RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EOGT (Homo sapiens)

Ensembl gene IDs: ENSG00000163378

Ensembl transcript IDs: ENST00000295571.9, ENST00000383701.8, ENST00000403140.6, ENST00000424374.5, ENST00000456376.2, ENST00000480846.1, ENST00000496647.5, ENST00000540764.5, ENST00000540955.5, ENST00000615922.1

Found 313 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGTGGCCCTTATCCTGAGGAAAGACTTTGTTCTGCCGTCGCCAAGTaGTGTAGTGAACGCCTCTCAGCCTGGCCAAGTCTAAGTAACAGC +
Preference number: 1 (lower is better)
Translates to: GGPYPEERLCSAVAK*CSERLSAWPSLSNS
Trigger: GCTGTTACTTAGACTTGGCCAGGCTGAGAGGCGTTCACTACATCACTTGGCGACGGCAGAACAAAGTCTTTCCTCAGGATAAGGGCCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403140.6
3UTR GCA 90 bp CAACTCTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTTTTaGATGTTTTCCTTTCCTACCACAAACAGTGTTATAACCAGATTA +
Preference number: 1 (lower is better)
Translates to: QLCVCVCVCVCVCMF*MFSFPTTNSVITRL
Trigger: TAATCTGGTTATAACACTGTTTGTGGTAGGAAAGGAAAACATGCAAAACATACACACACACACACACACACACACACACACGCAGAGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295571.9
ENST00000383701.8
3UTR TCA 90 bp TTTATTCAGGTTCTCGATGCATATAACCTGGAGGTGACTAAACGCTaGTCTATAACATGGTCCTATAGCTTGGTACTGAGAATCACAACT +
Preference number: 1 (lower is better)
Translates to: FIQVLDAYNLEVTKR*SITWSYSLVLRITT
Trigger: AGTTGTGATTCTCAGTACCAAGCTATAGGACCATGTTATAGATCAGCGTTTAGTCACCTCCAGGTTATATGCATCGAGAACCTGAATAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000615922.1
3UTR GCA 90 bp ATGTTTCTTCTTAAATGGCCACTTTGGGTGTTGCAATACGTGGTCTaGAGCCTGAAGGACAAGATACATAAATTCTTCTACATCGAAAGA +
Preference number: 1 (lower is better)
Translates to: MFLLKWPLWVLQYVV*SLKDKIHKFFYIER
Trigger: TCTTTCGATGTAGAAGAATTTATGTATCTTGTCCTTCAGGCTGCAGACCACGTATTGCAACACCCAAAGTGGCCATTTAAGAAGAAACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403140.6
3UTR-3UTR CCA 90 bp CGCTTGAACCTGGGGAGGCAGAAGTTGCATAAACTGAGATCATGCCACTGCACTAAAATCAACTGGGCGTaGTGGTGCACGCCTGTAATC +
Preference number: 2 (lower is better)
Translates to: RLNLGRQKLHKLRSCHCTKINWA*WCTPVI
Trigger: GATTACAGGCGTGCACCACCACGCCCAGTTGATTTT...AGTGCAGTGGCATGATCTCAGTTTATGCAACTTCTGCCTCCCCAGGTTCAAGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295571.9
ENST00000383701.8
3UTR-3UTR TCA 90 bp GGTGTGGTGGTGCAGGCTGCAATCCCAGCTAGTCAGGTGGCTGAGGCAAAAGAAAATAGTCCAGTATTTTaGCAGCCAGATATCAGAGGA +
Preference number: 2 (lower is better)
Translates to: GVVVQAAIPASQVAEAKENSPVF*QPDIRG
Trigger: TCCTCTGATATCTGGCTGTCAAAATACTGGACTATT...TTCTTTTGCCTCAGCCACCTGACTAGCTGGGATTGCAGCCTGCACCACCACACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000403140.6
3UTR-3UTR TCA 90 bp ATGTTTCTTCTTAAATGGCCACTTTGGGTGTTGCAATACGTGGTCTGCAGCCTGCGAAAGAGTAGTTGGTaGACTTCGGGTGCTCCCCCA +
Preference number: 2 (lower is better)
Translates to: MFLLKWPLWVLQYVVCSLRKSSW*TSGAPP
Trigger: TGGGGGAGCACCCGAAGTTCACCAACTACTCTTTCG...CAGGCTGCAGACCACGTATTGCAACACCCAAAGTGGCCATTTAAGAAGAAACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403140.6
3UTR-3UTR TCA 90 bp CGCTTGAACCTGGGGAGGCAGAAGTTGCATAAACTGAGATCATGCCACTGCACTAGAAGTTGCATAAACTaGGATCATGCCACTGCACTC +
Preference number: 2 (lower is better)
Translates to: RLNLGRQKLHKLRSCHCTRSCIN*DHATAL
Trigger: GAGTGCAGTGGCATGATCTCAGTTTATGCAACTTCT...AGTGCAGTGGCATGATCTCAGTTTATGCAACTTCTGCCTCCCCAGGTTCAAGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000403140.6
3UTR-3UTR GCA 90 bp CTGACAGAGGTAGACGCACACGCACTGGTATATGCAGTTACAAATACTCGCATACCAGAAGGCAGAGGTTaGAGTGAGCTGAGATCATGC +
Preference number: 2 (lower is better)
Translates to: LTEVDAHALVYAVTNTRIPEGRG*SELRSC
Trigger: GCATGATCTCAGCTCACTGCAACCTCTGCCTTCTGG...TATGCGAGTATTTGTAACTGCATATACCAGTGCGTGTGCGTCTACCTCTGTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295571.9
ENST00000383701.8
3UTR-3UTR GCA 90 bp CGCTTGAACCTGGGGAGGCAGAAGTTGCATAAACTGAGATCATGCCACTGCACTAGTCTGTGTAGTACATaGTGGGCAAATGCCCTGAAT +
Preference number: 2 (lower is better)
Translates to: RLNLGRQKLHKLRSCHCTSLCST*WANALN
Trigger: ATTCAGGGCATTTGCCCAGCATGTACTACACAGACT...AGTGCAGTGGCATGATCTCAGTTTATGCAACTTCTGCCTCCCCAGGTTCAAGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403140.6
3UTR-3UTR TCA 90 bp CGCTTGAACCTGGGGAGGCAGAAGTTGCATAAACTGAGATCATGCCACTGCACTGAGGTGACTAAACGCTaGTCTATAACATGGTCCTAT +
Preference number: 2 (lower is better)
Translates to: RLNLGRQKLHKLRSCHCTEVTKR*SITWSY
Trigger: ATAGGACCATGTTATAGATCAGCGTTTAGTCACCTC...AGTGCAGTGGCATGATCTCAGTTTATGCAACTTCTGCCTCCCCAGGTTCAAGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295571.9
ENST00000383701.8
3UTR-3UTR TCA 90 bp TGTAGTGAACGCCTCTCAGCCTGGCCAAGTCTAAGTAACAGCGTTCATCTTCACTCCGTGCAAGAATGGTaGCTCGAATTTTTCCATCCT +
Preference number: 2 (lower is better)
Translates to: CSERLSAWPSLSNSVHLHSVQEW*LEFFHP
Trigger: AGGATGGAAAAATTCGAGTCACCATTCTTGCACGGA...GTGAAGATGAACGCTGTTACTTAGACTTGGCCAGGCTGAGAGGCGTTCACTACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403140.6
3UTR-3UTR TCA 90 bp GTGGAAACCAGACAGAAGGTATGCAAGACAGTCCTACAGAATGTTCTAATTTGCGGTGGGAGGATTTCTTaGACCCAGAGTTCGAGACCA +
Preference number: 2 (lower is better)
Translates to: VETRQKVCKTVLQNVLICGGRIS*TQSSRP
Trigger: TGGTCTCGAACTCTGGGTTCAAGAAATCCTCCCACC...GCAAATTAGAACATTCTGTAGGACTGTCTTGCATACCTTCTGTCTGGTTTCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295571.9
ENST00000383701.8
3UTR-3UTR GCA 90 bp GGTAGACGCACACGCACTGGTATATGCAGTTACAAATACTCGCATAAAATGGAACCAGAAGGCAGAGGTTaGAGTGAGCTGAGATCATGC +
Preference number: 2 (lower is better)
Translates to: GRRTRTGICSYKYSHKMEPEGRG*SELRSC
Trigger: GCATGATCTCAGCTCACTGCAACCTCTGCCTTCTGG...TTCCATTTTATGCGAGTATTTGTAACTGCATATACCAGTGCGTGTGCGTCTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295571.9
ENST00000383701.8
3UTR-3UTR TCA 90 bp GTGGAAACCAGACAGAAGGTATGCAAGACAGTCCTACAGAATGTTCTAATTTGCGCCTGGCCAACATGGTaGAACTCCGTCTCTATCAAA +
Preference number: 2 (lower is better)
Translates to: VETRQKVCKTVLQNVLICAWPTW*NSVSIK
Trigger: TTTGATAGAGACGGAGTTTCACCATGTTGGCCAGGC...GCAAATTAGAACATTCTGTAGGACTGTCTTGCATACCTTCTGTCTGGTTTCCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295571.9
ENST00000383701.8
3UTR-3UTR TCA 90 bp CACAAATGCTCTCCATGGCTAAGAAGGAATCAGTGGAAACCAGACAGAAGGTATAGAAGTTGCATAAACTaGGATCATGCCACTGCACTC +
Preference number: 2 (lower is better)
Translates to: HKCSPWLRRNQWKPDRRYRSCIN*DHATAL
Trigger: GAGTGCAGTGGCATGATCTCAGTTTATGCAACTTCT...ATACCTTCTGTCTGGTTTCCACTGATTCCTTCTTAGCCATGGAGAGCATTTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295571.9
ENST00000383701.8
3UTR-3UTR TCA 90 bp GTGGAAACCAGACAGAAGGTATGCAAGACAGTCCTACAGAATGTTCTAATTTGCCCTATAGCTTGGTACTaGGAATCACAACTCTGCGTG +
Preference number: 2 (lower is better)
Translates to: VETRQKVCKTVLQNVLICPIAWY*ESQLCV
Trigger: CACGCAGAGTTGTGATTCTCAGTACCAAGCTATAGG...GCAAATTAGAACATTCTGTAGGACTGTCTTGCATACCTTCTGTCTGGTTTCCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000615922.1
3UTR-3UTR TCA 90 bp CTGACAGAGGTAGACGCACACGCACTGGTATATGCAGTTACAAATACTCGCATAGAGGTGACTAAACGCTaGTCTATAACATGGTCCTAT +
Preference number: 2 (lower is better)
Translates to: LTEVDAHALVYAVTNTRIEVTKR*SITWSY
Trigger: ATAGGACCATGTTATAGATCAGCGTTTAGTCACCTC...TATGCGAGTATTTGTAACTGCATATACCAGTGCGTGTGCGTCTACCTCTGTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000615922.1
3UTR-3UTR TCA 90 bp AAGCTCATTTTGGTTAAGGATTTTCCGGTATTCTGTGCTCCGTGCAAGAATGGTGCTGGGCAAATGCCCTaGATAGTCCAGTATTTTGAC +
Preference number: 2 (lower is better)
Translates to: KLILVKDFPVFCAPCKNGAGQMP*IVQYFD
Trigger: GTCAAAATACTGGACTATTCAGGGCATTTGCCCAGC...ACCATTCTTGCACGGAGCACAGAATACCGGAAAATCCTTAACCAAAATGAGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000403140.6
3UTR-3UTR GCA 90 bp ATGTTTCTTCTTAAATGGCCACTTTGGGTGTTGCAATACGTGGTCTGCAGCCTGGTCAGACCAGCTCCATaGATTCCAATAAATATGTCC +
Preference number: 2 (lower is better)
Translates to: MFLLKWPLWVLQYVVCSLVRPAP*IPINMS
Trigger: GGACATATTTATTGGAATGCATGGAGCTGGTCTGAC...CAGGCTGCAGACCACGTATTGCAACACCCAAAGTGGCCATTTAAGAAGAAACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403140.6
3UTR-3UTR CCA 90 bp GTGGAAACCAGACAGAAGGTATGCAAGACAGTCCTACAGAATGTTCTAATTTGCAATACAAAAATCAACTaGGCGTGGTGGTGCACGCCT +
Preference number: 2 (lower is better)
Translates to: VETRQKVCKTVLQNVLICNTKIN*AWWCTP
Trigger: AGGCGTGCACCACCACGCCCAGTTGATTTTTGTATT...GCAAATTAGAACATTCTGTAGGACTGTCTTGCATACCTTCTGTCTGGTTTCCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295571.9
ENST00000383701.8
3UTR-3UTR CCA 90 bp TATTCTGTGCTCCGTGCAAGAATGGTGACTCGAATTTTTCCATCCTTAGGTCCTCTGTGTAGTACATGCTaGGCAAATGCCCTGAATAGT +
Preference number: 2 (lower is better)
Translates to: YSVLRARMVTRIFPSLGPLCSTC*ANALNS
Trigger: ACTATTCAGGGCATTTGCCCAGCATGTACTACACAG...AGGACCTAAGGATGGAAAAATTCGAGTCACCATTCTTGCACGGAGCACAGAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403140.6
3UTR-3UTR TCA 90 bp GTGGTCTGCAGCCTGAAGGACAAGATACATAAATTCTTCTACATCGAAAGAGTAAGAAGTTGCATAAACTaGGATCATGCCACTGCACTC +
Preference number: 2 (lower is better)
Translates to: VVCSLKDKIHKFFYIERVRSCIN*DHATAL
Trigger: GAGTGCAGTGGCATGATCTCAGTTTATGCAACTTCT...TACTCTTTCGATGTAGAAGAATTTATGTATCTTGTCCTTCAGGCTGCAGACCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403140.6
3UTR-3UTR GCA 90 bp GGTAGACGCACACGCACTGGTATATGCAGTTACAAATACTCGCATAAAATGGAAACCAGACAGAAGGTATaGAAGACAGTCCTACAGAAT +
Preference number: 2 (lower is better)
Translates to: GRRTRTGICSYKYSHKMETRQKV*KTVLQN
Trigger: ATTCTGTAGGACTGTCTTGCATACCTTCTGTCTGGT...TTCCATTTTATGCGAGTATTTGTAACTGCATATACCAGTGCGTGTGCGTCTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000615922.1
3UTR-3UTR GCA 90 bp GTGGTCTGCAGCCTGAAGGACAAGATACATAAATTCTTCTACATCGAAAGAGTAGTATTCTGTGCTCCGTaGAAGAATGGTGACTCGAAT +
Preference number: 2 (lower is better)
Translates to: VVCSLKDKIHKFFYIERVVFCAP*KNGDSN
Trigger: ATTCGAGTCACCATTCTTGCACGGAGCACAGAATAC...TACTCTTTCGATGTAGAAGAATTTATGTATCTTGTCCTTCAGGCTGCAGACCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403140.6
3UTR-3UTR GCA 90 bp CTGACAGAGGTAGACGCACACGCACTGGTATATGCAGTTACAAATACTCGCATATTAATTAATCACAAATaGTCTCCATGGCTAAGAAGG +
Preference number: 2 (lower is better)
Translates to: LTEVDAHALVYAVTNTRILINHK*SPWLRR
Trigger: CCTTCTTAGCCATGGAGAGCATTTGTGATTAATTAA...TATGCGAGTATTTGTAACTGCATATACCAGTGCGTGTGCGTCTACCTCTGTCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000615922.1
3UTR-3UTR GCA 90 bp AAAAGTAAATGGGTCAGACCAGCTCCATGCATTCCAATAAATATGTCCGTGTTGGTCATAATCAGTAAATaGATTCCATGTGTCGGAGAA +
Preference number: 2 (lower is better)
Translates to: KSKWVRPAPCIPINMSVLVIISK*IPCVGE
Trigger: TTCTCCGACACATGGAATGCATTTACTGATTATGAC...CAACACGGACATATTTATTGGAATGCATGGAGCTGGTCTGACCCATTTACTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403140.6
3UTR-3UTR CAA 90 bp GGTGTGGTGGTGCAGGCTGCAATCCCAGCTAGTCAGGTGGCTGAGGCAAAAGAACTGGGGAGGCAGAAGTaGCATAAACTGAGATCATGC +
Preference number: 3 (lower is better)
Translates to: GVVVQAAIPASQVAEAKELGRQK*HKLRSC
Trigger: GCATGATCTCAGTTTATGCAACTTCTGCCTCCCCAG...TTCTTTTGCCTCAGCCACCTGACTAGCTGGGATTGCAGCCTGCACCACCACACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000403140.6
3UTR TCA 72 bp TATCCTGAGGAAAGACTTTGTTCTGCCGTCGCCAAGTaGTGTAGTGAACGCCTCTCAGCCTGGCCAAGTCTA +
Preference number: 3 (lower is better)
Translates to: YPEERLCSAVAK*CSERLSAWPSL
Trigger: TAGACTTGGCCAGGCTGAGAGGCGTTCACTACATCACTTGGCGACGGCAGAACAAAGTCTTTCCTCAGGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403140.6
3UTR-3UTR CAA 90 bp TTTTTCAGAAGTCAATGCCTTGCTGATGCAAAGCGCAACATGCTTTTGTCATCCAGGTGGGAGGATTTCTaGAACCCAGAGTTCGAGACC +
Preference number: 3 (lower is better)
Translates to: FFRSQCLADAKRNMLLSSRWEDF*NPEFET
Trigger: GGTCTCGAACTCTGGGTTCAAGAAATCCTCCCACCT...GGATGACAAAAGCATGTTGCGCTTTGCATCAGCAAGGCATTGACTTCTGAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295571.9
ENST00000383701.8
3UTR TCA 72 bp GGCCACTTTGGGTGTTGCAATACGTGGTCTGCAGCCTaGAGGACAAGATACATAAATTCTTCTACATCGAAA +
Preference number: 3 (lower is better)
Translates to: GHFGCCNTWSAA*RTRYINSSTSK
Trigger: TTTCGATGTAGAAGAATTTATGTATCTTGTCCTTCAGGCTGCAGACCACGTATTGCAACACCCAAAGTGGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403140.6
3UTR TCA 72 bp GTTCTCGATGCATATAACCTGGAGGTGACTAAACGCTaGTCTATAACATGGTCCTATAGCTTGGTACTGAGA +
Preference number: 3 (lower is better)
Translates to: VLDAYNLEVTKR*SITWSYSLVLR
Trigger: TCTCAGTACCAAGCTATAGGACCATGTTATAGATCAGCGTTTAGTCACCTCCAGGTTATATGCATCGAGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000615922.1
3UTR TCA 72 bp TGTTTAGTCTGTGTAGTACATGCTGGGCAAATGCCCTaGATAGTCCAGTATTTTGACAGCCAGATATCAGAG +
Preference number: 3 (lower is better)
Translates to: CLVCVVHAGQMP*IVQYFDSQISE
Trigger: CTCTGATATCTGGCTGTCAAAATACTGGACTATTCAGGGCATTTGCCCAGCATGTACTACACAGACTAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403140.6
3UTR GCA 72 bp CTTAAATGGCCACTTTGGGTGTTGCAATACGTGGTCTaGAGCCTGAAGGACAAGATACATAAATTCTTCTAC +
Preference number: 3 (lower is better)
Translates to: LKWPLWVLQYVV*SLKDKIHKFFY
Trigger: GTAGAAGAATTTATGTATCTTGTCCTTCAGGCTGCAGACCACGTATTGCAACACCCAAAGTGGCCATTTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403140.6
3UTR-3UTR CAA 90 bp TTTTTCAGAAGTCAATGCCTTGCTGATGCAAAGCGCAACATGCTTTTGTCATCCACATGGTCCTATAGCTaGGTACTGAGAATCACAACT +
Preference number: 3 (lower is better)
Translates to: FFRSQCLADAKRNMLLSSTWSYS*VLRITT
Trigger: AGTTGTGATTCTCAGTACCAAGCTATAGGACCATGT...GGATGACAAAAGCATGTTGCGCTTTGCATCAGCAAGGCATTGACTTCTGAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000615922.1
CDS-3UTR GCA 90 bp GGTGTGGTGGTGCAGGCTGCAATCCCAGCTAGTCAGGTGGCTGAGGCAAAAGAAGCCGGGATGGGTGGCTaGACTCCTCCAGCACACGGA +
Preference number: 4 (lower is better)
Translates to: GVVVQAAIPASQVAEAKEAGMGG*TPPAHG
Trigger: TCCGTGTGCTGGAGGAGTGCAGCCACCCATCCCGGC...TTCTTTTGCCTCAGCCACCTGACTAGCTGGGATTGCAGCCTGCACCACCACACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000403140.6
CDS-3UTR GCA 90 bp GTGTGGTGGTGCAGGCTGCAATCCCAGCTAGTCAGGTGGCTGAGGCAAAAGAATTGGTGTCGGTCGTCCTaGAAGGCCCGCCGGGATGGG +
Preference number: 4 (lower is better)
Translates to: VWWCRLQSQLVRWLRQKNWCRSS*KARRDG
Trigger: CCCATCCCGGCGGGCCTTGCAGGACGACCGACACCA...ATTCTTTTGCCTCAGCCACCTGACTAGCTGGGATTGCAGCCTGCACCACCACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000403140.6
CDS-3UTR TCA 90 bp CGCTTGAACCTGGGGAGGCAGAAGTTGCATAAACTGAGATCATGCCACTGCACTGAGCCGGGGCAGCCGTaGACTACCGAGGAGGAGGCG +
Preference number: 4 (lower is better)
Translates to: RLNLGRQKLHKLRSCHCTEPGQP*TTEEEA
Trigger: CGCCTCCTCCTCGGTAGTTCACGGCTGCCCCGGCTC...AGTGCAGTGGCATGATCTCAGTTTATGCAACTTCTGCCTCCCCAGGTTCAAGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000403140.6
CDS-3UTR GCA 90 bp CGCTTGAACCTGGGGAGGCAGAAGTTGCATAAACTGAGATCATGCCACTGCACTGCCGGGATGGGTGGCTaGACTCCTCCAGCACACGGA +
Preference number: 4 (lower is better)
Translates to: RLNLGRQKLHKLRSCHCTAGMGG*TPPAHG
Trigger: TCCGTGTGCTGGAGGAGTGCAGCCACCCATCCCGGC...AGTGCAGTGGCATGATCTCAGTTTATGCAACTTCTGCCTCCCCAGGTTCAAGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000403140.6
