RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EOMES (Homo sapiens)

Ensembl gene IDs: ENSG00000163508

Ensembl transcript IDs: ENST00000295743.8, ENST00000449599.4, ENST00000461503.2

Found 373 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCCAGCACACAGCAGAGGCCTAGCAAGTCTCAAGTGAGGCAATCCTaGACTAGGGCAAACATGGCTTGTTCCAAAAGCCGGGGGTTAAGG +
Preference number: 1 (lower is better)
Translates to: PSTQQRPSKSQVRQS*TRANMACSKSRGLR
Trigger: CCTTAACCCCCGGCTTTTGGAACAAGCCATGTTTGCCCTAGTCCAGGATTGCCTCACTTGAGACTTGCTAGGCCTCTGCTGTGTGCTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
3UTR-3UTR TCA 90 bp CAGAGGCCTAGCAAGTCTCAAGTGAGGCAATCCTGGACTAGGGCAAACATGGCTCACAGCCTGCTTCTTTaGAGGGTTAGTGTCTCCCCA +
Preference number: 2 (lower is better)
Translates to: QRPSKSQVRQSWTRANMAHSLLL*RVSVSP
Trigger: TGGGGAGACACTAACCCTTCAAAGAAGCAGGCTGTG...AGCCATGTTTGCCCTAGTCCAGGATTGCCTCACTTGAGACTTGCTAGGCCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
3UTR-3UTR GCA 90 bp AGGCCTAGCAAGTCTCAAGTGAGGCAATCCTGGACTAGGGCAAACATGGCTTGTCCAATGTTCACAGCCTaGTTCTTTGAAGGGTTAGTG +
Preference number: 2 (lower is better)
Translates to: RPSKSQVRQSWTRANMACPMFTA*FFEGLV
Trigger: CACTAACCCTTCAAAGAAGCAGGCTGTGAACATTGG...ACAAGCCATGTTTGCCCTAGTCCAGGATTGCCTCACTTGAGACTTGCTAGGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
3UTR-3UTR CCA 90 bp CAGAGGCCTAGCAAGTCTCAAGTGAGGCAATCCTGGACTAGGGCAAACATGGCTAGTATCTTTTGCCCCTaGCAGAATGTAACAGCAAAA +
Preference number: 2 (lower is better)
Translates to: QRPSKSQVRQSWTRANMASIFCP*QNVTAK
Trigger: TTTTGCTGTTACATTCTGCCAGGGGCAAAAGATACT...AGCCATGTTTGCCCTAGTCCAGGATTGCCTCACTTGAGACTTGCTAGGCCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
3UTR-3UTR GCA 90 bp AGCAAAATGTCTCCTTCTGAAACGGAAGGCACAGCCCTCTTTCAGAAGCAAAACCCAATGTTCACAGCCTaGTTCTTTGAAGGGTTAGTG +
Preference number: 2 (lower is better)
Translates to: SKMSPSETEGTALFQKQNPMFTA*FFEGLV
Trigger: CACTAACCCTTCAAAGAAGCAGGCTGTGAACATTGG...GTTTTGCTTCTGAAAGAGGGCTGTGCCTTCCGTTTCAGAAGGAGACATTTTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
3UTR-3UTR CCA 90 bp GTAACAGCAAAATGTCTCCTTCTGAAACGGAAGGCACAGCCCTCTTTCAGAAGCAGGCAAACATCTTTTTaGCAACCTAGGCAAAGAAGA +
Preference number: 2 (lower is better)
Translates to: VTAKCLLLKRKAQPSFRSRQTSF*QPRQRR
Trigger: TCTTCTTTGCCTAGGTTGCCAAAAAGATGTTTGCCT...GCTTCTGAAAGAGGGCTGTGCCTTCCGTTTCAGAAGGAGACATTTTGCTGTTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
3UTR-3UTR CCA 90 bp CCTTCTGAAACGGAAGGCACAGCCCTCTTTCAGAAGCAAAACACCTTAACACTCAGGCAAACATCTTTTTaGCAACCTAGGCAAAGAAGA +
Preference number: 2 (lower is better)
Translates to: PSETEGTALFQKQNTLTLRQTSF*QPRQRR
Trigger: TCTTCTTTGCCTAGGTTGCCAAAAAGATGTTTGCCT...GAGTGTTAAGGTGTTTTGCTTCTGAAAGAGGGCTGTGCCTTCCGTTTCAGAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
3UTR-3UTR CCA 90 bp AGCAAAATGTCTCCTTCTGAAACGGAAGGCACAGCCCTCTTTCAGAAGCAAAACCAGGATGCATCAAGGTaGAAGGCAAACATCTTTTTG +
Preference number: 2 (lower is better)
Translates to: SKMSPSETEGTALFQKQNQDASR*KANIFL
Trigger: CAAAAAGATGTTTGCCTTCCACCTTGATGCATCCTG...GTTTTGCTTCTGAAAGAGGGCTGTGCCTTCCGTTTCAGAAGGAGACATTTTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
3UTR-3UTR CCA 90 bp GCAGAATGTAACAGCAAAATGTCTCCTTCTGAAACGGAAGGCACAGCCCTCTTTCAGGATGCATCAAGGTaGAAGGCAAACATCTTTTTG +
Preference number: 2 (lower is better)
Translates to: AECNSKMSPSETEGTALFQDASR*KANIFL
Trigger: CAAAAAGATGTTTGCCTTCCACCTTGATGCATCCTG...AAAGAGGGCTGTGCCTTCCGTTTCAGAAGGAGACATTTTGCTGTTACATTCTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
3UTR-3UTR GCA 90 bp CAAATTCTTTACAAAGCCAAAGCACCAGTTTTACATTATCCCAGACACCTATGTGGTGACTCCTTAGCTTaGTCTCTCCTGAGTCCCACT +
Preference number: 2 (lower is better)
Translates to: QILYKAKAPVLHYPRHLCGDSLA*SLLSPT
Trigger: AGTGGGACTCAGGAGAGAGCAAGCTAAGGAGTCACC...ACATAGGTGTCTGGGATAATGTAAAACTGGTGCTTTGGCTTTGTAAAGAATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
3UTR-3UTR CCA 90 bp CAAATTCTTTACAAAGCCAAAGCACCAGTTTTACATTATCCCAGACACCTATGTGGACTAGGGCAAACATaGCTTGTTCCAAAAGCCGGG +
Preference number: 2 (lower is better)
Translates to: QILYKAKAPVLHYPRHLCGLGQT*LVPKAG
Trigger: CCCGGCTTTTGGAACAAGCCATGTTTGCCCTAGTCC...ACATAGGTGTCTGGGATAATGTAAAACTGGTGCTTTGGCTTTGTAAAGAATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
3UTR-3UTR CCA 90 bp CTTTACAAAGCCAAAGCACCAGTTTTACATTATCCCAGACACCTATGTAGACTACAAGTGAGGCAATCCTaGACTAGGGCAAACATGGCT +
Preference number: 2 (lower is better)
Translates to: LYKAKAPVLHYPRHLCRLQVRQS*TRANMA
Trigger: AGCCATGTTTGCCCTAGTCCAGGATTGCCTCACTTG...TAGTCTACATAGGTGTCTGGGATAATGTAAAACTGGTGCTTTGGCTTTGTAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
3UTR-3UTR CCA 90 bp GCAGAATGTAACAGCAAAATGTCTCCTTCTGAAACGGAAGGCACAGCCCTCTTTGCAATCAAAAAGCTTTaGCACCTTCTTTTAGAGAAT +
Preference number: 2 (lower is better)
Translates to: AECNSKMSPSETEGTALFAIKKL*HLLLEN
Trigger: ATTCTCTAAAAGAAGGTGCCAAAGCTTTTTGATTGC...AAAGAGGGCTGTGCCTTCCGTTTCAGAAGGAGACATTTTGCTGTTACATTCTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
3UTR-3UTR GCA 90 bp ATAGAAATGAGAATCAAAGGTTTTAACTCATCTGATAGCACTGGGCACCCAATGTTGCACAAAACAGGATaGATCAAGGTGGAAGGCAAA +
Preference number: 2 (lower is better)
Translates to: IEMRIKGFNSSDSTGHPMLHKTG*IKVEGK
Trigger: TTTGCCTTCCACCTTGATGCATCCTGTTTTGTGCAA...CATTGGGTGCCCAGTGCTATCAGATGAGTTAAAACCTTTGATTCTCATTTCTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
3UTR-3UTR GCA 90 bp CAAATTCTTTACAAAGCCAAAGCACCAGTTTTACATTATCCCAGACACCTATGTTTGCACAAAACAGGATaGATCAAGGTGGAAGGCAAA +
Preference number: 2 (lower is better)
Translates to: QILYKAKAPVLHYPRHLCLHKTG*IKVEGK
Trigger: TTTGCCTTCCACCTTGATGCATCCTGTTTTGTGCAA...ACATAGGTGTCTGGGATAATGTAAAACTGGTGCTTTGGCTTTGTAAAGAATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
3UTR-3UTR CCA 90 bp GATTTGCAAATTCTTTACAAAGCCAAAGCACCAGTTTTACATTATCCCAGACACCAGGATGCATCAAGGTaGAAGGCAAACATCTTTTTG +
Preference number: 2 (lower is better)
Translates to: DLQILYKAKAPVLHYPRHQDASR*KANIFL
Trigger: CAAAAAGATGTTTGCCTTCCACCTTGATGCATCCTG...GTGTCTGGGATAATGTAAAACTGGTGCTTTGGCTTTGTAAAGAATTTGCAAATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
3UTR CCA 72 bp CAGCAGAGGCCTAGCAAGTCTCAAGTGAGGCAATCCTaGACTAGGGCAAACATGGCTTGTTCCAAAAGCCGG +
Preference number: 3 (lower is better)
Translates to: QQRPSKSQVRQS*TRANMACSKSR
Trigger: CCGGCTTTTGGAACAAGCCATGTTTGCCCTAGTCCAGGATTGCCTCACTTGAGACTTGCTAGGCCTCTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
3UTR-3UTR CAA 90 bp GTAACAGCAAAATGTCTCCTTCTGAAACGGAAGGCACAGCCCTCTTTCAGAAGCTTAAAAATGCTAGGTTaGTTTCAGTTACCTGCAGCA +
Preference number: 3 (lower is better)
Translates to: VTAKCLLLKRKAQPSFRSLKMLG*FQLPAA
Trigger: TGCTGCAGGTAACTGAAACAAACCTAGCATTTTTAA...GCTTCTGAAAGAGGGCTGTGCCTTCCGTTTCAGAAGGAGACATTTTGCTGTTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR GCA 90 bp CAGAGGCCTAGCAAGTCTCAAGTGAGGCAATCCTGGACTAGGGCAAACATGGCTGCAAGATCCCGCCGCTaGGGCTCCAGGGTACGGCCC +
Preference number: 4 (lower is better)
Translates to: QRPSKSQVRQSWTRANMAARSRR*GSRVRP
Trigger: GGGCCGTACCCTGGAGCCGCAGCGGCGGGATCTTGC...AGCCATGTTTGCCCTAGTCCAGGATTGCCTCACTTGAGACTTGCTAGGCCTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
CDS-3UTR CCA 90 bp CAGAGGCCTAGCAAGTCTCAAGTGAGGCAATCCTGGACTAGGGCAAACATGGCTGCCCCAGCCGCCGCCTaGTACGGGAAGAGTGAGCAG +
Preference number: 4 (lower is better)
Translates to: QRPSKSQVRQSWTRANMAAPAAA*YGKSEQ
Trigger: CTGCTCACTCTTCCCGTACCAGGCGGCGGCTGGGGC...AGCCATGTTTGCCCTAGTCCAGGATTGCCTCACTTGAGACTTGCTAGGCCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
CDS-3UTR TCA 90 bp GTAACAGCAAAATGTCTCCTTCTGAAACGGAAGGCACAGCCCTCTTTCAGAAGCGCCAGCTCCGACCCCTaGGGACCGGGGGACTGGAGG +
Preference number: 4 (lower is better)
Translates to: VTAKCLLLKRKAQPSFRSASSDP*GPGDWR
Trigger: CCTCCAGTCCCCCGGTCCTCAGGGGTCGGAGCTGGC...GCTTCTGAAAGAGGGCTGTGCCTTCCGTTTCAGAAGGAGACATTTTGCTGTTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
CDS-3UTR GCA 90 bp AGGCCTAGCAAGTCTCAAGTGAGGCAATCCTGGACTAGGGCAAACATGGCTTGTCCCCGGCTTGGCCACTaGCGCAGCGCTGGCAAATGC +
Preference number: 4 (lower is better)
Translates to: RPSKSQVRQSWTRANMACPRLGH*RSAGKC
Trigger: GCATTTGCCAGCGCTGCGGCAGTGGCCAAGCCGGGG...ACAAGCCATGTTTGCCCTAGTCCAGGATTGCCTCACTTGAGACTTGCTAGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
CDS-3UTR CCA 90 bp CCTTCTGAAACGGAAGGCACAGCCCTCTTTCAGAAGCAAAACACCTTAACACTCCTGCGCCCTCCCGGGTaGGCACACAGCCGCGGGGAA +
Preference number: 4 (lower is better)
Translates to: PSETEGTALFQKQNTLTLLRPPG*AHSRGE
Trigger: TTCCCCGCGGCTGTGTGCCCACCCGGGAGGGCGCAG...GAGTGTTAAGGTGTTTTGCTTCTGAAAGAGGGCTGTGCCTTCCGTTTCAGAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
CDS-3UTR CCA 90 bp ACTGGGCACCCAATGTTCACAGCCTGCTTCTTTGAAGGGTTAGTGTCTCCCCAACCCTGGAAGCGCCAGTaGTTGGGGTCCGCCAGCACC +
Preference number: 4 (lower is better)
Translates to: TGHPMFTACFFEGLVSPQPWKRQ*LGSAST
Trigger: GGTGCTGGCGGACCCCAACCACTGGCGCTTCCAGGG...TTGGGGAGACACTAACCCTTCAAAGAAGCAGGCTGTGAACATTGGGTGCCCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR TCA 90 bp ACTGGGCACCCAATGTTCACAGCCTGCTTCTTTGAAGGGTTAGTGTCTCCCCAACGTACTGGCGCGCCCTaGATCCAGCGTCCTTTCCGG +
Preference number: 4 (lower is better)
Translates to: TGHPMFTACFFEGLVSPQRTGAP*IQRPFR
Trigger: CCGGAAAGGACGCTGGATTCAGGGCGCGCCAGTACG...TTGGGGAGACACTAACCCTTCAAAGAAGCAGGCTGTGAACATTGGGTGCCCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000461503.2
CDS-3UTR TCA 90 bp CAGAGGCCTAGCAAGTCTCAAGTGAGGCAATCCTGGACTAGGGCAAACATGGCTGGTGGCGGTGGAATTTaGGCCACAGAGGCCGGTTGC +
Preference number: 4 (lower is better)
Translates to: QRPSKSQVRQSWTRANMAGGGGI*ATEAGC
Trigger: GCAACCGGCCTCTGTGGCTCAAATTCCACCGCCACC...AGCCATGTTTGCCCTAGTCCAGGATTGCCTCACTTGAGACTTGCTAGGCCTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
CDS-3UTR GCA 90 bp AGCAAAATGTCTCCTTCTGAAACGGAAGGCACAGCCCTCTTTCAGAAGCAAAACCTCGCGGGCCGCTACTaGGCGTACTGGCGCGCCCTG +
Preference number: 4 (lower is better)
Translates to: SKMSPSETEGTALFQKQNLAGRY*AYWRAL
Trigger: CAGGGCGCGCCAGTACGCGCAGTAGCGGCCCGCGAG...GTTTTGCTTCTGAAAGAGGGCTGTGCCTTCCGTTTCAGAAGGAGACATTTTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000461503.2
CDS-3UTR GCA 90 bp TCAAAGGTTTTAACTCATCTGATAGCACTGGGCACCCAATGTTCACAGCCTGCTCAGCGCTCCCGCCGCTaGCGCCTCGCGCACTCTCCA +
Preference number: 4 (lower is better)
Translates to: SKVLTHLIALGTQCSQPAQRSRR*RLAHSP
Trigger: TGGAGAGTGCGCGAGGCGGCAGCGGCGGGAGCGCTG...AGCAGGCTGTGAACATTGGGTGCCCAGTGCTATCAGATGAGTTAAAACCTTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
CDS-3UTR GCA 90 bp GGAAGGCACAGCCCTCTTTCAGAAGCAAAACACCTTAACACTCGGCTTCTATTTGCAAGATCCCGCCGCTaGGGCTCCAGGGTACGGCCC +
Preference number: 4 (lower is better)
Translates to: GRHSPLSEAKHLNTRLLFARSRR*GSRVRP
Trigger: GGGCCGTACCCTGGAGCCGCAGCGGCGGGATCTTGC...AAATAGAAGCCGAGTGTTAAGGTGTTTTGCTTCTGAAAGAGGGCTGTGCCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
CDS-3UTR GCA 90 bp AGGCCTAGCAAGTCTCAAGTGAGGCAATCCTGGACTAGGGCAAACATGGCTTGTGCCACAGAGGCCGGTTaGACAGGTAGACGTGGGCAC +
Preference number: 4 (lower is better)
Translates to: RPSKSQVRQSWTRANMACATEAG*TGRRGH
Trigger: GTGCCCACGTCTACCTGTGCAACCGGCCTCTGTGGC...ACAAGCCATGTTTGCCCTAGTCCAGGATTGCCTCACTTGAGACTTGCTAGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
CDS-3UTR TCA 90 bp AGGCCTAGCAAGTCTCAAGTGAGGCAATCCTGGACTAGGGCAAACATGGCTTGTGCCAGGCAGGTTCACTaGGCTCACCAAGAGCTGCTC +
Preference number: 4 (lower is better)
Translates to: RPSKSQVRQSWTRANMACARQVH*AHQELL
Trigger: GAGCAGCTCTTGGTGAGCTCAGTGAACCTGCCTGGC...ACAAGCCATGTTTGCCCTAGTCCAGGATTGCCTCACTTGAGACTTGCTAGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
CDS-3UTR TCA 90 bp ACTGGGCACCCAATGTTCACAGCCTGCTTCTTTGAAGGGTTAGTGTCTCCCCAAGCCAGGCAGGTTCACTaGGCTCACCAAGAGCTGCTC +
Preference number: 4 (lower is better)
Translates to: TGHPMFTACFFEGLVSPQARQVH*AHQELL
Trigger: GAGCAGCTCTTGGTGAGCTCAGTGAACCTGCCTGGC...TTGGGGAGACACTAACCCTTCAAAGAAGCAGGCTGTGAACATTGGGTGCCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
CDS-3UTR TCA 90 bp GTAACAGCAAAATGTCTCCTTCTGAAACGGAAGGCACAGCCCTCTTTCAGAAGCGTTGCTGGACAGGCGTaGCAAGCCACCGCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: VTAKCLLLKRKAQPSFRSVAGQA*QATAGE
Trigger: CTCCCCAGCGGTGGCTTGTCACGCCTGTCCAGCAAC...GCTTCTGAAAGAGGGCTGTGCCTTCCGTTTCAGAAGGAGACATTTTGCTGTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR CCA 90 bp GGAAGGCACAGCCCTCTTTCAGAAGCAAAACACCTTAACACTCGGCTTCTATTTCCACTGCCGCAGCGCTaGCAAATGCGTCCCCGGCGT +
Preference number: 4 (lower is better)
Translates to: GRHSPLSEAKHLNTRLLFPLPQR*QMRPRR
Trigger: ACGCCGGGGACGCATTTGCCAGCGCTGCGGCAGTGG...AAATAGAAGCCGAGTGTTAAGGTGTTTTGCTTCTGAAAGAGGGCTGTGCCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
CDS-3UTR CCA 90 bp AAGCTTTGGCACCTTCTTTTAGAGAATTGCACAAAACAGGATGCATCAAGGTGGCTGCGCCCTCCCGGGTaGGCACACAGCCGCGGGGAA +
Preference number: 4 (lower is better)
Translates to: KLWHLLLENCTKQDASRWLRPPG*AHSRGE
Trigger: TTCCCCGCGGCTGTGTGCCCACCCGGGAGGGCGCAG...CCACCTTGATGCATCCTGTTTTGTGCAATTCTCTAAAAGAAGGTGCCAAAGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
CDS-3UTR CCA 90 bp CCTTCTGAAACGGAAGGCACAGCCCTCTTTCAGAAGCAAAACACCTTAACACTCGGAAGCGCCAGTGGTTaGGGTCCGCCAGCACCACCT +
Preference number: 4 (lower is better)
Translates to: PSETEGTALFQKQNTLTLGSASG*GPPAPP
Trigger: AGGTGGTGCTGGCGGACCCCAACCACTGGCGCTTCC...GAGTGTTAAGGTGTTTTGCTTCTGAAAGAGGGCTGTGCCTTCCGTTTCAGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR CCA 90 bp GGATGCATCAAGGTGGAAGGCAAACATCTTTTTGGCAACCTAGGCAAAGAAGACCCCTGGAAGCGCCAGTaGTTGGGGTCCGCCAGCACC +
Preference number: 4 (lower is better)
Translates to: GCIKVEGKHLFGNLGKEDPWKRQ*LGSAST
Trigger: GGTGCTGGCGGACCCCAACCACTGGCGCTTCCAGGG...GTCTTCTTTGCCTAGGTTGCCAAAAAGATGTTTGCCTTCCACCTTGATGCATCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR TCA 90 bp GCAGAATGTAACAGCAAAATGTCTCCTTCTGAAACGGAAGGCACAGCCCTCTTTCTGGTACGGGAAGAGTaGGCAGGGCGCAGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: AECNSKMSPSETEGTALFLVREE*AGRSQL
Trigger: GAGCTGGCTGCGCCCTGCTCACTCTTCCCGTACCAG...AAAGAGGGCTGTGCCTTCCGTTTCAGAAGGAGACATTTTGCTGTTACATTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
CDS-3UTR TCA 90 bp ACTCTCCCCTTGCCCCTGCAGCTGTTAAGTGATTTGCAAATTCTTTACAAAGCCGTTGCTGGACAGGCGTaGCAAGCCACCGCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: TLPLPLQLLSDLQILYKAVAGQA*QATAGE
Trigger: CTCCCCAGCGGTGGCTTGTCACGCCTGTCCAGCAAC...GGCTTTGTAAAGAATTTGCAAATCACTTAACAGCTGCAGGGGCAAGGGGAGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
CDS-3UTR TCA 90 bp TCAAAGGTTTTAACTCATCTGATAGCACTGGGCACCCAATGTTCACAGCCTGCTGTTGCTGGACAGGCGTaGCAAGCCACCGCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: SKVLTHLIALGTQCSQPAVAGQA*QATAGE
Trigger: CTCCCCAGCGGTGGCTTGTCACGCCTGTCCAGCAAC...AGCAGGCTGTGAACATTGGGTGCCCAGTGCTATCAGATGAGTTAAAACCTTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR GCA 90 bp CAGAGGCCTAGCAAGTCTCAAGTGAGGCAATCCTGGACTAGGGCAAACATGGCTGCTCCCCTAACTGCATaGTTTGCAAAGCGCAGACGG +
Preference number: 4 (lower is better)
Translates to: QRPSKSQVRQSWTRANMAAPLTA*FAKRRR
Trigger: CCGTCTGCGCTTTGCAAAGCATGCAGTTAGGGGAGC...AGCCATGTTTGCCCTAGTCCAGGATTGCCTCACTTGAGACTTGCTAGGCCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
CDS-3UTR GCA 90 bp ATCAAGGTGGAAGGCAAACATCTTTTTGGCAACCTAGGCAAAGAAGACAACAAAGCTCCTGGGCCGAACTaGGCCCTCCCGGGTGGGCAC +
Preference number: 4 (lower is better)
Translates to: IKVEGKHLFGNLGKEDNKAPGPN*ALPGGH
Trigger: GTGCCCACCCGGGAGGGCGCAGTTCGGCCCAGGAGC...TTTGTTGTCTTCTTTGCCTAGGTTGCCAAAAAGATGTTTGCCTTCCACCTTGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
CDS-3UTR CCA 90 bp GGAAGGCACAGCCCTCTTTCAGAAGCAAAACACCTTAACACTCGGCTTCTATTTGGAAGCGCCAGTGGTTaGGGTCCGCCAGCACCACCT +
Preference number: 4 (lower is better)
Translates to: GRHSPLSEAKHLNTRLLFGSASG*GPPAPP
Trigger: AGGTGGTGCTGGCGGACCCCAACCACTGGCGCTTCC...AAATAGAAGCCGAGTGTTAAGGTGTTTTGCTTCTGAAAGAGGGCTGTGCCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR CCA 90 bp CAGAGGCCTAGCAAGTCTCAAGTGAGGCAATCCTGGACTAGGGCAAACATGGCTCAGTGGGGCTTGTTCTaGAGGTCCATGGTAGTCCAG +
Preference number: 4 (lower is better)
Translates to: QRPSKSQVRQSWTRANMAQWGLF*RSMVVQ
Trigger: CTGGACTACCATGGACCTCCAGAACAAGCCCCACTG...AGCCATGTTTGCCCTAGTCCAGGATTGCCTCACTTGAGACTTGCTAGGCCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
CDS-3UTR TCA 90 bp CAAAACAGGATGCATCAAGGTGGAAGGCAAACATCTTTTTGGCAACCTAGGCAACTGGTACGGGAAGAGTaGGCAGGGCGCAGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: QNRMHQGGRQTSFWQPRQLVREE*AGRSQL
Trigger: GAGCTGGCTGCGCCCTGCTCACTCTTCCCGTACCAG...TTGCCTAGGTTGCCAAAAAGATGTTTGCCTTCCACCTTGATGCATCCTGTTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
CDS-3UTR TCA 90 bp ACTCTCCCCTTGCCCCTGCAGCTGTTAAGTGATTTGCAAATTCTTTACAAAGCCGGTGGCGGTGGAATTTaGGCCACAGAGGCCGGTTGC +
