RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ENTPD6 (Homo sapiens)

Ensembl gene IDs: ENSG00000197586

Ensembl transcript IDs: ENST00000354989.9, ENST00000360031.6, ENST00000376652.9, ENST00000376666.3, ENST00000417467.5, ENST00000418890.5, ENST00000425813.5, ENST00000427553.5, ENST00000433259.6, ENST00000433417.5, ENST00000435520.5, ENST00000439162.5, ENST00000447877.5, ENST00000463734.1, ENST00000471478.1, ENST00000481322.1, ENST00000485936.5, ENST00000490187.1

Found 775 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGTCAGCCCGAGGTGGGCGGATGGTGGCCCGAGACACCGAGAGCTTaGTTCTGGGACTGTGGCTCAGCTGACCCGTGGCACAGCTGCACC +
Preference number: 1 (lower is better)
Translates to: GQPEVGGWWPETPRA*FWDCGSADPWHSCT
Trigger: GGTGCAGCTGTGCCACGGGTCAGCTGAGCCACAGTCCCAGAACCAAGCTCTCGGTGTCTCGGGCCACCATCCGCCCACCTCGGGCTGACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
3UTR GCA 90 bp GTGTTATGGCTGTCCCTCGGCTTCCCCAGAGCAGCCAGGACAGCCTaGACCGCCTCCCAGACTCTTGCAGGAAGGGGAGCTCTGCCCTGG +
Preference number: 1 (lower is better)
Translates to: VLWLSLGFPRAARTA*TASQTLAGRGALPW
Trigger: CCAGGGCAGAGCTCCCCTTCCTGCAAGAGTCTGGGAGGCGGTGCAGGCTGTCCTGGCTGCTCTGGGGAAGCCGAGGGACAGCCATAACAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
3UTR GCA 90 bp CTGTGGCTCCTCAGGATGAAGTCACGTCCAGGACAGGAGGGTTTATaGAGACACACAGACACTGCTGACGGGGACAGGGATGGCTCGGCC +
Preference number: 1 (lower is better)
Translates to: LWLLRMKSRPGQEGL*RHTDTADGDRDGSA
Trigger: GGCCGAGCCATCCCTGTCCCCGTCAGCAGTGTCTGTGTGTCTGCATAAACCCTCCTGTCCTGGACGTGACTTCATCCTGAGGAGCCACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
3UTR GCA 90 bp ACCCAAGGAAGAGGCAAACACACTCAAGTCCAGAGTTCCCAGTGGTaGCGCCCAGACCTACTGTCCCGGGGGTGTTATGGCTGTCCCTCG +
Preference number: 1 (lower is better)
Translates to: TQGRGKHTQVQSSQW*RPDLLSRGCYGCPS
Trigger: CGAGGGACAGCCATAACACCCCCGGGACAGTAGGTCTGGGCGGCACCACTGGGAACTCTGGACTTGAGTGTGTTTGCCTCTTCCTTGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
3UTR CCA 90 bp AGCTCATGCCCGGCATCCGCCCATGCTGGGAGACTCCCTGAAAGGTaGGCACCTGCCGTCTATGAGGAGGTGTCTCCCTCCATCATTAAC +
Preference number: 1 (lower is better)
Translates to: SSCPASAHAGRLPER*APAVYEEVSPSIIN
Trigger: GTTAATGATGGAGGGAGACACCTCCTCATAGACGGCAGGTGCCCACCTTTCAGGGAGTCTCCCAGCATGGGCGGATGCCGGGCATGAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
3UTR TCA 90 bp GTCACGTCCAGGACAGGAGGGTTTATGCAGACACACAGACACTGCTaGCGGGGACAGGGATGGCTCGGCCACTATGAGGCTGGACTCTTC +
Preference number: 1 (lower is better)
Translates to: VTSRTGGFMQTHRHC*RGQGWLGHYEAGLF
Trigger: GAAGAGTCCAGCCTCATAGTGGCCGAGCCATCCCTGTCCCCGTCAGCAGTGTCTGTGTGTCTGCATAAACCCTCCTGTCCTGGACGTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376666.3
ENST00000433259.6
3UTR CCA 90 bp CATACCCAAGGAAGAGGCAAACACACTCAAGTCCAGAGTTCCCAGTaGTGCCGCCCAGACCTACTGTCCCGGGGGTGTTATGGCTGTCCC +
Preference number: 1 (lower is better)
Translates to: HTQGRGKHTQVQSSQ*CRPDLLSRGCYGCP
Trigger: GGGACAGCCATAACACCCCCGGGACAGTAGGTCTGGGCGGCACCACTGGGAACTCTGGACTTGAGTGTGTTTGCCTCTTCCTTGGGTATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
3UTR CCA 90 bp TTTTTGTCTTTTGTCCTTTCCTGCTCTGTGCAGGCCTCCACCACGTaGCTCCATCAGCATTCGCTGCAGCCCTGGGAGGCCCTAGGGCCA +
Preference number: 1 (lower is better)
Translates to: FLSFVLSCSVQASTT*LHQHSLQPWEALGP
Trigger: TGGCCCTAGGGCCTCCCAGGGCTGCAGCGAATGCTGATGGAGCCACGTGGTGGAGGCCTGCACAGAGCAGGAAAGGACAAAAGACAAAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376652.9
3UTR GCA 90 bp GACGTCACTCAAGCAGCACAGCCACAAATAGTTTACAGCAGCTCATaGCCGGCATCCGCCCATGCTGGGAGACTCCCTGAAAGGTGGGCA +
Preference number: 1 (lower is better)
Translates to: DVTQAAQPQIVYSSS*PASAHAGRLPERWA