CDS-3UTR GCA 90 bp GGTGTGGTGGTGCAGGCTGCAATCCCAGCTAGTCAGGTGGCTGAGGCAAAAGAAGTCATAACCGGCTACTaGCGCTCACCGGAAACCTCG +
Preference number: 4 (lower is better)
Translates to: GVVVQAAIPASQVAEAKEVITGY*RSPETS
Trigger: CGAGGTTTCCGGTGAGCGGCAGTAGCCGGTTATGAC...TTCTTTTGCCTCAGCCACCTGACTAGCTGGGATTGCAGCCTGCACCACCACACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383701.8
CDS-3UTR TCA 90 bp GGTGTGGTGGTGCAGGCTGCAATCCCAGCTAGTCAGGTGGCTGAGGCAAAAGAACGAAAGAGTAGTTGGTaGACTTCGGGTGCTCCCCCA +
Preference number: 4 (lower is better)
Translates to: GVVVQAAIPASQVAEAKERKSSW*TSGAPP
Trigger: TGGGGGAGCACCCGAAGTTCACCAACTACTCTTTCG...TTCTTTTGCCTCAGCCACCTGACTAGCTGGGATTGCAGCCTGCACCACCACACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000403140.6
CDS-3UTR CCA 90 bp AAGAATCGCTTGAACCTGGGGAGGCAGAAGTTGCATAAACTGAGATCATGCCACCAAGGCCCGCCGGGATaGGTGGCTGCACTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: KNRLNLGRQKLHKLRSCHQGPPG*VAALLQ
Trigger: CTGGAGGAGTGCAGCCACCCATCCCGGCGGGCCTTG...GTGGCATGATCTCAGTTTATGCAACTTCTGCCTCCCCAGGTTCAAGCGATTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000403140.6
CDS-3UTR TCA 90 bp CACAAATGCTCTCCATGGCTAAGAAGGAATCAGTGGAAACCAGACAGAAGGTATGAGCCGGGGCAGCCGTaGACTACCGAGGAGGAGGCG +
Preference number: 4 (lower is better)
Translates to: HKCSPWLRRNQWKPDRRYEPGQP*TTEEEA
Trigger: CGCCTCCTCCTCGGTAGTTCACGGCTGCCCCGGCTC...ATACCTTCTGTCTGGTTTCCACTGATTCCTTCTTAGCCATGGAGAGCATTTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295571.9
ENST00000383701.8
CDS-3UTR TCA 90 bp GGTGTGGTGGTGCAGGCTGCAATCCCAGCTAGTCAGGTGGCTGAGGCAAAAGAACTCGTTTCCTTAGGCTaGCAGAGCACATGCATCTCC +
Preference number: 4 (lower is better)
Translates to: GVVVQAAIPASQVAEAKELVSLG*QSTCIS
Trigger: GGAGATGCATGTGCTCTGTCAGCCTAAGGAAACGAG...TTCTTTTGCCTCAGCCACCTGACTAGCTGGGATTGCAGCCTGCACCACCACACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000403140.6
CDS-3UTR GCA 90 bp TGCTCTCCATGGCTAAGAAGGAATCAGTGGAAACCAGACAGAAGGTATGCAAGATGGTGTCGGTCGTCCTaGAAGGCCCGCCGGGATGGG +
Preference number: 4 (lower is better)
Translates to: CSPWLRRNQWKPDRRYARWCRSS*KARRDG
Trigger: CCCATCCCGGCGGGCCTTGCAGGACGACCGACACCA...TCTTGCATACCTTCTGTCTGGTTTCCACTGATTCCTTCTTAGCCATGGAGAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295571.9
ENST00000383701.8
CDS-3UTR GCA 90 bp CGCTTGAACCTGGGGAGGCAGAAGTTGCATAAACTGAGATCATGCCACTGCACTGGGCATGTACCCACTTaGATAAGGCGGCTGGGGGTG +
Preference number: 4 (lower is better)
Translates to: RLNLGRQKLHKLRSCHCTGHVPT*IRRLGV
Trigger: CACCCCCAGCCGCCTTATGCAAGTGGGTACATGCCC...AGTGCAGTGGCATGATCTCAGTTTATGCAACTTCTGCCTCCCCAGGTTCAAGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000403140.6
CDS-3UTR CCA 90 bp TGTAGTGAACGCCTCTCAGCCTGGCCAAGTCTAAGTAACAGCGTTCATCTTCACGGTGGCTGCTGGGCCTaGCACAAAGCCTTCCTGGTG +
Preference number: 4 (lower is better)
Translates to: CSERLSAWPSLSNSVHLHGGCWA*HKAFLV
Trigger: CACCAGGAAGGCTTTGTGCCAGGCCCAGCAGCCACC...GTGAAGATGAACGCTGTTACTTAGACTTGGCCAGGCTGAGAGGCGTTCACTACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403140.6
CDS-3UTR CCA 90 bp CGCTTGAACCTGGGGAGGCAGAAGTTGCATAAACTGAGATCATGCCACTGCACTGTGCTCCCCCAGGGTTaGATGGTGGCCCTTATCCTG +
Preference number: 4 (lower is better)
Translates to: RLNLGRQKLHKLRSCHCTVLPQG*MVALIL
Trigger: CAGGATAAGGGCCACCATCCAACCCTGGGGGAGCAC...AGTGCAGTGGCATGATCTCAGTTTATGCAACTTCTGCCTCCCCAGGTTCAAGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000403140.6
CDS-3UTR TCA 90 bp GTGTGGTGGTGCAGGCTGCAATCCCAGCTAGTCAGGTGGCTGAGGCAAAAGAATGGTGGGAGGATTTCTTaGACCCAGAGTTCGAGACCA +
Preference number: 4 (lower is better)
Translates to: VWWCRLQSQLVRWLRQKNGGRIS*TQSSRP
Trigger: TGGTCTCGAACTCTGGGTTCAAGAAATCCTCCCACC...ATTCTTTTGCCTCAGCCACCTGACTAGCTGGGATTGCAGCCTGCACCACCACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295571.9
ENST00000383701.8
CDS-3UTR CCA 90 bp AAGAATCGCTTGAACCTGGGGAGGCAGAAGTTGCATAAACTGAGATCATGCCACCGATTTCCACAGGCCTaGAGCCGGGGCAGCCGTGAA +
Preference number: 4 (lower is better)
Translates to: KNRLNLGRQKLHKLRSCHRFPQA*SRGSRE
Trigger: TTCACGGCTGCCCCGGCTCCAGGCCTGTGGAAATCG...GTGGCATGATCTCAGTTTATGCAACTTCTGCCTCCCCAGGTTCAAGCGATTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000403140.6
CDS-3UTR TCA 90 bp GTGGTCTGCAGCCTGAAGGACAAGATACATAAATTCTTCTACATCGAAAGAGTAGAGCCGGGGCAGCCGTaGACTACCGAGGAGGAGGCG +
Preference number: 4 (lower is better)
Translates to: VVCSLKDKIHKFFYIERVEPGQP*TTEEEA
Trigger: CGCCTCCTCCTCGGTAGTTCACGGCTGCCCCGGCTC...TACTCTTTCGATGTAGAAGAATTTATGTATCTTGTCCTTCAGGCTGCAGACCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403140.6
CDS-3UTR TCA 90 bp GTGTGGTGGTGCAGGCTGCAATCCCAGCTAGTCAGGTGGCTGAGGCAAAAGAATGGAGGAGCTTCATTCTaGCCACTCAGTGAGACTTCA +
Preference number: 4 (lower is better)
Translates to: VWWCRLQSQLVRWLRQKNGGASF*PLSETS
Trigger: TGAAGTCTCACTGAGTGGTCAGAATGAAGCTCCTCC...ATTCTTTTGCCTCAGCCACCTGACTAGCTGGGATTGCAGCCTGCACCACCACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000403140.6
CDS-3UTR TCA 90 bp GTGTGGTGGTGCAGGCTGCAATCCCAGCTAGTCAGGTGGCTGAGGCAAAAGAATAGAGGGCTTTTGCGCTaGCCTTCAGACGTCAATGTA +
Preference number: 4 (lower is better)
Translates to: VWWCRLQSQLVRWLRQKNRGLLR*PSDVNV
Trigger: TACATTGACGTCTGAAGGTCAGCGCAAAAGCCCTCT...ATTCTTTTGCCTCAGCCACCTGACTAGCTGGGATTGCAGCCTGCACCACCACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000403140.6
CDS-3UTR TCA 90 bp GGTGTGGTGGTGCAGGCTGCAATCCCAGCTAGTCAGGTGGCTGAGGCAAAAGAACCTATAGCTTGGTACTaGGAATCACAACTCTGCGTG +
Preference number: 4 (lower is better)
Translates to: GVVVQAAIPASQVAEAKEPIAWY*ESQLCV
Trigger: CACGCAGAGTTGTGATTCTCAGTACCAAGCTATAGG...TTCTTTTGCCTCAGCCACCTGACTAGCTGGGATTGCAGCCTGCACCACCACACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295571.9
ENST00000383701.8
CDS-3UTR GCA 90 bp GGTGTGGTGGTGCAGGCTGCAATCCCAGCTAGTCAGGTGGCTGAGGCAAAAGAAAAAAAGAAGGGAATGTaGTCCTCTGGCAAGCGGATG +
Preference number: 4 (lower is better)
Translates to: GVVVQAAIPASQVAEAKEKKKGM*SSGKRM
Trigger: CATCCGCTTGCCAGAGGAGCACATTCCCTTCTTTTT...TTCTTTTGCCTCAGCCACCTGACTAGCTGGGATTGCAGCCTGCACCACCACACC
53% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000403140.6
CDS-3UTR CCA 90 bp GTGTGGTGGTGCAGGCTGCAATCCCAGCTAGTCAGGTGGCTGAGGCAAAAGAATACACGGACGCTTTACTaGCCAGGCTACTTTTCCTTC +
Preference number: 4 (lower is better)
Translates to: VWWCRLQSQLVRWLRQKNTRTLY*PGYFSF
Trigger: GAAGGAAAAGTAGCCTGGCCAGTAAAGCGTCCGTGT...ATTCTTTTGCCTCAGCCACCTGACTAGCTGGGATTGCAGCCTGCACCACCACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000403140.6
CDS-3UTR CCA 90 bp TTTTTCAGAAGTCAATGCCTTGCTGATGCAAAGCGCAACATGCTTTTGTCATCCCAAGGCCCGCCGGGATaGGTGGCTGCACTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: FFRSQCLADAKRNMLLSSQGPPG*VAALLQ
Trigger: CTGGAGGAGTGCAGCCACCCATCCCGGCGGGCCTTG...GGATGACAAAAGCATGTTGCGCTTTGCATCAGCAAGGCATTGACTTCTGAAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295571.9
ENST00000383701.8
CDS-3UTR CCA 90 bp GAATACTTTCATGCTGACAGAGGTAGACGCACACGCACTGGTATATGCAGTTACGGTGGCTGCTGGGCCTaGCACAAAGCCTTCCTGGTG +
Preference number: 4 (lower is better)
Translates to: EYFHADRGRRTRTGICSYGGCWA*HKAFLV
Trigger: CACCAGGAAGGCTTTGTGCCAGGCCCAGCAGCCACC...GTAACTGCATATACCAGTGCGTGTGCGTCTACCTCTGTCAGCATGAAAGTATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295571.9
ENST00000383701.8
CDS-3UTR CCA 90 bp GTGTGGTGGTGCAGGCTGCAATCCCAGCTAGTCAGGTGGCTGAGGCAAAAGAATCCTCCAGCCTCTCTCTaGCATATCCAAAGTCAGCTT +
Preference number: 4 (lower is better)
Translates to: VWWCRLQSQLVRWLRQKNPPASL*HIQSQL
Trigger: AAGCTGACTTTGGATATGCCAGAGAGAGGCTGGAGG...ATTCTTTTGCCTCAGCCACCTGACTAGCTGGGATTGCAGCCTGCACCACCACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000403140.6
CDS-3UTR CCA 90 bp GTGTGGTGGTGCAGGCTGCAATCCCAGCTAGTCAGGTGGCTGAGGCAAAAGAATAAATTTAGCCAGGTGTaGTGGTGCAGGCTGCAATCC +
Preference number: 4 (lower is better)
Translates to: VWWCRLQSQLVRWLRQKNKFSQV*WCRLQS
Trigger: GGATTGCAGCCTGCACCACCACACCTGGCTAAATTT...ATTCTTTTGCCTCAGCCACCTGACTAGCTGGGATTGCAGCCTGCACCACCACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295571.9
ENST00000383701.8
CDS-3UTR TCA 90 bp GTGTGGTGGTGCAGGCTGCAATCCCAGCTAGTCAGGTGGCTGAGGCAAAAGAATGCTGGGCAAATGCCCTaGATAGTCCAGTATTTTGAC +
Preference number: 4 (lower is better)
Translates to: VWWCRLQSQLVRWLRQKNAGQMP*IVQYFD
Trigger: GTCAAAATACTGGACTATTCAGGGCATTTGCCCAGC...ATTCTTTTGCCTCAGCCACCTGACTAGCTGGGATTGCAGCCTGCACCACCACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383701.8
ENST00000403140.6
CDS-3UTR GCA 90 bp TTTTTCAGAAGTCAATGCCTTGCTGATGCAAAGCGCAACATGCTTTTGTCATCCGCCGGGATGGGTGGCTaGACTCCTCCAGCACACGGA +
Preference number: 4 (lower is better)
Translates to: FFRSQCLADAKRNMLLSSAGMGG*TPPAHG
Trigger: TCCGTGTGCTGGAGGAGTGCAGCCACCCATCCCGGC...GGATGACAAAAGCATGTTGCGCTTTGCATCAGCAAGGCATTGACTTCTGAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295571.9
ENST00000383701.8
CDS-3UTR GCA 90 bp CGCTTGAACCTGGGGAGGCAGAAGTTGCATAAACTGAGATCATGCCACTGCACTACTGCAGAGGGCTTTTaGGCTGACCTTCAGACGTCA +
Preference number: 4 (lower is better)
Translates to: RLNLGRQKLHKLRSCHCTTAEGF*ADLQTS
Trigger: TGACGTCTGAAGGTCAGCGCAAAAGCCCTCTGCAGT...AGTGCAGTGGCATGATCTCAGTTTATGCAACTTCTGCCTCCCCAGGTTCAAGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000403140.6
CDS-3UTR GCA 90 bp GGTGTGGTGGTGCAGGCTGCAATCCCAGCTAGTCAGGTGGCTGAGGCAAAAGAATTGCAATACGTGGTCTaGAGCCTGAAGGACAAGATA +
Preference number: 4 (lower is better)
Translates to: GVVVQAAIPASQVAEAKELQYVV*SLKDKI
Trigger: TATCTTGTCCTTCAGGCTGCAGACCACGTATTGCAA...TTCTTTTGCCTCAGCCACCTGACTAGCTGGGATTGCAGCCTGCACCACCACACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000403140.6
CDS-3UTR CCA 90 bp GAAGGAATCAGTGGAAACCAGACAGAAGGTATGCAAGACAGTCCTACAGAATGTCGATTTCCACAGGCCTaGAGCCGGGGCAGCCGTGAA +
Preference number: 4 (lower is better)
Translates to: EGISGNQTEGMQDSPTECRFPQA*SRGSRE
Trigger: TTCACGGCTGCCCCGGCTCCAGGCCTGTGGAAATCG...ACATTCTGTAGGACTGTCTTGCATACCTTCTGTCTGGTTTCCACTGATTCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295571.9
ENST00000383701.8
CDS-3UTR CCA 90 bp GGTAGACGCACACGCACTGGTATATGCAGTTACAAATACTCGCATAAAATGGAAGCTGGGGGTGGCTGCTaGGCCTGGCACAAAGCCTTC +
Preference number: 4 (lower is better)
Translates to: GRRTRTGICSYKYSHKMEAGGGC*AWHKAF
Trigger: GAAGGCTTTGTGCCAGGCCCAGCAGCCACCCCCAGC...TTCCATTTTATGCGAGTATTTGTAACTGCATATACCAGTGCGTGTGCGTCTACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295571.9
ENST00000383701.8
CDS-3UTR CCA 90 bp AAGAATCGCTTGAACCTGGGGAGGCAGAAGTTGCATAAACTGAGATCATGCCACCAGAAAGCTGGCGTCTaGCGAGGGCATGTACCCACT +
Preference number: 4 (lower is better)
Translates to: KNRLNLGRQKLHKLRSCHQKAGV*RGHVPT
Trigger: AGTGGGTACATGCCCTCGCCAGACGCCAGCTTTCTG...GTGGCATGATCTCAGTTTATGCAACTTCTGCCTCCCCAGGTTCAAGCGATTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000403140.6
CDS-3UTR CCA 90 bp TGCTCTCCATGGCTAAGAAGGAATCAGTGGAAACCAGACAGAAGGTATGCAAGAGTGCTCCCCCAGGGTTaGATGGTGGCCCTTATCCTG +
Preference number: 4 (lower is better)
Translates to: CSPWLRRNQWKPDRRYARVLPQG*MVALIL
Trigger: CAGGATAAGGGCCACCATCCAACCCTGGGGGAGCAC...TCTTGCATACCTTCTGTCTGGTTTCCACTGATTCCTTCTTAGCCATGGAGAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295571.9
ENST00000383701.8
CDS-3UTR CCA 90 bp GTGTGGTGGTGCAGGCTGCAATCCCAGCTAGTCAGGTGGCTGAGGCAAAAGAATAATACAAAAATCAACTaGGCGTGGTGGTGCACGCCT +
Preference number: 4 (lower is better)
Translates to: VWWCRLQSQLVRWLRQKNNTKIN*AWWCTP
Trigger: AGGCGTGCACCACCACGCCCAGTTGATTTTTGTATT...ATTCTTTTGCCTCAGCCACCTGACTAGCTGGGATTGCAGCCTGCACCACCACAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295571.9
ENST00000383701.8
CDS-3UTR TCA 90 bp CGCTTGAACCTGGGGAGGCAGAAGTTGCATAAACTGAGATCATGCCACTGCACTTCGCCTGGAATGCTGTaGGTATTAGGAGGAGCTTCA +
Preference number: 4 (lower is better)
Translates to: RLNLGRQKLHKLRSCHCTSPGML*VLGGAS
Trigger: TGAAGCTCCTCCTAATACTCACAGCATTCCAGGCGA...AGTGCAGTGGCATGATCTCAGTTTATGCAACTTCTGCCTCCCCAGGTTCAAGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000403140.6
CDS-3UTR TCA 90 bp CGCTTGAACCTGGGGAGGCAGAAGTTGCATAAACTGAGATCATGCCACTGCACTGGAACACACCAGACTTaGGTCACTCGTTTCCTTAGG +
Preference number: 4 (lower is better)
Translates to: RLNLGRQKLHKLRSCHCTGTHQT*VTRFLR
Trigger: CCTAAGGAAACGAGTGACTCAAGTCTGGTGTGTTCC...AGTGCAGTGGCATGATCTCAGTTTATGCAACTTCTGCCTCCCCAGGTTCAAGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000403140.6
CDS-3UTR TCA 90 bp CGCTTGAACCTGGGGAGGCAGAAGTTGCATAAACTGAGATCATGCCACTGCACTTGGTGGCCCTTATCCTaGGGAAAGACTTTGTTCTGC +
Preference number: 4 (lower is better)
Translates to: RLNLGRQKLHKLRSCHCTWWPLS*GKTLFC
Trigger: GCAGAACAAAGTCTTTCCTCAGGATAAGGGCCACCA...AGTGCAGTGGCATGATCTCAGTTTATGCAACTTCTGCCTCCCCAGGTTCAAGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000403140.6
CDS-3UTR TCA 90 bp GTGTGGTGGTGCAGGCTGCAATCCCAGCTAGTCAGGTGGCTGAGGCAAAAGAATAGAAGTTGCATAAACTaGGATCATGCCACTGCACTC +
Preference number: 4 (lower is better)
Translates to: VWWCRLQSQLVRWLRQKNRSCIN*DHATAL
Trigger: GAGTGCAGTGGCATGATCTCAGTTTATGCAACTTCT...ATTCTTTTGCCTCAGCCACCTGACTAGCTGGGATTGCAGCCTGCACCACCACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000403140.6
CDS-3UTR GCA 90 bp CACAAATGCTCTCCATGGCTAAGAAGGAATCAGTGGAAACCAGACAGAAGGTATGGGCATGTACCCACTTaGATAAGGCGGCTGGGGGTG +
Preference number: 4 (lower is better)
Translates to: HKCSPWLRRNQWKPDRRYGHVPT*IRRLGV
Trigger: CACCCCCAGCCGCCTTATGCAAGTGGGTACATGCCC...ATACCTTCTGTCTGGTTTCCACTGATTCCTTCTTAGCCATGGAGAGCATTTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295571.9
ENST00000383701.8
CDS-3UTR GCA 90 bp TATTCTGTGCTCCGTGCAAGAATGGTGACTCGAATTTTTCCATCCTTAGGTCCTGGGCATGTACCCACTTaGATAAGGCGGCTGGGGGTG +
Preference number: 4 (lower is better)
Translates to: YSVLRARMVTRIFPSLGPGHVPT*IRRLGV
Trigger: CACCCCCAGCCGCCTTATGCAAGTGGGTACATGCCC...AGGACCTAAGGATGGAAAAATTCGAGTCACCATTCTTGCACGGAGCACAGAATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000403140.6
CDS-3UTR GCA 90 bp GGTGTGGTGGTGCAGGCTGCAATCCCAGCTAGTCAGGTGGCTGAGGCAAAAGAAATGTCAAGTTTACAGTaGCCTCCAATTTCACCACTC +
Preference number: 4 (lower is better)
Translates to: GVVVQAAIPASQVAEAKEMSSLQ*PPISPL
Trigger: GAGTGGTGAAATTGGAGGGCACTGTAAACTTGACAT...TTCTTTTGCCTCAGCCACCTGACTAGCTGGGATTGCAGCCTGCACCACCACACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000403140.6
CDS-3UTR GCA 90 bp TGCTCTCCATGGCTAAGAAGGAATCAGTGGAAACCAGACAGAAGGTATGCAAGATTGGTGAACTTCGGGTaGTCCCCCAGGGTTGGATGG +
Preference number: 4 (lower is better)
Translates to: CSPWLRRNQWKPDRRYARLVNFG*SPRVGW
Trigger: CCATCCAACCCTGGGGGAGCACCCGAAGTTCACCAA...TCTTGCATACCTTCTGTCTGGTTTCCACTGATTCCTTCTTAGCCATGGAGAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295571.9
ENST00000383701.8
CDS-3UTR GCA 90 bp GTGTGGTGGTGCAGGCTGCAATCCCAGCTAGTCAGGTGGCTGAGGCAAAAGAATTTGCAATACGTGGTCTaGAGCCTGAAGGACAAGATA +
Preference number: 4 (lower is better)
Translates to: VWWCRLQSQLVRWLRQKNLQYVV*SLKDKI
Trigger: TATCTTGTCCTTCAGGCTGCAGACCACGTATTGCAA...ATTCTTTTGCCTCAGCCACCTGACTAGCTGGGATTGCAGCCTGCACCACCACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000403140.6