Preference number: 4 (lower is better)
Translates to: TLPLPLQLLSDLQILYKAGGGGI*ATEAGC
Trigger: GCAACCGGCCTCTGTGGCTCAAATTCCACCGCCACC...GGCTTTGTAAAGAATTTGCAAATCACTTAACAGCTGCAGGGGCAAGGGGAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
CDS-3UTR GCA 90 bp ATAGAAATGAGAATCAAAGGTTTTAACTCATCTGATAGCACTGGGCACCCAATGCTCGCGGGCCGCTACTaGGCGTACTGGCGCGCCCTG +
Preference number: 4 (lower is better)
Translates to: IEMRIKGFNSSDSTGHPMLAGRY*AYWRAL
Trigger: CAGGGCGCGCCAGTACGCGCAGTAGCGGCCCGCGAG...CATTGGGTGCCCAGTGCTATCAGATGAGTTAAAACCTTTGATTCTCATTTCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000461503.2
CDS-3UTR GCA 90 bp CTTTACAAAGCCAAAGCACCAGTTTTACATTATCCCAGACACCTATGTAGACTACCGGGGCTACCCACCTaGCGACTCGCGGGCCGCTAC +
Preference number: 4 (lower is better)
Translates to: LYKAKAPVLHYPRHLCRLPGLPT*RLAGRY
Trigger: GTAGCGGCCCGCGAGTCGGCAGGTGGGTAGCCCCGG...TAGTCTACATAGGTGTCTGGGATAATGTAAAACTGGTGCTTTGGCTTTGTAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295743.8
CDS-3UTR GCA 90 bp ATAGAAATGAGAATCAAAGGTTTTAACTCATCTGATAGCACTGGGCACCCAATGCAGCGCTCCCGCCGCTaGCGCCTCGCGCACTCTCCA +
Preference number: 4 (lower is better)
Translates to: IEMRIKGFNSSDSTGHPMQRSRR*RLAHSP
Trigger: TGGAGAGTGCGCGAGGCGGCAGCGGCGGGAGCGCTG...CATTGGGTGCCCAGTGCTATCAGATGAGTTAAAACCTTTGATTCTCATTTCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
CDS-3UTR GCA 90 bp AAGCTTTGGCACCTTCTTTTAGAGAATTGCACAAAACAGGATGCATCAAGGTGGCGCAGCGCTGGCAAATaGGTCCCCGGCGTCGGTGTC +
Preference number: 4 (lower is better)
Translates to: KLWHLLLENCTKQDASRWRSAGK*VPGVGV
Trigger: GACACCGACGCCGGGGACGCATTTGCCAGCGCTGCG...CCACCTTGATGCATCCTGTTTTGTGCAATTCTCTAAAAGAAGGTGCCAAAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
CDS-3UTR GCA 90 bp ATAGAAATGAGAATCAAAGGTTTTAACTCATCTGATAGCACTGGGCACCCAATGGCTCCTGGGCCGAACTaGGCCCTCCCGGGTGGGCAC +
Preference number: 4 (lower is better)
Translates to: IEMRIKGFNSSDSTGHPMAPGPN*ALPGGH
Trigger: GTGCCCACCCGGGAGGGCGCAGTTCGGCCCAGGAGC...CATTGGGTGCCCAGTGCTATCAGATGAGTTAAAACCTTTGATTCTCATTTCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
CDS-3UTR GCA 90 bp GTAACAGCAAAATGTCTCCTTCTGAAACGGAAGGCACAGCCCTCTTTCAGAAGCCACAGGTCACCCATTTaGCCCCCTGGAAGCGCCAGT +
Preference number: 4 (lower is better)
Translates to: VTAKCLLLKRKAQPSFRSHRSPI*PPGSAS
Trigger: ACTGGCGCTTCCAGGGGGGCAAATGGGTGACCTGTG...GCTTCTGAAAGAGGGCTGTGCCTTCCGTTTCAGAAGGAGACATTTTGCTGTTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR CCA 90 bp ACTCTCCCCTTGCCCCTGCAGCTGTTAAGTGATTTGCAAATTCTTTACAAAGCCAGCTCAGGCTGTCCATaGAGTAGCGCGCAGTGGCCG +
Preference number: 4 (lower is better)
Translates to: TLPLPLQLLSDLQILYKASSGCP*SSAQWP
Trigger: CGGCCACTGCGCGCTACTCCATGGACAGCCTGAGCT...GGCTTTGTAAAGAATTTGCAAATCACTTAACAGCTGCAGGGGCAAGGGGAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
CDS-3UTR CCA 90 bp CTTTGGCACCTTCTTTTAGAGAATTGCACAAAACAGGATGCATCAAGGTGGAAGGCCCCAGCCGCCGCCTaGTACGGGAAGAGTGAGCAG +
Preference number: 4 (lower is better)
Translates to: LWHLLLENCTKQDASRWKAPAAA*YGKSEQ
Trigger: CTGCTCACTCTTCCCGTACCAGGCGGCGGCTGGGGC...CTTCCACCTTGATGCATCCTGTTTTGTGCAATTCTCTAAAAGAAGGTGCCAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
CDS-3UTR CCA 90 bp AAGCTTTGGCACCTTCTTTTAGAGAATTGCACAAAACAGGATGCATCAAGGTGGCCCTGGAAGCGCCAGTaGTTGGGGTCCGCCAGCACC +
Preference number: 4 (lower is better)
Translates to: KLWHLLLENCTKQDASRWPWKRQ*LGSAST
Trigger: GGTGCTGGCGGACCCCAACCACTGGCGCTTCCAGGG...CCACCTTGATGCATCCTGTTTTGTGCAATTCTCTAAAAGAAGGTGCCAAAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR CCA 90 bp AGGCCTAGCAAGTCTCAAGTGAGGCAATCCTGGACTAGGGCAAACATGGCTTGTGTGAAAGGAGGCCGTTaGTCTGTGGCACGGTTCTCT +
Preference number: 4 (lower is better)
Translates to: RPSKSQVRQSWTRANMACVKGGR*SVARFS
Trigger: AGAGAACCGTGCCACAGACCAACGGCCTCCTTTCAC...ACAAGCCATGTTTGCCCTAGTCCAGGATTGCCTCACTTGAGACTTGCTAGGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
CDS-3UTR TCA 90 bp TCAAAGGTTTTAACTCATCTGATAGCACTGGGCACCCAATGTTCACAGCCTGCTTCTAAGTCCAACTTCTaGGGAGAGGGGGCCGCGCTG +
Preference number: 4 (lower is better)
Translates to: SKVLTHLIALGTQCSQPASKSNF*GEGAAL
Trigger: CAGCGCGGCCCCCTCTCCTCAGAAGTTGGACTTAGA...AGCAGGCTGTGAACATTGGGTGCCCAGTGCTATCAGATGAGTTAAAACCTTTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
CDS-3UTR TCA 90 bp GATTTGCAAATTCTTTACAAAGCCAAAGCACCAGTTTTACATTATCCCAGACACGCCAGCTCCGACCCCTaGGGACCGGGGGACTGGAGG +
Preference number: 4 (lower is better)
Translates to: DLQILYKAKAPVLHYPRHASSDP*GPGDWR
Trigger: CCTCCAGTCCCCCGGTCCTCAGGGGTCGGAGCTGGC...GTGTCTGGGATAATGTAAAACTGGTGCTTTGGCTTTGTAAAGAATTTGCAAATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
CDS-3UTR TCA 90 bp CCTTCTGAAACGGAAGGCACAGCCCTCTTTCAGAAGCAAAACACCTTAACACTCTCCGGGAAGAAGGATTaGACGCCGTACCGACCTCCA +
Preference number: 4 (lower is better)
Translates to: PSETEGTALFQKQNTLTLSGKKD*TPYRPP
Trigger: TGGAGGTCGGTACGGCGTTCAATCCTTCTTCCCGGA...GAGTGTTAAGGTGTTTTGCTTCTGAAAGAGGGCTGTGCCTTCCGTTTCAGAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR GCA 90 bp AGGCCTAGCAAGTCTCAAGTGAGGCAATCCTGGACTAGGGCAAACATGGCTTGTAGCTGCTCCCCTAACTaGATGCTTTGCAAAGCGCAG +
Preference number: 4 (lower is better)
Translates to: RPSKSQVRQSWTRANMACSCSPN*MLCKAQ
Trigger: CTGCGCTTTGCAAAGCATGCAGTTAGGGGAGCAGCT...ACAAGCCATGTTTGCCCTAGTCCAGGATTGCCTCACTTGAGACTTGCTAGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
CDS-3UTR GCA 90 bp ATCAAGGTGGAAGGCAAACATCTTTTTGGCAACCTAGGCAAAGAAGACAACAAACGCAGCGCTGGCAAATaGGTCCCCGGCGTCGGTGTC +
Preference number: 4 (lower is better)
Translates to: IKVEGKHLFGNLGKEDNKRSAGK*VPGVGV
Trigger: GACACCGACGCCGGGGACGCATTTGCCAGCGCTGCG...TTTGTTGTCTTCTTTGCCTAGGTTGCCAAAAAGATGTTTGCCTTCCACCTTGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
CDS-3UTR CCA 90 bp CTTTGGCACCTTCTTTTAGAGAATTGCACAAAACAGGATGCATCAAGGTGGAAGCGCTACTGCGCGTACTaGCGCGCCCTGAATCCAGCG +
Preference number: 4 (lower is better)
Translates to: LWHLLLENCTKQDASRWKRYCAY*RALNPA
Trigger: CGCTGGATTCAGGGCGCGCCAGTACGCGCAGTAGCG...CTTCCACCTTGATGCATCCTGTTTTGTGCAATTCTCTAAAAGAAGGTGCCAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000461503.2
CDS-3UTR CCA 90 bp GGAAGGCACAGCCCTCTTTCAGAAGCAAAACACCTTAACACTCGGCTTCTATTTACCGCTGGGGAGGGTTaGCCACCTCTTCGCTCTGTT +
Preference number: 4 (lower is better)
Translates to: GRHSPLSEAKHLNTRLLFTAGEG*PPLRSV
Trigger: AACAGAGCGAAGAGGTGGCCAACCCTCCCCAGCGGT...AAATAGAAGCCGAGTGTTAAGGTGTTTTGCTTCTGAAAGAGGGCTGTGCCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR CCA 90 bp CCTTCTGAAACGGAAGGCACAGCCCTCTTTCAGAAGCAAAACACCTTAACACTCTTGGTCCCAGGTTGCTaGACAGGCGTGACAAGCCAC +
Preference number: 4 (lower is better)
Translates to: PSETEGTALFQKQNTLTLLVPGC*TGVTSH
Trigger: GTGGCTTGTCACGCCTGTCCAGCAACCTGGGACCAA...GAGTGTTAAGGTGTTTTGCTTCTGAAAGAGGGCTGTGCCTTCCGTTTCAGAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR CCA 90 bp ACTGGGCACCCAATGTTCACAGCCTGCTTCTTTGAAGGGTTAGTGTCTCCCCAAAGGAAAGGTTGGGTCTaGGTAATACCCCAGGGCATG +
Preference number: 4 (lower is better)
Translates to: TGHPMFTACFFEGLVSPQRKGWV*VIPQGM
Trigger: CATGCCCTGGGGTATTACCCAGACCCAACCTTTCCT...TTGGGGAGACACTAACCCTTCAAAGAAGCAGGCTGTGAACATTGGGTGCCCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR GCA 90 bp CTTTACAAAGCCAAAGCACCAGTTTTACATTATCCCAGACACCTATGTAGACTACCCCGGCTTGGCCACTaGCGCAGCGCTGGCAAATGC +
Preference number: 4 (lower is better)
Translates to: LYKAKAPVLHYPRHLCRLPRLGH*RSAGKC
Trigger: GCATTTGCCAGCGCTGCGGCAGTGGCCAAGCCGGGG...TAGTCTACATAGGTGTCTGGGATAATGTAAAACTGGTGCTTTGGCTTTGTAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
CDS-3UTR GCA 90 bp GGAAGGCACAGCCCTCTTTCAGAAGCAAAACACCTTAACACTCGGCTTCTATTTTCCCCACCCTGCCATTaGAGGAAAGGTTGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: GRHSPLSEAKHLNTRLLFSPPCH*RKGWVW
Trigger: CCAGACCCAACCTTTCCTGCAATGGCAGGGTGGGGA...AAATAGAAGCCGAGTGTTAAGGTGTTTTGCTTCTGAAAGAGGGCTGTGCCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR GCA 90 bp TCAAAGGTTTTAACTCATCTGATAGCACTGGGCACCCAATGTTCACAGCCTGCTTCGACCTCCCCACCCTaGCATTGCAGGAAAGGTTGG +
Preference number: 4 (lower is better)
Translates to: SKVLTHLIALGTQCSQPASTSPP*HCRKGW
Trigger: CCAACCTTTCCTGCAATGGCAGGGTGGGGAGGTCGA...AGCAGGCTGTGAACATTGGGTGCCCAGTGCTATCAGATGAGTTAAAACCTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR GCA 90 bp CAAAACAGGATGCATCAAGGTGGAAGGCAAACATCTTTTTGGCAACCTAGGCAACTTCCTCGTACCTCTTaGTCCTCAGGACCCCCACCC +
Preference number: 4 (lower is better)
Translates to: QNRMHQGGRQTSFWQPRQLPRTS*SSGPPP
Trigger: GGGTGGGGGTCCTGAGGAGCAAGAGGTACGAGGAAG...TTGCCTAGGTTGCCAAAAAGATGTTTGCCTTCCACCTTGATGCATCCTGTTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000461503.2
CDS-3UTR CCA 90 bp GGATGCATCAAGGTGGAAGGCAAACATCTTTTTGGCAACCTAGGCAAAGAAGACGAGGCCGTTGGTCTGTaGCACGGTTCTCTCGCCATT +
Preference number: 4 (lower is better)
Translates to: GCIKVEGKHLFGNLGKEDEAVGL*HGSLAI
Trigger: AATGGCGAGAGAACCGTGCCACAGACCAACGGCCTC...GTCTTCTTTGCCTAGGTTGCCAAAAAGATGTTTGCCTTCCACCTTGATGCATCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR CCA 90 bp GCAGAATGTAACAGCAAAATGTCTCCTTCTGAAACGGAAGGCACAGCCCTCTTTGAGGCCGTTGGTCTGTaGCACGGTTCTCTCGCCATT +
Preference number: 4 (lower is better)
Translates to: AECNSKMSPSETEGTALFEAVGL*HGSLAI
Trigger: AATGGCGAGAGAACCGTGCCACAGACCAACGGCCTC...AAAGAGGGCTGTGCCTTCCGTTTCAGAAGGAGACATTTTGCTGTTACATTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR CCA 90 bp CCTTCTGAAACGGAAGGCACAGCCCTCTTTCAGAAGCAAAACACCTTAACACTCACCTCTTCGCTCTGTTaGGGTGAAAGGAGGCCGTTG +
Preference number: 4 (lower is better)
Translates to: PSETEGTALFQKQNTLTLTSSLC*GERRPL
Trigger: CAACGGCCTCCTTTCACCCCAACAGAGCGAAGAGGT...GAGTGTTAAGGTGTTTTGCTTCTGAAAGAGGGCTGTGCCTTCCGTTTCAGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR CCA 90 bp AAGCTTTGGCACCTTCTTTTAGAGAATTGCACAAAACAGGATGCATCAAGGTGGGTGACAAGCCACCGCTaGGGAGGGTTGGCCACCTCT +
Preference number: 4 (lower is better)
Translates to: KLWHLLLENCTKQDASRWVTSHR*GGLATS
Trigger: AGAGGTGGCCAACCCTCCCCAGCGGTGGCTTGTCAC...CCACCTTGATGCATCCTGTTTTGTGCAATTCTCTAAAAGAAGGTGCCAAAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR CCA 90 bp CCTTCTGAAACGGAAGGCACAGCCCTCTTTCAGAAGCAAAACACCTTAACACTCCAGTGGGGCTTGTTCTaGAGGTCCATGGTAGTCCAG +
Preference number: 4 (lower is better)
Translates to: PSETEGTALFQKQNTLTLQWGLF*RSMVVQ
Trigger: CTGGACTACCATGGACCTCCAGAACAAGCCCCACTG...GAGTGTTAAGGTGTTTTGCTTCTGAAAGAGGGCTGTGCCTTCCGTTTCAGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR CCA 90 bp GTAACAGCAAAATGTCTCCTTCTGAAACGGAAGGCACAGCCCTCTTTCAGAAGCCAGTGGGGCTTGTTCTaGAGGTCCATGGTAGTCCAG +
Preference number: 4 (lower is better)
Translates to: VTAKCLLLKRKAQPSFRSQWGLF*RSMVVQ
Trigger: CTGGACTACCATGGACCTCCAGAACAAGCCCCACTG...GCTTCTGAAAGAGGGCTGTGCCTTCCGTTTCAGAAGGAGACATTTTGCTGTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR CCA 90 bp ACTGGGCACCCAATGTTCACAGCCTGCTTCTTTGAAGGGTTAGTGTCTCCCCAACAAGTGAGGCAATCCTaGACTAGGGCAAACATGGCT +
Preference number: 4 (lower is better)
Translates to: TGHPMFTACFFEGLVSPQQVRQS*TRANMA
Trigger: AGCCATGTTTGCCCTAGTCCAGGATTGCCTCACTTG...TTGGGGAGACACTAACCCTTCAAAGAAGCAGGCTGTGAACATTGGGTGCCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
CDS-3UTR GCA 90 bp GGAAGGCACAGCCCTCTTTCAGAAGCAAAACACCTTAACACTCGGCTTCTATTTCCTCGCAGGAGAGACTaGCGGAAAACTTCTTGGACG +
Preference number: 4 (lower is better)
Translates to: GRHSPLSEAKHLNTRLLFPRRRD*RKTSWT
Trigger: CGTCCAAGAAGTTTTCCGGCAGTCTCTCCTGCGAGG...AAATAGAAGCCGAGTGTTAAGGTGTTTTGCTTCTGAAAGAGGGCTGTGCCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
CDS-3UTR GCA 90 bp CTTTGGCACCTTCTTTTAGAGAATTGCACAAAACAGGATGCATCAAGGTGGAAGCACAGGTCACCCATTTaGCCCCCTGGAAGCGCCAGT +
Preference number: 4 (lower is better)
Translates to: LWHLLLENCTKQDASRWKHRSPI*PPGSAS
Trigger: ACTGGCGCTTCCAGGGGGGCAAATGGGTGACCTGTG...CTTCCACCTTGATGCATCCTGTTTTGTGCAATTCTCTAAAAGAAGGTGCCAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR CCA 90 bp ATAGAAATGAGAATCAAAGGTTTTAACTCATCTGATAGCACTGGGCACCCAATGCGCTACTGCGCGTACTaGCGCGCCCTGAATCCAGCG +
Preference number: 4 (lower is better)
Translates to: IEMRIKGFNSSDSTGHPMRYCAY*RALNPA
Trigger: CGCTGGATTCAGGGCGCGCCAGTACGCGCAGTAGCG...CATTGGGTGCCCAGTGCTATCAGATGAGTTAAAACCTTTGATTCTCATTTCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000461503.2
CDS-3UTR CCA 90 bp ATAGAAATGAGAATCAAAGGTTTTAACTCATCTGATAGCACTGGGCACCCAATGAGCGCAGACGGCAGCTaGCTGCTTCCTCTCCTCCGG +
Preference number: 4 (lower is better)
Translates to: IEMRIKGFNSSDSTGHPMSADGS*LLPLLR
Trigger: CCGGAGGAGAGGAAGCAGCCAGCTGCCGTCTGCGCT...CATTGGGTGCCCAGTGCTATCAGATGAGTTAAAACCTTTGATTCTCATTTCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295743.8
CDS-3UTR CCA 90 bp GATTTGCAAATTCTTTACAAAGCCAAAGCACCAGTTTTACATTATCCCAGACACCCACTGCCGCAGCGCTaGCAAATGCGTCCCCGGCGT +
Preference number: 4 (lower is better)
Translates to: DLQILYKAKAPVLHYPRHPLPQR*QMRPRR
Trigger: ACGCCGGGGACGCATTTGCCAGCGCTGCGGCAGTGG...GTGTCTGGGATAATGTAAAACTGGTGCTTTGGCTTTGTAAAGAATTTGCAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
CDS-3UTR CCA 90 bp CTTTACAAAGCCAAAGCACCAGTTTTACATTATCCCAGACACCTATGTAGACTAGGAAGCGCCAGTGGTTaGGGTCCGCCAGCACCACCT +
Preference number: 4 (lower is better)
Translates to: LYKAKAPVLHYPRHLCRLGSASG*GPPAPP
Trigger: AGGTGGTGCTGGCGGACCCCAACCACTGGCGCTTCC...TAGTCTACATAGGTGTCTGGGATAATGTAAAACTGGTGCTTTGGCTTTGTAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
CDS-3UTR CCA 90 bp GCAGAATGTAACAGCAAAATGTCTCCTTCTGAAACGGAAGGCACAGCCCTCTTTACCTCTTCGCTCTGTTaGGGTGAAAGGAGGCCGTTG +
Preference number: 4 (lower is better)
Translates to: AECNSKMSPSETEGTALFTSSLC*GERRPL
Trigger: CAACGGCCTCCTTTCACCCCAACAGAGCGAAGAGGT...AAAGAGGGCTGTGCCTTCCGTTTCAGAAGGAGACATTTTGCTGTTACATTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR TCA 90 bp ATGCTAGGTTTGTTTCAGTTACCTGCAGCAATCAAAAAGCTTTGGCACCTTCTTTCTAAGTCCAACTTCTaGGGAGAGGGGGCCGCGCTG +
Preference number: 4 (lower is better)
Translates to: MLGLFQLPAAIKKLWHLLSKSNF*GEGAAL
Trigger: CAGCGCGGCCCCCTCTCCTCAGAAGTTGGACTTAGA...AAGAAGGTGCCAAAGCTTTTTGATTGCTGCAGGTAACTGAAACAAACCTAGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
CDS-3UTR TCA 90 bp AAGCTTTGGCACCTTCTTTTAGAGAATTGCACAAAACAGGATGCATCAAGGTGGTCCGGGAAGAAGGATTaGACGCCGTACCGACCTCCA +
Preference number: 4 (lower is better)
Translates to: KLWHLLLENCTKQDASRWSGKKD*TPYRPP
Trigger: TGGAGGTCGGTACGGCGTTCAATCCTTCTTCCCGGA...CCACCTTGATGCATCCTGTTTTGTGCAATTCTCTAAAAGAAGGTGCCAAAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR TCA 90 bp GCAGAATGTAACAGCAAAATGTCTCCTTCTGAAACGGAAGGCACAGCCCTCTTTCACAGCCTGCTTCTTTaGAGGGTTAGTGTCTCCCCA +
Preference number: 4 (lower is better)
Translates to: AECNSKMSPSETEGTALFHSLLL*RVSVSP
Trigger: TGGGGAGACACTAACCCTTCAAAGAAGCAGGCTGTG...AAAGAGGGCTGTGCCTTCCGTTTCAGAAGGAGACATTTTGCTGTTACATTCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR TCA 90 bp AGGCCTAGCAAGTCTCAAGTGAGGCAATCCTGGACTAGGGCAAACATGGCTTGTCACAAAAGCTTTTCTTaGCTCCTGGGCCTAGTATCT +
Preference number: 4 (lower is better)
Translates to: RPSKSQVRQSWTRANMACHKSFS*LLGLVS
Trigger: AGATACTAGGCCCAGGAGTCAAGAAAAGCTTTTGTG...ACAAGCCATGTTTGCCCTAGTCCAGGATTGCCTCACTTGAGACTTGCTAGGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
CDS-3UTR TCA 90 bp GCAGAATGTAACAGCAAAATGTCTCCTTCTGAAACGGAAGGCACAGCCCTCTTTCTAGCAAGTCTCAAGTaGGGCAATCCTGGACTAGGG +
Preference number: 4 (lower is better)
Translates to: AECNSKMSPSETEGTALFLASLK*GNPGLG
Trigger: CCCTAGTCCAGGATTGCCTCACTTGAGACTTGCTAG...AAAGAGGGCTGTGCCTTCCGTTTCAGAAGGAGACATTTTGCTGTTACATTCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
CDS-3UTR TCA 90 bp ACTCTCCCCTTGCCCCTGCAGCTGTTAAGTGATTTGCAAATTCTTTACAAAGCCCTAGCAAGTCTCAAGTaGGGCAATCCTGGACTAGGG +
Preference number: 4 (lower is better)
Translates to: TLPLPLQLLSDLQILYKALASLK*GNPGLG
Trigger: CCCTAGTCCAGGATTGCCTCACTTGAGACTTGCTAG...GGCTTTGTAAAGAATTTGCAAATCACTTAACAGCTGCAGGGGCAAGGGGAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
CDS-3UTR TCA 90 bp ACTCTCCCCTTGCCCCTGCAGCTGTTAAGTGATTTGCAAATTCTTTACAAAGCCCCTCCAGGGACAATCTaGTGGGATCTAGGAGAATCC +
Preference number: 4 (lower is better)
Translates to: TLPLPLQLLSDLQILYKAPPGTI*WDLGES
Trigger: GGATTCTCCTAGATCCCATCAGATTGTCCCTGGAGG...GGCTTTGTAAAGAATTTGCAAATCACTTAACAGCTGCAGGGGCAAGGGGAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000449599.4
CDS-3UTR TCA 90 bp CTTTGGCACCTTCTTTTAGAGAATTGCACAAAACAGGATGCATCAAGGTGGAAGGGAAGGAAAGCGCCGTaGGTTGGAAAGCAGGAGGTG +
Preference number: 4 (lower is better)
Translates to: LWHLLLENCTKQDASRWKGRKAP*VGKQEV
Trigger: CACCTCCTGCTTTCCAACTCACGGCGCTTTCCTTCC...CTTCCACCTTGATGCATCCTGTTTTGTGCAATTCTCTAAAAGAAGGTGCCAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461503.2
