RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ENY2 (Homo sapiens)

Ensembl gene IDs: ENSG00000120533

Ensembl transcript IDs: ENST00000517311.5, ENST00000517350.5, ENST00000517756.5, ENST00000518584.5, ENST00000520147.5, ENST00000521619.1, ENST00000521688.6, ENST00000522407.5, ENST00000522632.1, ENST00000523335.1

Found 169 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CGAGGGCACGTAGTGGATAATTTACAGCCTTGCTATATTCAGAAGTaGTTCTCAATCAGCAGCATGAGCACCAGTTGGGTACTCGCCAGA +
Preference number: 1 (lower is better)
Translates to: RGHVVDNLQPCYIQK*FSISSMSTSWVLAR
Trigger: TCTGGCGAGTACCCAACTGGTGCTCATGCTGCTGATTGAGAACCACTTCTGAATATAGCAAGGCTGTAAATTATCCACTACGTGCCCTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517311.5
ENST00000521688.6
3UTR TCA 90 bp CTCCACAAGAAACAGAAGGAACTTCCAGTGGTAGCAAAAGCAATGTaGGGAGTGGGAAGAGAGTTCCAAGTGGCAGGATGGTCAACATTC +
Preference number: 1 (lower is better)
Translates to: LHKKQKELPVVAKAM*GVGREFQVAGWSTF
Trigger: GAATGTTGACCATCCTGCCACTTGGAACTCTCTTCCCACTCCTCACATTGCTTTTGCTACCACTGGAAGTTCCTTCTGTTTCTTGTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000517311.5
ENST00000521688.6
ENST00000523335.1
3UTR TCA 90 bp ATTTACAGCCTTGCTATATTCAGAAGTGGTTCTCAATCAGCAGCATaGGCACCAGTTGGGTACTCGCCAGAAATACAGAATCTTAAAGCC +
Preference number: 1 (lower is better)
Translates to: IYSLAIFRSGSQSAA*APVGYSPEIQNLKA
Trigger: GGCTTTAAGATTCTGTATTTCTGGCGAGTACCCAACTGGTGCTCATGCTGCTGATTGAGAACCACTTCTGAATATAGCAAGGCTGTAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517311.5
ENST00000521688.6
3UTR GCA 90 bp GAACTAAGACAATTACGAGGGCACGTAGTGGATAATTTACAGCCTTaGTATATTCAGAAGTGGTTCTCAATCAGCAGCATGAGCACCAGT +
Preference number: 1 (lower is better)
Translates to: ELRQLRGHVVDNLQP*YIQKWFSISSMSTS
Trigger: ACTGGTGCTCATGCTGCTGATTGAGAACCACTTCTGAATATAGCAAGGCTGTAAATTATCCACTACGTGCCCTCGTAATTGTCTTAGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517311.5
ENST00000521688.6
3UTR TCA 90 bp AAGTCAGAGGGATGTCTGAATGTTTTAGCAACTAAAGCTGAACTCTaGAGGGCAAACAGGAATGAGAAACATATGAGAAAGGGGGCTTCT +
Preference number: 1 (lower is better)
Translates to: KSEGCLNVLATKAEL*RANRNEKHMRKGAS
Trigger: AGAAGCCCCCTTTCTCATATGTTTCTCATTCCTGTTTGCCCTTCAGAGTTCAGCTTTAGTTGCTAAAACATTCAGACATCCCTCTGACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000517311.5
ENST00000521688.6
3UTR TCA 90 bp AGTATGTGGGGTTGCAATTTAAAGATTCTGCATTCAAAGTTCAGATaGGTAGAGTATGTGGAAGGAGCTTGGTATGGAGCCAACTTGCAA +
Preference number: 1 (lower is better)
Translates to: SMWGCNLKILHSKFR*VEYVEGAWYGANLQ
Trigger: TTGCAAGTTGGCTCCATACCAAGCTCCTTCCACATACTCTACTCATCTGAACTTTGAATGCAGAATCTTTAAATTGCAACCCCACATACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000517311.5
ENST00000521688.6
ENST00000523335.1
3UTR TCA 90 bp TGGAGACAGTTTAGCATTTATCAACCTGTATTTGAAGTCACGGTCTaGCGCAAGTTTCCTGGGATTTGCTCAGGAAAAGTATATCCAGTT +
Preference number: 1 (lower is better)
Translates to: WRQFSIYQPVFEVTV*RKFPGICSGKVYPV
Trigger: AACTGGATATACTTTTCCTGAGCAAATCCCAGGAAACTTGCGTCAGACCGTGACTTCAAATACAGGTTGATAAATGCTAAACTGTCTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000517311.5
ENST00000521688.6
ENST00000523335.1
3UTR-3UTR CCA 90 bp ACCATATGCAGTCAGAAAAGGTTGCTTACTTCTCAGCTGTTAACACAGAGAACTCCAGGGTGTGTTGGCTaGGTACGATGGCTCACGCCT +
Preference number: 2 (lower is better)
Translates to: TICSQKRLLTSQLLTQRTPGCVG*VRWLTP
Trigger: AGGCGTGAGCCATCGTACCCAGCCAACACACCCTGG...AGTTCTCTGTGTTAACAGCTGAGAAGTAAGCAACCTTTTCTGACTGCATATGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520147.5
3UTR-3UTR CCA 90 bp TATATTCAGAAGTGGTTCTCAATCAGCAGCATGAGCACCAGTTGGGTACTCGCCTATGTGGAAGGAGCTTaGTATGGAGCCAACTTGCAA +
Preference number: 2 (lower is better)
Translates to: YIQKWFSISSMSTSWVLAYVEGA*YGANLQ
Trigger: TTGCAAGTTGGCTCCATACCAAGCTCCTTCCACATA...GGCGAGTACCCAACTGGTGCTCATGCTGCTGATTGAGAACCACTTCTGAATATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517311.5
ENST00000521688.6
3UTR-3UTR CCA 90 bp GGAACTTCCAGTGGTAGCAAAAGCAATGTGAGGAGTGGGAAGAGAGTTCCAAGTTATGTGGAAGGAGCTTaGTATGGAGCCAACTTGCAA +
Preference number: 2 (lower is better)
Translates to: GTSSGSKSNVRSGKRVPSYVEGA*YGANLQ
Trigger: TTGCAAGTTGGCTCCATACCAAGCTCCTTCCACATA...ACTTGGAACTCTCTTCCCACTCCTCACATTGCTTTTGCTACCACTGGAAGTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000517311.5
ENST00000521688.6
ENST00000523335.1
3UTR-3UTR CCA 90 bp CACCAGTTGGGTACTCGCCAGAAATACAGAATCTTAAAGCCATGCCCCTTATCTAAGCAATGTGAGGAGTaGGAAGAGAGTTCCAAGTGG +
Preference number: 2 (lower is better)
Translates to: HQLGTRQKYRILKPCPLSKQCEE*EESSKW
Trigger: CCACTTGGAACTCTCTTCCCACTCCTCACATTGCTT...AGATAAGGGGCATGGCTTTAAGATTCTGTATTTCTGGCGAGTACCCAACTGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517311.5
ENST00000521688.6
3UTR-3UTR TCA 90 bp AGTGGGAAGAGAGTTCCAAGTGGCAGGATGGTCAACATTCGCATTTTCCAGCAGCATTCAAAGTTCAGATaGGTAGAGTATGTGGAAGGA +
Preference number: 2 (lower is better)
Translates to: SGKRVPSGRMVNIRIFQQHSKFR*VEYVEG
Trigger: TCCTTCCACATACTCTACTCATCTGAACTTTGAATG...CTGCTGGAAAATGCGAATGTTGACCATCCTGCCACTTGGAACTCTCTTCCCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000517311.5
ENST00000521688.6
ENST00000523335.1
3UTR-3UTR TCA 90 bp TCCTCCTTTCCAGGAGAGGCCTGCAAAATTTCAAGAACTACTGTGTTGAAGAGGACTAAAGCTGAACTCTaGAGGGCAAACAGGAATGAG +
Preference number: 2 (lower is better)
Translates to: SSFPGEACKISRTTVLKRTKAEL*RANRNE
Trigger: CTCATTCCTGTTTGCCCTTCAGAGTTCAGCTTTAGT...CCTCTTCAACACAGTAGTTCTTGAAATTTTGCAGGCCTCTCCTGGAAAGGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517311.5
ENST00000521688.6
3UTR-3UTR GCA 90 bp GAGGAGTGGGAAGAGAGTTCCAAGTGGCAGGATGGTCAACATTCGCATTTTCCAGAGGAATACACCATATaGAGTCAGAAAAGGTTGCTT +
Preference number: 2 (lower is better)
Translates to: EEWEESSKWQDGQHSHFPEEYTI*SQKRLL
Trigger: AAGCAACCTTTTCTGACTGCATATGGTGTATTCCTC...TGGAAAATGCGAATGTTGACCATCCTGCCACTTGGAACTCTCTTCCCACTCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000517311.5
ENST00000521688.6
ENST00000523335.1
3UTR-3UTR CCA 90 bp CACCAGTTGGGTACTCGCCAGAAATACAGAATCTTAAAGCCATGCCCCTTATCTGGAAGGAGCTTGGTATaGAGCCAACTTGCAAATGTT +
Preference number: 2 (lower is better)
Translates to: HQLGTRQKYRILKPCPLSGRSLV*SQLANV
Trigger: AACATTTGCAAGTTGGCTCCATACCAAGCTCCTTCC...AGATAAGGGGCATGGCTTTAAGATTCTGTATTTCTGGCGAGTACCCAACTGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517311.5
ENST00000521688.6
3UTR-3UTR TCA 90 bp GACGCAAGTTTCCTGGGATTTGCTCAGGAAAAGTATATCCAGTTAGTGAGGCAGTGGATTTGGCAATCCTaGTGTCAGGGTAAAGCTAAT +
Preference number: 2 (lower is better)
Translates to: DASFLGFAQEKYIQLVRQWIWQS*CQGKAN
Trigger: ATTAGCTTTACCCTGACATCAGGATTGCCAAATCCA...CTGCCTCACTAACTGGATATACTTTTCCTGAGCAAATCCCAGGAAACTTGCGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000517311.5
ENST00000521688.6
ENST00000523335.1
3UTR-3UTR TCA 90 bp AAGTTTCCTGGGATTTGCTCAGGAAAAGTATATCCAGTTAGTGAGGCAGAGGGCTGGATTTGGCAATCCTaGTGTCAGGGTAAAGCTAAT +
Preference number: 2 (lower is better)
Translates to: KFPGICSGKVYPVSEAEGWIWQS*CQGKAN
Trigger: ATTAGCTTTACCCTGACATCAGGATTGCCAAATCCA...GCCCTCTGCCTCACTAACTGGATATACTTTTCCTGAGCAAATCCCAGGAAACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000517311.5
ENST00000521688.6
ENST00000523335.1
3UTR-3UTR CCA 90 bp CAAGTGGCAGGATGGTCAACATTCGCATTTTCCAGCAGAAGTCACGTAAGAATAGGAAGGAGCTTGGTATaGAGCCAACTTGCAAATGTT +
Preference number: 2 (lower is better)
Translates to: QVAGWSTFAFSSRSHVRIGRSLV*SQLANV
Trigger: AACATTTGCAAGTTGGCTCCATACCAAGCTCCTTCC...TATTCTTACGTGACTTCTGCTGGAAAATGCGAATGTTGACCATCCTGCCACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000517311.5
ENST00000521688.6
ENST00000523335.1
3UTR-3UTR CCA 90 bp GTCAGATCAAGAAGGGCCTATGTGTTAATGCTGAATGAGTTTCATTCTACATTGTTGATCCATAGCAGTTaGGTGTCTGGGTGTGGAGGC +
Preference number: 2 (lower is better)
Translates to: VRSRRAYVLMLNEFHSTLLIHSS*VSGCGG
Trigger: GCCTCCACACCCAGACACCCAACTGCTATGGATCAA...CAATGTAGAATGAAACTCATTCAGCATTAACACATAGGCCCTTCTTGATCTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517311.5
ENST00000521688.6
3UTR CAA 90 bp GATGAAGTCTGGTTTGGAGACAGTTTAGCATTTATCAACCTGTATTaGAAGTCACGGTCTGACGCAAGTTTCCTGGGATTTGCTCAGGAA +
Preference number: 2 (lower is better)
Translates to: DEVWFGDSLAFINLY*KSRSDASFLGFAQE
Trigger: TTCCTGAGCAAATCCCAGGAAACTTGCGTCAGACCGTGACTTCAAATACAGGTTGATAAATGCTAAACTGTCTCCAAACCAGACTTCATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000517311.5