Trigger: TGCCCACCTTTCAGGGAGTCTCCCAGCATGGGCGGATGCCGGGCATGAGCTGCTGTAAACTATTTGTGGCTGTGCTGCTTGAGTGACGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
3UTR GCA 90 bp GGCACAAGCACTCGGGATGTGGGCTGGTCTGCAGTTTCCCTGGCATaGGACACCTTTGGGACGCTTCCAGACCAAAACCAGATCCTTGCT +
Preference number: 1 (lower is better)
Translates to: GTSTRDVGWSAVSLA*DTFGTLPDQNQILA
Trigger: AGCAAGGATCTGGTTTTGGTCTGGAAGCGTCCCAAAGGTGTCGCATGCCAGGGAAACTGCAGACCAGCCCACATCCCGAGTGCTTGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376652.9
3UTR CCA 90 bp CTTCAGGCACAAGCACTCGGGATGTGGGCTGGTCTGCAGTTTCCCTaGCATGCGACACCTTTGGGACGCTTCCAGACCAAAACCAGATCC +
Preference number: 1 (lower is better)
Translates to: LQAQALGMWAGLQFP*HATPLGRFQTKTRS
Trigger: GGATCTGGTTTTGGTCTGGAAGCGTCCCAAAGGTGTCGCATGCCAGGGAAACTGCAGACCAGCCCACATCCCGAGTGCTTGTGCCTGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376652.9
3UTR TCA 90 bp TGTCCAGTAGGATTGAAGGCAACGTGGCAACGTCTGCTTATGCCCTaGAACTCACTGCCCTGGGATCCTGCCATCCAAACACGGGGACTG +
Preference number: 1 (lower is better)
Translates to: CPVGLKATWQRLLMP*NSLPWDPAIQTRGL
Trigger: CAGTCCCCGTGTTTGGATGGCAGGATCCCAGGGCAGTGAGTTTCAGGGCATAAGCAGACGTTGCCACGTTGCCTTCAATCCTACTGGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376652.9
3UTR TCA 90 bp GACACACAGACACTGCTGACGGGGACAGGGATGGCTCGGCCACTATaGGGCTGGACTCTTCTGTCTGTTCAGGGAGTCGATGTAATGAAA +
Preference number: 1 (lower is better)
Translates to: DTQTLLTGTGMARPL*GWTLLSVQGVDVMK
Trigger: TTTCATTACATCGACTCCCTGAACAGACAGAAGAGTCCAGCCTCATAGTGGCCGAGCCATCCCTGTCCCCGTCAGCAGTGTCTGTGTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376666.3
ENST00000433259.6
3UTR CCA 90 bp GGACGCTTCCAGACCAAAACCAGATCCTTGCTGAACAGAATGACATaGGGACTTGCAGCTCACTCGAGGTTATGTGCCCAGGCCTCACCT +
Preference number: 1 (lower is better)
Translates to: GRFQTKTRSLLNRMT*GLAAHSRLCAQASP
Trigger: AGGTGAGGCCTGGGCACATAACCTCGAGTGAGCTGCAAGTCCCCATGTCATTCTGTTCAGCAAGGATCTGGTTTTGGTCTGGAAGCGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376652.9
3UTR TCA 90 bp GAGAAGGAGAAGCCCCTGTCAACCTTTTATTGGGAGTGGAACACATaGGGTTCAGCTCGTGCCGGGCACTGTACATTCACTGAAGCAGCT +
Preference number: 1 (lower is better)
Translates to: EKEKPLSTFYWEWNT*GSARAGHCTFTEAA
Trigger: AGCTGCTTCAGTGAATGTACAGTGCCCGGCACGAGCTGAACCTCATGTGTTCCACTCCCAATAAAAGGTTGACAGGGGCTTCTCCTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
3UTR GCA 90 bp AGAGCCTACTTCATTATCACAAAAGACACTCAGAGAGAAATGACTTaGATACTTTGCCGGGCCCAGAAATATTCCATGACTTATTTGGTG +
Preference number: 1 (lower is better)
Translates to: RAYFIITKDTQREMT*ILCRAQKYSMTYLV
Trigger: CACCAAATAAGTCATGGAATATTTCTGGGCCCGGCAAAGTATGCAAGTCATTTCTCTCTGAGTGTCTTTTGTGATAATGAAGTAGGCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376652.9
3UTR GCA 90 bp TTCATTATCACAAAAGACACTCAGAGAGAAATGACTTGCATACTTTaGCGGGCCCAGAAATATTCCATGACTTATTTGGTGCACTTTTGG +
Preference number: 1 (lower is better)
Translates to: FIITKDTQREMTCIL*RAQKYSMTYLVHFW
Trigger: CCAAAAGTGCACCAAATAAGTCATGGAATATTTCTGGGCCCGGCAAAGTATGCAAGTCATTTCTCTCTGAGTGTCTTTTGTGATAATGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376652.9
3UTR-3UTR CCA 90 bp GGAGGTGGGGTCAGCCCGAGGTGGGCGGATGGTGGCCCGAGACACCGAGAGCTTGGGGTCAGCCCGAGGTaGGCGGATGGTGGCCCGAGA +
Preference number: 2 (lower is better)
Translates to: GGGVSPRWADGGPRHRELGVSPR*ADGGPR
Trigger: TCTCGGGCCACCATCCGCCCACCTCGGGCTGACCCC...AAGCTCTCGGTGTCTCGGGCCACCATCCGCCCACCTCGGGCTGACCCCACCTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
3UTR-3UTR GCA 90 bp GTGCCGCCCAGACCTACTGTCCCGGGGGTGTTATGGCTGTCCCTCGGCTTCCCCGGCAGGGAGCCACACTaGCCCCTCAGTGTGTGCCTG +
Preference number: 2 (lower is better)
Translates to: VPPRPTVPGVLWLSLGFPGREPH*PLSVCL
