGACTAT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000389561.7
3UTR CAA 72 bp TTAAGTCATATTTTAGGAGGGAAGGAAGGAACCATATaGCCTTTCTTTGGAATGGAAAACCCATCTCGGATG +
Preference number: 4 (lower is better)
Translates to: LSHILGGKEGTI*PFFGMENPSRM
Trigger: CATCCGAGATGGGTTTTCCATTCCAAAGAAAGGCAATATGGTTCCTTCCTTCCCTCCTAAAATATGACTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
3UTR CAA 72 bp TTTATAGTCTGTGTTCTCAAAGTTTCCAACTCTTACTaGCCGTATTGGAATGAACCCAGATTCACAAGGGGA +
Preference number: 4 (lower is better)
Translates to: FIVCVLKVSNSY*PYWNEPRFTRG
Trigger: TCCCCTTGTGAATCTGGGTTCATTCCAATACGGCAAGTAAGAGTTGGAAACTTTGAGAACACAGACTATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR GCA 90 bp TATGGACCTTTTTGCTTTGGTGAAAACTTCAAAGTAAGGAGACACTGTCAATCAATCCTAGAGAAAATCTaGTGTCGTAAGTCCACAAGG +
Preference number: 4 (lower is better)
Translates to: YGPFCFGENFKVRRHCQSILEKI*CRKSTR
Trigger: CCTTGTGGACTTACGACAGCAGATTTTCTCTAGGAT...TGATTGACAGTGTCTCCTTACTTTGAAGTTTTCACCAAAGCAAAAAGGTCCATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CCA 90 bp GCCAAAATCAAGCCACAGCACAAAGGATACTATTGGATATGGACCTTTTTGCTTTCCAGTCCTCTGCTTTaGTATGTTCAACTAACTAAA +
Preference number: 4 (lower is better)
Translates to: AKIKPQHKGYYWIWTFLLSSPLL*YVQLTK
Trigger: TTTAGTTAGTTGAACATACCAAAGCAGAGGACTGGA...AAGCAAAAAGGTCCATATCCAATAGTATCCTTTGTGCTGTGGCTTGATTTTGGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS CCA 90 bp TGGGCCTCAGGGCTGCGCTCCGGCCGCGTCAGGAGGGCGGGAGGATaGAAGCCGCGCCGCAGCCGCTCAGTGCATCCGGGGCCCCGGCGG +
Preference number: 5 (lower is better)
Translates to: WASGLRSGRVRRAGG*KPRRSRSVHPGPRR
Trigger: CCGCCGGGGCCCCGGATGCACTGAGCGGCTGCGGCGCGGCTTCCATCCTCCCGCCCTCCTGACGCGGCCGGAGCGCAGCCCTGAGGCCCA
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS GCA 90 bp GTCGCCGTGGCTGGGGAGCCGACTGCCCGTGGCGGGGGCTGGGTGTaGACCACCTGGGCGGGAGCAGAGCCTCCCGGCGTAGTCAAGGCC +
Preference number: 5 (lower is better)
Translates to: VAVAGEPTARGGGWV*TTWAGAEPPGVVKA
Trigger: GGCCTTGACTACGCCGGGAGGCTCTGCTCCCGCCCAGGTGGTGCACACCCAGCCCCCGCCACGGGCAGTCGGCTCCCCAGCCACGGCGAC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS CCA 90 bp GGCAGAGAACGTGGCGATGGGCGGCCGTCCTCGAAGCGGGCCCTGTaGAGCAGCAGAGGCCGTGGTGGGGGCTGCCGTCCGGGGCGGGTG +
Preference number: 5 (lower is better)
Translates to: GRERGDGRPSSKRAL*SSRGRGGGCRPGRV
Trigger: CACCCGCCCCGGACGGCAGCCCCCACCACGGCCTCTGCTGCTCCACAGGGCCCGCTTCGAGGACGGCCGCCCATCGCCACGTTCTCTGCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS CCA 90 bp CCACGCGGCCCGGAACGCCAACTTGTGGGGTCAAGGGTGCAGGGCTaGGACCGCCGGCCGGGGGCTTGCTTCCCAGGGCGCCGTGCACAG +
Preference number: 5 (lower is better)
Translates to: PRGPERQLVGSRVQG*DRRPGACFPGRRAQ
Trigger: CTGTGCACGGCGCCCTGGGAAGCAAGCCCCCGGCCGGCGGTCCCAGCCCTGCACCCTTGACCCCACAAGTTGGCGTTCCGGGCCGCGTGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS CCA 90 bp CTGCTGCTGCGGCGGCTGCGAGGTCTGCACTTGCACTTGGGCTGTTaGCTGCGGGGGCGCAGACTGGGCCTGTGGCGGTGGGGGCTGCGG +
Preference number: 5 (lower is better)
Translates to: LLLRRLRGLHLHLGC*LRGRRLGLWRWGLR
Trigger: CCGCAGCCCCCACCGCCACAGGCCCAGTCTGCGCCCCCGCAGCCAACAGCCCAAGTGCAAGTGCAGACCTCGCAGCCGCCGCAGCAGCAG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS CCA 90 bp TGTAACTTGGGCTGCTGGCTTGGGCTGTCGGAGCTGGCGGGCACCTaGGCTGGGTTGGGAGCGCCTGGAGTCTGGAGCGGGGCCGACGCC +
Preference number: 5 (lower is better)
Translates to: CNLGCWLGLSELAGT*AGLGAPGVWSGADA
Trigger: GGCGTCGGCCCCGCTCCAGACTCCAGGCGCTCCCAACCCAGCCCAGGTGCCCGCCAGCTCCGACAGCCCAAGCCAGCAGCCCAAGTTACA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330386.7
ENST00000389561.7
ENST00000611118.1
ENST00000611739.4
ENST00000616136.1
CDS CCA 90 bp ACCCTGAGTCGTTGCCATGGACACCAGGTCAGGGGTCGCCGTGGCTaGGGAGCCGACTGCCCGTGGCGGGGGCTGGGTGTGCACCACCTG +
Preference number: 5 (lower is better)
Translates to: TLSRCHGHQVRGRRG*GADCPWRGLGVHHL
Trigger: CAGGTGGTGCACACCCAGCCCCCGCCACGGGCAGTCGGCTCCCCAGCCACGGCGACCCCTGACCTGGTGTCCATGGCAACGACTCAGGGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS CCA 90 bp CCCATCCCTGCCGCTGCCTCCAGGCCTACCTCTGCCCATGCGGCATaGCCGCCAGCTTCTCCTCCAGGAGGCCTGGCCGTTGCCTGCAGC +
Preference number: 5 (lower is better)
Translates to: PIPAAASRPTSAHAA*PPASPPGGLAVACS
Trigger: GCTGCAGGCAACGGCCAGGCCTCCTGGAGGAGAAGCTGGCGGCCATGCCGCATGGGCAGAGGTAGGCCTGGAGGCAGCGGCAGGGATGGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616136.1
CDS GCA 90 bp GCGGCATGGCCGCCAGCTTCTCCTCCAGGAGGCCTGGCCGTTGCCTaGAGCCCACCCCACCCGGGACACTGCTCCCTGAATAGTCGGGCT +
Preference number: 5 (lower is better)
Translates to: AAWPPASPPGGLAVA*SPPHPGHCSLNSRA
Trigger: AGCCCGACTATTCAGGGAGCAGTGTCCCGGGTGGGGTGGGCTGCAGGCAACGGCCAGGCCTCCTGGAGGAGAAGCTGGCGGCCATGCCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616136.1
CDS TCA 90 bp CACGCTGATCCCCGCGACGTTCATGGGCAGGGTGGTGACTCCCGGTaGGGAGACCACAGCTGCCGGGACGGACACCACCGGAGGCTTCGC +
Preference number: 5 (lower is better)
Translates to: HADPRDVHGQGGDSR*GDHSCRDGHHRRLR
Trigger: GCGAAGCCTCCGGTGGTGTCCGTCCCGGCAGCTGTGGTCTCCTCACCGGGAGTCACCACCCTGCCCATGAACGTCGCGGGGATCAGCGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330386.7
ENST00000389561.7
ENST00000611739.4
CDS CCA 90 bp GGGCTGCTGCTGCTTTTGCCTCCGGATTGGCAGAGAACGTGGCGATaGGCGGCCGTCCTCGAAGCGGGCCCTGTGGAGCAGCAGAGGCCG +
Preference number: 5 (lower is better)
Translates to: GLLLLLPPDWQRTWR*AAVLEAGPVEQQRP
Trigger: CGGCCTCTGCTGCTCCACAGGGCCCGCTTCGAGGACGGCCGCCCATCGCCACGTTCTCTGCCAATCCGGAGGCAAAAGCAGCAGCAGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS CCA 90 bp GGCGGGAGCAGAGCCTCCCGGCGTAGTCAAGGCCCCAGGAGCCACTaGCGACGCCAGGCGCTTGTTGATGGACTGGAAGGTGGCAGCTGG +
Preference number: 5 (lower is better)
Translates to: GGSRASRRSQGPRSH*RRQALVDGLEGGSW
Trigger: CCAGCTGCCACCTTCCAGTCCATCAACAAGCGCCTGGCGTCGCCAGTGGCTCCTGGGGCCTTGACTACGCCGGGAGGCTCTGCTCCCGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS TCA 90 bp GCCTGGCCGTTGCCTGCAGCCCACCCCACCCGGGACACTGCTCCCTaGATAGTCGGGCTGGTGGGGCACCCTGACACCCTTGTCACACCT +
Preference number: 5 (lower is better)
Translates to: AWPLPAAHPTRDTAP*IVGLVGHPDTLVTP
Trigger: AGGTGTGACAAGGGTGTCAGGGTGCCCCACCAGCCCGACTATTCAGGGAGCAGTGTCCCGGGTGGGGTGGGCTGCAGGCAACGGCCAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616136.1
CDS GCA 90 bp ACCACCTGGGCAGTCGCGGTCACTGCAGGGATCATCTGCACCTGCTaGCCGGCCGCCGTCGCCTGCGTGAGCGCCACAGTCTGTGGAGAA +
Preference number: 5 (lower is better)
Translates to: TTWAVAVTAGIICTC*PAAVACVSATVCGE
Trigger: TTCTCCACAGACTGTGGCGCTCACGCAGGCGACGGCGGCCGGGCAGCAGGTGCAGATGATCCCTGCAGTGACCGCGACTGCCCAGGTGGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330386.7
ENST00000389561.7
ENST00000611118.1
ENST00000611739.4
ENST00000616136.1
CDS GCA 90 bp ACCAGCCTCAGCTCAGGGAACTGCAGCAGGCGTGGAGCCGTGGTCTaGCGCAGCTGCTGGAAGTACGGCGCAGCGTGCTCTCTCAGGCCC +
Preference number: 5 (lower is better)
Translates to: TSLSSGNCSRRGAVV*RSCWKYGAACSLRP
Trigger: GGGCCTGAGAGAGCACGCTGCGCCGTACTTCCAGCAGCTGCGGCAGACCACGGCTCCACGCCTGCTGCAGTTCCCTGAGCTGAGGCTGGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389561.7
ENST00000611841.1
CDS GCA 90 bp TTAGGGCCGCAGAGACCATGCCGCGCTCAAGACTCCCGGGACGCCTaGCCGCTCTGGGCCCTATGGCAGAACCCAGCCCCTTTCCAGCCT +
Preference number: 5 (lower is better)
Translates to: LGPQRPCRAQDSRDA*PLWALWQNPAPFQP
Trigger: AGGCTGGAAAGGGGCTGGGTTCTGCCATAGGGCCCAGAGCGGGCAGGCGTCCCGGGAGTCTTGAGCGCGGCATGGTCTCTGCGGCCCTAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616136.1
CDS CCA 90 bp GGACCCTCATCTGTAACTTGGGCTGCTGGCTTGGGCTGTCGGAGCTaGCGGGCACCTGGGCTGGGTTGGGAGCGCCTGGAGTCTGGAGCG +
Preference number: 5 (lower is better)
Translates to: GPSSVTWAAGLGCRS*RAPGLGWERLESGA
Trigger: CGCTCCAGACTCCAGGCGCTCCCAACCCAGCCCAGGTGCCCGCCAGCTCCGACAGCCCAAGCCAGCAGCCCAAGTTACAGATGAGGGTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330386.7
ENST00000389561.7
ENST00000611118.1
ENST00000611739.4
ENST00000616136.1
CDS CCA 90 bp AGATGCGGACGGATACTCCAGTGGCCCCGCCACGTAGGAAGAGCCTaGGTGCCGGGGCTCGACGAGCCCAGGGTGGTTGCAGATGCGCTG +
Preference number: 5 (lower is better)
Translates to: RCGRILQWPRHVGRA*VPGLDEPRVVADAL
Trigger: CAGCGCATCTGCAACCACCCTGGGCTCGTCGAGCCCCGGCACCCAGGCTCTTCCTACGTGGCGGGGCCACTGGAGTATCCGTCCGCATCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS CCA 90 bp GGGTCTGAGGGCCCACACCAGCCATCCGAAGCCCGGGACTTGGGCTaGGTGCCACCGATGAGCCACCACGAGCAGAAGTCCCTGGAGGCA +
Preference number: 5 (lower is better)
Translates to: GSEGPHQPSEARDLG*VPPMSHHEQKSLEA
Trigger: TGCCTCCAGGGACTTCTGCTCGTGGTGGCTCATCGGTGGCACCCAGCCCAAGTCCCGGGCTTCGGATGGCTGGTGTGGGCCCTCAGACCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616136.1
CDS CCA 90 bp TGGGGATGCAGGCTGGTCTTTGGAACCCGGCCACGGCGGAGCTGGTaGCACTACCCAGACACCCTGCGCCTCCCGGCTTTGTGTCCCCTC +
Preference number: 5 (lower is better)
Translates to: WGCRLVFGTRPRRSW*HYPDTLRLPALCPL
Trigger: GAGGGGACACAAAGCCGGGAGGCGCAGGGTGTCTGGGTAGTGCCACCAGCTCCGCCGTGGCCGGGTTCCAAAGACCAGCCTGCATCCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616136.1
CDS CCA 90 bp CAGAGACCATGCCGCGCTCAAGACTCCCGGGACGCCTGCCCGCTCTaGGCCCTATGGCAGAACCCAGCCCCTTTCCAGCCTACCTCCCAG +
Preference number: 5 (lower is better)
Translates to: QRPCRAQDSRDACPL*ALWQNPAPFQPTSQ
Trigger: CTGGGAGGTAGGCTGGAAAGGGGCTGGGTTCTGCCATAGGGCCCAGAGCGGGCAGGCGTCCCGGGAGTCTTGAGCGCGGCATGGTCTCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616136.1
CDS GCA 90 bp GTCACTGCAGGGATCATCTGCACCTGCTGCCCGGCCGCCGTCGCCTaGGTGAGCGCCACAGTCTGTGGAGAAGCCTGCTGGGAAGCAGAG +
Preference number: 5 (lower is better)
Translates to: VTAGIICTCCPAAVA*VSATVCGEACWEAE
Trigger: CTCTGCTTCCCAGCAGGCTTCTCCACAGACTGTGGCGCTCACGCAGGCGACGGCGGCCGGGCAGCAGGTGCAGATGATCCCTGCAGTGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330386.7
ENST00000389561.7
ENST00000611118.1
ENST00000611739.4
ENST00000616136.1
CDS GCA 90 bp CCTGGGTGCCGGGGCTCGACGAGCCCAGGGTGGTTGCAGATGCGCTaGAGCCGCACAAGGATGCTCAGGACGTTGACAAAGTGCCCGCTC +
Preference number: 5 (lower is better)
Translates to: PGCRGSTSPGWLQMR*SRTRMLRTLTKCPL
Trigger: GAGCGGGCACTTTGTCAACGTCCTGAGCATCCTTGTGCGGCTGCAGCGCATCTGCAACCACCCTGGGCTCGTCGAGCCCCGGCACCCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS GCA 90 bp AGCTCAGGGAACTGCAGCAGGCGTGGAGCCGTGGTCTGCCGCAGCTaGTGGAAGTACGGCGCAGCGTGCTCTCTCAGGCCCTGCCTCAAG +
Preference number: 5 (lower is better)
Translates to: SSGNCSRRGAVVCRS*WKYGAACSLRPCLK
Trigger: CTTGAGGCAGGGCCTGAGAGAGCACGCTGCGCCGTACTTCCAGCAGCTGCGGCAGACCACGGCTCCACGCCTGCTGCAGTTCCCTGAGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389561.7
ENST00000611841.1
CDS GCA 90 bp GGCCGAGGCTGTCACAGAAGTGACCGCTCGAACACCCTGAGTCGTTaGCATGGACACCAGGTCAGGGGTCGCCGTGGCTGGGGAGCCGAC +
Preference number: 5 (lower is better)
Translates to: GRGCHRSDRSNTLSR*HGHQVRGRRGWGAD
Trigger: GTCGGCTCCCCAGCCACGGCGACCCCTGACCTGGTGTCCATGGCAACGACTCAGGGTGTTCGAGCGGTCACTTCTGTGACAGCCTCGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS CCA 90 bp GTGTGGGAACGTGGAGGGCCAGCTGTGCAGGCTGCGAGGGAGGGATaGGGAGTTGGCTGCTGGGCGGTGCAGGGATGGGAACATTGGGCT +
Preference number: 5 (lower is better)
Translates to: VWERGGPAVQAAREG*GVGCWAVQGWEHWA
Trigger: AGCCCAATGTTCCCATCCCTGCACCGCCCAGCAGCCAACTCCCCATCCCTCCCTCGCAGCCTGCACAGCTGGCCCTCCACGTTCCCACAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332482.8
ENST00000333577.8
ENST00000389561.7
CDS CCA 90 bp GAAACGGGGCTGCTGCTGCTTTTGCCTCCGGATTGGCAGAGAACGTaGCGATGGGCGGCCGTCCTCGAAGCGGGCCCTGTGGAGCAGCAG +
Preference number: 5 (lower is better)
Translates to: ETGLLLLLPPDWQRT*RWAAVLEAGPVEQQ
Trigger: CTGCTGCTCCACAGGGCCCGCTTCGAGGACGGCCGCCCATCGCCACGTTCTCTGCCAATCCGGAGGCAAAAGCAGCAGCAGCCCCGTTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS CCA 90 bp AAGTGGGGATGCAGGCTGGTCTTTGGAACCCGGCCACGGCGGAGCTaGTGGCACTACCCAGACACCCTGCGCCTCCCGGCTTTGTGTCCC +
Preference number: 5 (lower is better)
Translates to: KWGCRLVFGTRPRRS*WHYPDTLRLPALCP
Trigger: GGGACACAAAGCCGGGAGGCGCAGGGTGTCTGGGTAGTGCCACCAGCTCCGCCGTGGCCGGGTTCCAAAGACCAGCCTGCATCCCCACTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616136.1
CDS TCA 90 bp GTGACCACGGCCGAGGCTGTCACAGAAGTGACCGCTCGAACACCCTaGGTCGTTGCCATGGACACCAGGTCAGGGGTCGCCGTGGCTGGG +
Preference number: 5 (lower is better)
Translates to: VTTAEAVTEVTARTP*VVAMDTRSGVAVAG
Trigger: CCCAGCCACGGCGACCCCTGACCTGGTGTCCATGGCAACGACTCAGGGTGTTCGAGCGGTCACTTCTGTGACAGCCTCGGCCGTGGTCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS TCA 90 bp CCAGAACACAAGAGAGGCTCCAGCGTGGGCAGCTGCTGGGGGCCCTaGTTTCAAGGGCCCTCCCTGCACAAGGCCCTCACGGACCCTGGT +
Preference number: 5 (lower is better)
Translates to: PEHKRGSSVGSCWGP*FQGPSLHKALTDPG
Trigger: ACCAGGGTCCGTGAGGGCCTTGTGCAGGGAGGGCCCTTGAAATCAGGGCCCCCAGCAGCTGCCCACGCTGGAGCCTCTCTTGTGTTCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611118.1
CDS GCA 90 bp TGGAGCTGTGTCTGGGCCTCTACCACTTGCGGCTGCTGTGCAAACTaGAGCGCAGAGGAGAGGGCTGCAGTGGGAACACCGGCTGGGGGC +
Preference number: 5 (lower is better)
Translates to: WSCVWASTTCGCCAN*SAEERAAVGTPAGG
Trigger: GCCCCCAGCCGGTGTTCCCACTGCAGCCCTCTCCTCTGCGCTGCAGTTTGCACAGCAGCCGCAAGTGGTAGAGGCCCAGACACAGCTCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332482.8
ENST00000333577.8
ENST00000389561.7
CDS GCA 90 bp TGCCGCAGCTGCTGGAAGTACGGCGCAGCGTGCTCTCTCAGGCCCTaGCTCAAGATCCTCATTCTGTGGCTGTACAGGGGTGGCGGCCGC +
Preference number: 5 (lower is better)
Translates to: CRSCWKYGAACSLRP*LKILILWLYRGGGR
Trigger: GCGGCCGCCACCCCTGTACAGCCACAGAATGAGGATCTTGAGGCAGGGCCTGAGAGAGCACGCTGCGCCGTACTTCCAGCAGCTGCGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389561.7
ENST00000611841.1
CDS GCA 90 bp CCAGCGTGGGCAGCTGCTGGGGGCCCTGATTTCAAGGGCCCTCCCTaGACAAGGCCCTCACGGACCCTGGTCTCTTGCTGGGTCCTGTTA +
Preference number: 5 (lower is better)
Translates to: PAWAAAGGPDFKGPP*TRPSRTLVSCWVLL
Trigger: TAACAGGACCCAGCAAGAGACCAGGGTCCGTGAGGGCCTTGTGCAGGGAGGGCCCTTGAAATCAGGGCCCCCAGCAGCTGCCCACGCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611118.1
CDS GCA 90 bp CCCAAAGGACATGCACTTCCCTGCAGCGGTCGTGCCAAGTGGGGATaGAGGCTGGTCTTTGGAACCCGGCCACGGCGGAGCTGGTGGCAC +
Preference number: 5 (lower is better)
Translates to: PKGHALPCSGRAKWG*RLVFGTRPRRSWWH
Trigger: GTGCCACCAGCTCCGCCGTGGCCGGGTTCCAAAGACCAGCCTGCATCCCCACTTGGCACGACCGCTGCAGGGAAGTGCATGTCCTTTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616136.1
CDS CCA 90 bp CTGCCTTGCAGCTGCAGCGGCTGGCCCGCTGTGAGCTGCCGGAGCTaGCTGTGTGACAGGGTGAACTTGCTGCCCTGGAACTGCAGTGTC +
Preference number: 5 (lower is better)
Translates to: LPCSCSGWPAVSCRS*LCDRVNLLPWNCSV
Trigger: GACACTGCAGTTCCAGGGCAGCAAGTTCACCCTGTCACACAGCCAGCTCCGGCAGCTCACAGCGGGCCAGCCGCTGCAGCTGCAAGGCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS CCA 90 bp TCAGGGAACTGCAGCAGGCGTGGAGCCGTGGTCTGCCGCAGCTGCTaGAAGTACGGCGCAGCGTGCTCTCTCAGGCCCTGCCTCAAGATC +
Preference number: 5 (lower is better)
Translates to: SGNCSRRGAVVCRSC*KYGAACSLRPCLKI
Trigger: GATCTTGAGGCAGGGCCTGAGAGAGCACGCTGCGCCGTACTTCCAGCAGCTGCGGCAGACCACGGCTCCACGCCTGCTGCAGTTCCCTGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389561.7
ENST00000611841.1
CDS CCA 90 bp ACTGCACCAGCCTCAGCTCAGGGAACTGCAGCAGGCGTGGAGCCGTaGTCTGCCGCAGCTGCTGGAAGTACGGCGCAGCGTGCTCTCTCA +
Preference number: 5 (lower is better)
Translates to: TAPASAQGTAAGVEP*SAAAAGSTAQRALS
Trigger: TGAGAGAGCACGCTGCGCCGTACTTCCAGCAGCTGCGGCAGACCACGGCTCCACGCCTGCTGCAGTTCCCTGAGCTGAGGCTGGTGCAGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389561.7
ENST00000611841.1
CDS CCA 90 bp ACTTCCCTGCAGCGGTCGTGCCAAGTGGGGATGCAGGCTGGTCTTTaGAACCCGGCCACGGCGGAGCTGGTGGCACTACCCAGACACCCT +
Preference number: 5 (lower is better)
Translates to: TSLQRSCQVGMQAGL*NPATAELVALPRHP
Trigger: AGGGTGTCTGGGTAGTGCCACCAGCTCCGCCGTGGCCGGGTTCCAAAGACCAGCCTGCATCCCCACTTGGCACGACCGCTGCAGGGAAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616136.1
CDS CCA 90 bp GACATGCACTTCCCTGCAGCGGTCGTGCCAAGTGGGGATGCAGGCTaGTCTTTGGAACCCGGCCACGGCGGAGCTGGTGGCACTACCCAG +
Preference number: 5 (lower is better)
Translates to: DMHFPAAVVPSGDAG*SLEPGHGGAGGTTQ
Trigger: CTGGGTAGTGCCACCAGCTCCGCCGTGGCCGGGTTCCAAAGACCAGCCTGCATCCCCACTTGGCACGACCGCTGCAGGGAAGTGCATGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616136.1
CDS CCA 90 bp TCCCGACCCAAAGGACATGCACTTCCCTGCAGCGGTCGTGCCAAGTaGGGATGCAGGCTGGTCTTTGGAACCCGGCCACGGCGGAGCTGG +
Preference number: 5 (lower is better)
Translates to: SRPKGHALPCSGRAK*GCRLVFGTRPRRSW
Trigger: CCAGCTCCGCCGTGGCCGGGTTCCAAAGACCAGCCTGCATCCCCACTTGGCACGACCGCTGCAGGGAAGTGCATGTCCTTTGGGTCGGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616136.1
CDS TCA 90 bp GAGTCTGGAGCGGGGCCGACGCCGTGGTCACCACCTGCTGCTGAATaGGTTTCTGCTGAACCACCTGGGCAGTCGCGGTCACTGCAGGGA +
Preference number: 5 (lower is better)
Translates to: ESGAGPTPWSPPAAE*VSAEPPGQSRSLQG
Trigger: TCCCTGCAGTGACCGCGACTGCCCAGGTGGTTCAGCAGAAACTCATTCAGCAGCAGGTGGTGACCACGGCGTCGGCCCCGCTCCAGACTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330386.7
ENST00000389561.7
ENST00000611118.1
ENST00000611739.4
ENST00000616136.1
CDS GCA 90 bp CTGCTGAATGAGTTTCTGCTGAACCACCTGGGCAGTCGCGGTCACTaGAGGGATCATCTGCACCTGCTGCCCGGCCGCCGTCGCCTGCGT +
Preference number: 5 (lower is better)
Translates to: LLNEFLLNHLGSRGH*RDHLHLLPGRRRLR
Trigger: ACGCAGGCGACGGCGGCCGGGCAGCAGGTGCAGATGATCCCTGCAGTGACCGCGACTGCCCAGGTGGTTCAGCAGAAACTCATTCAGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330386.7
ENST00000389561.7
ENST00000611118.1
ENST00000611739.4
ENST00000616136.1
CDS GCA 90 bp CCTGCCTACAGCGGTCACCTGAGAGCAGCTTCAGAGACCGCCACCTaGCCATGCCTACGGCTTACATGCACAGCGCCCTCTGCTCCAGCC +
Preference number: 5 (lower is better)
Translates to: PAYSGHLRAASETAT*PCLRLTCTAPSAPA
Trigger: GGCTGGAGCAGAGGGCGCTGTGCATGTAAGCCGTAGGCATGGGCAGGTGGCGGTCTCTGAAGCTGCTCTCAGGTGACCGCTGTAGGCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611739.4
CDS GCA 90 bp GTGACCATCCCGACCCAAAGGACATGCACTTCCCTGCAGCGGTCGTaGCAAGTGGGGATGCAGGCTGGTCTTTGGAACCCGGCCACGGCG +
Preference number: 5 (lower is better)
Translates to: VTIPTQRTCTSLQRS*QVGMQAGLWNPATA
Trigger: CGCCGTGGCCGGGTTCCAAAGACCAGCCTGCATCCCCACTTGGCACGACCGCTGCAGGGAAGTGCATGTCCTTTGGGTCGGGATGGTCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616136.1
CDS GCA 90 bp AAGCCTGAGGGACCACACCCACCTGTGCATCAGCATGGCCACGTCTaGCCATGGACCACCATGACGCACCCAGGGACTGCTGACCAGGCC +
Preference number: 5 (lower is better)
Translates to: KPEGPHPPVHQHGHV*PWTTMTHPGTADQA
Trigger: GGCCTGGTCAGCAGTCCCTGGGTGCGTCATGGTGGTCCATGGGCAGACGTGGCCATGCTGATGCACAGGTGGGTGTGGTCCCTCAGGCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616136.1
CDS GCA 90 bp CGCGCCAGGGGTGGTGATCTGCTGTGCGGTGATCTGGGGAGAGACTaGGAAATTAGGGCCGCAGAGACCATGCCGCGCTCAAGACTCCCG +
Preference number: 5 (lower is better)
Translates to: RARGGDLLCGDLGRD*EIRAAETMPRSRLP
Trigger: CGGGAGTCTTGAGCGCGGCATGGTCTCTGCGGCCCTAATTTCGCAGTCTCTCCCCAGATCACCGCACAGCAGATCACCACCCCTGGCGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616136.1
CDS CCA 90 bp GGCTCTCTTCACTGGGGGCCCTCAGAGGGGAGCTCAGGTAGGGCCTaGAGATCCCTGGGACCAGGAAGTGCACCATGGTCCAGAGCTCCA +
Preference number: 5 (lower is better)
Translates to: GSLHWGPSEGSSGRA*RSLGPGSAPWSRAP
Trigger: TGGAGCTCTGGACCATGGTGCACTTCCTGGTCCCAGGGATCTCCAGGCCCTACCTGAGCTCCCCTCTGAGGGCCCCCAGTGAAGAGAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS TCA 90 bp TCCTCTCCGCTTGTGTCCTCCCCATCAGGCTTCGGCCGGGGCCACTaGGAACTCGGCAGGAAGGCGCCTTCGTACAGCTTCATCAGGTCC +
Preference number: 5 (lower is better)
Translates to: SSPLVSSPSGFGRGH*ELGRKAPSYSFIRS
Trigger: GGACCTGATGAAGCTGTACGAAGGCGCCTTCCTGCCGAGTTCTCAGTGGCCCCGGCCGAAGCCTGATGGGGAGGACACAAGCGGAGAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS TCA 90 bp CCTTCTAGCTCTAGCCAGACAGCAGTGCCAACAGAACGTGGGGTCTaGGGGCCCACACCAGCCATCCGAAGCCCGGGACTTGGGCTGGGT +
Preference number: 5 (lower is better)
Translates to: PSSSSQTAVPTERGV*GPTPAIRSPGLGLG
Trigger: ACCCAGCCCAAGTCCCGGGCTTCGGATGGCTGGTGTGGGCCCTCAGACCCCACGTTCTGTTGGCACTGCTGTCTGGCTAGAGCTAGAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616136.1
CDS TCA 90 bp CTTCAGCTGCAGCCCTCCACTGCTCCCTCAAGCACAGCTCAAGCCTaGGGGACCACACCCACCTGTGCATCAGCATGGCCACGTCTGCCC +
Preference number: 5 (lower is better)
Translates to: LQLQPSTAPSSTAQA*GTTPTCASAWPRLP
Trigger: GGGCAGACGTGGCCATGCTGATGCACAGGTGGGTGTGGTCCCTCAGGCTTGAGCTGTGCTTGAGGGAGCAGTGGAGGGCTGCAGCTGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616136.1
CDS GCA 90 bp CGGGATTTGGAGCTGTGTCTGGGCCTCTACCACTTGCGGCTGCTGTaGAAACTGCAGCGCAGAGGAGAGGGCTGCAGTGGGAACACCGGC +
Preference number: 5 (lower is better)
Translates to: RDLELCLGLYHLRLL*KLQRRGEGCSGNTG
Trigger: GCCGGTGTTCCCACTGCAGCCCTCTCCTCTGCGCTGCAGTTTGCACAGCAGCCGCAAGTGGTAGAGGCCCAGACACAGCTCCAAATCCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332482.8
ENST00000333577.8
ENST00000389561.7
CDS GCA 90 bp CTGTGCAGGCTGCGAGGGAGGGATGGGGAGTTGGCTGCTGGGCGGTaGAGGGATGGGAACATTGGGCTGCTGAGTCTTCACCGGGATTTG +
Preference number: 5 (lower is better)
Translates to: LCRLRGRDGELAAGR*RDGNIGLLSLHRDL
Trigger: CAAATCCCGGTGAAGACTCAGCAGCCCAATGTTCCCATCCCTGCACCGCCCAGCAGCCAACTCCCCATCCCTCCCTCGCAGCCTGCACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332482.8
ENST00000333577.8
ENST00000389561.7
CDS GCA 90 bp CGTGGAGCCGTGGTCTGCCGCAGCTGCTGGAAGTACGGCGCAGCGTaGTCTCTCAGGCCCTGCCTCAAGATCCTCATTCTGTGGCTGTAC +
Preference number: 5 (lower is better)
Translates to: RGAVVCRSCWKYGAA*SLRPCLKILILWLY
Trigger: GTACAGCCACAGAATGAGGATCTTGAGGCAGGGCCTGAGAGAGCACGCTGCGCCGTACTTCCAGCAGCTGCGGCAGACCACGGCTCCACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389561.7
ENST00000611841.1
CDS CCA 90 bp CAGGGTGAACTTGCTGCCCTGGAACTGCAGTGTCACCGGCGTCTCTaGCTGAGCCACGCGGCTCTGTGGTCCTGTGATGGATGCCAGCTG +
Preference number: 5 (lower is better)
Translates to: QGELAALELQCHRRL*LSHAALWSCDGCQL
Trigger: CAGCTGGCATCCATCACAGGACCACAGAGCCGCGTGGCTCAGCCAGAGACGCCGGTGACACTGCAGTTCCAGGGCAGCAAGTTCACCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS CCA 90 bp AAGGCCCCAGGAGCCACTGGCGACGCCAGGCGCTTGTTGATGGACTaGAAGGTGGCAGCTGGGACCCCTGCGATGGTGTTCACGATCACA +
Preference number: 5 (lower is better)
Translates to: KAPGATGDARRLLMD*KVAAGTPAMVFTIT
Trigger: TGTGATCGTGAACACCATCGCAGGGGTCCCAGCTGCCACCTTCCAGTCCATCAACAAGCGCCTGGCGTCGCCAGTGGCTCCTGGGGCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS CCA 90 bp GGCTTGGGACACTTGGGGCACCAAAGACCGTGCCGGGGTCTGCACTaGGGTCAGGTTGGTAGTGACCACGGCCGAGGCTGTCACAGAAGT +