ENST00000521688.6
ENST00000523335.1
3UTR-3UTR GCA 90 bp GACGCAAGTTTCCTGGGATTTGCTCAGGAAAAGTATATCCAGTTAGTGAGGCAGGGTATGGAGCCAACTTaGAAATGTTCTCTTCCATTA +
Preference number: 2 (lower is better)
Translates to: DASFLGFAQEKYIQLVRQGMEPT*KCSLPL
Trigger: TAATGGAAGAGAACATTTGCAAGTTGGCTCCATACC...CTGCCTCACTAACTGGATATACTTTTCCTGAGCAAATCCCAGGAAACTTGCGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000517311.5
ENST00000521688.6
ENST00000523335.1
3UTR-3UTR CCA 90 bp AGTCTGGTTTGGAGACAGTTTAGCATTTATCAACCTGTATTTGAAGTCACGGTCAAGCAATGTGAGGAGTaGGAAGAGAGTTCCAAGTGG +
Preference number: 2 (lower is better)
Translates to: SLVWRQFSIYQPVFEVTVKQCEE*EESSKW
Trigger: CCACTTGGAACTCTCTTCCCACTCCTCACATTGCTT...GACCGTGACTTCAAATACAGGTTGATAAATGCTAAACTGTCTCCAAACCAGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000517311.5
ENST00000521688.6
ENST00000523335.1
3UTR-3UTR TCA 90 bp TTACTAAGGCCACTTAGGCAACAGTGTGGAATAGATATTGGAGGGGTCACAGATCATTCAAAGTTCAGATaGGTAGAGTATGTGGAAGGA +
Preference number: 2 (lower is better)
Translates to: LLRPLRQQCGIDIGGVTDHSKFR*VEYVEG
Trigger: TCCTTCCACATACTCTACTCATCTGAACTTTGAATG...ATCTGTGACCCCTCCAATATCTATTCCACACTGTTGCCTAAGTGGCCTTAGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517311.5
ENST00000521688.6
3UTR-3UTR GCA 90 bp GACGCAAGTTTCCTGGGATTTGCTCAGGAAAAGTATATCCAGTTAGTGAGGCAGCTTAGTATGTGGGGTTaGAATTTAAAGATTCTGCAT +
Preference number: 2 (lower is better)
Translates to: DASFLGFAQEKYIQLVRQLSMWG*NLKILH
Trigger: ATGCAGAATCTTTAAATTGCAACCCCACATACTAAG...CTGCCTCACTAACTGGATATACTTTTCCTGAGCAAATCCCAGGAAACTTGCGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000517311.5
ENST00000521688.6
ENST00000523335.1
3UTR-3UTR CCA 90 bp GAAATTGTCTCTCGAACCAAAGATCAATTTGAATCCTTTTCTCAACTATACCCAGAGAAAGGGGGCTTCTaGGTTCAAAGGTACTTACGG +
Preference number: 2 (lower is better)
Translates to: EIVSRTKDQFESFSQLYPEKGGF*VQRYLR
Trigger: CCGTAAGTACCTTTGAACCCAGAAGCCCCCTTTCTC...TGGGTATAGTTGAGAAAAGGATTCAAATTGATCTTTGGTTCGAGAGACAATTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000517311.5
ENST00000521688.6
3UTR-3UTR GCA 90 bp AGTCTGGTTTGGAGACAGTTTAGCATTTATCAACCTGTATTTGAAGTCACGGTCGAGGAATACACCATATaGAGTCAGAAAAGGTTGCTT +
Preference number: 2 (lower is better)
Translates to: SLVWRQFSIYQPVFEVTVEEYTI*SQKRLL
Trigger: AAGCAACCTTTTCTGACTGCATATGGTGTATTCCTC...GACCGTGACTTCAAATACAGGTTGATAAATGCTAAACTGTCTCCAAACCAGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000517311.5
ENST00000521688.6
ENST00000523335.1
3UTR-3UTR CCA 90 bp ATGATTGTTTTCATTGTGATAATAGGTAGCAGAATGATGAGCATCCCTATCACTGAAGAGAGTTCCAAGTaGCAGGATGGTCAACATTCG +
Preference number: 2 (lower is better)
Translates to: MIVFIVIIGSRMMSIPITEESSK*QDGQHS
Trigger: CGAATGTTGACCATCCTGCCACTTGGAACTCTCTTC...AGTGATAGGGATGCTCATCATTCTGCTACCTATTATCACAATGAAAACAATCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517311.5
ENST00000521688.6
3UTR-3UTR TCA 90 bp GTAGAGGTGGGGAGTTCTCAGCACTATCATTTTAAAGCTATGCTCTTTAGTATTCATTCAAAGTTCAGATaGGTAGAGTATGTGGAAGGA +
Preference number: 2 (lower is better)
Translates to: VEVGSSQHYHFKAMLFSIHSKFR*VEYVEG
Trigger: TCCTTCCACATACTCTACTCATCTGAACTTTGAATG...AATACTAAAGAGCATAGCTTTAAAATGATAGTGCTGAGAACTCCCCACCTCTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517311.5
ENST00000521688.6
3UTR-3UTR GCA 90 bp GTAGAGGTGGGGAGTTCTCAGCACTATCATTTTAAAGCTATGCTCTTTAGTATTGTTGAAGAGGAATTATaGATAGCTGCTTCTCACAGA +
Preference number: 2 (lower is better)
Translates to: VEVGSSQHYHFKAMLFSIVEEEL*IAASHR
Trigger: TCTGTGAGAAGCAGCTATGCATAATTCCTCTTCAAC...AATACTAAAGAGCATAGCTTTAAAATGATAGTGCTGAGAACTCCCCACCTCTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517311.5
ENST00000521688.6
3UTR-3UTR CCA 90 bp GAAATTGTCTCTCGAACCAAAGATCAATTTGAATCCTTTTCTCAACTATACCCAGGAAGGAGCTTGGTATaGAGCCAACTTGCAAATGTT +
Preference number: 2 (lower is better)
Translates to: EIVSRTKDQFESFSQLYPGRSLV*SQLANV
Trigger: AACATTTGCAAGTTGGCTCCATACCAAGCTCCTTCC...TGGGTATAGTTGAGAAAAGGATTCAAATTGATCTTTGGTTCGAGAGACAATTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517311.5
ENST00000521688.6
3UTR-3UTR CCA 90 bp CAGTACTATGAAATAAGAACTATCCGCTATTTCTCACCTTTCCTGTGTACTATTCTGACGCAAGTTTCCTaGGATTTGCTCAGGAAAAGT +
Preference number: 2 (lower is better)
Translates to: QYYEIRTIRYFSPFLCTILTQVS*DLLRKS
Trigger: ACTTTTCCTGAGCAAATCCCAGGAAACTTGCGTCAG...AATAGTACACAGGAAAGGTGAGAAATAGCGGATAGTTCTTATTTCATAGTACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517311.5
ENST00000521688.6
3UTR-3UTR CCA 90 bp GTCAGATCAAGAAGGGCCTATGTGTTAATGCTGAATGAGTTTCATTCTACATTGTGCTATATTCAGAAGTaGTTCTCAATCAGCAGCATG +
Preference number: 2 (lower is better)
Translates to: VRSRRAYVLMLNEFHSTLCYIQK*FSISSM
Trigger: CATGCTGCTGATTGAGAACCACTTCTGAATATAGCA...CAATGTAGAATGAAACTCATTCAGCATTAACACATAGGCCCTTCTTGATCTGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517311.5
ENST00000521688.6
3UTR-3UTR TCA 90 bp GAAATTGTCTCTCGAACCAAAGATCAATTTGAATCCTTTTCTCAACTATACCCAAGTTTCATTCTACATTaGGAAATTCCAAGCAGGGGA +
Preference number: 2 (lower is better)
Translates to: EIVSRTKDQFESFSQLYPSFILH*EIPSRG
Trigger: TCCCCTGCTTGGAATTTCTCAATGTAGAATGAAACT...TGGGTATAGTTGAGAAAAGGATTCAAATTGATCTTTGGTTCGAGAGACAATTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517311.5
ENST00000521688.6
3UTR-3UTR GCA 90 bp GAAATTGTCTCTCGAACCAAAGATCAATTTGAATCCTTTTCTCAACTATACCCAGGTATGGAGCCAACTTaGAAATGTTCTCTTCCATTA +
Preference number: 2 (lower is better)
Translates to: EIVSRTKDQFESFSQLYPGMEPT*KCSLPL
Trigger: TAATGGAAGAGAACATTTGCAAGTTGGCTCCATACC...TGGGTATAGTTGAGAAAAGGATTCAAATTGATCTTTGGTTCGAGAGACAATTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517311.5
ENST00000521688.6
3UTR-3UTR GCA 90 bp CAGTACTATGAAATAAGAACTATCCGCTATTTCTCACCTTTCCTGTGTACTATTTTTCCAGGAGAGGCCTaGAAAATTTCAAGAACTACT +
Preference number: 2 (lower is better)
Translates to: QYYEIRTIRYFSPFLCTIFPGEA*KISRTT
Trigger: AGTAGTTCTTGAAATTTTGCAGGCCTCTCCTGGAAA...AATAGTACACAGGAAAGGTGAGAAATAGCGGATAGTTCTTATTTCATAGTACTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000517311.5
ENST00000521688.6
3UTR-3UTR GCA 90 bp CAGTACTATGAAATAAGAACTATCCGCTATTTCTCACCTTTCCTGTGTACTATTGGAATTATGCATAGCTaGTTCTCACAGAAAAACAGT +
Preference number: 2 (lower is better)
Translates to: QYYEIRTIRYFSPFLCTIGIMHS*FSQKNS
Trigger: ACTGTTTTTCTGTGAGAAGCAGCTATGCATAATTCC...AATAGTACACAGGAAAGGTGAGAAATAGCGGATAGTTCTTATTTCATAGTACTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000517311.5
ENST00000521688.6
3UTR-3UTR CCA 90 bp ATGATTGTTTTCATTGTGATAATAGGTAGCAGAATGATGAGCATCCCTATCACTGGTAAAGCTAATGGGTaGAGATTAATTCCCATTAAG +
Preference number: 2 (lower is better)
Translates to: MIVFIVIIGSRMMSIPITGKANG*RLIPIK
Trigger: CTTAATGGGAATTAATCTCCACCCATTAGCTTTACC...AGTGATAGGGATGCTCATCATTCTGCTACCTATTATCACAATGAAAACAATCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517311.5
ENST00000521688.6
3UTR-3UTR CAA 90 bp GGAACTTCCAGTGGTAGCAAAAGCAATGTGAGGAGTGGGAAGAGAGTTCCAAGTGTATGTGGAAGGAGCTaGGTATGGAGCCAACTTGCA +
Preference number: 3 (lower is better)
Translates to: GTSSGSKSNVRSGKRVPSVCGRS*VWSQLA
Trigger: TGCAAGTTGGCTCCATACCAAGCTCCTTCCACATAC...ACTTGGAACTCTCTTCCCACTCCTCACATTGCTTTTGCTACCACTGGAAGTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000517311.5
ENST00000521688.6
ENST00000523335.1
3UTR-3UTR CAA 90 bp AAGTTTCCTGGGATTTGCTCAGGAAAAGTATATCCAGTTAGTGAGGCAGAGGGCAAGAGTCCATTGGATTaGGCAATCCTGATGTCAGGG +
Preference number: 3 (lower is better)
Translates to: KFPGICSGKVYPVSEAEGKSPLD*AILMSG
Trigger: CCCTGACATCAGGATTGCCAAATCCAATGGACTCTT...GCCCTCTGCCTCACTAACTGGATATACTTTTCCTGAGCAAATCCCAGGAAACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000517311.5
ENST00000521688.6
ENST00000523335.1
3UTR CCA 72 bp CAAAAGCAATGTGAGGAGTGGGAAGAGAGTTCCAAGTaGCAGGATGGTCAACATTCGCATTTTCCAGCAGAA +
Preference number: 3 (lower is better)
Translates to: QKQCEEWEESSK*QDGQHSHFPAE
Trigger: TTCTGCTGGAAAATGCGAATGTTGACCATCCTGCCACTTGGAACTCTCTTCCCACTCCTCACATTGCTTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000517311.5
ENST00000521688.6
ENST00000523335.1
3UTR-3UTR CAA 90 bp TCCTCCTTTCCAGGAGAGGCCTGCAAAATTTCAAGAACTACTGTGTTGAAGAGGTGGTATGGAGCCAACTaGCAAATGTTCTCTTCCATT +
Preference number: 3 (lower is better)
Translates to: SSFPGEACKISRTTVLKRWYGAN*QMFSSI
Trigger: AATGGAAGAGAACATTTGCAAGTTGGCTCCATACCA...CCTCTTCAACACAGTAGTTCTTGAAATTTTGCAGGCCTCTCCTGGAAAGGAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517311.5