Trigger: CAGGCACACACTGAGGGGGCAGTGTGGCTCCCTGCC...GGGGAAGCCGAGGGACAGCCATAACACCCCCGGGACAGTAGGTCTGGGCGGCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
3UTR-3UTR TCA 90 bp CCCAGTGGTGCCGCCCAGACCTACTGTCCCGGGGGTGTTATGGCTGTCCCTCGGGTGACTGGAAGAGGCTaGTGCCAGGGCAGCACCAGG +
Preference number: 2 (lower is better)
Translates to: PSGAAQTYCPGGVMAVPRVTGRG*CQGSTR
Trigger: CCTGGTGCTGCCCTGGCATCAGCCTCTTCCAGTCAC...CCGAGGGACAGCCATAACACCCCCGGGACAGTAGGTCTGGGCGGCACCACTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
3UTR-3UTR TCA 90 bp CCGGGGGTGTTATGGCTGTCCCTCGGCTTCCCCAGAGCAGCCAGGACAGCCTGCGTGACTGGAAGAGGCTaGTGCCAGGGCAGCACCAGG +
Preference number: 2 (lower is better)
Translates to: PGVLWLSLGFPRAARTACVTGRG*CQGSTR
Trigger: CCTGGTGCTGCCCTGGCATCAGCCTCTTCCAGTCAC...GCAGGCTGTCCTGGCTGCTCTGGGGAAGCCGAGGGACAGCCATAACACCCCCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
3UTR-3UTR GCA 90 bp ACACTGAGCAGGATGCACGGCCCGGGGCTCACACTGTCCATGGAGGAGGTGGGGGGCAGGGAGCCACACTaGCCCCTCAGTGTGTGCCTG +
Preference number: 2 (lower is better)
Translates to: TLSRMHGPGLTLSMEEVGGREPH*PLSVCL
Trigger: CAGGCACACACTGAGGGGGCAGTGTGGCTCCCTGCC...CCCCACCTCCTCCATGGACAGTGTGAGCCCCGGGCCGTGCATCCTGCTCAGTGT
67% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
3UTR-3UTR GCA 90 bp AGCCCCGACACTGACGCCACACTGAGCAGGATGCACGGCCCGGGGCTCACACTGGCAGCCAGGACAGCCTaGACCGCCTCCCAGACTCTT +
Preference number: 2 (lower is better)
Translates to: SPDTDATLSRMHGPGLTLAARTA*TASQTL
Trigger: AAGAGTCTGGGAGGCGGTGCAGGCTGTCCTGGCTGC...CAGTGTGAGCCCCGGGCCGTGCATCCTGCTCAGTGTGGCGTCAGTGTCGGGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
3UTR-3UTR CCA 90 bp GCTCGTGCCGGGCACTGTACATTCACTGAAGCAGCTCAAGGGGCTCAGCCCCGACCCGCGGACGGGGCATaGGGATGGGACAGGCAGGGA +
Preference number: 2 (lower is better)
Translates to: ARAGHCTFTEAAQGAQPRPADGA*GWDRQG
Trigger: TCCCTGCCTGTCCCATCCCCATGCCCCGTCCGCGGG...TCGGGGCTGAGCCCCTTGAGCTGCTTCAGTGAATGTACAGTGCCCGGCACGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
3UTR-3UTR CCA 90 bp CTGTGCAGGCCTCCACCACGTGGCTCCATCAGCATTCGCTGCAGCCCTGGGAGGGAGGTGGGCGGATGGTaGCCCGAGACACCGAGAGCT +
Preference number: 2 (lower is better)
Translates to: LCRPPPRGSISIRCSPGREVGGW*PETPRA
Trigger: AGCTCTCGGTGTCTCGGGCCACCATCCGCCCACCTC...CCTCCCAGGGCTGCAGCGAATGCTGATGGAGCCACGTGGTGGAGGCCTGCACAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376652.9
3UTR-3UTR TCA 90 bp AGCCCCGACACTGACGCCACACTGAGCAGGATGCACGGCCCGGGGCTCACACTGACACACAGACACTGCTaGCGGGGACAGGGATGGCTC +
Preference number: 2 (lower is better)
Translates to: SPDTDATLSRMHGPGLTLTHRHC*RGQGWL
Trigger: GAGCCATCCCTGTCCCCGTCAGCAGTGTCTGTGTGT...CAGTGTGAGCCCCGGGCCGTGCATCCTGCTCAGTGTGGCGTCAGTGTCGGGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
3UTR-3UTR TCA 90 bp GTGCCGCCCAGACCTACTGTCCCGGGGGTGTTATGGCTGTCCCTCGGCTTCCCCCCCTCTGGCCAGATGTaGCTGGAAGAGGCTGATGCC +
Preference number: 2 (lower is better)
Translates to: VPPRPTVPGVLWLSLGFPPSGQM*LEEADA
Trigger: GGCATCAGCCTCTTCCAGTCACATCTGGCCAGAGGG...GGGGAAGCCGAGGGACAGCCATAACACCCCCGGGACAGTAGGTCTGGGCGGCAC
66% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
3UTR-3UTR TCA 90 bp AGCCCCGACACTGACGCCACACTGAGCAGGATGCACGGCCCGGGGCTCACACTGCCCTCTGGCCAGATGTaGCTGGAAGAGGCTGATGCC +
Preference number: 2 (lower is better)
Translates to: SPDTDATLSRMHGPGLTLPSGQM*LEEADA
Trigger: GGCATCAGCCTCTTCCAGTCACATCTGGCCAGAGGG...CAGTGTGAGCCCCGGGCCGTGCATCCTGCTCAGTGTGGCGTCAGTGTCGGGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
3UTR-3UTR TCA 90 bp ACACTGAGCAGGATGCACGGCCCGGGGCTCACACTGTCCATGGAGGAGGTGGGGTGCTGGGAGACTCCCTaGAAGGTGGGCACCTGCCGT +
Preference number: 2 (lower is better)