CDS-3UTR GCA 90 bp AAGAATCGCTTGAACCTGGGGAGGCAGAAGTTGCATAAACTGAGATCATGCCACGGCCACTTTGGGTGTTaGAATACGTGGTCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: KNRLNLGRQKLHKLRSCHGHFGC*NTWSAA
Trigger: GGCTGCAGACCACGTATTGCAACACCCAAAGTGGCC...GTGGCATGATCTCAGTTTATGCAACTTCTGCCTCCCCAGGTTCAAGCGATTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000403140.6
CDS-3UTR GCA 90 bp GGTGTGGTGGTGCAGGCTGCAATCCCAGCTAGTCAGGTGGCTGAGGCAAAAGAAACCAGACAGAAGGTATaGAAGACAGTCCTACAGAAT +
Preference number: 4 (lower is better)
Translates to: GVVVQAAIPASQVAEAKETRQKV*KTVLQN
Trigger: ATTCTGTAGGACTGTCTTGCATACCTTCTGTCTGGT...TTCTTTTGCCTCAGCCACCTGACTAGCTGGGATTGCAGCCTGCACCACCACACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295571.9
ENST00000383701.8
CDS-3UTR CCA 90 bp GTGGAAACCAGACAGAAGGTATGCAAGACAGTCCTACAGAATGTTCTAATTTGCGGTGGCTGCTGGGCCTaGCACAAAGCCTTCCTGGTG +
Preference number: 4 (lower is better)
Translates to: VETRQKVCKTVLQNVLICGGCWA*HKAFLV
Trigger: CACCAGGAAGGCTTTGTGCCAGGCCCAGCAGCCACC...GCAAATTAGAACATTCTGTAGGACTGTCTTGCATACCTTCTGTCTGGTTTCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295571.9
ENST00000383701.8
CDS-3UTR CCA 90 bp AAAAGTAAATGGGTCAGACCAGCTCCATGCATTCCAATAAATATGTCCGTGTTGGCTGGGGGTGGCTGCTaGGCCTGGCACAAAGCCTTC +
Preference number: 4 (lower is better)
Translates to: KSKWVRPAPCIPINMSVLAGGGC*AWHKAF
Trigger: GAAGGCTTTGTGCCAGGCCCAGCAGCCACCCCCAGC...CAACACGGACATATTTATTGGAATGCATGGAGCTGGTCTGACCCATTTACTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000403140.6
CDS-3UTR CCA 90 bp CTGACAGAGGTAGACGCACACGCACTGGTATATGCAGTTACAAATACTCGCATACGCAGATCAGAAAGCTaGCGTCTGGCGAGGGCATGT +
Preference number: 4 (lower is better)
Translates to: LTEVDAHALVYAVTNTRIRRSES*RLARAC
Trigger: ACATGCCCTCGCCAGACGCCAGCTTTCTGATCTGCG...TATGCGAGTATTTGTAACTGCATATACCAGTGCGTGTGCGTCTACCTCTGTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295571.9
ENST00000383701.8
CDS-3UTR CCA 90 bp ATGTTTCTTCTTAAATGGCCACTTTGGGTGTTGCAATACGTGGTCTGCAGCCTGCGCAGATCAGAAAGCTaGCGTCTGGCGAGGGCATGT +
Preference number: 4 (lower is better)
Translates to: MFLLKWPLWVLQYVVCSLRRSES*RLARAC
Trigger: ACATGCCCTCGCCAGACGCCAGCTTTCTGATCTGCG...CAGGCTGCAGACCACGTATTGCAACACCCAAAGTGGCCATTTAAGAAGAAACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403140.6
3UTR CAA 72 bp AGGCAAAAGAATCGCTTGAACCTGGGGAGGCAGAAGTaGCATAAACTGAGATCATGCCACTGCACTCCAGCC +
Preference number: 4 (lower is better)
Translates to: RQKNRLNLGRQK*HKLRSCHCTPA
Trigger: GGCTGGAGTGCAGTGGCATGATCTCAGTTTATGCAACTTCTGCCTCCCCAGGTTCAAGCGATTCTTTTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000403140.6
3UTR CAA 72 bp TCCCAGCTAGTCAGGTGGCTGAGGCAAAAGAATCGCTaGAACCTGGGGAGGCAGAAGTTGCATAAACTGAGA +
Preference number: 4 (lower is better)
Translates to: SQLVRWLRQKNR*NLGRQKLHKLR
Trigger: TCTCAGTTTATGCAACTTCTGCCTCCCCAGGTTCAAGCGATTCTTTTGCCTCAGCCACCTGACTAGCTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000403140.6
CDS-3UTR TCA 90 bp ATGTTTCTTCTTAAATGGCCACTTTGGGTGTTGCAATACGTGGTCTGCAGCCTGTCTGCCGTCGCCAAGTaGTGTAGTGAACGCCTCTCA +
Preference number: 4 (lower is better)
Translates to: MFLLKWPLWVLQYVVCSLSAVAK*CSERLS
Trigger: TGAGAGGCGTTCACTACATCACTTGGCGACGGCAGA...CAGGCTGCAGACCACGTATTGCAACACCCAAAGTGGCCATTTAAGAAGAAACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403140.6
CDS-3UTR TCA 90 bp CTGACAGAGGTAGACGCACACGCACTGGTATATGCAGTTACAAATACTCGCATACGAAAGAGTAGTTGGTaGACTTCGGGTGCTCCCCCA +
Preference number: 4 (lower is better)
Translates to: LTEVDAHALVYAVTNTRIRKSSW*TSGAPP
Trigger: TGGGGGAGCACCCGAAGTTCACCAACTACTCTTTCG...TATGCGAGTATTTGTAACTGCATATACCAGTGCGTGTGCGTCTACCTCTGTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295571.9
ENST00000383701.8
CDS-3UTR TCA 90 bp CGCTTGAACCTGGGGAGGCAGAAGTTGCATAAACTGAGATCATGCCACTGCACTAAGTCAATGCCTTGCTaGTGCAAAGCGCAACATGCT +
Preference number: 4 (lower is better)
Translates to: RLNLGRQKLHKLRSCHCTKSMPC*CKAQHA
Trigger: AGCATGTTGCGCTTTGCATCAGCAAGGCATTGACTT...AGTGCAGTGGCATGATCTCAGTTTATGCAACTTCTGCCTCCCCAGGTTCAAGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295571.9
ENST00000383701.8
CDS-3UTR GCA 90 bp GGTGTGGTGGTGCAGGCTGCAATCCCAGCTAGTCAGGTGGCTGAGGCAAAAGAACAGACAGTGGCAATATaGCTATTGTTGTGCAAAAAG +
Preference number: 4 (lower is better)
Translates to: GVVVQAAIPASQVAEAKEQTVAI*LLLCKK
Trigger: CTTTTTGCACAACAATAGGCATATTGCCACTGTCTG...TTCTTTTGCCTCAGCCACCTGACTAGCTGGGATTGCAGCCTGCACCACCACACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000403140.6
CDS-3UTR GCA 90 bp TATTCTGTGCTCCGTGCAAGAATGGTGACTCGAATTTTTCCATCCTTAGGTCCTTTGGTGAACTTCGGGTaGTCCCCCAGGGTTGGATGG +
Preference number: 4 (lower is better)
Translates to: YSVLRARMVTRIFPSLGPLVNFG*SPRVGW
Trigger: CCATCCAACCCTGGGGGAGCACCCGAAGTTCACCAA...AGGACCTAAGGATGGAAAAATTCGAGTCACCATTCTTGCACGGAGCACAGAATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000403140.6
CDS-3UTR CCA 90 bp GTGGTCTGCAGCCTGAAGGACAAGATACATAAATTCTTCTACATCGAAAGAGTACGATTTCCACAGGCCTaGAGCCGGGGCAGCCGTGAA +
Preference number: 4 (lower is better)
Translates to: VVCSLKDKIHKFFYIERVRFPQA*SRGSRE
Trigger: TTCACGGCTGCCCCGGCTCCAGGCCTGTGGAAATCG...TACTCTTTCGATGTAGAAGAATTTATGTATCTTGTCCTTCAGGCTGCAGACCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403140.6
CDS-3UTR CCA 90 bp TGCTCTCCATGGCTAAGAAGGAATCAGTGGAAACCAGACAGAAGGTATGCAAGAGGGAATGTGCTCCTCTaGCAAGCGGATGCTGGCATA +
Preference number: 4 (lower is better)
Translates to: CSPWLRRNQWKPDRRYARGNVLL*QADAGI
Trigger: TATGCCAGCATCCGCTTGCCAGAGGAGCACATTCCC...TCTTGCATACCTTCTGTCTGGTTTCCACTGATTCCTTCTTAGCCATGGAGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295571.9
ENST00000383701.8
CDS-3UTR CCA 90 bp TGTAGTGAACGCCTCTCAGCCTGGCCAAGTCTAAGTAACAGCGTTCATCTTCACCCTCCAGCCTCTCTCTaGCATATCCAAAGTCAGCTT +
Preference number: 4 (lower is better)
Translates to: CSERLSAWPSLSNSVHLHPPASL*HIQSQL
Trigger: AAGCTGACTTTGGATATGCCAGAGAGAGGCTGGAGG...GTGAAGATGAACGCTGTTACTTAGACTTGGCCAGGCTGAGAGGCGTTCACTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403140.6
CDS-3UTR TCA 90 bp CTGACAGAGGTAGACGCACACGCACTGGTATATGCAGTTACAAATACTCGCATACTCGTTTCCTTAGGCTaGCAGAGCACATGCATCTCC +
Preference number: 4 (lower is better)
Translates to: LTEVDAHALVYAVTNTRILVSLG*QSTCIS
Trigger: GGAGATGCATGTGCTCTGTCAGCCTAAGGAAACGAG...TATGCGAGTATTTGTAACTGCATATACCAGTGCGTGTGCGTCTACCTCTGTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295571.9
ENST00000383701.8
CDS-3UTR TCA 90 bp GGTGTGGTGGTGCAGGCTGCAATCCCAGCTAGTCAGGTGGCTGAGGCAAAAGAATGTGTGATCCTTAGTTaGTCTAAAAACCCAAGTTCT +
Preference number: 4 (lower is better)
Translates to: GVVVQAAIPASQVAEAKECVILS*SKNPSS
Trigger: AGAACTTGGGTTTTTAGATCAACTAAGGATCACACA...TTCTTTTGCCTCAGCCACCTGACTAGCTGGGATTGCAGCCTGCACCACCACACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000403140.6
CDS-3UTR TCA 90 bp TATTCTGTGCTCCGTGCAAGAATGGTGACTCGAATTTTTCCATCCTTAGGTCCTCGAAAGAGTAGTTGGTaGACTTCGGGTGCTCCCCCA +
Preference number: 4 (lower is better)
Translates to: YSVLRARMVTRIFPSLGPRKSSW*TSGAPP
Trigger: TGGGGGAGCACCCGAAGTTCACCAACTACTCTTTCG...AGGACCTAAGGATGGAAAAATTCGAGTCACCATTCTTGCACGGAGCACAGAATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000403140.6
CDS-3UTR TCA 90 bp CGCTTGAACCTGGGGAGGCAGAAGTTGCATAAACTGAGATCATGCCACTGCACTACGTGGTCTGCAGCCTaGAGGACAAGATACATAAAT +
Preference number: 4 (lower is better)
Translates to: RLNLGRQKLHKLRSCHCTTWSAA*RTRYIN
Trigger: ATTTATGTATCTTGTCCTTCAGGCTGCAGACCACGT...AGTGCAGTGGCATGATCTCAGTTTATGCAACTTCTGCCTCCCCAGGTTCAAGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000403140.6
CDS-3UTR GCA 90 bp AAGGAATCAGTGGAAACCAGACAGAAGGTATGCAAGACAGTCCTACAGAATGTTTTGGTGAACTTCGGGTaGTCCCCCAGGGTTGGATGG +
Preference number: 4 (lower is better)
Translates to: KESVETRQKVCKTVLQNVLVNFG*SPRVGW
Trigger: CCATCCAACCCTGGGGGAGCACCCGAAGTTCACCAA...AACATTCTGTAGGACTGTCTTGCATACCTTCTGTCTGGTTTCCACTGATTCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295571.9
ENST00000383701.8
CDS-3UTR CCA 90 bp GTGGAAACCAGACAGAAGGTATGCAAGACAGTCCTACAGAATGTTCTAATTTGCGGCACAAAGCCTTCCTaGTGTCGGTCGTCCTGCAAG +
Preference number: 4 (lower is better)
Translates to: VETRQKVCKTVLQNVLICGTKPS*CRSSCK
Trigger: CTTGCAGGACGACCGACACCAGGAAGGCTTTGTGCC...GCAAATTAGAACATTCTGTAGGACTGTCTTGCATACCTTCTGTCTGGTTTCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295571.9
ENST00000383701.8
CDS-3UTR CCA 90 bp AAGCTCATTTTGGTTAAGGATTTTCCGGTATTCTGTGCTCCGTGCAAGAATGGTGGCACAAAGCCTTCCTaGTGTCGGTCGTCCTGCAAG +
Preference number: 4 (lower is better)
Translates to: KLILVKDFPVFCAPCKNGGTKPS*CRSSCK
Trigger: CTTGCAGGACGACCGACACCAGGAAGGCTTTGTGCC...ACCATTCTTGCACGGAGCACAGAATACCGGAAAATCCTTAACCAAAATGAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403140.6
CDS-3UTR CCA 90 bp GGTAGACGCACACGCACTGGTATATGCAGTTACAAATACTCGCATAAAATGGAACAGAAAGCTGGCGTCTaGCGAGGGCATGTACCCACT +
Preference number: 4 (lower is better)
Translates to: GRRTRTGICSYKYSHKMEQKAGV*RGHVPT
Trigger: AGTGGGTACATGCCCTCGCCAGACGCCAGCTTTCTG...TTCCATTTTATGCGAGTATTTGTAACTGCATATACCAGTGCGTGTGCGTCTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295571.9
ENST00000383701.8
CDS-3UTR CCA 90 bp GTGGAAACCAGACAGAAGGTATGCAAGACAGTCCTACAGAATGTTCTAATTTGCCGCAGATCAGAAAGCTaGCGTCTGGCGAGGGCATGT +
Preference number: 4 (lower is better)
Translates to: VETRQKVCKTVLQNVLICRRSES*RLARAC
Trigger: ACATGCCCTCGCCAGACGCCAGCTTTCTGATCTGCG...GCAAATTAGAACATTCTGTAGGACTGTCTTGCATACCTTCTGTCTGGTTTCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295571.9
ENST00000383701.8
CDS-3UTR CCA 90 bp CACAAATGCTCTCCATGGCTAAGAAGGAATCAGTGGAAACCAGACAGAAGGTATGGGAATGTGCTCCTCTaGCAAGCGGATGCTGGCATA +
Preference number: 4 (lower is better)
Translates to: HKCSPWLRRNQWKPDRRYGNVLL*QADAGI
Trigger: TATGCCAGCATCCGCTTGCCAGAGGAGCACATTCCC...ATACCTTCTGTCTGGTTTCCACTGATTCCTTCTTAGCCATGGAGAGCATTTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295571.9
ENST00000383701.8
CDS-3UTR CCA 90 bp GGTGTGGTGGTGCAGGCTGCAATCCCAGCTAGTCAGGTGGCTGAGGCAAAAGAACCAATTTCACCACTCTaGAAAAAGTCCTCCTTAAAT +
Preference number: 4 (lower is better)
Translates to: GVVVQAAIPASQVAEAKEPISPL*KKSSLN
Trigger: ATTTAAGGAGGACTTTTTCCAGAGTGGTGAAATTGG...TTCTTTTGCCTCAGCCACCTGACTAGCTGGGATTGCAGCCTGCACCACCACACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000403140.6
CDS-3UTR CCA 90 bp CTGACAGAGGTAGACGCACACGCACTGGTATATGCAGTTACAAATACTCGCATAGAACGCCTCTCAGCCTaGCCAAGTCTAAGTAACAGC +
Preference number: 4 (lower is better)
Translates to: LTEVDAHALVYAVTNTRIERLSA*PSLSNS
Trigger: GCTGTTACTTAGACTTGGCCAGGCTGAGAGGCGTTC...TATGCGAGTATTTGTAACTGCATATACCAGTGCGTGTGCGTCTACCTCTGTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295571.9
ENST00000383701.8
CDS-3UTR CCA 90 bp GAATACTTTCATGCTGACAGAGGTAGACGCACACGCACTGGTATATGCAGTTACGAACGCCTCTCAGCCTaGCCAAGTCTAAGTAACAGC +
Preference number: 4 (lower is better)
Translates to: EYFHADRGRRTRTGICSYERLSA*PSLSNS
Trigger: GCTGTTACTTAGACTTGGCCAGGCTGAGAGGCGTTC...GTAACTGCATATACCAGTGCGTGTGCGTCTACCTCTGTCAGCATGAAAGTATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295571.9
ENST00000383701.8
CDS-3UTR CCA 90 bp AAAAGTAAATGGGTCAGACCAGCTCCATGCATTCCAATAAATATGTCCGTGTTGGTGCTCCCCCAGGGTTaGATGGTGGCCCTTATCCTG +
Preference number: 4 (lower is better)
Translates to: KSKWVRPAPCIPINMSVLVLPQG*MVALIL
Trigger: CAGGATAAGGGCCACCATCCAACCCTGGGGGAGCAC...CAACACGGACATATTTATTGGAATGCATGGAGCTGGTCTGACCCATTTACTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000403140.6
CDS-3UTR CCA 90 bp GGTGTGGTGGTGCAGGCTGCAATCCCAGCTAGTCAGGTGGCTGAGGCAAAAGAAATGTTTCTTCTTAAATaGCCACTTTGGGTGTTGCAA +
Preference number: 4 (lower is better)
Translates to: GVVVQAAIPASQVAEAKEMFLLK*PLWVLQ
Trigger: TTGCAACACCCAAAGTGGCCATTTAAGAAGAAACAT...TTCTTTTGCCTCAGCCACCTGACTAGCTGGGATTGCAGCCTGCACCACCACACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000403140.6
CDS-3UTR TCA 90 bp TGCTCTCCATGGCTAAGAAGGAATCAGTGGAAACCAGACAGAAGGTATGCAAGACACTCCAGAAACCCTTaGTTCGATTTCCACAGGCCT +
Preference number: 4 (lower is better)
Translates to: CSPWLRRNQWKPDRRYARHSRNP*FDFHRP
Trigger: AGGCCTGTGGAAATCGAATCAAGGGTTTCTGGAGTG...TCTTGCATACCTTCTGTCTGGTTTCCACTGATTCCTTCTTAGCCATGGAGAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295571.9
ENST00000383701.8
CDS-3UTR TCA 90 bp GTGTGGTGGTGCAGGCTGCAATCCCAGCTAGTCAGGTGGCTGAGGCAAAAGAATTGTGTGATCCTTAGTTaGTCTAAAAACCCAAGTTCT +
Preference number: 4 (lower is better)
Translates to: VWWCRLQSQLVRWLRQKNCVILS*SKNPSS
Trigger: AGAACTTGGGTTTTTAGATCAACTAAGGATCACACA...ATTCTTTTGCCTCAGCCACCTGACTAGCTGGGATTGCAGCCTGCACCACCACAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000403140.6
CDS-3UTR TCA 90 bp AAGGAATCAGTGGAAACCAGACAGAAGGTATGCAAGACAGTCCTACAGAATGTTTCTGCCGTCGCCAAGTaGTGTAGTGAACGCCTCTCA +
Preference number: 4 (lower is better)
Translates to: KESVETRQKVCKTVLQNVSAVAK*CSERLS
Trigger: TGAGAGGCGTTCACTACATCACTTGGCGACGGCAGA...AACATTCTGTAGGACTGTCTTGCATACCTTCTGTCTGGTTTCCACTGATTCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295571.9
ENST00000383701.8
CDS-3UTR TCA 90 bp GGTAGACGCACACGCACTGGTATATGCAGTTACAAATACTCGCATAAAATGGAATCTGCCGTCGCCAAGTaGTGTAGTGAACGCCTCTCA +
Preference number: 4 (lower is better)
Translates to: GRRTRTGICSYKYSHKMESAVAK*CSERLS
Trigger: TGAGAGGCGTTCACTACATCACTTGGCGACGGCAGA...TTCCATTTTATGCGAGTATTTGTAACTGCATATACCAGTGCGTGTGCGTCTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295571.9
ENST00000383701.8
CDS-3UTR TCA 90 bp GAATACTTTCATGCTGACAGAGGTAGACGCACACGCACTGGTATATGCAGTTACTGGTGGCCCTTATCCTaGGGAAAGACTTTGTTCTGC +
Preference number: 4 (lower is better)
Translates to: EYFHADRGRRTRTGICSYWWPLS*GKTLFC
Trigger: GCAGAACAAAGTCTTTCCTCAGGATAAGGGCCACCA...GTAACTGCATATACCAGTGCGTGTGCGTCTACCTCTGTCAGCATGAAAGTATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295571.9
ENST00000383701.8
CDS-3UTR TCA 90 bp TGTAGTGAACGCCTCTCAGCCTGGCCAAGTCTAAGTAACAGCGTTCATCTTCACAGAAGTTGCATAAACTaGGATCATGCCACTGCACTC +
Preference number: 4 (lower is better)
Translates to: CSERLSAWPSLSNSVHLHRSCIN*DHATAL
Trigger: GAGTGCAGTGGCATGATCTCAGTTTATGCAACTTCT...GTGAAGATGAACGCTGTTACTTAGACTTGGCCAGGCTGAGAGGCGTTCACTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403140.6
CDS-3UTR TCA 90 bp AGTCAATGCCTTGCTGATGCAAAGCGCAACATGCTTTTGTCATCCCTTTCATCTGGTGGGAGGATTTCTTaGACCCAGAGTTCGAGACCA +
Preference number: 4 (lower is better)
Translates to: SQCLADAKRNMLLSSLSSGGRIS*TQSSRP
Trigger: TGGTCTCGAACTCTGGGTTCAAGAAATCCTCCCACC...AGATGAAAGGGATGACAAAAGCATGTTGCGCTTTGCATCAGCAAGGCATTGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000615922.1
CDS-3UTR TCA 90 bp AAGAATCGCTTGAACCTGGGGAGGCAGAAGTTGCATAAACTGAGATCATGCCACCCTATAGCTTGGTACTaGGAATCACAACTCTGCGTG +
Preference number: 4 (lower is better)
Translates to: KNRLNLGRQKLHKLRSCHPIAWY*ESQLCV
Trigger: CACGCAGAGTTGTGATTCTCAGTACCAAGCTATAGG...GTGGCATGATCTCAGTTTATGCAACTTCTGCCTCCCCAGGTTCAAGCGATTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295571.9
ENST00000383701.8
CDS-3UTR GCA 90 bp CTGACAGAGGTAGACGCACACGCACTGGTATATGCAGTTACAAATACTCGCATACCTCTGGCAAGCGGATaGTGGCATAGTTATACAGAG +