ENST00000521688.6
3UTR TCA 72 bp CTTGCTATATTCAGAAGTGGTTCTCAATCAGCAGCATaGGCACCAGTTGGGTACTCGCCAGAAATACAGAAT +
Preference number: 3 (lower is better)
Translates to: LAIFRSGSQSAA*APVGYSPEIQN
Trigger: ATTCTGTATTTCTGGCGAGTACCCAACTGGTGCTCATGCTGCTGATTGAGAACCACTTCTGAATATAGCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517311.5
ENST00000521688.6
3UTR-3UTR CAA 90 bp TTACTAAGGCCACTTAGGCAACAGTGTGGAATAGATATTGGAGGGGTCACAGATCAAGTTTCCTGGGATTaGCTCAGGAAAAGTATATCC +
Preference number: 3 (lower is better)
Translates to: LLRPLRQQCGIDIGGVTDQVSWD*LRKSIS
Trigger: GGATATACTTTTCCTGAGCAAATCCCAGGAAACTTG...ATCTGTGACCCCTCCAATATCTATTCCACACTGTTGCCTAAGTGGCCTTAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517311.5
ENST00000521688.6
3UTR CCA 72 bp GTAGTGGATAATTTACAGCCTTGCTATATTCAGAAGTaGTTCTCAATCAGCAGCATGAGCACCAGTTGGGTA +
Preference number: 3 (lower is better)
Translates to: VVDNLQPCYIQK*FSISSMSTSWV
Trigger: TACCCAACTGGTGCTCATGCTGCTGATTGAGAACCACTTCTGAATATAGCAAGGCTGTAAATTATCCACTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517311.5
ENST00000521688.6
3UTR-3UTR CAA 90 bp AGTATGTGGAAGGAGCTTGGTATGGAGCCAACTTGCAAATGTTCTCTTCCATTATGCAGTCAGAAAAGGTaGCTTACTTCTCAGCTGTTA +
Preference number: 3 (lower is better)
Translates to: SMWKELGMEPTCKCSLPLCSQKR*LTSQLL
Trigger: TAACAGCTGAGAAGTAAGCAACCTTTTCTGACTGCA...TAATGGAAGAGAACATTTGCAAGTTGGCTCCATACCAAGCTCCTTCCACATACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000517311.5
ENST00000521688.6
ENST00000523335.1
3UTR-3UTR CAA 90 bp CCTTTTCTCAACTATACCCAATTTATACCTTTTCTCATACTCCCATACTGTTCAGTATGTGGAAGGAGCTaGGTATGGAGCCAACTTGCA +
Preference number: 3 (lower is better)
Translates to: PFLNYTQFIPFLILPYCSVCGRS*VWSQLA
Trigger: TGCAAGTTGGCTCCATACCAAGCTCCTTCCACATAC...TGAACAGTATGGGAGTATGAGAAAAGGTATAAATTGGGTATAGTTGAGAAAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517311.5
ENST00000521688.6
3UTR-3UTR CAA 90 bp AGATACAAACTAGAGAACATTTGTAAGTTGTCAAAGAAGCCTACAGGTGGTGGGTTTATCAACCTGTATTaGAAGTCACGGTCTGACGCA +
Preference number: 3 (lower is better)
Translates to: RYKLENICKLSKKPTGGGFINLY*KSRSDA
Trigger: TGCGTCAGACCGTGACTTCAAATACAGGTTGATAAA...CCCACCACCTGTAGGCTTCTTTGACAACTTACAAATGTTCTCTAGTTTGTATCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517311.5
ENST00000521688.6
3UTR-3UTR CAA 90 bp GTAGAGGTGGGGAGTTCTCAGCACTATCATTTTAAAGCTATGCTCTTTAGTATTTGCAGTCAGAAAAGGTaGCTTACTTCTCAGCTGTTA +
Preference number: 3 (lower is better)
Translates to: VEVGSSQHYHFKAMLFSICSQKR*LTSQLL
Trigger: TAACAGCTGAGAAGTAAGCAACCTTTTCTGACTGCA...AATACTAAAGAGCATAGCTTTAAAATGATAGTGCTGAGAACTCCCCACCTCTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000517311.5
ENST00000521688.6
3UTR-3UTR CAA 90 bp ATAGCTAGGAGGTACCATTCAGAAATAAGGAATATAGCAGGGGCAATTATTGGGCCATTAAGTTCTTTCTaGACCTTAGTATGTGGGGTT +
Preference number: 3 (lower is better)
Translates to: IARRYHSEIRNIAGAIIGPLSSF*TLVCGV
Trigger: AACCCCACATACTAAGGTCAAGAAAGAACTTAATGG...CCCAATAATTGCCCCTGCTATATTCCTTATTTCTGAATGGTACCTCCTAGCTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517311.5
ENST00000521688.6
3UTR TCA 72 bp TTTAGCATTTATCAACCTGTATTTGAAGTCACGGTCTaGCGCAAGTTTCCTGGGATTTGCTCAGGAAAAGTA +
Preference number: 3 (lower is better)
Translates to: FSIYQPVFEVTV*RKFPGICSGKV
Trigger: TACTTTTCCTGAGCAAATCCCAGGAAACTTGCGTCAGACCGTGACTTCAAATACAGGTTGATAAATGCTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000517311.5
ENST00000521688.6
ENST00000523335.1
3UTR-3UTR CAA 90 bp GTCAGATCAAGAAGGGCCTATGTGTTAATGCTGAATGAGTTTCATTCTACATTGCCATTAAGTTCTTTCTaGACCTTAGTATGTGGGGTT +
Preference number: 3 (lower is better)
Translates to: VRSRRAYVLMLNEFHSTLPLSSF*TLVCGV
Trigger: AACCCCACATACTAAGGTCAAGAAAGAACTTAATGG...CAATGTAGAATGAAACTCATTCAGCATTAACACATAGGCCCTTCTTGATCTGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517311.5
ENST00000521688.6
3UTR-3UTR CAA 90 bp CCTTTTCTCAACTATACCCAATTTATACCTTTTCTCATACTCCCATACTGTTCAGAGTTTCATTCTACATaGAGAAATTCCAAGCAGGGG +
Preference number: 3 (lower is better)
Translates to: PFLNYTQFIPFLILPYCSEFHST*RNSKQG
Trigger: CCCCTGCTTGGAATTTCTCAATGTAGAATGAAACTC...TGAACAGTATGGGAGTATGAGAAAAGGTATAAATTGGGTATAGTTGAGAAAAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517311.5
ENST00000521688.6
3UTR CCA 72 bp ATCTCAGGCTCAAAACTTTACATAATTAAGCCCAGCTaGTTCAAAGACTACACTTTAAATTCATCAGAAAGA +
Preference number: 3 (lower is better)
Translates to: ISGSKLYIIKPS*FKDYTLNSSER
Trigger: TCTTTCTGATGAATTTAAAGTGTAGTCTTTGAACCAGCTGGGCTTAATTATGTAAAGTTTTGAGCCTGAGAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517311.5
ENST00000521688.6
CDS-3UTR GCA 90 bp GAGGAGTGGGAAGAGAGTTCCAAGTGGCAGGATGGTCAACATTCGCATTTTCCACGACGAAATGACCCTTaGGCTGAGGACCGTTACCTA +
Preference number: 4 (lower is better)
Translates to: EEWEESSKWQDGQHSHFPRRNDP*AEDRYL
Trigger: TAGGTAACGGTCCTCAGCGCAAGGGTCATTTCGTCG...TGGAAAATGCGAATGTTGACCATCCTGCCACTTGGAACTCTCTTCCCACTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000517311.5
ENST00000521688.6
ENST00000523335.1
CDS-3UTR GCA 90 bp GAGCACCAGTTGGGTACTCGCCAGAAATACAGAATCTTAAAGCCATGCCCCTTACGACGAAATGACCCTTaGGCTGAGGACCGTTACCTA +
Preference number: 4 (lower is better)
Translates to: EHQLGTRQKYRILKPCPLRRNDP*AEDRYL
Trigger: TAGGTAACGGTCCTCAGCGCAAGGGTCATTTCGTCG...TAAGGGGCATGGCTTTAAGATTCTGTATTTCTGGCGAGTACCCAACTGGTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517311.5
ENST00000521688.6
CDS-3UTR CCA 90 bp AAGTTTCCTGGGATTTGCTCAGGAAAAGTATATCCAGTTAGTGAGGCAGAGGGCTTGATCCATAGCAGTTaGGTGTCTGGGTGTGGAGGC +
Preference number: 4 (lower is better)
Translates to: KFPGICSGKVYPVSEAEGLIHSS*VSGCGG
Trigger: GCCTCCACACCCAGACACCCAACTGCTATGGATCAA...GCCCTCTGCCTCACTAACTGGATATACTTTTCCTGAGCAAATCCCAGGAAACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000517311.5
ENST00000521688.6
ENST00000523335.1
CDS-3UTR CCA 90 bp CAGTCAGAAAAGGTTGCTTACTTCTCAGCTGTTAACACAGAGAACTGTACATACCCAGGGTGTGTTGGCTaGGTACGATGGCTCACGCCT +
Preference number: 4 (lower is better)
Translates to: QSEKVAYFSAVNTENCTYPGCVG*VRWLTP
Trigger: AGGCGTGAGCCATCGTACCCAGCCAACACACCCTGG...GTATGTACAGTTCTCTGTGTTAACAGCTGAGAAGTAAGCAACCTTTTCTGACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520147.5
CDS-3UTR TCA 90 bp TCCTCCTTTCCAGGAGAGGCCTGCAAAATTTCAAGAACTACTGTGTTGAAGAGGCAGTGTGCCTTCAACTaGTCCTTCCAGCCACATTCA +
Preference number: 4 (lower is better)
Translates to: SSFPGEACKISRTTVLKRQCAFN*SFQPHS
Trigger: TGAATGTGGCTGGAAGGATCAGTTGAAGGCACACTG...CCTCTTCAACACAGTAGTTCTTGAAATTTTGCAGGCCTCTCCTGGAAAGGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517311.5
ENST00000521688.6
CDS-3UTR CCA 90 bp GAGGAGTGGGAAGAGAGTTCCAAGTGGCAGGATGGTCAACATTCGCATTTTCCATATGTGGAAGGAGCTTaGTATGGAGCCAACTTGCAA +
Preference number: 4 (lower is better)
Translates to: EEWEESSKWQDGQHSHFPYVEGA*YGANLQ
Trigger: TTGCAAGTTGGCTCCATACCAAGCTCCTTCCACATA...TGGAAAATGCGAATGTTGACCATCCTGCCACTTGGAACTCTCTTCCCACTCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000517311.5
ENST00000521688.6
ENST00000523335.1
CDS-3UTR GCA 90 bp ACTCAAAAGAGGAATACACCATATGCAGTCAGAAAAGGTTGCTTACTTCTCAGCTTGAGGCAGGAGGATTaGCTGAGTCCGGGAGCTCAA +
Preference number: 4 (lower is better)
Translates to: TQKRNTPYAVRKGCLLLSLRQED*LSPGAQ
Trigger: TTGAGCTCCCGGACTCAGGCAATCCTCCTGCCTCAA...GCTGAGAAGTAAGCAACCTTTTCTGACTGCATATGGTGTATTCCTCTTTTGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520147.5
CDS-3UTR CCA 90 bp GGAACTTCCAGTGGTAGCAAAAGCAATGTGAGGAGTGGGAAGAGAGTTCCAAGTGGAAGGAGCTTGGTATaGAGCCAACTTGCAAATGTT +
Preference number: 4 (lower is better)
Translates to: GTSSGSKSNVRSGKRVPSGRSLV*SQLANV
Trigger: AACATTTGCAAGTTGGCTCCATACCAAGCTCCTTCC...ACTTGGAACTCTCTTCCCACTCCTCACATTGCTTTTGCTACCACTGGAAGTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000517311.5
ENST00000521688.6
ENST00000523335.1
CDS-3UTR CCA 90 bp GAGCACCAGTTGGGTACTCGCCAGAAATACAGAATCTTAAAGCCATGCCCCTTATATGTGGAAGGAGCTTaGTATGGAGCCAACTTGCAA +
Preference number: 4 (lower is better)
Translates to: EHQLGTRQKYRILKPCPLYVEGA*YGANLQ
Trigger: TTGCAAGTTGGCTCCATACCAAGCTCCTTCCACATA...TAAGGGGCATGGCTTTAAGATTCTGTATTTCTGGCGAGTACCCAACTGGTGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517311.5
ENST00000521688.6
CDS-3UTR CCA 90 bp CACCAGTTGGGTACTCGCCAGAAATACAGAATCTTAAAGCCATGCCCCTTATCTGAAGAGAGTTCCAAGTaGCAGGATGGTCAACATTCG +
Preference number: 4 (lower is better)