Translates to: TLSRMHGPGLTLSMEEVGCWETP*KVGTCR
Trigger: ACGGCAGGTGCCCACCTTTCAGGGAGTCTCCCAGCA...CCCCACCTCCTCCATGGACAGTGTGAGCCCCGGGCCGTGCATCCTGCTCAGTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
3UTR-3UTR GCA 90 bp CACTCAAGTCCAGAGTTCCCAGTGGTGCCGCCCAGACCTACTGTCCCGGGGGTGGGCAGGGAGCCACACTaGCCCCTCAGTGTGTGCCTG +
Preference number: 2 (lower is better)
Translates to: HSSPEFPVVPPRPTVPGVGREPH*PLSVCL
Trigger: CAGGCACACACTGAGGGGGCAGTGTGGCTCCCTGCC...CACCCCCGGGACAGTAGGTCTGGGCGGCACCACTGGGAACTCTGGACTTGAGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
3UTR-3UTR GCA 90 bp GGTACGCGGGCTGGGGTGGCATGTGGGGCGTGTGAGACCTGTCTGAGCTTGTCAGGCAGGGAGCCACACTaGCCCCTCAGTGTGTGCCTG +
Preference number: 2 (lower is better)
Translates to: GTRAGVACGACETCLSLSGREPH*PLSVCL
Trigger: CAGGCACACACTGAGGGGGCAGTGTGGCTCCCTGCC...TGACAAGCTCAGACAGGTCTCACACGCCCCACATGCCACCCCAGCCCGCGTACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000376652.9
3UTR-3UTR GCA 90 bp CCCAGTGGTGCCGCCCAGACCTACTGTCCCGGGGGTGTTATGGCTGTCCCTCGGCAGGAAGGGGAGCTCTaGCCTGGGGAGGAAACTGAC +
Preference number: 2 (lower is better)
Translates to: PSGAAQTYCPGGVMAVPRQEGEL*PGEETD
Trigger: GTCAGTTTCCTCCCCAGGGCAGAGCTCCCCTTCCTG...CCGAGGGACAGCCATAACACCCCCGGGACAGTAGGTCTGGGCGGCACCACTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
3UTR-3UTR GCA 90 bp ACACTGAGCAGGATGCACGGCCCGGGGCTCACACTGTCCATGGAGGAGGTGGGGGCAGCCAGGACAGCCTaGACCGCCTCCCAGACTCTT +
Preference number: 2 (lower is better)
Translates to: TLSRMHGPGLTLSMEEVGAARTA*TASQTL
Trigger: AAGAGTCTGGGAGGCGGTGCAGGCTGTCCTGGCTGC...CCCCACCTCCTCCATGGACAGTGTGAGCCCCGGGCCGTGCATCCTGCTCAGTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
3UTR-3UTR CCA 90 bp GACACTGACGCCACACTGAGCAGGATGCACGGCCCGGGGCTCACACTGTCCATGGAGGTGGGCGGATGGTaGCCCGAGACACCGAGAGCT +
Preference number: 2 (lower is better)
Translates to: DTDATLSRMHGPGLTLSMEVGGW*PETPRA
Trigger: AGCTCTCGGTGTCTCGGGCCACCATCCGCCCACCTC...CATGGACAGTGTGAGCCCCGGGCCGTGCATCCTGCTCAGTGTGGCGTCAGTGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
3UTR-3UTR TCA 90 bp ACACTGAGCAGGATGCACGGCCCGGGGCTCACACTGTCCATGGAGGAGGTGGGGCCCTGGGGAGGAAACTaGCAGGCTGGGAGACAAGAC +
Preference number: 2 (lower is better)
Translates to: TLSRMHGPGLTLSMEEVGPWGGN*QAGRQD
Trigger: GTCTTGTCTCCCAGCCTGTCAGTTTCCTCCCCAGGG...CCCCACCTCCTCCATGGACAGTGTGAGCCCCGGGCCGTGCATCCTGCTCAGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
3UTR-3UTR GCA 90 bp GTGCCGCCCAGACCTACTGTCCCGGGGGTGTTATGGCTGTCCCTCGGCTTCCCCTGCCCCCTCAGTGTGTaGCTGTGGTTCTGTCCTGGT +
Preference number: 2 (lower is better)
Translates to: VPPRPTVPGVLWLSLGFPCPLSV*LWFCPG
Trigger: ACCAGGACAGAACCACAGGCACACACTGAGGGGGCA...GGGGAAGCCGAGGGACAGCCATAACACCCCCGGGACAGTAGGTCTGGGCGGCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
3UTR-3UTR GCA 90 bp GCATCCGCCCATGCTGGGAGACTCCCTGAAAGGTGGGCACCTGCCGTCTATGAGGGCAGGGAGCCACACTaGCCCCTCAGTGTGTGCCTG +
Preference number: 2 (lower is better)
Translates to: ASAHAGRLPERWAPAVYEGREPH*PLSVCL
Trigger: CAGGCACACACTGAGGGGGCAGTGTGGCTCCCTGCC...CTCATAGACGGCAGGTGCCCACCTTTCAGGGAGTCTCCCAGCATGGGCGGATGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
3UTR-3UTR GCA 90 bp GGTACGCGGGCTGGGGTGGCATGTGGGGCGTGTGAGACCTGTCTGAGCTTGTCACGCCTCCCAGACTCTTaGAGGAAGGGGAGCTCTGCC +
Preference number: 2 (lower is better)
Translates to: GTRAGVACGACETCLSLSRLPDS*RKGSSA
Trigger: GGCAGAGCTCCCCTTCCTGCAAGAGTCTGGGAGGCG...TGACAAGCTCAGACAGGTCTCACACGCCCCACATGCCACCCCAGCCCGCGTACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000376652.9
3UTR-3UTR CCA 90 bp CCGGGGGTGTTATGGCTGTCCCTCGGCTTCCCCAGAGCAGCCAGGACAGCCTGCCTGGCCAGATGTGACTaGAAGAGGCTGATGCCAGGG +