Preference number: 4 (lower is better)
Translates to: LTEVDAHALVYAVTNTRIPLASG*WHSYTE
Trigger: CTCTGTATAACTATGCCAGCATCCGCTTGCCAGAGG...TATGCGAGTATTTGTAACTGCATATACCAGTGCGTGTGCGTCTACCTCTGTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295571.9
ENST00000383701.8
CDS-3UTR GCA 90 bp TGCTCTCCATGGCTAAGAAGGAATCAGTGGAAACCAGACAGAAGGTATGCAAGACCTCTGGCAAGCGGATaGTGGCATAGTTATACAGAG +
Preference number: 4 (lower is better)
Translates to: CSPWLRRNQWKPDRRYARPLASG*WHSYTE
Trigger: CTCTGTATAACTATGCCAGCATCCGCTTGCCAGAGG...TCTTGCATACCTTCTGTCTGGTTTCCACTGATTCCTTCTTAGCCATGGAGAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295571.9
ENST00000383701.8
CDS-3UTR GCA 90 bp GTGGAAACCAGACAGAAGGTATGCAAGACAGTCCTACAGAATGTTCTAATTTGCGGCCACTTTGGGTGTTaGAATACGTGGTCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: VETRQKVCKTVLQNVLICGHFGC*NTWSAA
Trigger: GGCTGCAGACCACGTATTGCAACACCCAAAGTGGCC...GCAAATTAGAACATTCTGTAGGACTGTCTTGCATACCTTCTGTCTGGTTTCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295571.9
ENST00000383701.8
CDS-3UTR GCA 90 bp TTTCCATCCTTAGGTCCTTCTTGTGTGATGTTTAGTCTGTGTAGTACATGCTGGGGCCACTTTGGGTGTTaGAATACGTGGTCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: FPSLGPSCVMFSLCSTCWGHFGC*NTWSAA
Trigger: GGCTGCAGACCACGTATTGCAACACCCAAAGTGGCC...CCAGCATGTACTACACAGACTAAACATCACACAAGAAGGACCTAAGGATGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403140.6
CDS-3UTR GCA 90 bp CGCTTGAACCTGGGGAGGCAGAAGTTGCATAAACTGAGATCATGCCACTGCACTTTTTTCAGAAGTCAATaGCTTGCTGATGCAAAGCGC +
Preference number: 4 (lower is better)
Translates to: RLNLGRQKLHKLRSCHCTFFRSQ*LADAKR
Trigger: GCGCTTTGCATCAGCAAGGCATTGACTTCTGAAAAA...AGTGCAGTGGCATGATCTCAGTTTATGCAACTTCTGCCTCCCCAGGTTCAAGCG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000295571.9
ENST00000383701.8
CDS-3UTR CCA 90 bp AAAAGTAAATGGGTCAGACCAGCTCCATGCATTCCAATAAATATGTCCGTGTTGCAGAAAGCTGGCGTCTaGCGAGGGCATGTACCCACT +
Preference number: 4 (lower is better)
Translates to: KSKWVRPAPCIPINMSVLQKAGV*RGHVPT
Trigger: AGTGGGTACATGCCCTCGCCAGACGCCAGCTTTCTG...CAACACGGACATATTTATTGGAATGCATGGAGCTGGTCTGACCCATTTACTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403140.6
CDS-3UTR CCA 90 bp TATTCTGTGCTCCGTGCAAGAATGGTGACTCGAATTTTTCCATCCTTAGGTCCTGAACGCCTCTCAGCCTaGCCAAGTCTAAGTAACAGC +
Preference number: 4 (lower is better)
Translates to: YSVLRARMVTRIFPSLGPERLSA*PSLSNS
Trigger: GCTGTTACTTAGACTTGGCCAGGCTGAGAGGCGTTC...AGGACCTAAGGATGGAAAAATTCGAGTCACCATTCTTGCACGGAGCACAGAATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403140.6
CDS-3UTR CCA 90 bp TGCTCTCCATGGCTAAGAAGGAATCAGTGGAAACCAGACAGAAGGTATGCAAGAAAATTTAGCCAGGTGTaGTGGTGCAGGCTGCAATCC +
Preference number: 4 (lower is better)
Translates to: CSPWLRRNQWKPDRRYARKFSQV*WCRLQS
Trigger: GGATTGCAGCCTGCACCACCACACCTGGCTAAATTT...TCTTGCATACCTTCTGTCTGGTTTCCACTGATTCCTTCTTAGCCATGGAGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295571.9
ENST00000383701.8
CDS-3UTR TCA 90 bp CACAAATGCTCTCCATGGCTAAGAAGGAATCAGTGGAAACCAGACAGAAGGTATGGAGGAGCTTCATTCTaGCCACTCAGTGAGACTTCA +
Preference number: 4 (lower is better)
Translates to: HKCSPWLRRNQWKPDRRYGGASF*PLSETS
Trigger: TGAAGTCTCACTGAGTGGTCAGAATGAAGCTCCTCC...ATACCTTCTGTCTGGTTTCCACTGATTCCTTCTTAGCCATGGAGAGCATTTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295571.9
ENST00000383701.8
CDS-3UTR TCA 90 bp CTGACAGAGGTAGACGCACACGCACTGGTATATGCAGTTACAAATACTCGCATAAAATATGTCCTCAGCTaGCTCAAGAGTGTCCGTCCA +
Preference number: 4 (lower is better)
Translates to: LTEVDAHALVYAVTNTRIKYVLS*LKSVRP
Trigger: TGGACGGACACTCTTGAGTCAGCTGAGGACATATTT...TATGCGAGTATTTGTAACTGCATATACCAGTGCGTGTGCGTCTACCTCTGTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295571.9
ENST00000383701.8
CDS-3UTR TCA 90 bp TTTTTCAGAAGTCAATGCCTTGCTGATGCAAAGCGCAACATGCTTTTGTCATCCCTCGTTTCCTTAGGCTaGCAGAGCACATGCATCTCC +
Preference number: 4 (lower is better)
Translates to: FFRSQCLADAKRNMLLSSLVSLG*QSTCIS
Trigger: GGAGATGCATGTGCTCTGTCAGCCTAAGGAAACGAG...GGATGACAAAAGCATGTTGCGCTTTGCATCAGCAAGGCATTGACTTCTGAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295571.9
ENST00000383701.8
CDS-3UTR TCA 90 bp TATTCTGTGCTCCGTGCAAGAATGGTGACTCGAATTTTTCCATCCTTAGGTCCTGGAACACACCAGACTTaGGTCACTCGTTTCCTTAGG +
Preference number: 4 (lower is better)
Translates to: YSVLRARMVTRIFPSLGPGTHQT*VTRFLR
Trigger: CCTAAGGAAACGAGTGACTCAAGTCTGGTGTGTTCC...AGGACCTAAGGATGGAAAAATTCGAGTCACCATTCTTGCACGGAGCACAGAATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403140.6
CDS-3UTR TCA 90 bp TATTCTGTGCTCCGTGCAAGAATGGTGACTCGAATTTTTCCATCCTTAGGTCCTAGAGGGCTTTTGCGCTaGCCTTCAGACGTCAATGTA +
Preference number: 4 (lower is better)
Translates to: YSVLRARMVTRIFPSLGPRGLLR*PSDVNV
Trigger: TACATTGACGTCTGAAGGTCAGCGCAAAAGCCCTCT...AGGACCTAAGGATGGAAAAATTCGAGTCACCATTCTTGCACGGAGCACAGAATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000403140.6
CDS-3UTR TCA 90 bp CGCTTGAACCTGGGGAGGCAGAAGTTGCATAAACTGAGATCATGCCACTGCACTTGTCCGTGTTGTGTGTaGTCCTTAGTTGATCTAAAA +
Preference number: 4 (lower is better)
Translates to: RLNLGRQKLHKLRSCHCTCPCCV*SLVDLK
Trigger: TTTTAGATCAACTAAGGATCACACACAACACGGACA...AGTGCAGTGGCATGATCTCAGTTTATGCAACTTCTGCCTCCCCAGGTTCAAGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000403140.6
CDS-3UTR TCA 90 bp AAGAATCGCTTGAACCTGGGGAGGCAGAAGTTGCATAAACTGAGATCATGCCACACGTGGTCTGCAGCCTaGAGGACAAGATACATAAAT +
Preference number: 4 (lower is better)
Translates to: KNRLNLGRQKLHKLRSCHTWSAA*RTRYIN
Trigger: ATTTATGTATCTTGTCCTTCAGGCTGCAGACCACGT...GTGGCATGATCTCAGTTTATGCAACTTCTGCCTCCCCAGGTTCAAGCGATTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000403140.6
CDS-3UTR TCA 90 bp AAGGAATCAGTGGAAACCAGACAGAAGGTATGCAAGACAGTCCTACAGAATGTTGGTGGGAGGATTTCTTaGACCCAGAGTTCGAGACCA +
Preference number: 4 (lower is better)
Translates to: KESVETRQKVCKTVLQNVGGRIS*TQSSRP
Trigger: TGGTCTCGAACTCTGGGTTCAAGAAATCCTCCCACC...AACATTCTGTAGGACTGTCTTGCATACCTTCTGTCTGGTTTCCACTGATTCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000615922.1
CDS-3UTR GCA 90 bp GTGTGGTGGTGCAGGCTGCAATCCCAGCTAGTCAGGTGGCTGAGGCAAAAGAATATTAACATAGCAACCTaGAAACCTCTTGAATCTTCA +
Preference number: 4 (lower is better)
Translates to: VWWCRLQSQLVRWLRQKNINIAT*KPLESS
Trigger: TGAAGATTCAAGAGGTTTGCAGGTTGCTATGTTAAT...ATTCTTTTGCCTCAGCCACCTGACTAGCTGGGATTGCAGCCTGCACCACCACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000403140.6
CDS-3UTR GCA 90 bp TATTCTGTGCTCCGTGCAAGAATGGTGACTCGAATTTTTCCATCCTTAGGTCCTCCTCTGGCAAGCGGATaGTGGCATAGTTATACAGAG +
Preference number: 4 (lower is better)
Translates to: YSVLRARMVTRIFPSLGPPLASG*WHSYTE
Trigger: CTCTGTATAACTATGCCAGCATCCGCTTGCCAGAGG...AGGACCTAAGGATGGAAAAATTCGAGTCACCATTCTTGCACGGAGCACAGAATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403140.6
CDS-3UTR GCA 90 bp CGCTTGAACCTGGGGAGGCAGAAGTTGCATAAACTGAGATCATGCCACTGCACTCAGACAGTGGCAATATaGCTATTGTTGTGCAAAAAG +
Preference number: 4 (lower is better)
Translates to: RLNLGRQKLHKLRSCHCTQTVAI*LLLCKK
Trigger: CTTTTTGCACAACAATAGGCATATTGCCACTGTCTG...AGTGCAGTGGCATGATCTCAGTTTATGCAACTTCTGCCTCCCCAGGTTCAAGCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000403140.6
CDS-3UTR GCA 90 bp AAGAATCGCTTGAACCTGGGGAGGCAGAAGTTGCATAAACTGAGATCATGCCACAGAGATTGGTTGCTCTaGAGTACTGAAGATAACGGG +
Preference number: 4 (lower is better)
Translates to: KNRLNLGRQKLHKLRSCHRDWLL*STEDNG
Trigger: CCCGTTATCTTCAGTACTGCAGAGCAACCAATCTCT...GTGGCATGATCTCAGTTTATGCAACTTCTGCCTCCCCAGGTTCAAGCGATTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000403140.6
CDS-3UTR GCA 90 bp TTTCCATCCTTAGGTCCTTCTTGTGTGATGTTTAGTCTGTGTAGTACATGCTGGACTGCAGAGGGCTTTTaGGCTGACCTTCAGACGTCA +
Preference number: 4 (lower is better)
Translates to: FPSLGPSCVMFSLCSTCWTAEGF*ADLQTS
Trigger: TGACGTCTGAAGGTCAGCGCAAAAGCCCTCTGCAGT...CCAGCATGTACTACACAGACTAAACATCACACAAGAAGGACCTAAGGATGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403140.6
CDS-3UTR CCA 90 bp GTGGTCTGCAGCCTGAAGGACAAGATACATAAATTCTTCTACATCGAAAGAGTAGGGAATGTGCTCCTCTaGCAAGCGGATGCTGGCATA +
Preference number: 4 (lower is better)
Translates to: VVCSLKDKIHKFFYIERVGNVLL*QADAGI
Trigger: TATGCCAGCATCCGCTTGCCAGAGGAGCACATTCCC...TACTCTTTCGATGTAGAAGAATTTATGTATCTTGTCCTTCAGGCTGCAGACCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403140.6
CDS-3UTR CCA 90 bp CACAAATGCTCTCCATGGCTAAGAAGGAATCAGTGGAAACCAGACAGAAGGTATAAAATCAACTGGGCGTaGTGGTGCACGCCTGTAATC +
Preference number: 4 (lower is better)
Translates to: HKCSPWLRRNQWKPDRRYKINWA*WCTPVI
Trigger: GATTACAGGCGTGCACCACCACGCCCAGTTGATTTT...ATACCTTCTGTCTGGTTTCCACTGATTCCTTCTTAGCCATGGAGAGCATTTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000615922.1
CDS-3UTR TCA 90 bp GGTAGACGCACACGCACTGGTATATGCAGTTACAAATACTCGCATAAAATGGAACACTCCAGAAACCCTTaGTTCGATTTCCACAGGCCT +
Preference number: 4 (lower is better)
Translates to: GRRTRTGICSYKYSHKMEHSRNP*FDFHRP
Trigger: AGGCCTGTGGAAATCGAATCAAGGGTTTCTGGAGTG...TTCCATTTTATGCGAGTATTTGTAACTGCATATACCAGTGCGTGTGCGTCTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295571.9
ENST00000383701.8
CDS-3UTR TCA 90 bp CTGACAGAGGTAGACGCACACGCACTGGTATATGCAGTTACAAATACTCGCATAAACCTGCAAACCTCTTaGATCTTCAGAACCACTCAG +
Preference number: 4 (lower is better)
Translates to: LTEVDAHALVYAVTNTRINLQTS*IFRTTQ
Trigger: CTGAGTGGTTCTGAAGATTCAAGAGGTTTGCAGGTT...TATGCGAGTATTTGTAACTGCATATACCAGTGCGTGTGCGTCTACCTCTGTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295571.9
ENST00000383701.8
CDS-3UTR TCA 90 bp TTTTTCAGAAGTCAATGCCTTGCTGATGCAAAGCGCAACATGCTTTTGTCATCCGGAGGAGCTTCATTCTaGCCACTCAGTGAGACTTCA +
Preference number: 4 (lower is better)
Translates to: FFRSQCLADAKRNMLLSSGGASF*PLSETS
Trigger: TGAAGTCTCACTGAGTGGTCAGAATGAAGCTCCTCC...GGATGACAAAAGCATGTTGCGCTTTGCATCAGCAAGGCATTGACTTCTGAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295571.9
ENST00000383701.8
CDS-3UTR TCA 90 bp TATTCTGTGCTCCGTGCAAGAATGGTGACTCGAATTTTTCCATCCTTAGGTCCTAAATATGTCCTCAGCTaGCTCAAGAGTGTCCGTCCA +
Preference number: 4 (lower is better)
Translates to: YSVLRARMVTRIFPSLGPKYVLS*LKSVRP
Trigger: TGGACGGACACTCTTGAGTCAGCTGAGGACATATTT...AGGACCTAAGGATGGAAAAATTCGAGTCACCATTCTTGCACGGAGCACAGAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403140.6
CDS-3UTR TCA 90 bp GTGGAAACCAGACAGAAGGTATGCAAGACAGTCCTACAGAATGTTCTAATTTGCGGAACACACCAGACTTaGGTCACTCGTTTCCTTAGG +
Preference number: 4 (lower is better)
Translates to: VETRQKVCKTVLQNVLICGTHQT*VTRFLR
Trigger: CCTAAGGAAACGAGTGACTCAAGTCTGGTGTGTTCC...GCAAATTAGAACATTCTGTAGGACTGTCTTGCATACCTTCTGTCTGGTTTCCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295571.9
ENST00000383701.8
CDS-3UTR TCA 90 bp TTTTTCAGAAGTCAATGCCTTGCTGATGCAAAGCGCAACATGCTTTTGTCATCCTGGTGGCCCTTATCCTaGGGAAAGACTTTGTTCTGC +
Preference number: 4 (lower is better)
Translates to: FFRSQCLADAKRNMLLSSWWPLS*GKTLFC
Trigger: GCAGAACAAAGTCTTTCCTCAGGATAAGGGCCACCA...GGATGACAAAAGCATGTTGCGCTTTGCATCAGCAAGGCATTGACTTCTGAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295571.9
ENST00000383701.8
CDS-3UTR TCA 90 bp TTTTTCAGAAGTCAATGCCTTGCTGATGCAAAGCGCAACATGCTTTTGTCATCCGCCTGGCCAACATGGTaGAACTCCGTCTCTATCAAA +
Preference number: 4 (lower is better)
Translates to: FFRSQCLADAKRNMLLSSAWPTW*NSVSIK
Trigger: TTTGATAGAGACGGAGTTTCACCATGTTGGCCAGGC...GGATGACAAAAGCATGTTGCGCTTTGCATCAGCAAGGCATTGACTTCTGAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000615922.1
CDS-3UTR TCA 90 bp GGTAGACGCACACGCACTGGTATATGCAGTTACAAATACTCGCATAAAATGGAAGCCTGGCCAACATGGTaGAACTCCGTCTCTATCAAA +
Preference number: 4 (lower is better)
Translates to: GRRTRTGICSYKYSHKMEAWPTW*NSVSIK
Trigger: TTTGATAGAGACGGAGTTTCACCATGTTGGCCAGGC...TTCCATTTTATGCGAGTATTTGTAACTGCATATACCAGTGCGTGTGCGTCTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000615922.1
CDS-3UTR TCA 90 bp CACAAATGCTCTCCATGGCTAAGAAGGAATCAGTGGAAACCAGACAGAAGGTATCCTATAGCTTGGTACTaGGAATCACAACTCTGCGTG +
Preference number: 4 (lower is better)
Translates to: HKCSPWLRRNQWKPDRRYPIAWY*ESQLCV
Trigger: CACGCAGAGTTGTGATTCTCAGTACCAAGCTATAGG...ATACCTTCTGTCTGGTTTCCACTGATTCCTTCTTAGCCATGGAGAGCATTTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000615922.1
CDS-3UTR TCA 90 bp CACAAATGCTCTCCATGGCTAAGAAGGAATCAGTGGAAACCAGACAGAAGGTATAAGTCAATGCCTTGCTaGTGCAAAGCGCAACATGCT +
Preference number: 4 (lower is better)
Translates to: HKCSPWLRRNQWKPDRRYKSMPC*CKAQHA
Trigger: AGCATGTTGCGCTTTGCATCAGCAAGGCATTGACTT...ATACCTTCTGTCTGGTTTCCACTGATTCCTTCTTAGCCATGGAGAGCATTTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000615922.1
CDS-3UTR TCA 90 bp GAATACTTTCATGCTGACAGAGGTAGACGCACACGCACTGGTATATGCAGTTACTCCGTGCAAGAATGGTaGCTCGAATTTTTCCATCCT +
Preference number: 4 (lower is better)
Translates to: EYFHADRGRRTRTGICSYSVQEW*LEFFHP
Trigger: AGGATGGAAAAATTCGAGTCACCATTCTTGCACGGA...GTAACTGCATATACCAGTGCGTGTGCGTCTACCTCTGTCAGCATGAAAGTATTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000383701.8
CDS-3UTR GCA 90 bp GAAGGAATCAGTGGAAACCAGACAGAAGGTATGCAAGACAGTCCTACAGAATGTAAAAAGAAGGGAATGTaGTCCTCTGGCAAGCGGATG +
Preference number: 4 (lower is better)
Translates to: EGISGNQTEGMQDSPTECKKKGM*SSGKRM
Trigger: CATCCGCTTGCCAGAGGAGCACATTCCCTTCTTTTT...ACATTCTGTAGGACTGTCTTGCATACCTTCTGTCTGGTTTCCACTGATTCCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295571.9
ENST00000383701.8
CDS-3UTR GCA 90 bp TGCTCTCCATGGCTAAGAAGGAATCAGTGGAAACCAGACAGAAGGTATGCAAGAGTATTCTGTGCTCCGTaGAAGAATGGTGACTCGAAT +
Preference number: 4 (lower is better)
Translates to: CSPWLRRNQWKPDRRYARVFCAP*KNGDSN
Trigger: ATTCGAGTCACCATTCTTGCACGGAGCACAGAATAC...TCTTGCATACCTTCTGTCTGGTTTCCACTGATTCCTTCTTAGCCATGGAGAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295571.9
ENST00000383701.8
CDS-3UTR GCA 90 bp ATGTTTCTTCTTAAATGGCCACTTTGGGTGTTGCAATACGTGGTCTGCAGCCTGTTGCAATACGTGGTCTaGAGCCTGAAGGACAAGATA +
Preference number: 4 (lower is better)
Translates to: MFLLKWPLWVLQYVVCSLLQYVV*SLKDKI
Trigger: TATCTTGTCCTTCAGGCTGCAGACCACGTATTGCAA...CAGGCTGCAGACCACGTATTGCAACACCCAAAGTGGCCATTTAAGAAGAAACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403140.6
CDS-3UTR CCA 90 bp GGTAGACGCACACGCACTGGTATATGCAGTTACAAATACTCGCATAAAATGGAAACACGGACGCTTTACTaGCCAGGCTACTTTTCCTTC +
Preference number: 4 (lower is better)
Translates to: GRRTRTGICSYKYSHKMETRTLY*PGYFSF
Trigger: GAAGGAAAAGTAGCCTGGCCAGTAAAGCGTCCGTGT...TTCCATTTTATGCGAGTATTTGTAACTGCATATACCAGTGCGTGTGCGTCTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295571.9
ENST00000383701.8
CDS-3UTR CCA 90 bp GAATACTTTCATGCTGACAGAGGTAGACGCACACGCACTGGTATATGCAGTTACATACAGAGGTTCGCCTaGAATGCTGTGAGTATTAGG +
Preference number: 4 (lower is better)
Translates to: EYFHADRGRRTRTGICSYIQRFA*NAVSIR
Trigger: CCTAATACTCACAGCATTCCAGGCGAACCTCTGTAT...GTAACTGCATATACCAGTGCGTGTGCGTCTACCTCTGTCAGCATGAAAGTATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295571.9
ENST00000383701.8
CDS-3UTR CCA 90 bp AGTCAATGCCTTGCTGATGCAAAGCGCAACATGCTTTTGTCATCCCTTTCATCTCTGGCAAGCGGATGCTaGCATAGTTATACAGAGGTT +