Translates to: HQLGTRQKYRILKPCPLSEESSK*QDGQHS
Trigger: CGAATGTTGACCATCCTGCCACTTGGAACTCTCTTC...AGATAAGGGGCATGGCTTTAAGATTCTGTATTTCTGGCGAGTACCCAACTGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517311.5
ENST00000521688.6
CDS-3UTR CCA 90 bp TCCTCCTTTCCAGGAGAGGCCTGCAAAATTTCAAGAACTACTGTGTTGAAGAGGGAAGAGAGTTCCAAGTaGCAGGATGGTCAACATTCG +
Preference number: 4 (lower is better)
Translates to: SSFPGEACKISRTTVLKREESSK*QDGQHS
Trigger: CGAATGTTGACCATCCTGCCACTTGGAACTCTCTTC...CCTCTTCAACACAGTAGTTCTTGAAATTTTGCAGGCCTCTCCTGGAAAGGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517311.5
ENST00000521688.6
CDS-3UTR CCA 90 bp TCCTCCTTTCCAGGAGAGGCCTGCAAAATTTCAAGAACTACTGTGTTGAAGAGGAAGCAATGTGAGGAGTaGGAAGAGAGTTCCAAGTGG +
Preference number: 4 (lower is better)
Translates to: SSFPGEACKISRTTVLKRKQCEE*EESSKW
Trigger: CCACTTGGAACTCTCTTCCCACTCCTCACATTGCTT...CCTCTTCAACACAGTAGTTCTTGAAATTTTGCAGGCCTCTCCTGGAAAGGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517311.5
ENST00000521688.6
CDS-3UTR CCA 90 bp CAGTCAGAAAAGGTTGCTTACTTCTCAGCTGTTAACACAGAGAACTGTACATACGTCATCCCAGCAGTCTaGAAGGTTGAGGCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: QSEKVAYFSAVNTENCTYVIPAV*KVEAGG
Trigger: TCCTCCTGCCTCAACCTTCCAGACTGCTGGGATGAC...GTATGTACAGTTCTCTGTGTTAACAGCTGAGAAGTAAGCAACCTTTTCTGACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520147.5
CDS-3UTR TCA 90 bp GAGCACCAGTTGGGTACTCGCCAGAAATACAGAATCTTAAAGCCATGCCCCTTATGGATTTGGCAATCCTaGTGTCAGGGTAAAGCTAAT +
Preference number: 4 (lower is better)
Translates to: EHQLGTRQKYRILKPCPLWIWQS*CQGKAN
Trigger: ATTAGCTTTACCCTGACATCAGGATTGCCAAATCCA...TAAGGGGCATGGCTTTAAGATTCTGTATTTCTGGCGAGTACCCAACTGGTGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517311.5
ENST00000521688.6
CDS-3UTR TCA 90 bp GACTCAAAAGAGGAATACACCATATGCAGTCAGAAAAGGTTGCTTACTTCTCAGTCTCAATCAGCAGCATaGGCACCAGTTGGGTACTCG +
Preference number: 4 (lower is better)
Translates to: DSKEEYTICSQKRLLTSQSQSAA*APVGYS
Trigger: CGAGTACCCAACTGGTGCTCATGCTGCTGATTGAGA...CTGAGAAGTAAGCAACCTTTTCTGACTGCATATGGTGTATTCCTCTTTTGAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517311.5
ENST00000521688.6
CDS-3UTR TCA 90 bp AGATACAAACTAGAGAACATTTGTAAGTTGTCAAAGAAGCCTACAGGTGGTGGGTCTCAATCAGCAGCATaGGCACCAGTTGGGTACTCG +
Preference number: 4 (lower is better)
Translates to: RYKLENICKLSKKPTGGGSQSAA*APVGYS
Trigger: CGAGTACCCAACTGGTGCTCATGCTGCTGATTGAGA...CCCACCACCTGTAGGCTTCTTTGACAACTTACAAATGTTCTCTAGTTTGTATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517311.5
ENST00000521688.6
CDS-3UTR TCA 90 bp TATATTCAGAAGTGGTTCTCAATCAGCAGCATGAGCACCAGTTGGGTACTCGCCAAAGGTACTTACGGATaGAACAACTTCATAGTGGGG +
Preference number: 4 (lower is better)
Translates to: YIQKWFSISSMSTSWVLAKGTYG*NNFIVG
Trigger: CCCCACTATGAAGTTGTTTCATCCGTAAGTACCTTT...GGCGAGTACCCAACTGGTGCTCATGCTGCTGATTGAGAACCACTTCTGAATATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517311.5
ENST00000521688.6
CDS-3UTR GCA 90 bp TCAGAAGTGGTTCTCAATCAGCAGCATGAGCACCAGTTGGGTACTCGCCAGAAAGAGGAATACACCATATaGAGTCAGAAAAGGTTGCTT +
Preference number: 4 (lower is better)
Translates to: SEVVLNQQHEHQLGTRQKEEYTI*SQKRLL
Trigger: AAGCAACCTTTTCTGACTGCATATGGTGTATTCCTC...TTTCTGGCGAGTACCCAACTGGTGCTCATGCTGCTGATTGAGAACCACTTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517311.5
ENST00000521688.6
CDS-3UTR GCA 90 bp GACTCAAAAGAGGAATACACCATATGCAGTCAGAAAAGGTTGCTTACTTCTCAGCGACGAAATGACCCTTaGGCTGAGGACCGTTACCTA +
Preference number: 4 (lower is better)
Translates to: DSKEEYTICSQKRLLTSQRRNDP*AEDRYL
Trigger: TAGGTAACGGTCCTCAGCGCAAGGGTCATTTCGTCG...CTGAGAAGTAAGCAACCTTTTCTGACTGCATATGGTGTATTCCTCTTTTGAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000517311.5
ENST00000521688.6
ENST00000523335.1
CDS-3UTR CCA 90 bp TCTACAAGTCCCAGACAGCAAAAGGTACTCCACAAGAAACAGAAGGAACTTCCAAAGCAATGTGAGGAGTaGGAAGAGAGTTCCAAGTGG +
Preference number: 4 (lower is better)
Translates to: STSPRQQKVLHKKQKELPKQCEE*EESSKW
Trigger: CCACTTGGAACTCTCTTCCCACTCCTCACATTGCTT...TGGAAGTTCCTTCTGTTTCTTGTGGAGTACCTTTTGCTGTCTGGGACTTGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000517311.5
ENST00000521688.6
ENST00000523335.1
CDS-3UTR CCA 90 bp GACGCAAGTTTCCTGGGATTTGCTCAGGAAAAGTATATCCAGTTAGTGAGGCAGCTGACGCAAGTTTCCTaGGATTTGCTCAGGAAAAGT +
Preference number: 4 (lower is better)
Translates to: DASFLGFAQEKYIQLVRQLTQVS*DLLRKS
Trigger: ACTTTTCCTGAGCAAATCCCAGGAAACTTGCGTCAG...CTGCCTCACTAACTGGATATACTTTTCCTGAGCAAATCCCAGGAAACTTGCGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000517311.5
ENST00000521688.6
ENST00000523335.1
3UTR CAA 72 bp TCAGAAGTGGTTCTCAATCAGCAGCATGAGCACCAGTaGGGTACTCGCCAGAAATACAGAATCTTAAAGCCA +
Preference number: 4 (lower is better)
Translates to: SEVVLNQQHEHQ*GTRQKYRILKP
Trigger: TGGCTTTAAGATTCTGTATTTCTGGCGAGTACCCAACTGGTGCTCATGCTGCTGATTGAGAACCACTTCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517311.5
ENST00000521688.6
CDS-3UTR TCA 90 bp ACTCAAAAGAGGAATACACCATATGCAGTCAGAAAAGGTTGCTTACTTCTCAGCCAGTGTGCCTTCAACTaGTCCTTCCAGCCACATTCA +
Preference number: 4 (lower is better)
Translates to: TQKRNTPYAVRKGCLLLSQCAFN*SFQPHS
Trigger: TGAATGTGGCTGGAAGGATCAGTTGAAGGCACACTG...GCTGAGAAGTAAGCAACCTTTTCTGACTGCATATGGTGTATTCCTCTTTTGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000517311.5
ENST00000520147.5
ENST00000521688.6
ENST00000523335.1
CDS-3UTR TCA 90 bp GTTCCAAGTGGCAGGATGGTCAACATTCGCATTTTCCAGCAGAAGTCACGTAAGAGTTTCATTCTACATTaGGAAATTCCAAGCAGGGGA +
Preference number: 4 (lower is better)
Translates to: VPSGRMVNIRIFQQKSRKSFILH*EIPSRG
Trigger: TCCCCTGCTTGGAATTTCTCAATGTAGAATGAAACT...CTTACGTGACTTCTGCTGGAAAATGCGAATGTTGACCATCCTGCCACTTGGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517311.5
ENST00000521688.6
CDS-3UTR TCA 90 bp TTACTAAGGCCACTTAGGCAACAGTGTGGAATAGATATTGGAGGGGTCACAGATACTAAAGCTGAACTCTaGAGGGCAAACAGGAATGAG +
Preference number: 4 (lower is better)
Translates to: LLRPLRQQCGIDIGGVTDTKAEL*RANRNE
Trigger: CTCATTCCTGTTTGCCCTTCAGAGTTCAGCTTTAGT...ATCTGTGACCCCTCCAATATCTATTCCACACTGTTGCCTAAGTGGCCTTAGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517311.5
ENST00000521688.6
CDS-3UTR GCA 90 bp GGAACTTCCAGTGGTAGCAAAAGCAATGTGAGGAGTGGGAAGAGAGTTCCAAGTGGTATGGAGCCAACTTaGAAATGTTCTCTTCCATTA +
Preference number: 4 (lower is better)
Translates to: GTSSGSKSNVRSGKRVPSGMEPT*KCSLPL
Trigger: TAATGGAAGAGAACATTTGCAAGTTGGCTCCATACC...ACTTGGAACTCTCTTCCCACTCCTCACATTGCTTTTGCTACCACTGGAAGTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000517311.5
ENST00000521688.6
ENST00000523335.1
CDS-3UTR GCA 90 bp GGAACTTCCAGTGGTAGCAAAAGCAATGTGAGGAGTGGGAAGAGAGTTCCAAGTGTTGAAGAGGAATTATaGATAGCTGCTTCTCACAGA +
Preference number: 4 (lower is better)
Translates to: GTSSGSKSNVRSGKRVPSVEEEL*IAASHR
Trigger: TCTGTGAGAAGCAGCTATGCATAATTCCTCTTCAAC...ACTTGGAACTCTCTTCCCACTCCTCACATTGCTTTTGCTACCACTGGAAGTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517311.5
ENST00000521688.6
CDS-3UTR CCA 90 bp TCTACAAGTCCCAGACAGCAAAAGGTACTCCACAAGAAACAGAAGGAACTTCCAGGAAGGAGCTTGGTATaGAGCCAACTTGCAAATGTT +
Preference number: 4 (lower is better)
Translates to: STSPRQQKVLHKKQKELPGRSLV*SQLANV
Trigger: AACATTTGCAAGTTGGCTCCATACCAAGCTCCTTCC...TGGAAGTTCCTTCTGTTTCTTGTGGAGTACCTTTTGCTGTCTGGGACTTGTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000517311.5
ENST00000521688.6
ENST00000523335.1
CDS-3UTR CCA 90 bp AGTATGTGGAAGGAGCTTGGTATGGAGCCAACTTGCAAATGTTCTCTTCCATTAGAAGAGAGTTCCAAGTaGCAGGATGGTCAACATTCG +
Preference number: 4 (lower is better)
Translates to: SMWKELGMEPTCKCSLPLEESSK*QDGQHS
Trigger: CGAATGTTGACCATCCTGCCACTTGGAACTCTCTTC...TAATGGAAGAGAACATTTGCAAGTTGGCTCCATACCAAGCTCCTTCCACATACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000517311.5
ENST00000521688.6
ENST00000523335.1
CDS-3UTR CCA 90 bp CAAGTGGCAGGATGGTCAACATTCGCATTTTCCAGCAGAAGTCACGTAAGAATACTGACGCAAGTTTCCTaGGATTTGCTCAGGAAAAGT +
Preference number: 4 (lower is better)
Translates to: QVAGWSTFAFSSRSHVRILTQVS*DLLRKS
Trigger: ACTTTTCCTGAGCAAATCCCAGGAAACTTGCGTCAG...TATTCTTACGTGACTTCTGCTGGAAAATGCGAATGTTGACCATCCTGCCACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000517311.5
ENST00000521688.6
ENST00000523335.1
CDS-3UTR CCA 90 bp GAGCTTGGTATGGAGCCAACTTGCAAATGTTCTCTTCCATTAGATGGTAAATTCGAGAAAGGGGGCTTCTaGGTTCAAAGGTACTTACGG +
Preference number: 4 (lower is better)