CDS-3UTR GCA 90 bp CAAATTCTTTACAAAGCCAAAGCACCAGTTTTACATTATCCCAGACACCTATGTCAGACGGCAGCTGGCTaGTTCCTCTCCTCCGGTGGC +
Preference number: 4 (lower is better)
Translates to: QILYKAKAPVLHYPRHLCQTAAG*FLSSGG
Trigger: GCCACCGGAGGAGAGGAAGCAGCCAGCTGCCGTCTG...ACATAGGTGTCTGGGATAATGTAAAACTGGTGCTTTGGCTTTGTAAAGAATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295743.8
CDS-3UTR GCA 90 bp ATCAAGGTGGAAGGCAAACATCTTTTTGGCAACCTAGGCAAAGAAGACAACAAACACAGGTCACCCATTTaGCCCCCTGGAAGCGCCAGT +
Preference number: 4 (lower is better)
Translates to: IKVEGKHLFGNLGKEDNKHRSPI*PPGSAS
Trigger: ACTGGCGCTTCCAGGGGGGCAAATGGGTGACCTGTG...TTTGTTGTCTTCTTTGCCTAGGTTGCCAAAAAGATGTTTGCCTTCCACCTTGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR GCA 90 bp AAGCTTTGGCACCTTCTTTTAGAGAATTGCACAAAACAGGATGCATCAAGGTGGTCCCCACCCTGCCATTaGAGGAAAGGTTGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: KLWHLLLENCTKQDASRWSPPCH*RKGWVW
Trigger: CCAGACCCAACCTTTCCTGCAATGGCAGGGTGGGGA...CCACCTTGATGCATCCTGTTTTGTGCAATTCTCTAAAAGAAGGTGCCAAAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR GCA 90 bp TCAAAGGTTTTAACTCATCTGATAGCACTGGGCACCCAATGTTCACAGCCTGCTGGTGACTCCTTAGCTTaGTCTCTCCTGAGTCCCACT +
Preference number: 4 (lower is better)
Translates to: SKVLTHLIALGTQCSQPAGDSLA*SLLSPT
Trigger: AGTGGGACTCAGGAGAGAGCAAGCTAAGGAGTCACC...AGCAGGCTGTGAACATTGGGTGCCCAGTGCTATCAGATGAGTTAAAACCTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
CDS-3UTR CCA 90 bp CTTTACAAAGCCAAAGCACCAGTTTTACATTATCCCAGACACCTATGTAGACTAAGCTCAGGCTGTCCATaGAGTAGCGCGCAGTGGCCG +
Preference number: 4 (lower is better)
Translates to: LYKAKAPVLHYPRHLCRLSSGCP*SSAQWP
Trigger: CGGCCACTGCGCGCTACTCCATGGACAGCCTGAGCT...TAGTCTACATAGGTGTCTGGGATAATGTAAAACTGGTGCTTTGGCTTTGTAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
CDS-3UTR CCA 90 bp GGATGCATCAAGGTGGAAGGCAAACATCTTTTTGGCAACCTAGGCAAAGAAGACTCAGTTTGGTGGCGGTaGAATTTGAGCCACAGAGGC +
Preference number: 4 (lower is better)
Translates to: GCIKVEGKHLFGNLGKEDSVWWR*NLSHRG
Trigger: GCCTCTGTGGCTCAAATTCCACCGCCACCAAACTGA...GTCTTCTTTGCCTAGGTTGCCAAAAAGATGTTTGCCTTCCACCTTGATGCATCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
CDS-3UTR CCA 90 bp ATGCATCAAGGTGGAAGGCAAACATCTTTTTGGCAACCTAGGCAAAGAAGACAAGAGGCCGTTGGTCTGTaGCACGGTTCTCTCGCCATT +
Preference number: 4 (lower is better)
Translates to: MHQGGRQTSFWQPRQRRQEAVGL*HGSLAI
Trigger: AATGGCGAGAGAACCGTGCCACAGACCAACGGCCTC...TTGTCTTCTTTGCCTAGGTTGCCAAAAAGATGTTTGCCTTCCACCTTGATGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR CCA 90 bp ATGCTAGGTTTGTTTCAGTTACCTGCAGCAATCAAAAAGCTTTGGCACCTTCTTACCGCTGGGGAGGGTTaGCCACCTCTTCGCTCTGTT +
Preference number: 4 (lower is better)
Translates to: MLGLFQLPAAIKKLWHLLTAGEG*PPLRSV
Trigger: AACAGAGCGAAGAGGTGGCCAACCCTCCCCAGCGGT...AAGAAGGTGCCAAAGCTTTTTGATTGCTGCAGGTAACTGAAACAAACCTAGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR CCA 90 bp ATAGAAATGAGAATCAAAGGTTTTAACTCATCTGATAGCACTGGGCACCCAATGGTGACAAGCCACCGCTaGGGAGGGTTGGCCACCTCT +
Preference number: 4 (lower is better)
Translates to: IEMRIKGFNSSDSTGHPMVTSHR*GGLATS
Trigger: AGAGGTGGCCAACCCTCCCCAGCGGTGGCTTGTCAC...CATTGGGTGCCCAGTGCTATCAGATGAGTTAAAACCTTTGATTCTCATTTCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR CCA 90 bp AAGCTTTGGCACCTTCTTTTAGAGAATTGCACAAAACAGGATGCATCAAGGTGGTTGGTCCCAGGTTGCTaGACAGGCGTGACAAGCCAC +
Preference number: 4 (lower is better)
Translates to: KLWHLLLENCTKQDASRWLVPGC*TGVTSH
Trigger: GTGGCTTGTCACGCCTGTCCAGCAACCTGGGACCAA...CCACCTTGATGCATCCTGTTTTGTGCAATTCTCTAAAAGAAGGTGCCAAAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR CCA 90 bp CCTTCTGAAACGGAAGGCACAGCCCTCTTTCAGAAGCAAAACACCTTAACACTCGTTAGGGAGAGGGGATaGCGCAAGAAGAGGATGAAA +
Preference number: 4 (lower is better)
Translates to: PSETEGTALFQKQNTLTLVRERG*RKKRMK
Trigger: TTTCATCCTCTTCTTGCGCCATCCCCTCTCCCTAAC...GAGTGTTAAGGTGTTTTGCTTCTGAAAGAGGGCTGTGCCTTCCGTTTCAGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
CDS-3UTR CCA 90 bp GTAACAGCAAAATGTCTCCTTCTGAAACGGAAGGCACAGCCCTCTTTCAGAAGCTTGGAAAGCAGGAGGTaGAAACTAACCCAGAAGCCC +
Preference number: 4 (lower is better)
Translates to: VTAKCLLLKRKAQPSFRSLESRR*KLTQKP
Trigger: GGGCTTCTGGGTTAGTTTCCACCTCCTGCTTTCCAA...GCTTCTGAAAGAGGGCTGTGCCTTCCGTTTCAGAAGGAGACATTTTGCTGTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461503.2
CDS-3UTR CCA 90 bp GCAGAATGTAACAGCAAAATGTCTCCTTCTGAAACGGAAGGCACAGCCCTCTTTGAAAGCGCCGTGAGTTaGAAAGCAGGAGGTGGAAAC +
Preference number: 4 (lower is better)
Translates to: AECNSKMSPSETEGTALFESAVS*KAGGGN
Trigger: GTTTCCACCTCCTGCTTTCCAACTCACGGCGCTTTC...AAAGAGGGCTGTGCCTTCCGTTTCAGAAGGAGACATTTTGCTGTTACATTCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461503.2
CDS-3UTR TCA 90 bp CAGAGGCCTAGCAAGTCTCAAGTGAGGCAATCCTGGACTAGGGCAAACATGGCTCGCCTTTGTTATTGGTaGGTTTTAATTTCCCGAATG +
Preference number: 4 (lower is better)
Translates to: QRPSKSQVRQSWTRANMARLCYW*VLISRM
Trigger: CATTCGGGAAATTAAAACTCACCAATAACAAAGGCG...AGCCATGTTTGCCCTAGTCCAGGATTGCCTCACTTGAGACTTGCTAGGCCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
CDS-3UTR TCA 90 bp AGGCCTAGCAAGTCTCAAGTGAGGCAATCCTGGACTAGGGCAAACATGGCTTGTCAGATTCATAGGAACTaGTGTCTAGTTTGTTGGTCC +
Preference number: 4 (lower is better)
Translates to: RPSKSQVRQSWTRANMACQIHRN*CLVCWS
Trigger: GGACCAACAAACTAGACATCAGTTCCTATGAATCTG...ACAAGCCATGTTTGCCCTAGTCCAGGATTGCCTCACTTGAGACTTGCTAGGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
CDS-3UTR TCA 90 bp TCAAAGGTTTTAACTCATCTGATAGCACTGGGCACCCAATGTTCACAGCCTGCTAGGGCATGGGATGTCTaGAGGGGCAAGGATTTAATG +
Preference number: 4 (lower is better)
Translates to: SKVLTHLIALGTQCSQPARAWDV*RGKDLM
Trigger: CATTAAATCCTTGCCCCTTCAGACATCCCATGCCCT...AGCAGGCTGTGAACATTGGGTGCCCAGTGCTATCAGATGAGTTAAAACCTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR GCA 90 bp CAAATTCTTTACAAAGCCAAAGCACCAGTTTTACATTATCCCAGACACCTATGTGCCACAGAGGCCGGTTaGACAGGTAGACGTGGGCAC +
Preference number: 4 (lower is better)
Translates to: QILYKAKAPVLHYPRHLCATEAG*TGRRGH
Trigger: GTGCCCACGTCTACCTGTGCAACCGGCCTCTGTGGC...ACATAGGTGTCTGGGATAATGTAAAACTGGTGCTTTGGCTTTGTAAAGAATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
CDS-3UTR GCA 90 bp ATCAAGGTGGAAGGCAAACATCTTTTTGGCAACCTAGGCAAAGAAGACAACAAATCGACCTCCCCACCCTaGCATTGCAGGAAAGGTTGG +
Preference number: 4 (lower is better)
Translates to: IKVEGKHLFGNLGKEDNKSTSPP*HCRKGW
Trigger: CCAACCTTTCCTGCAATGGCAGGGTGGGGAGGTCGA...TTTGTTGTCTTCTTTGCCTAGGTTGCCAAAAAGATGTTTGCCTTCCACCTTGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR CCA 90 bp AGCAAAATGTCTCCTTCTGAAACGGAAGGCACAGCCCTCTTTCAGAAGCAAAACCTTCCTCTCCTCCGGTaGCCTTATTATAAAGGCAGG +
Preference number: 4 (lower is better)
Translates to: SKMSPSETEGTALFQKQNLPLLR*PYYKGR
Trigger: CCTGCCTTTATAATAAGGCCACCGGAGGAGAGGAAG...GTTTTGCTTCTGAAAGAGGGCTGTGCCTTCCGTTTCAGAAGGAGACATTTTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295743.8
CDS-3UTR CCA 90 bp ATGCATCAAGGTGGAAGGCAAACATCTTTTTGGCAACCTAGGCAAAGAAGACAAGTGAAAGGAGGCCGTTaGTCTGTGGCACGGTTCTCT +
Preference number: 4 (lower is better)
Translates to: MHQGGRQTSFWQPRQRRQVKGGR*SVARFS
Trigger: AGAGAACCGTGCCACAGACCAACGGCCTCCTTTCAC...TTGTCTTCTTTGCCTAGGTTGCCAAAAAGATGTTTGCCTTCCACCTTGATGCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR CCA 90 bp ATAGAAATGAGAATCAAAGGTTTTAACTCATCTGATAGCACTGGGCACCCAATGACCGCTGGGGAGGGTTaGCCACCTCTTCGCTCTGTT +
Preference number: 4 (lower is better)
Translates to: IEMRIKGFNSSDSTGHPMTAGEG*PPLRSV
Trigger: AACAGAGCGAAGAGGTGGCCAACCCTCCCCAGCGGT...CATTGGGTGCCCAGTGCTATCAGATGAGTTAAAACCTTTGATTCTCATTTCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR CCA 90 bp ATCAAGGTGGAAGGCAAACATCTTTTTGGCAACCTAGGCAAAGAAGACAACAAATTGGTCCCAGGTTGCTaGACAGGCGTGACAAGCCAC +
Preference number: 4 (lower is better)
Translates to: IKVEGKHLFGNLGKEDNKLVPGC*TGVTSH
Trigger: GTGGCTTGTCACGCCTGTCCAGCAACCTGGGACCAA...TTTGTTGTCTTCTTTGCCTAGGTTGCCAAAAAGATGTTTGCCTTCCACCTTGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR CCA 90 bp CAAAACAGGATGCATCAAGGTGGAAGGCAAACATCTTTTTGGCAACCTAGGCAACTTCAGAGAACACAGTaGGGCTTGTTCTGGAGGTCC +
Preference number: 4 (lower is better)
Translates to: QNRMHQGGRQTSFWQPRQLQRTQ*GLFWRS
Trigger: GGACCTCCAGAACAAGCCCCACTGTGTTCTCTGAAG...TTGCCTAGGTTGCCAAAAAGATGTTTGCCTTCCACCTTGATGCATCCTGTTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR CCA 90 bp ACTCTCCCCTTGCCCCTGCAGCTGTTAAGTGATTTGCAAATTCTTTACAAAGCCCAAGTGAGGCAATCCTaGACTAGGGCAAACATGGCT +
Preference number: 4 (lower is better)
Translates to: TLPLPLQLLSDLQILYKAQVRQS*TRANMA
Trigger: AGCCATGTTTGCCCTAGTCCAGGATTGCCTCACTTG...GGCTTTGTAAAGAATTTGCAAATCACTTAACAGCTGCAGGGGCAAGGGGAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
CDS-3UTR CCA 90 bp ACTCTCCCCTTGCCCCTGCAGCTGTTAAGTGATTTGCAAATTCTTTACAAAGCCGTTAGGGAGAGGGGATaGCGCAAGAAGAGGATGAAA +
Preference number: 4 (lower is better)
Translates to: TLPLPLQLLSDLQILYKAVRERG*RKKRMK
Trigger: TTTCATCCTCTTCTTGCGCCATCCCCTCTCCCTAAC...GGCTTTGTAAAGAATTTGCAAATCACTTAACAGCTGCAGGGGCAAGGGGAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
CDS-3UTR TCA 90 bp ACTGGGCACCCAATGTTCACAGCCTGCTTCTTTGAAGGGTTAGTGTCTCCCCAACGCCTTTGTTATTGGTaGGTTTTAATTTCCCGAATG +
Preference number: 4 (lower is better)
Translates to: TGHPMFTACFFEGLVSPQRLCYW*VLISRM
Trigger: CATTCGGGAAATTAAAACTCACCAATAACAAAGGCG...TTGGGGAGACACTAACCCTTCAAAGAAGCAGGCTGTGAACATTGGGTGCCCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR TCA 90 bp GGAAGGCACAGCCCTCTTTCAGAAGCAAAACACCTTAACACTCGGCTTCTATTTAAAAGTCTGGGTCTTTaGGGGCTCATTCAAGTCCTC +
Preference number: 4 (lower is better)
Translates to: GRHSPLSEAKHLNTRLLFKSLGL*GLIQVL
Trigger: GAGGACTTGAATGAGCCCTCAAAGACCCAGACTTTT...AAATAGAAGCCGAGTGTTAAGGTGTTTTGCTTCTGAAAGAGGGCTGTGCCTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR TCA 90 bp CCTTCTGAAACGGAAGGCACAGCCCTCTTTCAGAAGCAAAACACCTTAACACTCTGGAATCTAGAGATTTaGTGGAAGGGGGTGTCTCTA +
Preference number: 4 (lower is better)
Translates to: PSETEGTALFQKQNTLTLWNLEI*WKGVSL
Trigger: TAGAGACACCCCCTTCCATCAAATCTCTAGATTCCA...GAGTGTTAAGGTGTTTTGCTTCTGAAAGAGGGCTGTGCCTTCCGTTTCAGAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR GCA 90 bp ATGCTAGGTTTGTTTCAGTTACCTGCAGCAATCAAAAAGCTTTGGCACCTTCTTGCTCCCCTAACTGCATaGTTTGCAAAGCGCAGACGG +
Preference number: 4 (lower is better)
Translates to: MLGLFQLPAAIKKLWHLLAPLTA*FAKRRR
Trigger: CCGTCTGCGCTTTGCAAAGCATGCAGTTAGGGGAGC...AAGAAGGTGCCAAAGCTTTTTGATTGCTGCAGGTAACTGAAACAAACCTAGCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
CDS-3UTR GCA 90 bp CTTTGGCACCTTCTTTTAGAGAATTGCACAAAACAGGATGCATCAAGGTGGAAGGAGCTCACCAAGAGCTaGTCCCCTAACTGCATGCTT +
Preference number: 4 (lower is better)
Translates to: LWHLLLENCTKQDASRWKELTKS*SPNCML
Trigger: AAGCATGCAGTTAGGGGAGCAGCTCTTGGTGAGCTC...CTTCCACCTTGATGCATCCTGTTTTGTGCAATTCTCTAAAAGAAGGTGCCAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
CDS-3UTR GCA 90 bp ATGCTAGGTTTGTTTCAGTTACCTGCAGCAATCAAAAAGCTTTGGCACCTTCTTCCTCGCAGGAGAGACTaGCGGAAAACTTCTTGGACG +
Preference number: 4 (lower is better)
Translates to: MLGLFQLPAAIKKLWHLLPRRRD*RKTSWT
Trigger: CGTCCAAGAAGTTTTCCGGCAGTCTCTCCTGCGAGG...AAGAAGGTGCCAAAGCTTTTTGATTGCTGCAGGTAACTGAAACAAACCTAGCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
CDS-3UTR GCA 90 bp TCAAAGGTTTTAACTCATCTGATAGCACTGGGCACCCAATGTTCACAGCCTGCTTGTTATTGTCGGCTTTaGCACAGGTCACCCATTTGC +
Preference number: 4 (lower is better)
Translates to: SKVLTHLIALGTQCSQPACYCRL*HRSPIC
Trigger: GCAAATGGGTGACCTGTGGCAAAGCCGACAATAACA...AGCAGGCTGTGAACATTGGGTGCCCAGTGCTATCAGATGAGTTAAAACCTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR GCA 90 bp GCAGAATGTAACAGCAAAATGTCTCCTTCTGAAACGGAAGGCACAGCCCTCTTTTGTTATTGTCGGCTTTaGCACAGGTCACCCATTTGC +
Preference number: 4 (lower is better)
Translates to: AECNSKMSPSETEGTALFCYCRL*HRSPIC
Trigger: GCAAATGGGTGACCTGTGGCAAAGCCGACAATAACA...AAAGAGGGCTGTGCCTTCCGTTTCAGAAGGAGACATTTTGCTGTTACATTCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR GCA 90 bp ATAGAAATGAGAATCAAAGGTTTTAACTCATCTGATAGCACTGGGCACCCAATGTCCCCACCCTGCCATTaGAGGAAAGGTTGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: IEMRIKGFNSSDSTGHPMSPPCH*RKGWVW
Trigger: CCAGACCCAACCTTTCCTGCAATGGCAGGGTGGGGA...CATTGGGTGCCCAGTGCTATCAGATGAGTTAAAACCTTTGATTCTCATTTCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR GCA 90 bp CTTTACAAAGCCAAAGCACCAGTTTTACATTATCCCAGACACCTATGTAGACTATCGACCTCCCCACCCTaGCATTGCAGGAAAGGTTGG +
Preference number: 4 (lower is better)
Translates to: LYKAKAPVLHYPRHLCRLSTSPP*HCRKGW
Trigger: CCAACCTTTCCTGCAATGGCAGGGTGGGGAGGTCGA...TAGTCTACATAGGTGTCTGGGATAATGTAAAACTGGTGCTTTGGCTTTGTAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
CDS-3UTR GCA 90 bp CTTTGGCACCTTCTTTTAGAGAATTGCACAAAACAGGATGCATCAAGGTGGAAGGGTGACTCCTTAGCTTaGTCTCTCCTGAGTCCCACT +
Preference number: 4 (lower is better)
Translates to: LWHLLLENCTKQDASRWKGDSLA*SLLSPT
Trigger: AGTGGGACTCAGGAGAGAGCAAGCTAAGGAGTCACC...CTTCCACCTTGATGCATCCTGTTTTGTGCAATTCTCTAAAAGAAGGTGCCAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
CDS-3UTR CCA 90 bp ATCAAGGTGGAAGGCAAACATCTTTTTGGCAACCTAGGCAAAGAAGACAACAAAGTGAAAGGAGGCCGTTaGTCTGTGGCACGGTTCTCT +
Preference number: 4 (lower is better)
Translates to: IKVEGKHLFGNLGKEDNKVKGGR*SVARFS
Trigger: AGAGAACCGTGCCACAGACCAACGGCCTCCTTTCAC...TTTGTTGTCTTCTTTGCCTAGGTTGCCAAAAAGATGTTTGCCTTCCACCTTGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR CCA 90 bp AAGCTTTGGCACCTTCTTTTAGAGAATTGCACAAAACAGGATGCATCAAGGTGGAGGAAAGGTTGGGTCTaGGTAATACCCCAGGGCATG +
Preference number: 4 (lower is better)
Translates to: KLWHLLLENCTKQDASRWRKGWV*VIPQGM
Trigger: CATGCCCTGGGGTATTACCCAGACCCAACCTTTCCT...CCACCTTGATGCATCCTGTTTTGTGCAATTCTCTAAAAGAAGGTGCCAAAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR CCA 90 bp AAGCTTTGGCACCTTCTTTTAGAGAATTGCACAAAACAGGATGCATCAAGGTGGCTTCAGAGAACACAGTaGGGCTTGTTCTGGAGGTCC +
Preference number: 4 (lower is better)
Translates to: KLWHLLLENCTKQDASRWLQRTQ*GLFWRS
Trigger: GGACCTCCAGAACAAGCCCCACTGTGTTCTCTGAAG...CCACCTTGATGCATCCTGTTTTGTGCAATTCTCTAAAAGAAGGTGCCAAAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR CCA 90 bp ATGCATCAAGGTGGAAGGCAAACATCTTTTTGGCAACCTAGGCAAAGAAGACAAGGACTAGGGCAAACATaGCTTGTTCCAAAAGCCGGG +
Preference number: 4 (lower is better)
Translates to: MHQGGRQTSFWQPRQRRQGLGQT*LVPKAG
Trigger: CCCGGCTTTTGGAACAAGCCATGTTTGCCCTAGTCC...TTGTCTTCTTTGCCTAGGTTGCCAAAAAGATGTTTGCCTTCCACCTTGATGCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
CDS-3UTR TCA 90 bp GGAAGGCACAGCCCTCTTTCAGAAGCAAAACACCTTAACACTCGGCTTCTATTTTTAGGAGACTCTGGGTaGACATACATTTTGTTGCCC +
Preference number: 4 (lower is better)
Translates to: GRHSPLSEAKHLNTRLLFLGDSG*TYILLP
Trigger: GGGCAACAAAATGTATGTTCACCCAGAGTCTCCTAA...AAATAGAAGCCGAGTGTTAAGGTGTTTTGCTTCTGAAAGAGGGCTGTGCCTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR TCA 90 bp CAAAACAGGATGCATCAAGGTGGAAGGCAAACATCTTTTTGGCAACCTAGGCAAAAAAGTCTGGGTCTTTaGGGGCTCATTCAAGTCCTC +
Preference number: 4 (lower is better)
Translates to: QNRMHQGGRQTSFWQPRQKSLGL*GLIQVL
Trigger: GAGGACTTGAATGAGCCCTCAAAGACCCAGACTTTT...TTGCCTAGGTTGCCAAAAAGATGTTTGCCTTCCACCTTGATGCATCCTGTTTTG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR TCA 90 bp CCTTCTGAAACGGAAGGCACAGCCCTCTTTCAGAAGCAAAACACCTTAACACTCAATCATAGTTGTCTCTaGAGCCTTTTGCAAAGGGGT +
Preference number: 4 (lower is better)
Translates to: PSETEGTALFQKQNTLTLNHSCL*SLLQRG
Trigger: ACCCCTTTGCAAAAGGCTTCAGAGACAACTATGATT...GAGTGTTAAGGTGTTTTGCTTCTGAAAGAGGGCTGTGCCTTCCGTTTCAGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR TCA 90 bp AAGCTTTGGCACCTTCTTTTAGAGAATTGCACAAAACAGGATGCATCAAGGTGGAGGGCATGGGATGTCTaGAGGGGCAAGGATTTAATG +
Preference number: 4 (lower is better)
Translates to: KLWHLLLENCTKQDASRWRAWDV*RGKDLM
Trigger: CATTAAATCCTTGCCCCTTCAGACATCCCATGCCCT...CCACCTTGATGCATCCTGTTTTGTGCAATTCTCTAAAAGAAGGTGCCAAAGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR TCA 90 bp AGCAAAATGTCTCCTTCTGAAACGGAAGGCACAGCCCTCTTTCAGAAGCAAAACTGGAATCTAGAGATTTaGTGGAAGGGGGTGTCTCTA +
Preference number: 4 (lower is better)
Translates to: SKMSPSETEGTALFQKQNWNLEI*WKGVSL
Trigger: TAGAGACACCCCCTTCCATCAAATCTCTAGATTCCA...GTTTTGCTTCTGAAAGAGGGCTGTGCCTTCCGTTTCAGAAGGAGACATTTTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR TCA 90 bp ATGCTAGGTTTGTTTCAGTTACCTGCAGCAATCAAAAAGCTTTGGCACCTTCTTCACAGCCTGCTTCTTTaGAGGGTTAGTGTCTCCCCA +
Preference number: 4 (lower is better)
Translates to: MLGLFQLPAAIKKLWHLLHSLLL*RVSVSP
Trigger: TGGGGAGACACTAACCCTTCAAAGAAGCAGGCTGTG...AAGAAGGTGCCAAAGCTTTTTGATTGCTGCAGGTAACTGAAACAAACCTAGCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR TCA 90 bp ACTCTCCCCTTGCCCCTGCAGCTGTTAAGTGATTTGCAAATTCTTTACAAAGCCCACAAAAGCTTTTCTTaGCTCCTGGGCCTAGTATCT +