Preference number: 4 (lower is better)
Translates to: SQCLADAKRNMLLSSLSSLASGC*HSYTEV
Trigger: AACCTCTGTATAACTATGCCAGCATCCGCTTGCCAG...AGATGAAAGGGATGACAAAAGCATGTTGCGCTTTGCATCAGCAAGGCATTGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295571.9
ENST00000383701.8
CDS-3UTR CCA 90 bp TTTTTCAGAAGTCAATGCCTTGCTGATGCAAAGCGCAACATGCTTTTGTCATCCCCTCCAGCCTCTCTCTaGCATATCCAAAGTCAGCTT +
Preference number: 4 (lower is better)
Translates to: FFRSQCLADAKRNMLLSSPPASL*HIQSQL
Trigger: AAGCTGACTTTGGATATGCCAGAGAGAGGCTGGAGG...GGATGACAAAAGCATGTTGCGCTTTGCATCAGCAAGGCATTGACTTCTGAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295571.9
ENST00000383701.8
CDS-3UTR CCA 90 bp TGCTCTCCATGGCTAAGAAGGAATCAGTGGAAACCAGACAGAAGGTATGCAAGACTTAAATGGCCACTTTaGGTGTTGCAATACGTGGTC +
Preference number: 4 (lower is better)
Translates to: CSPWLRRNQWKPDRRYARLKWPL*VLQYVV
Trigger: GACCACGTATTGCAACACCCAAAGTGGCCATTTAAG...TCTTGCATACCTTCTGTCTGGTTTCCACTGATTCCTTCTTAGCCATGGAGAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295571.9
ENST00000383701.8
CDS-3UTR CCA 90 bp GAATACTTTCATGCTGACAGAGGTAGACGCACACGCACTGGTATATGCAGTTACCTTAAATGGCCACTTTaGGTGTTGCAATACGTGGTC +
Preference number: 4 (lower is better)
Translates to: EYFHADRGRRTRTGICSYLKWPL*VLQYVV
Trigger: GACCACGTATTGCAACACCCAAAGTGGCCATTTAAG...GTAACTGCATATACCAGTGCGTGTGCGTCTACCTCTGTCAGCATGAAAGTATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295571.9
ENST00000383701.8
CDS-3UTR CCA 90 bp TTTTTCAGAAGTCAATGCCTTGCTGATGCAAAGCGCAACATGCTTTTGTCATCCAAAATCAACTGGGCGTaGTGGTGCACGCCTGTAATC +
Preference number: 4 (lower is better)
Translates to: FFRSQCLADAKRNMLLSSKINWA*WCTPVI
Trigger: GATTACAGGCGTGCACCACCACGCCCAGTTGATTTT...GGATGACAAAAGCATGTTGCGCTTTGCATCAGCAAGGCATTGACTTCTGAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000615922.1
CDS-3UTR CCA 90 bp ATGTTTCTTCTTAAATGGCCACTTTGGGTGTTGCAATACGTGGTCTGCAGCCTGCTGTGTAGTACATGCTaGGCAAATGCCCTGAATAGT +
Preference number: 4 (lower is better)
Translates to: MFLLKWPLWVLQYVVCSLLCSTC*ANALNS
Trigger: ACTATTCAGGGCATTTGCCCAGCATGTACTACACAG...CAGGCTGCAGACCACGTATTGCAACACCCAAAGTGGCCATTTAAGAAGAAACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403140.6
CDS-3UTR TCA 90 bp GGAAACCAGACAGAAGGTATGCAAGACAGTCCTACAGAATGTTCTAATTTGCTTTCGCCTGGAATGCTGTaGGTATTAGGAGGAGCTTCA +
Preference number: 4 (lower is better)
Translates to: GNQTEGMQDSPTECSNLLSPGML*VLGGAS
Trigger: TGAAGCTCCTCCTAATACTCACAGCATTCCAGGCGA...AAGCAAATTAGAACATTCTGTAGGACTGTCTTGCATACCTTCTGTCTGGTTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295571.9
ENST00000383701.8
CDS-3UTR TCA 90 bp AAAAGTAAATGGGTCAGACCAGCTCCATGCATTCCAATAAATATGTCCGTGTTGTCGCCTGGAATGCTGTaGGTATTAGGAGGAGCTTCA +
Preference number: 4 (lower is better)
Translates to: KSKWVRPAPCIPINMSVLSPGML*VLGGAS
Trigger: TGAAGCTCCTCCTAATACTCACAGCATTCCAGGCGA...CAACACGGACATATTTATTGGAATGCATGGAGCTGGTCTGACCCATTTACTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403140.6
CDS-3UTR TCA 90 bp TTTTTCAGAAGTCAATGCCTTGCTGATGCAAAGCGCAACATGCTTTTGTCATCCAAATATGTCCTCAGCTaGCTCAAGAGTGTCCGTCCA +
Preference number: 4 (lower is better)
Translates to: FFRSQCLADAKRNMLLSSKYVLS*LKSVRP
Trigger: TGGACGGACACTCTTGAGTCAGCTGAGGACATATTT...GGATGACAAAAGCATGTTGCGCTTTGCATCAGCAAGGCATTGACTTCTGAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295571.9
ENST00000383701.8
CDS-3UTR TCA 90 bp TGCTCTCCATGGCTAAGAAGGAATCAGTGGAAACCAGACAGAAGGTATGCAAGACACGTCAGTACTGAATaGGTTATTAACGTGCTGAGT +
Preference number: 4 (lower is better)
Translates to: CSPWLRRNQWKPDRRYARHVSTE*VINVLS
Trigger: ACTCAGCACGTTAATAACTCATTCAGTACTGACGTG...TCTTGCATACCTTCTGTCTGGTTTCCACTGATTCCTTCTTAGCCATGGAGAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295571.9
ENST00000383701.8
CDS-3UTR TCA 90 bp GTGGAAACCAGACAGAAGGTATGCAAGACAGTCCTACAGAATGTTCTAATTTGCTCCGTGCAAGAATGGTaGCTCGAATTTTTCCATCGG +
Preference number: 4 (lower is better)
Translates to: VETRQKVCKTVLQNVLICSVQEW*LEFFHR
Trigger: CCGATGGAAAAATTCGAGTCACCATTCTTGCACGGA...GCAAATTAGAACATTCTGTAGGACTGTCTTGCATACCTTCTGTCTGGTTTCCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000295571.9
CDS-3UTR TCA 90 bp TGTAGTGAACGCCTCTCAGCCTGGCCAAGTCTAAGTAACAGCGTTCATCTTCACTGTGTGATCCTTAGTTaGTCTAAAAACCCAAGTTCT +
Preference number: 4 (lower is better)
Translates to: CSERLSAWPSLSNSVHLHCVILS*SKNPSS
Trigger: AGAACTTGGGTTTTTAGATCAACTAAGGATCACACA...GTGAAGATGAACGCTGTTACTTAGACTTGGCCAGGCTGAGAGGCGTTCACTACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403140.6
CDS-3UTR TCA 90 bp GGTAGACGCACACGCACTGGTATATGCAGTTACAAATACTCGCATAAAATGGAAAAGTCAATGCCTTGCTaGTGCAAAGCGCAACATGCT +
Preference number: 4 (lower is better)
Translates to: GRRTRTGICSYKYSHKMEKSMPC*CKAQHA
Trigger: AGCATGTTGCGCTTTGCATCAGCAAGGCATTGACTT...TTCCATTTTATGCGAGTATTTGTAACTGCATATACCAGTGCGTGTGCGTCTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000615922.1
CDS-3UTR TCA 90 bp TCTTGTGTGATGTTTAGTCTGTGTAGTACATGCTGGGCAAATGCCCTGAATAGTGCTGGGCAAATGCCCTaGATAGTCCAGTATTTTGAC +
Preference number: 4 (lower is better)
Translates to: SCVMFSLCSTCWANALNSAGQMP*IVQYFD
Trigger: GTCAAAATACTGGACTATTCAGGGCATTTGCCCAGC...ACTATTCAGGGCATTTGCCCAGCATGTACTACACAGACTAAACATCACACAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403140.6
CDS-3UTR TCA 90 bp GTGGTCTGCAGCCTGAAGGACAAGATACATAAATTCTTCTACATCGAAAGAGTAATCCGTAAGAACTCATaGCTGCAGAGGGCTTTTGCG +
Preference number: 4 (lower is better)
Translates to: VVCSLKDKIHKFFYIERVIRKNS*LQRAFA
Trigger: CGCAAAAGCCCTCTGCAGTCATGAGTTCTTACGGAT...TACTCTTTCGATGTAGAAGAATTTATGTATCTTGTCCTTCAGGCTGCAGACCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403140.6
CDS-3UTR GCA 90 bp AGTCAATGCCTTGCTGATGCAAAGCGCAACATGCTTTTGTCATCCCTTTCATCTGTATTCTGTGCTCCGTaGAAGAATGGTGACTCGAAT +
Preference number: 4 (lower is better)
Translates to: SQCLADAKRNMLLSSLSSVFCAP*KNGDSN
Trigger: ATTCGAGTCACCATTCTTGCACGGAGCACAGAATAC...AGATGAAAGGGATGACAAAAGCATGTTGCGCTTTGCATCAGCAAGGCATTGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295571.9
ENST00000383701.8
CDS-3UTR GCA 90 bp TATTCTGTGCTCCGTGCAAGAATGGTGACTCGAATTTTTCCATCCTTAGGTCCTAGTCTGTGTAGTACATaGTGGGCAAATGCCCTGAAT +
Preference number: 4 (lower is better)
Translates to: YSVLRARMVTRIFPSLGPSLCST*WANALN
Trigger: ATTCAGGGCATTTGCCCAGCATGTACTACACAGACT...AGGACCTAAGGATGGAAAAATTCGAGTCACCATTCTTGCACGGAGCACAGAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403140.6
CDS-3UTR CCA 90 bp GTGGAAACCAGACAGAAGGTATGCAAGACAGTCCTACAGAATGTTCTAATTTGCCTGGCAAGCGGATGCTaGCATAGTTATACAGAGGTT +
Preference number: 4 (lower is better)
Translates to: VETRQKVCKTVLQNVLICLASGC*HSYTEV
Trigger: AACCTCTGTATAACTATGCCAGCATCCGCTTGCCAG...GCAAATTAGAACATTCTGTAGGACTGTCTTGCATACCTTCTGTCTGGTTTCCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295571.9
ENST00000383701.8
CDS-3UTR CCA 90 bp AAGCTCATTTTGGTTAAGGATTTTCCGGTATTCTGTGCTCCGTGCAAGAATGGTCTGGCAAGCGGATGCTaGCATAGTTATACAGAGGTT +
Preference number: 4 (lower is better)
Translates to: KLILVKDFPVFCAPCKNGLASGC*HSYTEV
Trigger: AACCTCTGTATAACTATGCCAGCATCCGCTTGCCAG...ACCATTCTTGCACGGAGCACAGAATACCGGAAAATCCTTAACCAAAATGAGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403140.6
CDS-3UTR CCA 90 bp TTTTTCAGAAGTCAATGCCTTGCTGATGCAAAGCGCAACATGCTTTTGTCATCCAATACAAAAATCAACTaGGCGTGGTGGTGCACGCCT +
Preference number: 4 (lower is better)
Translates to: FFRSQCLADAKRNMLLSSNTKIN*AWWCTP
Trigger: AGGCGTGCACCACCACGCCCAGTTGATTTTTGTATT...GGATGACAAAAGCATGTTGCGCTTTGCATCAGCAAGGCATTGACTTCTGAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000615922.1
CDS-3UTR CCA 90 bp AAGAATCGCTTGAACCTGGGGAGGCAGAAGTTGCATAAACTGAGATCATGCCACCTAAGAAGGAATCAGTaGAAACCAGACAGAAGGTAT +
Preference number: 4 (lower is better)
Translates to: KNRLNLGRQKLHKLRSCHLRRNQ*KPDRRY
Trigger: ATACCTTCTGTCTGGTTTCCACTGATTCCTTCTTAG...GTGGCATGATCTCAGTTTATGCAACTTCTGCCTCCCCAGGTTCAAGCGATTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295571.9
ENST00000383701.8
CDS-3UTR CCA 90 bp GAAGGAATCAGTGGAAACCAGACAGAAGGTATGCAAGACAGTCCTACAGAATGTCTGTGTAGTACATGCTaGGCAAATGCCCTGAATAGT +
Preference number: 4 (lower is better)
Translates to: EGISGNQTEGMQDSPTECLCSTC*ANALNS
Trigger: ACTATTCAGGGCATTTGCCCAGCATGTACTACACAG...ACATTCTGTAGGACTGTCTTGCATACCTTCTGTCTGGTTTCCACTGATTCCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383701.8
3UTR CAA 72 bp CTCATCATGTTTCTTCTTAAATGGCCACTTTGGGTGTaGCAATACGTGGTCTGCAGCCTGAAGGACAAGATA +
Preference number: 4 (lower is better)
Translates to: LIMFLLKWPLWV*QYVVCSLKDKI
Trigger: TATCTTGTCCTTCAGGCTGCAGACCACGTATTGCAACACCCAAAGTGGCCATTTAAGAAGAAACATGATGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403140.6
CDS-3UTR TCA 90 bp GGTAGACGCACACGCACTGGTATATGCAGTTACAAATACTCGCATAAAATGGAAAACCTGCAAACCTCTTaGATCTTCAGAACCACTCAG +
Preference number: 4 (lower is better)
Translates to: GRRTRTGICSYKYSHKMENLQTS*IFRTTQ
Trigger: CTGAGTGGTTCTGAAGATTCAAGAGGTTTGCAGGTT...TTCCATTTTATGCGAGTATTTGTAACTGCATATACCAGTGCGTGTGCGTCTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295571.9
ENST00000383701.8
CDS-3UTR TCA 90 bp AGTCAATGCCTTGCTGATGCAAAGCGCAACATGCTTTTGTCATCCCTTTCATCTCTCAGTGAGACTTCATaGAGTAAGACTCCAAAGACA +
Preference number: 4 (lower is better)
Translates to: SQCLADAKRNMLLSSLSSLSETS*SKTPKT
Trigger: TGTCTTTGGAGTCTTACTTCATGAAGTCTCACTGAG...AGATGAAAGGGATGACAAAAGCATGTTGCGCTTTGCATCAGCAAGGCATTGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295571.9
ENST00000383701.8
CDS-3UTR TCA 90 bp TATTCTGTGCTCCGTGCAAGAATGGTGACTCGAATTTTTCCATCCTTAGGTCCTCTCAGTGAGACTTCATaGAGTAAGACTCCAAAGACA +
Preference number: 4 (lower is better)
Translates to: YSVLRARMVTRIFPSLGPLSETS*SKTPKT
Trigger: TGTCTTTGGAGTCTTACTTCATGAAGTCTCACTGAG...AGGACCTAAGGATGGAAAAATTCGAGTCACCATTCTTGCACGGAGCACAGAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403140.6
CDS-3UTR TCA 90 bp AAGGAATCAGTGGAAACCAGACAGAAGGTATGCAAGACAGTCCTACAGAATGTTACGTGGTCTGCAGCCTaGAGGACAAGATACATAAAT +
Preference number: 4 (lower is better)
Translates to: KESVETRQKVCKTVLQNVTWSAA*RTRYIN
Trigger: ATTTATGTATCTTGTCCTTCAGGCTGCAGACCACGT...AACATTCTGTAGGACTGTCTTGCATACCTTCTGTCTGGTTTCCACTGATTCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295571.9
ENST00000383701.8
CDS-3UTR TCA 90 bp GGTAGACGCACACGCACTGGTATATGCAGTTACAAATACTCGCATAAAATGGAAAGAAGTTGCATAAACTaGGATCATGCCACTGCACTC +
Preference number: 4 (lower is better)
Translates to: GRRTRTGICSYKYSHKMERSCIN*DHATAL
Trigger: GAGTGCAGTGGCATGATCTCAGTTTATGCAACTTCT...TTCCATTTTATGCGAGTATTTGTAACTGCATATACCAGTGCGTGTGCGTCTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295571.9
ENST00000383701.8
CDS-3UTR TCA 90 bp ATGTTTCTTCTTAAATGGCCACTTTGGGTGTTGCAATACGTGGTCTGCAGCCTGAATAGTCCAGTATTTTaGCAGCCAGATATCAGAGGA +
Preference number: 4 (lower is better)
Translates to: MFLLKWPLWVLQYVVCSLNSPVF*QPDIRG
Trigger: TCCTCTGATATCTGGCTGTCAAAATACTGGACTATT...CAGGCTGCAGACCACGTATTGCAACACCCAAAGTGGCCATTTAAGAAGAAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403140.6
CDS-3UTR GCA 90 bp GGAAACCAGACAGAAGGTATGCAAGACAGTCCTACAGAATGTTCTAATTTGCTTAAAAAGAAGGGAATGTaGTCCTCTGGCAAGCGGATG +
Preference number: 4 (lower is better)
Translates to: GNQTEGMQDSPTECSNLLKKKGM*SSGKRM
Trigger: CATCCGCTTGCCAGAGGAGCACATTCCCTTCTTTTT...AAGCAAATTAGAACATTCTGTAGGACTGTCTTGCATACCTTCTGTCTGGTTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295571.9
ENST00000383701.8
CDS-3UTR GCA 90 bp TTTTTCAGAAGTCAATGCCTTGCTGATGCAAAGCGCAACATGCTTTTGTCATCCAGAGATTGGTTGCTCTaGAGTACTGAAGATAACGGG +
Preference number: 4 (lower is better)
Translates to: FFRSQCLADAKRNMLLSSRDWLL*STEDNG
Trigger: CCCGTTATCTTCAGTACTGCAGAGCAACCAATCTCT...GGATGACAAAAGCATGTTGCGCTTTGCATCAGCAAGGCATTGACTTCTGAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295571.9
ENST00000383701.8
CDS-3UTR GCA 90 bp GTGGAAACCAGACAGAAGGTATGCAAGACAGTCCTACAGAATGTTCTAATTTGCAGAGATTGGTTGCTCTaGAGTACTGAAGATAACGGG +
Preference number: 4 (lower is better)
Translates to: VETRQKVCKTVLQNVLICRDWLL*STEDNG
Trigger: CCCGTTATCTTCAGTACTGCAGAGCAACCAATCTCT...GCAAATTAGAACATTCTGTAGGACTGTCTTGCATACCTTCTGTCTGGTTTCCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295571.9
ENST00000383701.8
CDS-3UTR GCA 90 bp AAGAATCGCTTGAACCTGGGGAGGCAGAAGTTGCATAAACTGAGATCATGCCACAAGATAGAGATTGGTTaGTCTGCAGTACTGAAGATA +
Preference number: 4 (lower is better)
Translates to: KNRLNLGRQKLHKLRSCHKIEIG*SAVLKI
Trigger: TATCTTCAGTACTGCAGAGCAACCAATCTCTATCTT...GTGGCATGATCTCAGTTTATGCAACTTCTGCCTCCCCAGGTTCAAGCGATTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000403140.6
CDS-3UTR GCA 90 bp GAAGGAATCAGTGGAAACCAGACAGAAGGTATGCAAGACAGTCCTACAGAATGTATGTCAAGTTTACAGTaGCCTCCAATTTCACCACTC +
Preference number: 4 (lower is better)
Translates to: EGISGNQTEGMQDSPTECMSSLQ*PPISPL
Trigger: GAGTGGTGAAATTGGAGGGCACTGTAAACTTGACAT...ACATTCTGTAGGACTGTCTTGCATACCTTCTGTCTGGTTTCCACTGATTCCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295571.9
ENST00000383701.8
CDS-3UTR GCA 90 bp TCTTGTGTGATGTTTAGTCTGTGTAGTACATGCTGGGCAAATGCCCTGAATAGTGTATTCTGTGCTCCGTaGAAGAATGGTGACTCGAAT +
Preference number: 4 (lower is better)
Translates to: SCVMFSLCSTCWANALNSVFCAP*KNGDSN
Trigger: ATTCGAGTCACCATTCTTGCACGGAGCACAGAATAC...ACTATTCAGGGCATTTGCCCAGCATGTACTACACAGACTAAACATCACACAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403140.6
CDS-3UTR GCA 90 bp AGTCAATGCCTTGCTGATGCAAAGCGCAACATGCTTTTGTCATCCCTTTCATCTACCAGACAGAAGGTATaGAAGACAGTCCTACAGAAT +
Preference number: 4 (lower is better)
Translates to: SQCLADAKRNMLLSSLSSTRQKV*KTVLQN
Trigger: ATTCTGTAGGACTGTCTTGCATACCTTCTGTCTGGT...AGATGAAAGGGATGACAAAAGCATGTTGCGCTTTGCATCAGCAAGGCATTGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000615922.1
CDS-3UTR GCA 90 bp GTGGAAACCAGACAGAAGGTATGCAAGACAGTCCTACAGAATGTTCTAATTTGCAGTCTGTGTAGTACATaGTGGGCAAATGCCCTGAAT +
Preference number: 4 (lower is better)
Translates to: VETRQKVCKTVLQNVLICSLCST*WANALN
Trigger: ATTCAGGGCATTTGCCCAGCATGTACTACACAGACT...GCAAATTAGAACATTCTGTAGGACTGTCTTGCATACCTTCTGTCTGGTTTCCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383701.8
CDS-3UTR CCA 90 bp GTGGAAACCAGACAGAAGGTATGCAAGACAGTCCTACAGAATGTTCTAATTTGCATACAGAGGTTCGCCTaGAATGCTGTGAGTATTAGG +
Preference number: 4 (lower is better)
Translates to: VETRQKVCKTVLQNVLICIQRFA*NAVSIR
Trigger: CCTAATACTCACAGCATTCCAGGCGAACCTCTGTAT...GCAAATTAGAACATTCTGTAGGACTGTCTTGCATACCTTCTGTCTGGTTTCCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295571.9
ENST00000383701.8
CDS-3UTR CCA 90 bp AAGCTCATTTTGGTTAAGGATTTTCCGGTATTCTGTGCTCCGTGCAAGAATGGTATACAGAGGTTCGCCTaGAATGCTGTGAGTATTAGG +
Preference number: 4 (lower is better)
Translates to: KLILVKDFPVFCAPCKNGIQRFA*NAVSIR
Trigger: CCTAATACTCACAGCATTCCAGGCGAACCTCTGTAT...ACCATTCTTGCACGGAGCACAGAATACCGGAAAATCCTTAACCAAAATGAGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403140.6
CDS-3UTR CCA 90 bp GAATACTTTCATGCTGACAGAGGTAGACGCACACGCACTGGTATATGCAGTTACACCAAACCTGAACTCTaGTTTGCAGGATTTCTCATA +
Preference number: 4 (lower is better)
Translates to: EYFHADRGRRTRTGICSYTKPEL*FAGFLI