Translates to: ELGMEPTCKCSLPLDGKFEKGGF*VQRYLR
Trigger: CCGTAAGTACCTTTGAACCCAGAAGCCCCCTTTCTC...GAATTTACCATCTAATGGAAGAGAACATTTGCAAGTTGGCTCCATACCAAGCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000517311.5
ENST00000521688.6
CDS-3UTR TCA 90 bp AAGTTTCCTGGGATTTGCTCAGGAAAAGTATATCCAGTTAGTGAGGCAGAGGGCCATTCAAAGTTCAGATaGGTAGAGTATGTGGAAGGA +
Preference number: 4 (lower is better)
Translates to: KFPGICSGKVYPVSEAEGHSKFR*VEYVEG
Trigger: TCCTTCCACATACTCTACTCATCTGAACTTTGAATG...GCCCTCTGCCTCACTAACTGGATATACTTTTCCTGAGCAAATCCCAGGAAACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000517311.5
ENST00000521688.6
ENST00000523335.1
CDS-3UTR GCA 90 bp AAGTTTCCTGGGATTTGCTCAGGAAAAGTATATCCAGTTAGTGAGGCAGAGGGCATTACCTTTACAGTGTaGCTTCAACTGATCCTTCCA +
Preference number: 4 (lower is better)
Translates to: KFPGICSGKVYPVSEAEGITFTV*LQLILP
Trigger: TGGAAGGATCAGTTGAAGGCACACTGTAAAGGTAAT...GCCCTCTGCCTCACTAACTGGATATACTTTTCCTGAGCAAATCCCAGGAAACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523335.1
CDS-3UTR CCA 90 bp ACCATATGCAGTCAGAAAAGGTTGCTTACTTCTCAGCTGTTAACACAGAGAACTAAGCAATGTGAGGAGTaGGAAGAGAGTTCCAAGTGG +
Preference number: 4 (lower is better)
Translates to: TICSQKRLLTSQLLTQRTKQCEE*EESSKW
Trigger: CCACTTGGAACTCTCTTCCCACTCCTCACATTGCTT...AGTTCTCTGTGTTAACAGCTGAGAAGTAAGCAACCTTTTCTGACTGCATATGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000517311.5
ENST00000521688.6
ENST00000523335.1
CDS-3UTR CCA 90 bp GTCAGATCAAGAAGGGCCTATGTGTTAATGCTGAATGAGTTTCATTCTACATTGGAGAAAGGGGGCTTCTaGGTTCAAAGGTACTTACGG +
Preference number: 4 (lower is better)
Translates to: VRSRRAYVLMLNEFHSTLEKGGF*VQRYLR
Trigger: CCGTAAGTACCTTTGAACCCAGAAGCCCCCTTTCTC...CAATGTAGAATGAAACTCATTCAGCATTAACACATAGGCCCTTCTTGATCTGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000517311.5
ENST00000521688.6
CDS-3UTR TCA 90 bp CAAGTGGCAGGATGGTCAACATTCGCATTTTCCAGCAGAAGTCACGTAAGAATACATTCAAAGTTCAGATaGGTAGAGTATGTGGAAGGA +
Preference number: 4 (lower is better)
Translates to: QVAGWSTFAFSSRSHVRIHSKFR*VEYVEG
Trigger: TCCTTCCACATACTCTACTCATCTGAACTTTGAATG...TATTCTTACGTGACTTCTGCTGGAAAATGCGAATGTTGACCATCCTGCCACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000517311.5
ENST00000521688.6
ENST00000523335.1
CDS-3UTR TCA 90 bp TTAGCATTTATCAACCTGTATTTGAAGTCACGGTCTGACGCAAGTTTCCTGGGAAAAGGTACTTACGGATaGAACAACTTCATAGTGGGG +
Preference number: 4 (lower is better)
Translates to: LAFINLYLKSRSDASFLGKGTYG*NNFIVG
Trigger: CCCCACTATGAAGTTGTTTCATCCGTAAGTACCTTT...TCCCAGGAAACTTGCGTCAGACCGTGACTTCAAATACAGGTTGATAAATGCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517311.5
ENST00000521688.6
CDS-3UTR GCA 90 bp GAGCACCAGTTGGGTACTCGCCAGAAATACAGAATCTTAAAGCCATGCCCCTTACTTAGTATGTGGGGTTaGAATTTAAAGATTCTGCAT +
Preference number: 4 (lower is better)
Translates to: EHQLGTRQKYRILKPCPLLSMWG*NLKILH
Trigger: ATGCAGAATCTTTAAATTGCAACCCCACATACTAAG...TAAGGGGCATGGCTTTAAGATTCTGTATTTCTGGCGAGTACCCAACTGGTGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517311.5
ENST00000521688.6
CDS-3UTR CCA 90 bp CAGTACTATGAAATAAGAACTATCCGCTATTTCTCACCTTTCCTGTGTACTATTTTGATCCATAGCAGTTaGGTGTCTGGGTGTGGAGGC +
Preference number: 4 (lower is better)
Translates to: QYYEIRTIRYFSPFLCTILIHSS*VSGCGG
Trigger: GCCTCCACACCCAGACACCCAACTGCTATGGATCAA...AATAGTACACAGGAAAGGTGAGAAATAGCGGATAGTTCTTATTTCATAGTACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517311.5
ENST00000521688.6
CDS-3UTR CCA 90 bp GAGTATGTGGAAGGAGCTTGGTATGGAGCCAACTTGCAAATGTTCTCTTCCATTTGCTATATTCAGAAGTaGTTCTCAATCAGCAGCATG +
Preference number: 4 (lower is better)
Translates to: EYVEGAWYGANLQMFSSICYIQK*FSISSM
Trigger: CATGCTGCTGATTGAGAACCACTTCTGAATATAGCA...AATGGAAGAGAACATTTGCAAGTTGGCTCCATACCAAGCTCCTTCCACATACTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517311.5
ENST00000521688.6
3UTR CAA 72 bp TTCAAAGTTCAGATGAGTAGAGTATGTGGAAGGAGCTaGGTATGGAGCCAACTTGCAAATGTTCTCTTCCAT +
Preference number: 4 (lower is better)
Translates to: FKVQMSRVCGRS*VWSQLANVLFH
Trigger: ATGGAAGAGAACATTTGCAAGTTGGCTCCATACCAAGCTCCTTCCACATACTCTACTCATCTGAACTTTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000517311.5
ENST00000521688.6
ENST00000523335.1
3UTR CAA 72 bp TGGTTTGGAGACAGTTTAGCATTTATCAACCTGTATTaGAAGTCACGGTCTGACGCAAGTTTCCTGGGATTT +
Preference number: 4 (lower is better)
Translates to: WFGDSLAFINLY*KSRSDASFLGF
Trigger: AAATCCCAGGAAACTTGCGTCAGACCGTGACTTCAAATACAGGTTGATAAATGCTAAACTGTCTCCAAACCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000517311.5
ENST00000521688.6
ENST00000523335.1
CDS-3UTR TCA 90 bp CAAGTGGCAGGATGGTCAACATTCGCATTTTCCAGCAGAAGTCACGTAAGAATAGATATTCTAAAAAGTTaGTCCATAGCAGTTGGGTGT +
Preference number: 4 (lower is better)
Translates to: QVAGWSTFAFSSRSHVRIDILKS*SIAVGC
Trigger: ACACCCAACTGCTATGGATCAACTTTTTAGAATATC...TATTCTTACGTGACTTCTGCTGGAAAATGCGAATGTTGACCATCCTGCCACTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000517311.5
ENST00000521688.6
ENST00000523335.1
CDS-3UTR TCA 90 bp GTCAGATCAAGAAGGGCCTATGTGTTAATGCTGAATGAGTTTCATTCTACATTGACTAAAGCTGAACTCTaGAGGGCAAACAGGAATGAG +
Preference number: 4 (lower is better)
Translates to: VRSRRAYVLMLNEFHSTLTKAEL*RANRNE
Trigger: CTCATTCCTGTTTGCCCTTCAGAGTTCAGCTTTAGT...CAATGTAGAATGAAACTCATTCAGCATTAACACATAGGCCCTTCTTGATCTGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517311.5
ENST00000521688.6
CDS-3UTR GCA 90 bp GAGTATGTGGAAGGAGCTTGGTATGGAGCCAACTTGCAAATGTTCTCTTCCATTGGAATTATGCATAGCTaGTTCTCACAGAAAAACAGT +
Preference number: 4 (lower is better)
Translates to: EYVEGAWYGANLQMFSSIGIMHS*FSQKNS
Trigger: ACTGTTTTTCTGTGAGAAGCAGCTATGCATAATTCC...AATGGAAGAGAACATTTGCAAGTTGGCTCCATACCAAGCTCCTTCCACATACTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000517311.5
ENST00000521688.6
CDS-3UTR GCA 90 bp ACCATATGCAGTCAGAAAAGGTTGCTTACTTCTCAGCTGTTAACACAGAGAACTTACCTCTTTACAGTGTaGCTTCAACTGATCCTTCCA +
Preference number: 4 (lower is better)
Translates to: TICSQKRLLTSQLLTQRTYLFTV*LQLILP
Trigger: TGGAAGGATCAGTTGAAGGCACACTGTAAAGAGGTA...AGTTCTCTGTGTTAACAGCTGAGAAGTAAGCAACCTTTTCTGACTGCATATGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000520147.5
ENST00000521688.6
CDS-3UTR GCA 90 bp GAGCTTGGTATGGAGCCAACTTGCAAATGTTCTCTTCCATTAGATGGTAAATTCTACCTCTTTACAGTGTaGCTTCAACTGATCCTTCCA +
Preference number: 4 (lower is better)
Translates to: ELGMEPTCKCSLPLDGKFYLFTV*LQLILP
Trigger: TGGAAGGATCAGTTGAAGGCACACTGTAAAGAGGTA...GAATTTACCATCTAATGGAAGAGAACATTTGCAAGTTGGCTCCATACCAAGCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521688.6
CDS-3UTR CCA 90 bp GTCAGATCAAGAAGGGCCTATGTGTTAATGCTGAATGAGTTTCATTCTACATTGGGAAGGAGCTTGGTATaGAGCCAACTTGCAAATGTT +
Preference number: 4 (lower is better)
Translates to: VRSRRAYVLMLNEFHSTLGRSLV*SQLANV
Trigger: AACATTTGCAAGTTGGCTCCATACCAAGCTCCTTCC...CAATGTAGAATGAAACTCATTCAGCATTAACACATAGGCCCTTCTTGATCTGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517311.5
ENST00000521688.6
CDS-3UTR TCA 90 bp GACTCAAAAGAGGAATACACCATATGCAGTCAGAAAAGGTTGCTTACTTCTCAGAGTTTCATTCTACATTaGGAAATTCCAAGCAGGGGA +
Preference number: 4 (lower is better)
Translates to: DSKEEYTICSQKRLLTSQSFILH*EIPSRG
Trigger: TCCCCTGCTTGGAATTTCTCAATGTAGAATGAAACT...CTGAGAAGTAAGCAACCTTTTCTGACTGCATATGGTGTATTCCTCTTTTGAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000517311.5
ENST00000521688.6
CDS-3UTR TCA 90 bp ATTATCTACAAGTCCCAGACAGCAAAAGGTACTCCACAAGAAACAGAAGGAACTCAAGAACTACTGTGTTaGAGAGGAATTATGCATAGC +
Preference number: 4 (lower is better)
Translates to: IIYKSQTAKGTPQETEGTQELLC*RGIMHS
Trigger: GCTATGCATAATTCCTCTTCAACACAGTAGTTCTTG...AGTTCCTTCTGTTTCTTGTGGAGTACCTTTTGCTGTCTGGGACTTGTAGATAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517311.5
ENST00000521688.6
CDS-3UTR TCA 90 bp AGTCTGGTTTGGAGACAGTTTAGCATTTATCAACCTGTATTTGAAGTCACGGTCCAAGAACTACTGTGTTaGAGAGGAATTATGCATAGC +
Preference number: 4 (lower is better)
Translates to: SLVWRQFSIYQPVFEVTVQELLC*RGIMHS
Trigger: GCTATGCATAATTCCTCTTCAACACAGTAGTTCTTG...GACCGTGACTTCAAATACAGGTTGATAAATGCTAAACTGTCTCCAAACCAGACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517311.5
ENST00000521688.6
CDS-3UTR GCA 90 bp GGACTCAAAAGAGGAATACACCATATGCAGTCAGAAAAGGTTGCTTACTTCTCAGAGGAATACACCATATaGAGTCAGAAAAGGTTGCTT +
Preference number: 4 (lower is better)
Translates to: GLKRGIHHMQSEKVAYFSEEYTI*SQKRLL