Preference number: 2 (lower is better)
Translates to: PGVLWLSLGFPRAARTACLARCD*KRLMPG
Trigger: CCCTGGCATCAGCCTCTTCCAGTCACATCTGGCCAG...GCAGGCTGTCCTGGCTGCTCTGGGGAAGCCGAGGGACAGCCATAACACCCCCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
3UTR-3UTR CCA 90 bp ACACTGAGCAGGATGCACGGCCCGGGGCTCACACTGTCCATGGAGGAGGTGGGGGCTGCACCTAAGACATaGCCCTGGCTAGGCGGGAAC +
Preference number: 2 (lower is better)
Translates to: TLSRMHGPGLTLSMEEVGAAPKT*PWLGGN
Trigger: GTTCCCGCCTAGCCAGGGCCATGTCTTAGGTGCAGC...CCCCACCTCCTCCATGGACAGTGTGAGCCCCGGGCCGTGCATCCTGCTCAGTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
3UTR-3UTR CCA 90 bp TGCCCTGAAACTCACTGCCCTGGGATCCTGCCATCCAAACACGGGGACTGCAGGTGCCCAGGCCTCACCTaGCCGTGCTGTGGGCTGCTG +
Preference number: 2 (lower is better)
Translates to: CPETHCPGILPSKHGDCRCPGLT*PCCGLL
Trigger: CAGCAGCCCACAGCACGGCCAGGTGAGGCCTGGGCA...CCTGCAGTCCCCGTGTTTGGATGGCAGGATCCCAGGGCAGTGAGTTTCAGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376652.9
3UTR-3UTR TCA 90 bp GGTGGCATTGAGCAGGGCCCAGGTCCAGACAGCCCTCTGGCCAGATGTGACTGGACACACAGACACTGCTaGCGGGGACAGGGATGGCTC +
Preference number: 2 (lower is better)
Translates to: GGIEQGPGPDSPLARCDWTHRHC*RGQGWL
Trigger: GAGCCATCCCTGTCCCCGTCAGCAGTGTCTGTGTGT...CCAGTCACATCTGGCCAGAGGGCTGTCTGGACCTGGGCCCTGCTCAATGCCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
3UTR-3UTR TCA 90 bp GTGCCGCCCAGACCTACTGTCCCGGGGGTGTTATGGCTGTCCCTCGGCTTCCCCATGGCTCGGCCACTATaGGGCTGGACTCTTCTGTCT +
Preference number: 2 (lower is better)
Translates to: VPPRPTVPGVLWLSLGFPMARPL*GWTLLS
Trigger: AGACAGAAGAGTCCAGCCTCATAGTGGCCGAGCCAT...GGGGAAGCCGAGGGACAGCCATAACACCCCCGGGACAGTAGGTCTGGGCGGCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376666.3
ENST00000433259.6
3UTR-3UTR CCA 90 bp CACTCAAGTCCAGAGTTCCCAGTGGTGCCGCCCAGACCTACTGTCCCGGGGGTGGTCCAGAGTTCCCAGTaGTGCCGCCCAGACCTACTG +
Preference number: 2 (lower is better)
Translates to: HSSPEFPVVPPRPTVPGVVQSSQ*CRPDLL
Trigger: CAGTAGGTCTGGGCGGCACCACTGGGAACTCTGGAC...CACCCCCGGGACAGTAGGTCTGGGCGGCACCACTGGGAACTCTGGACTTGAGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
3UTR-3UTR CCA 90 bp ACACTGAGCAGGATGCACGGCCCGGGGCTCACACTGTCCATGGAGGAGGTGGGGCCGAGAGCTTGGTTCTaGGACTGTGGCTCAGCTGAC +
Preference number: 2 (lower is better)
Translates to: TLSRMHGPGLTLSMEEVGPRAWF*DCGSAD
Trigger: GTCAGCTGAGCCACAGTCCCAGAACCAAGCTCTCGG...CCCCACCTCCTCCATGGACAGTGTGAGCCCCGGGCCGTGCATCCTGCTCAGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
3UTR-3UTR CCA 90 bp CTGTGCAGGCCTCCACCACGTGGCTCCATCAGCATTCGCTGCAGCCCTGGGAGGCAAGCACTCGGGATGTaGGCTGGTCTGCAGTTTCCC +
Preference number: 2 (lower is better)
Translates to: LCRPPPRGSISIRCSPGRQALGM*AGLQFP
Trigger: GGGAAACTGCAGACCAGCCCACATCCCGAGTGCTTG...CCTCCCAGGGCTGCAGCGAATGCTGATGGAGCCACGTGGTGGAGGCCTGCACAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376652.9
3UTR-3UTR TCA 90 bp GCTCGTGCCGGGCACTGTACATTCACTGAAGCAGCTCAAGGGGCTCAGCCCCGACCCTGGGGAGGAAACTaGCAGGCTGGGAGACAAGAC +
Preference number: 2 (lower is better)
Translates to: ARAGHCTFTEAAQGAQPRPWGGN*QAGRQD
Trigger: GTCTTGTCTCCCAGCCTGTCAGTTTCCTCCCCAGGG...TCGGGGCTGAGCCCCTTGAGCTGCTTCAGTGAATGTACAGTGCCCGGCACGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
3UTR-3UTR GCA 90 bp ACTCAAGTCCAGAGTTCCCAGTGGTGCCGCCCAGACCTACTGTCCCGGGGGTGTGTCCCAGAGCCAGTGTaGAGAAAGTGCCAGCACGGC +
Preference number: 2 (lower is better)
Translates to: TQVQSSQWCRPDLLSRGCVPEPV*RKCQHG
Trigger: GCCGTGCTGGCACTTTCTGCACACTGGCTCTGGGAC...ACACCCCCGGGACAGTAGGTCTGGGCGGCACCACTGGGAACTCTGGACTTGAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
3UTR-3UTR GCA 90 bp GTGCCGGGCACTGTACATTCACTGAAGCAGCTCAAGGGGCTCAGCCCCGACACTCCCATCGCAGGGACATaGACAGCAGCAGCCACAGCC +