Preference number: 5 (lower is better)
Translates to: GLGHLGHQRPCRGLH*GQVGSDHGRGCHRS
Trigger: ACTTCTGTGACAGCCTCGGCCGTGGTCACTACCAACCTGACCCCAGTGCAGACCCCGGCACGGTCTTTGGTGCCCCAAGTGTCCCAAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS CCA 90 bp CCAGCACAGCGCTCAGGGAACAGGGCAGCTCCCCACACAGCCATGTaGCTTCCCATCAGAGCCCGCCTTCTAGCTCTAGCCAGACAGCAG +
Preference number: 5 (lower is better)
Translates to: PAQRSGNRAAPHTAM*LPIRARLLALARQQ
Trigger: CTGCTGTCTGGCTAGAGCTAGAAGGCGGGCTCTGATGGGAAGCCACATGGCTGTGTGGGGAGCTGCCCTGTTCCCTGAGCGCTGTGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616136.1
CDS CCA 90 bp ACCTTCTGCTGCGCGCCAGGGGTGGTGATCTGCTGTGCGGTGATCTaGGGAGAGACTGCGAAATTAGGGCCGCAGAGACCATGCCGCGCT +
Preference number: 5 (lower is better)
Translates to: TFCCAPGVVICCAVI*GETAKLGPQRPCRA
Trigger: AGCGCGGCATGGTCTCTGCGGCCCTAATTTCGCAGTCTCTCCCCAGATCACCGCACAGCAGATCACCACCCCTGGCGCGCAGCAGAAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616136.1
CDS-3UTR CAA 90 bp TCCATTGTATGCTCCTCACACACGGCAGACGGCTTCTGTGGCGTGCAAAGCACTCGGGCCACCTGGAGGTaGGCCACGGTGGTGCCCGTC +
Preference number: 5 (lower is better)
Translates to: SIVCSSHTADGFCGVQSTRATWR*ATVVPV
Trigger: GACGGGCACCACCGTGGCCAACCTCCAGGTGGCCCG...AGTGCTTTGCACGCCACAGAAGCCGTCTGCCGTGTGTGAGGAGCATACAATGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS TCA 90 bp TGTGCTGGGGACTGGGCCTGGCCCTGGATCTGTGGAACTTGCACCTaGGAGGTCGTCGTCGTCTGTTGCTGCTGCTGCTGTTGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: CAGDWAWPWICGTCT*EVVVVCCCCCCCCC
Trigger: GCAGCAGCAACAGCAGCAGCAGCAACAGACGACGACGACCTCTCAGGTGCAAGTTCCACAGATCCAGGGCCAGGCCCAGTCCCCAGCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS GCA 90 bp CGGCGTCTCTGGCTGAGCCACGCGGCTCTGTGGTCCTGTGATGGATaGCAGCTGAGCTATTTTCACTACCTCTCCACTGGGCAAGCGGGC +
Preference number: 5 (lower is better)
Translates to: RRLWLSHAALWSCDG*QLSYFHYLSTGQAG
Trigger: GCCCGCTTGCCCAGTGGAGAGGTAGTGAAAATAGCTCAGCTGGCATCCATCACAGGACCACAGAGCCGCGTGGCTCAGCCAGAGACGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS GCA 90 bp TCCAACTTCCCTGAGTCGAACTGCACCAGCCTCAGCTCAGGGAACTaGAGCAGGCGTGGAGCCGTGGTCTGCCGCAGCTGCTGGAAGTAC +
Preference number: 5 (lower is better)
Translates to: SNFPESNCTSLSSGN*SRRGAVVCRSCWKY
Trigger: GTACTTCCAGCAGCTGCGGCAGACCACGGCTCCACGCCTGCTGCAGTTCCCTGAGCTGAGGCTGGTGCAGTTCGACTCAGGGAAGTTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389561.7
ENST00000611841.1
CDS GCA 90 bp TACAGCGGTCACCTGAGAGCAGCTTCAGAGACCGCCACCTGCCCATaGCTACGGCTTACATGCACAGCGCCCTCTGCTCCAGCCACACAG +
Preference number: 5 (lower is better)
Translates to: YSGHLRAASETATCP*LRLTCTAPSAPATQ
Trigger: CTGTGTGGCTGGAGCAGAGGGCGCTGTGCATGTAAGCCGTAGGCATGGGCAGGTGGCGGTCTCTGAAGCTGCTCTCAGGTGACCGCTGTA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611739.4
CDS GCA 90 bp GCACTACCCAGACACCCTGCGCCTCCCGGCTTTGTGTCCCCTCAGTaGTCACTCCCTCTCCCTCTGGGTTCCAAAGGACAGCTCTGCTTC +
Preference number: 5 (lower is better)
Translates to: ALPRHPAPPGFVSPQ*SLPLPLGSKGQLCF
Trigger: GAAGCAGAGCTGTCCTTTGGAACCCAGAGGGAGAGGGAGTGAGCACTGAGGGGACACAAAGCCGGGAGGCGCAGGGTGTCTGGGTAGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616136.1
CDS CCA 90 bp ACTGGGGGCCCTCAGAGGGGAGCTCAGGTAGGGCCTGGAGATCCCTaGGACCAGGAAGTGCACCATGGTCCAGAGCTCCAGGAAGGTATT +
Preference number: 5 (lower is better)
Translates to: TGGPQRGAQVGPGDP*DQEVHHGPELQEGI
Trigger: AATACCTTCCTGGAGCTCTGGACCATGGTGCACTTCCTGGTCCCAGGGATCTCCAGGCCCTACCTGAGCTCCCCTCTGAGGGCCCCCAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS CCA 90 bp ATTGCTGCACACCAGCAGGGCTTCACCCATAGGGCCCCTGGGCACTaGTCTTCTGCAGGAGGTAGCAGCGGCTCACAGCACAGCCAGTGT +
Preference number: 5 (lower is better)
Translates to: IAAHQQGFTHRAPGH*SSAGGSSGSQHSQC
Trigger: ACACTGGCTGTGCTGTGAGCCGCTGCTACCTCCTGCAGAAGACCAGTGCCCAGGGGCCCTATGGGTGAAGCCCTGCTGGTGTGCAGCAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616136.1
CDS TCA 90 bp GGGAGTTGGCTGCTGGGCGGTGCAGGGATGGGAACATTGGGCTGCTaGGTCTTCACCGGGATTTGGAGCTGTGTCTGGGCCTCTACCACT +
Preference number: 5 (lower is better)
Translates to: GSWLLGGAGMGTLGC*VFTGIWSCVWASTT
Trigger: AGTGGTAGAGGCCCAGACACAGCTCCAAATCCCGGTGAAGACTCAGCAGCCCAATGTTCCCATCCCTGCACCGCCCAGCAGCCAACTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332482.8
ENST00000333577.8
ENST00000389561.7
CDS TCA 90 bp GGGACGGGGGTGCTGCCACCACCGGAGGAATCACAAAGGCCACCCTaGGGAGCAGAAAGCATGTTTTGTCACCACCAGGAGCCACACACC +
Preference number: 5 (lower is better)
Translates to: GTGVLPPPEESQRPP*GAESMFCHHQEPHT
Trigger: GGTGTGTGGCTCCTGGTGGTGACAAAACATGCTTTCTGCTCCTCAGGGTGGCCTTTGTGATTCCTCCGGTGGTGGCAGCACCCCCGTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611841.1
CDS GCA 90 bp TCTATCTCCCGGGCCGTGGAGGCGGCTATCCGCCTCAGTCTGCTCTaGTCTTCCTTCTTCCCCCTTTCTTCACGGAGCTGCTTCTCCTCG +
Preference number: 5 (lower is better)
Translates to: SISRAVEAAIRLSLL*SSFFPLSSRSCFSS
Trigger: CGAGGAGAAGCAGCTCCGTGAAGAAAGGGGGAAGAAGGAAGAGCAGAGCAGACTGAGGCGGATAGCCGCCTCCACGGCCCGGGAGATAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332482.8
ENST00000333577.8
ENST00000389561.7
CDS GCA 90 bp CTTCTGCTCCTTGCCCTCTCTGCGAATTTTCAGAAGTCCTGGTGTTaGGCGGTCAAACAGGGACCGAGGAGGGACGACCGCCTCCCCGTG +
Preference number: 5 (lower is better)
Translates to: LLLLALSANFQKSWC*AVKQGPRRDDRLPV
Trigger: CACGGGGAGGCGGTCGTCCCTCCTCGGTCCCTGTTTGACCGCGCAACACCAGGACTTCTGAAAATTCGCAGAGAGGGCAAGGAGCAGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389561.7
ENST00000611841.1
CDS GCA 90 bp CGCCAGGCGCTTGTTGATGGACTGGAAGGTGGCAGCTGGGACCCCTaGGATGGTGTTCACGATCACATTTCCACTCACGGCACCAGTGGG +
Preference number: 5 (lower is better)
Translates to: RQALVDGLEGGSWDP*DGVHDHISTHGTSG
Trigger: CCCACTGGTGCCGTGAGTGGAAATGTGATCGTGAACACCATCGCAGGGGTCCCAGCTGCCACCTTCCAGTCCATCAACAAGCGCCTGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS GCA 90 bp TGGCTTCCCATCAGAGCCCGCCTTCTAGCTCTAGCCAGACAGCAGTaGCAACAGAACGTGGGGTCTGAGGGCCCACACCAGCCATCCGAA +
Preference number: 5 (lower is better)
Translates to: WLPIRARLLALARQQ*QQNVGSEGPHQPSE
Trigger: TTCGGATGGCTGGTGTGGGCCCTCAGACCCCACGTTCTGTTGGCACTGCTGTCTGGCTAGAGCTAGAAGGCGGGCTCTGATGGGAAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616136.1
CDS CCA 90 bp CACTGGCGACGCCAGGCGCTTGTTGATGGACTGGAAGGTGGCAGCTaGGACCCCTGCGATGGTGTTCACGATCACATTTCCACTCACGGC +
Preference number: 5 (lower is better)
Translates to: HWRRQALVDGLEGGS*DPCDGVHDHISTHG
Trigger: GCCGTGAGTGGAAATGTGATCGTGAACACCATCGCAGGGGTCCCAGCTGCCACCTTCCAGTCCATCAACAAGCGCCTGGCGTCGCCAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS CCA 90 bp CAGGAAACAGCAGGGCTCAACCCAGTCACATGGGGATGTGGGTGTTaGCACACGGGCAGGGGCCCAACGAGGCAGATCCTAACCAGTCCT +
Preference number: 5 (lower is better)
Translates to: QETAGLNPVTWGCGC*HTGRGPTRQILTSP
Trigger: AGGACTGGTTAGGATCTGCCTCGTTGGGCCCCTGCCCGTGTGCCAACACCCACATCCCCATGTGACTGGGTTGAGCCCTGCTGTTTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611841.1
CDS CCA 90 bp CAAGTCCCAGGAAACAGCAGGGCTCAACCCAGTCACATGGGGATGTaGGTGTTGGCACACGGGCAGGGGCCCAACGAGGCAGATCCTAAC +
Preference number: 5 (lower is better)
Translates to: QVPGNSRAQPSHMGM*VLAHGQGPNEADPN
Trigger: GTTAGGATCTGCCTCGTTGGGCCCCTGCCCGTGTGCCAACACCCACATCCCCATGTGACTGGGTTGAGCCCTGCTGTTTCCTGGGACTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611841.1
CDS CCA 90 bp GCGCCAAGGCACGTTTGTGCTAGAACACGTGATGGCACGCTCAAGTaGGTGGGTGTGAGGAAAGAACACGGGTCGCTGGCGACCACTGCC +
Preference number: 5 (lower is better)
Translates to: APRHVCARTRDGTLK*VGVRKEHGSLATTA
Trigger: GGCAGTGGTCGCCAGCGACCCGTGTTCTTTCCTCACACCCACCCACTTGAGCGTGCCATCACGTGTTCTAGCACAAACGTGCCTTGGCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611739.4
CDS TCA 90 bp GGTGGTTGCAGATGCGCTGCAGCCGCACAAGGATGCTCAGGACGTTaGCAAAGTGCCCGCTCTTCAAGGCCTCCTGAGTGCCAGGTTGCA +
Preference number: 5 (lower is better)
Translates to: GGCRCAAAAQGCSGR*QSARSSRPPECQVA
Trigger: TGCAACCTGGCACTCAGGAGGCCTTGAAGAGCGGGCACTTTGTCAACGTCCTGAGCATCCTTGTGCGGCTGCAGCGCATCTGCAACCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS TCA 90 bp GTGTCACCGGCGTCTCTGGCTGAGCCACGCGGCTCTGTGGTCCTGTaGTGGATGCCAGCTGAGCTATTTTCACTACCTCTCCACTGGGCA +
Preference number: 5 (lower is better)
Translates to: VSPASLAEPRGSVVL*WMPAELFSLPLHWA
Trigger: TGCCCAGTGGAGAGGTAGTGAAAATAGCTCAGCTGGCATCCATCACAGGACCACAGAGCCGCGTGGCTCAGCCAGAGACGCCGGTGACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS GCA 90 bp TTCACCGGGATTTGGAGCTGTGTCTGGGCCTCTACCACTTGCGGCTaGTGTGCAAACTGCAGCGCAGAGGAGAGGGCTGCAGTGGGAACA +
Preference number: 5 (lower is better)
Translates to: FTGIWSCVWASTTCG*CANCSAEERAAVGT
Trigger: TGTTCCCACTGCAGCCCTCTCCTCTGCGCTGCAGTTTGCACAGCAGCCGCAAGTGGTAGAGGCCCAGACACAGCTCCAAATCCCGGTGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332482.8
ENST00000333577.8
ENST00000389561.7
CDS GCA 90 bp CTGCTGCCTCTTAAACAGGTCCGTCTCTACTGTGCTTCCGGCCCCTaGTACCAGGCTCCCTGCGAGGGCTTGCTGAAATGGTTGCTGCTG +
Preference number: 5 (lower is better)
Translates to: LLPLKQVRLYCASGP*YQAPCEGLLKWLLL
Trigger: CAGCAGCAACCATTTCAGCAAGCCCTCGCAGGGAGCCTGGTAGCAGGGGCCGGAAGCACAGTAGAGACGGACCTGTTTAAGAGGCAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333577.8
CDS GCA 90 bp GGCCTCTTAGACTGCTCTGCCATACCTGTGGAGGGCATCGCCTGCTaGCTCTTAAACAGGTCCGTCTCTACTGTGCTTCCGGCCCCTGCT +
Preference number: 5 (lower is better)
Translates to: GLLDCSAIPVEGIAC*LLNRSVSTVLPAPA
Trigger: AGCAGGGGCCGGAAGCACAGTAGAGACGGACCTGTTTAAGAGGCAGCAGGCGATGCCCTCCACAGGTATGGCAGAGCAGTCTAAGAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333577.8
ENST00000389561.7
CDS GCA 90 bp CGAGGCCTCTTAGACTGCTCTGCCATACCTGTGGAGGGCATCGCCTaGTGCCTCTTAAACAGGTCCGTCTCTACTGTGCTTCCGGCCCCT +
Preference number: 5 (lower is better)
Translates to: RGLLDCSAIPVEGIA*CLLNRSVSTVLPAP
Trigger: AGGGGCCGGAAGCACAGTAGAGACGGACCTGTTTAAGAGGCAGCAGGCGATGCCCTCCACAGGTATGGCAGAGCAGTCTAAGAGGCCTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333577.8
ENST00000389561.7
CDS GCA 90 bp TGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGTTGTTGCTaGTGCTGCTGCTGCTGCCTGAGAAGCTGGAAATGTGCAGGTGTG +
Preference number: 5 (lower is better)
Translates to: CCCCCCCCCCCCCCC*CCCCCLRSWKCAGV
Trigger: CACACCTGCACATTTCCAGCTTCTCAGGCAGCAGCAGCAGCAGCAGCAACAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS GCA 90 bp TGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGTTGTTaGTGCTGCTGCTGCTGCTGCCTGAGAAGCTGGAAATGTGCAGGT +
Preference number: 5 (lower is better)
Translates to: CCCCCCCCCCCCCCC*CCCCCCLRSWKCAG
Trigger: ACCTGCACATTTCCAGCTTCTCAGGCAGCAGCAGCAGCAGCAGCAACAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS GCA 90 bp CCTCAGTGCTCACTCCCTCTCCCTCTGGGTTCCAAAGGACAGCTCTaGTTCCAGCTCCCCACAGAGCATGCCATTGCTGCACACCAGCAG +
Preference number: 5 (lower is better)
Translates to: PQCSLPLPLGSKGQL*FQLPTEHAIAAHQQ
Trigger: CTGCTGGTGTGCAGCAATGGCATGCTCTGTGGGGAGCTGGAAGCAGAGCTGTCCTTTGGAACCCAGAGGGAGAGGGAGTGAGCACTGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616136.1
CDS CCA 90 bp GCCCGGTTGCAGGGCTCCTATTCATCAGCTGCTGTATTTGATAACTaGGAGACTGGGGTGCCGACGGGCTTGCTGAGGGAGCGAAGGGAG +
Preference number: 5 (lower is better)
Translates to: ARLQGSYSSAAVFDN*ETGVPTGLLRERRE
Trigger: CTCCCTTCGCTCCCTCAGCAAGCCCGTCGGCACCCCAGTCTCCCAGTTATCAAATACAGCAGCTGATGAATAGGAGCCCTGCAACCGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332482.8
ENST00000333577.8
ENST00000389561.7
CDS CCA 90 bp TGGTCTTTTCCTCCTGGGTCGGCCCTCCAATGGGAGAAGCTGGTTTaGAGGCCGTTCCGGGTTCTCCTACAGCCAAGGCATTCACCGCCA +
Preference number: 5 (lower is better)
Translates to: WSFPPGSALQWEKLV*RPFRVLLQPRHSPP
Trigger: TGGCGGTGAATGCCTTGGCTGTAGGAGAACCCGGAACGGCCTCCAAACCAGCTTCTCCCATTGGAGGGCCGACCCAGGAGGAAAAGACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS CCA 90 bp TTGGCACACGGGCAGGGGCCCAACGAGGCAGATCCTAACCAGTCCTaGCCAATAACCACCACCTCGGGGACTAATTCAGACAGTCCAGGG +
Preference number: 5 (lower is better)
Translates to: LAHGQGPNEADPNQS*PITTTSGTNSDSPG
Trigger: CCCTGGACTGTCTGAATTAGTCCCCGAGGTGGTGGTTATTGGCCAGGACTGGTTAGGATCTGCCTCGTTGGGCCCCTGCCCGTGTGCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611841.1
CDS CCA 90 bp GCTCACAGCACAGCCAGTGTCCAGGTGGTGTGGCACAAAGAACCCTaGGCCTGCTGGAGTCAGCCAGCTGCCTTTTACTGGCCCTGTGAT +
Preference number: 5 (lower is better)
Translates to: AHSTASVQVVWHKEP*ACWSQPAAFYWPCD
Trigger: ATCACAGGGCCAGTAAAAGGCAGCTGGCTGACTCCAGCAGGCCCAGGGTTCTTTGTGCCACACCACCTGGACACTGGCTGTGCTGTGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616136.1
CDS TCA 90 bp ACGTTTGTGCTAGAACACGTGATGGCACGCTCAAGTGGGTGGGTGTaGGGAAAGAACACGGGTCGCTGGCGACCACTGCCACCAGAGAGG +
Preference number: 5 (lower is better)
Translates to: TFVLEHVMARSSGWV*GKNTGRWRPLPPER
Trigger: CCTCTCTGGTGGCAGTGGTCGCCAGCGACCCGTGTTCTTTCCTCACACCCACCCACTTGAGCGTGCCATCACGTGTTCTAGCACAAACGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611739.4
CDS GCA 90 bp CTGCTGCCTCTTAAACAGGTCCGTCTCTACTGTGCTTCCGGCCCCTaGTACCAGGCTCCCTGCGAGGGCTTGCTCGTCATTGATAACCTC +
Preference number: 5 (lower is better)
Translates to: LLPLKQVRLYCASGP*YQAPCEGLLVIDNL
Trigger: GAGGTTATCAATGACGAGCAAGCCCTCGCAGGGAGCCTGGTAGCAGGGGCCGGAAGCACAGTAGAGACGGACCTGTTTAAGAGGCAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332482.8
CDS GCA 90 bp CTGCTGCCTCTTAAACAGGTCCGTCTCTACTGTGCTTCCGGCCCCTaGTACCAGGCTCCCTGCGAGGGCTTGCTGCTCGTCATTGATAAC +
Preference number: 5 (lower is better)
Translates to: LLPLKQVRLYCASGP*YQAPCEGLLLVIDN
Trigger: GTTATCAATGACGAGCAGCAAGCCCTCGCAGGGAGCCTGGTAGCAGGGGCCGGAAGCACAGTAGAGACGGACCTGTTTAAGAGGCAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS GCA 90 bp GGGACCAGGAAGTGCACCATGGTCCAGAGCTCCAGGAAGGTATTGTaGAGCGGCGAGTCGATCAGAAGCAGACGTTGTTGGCTCTGCAGG +
Preference number: 5 (lower is better)
Translates to: GTRKCTMVQSSRKVL*SGESIRSRRCWLCR
Trigger: CCTGCAGAGCCAACAACGTCTGCTTCTGATCGACTCGCCGCTGCACAATACCTTCCTGGAGCTCTGGACCATGGTGCACTTCCTGGTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS GCA 90 bp CCGGGCCTCCCTCTCCTGCAGGGTCTTCAGGTTCCAGAACTCCCATaGCCTCACTGCAGTCATCACTGCGTCCTCACTGTTTCTCTCCTT +
Preference number: 5 (lower is better)
Translates to: PGLPLLQGLQVPELP*PHCSHHCVLTVSLL
Trigger: AAGGAGAGAAACAGTGAGGACGCAGTGATGACTGCAGTGAGGGCATGGGAGTTCTGGAACCTGAAGACCCTGCAGGAGAGGGAGGCCCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389561.7
ENST00000611841.1
CDS GCA 90 bp TGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGTTGTTGCTGCTaGTGCTGCTGCTGCCTGAGAAGCTGGAAATGTGCAGGTGTGATG +
Preference number: 5 (lower is better)
Translates to: CCCCCCCCCCCCCCC*CCCCLRSWKCAGVM
Trigger: CATCACACCTGCACATTTCCAGCTTCTCAGGCAGCAGCAGCAGCAGCAGCAACAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS GCA 90 bp AGTTTCCTCAAGACAACATCCTCCGTCTTGAGGATAAGCACCAGGTaGCTGCAGGGGTCCAGCACAGCGCTCAGGGAACAGGGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: SFLKTTSSVLRISTR*LQGSSTALREQGSS
Trigger: GGAGCTGCCCTGTTCCCTGAGCGCTGTGCTGGACCCCTGCAGGCACCTGGTGCTTATCCTCAAGACGGAGGATGTTGTCTTGAGGAAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616136.1
CDS CCA 90 bp GAACTGCAGTGTCACCGGCGTCTCTGGCTGAGCCACGCGGCTCTGTaGTCCTGTGATGGATGCCAGCTGAGCTATTTTCACTACCTCTCC +
Preference number: 5 (lower is better)
Translates to: ELQCHRRLWLSHAAL*SCDGCQLSYFHYLS
Trigger: GGAGAGGTAGTGAAAATAGCTCAGCTGGCATCCATCACAGGACCACAGAGCCGCGTGGCTCAGCCAGAGACGCCGGTGACACTGCAGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS CCA 90 bp GAGTCTGGTCTTTTCCTCCTGGGTCGGCCCTCCAATGGGAGAAGCTaGTTTGGAGGCCGTTCCGGGTTCTCCTACAGCCAAGGCATTCAC +
Preference number: 5 (lower is better)
Translates to: ESGLFLLGRPSNGRS*FGGRSGFSYSQGIH
Trigger: GTGAATGCCTTGGCTGTAGGAGAACCCGGAACGGCCTCCAAACCAGCTTCTCCCATTGGAGGGCCGACCCAGGAGGAAAAGACCAGACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS CCA 90 bp ACCAGGAGCCACACACCTTCACCCAGCATGGGGGCTCCTGAAAGATaGGGCAGACTTCTGACAGTCCAAGTCCCAGGAAACAGCAGGGCT +
Preference number: 5 (lower is better)
Translates to: TRSHTPSPSMGAPER*GRLLTVQVPGNSRA
Trigger: AGCCCTGCTGTTTCCTGGGACTTGGACTGTCAGAAGTCTGCCCCATCTTTCAGGAGCCCCCATGCTGGGTGAAGGTGTGTGGCTCCTGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611841.1
CDS-3UTR CAA 90 bp ACGCCTTCCACAACAGCACAGGTGGTTCTCTGCTTCACTGGCAGAACCACACAACTTGCACTTGGGCTGTaGGCTGCGGGGGCGCAGACT +
Preference number: 5 (lower is better)
Translates to: TPSTTAQVVLCFTGRTTQLALGL*AAGAQT
Trigger: AGTCTGCGCCCCCGCAGCCAACAGCCCAAGTGCAAG...TTGTGTGGTTCTGCCAGTGAAGCAGAGAACCACCTGTGCTGTTGTGGAAGGCGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CAA 90 bp TCCATTGTATGCTCCTCACACACGGCAGACGGCTTCTGTGGCGTGCAAAGCACTGGAAGCAGAGGCAACTaGCTGGATGCTGGCCACGGG +
Preference number: 5 (lower is better)
Translates to: SIVCSSHTADGFCGVQSTGSRGN*LDAGHG
Trigger: CCCGTGGCCAGCATCCAGCAAGTTGCCTCTGCTTCC...AGTGCTTTGCACGCCACAGAAGCCGTCTGCCGTGTGTGAGGAGCATACAATGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CAA 90 bp TATGCTCCTCACACACGGCAGACGGCTTCTGTGGCGTGCAAAGCACTACATGCTTGCTGGCCTTCAGCTTaGCTGCTGCTGGTCGGGCTG +
Preference number: 5 (lower is better)
Translates to: YAPHTRQTASVACKALHACWPSA*LLLVGL
Trigger: CAGCCCGACCAGCAGCAGCAAAGCTGAAGGCCAGCA...AGCATGTAGTGCTTTGCACGCCACAGAAGCCGTCTGCCGTGTGTGAGGAGCATA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CAA 90 bp TCCATTGTATGCTCCTCACACACGGCAGACGGCTTCTGTGGCGTGCAAAGCACTTGCACTGGGGTCAGGTaGGTAGTGACCACGGCCGAG +
Preference number: 5 (lower is better)
Translates to: SIVCSSHTADGFCGVQSTCTGVR*VVTTAE
Trigger: CTCGGCCGTGGTCACTACCAACCTGACCCCAGTGCA...AGTGCTTTGCACGCCACAGAAGCCGTCTGCCGTGTGTGAGGAGCATACAATGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS TCA 90 bp TCTGCAGCTGATGCTGGACGTTCTGGGGGCCAGTGCCATGGTGCATaGTCACCTCCCTTCTGTATCCAATGTGTCGTTCTCCCTGGGCCT +
Preference number: 5 (lower is better)
Translates to: SAADAGRSGGQCHGA*SPPFCIQCVVLPGP
Trigger: AGGCCCAGGGAGAACGACACATTGGATACAGAAGGGAGGTGATCATGCACCATGGCACTGGCCCCCAGAACGTCCAGCATCAGCTGCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332482.8
ENST00000333577.8
ENST00000389561.7
CDS TCA 90 bp CACCTTCACCCAGCATGGGGGCTCCTGAAAGATGGGGCAGACTTCTaGCAGTCCAAGTCCCAGGAAACAGCAGGGCTCAACCCAGTCACA +
Preference number: 5 (lower is better)
Translates to: HLHPAWGLLKDGADF*QSKSQETAGLNPVT
Trigger: TGTGACTGGGTTGAGCCCTGCTGTTTCCTGGGACTTGGACTGTCAGAAGTCTGCCCCATCTTTCAGGAGCCCCCATGCTGGGTGAAGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611841.1
CDS TCA 90 bp TGTCACCACCAGGAGCCACACACCTTCACCCAGCATGGGGGCTCCTaGAAGATGGGGCAGACTTCTGACAGTCCAAGTCCCAGGAAACAG +
Preference number: 5 (lower is better)
Translates to: CHHQEPHTFTQHGGS*KMGQTSDSPSPRKQ
Trigger: CTGTTTCCTGGGACTTGGACTGTCAGAAGTCTGCCCCATCTTTCAGGAGCCCCCATGCTGGGTGAAGGTGTGTGGCTCCTGGTGGTGACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611841.1
CDS TCA 90 bp CATGGCCCTGGCACACTCATCACATCTGTCAGCGTCTTTCCCCACTaGGGGCCAGCAAGGACAATCCCTGTAACACAGAGACAGGGCAGG +
Preference number: 5 (lower is better)
Translates to: HGPGTLITSVSVFPH*GPARTIPVTQRQGR
Trigger: CCTGCCCTGTCTCTGTGTTACAGGGATTGTCCTTGCTGGCCCTCAGTGGGGAAAGACGCTGACAGATGTGATGAGTGTGCCAGGGCCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611841.1
CDS GCA 90 bp GTGAAAACCGCTTCCCAGTGCCTCTCGGTCATGCCCTTCACGCGCTaGATCTCATCAATGACCAGGCACTTCCAGCGCACTCGTGTGAAG +
Preference number: 5 (lower is better)
Translates to: VKTASQCLSVMPFTR*ISSMTRHFQRTRVK
Trigger: CTTCACACGAGTGCGCTGGAAGTGCCTGGTCATTGATGAGATGCAGCGCGTGAAGGGCATGACCGAGAGGCACTGGGAAGCGGTTTTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS GCA 90 bp TGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGTTGTTGCTGCTGCTaGTGCTGCTGCCTGAGAAGCTGGAAATGTGCAGGTGTGATGGTT +
Preference number: 5 (lower is better)
Translates to: CCCCCCCCCCCCCCC*CCCLRSWKCAGVMV
Trigger: AACCATCACACCTGCACATTTCCAGCTTCTCAGGCAGCAGCAGCAGCAGCAGCAACAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS GCA 90 bp AGCCCACGGCAGGAAAAGCACCTCTCTCCTGCAGGTTCTGCGCACTaGCACGTCCAGCTGATGCCTGAACACGCTAAGTGCACAACGATT +
Preference number: 5 (lower is better)
Translates to: SPRQEKHLSPAGSAH*HVQLMPEHAKCTTI
Trigger: AATCGTTGTGCACTTAGCGTGTTCAGGCATCAGCTGGACGTGGCAGTGCGCAGAACCTGCAGGAGAGAGGTGCTTTTCCTGCCGTGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611841.1
CDS GCA 90 bp CCCGCGCTTCTGAAGCTCCCGCAAGACCTGCAGGCTCATCACACATaGTGCTGCGTTCAGATGTCAGTGATCTCACGGGACATCACCTTC +
Preference number: 5 (lower is better)
Translates to: PALLKLPQDLQAHHT*CCVQMSVISRDITF
Trigger: GAAGGTGATGTCCCGTGAGATCACTGACATCTGAACGCAGCAGCATGTGTGATGAGCCTGCAGGTCTTGCGGGAGCTTCAGAAGCGCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611739.4
CDS-3UTR CAA 90 bp TCTGGCAGACACTGTGGAAGCCCACGCCTTATCTTTAGAAAGTCCATTGTATGCGGGGTGCCGACGGGCTaGCTGAGGGAGCGAAGGGAG +
Preference number: 5 (lower is better)
Translates to: SGRHCGSPRLIFRKSIVCGVPTG*LRERRE
Trigger: CTCCCTTCGCTCCCTCAGCAAGCCCGTCGGCACCCC...GCATACAATGGACTTTCTAAAGATAAGGCGTGGGCTTCCACAGTGTCTGCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CAA 90 bp ACGCCTTCCACAACAGCACAGGTGGTTCTCTGCTTCACTGGCAGAACCACACAAGATCTGGGTCTGCACTaGCTGGGCCCCGGCCAGTTT +
Preference number: 5 (lower is better)
Translates to: TPSTTAQVVLCFTGRTTQDLGLH*LGPGQF
Trigger: AAACTGGCCGGGGCCCAGCAAGTGCAGACCCAGATC...TTGTGTGGTTCTGCCAGTGAAGCAGAGAACCACCTGTGCTGTTGTGGAAGGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CAA 90 bp AACCCATCTCGGATGATTGACTTTAGACAGGCCTTCCCCTCTGCGAAGACCACGGATCTGGGTCTGCACTaGCTGGGCCCCGGCCAGTTT +
Preference number: 5 (lower is better)
Translates to: NPSRMIDFRQAFPSAKTTDLGLH*LGPGQF
Trigger: AAACTGGCCGGGGCCCAGCAAGTGCAGACCCAGATC...CGTGGTCTTCGCAGAGGGGAAGGCCTGTCTAAAGTCAATCATCCGAGATGGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CAA 90 bp TGTGACATCTGTACTACCATTGCCTCTGCGTGGTCCTCTGGGCCTCACGCCAGCTGGGGGAGGCCACTGTaGGCTGCTCTTTGGAATAAC +
Preference number: 5 (lower is better)
Translates to: CDICTTIASAWSSGPHASWGRPL*AALWNN
Trigger: GTTATTCCAAAGAGCAGCCAACAGTGGCCTCCCCCA...GCTGGCGTGAGGCCCAGAGGACCACGCAGAGGCAATGGTAGTACAGATGTCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CAA 90 bp TGTGACATCTGTACTACCATTGCCTCTGCGTGGTCCTCTGGGCCTCACGCCAGCATGAGAACCAAGTCCTaGCGACTCTCCCTGTCGCCT +
Preference number: 5 (lower is better)
Translates to: CDICTTIASAWSSGPHASMRTKS*RLSLSP
Trigger: AGGCGACAGGGAGAGTCGCAAGGACTTGGTTCTCAT...GCTGGCGTGAGGCCCAGAGGACCACGCAGAGGCAATGGTAGTACAGATGTCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CAA 90 bp CCTCATCGTACCCTCAGCTGTGACATCTGTACTACCATTGCCTCTGCGTGGTCCGGTCTGCATCTGCCCTaGCGCCTGCAGCTGAGAAGT +