Preference number: 4 (lower is better)
Translates to: TLPLPLQLLSDLQILYKAHKSFS*LLGLVS
Trigger: AGATACTAGGCCCAGGAGTCAAGAAAAGCTTTTGTG...GGCTTTGTAAAGAATTTGCAAATCACTTAACAGCTGCAGGGGCAAGGGGAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
CDS-3UTR TCA 90 bp TCAAAGGTTTTAACTCATCTGATAGCACTGGGCACCCAATGTTCACAGCCTGCTCACAAAAGCTTTTCTTaGCTCCTGGGCCTAGTATCT +
Preference number: 4 (lower is better)
Translates to: SKVLTHLIALGTQCSQPAHKSFS*LLGLVS
Trigger: AGATACTAGGCCCAGGAGTCAAGAAAAGCTTTTGTG...AGCAGGCTGTGAACATTGGGTGCCCAGTGCTATCAGATGAGTTAAAACCTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR TCA 90 bp ATCAAGGTGGAAGGCAAACATCTTTTTGGCAACCTAGGCAAAGAAGACAACAAACCTCCAGGGACAATCTaGTGGGATCTAGGAGAATCC +
Preference number: 4 (lower is better)
Translates to: IKVEGKHLFGNLGKEDNKPPGTI*WDLGES
Trigger: GGATTCTCCTAGATCCCATCAGATTGTCCCTGGAGG...TTTGTTGTCTTCTTTGCCTAGGTTGCCAAAAAGATGTTTGCCTTCCACCTTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000449599.4
ENST00000461503.2
CDS-3UTR GCA 90 bp ATGCTAGGTTTGTTTCAGTTACCTGCAGCAATCAAAAAGCTTTGGCACCTTCTTAGCTGCTCCCCTAACTaGATGCTTTGCAAAGCGCAG +
Preference number: 4 (lower is better)
Translates to: MLGLFQLPAAIKKLWHLLSCSPN*MLCKAQ
Trigger: CTGCGCTTTGCAAAGCATGCAGTTAGGGGAGCAGCT...AAGAAGGTGCCAAAGCTTTTTGATTGCTGCAGGTAACTGAAACAAACCTAGCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
CDS-3UTR GCA 90 bp ATGCTAGGTTTGTTTCAGTTACCTGCAGCAATCAAAAAGCTTTGGCACCTTCTTGAGCTCACCAAGAGCTaGTCCCCTAACTGCATGCTT +
Preference number: 4 (lower is better)
Translates to: MLGLFQLPAAIKKLWHLLELTKS*SPNCML
Trigger: AAGCATGCAGTTAGGGGAGCAGCTCTTGGTGAGCTC...AAGAAGGTGCCAAAGCTTTTTGATTGCTGCAGGTAACTGAAACAAACCTAGCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
CDS-3UTR GCA 90 bp GCAGAATGTAACAGCAAAATGTCTCCTTCTGAAACGGAAGGCACAGCCCTCTTTCCAATGTTCACAGCCTaGTTCTTTGAAGGGTTAGTG +
Preference number: 4 (lower is better)
Translates to: AECNSKMSPSETEGTALFPMFTA*FFEGLV
Trigger: CACTAACCCTTCAAAGAAGCAGGCTGTGAACATTGG...AAAGAGGGCTGTGCCTTCCGTTTCAGAAGGAGACATTTTGCTGTTACATTCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR CCA 90 bp GGAAGGCACAGCCCTCTTTCAGAAGCAAAACACCTTAACACTCGGCTTCTATTTTGCCGGAAAACTTCTTaGACGCTTTGTCTAAGTCCA +
Preference number: 4 (lower is better)
Translates to: GRHSPLSEAKHLNTRLLFCRKTS*TLCLSP
Trigger: TGGACTTAGACAAAGCGTCCAAGAAGTTTTCCGGCA...AAATAGAAGCCGAGTGTTAAGGTGTTTTGCTTCTGAAAGAGGGCTGTGCCTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
CDS-3UTR CCA 90 bp CAAAACAGGATGCATCAAGGTGGAAGGCAAACATCTTTTTGGCAACCTAGGCAAATCATCTCAGTTTGGTaGCGGTGGAATTTGAGCCAC +
Preference number: 4 (lower is better)
Translates to: QNRMHQGGRQTSFWQPRQIISVW*RWNLSH
Trigger: GTGGCTCAAATTCCACCGCCACCAAACTGAGATGAT...TTGCCTAGGTTGCCAAAAAGATGTTTGCCTTCCACCTTGATGCATCCTGTTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
CDS-3UTR CCA 90 bp AGCAAAATGTCTCCTTCTGAAACGGAAGGCACAGCCCTCTTTCAGAAGCAAAACGAGAAGGTAAAAGTCTaGGTCTTTGAGGGCTCATTC +
Preference number: 4 (lower is better)
Translates to: SKMSPSETEGTALFQKQNEKVKV*VFEGSF
Trigger: GAATGAGCCCTCAAAGACCCAGACTTTTACCTTCTC...GTTTTGCTTCTGAAAGAGGGCTGTGCCTTCCGTTTCAGAAGGAGACATTTTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR CCA 90 bp ATCAAGGTGGAAGGCAAACATCTTTTTGGCAACCTAGGCAAAGAAGACAACAAAAGGAAAGGTTGGGTCTaGGTAATACCCCAGGGCATG +
Preference number: 4 (lower is better)
Translates to: IKVEGKHLFGNLGKEDNKRKGWV*VIPQGM
Trigger: CATGCCCTGGGGTATTACCCAGACCCAACCTTTCCT...TTTGTTGTCTTCTTTGCCTAGGTTGCCAAAAAGATGTTTGCCTTCCACCTTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR CCA 90 bp AGGCCTAGCAAGTCTCAAGTGAGGCAATCCTGGACTAGGGCAAACATGGCTTGTTGTCCTCACACTTTATaGAGGGTGAATTTTCATTAC +
Preference number: 4 (lower is better)
Translates to: RPSKSQVRQSWTRANMACCPHTL*RVNFHY
Trigger: GTAATGAAAATTCACCCTCCATAAAGTGTGAGGACA...ACAAGCCATGTTTGCCCTAGTCCAGGATTGCCTCACTTGAGACTTGCTAGGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
CDS-3UTR CCA 90 bp GTAACAGCAAAATGTCTCCTTCTGAAACGGAAGGCACAGCCCTCTTTCAGAAGCCAGGATGCATCAAGGTaGAAGGCAAACATCTTTTTG +
Preference number: 4 (lower is better)
Translates to: VTAKCLLLKRKAQPSFRSQDASR*KANIFL
Trigger: CAAAAAGATGTTTGCCTTCCACCTTGATGCATCCTG...GCTTCTGAAAGAGGGCTGTGCCTTCCGTTTCAGAAGGAGACATTTTGCTGTTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR TCA 90 bp GTAACAGCAAAATGTCTCCTTCTGAAACGGAAGGCACAGCCCTCTTTCAGAAGCCGCCTTTGTTATTGGTaGGTTTTAATTTCCCGAATG +
Preference number: 4 (lower is better)
Translates to: VTAKCLLLKRKAQPSFRSRLCYW*VLISRM
Trigger: CATTCGGGAAATTAAAACTCACCAATAACAAAGGCG...GCTTCTGAAAGAGGGCTGTGCCTTCCGTTTCAGAAGGAGACATTTTGCTGTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR TCA 90 bp TCAAAGGTTTTAACTCATCTGATAGCACTGGGCACCCAATGTTCACAGCCTGCTAATCATAGTTGTCTCTaGAGCCTTTTGCAAAGGGGT +
Preference number: 4 (lower is better)
Translates to: SKVLTHLIALGTQCSQPANHSCL*SLLQRG
Trigger: ACCCCTTTGCAAAAGGCTTCAGAGACAACTATGATT...AGCAGGCTGTGAACATTGGGTGCCCAGTGCTATCAGATGAGTTAAAACCTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR TCA 90 bp AGCAAAATGTCTCCTTCTGAAACGGAAGGCACAGCCCTCTTTCAGAAGCAAAACCAGATTCATAGGAACTaGTGTCTAGTTTGTTGGTCC +
Preference number: 4 (lower is better)
Translates to: SKMSPSETEGTALFQKQNQIHRN*CLVCWS
Trigger: GGACCAACAAACTAGACATCAGTTCCTATGAATCTG...GTTTTGCTTCTGAAAGAGGGCTGTGCCTTCCGTTTCAGAAGGAGACATTTTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR TCA 90 bp ATGCTAGGTTTGTTTCAGTTACCTGCAGCAATCAAAAAGCTTTGGCACCTTCTTAGGGCATGGGATGTCTaGAGGGGCAAGGATTTAATG +
Preference number: 4 (lower is better)
Translates to: MLGLFQLPAAIKKLWHLLRAWDV*RGKDLM
Trigger: CATTAAATCCTTGCCCCTTCAGACATCCCATGCCCT...AAGAAGGTGCCAAAGCTTTTTGATTGCTGCAGGTAACTGAAACAAACCTAGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR TCA 90 bp ATGCATCAAGGTGGAAGGCAAACATCTTTTTGGCAACCTAGGCAAAGAAGACAACCCTCCCATGCCTTTTaGGGTGTCTTTACTATACTC +
Preference number: 4 (lower is better)
Translates to: MHQGGRQTSFWQPRQRRQPSHAF*GVFTIL
Trigger: GAGTATAGTAAAGACACCTCAAAAGGCATGGGAGGG...TTGTCTTCTTTGCCTAGGTTGCCAAAAAGATGTTTGCCTTCCACCTTGATGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR TCA 90 bp ATAGAAATGAGAATCAAAGGTTTTAACTCATCTGATAGCACTGGGCACCCAATGCACAGCCTGCTTCTTTaGAGGGTTAGTGTCTCCCCA +
Preference number: 4 (lower is better)
Translates to: IEMRIKGFNSSDSTGHPMHSLLL*RVSVSP
Trigger: TGGGGAGACACTAACCCTTCAAAGAAGCAGGCTGTG...CATTGGGTGCCCAGTGCTATCAGATGAGTTAAAACCTTTGATTCTCATTTCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR GCA 90 bp CTTTACAAAGCCAAAGCACCAGTTTTACATTATCCCAGACACCTATGTAGACTACCTAACTGCATGCTTTaGAAAGCGCAGACGGCAGCT +
Preference number: 4 (lower is better)
Translates to: LYKAKAPVLHYPRHLCRLPNCML*KAQTAA
Trigger: AGCTGCCGTCTGCGCTTTGCAAAGCATGCAGTTAGG...TAGTCTACATAGGTGTCTGGGATAATGTAAAACTGGTGCTTTGGCTTTGTAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
CDS-3UTR GCA 90 bp CCTTCTGAAACGGAAGGCACAGCCCTCTTTCAGAAGCAAAACACCTTAACACTCGTAACTTCAACAATATaGAGTCGGGGTTGGTATTTG +
Preference number: 4 (lower is better)
Translates to: PSETEGTALFQKQNTLTLVTSTI*SRGWYL
Trigger: CAAATACCAACCCCGACTGCATATTGTTGAAGTTAC...GAGTGTTAAGGTGTTTTGCTTCTGAAAGAGGGCTGTGCCTTCCGTTTCAGAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR GCA 90 bp AGCAAAATGTCTCCTTCTGAAACGGAAGGCACAGCCCTCTTTCAGAAGCAAAACTTGCACAAAACAGGATaGATCAAGGTGGAAGGCAAA +
Preference number: 4 (lower is better)
Translates to: SKMSPSETEGTALFQKQNLHKTG*IKVEGK
Trigger: TTTGCCTTCCACCTTGATGCATCCTGTTTTGTGCAA...GTTTTGCTTCTGAAAGAGGGCTGTGCCTTCCGTTTCAGAAGGAGACATTTTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR GCA 90 bp GGATGCATCAAGGTGGAAGGCAAACATCTTTTTGGCAACCTAGGCAAAGAAGACCTGCCCTTTTTCAATTaGCAAAGCATCGGTCAAGTT +
Preference number: 4 (lower is better)
Translates to: GCIKVEGKHLFGNLGKEDLPFFN*QSIGQV
Trigger: AACTTGACCGATGCTTTGGCAATTGAAAAAGGGCAG...GTCTTCTTTGCCTAGGTTGCCAAAAAGATGTTTGCCTTCCACCTTGATGCATCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000461503.2
CDS-3UTR CCA 90 bp ATAGAAATGAGAATCAAAGGTTTTAACTCATCTGATAGCACTGGGCACCCAATGTCAGTTTGGTGGCGGTaGAATTTGAGCCACAGAGGC +
Preference number: 4 (lower is better)
Translates to: IEMRIKGFNSSDSTGHPMSVWWR*NLSHRG
Trigger: GCCTCTGTGGCTCAAATTCCACCGCCACCAAACTGA...CATTGGGTGCCCAGTGCTATCAGATGAGTTAAAACCTTTGATTCTCATTTCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
CDS-3UTR CCA 90 bp AGGCCTAGCAAGTCTCAAGTGAGGCAATCCTGGACTAGGGCAAACATGGCTTGTAGTATTAGGAGACTCTaGGTGAACATACATTTTGTT +
Preference number: 4 (lower is better)
Translates to: RPSKSQVRQSWTRANMACSIRRL*VNIHFV
Trigger: AACAAAATGTATGTTCACCCAGAGTCTCCTAATACT...ACAAGCCATGTTTGCCCTAGTCCAGGATTGCCTCACTTGAGACTTGCTAGGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
CDS-3UTR CCA 90 bp CTTTGGCACCTTCTTTTAGAGAATTGCACAAAACAGGATGCATCAAGGTGGAAGTCCTGTCTCATCCAGTaGGAACCAGTATTAGGAGAC +
Preference number: 4 (lower is better)
Translates to: LWHLLLENCTKQDASRWKSCLIQ*EPVLGD
Trigger: GTCTCCTAATACTGGTTCCCACTGGATGAGACAGGA...CTTCCACCTTGATGCATCCTGTTTTGTGCAATTCTCTAAAAGAAGGTGCCAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR CCA 90 bp AAGCTTTGGCACCTTCTTTTAGAGAATTGCACAAAACAGGATGCATCAAGGTGGTCCTGTCTCATCCAGTaGGAACCAGTATTAGGAGAC +
Preference number: 4 (lower is better)
Translates to: KLWHLLLENCTKQDASRWSCLIQ*EPVLGD
Trigger: GTCTCCTAATACTGGTTCCCACTGGATGAGACAGGA...CCACCTTGATGCATCCTGTTTTGTGCAATTCTCTAAAAGAAGGTGCCAAAGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR CCA 90 bp CCTTCTGAAACGGAAGGCACAGCCCTCTTTCAGAAGCAAAACACCTTAACACTCATATGCAGTCGGGGTTaGTATTTGTGTAAGGATTGT +
Preference number: 4 (lower is better)
Translates to: PSETEGTALFQKQNTLTLICSRG*YLCKDC
Trigger: ACAATCCTTACACAAATACCAACCCCGACTGCATAT...GAGTGTTAAGGTGTTTTGCTTCTGAAAGAGGGCTGTGCCTTCCGTTTCAGAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR CCA 90 bp GGAAGGCACAGCCCTCTTTCAGAAGCAAAACACCTTAACACTCGGCTTCTATTTCAGGATGCATCAAGGTaGAAGGCAAACATCTTTTTG +
Preference number: 4 (lower is better)
Translates to: GRHSPLSEAKHLNTRLLFQDASR*KANIFL
Trigger: CAAAAAGATGTTTGCCTTCCACCTTGATGCATCCTG...AAATAGAAGCCGAGTGTTAAGGTGTTTTGCTTCTGAAAGAGGGCTGTGCCTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR TCA 90 bp AGCAAAATGTCTCCTTCTGAAACGGAAGGCACAGCCCTCTTTCAGAAGCAAAACAATGAATTGCGTTTCTaGGAAGGTAAAAGTCTGGGT +
Preference number: 4 (lower is better)
Translates to: SKMSPSETEGTALFQKQNNELRF*EGKSLG
Trigger: ACCCAGACTTTTACCTTCTCAGAAACGCAATTCATT...GTTTTGCTTCTGAAAGAGGGCTGTGCCTTCCGTTTCAGAAGGAGACATTTTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR TCA 90 bp ATGCTAGGTTTGTTTCAGTTACCTGCAGCAATCAAAAAGCTTTGGCACCTTCTTAGGCAGTCACTGCAATaGATTGCGTTTCTGAGAAGG +
Preference number: 4 (lower is better)
Translates to: MLGLFQLPAAIKKLWHLLRQSLQ*IAFLRR
Trigger: CCTTCTCAGAAACGCAATTCATTGCAGTGACTGCCT...AAGAAGGTGCCAAAGCTTTTTGATTGCTGCAGGTAACTGAAACAAACCTAGCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR TCA 90 bp ATCAAGGTGGAAGGCAAACATCTTTTTGGCAACCTAGGCAAAGAAGACAACAAAAGGCAGTCACTGCAATaGATTGCGTTTCTGAGAAGG +
Preference number: 4 (lower is better)
Translates to: IKVEGKHLFGNLGKEDNKRQSLQ*IAFLRR
Trigger: CCTTCTCAGAAACGCAATTCATTGCAGTGACTGCCT...TTTGTTGTCTTCTTTGCCTAGGTTGCCAAAAAGATGTTTGCCTTCCACCTTGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR TCA 90 bp GGATGCATCAAGGTGGAAGGCAAACATCTTTTTGGCAACCTAGGCAAAGAAGACGACAATCTGATGGGATaGATCATAGTTGTCTCTGAA +
Preference number: 4 (lower is better)
Translates to: GCIKVEGKHLFGNLGKEDDNLMG*IIVVSE
Trigger: TTCAGAGACAACTATGATTCATCCCATCAGATTGTC...GTCTTCTTTGCCTAGGTTGCCAAAAAGATGTTTGCCTTCCACCTTGATGCATCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295743.8
CDS-3UTR TCA 90 bp ATAGAAATGAGAATCAAAGGTTTTAACTCATCTGATAGCACTGGGCACCCAATGCTTGAGGTAAAGTGTTaGCAAAGGGCTCCGGGAAGA +
Preference number: 4 (lower is better)
Translates to: IEMRIKGFNSSDSTGHPMLEVKC*QRAPGR
Trigger: TCTTCCCGGAGCCCTTTGTCAACACTTTACCTCAAG...CATTGGGTGCCCAGTGCTATCAGATGAGTTAAAACCTTTGATTCTCATTTCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR TCA 90 bp ATGCATCAAGGTGGAAGGCAAACATCTTTTTGGCAACCTAGGCAAAGAAGACAATGGAATCTAGAGATTTaGTGGAAGGGGGTGTCTCTA +
Preference number: 4 (lower is better)
Translates to: MHQGGRQTSFWQPRQRRQWNLEI*WKGVSL
Trigger: TAGAGACACCCCCTTCCATCAAATCTCTAGATTCCA...TTGTCTTCTTTGCCTAGGTTGCCAAAAAGATGTTTGCCTTCCACCTTGATGCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR TCA 90 bp ATGCTAGGTTTGTTTCAGTTACCTGCAGCAATCAAAAAGCTTTGGCACCTTCTTCCCTCCCATGCCTTTTaGGGTGTCTTTACTATACTC +
Preference number: 4 (lower is better)
Translates to: MLGLFQLPAAIKKLWHLLPSHAF*GVFTIL
Trigger: GAGTATAGTAAAGACACCTCAAAAGGCATGGGAGGG...AAGAAGGTGCCAAAGCTTTTTGATTGCTGCAGGTAACTGAAACAAACCTAGCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR TCA 90 bp ATAGAAATGAGAATCAAAGGTTTTAACTCATCTGATAGCACTGGGCACCCAATGCACGCTGGAAGAAGGTaGCTTAGATCTTTGTCCCCA +
Preference number: 4 (lower is better)
Translates to: IEMRIKGFNSSDSTGHPMHAGRR*LRSLSP
Trigger: TGGGGACAAAGATCTAAGTCACCTTCTTCCAGCGTG...CATTGGGTGCCCAGTGCTATCAGATGAGTTAAAACCTTTGATTCTCATTTCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461503.2
CDS-3UTR GCA 90 bp AGCAAAATGTCTCCTTCTGAAACGGAAGGCACAGCCCTCTTTCAGAAGCAAAACGAACATACATTTTGTTaGCCTGCATGTTATTGTCGG +
Preference number: 4 (lower is better)
Translates to: SKMSPSETEGTALFQKQNEHTFC*PACYCR
Trigger: CCGACAATAACATGCAGGGCAACAAAATGTATGTTC...GTTTTGCTTCTGAAAGAGGGCTGTGCCTTCCGTTTCAGAAGGAGACATTTTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR GCA 90 bp GCAGAATGTAACAGCAAAATGTCTCCTTCTGAAACGGAAGGCACAGCCCTCTTTGAACATACATTTTGTTaGCCTGCATGTTATTGTCGG +
Preference number: 4 (lower is better)
Translates to: AECNSKMSPSETEGTALFEHTFC*PACYCR
Trigger: CCGACAATAACATGCAGGGCAACAAAATGTATGTTC...AAAGAGGGCTGTGCCTTCCGTTTCAGAAGGAGACATTTTGCTGTTACATTCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR GCA 90 bp GGATGCATCAAGGTGGAAGGCAAACATCTTTTTGGCAACCTAGGCAAAGAAGACGGTGTTGTTGTTATTTaGGCCTTTGTTATTGGTGAG +
Preference number: 4 (lower is better)
Translates to: GCIKVEGKHLFGNLGKEDGVVVI*AFVIGE
Trigger: CTCACCAATAACAAAGGCGCAAATAACAACAACACC...GTCTTCTTTGCCTAGGTTGCCAAAAAGATGTTTGCCTTCCACCTTGATGCATCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR GCA 90 bp GGAAGGCACAGCCCTCTTTCAGAAGCAAAACACCTTAACACTCGGCTTCTATTTGGTGTTGTTGTTATTTaGGCCTTTGTTATTGGTGAG +
Preference number: 4 (lower is better)
Translates to: GRHSPLSEAKHLNTRLLFGVVVI*AFVIGE
Trigger: CTCACCAATAACAAAGGCGCAAATAACAACAACACC...AAATAGAAGCCGAGTGTTAAGGTGTTTTGCTTCTGAAAGAGGGCTGTGCCTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR GCA 90 bp TCAAAGGTTTTAACTCATCTGATAGCACTGGGCACCCAATGTTCACAGCCTGCTGTCTCTGAAGCCTTTTaGAAAGGGGTTATGATCAAT +
Preference number: 4 (lower is better)
Translates to: SKVLTHLIALGTQCSQPAVSEAF*KGVMIN
Trigger: ATTGATCATAACCCCTTTGCAAAAGGCTTCAGAGAC...AGCAGGCTGTGAACATTGGGTGCCCAGTGCTATCAGATGAGTTAAAACCTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR GCA 90 bp CTTTGGCACCTTCTTTTAGAGAATTGCACAAAACAGGATGCATCAAGGTGGAAGCCAATGTTCACAGCCTaGTTCTTTGAAGGGTTAGTG +
Preference number: 4 (lower is better)
Translates to: LWHLLLENCTKQDASRWKPMFTA*FFEGLV
Trigger: CACTAACCCTTCAAAGAAGCAGGCTGTGAACATTGG...CTTCCACCTTGATGCATCCTGTTTTGTGCAATTCTCTAAAAGAAGGTGCCAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR CCA 90 bp GATTTGCAAATTCTTTACAAAGCCAAAGCACCAGTTTTACATTATCCCAGACACATTATAAAGGCAGGATaGGGGAGCCAGCGCCCTCTT +
Preference number: 4 (lower is better)
Translates to: DLQILYKAKAPVLHYPRHIIKAG*GSQRPL
Trigger: AAGAGGGCGCTGGCTCCCCCATCCTGCCTTTATAAT...GTGTCTGGGATAATGTAAAACTGGTGCTTTGGCTTTGTAAAGAATTTGCAAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295743.8
CDS-3UTR CCA 90 bp ATCAAGGTGGAAGGCAAACATCTTTTTGGCAACCTAGGCAAAGAAGACAACAAAATCATCTCAGTTTGGTaGCGGTGGAATTTGAGCCAC +
Preference number: 4 (lower is better)
Translates to: IKVEGKHLFGNLGKEDNKIISVW*RWNLSH
Trigger: GTGGCTCAAATTCCACCGCCACCAAACTGAGATGAT...TTTGTTGTCTTCTTTGCCTAGGTTGCCAAAAAGATGTTTGCCTTCCACCTTGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
CDS-3UTR CCA 90 bp GGATGCATCAAGGTGGAAGGCAAACATCTTTTTGGCAACCTAGGCAAAGAAGACATATGCAGTCGGGGTTaGTATTTGTGTAAGGATTGT +
Preference number: 4 (lower is better)
Translates to: GCIKVEGKHLFGNLGKEDICSRG*YLCKDC
Trigger: ACAATCCTTACACAAATACCAACCCCGACTGCATAT...GTCTTCTTTGCCTAGGTTGCCAAAAAGATGTTTGCCTTCCACCTTGATGCATCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR CCA 90 bp ATGCATCAAGGTGGAAGGCAAACATCTTTTTGGCAACCTAGGCAAAGAAGACAAGAGAAGGTAAAAGTCTaGGTCTTTGAGGGCTCATTC +
Preference number: 4 (lower is better)
Translates to: MHQGGRQTSFWQPRQRRQEKVKV*VFEGSF
Trigger: GAATGAGCCCTCAAAGACCCAGACTTTTACCTTCTC...TTGTCTTCTTTGCCTAGGTTGCCAAAAAGATGTTTGCCTTCCACCTTGATGCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR CCA 90 bp AGCAAAATGTCTCCTTCTGAAACGGAAGGCACAGCCCTCTTTCAGAAGCAAAACTTCGCTTACAAGCACTaGTGTATACTCCTGAATCAT +