Preference number: 2 (lower is better)
Translates to: VPGTVHSLKQLKGLSPDTPIAGT*TAAATA
Trigger: GGCTGTGGCTGCTGCTGTGCATGTCCCTGCGATGGG...AGTGTCGGGGCTGAGCCCCTTGAGCTGCTTCAGTGAATGTACAGTGCCCGGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
3UTR-3UTR GCA 90 bp ACTCAAGTCCAGAGTTCCCAGTGGTGCCGCCCAGACCTACTGTCCCGGGGGTGTCAGAGTTCCCAGTGGTaGCGCCCAGACCTACTGTCC +
Preference number: 2 (lower is better)
Translates to: TQVQSSQWCRPDLLSRGCQSSQW*RPDLLS
Trigger: GGACAGTAGGTCTGGGCGGCACCACTGGGAACTCTG...ACACCCCCGGGACAGTAGGTCTGGGCGGCACCACTGGGAACTCTGGACTTGAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
3UTR-3UTR GCA 90 bp GCTCGTGCCGGGCACTGTACATTCACTGAAGCAGCTCAAGGGGCTCAGCCCCGACAGAGTTCCCAGTGGTaGCGCCCAGACCTACTGTCC +
Preference number: 2 (lower is better)
Translates to: ARAGHCTFTEAAQGAQPRQSSQW*RPDLLS
Trigger: GGACAGTAGGTCTGGGCGGCACCACTGGGAACTCTG...TCGGGGCTGAGCCCCTTGAGCTGCTTCAGTGAATGTACAGTGCCCGGCACGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
3UTR-3UTR CCA 90 bp GCCCCTGTCAACCTTTTATTGGGAGTGGAACACATGAGGTTCAGCTCGTGCCGGCCCGCGGACGGGGCATaGGGATGGGACAGGCAGGGA +
Preference number: 2 (lower is better)
Translates to: APVNLLLGVEHMRFSSCRPADGA*GWDRQG
Trigger: TCCCTGCCTGTCCCATCCCCATGCCCCGTCCGCGGG...CCGGCACGAGCTGAACCTCATGTGTTCCACTCCCAATAAAAGGTTGACAGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
3UTR-3UTR CCA 90 bp GTGCCGCCCAGACCTACTGTCCCGGGGGTGTTATGGCTGTCCCTCGGCTTCCCCCGATGTAATGAAAAATaGCCCCCAGAGCCCAGCTGG +
Preference number: 2 (lower is better)
Translates to: VPPRPTVPGVLWLSLGFPRCNEK*PPEPSW
Trigger: CCAGCTGGGCTCTGGGGGCCATTTTTCATTACATCG...GGGGAAGCCGAGGGACAGCCATAACACCCCCGGGACAGTAGGTCTGGGCGGCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000376666.3
ENST00000433259.6
3UTR-3UTR TCA 90 bp TCAAGTCCAGAGTTCCCAGTGGTGCCGCCCAGACCTACTGTCCCGGGGGTGTTAACACACAGACACTGCTaGCGGGGACAGGGATGGCTC +
Preference number: 2 (lower is better)
Translates to: SSPEFPVVPPRPTVPGVLTHRHC*RGQGWL
Trigger: GAGCCATCCCTGTCCCCGTCAGCAGTGTCTGTGTGT...TAACACCCCCGGGACAGTAGGTCTGGGCGGCACCACTGGGAACTCTGGACTTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
3UTR-3UTR TCA 90 bp TGCCCTGAAACTCACTGCCCTGGGATCCTGCCATCCAAACACGGGGACTGCAGGTGGGAGTGGAACACATaGGGTTCAGCTCGTGCCGGG +
Preference number: 2 (lower is better)
Translates to: CPETHCPGILPSKHGDCRWEWNT*GSARAG
Trigger: CCCGGCACGAGCTGAACCTCATGTGTTCCACTCCCA...CCTGCAGTCCCCGTGTTTGGATGGCAGGATCCCAGGGCAGTGAGTTTCAGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376652.9
3UTR-3UTR GCA 90 bp GTGCCGGGCACTGTACATTCACTGAAGCAGCTCAAGGGGCTCAGCCCCGACACTGTCCCAGAGCCAGTGTaGAGAAAGTGCCAGCACGGC +
Preference number: 2 (lower is better)
Translates to: VPGTVHSLKQLKGLSPDTVPEPV*RKCQHG
Trigger: GCCGTGCTGGCACTTTCTGCACACTGGCTCTGGGAC...AGTGTCGGGGCTGAGCCCCTTGAGCTGCTTCAGTGAATGTACAGTGCCCGGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
3UTR-3UTR GCA 90 bp GCTCGTGCCGGGCACTGTACATTCACTGAAGCAGCTCAAGGGGCTCAGCCCCGATGCCCCCTCAGTGTGTaGCTGTGGTTCTGTCCTGGT +
Preference number: 2 (lower is better)
Translates to: ARAGHCTFTEAAQGAQPRCPLSV*LWFCPG
Trigger: ACCAGGACAGAACCACAGGCACACACTGAGGGGGCA...TCGGGGCTGAGCCCCTTGAGCTGCTTCAGTGAATGTACAGTGCCCGGCACGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
3UTR-3UTR GCA 90 bp TCTGGGACTGTGGCTCAGCTGACCCGTGGCACAGCTGCACCTAAGACATGGCCCTGCCCCCTCAGTGTGTaGCTGTGGTTCTGTCCTGGT +
Preference number: 2 (lower is better)
Translates to: SGTVAQLTRGTAAPKTWPCPLSV*LWFCPG
Trigger: ACCAGGACAGAACCACAGGCACACACTGAGGGGGCA...GGGCCATGTCTTAGGTGCAGCTGTGCCACGGGTCAGCTGAGCCACAGTCCCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