Preference number: 5 (lower is better)
Translates to: PHRTLSCDICTTIASAWSGLHLP*RLQLRS
Trigger: ACTTCTCAGCTGCAGGCGCAAGGGCAGATGCAGACC...GGACCACGCAGAGGCAATGGTAGTACAGATGTCACAGCTGAGGGTACGATGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS TCA 90 bp ACTGCTATAGCCACTGTGCCACCAGGACGGGGGCCAGACTCAGGGTaGAGGAGCCTTCAGGACAATGACAATAGAGCGAAGATCGCACAG +
Preference number: 5 (lower is better)
Translates to: TAIATVPPGRGPDSG*RSLQDNDNRAKIAQ
Trigger: CTGTGCGATCTTCGCTCTATTGTCATTGTCCTGAAGGCTCCTTCACCCTGAGTCTGGCCCCCGTCCTGGTGGCACAGTGGCTATAGCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611841.1
CDS GCA 90 bp CGCACAGCCAACCTAAGGCCCACCTTGCAACCTGTGGAGGTCACCTaGACCAGAAGGCCCTTGCTATGGACATCAACTATGACTCACTCC +
Preference number: 5 (lower is better)
Translates to: RTANLRPTLQPVEVT*TRRPLLWTSTMTHS
Trigger: GGAGTGAGTCATAGTTGATGTCCATAGCAAGGGCCTTCTGGTGCAGGTGACCTCCACAGGTTGCAAGGTGGGCCTTAGGTTGGCTGTGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611841.1
CDS GCA 90 bp TCAAGCCCTGAGAAGCTTGGTGATGCCTGGATGGGCTCTGGGAGCTaGTGCTGTGTTAATGTTCCACGAGTGGTGAGTCCCGTCCTCTGT +
Preference number: 5 (lower is better)
Translates to: SSPEKLGDAWMGSGS*CCVNVPRVVSPVLC
Trigger: ACAGAGGACGGGACTCACCACTCGTGGAACATTAACACAGCAGCAGCTCCCAGAGCCCATCCAGGCATCACCAAGCTTCTCAGGGCTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611739.4
CDS GCA 90 bp TTGCGCCTGATGCTAGTCCCTTCTGAAATCTCCAAATGCTCTCCCTaGCTACAGCGGTCACCTGAGAGCAGCTTCAGAGACCGCCACCTG +
Preference number: 5 (lower is better)
Translates to: LRLMLVPSEISKCSP*LQRSPESSFRDRHL
Trigger: CAGGTGGCGGTCTCTGAAGCTGCTCTCAGGTGACCGCTGTAGGCAGGGAGAGCATTTGGAGATTTCAGAAGGGACTAGCATCAGGCGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611739.4
CDS-3UTR CAA 90 bp CTGATCATTTCCCTTGAACACAGGCCAGGAACGTGCCTTGTGTGTTTAGGTGGGGCAGGACTCTGTGGTTaGGTGGGGGCAGATGCCACC +
Preference number: 5 (lower is better)
Translates to: LIISLEHRPGTCLVCLGGAGLCG*VGADAT
Trigger: GGTGGCATCTGCCCCCACCAAACCACAGAGTCCTGC...CCCACCTAAACACACAAGGCACGTTCCTGGCCTGTGTTCAAGGGAAATGATCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CAA 90 bp AGAGGAAGCCATGTTGTCACTTTTTCCATGAGCCACGTAGTACAGAGAACGCGGCTTGCACTTGGGCTGTaGGCTGCGGGGGCGCAGACT +
Preference number: 5 (lower is better)
Translates to: RGSHVVTFSMSHVVQRTRLALGL*AAGAQT
Trigger: AGTCTGCGCCCCCGCAGCCAACAGCCCAAGTGCAAG...CCGCGTTCTCTGTACTACGTGGCTCATGGAAAAAGTGACAACATGGCTTCCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CAA 90 bp TCCATTGTATGCTCCTCACACACGGCAGACGGCTTCTGTGGCGTGCAAAGCACTAGCTCCAGGAAGGTATaGTGCAGCGGCGAGTCGATC +
Preference number: 5 (lower is better)
Translates to: SIVCSSHTADGFCGVQSTSSRKV*CSGESI
Trigger: GATCGACTCGCCGCTGCACAATACCTTCCTGGAGCT...AGTGCTTTGCACGCCACAGAAGCCGTCTGCCGTGTGTGAGGAGCATACAATGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CAA 90 bp CCTCATCGTACCCTCAGCTGTGACATCTGTACTACCATTGCCTCTGCGTGGTCCATGGGAGAAGCTGGTTaGGAGGCCGTTCCGGGTTCT +
Preference number: 5 (lower is better)
Translates to: PHRTLSCDICTTIASAWSMGEAG*EAVPGS
Trigger: AGAACCCGGAACGGCCTCCAAACCAGCTTCTCCCAT...GGACCACGCAGAGGCAATGGTAGTACAGATGTCACAGCTGAGGGTACGATGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CAA 90 bp AACCCATCTCGGATGATTGACTTTAGACAGGCCTTCCCCTCTGCGAAGACCACGAAAGTTGGCAGGGGCTaGGCGAATGGCACCTGCTGC +
Preference number: 5 (lower is better)
Translates to: NPSRMIDFRQAFPSAKTTKVGRG*ANGTCC
Trigger: GCAGCAGGTGCCATTCGCCAAGCCCCTGCCAACTTT...CGTGGTCTTCGCAGAGGGGAAGGCCTGTCTAAAGTCAATCATCCGAGATGGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CAA 90 bp TCCCAGGGTCGCCAATTAGAGTCTGACAGTGTTCGGGCTGCTGCCTTTATAGTCGGCTCAGCTGTGGGTTaGGCAAAAGTTGGCAGGGGC +
Preference number: 5 (lower is better)
Translates to: SQGRQLESDSVRAAAFIVGSAVG*AKVGRG
Trigger: GCCCCTGCCAACTTTTGCCAAACCCACAGCTGAGCC...GACTATAAAGGCAGCAGCCCGAACACTGTCAGACTCTAATTGGCGACCCTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CAA 90 bp ACGCCTTCCACAACAGCACAGGTGGTTCTCTGCTTCACTGGCAGAACCACACAAGACGCCAGGCGCTTGTaGATGGACTGGAAGGTGGCA +
Preference number: 5 (lower is better)
Translates to: TPSTTAQVVLCFTGRTTQDARRL*MDWKVA
Trigger: TGCCACCTTCCAGTCCATCAACAAGCGCCTGGCGTC...TTGTGTGGTTCTGCCAGTGAAGCAGAGAACCACCTGTGCTGTTGTGGAAGGCGT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS TCA 90 bp GCCCACTTTCTGTGCACTTGCTACTGCATGCATCTCCCGCTGTCTTaGCGTAGTAAGAGGCTCTGGGCCACCTGTGTGTCCTATCAGCAC +
Preference number: 5 (lower is better)
Translates to: AHFLCTCYCMHLPLS*RSKRLWATCVSYQH
Trigger: GTGCTGATAGGACACACAGGTGGCCCAGAGCCTCTTACTACGTCAAGACAGCGGGAGATGCATGCAGTAGCAAGTGCACAGAAAGTGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611118.1
CDS GCA 90 bp GCGCTTCTGAAGCTCCCGCAAGACCTGCAGGCTCATCACACATGCTaGTGCGTTCAGATGTCAGTGATCTCACGGGACATCACCTTCACT +
Preference number: 5 (lower is better)
Translates to: ALLKLPQDLQAHHTC*CVQMSVISRDITFT
Trigger: AGTGAAGGTGATGTCCCGTGAGATCACTGACATCTGAACGCAGCAGCATGTGTGATGAGCCTGCAGGTCTTGCGGGAGCTTCAGAAGCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611739.4
CDS CCA 90 bp CAACCTGTTCAATATTCGACCAAAAGCACTCTATCTCCCGGGCCGTaGAGGCGGCTATCCGCCTCAGTCTGCTCTGCTCTTCCTTCTTCC +
Preference number: 5 (lower is better)
Translates to: QPVQYSTKSTLSPGP*RRLSASVCSALPSS
Trigger: GGAAGAAGGAAGAGCAGAGCAGACTGAGGCGGATAGCCGCCTCCACGGCCCGGGAGATAGAGTGCTTTTGGTCGAATATTGAACAGGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332482.8
ENST00000333577.8
ENST00000389561.7
CDS CCA 90 bp GGTAGTTTTGCTTTAGATGAGAGGCAGCCCTGCTGCCCTGACTACTaGCACGGAGGCTTAGTAGGTGTCTTTAGCCTGACAGCAGGGACC +
Preference number: 5 (lower is better)
Translates to: GSFALDERQPCCPDY*HGGLVGVFSLTAGT
Trigger: GGTCCCTGCTGTCAGGCTAAAGACACCTACTAAGCCTCCGTGCCAGTAGTCAGGGCAGCAGGGCTGCCTCTCATCTAAAGCAAAACTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330386.7
ENST00000389561.7
ENST00000611118.1
ENST00000611739.4
ENST00000616136.1
CDS-3UTR CAA 90 bp TCCATTGTATGCTCCTCACACACGGCAGACGGCTTCTGTGGCGTGCAAAGCACTTCACGTTCTGCCCGGTaGCAGGGCTCCTATTCATCA +
Preference number: 5 (lower is better)
Translates to: SIVCSSHTADGFCGVQSTSRSAR*QGSYSS
Trigger: TGATGAATAGGAGCCCTGCAACCGGGCAGAACGTGA...AGTGCTTTGCACGCCACAGAAGCCGTCTGCCGTGTGTGAGGAGCATACAATGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CAA 90 bp CAGCACAGGTGGTTCTCTGCTTCACTGGCAGAACCACACAAGCTTATCCTAGAGCTGGGCCTCTACCACTaGCGGCTGCTGTGCAAACTG +
Preference number: 5 (lower is better)
Translates to: QHRWFSASLAEPHKLILELGLYH*RLLCKL
Trigger: CAGTTTGCACAGCAGCCGCAAGTGGTAGAGGCCCAG...CTCTAGGATAAGCTTGTGTGGTTCTGCCAGTGAAGCAGAGAACCACCTGTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CAA 90 bp TCCATTGTATGCTCCTCACACACGGCAGACGGCTTCTGTGGCGTGCAAAGCACTCTGGAAAACTACCCCTaGGTGACCCACTTCAAGGCG +
Preference number: 5 (lower is better)
Translates to: SIVCSSHTADGFCGVQSTLENYP*VTHFKA
Trigger: CGCCTTGAAGTGGGTCACCAAGGGGTAGTTTTCCAG...AGTGCTTTGCACGCCACAGAAGCCGTCTGCCGTGTGTGAGGAGCATACAATGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CAA 90 bp TCTCCACATTTCTTATCAAGAGCTCAAGTGAGCTCCCCAGTTGATTTCACTGACGGTCTGCATCTGCCCTaGCGCCTGCAGGAGCCGGGC +
Preference number: 5 (lower is better)
Translates to: SPHFLSRAQVSSPVDFTDGLHLP*RLQEPG
Trigger: GCCCGGCTCCTGCAGGCGCAAGGGCAGATGCAGACC...GTCAGTGAAATCAACTGGGGAGCTCACTTGAGCTCTTGATAAGAAATGTGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330386.7
CDS-3UTR CAA 90 bp TCCCAGGGTCGCCAATTAGAGTCTGACAGTGTTCGGGCTGCTGCCTTTATAGTCGCTTTTGCCTCCGGATaGGCAGAGAACGTGGCGATG +
Preference number: 5 (lower is better)
Translates to: SQGRQLESDSVRAAAFIVAFASG*AENVAM
Trigger: CATCGCCACGTTCTCTGCCAATCCGGAGGCAAAAGC...GACTATAAAGGCAGCAGCCCGAACACTGTCAGACTCTAATTGGCGACCCTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CAA 90 bp CGTGACATGGTCCCAAGGTTCACTAATAAAGCGTTTTCTGTGAGGAAGGTAGTTCTGGAGGACGCTGCCTaGCAGCTGCAGCGGCTGGCC +
Preference number: 5 (lower is better)
Translates to: RDMVPRFTNKAFSVRKVVLEDAA*QLQRLA
Trigger: GGCCAGCCGCTGCAGCTGCAAGGCAGCGTCCTCCAG...AACTACCTTCCTCACAGAAAACGCTTTATTAGTGAACCTTGGGACCATGTCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS GCA 90 bp AACACTTTCCACCCAGTGCCCACTTTCTGTGCACTTGCTACTGCATaGATCTCCCGCTGTCTTGACGTAGTAAGAGGCTCTGGGCCACCT +
Preference number: 5 (lower is better)
Translates to: NTFHPVPTFCALATA*ISRCLDVVRGSGPP
Trigger: AGGTGGCCCAGAGCCTCTTACTACGTCAAGACAGCGGGAGATGCATGCAGTAGCAAGTGCACAGAAAGTGGGCACTGGGTGGAAAGTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611118.1
CDS GCA 90 bp AGACAGCACTTGCGCCTGATGCTAGTCCCTTCTGAAATCTCCAAATaGTCTCCCTGCCTACAGCGGTCACCTGAGAGCAGCTTCAGAGAC +
Preference number: 5 (lower is better)
Translates to: RQHLRLMLVPSEISK*SPCLQRSPESSFRD
Trigger: GTCTCTGAAGCTGCTCTCAGGTGACCGCTGTAGGCAGGGAGAGCATTTGGAGATTTCAGAAGGGACTAGCATCAGGCGCAAGTGCTGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611739.4
CDS GCA 90 bp CTTCTGAAGCTCCCGCAAGACCTGCAGGCTCATCACACATGCTGCTaGGTTCAGATGTCAGTGATCTCACGGGACATCACCTTCACTTCC +
Preference number: 5 (lower is better)
Translates to: LLKLPQDLQAHHTCC*VQMSVISRDITFTS
Trigger: GGAAGTGAAGGTGATGTCCCGTGAGATCACTGACATCTGAACGCAGCAGCATGTGTGATGAGCCTGCAGGTCTTGCGGGAGCTTCAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611739.4
CDS CCA 90 bp GGTTGCTGCTGGGATGAAAAAGCAGCAGAAACCTTTGGCGGAAGCTaGGTTGCTATAGCAACGGGAGTCCCAGTCTGCCCATCCTTTCCT +
Preference number: 5 (lower is better)
Translates to: GCCWDEKAAETFGGS*VAIATGVPVCPSFP
Trigger: AGGAAAGGATGGGCAGACTGGGACTCCCGTTGCTATAGCAACCCAGCTTCCGCCAAAGGTTTCTGCTGCTTTTTCATCCCAGCAGCAACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333577.8
CDS CCA 90 bp GATGGCTTCAGCCACCGCAGTGACGTCCGCAATGTCCTTGGCGTTTaGCTTCCCGATATTCATCCTCTCGGCAGCTTTGAACTGATCCAT +
Preference number: 5 (lower is better)
Translates to: DGFSHRSDVRNVLGV*LPDIHPLGSFELIH
Trigger: ATGGATCAGTTCAAAGCTGCCGAGAGGATGAATATCGGGAAGCCAAACGCCAAGGACATTGCGGACGTCACTGCGGTGGCTGAAGCCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS CCA 90 bp GCCCTGATTTCAAGGGCCCTCCCTGCACAAGGCCCTCACGGACCCTaGTCTCTTGCTGGGTCCTGTTACTTACAGAAAACGGATGAAAAT +
Preference number: 5 (lower is better)
Translates to: ALISRALPAQGPHGP*SLAGSCYLQKTDEN
Trigger: ATTTTCATCCGTTTTCTGTAAGTAACAGGACCCAGCAAGAGACCAGGGTCCGTGAGGGCCTTGTGCAGGGAGGGCCCTTGAAATCAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611118.1
CDS-3UTR CAA 90 bp GCTGTCGTAAGTCCACAAGGAAGAGTTGACTGGGCCCACCGCTATAGCCAATACTGTTCCGGCGTCAGCTaGCCCACAGCTTTGATCTGT +
Preference number: 5 (lower is better)
Translates to: AVVSPQGRVDWAHRYSQYCSGVS*PTALIC
Trigger: ACAGATCAAAGCTGTGGGCAAGCTGACGCCGGAACA...GTATTGGCTATAGCGGTGGGCCCAGTCAACTCTTCCTTGTGGACTTACGACAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CAA 90 bp AGGTGGTTCTCTGCTTCACTGGCAGAACCACACAAGCTTATCCTAGAGAAAATCGGTCTGCACTTGCACTaGGGCTGTTGGCTGCGGGGG +
Preference number: 5 (lower is better)
Translates to: RWFSASLAEPHKLILEKIGLHLH*GCWLRG
Trigger: CCCCCGCAGCCAACAGCCCAAGTGCAAGTGCAGACC...GATTTTCTCTAGGATAAGCTTGTGTGGTTCTGCCAGTGAAGCAGAGAACCACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CAA 90 bp CAAGCCACAGCACAAAGGATACTATTGGATATGGACCTTTTTGCTTTGGTGAAACGGGCCACCTGGAGGTaGGCCACGGTGGTGCCCGTC +
Preference number: 5 (lower is better)
Translates to: QATAQRILLDMDLFALVKRATWR*ATVVPV
Trigger: GACGGGCACCACCGTGGCCAACCTCCAGGTGGCCCG...TTTCACCAAAGCAAAAAGGTCCATATCCAATAGTATCCTTTGTGCTGTGGCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CAA 90 bp TGTGACATCTGTACTACCATTGCCTCTGCGTGGTCCTCTGGGCCTCACGCCAGCCAACTTGAGGAAGTTTaGCAACCTGGATCTGGGTCT +
Preference number: 5 (lower is better)
Translates to: CDICTTIASAWSSGPHASQLEEV*QPGSGS
Trigger: AGACCCAGATCCAGGTTGCAAAACTTCCTCAAGTTG...GCTGGCGTGAGGCCCAGAGGACCACGCAGAGGCAATGGTAGTACAGATGTCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CAA 90 bp ACGCCTTCCACAACAGCACAGGTGGTTCTCTGCTTCACTGGCAGAACCACACAAGCTGGCCACGGGTGTTaGCTGTTGAACAACTTGAGG +
Preference number: 5 (lower is better)
Translates to: TPSTTAQVVLCFTGRTTQAGHGC*LLNNLR
Trigger: CCTCAAGTTGTTCAACAGCAAACACCCGTGGCCAGC...TTGTGTGGTTCTGCCAGTGAAGCAGAGAACCACCTGTGCTGTTGTGGAAGGCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CAA 90 bp CGTGACATGGTCCCAAGGTTCACTAATAAAGCGTTTTCTGTGAGGAAGGTAGTTACTTGGGCTGCTGGCTaGGGCTGTCGGAGCTGGCGG +
Preference number: 5 (lower is better)
Translates to: RDMVPRFTNKAFSVRKVVTWAAG*GCRSWR
Trigger: CCGCCAGCTCCGACAGCCCAAGCCAGCAGCCCAAGT...AACTACCTTCCTCACAGAAAACGCTTTATTAGTGAACCTTGGGACCATGTCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CAA 90 bp CCTCATCGTACCCTCAGCTGTGACATCTGTACTACCATTGCCTCTGCGTGGTCCGATCAGAAGCAGACGTaGTTGGCTCTGCAGGGTGAA +
Preference number: 5 (lower is better)
Translates to: PHRTLSCDICTTIASAWSDQKQT*LALQGE
Trigger: TTCACCCTGCAGAGCCAACAACGTCTGCTTCTGATC...GGACCACGCAGAGGCAATGGTAGTACAGATGTCACAGCTGAGGGTACGATGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CAA 90 bp AGAGGAAGCCATGTTGTCACTTTTTCCATGAGCCACGTAGTACAGAGAACGCGGGGGCTGCTGCTGCTTTaGCCTCCGGATTGGCAGAGA +
Preference number: 5 (lower is better)
Translates to: RGSHVVTFSMSHVVQRTRGLLLL*PPDWQR
Trigger: TCTCTGCCAATCCGGAGGCAAAAGCAGCAGCAGCCC...CCGCGTTCTCTGTACTACGTGGCTCATGGAAAAAGTGACAACATGGCTTCCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CAA 90 bp TCCCAGGGTCGCCAATTAGAGTCTGACAGTGTTCGGGCTGCTGCCTTTATAGTCTGTGACAGGGTGAACTaGCTGCCCTGGAACTGCAGT +
Preference number: 5 (lower is better)
Translates to: SQGRQLESDSVRAAAFIVCDRVN*LPWNCS
Trigger: ACTGCAGTTCCAGGGCAGCAAGTTCACCCTGTCACA...GACTATAAAGGCAGCAGCCCGAACACTGTCAGACTCTAATTGGCGACCCTGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS TCA 90 bp AAAAGCACCTCTCTCCTGCAGGTTCTGCGCACTGCCACGTCCAGCTaGTGCCTGAACACGCTAAGTGCACAACGATTTGCTGAACTCACT +
Preference number: 5 (lower is better)
Translates to: KSTSLLQVLRTATSS*CLNTLSAQRFAELT
Trigger: AGTGAGTTCAGCAAATCGTTGTGCACTTAGCGTGTTCAGGCATCAGCTGGACGTGGCAGTGCGCAGAACCTGCAGGAGAGAGGTGCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611841.1
CDS GCA 90 bp AGCCAGAGCCTTTTTCTCTTTTGCGATTCGCTCTGCACGGAGAGATaGCACCTGGATGGGAGGCAGCGGCTTGTCATAGTTGATTCCACT +
Preference number: 5 (lower is better)
Translates to: SQSLFLFCDSLCTER*HLDGRQRLVIVDST
Trigger: AGTGGAATCAACTATGACAAGCCGCTGCCTCCCATCCAGGTGGCATCTCTCCGTGCAGAGCGAATCGCAAAAGAGAAAAAGGCTCTGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS CCA 90 bp CTTGACCAGGCTCAGCTGTGGGTTTGGCAAAAGTTGGCAGGGGCTTaGCGAATGGCACCTGCTGCTTCAGCAGAATATTCTTCTTCTGCT +
Preference number: 5 (lower is better)
Translates to: LDQAQLWVWQKLAGA*RMAPAASAEYSSSA
Trigger: AGCAGAAGAAGAATATTCTGCTGAAGCAGCAGGTGCCATTCGCCAAGCCCCTGCCAACTTTTGCCAAACCCACAGCTGAGCCTGGTCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389561.7
ENST00000611841.1
CDS-3UTR CAA 90 bp CTATGTCAAATACCAGCTTCCCCCGAAAACTGGAGATGCGTCTTGAGTGCACTGGGTCCACAGGGAGCCTaGTCGATGCTACCATCTGTG +
Preference number: 5 (lower is better)
Translates to: LCQIPASPENWRCVLSALGPQGA*SMLPSV
Trigger: CACAGATGGTAGCATCGACAAGGCTCCCTGTGGACC...CAGTGCACTCAAGACGCATCTCCAGTTTTCGGGGGAAGCTGGTATTTGACATAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CAA 90 bp TATGCTCCTCACACACGGCAGACGGCTTCTGTGGCGTGCAAAGCACTACATGCTGGAGATAGTGCCTTATaGGTGGCTGAGGAAGGTCTA +
Preference number: 5 (lower is better)
Translates to: YAPHTRQTASVACKALHAGDSAL*VAEEGL
Trigger: TAGACCTTCCTCAGCCACCAATAAGGCACTATCTCC...AGCATGTAGTGCTTTGCACGCCACAGAAGCCGTCTGCCGTGTGTGAGGAGCATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CAA 90 bp CAGCACAGGTGGTTCTCTGCTTCACTGGCAGAACCACACAAGCTTATCCTAGAGTGGGGGAGGCCACTGTaGGCTGCTCTTTGGAATAAC +
Preference number: 5 (lower is better)
Translates to: QHRWFSASLAEPHKLILEWGRPL*AALWNN
Trigger: GTTATTCCAAAGAGCAGCCAACAGTGGCCTCCCCCA...CTCTAGGATAAGCTTGTGTGGTTCTGCCAGTGAAGCAGAGAACCACCTGTGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CAA 90 bp CTGATCATTTCCCTTGAACACAGGCCAGGAACGTGCCTTGTGTGTTTAGGTGGGGTCCACAAGGAAGAGTaGACTGGGCCCACCGCTATA +
Preference number: 5 (lower is better)
Translates to: LIISLEHRPGTCLVCLGGVHKEE*TGPTAI
Trigger: TATAGCGGTGGGCCCAGTCAACTCTTCCTTGTGGAC...CCCACCTAAACACACAAGGCACGTTCCTGGCCTGTGTTCAAGGGAAATGATCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CAA 90 bp ATTATATCTTTCCCAGTGCTGAATCTCTTGCGTGACATGGTCCCAAGGTTCACTGCCCGGAACGCCAACTaGTGGGGTCAAGGGTGCAGG +
Preference number: 5 (lower is better)
Translates to: IISFPVLNLLRDMVPRFTARNAN*WGQGCR
Trigger: CCTGCACCCTTGACCCCACAAGTTGGCGTTCCGGGC...AGTGAACCTTGGGACCATGTCACGCAAGAGATTCAGCACTGGGAAAGATATAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CAA 90 bp CTGATCATTTCCCTTGAACACAGGCCAGGAACGTGCCTTGTGTGTTTAGGTGGGTGGGTTTGGCAAAAGTaGGCAGGGGCTTGGCGAATG +
Preference number: 5 (lower is better)
Translates to: LIISLEHRPGTCLVCLGGWVWQK*AGAWRM
Trigger: CATTCGCCAAGCCCCTGCCAACTTTTGCCAAACCCA...CCCACCTAAACACACAAGGCACGTTCCTGGCCTGTGTTCAAGGGAAATGATCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CAA 90 bp TCCCAGGGTCGCCAATTAGAGTCTGACAGTGTTCGGGCTGCTGCCTTTATAGTCGTACGGAGAGGACGGTaGTTTTTACTCTTCCCCTCC +
Preference number: 5 (lower is better)
Translates to: SQGRQLESDSVRAAAFIVVRRGR*FLLFPS
Trigger: GGAGGGGAAGAGTAAAAACAACCGTCCTCTCCGTAC...GACTATAAAGGCAGCAGCCCGAACACTGTCAGACTCTAATTGGCGACCCTGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS GCA 90 bp GGCTTGGCGAATGGCACCTGCTGCTTCAGCAGAATATTCTTCTTCTaGTCCTTGCCCTCTCTGCGAATTTTCAGAAGTCCTGGTGTTGCG +
Preference number: 5 (lower is better)
Translates to: GLANGTCCFSRIFFF*SLPSLRIFRSPGVA
Trigger: CGCAACACCAGGACTTCTGAAAATTCGCAGAGAGGGCAAGGAGCAGAAGAAGAATATTCTGCTGAAGCAGCAGGTGCCATTCGCCAAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389561.7
ENST00000611841.1
CDS CCA 90 bp TCTCCCGATCCTATCGCACCACTCCTGAGCTTTGGCATCCATCACTaGATTCAGGTCATTGTCATAAAACACGACGGTGTCCGCCTCTAC +
Preference number: 5 (lower is better)
Translates to: SPDPIAPLLSFGIHH*IQVIVIKHDGVRLY
Trigger: GTAGAGGCGGACACCGTCGTGTTTTATGACAATGACCTGAATCCAGTGATGGATGCCAAAGCTCAGGAGTGGTGCGATAGGATCGGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389561.7
ENST00000611841.1
CDS-3UTR CAA 90 bp CTATGTCAAATACCAGCTTCCCCCGAAAACTGGAGATGCGTCTTGAGTGCACTGCTGGATCTGTGGAACTaGCACCTGAGAGGTCGTCGT +
Preference number: 5 (lower is better)
Translates to: LCQIPASPENWRCVLSALLDLWN*HLRGRR
Trigger: ACGACGACCTCTCAGGTGCAAGTTCCACAGATCCAG...CAGTGCACTCAAGACGCATCTCCAGTTTTCGGGGGAAGCTGGTATTTGACATAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CAA 90 bp GCTGTCGTAAGTCCACAAGGAAGAGTTGACTGGGCCCACCGCTATAGCCAATACTTCTGCTTCTGCATTTaGATGAGGTGTTCCGGCGTC +
Preference number: 5 (lower is better)
Translates to: AVVSPQGRVDWAHRYSQYFCFCI*MRCSGV
Trigger: GACGCCGGAACACCTCATCAAAATGCAGAAGCAGAA...GTATTGGCTATAGCGGTGGGCCCAGTCAACTCTTCCTTGTGGACTTACGACAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CAA 90 bp GCTGTCGTAAGTCCACAAGGAAGAGTTGACTGGGCCCACCGCTATAGCCAATACGCCAGGGAGAACGGGTaGGTTAGAACAAACAGATTC +
Preference number: 5 (lower is better)
Translates to: AVVSPQGRVDWAHRYSQYARENG*VRTNRF
Trigger: GAATCTGTTTGTTCTAACCAACCCGTTCTCCCTGGC...GTATTGGCTATAGCGGTGGGCCCAGTCAACTCTTCCTTGTGGACTTACGACAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CAA 90 bp TGGGGGAGGCCACTGTTGGCTGCTCTTTGGAATAACAATGCAATGACTGATCATGCTCCCTGCGAGGGCTaGCTGCTCGTCATTGATAAC +
Preference number: 5 (lower is better)
Translates to: WGRPLLAALWNNNAMTDHAPCEG*LLVIDN
Trigger: GTTATCAATGACGAGCAGCAAGCCCTCGCAGGGAGC...ATGATCAGTCATTGCATTGTTATTCCAAAGAGCAGCCAACAGTGGCCTCCCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CAA 90 bp ATAGTCTGTGTTCTCAAAGTTTCCAACTCTTACTTGCCGTATTGGAATGAACCCACGAGCCCAGGGTGGTaGCAGATGCGCTGCAGCCGC +
Preference number: 5 (lower is better)
Translates to: IVCVLKVSNSYLPYWNEPTSPGW*QMRCSR
Trigger: GCGGCTGCAGCGCATCTGCAACCACCCTGGGCTCGT...GGGTTCATTCCAATACGGCAAGTAAGAGTTGGAAACTTTGAGAACACAGACTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CAA 90 bp TCTGGCAGACACTGTGGAAGCCCACGCCTTATCTTTAGAAAGTCCATTGTATGCGCCATAGACTGGAGCTaGAGAACAGCGCCGCTCGTT +
Preference number: 5 (lower is better)
Translates to: SGRHCGSPRLIFRKSIVCAIDWS*RTAPLV
Trigger: AACGAGCGGCGCTGTTCTCAAGCTCCAGTCTATGGC...GCATACAATGGACTTTCTAAAGATAAGGCGTGGGCTTCCACAGTGTCTGCCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS TCA 90 bp TTCCTTCAGCGAGCACTCGACATCAGCCTGTCCCTCACTTCAAAATaGCTGCCTCAGCCTCCCGTCCCGCATTTTCTCTTAAGTTACCAT +
Preference number: 5 (lower is better)
Translates to: FLQRALDISLSLTSK*LPQPPVPHFLLSYH
Trigger: ATGGTAACTTAAGAGAAAATGCGGGACGGGAGGCTGAGGCAGTCATTTTGAAGTGAGGGACAGGCTGATGTCGAGTGCTCGCTGAAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611739.4
CDS GCA 90 bp GTTTTCTGTGAGGAAGGTAGTTTTGCTTTAGATGAGAGGCAGCCCTaGTGCCCTGACTACTGGCACGGAGGCTTAGTAGGTGTCTTTAGC +
Preference number: 5 (lower is better)
Translates to: VFCEEGSFALDERQP*CPDYWHGGLVGVFS
Trigger: GCTAAAGACACCTACTAAGCCTCCGTGCCAGTAGTCAGGGCAGCAGGGCTGCCTCTCATCTAAAGCAAAACTACCTTCCTCACAGAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330386.7
ENST00000389561.7
ENST00000611118.1
ENST00000611739.4
ENST00000616136.1
CDS CCA 90 bp CTGTTGGGTTCGGCCCACTCCTGTCTCTTTGCTTTGAGTTCTCTGTaGCTGCCAATATATGAGAGGATTTTGAGTCCGGGACACCAACGT +
Preference number: 5 (lower is better)
Translates to: LLGSAHSCLFALSSL*LPIYERILSPGHQR
Trigger: ACGTTGGTGTCCCGGACTCAAAATCCTCTCATATATTGGCAGCCACAGAGAACTCAAAGCAAAGAGACAGGAGTGGGCCGAACCCAACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS CCA 90 bp ATTGGGGGACTCCTCTTGCCAGCAGTCATTTTCATTAAGTCAAAGTaGCTCGTGTACAGCTGGGTGTGTGTGGCATTCTCATCCTGGGCA +
Preference number: 5 (lower is better)
Translates to: IGGLLLPAVIFIKSK*LVYSWVCVAFSSWA
Trigger: TGCCCAGGATGAGAATGCCACACACACCCAGCTGTACACGAGCCACTTTGACTTAATGAAAATGACTGCTGGCAAGAGGAGTCCCCCAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389561.7
ENST00000611841.1
CDS-3UTR CAA 90 bp TACTTTTCTCCACATTTCTTATCAAGAGCTCAAGTGAGCTCCCCAGTTGATTTCGGTCTGCACTTGCACTaGGGCTGTTGGCTGCGGGGG +
Preference number: 5 (lower is better)
Translates to: YFSPHFLSRAQVSSPVDFGLHLH*GCWLRG
Trigger: CCCCCGCAGCCAACAGCCCAAGTGCAAGTGCAGACC...GAAATCAACTGGGGAGCTCACTTGAGCTCTTGATAAGAAATGTGGAGAAAAGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CAA 90 bp ATTATATCTTTCCCAGTGCTGAATCTCTTGCGTGACATGGTCCCAAGGTTCACTCTGCGAGGTCTGCACTaGCACTTGGGCTGTTGGCTG +
Preference number: 5 (lower is better)
Translates to: IISFPVLNLLRDMVPRFTLRGLH*HLGCWL