Trigger: AAGCAACCTTTTCTGACTGCATATGGTGTATTCCTC...TGAGAAGTAAGCAACCTTTTCTGACTGCATATGGTGTATTCCTCTTTTGAGTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000517311.5
ENST00000520147.5
ENST00000521688.6
ENST00000523335.1
CDS-3UTR GCA 90 bp GGACTCAAAAGAGGAATACACCATATGCAGTCAGAAAAGGTTGCTTACTTCTCAGGTATGGAGCCAACTTaGAAATGTTCTCTTCCATTA +
Preference number: 4 (lower is better)
Translates to: GLKRGIHHMQSEKVAYFSGMEPT*KCSLPL
Trigger: TAATGGAAGAGAACATTTGCAAGTTGGCTCCATACC...TGAGAAGTAAGCAACCTTTTCTGACTGCATATGGTGTATTCCTCTTTTGAGTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000517311.5
ENST00000521688.6
ENST00000523335.1
CDS-3UTR GCA 90 bp TCTACAAGTCCCAGACAGCAAAAGGTACTCCACAAGAAACAGAAGGAACTTCCACTTAGTATGTGGGGTTaGAATTTAAAGATTCTGCAT +
Preference number: 4 (lower is better)
Translates to: STSPRQQKVLHKKQKELPLSMWG*NLKILH
Trigger: ATGCAGAATCTTTAAATTGCAACCCCACATACTAAG...TGGAAGTTCCTTCTGTTTCTTGTGGAGTACCTTTTGCTGTCTGGGACTTGTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000517311.5
ENST00000521688.6
ENST00000523335.1
CDS-3UTR GCA 90 bp ATTATCTACAAGTCCCAGACAGCAAAAGGTACTCCACAAGAAACAGAAGGAACTTTTCCAGGAGAGGCCTaGAAAATTTCAAGAACTACT +
Preference number: 4 (lower is better)
Translates to: IIYKSQTAKGTPQETEGTFPGEA*KISRTT
Trigger: AGTAGTTCTTGAAATTTTGCAGGCCTCTCCTGGAAA...AGTTCCTTCTGTTTCTTGTGGAGTACCTTTTGCTGTCTGGGACTTGTAGATAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000517311.5
ENST00000521688.6
CDS-3UTR CCA 90 bp GGATGGTCAACATTCGCATTTTCCAGCAGAAGTCACGTAAGAATAGACAAGAGTGGTAAAGCTAATGGGTaGAGATTAATTCCCATTAAG +
Preference number: 4 (lower is better)
Translates to: GWSTFAFSSRSHVRIDKSGKANG*RLIPIK
Trigger: CTTAATGGGAATTAATCTCCACCCATTAGCTTTACC...ACTCTTGTCTATTCTTACGTGACTTCTGCTGGAAAATGCGAATGTTGACCATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000517311.5
ENST00000521688.6
ENST00000523335.1
CDS-3UTR TCA 90 bp GACTCAAAAGAGGAATACACCATATGCAGTCAGAAAAGGTTGCTTACTTCTCAGGATATTCTAAAAAGTTaGTCCATAGCAGTTGGGTGT +
Preference number: 4 (lower is better)
Translates to: DSKEEYTICSQKRLLTSQDILKS*SIAVGC
Trigger: ACACCCAACTGCTATGGATCAACTTTTTAGAATATC...CTGAGAAGTAAGCAACCTTTTCTGACTGCATATGGTGTATTCCTCTTTTGAGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000517311.5
ENST00000521688.6
ENST00000523335.1
CDS-3UTR TCA 90 bp GGACTCAAAAGAGGAATACACCATATGCAGTCAGAAAAGGTTGCTTACTTCTCAGATATTCTAAAAAGTTaGTCCATAGCAGTTGGGTGT +
Preference number: 4 (lower is better)
Translates to: GLKRGIHHMQSEKVAYFSDILKS*SIAVGC
Trigger: ACACCCAACTGCTATGGATCAACTTTTTAGAATATC...TGAGAAGTAAGCAACCTTTTCTGACTGCATATGGTGTATTCCTCTTTTGAGTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000517311.5
ENST00000521688.6
ENST00000523335.1
CDS-3UTR GCA 90 bp CAGTCAGAAAAGGTTGCTTACTTCTCAGCTGTTAACACAGAGAACTGTACATACAGAATCTTAAAGCCATaGCCCTTATCTTCAGAATCA +
Preference number: 4 (lower is better)
Translates to: QSEKVAYFSAVNTENCTYRILKP*PLSSES
Trigger: TGATTCTGAAGATAAGGGGCATGGCTTTAAGATTCT...GTATGTACAGTTCTCTGTGTTAACAGCTGAGAAGTAAGCAACCTTTTCTGACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517311.5
ENST00000521688.6
CDS-3UTR CCA 90 bp AGTCTGGTTTGGAGACAGTTTAGCATTTATCAACCTGTATTTGAAGTCACGGTCGGTAAAGCTAATGGGTaGAGATTAATTCCCATTAAG +
Preference number: 4 (lower is better)
Translates to: SLVWRQFSIYQPVFEVTVGKANG*RLIPIK
Trigger: CTTAATGGGAATTAATCTCCACCCATTAGCTTTACC...GACCGTGACTTCAAATACAGGTTGATAAATGCTAAACTGTCTCCAAACCAGACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000517311.5
ENST00000521688.6
ENST00000523335.1
3UTR CAA 72 bp TCAAAAGAGGAATACACCATATGCAGTCAGAAAAGGTaGCTTACTTCTCAGCTGTTAACACAGAGAACTGTA +
Preference number: 4 (lower is better)
Translates to: SKEEYTICSQKR*LTSQLLTQRTV
Trigger: TACAGTTCTCTGTGTTAACAGCTGAGAAGTAAGCAACCTTTTCTGACTGCATATGGTGTATTCCTCTTTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000517311.5
ENST00000520147.5
ENST00000521688.6
ENST00000523335.1
CDS-3UTR GCA 90 bp AGTCTGGTTTGGAGACAGTTTAGCATTTATCAACCTGTATTTGAAGTCACGGTCCTTAGTATGTGGGGTTaGAATTTAAAGATTCTGCAT +
Preference number: 4 (lower is better)
Translates to: SLVWRQFSIYQPVFEVTVLSMWG*NLKILH
Trigger: ATGCAGAATCTTTAAATTGCAACCCCACATACTAAG...GACCGTGACTTCAAATACAGGTTGATAAATGCTAAACTGTCTCCAAACCAGACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000517311.5
ENST00000521688.6
ENST00000523335.1
CDS-3UTR GCA 90 bp GTCAGATCAAGAAGGGCCTATGTGTTAATGCTGAATGAGTTTCATTCTACATTGAGAATCTTAAAGCCATaGCCCTTATCTTCAGAATCA +
Preference number: 4 (lower is better)
Translates to: VRSRRAYVLMLNEFHSTLRILKP*PLSSES
Trigger: TGATTCTGAAGATAAGGGGCATGGCTTTAAGATTCT...CAATGTAGAATGAAACTCATTCAGCATTAACACATAGGCCCTTCTTGATCTGAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517311.5
ENST00000521688.6
CDS-3UTR GCA 90 bp GTCAGATCAAGAAGGGCCTATGTGTTAATGCTGAATGAGTTTCATTCTACATTGGGAATTATGCATAGCTaGTTCTCACAGAAAAACAGT +
Preference number: 4 (lower is better)
Translates to: VRSRRAYVLMLNEFHSTLGIMHS*FSQKNS
Trigger: ACTGTTTTTCTGTGAGAAGCAGCTATGCATAATTCC...CAATGTAGAATGAAACTCATTCAGCATTAACACATAGGCCCTTCTTGATCTGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000517311.5
ENST00000521688.6
CDS-3UTR CCA 90 bp CAGTCAGAAAAGGTTGCTTACTTCTCAGCTGTTAACACAGAGAACTGTACATACATAATTAAGCCCAGCTaGTTCAAAGACTACACTTTA +
Preference number: 4 (lower is better)
Translates to: QSEKVAYFSAVNTENCTYIIKPS*FKDYTL
Trigger: TAAAGTGTAGTCTTTGAACCAGCTGGGCTTAATTAT...GTATGTACAGTTCTCTGTGTTAACAGCTGAGAAGTAAGCAACCTTTTCTGACTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517311.5
ENST00000521688.6
CDS-3UTR CCA 90 bp GGACTCAAAAGAGGAATACACCATATGCAGTCAGAAAAGGTTGCTTACTTCTCAATAATTAAGCCCAGCTaGTTCAAAGACTACACTTTA +
Preference number: 4 (lower is better)
Translates to: GLKRGIHHMQSEKVAYFSIIKPS*FKDYTL
Trigger: TAAAGTGTAGTCTTTGAACCAGCTGGGCTTAATTAT...TGAGAAGTAAGCAACCTTTTCTGACTGCATATGGTGTATTCCTCTTTTGAGTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517311.5
ENST00000521688.6
CDS-3UTR GCA 90 bp ATGATTGTTTTCATTGTGATAATAGGTAGCAGAATGATGAGCATCCCTATCACTGAGGAATACACCATATaGAGTCAGAAAAGGTTGCTT +
Preference number: 4 (lower is better)
Translates to: MIVFIVIIGSRMMSIPITEEYTI*SQKRLL
Trigger: AAGCAACCTTTTCTGACTGCATATGGTGTATTCCTC...AGTGATAGGGATGCTCATCATTCTGCTACCTATTATCACAATGAAAACAATCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517311.5
ENST00000521688.6
CDS-3UTR GCA 90 bp CAGTACTATGAAATAAGAACTATCCGCTATTTCTCACCTTTCCTGTGTACTATTGTTGAAGAGGAATTATaGATAGCTGCTTCTCACAGA +
Preference number: 4 (lower is better)
Translates to: QYYEIRTIRYFSPFLCTIVEEEL*IAASHR
Trigger: TCTGTGAGAAGCAGCTATGCATAATTCCTCTTCAAC...AATAGTACACAGGAAAGGTGAGAAATAGCGGATAGTTCTTATTTCATAGTACTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517311.5
ENST00000521688.6
CDS-3UTR GCA 90 bp CCTTTTCTCAACTATACCCAATTTATACCTTTTCTCATACTCCCATACTGTTCATTTCCAGGAGAGGCCTaGAAAATTTCAAGAACTACT +
Preference number: 4 (lower is better)
Translates to: PFLNYTQFIPFLILPYCSFPGEA*KISRTT
Trigger: AGTAGTTCTTGAAATTTTGCAGGCCTCTCCTGGAAA...TGAACAGTATGGGAGTATGAGAAAAGGTATAAATTGGGTATAGTTGAGAAAAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000517311.5
ENST00000521688.6
CDS GCA 90 bp TCACCGCGGGCGAGGGCCGTCCCTTCCCAGCGACGAAATGACCCTTaGGCTGAGGACCGTTACCTACCACACTCTTCGGCTGCCCGGACT +
Preference number: 5 (lower is better)
Translates to: SPRARAVPSQRRNDP*AEDRYLPHSSAART
Trigger: AGTCCGGGCAGCCGAAGAGTGTGGTAGGTAACGGTCCTCAGCGCAAGGGTCATTTCGTCGCTGGGAAGGGACGGCCCTCGCCCGCGGTGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000517311.5
ENST00000517756.5
ENST00000518584.5
ENST00000521688.6
ENST00000522407.5
ENST00000522632.1
ENST00000523335.1
CDS CCA 90 bp GTCGGGGACGCTAACGAAAGACAGTACATCGAAAGGAGCCTGGGCTaGGCCCGGGTCCCGGCCCTGAGGACCACGGGCATAGCTCACCAC +
Preference number: 5 (lower is better)
Translates to: VGDANERQYIERSLG*ARVPALRTTGIAHH
Trigger: GTGGTGAGCTATGCCCGTGGTCCTCAGGGCCGGGACCCGGGCCCAGCCCAGGCTCCTTTCGATGTACTGTCTTTCGTTAGCGTCCCCGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517350.5
CDS-3UTR CAA 90 bp AGTGGGAAGAGAGTTCCAAGTGGCAGGATGGTCAACATTCGCATTTTCCAGCAGGCATCTTTGTTCATCTaGCTAACCACCATCACCGCG +
Preference number: 5 (lower is better)
Translates to: SGKRVPSGRMVNIRIFQQASLFI*LTTITA
Trigger: CGCGGTGATGGTGGTTAGCAAGATGAACAAAGATGC...CTGCTGGAAAATGCGAATGTTGACCATCCTGCCACTTGGAACTCTCTTCCCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000517311.5
ENST00000521688.6
ENST00000523335.1
CDS-3UTR CAA 90 bp CAGTCAGAAAAGGTTGCTTACTTCTCAGCTGTTAACACAGAGAACTGTACATACCAGCAGTCTGGAAGGTaGAGGCAGGAGGATTGCCTG +