3UTR-3UTR GCA 90 bp GCATCCGCCCATGCTGGGAGACTCCCTGAAAGGTGGGCACCTGCCGTCTATGAGTGCCCCCTCAGTGTGTaGCTGTGGTTCTGTCCTGGT +
Preference number: 2 (lower is better)
Translates to: ASAHAGRLPERWAPAVYECPLSV*LWFCPG
Trigger: ACCAGGACAGAACCACAGGCACACACTGAGGGGGCA...CTCATAGACGGCAGGTGCCCACCTTTCAGGGAGTCTCCCAGCATGGGCGGATGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
3UTR-3UTR GCA 90 bp TCAAGTCCAGAGTTCCCAGTGGTGCCGCCCAGACCTACTGTCCCGGGGGTGTTACAGGAAGGGGAGCTCTaGCCTGGGGAGGAAACTGAC +
Preference number: 2 (lower is better)
Translates to: SSPEFPVVPPRPTVPGVLQEGEL*PGEETD
Trigger: GTCAGTTTCCTCCCCAGGGCAGAGCTCCCCTTCCTG...TAACACCCCCGGGACAGTAGGTCTGGGCGGCACCACTGGGAACTCTGGACTTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
3UTR-3UTR CCA 90 bp TCTGGGACTGTGGCTCAGCTGACCCGTGGCACAGCTGCACCTAAGACATGGCCCCTGGCCAGATGTGACTaGAAGAGGCTGATGCCAGGG +
Preference number: 2 (lower is better)
Translates to: SGTVAQLTRGTAAPKTWPLARCD*KRLMPG
Trigger: CCCTGGCATCAGCCTCTTCCAGTCACATCTGGCCAG...GGGCCATGTCTTAGGTGCAGCTGTGCCACGGGTCAGCTGAGCCACAGTCCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
3UTR-3UTR CCA 90 bp CACTCAAGTCCAGAGTTCCCAGTGGTGCCGCCCAGACCTACTGTCCCGGGGGTGGTCCAGACAGCCCTCTaGCCAGATGTGACTGGAAGA +
Preference number: 2 (lower is better)
Translates to: HSSPEFPVVPPRPTVPGVVQTAL*PDVTGR
Trigger: TCTTCCAGTCACATCTGGCCAGAGGGCTGTCTGGAC...CACCCCCGGGACAGTAGGTCTGGGCGGCACCACTGGGAACTCTGGACTTGAGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
3UTR-3UTR CCA 90 bp CACCTGCCGTCTATGAGGAGGTGTCTCCCTCCATCATTAACCCCAAACCACACACCCGCGGACGGGGCATaGGGATGGGACAGGCAGGGA +
Preference number: 2 (lower is better)
Translates to: HLPSMRRCLPPSLTPNHTPADGA*GWDRQG
Trigger: TCCCTGCCTGTCCCATCCCCATGCCCCGTCCGCGGG...TGTGTGGTTTGGGGTTAATGATGGAGGGAGACACCTCCTCATAGACGGCAGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
3UTR-3UTR CCA 90 bp GTTTCTACACAAGCACTTGGCACCCACACGACAGAGACGTCACTCAAGCAGCACCCCGCGGACGGGGCATaGGGATGGGACAGGCAGGGA +
Preference number: 2 (lower is better)
Translates to: VSTQALGTHTTETSLKQHPADGA*GWDRQG
Trigger: TCCCTGCCTGTCCCATCCCCATGCCCCGTCCGCGGG...GTGCTGCTTGAGTGACGTCTCTGTCGTGTGGGTGCCAAGTGCTTGTGTAGAAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
3UTR-3UTR CCA 90 bp AGCCCCGACACTGACGCCACACTGAGCAGGATGCACGGCCCGGGGCTCACACTGAGGAGAGCAGGCCTCTaGGTGAACTCACACATTCAT +
Preference number: 2 (lower is better)
Translates to: SPDTDATLSRMHGPGLTLRRAGL*VNSHIH
Trigger: ATGAATGTGTGAGTTCACCCAGAGGCCTGCTCTCCT...CAGTGTGAGCCCCGGGCCGTGCATCCTGCTCAGTGTGGCGTCAGTGTCGGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
3UTR-3UTR TCA 90 bp CCCAAGGAAGAGGCAAACACACTCAAGTCCAGAGTTCCCAGTGGTGCCGCCCAGCCCTCTGGCCAGATGTaGCTGGAAGAGGCTGATGCC +
Preference number: 2 (lower is better)
Translates to: PKEEANTLKSRVPSGAAQPSGQM*LEEADA
Trigger: GGCATCAGCCTCTTCCAGTCACATCTGGCCAGAGGG...CTGGGCGGCACCACTGGGAACTCTGGACTTGAGTGTGTTTGCCTCTTCCTTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
3UTR-3UTR CCA 90 bp GGAGAAGCCCCTGTCAACCTTTTATTGGGAGTGGAACACATGAGGTTCAGCTCGGGGGTCAGCCCGAGGTaGGCGGATGGTGGCCCGAGA +
Preference number: 2 (lower is better)
Translates to: GEAPVNLLLGVEHMRFSSGVSPR*ADGGPR
Trigger: TCTCGGGCCACCATCCGCCCACCTCGGGCTGACCCC...CGAGCTGAACCTCATGTGTTCCACTCCCAATAAAAGGTTGACAGGGGCTTCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
3UTR-3UTR TCA 90 bp ACAAATAGTTTACAGCAGCTCATGCCCGGCATCCGCCCATGCTGGGAGACTCCCCCCTCTGGCCAGATGTaGCTGGAAGAGGCTGATGCC +
Preference number: 2 (lower is better)
Translates to: TNSLQQLMPGIRPCWETPPSGQM*LEEADA
Trigger: GGCATCAGCCTCTTCCAGTCACATCTGGCCAGAGGG...GGGAGTCTCCCAGCATGGGCGGATGCCGGGCATGAGCTGCTGTAAACTATTTGT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