Trigger: CAGCCAACAGCCCAAGTGCAAGTGCAGACCTCGCAG...AGTGAACCTTGGGACCATGTCACGCAAGAGATTCAGCACTGGGAAAGATATAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CAA 90 bp TCCCAGGGTCGCCAATTAGAGTCTGACAGTGTTCGGGCTGCTGCCTTTATAGTCCAACTTGAGGAAGTTTaGCAACCTGGATCTGGGTCT +
Preference number: 5 (lower is better)
Translates to: SQGRQLESDSVRAAAFIVQLEEV*QPGSGS
Trigger: AGACCCAGATCCAGGTTGCAAAACTTCCTCAAGTTG...GACTATAAAGGCAGCAGCCCGAACACTGTCAGACTCTAATTGGCGACCCTGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CAA 90 bp CTGTTTAACACACTATGTCAAATACCAGCTTCCCCCGAAAACTGGAGATGCGTCCATCTTCCTCTCCGCTaGTGTCCTCCCCATCAGGCT +
Preference number: 5 (lower is better)
Translates to: LFNTLCQIPASPENWRCVHLPLR*CPPHQA
Trigger: AGCCTGATGGGGAGGACACAAGCGGAGAGGAAGATG...GACGCATCTCCAGTTTTCGGGGGAAGCTGGTATTTGACATAGTGTGTTAAACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CAA 90 bp CTGATCATTTCCCTTGAACACAGGCCAGGAACGTGCCTTGTGTGTTTAGGTGGGTCCTGTCTCTTTGCTTaGAGTTCTCTGTGGCTGCCA +
Preference number: 5 (lower is better)
Translates to: LIISLEHRPGTCLVCLGGSCLFA*SSLWLP
Trigger: TGGCAGCCACAGAGAACTCAAAGCAAAGAGACAGGA...CCCACCTAAACACACAAGGCACGTTCCTGGCCTGTGTTCAAGGGAAATGATCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CAA 90 bp AAAGAACTAAACTCTGGCAGACACTGTGGAAGCCCACGCCTTATCTTTAGAAAGCAGACGTGGAAGCTGTaGGGTTCGGCCCACTCCTGT +
Preference number: 5 (lower is better)
Translates to: KELNSGRHCGSPRLIFRKQTWKL*GSAHSC
Trigger: ACAGGAGTGGGCCGAACCCAACAGCTTCCACGTCTG...CTTTCTAAAGATAAGGCGTGGGCTTCCACAGTGTCTGCCAGAGTTTAGTTCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CAA 90 bp AGAGGAAGCCATGTTGTCACTTTTTCCATGAGCCACGTAGTACAGAGAACGCGGACAAACTCCTCAGCTTaGACCGGGAAGCCAGCATCA +
Preference number: 5 (lower is better)
Translates to: RGSHVVTFSMSHVVQRTRTNSSA*TGKPAS
Trigger: TGATGCTGGCTTCCCGGTCAAAGCTGAGGAGTTTGT...CCGCGTTCTCTGTACTACGTGGCTCATGGAAAAAGTGACAACATGGCTTCCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CAA 90 bp TTTCCAACTCTTACTTGCCGTATTGGAATGAACCCAGATTCACAAGGGGAAGGCGCTGAGGGGTCTGTTTaGTGTCGCTTCCGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: FPTLTCRIGMNPDSQGEGAEGSV*CRFRSF
Trigger: GAAGGAGCGGAAGCGACACAAAACAGACCCCTCAGC...GCCTTCCCCTTGTGAATCTGGGTTCATTCCAATACGGCAAGTAAGAGTTGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CAA 90 bp CTGATCATTTCCCTTGAACACAGGCCAGGAACGTGCCTTGTGTGTTTAGGTGGGGAGCCTTTTTCTCTTTaGCGATTCGCTCTGCACGGA +
Preference number: 5 (lower is better)
Translates to: LIISLEHRPGTCLVCLGGEPFSL*RFALHG
Trigger: TCCGTGCAGAGCGAATCGCAAAAGAGAAAAAGGCTC...CCCACCTAAACACACAAGGCACGTTCCTGGCCTGTGTTCAAGGGAAATGATCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CAA 90 bp AACACACTATGTCAAATACCAGCTTCCCCCGAAAACTGGAGATGCGTCTTGAGTGAACACCCTGAGTCGTaGCCATGGACACCAGGTCAG +
Preference number: 5 (lower is better)
Translates to: NTLCQIPASPENWRCVLSEHPES*PWTPGQ
Trigger: CTGACCTGGTGTCCATGGCAACGACTCAGGGTGTTC...ACTCAAGACGCATCTCCAGTTTTCGGGGGAAGCTGGTATTTGACATAGTGTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CAA 90 bp CGTGACATGGTCCCAAGGTTCACTAATAAAGCGTTTTCTGTGAGGAAGGTAGTTTGTGGCTTGGGACACTaGGGGCACCAAAGACCGTGC +
Preference number: 5 (lower is better)
Translates to: RDMVPRFTNKAFSVRKVVCGLGH*GHQRPC
Trigger: GCACGGTCTTTGGTGCCCCAAGTGTCCCAAGCCACA...AACTACCTTCCTCACAGAAAACGCTTTATTAGTGAACCTTGGGACCATGTCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS TCA 90 bp GCAAGTCTCTGCCATAGACTGGAGCTTGAGAACAGCGCCGCTCGTTaGCTAAATAAATCTGATCCAGGCGCTCTTTCAAGAGTCTGGTCT +
Preference number: 5 (lower is better)
Translates to: ASLCHRLELENSAAR*LNKSDPGALSRVWS
Trigger: AGACCAGACTCTTGAAAGAGCGCCTGGATCAGATTTATTTAGTCAACGAGCGGCGCTGTTCTCAAGCTCCAGTCTATGGCAGAGACTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS TCA 90 bp TGGAGGTCACCTGCACCAGAAGGCCCTTGCTATGGACATCAACTATaGCTCACTCCCAGCTGTATTCAAACTGAACGAATGGTCACCCAT +
Preference number: 5 (lower is better)
Translates to: WRSPAPEGPCYGHQL*LTPSCIQTERMVTH
Trigger: ATGGGTGACCATTCGTTCAGTTTGAATACAGCTGGGAGTGAGTCATAGTTGATGTCCATAGCAAGGGCCTTCTGGTGCAGGTGACCTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611841.1
CDS CCA 90 bp TCATTTTCATTAAGTCAAAGTGGCTCGTGTACAGCTGGGTGTGTGTaGCATTCTCATCCTGGGCATAGATCTGGCTCGTACGGAGAGGAC +
Preference number: 5 (lower is better)
Translates to: SFSLSQSGSCTAGCV*HSHPGHRSGSYGED
Trigger: GTCCTCTCCGTACGAGCCAGATCTATGCCCAGGATGAGAATGCCACACACACCCAGCTGTACACGAGCCACTTTGACTTAATGAAAATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389561.7
ENST00000611841.1
CDS CCA 90 bp AATTTCAGAATGTTAACAGTTCAATTGAGGACCCAGCCTTGCGCCTaGAAAGCGCCAAGGCACGTTTGTGCTAGAACACGTGATGGCACG +
Preference number: 5 (lower is better)
Translates to: NFRMLTVQLRTQPCA*KAPRHVCARTRDGT
Trigger: CGTGCCATCACGTGTTCTAGCACAAACGTGCCTTGGCGCTTTCCAGGCGCAAGGCTGGGTCCTCAATTGAACTGTTAACATTCTGAAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611739.4
CDS-3UTR CAA 90 bp AGGTGGTTCTCTGCTTCACTGGCAGAACCACACAAGCTTATCCTAGAGAAAATCCTGGATCTGTGGAACTaGCACCTGAGAGGTCGTCGT +
Preference number: 5 (lower is better)
Translates to: RWFSASLAEPHKLILEKILDLWN*HLRGRR
Trigger: ACGACGACCTCTCAGGTGCAAGTTCCACAGATCCAG...GATTTTCTCTAGGATAAGCTTGTGTGGTTCTGCCAGTGAAGCAGAGAACCACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CAA 90 bp TCCATTGTATGCTCCTCACACACGGCAGACGGCTTCTGTGGCGTGCAAAGCACTTTGCTGTTGAACAACTaGAGGAAGTTTTGCAACCTG +
Preference number: 5 (lower is better)
Translates to: SIVCSSHTADGFCGVQSTLLLNN*RKFCNL
Trigger: CAGGTTGCAAAACTTCCTCAAGTTGTTCAACAGCAA...AGTGCTTTGCACGCCACAGAAGCCGTCTGCCGTGTGTGAGGAGCATACAATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CAA 90 bp TATGGACCTTTTTGCTTTGGTGAAAACTTCAAAGTAAGGAGACACTGTCAATCAACTTGGGCTGCTGGCTaGGGCTGTCGGAGCTGGCGG +
Preference number: 5 (lower is better)
Translates to: YGPFCFGENFKVRRHCQSTWAAG*GCRSWR
Trigger: CCGCCAGCTCCGACAGCCCAAGCCAGCAGCCCAAGT...TGATTGACAGTGTCTCCTTACTTTGAAGTTTTCACCAAAGCAAAAAGGTCCATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CAA 90 bp TGGGGGAGGCCACTGTTGGCTGCTCTTTGGAATAACAATGCAATGACTGATCATACATCTGTACTACCATaGCCTCTGCGTGGTCCTCTG +
Preference number: 5 (lower is better)
Translates to: WGRPLLAALWNNNAMTDHTSVLP*PLRGPL
Trigger: CAGAGGACCACGCAGAGGCAATGGTAGTACAGATGT...ATGATCAGTCATTGCATTGTTATTCCAAAGAGCAGCCAACAGTGGCCTCCCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CAA 90 bp CAGCACAGGTGGTTCTCTGCTTCACTGGCAGAACCACACAAGCTTATCCTAGAGAATCTGAACAAGGGCTaGGATCCAACCTTCTGCTTC +
Preference number: 5 (lower is better)
Translates to: QHRWFSASLAEPHKLILENLNKG*DPTFCF
Trigger: GAAGCAGAAGGTTGGATCCAAGCCCTTGTTCAGATT...CTCTAGGATAAGCTTGTGTGGTTCTGCCAGTGAAGCAGAGAACCACCTGTGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CAA 90 bp TCTGGCAGACACTGTGGAAGCCCACGCCTTATCTTTAGAAAGTCCATTGTATGCCATCAGTTCCTGCCGTaGCTCACTGCTGGCATTTTC +
Preference number: 5 (lower is better)
Translates to: SGRHCGSPRLIFRKSIVCHQFLP*LTAGIF
Trigger: GAAAATGCCAGCAGTGAGCAACGGCAGGAACTGATG...GCATACAATGGACTTTCTAAAGATAAGGCGTGGGCTTCCACAGTGTCTGCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CAA 90 bp ACGCCTTCCACAACAGCACAGGTGGTTCTCTGCTTCACTGGCAGAACCACACAAAAAGGTCTTGCAATTTaGGGTGCAATGGTTTCCGTG +
Preference number: 5 (lower is better)
Translates to: TPSTTAQVVLCFTGRTTQKGLAI*GAMVSV
Trigger: CACGGAAACCATTGCACCCAAAATTGCAAGACCTTT...TTGTGTGGTTCTGCCAGTGAAGCAGAGAACCACCTGTGCTGTTGTGGAAGGCGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CAA 90 bp CAAGCCACAGCACAAAGGATACTATTGGATATGGACCTTTTTGCTTTGGTGAAACCACTCGGGGTTGTCTaGACCAGGCTCAGCTGTGGG +
Preference number: 5 (lower is better)
Translates to: QATAQRILLDMDLFALVKPLGVV*TRLSCG
Trigger: CCCACAGCTGAGCCTGGTCAAGACAACCCCGAGTGG...TTTCACCAAAGCAAAAAGGTCCATATCCAATAGTATCCTTTGTGCTGTGGCTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CAA 90 bp TCTCCACATTTCTTATCAAGAGCTCAAGTGAGCTCCCCAGTTGATTTCACTGACCTGAACTCCTGTGGCTaGGGACACTTGGGGCACCAA +
Preference number: 5 (lower is better)
Translates to: SPHFLSRAQVSSPVDFTDLNSCG*GHLGHQ
Trigger: TTGGTGCCCCAAGTGTCCCAAGCCACAGGAGTTCAG...GTCAGTGAAATCAACTGGGGAGCTCACTTGAGCTCTTGATAAGAAATGTGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS TCA 90 bp TTGGCGTTTGGCTTCCCGATATTCATCCTCTCGGCAGCTTTGAACTaGTCCATGATGAAAAGCGAGTCGATGAGAACCAAGTCCTTGCGA +
Preference number: 5 (lower is better)
Translates to: LAFGFPIFILSAALN*SMMKSESMRTKSLR
Trigger: TCGCAAGGACTTGGTTCTCATCGACTCGCTTTTCATCATGGATCAGTTCAAAGCTGCCGAGAGGATGAATATCGGGAAGCCAAACGCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS TCA 90 bp CCTGACACCCTTGTCACACCTGCACGGGGCTGCTACTTAGGTGACTaGAAGCGATCACAATCTCTCAAATCCAATGTAAAAACTTGGCAG +
Preference number: 5 (lower is better)
Translates to: PDTLVTPARGCYLGD*KRSQSLKSNVKTWQ
Trigger: CTGCCAAGTTTTTACATTGGATTTGAGAGATTGTGATCGCTTTCAGTCACCTAAGTAGCAGCCCCGTGCAGGTGTGACAAGGGTGTCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616136.1
CDS GCA 90 bp GACGGAAATTTCAGAATGTTAACAGTTCAATTGAGGACCCAGCCTTaGGCCTGGAAAGCGCCAAGGCACGTTTGTGCTAGAACACGTGAT +
Preference number: 5 (lower is better)
Translates to: DGNFRMLTVQLRTQP*AWKAPRHVCARTRD
Trigger: ATCACGTGTTCTAGCACAAACGTGCCTTGGCGCTTTCCAGGCGCAAGGCTGGGTCCTCAATTGAACTGTTAACATTCTGAAATTTCCGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611739.4
CDS-3UTR CAA 90 bp AGGTGGTTCTCTGCTTCACTGGCAGAACCACACAAGCTTATCCTAGAGAAAATCATCCTGAGAACTGTCTaGGGACGAGGTGGCATTCTG +
Preference number: 5 (lower is better)
Translates to: RWFSASLAEPHKLILEKIILRTV*GRGGIL
Trigger: CAGAATGCCACCTCGTCCCAAGACAGTTCTCAGGAT...GATTTTCTCTAGGATAAGCTTGTGTGGTTCTGCCAGTGAAGCAGAGAACCACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CAA 90 bp ATAGTCTGTGTTCTCAAAGTTTCCAACTCTTACTTGCCGTATTGGAATGAACCCCTGCGAGGTCTGCACTaGCACTTGGGCTGTTGGCTG +
Preference number: 5 (lower is better)
Translates to: IVCVLKVSNSYLPYWNEPLRGLH*HLGCWL
Trigger: CAGCCAACAGCCCAAGTGCAAGTGCAGACCTCGCAG...GGGTTCATTCCAATACGGCAAGTAAGAGTTGGAAACTTTGAGAACACAGACTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CAA 90 bp ACGCCTTCCACAACAGCACAGGTGGTTCTCTGCTTCACTGGCAGAACCACACAATTGCTGTTGAACAACTaGAGGAAGTTTTGCAACCTG +
Preference number: 5 (lower is better)
Translates to: TPSTTAQVVLCFTGRTTQLLLNN*RKFCNL
Trigger: CAGGTTGCAAAACTTCCTCAAGTTGTTCAACAGCAA...TTGTGTGGTTCTGCCAGTGAAGCAGAGAACCACCTGTGCTGTTGTGGAAGGCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CAA 90 bp CGTGACATGGTCCCAAGGTTCACTAATAAAGCGTTTTCTGTGAGGAAGGTAGTTCCAGTGCTGAATCTCTaGCGTGACATGGTCCCAAGG +
Preference number: 5 (lower is better)
Translates to: RDMVPRFTNKAFSVRKVVPVLNL*RDMVPR
Trigger: CCTTGGGACCATGTCACGCAAGAGATTCAGCACTGG...AACTACCTTCCTCACAGAAAACGCTTTATTAGTGAACCTTGGGACCATGTCACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CAA 90 bp TTTCCAACTCTTACTTGCCGTATTGGAATGAACCCAGATTCACAAGGGGAAGGCCTTGAGTGCACTGAGTaGGGCATCAGTCCCAGAAGT +
Preference number: 5 (lower is better)
Translates to: FPTLTCRIGMNPDSQGEGLECTE*GISPRS
Trigger: ACTTCTGGGACTGATGCCCAACTCAGTGCACTCAAG...GCCTTCCCCTTGTGAATCTGGGTTCATTCCAATACGGCAAGTAAGAGTTGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CAA 90 bp TTTCCAACTCTTACTTGCCGTATTGGAATGAACCCAGATTCACAAGGGGAAGGCAACTGGAGATGCGTCTaGAGTGCACTGAGTTGGGCA +
Preference number: 5 (lower is better)
Translates to: FPTLTCRIGMNPDSQGEGNWRCV*SALSWA
Trigger: TGCCCAACTCAGTGCACTCAAGACGCATCTCCAGTT...GCCTTCCCCTTGTGAATCTGGGTTCATTCCAATACGGCAAGTAAGAGTTGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CAA 90 bp CAGCACAGGTGGTTCTCTGCTTCACTGGCAGAACCACACAAGCTTATCCTAGAGATATATGAGAGGATTTaGAGTCCGGGACACCAACGT +
Preference number: 5 (lower is better)
Translates to: QHRWFSASLAEPHKLILEIYERI*SPGHQR
Trigger: ACGTTGGTGTCCCGGACTCAAAATCCTCTCATATAT...CTCTAGGATAAGCTTGTGTGGTTCTGCCAGTGAAGCAGAGAACCACCTGTGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CAA 90 bp AGGTGGTTCTCTGCTTCACTGGCAGAACCACACAAGCTTATCCTAGAGAAAATCATGCCAAGCAGAGGTTaGATTGGGGGACTCCTCTTG +
Preference number: 5 (lower is better)
Translates to: RWFSASLAEPHKLILEKIMPSRG*IGGLLL
Trigger: CAAGAGGAGTCCCCCAATCAAACCTCTGCTTGGCAT...GATTTTCTCTAGGATAAGCTTGTGTGGTTCTGCCAGTGAAGCAGAGAACCACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CAA 90 bp GCCAAAATCAAGCCACAGCACAAAGGATACTATTGGATATGGACCTTTTTGCTTGGTCGTCGTCGTCTGTaGCTGCTGCTGCTGTTGCTG +
Preference number: 5 (lower is better)
Translates to: AKIKPQHKGYYWIWTFLLGRRRL*LLLLLL
Trigger: CAGCAACAGCAGCAGCAGCAACAGACGACGACGACC...AAGCAAAAAGGTCCATATCCAATAGTATCCTTTGTGCTGTGGCTTGATTTTGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS TCA 90 bp CTACAGGAGTTAACAACGTCACTGACAAGATCCCAATTAGGTGTGTaGGCAGGTGACACGATTGTGAGGTTCAAAGGCAGCTCCAGTAAC +
Preference number: 5 (lower is better)
Translates to: LQELTTSLTRSQLGV*AGDTIVRFKGSSSN
Trigger: GTTACTGGAGCTGCCTTTGAACCTCACAATCGTGTCACCTGCTCACACACCTAATTGGGATCTTGTCAGTGACGTTGTTAACTCCTGTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389561.7
ENST00000611841.1
CDS TCA 90 bp GACAAATCAGTACTCGAAAGAAAAACTCCAGGAGCACAAGGTCACTaGCATAGTCACTCCCAGACCAGGAGAAGCCAGAAGTGGCTTGTT +
Preference number: 5 (lower is better)
Translates to: DKSVLERKTPGAQGH*HSHSQTRRSQKWLV
Trigger: AACAAGCCACTTCTGGCTTCTCCTGGTCTGGGAGTGACTATGTCAGTGACCTTGTGCTCCTGGAGTTTTTCTTTCGAGTACTGATTTGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611841.1
CDS-3UTR CAA 90 bp GCCAAAATCAAGCCACAGCACAAAGGATACTATTGGATATGGACCTTTTTGCTTAGTCTTCACCGGGATTaGGAGCTGTGTCTGGGCCTC +
Preference number: 5 (lower is better)
Translates to: AKIKPQHKGYYWIWTFLLSLHRD*ELCLGL
Trigger: GAGGCCCAGACACAGCTCCAAATCCCGGTGAAGACT...AAGCAAAAAGGTCCATATCCAATAGTATCCTTTGTGCTGTGGCTTGATTTTGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CAA 90 bp AGAGGAAGCCATGTTGTCACTTTTTCCATGAGCCACGTAGTACAGAGAACGCGGATTAGAAAGTTCTGTTaGGTGGTCCACAACGCCTTC +
Preference number: 5 (lower is better)
Translates to: RGSHVVTFSMSHVVQRTRIRKFC*VVHNAF
Trigger: GAAGGCGTTGTGGACCACCAAACAGAACTTTCTAAT...CCGCGTTCTCTGTACTACGTGGCTCATGGAAAAAGTGACAACATGGCTTCCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CAA 90 bp TATGGACCTTTTTGCTTTGGTGAAAACTTCAAAGTAAGGAGACACTGTCAATCAGGAAGCAGAGGCAACTaGCTGGATGCTGGCCACGGG +
Preference number: 5 (lower is better)
Translates to: YGPFCFGENFKVRRHCQSGSRGN*LDAGHG
Trigger: CCCGTGGCCAGCATCCAGCAAGTTGCCTCTGCTTCC...TGATTGACAGTGTCTCCTTACTTTGAAGTTTTCACCAAAGCAAAAAGGTCCATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CAA 90 bp CGTGACATGGTCCCAAGGTTCACTAATAAAGCGTTTTCTGTGAGGAAGGTAGTTCTTGAGTGCACTGAGTaGGGCATCAGTCCCAGAAGT +
Preference number: 5 (lower is better)
Translates to: RDMVPRFTNKAFSVRKVVLECTE*GISPRS
Trigger: ACTTCTGGGACTGATGCCCAACTCAGTGCACTCAAG...AACTACCTTCCTCACAGAAAACGCTTTATTAGTGAACCTTGGGACCATGTCACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CAA 90 bp ATTATATCTTTCCCAGTGCTGAATCTCTTGCGTGACATGGTCCCAAGGTTCACTACATCTGTACTACCATaGCCTCTGCGTGGTCCTCTG +
Preference number: 5 (lower is better)
Translates to: IISFPVLNLLRDMVPRFTTSVLP*PLRGPL
Trigger: CAGAGGACCACGCAGAGGCAATGGTAGTACAGATGT...AGTGAACCTTGGGACCATGTCACGCAAGAGATTCAGCACTGGGAAAGATATAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CAA 90 bp AGAGGAAGCCATGTTGTCACTTTTTCCATGAGCCACGTAGTACAGAGAACGCGGGGCGGAAACTCCACATaGCAAATATTCAGAATCCCA +
Preference number: 5 (lower is better)
Translates to: RGSHVVTFSMSHVVQRTRGGNST*QIFRIP
Trigger: TGGGATTCTGAATATTTGCAATGTGGAGTTTCCGCC...CCGCGTTCTCTGTACTACGTGGCTCATGGAAAAAGTGACAACATGGCTTCCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CAA 90 bp AGGTGGTTCTCTGCTTCACTGGCAGAACCACACAAGCTTATCCTAGAGAAAATCCCAAAGGAAACACACTaGAGAGACAGGAGACCCTCA +
Preference number: 5 (lower is better)
Translates to: RWFSASLAEPHKLILEKIPKETH*RDRRPS
Trigger: TGAGGGTCTCCTGTCTCTCAAGTGTGTTTCCTTTGG...GATTTTCTCTAGGATAAGCTTGTGTGGTTCTGCCAGTGAAGCAGAGAACCACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CAA 90 bp ATAGTCTGTGTTCTCAAAGTTTCCAACTCTTACTTGCCGTATTGGAATGAACCCTCAGAAGTCCTGGTGTaGCGCGGTCAAACAGGGACC +
Preference number: 5 (lower is better)
Translates to: IVCVLKVSNSYLPYWNEPSEVLV*RGQTGT
Trigger: GGTCCCTGTTTGACCGCGCAACACCAGGACTTCTGA...GGGTTCATTCCAATACGGCAAGTAAGAGTTGGAAACTTTGAGAACACAGACTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CAA 90 bp TATGGACCTTTTTGCTTTGGTGAAAACTTCAAAGTAAGGAGACACTGTCAATCAGGCGACGCCAGGCGCTaGTTGATGGACTGGAAGGTG +
Preference number: 5 (lower is better)
Translates to: YGPFCFGENFKVRRHCQSGDARR*LMDWKV
Trigger: CACCTTCCAGTCCATCAACAAGCGCCTGGCGTCGCC...TGATTGACAGTGTCTCCTTACTTTGAAGTTTTCACCAAAGCAAAAAGGTCCATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS TCA 90 bp CCACTCCTGTCTCTTTGCTTTGAGTTCTCTGTGGCTGCCAATATATaGGAGGATTTTGAGTCCGGGACACCAACGTTTCAATTCAAGCTC +
Preference number: 5 (lower is better)
Translates to: PLLSLCFEFSVAANI*EDFESGTPTFQFKL
Trigger: GAGCTTGAATTGAAACGTTGGTGTCCCGGACTCAAAATCCTCTCATATATTGGCAGCCACAGAGAACTCAAAGCAAAGAGACAGGAGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS CCA 90 bp TCAATTGGTGTAAGCTGCTCCATGAAGTCAGCTAGCTCCTCTAATTaGGATGGTTCTTCATCACACGGCATGTTCTCAGAGTCTGATGAC +
Preference number: 5 (lower is better)
Translates to: SIGVSCSMKSASSSN*DGSSSHGMFSESDD
Trigger: GTCATCAGACTCTGAGAACATGCCGTGTGATGAAGAACCATCCCAATTAGAGGAGCTAGCTGACTTCATGGAGCAGCTTACACCAATTGA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389561.7
ENST00000611841.1
CDS-3UTR CAA 90 bp TACTTTTCTCCACATTTCTTATCAAGAGCTCAAGTGAGCTCCCCAGTTGATTTCTGTTCCGGCGTCAGCTaGCCCACAGCTTTGATCTGT +
Preference number: 5 (lower is better)
Translates to: YFSPHFLSRAQVSSPVDFCSGVS*PTALIC
Trigger: ACAGATCAAAGCTGTGGGCAAGCTGACGCCGGAACA...GAAATCAACTGGGGAGCTCACTTGAGCTCTTGATAAGAAATGTGGAGAAAAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CAA 90 bp TACTTTTCTCCACATTTCTTATCAAGAGCTCAAGTGAGCTCCCCAGTTGATTTCGCTGGCCACGGGTGTTaGCTGTTGAACAACTTGAGG +
Preference number: 5 (lower is better)
Translates to: YFSPHFLSRAQVSSPVDFAGHGC*LLNNLR
Trigger: CCTCAAGTTGTTCAACAGCAAACACCCGTGGCCAGC...GAAATCAACTGGGGAGCTCACTTGAGCTCTTGATAAGAAATGTGGAGAAAAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CAA 90 bp TACTTTTCTCCACATTTCTTATCAAGAGCTCAAGTGAGCTCCCCAGTTGATTTCCCAGTGCTGAATCTCTaGCGTGACATGGTCCCAAGG +
Preference number: 5 (lower is better)
Translates to: YFSPHFLSRAQVSSPVDFPVLNL*RDMVPR
Trigger: CCTTGGGACCATGTCACGCAAGAGATTCAGCACTGG...GAAATCAACTGGGGAGCTCACTTGAGCTCTTGATAAGAAATGTGGAGAAAAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CAA 90 bp AAAGAACTAAACTCTGGCAGACACTGTGGAAGCCCACGCCTTATCTTTAGAAAGGCCAGGGAGAACGGGTaGGTTAGAACAAACAGATTC +
Preference number: 5 (lower is better)
Translates to: KELNSGRHCGSPRLIFRKARENG*VRTNRF
Trigger: GAATCTGTTTGTTCTAACCAACCCGTTCTCCCTGGC...CTTTCTAAAGATAAGGCGTGGGCTTCCACAGTGTCTGCCAGAGTTTAGTTCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CAA 90 bp TCTCCACATTTCTTATCAAGAGCTCAAGTGAGCTCCCCAGTTGATTTCACTGACCCAAAGGAAACACACTaGAGAGACAGGAGACCCTCA +
Preference number: 5 (lower is better)
Translates to: SPHFLSRAQVSSPVDFTDPKETH*RDRRPS
Trigger: TGAGGGTCTCCTGTCTCTCAAGTGTGTTTCCTTTGG...GTCAGTGAAATCAACTGGGGAGCTCACTTGAGCTCTTGATAAGAAATGTGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CAA 90 bp TGGGGGAGGCCACTGTTGGCTGCTCTTTGGAATAACAATGCAATGACTGATCATGTTTCCAACTCTTACTaGCCGTATTGGAATGAACCC +
Preference number: 5 (lower is better)
Translates to: WGRPLLAALWNNNAMTDHVSNSY*PYWNEP
Trigger: GGGTTCATTCCAATACGGCAAGTAAGAGTTGGAAAC...ATGATCAGTCATTGCATTGTTATTCCAAAGAGCAGCCAACAGTGGCCTCCCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CAA 90 bp CTATGTCAAATACCAGCTTCCCCCGAAAACTGGAGATGCGTCTTGAGTGCACTGGCTTGCTGCTCGTCATaGATAACCTCAGATTTTTCT +
Preference number: 5 (lower is better)
Translates to: LCQIPASPENWRCVLSALACCSS*ITSDFS
Trigger: AGAAAAATCTGAGGTTATCAATGACGAGCAGCAAGC...CAGTGCACTCAAGACGCATCTCCAGTTTTCGGGGGAAGCTGGTATTTGACATAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CAA 90 bp CAAGCCACAGCACAAAGGATACTATTGGATATGGACCTTTTTGCTTTGGTGAAAACGTCCGCAATGTCCTaGGCGTTTGGCTTCCCGATA +
Preference number: 5 (lower is better)
Translates to: QATAQRILLDMDLFALVKTSAMS*AFGFPI
Trigger: TATCGGGAAGCCAAACGCCAAGGACATTGCGGACGT...TTTCACCAAAGCAAAAAGGTCCATATCCAATAGTATCCTTTGTGCTGTGGCTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CAA 90 bp CAAGCCACAGCACAAAGGATACTATTGGATATGGACCTTTTTGCTTTGGTGAAACTCCTGAGTGCCAGGTaGCAGGATAACGTCCTCGTA +
Preference number: 5 (lower is better)
Translates to: QATAQRILLDMDLFALVKLLSAR*QDNVLV
Trigger: TACGAGGACGTTATCCTGCAACCTGGCACTCAGGAG...TTTCACCAAAGCAAAAAGGTCCATATCCAATAGTATCCTTTGTGCTGTGGCTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CAA 90 bp CAAGCCACAGCACAAAGGATACTATTGGATATGGACCTTTTTGCTTTGGTGAAAAGGATGCTCAGGACGTaGACAAAGTGCCCGCTCTTC +
Preference number: 5 (lower is better)
Translates to: QATAQRILLDMDLFALVKRMLRT*TKCPLF
Trigger: GAAGAGCGGGCACTTTGTCAACGTCCTGAGCATCCT...TTTCACCAAAGCAAAAAGGTCCATATCCAATAGTATCCTTTGTGCTGTGGCTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CAA 90 bp AACACACTATGTCAAATACCAGCTTCCCCCGAAAACTGGAGATGCGTCTTGAGTTTCTTCTTCTGCTCCTaGCCCTCTCTGCGAATTTTC +
Preference number: 5 (lower is better)
Translates to: NTLCQIPASPENWRCVLSFFFCS*PSLRIF
Trigger: GAAAATTCGCAGAGAGGGCAAGGAGCAGAAGAAGAA...ACTCAAGACGCATCTCCAGTTTTCGGGGGAAGCTGGTATTTGACATAGTGTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS GCA 90 bp CTCAATACTCTTGAGGGCCTCTATGAAAGGTCTTGCAATTTTGGGTaGAATGGTTTCCGTGACAGAAGGTTCCTGAGAAAGCACCACAAA +
Preference number: 5 (lower is better)
Translates to: LNTLEGLYERSCNFG*NGFRDRRFLRKHHK
Trigger: TTTGTGGTGCTTTCTCAGGAACCTTCTGTCACGGAAACCATTGCACCCAAAATTGCAAGACCTTTCATAGAGGCCCTCAAGAGTATTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389561.7
ENST00000611841.1
CDS-3UTR CAA 90 bp CAAGCCACAGCACAAAGGATACTATTGGATATGGACCTTTTTGCTTTGGTGAAAAACTGGAGATGCGTCTaGAGTGCACTGAGTTGGGCA +
Preference number: 5 (lower is better)
Translates to: QATAQRILLDMDLFALVKNWRCV*SALSWA
Trigger: TGCCCAACTCAGTGCACTCAAGACGCATCTCCAGTT...TTTCACCAAAGCAAAAAGGTCCATATCCAATAGTATCCTTTGTGCTGTGGCTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CAA 90 bp CAGCACAGGTGGTTCTCTGCTTCACTGGCAGAACCACACAAGCTTATCCTAGAGTATTTTGCCTTTTGTTaGGTATGCTATCAATGCCCT +
Preference number: 5 (lower is better)
Translates to: QHRWFSASLAEPHKLILEYFAFC*VCYQCP
Trigger: AGGGCATTGATAGCATACCAAACAAAAGGCAAAATA...CTCTAGGATAAGCTTGTGTGGTTCTGCCAGTGAAGCAGAGAACCACCTGTGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CAA 90 bp AGGTGGTTCTCTGCTTCACTGGCAGAACCACACAAGCTTATCCTAGAGAAAATCTCAACATCAGCTCACTaGGACTTTCTGAGGATGAAG +
Preference number: 5 (lower is better)
Translates to: RWFSASLAEPHKLILEKISTSAH*DFLRMK