Trigger: TATGAGAAATCCTGCAAACCAGAGTTCAGGTTTGGT...GTAACTGCATATACCAGTGCGTGTGCGTCTACCTCTGTCAGCATGAAAGTATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295571.9
ENST00000383701.8
CDS-3UTR CCA 90 bp AAGAATCGCTTGAACCTGGGGAGGCAGAAGTTGCATAAACTGAGATCATGCCACCCAATTTCACCACTCTaGAAAAAGTCCTCCTTAAAT +
Preference number: 4 (lower is better)
Translates to: KNRLNLGRQKLHKLRSCHPISPL*KKSSLN
Trigger: ATTTAAGGAGGACTTTTTCCAGAGTGGTGAAATTGG...GTGGCATGATCTCAGTTTATGCAACTTCTGCCTCCCCAGGTTCAAGCGATTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000403140.6
CDS-3UTR CCA 90 bp AAGCTCATTTTGGTTAAGGATTTTCCGGTATTCTGTGCTCCGTGCAAGAATGGTCTTAAATGGCCACTTTaGGTGTTGCAATACGTGGTC +
Preference number: 4 (lower is better)
Translates to: KLILVKDFPVFCAPCKNGLKWPL*VLQYVV
Trigger: GACCACGTATTGCAACACCCAAAGTGGCCATTTAAG...ACCATTCTTGCACGGAGCACAGAATACCGGAAAATCCTTAACCAAAATGAGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403140.6
CDS-3UTR CCA 90 bp TTTTTCAGAAGTCAATGCCTTGCTGATGCAAAGCGCAACATGCTTTTGTCATCCCATATCCGTAAGAACTaGTGTCCCACATCACGATGT +
Preference number: 4 (lower is better)
Translates to: FFRSQCLADAKRNMLLSSHIRKN*CPTSRC
Trigger: ACATCGTGATGTGGGACACCAGTTCTTACGGATATG...GGATGACAAAAGCATGTTGCGCTTTGCATCAGCAAGGCATTGACTTCTGAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000383701.8
CDS-3UTR TCA 90 bp GTGGTCTGCAGCCTGAAGGACAAGATACATAAATTCTTCTACATCGAAAGAGTAAACCTGCAAACCTCTTaGATCTTCAGAACCACTCAG +
Preference number: 4 (lower is better)
Translates to: VVCSLKDKIHKFFYIERVNLQTS*IFRTTQ
Trigger: CTGAGTGGTTCTGAAGATTCAAGAGGTTTGCAGGTT...TACTCTTTCGATGTAGAAGAATTTATGTATCTTGTCCTTCAGGCTGCAGACCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403140.6
CDS-3UTR TCA 90 bp CACAAATGCTCTCCATGGCTAAGAAGGAATCAGTGGAAACCAGACAGAAGGTATAAATCACAGAAGTGGTaGTACATGTTAACACCTGCA +
Preference number: 4 (lower is better)
Translates to: HKCSPWLRRNQWKPDRRYKSQKW*YMLTPA
Trigger: TGCAGGTGTTAACATGTATCACCACTTCTGTGATTT...ATACCTTCTGTCTGGTTTCCACTGATTCCTTCTTAGCCATGGAGAGCATTTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295571.9
ENST00000383701.8
CDS-3UTR TCA 90 bp TTTTTCAGAAGTCAATGCCTTGCTGATGCAAAGCGCAACATGCTTTTGTCATCCGAGGTGACTAAACGCTaGTCTATAACATGGTCCTAT +
Preference number: 4 (lower is better)
Translates to: FFRSQCLADAKRNMLLSSEVTKR*SITWSY
Trigger: ATAGGACCATGTTATAGATCAGCGTTTAGTCACCTC...GGATGACAAAAGCATGTTGCGCTTTGCATCAGCAAGGCATTGACTTCTGAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000615922.1
CDS-3UTR TCA 90 bp AAGGAATCAGTGGAAACCAGACAGAAGGTATGCAAGACAGTCCTACAGAATGTTGAGGTGACTAAACGCTaGTCTATAACATGGTCCTAT +
Preference number: 4 (lower is better)
Translates to: KESVETRQKVCKTVLQNVEVTKR*SITWSY
Trigger: ATAGGACCATGTTATAGATCAGCGTTTAGTCACCTC...AACATTCTGTAGGACTGTCTTGCATACCTTCTGTCTGGTTTCCACTGATTCCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000615922.1
CDS-3UTR TCA 90 bp GGTAGACGCACACGCACTGGTATATGCAGTTACAAATACTCGCATAAAATGGAAGAGGTGACTAAACGCTaGTCTATAACATGGTCCTAT +
Preference number: 4 (lower is better)
Translates to: GRRTRTGICSYKYSHKMEEVTKR*SITWSY
Trigger: ATAGGACCATGTTATAGATCAGCGTTTAGTCACCTC...TTCCATTTTATGCGAGTATTTGTAACTGCATATACCAGTGCGTGTGCGTCTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000615922.1
CDS-3UTR TCA 90 bp TGCTCTCCATGGCTAAGAAGGAATCAGTGGAAACCAGACAGAAGGTATGCAAGATGTGATTTTAAGGTCTaGATCAAAGCCATTGCTACA +
Preference number: 4 (lower is better)
Translates to: CSPWLRRNQWKPDRRYARCDFKV*IKAIAT
Trigger: TGTAGCAATGGCTTTGATTCAGACCTTAAAATCACA...TCTTGCATACCTTCTGTCTGGTTTCCACTGATTCCTTCTTAGCCATGGAGAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000615922.1
CDS-3UTR TCA 90 bp GAATACTTTCATGCTGACAGAGGTAGACGCACACGCACTGGTATATGCAGTTACTGTGATTTTAAGGTCTaGATCAAAGCCATTGCTACA +
Preference number: 4 (lower is better)
Translates to: EYFHADRGRRTRTGICSYCDFKV*IKAIAT
Trigger: TGTAGCAATGGCTTTGATTCAGACCTTAAAATCACA...GTAACTGCATATACCAGTGCGTGTGCGTCTACCTCTGTCAGCATGAAAGTATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000615922.1
CDS-3UTR TCA 90 bp AGTCAATGCCTTGCTGATGCAAAGCGCAACATGCTTTTGTCATCCCTTTCATCTAATAGTCCAGTATTTTaGCAGCCAGATATCAGAGGA +
Preference number: 4 (lower is better)
Translates to: SQCLADAKRNMLLSSLSSNSPVF*QPDIRG
Trigger: TCCTCTGATATCTGGCTGTCAAAATACTGGACTATT...AGATGAAAGGGATGACAAAAGCATGTTGCGCTTTGCATCAGCAAGGCATTGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383701.8
CDS-3UTR GCA 90 bp CACAAATGCTCTCCATGGCTAAGAAGGAATCAGTGGAAACCAGACAGAAGGTATCAGACAGTGGCAATATaGCTATTGTTGTGCAAAAAG +
Preference number: 4 (lower is better)
Translates to: HKCSPWLRRNQWKPDRRYQTVAI*LLLCKK
Trigger: CTTTTTGCACAACAATAGGCATATTGCCACTGTCTG...ATACCTTCTGTCTGGTTTCCACTGATTCCTTCTTAGCCATGGAGAGCATTTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295571.9
ENST00000383701.8
CDS-3UTR GCA 90 bp AAGGAATCAGTGGAAACCAGACAGAAGGTATGCAAGACAGTCCTACAGAATGTTGTCAGACCAGCTCCATaGATTCCAATAAATATGTCC +
Preference number: 4 (lower is better)
Translates to: KESVETRQKVCKTVLQNVVRPAP*IPINMS
Trigger: GGACATATTTATTGGAATGCATGGAGCTGGTCTGAC...AACATTCTGTAGGACTGTCTTGCATACCTTCTGTCTGGTTTCCACTGATTCCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295571.9
ENST00000383701.8
CDS-3UTR GCA 90 bp GGTAGACGCACACGCACTGGTATATGCAGTTACAAATACTCGCATAAAATGGAAGTCAGACCAGCTCCATaGATTCCAATAAATATGTCC +
Preference number: 4 (lower is better)
Translates to: GRRTRTGICSYKYSHKMEVRPAP*IPINMS
Trigger: GGACATATTTATTGGAATGCATGGAGCTGGTCTGAC...TTCCATTTTATGCGAGTATTTGTAACTGCATATACCAGTGCGTGTGCGTCTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295571.9
ENST00000383701.8
CDS-3UTR GCA 90 bp AGTCAATGCCTTGCTGATGCAAAGCGCAACATGCTTTTGTCATCCCTTTCATCTATGCAAAGCGCAACATaGTTTTGTCATCCCTTTCAT +
Preference number: 4 (lower is better)
Translates to: SQCLADAKRNMLLSSLSSMQSAT*FCHPFH
Trigger: ATGAAAGGGATGACAAAAGCATGTTGCGCTTTGCAT...AGATGAAAGGGATGACAAAAGCATGTTGCGCTTTGCATCAGCAAGGCATTGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000615922.1
CDS-3UTR GCA 90 bp GAAGGAATCAGTGGAAACCAGACAGAAGGTATGCAAGACAGTCCTACAGAATGTATGCAAAGCGCAACATaGTTTTGTCATCCCTTTCAT +
Preference number: 4 (lower is better)
Translates to: EGISGNQTEGMQDSPTECMQSAT*FCHPFH
Trigger: ATGAAAGGGATGACAAAAGCATGTTGCGCTTTGCAT...ACATTCTGTAGGACTGTCTTGCATACCTTCTGTCTGGTTTCCACTGATTCCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000615922.1
CDS-3UTR GCA 90 bp GTGGAAACCAGACAGAAGGTATGCAAGACAGTCCTACAGAATGTTCTAATTTGCTTTTTCAGAAGTCAATaGCTTGCTGATGCAAAGCGC +
Preference number: 4 (lower is better)
Translates to: VETRQKVCKTVLQNVLICFFRSQ*LADAKR
Trigger: GCGCTTTGCATCAGCAAGGCATTGACTTCTGAAAAA...GCAAATTAGAACATTCTGTAGGACTGTCTTGCATACCTTCTGTCTGGTTTCCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000615922.1
CDS-3UTR GCA 90 bp GGTAGACGCACACGCACTGGTATATGCAGTTACAAATACTCGCATAAAATGGAATTTTTCAGAAGTCAATaGCTTGCTGATGCAAAGCGC +
Preference number: 4 (lower is better)
Translates to: GRRTRTGICSYKYSHKMEFFRSQ*LADAKR
Trigger: GCGCTTTGCATCAGCAAGGCATTGACTTCTGAAAAA...TTCCATTTTATGCGAGTATTTGTAACTGCATATACCAGTGCGTGTGCGTCTACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000615922.1
CDS-3UTR GCA 90 bp CTGACAGAGGTAGACGCACACGCACTGGTATATGCAGTTACAAATACTCGCATAGTCATAATCAGTAAATaGATTCCATGTGTCGGAGAA +
Preference number: 4 (lower is better)
Translates to: LTEVDAHALVYAVTNTRIVIISK*IPCVGE
Trigger: TTCTCCGACACATGGAATGCATTTACTGATTATGAC...TATGCGAGTATTTGTAACTGCATATACCAGTGCGTGTGCGTCTACCTCTGTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383701.8
CDS-3UTR CCA 90 bp TATTCTGTGCTCCGTGCAAGAATGGTGACTCGAATTTTTCCATCCTTAGGTCCTACCAAACCTGAACTCTaGTTTGCAGGATTTCTCATA +
Preference number: 4 (lower is better)
Translates to: YSVLRARMVTRIFPSLGPTKPEL*FAGFLI
Trigger: TATGAGAAATCCTGCAAACCAGAGTTCAGGTTTGGT...AGGACCTAAGGATGGAAAAATTCGAGTCACCATTCTTGCACGGAGCACAGAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403140.6
CDS-3UTR CCA 90 bp TGCTCTCCATGGCTAAGAAGGAATCAGTGGAAACCAGACAGAAGGTATGCAAGAAATCAAGATAGAGATTaGTTGCTCTGCAGTACTGAA +
Preference number: 4 (lower is better)
Translates to: CSPWLRRNQWKPDRRYARNQDRD*LLCSTE
Trigger: TTCAGTACTGCAGAGCAACCAATCTCTATCTTGATT...TCTTGCATACCTTCTGTCTGGTTTCCACTGATTCCTTCTTAGCCATGGAGAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295571.9
ENST00000383701.8
CDS-3UTR CCA 90 bp ATGTTTCTTCTTAAATGGCCACTTTGGGTGTTGCAATACGTGGTCTGCAGCCTGCCAATTTCACCACTCTaGAAAAAGTCCTCCTTAAAT +
Preference number: 4 (lower is better)
Translates to: MFLLKWPLWVLQYVVCSLPISPL*KKSSLN
Trigger: ATTTAAGGAGGACTTTTTCCAGAGTGGTGAAATTGG...CAGGCTGCAGACCACGTATTGCAACACCCAAAGTGGCCATTTAAGAAGAAACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403140.6
CDS-3UTR TCA 90 bp TTTTTCAGAAGTCAATGCCTTGCTGATGCAAAGCGCAACATGCTTTTGTCATCCAAATCACAGAAGTGGTaGTACATGTTAACACCTGCA +
Preference number: 4 (lower is better)
Translates to: FFRSQCLADAKRNMLLSSKSQKW*YMLTPA
Trigger: TGCAGGTGTTAACATGTATCACCACTTCTGTGATTT...GGATGACAAAAGCATGTTGCGCTTTGCATCAGCAAGGCATTGACTTCTGAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295571.9
ENST00000383701.8
CDS-3UTR TCA 90 bp GGAAACCAGACAGAAGGTATGCAAGACAGTCCTACAGAATGTTCTAATTTGCTTCACGTCAGTACTGAATaGGTTATTAACGTGCTGAGT +
Preference number: 4 (lower is better)
Translates to: GNQTEGMQDSPTECSNLLHVSTE*VINVLS
Trigger: ACTCAGCACGTTAATAACTCATTCAGTACTGACGTG...AAGCAAATTAGAACATTCTGTAGGACTGTCTTGCATACCTTCTGTCTGGTTTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295571.9
ENST00000383701.8
CDS-3UTR TCA 90 bp TTTTTCAGAAGTCAATGCCTTGCTGATGCAAAGCGCAACATGCTTTTGTCATCCTGTCCGTGTTGTGTGTaGTCCTTAGTTGATCTAAAA +
Preference number: 4 (lower is better)
Translates to: FFRSQCLADAKRNMLLSSCPCCV*SLVDLK
Trigger: TTTTAGATCAACTAAGGATCACACACAACACGGACA...GGATGACAAAAGCATGTTGCGCTTTGCATCAGCAAGGCATTGACTTCTGAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295571.9
ENST00000383701.8
CDS-3UTR GCA 90 bp AGTCAATGCCTTGCTGATGCAAAGCGCAACATGCTTTTGTCATCCCTTTCATCTAAGATAGAGATTGGTTaGTCTGCAGTACTGAAGATA +
Preference number: 4 (lower is better)
Translates to: SQCLADAKRNMLLSSLSSKIEIG*SAVLKI
Trigger: TATCTTCAGTACTGCAGAGCAACCAATCTCTATCTT...AGATGAAAGGGATGACAAAAGCATGTTGCGCTTTGCATCAGCAAGGCATTGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295571.9
ENST00000383701.8
CDS-3UTR GCA 90 bp GTGGTCTGCAGCCTGAAGGACAAGATACATAAATTCTTCTACATCGAAAGAGTAGTCAGACCAGCTCCATaGATTCCAATAAATATGTCC +
Preference number: 4 (lower is better)
Translates to: VVCSLKDKIHKFFYIERVVRPAP*IPINMS
Trigger: GGACATATTTATTGGAATGCATGGAGCTGGTCTGAC...TACTCTTTCGATGTAGAAGAATTTATGTATCTTGTCCTTCAGGCTGCAGACCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403140.6
CDS-3UTR GCA 90 bp GGAAACCAGACAGAAGGTATGCAAGACAGTCCTACAGAATGTTCTAATTTGCTTACCAGACAGAAGGTATaGAAGACAGTCCTACAGAAT +
Preference number: 4 (lower is better)
Translates to: GNQTEGMQDSPTECSNLLTRQKV*KTVLQN
Trigger: ATTCTGTAGGACTGTCTTGCATACCTTCTGTCTGGT...AAGCAAATTAGAACATTCTGTAGGACTGTCTTGCATACCTTCTGTCTGGTTTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000615922.1
CDS-3UTR GCA 90 bp GGTAGACGCACACGCACTGGTATATGCAGTTACAAATACTCGCATAAAATGGAAACACGCACTGGTATATaGAGTTACAAATACTCGCAT +
Preference number: 4 (lower is better)
Translates to: GRRTRTGICSYKYSHKMETRTGI*SYKYSH
Trigger: ATGCGAGTATTTGTAACTGCATATACCAGTGCGTGT...TTCCATTTTATGCGAGTATTTGTAACTGCATATACCAGTGCGTGTGCGTCTACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000615922.1
CDS-3UTR GCA 90 bp GTGGAAACCAGACAGAAGGTATGCAAGACAGTCCTACAGAATGTTCTAATTTGCACACGCACTGGTATATaGAGTTACAAATACTCGCAT +
Preference number: 4 (lower is better)
Translates to: VETRQKVCKTVLQNVLICTRTGI*SYKYSH
Trigger: ATGCGAGTATTTGTAACTGCATATACCAGTGCGTGT...GCAAATTAGAACATTCTGTAGGACTGTCTTGCATACCTTCTGTCTGGTTTCCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000615922.1
CDS-3UTR GCA 90 bp CTGACAGAGGTAGACGCACACGCACTGGTATATGCAGTTACAAATACTCGCATACTGAATCAAAGCCATTaGTACAGTGATTCACTATTT +
Preference number: 4 (lower is better)
Translates to: LTEVDAHALVYAVTNTRILNQSH*YSDSLF
Trigger: AAATAGTGAATCACTGTAGCAATGGCTTTGATTCAG...TATGCGAGTATTTGTAACTGCATATACCAGTGCGTGTGCGTCTACCTCTGTCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000615922.1
CDS-3UTR GCA 90 bp AAGGAATCAGTGGAAACCAGACAGAAGGTATGCAAGACAGTCCTACAGAATGTTATGCAAAGCGCAACATaGTTTTGTCATCCCTTTCAT +
Preference number: 4 (lower is better)
Translates to: KESVETRQKVCKTVLQNVMQSAT*FCHPFH
Trigger: ATGAAAGGGATGACAAAAGCATGTTGCGCTTTGCAT...AACATTCTGTAGGACTGTCTTGCATACCTTCTGTCTGGTTTCCACTGATTCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000615922.1
CDS-3UTR CCA 90 bp GTGGAAACCAGACAGAAGGTATGCAAGACAGTCCTACAGAATGTTCTAATTTGCACCAAACCTGAACTCTaGTTTGCAGGATTTCTCATA +
Preference number: 4 (lower is better)
Translates to: VETRQKVCKTVLQNVLICTKPEL*FAGFLI
Trigger: TATGAGAAATCCTGCAAACCAGAGTTCAGGTTTGGT...GCAAATTAGAACATTCTGTAGGACTGTCTTGCATACCTTCTGTCTGGTTTCCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295571.9
ENST00000383701.8
CDS-3UTR CCA 90 bp AGTCAATGCCTTGCTGATGCAAAGCGCAACATGCTTTTGTCATCCCTTTCATCTATGTTTCTTCTTAAATaGCCACTTTGGGTGTTGCAA +
Preference number: 4 (lower is better)
Translates to: SQCLADAKRNMLLSSLSSMFLLK*PLWVLQ
Trigger: TTGCAACACCCAAAGTGGCCATTTAAGAAGAAACAT...AGATGAAAGGGATGACAAAAGCATGTTGCGCTTTGCATCAGCAAGGCATTGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295571.9
ENST00000383701.8
CDS-3UTR CCA 90 bp AAGGAATCAGTGGAAACCAGACAGAAGGTATGCAAGACAGTCCTACAGAATGTTCTAAGAAGGAATCAGTaGAAACCAGACAGAAGGTAT +
Preference number: 4 (lower is better)
Translates to: KESVETRQKVCKTVLQNVLRRNQ*KPDRRY
Trigger: ATACCTTCTGTCTGGTTTCCACTGATTCCTTCTTAG...AACATTCTGTAGGACTGTCTTGCATACCTTCTGTCTGGTTTCCACTGATTCCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000615922.1
CDS-3UTR CCA 90 bp GTGGAAACCAGACAGAAGGTATGCAAGACAGTCCTACAGAATGTTCTAATTTGCCTAAGAAGGAATCAGTaGAAACCAGACAGAAGGTAT +
Preference number: 4 (lower is better)
Translates to: VETRQKVCKTVLQNVLICLRRNQ*KPDRRY
Trigger: ATACCTTCTGTCTGGTTTCCACTGATTCCTTCTTAG...GCAAATTAGAACATTCTGTAGGACTGTCTTGCATACCTTCTGTCTGGTTTCCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000615922.1
CDS-3UTR TCA 90 bp GTGGTCTGCAGCCTGAAGGACAAGATACATAAATTCTTCTACATCGAAAGAGTATGTCCGTGTTGTGTGTaGTCCTTAGTTGATCTAAAA +
Preference number: 4 (lower is better)
Translates to: VVCSLKDKIHKFFYIERVCPCCV*SLVDLK
Trigger: TTTTAGATCAACTAAGGATCACACACAACACGGACA...TACTCTTTCGATGTAGAAGAATTTATGTATCTTGTCCTTCAGGCTGCAGACCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403140.6
CDS-3UTR TCA 90 bp AAGGAATCAGTGGAAACCAGACAGAAGGTATGCAAGACAGTCCTACAGAATGTTTGTGATTTTAAGGTCTaGATCAAAGCCATTGCTACA +
Preference number: 4 (lower is better)
Translates to: KESVETRQKVCKTVLQNVCDFKV*IKAIAT
Trigger: TGTAGCAATGGCTTTGATTCAGACCTTAAAATCACA...AACATTCTGTAGGACTGTCTTGCATACCTTCTGTCTGGTTTCCACTGATTCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000615922.1
CDS-3UTR GCA 90 bp GAAGGAATCAGTGGAAACCAGACAGAAGGTATGCAAGACAGTCCTACAGAATGTATTAACATAGCAACCTaGAAACCTCTTGAATCTTCA +
Preference number: 4 (lower is better)
Translates to: EGISGNQTEGMQDSPTECINIAT*KPLESS
Trigger: TGAAGATTCAAGAGGTTTGCAGGTTGCTATGTTAAT...ACATTCTGTAGGACTGTCTTGCATACCTTCTGTCTGGTTTCCACTGATTCCTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295571.9