Preference number: 5 (lower is better)
Translates to: QSEKVAYFSAVNTENCTYQQSGR*RQEDCL
Trigger: CAGGCAATCCTCCTGCCTCAACCTTCCAGACTGCTG...GTATGTACAGTTCTCTGTGTTAACAGCTGAGAAGTAAGCAACCTTTTCTGACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520147.5
CDS-3UTR CAA 90 bp GAGTATGTGGAAGGAGCTTGGTATGGAGCCAACTTGCAAATGTTCTCTTCCATTGTATGTGGAAGGAGCTaGGTATGGAGCCAACTTGCA +
Preference number: 5 (lower is better)
Translates to: EYVEGAWYGANLQMFSSIVCGRS*VWSQLA
Trigger: TGCAAGTTGGCTCCATACCAAGCTCCTTCCACATAC...AATGGAAGAGAACATTTGCAAGTTGGCTCCATACCAAGCTCCTTCCACATACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000517311.5
ENST00000521688.6
ENST00000523335.1
CDS-3UTR CAA 90 bp CAAGTGGCAGGATGGTCAACATTCGCATTTTCCAGCAGAAGTCACGTAAGAATAGTATGTGGAAGGAGCTaGGTATGGAGCCAACTTGCA +
Preference number: 5 (lower is better)
Translates to: QVAGWSTFAFSSRSHVRIVCGRS*VWSQLA
Trigger: TGCAAGTTGGCTCCATACCAAGCTCCTTCCACATAC...TATTCTTACGTGACTTCTGCTGGAAAATGCGAATGTTGACCATCCTGCCACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000517311.5
ENST00000521688.6
ENST00000523335.1
CDS-3UTR CAA 90 bp TCAGAAGTGGTTCTCAATCAGCAGCATGAGCACCAGTTGGGTACTCGCCAGAAAGAGTTTCATTCTACATaGAGAAATTCCAAGCAGGGG +
Preference number: 5 (lower is better)
Translates to: SEVVLNQQHEHQLGTRQKEFHST*RNSKQG
Trigger: CCCCTGCTTGGAATTTCTCAATGTAGAATGAAACTC...TTTCTGGCGAGTACCCAACTGGTGCTCATGCTGCTGATTGAGAACCACTTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517311.5
ENST00000521688.6
CDS-3UTR CAA 90 bp GAGGAGTGGGAAGAGAGTTCCAAGTGGCAGGATGGTCAACATTCGCATTTTCCAGAGTTTCATTCTACATaGAGAAATTCCAAGCAGGGG +
Preference number: 5 (lower is better)
Translates to: EEWEESSKWQDGQHSHFPEFHST*RNSKQG
Trigger: CCCCTGCTTGGAATTTCTCAATGTAGAATGAAACTC...TGGAAAATGCGAATGTTGACCATCCTGCCACTTGGAACTCTCTTCCCACTCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517311.5
ENST00000521688.6
CDS-3UTR CAA 90 bp TATATTCAGAAGTGGTTCTCAATCAGCAGCATGAGCACCAGTTGGGTACTCGCCTGCAGTCAGAAAAGGTaGCTTACTTCTCAGCTGTTA +
Preference number: 5 (lower is better)
Translates to: YIQKWFSISSMSTSWVLACSQKR*LTSQLL
Trigger: TAACAGCTGAGAAGTAAGCAACCTTTTCTGACTGCA...GGCGAGTACCCAACTGGTGCTCATGCTGCTGATTGAGAACCACTTCTGAATATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517311.5
ENST00000521688.6
CDS-3UTR CAA 90 bp GAGTATGTGGAAGGAGCTTGGTATGGAGCCAACTTGCAAATGTTCTCTTCCATTAAGAGTCCATTGGATTaGGCAATCCTGATGTCAGGG +
Preference number: 5 (lower is better)
Translates to: EYVEGAWYGANLQMFSSIKSPLD*AILMSG
Trigger: CCCTGACATCAGGATTGCCAAATCCAATGGACTCTT...AATGGAAGAGAACATTTGCAAGTTGGCTCCATACCAAGCTCCTTCCACATACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000517311.5
ENST00000521688.6
ENST00000523335.1
CDS-3UTR CAA 90 bp GTTCCAAGTGGCAGGATGGTCAACATTCGCATTTTCCAGCAGAAGTCACGTAAGTTTATCAACCTGTATTaGAAGTCACGGTCTGACGCA +
Preference number: 5 (lower is better)
Translates to: VPSGRMVNIRIFQQKSRKFINLY*KSRSDA
Trigger: TGCGTCAGACCGTGACTTCAAATACAGGTTGATAAA...CTTACGTGACTTCTGCTGGAAAATGCGAATGTTGACCATCCTGCCACTTGGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000517311.5
ENST00000521688.6
ENST00000523335.1
CDS-3UTR CAA 90 bp AGTATGTGGAAGGAGCTTGGTATGGAGCCAACTTGCAAATGTTCTCTTCCATTAGCATCTTTGTTCATCTaGCTAACCACCATCACCGCG +
Preference number: 5 (lower is better)
Translates to: SMWKELGMEPTCKCSLPLASLFI*LTTITA
Trigger: CGCGGTGATGGTGGTTAGCAAGATGAACAAAGATGC...TAATGGAAGAGAACATTTGCAAGTTGGCTCCATACCAAGCTCCTTCCACATACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000517311.5
ENST00000521688.6
ENST00000523335.1
CDS GCA 90 bp GAACTCAAGTACTTTGACCCTAGGAGCTCCAAAACTGAACATAACTaGCGATCACTTCTGCAGAGACTGCATCCAAAAATTGGGAGAAGT +
Preference number: 5 (lower is better)
Translates to: ELKYFDPRSSKTEHN*RSLLQRLHPKIGRS
Trigger: ACTTCTCCCAATTTTTGGATGCAGTCTCTGCAGAAGTGATCGGCAGTTATGTTCAGTTTTGGAGCTCCTAGGGTCAAAGTACTTGAGTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517350.5
CDS-3UTR CAA 90 bp ACTCAAAAGAGGAATACACCATATGCAGTCAGAAAAGGTTGCTTACTTCTCAGCGTATGTGGAAGGAGCTaGGTATGGAGCCAACTTGCA +
Preference number: 5 (lower is better)
Translates to: TQKRNTPYAVRKGCLLLSVCGRS*VWSQLA
Trigger: TGCAAGTTGGCTCCATACCAAGCTCCTTCCACATAC...GCTGAGAAGTAAGCAACCTTTTCTGACTGCATATGGTGTATTCCTCTTTTGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000517311.5
ENST00000521688.6
ENST00000523335.1
CDS-3UTR CAA 90 bp TCCTCCTTTCCAGGAGAGGCCTGCAAAATTTCAAGAACTACTGTGTTGAAGAGGCAAGTTTCCTGGGATTaGCTCAGGAAAAGTATATCC +
Preference number: 5 (lower is better)
Translates to: SSFPGEACKISRTTVLKRQVSWD*LRKSIS
Trigger: GGATATACTTTTCCTGAGCAAATCCCAGGAAACTTG...CCTCTTCAACACAGTAGTTCTTGAAATTTTGCAGGCCTCTCCTGGAAAGGAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517311.5
ENST00000521688.6
CDS-3UTR CAA 90 bp CACCAGTTGGGTACTCGCCAGAAATACAGAATCTTAAAGCCATGCCCCTTATCTCAAGTTTCCTGGGATTaGCTCAGGAAAAGTATATCC +
Preference number: 5 (lower is better)
Translates to: HQLGTRQKYRILKPCPLSQVSWD*LRKSIS
Trigger: GGATATACTTTTCCTGAGCAAATCCCAGGAAACTTG...AGATAAGGGGCATGGCTTTAAGATTCTGTATTTCTGGCGAGTACCCAACTGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517311.5
ENST00000521688.6
CDS-3UTR CAA 90 bp ACCATATGCAGTCAGAAAAGGTTGCTTACTTCTCAGCTGTTAACACAGAGAACTGCATCTTTGTTCATCTaGCTAACCACCATCACCGCG +
Preference number: 5 (lower is better)
Translates to: TICSQKRLLTSQLLTQRTASLFI*LTTITA
Trigger: CGCGGTGATGGTGGTTAGCAAGATGAACAAAGATGC...AGTTCTCTGTGTTAACAGCTGAGAAGTAAGCAACCTTTTCTGACTGCATATGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000517311.5
ENST00000521688.6
ENST00000523335.1
CDS-3UTR CAA 90 bp AAGTTTCCTGGGATTTGCTCAGGAAAAGTATATCCAGTTAGTGAGGCAGAGGGCCCATTAAGTTCTTTCTaGACCTTAGTATGTGGGGTT +
Preference number: 5 (lower is better)
Translates to: KFPGICSGKVYPVSEAEGPLSSF*TLVCGV
Trigger: AACCCCACATACTAAGGTCAAGAAAGAACTTAATGG...GCCCTCTGCCTCACTAACTGGATATACTTTTCCTGAGCAAATCCCAGGAAACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000517311.5
ENST00000521688.6
ENST00000523335.1
CDS-3UTR CAA 90 bp GACGCAAGTTTCCTGGGATTTGCTCAGGAAAAGTATATCCAGTTAGTGAGGCAGCCATTAAGTTCTTTCTaGACCTTAGTATGTGGGGTT +
Preference number: 5 (lower is better)
Translates to: DASFLGFAQEKYIQLVRQPLSSF*TLVCGV
Trigger: AACCCCACATACTAAGGTCAAGAAAGAACTTAATGG...CTGCCTCACTAACTGGATATACTTTTCCTGAGCAAATCCCAGGAAACTTGCGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000517311.5
ENST00000521688.6
ENST00000523335.1
CDS-3UTR CAA 90 bp GAGCTTGGTATGGAGCCAACTTGCAAATGTTCTCTTCCATTAGATGGTAAATTCAAGAGTCCATTGGATTaGGCAATCCTGATGTCAGGG +
Preference number: 5 (lower is better)
Translates to: ELGMEPTCKCSLPLDGKFKSPLD*AILMSG
Trigger: CCCTGACATCAGGATTGCCAAATCCAATGGACTCTT...GAATTTACCATCTAATGGAAGAGAACATTTGCAAGTTGGCTCCATACCAAGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000517311.5
ENST00000521688.6
ENST00000523335.1
CDS-3UTR CAA 90 bp TCTACAAGTCCCAGACAGCAAAAGGTACTCCACAAGAAACAGAAGGAACTTCCACAAGTTTCCTGGGATTaGCTCAGGAAAAGTATATCC +
Preference number: 5 (lower is better)
Translates to: STSPRQQKVLHKKQKELPQVSWD*LRKSIS
Trigger: GGATATACTTTTCCTGAGCAAATCCCAGGAAACTTG...TGGAAGTTCCTTCTGTTTCTTGTGGAGTACCTTTTGCTGTCTGGGACTTGTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000517311.5
ENST00000521688.6
ENST00000523335.1
CDS GCA 90 bp TTGACCCTAGGAGCTCCAAAACTGAACATAACTGCCGATCACTTCTaGAGAGACTGCATCCAAAAATTGGGAGAAGTCATACATACTAAA +
Preference number: 5 (lower is better)
Translates to: LTLGAPKLNITADHF*RDCIQKLGEVIHTK
Trigger: TTTAGTATGTATGACTTCTCCCAATTTTTGGATGCAGTCTCTGCAGAAGTGATCGGCAGTTATGTTCAGTTTTGGAGCTCCTAGGGTCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517350.5
CDS CCA 90 bp TTCATCCTGTTTGTTCTTCTTCTGAGAATGGCAATTCCATTCTTCTaGTTCCTCAGACTAGGAATCTCTGTAGTATCCTTCCACTCAGCT +
Preference number: 5 (lower is better)
Translates to: FILFVLLLRMAIPFF*FLRLGISVVSFHSA
Trigger: AGCTGAGTGGAAGGATACTACAGAGATTCCTAGTCTGAGGAACCAGAAGAATGGAATTGCCATTCTCAGAAGAAGAACAAACAGGATGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521619.1
CDS-3UTR CAA 90 bp GGATGGTCAACATTCGCATTTTCCAGCAGAAGTCACGTAAGAATAGACAAGAGTTGCAGTCAGAAAAGGTaGCTTACTTCTCAGCTGTTA +
Preference number: 5 (lower is better)
Translates to: GWSTFAFSSRSHVRIDKSCSQKR*LTSQLL
Trigger: TAACAGCTGAGAAGTAAGCAACCTTTTCTGACTGCA...ACTCTTGTCTATTCTTACGTGACTTCTGCTGGAAAATGCGAATGTTGACCATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000517311.5
ENST00000521688.6
ENST00000523335.1