Trigger: CTTCATCCTCAGAAAGTCCAAGTGAGCTGATGTTGA...GATTTTCTCTAGGATAAGCTTGTGTGGTTCTGCCAGTGAAGCAGAGAACCACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS CCA 90 bp GGTAGCAACAGCCTACCTTCCTTGGCTAAATTAGAAAGTTCTGTTTaGTGGTCCACAACGCCTTCATTTGCTTCCTCCTCTTCAATTGTT +
Preference number: 5 (lower is better)
Translates to: GSNSLPSLAKLESSV*WSTTPSFASSSSIV
Trigger: AACAATTGAAGAGGAGGAAGCAAATGAAGGCGTTGTGGACCACCAAACAGAACTTTCTAATTTAGCCAAGGAAGGTAGGCTGTTGCTACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333577.8
CDS-3UTR CAA 90 bp ATAGTCTGTGTTCTCAAAGTTTCCAACTCTTACTTGCCGTATTGGAATGAACCCCATCAGCTGCTGTATTaGATAACTGGGAGACTGGGG +
Preference number: 5 (lower is better)
Translates to: IVCVLKVSNSYLPYWNEPHQLLY*ITGRLG
Trigger: CCCCAGTCTCCCAGTTATCAAATACAGCAGCTGATG...GGGTTCATTCCAATACGGCAAGTAAGAGTTGGAAACTTTGAGAACACAGACTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CAA 90 bp ATTATATCTTTCCCAGTGCTGAATCTCTTGCGTGACATGGTCCCAAGGTTCACTGTTCTCCAGAGTTATTaGTTCTGTCAGCGTATCCTG +
Preference number: 5 (lower is better)
Translates to: IISFPVLNLLRDMVPRFTVLQSY*FCQRIL
Trigger: CAGGATACGCTGACAGAACAAATAACTCTGGAGAAC...AGTGAACCTTGGGACCATGTCACGCAAGAGATTCAGCACTGGGAAAGATATAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CAA 90 bp CGTGACATGGTCCCAAGGTTCACTAATAAAGCGTTTTCTGTGAGGAAGGTAGTTCACGGGTGTTTGCTGTaGAACAACTTGAGGAAGTTT +
Preference number: 5 (lower is better)
Translates to: RDMVPRFTNKAFSVRKVVHGCLL*NNLRKF
Trigger: AAACTTCCTCAAGTTGTTCAACAGCAAACACCCGTG...AACTACCTTCCTCACAGAAAACGCTTTATTAGTGAACCTTGGGACCATGTCACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CAA 90 bp TGGGGGAGGCCACTGTTGGCTGCTCTTTGGAATAACAATGCAATGACTGATCATGCACAAAGGATACTATaGGATATGGACCTTTTTGCT +
Preference number: 5 (lower is better)
Translates to: WGRPLLAALWNNNAMTDHAQRIL*DMDLFA
Trigger: AGCAAAAAGGTCCATATCCAATAGTATCCTTTGTGC...ATGATCAGTCATTGCATTGTTATTCCAAAGAGCAGCCAACAGTGGCCTCCCCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CAA 90 bp CGTGACATGGTCCCAAGGTTCACTAATAAAGCGTTTTCTGTGAGGAAGGTAGTTGTTTCCAACTCTTACTaGCCGTATTGGAATGAACCC +
Preference number: 5 (lower is better)
Translates to: RDMVPRFTNKAFSVRKVVVSNSY*PYWNEP
Trigger: GGGTTCATTCCAATACGGCAAGTAAGAGTTGGAAAC...AACTACCTTCCTCACAGAAAACGCTTTATTAGTGAACCTTGGGACCATGTCACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CAA 90 bp TACTTTTCTCCACATTTCTTATCAAGAGCTCAAGTGAGCTCCCCAGTTGATTTCCAATGTCCTTGGCGTTaGGCTTCCCGATATTCATCC +
Preference number: 5 (lower is better)
Translates to: YFSPHFLSRAQVSSPVDFQCPWR*ASRYSS
Trigger: GGATGAATATCGGGAAGCCAAACGCCAAGGACATTG...GAAATCAACTGGGGAGCTCACTTGAGCTCTTGATAAGAAATGTGGAGAAAAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CAA 90 bp AGGTGGTTCTCTGCTTCACTGGCAGAACCACACAAGCTTATCCTAGAGAAAATCAGATACTCAATACTCTaGAGGGCCTCTATGAAAGGT +
Preference number: 5 (lower is better)
Translates to: RWFSASLAEPHKLILEKIRYSIL*RASMKG
Trigger: ACCTTTCATAGAGGCCCTCAAGAGTATTGAGTATCT...GATTTTCTCTAGGATAAGCTTGTGTGGTTCTGCCAGTGAAGCAGAGAACCACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS TCA 90 bp ATCTGTGATAAAATCAGCACCCGACGTCCTTCAGATTTCAATTTCTaGAGCAAGATAGCTAAAGCTTCCAACTTCCCTGAGTCGAACTGC +
Preference number: 5 (lower is better)
Translates to: ICDKISTRRPSDFNF*SKIAKASNFPESNC
Trigger: GCAGTTCGACTCAGGGAAGTTGGAAGCTTTAGCTATCTTGCTTCAGAAATTGAAATCTGAAGGACGTCGGGTGCTGATTTTATCACAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389561.7
ENST00000611841.1
CDS GCA 90 bp CTTCCAAACAGTAACAAATGTGTCACGAATAGAGAAATACCTTTCTaGCAACACAGACGCGTGCTTGGGGTTCTTCTGAAAGGGATTCAT +
Preference number: 5 (lower is better)
Translates to: LPNSNKCVTNREIPF*QHRRVLGVLLKGIH
Trigger: ATGAATCCCTTTCAGAAGAACCCCAAGCACGCGTCTGTGTTGGCAGAAAGGTATTTCTCTATTCGTGACACATTTGTTACTGTTTGGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611841.1
CDS CCA 90 bp GACATCAACTATGACTCACTCCCAGCTGTATTCAAACTGAACGAATaGTCACCCATGATGTTCAATGAGGGAGGAGTACACAAAGACAAA +
Preference number: 5 (lower is better)
Translates to: DINYDSLPAVFKLNE*SPMMFNEGGVHKDK
Trigger: TTTGTCTTTGTGTACTCCTCCCTCATTGAACATCATGGGTGACCATTCGTTCAGTTTGAATACAGCTGGGAGTGAGTCATAGTTGATGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611841.1
CDS-3UTR CAA 90 bp AACACACTATGTCAAATACCAGCTTCCCCCGAAAACTGGAGATGCGTCTTGAGTGCACAAAGGATACTATaGGATATGGACCTTTTTGCT +
Preference number: 5 (lower is better)
Translates to: NTLCQIPASPENWRCVLSAQRIL*DMDLFA
Trigger: AGCAAAAAGGTCCATATCCAATAGTATCCTTTGTGC...ACTCAAGACGCATCTCCAGTTTTCGGGGGAAGCTGGTATTTGACATAGTGTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CAA 90 bp TATGGACCTTTTTGCTTTGGTGAAAACTTCAAAGTAAGGAGACACTGTCAATCACAGAAGCAGACGTTGTaGGCTCTGCAGGGTGAAAAC +
Preference number: 5 (lower is better)
Translates to: YGPFCFGENFKVRRHCQSQKQTL*ALQGEN
Trigger: GTTTTCACCCTGCAGAGCCAACAACGTCTGCTTCTG...TGATTGACAGTGTCTCCTTACTTTGAAGTTTTCACCAAAGCAAAAAGGTCCATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CAA 90 bp CAAGCCACAGCACAAAGGATACTATTGGATATGGACCTTTTTGCTTTGGTGAAAATTGGGGGACTCCTCTaGCCAGCAGTCATTTTCATT +
Preference number: 5 (lower is better)
Translates to: QATAQRILLDMDLFALVKIGGLL*PAVIFI
Trigger: AATGAAAATGACTGCTGGCAAGAGGAGTCCCCCAAT...TTTCACCAAAGCAAAAAGGTCCATATCCAATAGTATCCTTTGTGCTGTGGCTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS TCA 90 bp CCCAGCTGTATTCAAACTGAACGAATGGTCACCCATGATGTTCAATaGGGGAGGAGTACACAAAGACAAATCAGTACTCGAAAGAAAAAC +
Preference number: 5 (lower is better)
Translates to: PSCIQTERMVTHDVQ*GRSTQRQISTRKKN
Trigger: GTTTTTCTTTCGAGTACTGATTTGTCTTTGTGTACTCCTCCCTCATTGAACATCATGGGTGACCATTCGTTCAGTTTGAATACAGCTGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611841.1
CDS-3UTR CAA 90 bp TATGGACCTTTTTGCTTTGGTGAAAACTTCAAAGTAAGGAGACACTGTCAATCATTCTGCTTCTGCATTTaGATGAGGTGTTCCGGCGTC +
Preference number: 5 (lower is better)
Translates to: YGPFCFGENFKVRRHCQSFCFCI*MRCSGV
Trigger: GACGCCGGAACACCTCATCAAAATGCAGAAGCAGAA...TGATTGACAGTGTCTCCTTACTTTGAAGTTTTCACCAAAGCAAAAAGGTCCATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CAA 90 bp AACACACTATGTCAAATACCAGCTTCCCCCGAAAACTGGAGATGCGTCTTGAGTTATTTTGCCTTTTGTTaGGTATGCTATCAATGCCCT +
Preference number: 5 (lower is better)
Translates to: NTLCQIPASPENWRCVLSYFAFC*VCYQCP
Trigger: AGGGCATTGATAGCATACCAAACAAAAGGCAAAATA...ACTCAAGACGCATCTCCAGTTTTCGGGGGAAGCTGGTATTTGACATAGTGTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS TCA 90 bp AACACGCTAAGTGCACAACGATTTGCTGAACTCACTGAACTTAGATaGCACTGGAATGAAATCCTTCCAAACAGTAACAAATGTGTCACG +
Preference number: 5 (lower is better)
Translates to: NTLSAQRFAELTELR*HWNEILPNSNKCVT
Trigger: CGTGACACATTTGTTACTGTTTGGAAGGATTTCATTCCAGTGTCATCTAAGTTCAGTGAGTTCAGCAAATCGTTGTGCACTTAGCGTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611841.1
CDS-3UTR CAA 90 bp TATGGACCTTTTTGCTTTGGTGAAAACTTCAAAGTAAGGAGACACTGTCAATCAAATCTGAACAAGGGCTaGGATCCAACCTTCTGCTTC +
Preference number: 5 (lower is better)
Translates to: YGPFCFGENFKVRRHCQSNLNKG*DPTFCF
Trigger: GAAGCAGAAGGTTGGATCCAAGCCCTTGTTCAGATT...TGATTGACAGTGTCTCCTTACTTTGAAGTTTTCACCAAAGCAAAAAGGTCCATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CAA 90 bp ATAGTCTGTGTTCTCAAAGTTTCCAACTCTTACTTGCCGTATTGGAATGAACCCTTCTCTTCAATGGAATaGCCACTCACAAGCCTGTAT +
Preference number: 5 (lower is better)
Translates to: IVCVLKVSNSYLPYWNEPFSSME*PLTSLY
Trigger: ATACAGGCTTGTGAGTGGCAATTCCATTGAAGAGAA...GGGTTCATTCCAATACGGCAAGTAAGAGTTGGAAACTTTGAGAACACAGACTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS-3UTR CAA 90 bp TATGGACCTTTTTGCTTTGGTGAAAACTTCAAAGTAAGGAGACACTGTCAATCACACGGGTGTTTGCTGTaGAACAACTTGAGGAAGTTT +
Preference number: 5 (lower is better)
Translates to: YGPFCFGENFKVRRHCQSHGCLL*NNLRKF
Trigger: AAACTTCCTCAAGTTGTTCAACAGCAAACACCCGTG...TGATTGACAGTGTCTCCTTACTTTGAAGTTTTCACCAAAGCAAAAAGGTCCATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CAA 90 bp CAAGCCACAGCACAAAGGATACTATTGGATATGGACCTTTTTGCTTTGGTGAAAAAGGAAGGAACCATATaGCCTTTCTTTGGAATGGAA +
Preference number: 5 (lower is better)
Translates to: QATAQRILLDMDLFALVKKEGTI*PFFGME
Trigger: TTCCATTCCAAAGAAAGGCAATATGGTTCCTTCCTT...TTTCACCAAAGCAAAAAGGTCCATATCCAATAGTATCCTTTGTGCTGTGGCTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CAA 90 bp TATGGACCTTTTTGCTTTGGTGAAAACTTCAAAGTAAGGAGACACTGTCAATCAGGCGGAAACTCCACATaGCAAATATTCAGAATCCCA +
Preference number: 5 (lower is better)
Translates to: YGPFCFGENFKVRRHCQSGGNST*QIFRIP
Trigger: TGGGATTCTGAATATTTGCAATGTGGAGTTTCCGCC...TGATTGACAGTGTCTCCTTACTTTGAAGTTTTCACCAAAGCAAAAAGGTCCATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS-3UTR CAA 90 bp GCCAAAATCAAGCCACAGCACAAAGGATACTATTGGATATGGACCTTTTTGCTTAATTCAAGCTCCCACTaGAGTATGTTACAACTTCTC +
Preference number: 5 (lower is better)
Translates to: AKIKPQHKGYYWIWTFLLNSSSH*SMLQLL
Trigger: GAGAAGTTGTAACATACTCAAGTGGGAGCTTGAATT...AAGCAAAAAGGTCCATATCCAATAGTATCCTTTGTGCTGTGGCTTGATTTTGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS TCA 90 bp ACACGGTATGTCTTTCCAAATACTTCTCCACAAGAGGTCATGCCATaGGAAAATTTACAAAGATCAACAAAGTTTAAAGTGGCCCAACAG +
Preference number: 5 (lower is better)
Translates to: TRYVFPNTSPQEVMP*ENLQRSTKFKVAQQ
Trigger: CTGTTGGGCCACTTTAAACTTTGTTGATCTTTGTAAATTTTCTCATGGCATGACCTCTTGTGGAGAAGTATTTGGAAAGACATACCGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611739.4
CDS-3UTR CAA 90 bp GCCAAAATCAAGCCACAGCACAAAGGATACTATTGGATATGGACCTTTTTGCTTGTTTCTCTCCTTTTCTaGCTCAATAGAAGTATGGAA +
Preference number: 5 (lower is better)
Translates to: AKIKPQHKGYYWIWTFLLVSLLF*LNRSME
Trigger: TTCCATACTTCTATTGAGCAAGAAAAGGAGAGAAAC...AAGCAAAAAGGTCCATATCCAATAGTATCCTTTGTGCTGTGGCTTGATTTTGGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS CCA 72 bp GGGCTGCGCTCCGGCCGCGTCAGGAGGGCGGGAGGATaGAAGCCGCGCCGCAGCCGCTCAGTGCATCCGGGG +
Preference number: 6 (lower is better)
Translates to: GLRSGRVRRAGG*KPRRSRSVHPG
Trigger: CCCCGGATGCACTGAGCGGCTGCGGCGCGGCTTCCATCCTCCCGCCCTCCTGACGCGGCCGGAGCGCAGCCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS CCA 72 bp GCCGTGGCTGGGGAGCCGACTGCCCGTGGCGGGGGCTaGGTGTGCACCACCTGGGCGGGAGCAGAGCCTCCC +
Preference number: 6 (lower is better)
Translates to: AVAGEPTARGGG*VCTTWAGAEPP
Trigger: GGGAGGCTCTGCTCCCGCCCAGGTGGTGCACACCCAGCCCCCGCCACGGGCAGTCGGCTCCCCAGCCACGGC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS GCA 72 bp GCTGGGGAGCCGACTGCCCGTGGCGGGGGCTGGGTGTaGACCACCTGGGCGGGAGCAGAGCCTCCCGGCGTA +
Preference number: 6 (lower is better)
Translates to: AGEPTARGGGWV*TTWAGAEPPGV
Trigger: TACGCCGGGAGGCTCTGCTCCCGCCCAGGTGGTGCACACCCAGCCCCCGCCACGGGCAGTCGGCTCCCCAGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS CCA 72 bp AGGGAGCGAAGGGAGCTGCGGGGGACGGGGGTGGGTTaGGGTGGGCCGGCTGCTCCTCACCCTCGCTGCCAG +
Preference number: 6 (lower is better)
Translates to: RERRELRGTGVG*GGPAAPHPRCQ
Trigger: CTGGCAGCGAGGGTGAGGAGCAGCCGGCCCACCCCAACCCACCCCCGTCCCCCGCAGCTCCCTTCGCTCCCT
75% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000332482.8
ENST00000333577.8
ENST00000389561.7
CDS CCA 72 bp GCGGGCACCTGGGCTGGGTTGGGAGCGCCTGGAGTCTaGAGCGGGGCCGACGCCGTGGTCACCACCTGCTGC +
Preference number: 6 (lower is better)
Translates to: AGTWAGLGAPGV*SGADAVVTTCC
Trigger: GCAGCAGGTGGTGACCACGGCGTCGGCCCCGCTCCAGACTCCAGGCGCTCCCAACCCAGCCCAGGTGCCCGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330386.7
ENST00000389561.7
ENST00000611118.1
ENST00000611739.4
ENST00000616136.1
CDS CCA 72 bp CCGACTGCCCGTGGCGGGGGCTGGGTGTGCACCACCTaGGCGGGAGCAGAGCCTCCCGGCGTAGTCAAGGCC +
Preference number: 6 (lower is better)
Translates to: PTARGGGWVCTT*AGAEPPGVVKA
Trigger: GGCCTTGACTACGCCGGGAGGCTCTGCTCCCGCCCAGGTGGTGCACACCCAGCCCCCGCCACGGGCAGTCGG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS GCA 72 bp CACGCGGCCCGGAACGCCAACTTGTGGGGTCAAGGGTaGAGGGCTGGGACCGCCGGCCGGGGGCTTGCTTCC +
Preference number: 6 (lower is better)
Translates to: HAARNANLWGQG*RAGTAGRGLAS
Trigger: GGAAGCAAGCCCCCGGCCGGCGGTCCCAGCCCTGCACCCTTGACCCCACAAGTTGGCGTTCCGGGCCGCGTG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS CCA 72 bp GGCTGCTGGCTTGGGCTGTCGGAGCTGGCGGGCACCTaGGCTGGGTTGGGAGCGCCTGGAGTCTGGAGCGGG +
Preference number: 6 (lower is better)
Translates to: GCWLGLSELAGT*AGLGAPGVWSG
Trigger: CCCGCTCCAGACTCCAGGCGCTCCCAACCCAGCCCAGGTGCCCGCCAGCTCCGACAGCCCAAGCCAGCAGCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330386.7
ENST00000389561.7
ENST00000611118.1
ENST00000611739.4
ENST00000616136.1
CDS CCA 72 bp CCGGAACGCCAACTTGTGGGGTCAAGGGTGCAGGGCTaGGACCGCCGGCCGGGGGCTTGCTTCCCAGGGCGC +
Preference number: 6 (lower is better)
Translates to: PERQLVGSRVQG*DRRPGACFPGR
Trigger: GCGCCCTGGGAAGCAAGCCCCCGGCCGGCGGTCCCAGCCCTGCACCCTTGACCCCACAAGTTGGCGTTCCGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS CCA 72 bp CGTTGCCATGGACACCAGGTCAGGGGTCGCCGTGGCTaGGGAGCCGACTGCCCGTGGCGGGGGCTGGGTGTG +
Preference number: 6 (lower is better)
Translates to: RCHGHQVRGRRG*GADCPWRGLGV
Trigger: CACACCCAGCCCCCGCCACGGGCAGTCGGCTCCCCAGCCACGGCGACCCCTGACCTGGTGTCCATGGCAACG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS CCA 72 bp CGGCGGCTGCGAGGTCTGCACTTGCACTTGGGCTGTTaGCTGCGGGGGCGCAGACTGGGCCTGTGGCGGTGG +
Preference number: 6 (lower is better)
Translates to: RRLRGLHLHLGC*LRGRRLGLWRW
Trigger: CCACCGCCACAGGCCCAGTCTGCGCCCCCGCAGCCAACAGCCCAAGTGCAAGTGCAGACCTCGCAGCCGCCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS CAA 72 bp GAAGTGGGAACCCGGGTGAGCCGGGCCACCTGGAGGTaGGCCACGGTGGTGCCCGTCAGCAGGGCACCAGGC +
Preference number: 6 (lower is better)
Translates to: EVGTRVSRATWR*ATVVPVSRAPG
Trigger: GCCTGGTGCCCTGCTGACGGGCACCACCGTGGCCAACCTCCAGGTGGCCCGGCTCACCCGGGTTCCCACTTC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS TCA 72 bp CCCCGCGACGTTCATGGGCAGGGTGGTGACTCCCGGTaGGGAGACCACAGCTGCCGGGACGGACACCACCGG +
Preference number: 6 (lower is better)
Translates to: PRDVHGQGGDSR*GDHSCRDGHHR
Trigger: CCGGTGGTGTCCGTCCCGGCAGCTGTGGTCTCCTCACCGGGAGTCACCACCCTGCCCATGAACGTCGCGGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330386.7
ENST00000389561.7
ENST00000611739.4
CDS GCA 72 bp GGGCTCTGCTGCTGCGGCGGCTGCGAGGTCTGCACTTaGACTTGGGCTGTTGGCTGCGGGGGCGCAGACTGG +
Preference number: 6 (lower is better)
Translates to: GLCCCGGCEVCT*TWAVGCGGADW
Trigger: CCAGTCTGCGCCCCCGCAGCCAACAGCCCAAGTGCAAGTGCAGACCTCGCAGCCGCCGCAGCAGCAGAGCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS GCA 72 bp TGGGCAGTCGCGGTCACTGCAGGGATCATCTGCACCTaGTGCCCGGCCGCCGTCGCCTGCGTGAGCGCCACA +
Preference number: 6 (lower is better)
Translates to: WAVAVTAGIICT*CPAAVACVSAT
Trigger: TGTGGCGCTCACGCAGGCGACGGCGGCCGGGCAGCAGGTGCAGATGATCCCTGCAGTGACCGCGACTGCCCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330386.7
ENST00000389561.7
ENST00000611118.1
ENST00000611739.4
ENST00000616136.1
CDS GCA 72 bp ACCACCTGGGCAGTCGCGGTCACTGCAGGGATCATCTaGACCTGCTGCCCGGCCGCCGTCGCCTGCGTGAGC +
Preference number: 6 (lower is better)
Translates to: TTWAVAVTAGII*TCCPAAVACVS
Trigger: GCTCACGCAGGCGACGGCGGCCGGGCAGCAGGTGCAGATGATCCCTGCAGTGACCGCGACTGCCCAGGTGGT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330386.7
ENST00000389561.7
ENST00000611118.1
ENST00000611739.4
ENST00000616136.1
CDS CAA 72 bp CTGCTGCTGCGGCGGCTGCGAGGTCTGCACTTGCACTaGGGCTGTTGGCTGCGGGGGCGCAGACTGGGCCTG +
Preference number: 6 (lower is better)
Translates to: LLLRRLRGLHLH*GCWLRGRRLGL
Trigger: CAGGCCCAGTCTGCGCCCCCGCAGCCAACAGCCCAAGTGCAAGTGCAGACCTCGCAGCCGCCGCAGCAGCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS CAA 72 bp GGGGCTCTGCTGCTGCGGCGGCTGCGAGGTCTGCACTaGCACTTGGGCTGTTGGCTGCGGGGGCGCAGACTG +
Preference number: 6 (lower is better)
Translates to: GALLLRRLRGLH*HLGCWLRGRRL
Trigger: CAGTCTGCGCCCCCGCAGCCAACAGCCCAAGTGCAAGTGCAGACCTCGCAGCCGCCGCAGCAGCAGAGCCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS GCA 72 bp GGGATCATCTGCACCTGCTGCCCGGCCGCCGTCGCCTaGGTGAGCGCCACAGTCTGTGGAGAAGCCTGCTGG +
Preference number: 6 (lower is better)
Translates to: GIICTCCPAAVA*VSATVCGEACW
Trigger: CCAGCAGGCTTCTCCACAGACTGTGGCGCTCACGCAGGCGACGGCGGCCGGGCAGCAGGTGCAGATGATCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330386.7
ENST00000389561.7
ENST00000611118.1
ENST00000611739.4
ENST00000616136.1
CDS GCA 72 bp CATCCCTGCCGCTGCCTCCAGGCCTACCTCTGCCCATaGGGCATGGCCGCCAGCTTCTCCTCCAGGAGGCCT +
Preference number: 6 (lower is better)
Translates to: HPCRCLQAYLCP*GMAASFSSRRP
Trigger: AGGCCTCCTGGAGGAGAAGCTGGCGGCCATGCCGCATGGGCAGAGGTAGGCCTGGAGGCAGCGGCAGGGATG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616136.1
CDS GCA 72 bp CAGAGACCATGCCGCGCTCAAGACTCCCGGGACGCCTaGCCGCTCTGGGCCCTATGGCAGAACCCAGCCCCT +
Preference number: 6 (lower is better)
Translates to: QRPCRAQDSRDA*PLWALWQNPAP
Trigger: AGGGGCTGGGTTCTGCCATAGGGCCCAGAGCGGGCAGGCGTCCCGGGAGTCTTGAGCGCGGCATGGTCTCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616136.1
CDS CCA 72 bp CGGATACTCCAGTGGCCCCGCCACGTAGGAAGAGCCTaGGTGCCGGGGCTCGACGAGCCCAGGGTGGTTGCA +
Preference number: 6 (lower is better)
Translates to: RILQWPRHVGRA*VPGLDEPRVVA
Trigger: TGCAACCACCCTGGGCTCGTCGAGCCCCGGCACCCAGGCTCTTCCTACGTGGCGGGGCCACTGGAGTATCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS CCA 72 bp TGCAGCAGGCGTGGAGCCGTGGTCTGCCGCAGCTGCTaGAAGTACGGCGCAGCGTGCTCTCTCAGGCCCTGC +
Preference number: 6 (lower is better)
Translates to: CSRRGAVVCRSC*KYGAACSLRPC
Trigger: GCAGGGCCTGAGAGAGCACGCTGCGCCGTACTTCCAGCAGCTGCGGCAGACCACGGCTCCACGCCTGCTGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389561.7
ENST00000611841.1
CDS CCA 72 bp TGCAGGCTGGTCTTTGGAACCCGGCCACGGCGGAGCTaGTGGCACTACCCAGACACCCTGCGCCTCCCGGCT +
Preference number: 6 (lower is better)
Translates to: CRLVFGTRPRRS*WHYPDTLRLPA
Trigger: AGCCGGGAGGCGCAGGGTGTCTGGGTAGTGCCACCAGCTCCGCCGTGGCCGGGTTCCAAAGACCAGCCTGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616136.1
CDS CCA 72 bp TGCCGCGCTCAAGACTCCCGGGACGCCTGCCCGCTCTaGGCCCTATGGCAGAACCCAGCCCCTTTCCAGCCT +
Preference number: 6 (lower is better)
Translates to: CRAQDSRDACPL*ALWQNPAPFQP
Trigger: AGGCTGGAAAGGGGCTGGGTTCTGCCATAGGGCCCAGAGCGGGCAGGCGTCCCGGGAGTCTTGAGCGCGGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616136.1
CDS CAA 72 bp GAGCCTGGGTGCCGGGGCTCGACGAGCCCAGGGTGGTaGCAGATGCGCTGCAGCCGCACAAGGATGCTCAGG +
Preference number: 6 (lower is better)
Translates to: EPGCRGSTSPGW*QMRCSRTRMLR
Trigger: CCTGAGCATCCTTGTGCGGCTGCAGCGCATCTGCAACCACCCTGGGCTCGTCGAGCCCCGGCACCCAGGCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS CAA 90 bp CCCGGCGTAGTCAAGGCCCCAGGAGCCACTGGCGACGCCAGGCGCTaGTTGATGGACTGGAAGGTGGCAGCTGGGACCCCTGCGATGGTG +
Preference number: 6 (lower is better)
Translates to: PGVVKAPGATGDARR*LMDWKVAAGTPAMV
Trigger: CACCATCGCAGGGGTCCCAGCTGCCACCTTCCAGTCCATCAACAAGCGCCTGGCGTCGCCAGTGGCTCCTGGGGCCTTGACTACGCCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS TCA 72 bp CGGGTCGCTGGCGACCACTGCCACCAGAGAGGCCTGTaGAACCAGGCTCAAGCCCAGGACGGGAGGGTGTGC +
Preference number: 6 (lower is better)
Translates to: RVAGDHCHQRGL*NQAQAQDGRVC
Trigger: GCACACCCTCCCGTCCTGGGCTTGAGCCTGGTTTCACAGGCCTCTCTGGTGGCAGTGGTCGCCAGCGACCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611739.4
CDS GCA 72 bp AGCCTGGGTGCCGGGGCTCGACGAGCCCAGGGTGGTTaGAGATGCGCTGCAGCCGCACAAGGATGCTCAGGA +
Preference number: 6 (lower is better)
Translates to: SLGAGARRAQGG*RCAAAAQGCSG
Trigger: TCCTGAGCATCCTTGTGCGGCTGCAGCGCATCTGCAACCACCCTGGGCTCGTCGAGCCCCGGCACCCAGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS GCA 72 bp AACTGCAGCAGGCGTGGAGCCGTGGTCTGCCGCAGCTaGTGGAAGTACGGCGCAGCGTGCTCTCTCAGGCCC +
Preference number: 6 (lower is better)
Translates to: NCSRRGAVVCRS*WKYGAACSLRP
Trigger: GGGCCTGAGAGAGCACGCTGCGCCGTACTTCCAGCAGCTGCGGCAGACCACGGCTCCACGCCTGCTGCAGTT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389561.7
ENST00000611841.1
CDS GCA 72 bp GGCCACGGCGGAGCTGGTGGCACTACCCAGACACCCTaGGCCTCCCGGCTTTGTGTCCCCTCAGTGCTCACT +
Preference number: 6 (lower is better)
Translates to: GHGGAGGTTQTP*ASRLCVPSVLT
Trigger: AGTGAGCACTGAGGGGACACAAAGCCGGGAGGCGCAGGGTGTCTGGGTAGTGCCACCAGCTCCGCCGTGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616136.1
CDS CCA 72 bp GAAGAGCCTGGGTGCCGGGGCTCGACGAGCCCAGGGTaGTTGCAGATGCGCTGCAGCCGCACAAGGATGCTC +
Preference number: 6 (lower is better)
Translates to: EEPGCRGSTSPG*LQMRCSRTRML
Trigger: GAGCATCCTTGTGCGGCTGCAGCGCATCTGCAACCACCCTGGGCTCGTCGAGCCCCGGCACCCAGGCTCTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS CCA 72 bp TGCTGGAGGCCGAGGCGGGCTGGTGTCGTGGAGCACTaGCGGAAGCCTGAGAGGTCTGAAACGGGGCTGCTG +
Preference number: 6 (lower is better)
Translates to: CWRPRRAGVVEH*RKPERSETGLL
Trigger: CAGCAGCCCCGTTTCAGACCTCTCAGGCTTCCGCCAGTGCTCCACGACACCAGCCCGCCTCGGCCTCCAGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS CCA 72 bp ACGATCTGGAGGACGCTGCCTTGCAGCTGCAGCGGCTaGCCCGCTGTGAGCTGCCGGAGCTGGCTGTGTGAC +
Preference number: 6 (lower is better)
Translates to: TIWRTLPCSCSG*PAVSCRSWLCD
Trigger: GTCACACAGCCAGCTCCGGCAGCTCACAGCGGGCCAGCCGCTGCAGCTGCAAGGCAGCGTCCTCCAGATCGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS CCA 72 bp GCCTCAGCTCAGGGAACTGCAGCAGGCGTGGAGCCGTaGTCTGCCGCAGCTGCTGGAAGTACGGCGCAGCGT +
Preference number: 6 (lower is better)
Translates to: ASAQGTAAGVEP*SAAAAGSTAQR
Trigger: ACGCTGCGCCGTACTTCCAGCAGCTGCGGCAGACCACGGCTCCACGCCTGCTGCAGTTCCCTGAGCTGAGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389561.7
ENST00000611841.1
CDS CCA 72 bp AGGCTGGTCTTTGGAACCCGGCCACGGCGGAGCTGGTaGCACTACCCAGACACCCTGCGCCTCCCGGCTTTG +
Preference number: 6 (lower is better)
Translates to: RLVFGTRPRRSW*HYPDTLRLPAL
Trigger: CAAAGCCGGGAGGCGCAGGGTGTCTGGGTAGTGCCACCAGCTCCGCCGTGGCCGGGTTCCAAAGACCAGCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616136.1
CDS CCA 72 bp CAGCGGTCGTGCCAAGTGGGGATGCAGGCTGGTCTTTaGAACCCGGCCACGGCGGAGCTGGTGGCACTACCC +
Preference number: 6 (lower is better)
Translates to: QRSCQVGMQAGL*NPATAELVALP
Trigger: GGGTAGTGCCACCAGCTCCGCCGTGGCCGGGTTCCAAAGACCAGCCTGCATCCCCACTTGGCACGACCGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616136.1
CDS CCA 72 bp TTCCCTGCAGCGGTCGTGCCAAGTGGGGATGCAGGCTaGTCTTTGGAACCCGGCCACGGCGGAGCTGGTGGC +
Preference number: 6 (lower is better)
Translates to: FPAAVVPSGDAG*SLEPGHGGAGG
Trigger: GCCACCAGCTCCGCCGTGGCCGGGTTCCAAAGACCAGCCTGCATCCCCACTTGGCACGACCGCTGCAGGGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616136.1