Preference number: 4 (lower is better)
Translates to: SKMSPSETEGTALFQKQNFAYKH*CILLNH
Trigger: ATGATTCAGGAGTATACACCAGTGCTTGTAAGCGAA...GTTTTGCTTCTGAAAGAGGGCTGTGCCTTCCGTTTCAGAAGGAGACATTTTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR CCA 90 bp ACTCTCCCCTTGCCCCTGCAGCTGTTAAGTGATTTGCAAATTCTTTACAAAGCCAGTATCTTTTGCCCCTaGCAGAATGTAACAGCAAAA +
Preference number: 4 (lower is better)
Translates to: TLPLPLQLLSDLQILYKASIFCP*QNVTAK
Trigger: TTTTGCTGTTACATTCTGCCAGGGGCAAAAGATACT...GGCTTTGTAAAGAATTTGCAAATCACTTAACAGCTGCAGGGGCAAGGGGAGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
CDS-3UTR CCA 90 bp GATTTGCAAATTCTTTACAAAGCCAAAGCACCAGTTTTACATTATCCCAGACACGGACTAGGGCAAACATaGCTTGTTCCAAAAGCCGGG +
Preference number: 4 (lower is better)
Translates to: DLQILYKAKAPVLHYPRHGLGQT*LVPKAG
Trigger: CCCGGCTTTTGGAACAAGCCATGTTTGCCCTAGTCC...GTGTCTGGGATAATGTAAAACTGGTGCTTTGGCTTTGTAAAGAATTTGCAAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
CDS-3UTR TCA 90 bp CTTTACAAAGCCAAAGCACCAGTTTTACATTATCCCAGACACCTATGTAGACTAAAAAGTCTGGGTCTTTaGGGGCTCATTCAAGTCCTC +
Preference number: 4 (lower is better)
Translates to: LYKAKAPVLHYPRHLCRLKSLGL*GLIQVL
Trigger: GAGGACTTGAATGAGCCCTCAAAGACCCAGACTTTT...TAGTCTACATAGGTGTCTGGGATAATGTAAAACTGGTGCTTTGGCTTTGTAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
CDS-3UTR TCA 90 bp GATTTGCAAATTCTTTACAAAGCCAAAGCACCAGTTTTACATTATCCCAGACACCTTGAGGTAAAGTGTTaGCAAAGGGCTCCGGGAAGA +
Preference number: 4 (lower is better)
Translates to: DLQILYKAKAPVLHYPRHLEVKC*QRAPGR
Trigger: TCTTCCCGGAGCCCTTTGTCAACACTTTACCTCAAG...GTGTCTGGGATAATGTAAAACTGGTGCTTTGGCTTTGTAAAGAATTTGCAAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
CDS-3UTR TCA 90 bp CAAATTCTTTACAAAGCCAAAGCACCAGTTTTACATTATCCCAGACACCTATGTCTTGAGGTAAAGTGTTaGCAAAGGGCTCCGGGAAGA +
Preference number: 4 (lower is better)
Translates to: QILYKAKAPVLHYPRHLCLEVKC*QRAPGR
Trigger: TCTTCCCGGAGCCCTTTGTCAACACTTTACCTCAAG...ACATAGGTGTCTGGGATAATGTAAAACTGGTGCTTTGGCTTTGTAAAGAATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
CDS-3UTR TCA 90 bp CTTTGGCACCTTCTTTTAGAGAATTGCACAAAACAGGATGCATCAAGGTGGAAGCAGATTCATAGGAACTaGTGTCTAGTTTGTTGGTCC +
Preference number: 4 (lower is better)
Translates to: LWHLLLENCTKQDASRWKQIHRN*CLVCWS
Trigger: GGACCAACAAACTAGACATCAGTTCCTATGAATCTG...CTTCCACCTTGATGCATCCTGTTTTGTGCAATTCTCTAAAAGAAGGTGCCAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR TCA 90 bp ACTCTCCCCTTGCCCCTGCAGCTGTTAAGTGATTTGCAAATTCTTTACAAAGCCACACTTTATGGAGGGTaGATTTTCATTACTGGAGTT +
Preference number: 4 (lower is better)
Translates to: TLPLPLQLLSDLQILYKATLYGG*IFITGV
Trigger: AACTCCAGTAATGAAAATTCACCCTCCATAAAGTGT...GGCTTTGTAAAGAATTTGCAAATCACTTAACAGCTGCAGGGGCAAGGGGAGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
CDS-3UTR TCA 90 bp GGAAGGCACAGCCCTCTTTCAGAAGCAAAACACCTTAACACTCGGCTTCTATTTGGAATCAAAGTCAGGTaGAACTATCACTTTCACAAA +
Preference number: 4 (lower is better)
Translates to: GRHSPLSEAKHLNTRLLFGIKVR*NYHFHK
Trigger: TTTGTGAAAGTGATAGTTTCACCTGACTTTGATTCC...AAATAGAAGCCGAGTGTTAAGGTGTTTTGCTTCTGAAAGAGGGCTGTGCCTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR GCA 90 bp CAAAACAGGATGCATCAAGGTGGAAGGCAAACATCTTTTTGGCAACCTAGGCAAGTAACTTCAACAATATaGAGTCGGGGTTGGTATTTG +
Preference number: 4 (lower is better)
Translates to: QNRMHQGGRQTSFWQPRQVTSTI*SRGWYL
Trigger: CAAATACCAACCCCGACTGCATATTGTTGAAGTTAC...TTGCCTAGGTTGCCAAAAAGATGTTTGCCTTCCACCTTGATGCATCCTGTTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR GCA 90 bp AAGCTTTGGCACCTTCTTTTAGAGAATTGCACAAAACAGGATGCATCAAGGTGGCATAATACCCTCCCATaGCTTTTGAGGTGTCTTTAC +
Preference number: 4 (lower is better)
Translates to: KLWHLLLENCTKQDASRWHNTLP*LLRCLY
Trigger: GTAAAGACACCTCAAAAGGCATGGGAGGGTATTATG...CCACCTTGATGCATCCTGTTTTGTGCAATTCTCTAAAAGAAGGTGCCAAAGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR GCA 90 bp AAGCTTTGGCACCTTCTTTTAGAGAATTGCACAAAACAGGATGCATCAAGGTGGTTGCACAAAACAGGATaGATCAAGGTGGAAGGCAAA +
Preference number: 4 (lower is better)
Translates to: KLWHLLLENCTKQDASRWLHKTG*IKVEGK
Trigger: TTTGCCTTCCACCTTGATGCATCCTGTTTTGTGCAA...CCACCTTGATGCATCCTGTTTTGTGCAATTCTCTAAAAGAAGGTGCCAAAGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR CCA 90 bp GTAACAGCAAAATGTCTCCTTCTGAAACGGAAGGCACAGCCCTCTTTCAGAAGCAGTATTAGGAGACTCTaGGTGAACATACATTTTGTT +
Preference number: 4 (lower is better)
Translates to: VTAKCLLLKRKAQPSFRSSIRRL*VNIHFV
Trigger: AACAAAATGTATGTTCACCCAGAGTCTCCTAATACT...GCTTCTGAAAGAGGGCTGTGCCTTCCGTTTCAGAAGGAGACATTTTGCTGTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR CCA 90 bp CAAAACAGGATGCATCAAGGTGGAAGGCAAACATCTTTTTGGCAACCTAGGCAAAGGCAAACATCTTTTTaGCAACCTAGGCAAAGAAGA +
Preference number: 4 (lower is better)
Translates to: QNRMHQGGRQTSFWQPRQRQTSF*QPRQRR
Trigger: TCTTCTTTGCCTAGGTTGCCAAAAAGATGTTTGCCT...TTGCCTAGGTTGCCAAAAAGATGTTTGCCTTCCACCTTGATGCATCCTGTTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR CCA 90 bp AAGCTTTGGCACCTTCTTTTAGAGAATTGCACAAAACAGGATGCATCAAGGTGGCAGGATGCATCAAGGTaGAAGGCAAACATCTTTTTG +
Preference number: 4 (lower is better)
Translates to: KLWHLLLENCTKQDASRWQDASR*KANIFL
Trigger: CAAAAAGATGTTTGCCTTCCACCTTGATGCATCCTG...CCACCTTGATGCATCCTGTTTTGTGCAATTCTCTAAAAGAAGGTGCCAAAGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR CCA 90 bp GTAACAGCAAAATGTCTCCTTCTGAAACGGAAGGCACAGCCCTCTTTCAGAAGCGCAATCAAAAAGCTTTaGCACCTTCTTTTAGAGAAT +
Preference number: 4 (lower is better)
Translates to: VTAKCLLLKRKAQPSFRSAIKKL*HLLLEN
Trigger: ATTCTCTAAAAGAAGGTGCCAAAGCTTTTTGATTGC...GCTTCTGAAAGAGGGCTGTGCCTTCCGTTTCAGAAGGAGACATTTTGCTGTTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR TCA 90 bp ATGCTAGGTTTGTTTCAGTTACCTGCAGCAATCAAAAAGCTTTGGCACCTTCTTAATCATAGTTGTCTCTaGAGCCTTTTGCAAAGGGGT +
Preference number: 4 (lower is better)
Translates to: MLGLFQLPAAIKKLWHLLNHSCL*SLLQRG
Trigger: ACCCCTTTGCAAAAGGCTTCAGAGACAACTATGATT...AAGAAGGTGCCAAAGCTTTTTGATTGCTGCAGGTAACTGAAACAAACCTAGCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR TCA 90 bp CAAATTCTTTACAAAGCCAAAGCACCAGTTTTACATTATCCCAGACACCTATGTCCCTCCCATGCCTTTTaGGGTGTCTTTACTATACTC +
Preference number: 4 (lower is better)
Translates to: QILYKAKAPVLHYPRHLCPSHAF*GVFTIL
Trigger: GAGTATAGTAAAGACACCTCAAAAGGCATGGGAGGG...ACATAGGTGTCTGGGATAATGTAAAACTGGTGCTTTGGCTTTGTAAAGAATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
CDS-3UTR GCA 90 bp CTTTGGCACCTTCTTTTAGAGAATTGCACAAAACAGGATGCATCAAGGTGGAAGTACATTTTGTTGCCCTaGATGTTATTGTCGGCTTTG +
Preference number: 4 (lower is better)
Translates to: LWHLLLENCTKQDASRWKYILLP*MLLSAL
Trigger: CAAAGCCGACAATAACATGCAGGGCAACAAAATGTA...CTTCCACCTTGATGCATCCTGTTTTGTGCAATTCTCTAAAAGAAGGTGCCAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR GCA 90 bp ATGCTAGGTTTGTTTCAGTTACCTGCAGCAATCAAAAAGCTTTGGCACCTTCTTCATAATACCCTCCCATaGCTTTTGAGGTGTCTTTAC +
Preference number: 4 (lower is better)
Translates to: MLGLFQLPAAIKKLWHLLHNTLP*LLRCLY
Trigger: GTAAAGACACCTCAAAAGGCATGGGAGGGTATTATG...AAGAAGGTGCCAAAGCTTTTTGATTGCTGCAGGTAACTGAAACAAACCTAGCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR CCA 90 bp CAAATTCTTTACAAAGCCAAAGCACCAGTTTTACATTATCCCAGACACCTATGTTCCTGTCTCATCCAGTaGGAACCAGTATTAGGAGAC +
Preference number: 4 (lower is better)
Translates to: QILYKAKAPVLHYPRHLCSCLIQ*EPVLGD
Trigger: GTCTCCTAATACTGGTTCCCACTGGATGAGACAGGA...ACATAGGTGTCTGGGATAATGTAAAACTGGTGCTTTGGCTTTGTAAAGAATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
CDS-3UTR CCA 90 bp CTTTACAAAGCCAAAGCACCAGTTTTACATTATCCCAGACACCTATGTAGACTAGAGAAGGTAAAAGTCTaGGTCTTTGAGGGCTCATTC +
Preference number: 4 (lower is better)
Translates to: LYKAKAPVLHYPRHLCRLEKVKV*VFEGSF
Trigger: GAATGAGCCCTCAAAGACCCAGACTTTTACCTTCTC...TAGTCTACATAGGTGTCTGGGATAATGTAAAACTGGTGCTTTGGCTTTGTAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
CDS-3UTR CCA 90 bp AAGCTTTGGCACCTTCTTTTAGAGAATTGCACAAAACAGGATGCATCAAGGTGGTTCGCTTACAAGCACTaGTGTATACTCCTGAATCAT +
Preference number: 4 (lower is better)
Translates to: KLWHLLLENCTKQDASRWFAYKH*CILLNH
Trigger: ATGATTCAGGAGTATACACCAGTGCTTGTAAGCGAA...CCACCTTGATGCATCCTGTTTTGTGCAATTCTCTAAAAGAAGGTGCCAAAGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR CCA 90 bp CAAAACAGGATGCATCAAGGTGGAAGGCAAACATCTTTTTGGCAACCTAGGCAATGTCCTCACACTTTATaGAGGGTGAATTTTCATTAC +
Preference number: 4 (lower is better)
Translates to: QNRMHQGGRQTSFWQPRQCPHTL*RVNFHY
Trigger: GTAATGAAAATTCACCCTCCATAAAGTGTGAGGACA...TTGCCTAGGTTGCCAAAAAGATGTTTGCCTTCCACCTTGATGCATCCTGTTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR CCA 90 bp AAGCTTTGGCACCTTCTTTTAGAGAATTGCACAAAACAGGATGCATCAAGGTGGAGGCAAACATCTTTTTaGCAACCTAGGCAAAGAAGA +
Preference number: 4 (lower is better)
Translates to: KLWHLLLENCTKQDASRWRQTSF*QPRQRR
Trigger: TCTTCTTTGCCTAGGTTGCCAAAAAGATGTTTGCCT...CCACCTTGATGCATCCTGTTTTGTGCAATTCTCTAAAAGAAGGTGCCAAAGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR CCA 90 bp CTTTGGCACCTTCTTTTAGAGAATTGCACAAAACAGGATGCATCAAGGTGGAAGAGTATCTTTTGCCCCTaGCAGAATGTAACAGCAAAA +
Preference number: 4 (lower is better)
Translates to: LWHLLLENCTKQDASRWKSIFCP*QNVTAK
Trigger: TTTTGCTGTTACATTCTGCCAGGGGCAAAAGATACT...CTTCCACCTTGATGCATCCTGTTTTGTGCAATTCTCTAAAAGAAGGTGCCAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR CCA 90 bp ATGCATCAAGGTGGAAGGCAAACATCTTTTTGGCAACCTAGGCAAAGAAGACAAAGTATCTTTTGCCCCTaGCAGAATGTAACAGCAAAA +
Preference number: 4 (lower is better)
Translates to: MHQGGRQTSFWQPRQRRQSIFCP*QNVTAK
Trigger: TTTTGCTGTTACATTCTGCCAGGGGCAAAAGATACT...TTGTCTTCTTTGCCTAGGTTGCCAAAAAGATGTTTGCCTTCCACCTTGATGCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR TCA 90 bp GATTTGCAAATTCTTTACAAAGCCAAAGCACCAGTTTTACATTATCCCAGACACTTAGGAGACTCTGGGTaGACATACATTTTGTTGCCC +
Preference number: 4 (lower is better)
Translates to: DLQILYKAKAPVLHYPRHLGDSG*TYILLP
Trigger: GGGCAACAAAATGTATGTTCACCCAGAGTCTCCTAA...GTGTCTGGGATAATGTAAAACTGGTGCTTTGGCTTTGTAAAGAATTTGCAAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
CDS-3UTR TCA 90 bp CAAATTCTTTACAAAGCCAAAGCACCAGTTTTACATTATCCCAGACACCTATGTTTAGGAGACTCTGGGTaGACATACATTTTGTTGCCC +
Preference number: 4 (lower is better)
Translates to: QILYKAKAPVLHYPRHLCLGDSG*TYILLP
Trigger: GGGCAACAAAATGTATGTTCACCCAGAGTCTCCTAA...ACATAGGTGTCTGGGATAATGTAAAACTGGTGCTTTGGCTTTGTAAAGAATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
CDS-3UTR TCA 90 bp ATGCTAGGTTTGTTTCAGTTACCTGCAGCAATCAAAAAGCTTTGGCACCTTCTTAATGAATTGCGTTTCTaGGAAGGTAAAAGTCTGGGT +
Preference number: 4 (lower is better)
Translates to: MLGLFQLPAAIKKLWHLLNELRF*EGKSLG
Trigger: ACCCAGACTTTTACCTTCTCAGAAACGCAATTCATT...AAGAAGGTGCCAAAGCTTTTTGATTGCTGCAGGTAACTGAAACAAACCTAGCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR TCA 90 bp AAGCTTTGGCACCTTCTTTTAGAGAATTGCACAAAACAGGATGCATCAAGGTGGACACTTTATGGAGGGTaGATTTTCATTACTGGAGTT +
Preference number: 4 (lower is better)
Translates to: KLWHLLLENCTKQDASRWTLYGG*IFITGV
Trigger: AACTCCAGTAATGAAAATTCACCCTCCATAAAGTGT...CCACCTTGATGCATCCTGTTTTGTGCAATTCTCTAAAAGAAGGTGCCAAAGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR TCA 90 bp ATGCATCAAGGTGGAAGGCAAACATCTTTTTGGCAACCTAGGCAAAGAAGACAAGGAATCAAAGTCAGGTaGAACTATCACTTTCACAAA +
Preference number: 4 (lower is better)
Translates to: MHQGGRQTSFWQPRQRRQGIKVR*NYHFHK
Trigger: TTTGTGAAAGTGATAGTTTCACCTGACTTTGATTCC...TTGTCTTCTTTGCCTAGGTTGCCAAAAAGATGTTTGCCTTCCACCTTGATGCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR GCA 90 bp ATGCTAGGTTTGTTTCAGTTACCTGCAGCAATCAAAAAGCTTTGGCACCTTCTTTACATTTTGTTGCCCTaGATGTTATTGTCGGCTTTG +
Preference number: 4 (lower is better)
Translates to: MLGLFQLPAAIKKLWHLLYILLP*MLLSAL
Trigger: CAAAGCCGACAATAACATGCAGGGCAACAAAATGTA...AAGAAGGTGCCAAAGCTTTTTGATTGCTGCAGGTAACTGAAACAAACCTAGCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR GCA 90 bp ATGCTAGGTTTGTTTCAGTTACCTGCAGCAATCAAAAAGCTTTGGCACCTTCTTGTCTCTGAAGCCTTTTaGAAAGGGGTTATGATCAAT +
Preference number: 4 (lower is better)
Translates to: MLGLFQLPAAIKKLWHLLVSEAF*KGVMIN
Trigger: ATTGATCATAACCCCTTTGCAAAAGGCTTCAGAGAC...AAGAAGGTGCCAAAGCTTTTTGATTGCTGCAGGTAACTGAAACAAACCTAGCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR GCA 90 bp ATAGAAATGAGAATCAAAGGTTTTAACTCATCTGATAGCACTGGGCACCCAATGCATAATACCCTCCCATaGCTTTTGAGGTGTCTTTAC +
Preference number: 4 (lower is better)
Translates to: IEMRIKGFNSSDSTGHPMHNTLP*LLRCLY
Trigger: GTAAAGACACCTCAAAAGGCATGGGAGGGTATTATG...CATTGGGTGCCCAGTGCTATCAGATGAGTTAAAACCTTTGATTCTCATTTCTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR CCA 90 bp CAAATTCTTTACAAAGCCAAAGCACCAGTTTTACATTATCCCAGACACCTATGTTGCCGGAAAACTTCTTaGACGCTTTGTCTAAGTCCA +
Preference number: 4 (lower is better)
Translates to: QILYKAKAPVLHYPRHLCCRKTS*TLCLSP
Trigger: TGGACTTAGACAAAGCGTCCAAGAAGTTTTCCGGCA...ACATAGGTGTCTGGGATAATGTAAAACTGGTGCTTTGGCTTTGTAAAGAATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
CDS-3UTR CCA 90 bp ATGCATCAAGGTGGAAGGCAAACATCTTTTTGGCAACCTAGGCAAAGAAGACAATGTAAGACTATCATCTaGGTGTTGTTGTTATTTGCG +
Preference number: 4 (lower is better)
Translates to: MHQGGRQTSFWQPRQRRQCKTII*VLLLFA
Trigger: CGCAAATAACAACAACACCCAGATGATAGTCTTACA...TTGTCTTCTTTGCCTAGGTTGCCAAAAAGATGTTTGCCTTCCACCTTGATGCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR TCA 90 bp ATAGAAATGAGAATCAAAGGTTTTAACTCATCTGATAGCACTGGGCACCCAATGAATGAATTGCGTTTCTaGGAAGGTAAAAGTCTGGGT +
Preference number: 4 (lower is better)
Translates to: IEMRIKGFNSSDSTGHPMNELRF*EGKSLG
Trigger: ACCCAGACTTTTACCTTCTCAGAAACGCAATTCATT...CATTGGGTGCCCAGTGCTATCAGATGAGTTAAAACCTTTGATTCTCATTTCTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR TCA 90 bp ATCAAGGTGGAAGGCAAACATCTTTTTGGCAACCTAGGCAAAGAAGACAACAAAACACTTTATGGAGGGTaGATTTTCATTACTGGAGTT +
Preference number: 4 (lower is better)
Translates to: IKVEGKHLFGNLGKEDNKTLYGG*IFITGV
Trigger: AACTCCAGTAATGAAAATTCACCCTCCATAAAGTGT...TTTGTTGTCTTCTTTGCCTAGGTTGCCAAAAAGATGTTTGCCTTCCACCTTGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR TCA 90 bp ATCAAGGTGGAAGGCAAACATCTTTTTGGCAACCTAGGCAAAGAAGACAACAAACCTGCAGCTGTTAAGTaGTTTGCAAATTCTTTACAA +
Preference number: 4 (lower is better)
Translates to: IKVEGKHLFGNLGKEDNKPAAVK*FANSLQ
Trigger: TTGTAAAGAATTTGCAAATCACTTAACAGCTGCAGG...TTTGTTGTCTTCTTTGCCTAGGTTGCCAAAAAGATGTTTGCCTTCCACCTTGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
CDS-3UTR GCA 90 bp ATAGAAATGAGAATCAAAGGTTTTAACTCATCTGATAGCACTGGGCACCCAATGGGTGTTGTTGTTATTTaGGCCTTTGTTATTGGTGAG +
Preference number: 4 (lower is better)
Translates to: IEMRIKGFNSSDSTGHPMGVVVI*AFVIGE
Trigger: CTCACCAATAACAAAGGCGCAAATAACAACAACACC...CATTGGGTGCCCAGTGCTATCAGATGAGTTAAAACCTTTGATTCTCATTTCTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR GCA 90 bp ATAGAAATGAGAATCAAAGGTTTTAACTCATCTGATAGCACTGGGCACCCAATGGTAACTTCAACAATATaGAGTCGGGGTTGGTATTTG +
Preference number: 4 (lower is better)
Translates to: IEMRIKGFNSSDSTGHPMVTSTI*SRGWYL
Trigger: CAAATACCAACCCCGACTGCATATTGTTGAAGTTAC...CATTGGGTGCCCAGTGCTATCAGATGAGTTAAAACCTTTGATTCTCATTTCTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR CCA 90 bp ATGCATCAAGGTGGAAGGCAAACATCTTTTTGGCAACCTAGGCAAAGAAGACAAAGTATTAGGAGACTCTaGGTGAACATACATTTTGTT +
Preference number: 4 (lower is better)
Translates to: MHQGGRQTSFWQPRQRRQSIRRL*VNIHFV
Trigger: AACAAAATGTATGTTCACCCAGAGTCTCCTAATACT...TTGTCTTCTTTGCCTAGGTTGCCAAAAAGATGTTTGCCTTCCACCTTGATGCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR CCA 90 bp ATAGAAATGAGAATCAAAGGTTTTAACTCATCTGATAGCACTGGGCACCCAATGATATGCAGTCGGGGTTaGTATTTGTGTAAGGATTGT +
Preference number: 4 (lower is better)
Translates to: IEMRIKGFNSSDSTGHPMICSRG*YLCKDC
Trigger: ACAATCCTTACACAAATACCAACCCCGACTGCATAT...CATTGGGTGCCCAGTGCTATCAGATGAGTTAAAACCTTTGATTCTCATTTCTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR CCA 90 bp CTTTACAAAGCCAAAGCACCAGTTTTACATTATCCCAGACACCTATGTAGACTATTCGCTTACAAGCACTaGTGTATACTCCTGAATCAT +
Preference number: 4 (lower is better)
Translates to: LYKAKAPVLHYPRHLCRLFAYKH*CILLNH
Trigger: ATGATTCAGGAGTATACACCAGTGCTTGTAAGCGAA...TAGTCTACATAGGTGTCTGGGATAATGTAAAACTGGTGCTTTGGCTTTGTAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
CDS-3UTR CCA 90 bp CTTTGGCACCTTCTTTTAGAGAATTGCACAAAACAGGATGCATCAAGGTGGAAGGCAATCAAAAAGCTTTaGCACCTTCTTTTAGAGAAT +
Preference number: 4 (lower is better)
Translates to: LWHLLLENCTKQDASRWKAIKKL*HLLLEN
Trigger: ATTCTCTAAAAGAAGGTGCCAAAGCTTTTTGATTGC...CTTCCACCTTGATGCATCCTGTTTTGTGCAATTCTCTAAAAGAAGGTGCCAAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR CCA 90 bp ATGCATCAAGGTGGAAGGCAAACATCTTTTTGGCAACCTAGGCAAAGAAGACAAGCAATCAAAAAGCTTTaGCACCTTCTTTTAGAGAAT +
Preference number: 4 (lower is better)
Translates to: MHQGGRQTSFWQPRQRRQAIKKL*HLLLEN
