Pregenerated sensors for ENTR1 (Homo sapiens)
Ensembl gene IDs: ENSG00000165689Ensembl transcript IDs: ENST00000298537.11, ENST00000357365.8, ENST00000371725.7, ENST00000446833.1, ENST00000461693.5, ENST00000468963.1, ENST00000486441.1
Found 12 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | TCGCCCGCCGCTCGGCCGCCCCCGCGCCTCCGAGCCTCTCGCCGCTaGTTCCGCTCCGAGCACCGAAAGCGCGTGCCTGAACGCCTTGGG | + |
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Preference number: 5 (lower is better) Translates to: SPAARPPPRLRASRR*FRSEHRKRVPERLG Trigger: CCCAAGGCGTTCAGGCACGCGCTTTCGGTGCTCGGAGCGGAAGCAGCGGCGAGAGGCTCGGAGGCGCGGGGGCGGCCGAGCGGCGGGCGA 77% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000298537.11 ENST00000357365.8 ENST00000371725.7 |
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| CDS CCA 90 bp | GACGAGCTCGTGCTGCAGCGGAGGTGCCACACGTGGCGCGGGAACTaGAAGCGTCCCCGGGGCCGGCGCCCTCGTCTCTCACCTGTGTCT | + |
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Preference number: 5 (lower is better) Translates to: DELVLQRRCHTWRGN*KRPRGRRPRLSPVS Trigger: AGACACAGGTGAGAGACGAGGGCGCCGGCCCCGGGGACGCTTCCAGTTCCCGCGCCACGTGTGGCACCTCCGCTGCAGCACGAGCTCGTC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000446833.1 |
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| CDS CCA 90 bp | GATGGGTCAATGGACGAGCTCGTGCTGCAGCGGAGGTGCCACACGTaGCGCGGGAACTGGAAGCGTCCCCGGGGCCGGCGCCCTCGTCTC | + |
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Preference number: 5 (lower is better) Translates to: DGSMDELVLQRRCHT*RGNWKRPRGRRPRL Trigger: GAGACGAGGGCGCCGGCCCCGGGGACGCTTCCAGTTCCCGCGCCACGTGTGGCACCTCCGCTGCAGCACGAGCTCGTCCATTGACCCATC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000446833.1 |
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| CDS GCA 90 bp | CTGCACATTGATGGGTCAATGGACGAGCTCGTGCTGCAGCGGAGGTaGCACACGTGGCGCGGGAACTGGAAGCGTCCCCGGGGCCGGCGC | + |
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Preference number: 5 (lower is better) Translates to: LHIDGSMDELVLQRR*HTWRGNWKRPRGRR Trigger: GCGCCGGCCCCGGGGACGCTTCCAGTTCCCGCGCCACGTGTGGCACCTCCGCTGCAGCACGAGCTCGTCCATTGACCCATCAATGTGCAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000446833.1 |
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| CDS CCA 90 bp | ATCGCCTTGTCCTGGAAATCAAACCAGGCCACCCAAGAGGTAGGATaGCTCCAGGTTCTCCCCGGGAGAAGCCGCTCGGACAGGCGCTGT | + |
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Preference number: 5 (lower is better) Translates to: IALSWKSNQATQEVG*LQVLPGRSRSDRRC Trigger: ACAGCGCCTGTCCGAGCGGCTTCTCCCGGGGAGAACCTGGAGCCATCCTACCTCTTGGGTGGCCTGGTTTGATTTCCAGGACAAGGCGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000468963.1 ENST00000486441.1 |
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| CDS TCA 90 bp | CTAGCAGGGGACTCCGCCTTTGAATTCCGAGTGCCTGGCACGCAGTaGGCGCTCTGCACATTGATGGGTCAATGGACGAGCTCGTGCTGC | + |
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Preference number: 5 (lower is better) Translates to: LAGDSAFEFRVPGTQ*ALCTLMGQWTSSCC Trigger: GCAGCACGAGCTCGTCCATTGACCCATCAATGTGCAGAGCGCTCACTGCGTGCCAGGCACTCGGAATTCAAAGGCGGAGTCCCCTGCTAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000446833.1 |
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| CDS CCA 72 bp | ATGGACGAGCTCGTGCTGCAGCGGAGGTGCCACACGTaGCGCGGGAACTGGAAGCGTCCCCGGGGCCGGCGC | + |
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Preference number: 6 (lower is better) Translates to: MDELVLQRRCHT*RGNWKRPRGRR Trigger: GCGCCGGCCCCGGGGACGCTTCCAGTTCCCGCGCCACGTGTGGCACCTCCGCTGCAGCACGAGCTCGTCCAT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000446833.1 |
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| CDS GCA 72 bp | GATGGGTCAATGGACGAGCTCGTGCTGCAGCGGAGGTaGCACACGTGGCGCGGGAACTGGAAGCGTCCCCGG | + |
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Preference number: 6 (lower is better) Translates to: DGSMDELVLQRR*HTWRGNWKRPR Trigger: CCGGGGACGCTTCCAGTTCCCGCGCCACGTGTGGCACCTCCGCTGCAGCACGAGCTCGTCCATTGACCCATC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000446833.1 |
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| CDS GCA 72 bp | CTCTGCACATTGATGGGTCAATGGACGAGCTCGTGCTaGAGCGGAGGTGCCACACGTGGCGCGGGAACTGGA | + |
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Preference number: 6 (lower is better) Translates to: LCTLMGQWTSSC*SGGATRGAGTG Trigger: TCCAGTTCCCGCGCCACGTGTGGCACCTCCGCTGCAGCACGAGCTCGTCCATTGACCCATCAATGTGCAGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000446833.1 |
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| CDS CCA 72 bp | TCCTGGAAATCAAACCAGGCCACCCAAGAGGTAGGATaGCTCCAGGTTCTCCCCGGGAGAAGCCGCTCGGAC | + |
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Preference number: 6 (lower is better) Translates to: SWKSNQATQEVG*LQVLPGRSRSD Trigger: GTCCGAGCGGCTTCTCCCGGGGAGAACCTGGAGCCATCCTACCTCTTGGGTGGCCTGGTTTGATTTCCAGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000468963.1 ENST00000486441.1 |
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| CDS CAA 90 bp | CCAGATCTTCAAATCTGTCATCATCCTGTACTGGAACTGTCTGTCTaGGGGGAGGTCTCCCCGCAACCAGACTGTGAGCTCCTAGCAGGG | + |
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Preference number: 6 (lower is better) Translates to: PDLQICHHPVLELSV*GEVSPQPDCELLAG Trigger: CCCTGCTAGGAGCTCACAGTCTGGTTGCGGGGAGACCTCCCCCAAGACAGACAGTTCCAGTACAGGATGATGACAGATTTGAAGATCTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000446833.1 |
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| CDS CAA 72 bp | TCAAGCGTCCTCACCCTTGTTAAAGAAAAACCCGAGTaGTTAATTTCTGTGGCTACTTTTAAGAGGACTACA | + |
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Preference number: 6 (lower is better) Translates to: SSVLTLVKEKPE*LISVATFKRTT Trigger: TGTAGTCCTCTTAAAAGTAGCCACAGAAATTAACAACTCGGGTTTTTCTTTAACAAGGGTGAGGACGCTTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000461693.5 |
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