CDS-3UTR CAA 90 bp CAGTCAGAAAAGGTTGCTTACTTCTCAGCTGTTAACACAGAGAACTGTACATACTGCAGTCAGAAAAGGTaGCTTACTTCTCAGCTGTTA +
Preference number: 5 (lower is better)
Translates to: QSEKVAYFSAVNTENCTYCSQKR*LTSQLL
Trigger: TAACAGCTGAGAAGTAAGCAACCTTTTCTGACTGCA...GTATGTACAGTTCTCTGTGTTAACAGCTGAGAAGTAAGCAACCTTTTCTGACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000517311.5
ENST00000520147.5
ENST00000521688.6
ENST00000523335.1
CDS-3UTR CAA 90 bp GACTCAAAAGAGGAATACACCATATGCAGTCAGAAAAGGTTGCTTACTTCTCAGTGCAGTCAGAAAAGGTaGCTTACTTCTCAGCTGTTA +
Preference number: 5 (lower is better)
Translates to: DSKEEYTICSQKRLLTSQCSQKR*LTSQLL
Trigger: TAACAGCTGAGAAGTAAGCAACCTTTTCTGACTGCA...CTGAGAAGTAAGCAACCTTTTCTGACTGCATATGGTGTATTCCTCTTTTGAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000517311.5
ENST00000520147.5
ENST00000521688.6
ENST00000523335.1
CDS-3UTR CAA 90 bp ACTCAAAAGAGGAATACACCATATGCAGTCAGAAAAGGTTGCTTACTTCTCAGCTTTATCAACCTGTATTaGAAGTCACGGTCTGACGCA +
Preference number: 5 (lower is better)
Translates to: TQKRNTPYAVRKGCLLLSFINLY*KSRSDA
Trigger: TGCGTCAGACCGTGACTTCAAATACAGGTTGATAAA...GCTGAGAAGTAAGCAACCTTTTCTGACTGCATATGGTGTATTCCTCTTTTGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000517311.5
ENST00000521688.6
ENST00000523335.1
CDS-3UTR CAA 90 bp AGTCTGGTTTGGAGACAGTTTAGCATTTATCAACCTGTATTTGAAGTCACGGTCTTTATCAACCTGTATTaGAAGTCACGGTCTGACGCA +
Preference number: 5 (lower is better)
Translates to: SLVWRQFSIYQPVFEVTVFINLY*KSRSDA
Trigger: TGCGTCAGACCGTGACTTCAAATACAGGTTGATAAA...GACCGTGACTTCAAATACAGGTTGATAAATGCTAAACTGTCTCCAAACCAGACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000517311.5
ENST00000521688.6
ENST00000523335.1
CDS-3UTR CAA 90 bp GGACTCAAAAGAGGAATACACCATATGCAGTCAGAAAAGGTTGCTTACTTCTCAGCATCTTTGTTCATCTaGCTAACCTACCACACTCTT +
Preference number: 5 (lower is better)
Translates to: GLKRGIHHMQSEKVAYFSASLFI*LTYHTL
Trigger: AAGAGTGTGGTAGGTTAGCAAGATGAACAAAGATGC...TGAGAAGTAAGCAACCTTTTCTGACTGCATATGGTGTATTCCTCTTTTGAGTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520147.5
CDS GCA 90 bp GGAGCTCCAAAACTGAACATAACTGCCGATCACTTCTGCAGAGACTaGATCCAAAAATTGGGAGAAGTCATACATACTAAACATCAAAAA +
Preference number: 5 (lower is better)
Translates to: GAPKLNITADHFCRD*IQKLGEVIHTKHQK
Trigger: TTTTTGATGTTTAGTATGTATGACTTCTCCCAATTTTTGGATGCAGTCTCTGCAGAAGTGATCGGCAGTTATGTTCAGTTTTGGAGCTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517350.5
CDS GCA 90 bp CTTCTCAGGTTAAAAATGTCACATCCCAAACAAATTCTCTTTCCCTaGAAACCACTTTCACTATCCCTAGACATCCACTATGTGACATTC +
Preference number: 5 (lower is better)
Translates to: LLRLKMSHPKQILFP*KPLSLSLDIHYVTF
Trigger: GAATGTCACATAGTGGATGTCTAGGGATAGTGAAAGTGGTTTGCAGGGAAAGAGAATTTGTTTGGGATGTGACATTTTTAACCTGAGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521619.1
CDS-3UTR CAA 90 bp ACCATATGCAGTCAGAAAAGGTTGCTTACTTCTCAGCTGTTAACACAGAGAACTCCATTAAGTTCTTTCTaGACCTTAGTATGTGGGGTT +
Preference number: 5 (lower is better)
Translates to: TICSQKRLLTSQLLTQRTPLSSF*TLVCGV
Trigger: AACCCCACATACTAAGGTCAAGAAAGAACTTAATGG...AGTTCTCTGTGTTAACAGCTGAGAAGTAAGCAACCTTTTCTGACTGCATATGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000517311.5
ENST00000521688.6
ENST00000523335.1
CDS TCA 90 bp AACAGGAATATCATGGGTCTTGTACAACATCTAGAAAGTATTAACTaGACCTGGAGCAGCTGCACCTCGAAATCTTCAAATTCCAAAATC +
Preference number: 5 (lower is better)
Translates to: NRNIMGLVQHLESIN*TWSSCTSKSSNSKI
Trigger: GATTTTGGAATTTGAAGATTTCGAGGTGCAGCTGCTCCAGGTTCAGTTAATACTTTCTAGATGTTGTACAAGACCCATGATATTCCTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521619.1
CDS-3UTR CAA 90 bp CAGTACTATGAAATAAGAACTATCCGCTATTTCTCACCTTTCCTGTGTACTATTTGGTATGGAGCCAACTaGCAAATGTTCTCTTCCATT +
Preference number: 5 (lower is better)
Translates to: QYYEIRTIRYFSPFLCTIWYGAN*QMFSSI
Trigger: AATGGAAGAGAACATTTGCAAGTTGGCTCCATACCA...AATAGTACACAGGAAAGGTGAGAAATAGCGGATAGTTCTTATTTCATAGTACTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517311.5
ENST00000521688.6
CDS GCA 72 bp GCGAGGGCCGTCCCTTCCCAGCGACGAAATGACCCTTaGGCTGAGGACCGTTACCTACCACACTCTTCGGCT +
Preference number: 6 (lower is better)
Translates to: ARAVPSQRRNDP*AEDRYLPHSSA
Trigger: AGCCGAAGAGTGTGGTAGGTAACGGTCCTCAGCGCAAGGGTCATTTCGTCGCTGGGAAGGGACGGCCCTCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000517311.5
ENST00000517350.5
ENST00000517756.5
ENST00000518584.5
ENST00000521688.6
ENST00000522407.5
ENST00000522632.1
ENST00000523335.1
CDS GCA 72 bp GGAGCTCCAAAACTGAACATAACTGCCGATCACTTCTaGAGAGACTGCATCCAAAAATTGGGAGAAGTCATA +
Preference number: 6 (lower is better)
Translates to: GAPKLNITADHF*RDCIQKLGEVI
Trigger: TATGACTTCTCCCAATTTTTGGATGCAGTCTCTGCAGAAGTGATCGGCAGTTATGTTCAGTTTTGGAGCTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517350.5
CDS CAA 72 bp CAGTACCACTCCTGGAATATTGAACTTGATCTCGTCTaGGCTCCTAAAATACGGATAGTGACCTTGGACAAG +
Preference number: 6 (lower is better)
Translates to: QYHSWNIELDLV*APKIRIVTLDK
Trigger: CTTGTCCAAGGTCACTATCCGTATTTTAGGAGCCAAGACGAGATCAAGTTCAATATTCCAGGAGTGGTACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517350.5
CDS GCA 72 bp TACTTTGACCCTAGGAGCTCCAAAACTGAACATAACTaGCGATCACTTCTGCAGAGACTGCATCCAAAAATT +
Preference number: 6 (lower is better)
Translates to: YFDPRSSKTEHN*RSLLQRLHPKI
Trigger: AATTTTTGGATGCAGTCTCTGCAGAAGTGATCGGCAGTTATGTTCAGTTTTGGAGCTCCTAGGGTCAAAGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517350.5
CDS CAA 90 bp AGGTCTAGTCAGTACCACTCCTGGAATATTGAACTTGATCTCGTCTaGGCTCCTAAAATACGGATAGTGACCTTGGACAAGTCACTTAAT +
Preference number: 6 (lower is better)
Translates to: RSSQYHSWNIELDLV*APKIRIVTLDKSLN
Trigger: ATTAAGTGACTTGTCCAAGGTCACTATCCGTATTTTAGGAGCCAAGACGAGATCAAGTTCAATATTCCAGGAGTGGTACTGACTAGACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517350.5
CDS TCA 72 bp CTTGCATTGGTGCACTGTTCTAGAGTACAAGAACACTaGAACCTAGTATCTCATTTGTTACTCCCAGACTAT +
Preference number: 6 (lower is better)
Translates to: LALVHCSRVQEH*NLVSHLLLPDY
Trigger: ATAGTCTGGGAGTAACAAATGAGATACTAGGTTTCAGTGTTCTTGTACTCTAGAACAGTGCACCAATGCAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518584.5
CDS TCA 72 bp ATCATGGGTCTTGTACAACATCTAGAAAGTATTAACTaGACCTGGAGCAGCTGCACCTCGAAATCTTCAAAT +
Preference number: 6 (lower is better)
Translates to: IMGLVQHLESIN*TWSSCTSKSSN
Trigger: ATTTGAAGATTTCGAGGTGCAGCTGCTCCAGGTTCAGTTAATACTTTCTAGATGTTGTACAAGACCCATGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521619.1
CDS CCA 72 bp TTTGTTCTTCTTCTGAGAATGGCAATTCCATTCTTCTaGTTCCTCAGACTAGGAATCTCTGTAGTATCCTTC +
Preference number: 6 (lower is better)
Translates to: FVLLLRMAIPFF*FLRLGISVVSF
Trigger: GAAGGATACTACAGAGATTCCTAGTCTGAGGAACCAGAAGAATGGAATTGCCATTCTCAGAAGAAGAACAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521619.1
CDS GCA 72 bp AAACTGAACATAACTGCCGATCACTTCTGCAGAGACTaGATCCAAAAATTGGGAGAAGTCATACATACTAAA +
Preference number: 6 (lower is better)
Translates to: KLNITADHFCRD*IQKLGEVIHTK
Trigger: TTTAGTATGTATGACTTCTCCCAATTTTTGGATGCAGTCTCTGCAGAAGTGATCGGCAGTTATGTTCAGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517350.5
CDS CCA 72 bp TTCAAAATAACTACAAGGTCTAGTCAGTACCACTCCTaGAATATTGAACTTGATCTCGTCTTGGCTCCTAAA +
Preference number: 6 (lower is better)
Translates to: FKITTRSSQYHS*NIELDLVLAPK
Trigger: TTTAGGAGCCAAGACGAGATCAAGTTCAATATTCCAGGAGTGGTACTGACTAGACCTTGTAGTTATTTTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517350.5
CDS GCA 72 bp TTAAAAATGTCACATCCCAAACAAATTCTCTTTCCCTaGAAACCACTTTCACTATCCCTAGACATCCACTAT +
Preference number: 6 (lower is better)
Translates to: LKMSHPKQILFP*KPLSLSLDIHY
Trigger: ATAGTGGATGTCTAGGGATAGTGAAAGTGGTTTGCAGGGAAAGAGAATTTGTTTGGGATGTGACATTTTTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521619.1
CDS CAA 90 bp AAATTCCCTGCCTTCCAGTTACAAAACTTTAACTGTGGCCTAATCTaGGTTCAAATGCTAAATAGTTCTTTGATCTCATGCAAGTACTTA +
Preference number: 6 (lower is better)
Translates to: KFPAFQLQNFNCGLI*VQMLNSSLISCKYL
Trigger: TAAGTACTTGCATGAGATCAAAGAACTATTTAGCATTTGAACCAAGATTAGGCCACAGTTAAAGTTTTGTAACTGGAAGGCAGGGAATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521619.1
CDS CAA 72 bp TGTGGCCTAATCTTGGTTCAAATGCTAAATAGTTCTTaGATCTCATGCAAGTACTTAAATTCTAGGCCTTTC +
Preference number: 6 (lower is better)
Translates to: CGLILVQMLNSS*ISCKYLNSRPF
Trigger: GAAAGGCCTAGAATTTAAGTACTTGCATGAGATCAAAGAACTATTTAGCATTTGAACCAAGATTAGGCCACA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521619.1