Trigger: ATTCTCTAAAAGAAGGTGCCAAAGCTTTTTGATTGC...TTGTCTTCTTTGCCTAGGTTGCCAAAAAGATGTTTGCCTTCCACCTTGATGCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR CCA 90 bp CTTTACAAAGCCAAAGCACCAGTTTTACATTATCCCAGACACCTATGTAGACTATGTAAGACTATCATCTaGGTGTTGTTGTTATTTGCG +
Preference number: 4 (lower is better)
Translates to: LYKAKAPVLHYPRHLCRLCKTII*VLLLFA
Trigger: CGCAAATAACAACAACACCCAGATGATAGTCTTACA...TAGTCTACATAGGTGTCTGGGATAATGTAAAACTGGTGCTTTGGCTTTGTAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
CDS-3UTR CCA 90 bp CTTTACAAAGCCAAAGCACCAGTTTTACATTATCCCAGACACCTATGTAGACTATGTCCTCACACTTTATaGAGGGTGAATTTTCATTAC +
Preference number: 4 (lower is better)
Translates to: LYKAKAPVLHYPRHLCRLCPHTL*RVNFHY
Trigger: GTAATGAAAATTCACCCTCCATAAAGTGTGAGGACA...TAGTCTACATAGGTGTCTGGGATAATGTAAAACTGGTGCTTTGGCTTTGTAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
CDS-3UTR TCA 90 bp GATTTGCAAATTCTTTACAAAGCCAAAGCACCAGTTTTACATTATCCCAGACACGGAATCAAAGTCAGGTaGAACTATCACTTTCACAAA +
Preference number: 4 (lower is better)
Translates to: DLQILYKAKAPVLHYPRHGIKVR*NYHFHK
Trigger: TTTGTGAAAGTGATAGTTTCACCTGACTTTGATTCC...GTGTCTGGGATAATGTAAAACTGGTGCTTTGGCTTTGTAAAGAATTTGCAAATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
CDS GCA 90 bp CTGCTACCGCCCGCGCCACTGCCCGCACCGGCTCCTGGGCCGAACTaGGCCCTCCCGGGTGGGCACACAGCCGCGGGGAAGCCGCCGGGG +
Preference number: 5 (lower is better)
Translates to: LLPPAPLPAPAPGPN*ALPGGHTAAGKPPG
Trigger: CCCCGGCGGCTTCCCCGCGGCTGTGTGCCCACCCGGGAGGGCGCAGTTCGGCCCAGGAGCCGGTGCGGGCAGTGGCGCGGGCGGTAGCAG
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
CDS GCA 90 bp CCCCCTGGCTGTACTGATAGGTGCCCGGGCCGCCGCCCCCGCCGCTaGTACCGCCCGCGCCACTGCCCGCACCGGCTCCTGGGCCGAACT +
Preference number: 5 (lower is better)
Translates to: PPGCTDRCPGRRPRR*YRPRHCPHRLLGRT
Trigger: AGTTCGGCCCAGGAGCCGGTGCGGGCAGTGGCGCGGGCGGTAGCAGCGGCGGGGGCGGCGGCCCGGGCACCTATCAGTACAGCCAGGGGG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
CDS CCA 90 bp GGTAGTACCGCTCGGAGCTCAGGCTGTCCATGGAGTAGCGCGCAGTaGCCGCAGCCGCGGCGGCGGCGGCGGCGGCGGCTGCAGCGGCGG +
Preference number: 5 (lower is better)
Translates to: GSTARSSGCPWSSAQ*PQPRRRRRRRLQRR
Trigger: CCGCCGCTGCAGCCGCCGCCGCCGCCGCCGCCGCGGCTGCGGCCACTGCGCGCTACTCCATGGACAGCCTGAGCTCCGAGCGGTACTACC
78% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
CDS GCA 90 bp CCTCCCGCGCCGGGGCTACCCACCTGCCGACTCGCGGGCCGCTACTaGGCGTACTGGCGCGCCCTGAATCCAGCGTCCTTTCCGGAAGGA +
Preference number: 5 (lower is better)
Translates to: PPAPGLPTCRLAGRY*AYWRALNPASFPEG
Trigger: TCCTTCCGGAAAGGACGCTGGATTCAGGGCGCGCCAGTACGCGCAGTAGCGGCCCGCGAGTCGGCAGGTGGGTAGCCCCGGCGCGGGAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295743.8
CDS TCA 90 bp GCGCCTGCCGACTCGCGGGCCGCTACTGCGCGTACTGGCGCGCCCTaGATCCAGCGTCCTTTCCGGAAGGAAAGCGCCGTGAGTTGGAAA +
Preference number: 5 (lower is better)
Translates to: APADSRAATARTGAP*IQRPFRKESAVSWK
Trigger: TTTCCAACTCACGGCGCTTTCCTTCCGGAAAGGACGCTGGATTCAGGGCGCGCCAGTACGCGCAGTAGCGGCCCGCGAGTCGGCAGGCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461503.2
CDS CCA 90 bp AAGGAAACATGCGCCTGCCGACTCGCGGGCCGCTACTGCGCGTACTaGCGCGCCCTGAATCCAGCGTCCTTTCCGGAAGGAAAGCGCCGT +
Preference number: 5 (lower is better)
Translates to: KETCACRLAGRYCAY*RALNPASFPEGKRR
Trigger: ACGGCGCTTTCCTTCCGGAAAGGACGCTGGATTCAGGGCGCGCCAGTACGCGCAGTAGCGGCCCGCGAGTCGGCAGGCGCATGTTTCCTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461503.2
CDS CCA 90 bp GTGACAAGCCACCGCTGGGGAGGGTTGGCCACCTCTTCGCTCTGTTaGGGTGAAAGGAGGCCGTTGGTCTGTGGCACGGTTCTCTCGCCA +
Preference number: 5 (lower is better)
Translates to: VTSHRWGGLATSSLC*GERRPLVCGTVLSP
Trigger: TGGCGAGAGAACCGTGCCACAGACCAACGGCCTCCTTTCACCCCAACAGAGCGAAGAGGTGGCCAACCCTCCCCAGCGGTGGCTTGTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS GCA 90 bp CGCTGGCGGCTGCGGGCTCCCCGCTCACCGCCTCGCAGGAGAGACTaGCGGAAAACTTCTTGGACGCTTTGTCTAAGTCCAACTTCTGAG +
Preference number: 5 (lower is better)
Translates to: RWRLRAPRSPPRRRD*RKTSWTLCLSPTSE
Trigger: CTCAGAAGTTGGACTTAGACAAAGCGTCCAAGAAGTTTTCCGGCAGTCTCTCCTGCGAGGCGGTGAGCGGGGAGCCCGCAGCCGCCAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
CDS GCA 90 bp GCGCCAGGCAGGTTCACTGAGCTCACCAAGAGCTGCTCCCCTAACTaGATGCTTTGCAAAGCGCAGACGGCAGCTGGCTGCTTCCTCTCC +
Preference number: 5 (lower is better)
Translates to: APGRFTELTKSCSPN*MLCKAQTAAGCFLS
Trigger: GGAGAGGAAGCAGCCAGCTGCCGTCTGCGCTTTGCAAAGCATGCAGTTAGGGGAGCAGCTCTTGGTGAGCTCAGTGAACCTGCCTGGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295743.8
CDS CCA 90 bp GCTTTGCAAAGCGCAGACGGCAGCTGGCTGCTTCCTCTCCTCCGGTaGCCTTATTATAAAGGCAGGATGGGGGAGCCAGCGCCCTCTTCC +
Preference number: 5 (lower is better)
Translates to: ALQSADGSWLLPLLR*PYYKGRMGEPAPSS
Trigger: GGAAGAGGGCGCTGGCTCCCCCATCCTGCCTTTATAATAAGGCCACCGGAGGAGAGGAAGCAGCCAGCTGCCGTCTGCGCTTTGCAAAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295743.8
CDS CCA 90 bp AGTTTGTTGGTCCCAGGTTGCTGGACAGGCGTGACAAGCCACCGCTaGGGAGGGTTGGCCACCTCTTCGCTCTGTTGGGGTGAAAGGAGG +
Preference number: 5 (lower is better)
Translates to: SLLVPGCWTGVTSHR*GGLATSSLCWGERR
Trigger: CCTCCTTTCACCCCAACAGAGCGAAGAGGTGGCCAACCCTCCCCAGCGGTGGCTTGTCACGCCTGTCCAGCAACCTGGGACCAACAAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS TCA 90 bp AAGCCACCGCTGGGGAGGGTTGGCCACCTCTTCGCTCTGTTGGGGTaGAAGGAGGCCGTTGGTCTGTGGCACGGTTCTCTCGCCATTATA +
Preference number: 5 (lower is better)
Translates to: KPPLGRVGHLFALLG*KEAVGLWHGSLAII
Trigger: TATAATGGCGAGAGAACCGTGCCACAGACCAACGGCCTCCTTTCACCCCAACAGAGCGAAGAGGTGGCCAACCCTCCCCAGCGGTGGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS TCA 90 bp CTGGCGCGCCCTGAATCCAGCGTCCTTTCCGGAAGGAAAGCGCCGTaGGTTGGAAAGCAGGAGGTGGAAACTAACCCAGAAGCCCTCTCC +
Preference number: 5 (lower is better)
Translates to: LARPESSVLSGRKAP*VGKQEVETNPEALS
Trigger: GGAGAGGGCTTCTGGGTTAGTTTCCACCTCCTGCTTTCCAACTCACGGCGCTTTCCTTCCGGAAAGGACGCTGGATTCAGGGCGCGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461503.2
CDS GCA 90 bp TGCTCCCCTAACTGCATGCTTTGCAAAGCGCAGACGGCAGCTGGCTaGTTCCTCTCCTCCGGTGGCCTTATTATAAAGGCAGGATGGGGG +
Preference number: 5 (lower is better)
Translates to: CSPNCMLCKAQTAAG*FLSSGGLIIKAGWG
Trigger: CCCCCATCCTGCCTTTATAATAAGGCCACCGGAGGAGAGGAAGCAGCCAGCTGCCGTCTGCGCTTTGCAAAGCATGCAGTTAGGGGAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295743.8
CDS GCA 90 bp TCCAGCTGCCATCTTCCTCTGGTAAGAACCTCGACCTCCCCACCCTaGCATTGCAGGAAAGGTTGGGTCTGGGTAATACCCCAGGGCATG +
Preference number: 5 (lower is better)
Translates to: SSCHLPLVRTSTSPP*HCRKGWVWVIPQGM
Trigger: CATGCCCTGGGGTATTACCCAGACCCAACCTTTCCTGCAATGGCAGGGTGGGGAGGTCGAGGTTCTTACCAGAGGAAGATGGCAGCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS CCA 90 bp GAGGGTTGGCCACCTCTTCGCTCTGTTGGGGTGAAAGGAGGCCGTTaGTCTGTGGCACGGTTCTCTCGCCATTATAATAGCGGGCTTGAG +
Preference number: 5 (lower is better)
Translates to: EGWPPLRSVGVKGGR*SVARFSRHYNSGLE
Trigger: CTCAAGCCCGCTATTATAATGGCGAGAGAACCGTGCCACAGACCAACGGCCTCCTTTCACCCCAACAGAGCGAAGAGGTGGCCAACCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS GCA 90 bp TGCCATCTTCCTCTGGTAAGAACCTCGACCTCCCCACCCTGCCATTaGAGGAAAGGTTGGGTCTGGGTAATACCCCAGGGCATGGGATGT +
Preference number: 5 (lower is better)
Translates to: CHLPLVRTSTSPPCH*RKGWVWVIPQGMGC
Trigger: ACATCCCATGCCCTGGGGTATTACCCAGACCCAACCTTTCCTGCAATGGCAGGGTGGGGAGGTCGAGGTTCTTACCAGAGGAAGATGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS CCA 90 bp GCGTCCTTTCCGGAAGGAAAGCGCCGTGAGTTGGAAAGCAGGAGGTaGAAACTAACCCAGAAGCCCTCTCCTTTTCCTTCCTCGTACCTC +
Preference number: 5 (lower is better)
Translates to: ASFPEGKRRELESRR*KLTQKPSPFPSSYL
Trigger: GAGGTACGAGGAAGGAAAAGGAGAGGGCTTCTGGGTTAGTTTCCACCTCCTGCTTTCCAACTCACGGCGCTTTCCTTCCGGAAAGGACGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461503.2
CDS-3UTR CAA 90 bp GCAGAATGTAACAGCAAAATGTCTCCTTCTGAAACGGAAGGCACAGCCCTCTTTTGGAAGCGCCAGTGGTaGGGGTCCGCCAGCACCACC +
Preference number: 5 (lower is better)
Translates to: AECNSKMSPSETEGTALFWKRQW*GSASTT
Trigger: GGTGGTGCTGGCGGACCCCAACCACTGGCGCTTCCA...AAAGAGGGCTGTGCCTTCCGTTTCAGAAGGAGACATTTTGCTGTTACATTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR CAA 90 bp AGCAAAATGTCTCCTTCTGAAACGGAAGGCACAGCCCTCTTTCAGAAGCAAAACTGGAAGCGCCAGTGGTaGGGGTCCGCCAGCACCACC +
Preference number: 5 (lower is better)
Translates to: SKMSPSETEGTALFQKQNWKRQW*GSASTT
Trigger: GGTGGTGCTGGCGGACCCCAACCACTGGCGCTTCCA...GTTTTGCTTCTGAAAGAGGGCTGTGCCTTCCGTTTCAGAAGGAGACATTTTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR CAA 90 bp AGGCCTAGCAAGTCTCAAGTGAGGCAATCCTGGACTAGGGCAAACATGGCTTGTGGTGAAAGGAGGCCGTaGGTCTGTGGCACGGTTCTC +
Preference number: 5 (lower is better)
Translates to: RPSKSQVRQSWTRANMACGERRP*VCGTVL
Trigger: GAGAACCGTGCCACAGACCAACGGCCTCCTTTCACC...ACAAGCCATGTTTGCCCTAGTCCAGGATTGCCTCACTTGAGACTTGCTAGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
CDS-3UTR CAA 90 bp ACTGGGCACCCAATGTTCACAGCCTGCTTCTTTGAAGGGTTAGTGTCTCCCCAAGGTGAAAGGAGGCCGTaGGTCTGTGGCACGGTTCTC +
Preference number: 5 (lower is better)
Translates to: TGHPMFTACFFEGLVSPQGERRP*VCGTVL
Trigger: GAGAACCGTGCCACAGACCAACGGCCTCCTTTCACC...TTGGGGAGACACTAACCCTTCAAAGAAGCAGGCTGTGAACATTGGGTGCCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS TCA 90 bp GCACGGTTCTCTCGCCATTATAATAGCGGGCTTGAGGTAAAGTGTTaGCAAAGGGCTCCGGGAAGAAGGATTGAACGCCGTACCGACCTC +
Preference number: 5 (lower is better)
Translates to: ARFSRHYNSGLEVKC*QRAPGRRIERRTDL
Trigger: GAGGTCGGTACGGCGTTCAATCCTTCTTCCCGGAGCCCTTTGTCAACACTTTACCTCAAGCCCGCTATTATAATGGCGAGAGAACCGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR CAA 90 bp GTAACAGCAAAATGTCTCCTTCTGAAACGGAAGGCACAGCCCTCTTTCAGAAGCCTCCGGGAAGAAGGATaGAACGCCGTACCGACCTCC +
Preference number: 5 (lower is better)
Translates to: VTAKCLLLKRKAQPSFRSLREEG*NAVPTS
Trigger: GGAGGTCGGTACGGCGTTCAATCCTTCTTCCCGGAG...GCTTCTGAAAGAGGGCTGTGCCTTCCGTTTCAGAAGGAGACATTTTGCTGTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR CAA 90 bp GTAACAGCAAAATGTCTCCTTCTGAAACGGAAGGCACAGCCCTCTTTCAGAAGCCTCCCCACCCTGCCATaGCAGGAAAGGTTGGGTCTG +
Preference number: 5 (lower is better)
Translates to: VTAKCLLLKRKAQPSFRSLPTLP*QERLGL
Trigger: CAGACCCAACCTTTCCTGCAATGGCAGGGTGGGGAG...GCTTCTGAAAGAGGGCTGTGCCTTCCGTTTCAGAAGGAGACATTTTGCTGTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR CAA 90 bp CAGAGGCCTAGCAAGTCTCAAGTGAGGCAATCCTGGACTAGGGCAAACATGGCTAGAACACAGTGGGGCTaGTTCTGGAGGTCCATGGTA +
Preference number: 5 (lower is better)
Translates to: QRPSKSQVRQSWTRANMARTQWG*FWRSMV
Trigger: TACCATGGACCTCCAGAACAAGCCCCACTGTGTTCT...AGCCATGTTTGCCCTAGTCCAGGATTGCCTCACTTGAGACTTGCTAGGCCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
CDS CCA 90 bp TCTCCTTGGAGAGCTGATCTTCAGAGAACACAGTGGGGCTTGTTCTaGAGGTCCATGGTAGTCCAGCTGCCATCTTCCTCTGGTAAGAAC +
Preference number: 5 (lower is better)
Translates to: SPWRADLQRTQWGLF*RSMVVQLPSSSGKN
Trigger: GTTCTTACCAGAGGAAGATGGCAGCTGGACTACCATGGACCTCCAGAACAAGCCCCACTGTGTTCTCTGAAGATCAGCTCTCCAAGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR CAA 90 bp GGATGCATCAAGGTGGAAGGCAAACATCTTTTTGGCAACCTAGGCAAAGAAGACTGGTGGCGGTGGAATTaGAGCCACAGAGGCCGGTTG +
Preference number: 5 (lower is better)
Translates to: GCIKVEGKHLFGNLGKEDWWRWN*SHRGRL
Trigger: CAACCGGCCTCTGTGGCTCAAATTCCACCGCCACCA...GTCTTCTTTGCCTAGGTTGCCAAAAAGATGTTTGCCTTCCACCTTGATGCATCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
CDS-3UTR CAA 90 bp ACTCTCCCCTTGCCCCTGCAGCTGTTAAGTGATTTGCAAATTCTTTACAAAGCCTGGTGGCGGTGGAATTaGAGCCACAGAGGCCGGTTG +
Preference number: 5 (lower is better)
Translates to: TLPLPLQLLSDLQILYKAWWRWN*SHRGRL
Trigger: CAACCGGCCTCTGTGGCTCAAATTCCACCGCCACCA...GGCTTTGTAAAGAATTTGCAAATCACTTAACAGCTGCAGGGGCAAGGGGAGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
CDS-3UTR CAA 90 bp ATGCTAGGTTTGTTTCAGTTACCTGCAGCAATCAAAAAGCTTTGGCACCTTCTTTGGAAGCGCCAGTGGTaGGGGTCCGCCAGCACCACC +
Preference number: 5 (lower is better)
Translates to: MLGLFQLPAAIKKLWHLLWKRQW*GSASTT
Trigger: GGTGGTGCTGGCGGACCCCAACCACTGGCGCTTCCA...AAGAAGGTGCCAAAGCTTTTTGATTGCTGCAGGTAACTGAAACAAACCTAGCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR CAA 90 bp GGATGCATCAAGGTGGAAGGCAAACATCTTTTTGGCAACCTAGGCAAAGAAGACCTCCGGGAAGAAGGATaGAACGCCGTACCGACCTCC +
Preference number: 5 (lower is better)
Translates to: GCIKVEGKHLFGNLGKEDLREEG*NAVPTS
Trigger: GGAGGTCGGTACGGCGTTCAATCCTTCTTCCCGGAG...GTCTTCTTTGCCTAGGTTGCCAAAAAGATGTTTGCCTTCCACCTTGATGCATCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR CAA 90 bp GGAAGGCACAGCCCTCTTTCAGAAGCAAAACACCTTAACACTCGGCTTCTATTTGGTGAAAGGAGGCCGTaGGTCTGTGGCACGGTTCTC +
Preference number: 5 (lower is better)
Translates to: GRHSPLSEAKHLNTRLLFGERRP*VCGTVL
Trigger: GAGAACCGTGCCACAGACCAACGGCCTCCTTTCACC...AAATAGAAGCCGAGTGTTAAGGTGTTTTGCTTCTGAAAGAGGGCTGTGCCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR CAA 90 bp GTAACAGCAAAATGTCTCCTTCTGAAACGGAAGGCACAGCCCTCTTTCAGAAGCTTTGTTGGTCCCAGGTaGCTGGACAGGCGTGACAAG +
Preference number: 5 (lower is better)
Translates to: VTAKCLLLKRKAQPSFRSFVGPR*LDRRDK
Trigger: CTTGTCACGCCTGTCCAGCAACCTGGGACCAACAAA...GCTTCTGAAAGAGGGCTGTGCCTTCCGTTTCAGAAGGAGACATTTTGCTGTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR CAA 90 bp ACTGGGCACCCAATGTTCACAGCCTGCTTCTTTGAAGGGTTAGTGTCTCCCCAACTGATGTCTAGTTTGTaGGTCCCAGGTTGCTGGACA +
Preference number: 5 (lower is better)
Translates to: TGHPMFTACFFEGLVSPQLMSSL*VPGCWT
Trigger: TGTCCAGCAACCTGGGACCAACAAACTAGACATCAG...TTGGGGAGACACTAACCCTTCAAAGAAGCAGGCTGTGAACATTGGGTGCCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR CAA 90 bp CAGAGGCCTAGCAAGTCTCAAGTGAGGCAATCCTGGACTAGGGCAAACATGGCTTCACAAAAGCTTTTCTaGACTCCTGGGCCTAGTATC +
Preference number: 5 (lower is better)
Translates to: QRPSKSQVRQSWTRANMASQKLF*TPGPSI
Trigger: GATACTAGGCCCAGGAGTCAAGAAAAGCTTTTGTGA...AGCCATGTTTGCCCTAGTCCAGGATTGCCTCACTTGAGACTTGCTAGGCCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
CDS-3UTR CAA 90 bp AGCAAAATGTCTCCTTCTGAAACGGAAGGCACAGCCCTCTTTCAGAAGCAAAACGGAAAGCGCCGTGAGTaGGAAAGCAGGAGGTGGAAA +
Preference number: 5 (lower is better)
Translates to: SKMSPSETEGTALFQKQNGKRRE*ESRRWK
Trigger: TTTCCACCTCCTGCTTTCCAACTCACGGCGCTTTCC...GTTTTGCTTCTGAAAGAGGGCTGTGCCTTCCGTTTCAGAAGGAGACATTTTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461503.2
CDS-3UTR CAA 90 bp CAAAACAGGATGCATCAAGGTGGAAGGCAAACATCTTTTTGGCAACCTAGGCAATTTGTTGGTCCCAGGTaGCTGGACAGGCGTGACAAG +
Preference number: 5 (lower is better)
Translates to: QNRMHQGGRQTSFWQPRQFVGPR*LDRRDK
Trigger: CTTGTCACGCCTGTCCAGCAACCTGGGACCAACAAA...TTGCCTAGGTTGCCAAAAAGATGTTTGCCTTCCACCTTGATGCATCCTGTTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR CAA 90 bp CCTTCTGAAACGGAAGGCACAGCCCTCTTTCAGAAGCAAAACACCTTAACACTCCTGATGTCTAGTTTGTaGGTCCCAGGTTGCTGGACA +
Preference number: 5 (lower is better)
Translates to: PSETEGTALFQKQNTLTLLMSSL*VPGCWT
Trigger: TGTCCAGCAACCTGGGACCAACAAACTAGACATCAG...GAGTGTTAAGGTGTTTTGCTTCTGAAAGAGGGCTGTGCCTTCCGTTTCAGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR CAA 90 bp CCTTCTGAAACGGAAGGCACAGCCCTCTTTCAGAAGCAAAACACCTTAACACTCGAACTGATGTCTAGTTaGTTGGTCCCAGGTTGCTGG +
Preference number: 5 (lower is better)
Translates to: PSETEGTALFQKQNTLTLELMSS*LVPGCW
Trigger: CCAGCAACCTGGGACCAACAAACTAGACATCAGTTC...GAGTGTTAAGGTGTTTTGCTTCTGAAAGAGGGCTGTGCCTTCCGTTTCAGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR CAA 90 bp GTAACAGCAAAATGTCTCCTTCTGAAACGGAAGGCACAGCCCTCTTTCAGAAGCGAACTGATGTCTAGTTaGTTGGTCCCAGGTTGCTGG +
Preference number: 5 (lower is better)
Translates to: VTAKCLLLKRKAQPSFRSELMSS*LVPGCW
Trigger: CCAGCAACCTGGGACCAACAAACTAGACATCAGTTC...GCTTCTGAAAGAGGGCTGTGCCTTCCGTTTCAGAAGGAGACATTTTGCTGTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR CAA 90 bp ATGCTAGGTTTGTTTCAGTTACCTGCAGCAATCAAAAAGCTTTGGCACCTTCTTCTCCCCACCCTGCCATaGCAGGAAAGGTTGGGTCTG +
Preference number: 5 (lower is better)
Translates to: MLGLFQLPAAIKKLWHLLLPTLP*QERLGL
Trigger: CAGACCCAACCTTTCCTGCAATGGCAGGGTGGGGAG...AAGAAGGTGCCAAAGCTTTTTGATTGCTGCAGGTAACTGAAACAAACCTAGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR CAA 90 bp TCAAAGGTTTTAACTCATCTGATAGCACTGGGCACCCAATGTTCACAGCCTGCTAGAACACAGTGGGGCTaGTTCTGGAGGTCCATGGTA +
Preference number: 5 (lower is better)
Translates to: SKVLTHLIALGTQCSQPARTQWG*FWRSMV
Trigger: TACCATGGACCTCCAGAACAAGCCCCACTGTGTTCT...AGCAGGCTGTGAACATTGGGTGCCCAGTGCTATCAGATGAGTTAAAACCTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR CAA 90 bp AGGCCTAGCAAGTCTCAAGTGAGGCAATCCTGGACTAGGGCAAACATGGCTTGTTTGGAATCTAGAGATTaGATGGAAGGGGGTGTCTCT +
Preference number: 5 (lower is better)
Translates to: RPSKSQVRQSWTRANMACLESRD*MEGGVS
Trigger: AGAGACACCCCCTTCCATCAAATCTCTAGATTCCAA...ACAAGCCATGTTTGCCCTAGTCCAGGATTGCCTCACTTGAGACTTGCTAGGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