ENST00000383701.8
CDS-3UTR GCA 90 bp CACAAATGCTCTCCATGGCTAAGAAGGAATCAGTGGAAACCAGACAGAAGGTATTTAATTAATCACAAATaGTCTCCATGGCTAAGAAGG +
Preference number: 4 (lower is better)
Translates to: HKCSPWLRRNQWKPDRRYLINHK*SPWLRR
Trigger: CCTTCTTAGCCATGGAGAGCATTTGTGATTAATTAA...ATACCTTCTGTCTGGTTTCCACTGATTCCTTCTTAGCCATGGAGAGCATTTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000615922.1
CDS-3UTR GCA 90 bp GGAAACCAGACAGAAGGTATGCAAGACAGTCCTACAGAATGTTCTAATTTGCTTACACGCACTGGTATATaGAGTTACAAATACTCGCAT +
Preference number: 4 (lower is better)
Translates to: GNQTEGMQDSPTECSNLLTRTGI*SYKYSH
Trigger: ATGCGAGTATTTGTAACTGCATATACCAGTGCGTGT...AAGCAAATTAGAACATTCTGTAGGACTGTCTTGCATACCTTCTGTCTGGTTTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000615922.1
CDS-3UTR GCA 90 bp AGTCAATGCCTTGCTGATGCAAAGCGCAACATGCTTTTGTCATCCCTTTCATCTCTGAATCAAAGCCATTaGTACAGTGATTCACTATTT +
Preference number: 4 (lower is better)
Translates to: SQCLADAKRNMLLSSLSSLNQSH*YSDSLF
Trigger: AAATAGTGAATCACTGTAGCAATGGCTTTGATTCAG...AGATGAAAGGGATGACAAAAGCATGTTGCGCTTTGCATCAGCAAGGCATTGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000615922.1
CDS-3UTR GCA 90 bp TTTCCATCCTTAGGTCCTTCTTGTGTGATGTTTAGTCTGTGTAGTACATGCTGGGTCATAATCAGTAAATaGATTCCATGTGTCGGAGAA +
Preference number: 4 (lower is better)
Translates to: FPSLGPSCVMFSLCSTCWVIISK*IPCVGE
Trigger: TTCTCCGACACATGGAATGCATTTACTGATTATGAC...CCAGCATGTACTACACAGACTAAACATCACACAAGAAGGACCTAAGGATGGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403140.6
CDS-3UTR CCA 90 bp GTGGAAACCAGACAGAAGGTATGCAAGACAGTCCTACAGAATGTTCTAATTTGCAATCAAGATAGAGATTaGTTGCTCTGCAGTACTGAA +
Preference number: 4 (lower is better)
Translates to: VETRQKVCKTVLQNVLICNQDRD*LLCSTE
Trigger: TTCAGTACTGCAGAGCAACCAATCTCTATCTTGATT...GCAAATTAGAACATTCTGTAGGACTGTCTTGCATACCTTCTGTCTGGTTTCCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295571.9
ENST00000383701.8
CDS-3UTR CCA 90 bp AAGCTCATTTTGGTTAAGGATTTTCCGGTATTCTGTGCTCCGTGCAAGAATGGTAATCAAGATAGAGATTaGTTGCTCTGCAGTACTGAA +
Preference number: 4 (lower is better)
Translates to: KLILVKDFPVFCAPCKNGNQDRD*LLCSTE
Trigger: TTCAGTACTGCAGAGCAACCAATCTCTATCTTGATT...ACCATTCTTGCACGGAGCACAGAATACCGGAAAATCCTTAACCAAAATGAGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403140.6
CDS-3UTR CCA 90 bp TCTTGTGTGATGTTTAGTCTGTGTAGTACATGCTGGGCAAATGCCCTGAATAGTATGTTTCTTCTTAAATaGCCACTTTGGGTGTTGCAA +
Preference number: 4 (lower is better)
Translates to: SCVMFSLCSTCWANALNSMFLLK*PLWVLQ
Trigger: TTGCAACACCCAAAGTGGCCATTTAAGAAGAAACAT...ACTATTCAGGGCATTTGCCCAGCATGTACTACACAGACTAAACATCACACAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403140.6
CDS-3UTR GCA 90 bp GTGGAAACCAGACAGAAGGTATGCAAGACAGTCCTACAGAATGTTCTAATTTGCATTAACATAGCAACCTaGAAACCTCTTGAATCTTCA +
Preference number: 4 (lower is better)
Translates to: VETRQKVCKTVLQNVLICINIAT*KPLESS
Trigger: TGAAGATTCAAGAGGTTTGCAGGTTGCTATGTTAAT...GCAAATTAGAACATTCTGTAGGACTGTCTTGCATACCTTCTGTCTGGTTTCCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295571.9
ENST00000383701.8
CDS-3UTR GCA 90 bp GGAAACCAGACAGAAGGTATGCAAGACAGTCCTACAGAATGTTCTAATTTGCTTTTAATTAATCACAAATaGTCTCCATGGCTAAGAAGG +
Preference number: 4 (lower is better)
Translates to: GNQTEGMQDSPTECSNLLLINHK*SPWLRR
Trigger: CCTTCTTAGCCATGGAGAGCATTTGTGATTAATTAA...AAGCAAATTAGAACATTCTGTAGGACTGTCTTGCATACCTTCTGTCTGGTTTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000615922.1
CDS-3UTR GCA 90 bp GGAAACCAGACAGAAGGTATGCAAGACAGTCCTACAGAATGTTCTAATTTGCTTCTGAATCAAAGCCATTaGTACAGTGATTCACTATTT +
Preference number: 4 (lower is better)
Translates to: GNQTEGMQDSPTECSNLLLNQSH*YSDSLF
Trigger: AAATAGTGAATCACTGTAGCAATGGCTTTGATTCAG...AAGCAAATTAGAACATTCTGTAGGACTGTCTTGCATACCTTCTGTCTGGTTTCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000615922.1
CDS GCA 90 bp GTGGCTGCTGGGCCTGGCACAAAGCCTTCCTGGTGTCGGTCGTCCTaGAAGGCCCGCCGGGATGGGTGGCTGCACTCCTCCAGCACACGG +
Preference number: 5 (lower is better)
Translates to: VAAGPGTKPSWCRSS*KARRDGWLHSSSTR
Trigger: CCGTGTGCTGGAGGAGTGCAGCCACCCATCCCGGCGGGCCTTGCAGGACGACCGACACCAGGAAGGCTTTGTGCCAGGCCCAGCAGCCAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000403140.6
ENST00000424374.5
ENST00000456376.2
CDS CCA 90 bp AAGCCTTCCTGGTGTCGGTCGTCCTGCAAGGCCCGCCGGGATGGGTaGCTGCACTCCTCCAGCACACGGACGCTTTACTGGCCAGGCTAC +
Preference number: 5 (lower is better)
Translates to: KPSWCRSSCKARRDG*LHSSSTRTLYWPGY
Trigger: GTAGCCTGGCCAGTAAAGCGTCCGTGTGCTGGAGGAGTGCAGCCACCCATCCCGGCGGGCCTTGCAGGACGACCGACACCAGGAAGGCTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000403140.6
ENST00000424374.5
ENST00000456376.2
CDS CCA 90 bp CACAAAGCCTTCCTGGTGTCGGTCGTCCTGCAAGGCCCGCCGGGATaGGTGGCTGCACTCCTCCAGCACACGGACGCTTTACTGGCCAGG +
Preference number: 5 (lower is better)
Translates to: HKAFLVSVVLQGPPG*VAALLQHTDALLAR
Trigger: CCTGGCCAGTAAAGCGTCCGTGTGCTGGAGGAGTGCAGCCACCCATCCCGGCGGGCCTTGCAGGACGACCGACACCAGGAAGGCTTTGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000403140.6
ENST00000424374.5
ENST00000456376.2
CDS CCA 90 bp GCGAGGGCATGTACCCACTTGCATAAGGCGGCTGGGGGTGGCTGCTaGGCCTGGCACAAAGCCTTCCTGGTGTCGGTCGTCCTGCAAGGC +
Preference number: 5 (lower is better)
Translates to: ARACTHLHKAAGGGC*AWHKAFLVSVVLQG
Trigger: GCCTTGCAGGACGACCGACACCAGGAAGGCTTTGTGCCAGGCCCAGCAGCCACCCCCAGCCGCCTTATGCAAGTGGGTACATGCCCTCGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000403140.6
ENST00000424374.5
CDS GCA 90 bp CTGGCGAGGGCATGTACCCACTTGCATAAGGCGGCTGGGGGTGGCTaGTGGGCCTGGCACAAAGCCTTCCTGGTGTCGGTCGTCCTGCAA +
Preference number: 5 (lower is better)
Translates to: LARACTHLHKAAGGG*WAWHKAFLVSVVLQ
Trigger: TTGCAGGACGACCGACACCAGGAAGGCTTTGTGCCAGGCCCAGCAGCCACCCCCAGCCGCCTTATGCAAGTGGGTACATGCCCTCGCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000403140.6
ENST00000424374.5
CDS GCA 90 bp CTTCCTGGTGTCGGTCGTCCTGCAAGGCCCGCCGGGATGGGTGGCTaGACTCCTCCAGCACACGGACGCTTTACTGGCCAGGCTACTTTT +
Preference number: 5 (lower is better)
Translates to: LPGVGRPARPAGMGG*TPPAHGRFTGQATF
Trigger: AAAAGTAGCCTGGCCAGTAAAGCGTCCGTGTGCTGGAGGAGTGCAGCCACCCATCCCGGCGGGCCTTGCAGGACGACCGACACCAGGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000403140.6
ENST00000424374.5
ENST00000456376.2
CDS GCA 90 bp GACGCAGATCAGAAAGCTGGCGTCTGGCGAGGGCATGTACCCACTTaGATAAGGCGGCTGGGGGTGGCTGCTGGGCCTGGCACAAAGCCT +
Preference number: 5 (lower is better)
Translates to: DADQKAGVWRGHVPT*IRRLGVAAGPGTKP
Trigger: AGGCTTTGTGCCAGGCCCAGCAGCCACCCCCAGCCGCCTTATGCAAGTGGGTACATGCCCTCGCCAGACGCCAGCTTTCTGATCTGCGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000403140.6
ENST00000424374.5
CDS-3UTR CAA 90 bp GTGTGGTGGTGCAGGCTGCAATCCCAGCTAGTCAGGTGGCTGAGGCAAAAGAATGGTGCTCCCCCAGGGTaGGATGGTGGCCCTTATCCT +
Preference number: 5 (lower is better)
Translates to: VWWCRLQSQLVRWLRQKNGAPPG*DGGPYP
Trigger: AGGATAAGGGCCACCATCCAACCCTGGGGGAGCACC...ATTCTTTTGCCTCAGCCACCTGACTAGCTGGGATTGCAGCCTGCACCACCACAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000403140.6
CDS-3UTR CAA 90 bp GTGTGGTGGTGCAGGCTGCAATCCCAGCTAGTCAGGTGGCTGAGGCAAAAGAATAGGGCATGTACCCACTaGCATAAGGCGGCTGGGGGT +
Preference number: 5 (lower is better)
Translates to: VWWCRLQSQLVRWLRQKNRACTH*HKAAGG
Trigger: ACCCCCAGCCGCCTTATGCAAGTGGGTACATGCCCT...ATTCTTTTGCCTCAGCCACCTGACTAGCTGGGATTGCAGCCTGCACCACCACAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000403140.6
CDS-3UTR CAA 90 bp GGTGTGGTGGTGCAGGCTGCAATCCCAGCTAGTCAGGTGGCTGAGGCAAAAGAAAGGTGGGAGGATTTCTaGAACCCAGAGTTCGAGACC +
Preference number: 5 (lower is better)
Translates to: GVVVQAAIPASQVAEAKERWEDF*NPEFET
Trigger: GGTCTCGAACTCTGGGTTCAAGAAATCCTCCCACCT...TTCTTTTGCCTCAGCCACCTGACTAGCTGGGATTGCAGCCTGCACCACCACACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295571.9
ENST00000383701.8
CDS-3UTR CAA 90 bp GTGTGGTGGTGCAGGCTGCAATCCCAGCTAGTCAGGTGGCTGAGGCAAAAGAATCCACTCCAGAAACCCTaGATTCGATTTCCACAGGCC +
Preference number: 5 (lower is better)
Translates to: VWWCRLQSQLVRWLRQKNPLQKP*IRFPQA
Trigger: GGCCTGTGGAAATCGAATCAAGGGTTTCTGGAGTGG...ATTCTTTTGCCTCAGCCACCTGACTAGCTGGGATTGCAGCCTGCACCACCACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000403140.6
CDS-3UTR CAA 90 bp GAATACTTTCATGCTGACAGAGGTAGACGCACACGCACTGGTATATGCAGTTACAGGGCATGTACCCACTaGCATAAGGCGGCTGGGGGT +
Preference number: 5 (lower is better)
Translates to: EYFHADRGRRTRTGICSYRACTH*HKAAGG
Trigger: ACCCCCAGCCGCCTTATGCAAGTGGGTACATGCCCT...GTAACTGCATATACCAGTGCGTGTGCGTCTACCTCTGTCAGCATGAAAGTATTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295571.9
ENST00000383701.8
CDS-3UTR CAA 90 bp CACAAATGCTCTCCATGGCTAAGAAGGAATCAGTGGAAACCAGACAGAAGGTATGGTGCTCCCCCAGGGTaGGATGGTGGCCCTTATCCT +
Preference number: 5 (lower is better)
Translates to: HKCSPWLRRNQWKPDRRYGAPPG*DGGPYP
Trigger: AGGATAAGGGCCACCATCCAACCCTGGGGGAGCACC...ATACCTTCTGTCTGGTTTCCACTGATTCCTTCTTAGCCATGGAGAGCATTTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295571.9
ENST00000383701.8
CDS CCA 90 bp GGACGCTTTACTGGCCAGGCTACTTTTCCTTCAGCTCAAAGCAGCTaGAATCACTCCACTCCAGAAACCCTTGATTCGATTTCCACAGGC +
Preference number: 5 (lower is better)
Translates to: GRFTGQATFPSAQSS*NHSTPETLDSISTG
Trigger: GCCTGTGGAAATCGAATCAAGGGTTTCTGGAGTGGAGTGATTCCAGCTGCTTTGAGCTGAAGGAAAAGTAGCCTGGCCAGTAAAGCGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000403140.6
ENST00000424374.5
ENST00000456376.2
CDS CCA 90 bp CTCCTCTGGCAAGCGGATGCTGGCATAGTTATACAGAGGTTCGCCTaGAATGCTGTGAGTATTAGGAGGAGCTTCATTCTGACCACTCAG +
Preference number: 5 (lower is better)
Translates to: LLWQADAGIVIQRFA*NAVSIRRSFILTTQ
Trigger: CTGAGTGGTCAGAATGAAGCTCCTCCTAATACTCACAGCATTCCAGGCGAACCTCTGTATAACTATGCCAGCATCCGCTTGCCAGAGGAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000403140.6
ENST00000424374.5
ENST00000456376.2
ENST00000540764.5
ENST00000540955.5
CDS CCA 90 bp GCCCTGACCTTTGGTTATCCAAGTCCATTGTCCTCCAGTGAGCTCTaGCCATCACTAAACTCACCGATCAGTGGAGAAGTAACGCTTAGG +
Preference number: 5 (lower is better)
Translates to: ALTFGYPSPLSSSEL*PSLNSPISGEVTLR
Trigger: CCTAAGCGTTACTTCTCCACTGATCGGTGAGTTTAGTGATGGCCAGAGCTCACTGGAGGACAATGGACTTGGATAACCAAAGGTCAGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424374.5
CDS-3UTR CAA 90 bp GGTGTGGTGGTGCAGGCTGCAATCCCAGCTAGTCAGGTGGCTGAGGCAAAAGAAGTGGCAATATGCCTATaGTTGTGCAAAAAGAAGGGA +
Preference number: 5 (lower is better)
Translates to: GVVVQAAIPASQVAEAKEVAICL*LCKKKG
Trigger: TCCCTTCTTTTTGCACAACAATAGGCATATTGCCAC...TTCTTTTGCCTCAGCCACCTGACTAGCTGGGATTGCAGCCTGCACCACCACACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000403140.6
CDS-3UTR CAA 90 bp GGTGTGGTGGTGCAGGCTGCAATCCCAGCTAGTCAGGTGGCTGAGGCAAAAGAACAAGATAGAGATTGGTaGCTCTGCAGTACTGAAGAT +
Preference number: 5 (lower is better)
Translates to: GVVVQAAIPASQVAEAKEQDRDW*LCSTED
Trigger: ATCTTCAGTACTGCAGAGCAACCAATCTCTATCTTG...TTCTTTTGCCTCAGCCACCTGACTAGCTGGGATTGCAGCCTGCACCACCACACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000403140.6
CDS-3UTR CAA 90 bp AAGGAATCAGTGGAAACCAGACAGAAGGTATGCAAGACAGTCCTACAGAATGTTGGTGCTCCCCCAGGGTaGGATGGTGGCCCTTATCCT +
Preference number: 5 (lower is better)
Translates to: KESVETRQKVCKTVLQNVGAPPG*DGGPYP
Trigger: AGGATAAGGGCCACCATCCAACCCTGGGGGAGCACC...AACATTCTGTAGGACTGTCTTGCATACCTTCTGTCTGGTTTCCACTGATTCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295571.9
ENST00000383701.8
CDS-3UTR CAA 90 bp AAGAATCGCTTGAACCTGGGGAGGCAGAAGTTGCATAAACTGAGATCATGCCACAGGTGGGAGGATTTCTaGAACCCAGAGTTCGAGACC +
Preference number: 5 (lower is better)
Translates to: KNRLNLGRQKLHKLRSCHRWEDF*NPEFET
Trigger: GGTCTCGAACTCTGGGTTCAAGAAATCCTCCCACCT...GTGGCATGATCTCAGTTTATGCAACTTCTGCCTCCCCAGGTTCAAGCGATTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295571.9
ENST00000383701.8
CDS-3UTR CAA 90 bp TGCTCTCCATGGCTAAGAAGGAATCAGTGGAAACCAGACAGAAGGTATGCAAGACCACTCCAGAAACCCTaGATTCGATTTCCACAGGCC +
Preference number: 5 (lower is better)
Translates to: CSPWLRRNQWKPDRRYARPLQKP*IRFPQA
Trigger: GGCCTGTGGAAATCGAATCAAGGGTTTCTGGAGTGG...TCTTGCATACCTTCTGTCTGGTTTCCACTGATTCCTTCTTAGCCATGGAGAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295571.9
ENST00000383701.8
CDS TCA 90 bp CCGTCCATCCCATGTCGACATAGCTGCAAACTGGGTAACCAAACCTaGACTCTGGTTTGCAGGATTTCTCATAACCCCAGCAGTACTTTA +
Preference number: 5 (lower is better)
Translates to: PSIPCRHSCKLGNQT*TLVCRISHNPSSTL
Trigger: TAAAGTACTGCTGGGGTTATGAGAAATCCTGCAAACCAGAGTTCAGGTTTGGTTACCCAGTTTGCAGCTATGTCGACATGGGATGGACGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000403140.6
ENST00000424374.5
ENST00000456376.2
ENST00000540764.5
ENST00000540955.5
CDS CCA 90 bp GGCAATATGCCTATTGTTGTGCAAAAAGAAGGGAATGTGCTCCTCTaGCAAGCGGATGCTGGCATAGTTATACAGAGGTTCGCCTGGAAT +
Preference number: 5 (lower is better)
Translates to: GNMPIVVQKEGNVLL*QADAGIVIQRFAWN
Trigger: ATTCCAGGCGAACCTCTGTATAACTATGCCAGCATCCGCTTGCCAGAGGAGCACATTCCCTTCTTTTTGCACAACAATAGGCATATTGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000403140.6
ENST00000424374.5
ENST00000456376.2
ENST00000540764.5
ENST00000540955.5
CDS-3UTR CAA 90 bp TTTTTCAGAAGTCAATGCCTTGCTGATGCAAAGCGCAACATGCTTTTGTCATCCTGGCCACTTTGGGTGTaGCAATACGTGGTCTGCAGC +
Preference number: 5 (lower is better)
Translates to: FFRSQCLADAKRNMLLSSWPLWV*QYVVCS
Trigger: GCTGCAGACCACGTATTGCAACACCCAAAGTGGCCA...GGATGACAAAAGCATGTTGCGCTTTGCATCAGCAAGGCATTGACTTCTGAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295571.9
ENST00000383701.8
CDS-3UTR CAA 90 bp TCTTGTGTGATGTTTAGTCTGTGTAGTACATGCTGGGCAAATGCCCTGAATAGTTGGCCACTTTGGGTGTaGCAATACGTGGTCTGCAGC +
Preference number: 5 (lower is better)
Translates to: SCVMFSLCSTCWANALNSWPLWV*QYVVCS
Trigger: GCTGCAGACCACGTATTGCAACACCCAAAGTGGCCA...ACTATTCAGGGCATTTGCCCAGCATGTACTACACAGACTAAACATCACACAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403140.6
CDS-3UTR CAA 90 bp GAAGGAATCAGTGGAAACCAGACAGAAGGTATGCAAGACAGTCCTACAGAATGTAGGTGGGAGGATTTCTaGAACCCAGAGTTCGAGACC +
Preference number: 5 (lower is better)
Translates to: EGISGNQTEGMQDSPTECRWEDF*NPEFET
Trigger: GGTCTCGAACTCTGGGTTCAAGAAATCCTCCCACCT...ACATTCTGTAGGACTGTCTTGCATACCTTCTGTCTGGTTTCCACTGATTCCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000615922.1
CDS GCA 90 bp TATTGTTGTGCAAAAAGAAGGGAATGTGCTCCTCTGGCAAGCGGATaGTGGCATAGTTATACAGAGGTTCGCCTGGAATGCTGTGAGTAT +
Preference number: 5 (lower is better)
Translates to: YCCAKRRECAPLASG*WHSYTEVRLECCEY
Trigger: ATACTCACAGCATTCCAGGCGAACCTCTGTATAACTATGCCAGCATCCGCTTGCCAGAGGAGCACATTCCCTTCTTTTTGCACAACAATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000403140.6
ENST00000424374.5
ENST00000456376.2
ENST00000540764.5
ENST00000540955.5
CDS-3UTR CAA 90 bp AAGGAATCAGTGGAAACCAGACAGAAGGTATGCAAGACAGTCCTACAGAATGTTCCACTCCAGAAACCCTaGATTCGATTTCCACAGGCC +
Preference number: 5 (lower is better)
Translates to: KESVETRQKVCKTVLQNVPLQKP*IRFPQA
Trigger: GGCCTGTGGAAATCGAATCAAGGGTTTCTGGAGTGG...AACATTCTGTAGGACTGTCTTGCATACCTTCTGTCTGGTTTCCACTGATTCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295571.9