CDS CAA 72 bp TCTGAGGGCCCACACCAGCCATCCGAAGCCCGGGACTaGGGCTGGGTGCCACCGATGAGCCACCACGAGCAG +
Preference number: 6 (lower is better)
Translates to: SEGPHQPSEARD*GWVPPMSHHEQ
Trigger: CTGCTCGTGGTGGCTCATCGGTGGCACCCAGCCCAAGTCCCGGGCTTCGGATGGCTGGTGTGGGCCCTCAGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616136.1
CDS CAA 90 bp AACGTGGGGTCTGAGGGCCCACACCAGCCATCCGAAGCCCGGGACTaGGGCTGGGTGCCACCGATGAGCCACCACGAGCAGAAGTCCCTG +
Preference number: 6 (lower is better)
Translates to: NVGSEGPHQPSEARD*GWVPPMSHHEQKSL
Trigger: CAGGGACTTCTGCTCGTGGTGGCTCATCGGTGGCACCCAGCCCAAGTCCCGGGCTTCGGATGGCTGGTGTGGGCCCTCAGACCCCACGTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616136.1
CDS TCA 72 bp AAGAGAGGCTCCAGCGTGGGCAGCTGCTGGGGGCCCTaGTTTCAAGGGCCCTCCCTGCACAAGGCCCTCACG +
Preference number: 6 (lower is better)
Translates to: KRGSSVGSCWGP*FQGPSLHKALT
Trigger: CGTGAGGGCCTTGTGCAGGGAGGGCCCTTGAAATCAGGGCCCCCAGCAGCTGCCCACGCTGGAGCCTCTCTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611118.1
CDS TCA 72 bp CATCCGAAGCCCGGGACTTGGGCTGGGTGCCACCGATaGGCCACCACGAGCAGAAGTCCCTGGAGGCAGAGC +
Preference number: 6 (lower is better)
Translates to: HPKPGTWAGCHR*ATTSRSPWRQS
Trigger: GCTCTGCCTCCAGGGACTTCTGCTCGTGGTGGCTCATCGGTGGCACCCAGCCCAAGTCCCGGGCTTCGGATG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616136.1
CDS GCA 72 bp GGTGATCTGCTGTGCGGTGATCTTCTGCTGGACGGCTaGCGGGCCCTGTGCAGCCTGGGGCTGGATGGCCTT +
Preference number: 6 (lower is better)
Translates to: GDLLCGDLLLDG*RALCSLGLDGL
Trigger: AAGGCCATCCAGCCCCAGGCTGCACAGGGCCCGGCAGCCGTCCAGCAGAAGATCACCGCACAGCAGATCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330386.7
ENST00000389561.7
ENST00000611739.4
CDS GCA 72 bp AGCTCAGGGAACTGCAGCAGGCGTGGAGCCGTGGTCTaGCGCAGCTGCTGGAAGTACGGCGCAGCGTGCTCT +
Preference number: 6 (lower is better)
Translates to: SSGNCSRRGAVV*RSCWKYGAACS
Trigger: AGAGCACGCTGCGCCGTACTTCCAGCAGCTGCGGCAGACCACGGCTCCACGCCTGCTGCAGTTCCCTGAGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389561.7
ENST00000611841.1
CDS GCA 72 bp CCTGAGTCGAACTGCACCAGCCTCAGCTCAGGGAACTaGAGCAGGCGTGGAGCCGTGGTCTGCCGCAGCTGC +
Preference number: 6 (lower is better)
Translates to: PESNCTSLSSGN*SRRGAVVCRSC
Trigger: GCAGCTGCGGCAGACCACGGCTCCACGCCTGCTGCAGTTCCCTGAGCTGAGGCTGGTGCAGTTCGACTCAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389561.7
ENST00000611841.1
CDS GCA 72 bp GCAGCTGCTGGGGGCCCTGATTTCAAGGGCCCTCCCTaGACAAGGCCCTCACGGACCCTGGTCTCTTGCTGG +
Preference number: 6 (lower is better)
Translates to: AAAGGPDFKGPP*TRPSRTLVSCW
Trigger: CCAGCAAGAGACCAGGGTCCGTGAGGGCCTTGTGCAGGGAGGGCCCTTGAAATCAGGGCCCCCAGCAGCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611118.1
CDS GCA 72 bp CATGCACTTCCCTGCAGCGGTCGTGCCAAGTGGGGATaGAGGCTGGTCTTTGGAACCCGGCCACGGCGGAGC +
Preference number: 6 (lower is better)
Translates to: HALPCSGRAKWG*RLVFGTRPRRS
Trigger: GCTCCGCCGTGGCCGGGTTCCAAAGACCAGCCTGCATCCCCACTTGGCACGACCGCTGCAGGGAAGTGCATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616136.1
CDS GCA 72 bp TGGGGAGAGACTGCGAAATTAGGGCCGCAGAGACCATaGCGCGCTCAAGACTCCCGGGACGCCTGCCCGCTC +
Preference number: 6 (lower is better)
Translates to: WGETAKLGPQRP*RAQDSRDACPL
Trigger: GAGCGGGCAGGCGTCCCGGGAGTCTTGAGCGCGGCATGGTCTCTGCGGCCCTAATTTCGCAGTCTCTCCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616136.1
CDS CCA 72 bp GAGGCCTGCACCTGCACCTTTCCAGGTGTGGGAACGTaGAGGGCCAGCTGTGCAGGCTGCGAGGGAGGGATG +
Preference number: 6 (lower is better)
Translates to: EACTCTFPGVGT*RASCAGCEGGM
Trigger: CATCCCTCCCTCGCAGCCTGCACAGCTGGCCCTCCACGTTCCCACACCTGGAAAGGTGCAGGTGCAGGCCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332482.8
ENST00000333577.8
ENST00000389561.7
CDS CCA 72 bp GGGGGCATTCCTCCTTGTGCGGTCGGCATTAGTTGCTaGAGAGGAACGCCTGCGTCCGCCCCTGGGTGCTGG +
Preference number: 6 (lower is better)
Translates to: GGIPPCAVGISC*RGTPASAPGCW
Trigger: CCAGCACCCAGGGGCGGACGCAGGCGTTCCTCTCCAGCAACTAATGCCGACCGCACAAGGAGGAATGCCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333577.8
ENST00000389561.7
CDS CCA 72 bp CTGCTGCTGCTTTTGCCTCCGGATTGGCAGAGAACGTaGCGATGGGCGGCCGTCCTCGAAGCGGGCCCTGTG +
Preference number: 6 (lower is better)
Translates to: LLLLLPPDWQRT*RWAAVLEAGPV
Trigger: CACAGGGCCCGCTTCGAGGACGGCCGCCCATCGCCACGTTCTCTGCCAATCCGGAGGCAAAAGCAGCAGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS CCA 72 bp AGCTGCAGCGGCTGGCCCGCTGTGAGCTGCCGGAGCTaGCTGTGTGACAGGGTGAACTTGCTGCCCTGGAAC +
Preference number: 6 (lower is better)
Translates to: SCSGWPAVSCRS*LCDRVNLLPWN
Trigger: GTTCCAGGGCAGCAAGTTCACCCTGTCACACAGCCAGCTCCGGCAGCTCACAGCGGGCCAGCCGCTGCAGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS CCA 72 bp CTGCACCAGCCTCAGCTCAGGGAACTGCAGCAGGCGTaGAGCCGTGGTCTGCCGCAGCTGCTGGAAGTACGG +
Preference number: 6 (lower is better)
Translates to: LHQPQLRELQQA*SRGLPQLLEVR
Trigger: CCGTACTTCCAGCAGCTGCGGCAGACCACGGCTCCACGCCTGCTGCAGTTCCCTGAGCTGAGGCTGGTGCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389561.7
ENST00000611841.1
CDS CAA 90 bp GGCGTAGTCAAGGCCCCAGGAGCCACTGGCGACGCCAGGCGCTTGTaGATGGACTGGAAGGTGGCAGCTGGGACCCCTGCGATGGTGTTC +
Preference number: 6 (lower is better)
Translates to: GVVKAPGATGDARRL*MDWKVAAGTPAMVF
Trigger: GAACACCATCGCAGGGGTCCCAGCTGCCACCTTCCAGTCCATCAACAAGCGCCTGGCGTCGCCAGTGGCTCCTGGGGCCTTGACTACGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS CAA 90 bp CGGCGGAGCTGGTGGCACTACCCAGACACCCTGCGCCTCCCGGCTTaGTGTCCCCTCAGTGCTCACTCCCTCTCCCTCTGGGTTCCAAAG +
Preference number: 6 (lower is better)
Translates to: RRSWWHYPDTLRLPA*CPLSAHSLSLWVPK
Trigger: CTTTGGAACCCAGAGGGAGAGGGAGTGAGCACTGAGGGGACACAAAGCCGGGAGGCGCAGGGTGTCTGGGTAGTGCCACCAGCTCCGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616136.1
CDS TCA 72 bp TGCATCAGCATGGCCACGTCTGCCCATGGACCACCATaGCGCACCCAGGGACTGCTGACCAGGCCCAGGAGG +
Preference number: 6 (lower is better)
Translates to: CISMATSAHGPP*RTQGLLTRPRR
Trigger: CCTCCTGGGCCTGGTCAGCAGTCCCTGGGTGCGTCATGGTGGTCCATGGGCAGACGTGGCCATGCTGATGCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616136.1
CDS GCA 72 bp GAGTTTCTGCTGAACCACCTGGGCAGTCGCGGTCACTaGAGGGATCATCTGCACCTGCTGCCCGGCCGCCGT +
Preference number: 6 (lower is better)
Translates to: EFLLNHLGSRGH*RDHLHLLPGRR
Trigger: ACGGCGGCCGGGCAGCAGGTGCAGATGATCCCTGCAGTGACCGCGACTGCCCAGGTGGTTCAGCAGAAACTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330386.7
ENST00000389561.7
ENST00000611118.1
ENST00000611739.4
ENST00000616136.1
CDS GCA 72 bp AGCCTGACAGCAGGGACCCTCATCTGTAACTTGGGCTaGTGGCTTGGGCTGTCGGAGCTGGCGGGCACCTGG +
Preference number: 6 (lower is better)
Translates to: SLTAGTLICNLG*WLGLSELAGTW
Trigger: CCAGGTGCCCGCCAGCTCCGACAGCCCAAGCCAGCAGCCCAAGTTACAGATGAGGGTCCCTGCTGTCAGGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330386.7
ENST00000389561.7
ENST00000611118.1
ENST00000611739.4
ENST00000616136.1
CDS GCA 72 bp CTGCCCATGCCTACGGCTTACATGCACAGCGCCCTCTaGTCCAGCCACACAGGCCTTGGTCCCTGCAGGGTC +
Preference number: 6 (lower is better)
Translates to: LPMPTAYMHSAL*SSHTGLGPCRV
Trigger: GACCCTGCAGGGACCAAGGCCTGTGTGGCTGGAGCAGAGGGCGCTGTGCATGTAAGCCGTAGGCATGGGCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611739.4
CDS CCA 72 bp AGAGCCTCCCGGCGTAGTCAAGGCCCCAGGAGCCACTaGCGACGCCAGGCGCTTGTTGATGGACTGGAAGGT +
Preference number: 6 (lower is better)
Translates to: RASRRSQGPRSH*RRQALVDGLEG
Trigger: ACCTTCCAGTCCATCAACAAGCGCCTGGCGTCGCCAGTGGCTCCTGGGGCCTTGACTACGCCGGGAGGCTCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS CCA 72 bp CACTTGGGGCACCAAAGACCGTGCCGGGGTCTGCACTaGGGTCAGGTTGGTAGTGACCACGGCCGAGGCTGT +
Preference number: 6 (lower is better)
Translates to: HLGHQRPCRGLH*GQVGSDHGRGC
Trigger: ACAGCCTCGGCCGTGGTCACTACCAACCTGACCCCAGTGCAGACCCCGGCACGGTCTTTGGTGCCCCAAGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS CCA 72 bp CACCAGCAGGGCTTCACCCATAGGGCCCCTGGGCACTaGTCTTCTGCAGGAGGTAGCAGCGGCTCACAGCAC +
Preference number: 6 (lower is better)
Translates to: HQQGFTHRAPGH*SSAGGSSGSQH
Trigger: GTGCTGTGAGCCGCTGCTACCTCCTGCAGAAGACCAGTGCCCAGGGGCCCTATGGGTGAAGCCCTGCTGGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616136.1
CDS CAA 72 bp TGGTGGCACTACCCAGACACCCTGCGCCTCCCGGCTTaGTGTCCCCTCAGTGCTCACTCCCTCTCCCTCTGG +
Preference number: 6 (lower is better)
Translates to: WWHYPDTLRLPA*CPLSAHSLSLW
Trigger: CCAGAGGGAGAGGGAGTGAGCACTGAGGGGACACAAAGCCGGGAGGCGCAGGGTGTCTGGGTAGTGCCACCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616136.1
CDS TCA 72 bp CTTGTGTCCTCCCCATCAGGCTTCGGCCGGGGCCACTaGGAACTCGGCAGGAAGGCGCCTTCGTACAGCTTC +
Preference number: 6 (lower is better)
Translates to: LVSSPSGFGRGH*ELGRKAPSYSF
Trigger: GAAGCTGTACGAAGGCGCCTTCCTGCCGAGTTCTCAGTGGCCCCGGCCGAAGCCTGATGGGGAGGACACAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS TCA 72 bp GCCGAGGCTGTCACAGAAGTGACCGCTCGAACACCCTaGGTCGTTGCCATGGACACCAGGTCAGGGGTCGCC +
Preference number: 6 (lower is better)
Translates to: AEAVTEVTARTP*VVAMDTRSGVA
Trigger: GGCGACCCCTGACCTGGTGTCCATGGCAACGACTCAGGGTGTTCGAGCGGTCACTTCTGTGACAGCCTCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS GCA 72 bp ATCTGCTGGTTTCCCCCGACGACAGGGCCCACGCTCTaGAGGGTGATGTTCACGTTCTGCCCGGTTGCAGGG +
Preference number: 6 (lower is better)
Translates to: ICWFPPTTGPTL*RVMFTFCPVAG
Trigger: CCCTGCAACCGGGCAGAACGTGAACATCACCCTGCAGAGCGTGGGCCCTGTCGTCGGGGGAAACCAGCAGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332482.8
ENST00000333577.8
ENST00000389561.7
CDS GCA 72 bp GAGCTGTGTCTGGGCCTCTACCACTTGCGGCTGCTGTaGAAACTGCAGCGCAGAGGAGAGGGCTGCAGTGGG +
Preference number: 6 (lower is better)
Translates to: ELCLGLYHLRLL*KLQRRGEGCSG
Trigger: CCCACTGCAGCCCTCTCCTCTGCGCTGCAGTTTGCACAGCAGCCGCAAGTGGTAGAGGCCCAGACACAGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332482.8
ENST00000333577.8
ENST00000389561.7
CDS GCA 72 bp CGGGCCGTGGAGGCGGCTATCCGCCTCAGTCTGCTCTaGTCTTCCTTCTTCCCCCTTTCTTCACGGAGCTGC +
Preference number: 6 (lower is better)
Translates to: RAVEAAIRLSLL*SSFFPLSSRSC
Trigger: GCAGCTCCGTGAAGAAAGGGGGAAGAAGGAAGAGCAGAGCAGACTGAGGCGGATAGCCGCCTCCACGGCCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000332482.8
ENST00000333577.8
ENST00000389561.7
CDS GCA 72 bp CGGGGCTCGACGAGCCCAGGGTGGTTGCAGATGCGCTaGAGCCGCACAAGGATGCTCAGGACGTTGACAAAG +
Preference number: 6 (lower is better)
Translates to: RGSTSPGWLQMR*SRTRMLRTLTK
Trigger: CTTTGTCAACGTCCTGAGCATCCTTGTGCGGCTGCAGCGCATCTGCAACCACCCTGGGCTCGTCGAGCCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS GCA 72 bp CTGCATGTGCACGGGCTGGGCCACCACGGTCTGTCCTaGAGGCAGCAAAAGCCCCTTAGTCAGCACACTGGG +
Preference number: 6 (lower is better)
Translates to: LHVHGLGHHGLS*RQQKPLSQHTG
Trigger: CCCAGTGTGCTGACTAAGGGGCTTTTGCTGCCTGCAGGACAGACCGTGGTGGCCCAGCCCGTGCACATGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611739.4
CDS GCA 72 bp GGACCACACCCACCTGTGCATCAGCATGGCCACGTCTaGCCATGGACCACCATGACGCACCCAGGGACTGCT +
Preference number: 6 (lower is better)
Translates to: GPHPPVHQHGHV*PWTTMTHPGTA
Trigger: AGCAGTCCCTGGGTGCGTCATGGTGGTCCATGGGCAGACGTGGCCATGCTGATGCACAGGTGGGTGTGGTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616136.1
CDS CCA 72 bp AAAGCTGAGAGGCCTGCACCTGCACCTTTCCAGGTGTaGGAACGTGGAGGGCCAGCTGTGCAGGCTGCGAGG +
Preference number: 6 (lower is better)
Translates to: KAERPAPAPFQV*ERGGPAVQAAR
Trigger: CCTCGCAGCCTGCACAGCTGGCCCTCCACGTTCCCACACCTGGAAAGGTGCAGGTGCAGGCCTCTCAGCTTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332482.8
ENST00000333577.8
ENST00000389561.7
CDS CCA 72 bp CCTCAGAGGGGAGCTCAGGTAGGGCCTGGAGATCCCTaGGACCAGGAAGTGCACCATGGTCCAGAGCTCCAG +
Preference number: 6 (lower is better)
Translates to: PQRGAQVGPGDP*DQEVHHGPELQ
Trigger: CTGGAGCTCTGGACCATGGTGCACTTCCTGGTCCCAGGGATCTCCAGGCCCTACCTGAGCTCCCCTCTGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS CCA 72 bp GCAGGGCTCAACCCAGTCACATGGGGATGTGGGTGTTaGCACACGGGCAGGGGCCCAACGAGGCAGATCCTA +
Preference number: 6 (lower is better)
Translates to: AGLNPVTWGCGC*HTGRGPTRQIL
Trigger: TAGGATCTGCCTCGTTGGGCCCCTGCCCGTGTGCCAACACCCACATCCCCATGTGACTGGGTTGAGCCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611841.1
CDS CCA 72 bp GGAAACAGCAGGGCTCAACCCAGTCACATGGGGATGTaGGTGTTGGCACACGGGCAGGGGCCCAACGAGGCA +
Preference number: 6 (lower is better)
Translates to: GNSRAQPSHMGM*VLAHGQGPNEA
Trigger: TGCCTCGTTGGGCCCCTGCCCGTGTGCCAACACCCACATCCCCATGTGACTGGGTTGAGCCCTGCTGTTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611841.1
CDS CCA 72 bp CGCTCAGGGAACAGGGCAGCTCCCCACACAGCCATGTaGCTTCCCATCAGAGCCCGCCTTCTAGCTCTAGCC +
Preference number: 6 (lower is better)
Translates to: RSGNRAAPHTAM*LPIRARLLALA
Trigger: GGCTAGAGCTAGAAGGCGGGCTCTGATGGGAAGCCACATGGCTGTGTGGGGAGCTGCCCTGTTCCCTGAGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616136.1
CDS CCA 72 bp CACCCACCTGTGCATCAGCATGGCCACGTCTGCCCATaGACCACCATGACGCACCCAGGGACTGCTGACCAG +
Preference number: 6 (lower is better)
Translates to: HPPVHQHGHVCP*TTMTHPGTADQ
Trigger: CTGGTCAGCAGTCCCTGGGTGCGTCATGGTGGTCCATGGGCAGACGTGGCCATGCTGATGCACAGGTGGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616136.1
CDS CAA 90 bp CCAGGAAACAGCAGGGCTCAACCCAGTCACATGGGGATGTGGGTGTaGGCACACGGGCAGGGGCCCAACGAGGCAGATCCTAACCAGTCC +
Preference number: 6 (lower is better)
Translates to: PGNSRAQPSHMGMWV*AHGQGPNEADPNQS
Trigger: GGACTGGTTAGGATCTGCCTCGTTGGGCCCCTGCCCGTGTGCCAACACCCACATCCCCATGTGACTGGGTTGAGCCCTGCTGTTTCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611841.1
CDS TCA 72 bp CTGCTGGGCGGTGCAGGGATGGGAACATTGGGCTGCTaGGTCTTCACCGGGATTTGGAGCTGTGTCTGGGCC +
Preference number: 6 (lower is better)
Translates to: LLGGAGMGTLGC*VFTGIWSCVWA
Trigger: GGCCCAGACACAGCTCCAAATCCCGGTGAAGACTCAGCAGCCCAATGTTCCCATCCCTGCACCGCCCAGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332482.8
ENST00000333577.8
ENST00000389561.7
CDS TCA 72 bp TCTAGCCAGACAGCAGTGCCAACAGAACGTGGGGTCTaGGGGCCCACACCAGCCATCCGAAGCCCGGGACTT +
Preference number: 6 (lower is better)
Translates to: SSQTAVPTERGV*GPTPAIRSPGL
Trigger: AAGTCCCGGGCTTCGGATGGCTGGTGTGGGCCCTCAGACCCCACGTTCTGTTGGCACTGCTGTCTGGCTAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616136.1
CDS TCA 72 bp CAGCCCTCCACTGCTCCCTCAAGCACAGCTCAAGCCTaGGGGACCACACCCACCTGTGCATCAGCATGGCCA +
Preference number: 6 (lower is better)
Translates to: QPSTAPSSTAQA*GTTPTCASAWP
Trigger: TGGCCATGCTGATGCACAGGTGGGTGTGGTCCCTCAGGCTTGAGCTGTGCTTGAGGGAGCAGTGGAGGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616136.1
CDS TCA 72 bp CACTGCTCCCTGAATAGTCGGGCTGGTGGGGCACCCTaGCACCCTTGTCACACCTGCACGGGGCTGCTACTT +
Preference number: 6 (lower is better)
Translates to: HCSLNSRAGGAP*HPCHTCTGLLL
Trigger: AAGTAGCAGCCCCGTGCAGGTGTGACAAGGGTGTCAGGGTGCCCCACCAGCCCGACTATTCAGGGAGCAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616136.1
CDS GCA 72 bp CTTAAACAGGTCCGTCTCTACTGTGCTTCCGGCCCCTaGTACCAGGCTCCCTGCGAGGGCTTGCTGCTCGTC +
Preference number: 6 (lower is better)
Translates to: LKQVRLYCASGP*YQAPCEGLLLV
Trigger: GACGAGCAGCAAGCCCTCGCAGGGAGCCTGGTAGCAGGGGCCGGAAGCACAGTAGAGACGGACCTGTTTAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS GCA 72 bp GTGGTCTGCCGCAGCTGCTGGAAGTACGGCGCAGCGTaGTCTCTCAGGCCCTGCCTCAAGATCCTCATTCTG +
Preference number: 6 (lower is better)
Translates to: VVCRSCWKYGAA*SLRPCLKILIL
Trigger: CAGAATGAGGATCTTGAGGCAGGGCCTGAGAGAGCACGCTGCGCCGTACTTCCAGCAGCTGCGGCAGACCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389561.7
ENST00000611841.1
CDS GCA 72 bp TGTCACAGAAGTGACCGCTCGAACACCCTGAGTCGTTaGCATGGACACCAGGTCAGGGGTCGCCGTGGCTGG +
Preference number: 6 (lower is better)
Translates to: CHRSDRSNTLSR*HGHQVRGRRGW
Trigger: CCAGCCACGGCGACCCCTGACCTGGTGTCCATGGCAACGACTCAGGGTGTTCGAGCGGTCACTTCTGTGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS GCA 72 bp GGGCCACCTGTGTGTCCTATCAGCACCGTCATGGCGTaGACCCAGAACACAAGAGAGGCTCCAGCGTGGGCA +
Preference number: 6 (lower is better)
Translates to: GPPVCPISTVMA*TQNTREAPAWA
Trigger: TGCCCACGCTGGAGCCTCTCTTGTGTTCTGGGTGCACGCCATGACGGTGCTGATAGGACACACAGGTGGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611118.1
CDS GCA 72 bp CACCTGAGAGCAGCTTCAGAGACCGCCACCTGCCCATaGCTACGGCTTACATGCACAGCGCCCTCTGCTCCA +
Preference number: 6 (lower is better)
Translates to: HLRAASETATCP*LRLTCTAPSAP
Trigger: TGGAGCAGAGGGCGCTGTGCATGTAAGCCGTAGGCATGGGCAGGTGGCGGTCTCTGAAGCTGCTCTCAGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611739.4
CDS GCA 72 bp AGACACCCTGCGCCTCCCGGCTTTGTGTCCCCTCAGTaGTCACTCCCTCTCCCTCTGGGTTCCAAAGGACAG +
Preference number: 6 (lower is better)
Translates to: RHPAPPGFVSPQ*SLPLPLGSKGQ
Trigger: CTGTCCTTTGGAACCCAGAGGGAGAGGGAGTGAGCACTGAGGGGACACAAAGCCGGGAGGCGCAGGGTGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616136.1
CDS GCA 72 bp CCGACCCAAAGGACATGCACTTCCCTGCAGCGGTCGTaGCAAGTGGGGATGCAGGCTGGTCTTTGGAACCCG +
Preference number: 6 (lower is better)
Translates to: PTQRTCTSLQRS*QVGMQAGLWNP
Trigger: CGGGTTCCAAAGACCAGCCTGCATCCCCACTTGGCACGACCGCTGCAGGGAAGTGCATGTCCTTTGGGTCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616136.1
CDS CCA 72 bp CCTCCTGGGTCGGCCCTCCAATGGGAGAAGCTGGTTTaGAGGCCGTTCCGGGTTCTCCTACAGCCAAGGCAT +
Preference number: 6 (lower is better)
Translates to: PPGSALQWEKLV*RPFRVLLQPRH
Trigger: ATGCCTTGGCTGTAGGAGAACCCGGAACGGCCTCCAAACCAGCTTCTCCCATTGGAGGGCCGACCCAGGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS CCA 72 bp AAAGGACATGCACTTCCCTGCAGCGGTCGTGCCAAGTaGGGATGCAGGCTGGTCTTTGGAACCCGGCCACGG +
Preference number: 6 (lower is better)
Translates to: KGHALPCSGRAK*GCRLVFGTRPR
Trigger: CCGTGGCCGGGTTCCAAAGACCAGCCTGCATCCCCACTTGGCACGACCGCTGCAGGGAAGTGCATGTCCTTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616136.1
CDS CCA 72 bp TGCGCGCCAGGGGTGGTGATCTGCTGTGCGGTGATCTaGGGAGAGACTGCGAAATTAGGGCCGCAGAGACCA +
Preference number: 6 (lower is better)
Translates to: CAPGVVICCAVI*GETAKLGPQRP
Trigger: TGGTCTCTGCGGCCCTAATTTCGCAGTCTCTCCCCAGATCACCGCACAGCAGATCACCACCCCTGGCGCGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616136.1
CDS CAA 72 bp TGCTGGGGACTGGGCCTGGCCCTGGATCTGTGGAACTaGCACCTGAGAGGTCGTCGTCGTCTGTTGCTGCTG +
Preference number: 6 (lower is better)
Translates to: CWGLGLALDLWN*HLRGRRRLLLL
Trigger: CAGCAGCAACAGACGACGACGACCTCTCAGGTGCAAGTTCCACAGATCCAGGGCCAGGCCCAGTCCCCAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330386.7
ENST00000389561.7
CDS CAA 72 bp TCCTCCTGGGTCGGCCCTCCAATGGGAGAAGCTGGTTaGGAGGCCGTTCCGGGTTCTCCTACAGCCAAGGCA +
Preference number: 6 (lower is better)
Translates to: SSWVGPPMGEAG*EAVPGSPTAKA
Trigger: TGCCTTGGCTGTAGGAGAACCCGGAACGGCCTCCAAACCAGCTTCTCCCATTGGAGGGCCGACCCAGGAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS CAA 72 bp CTGAGAGGTCGTCGTCGTCTGTTGCTGCTGCTGCTGTaGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTG +
Preference number: 6 (lower is better)
Translates to: LRGRRRLLLLLL*LLLLLLLLLLL
Trigger: CAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAACAGACGACGACGACCTCTCAG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS CAA 72 bp GACAGCTCTGCTTCCAGCTCCCCACAGAGCATGCCATaGCTGCACACCAGCAGGGCTTCACCCATAGGGCCC +
Preference number: 6 (lower is better)
Translates to: DSSASSSPQSMP*LHTSRASPIGP
Trigger: GGGCCCTATGGGTGAAGCCCTGCTGGTGTGCAGCAATGGCATGCTCTGTGGGGAGCTGGAAGCAGAGCTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616136.1
CDS CAA 90 bp CTGGTCTTTTCCTCCTGGGTCGGCCCTCCAATGGGAGAAGCTGGTTaGGAGGCCGTTCCGGGTTCTCCTACAGCCAAGGCATTCACCGCC +
Preference number: 6 (lower is better)
Translates to: LVFSSWVGPPMGEAG*EAVPGSPTAKAFTA
Trigger: GGCGGTGAATGCCTTGGCTGTAGGAGAACCCGGAACGGCCTCCAAACCAGCTTCTCCCATTGGAGGGCCGACCCAGGAGGAAAAGACCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS CAA 90 bp CTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGTTGTaGCTGCTGCTGCTGCTGCTGCCTGAGAAGCTGGAAATGTGCAGG +
Preference number: 6 (lower is better)
Translates to: LLLLLLLLLLLLLLL*LLLLLLPEKLEMCR
Trigger: CCTGCACATTTCCAGCTTCTCAGGCAGCAGCAGCAGCAGCAGCAACAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS CAA 90 bp AACTTGCACCTGAGAGGTCGTCGTCGTCTGTTGCTGCTGCTGCTGTaGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTG +
Preference number: 6 (lower is better)
Translates to: NLHLRGRRRLLLLLL*LLLLLLLLLLLLLL
Trigger: CAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAACAGACGACGACGACCTCTCAGGTGCAAGTT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS CAA 90 bp GCCCTGGATCTGTGGAACTTGCACCTGAGAGGTCGTCGTCGTCTGTaGCTGCTGCTGCTGTTGCTGCTGCTGCTGCTGCTGCTGCTGCTG +
Preference number: 6 (lower is better)
Translates to: ALDLWNLHLRGRRRL*LLLLLLLLLLLLLL
Trigger: CAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAACAGACGACGACGACCTCTCAGGTGCAAGTTCCACAGATCCAGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS CAA 90 bp GTTCCAAAGGACAGCTCTGCTTCCAGCTCCCCACAGAGCATGCCATaGCTGCACACCAGCAGGGCTTCACCCATAGGGCCCCTGGGCACT +
Preference number: 6 (lower is better)
Translates to: VPKDSSASSSPQSMP*LHTSRASPIGPLGT
Trigger: AGTGCCCAGGGGCCCTATGGGTGAAGCCCTGCTGGTGTGCAGCAATGGCATGCTCTGTGGGGAGCTGGAAGCAGAGCTGTCCTTTGGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616136.1
CDS TCA 72 bp GGTGGCTGGGCCACGGCCGGCTGCTGTGCCTTCTGCTaGTCAGCCAGAGCCTTTTTCTCTTTTGCGATTCGC +
Preference number: 6 (lower is better)
Translates to: GGWATAGCCAFC*SARAFFSFAIR
Trigger: GCGAATCGCAAAAGAGAAAAAGGCTCTGGCTGATCAGCAGAAGGCACAGCAGCCGGCCGTGGCCCAGCCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS GCA 72 bp ATCAGAGCCCGCCTTCTAGCTCTAGCCAGACAGCAGTaGCAACAGAACGTGGGGTCTGAGGGCCCACACCAG +
Preference number: 6 (lower is better)
Translates to: IRARLLALARQQ*QQNVGSEGPHQ
Trigger: CTGGTGTGGGCCCTCAGACCCCACGTTCTGTTGGCACTGCTGTCTGGCTAGAGCTAGAAGGCGGGCTCTGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616136.1
CDS GCA 72 bp AACACACAGCCCAGCACTTCAGCTGCAGCCCTCCACTaGTCCCTCAAGCACAGCTCAAGCCTGAGGGACCAC +
Preference number: 6 (lower is better)
Translates to: NTQPSTSAAALH*SLKHSSSLRDH
Trigger: GTGGTCCCTCAGGCTTGAGCTGTGCTTGAGGGAGCAGTGGAGGGCTGCAGCTGAAGTGCTGGGCTGTGTGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616136.1
CDS GCA 72 bp GGTGGTGATCTGCTGTGCGGTGATCTGGGGAGAGACTaGGAAATTAGGGCCGCAGAGACCATGCCGCGCTCA +
Preference number: 6 (lower is better)
Translates to: GGDLLCGDLGRD*EIRAAETMPRS