CDS-3UTR CAA 90 bp AGGCCTAGCAAGTCTCAAGTGAGGCAATCCTGGACTAGGGCAAACATGGCTTGTACCCTCCCATGCCTTTaGAGGTGTCTTTACTATACT +
Preference number: 5 (lower is better)
Translates to: RPSKSQVRQSWTRANMACTLPCL*RCLYYT
Trigger: AGTATAGTAAAGACACCTCAAAAGGCATGGGAGGGT...ACAAGCCATGTTTGCCCTAGTCCAGGATTGCCTCACTTGAGACTTGCTAGGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
CDS TCA 90 bp ATCCAAGAAGAGCCAATTTCCTCTTTCACTTTCTCCTTGGAGAGCTaGTCTTCAGAGAACACAGTGGGGCTTGTTCTGGAGGTCCATGGT +
Preference number: 5 (lower is better)
Translates to: IQEEPISSFTFSLES*SSENTVGLVLEVHG
Trigger: ACCATGGACCTCCAGAACAAGCCCCACTGTGTTCTCTGAAGATCAGCTCTCCAAGGAGAAAGTGAAAGAGGAAATTGGCTCTTCTTGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS CCA 90 bp GTGTCTCTATCCAAGAAGAGCCAATTTCCTCTTTCACTTTCTCCTTaGAGAGCTGATCTTCAGAGAACACAGTGGGGCTTGTTCTGGAGG +
Preference number: 5 (lower is better)
Translates to: VSLSKKSQFPLSLSP*RADLQRTQWGLFWR
Trigger: CCTCCAGAACAAGCCCCACTGTGTTCTCTGAAGATCAGCTCTCCAAGGAGAAAGTGAAAGAGGAAATTGGCTCTTCTTGGATAGAGACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR CAA 90 bp CAAAACAGGATGCATCAAGGTGGAAGGCAAACATCTTTTTGGCAACCTAGGCAATTGCCCTGCATGTTATaGTCGGCTTTGCCACAGGTC +
Preference number: 5 (lower is better)
Translates to: QNRMHQGGRQTSFWQPRQLPCML*SALPQV
Trigger: GACCTGTGGCAAAGCCGACAATAACATGCAGGGCAA...TTGCCTAGGTTGCCAAAAAGATGTTTGCCTTCCACCTTGATGCATCCTGTTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR CAA 90 bp CTTTGGCACCTTCTTTTAGAGAATTGCACAAAACAGGATGCATCAAGGTGGAAGTTTGTTGGTCCCAGGTaGCTGGACAGGCGTGACAAG +
Preference number: 5 (lower is better)
Translates to: LWHLLLENCTKQDASRWKFVGPR*LDRRDK
Trigger: CTTGTCACGCCTGTCCAGCAACCTGGGACCAACAAA...CTTCCACCTTGATGCATCCTGTTTTGTGCAATTCTCTAAAAGAAGGTGCCAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR CAA 90 bp GGAAGGCACAGCCCTCTTTCAGAAGCAAAACACCTTAACACTCGGCTTCTATTTCTGATGTCTAGTTTGTaGGTCCCAGGTTGCTGGACA +
Preference number: 5 (lower is better)
Translates to: GRHSPLSEAKHLNTRLLFLMSSL*VPGCWT
Trigger: TGTCCAGCAACCTGGGACCAACAAACTAGACATCAG...AAATAGAAGCCGAGTGTTAAGGTGTTTTGCTTCTGAAAGAGGGCTGTGCCTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR CAA 90 bp AGCAAAATGTCTCCTTCTGAAACGGAAGGCACAGCCCTCTTTCAGAAGCAAAACGAACTGATGTCTAGTTaGTTGGTCCCAGGTTGCTGG +
Preference number: 5 (lower is better)
Translates to: SKMSPSETEGTALFQKQNELMSS*LVPGCW
Trigger: CCAGCAACCTGGGACCAACAAACTAGACATCAGTTC...GTTTTGCTTCTGAAAGAGGGCTGTGCCTTCCGTTTCAGAAGGAGACATTTTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR CAA 90 bp GTAACAGCAAAATGTCTCCTTCTGAAACGGAAGGCACAGCCCTCTTTCAGAAGCTTTTCATTACTGGAGTaGCTAGGAGACAGCCGCCTT +
Preference number: 5 (lower is better)
Translates to: VTAKCLLLKRKAQPSFRSFSLLE*LGDSRL
Trigger: AAGGCGGCTGTCTCCTAGCAACTCCAGTAATGAAAA...GCTTCTGAAAGAGGGCTGTGCCTTCCGTTTCAGAAGGAGACATTTTGCTGTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR CAA 90 bp AGGCCTAGCAAGTCTCAAGTGAGGCAATCCTGGACTAGGGCAAACATGGCTTGTTTGAGTCCGTTTATGTaGAAGCTCAAGAAAGGAAAC +
Preference number: 5 (lower is better)
Translates to: RPSKSQVRQSWTRANMACLSPFM*KLKKGN
Trigger: GTTTCCTTTCTTGAGCTTCAACATAAACGGACTCAA...ACAAGCCATGTTTGCCCTAGTCCAGGATTGCCTCACTTGAGACTTGCTAGGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
CDS-3UTR CAA 90 bp GGATGCATCAAGGTGGAAGGCAAACATCTTTTTGGCAACCTAGGCAAAGAAGACATGTTATTGTCGGCTTaGCCACAGGTCACCCATTTG +
Preference number: 5 (lower is better)
Translates to: GCIKVEGKHLFGNLGKEDMLLSA*PQVTHL
Trigger: CAAATGGGTGACCTGTGGCAAAGCCGACAATAACAT...GTCTTCTTTGCCTAGGTTGCCAAAAAGATGTTTGCCTTCCACCTTGATGCATCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR CAA 90 bp CTTTGGCACCTTCTTTTAGAGAATTGCACAAAACAGGATGCATCAAGGTGGAAGTTGCCCTGCATGTTATaGTCGGCTTTGCCACAGGTC +
Preference number: 5 (lower is better)
Translates to: LWHLLLENCTKQDASRWKLPCML*SALPQV
Trigger: GACCTGTGGCAAAGCCGACAATAACATGCAGGGCAA...CTTCCACCTTGATGCATCCTGTTTTGTGCAATTCTCTAAAAGAAGGTGCCAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR CAA 90 bp AGGCCTAGCAAGTCTCAAGTGAGGCAATCCTGGACTAGGGCAAACATGGCTTGTTTTGCGCCTTTGTTATaGGTGAGTTTTAATTTCCCG +
Preference number: 5 (lower is better)
Translates to: RPSKSQVRQSWTRANMACFAPLL*VSFNFP
Trigger: CGGGAAATTAAAACTCACCAATAACAAAGGCGCAAA...ACAAGCCATGTTTGCCCTAGTCCAGGATTGCCTCACTTGAGACTTGCTAGGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
CDS-3UTR CAA 90 bp GATTTGCAAATTCTTTACAAAGCCAAAGCACCAGTTTTACATTATCCCAGACACCTCCGGGAAGAAGGATaGAACGCCGTACCGACCTCC +
Preference number: 5 (lower is better)
Translates to: DLQILYKAKAPVLHYPRHLREEG*NAVPTS
Trigger: GGAGGTCGGTACGGCGTTCAATCCTTCTTCCCGGAG...GTGTCTGGGATAATGTAAAACTGGTGCTTTGGCTTTGTAAAGAATTTGCAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
CDS-3UTR CAA 90 bp GATTTGCAAATTCTTTACAAAGCCAAAGCACCAGTTTTACATTATCCCAGACACCTCCCCACCCTGCCATaGCAGGAAAGGTTGGGTCTG +
Preference number: 5 (lower is better)
Translates to: DLQILYKAKAPVLHYPRHLPTLP*QERLGL
Trigger: CAGACCCAACCTTTCCTGCAATGGCAGGGTGGGGAG...GTGTCTGGGATAATGTAAAACTGGTGCTTTGGCTTTGTAAAGAATTTGCAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
CDS-3UTR CAA 90 bp GCAGAATGTAACAGCAAAATGTCTCCTTCTGAAACGGAAGGCACAGCCCTCTTTTTTTCATTACTGGAGTaGCTAGGAGACAGCCGCCTT +
Preference number: 5 (lower is better)
Translates to: AECNSKMSPSETEGTALFFSLLE*LGDSRL
Trigger: AAGGCGGCTGTCTCCTAGCAACTCCAGTAATGAAAA...AAAGAGGGCTGTGCCTTCCGTTTCAGAAGGAGACATTTTGCTGTTACATTCTGC
47% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR CAA 90 bp GTAACAGCAAAATGTCTCCTTCTGAAACGGAAGGCACAGCCCTCTTTCAGAAGCTCACAAAAGCTTTTCTaGACTCCTGGGCCTAGTATC +
Preference number: 5 (lower is better)
Translates to: VTAKCLLLKRKAQPSFRSSQKLF*TPGPSI
Trigger: GATACTAGGCCCAGGAGTCAAGAAAAGCTTTTGTGA...GCTTCTGAAAGAGGGCTGTGCCTTCCGTTTCAGAAGGAGACATTTTGCTGTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS CCA 90 bp CCCCAGGGCATGGGATGTCTGAAGGGGCAAGGATTTAATGCCATATaGGAGCAATGTGCTAGAAGTATATTCAGATTCATAGGAACTGAT +
Preference number: 5 (lower is better)
Translates to: PQGMGCLKGQGFNAI*EQCARSIFRFIGTD
Trigger: ATCAGTTCCTATGAATCTGAATATACTTCTAGCACATTGCTCCCATATGGCATTAAATCCTTGCCCCTTCAGACATCCCATGCCCTGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR CAA 90 bp CTTTGGCACCTTCTTTTAGAGAATTGCACAAAACAGGATGCATCAAGGTGGAAGCTGCCGGAAAACTTCTaGGACGCTTTGTCTAAGTCC +
Preference number: 5 (lower is better)
Translates to: LWHLLLENCTKQDASRWKLPENF*DALSKS
Trigger: GGACTTAGACAAAGCGTCCAAGAAGTTTTCCGGCAG...CTTCCACCTTGATGCATCCTGTTTTGTGCAATTCTCTAAAAGAAGGTGCCAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
CDS-3UTR CAA 90 bp CAAAACAGGATGCATCAAGGTGGAAGGCAAACATCTTTTTGGCAACCTAGGCAAATGTTATTGTCGGCTTaGCCACAGGTCACCCATTTG +
Preference number: 5 (lower is better)
Translates to: QNRMHQGGRQTSFWQPRQMLLSA*PQVTHL
Trigger: CAAATGGGTGACCTGTGGCAAAGCCGACAATAACAT...TTGCCTAGGTTGCCAAAAAGATGTTTGCCTTCCACCTTGATGCATCCTGTTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR CAA 90 bp CCTTCTGAAACGGAAGGCACAGCCCTCTTTCAGAAGCAAAACACCTTAACACTCACTATCATCTGGGTGTaGTTGTTATTTGCGCCTTTG +
Preference number: 5 (lower is better)
Translates to: PSETEGTALFQKQNTLTLTIIWV*LLFAPL
Trigger: CAAAGGCGCAAATAACAACAACACCCAGATGATAGT...GAGTGTTAAGGTGTTTTGCTTCTGAAAGAGGGCTGTGCCTTCCGTTTCAGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR CAA 90 bp GTAACAGCAAAATGTCTCCTTCTGAAACGGAAGGCACAGCCCTCTTTCAGAAGCACTATCATCTGGGTGTaGTTGTTATTTGCGCCTTTG +
Preference number: 5 (lower is better)
Translates to: VTAKCLLLKRKAQPSFRSTIIWV*LLFAPL
Trigger: CAAAGGCGCAAATAACAACAACACCCAGATGATAGT...GCTTCTGAAAGAGGGCTGTGCCTTCCGTTTCAGAAGGAGACATTTTGCTGTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR CAA 90 bp ATGCTAGGTTTGTTTCAGTTACCTGCAGCAATCAAAAAGCTTTGGCACCTTCTTAGAACACAGTGGGGCTaGTTCTGGAGGTCCATGGTA +
Preference number: 5 (lower is better)
Translates to: MLGLFQLPAAIKKLWHLLRTQWG*FWRSMV
Trigger: TACCATGGACCTCCAGAACAAGCCCCACTGTGTTCT...AAGAAGGTGCCAAAGCTTTTTGATTGCTGCAGGTAACTGAAACAAACCTAGCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR CAA 90 bp AGGCCTAGCAAGTCTCAAGTGAGGCAATCCTGGACTAGGGCAAACATGGCTTGTCAGCTGTTAAGTGATTaGCAAATTCTTTACAAAGCC +
Preference number: 5 (lower is better)
Translates to: RPSKSQVRQSWTRANMACQLLSD*QILYKA
Trigger: GGCTTTGTAAAGAATTTGCAAATCACTTAACAGCTG...ACAAGCCATGTTTGCCCTAGTCCAGGATTGCCTCACTTGAGACTTGCTAGGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
CDS-3UTR CAA 90 bp GGATGCATCAAGGTGGAAGGCAAACATCTTTTTGGCAACCTAGGCAAAGAAGACTCTGCCCTTTTTCAATaGCCAAAGCATCGGTCAAGT +
Preference number: 5 (lower is better)
Translates to: GCIKVEGKHLFGNLGKEDSALFQ*PKHRSS
Trigger: ACTTGACCGATGCTTTGGCAATTGAAAAAGGGCAGA...GTCTTCTTTGCCTAGGTTGCCAAAAAGATGTTTGCCTTCCACCTTGATGCATCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000461503.2
CDS GCA 90 bp GGCTCATTCAAGTCCTCCACGCCATCCTCTGTAACTTCAACAATATaGAGTCGGGGTTGGTATTTGTGTAAGGATTGTAAGACTATCATC +
Preference number: 5 (lower is better)
Translates to: GSFKSSTPSSVTSTI*SRGWYLCKDCKTII
Trigger: GATGATAGTCTTACAATCCTTACACAAATACCAACCCCGACTGCATATTGTTGAAGTTACAGAGGATGGCGTGGAGGACTTGAATGAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS CCA 90 bp TCCTCCACGCCATCCTCTGTAACTTCAACAATATGCAGTCGGGGTTaGTATTTGTGTAAGGATTGTAAGACTATCATCTGGGTGTTGTTG +
Preference number: 5 (lower is better)
Translates to: SSTPSSVTSTICSRG*YLCKDCKTIIWVLL
Trigger: CAACAACACCCAGATGATAGTCTTACAATCCTTACACAAATACCAACCCCGACTGCATATTGTTGAAGTTACAGAGGATGGCGTGGAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR CAA 90 bp CTTTACAAAGCCAAAGCACCAGTTTTACATTATCCCAGACACCTATGTAGACTATTGCCCTGCATGTTATaGTCGGCTTTGCCACAGGTC +
Preference number: 5 (lower is better)
Translates to: LYKAKAPVLHYPRHLCRLLPCML*SALPQV
Trigger: GACCTGTGGCAAAGCCGACAATAACATGCAGGGCAA...TAGTCTACATAGGTGTCTGGGATAATGTAAAACTGGTGCTTTGGCTTTGTAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
CDS-3UTR CAA 90 bp GTAACAGCAAAATGTCTCCTTCTGAAACGGAAGGCACAGCCCTCTTTCAGAAGCTTTGCGCCTTTGTTATaGGTGAGTTTTAATTTCCCG +
Preference number: 5 (lower is better)
Translates to: VTAKCLLLKRKAQPSFRSFAPLL*VSFNFP
Trigger: CGGGAAATTAAAACTCACCAATAACAAAGGCGCAAA...GCTTCTGAAAGAGGGCTGTGCCTTCCGTTTCAGAAGGAGACATTTTGCTGTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR CAA 90 bp GTAACAGCAAAATGTCTCCTTCTGAAACGGAAGGCACAGCCCTCTTTCAGAAGCATCATCTGGGTGTTGTaGTTATTTGCGCCTTTGTTA +
Preference number: 5 (lower is better)
Translates to: VTAKCLLLKRKAQPSFRSIIWVL*LFAPLL
Trigger: TAACAAAGGCGCAAATAACAACAACACCCAGATGAT...GCTTCTGAAAGAGGGCTGTGCCTTCCGTTTCAGAAGGAGACATTTTGCTGTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR CAA 90 bp AGCAAAATGTCTCCTTCTGAAACGGAAGGCACAGCCCTCTTTCAGAAGCAAAACAGTCGGGGTTGGTATTaGTGTAAGGATTGTAAGACT +
Preference number: 5 (lower is better)
Translates to: SKMSPSETEGTALFQKQNSRGWY*CKDCKT
Trigger: AGTCTTACAATCCTTACACAAATACCAACCCCGACT...GTTTTGCTTCTGAAAGAGGGCTGTGCCTTCCGTTTCAGAAGGAGACATTTTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR CAA 90 bp GCAGAATGTAACAGCAAAATGTCTCCTTCTGAAACGGAAGGCACAGCCCTCTTTAGTCGGGGTTGGTATTaGTGTAAGGATTGTAAGACT +
Preference number: 5 (lower is better)
Translates to: AECNSKMSPSETEGTALFSRGWY*CKDCKT
Trigger: AGTCTTACAATCCTTACACAAATACCAACCCCGACT...AAAGAGGGCTGTGCCTTCCGTTTCAGAAGGAGACATTTTGCTGTTACATTCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR CAA 90 bp GGAAGGCACAGCCCTCTTTCAGAAGCAAAACACCTTAACACTCGGCTTCTATTTAGTAATATCGGTGTTTaGGTAGGCAGTCACTGCAAT +
Preference number: 5 (lower is better)
Translates to: GRHSPLSEAKHLNTRLLFSNIGV*VGSHCN
Trigger: ATTGCAGTGACTGCCTACCAAAACACCGATATTACT...AAATAGAAGCCGAGTGTTAAGGTGTTTTGCTTCTGAAAGAGGGCTGTGCCTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR CAA 90 bp CAAAACAGGATGCATCAAGGTGGAAGGCAAACATCTTTTTGGCAACCTAGGCAATTGGAATCTAGAGATTaGATGGAAGGGGGTGTCTCT +
Preference number: 5 (lower is better)
Translates to: QNRMHQGGRQTSFWQPRQLESRD*MEGGVS
Trigger: AGAGACACCCCCTTCCATCAAATCTCTAGATTCCAA...TTGCCTAGGTTGCCAAAAAGATGTTTGCCTTCCACCTTGATGCATCCTGTTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR CAA 90 bp CTTTACAAAGCCAAAGCACCAGTTTTACATTATCCCAGACACCTATGTAGACTAGATGAAACTCTCCCCTaGCCCCTGCAGCTGTTAAGT +
Preference number: 5 (lower is better)
Translates to: LYKAKAPVLHYPRHLCRLDETLP*PLQLLS
Trigger: ACTTAACAGCTGCAGGGGCAAGGGGAGAGTTTCATC...TAGTCTACATAGGTGTCTGGGATAATGTAAAACTGGTGCTTTGGCTTTGTAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
CDS-3UTR CAA 90 bp ATCAAGGTGGAAGGCAAACATCTTTTTGGCAACCTAGGCAAAGAAGACAACAAAATGTTATTGTCGGCTTaGCCACAGGTCACCCATTTG +
Preference number: 5 (lower is better)
Translates to: IKVEGKHLFGNLGKEDNKMLLSA*PQVTHL
Trigger: CAAATGGGTGACCTGTGGCAAAGCCGACAATAACAT...TTTGTTGTCTTCTTTGCCTAGGTTGCCAAAAAGATGTTTGCCTTCCACCTTGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR CAA 90 bp ACTCTCCCCTTGCCCCTGCAGCTGTTAAGTGATTTGCAAATTCTTTACAAAGCCATCATCTGGGTGTTGTaGTTATTTGCGCCTTTGTTA +
Preference number: 5 (lower is better)
Translates to: TLPLPLQLLSDLQILYKAIIWVL*LFAPLL
Trigger: TAACAAAGGCGCAAATAACAACAACACCCAGATGAT...GGCTTTGTAAAGAATTTGCAAATCACTTAACAGCTGCAGGGGCAAGGGGAGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
CDS-3UTR CAA 90 bp CTTTGGCACCTTCTTTTAGAGAATTGCACAAAACAGGATGCATCAAGGTGGAAGACCCTCCCATGCCTTTaGAGGTGTCTTTACTATACT +
Preference number: 5 (lower is better)
Translates to: LWHLLLENCTKQDASRWKTLPCL*RCLYYT
Trigger: AGTATAGTAAAGACACCTCAAAAGGCATGGGAGGGT...CTTCCACCTTGATGCATCCTGTTTTGTGCAATTCTCTAAAAGAAGGTGCCAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR CAA 90 bp GATTTGCAAATTCTTTACAAAGCCAAAGCACCAGTTTTACATTATCCCAGACACGATGAAACTCTCCCCTaGCCCCTGCAGCTGTTAAGT +
Preference number: 5 (lower is better)
Translates to: DLQILYKAKAPVLHYPRHDETLP*PLQLLS
Trigger: ACTTAACAGCTGCAGGGGCAAGGGGAGAGTTTCATC...GTGTCTGGGATAATGTAAAACTGGTGCTTTGGCTTTGTAAAGAATTTGCAAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
CDS TCA 90 bp TACAAGCACTGGTGTATACTCCTGAATCATTGGAATCTAGAGATTTaGTGGAAGGGGGTGTCTCTATCCAAGAAGAGCCAATTTCCTCTT +
Preference number: 5 (lower is better)
Translates to: YKHWCILLNHWNLEI*WKGVSLSKKSQFPL
Trigger: AAGAGGAAATTGGCTCTTCTTGGATAGAGACACCCCCTTCCATCAAATCTCTAGATTCCAATGATTCAGGAGTATACACCAGTGCTTGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS TCA 90 bp TTTACTATACTCTTCAGCATTAATGTCCTCACACTTTATGGAGGGTaGATTTTCATTACTGGAGTTGCTAGGAGACAGCCGCCTTCGCTT +
Preference number: 5 (lower is better)
Translates to: FTILFSINVLTLYGG*IFITGVARRQPPSL
Trigger: AAGCGAAGGCGGCTGTCTCCTAGCAACTCCAGTAATGAAAATTCACCCTCCATAAAGTGTGAGGACATTAATGCTGAAGAGTATAGTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR CAA 90 bp GATTTGCAAATTCTTTACAAAGCCAAAGCACCAGTTTTACATTATCCCAGACACCTGCCGGAAAACTTCTaGGACGCTTTGTCTAAGTCC +
Preference number: 5 (lower is better)
Translates to: DLQILYKAKAPVLHYPRHLPENF*DALSKS
Trigger: GGACTTAGACAAAGCGTCCAAGAAGTTTTCCGGCAG...GTGTCTGGGATAATGTAAAACTGGTGCTTTGGCTTTGTAAAGAATTTGCAAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
CDS-3UTR CAA 90 bp CTTTGGCACCTTCTTTTAGAGAATTGCACAAAACAGGATGCATCAAGGTGGAAGAGTAATATCGGTGTTTaGGTAGGCAGTCACTGCAAT +
Preference number: 5 (lower is better)
Translates to: LWHLLLENCTKQDASRWKSNIGV*VGSHCN
Trigger: ATTGCAGTGACTGCCTACCAAAACACCGATATTACT...CTTCCACCTTGATGCATCCTGTTTTGTGCAATTCTCTAAAAGAAGGTGCCAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR CAA 90 bp GGAAGGCACAGCCCTCTTTCAGAAGCAAAACACCTTAACACTCGGCTTCTATTTTTAAAAATGCTAGGTTaGTTTCAGTTACCTGCAGCA +
Preference number: 5 (lower is better)
Translates to: GRHSPLSEAKHLNTRLLFLKMLG*FQLPAA
Trigger: TGCTGCAGGTAACTGAAACAAACCTAGCATTTTTAA...AAATAGAAGCCGAGTGTTAAGGTGTTTTGCTTCTGAAAGAGGGCTGTGCCTTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR CAA 90 bp CTTTGGCACCTTCTTTTAGAGAATTGCACAAAACAGGATGCATCAAGGTGGAAGTTTGCGCCTTTGTTATaGGTGAGTTTTAATTTCCCG +
Preference number: 5 (lower is better)
Translates to: LWHLLLENCTKQDASRWKFAPLL*VSFNFP
Trigger: CGGGAAATTAAAACTCACCAATAACAAAGGCGCAAA...CTTCCACCTTGATGCATCCTGTTTTGTGCAATTCTCTAAAAGAAGGTGCCAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR CAA 90 bp CTTTACAAAGCCAAAGCACCAGTTTTACATTATCCCAGACACCTATGTAGACTAACCCTCCCATGCCTTTaGAGGTGTCTTTACTATACT +
Preference number: 5 (lower is better)
Translates to: LYKAKAPVLHYPRHLCRLTLPCL*RCLYYT
Trigger: AGTATAGTAAAGACACCTCAAAAGGCATGGGAGGGT...TAGTCTACATAGGTGTCTGGGATAATGTAAAACTGGTGCTTTGGCTTTGTAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
CDS-3UTR CAA 90 bp ATAGAAATGAGAATCAAAGGTTTTAACTCATCTGATAGCACTGGGCACCCAATGTCACAAAAGCTTTTCTaGACTCCTGGGCCTAGTATC +
Preference number: 5 (lower is better)
Translates to: IEMRIKGFNSSDSTGHPMSQKLF*TPGPSI
Trigger: GATACTAGGCCCAGGAGTCAAGAAAAGCTTTTGTGA...CATTGGGTGCCCAGTGCTATCAGATGAGTTAAAACCTTTGATTCTCATTTCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR CAA 90 bp CAAAACAGGATGCATCAAGGTGGAAGGCAAACATCTTTTTGGCAACCTAGGCAACAGCTGTTAAGTGATTaGCAAATTCTTTACAAAGCC +