ENST00000383701.8
CDS-3UTR CAA 90 bp AAGAATCGCTTGAACCTGGGGAGGCAGAAGTTGCATAAACTGAGATCATGCCACCAACCTGCAAACCTCTaGAATCTTCAGAACCACTCA +
Preference number: 5 (lower is better)
Translates to: KNRLNLGRQKLHKLRSCHQPANL*NLQNHS
Trigger: TGAGTGGTTCTGAAGATTCAAGAGGTTTGCAGGTTG...GTGGCATGATCTCAGTTTATGCAACTTCTGCCTCCCCAGGTTCAAGCGATTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000403140.6
CDS-3UTR CAA 90 bp GAAGGAATCAGTGGAAACCAGACAGAAGGTATGCAAGACAGTCCTACAGAATGTCTGGGGAGGCAGAAGTaGCATAAACTGAGATCATGC +
Preference number: 5 (lower is better)
Translates to: EGISGNQTEGMQDSPTECLGRQK*HKLRSC
Trigger: GCATGATCTCAGTTTATGCAACTTCTGCCTCCCCAG...ACATTCTGTAGGACTGTCTTGCATACCTTCTGTCTGGTTTCCACTGATTCCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295571.9
ENST00000383701.8
CDS-3UTR CAA 90 bp TATTCTGTGCTCCGTGCAAGAATGGTGACTCGAATTTTTCCATCCTTAGGTCCTCTGGGGAGGCAGAAGTaGCATAAACTGAGATCATGC +
Preference number: 5 (lower is better)
Translates to: YSVLRARMVTRIFPSLGPLGRQK*HKLRSC
Trigger: GCATGATCTCAGTTTATGCAACTTCTGCCTCCCCAG...AGGACCTAAGGATGGAAAAATTCGAGTCACCATTCTTGCACGGAGCACAGAATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000403140.6
CDS-3UTR CAA 90 bp GAATACTTTCATGCTGACAGAGGTAGACGCACACGCACTGGTATATGCAGTTACTCAGAAGTCAATGCCTaGCTGATGCAAAGCGCAACA +
Preference number: 5 (lower is better)
Translates to: EYFHADRGRRTRTGICSYSEVNA*LMQSAT
Trigger: TGTTGCGCTTTGCATCAGCAAGGCATTGACTTCTGA...GTAACTGCATATACCAGTGCGTGTGCGTCTACCTCTGTCAGCATGAAAGTATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000615922.1
CDS-3UTR CAA 90 bp AAGAATCGCTTGAACCTGGGGAGGCAGAAGTTGCATAAACTGAGATCATGCCACGTGGCAATATGCCTATaGTTGTGCAAAAAGAAGGGA +
Preference number: 5 (lower is better)
Translates to: KNRLNLGRQKLHKLRSCHVAICL*LCKKKG
Trigger: TCCCTTCTTTTTGCACAACAATAGGCATATTGCCAC...GTGGCATGATCTCAGTTTATGCAACTTCTGCCTCCCCAGGTTCAAGCGATTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000403140.6
CDS-3UTR CAA 90 bp CACAAATGCTCTCCATGGCTAAGAAGGAATCAGTGGAAACCAGACAGAAGGTATCAACCTGCAAACCTCTaGAATCTTCAGAACCACTCA +
Preference number: 5 (lower is better)
Translates to: HKCSPWLRRNQWKPDRRYQPANL*NLQNHS
Trigger: TGAGTGGTTCTGAAGATTCAAGAGGTTTGCAGGTTG...ATACCTTCTGTCTGGTTTCCACTGATTCCTTCTTAGCCATGGAGAGCATTTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295571.9
ENST00000383701.8
CDS-3UTR CAA 90 bp GAATACTTTCATGCTGACAGAGGTAGACGCACACGCACTGGTATATGCAGTTACACATGGTCCTATAGCTaGGTACTGAGAATCACAACT +
Preference number: 5 (lower is better)
Translates to: EYFHADRGRRTRTGICSYTWSYS*VLRITT
Trigger: AGTTGTGATTCTCAGTACCAAGCTATAGGACCATGT...GTAACTGCATATACCAGTGCGTGTGCGTCTACCTCTGTCAGCATGAAAGTATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000615922.1
CDS-3UTR CAA 90 bp TGCTCTCCATGGCTAAGAAGGAATCAGTGGAAACCAGACAGAAGGTATGCAAGAACATGGTCCTATAGCTaGGTACTGAGAATCACAACT +
Preference number: 5 (lower is better)
Translates to: CSPWLRRNQWKPDRRYARTWSYS*VLRITT
Trigger: AGTTGTGATTCTCAGTACCAAGCTATAGGACCATGT...TCTTGCATACCTTCTGTCTGGTTTCCACTGATTCCTTCTTAGCCATGGAGAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000615922.1
CDS-3UTR CAA 90 bp AAGGAATCAGTGGAAACCAGACAGAAGGTATGCAAGACAGTCCTACAGAATGTTTCAGAAGTCAATGCCTaGCTGATGCAAAGCGCAACA +
Preference number: 5 (lower is better)
Translates to: KESVETRQKVCKTVLQNVSEVNA*LMQSAT
Trigger: TGTTGCGCTTTGCATCAGCAAGGCATTGACTTCTGA...AACATTCTGTAGGACTGTCTTGCATACCTTCTGTCTGGTTTCCACTGATTCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000615922.1
CDS-3UTR CAA 90 bp GAAGGAATCAGTGGAAACCAGACAGAAGGTATGCAAGACAGTCCTACAGAATGTGTGGCAATATGCCTATaGTTGTGCAAAAAGAAGGGA +
Preference number: 5 (lower is better)
Translates to: EGISGNQTEGMQDSPTECVAICL*LCKKKG
Trigger: TCCCTTCTTTTTGCACAACAATAGGCATATTGCCAC...ACATTCTGTAGGACTGTCTTGCATACCTTCTGTCTGGTTTCCACTGATTCCTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295571.9
ENST00000383701.8
CDS GCA 90 bp TTCTTATATGGACAAAGAGAGTCTTTCCTACAGACAGTGGCAATATaGCTATTGTTGTGCAAAAAGAAGGGAATGTGCTCCTCTGGCAAG +
Preference number: 5 (lower is better)
Translates to: FLYGQRESFLQTVAI*LLLCKKKGMCSSGK
Trigger: CTTGCCAGAGGAGCACATTCCCTTCTTTTTGCACAACAATAGGCATATTGCCACTGTCTGTAGGAAAGACTCTCTTTGTCCATATAAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000403140.6
ENST00000424374.5
ENST00000456376.2
ENST00000540764.5
ENST00000540955.5
CDS-3UTR CAA 90 bp GGAAACCAGACAGAAGGTATGCAAGACAGTCCTACAGAATGTTCTAATTTGCTTCAACCTGCAAACCTCTaGAATCTTCAGAACCACTCA +
Preference number: 5 (lower is better)
Translates to: GNQTEGMQDSPTECSNLLQPANL*NLQNHS
Trigger: TGAGTGGTTCTGAAGATTCAAGAGGTTTGCAGGTTG...AAGCAAATTAGAACATTCTGTAGGACTGTCTTGCATACCTTCTGTCTGGTTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295571.9
ENST00000383701.8
CDS-3UTR CAA 90 bp GTGGAAACCAGACAGAAGGTATGCAAGACAGTCCTACAGAATGTTCTAATTTGCCAAGATAGAGATTGGTaGCTCTGCAGTACTGAAGAT +
Preference number: 5 (lower is better)
Translates to: VETRQKVCKTVLQNVLICQDRDW*LCSTED
Trigger: ATCTTCAGTACTGCAGAGCAACCAATCTCTATCTTG...GCAAATTAGAACATTCTGTAGGACTGTCTTGCATACCTTCTGTCTGGTTTCCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295571.9
ENST00000383701.8
CDS-3UTR CAA 90 bp TTTTTCAGAAGTCAATGCCTTGCTGATGCAAAGCGCAACATGCTTTTGTCATCCCAAGATAGAGATTGGTaGCTCTGCAGTACTGAAGAT +
Preference number: 5 (lower is better)
Translates to: FFRSQCLADAKRNMLLSSQDRDW*LCSTED
Trigger: ATCTTCAGTACTGCAGAGCAACCAATCTCTATCTTG...GGATGACAAAAGCATGTTGCGCTTTGCATCAGCAAGGCATTGACTTCTGAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295571.9
ENST00000383701.8
CDS TCA 90 bp TTTTCCATCGGTGTCCCACATCACGATGTACACGTCAGTACTGAATaGGTTATTAACGTGCTGAGTAATATAAAGATTGATGAAATCACA +
Preference number: 5 (lower is better)
Translates to: FSIGVPHHDVHVSTE*VINVLSNIKIDEIT
Trigger: TGTGATTTCATCAATCTTTATATTACTCAGCACGTTAATAACTCATTCAGTACTGACGTGTACATCGTGATGTGGGACACCGATGGAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295571.9
ENST00000540955.5
CDS TCA 90 bp GTAAGAACTGGTGTCCCACATCACGATGTACACGTCAGTACTGAATaGGTTATTAACGTGCTGAGTAATATAAAGATTGATGAAATCACA +
Preference number: 5 (lower is better)
Translates to: VRTGVPHHDVHVSTE*VINVLSNIKIDEIT
Trigger: TGTGATTTCATCAATCTTTATATTACTCAGCACGTTAATAACTCATTCAGTACTGACGTGTACATCGTGATGTGGGACACCAGTTCTTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383701.8
ENST00000496647.5
ENST00000540764.5
CDS GCA 72 bp GGGCCTGGCACAAAGCCTTCCTGGTGTCGGTCGTCCTaGAAGGCCCGCCGGGATGGGTGGCTGCACTCCTCC +
Preference number: 6 (lower is better)
Translates to: GPGTKPSWCRSS*KARRDGWLHSS
Trigger: GGAGGAGTGCAGCCACCCATCCCGGCGGGCCTTGCAGGACGACCGACACCAGGAAGGCTTTGTGCCAGGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000403140.6
ENST00000424374.5
ENST00000456376.2
CDS GCA 72 bp GTCGGTCGTCCTGCAAGGCCCGCCGGGATGGGTGGCTaGACTCCTCCAGCACACGGACGCTTTACTGGCCAG +
Preference number: 6 (lower is better)
Translates to: VGRPARPAGMGG*TPPAHGRFTGQ
Trigger: CTGGCCAGTAAAGCGTCCGTGTGCTGGAGGAGTGCAGCCACCCATCCCGGCGGGCCTTGCAGGACGACCGAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000403140.6
ENST00000424374.5
ENST00000456376.2
CDS TCA 72 bp GATTCGATTTCCACAGGCCTGGAGCCGGGGCAGCCGTaGACTACCGAGGAGGAGGCGGAGGAGACGGCGGCT +
Preference number: 6 (lower is better)
Translates to: DSISTGLEPGQP*TTEEEAEETAA
Trigger: AGCCGCCGTCTCCTCCGCCTCCTCCTCGGTAGTTCACGGCTGCCCCGGCTCCAGGCCTGTGGAAATCGAATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383701.8
ENST00000403140.6
ENST00000456376.2
CDS GCA 72 bp CAGAAAGCTGGCGTCTGGCGAGGGCATGTACCCACTTaGATAAGGCGGCTGGGGGTGGCTGCTGGGCCTGGC +
Preference number: 6 (lower is better)
Translates to: QKAGVWRGHVPT*IRRLGVAAGPG
Trigger: GCCAGGCCCAGCAGCCACCCCCAGCCGCCTTATGCAAGTGGGTACATGCCCTCGCCAGACGCCAGCTTTCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000403140.6
ENST00000424374.5
CDS CCA 72 bp TTCCTGGTGTCGGTCGTCCTGCAAGGCCCGCCGGGATaGGTGGCTGCACTCCTCCAGCACACGGACGCTTTA +
Preference number: 6 (lower is better)
Translates to: FLVSVVLQGPPG*VAALLQHTDAL
Trigger: TAAAGCGTCCGTGTGCTGGAGGAGTGCAGCCACCCATCCCGGCGGGCCTTGCAGGACGACCGACACCAGGAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000403140.6
ENST00000424374.5
ENST00000456376.2
CDS CAA 72 bp TCAGAAAGCTGGCGTCTGGCGAGGGCATGTACCCACTaGCATAAGGCGGCTGGGGGTGGCTGCTGGGCCTGG +
Preference number: 6 (lower is better)
Translates to: SESWRLARACTH*HKAAGGGCWAW
Trigger: CCAGGCCCAGCAGCCACCCCCAGCCGCCTTATGCAAGTGGGTACATGCCCTCGCCAGACGCCAGCTTTCTGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000403140.6
ENST00000424374.5
CDS CCA 72 bp TGTACCCACTTGCATAAGGCGGCTGGGGGTGGCTGCTaGGCCTGGCACAAAGCCTTCCTGGTGTCGGTCGTC +
Preference number: 6 (lower is better)
Translates to: CTHLHKAAGGGC*AWHKAFLVSVV
Trigger: GACGACCGACACCAGGAAGGCTTTGTGCCAGGCCCAGCAGCCACCCCCAGCCGCCTTATGCAAGTGGGTACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000403140.6
ENST00000424374.5
CDS CAA 90 bp AGACGCAGATCAGAAAGCTGGCGTCTGGCGAGGGCATGTACCCACTaGCATAAGGCGGCTGGGGGTGGCTGCTGGGCCTGGCACAAAGCC +
Preference number: 6 (lower is better)
Translates to: RRRSESWRLARACTH*HKAAGGGCWAWHKA
Trigger: GGCTTTGTGCCAGGCCCAGCAGCCACCCCCAGCCGCCTTATGCAAGTGGGTACATGCCCTCGCCAGACGCCAGCTTTCTGATCTGCGTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000403140.6
ENST00000424374.5
CDS GCA 72 bp GCAAAAAGAAGGGAATGTGCTCCTCTGGCAAGCGGATaGTGGCATAGTTATACAGAGGTTCGCCTGGAATGC +
Preference number: 6 (lower is better)
Translates to: AKRRECAPLASG*WHSYTEVRLEC
Trigger: GCATTCCAGGCGAACCTCTGTATAACTATGCCAGCATCCGCTTGCCAGAGGAGCACATTCCCTTCTTTTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000403140.6
ENST00000424374.5
ENST00000456376.2
ENST00000540764.5
ENST00000540955.5
CDS CCA 72 bp AAAAGAAGGGAATGTGCTCCTCTGGCAAGCGGATGCTaGCATAGTTATACAGAGGTTCGCCTGGAATGCTGT +
Preference number: 6 (lower is better)
Translates to: KRRECAPLASGC*HSYTEVRLECC
Trigger: ACAGCATTCCAGGCGAACCTCTGTATAACTATGCCAGCATCCGCTTGCCAGAGGAGCACATTCCCTTCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000403140.6
ENST00000424374.5
ENST00000456376.2
ENST00000540764.5
ENST00000540955.5
CDS TCA 72 bp AGCTCAGCAAACCATGACTGCAGAGGGCTTTTGCGCTaGCCTTCAGACGTCAATGTACGGATGTCAAGTTTA +
Preference number: 6 (lower is better)
Translates to: SSANHDCRGLLR*PSDVNVRMSSL
Trigger: TAAACTTGACATCCGTACATTGACGTCTGAAGGTCAGCGCAAAAGCCCTCTGCAGTCATGGTTTGCTGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000540764.5
ENST00000540955.5
CDS TCA 72 bp GGATTTTCCGGTATTCTGTGCTCCGTGCAAGAATGGTaGCTCGAATTTTTCCATCGGTGTCCCACATCACGA +
Preference number: 6 (lower is better)
Translates to: GFSGILCSVQEW*LEFFHRCPTSR
Trigger: TCGTGATGTGGGACACCGATGGAAAAATTCGAGTCACCATTCTTGCACGGAGCACAGAATACCGGAAAATCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295571.9
ENST00000540955.5
CDS GCA 72 bp TTTGTAGCTCAGCAAACCATGACTGCAGAGGGCTTTTaGGCTGACCTTCAGACGTCAATGTACGGATGTCAA +
Preference number: 6 (lower is better)
Translates to: FVAQQTMTAEGF*ADLQTSMYGCQ
Trigger: TTGACATCCGTACATTGACGTCTGAAGGTCAGCGCAAAAGCCCTCTGCAGTCATGGTTTGCTGAGCTACAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000540764.5
ENST00000540955.5
CDS CCA 72 bp CAAGCGGATGCTGGCATAGTTATACAGAGGTTCGCCTaGAATGCTGTGAGTATTAGGAGGAGCTTCATTCTG +
Preference number: 6 (lower is better)
Translates to: QADAGIVIQRFA*NAVSIRRSFIL
Trigger: CAGAATGAAGCTCCTCCTAATACTCACAGCATTCCAGGCGAACCTCTGTATAACTATGCCAGCATCCGCTTG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000403140.6
ENST00000424374.5
ENST00000456376.2
ENST00000540764.5
ENST00000540955.5
CDS CAA 72 bp TATGACCAAGCCCTGACCTTTGGTTATCCAAGTCCATaGTCCTCCAGTGAGCTCTGGCCATCACTAAACTCA +
Preference number: 6 (lower is better)
Translates to: YDQALTFGYPSP*SSSELWPSLNS
Trigger: TGAGTTTAGTGATGGCCAGAGCTCACTGGAGGACAATGGACTTGGATAACCAAAGGTCAGGGCTTGGTCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424374.5
CDS CAA 90 bp GGACAAAGAGAGTCTTTCCTACAGACAGTGGCAATATGCCTATTGTaGTGCAAAAAGAAGGGAATGTGCTCCTCTGGCAAGCGGATGCTG +
Preference number: 6 (lower is better)
Translates to: GQRESFLQTVAICLL*CKKKGMCSSGKRML
Trigger: CAGCATCCGCTTGCCAGAGGAGCACATTCCCTTCTTTTTGCACAACAATAGGCATATTGCCACTGTCTGTAGGAAAGACTCTCTTTGTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000403140.6
ENST00000424374.5
ENST00000456376.2
ENST00000540764.5
ENST00000540955.5
CDS CAA 90 bp AGTCATTGTTATGACCAAGCCCTGACCTTTGGTTATCCAAGTCCATaGTCCTCCAGTGAGCTCTGGCCATCACTAAACTCACCGATCAGT +
Preference number: 6 (lower is better)
Translates to: SHCYDQALTFGYPSP*SSSELWPSLNSPIS
Trigger: ACTGATCGGTGAGTTTAGTGATGGCCAGAGCTCACTGGAGGACAATGGACTTGGATAACCAAAGGTCAGGGCTTGGTCATAACAATGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424374.5
CDS GCA 72 bp CCTTCAGACGTCAATGTACGGATGTCAAGTTTACAGTaGCCTCCAATTTCACCACTCTGGAAAAAGTCCTCC +
Preference number: 6 (lower is better)
Translates to: PSDVNVRMSSLQ*PPISPLWKKSS
Trigger: GGAGGACTTTTTCCAGAGTGGTGAAATTGGAGGGCACTGTAAACTTGACATCCGTACATTGACGTCTGAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000403140.6
ENST00000540764.5
ENST00000540955.5
CDS CCA 72 bp CCTATTGTTGTGCAAAAAGAAGGGAATGTGCTCCTCTaGCAAGCGGATGCTGGCATAGTTATACAGAGGTTC +
Preference number: 6 (lower is better)
Translates to: PIVVQKEGNVLL*QADAGIVIQRF
Trigger: GAACCTCTGTATAACTATGCCAGCATCCGCTTGCCAGAGGAGCACATTCCCTTCTTTTTGCACAACAATAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000403140.6
ENST00000424374.5
ENST00000456376.2
ENST00000540764.5
ENST00000540955.5
CDS CCA 72 bp TTTGGTTATCCAAGTCCATTGTCCTCCAGTGAGCTCTaGCCATCACTAAACTCACCGATCAGTGGAGAAGTA +
Preference number: 6 (lower is better)
Translates to: FGYPSPLSSSEL*PSLNSPISGEV
Trigger: TACTTCTCCACTGATCGGTGAGTTTAGTGATGGCCAGAGCTCACTGGAGGACAATGGACTTGGATAACCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424374.5
CDS TCA 72 bp CTTCCCGGTAATAAAGTCATTGTTATGACCAAGCCCTaGCCTTTGGTTATCCAAGTCCATTGTCCTCCAGTG +
Preference number: 6 (lower is better)
Translates to: LPGNKVIVMTKP*PLVIQVHCPPV
Trigger: CACTGGAGGACAATGGACTTGGATAACCAAAGGTCAGGGCTTGGTCATAACAATGACTTTATTACCGGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424374.5
CDS CAA 72 bp TGCTTTCTAGCCCCCTTGACCTCATCCAAGCAAAAGTaGACAGTGTCTGCTGAGATTGGCTATTACTTACCT +
Preference number: 6 (lower is better)
Translates to: CFLAPLTSSKQK*TVSAEIGYYLP
Trigger: AGGTAAGTAATAGCCAATCTCAGCAGACACTGTCAACTTTTGCTTGGATGAGGTCAAGGGGGCTAGAAAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480846.1
CDS TCA 72 bp TTTGACTCGTCCTTCCCGGTAATAAAGTCATTGTTATaGCCAAGCCCTGACCTTTGGTTATCCAAGTCCATT +
Preference number: 6 (lower is better)
Translates to: FDSSFPVIKSLL*PSPDLWLSKSI
Trigger: AATGGACTTGGATAACCAAAGGTCAGGGCTTGGTCATAACAATGACTTTATTACCGGGAAGGACGAGTCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424374.5
CDS TCA 72 bp GGTGTCCCACATCACGATGTACACGTCAGTACTGAATaGGTTATTAACGTGCTGAGTAATATAAAGATTGAT +
Preference number: 6 (lower is better)
Translates to: GVPHHDVHVSTE*VINVLSNIKID
Trigger: ATCAATCTTTATATTACTCAGCACGTTAATAACTCATTCAGTACTGACGTGTACATCGTGATGTGGGACACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295571.9
ENST00000383701.8
ENST00000496647.5
ENST00000540764.5
ENST00000540955.5