Trigger: TGAGCGCGGCATGGTCTCTGCGGCCCTAATTTCGCAGTCTCTCCCCAGATCACCGCACAGCAGATCACCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616136.1
CDS CCA 72 bp GCTCTGGGCCACCTGTGTGTCCTATCAGCACCGTCATaGCGTGCACCCAGAACACAAGAGAGGCTCCAGCGT +
Preference number: 6 (lower is better)
Translates to: ALGHLCVLSAPS*RAPRTQERLQR
Trigger: ACGCTGGAGCCTCTCTTGTGTTCTGGGTGCACGCCATGACGGTGCTGATAGGACACACAGGTGGCCCAGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611118.1
CDS CAA 72 bp CACCGGGATTTGGAGCTGTGTCTGGGCCTCTACCACTaGCGGCTGCTGTGCAAACTGCAGCGCAGAGGAGAG +
Preference number: 6 (lower is better)
Translates to: HRDLELCLGLYH*RLLCKLQRRGE
Trigger: CTCTCCTCTGCGCTGCAGTTTGCACAGCAGCCGCAAGTGGTAGAGGCCCAGACACAGCTCCAAATCCCGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332482.8
ENST00000333577.8
ENST00000389561.7
CDS CAA 72 bp ACTGCACAGGCTGAAACAACCTGCTGGCCTTCAGCTTaGCTGCTGCTGGTCGGGCTGCTGGGGCTGCTGAAG +
Preference number: 6 (lower is better)
Translates to: TAQAETTCWPSA*LLLVGLLGLLK
Trigger: CTTCAGCAGCCCCAGCAGCCCGACCAGCAGCAGCAAAGCTGAAGGCCAGCAGGTTGTTTCAGCCTGTGCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS CAA 90 bp TCTTCTGCTCCTTGCCCTCTCTGCGAATTTTCAGAAGTCCTGGTGTaGCGCGGTCAAACAGGGACCGAGGAGGGACGACCGCCTCCCCGT +
Preference number: 6 (lower is better)
Translates to: SSAPCPLCEFSEVLV*RGQTGTEEGRPPPR
Trigger: ACGGGGAGGCGGTCGTCCCTCCTCGGTCCCTGTTTGACCGCGCAACACCAGGACTTCTGAAAATTCGCAGAGAGGGCAAGGAGCAGAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389561.7
ENST00000611841.1
CDS TCA 72 bp AGATGCGCTGCAGCCGCACAAGGATGCTCAGGACGTTaGCAAAGTGCCCGCTCTTCAAGGCCTCCTGAGTGC +
Preference number: 6 (lower is better)
Translates to: RCAAAAQGCSGR*QSARSSRPPEC
Trigger: GCACTCAGGAGGCCTTGAAGAGCGGGCACTTTGTCAACGTCCTGAGCATCCTTGTGCGGCTGCAGCGCATCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS TCA 72 bp GTGCGACCCTCGGGCTTCTGGCCATACTGCACAGGCTaGAACAACCTGCTGGCCTTCAGCTTTGCTGCTGCT +
Preference number: 6 (lower is better)
Translates to: VRPSGFWPYCTG*NNLLAFSFAAA
Trigger: AGCAGCAGCAAAGCTGAAGGCCAGCAGGTTGTTTCAGCCTGTGCAGTATGGCCAGAAGCCCGAGGGTCGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS TCA 72 bp GCCACGCGGCTCTGTGGTCCTGTGATGGATGCCAGCTaGGCTATTTTCACTACCTCTCCACTGGGCAAGCGG +
Preference number: 6 (lower is better)
Translates to: ATRLCGPVMDAS*AIFTTSPLGKR
Trigger: CCGCTTGCCCAGTGGAGAGGTAGTGAAAATAGCTCAGCTGGCATCCATCACAGGACCACAGAGCCGCGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS TCA 72 bp GCCACTGTGCCACCAGGACGGGGGCCAGACTCAGGGTaGAGGAGCCTTCAGGACAATGACAATAGAGCGAAG +
Preference number: 6 (lower is better)
Translates to: ATVPPGRGPDSG*RSLQDNDNRAK
Trigger: CTTCGCTCTATTGTCATTGTCCTGAAGGCTCCTTCACCCTGAGTCTGGCCCCCGTCCTGGTGGCACAGTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611841.1
CDS TCA 72 bp CCACCACCTCGGGGACTAATTCAGACAGTCCAGGGCTaGTGGATCAATGGGGGTGGATTCCCTAGGCCGCAG +
Preference number: 6 (lower is better)
Translates to: PPPRGLIQTVQG*WINGGGFPRPQ
Trigger: CTGCGGCCTAGGGAATCCACCCCCATTGATCCATCAGCCCTGGACTGTCTGAATTAGTCCCCGAGGTGGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000611841.1
CDS TCA 72 bp CTAGAACACGTGATGGCACGCTCAAGTGGGTGGGTGTaGGGAAAGAACACGGGTCGCTGGCGACCACTGCCA +
Preference number: 6 (lower is better)
Translates to: LEHVMARSSGWV*GKNTGRWRPLP
Trigger: TGGCAGTGGTCGCCAGCGACCCGTGTTCTTTCCTCACACCCACCCACTTGAGCGTGCCATCACGTGTTCTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611739.4
CDS GCA 72 bp CTTAAACAGGTCCGTCTCTACTGTGCTTCCGGCCCCTaGTACCAGGCTCCCTGCGAGGGCTTGCTCGTCATT +
Preference number: 6 (lower is better)
Translates to: LKQVRLYCASGP*YQAPCEGLLVI
Trigger: AATGACGAGCAAGCCCTCGCAGGGAGCCTGGTAGCAGGGGCCGGAAGCACAGTAGAGACGGACCTGTTTAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332482.8
CDS GCA 72 bp ATTTGGAGCTGTGTCTGGGCCTCTACCACTTGCGGCTaGTGTGCAAACTGCAGCGCAGAGGAGAGGGCTGCA +
Preference number: 6 (lower is better)
Translates to: IWSCVWASTTCG*CANCSAEERAA
Trigger: TGCAGCCCTCTCCTCTGCGCTGCAGTTTGCACAGCAGCCGCAAGTGGTAGAGGCCCAGACACAGCTCCAAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332482.8
ENST00000333577.8
ENST00000389561.7
CDS GCA 72 bp CTTAAACAGGTCCGTCTCTACTGTGCTTCCGGCCCCTaGTACCAGGCTCCCTGCGAGGGCTTGCTGAAATGG +
Preference number: 6 (lower is better)
Translates to: LKQVRLYCASGP*YQAPCEGLLKW
Trigger: CCATTTCAGCAAGCCCTCGCAGGGAGCCTGGTAGCAGGGGCCGGAAGCACAGTAGAGACGGACCTGTTTAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333577.8
CDS GCA 72 bp GTGACCCACTTCAAGGCGAGGCCTCTTAGACTGCTCTaGCATACCTGTGGAGGGCATCGCCTGCTGCCTCTT +
Preference number: 6 (lower is better)
Translates to: VTHFKARPLRLL*HTCGGHRLLPL
Trigger: AAGAGGCAGCAGGCGATGCCCTCCACAGGTATGGCAGAGCAGTCTAAGAGGCCTCGCCTTGAAGTGGGTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333577.8
ENST00000389561.7
CDS GCA 72 bp CTCTACTGTGCTTCCGGCCCCTGCTACCAGGCTCCCTaGGAGGGCTTGCTGCTCGTCATTGATAACCTCAGA +
Preference number: 6 (lower is better)
Translates to: LYCASGPCYQAP*EGLLLVIDNLR
Trigger: TCTGAGGTTATCAATGACGAGCAGCAAGCCCTCGCAGGGAGCCTGGTAGCAGGGGCCGGAAGCACAGTAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS GCA 72 bp GCTTCCCAGTGCCTCTCGGTCATGCCCTTCACGCGCTaGATCTCATCAATGACCAGGCACTTCCAGCGCACT +
Preference number: 6 (lower is better)
Translates to: ASQCLSVMPFTR*ISSMTRHFQRT
Trigger: AGTGCGCTGGAAGTGCCTGGTCATTGATGAGATGCAGCGCGTGAAGGGCATGACCGAGAGGCACTGGGAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS GCA 72 bp TGCTGGAAGTACGGCGCAGCGTGCTCTCTCAGGCCCTaGCTCAAGATCCTCATTCTGTGGCTGTACAGGGGT +
Preference number: 6 (lower is better)
Translates to: CWKYGAACSLRP*LKILILWLYRG
Trigger: ACCCCTGTACAGCCACAGAATGAGGATCTTGAGGCAGGGCCTGAGAGAGCACGCTGCGCCGTACTTCCAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389561.7
ENST00000611841.1
CDS GCA 72 bp CTTGCCCTCTCTGCGAATTTTCAGAAGTCCTGGTGTTaGGCGGTCAAACAGGGACCGAGGAGGGACGACCGC +
Preference number: 6 (lower is better)
Translates to: LALSANFQKSWC*AVKQGPRRDDR
Trigger: GCGGTCGTCCCTCCTCGGTCCCTGTTTGACCGCGCAACACCAGGACTTCTGAAAATTCGCAGAGAGGGCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389561.7
ENST00000611841.1
CDS GCA 72 bp AGTGTCCAGGTGGTGTGGCACAAAGAACCCTGGGCCTaGTGGAGTCAGCCAGCTGCCTTTTACTGGCCCTGT +
Preference number: 6 (lower is better)
Translates to: SVQVVWHKEPWA*WSQPAAFYWPC
Trigger: ACAGGGCCAGTAAAAGGCAGCTGGCTGACTCCAGCAGGCCCAGGGTTCTTTGTGCCACACCACCTGGACACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616136.1
CDS CCA 72 bp TGTCACCGGCGTCTCTGGCTGAGCCACGCGGCTCTGTaGTCCTGTGATGGATGCCAGCTGAGCTATTTTCAC +
Preference number: 6 (lower is better)
Translates to: CHRRLWLSHAAL*SCDGCQLSYFH
Trigger: GTGAAAATAGCTCAGCTGGCATCCATCACAGGACCACAGAGCCGCGTGGCTCAGCCAGAGACGCCGGTGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS CCA 72 bp CTTTTCCTCCTGGGTCGGCCCTCCAATGGGAGAAGCTaGTTTGGAGGCCGTTCCGGGTTCTCCTACAGCCAA +
Preference number: 6 (lower is better)
Translates to: LFLLGRPSNGRS*FGGRSGFSYSQ
Trigger: TTGGCTGTAGGAGAACCCGGAACGGCCTCCAAACCAGCTTCTCCCATTGGAGGGCCGACCCAGGAGGAAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS CCA 72 bp AGAGTCTGGTCTTTTCCTCCTGGGTCGGCCCTCCAATaGGAGAAGCTGGTTTGGAGGCCGTTCCGGGTTCTC +
Preference number: 6 (lower is better)
Translates to: RVWSFPPGSALQ*EKLVWRPFRVL
Trigger: GAGAACCCGGAACGGCCTCCAAACCAGCTTCTCCCATTGGAGGGCCGACCCAGGAGGAAAAGACCAGACTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS CCA 72 bp CGCCAGGCGCTTGTTGATGGACTGGAAGGTGGCAGCTaGGACCCCTGCGATGGTGTTCACGATCACATTTCC +
Preference number: 6 (lower is better)
Translates to: RQALVDGLEGGS*DPCDGVHDHIS
Trigger: GGAAATGTGATCGTGAACACCATCGCAGGGGTCCCAGCTGCCACCTTCCAGTCCATCAACAAGCGCCTGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS CCA 72 bp GGGCAGGGGCCCAACGAGGCAGATCCTAACCAGTCCTaGCCAATAACCACCACCTCGGGGACTAATTCAGAC +
Preference number: 6 (lower is better)
Translates to: GQGPNEADPNQS*PITTTSGTNSD
Trigger: GTCTGAATTAGTCCCCGAGGTGGTGGTTATTGGCCAGGACTGGTTAGGATCTGCCTCGTTGGGCCCCTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611841.1
CDS CCA 72 bp GTCCAGGTGGTGTGGCACAAAGAACCCTGGGCCTGCTaGAGTCAGCCAGCTGCCTTTTACTGGCCCTGTGAT +
Preference number: 6 (lower is better)
Translates to: VQVVWHKEPWAC*SQPAAFYWPCD
Trigger: ATCACAGGGCCAGTAAAAGGCAGCTGGCTGACTCCAGCAGGCCCAGGGTTCTTTGTGCCACACCACCTGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616136.1
CDS CCA 72 bp ACAGCCAGTGTCCAGGTGGTGTGGCACAAAGAACCCTaGGCCTGCTGGAGTCAGCCAGCTGCCTTTTACTGG +
Preference number: 6 (lower is better)
Translates to: TASVQVVWHKEP*ACWSQPAAFYW
Trigger: CCAGTAAAAGGCAGCTGGCTGACTCCAGCAGGCCCAGGGTTCTTTGTGCCACACCACCTGGACACTGGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616136.1
CDS CAA 72 bp CCTTGCCCTCTCTGCGAATTTTCAGAAGTCCTGGTGTaGCGCGGTCAAACAGGGACCGAGGAGGGACGACCG +
Preference number: 6 (lower is better)
Translates to: PCPLCEFSEVLV*RGQTGTEEGRP
Trigger: CGGTCGTCCCTCCTCGGTCCCTGTTTGACCGCGCAACACCAGGACTTCTGAAAATTCGCAGAGAGGGCAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389561.7
ENST00000611841.1
CDS CAA 72 bp CTGTGGAACTTGCACCTGAGAGGTCGTCGTCGTCTGTaGCTGCTGCTGCTGTTGCTGCTGCTGCTGCTGCTG +
Preference number: 6 (lower is better)
Translates to: LWNLHLRGRRRL*LLLLLLLLLLL
Trigger: CAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAACAGACGACGACGACCTCTCAGGTGCAAGTTCCACAG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS CAA 90 bp CGGTGCAGGGATGGGAACATTGGGCTGCTGAGTCTTCACCGGGATTaGGAGCTGTGTCTGGGCCTCTACCACTTGCGGCTGCTGTGCAAA +
Preference number: 6 (lower is better)
Translates to: RCRDGNIGLLSLHRD*ELCLGLYHLRLLCK
Trigger: TTTGCACAGCAGCCGCAAGTGGTAGAGGCCCAGACACAGCTCCAAATCCCGGTGAAGACTCAGCAGCCCAATGTTCCCATCCCTGCACCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332482.8
ENST00000333577.8
ENST00000389561.7
CDS CAA 90 bp CCGGCCCCTGCTACCAGGCTCCCTGCGAGGGCTTGCTGCTCGTCATaGATAACCTCAGATTTTTCTTCCTCCTCTTCCTCCTCCTCCTCC +
Preference number: 6 (lower is better)
Translates to: PAPATRLPARACCSS*ITSDFSSSSSSSSS
Trigger: GGAGGAGGAGGAGGAAGAGGAGGAAGAAAAATCTGAGGTTATCAATGACGAGCAGCAAGCCCTCGCAGGGAGCCTGGTAGCAGGGGCCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS CAA 90 bp CCTGGGACCAGGAAGTGCACCATGGTCCAGAGCTCCAGGAAGGTATaGTGCAGCGGCGAGTCGATCAGAAGCAGACGTTGTTGGCTCTGC +
Preference number: 6 (lower is better)
Translates to: PGTRKCTMVQSSRKV*CSGESIRSRRCWLC
Trigger: GCAGAGCCAACAACGTCTGCTTCTGATCGACTCGCCGCTGCACAATACCTTCCTGGAGCTCTGGACCATGGTGCACTTCCTGGTCCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS CAA 90 bp CTTCCGGCCCCTGCTACCAGGCTCCCTGCGAGGGCTTGCTCGTCATaGATAACCTCAGATTTTTCTTCCTCCTCTTCCTCCTCCTCCTCC +
Preference number: 6 (lower is better)
Translates to: LPAPATRLPARACSS*ITSDFSSSSSSSSS
Trigger: GGAGGAGGAGGAGGAAGAGGAGGAAGAAAAATCTGAGGTTATCAATGACGAGCAAGCCCTCGCAGGGAGCCTGGTAGCAGGGGCCGGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000332482.8
CDS CAA 90 bp GCCACCACCCCTGGGGTCCGGGAAGTGACTGGAGATAGTGCCTTATaGGTGGCTGAGGAAGGTCTATTTACTGGAGAGGATCGAGCAGGG +
Preference number: 6 (lower is better)
Translates to: ATTPGVREVTGDSAL*VAEEGLFTGEDRAG
Trigger: CCCTGCTCGATCCTCTCCAGTAAATAGACCTTCCTCAGCCACCAATAAGGCACTATCTCCAGTCACTTCCCGGACCCCAGGGGTGGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000332482.8
ENST00000333577.8
ENST00000389561.7
CDS CAA 90 bp TCTGGCCATACTGCACAGGCTGAAACAACCTGCTGGCCTTCAGCTTaGCTGCTGCTGGTCGGGCTGCTGGGGCTGCTGAAGTGGAGATTT +
Preference number: 6 (lower is better)
Translates to: SGHTAQAETTCWPSA*LLLVGLLGLLKWRF
Trigger: AAATCTCCACTTCAGCAGCCCCAGCAGCCCGACCAGCAGCAGCAAAGCTGAAGGCCAGCAGGTTGTTTCAGCCTGTGCAGTATGGCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS CAA 90 bp ACCGGAGGAATCACAAAGGCCACCCTGAGGAGCAGAAAGCATGTTTaGTCACCACCAGGAGCCACACACCTTCACCCAGCATGGGGGCTC +
Preference number: 6 (lower is better)
Translates to: TGGITKATLRSRKHV*SPPGATHLHPAWGL
Trigger: GAGCCCCCATGCTGGGTGAAGGTGTGTGGCTCCTGGTGGTGACAAAACATGCTTTCTGCTCCTCAGGGTGGCCTTTGTGATTCCTCCGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611841.1
CDS TCA 72 bp GCGTCTCTGGCTGAGCCACGCGGCTCTGTGGTCCTGTaGTGGATGCCAGCTGAGCTATTTTCACTACCTCTC +
Preference number: 6 (lower is better)
Translates to: ASLAEPRGSVVL*WMPAELFSLPL
Trigger: GAGAGGTAGTGAAAATAGCTCAGCTGGCATCCATCACAGGACCACAGAGCCGCGTGGCTCAGCCAGAGACGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS TCA 72 bp GCCCAGTCCTCACTGATGAGCCACTCGGGGTTGTCTTaGCCAGGCTCAGCTGTGGGTTTGGCAAAAGTTGGC +
Preference number: 6 (lower is better)
Translates to: AQSSLMSHSGLS*PGSAVGLAKVG
Trigger: GCCAACTTTTGCCAAACCCACAGCTGAGCCTGGTCAAGACAACCCCGAGTGGCTCATCAGTGAGGACTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389561.7
ENST00000611841.1
CDS GCA 72 bp GACTGCTCTGCCATACCTGTGGAGGGCATCGCCTGCTaGCTCTTAAACAGGTCCGTCTCTACTGTGCTTCCG +
Preference number: 6 (lower is better)
Translates to: DCSAIPVEGIAC*LLNRSVSTVLP
Trigger: CGGAAGCACAGTAGAGACGGACCTGTTTAAGAGGCAGCAGGCGATGCCCTCCACAGGTATGGCAGAGCAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333577.8
ENST00000389561.7
CDS GCA 72 bp TGGCTGAGCCACGCGGCTCTGTGGTCCTGTGATGGATaGCAGCTGAGCTATTTTCACTACCTCTCCACTGGG +
Preference number: 6 (lower is better)
Translates to: WLSHAALWSCDG*QLSYFHYLSTG
Trigger: CCCAGTGGAGAGGTAGTGAAAATAGCTCAGCTGGCATCCATCACAGGACCACAGAGCCGCGTGGCTCAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS GCA 72 bp TGCTGCTGCTGCTGCTGCTGCTGTTGTTGCTGCTGCTaGTGCTGCTGCCTGAGAAGCTGGAAATGTGCAGGT +
Preference number: 6 (lower is better)
Translates to: CCCCCCCCCCCC*CCCLRSWKCAG
Trigger: ACCTGCACATTTCCAGCTTCTCAGGCAGCAGCAGCAGCAGCAGCAACAACAGCAGCAGCAGCAGCAGCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS GCA 72 bp TGCTGCTGCTGCTGCTGCTGCTGCTGTTGTTGCTGCTaGTGCTGCTGCTGCCTGAGAAGCTGGAAATGTGCA +
Preference number: 6 (lower is better)
Translates to: CCCCCCCCCCCC*CCCCLRSWKCA
Trigger: TGCACATTTCCAGCTTCTCAGGCAGCAGCAGCAGCAGCAGCAACAACAGCAGCAGCAGCAGCAGCAGCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS GCA 72 bp TGCTGCTGCTGCTGCTGCTGCTGCTGCTGTTGTTGCTaGTGCTGCTGCTGCTGCCTGAGAAGCTGGAAATGT +
Preference number: 6 (lower is better)
Translates to: CCCCCCCCCCCC*CCCCCLRSWKC
Trigger: ACATTTCCAGCTTCTCAGGCAGCAGCAGCAGCAGCAGCAACAACAGCAGCAGCAGCAGCAGCAGCAGCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS GCA 72 bp AAGACAACATCCTCCGTCTTGAGGATAAGCACCAGGTaGCTGCAGGGGTCCAGCACAGCGCTCAGGGAACAG +
Preference number: 6 (lower is better)
Translates to: KTTSSVLRISTR*LQGSSTALREQ
Trigger: CTGTTCCCTGAGCGCTGTGCTGGACCCCTGCAGGCACCTGGTGCTTATCCTCAAGACGGAGGATGTTGTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616136.1
CDS CCA 72 bp CTGCTCCTTGCCCTCTCTGCGAATTTTCAGAAGTCCTaGTGTTGCGCGGTCAAACAGGGACCGAGGAGGGAC +
Preference number: 6 (lower is better)
Translates to: LLLALSANFQKS*CCAVKQGPRRD
Trigger: GTCCCTCCTCGGTCCCTGTTTGACCGCGCAACACCAGGACTTCTGAAAATTCGCAGAGAGGGCAAGGAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389561.7
ENST00000611841.1
CDS CCA 72 bp GTCTTGACCAGGCTCAGCTGTGGGTTTGGCAAAAGTTaGCAGGGGCTTGGCGAATGGCACCTGCTGCTTCAG +
Preference number: 6 (lower is better)
Translates to: VLTRLSCGFGKS*QGLGEWHLLLQ
Trigger: CTGAAGCAGCAGGTGCCATTCGCCAAGCCCCTGCCAACTTTTGCCAAACCCACAGCTGAGCCTGGTCAAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389561.7
ENST00000611841.1
CDS CCA 72 bp CACGTTTGTGCTAGAACACGTGATGGCACGCTCAAGTaGGTGGGTGTGAGGAAAGAACACGGGTCGCTGGCG +
Preference number: 6 (lower is better)
Translates to: HVCARTRDGTLK*VGVRKEHGSLA
Trigger: CGCCAGCGACCCGTGTTCTTTCCTCACACCCACCCACTTGAGCGTGCCATCACGTGTTCTAGCACAAACGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611739.4
CDS CAA 72 bp CCCGGTTGCAGGGCTCCTATTCATCAGCTGCTGTATTaGATAACTGGGAGACTGGGGTGCCGACGGGCTTGC +
Preference number: 6 (lower is better)
Translates to: PGCRAPIHQLLY*ITGRLGCRRAC
Trigger: GCAAGCCCGTCGGCACCCCAGTCTCCCAGTTATCAAATACAGCAGCTGATGAATAGGAGCCCTGCAACCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332482.8
ENST00000333577.8
ENST00000389561.7
CDS CAA 72 bp GATGGGAACATTGGGCTGCTGAGTCTTCACCGGGATTaGGAGCTGTGTCTGGGCCTCTACCACTTGCGGCTG +
Preference number: 6 (lower is better)
Translates to: DGNIGLLSLHRD*ELCLGLYHLRL
Trigger: CAGCCGCAAGTGGTAGAGGCCCAGACACAGCTCCAAATCCCGGTGAAGACTCAGCAGCCCAATGTTCCCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332482.8
ENST00000333577.8
ENST00000389561.7
CDS CAA 72 bp CGCCCAGTCCTCACTGATGAGCCACTCGGGGTTGTCTaGACCAGGCTCAGCTGTGGGTTTGGCAAAAGTTGG +
Preference number: 6 (lower is better)
Translates to: RPVLTDEPLGVV*TRLSCGFGKSW
Trigger: CCAACTTTTGCCAAACCCACAGCTGAGCCTGGTCAAGACAACCCCGAGTGGCTCATCAGTGAGGACTGGGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389561.7
ENST00000611841.1
CDS CAA 90 bp TTCGGCAGGATGGCTTCAGCCACCGCAGTGACGTCCGCAATGTCCTaGGCGTTTGGCTTCCCGATATTCATCCTCTCGGCAGCTTTGAAC +
Preference number: 6 (lower is better)
Translates to: FGRMASATAVTSAMS*AFGFPIFILSAALN
Trigger: GTTCAAAGCTGCCGAGAGGATGAATATCGGGAAGCCAAACGCCAAGGACATTGCGGACGTCACTGCGGTGGCTGAAGCCATCCTGCCGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS TCA 72 bp GTGCTGCCACCACCGGAGGAATCACAAAGGCCACCCTaGGGAGCAGAAAGCATGTTTTGTCACCACCAGGAG +
Preference number: 6 (lower is better)
Translates to: VLPPPEESQRPP*GAESMFCHHQE
Trigger: CTCCTGGTGGTGACAAAACATGCTTTCTGCTCCTCAGGGTGGCCTTTGTGATTCCTCCGGTGGTGGCAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611841.1
CDS TCA 72 bp CTGTGCACTTGCTACTGCATGCATCTCCCGCTGTCTTaGCGTAGTAAGAGGCTCTGGGCCACCTGTGTGTCC +
Preference number: 6 (lower is better)
Translates to: LCTCYCMHLPLS*RSKRLWATCVS
Trigger: GGACACACAGGTGGCCCAGAGCCTCTTACTACGTCAAGACAGCGGGAGATGCATGCAGTAGCAAGTGCACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611118.1
CDS GCA 72 bp CTCTACTGTGCTTCCGGCCCCTGCTACCAGGCTCCCTaGGAGGGCTTGCTCGTCATTGATAACCTCAGATTT +
Preference number: 6 (lower is better)
Translates to: LYCASGPCYQAP*EGLLVIDNLRF
Trigger: AAATCTGAGGTTATCAATGACGAGCAAGCCCTCGCAGGGAGCCTGGTAGCAGGGGCCGGAAGCACAGTAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332482.8
CDS GCA 72 bp ATTCCTCCTGCCATACCTGTGGAGGGCATCGCCTGCTaGCTCTTAAACAGGTCCGTCTCTACTGTGCTTCCG +
Preference number: 6 (lower is better)
Translates to: IPPAIPVEGIAC*LLNRSVSTVLP
Trigger: CGGAAGCACAGTAGAGACGGACCTGTTTAAGAGGCAGCAGGCGATGCCCTCCACAGGTATGGCAGGAGGAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332482.8
CDS GCA 72 bp GGCATTCCTCCTGCCATACCTGTGGAGGGCATCGCCTaGTGCCTCTTAAACAGGTCCGTCTCTACTGTGCTT +
Preference number: 6 (lower is better)
Translates to: GIPPAIPVEGIA*CLLNRSVSTVL
Trigger: AAGCACAGTAGAGACGGACCTGTTTAAGAGGCAGCAGGCGATGCCCTCCACAGGTATGGCAGGAGGAATGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332482.8
CDS GCA 72 bp ATCAGCCAGAGCCTTTTTCTCTTTTGCGATTCGCTCTaGACGGAGAGATGCCACCTGGATGGGAGGCAGCGG +
Preference number: 6 (lower is better)
Translates to: ISQSLFLFCDSL*TERCHLDGRQR
Trigger: CCGCTGCCTCCCATCCAGGTGGCATCTCTCCGTGCAGAGCGAATCGCAAAAGAGAAAAAGGCTCTGGCTGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS GCA 72 bp CTGAAGCTCCCGCAAGACCTGCAGGCTCATCACACATaGTGCTGCGTTCAGATGTCAGTGATCTCACGGGAC +
Preference number: 6 (lower is better)
Translates to: LKLPQDLQAHHT*CCVQMSVISRD
Trigger: GTCCCGTGAGATCACTGACATCTGAACGCAGCAGCATGTGTGATGAGCCTGCAGGTCTTGCGGGAGCTTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611739.4
CDS CCA 72 bp CAGGGCTCCTATTCATCAGCTGCTGTATTTGATAACTaGGAGACTGGGGTGCCGACGGGCTTGCTGAGGGAG +
Preference number: 6 (lower is better)
Translates to: QGSYSSAAVFDN*ETGVPTGLLRE
Trigger: CTCCCTCAGCAAGCCCGTCGGCACCCCAGTCTCCCAGTTATCAAATACAGCAGCTGATGAATAGGAGCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332482.8
ENST00000333577.8
ENST00000389561.7
CDS CCA 72 bp CAATATTCGACCAAAAGCACTCTATCTCCCGGGCCGTaGAGGCGGCTATCCGCCTCAGTCTGCTCTGCTCTT +
Preference number: 6 (lower is better)
Translates to: QYSTKSTLSPGP*RRLSASVCSAL
Trigger: AAGAGCAGAGCAGACTGAGGCGGATAGCCGCCTCCACGGCCCGGGAGATAGAGTGCTTTTGGTCGAATATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000332482.8
ENST00000333577.8
ENST00000389561.7
CDS CCA 72 bp CACACACCTTCACCCAGCATGGGGGCTCCTGAAAGATaGGGCAGACTTCTGACAGTCCAAGTCCCAGGAAAC +
Preference number: 6 (lower is better)
Translates to: HTPSPSMGAPER*GRLLTVQVPGN
Trigger: GTTTCCTGGGACTTGGACTGTCAGAAGTCTGCCCCATCTTTCAGGAGCCCCCATGCTGGGTGAAGGTGTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611841.1
CDS CAA 72 bp ATGGCTTCAGCCACCGCAGTGACGTCCGCAATGTCCTaGGCGTTTGGCTTCCCGATATTCATCCTCTCGGCA +
Preference number: 6 (lower is better)
Translates to: MASATAVTSAMS*AFGFPIFILSA
Trigger: TGCCGAGAGGATGAATATCGGGAAGCCAAACGCCAAGGACATTGCGGACGTCACTGCGGTGGCTGAAGCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS CAA 72 bp TGTCTTGACCAGGCTCAGCTGTGGGTTTGGCAAAAGTaGGCAGGGGCTTGGCGAATGGCACCTGCTGCTTCA +
Preference number: 6 (lower is better)
Translates to: CLDQAQLWVWQK*AGAWRMAPAAS
Trigger: TGAAGCAGCAGGTGCCATTCGCCAAGCCCCTGCCAACTTTTGCCAAACCCACAGCTGAGCCTGGTCAAGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389561.7
ENST00000611841.1
CDS CAA 90 bp CCTGCAGAGACTCTCCACACCGACAAAGCGTCAACATCAGCTCACTaGGACTTTCTGAGGATGAAGTGTAACTGTGCGCTGGCCCGGCCT +
Preference number: 6 (lower is better)
Translates to: PAETLHTDKASTSAH*DFLRMKCNCALARP
Trigger: AGGCCGGGCCAGCGCACAGTTACACTTCATCCTCAGAAAGTCCAAGTGAGCTGATGTTGACGCTTTGTCGGTGTGGAGAGTCTCTGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS TCA 72 bp TCTCTCCTGCAGGTTCTGCGCACTGCCACGTCCAGCTaGTGCCTGAACACGCTAAGTGCACAACGATTTGCT +
Preference number: 6 (lower is better)
Translates to: SLLQVLRTATSS*CLNTLSAQRFA
Trigger: AGCAAATCGTTGTGCACTTAGCGTGTTCAGGCATCAGCTGGACGTGGCAGTGCGCAGAACCTGCAGGAGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611841.1
CDS TCA 72 bp TCCCAGACAGCACTTGCGCCTGATGCTAGTCCCTTCTaGAATCTCCAAATGCTCTCCCTGCCTACAGCGGTC +
Preference number: 6 (lower is better)
Translates to: SQTALAPDASPF*NLQMLSLPTAV
Trigger: GACCGCTGTAGGCAGGGAGAGCATTTGGAGATTTCAGAAGGGACTAGCATCAGGCGCAAGTGCTGTCTGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611739.4
CDS GCA 72 bp AAGTGCACCATGGTCCAGAGCTCCAGGAAGGTATTGTaGAGCGGCGAGTCGATCAGAAGCAGACGTTGTTGG +
Preference number: 6 (lower is better)
Translates to: KCTMVQSSRKVL*SGESIRSRRCW
Trigger: CCAACAACGTCTGCTTCTGATCGACTCGCCGCTGCACAATACCTTCCTGGAGCTCTGGACCATGGTGCACTT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS GCA 72 bp AAGCTCCCGCAAGACCTGCAGGCTCATCACACATGCTaGTGCGTTCAGATGTCAGTGATCTCACGGGACATC +