Preference number: 5 (lower is better)
Translates to: QNRMHQGGRQTSFWQPRQQLLSD*QILYKA
Trigger: GGCTTTGTAAAGAATTTGCAAATCACTTAACAGCTG...TTGCCTAGGTTGCCAAAAAGATGTTTGCCTTCCACCTTGATGCATCCTGTTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
CDS-3UTR CAA 90 bp CAAATTCTTTACAAAGCCAAAGCACCAGTTTTACATTATCCCAGACACCTATGTTTGGAATCTAGAGATTaGATGGAAGGGGGTGTCTCT +
Preference number: 5 (lower is better)
Translates to: QILYKAKAPVLHYPRHLCLESRD*MEGGVS
Trigger: AGAGACACCCCCTTCCATCAAATCTCTAGATTCCAA...ACATAGGTGTCTGGGATAATGTAAAACTGGTGCTTTGGCTTTGTAAAGAATTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
CDS TCA 90 bp TCTTTAGGGAGTTGTGTAAAAAGCATAATACCCTCCCATGCCTTTTaGGGTGTCTTTACTATACTCTTCAGCATTAATGTCCTCACACTT +
Preference number: 5 (lower is better)
Translates to: SLGSCVKSIIPSHAF*GVFTILFSINVLTL
Trigger: AAGTGTGAGGACATTAATGCTGAAGAGTATAGTAAAGACACCTCAAAAGGCATGGGAGGGTATTATGCTTTTTACACAACTCCCTAAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR CAA 90 bp CAAATTCTTTACAAAGCCAAAGCACCAGTTTTACATTATCCCAGACACCTATGTACTATCATCTGGGTGTaGTTGTTATTTGCGCCTTTG +
Preference number: 5 (lower is better)
Translates to: QILYKAKAPVLHYPRHLCTIIWV*LLFAPL
Trigger: CAAAGGCGCAAATAACAACAACACCCAGATGATAGT...ACATAGGTGTCTGGGATAATGTAAAACTGGTGCTTTGGCTTTGTAAAGAATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
CDS-3UTR CAA 90 bp CAAATTCTTTACAAAGCCAAAGCACCAGTTTTACATTATCCCAGACACCTATGTAGTCGGGGTTGGTATTaGTGTAAGGATTGTAAGACT +
Preference number: 5 (lower is better)
Translates to: QILYKAKAPVLHYPRHLCSRGWY*CKDCKT
Trigger: AGTCTTACAATCCTTACACAAATACCAACCCCGACT...ACATAGGTGTCTGGGATAATGTAAAACTGGTGCTTTGGCTTTGTAAAGAATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
CDS-3UTR CAA 90 bp ATCAAGGTGGAAGGCAAACATCTTTTTGGCAACCTAGGCAAAGAAGACAACAAATTAAAAATGCTAGGTTaGTTTCAGTTACCTGCAGCA +
Preference number: 5 (lower is better)
Translates to: IKVEGKHLFGNLGKEDNKLKMLG*FQLPAA
Trigger: TGCTGCAGGTAACTGAAACAAACCTAGCATTTTTAA...TTTGTTGTCTTCTTTGCCTAGGTTGCCAAAAAGATGTTTGCCTTCCACCTTGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS-3UTR CAA 90 bp GATTTGCAAATTCTTTACAAAGCCAAAGCACCAGTTTTACATTATCCCAGACACATCATCTGGGTGTTGTaGTTATTTGCGCCTTTGTTA +
Preference number: 5 (lower is better)
Translates to: DLQILYKAKAPVLHYPRHIIWVL*LFAPLL
Trigger: TAACAAAGGCGCAAATAACAACAACACCCAGATGAT...GTGTCTGGGATAATGTAAAACTGGTGCTTTGGCTTTGTAAAGAATTTGCAAATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
CDS GCA 72 bp CCCGCGCCACTGCCCGCACCGGCTCCTGGGCCGAACTaGGCCCTCCCGGGTGGGCACACAGCCGCGGGGAAG +
Preference number: 6 (lower is better)
Translates to: PAPLPAPAPGPN*ALPGGHTAAGK
Trigger: CTTCCCCGCGGCTGTGTGCCCACCCGGGAGGGCGCAGTTCGGCCCAGGAGCCGGTGCGGGCAGTGGCGCGGG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
CDS CCA 72 bp GCTCGGAGCTCAGGCTGTCCATGGAGTAGCGCGCAGTaGCCGCAGCCGCGGCGGCGGCGGCGGCGGCGGCTG +
Preference number: 6 (lower is better)
Translates to: ARSSGCPWSSAQ*PQPRRRRRRRL
Trigger: CAGCCGCCGCCGCCGCCGCCGCCGCGGCTGCGGCCACTGCGCGCTACTCCATGGACAGCCTGAGCTCCGAGC
79% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
CDS CCA 72 bp GCTGCTACCGCCCGCGCCACTGCCCGCACCGGCTCCTaGGCCGAACTGCGCCCTCCCGGGTGGGCACACAGC +
Preference number: 6 (lower is better)
Translates to: AATARATARTGS*AELRPPGWAHS
Trigger: GCTGTGTGCCCACCCGGGAGGGCGCAGTTCGGCCCAGGAGCCGGTGCGGGCAGTGGCGCGGGCGGTAGCAGC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
CDS CCA 72 bp GGGTACACAGGTCCGTGGGGCGCCCCAGCCGCCGCCTaGTACGGGAAGAGTGAGCAGGGCGCAGCCAGCTCC +
Preference number: 6 (lower is better)
Translates to: GYTGPWGAPAAA*YGKSEQGAASS
Trigger: GGAGCTGGCTGCGCCCTGCTCACTCTTCCCGTACCAGGCGGCGGCTGGGGCGCCCCACGGACCTGTGTACCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
CDS GCA 72 bp GGGCCCCGGCTTGGCCACTGCCGCAGCGCTGGCAAATaGGTCCCCGGCGTCGGTGTCACTAAGCATGGCCGC +
Preference number: 6 (lower is better)
Translates to: GPRLGHCRSAGK*VPGVGVTKHGR
Trigger: GCGGCCATGCTTAGTGACACCGACGCCGGGGACGCATTTGCCAGCGCTGCGGCAGTGGCCAAGCCGGGGCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
CDS GCA 72 bp CCGGGGCTACCCACCTGCCGACTCGCGGGCCGCTACTaGGCGTACTGGCGCGCCCTGAATCCAGCGTCCTTT +
Preference number: 6 (lower is better)
Translates to: PGLPTCRLAGRY*AYWRALNPASF
Trigger: AAAGGACGCTGGATTCAGGGCGCGCCAGTACGCGCAGTAGCGGCCCGCGAGTCGGCAGGTGGGTAGCCCCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295743.8
CDS CCA 72 bp CCCACCTGCCGACTCGCGGGCCGCTACTGCGCGTACTaGCGCGCCCTGAATCCAGCGTCCTTTCCGGAAGGA +
Preference number: 6 (lower is better)
Translates to: PTCRLAGRYCAY*RALNPASFPEG
Trigger: TCCTTCCGGAAAGGACGCTGGATTCAGGGCGCGCCAGTACGCGCAGTAGCGGCCCGCGAGTCGGCAGGTGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295743.8
CDS CCA 72 bp TGCGCCTGCCGACTCGCGGGCCGCTACTGCGCGTACTaGCGCGCCCTGAATCCAGCGTCCTTTCCGGAAGGA +
Preference number: 6 (lower is better)
Translates to: CACRLAGRYCAY*RALNPASFPEG
Trigger: TCCTTCCGGAAAGGACGCTGGATTCAGGGCGCGCCAGTACGCGCAGTAGCGGCCCGCGAGTCGGCAGGCGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461503.2
CDS TCA 72 bp GACTCGCGGGCCGCTACTGCGCGTACTGGCGCGCCCTaGATCCAGCGTCCTTTCCGGAAGGAAAGCGCCGTG +
Preference number: 6 (lower is better)
Translates to: DSRAATARTGAP*IQRPFRKESAV
Trigger: CACGGCGCTTTCCTTCCGGAAAGGACGCTGGATTCAGGGCGCGCCAGTACGCGCAGTAGCGGCCCGCGAGTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461503.2
CDS GCA 72 bp AAGGAAACATGCGCCTGCCGACTCGCGGGCCGCTACTaGGCGTACTGGCGCGCCCTGAATCCAGCGTCCTTT +
Preference number: 6 (lower is better)
Translates to: KETCACRLAGRY*AYWRALNPASF
Trigger: AAAGGACGCTGGATTCAGGGCGCGCCAGTACGCGCAGTAGCGGCCCGCGAGTCGGCAGGCGCATGTTTCCTT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461503.2
CDS CAA 90 bp GTCCCAGGTTGCTGGACAGGCGTGACAAGCCACCGCTGGGGAGGGTaGGCCACCTCTTCGCTCTGTTGGGGTGAAAGGAGGCCGTTGGTC +
Preference number: 6 (lower is better)
Translates to: VPGCWTGVTSHRWGG*ATSSLCWGERRPLV
Trigger: GACCAACGGCCTCCTTTCACCCCAACAGAGCGAAGAGGTGGCCAACCCTCCCCAGCGGTGGCTTGTCACGCCTGTCCAGCAACCTGGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS CCA 72 bp CACCGCTGGGGAGGGTTGGCCACCTCTTCGCTCTGTTaGGGTGAAAGGAGGCCGTTGGTCTGTGGCACGGTT +
Preference number: 6 (lower is better)
Translates to: HRWGGLATSSLC*GERRPLVCGTV
Trigger: AACCGTGCCACAGACCAACGGCCTCCTTTCACCCCAACAGAGCGAAGAGGTGGCCAACCCTCCCCAGCGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS TCA 72 bp CTGGGGAGGGTTGGCCACCTCTTCGCTCTGTTGGGGTaGAAGGAGGCCGTTGGTCTGTGGCACGGTTCTCTC +
Preference number: 6 (lower is better)
Translates to: LGRVGHLFALLG*KEAVGLWHGSL
Trigger: GAGAGAACCGTGCCACAGACCAACGGCCTCCTTTCACCCCAACAGAGCGAAGAGGTGGCCAACCCTCCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS CCA 72 bp AGCGCAGACGGCAGCTGGCTGCTTCCTCTCCTCCGGTaGCCTTATTATAAAGGCAGGATGGGGGAGCCAGCG +
Preference number: 6 (lower is better)
Translates to: SADGSWLLPLLR*PYYKGRMGEPA
Trigger: CGCTGGCTCCCCCATCCTGCCTTTATAATAAGGCCACCGGAGGAGAGGAAGCAGCCAGCTGCCGTCTGCGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295743.8
CDS GCA 72 bp CTGCGGGCTCCCCGCTCACCGCCTCGCAGGAGAGACTaGCGGAAAACTTCTTGGACGCTTTGTCTAAGTCCA +
Preference number: 6 (lower is better)
Translates to: LRAPRSPPRRRD*RKTSWTLCLSP
Trigger: TGGACTTAGACAAAGCGTCCAAGAAGTTTTCCGGCAGTCTCTCCTGCGAGGCGGTGAGCGGGGAGCCCGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
CDS GCA 72 bp CCTCTGGTAAGAACCTCGACCTCCCCACCCTGCCATTaGAGGAAAGGTTGGGTCTGGGTAATACCCCAGGGC +
Preference number: 6 (lower is better)
Translates to: PLVRTSTSPPCH*RKGWVWVIPQG
Trigger: GCCCTGGGGTATTACCCAGACCCAACCTTTCCTGCAATGGCAGGGTGGGGAGGTCGAGGTTCTTACCAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS CCA 72 bp ACCTCCCCACCCTGCCATTGCAGGAAAGGTTGGGTCTaGGTAATACCCCAGGGCATGGGATGTCTGAAGGGG +
Preference number: 6 (lower is better)
Translates to: TSPPCHCRKGWV*VIPQGMGCLKG
Trigger: CCCCTTCAGACATCCCATGCCCTGGGGTATTACCCAGACCCAACCTTTCCTGCAATGGCAGGGTGGGGAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS CAA 90 bp CTGCCATCTTCCTCTGGTAAGAACCTCGACCTCCCCACCCTGCCATaGCAGGAAAGGTTGGGTCTGGGTAATACCCCAGGGCATGGGATG +
Preference number: 6 (lower is better)
Translates to: LPSSSGKNLDLPTLP*QERLGLGNTPGHGM
Trigger: CATCCCATGCCCTGGGGTATTACCCAGACCCAACCTTTCCTGCAATGGCAGGGTGGGGAGGTCGAGGTTCTTACCAGAGGAAGATGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS GCA 72 bp AGGTTCACTGAGCTCACCAAGAGCTGCTCCCCTAACTaGATGCTTTGCAAAGCGCAGACGGCAGCTGGCTGC +
Preference number: 6 (lower is better)
Translates to: RFTELTKSCSPN*MLCKAQTAAGC
Trigger: GCAGCCAGCTGCCGTCTGCGCTTTGCAAAGCATGCAGTTAGGGGAGCAGCTCTTGGTGAGCTCAGTGAACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295743.8
CDS CAA 72 bp TCCTCTGGTAAGAACCTCGACCTCCCCACCCTGCCATaGCAGGAAAGGTTGGGTCTGGGTAATACCCCAGGG +
Preference number: 6 (lower is better)
Translates to: SSGKNLDLPTLP*QERLGLGNTPG
Trigger: CCCTGGGGTATTACCCAGACCCAACCTTTCCTGCAATGGCAGGGTGGGGAGGTCGAGGTTCTTACCAGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS CAA 90 bp CGCGCCCTGAATCCAGCGTCCTTTCCGGAAGGAAAGCGCCGTGAGTaGGAAAGCAGGAGGTGGAAACTAACCCAGAAGCCCTCTCCTTTT +
Preference number: 6 (lower is better)
Translates to: RALNPASFPEGKRRE*ESRRWKLTQKPSPF
Trigger: AAAAGGAGAGGGCTTCTGGGTTAGTTTCCACCTCCTGCTTTCCAACTCACGGCGCTTTCCTTCCGGAAAGGACGCTGGATTCAGGGCGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461503.2
CDS GCA 72 bp CATCTTCCTCTGGTAAGAACCTCGACCTCCCCACCCTaGCATTGCAGGAAAGGTTGGGTCTGGGTAATACCC +
Preference number: 6 (lower is better)
Translates to: HLPLVRTSTSPP*HCRKGWVWVIP
Trigger: GGGTATTACCCAGACCCAACCTTTCCTGCAATGGCAGGGTGGGGAGGTCGAGGTTCTTACCAGAGGAAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS CCA 72 bp CCACCTCTTCGCTCTGTTGGGGTGAAAGGAGGCCGTTaGTCTGTGGCACGGTTCTCTCGCCATTATAATAGC +
Preference number: 6 (lower is better)
Translates to: PPLRSVGVKGGR*SVARFSRHYNS
Trigger: GCTATTATAATGGCGAGAGAACCGTGCCACAGACCAACGGCCTCCTTTCACCCCAACAGAGCGAAGAGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS CCA 72 bp CCGGAAGGAAAGCGCCGTGAGTTGGAAAGCAGGAGGTaGAAACTAACCCAGAAGCCCTCTCCTTTTCCTTCC +
Preference number: 6 (lower is better)
Translates to: PEGKRRELESRR*KLTQKPSPFPS
Trigger: GGAAGGAAAAGGAGAGGGCTTCTGGGTTAGTTTCCACCTCCTGCTTTCCAACTCACGGCGCTTTCCTTCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461503.2
CDS CAA 72 bp AATCCAGCGTCCTTTCCGGAAGGAAAGCGCCGTGAGTaGGAAAGCAGGAGGTGGAAACTAACCCAGAAGCCC +
Preference number: 6 (lower is better)
Translates to: NPASFPEGKRRE*ESRRWKLTQKP
Trigger: GGGCTTCTGGGTTAGTTTCCACCTCCTGCTTTCCAACTCACGGCGCTTTCCTTCCGGAAAGGACGCTGGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461503.2
CDS TCA 72 bp CCTGAATCCAGCGTCCTTTCCGGAAGGAAAGCGCCGTaGGTTGGAAAGCAGGAGGTGGAAACTAACCCAGAA +
Preference number: 6 (lower is better)
Translates to: PESSVLSGRKAP*VGKQEVETNPE
Trigger: TTCTGGGTTAGTTTCCACCTCCTGCTTTCCAACTCACGGCGCTTTCCTTCCGGAAAGGACGCTGGATTCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461503.2
CDS GCA 72 bp AACTGCATGCTTTGCAAAGCGCAGACGGCAGCTGGCTaGTTCCTCTCCTCCGGTGGCCTTATTATAAAGGCA +
Preference number: 6 (lower is better)
Translates to: NCMLCKAQTAAG*FLSSGGLIIKA
Trigger: TGCCTTTATAATAAGGCCACCGGAGGAGAGGAAGCAGCCAGCTGCCGTCTGCGCTTTGCAAAGCATGCAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295743.8
CDS CCA 72 bp TCACCGCCTCGCAGGAGAGACTGCCGGAAAACTTCTTaGACGCTTTGTCTAAGTCCAACTTCTGAGGAGAGG +
Preference number: 6 (lower is better)
Translates to: SPPRRRDCRKTS*TLCLSPTSEER
Trigger: CCTCTCCTCAGAAGTTGGACTTAGACAAAGCGTCCAAGAAGTTTTCCGGCAGTCTCTCCTGCGAGGCGGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295743.8
ENST00000449599.4
CDS CAA 72 bp CCTTGGAGAGCTGATCTTCAGAGAACACAGTGGGGCTaGTTCTGGAGGTCCATGGTAGTCCAGCTGCCATCT +
Preference number: 6 (lower is better)
Translates to: PWRADLQRTQWG*FWRSMVVQLPS
Trigger: AGATGGCAGCTGGACTACCATGGACCTCCAGAACAAGCCCCACTGTGTTCTCTGAAGATCAGCTCTCCAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS CCA 72 bp AGAGCTGATCTTCAGAGAACACAGTGGGGCTTGTTCTaGAGGTCCATGGTAGTCCAGCTGCCATCTTCCTCT +
Preference number: 6 (lower is better)
Translates to: RADLQRTQWGLF*RSMVVQLPSSS
Trigger: AGAGGAAGATGGCAGCTGGACTACCATGGACCTCCAGAACAAGCCCCACTGTGTTCTCTGAAGATCAGCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS CAA 90 bp TCACTTTCTCCTTGGAGAGCTGATCTTCAGAGAACACAGTGGGGCTaGTTCTGGAGGTCCATGGTAGTCCAGCTGCCATCTTCCTCTGGT +
Preference number: 6 (lower is better)
Translates to: SLSPWRADLQRTQWG*FWRSMVVQLPSSSG
Trigger: ACCAGAGGAAGATGGCAGCTGGACTACCATGGACCTCCAGAACAAGCCCCACTGTGTTCTCTGAAGATCAGCTCTCCAAGGAGAAAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS TCA 72 bp TCTCGCCATTATAATAGCGGGCTTGAGGTAAAGTGTTaGCAAAGGGCTCCGGGAAGAAGGATTGAACGCCGT +
Preference number: 6 (lower is better)
Translates to: SRHYNSGLEVKC*QRAPGRRIERR
Trigger: ACGGCGTTCAATCCTTCTTCCCGGAGCCCTTTGTCAACACTTTACCTCAAGCCCGCTATTATAATGGCGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS CAA 90 bp GACAGCCGCCTTCGCTTACAAGCACTGGTGTATACTCCTGAATCATaGGAATCTAGAGATTTGATGGAAGGGGGTGTCTCTATCCAAGAA +
Preference number: 6 (lower is better)
Translates to: DSRLRLQALVYTPES*ESRDLMEGGVSIQE
Trigger: TTCTTGGATAGAGACACCCCCTTCCATCAAATCTCTAGATTCCAATGATTCAGGAGTATACACCAGTGCTTGTAAGCGAAGGCGGCTGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS TCA 72 bp CTCTTCAGCATTAATGTCCTCACACTTTATGGAGGGTaGATTTTCATTACTGGAGTTGCTAGGAGACAGCCG +
Preference number: 6 (lower is better)
Translates to: LFSINVLTLYGG*IFITGVARRQP
Trigger: CGGCTGTCTCCTAGCAACTCCAGTAATGAAAATTCACCCTCCATAAAGTGTGAGGACATTAATGCTGAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS GCA 72 bp AAGTCCTCCACGCCATCCTCTGTAACTTCAACAATATaGAGTCGGGGTTGGTATTTGTGTAAGGATTGTAAG +
Preference number: 6 (lower is better)
Translates to: KSSTPSSVTSTI*SRGWYLCKDCK
Trigger: CTTACAATCCTTACACAAATACCAACCCCGACTGCATATTGTTGAAGTTACAGAGGATGGCGTGGAGGACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS CAA 72 bp CTGGTGTATACTCCTGAATCATTGGAATCTAGAGATTaGATGGAAGGGGGTGTCTCTATCCAAGAAGAGCCA +
Preference number: 6 (lower is better)
Translates to: LVYTPESLESRD*MEGGVSIQEEP
Trigger: TGGCTCTTCTTGGATAGAGACACCCCCTTCCATCAAATCTCTAGATTCCAATGATTCAGGAGTATACACCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS CAA 72 bp CTTCGCTTACAAGCACTGGTGTATACTCCTGAATCATaGGAATCTAGAGATTTGATGGAAGGGGGTGTCTCT +
Preference number: 6 (lower is better)
Translates to: LRLQALVYTPES*ESRDLMEGGVS
Trigger: AGAGACACCCCCTTCCATCAAATCTCTAGATTCCAATGATTCAGGAGTATACACCAGTGCTTGTAAGCGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS CAA 90 bp TTACAAGCACTGGTGTATACTCCTGAATCATTGGAATCTAGAGATTaGATGGAAGGGGGTGTCTCTATCCAAGAAGAGCCAATTTCCTCT +
Preference number: 6 (lower is better)
Translates to: LQALVYTPESLESRD*MEGGVSIQEEPISS
Trigger: AGAGGAAATTGGCTCTTCTTGGATAGAGACACCCCCTTCCATCAAATCTCTAGATTCCAATGATTCAGGAGTATACACCAGTGCTTGTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS CCA 72 bp CCATCCTCTGTAACTTCAACAATATGCAGTCGGGGTTaGTATTTGTGTAAGGATTGTAAGACTATCATCTGG +
Preference number: 6 (lower is better)
Translates to: PSSVTSTICSRG*YLCKDCKTIIW
Trigger: CCAGATGATAGTCTTACAATCCTTACACAAATACCAACCCCGACTGCATATTGTTGAAGTTACAGAGGATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS CAA 90 bp ACGCCATCCTCTGTAACTTCAACAATATGCAGTCGGGGTTGGTATTaGTGTAAGGATTGTAAGACTATCATCTGGGTGTTGTTGTTATTT +
Preference number: 6 (lower is better)
Translates to: TPSSVTSTICSRGWY*CKDCKTIIWVLLLF
Trigger: AAATAACAACAACACCCAGATGATAGTCTTACAATCCTTACACAAATACCAACCCCGACTGCATATTGTTGAAGTTACAGAGGATGGCGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS CCA 72 bp ATGGGATGTCTGAAGGGGCAAGGATTTAATGCCATATaGGAGCAATGTGCTAGAAGTATATTCAGATTCATA +
Preference number: 6 (lower is better)
Translates to: MGCLKGQGFNAI*EQCARSIFRFI
Trigger: TATGAATCTGAATATACTTCTAGCACATTGCTCCCATATGGCATTAAATCCTTGCCCCTTCAGACATCCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS CAA 72 bp TCTGTAACTTCAACAATATGCAGTCGGGGTTGGTATTaGTGTAAGGATTGTAAGACTATCATCTGGGTGTTG +
Preference number: 6 (lower is better)
Translates to: SVTSTICSRGWY*CKDCKTIIWVL
Trigger: CAACACCCAGATGATAGTCTTACAATCCTTACACAAATACCAACCCCGACTGCATATTGTTGAAGTTACAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS GCA 72 bp TTTAGGGAGTTGTGTAAAAAGCATAATACCCTCCCATaGCTTTTGAGGTGTCTTTACTATACTCTTCAGCAT +
Preference number: 6 (lower is better)
Translates to: FRELCKKHNTLP*LLRCLYYTLQH
Trigger: ATGCTGAAGAGTATAGTAAAGACACCTCAAAAGGCATGGGAGGGTATTATGCTTTTTACACAACTCCCTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2
CDS TCA 72 bp AGTTGTGTAAAAAGCATAATACCCTCCCATGCCTTTTaGGGTGTCTTTACTATACTCTTCAGCATTAATGTC +
Preference number: 6 (lower is better)
Translates to: SCVKSIIPSHAF*GVFTILFSINV
Trigger: GACATTAATGCTGAAGAGTATAGTAAAGACACCTCAAAAGGCATGGGAGGGTATTATGCTTTTTACACAACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295743.8
ENST00000449599.4
ENST00000461503.2