Preference number: 6 (lower is better)
Translates to: KLPQDLQAHHTC*CVQMSVISRDI
Trigger: GATGTCCCGTGAGATCACTGACATCTGAACGCAGCAGCATGTGTGATGAGCCTGCAGGTCTTGCGGGAGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611739.4
CDS CCA 72 bp GCTTTAGATGAGAGGCAGCCCTGCTGCCCTGACTACTaGCACGGAGGCTTAGTAGGTGTCTTTAGCCTGACA +
Preference number: 6 (lower is better)
Translates to: ALDERQPCCPDY*HGGLVGVFSLT
Trigger: TGTCAGGCTAAAGACACCTACTAAGCCTCCGTGCCAGTAGTCAGGGCAGCAGGGCTGCCTCTCATCTAAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330386.7
ENST00000389561.7
ENST00000611118.1
ENST00000611739.4
ENST00000616136.1
CDS CCA 72 bp AGCCACCGCAGTGACGTCCGCAATGTCCTTGGCGTTTaGCTTCCCGATATTCATCCTCTCGGCAGCTTTGAA +
Preference number: 6 (lower is better)
Translates to: SHRSDVRNVLGV*LPDIHPLGSFE
Trigger: TTCAAAGCTGCCGAGAGGATGAATATCGGGAAGCCAAACGCCAAGGACATTGCGGACGTCACTGCGGTGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS CAA 72 bp AGGAAGTGCACCATGGTCCAGAGCTCCAGGAAGGTATaGTGCAGCGGCGAGTCGATCAGAAGCAGACGTTGT +
Preference number: 6 (lower is better)
Translates to: RKCTMVQSSRKV*CSGESIRSRRC
Trigger: ACAACGTCTGCTTCTGATCGACTCGCCGCTGCACAATACCTTCCTGGAGCTCTGGACCATGGTGCACTTCCT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS CAA 72 bp CCCTCCCTGCACAAGGCCCTCACGGACCCTGGTCTCTaGCTGGGTCCTGTTACTTACAGAAAACGGATGAAA +
Preference number: 6 (lower is better)
Translates to: PSLHKALTDPGL*LGPVTYRKRMK
Trigger: TTTCATCCGTTTTCTGTAAGTAACAGGACCCAGCAAGAGACCAGGGTCCGTGAGGGCCTTGTGCAGGGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611118.1
CDS TCA 72 bp ACTCACGGCACCAGTGGGCATGCTCGTCCCAGTAACTaGTGTTTTAATGGTTCCTGCCAGTACGGCTGCACT +
Preference number: 6 (lower is better)
Translates to: THGTSGHARPSN*CFNGSCQYGCT
Trigger: AGTGCAGCCGTACTGGCAGGAACCATTAAAACATCAGTTACTGGGACGAGCATGCCCACTGGTGCCGTGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS TCA 72 bp GGCACACTCATCACATCTGTCAGCGTCTTTCCCCACTaGGGGCCAGCAAGGACAATCCCTGTAACACAGAGA +
Preference number: 6 (lower is better)
Translates to: GTLITSVSVFPH*GPARTIPVTQR
Trigger: TCTCTGTGTTACAGGGATTGTCCTTGCTGGCCCTCAGTGGGGAAAGACGCTGACAGATGTGATGAGTGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611841.1
CDS TCA 72 bp TCTCACGGGACATCACCTTCACTTCCCTCCATCTCCTaGACCAGTAACCGCATCCTGTCCCGTTTTTCCCAC +
Preference number: 6 (lower is better)
Translates to: SHGTSPSLPSIS*TSNRILSRFSH
Trigger: GTGGGAAAAACGGGACAGGATGCGGTTACTGGTTCAGGAGATGGAGGGAAGTGAAGGTGATGTCCCGTGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611739.4
CDS TCA 72 bp CTGCTGGAGTCAGCCAGCTGCCTTTTACTGGCCCTGTaGTCTGGGCAAGTCCTTTTCTCTGAGCCTCAGTTT +
Preference number: 6 (lower is better)
Translates to: LLESASCLLLAL*SGQVLFSEPQF
Trigger: AAACTGAGGCTCAGAGAAAAGGACTTGCCCAGATCACAGGGCCAGTAAAAGGCAGCTGGCTGACTCCAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616136.1
CDS GCA 72 bp TTAGACTGCTCTGCCATACCTGTGGAGGGCATCGCCTaGTGCCTCTTAAACAGGTCCGTCTCTACTGTGCTT +
Preference number: 6 (lower is better)
Translates to: LDCSAIPVEGIA*CLLNRSVSTVL
Trigger: AAGCACAGTAGAGACGGACCTGTTTAAGAGGCAGCAGGCGATGCCCTCCACAGGTATGGCAGAGCAGTCTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333577.8
ENST00000389561.7
CDS GCA 72 bp GAGGAAGGTAGTTTTGCTTTAGATGAGAGGCAGCCCTaGTGCCCTGACTACTGGCACGGAGGCTTAGTAGGT +
Preference number: 6 (lower is better)
Translates to: EEGSFALDERQP*CPDYWHGGLVG
Trigger: ACCTACTAAGCCTCCGTGCCAGTAGTCAGGGCAGCAGGGCTGCCTCTCATCTAAAGCAAAACTACCTTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330386.7
ENST00000389561.7
ENST00000611118.1
ENST00000611739.4
ENST00000616136.1
CDS GCA 72 bp CAGGGTCTTCAGGTTCCAGAACTCCCATGCCCTCACTaGAGTCATCACTGCGTCCTCACTGTTTCTCTCCTT +
Preference number: 6 (lower is better)
Translates to: QGLQVPELPCPH*SHHCVLTVSLL
Trigger: AAGGAGAGAAACAGTGAGGACGCAGTGATGACTGCAGTGAGGGCATGGGAGTTCTGGAACCTGAAGACCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389561.7
ENST00000611841.1
CDS GCA 72 bp GCAAAAGTTGGCAGGGGCTTGGCGAATGGCACCTGCTaGTTCAGCAGAATATTCTTCTTCTGCTCCTTGCCC +
Preference number: 6 (lower is better)
Translates to: AKVGRGLANGTC*FSRIFFFCSLP
Trigger: GGGCAAGGAGCAGAAGAAGAATATTCTGCTGAAGCAGCAGGTGCCATTCGCCAAGCCCCTGCCAACTTTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389561.7
ENST00000611841.1
CDS GCA 72 bp AACCTAAGGCCCACCTTGCAACCTGTGGAGGTCACCTaGACCAGAAGGCCCTTGCTATGGACATCAACTATG +
Preference number: 6 (lower is better)
Translates to: NLRPTLQPVEVT*TRRPLLWTSTM
Trigger: CATAGTTGATGTCCATAGCAAGGGCCTTCTGGTGCAGGTGACCTCCACAGGTTGCAAGGTGGGCCTTAGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611841.1
CDS GCA 72 bp CACCCAGTGCCCACTTTCTGTGCACTTGCTACTGCATaGATCTCCCGCTGTCTTGACGTAGTAAGAGGCTCT +
Preference number: 6 (lower is better)
Translates to: HPVPTFCALATA*ISRCLDVVRGS
Trigger: AGAGCCTCTTACTACGTCAAGACAGCGGGAGATGCATGCAGTAGCAAGTGCACAGAAAGTGGGCACTGGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611118.1
CDS GCA 72 bp GTGACACAGAAGAGCAATTCTCGTAGTGTGCCCACCTaGAGCAGTGAGAGAGCAAGTCGTTCCACTGCATGG +
Preference number: 6 (lower is better)
Translates to: VTQKSNSRSVPT*SSERASRSTAW
Trigger: CCATGCAGTGGAACGACTTGCTCTCTCACTGCTGCAGGTGGGCACACTACGAGAATTGCTCTTCTGTGTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611118.1
CDS CCA 72 bp TGGGATGAAAAAGCAGCAGAAACCTTTGGCGGAAGCTaGGTTGCTATAGCAACGGGAGTCCCAGTCTGCCCA +
Preference number: 6 (lower is better)
Translates to: WDEKAAETFGGS*VAIATGVPVCP
Trigger: TGGGCAGACTGGGACTCCCGTTGCTATAGCAACCCAGCTTCCGCCAAAGGTTTCTGCTGCTTTTTCATCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333577.8
CDS CCA 72 bp TGTTGTTGCTGCTGCTGCTGCTGCTGCCTGAGAAGCTaGAAATGTGCAGGTGTGATGGTTTTTCCAGGGAGC +
Preference number: 6 (lower is better)
Translates to: CCCCCCCCCLRS*KCAGVMVFPGS
Trigger: GCTCCCTGGAAAAACCATCACACCTGCACATTTCCAGCTTCTCAGGCAGCAGCAGCAGCAGCAGCAACAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS CAA 72 bp TTGCAACCTGTGGAGGTCACCTGCACCAGAAGGCCCTaGCTATGGACATCAACTATGACTCACTCCCAGCTG +
Preference number: 6 (lower is better)
Translates to: LQPVEVTCTRRP*LWTSTMTHSQL
Trigger: CAGCTGGGAGTGAGTCATAGTTGATGTCCATAGCAAGGGCCTTCTGGTGCAGGTGACCTCCACAGGTTGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611841.1
CDS CAA 90 bp AGGCCCACCTTGCAACCTGTGGAGGTCACCTGCACCAGAAGGCCCTaGCTATGGACATCAACTATGACTCACTCCCAGCTGTATTCAAAC +
Preference number: 6 (lower is better)
Translates to: RPTLQPVEVTCTRRP*LWTSTMTHSQLYSN
Trigger: GTTTGAATACAGCTGGGAGTGAGTCATAGTTGATGTCCATAGCAAGGGCCTTCTGGTGCAGGTGACCTCCACAGGTTGCAAGGTGGGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611841.1
CDS TCA 72 bp GCACCTGGGTCCCCAAATCCTAGCTTGAGTTGCAGCTaGTTGGTTGTGGGATTTGGGTGGGAACTTAGCCTA +
Preference number: 6 (lower is better)
Translates to: APGSPNPSLSCS*LVVGFGWELSL
Trigger: TAGGCTAAGTTCCCACCCAAATCCCACAACCAATCAGCTGCAACTCAAGCTAGGATTTGGGGACCCAGGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611739.4
CDS TCA 72 bp AGGCTCATCACACATGCTGCTGCGTTCAGATGTCAGTaGTCTCACGGGACATCACCTTCACTTCCCTCCATC +
Preference number: 6 (lower is better)
Translates to: RLITHAAAFRCQ*SHGTSPSLPSI
Trigger: GATGGAGGGAAGTGAAGGTGATGTCCCGTGAGATCACTGACATCTGAACGCAGCAGCATGTGTGATGAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611739.4
CDS GCA 72 bp CACGCTCTGCAGGGTGATGTTCACGTTCTGCCCGGTTaGAGGGCTCCTATTCATCAGCTGCTGTATTTGATA +
Preference number: 6 (lower is better)
Translates to: HALQGDVHVLPG*RAPIHQLLYLI
Trigger: TATCAAATACAGCAGCTGATGAATAGGAGCCCTGCAACCGGGCAGAACGTGAACATCACCCTGCAGAGCGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000332482.8
ENST00000333577.8
ENST00000389561.7
CDS GCA 72 bp CTTTTTCTCTTTTGCGATTCGCTCTGCACGGAGAGATaGCACCTGGATGGGAGGCAGCGGCTTGTCATAGTT +
Preference number: 6 (lower is better)
Translates to: LFLFCDSLCTER*HLDGRQRLVIV
Trigger: AACTATGACAAGCCGCTGCCTCCCATCCAGGTGGCATCTCTCCGTGCAGAGCGAATCGCAAAAGAGAAAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS CCA 72 bp CCTGTGGAGGTCACCTGCACCAGAAGGCCCTTGCTATaGACATCAACTATGACTCACTCCCAGCTGTATTCA +
Preference number: 6 (lower is better)
Translates to: PVEVTCTRRPLL*TSTMTHSQLYS
Trigger: TGAATACAGCTGGGAGTGAGTCATAGTTGATGTCCATAGCAAGGGCCTTCTGGTGCAGGTGACCTCCACAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611841.1
CDS CAA 72 bp TCCATGATGAAAAGCGAGTCGATGAGAACCAAGTCCTaGCGACTCTCCCTGTCGCCTGGACAGTCATCTGCA +
Preference number: 6 (lower is better)
Translates to: SMMKSESMRTKS*RLSLSPGQSSA
Trigger: TGCAGATGACTGTCCAGGCGACAGGGAGAGTCGCAAGGACTTGGTTCTCATCGACTCGCTTTTCATCATGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS CAA 90 bp GCGAATGGCACCTGCTGCTTCAGCAGAATATTCTTCTTCTGCTCCTaGCCCTCTCTGCGAATTTTCAGAAGTCCTGGTGTTGCGCGGTCA +
Preference number: 6 (lower is better)
Translates to: ANGTCCFSRIFFFCS*PSLRIFRSPGVARS
Trigger: TGACCGCGCAACACCAGGACTTCTGAAAATTCGCAGAGAGGGCAAGGAGCAGAAGAAGAATATTCTGCTGAAGCAGCAGGTGCCATTCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389561.7
ENST00000611841.1
CDS TCA 72 bp CTTTCTGCCAACACAGACGCGTGCTTGGGGTTCTTCTaGAAGGGATTCATGCCAAGCAGAGGTTTGATTGGG +
Preference number: 6 (lower is better)
Translates to: LSANTDACLGFF*KGFMPSRGLIG
Trigger: CCCAATCAAACCTCTGCTTGGCATGAATCCCTTTCAGAAGAACCCCAAGCACGCGTCTGTGTTGGCAGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389561.7
ENST00000611841.1
CDS GCA 72 bp GGAGGAATCACAAAGGCCACCCTGTCAATAACATCCTaGAGAGACTCTCCACACCGACAAAGCGTCAACATC +
Preference number: 6 (lower is better)
Translates to: GGITKATLSITS*RDSPHRQSVNI
Trigger: GATGTTGACGCTTTGTCGGTGTGGAGAGTCTCTGCAGGATGTTATTGACAGGGTGGCCTTTGTGATTCCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS CCA 72 bp TGTGGGTTTGGCAAAAGTTGGCAGGGGCTTGGCGAATaGCACCTGCTGCTTCAGCAGAATATTCTTCTTCTG +
Preference number: 6 (lower is better)
Translates to: CGFGKSWQGLGE*HLLLQQNILLL
Trigger: CAGAAGAAGAATATTCTGCTGAAGCAGCAGGTGCCATTCGCCAAGCCCCTGCCAACTTTTGCCAAACCCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000389561.7
ENST00000611841.1
CDS CCA 72 bp GAGAGGACGGTTGTTTTTACTCTTCCCCTCCTCTCGTaGAATGATGACATTCTCGTAGCGATTCCGGCACTG +
Preference number: 6 (lower is better)
Translates to: ERTVVFTLPLLS*NDDILVAIPAL
Trigger: CAGTGCCGGAATCGCTACGAGAATGTCATCATTCCACGAGAGGAGGGGAAGAGTAAAAACAACCGTCCTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000389561.7
ENST00000611841.1
CDS CCA 72 bp TTAAGTCAAAGTGGCTCGTGTACAGCTGGGTGTGTGTaGCATTCTCATCCTGGGCATAGATCTGGCTCGTAC +
Preference number: 6 (lower is better)
Translates to: LSQSGSCTAGCV*HSHPGHRSGSY
Trigger: GTACGAGCCAGATCTATGCCCAGGATGAGAATGCCACACACACCCAGCTGTACACGAGCCACTTTGACTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389561.7
ENST00000611841.1
CDS CCA 72 bp ATGTTAACAGTTCAATTGAGGACCCAGCCTTGCGCCTaGAAAGCGCCAAGGCACGTTTGTGCTAGAACACGT +
Preference number: 6 (lower is better)
Translates to: MLTVQLRTQPCA*KAPRHVCARTR
Trigger: ACGTGTTCTAGCACAAACGTGCCTTGGCGCTTTCCAGGCGCAAGGCTGGGTCCTCAATTGAACTGTTAACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611739.4
CDS CAA 72 bp GGCAACTTGCTGGATGCTGGCCACGGGTGTTTGCTGTaGAACAACTTGAGGAAGTTTTGCAACCTGGATCTG +
Preference number: 6 (lower is better)
Translates to: GNLLDAGHGCLL*NNLRKFCNLDL
Trigger: CAGATCCAGGTTGCAAAACTTCCTCAAGTTGTTCAACAGCAAACACCCGTGGCCAGCATCCAGCAAGTTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330386.7
ENST00000389561.7
ENST00000611739.4
ENST00000616136.1
CDS CAA 72 bp AGCAGAGGCAACTTGCTGGATGCTGGCCACGGGTGTTaGCTGTTGAACAACTTGAGGAAGTTTTGCAACCTG +
Preference number: 6 (lower is better)
Translates to: SRGNLLDAGHGC*LLNNLRKFCNL
Trigger: CAGGTTGCAAAACTTCCTCAAGTTGTTCAACAGCAAACACCCGTGGCCAGCATCCAGCAAGTTGCCTCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330386.7
ENST00000389561.7
ENST00000611739.4
ENST00000616136.1
CDS CAA 72 bp ATAGTCACTCCCAGACCAGGAGAAGCCAGAAGTGGCTaGTTCGGCCTTGGAGAAGCACTCCCAGTTTTCTTT +
Preference number: 6 (lower is better)
Translates to: IVTPRPGEARSG*FGLGEALPVFF
Trigger: AAAGAAAACTGGGAGTGCTTCTCCAAGGCCGAACAAGCCACTTCTGGCTTCTCCTGGTCTGGGAGTGACTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611841.1
CDS TCA 72 bp CACCCTTGTCACACCTGCACGGGGCTGCTACTTAGGTaGCTGAAAGCGATCACAATCTCTCAAATCCAATGT +
Preference number: 6 (lower is better)
Translates to: HPCHTCTGLLLR*LKAITISQIQC
Trigger: ACATTGGATTTGAGAGATTGTGATCGCTTTCAGTCACCTAAGTAGCAGCCCCGTGCAGGTGTGACAAGGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616136.1
CDS GCA 72 bp TTCAGAATGTTAACAGTTCAATTGAGGACCCAGCCTTaGGCCTGGAAAGCGCCAAGGCACGTTTGTGCTAGA +
Preference number: 6 (lower is better)
Translates to: FRMLTVQLRTQP*AWKAPRHVCAR
Trigger: TCTAGCACAAACGTGCCTTGGCGCTTTCCAGGCGCAAGGCTGGGTCCTCAATTGAACTGTTAACATTCTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611739.4
CDS CCA 72 bp CCTATCGCACCACTCCTGAGCTTTGGCATCCATCACTaGATTCAGGTCATTGTCATAAAACACGACGGTGTC +
Preference number: 6 (lower is better)
Translates to: PIAPLLSFGIHH*IQVIVIKHDGV
Trigger: GACACCGTCGTGTTTTATGACAATGACCTGAATCCAGTGATGGATGCCAAAGCTCAGGAGTGGTGCGATAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389561.7
ENST00000611841.1
CDS CAA 72 bp ACTCTCCACACCGACAAAGCGTCAACATCAGCTCACTaGGACTTTCTGAGGATGAAGTGTAACTGTGCGCTG +
Preference number: 6 (lower is better)
Translates to: TLHTDKASTSAH*DFLRMKCNCAL
Trigger: CAGCGCACAGTTACACTTCATCCTCAGAAAGTCCAAGTGAGCTGATGTTGACGCTTTGTCGGTGTGGAGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS CAA 72 bp AGCAGAGGCAACTTGCTGGATGCTGGCCACGGGTGTTaGCTGTTGAACAACTTGAGGAAGTTTTGCAACCTT +
Preference number: 6 (lower is better)
Translates to: SRGNLLDAGHGC*LLNNLRKFCNL
Trigger: AAGGTTGCAAAACTTCCTCAAGTTGTTCAACAGCAAACACCCGTGGCCAGCATCCAGCAAGTTGCCTCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611118.1
CDS CAA 90 bp TTTCAAGGGCCCTCCCTGCACAAGGCCCTCACGGACCCTGGTCTCTaGCTGGGTCCTGTTACTTACAGAAAACGGATGAAAATAATATTT +
Preference number: 6 (lower is better)
Translates to: FQGPSLHKALTDPGL*LGPVTYRKRMKIIF
Trigger: AAATATTATTTTCATCCGTTTTCTGTAAGTAACAGGACCCAGCAAGAGACCAGGGTCCGTGAGGGCCTTGTGCAGGGAGGGCCCTTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611118.1
CDS TCA 72 bp GGCTTCCCGATATTCATCCTCTCGGCAGCTTTGAACTaGTCCATGATGAAAAGCGAGTCGATGAGAACCAAG +
Preference number: 6 (lower is better)
Translates to: GFPIFILSAALN*SMMKSESMRTK
Trigger: CTTGGTTCTCATCGACTCGCTTTTCATCATGGATCAGTTCAAAGCTGCCGAGAGGATGAATATCGGGAAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS TCA 72 bp TGCCATAGACTGGAGCTTGAGAACAGCGCCGCTCGTTaGCTAAATAAATCTGATCCAGGCGCTCTTTCAAGA +
Preference number: 6 (lower is better)
Translates to: CHRLELENSAAR*LNKSDPGALSR
Trigger: TCTTGAAAGAGCGCCTGGATCAGATTTATTTAGTCAACGAGCGGCGCTGTTCTCAAGCTCCAGTCTATGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS TCA 72 bp AAGGTTCCTGAGAAAGCACCACAAACTCCTCAGCTTTaGCCGGGAAGCCAGCATCATCCATGGGAGAATAAA +
Preference number: 6 (lower is better)
Translates to: KVPEKAPQTPQL*PGSQHHPWENK
Trigger: TTTATTCTCCCATGGATGATGCTGGCTTCCCGGTCAAAGCTGAGGAGTTTGTGGTGCTTTCTCAGGAACCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389561.7
ENST00000611841.1
CDS TCA 72 bp CCTGCACCAGAAGGCCCTTGCTATGGACATCAACTATaGCTCACTCCCAGCTGTATTCAAACTGAACGAATG +
Preference number: 6 (lower is better)
Translates to: PAPEGPCYGHQL*LTPSCIQTERM
Trigger: CATTCGTTCAGTTTGAATACAGCTGGGAGTGAGTCATAGTTGATGTCCATAGCAAGGGCCTTCTGGTGCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611841.1
CDS CCA 72 bp TGCATCTCCCGATCCTATCGCACCACTCCTGAGCTTTaGCATCCATCACTGGATTCAGGTCATTGTCATAAA +
Preference number: 6 (lower is better)
Translates to: CISRSYRTTPEL*HPSLDSGHCHK
Trigger: TTTATGACAATGACCTGAATCCAGTGATGGATGCCAAAGCTCAGGAGTGGTGCGATAGGATCGGGAGATGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389561.7
ENST00000611841.1
CDS CCA 72 bp GTAAGCTGCTCCATGAAGTCAGCTAGCTCCTCTAATTaGGATGGTTCTTCATCACACGGCATGTTCTCAGAG +
Preference number: 6 (lower is better)
Translates to: VSCSMKSASSSN*DGSSSHGMFSE
Trigger: CTCTGAGAACATGCCGTGTGATGAAGAACCATCCCAATTAGAGGAGCTAGCTGACTTCATGGAGCAGCTTAC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389561.7
ENST00000611841.1
CDS CAA 72 bp GCCATTCTCTTTCTAGTGTGTCTTCAGCTGGAAACTTaGGGACAAAGGTGCACTGTCTCGTGGACCCTAGAA +
Preference number: 6 (lower is better)
Translates to: AILFLVCLQLET*GQRCTVSWTLE
Trigger: TTCTAGGGTCCACGAGACAGTGCACCTTTGTCCCAAAGTTTCCAGCTGAAGACACACTAGAAAGAGAATGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611841.1
CDS TCA 72 bp TTAACAACGTCACTGACAAGATCCCAATTAGGTGTGTaGGCAGGTGACACGATTGTGAGGTTCAAAGGCAGC +
Preference number: 6 (lower is better)
Translates to: LTTSLTRSQLGV*AGDTIVRFKGS
Trigger: GCTGCCTTTGAACCTCACAATCGTGTCACCTGCTCACACACCTAATTGGGATCTTGTCAGTGACGTTGTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000389561.7
ENST00000611841.1
CDS GCA 72 bp AATGGCACCTGCTGCTTCAGCAGAATATTCTTCTTCTaGTCCTTGCCCTCTCTGCGAATTTTCAGAAGTCCT +
Preference number: 6 (lower is better)
Translates to: NGTCCFSRIFFF*SLPSLRIFRSP
Trigger: AGGACTTCTGAAAATTCGCAGAGAGGGCAAGGAGCAGAAGAAGAATATTCTGCTGAAGCAGCAGGTGCCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389561.7
ENST00000611841.1
CDS CCA 72 bp CTTCTGATAATCTCTGAGAGCCCCATACAACAAAGATaGAGCATTAAACTTGACCGAGGTTGTGACCCGAGC +
Preference number: 6 (lower is better)
Translates to: LLIISESPIQQR*SIKLDRGCDPS
Trigger: GCTCGGGTCACAACCTCGGTCAAGTTTAATGCTCCATCTTTGTTGTATGGGGCTCTCAGAGATTATCAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS CAA 90 bp CTGTTTGGTGGTCCACAACGCCTTCATTTGCTTCCTCCTCTTCAATaGTTTCCTCTTCATCGTCCACTTCGTCATCAGTCAAAGATATGC +
Preference number: 6 (lower is better)
Translates to: LFGGPQRLHLLPPLQ*FPLHRPLRHQSKIC
Trigger: GCATATCTTTGACTGATGACGAAGTGGACGATGAAGAGGAAACAATTGAAGAGGAGGAAGCAAATGAAGGCGTTGTGGACCACCAAACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000333577.8
ENST00000389561.7
CDS CAA 90 bp CTCTTTGCTTTGAGTTCTCTGTGGCTGCCAATATATGAGAGGATTTaGAGTCCGGGACACCAACGTTTCAATTCAAGCTCCCACTTGAGT +
Preference number: 6 (lower is better)
Translates to: LFALSSLWLPIYERI*SPGHQRFNSSSHLS
Trigger: ACTCAAGTGGGAGCTTGAATTGAAACGTTGGTGTCCCGGACTCAAAATCCTCTCATATATTGGCAGCCACAGAGAACTCAAAGCAAAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS TCA 72 bp GTCCGGGACACCAACGTTTCAATTCAAGCTCCCACTTaGGTATGTTACAACTTCTCACAACAACAAGATGGG +
Preference number: 6 (lower is better)
Translates to: VRDTNVSIQAPT*VCYNFSQQQDG
Trigger: CCCATCTTGTTGTTGTGAGAAGTTGTAACATACTCAAGTGGGAGCTTGAATTGAAACGTTGGTGTCCCGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS TCA 72 bp CTTGTCACACCTGCACGGGGCTGCTACTTAGGTGACTaGAAGCGATCACAATCTCTCAAATCCAATGTAAAA +
Preference number: 6 (lower is better)
Translates to: LVTPARGCYLGD*KRSQSLKSNVK
Trigger: TTTTACATTGGATTTGAGAGATTGTGATCGCTTTCAGTCACCTAAGTAGCAGCCCCGTGCAGGTGTGACAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616136.1
CDS CCA 72 bp AGCCTACCTTCCTTGGCTAAATTAGAAAGTTCTGTTTaGTGGTCCACAACGCCTTCATTTGCTTCCTCCTCT +
Preference number: 6 (lower is better)
Translates to: SLPSLAKLESSV*WSTTPSFASSS
Trigger: AGAGGAGGAAGCAAATGAAGGCGTTGTGGACCACCAAACAGAACTTTCTAATTTAGCCAAGGAAGGTAGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333577.8
CDS CCA 72 bp CACTTGAGTATGTTACAACTTCTCACAACAACAAGATaGGGGCCCCAATTACCTTCGTTACAAGCTAGGTGG +
Preference number: 6 (lower is better)
Translates to: HLSMLQLLTTTR*GPQLPSLQARW
Trigger: CCACCTAGCTTGTAACGAAGGTAATTGGGGCCCCCATCTTGTTGTTGTGAGAAGTTGTAACATACTCAAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS CCA 72 bp TATGACTCACTCCCAGCTGTATTCAAACTGAACGAATaGTCACCCATGATGTTCAATGAGGGAGGAGTACAC +
Preference number: 6 (lower is better)
Translates to: YDSLPAVFKLNE*SPMMFNEGGVH
Trigger: GTGTACTCCTCCCTCATTGAACATCATGGGTGACCATTCGTTCAGTTTGAATACAGCTGGGAGTGAGTCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611841.1
CDS CAA 72 bp TTGAGTTCTCTGTGGCTGCCAATATATGAGAGGATTTaGAGTCCGGGACACCAACGTTTCAATTCAAGCTCC +
Preference number: 6 (lower is better)
Translates to: LSSLWLPIYERI*SPGHQRFNSSS
Trigger: GGAGCTTGAATTGAAACGTTGGTGTCCCGGACTCAAAATCCTCTCATATATTGGCAGCCACAGAGAACTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS TCA 72 bp TCTCTTTGCTTTGAGTTCTCTGTGGCTGCCAATATATaGGAGGATTTTGAGTCCGGGACACCAACGTTTCAA +
Preference number: 6 (lower is better)
Translates to: SLCFEFSVAANI*EDFESGTPTFQ
Trigger: TTGAAACGTTGGTGTCCCGGACTCAAAATCCTCTCATATATTGGCAGCCACAGAGAACTCAAAGCAAAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000389561.7
CDS TCA 72 bp AAAATCAGCACCCGACGTCCTTCAGATTTCAATTTCTaGAGCAAGATAGCTAAAGCTTCCAACTTCCCTGAG +
Preference number: 6 (lower is better)
Translates to: KISTRRPSDFNF*SKIAKASNFPE
Trigger: CTCAGGGAAGTTGGAAGCTTTAGCTATCTTGCTTCAGAAATTGAAATCTGAAGGACGTCGGGTGCTGATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000389561.7
ENST00000611841.1
CDS CCA 72 bp CTGGTATTTAGCCTTCAGCCACTGTTCATATCTGTGTaGCTCACCGTGAAAGTGTGCAAAAATGACATGAAT +
Preference number: 6 (lower is better)
Translates to: LVFSLQPLFISV*LTVKVCKNDMN
Trigger: ATTCATGTCATTTTTGCACACTTTCACGGTGAGCCACACAGATATGAACAGTGGCTGAAGGCTAAATACCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611739.4
CDS TCA 72 bp ATTCAAACTGAACGAATGGTCACCCATGATGTTCAATaGGGGAGGAGTACACAAAGACAAATCAGTACTCGA +
Preference number: 6 (lower is better)
Translates to: IQTERMVTHDVQ*GRSTQRQISTR
Trigger: TCGAGTACTGATTTGTCTTTGTGTACTCCTCCCTCATTGAACATCATGGGTGACCATTCGTTCAGTTTGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611841.1
CDS CAA 90 bp GTACACGGGGTAACAAACTGGTATGCACCATTTTTGCAGATCATATaGTGTACATCTGACGTTTACGTATCTGCTTTATCAGCCATGCTT +
Preference number: 6 (lower is better)
Translates to: VHGVTNWYAPFLQII*CTSDVYVSALSAML
Trigger: AAGCATGGCTGATAAAGCAGATACGTAAACGTCAGATGTACACAATATGATCTGCAAAAATGGTGCATACCAGTTTGTTACCCCGTGTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616136.1
CDS CAA 72 bp TTAGTACACGGGGTAACAAACTGGTATGCACCATTTTaGCAGATCATATTGTGTACATCTGACGTTTACGTA +
Preference number: 6 (lower is better)
Translates to: LVHGVTNWYAPF*QIILCTSDVYV
Trigger: TACGTAAACGTCAGATGTACACAATATGATCTGCAAAAATGGTGCATACCAGTTTGTTACCCCGTGTACTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616136.1
CDS TCA 72 bp GTATGCACCATTTTTGCAGATCATATTGTGTACATCTaGCGTTTACGTATCTGCTTTATCAGCCATGCTTAT +
Preference number: 6 (lower is better)
Translates to: VCTIFADHIVYI*RLRICFISHAY
Trigger: ATAAGCATGGCTGATAAAGCAGATACGTAAACGTCAGATGTACACAATATGATCTGCAAAAATGGTGCATAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616136.1