3UTR-3UTR CCA 90 bp CCCAAGGAAGAGGCAAACACACTCAAGTCCAGAGTTCCCAGTGGTGCCGCCCAGCTGGCCAGATGTGACTaGAAGAGGCTGATGCCAGGG +
Preference number: 2 (lower is better)
Translates to: PKEEANTLKSRVPSGAAQLARCD*KRLMPG
Trigger: CCCTGGCATCAGCCTCTTCCAGTCACATCTGGCCAG...CTGGGCGGCACCACTGGGAACTCTGGACTTGAGTGTGTTTGCCTCTTCCTTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
3UTR-3UTR CCA 90 bp AACACAGTTTCTACACAAGCACTTGGCACCCACACGACAGAGACGTCACTCAAGCCCGCGGACGGGGCATaGGGATGGGACAGGCAGGGA +
Preference number: 2 (lower is better)
Translates to: NTVSTQALGTHTTETSLKPADGA*GWDRQG
Trigger: TCCCTGCCTGTCCCATCCCCATGCCCCGTCCGCGGG...CTTGAGTGACGTCTCTGTCGTGTGGGTGCCAAGTGCTTGTGTAGAAACTGTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
3UTR CAA 90 bp ACCCAGCCCAGGCGGGAGGGAGGAAACTGTTCCTCTTTTTGTCTTTaGTCCTTTCCTGCTCTGTGCAGGCCTCCACCACGTGGCTCCATC +
Preference number: 2 (lower is better)
Translates to: TQPRREGGNCSSFCL*SFPALCRPPPRGSI
Trigger: GATGGAGCCACGTGGTGGAGGCCTGCACAGAGCAGGAAAGGACAAAAGACAAAAAGAGGAACAGTTTCCTCCCTCCCGCCTGGGCTGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376652.9
3UTR-3UTR TCA 90 bp GCAAAGATTAAACTGGCTGTAGCTGTTAGGACATGGGGGAGGCCAGCACCGATGGCTCAGCCCCGACACTaGCGCCACACTGAGCAGGAT +
Preference number: 2 (lower is better)
Translates to: AKIKLAVAVRTWGRPAPMAQPRH*RHTEQD
Trigger: ATCCTGCTCAGTGTGGCGTCAGTGTCGGGGCTGAGC...CATCGGTGCTGGCCTCCCCCATGTCCTAACAGCTACAGCCAGTTTAATCTTTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376652.9
3UTR-3UTR TCA 90 bp GCCCCTGTCAACCTTTTATTGGGAGTGGAACACATGAGGTTCAGCTCGTGCCGGTGTGGCTCCTCAGGATaGAGTCACGTCCAGGACAGG +
Preference number: 2 (lower is better)
Translates to: APVNLLLGVEHMRFSSCRCGSSG*SHVQDR
Trigger: CCTGTCCTGGACGTGACTTCATCCTGAGGAGCCACA...CCGGCACGAGCTGAACCTCATGTGTTCCACTCCCAATAAAAGGTTGACAGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
3UTR-3UTR TCA 90 bp CAACCTTTTATTGGGAGTGGAACACATGAGGTTCAGCTCGTGCCGGGCACTGTAGTGACTGGAAGAGGCTaGTGCCAGGGCAGCACCAGG +
Preference number: 2 (lower is better)
Translates to: QPFIGSGTHEVQLVPGTVVTGRG*CQGSTR
Trigger: CCTGGTGCTGCCCTGGCATCAGCCTCTTCCAGTCAC...TACAGTGCCCGGCACGAGCTGAACCTCATGTGTTCCACTCCCAATAAAAGGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
3UTR-3UTR TCA 90 bp GTTTCTACACAAGCACTTGGCACCCACACGACAGAGACGTCACTCAAGCAGCACCCCTGGGGAGGAAACTaGCAGGCTGGGAGACAAGAC +
Preference number: 2 (lower is better)
Translates to: VSTQALGTHTTETSLKQHPWGGN*QAGRQD
Trigger: GTCTTGTCTCCCAGCCTGTCAGTTTCCTCCCCAGGG...GTGCTGCTTGAGTGACGTCTCTGTCGTGTGGGTGCCAAGTGCTTGTGTAGAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
3UTR-3UTR TCA 90 bp ACAAATAGTTTACAGCAGCTCATGCCCGGCATCCGCCCATGCTGGGAGACTCCCGAGCAGGCCTCTGGGTaGACTCACACATTCATACCC +
Preference number: 2 (lower is better)
Translates to: TNSLQQLMPGIRPCWETPEQASG*THTFIP
Trigger: GGGTATGAATGTGTGAGTTCACCCAGAGGCCTGCTC...GGGAGTCTCCCAGCATGGGCGGATGCCGGGCATGAGCTGCTGTAAACTATTTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
3UTR-3UTR GCA 90 bp TTCATACCCAAGGAAGAGGCAAACACACTCAAGTCCAGAGTTCCCAGTGGTGCCCCCATCGCAGGGACATaGACAGCAGCAGCCACAGCC +
Preference number: 2 (lower is better)
Translates to: FIPKEEANTLKSRVPSGAPIAGT*TAAATA
Trigger: GGCTGTGGCTGCTGCTGTGCATGTCCCTGCGATGGG...GGCACCACTGGGAACTCTGGACTTGAGTGTGTTTGCCTCTTCCTTGGGTATGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
3UTR-3UTR GCA 90 bp CAACCTTTTATTGGGAGTGGAACACATGAGGTTCAGCTCGTGCCGGGCACTGTACCCATCGCAGGGACATaGACAGCAGCAGCCACAGCC +
Preference number: 2 (lower is better)
Translates to: QPFIGSGTHEVQLVPGTVPIAGT*TAAATA
Trigger: GGCTGTGGCTGCTGCTGTGCATGTCCCTGCGATGGG...TACAGTGCCCGGCACGAGCTGAACCTCATGTGTTCCACTCCCAATAAAAGGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
3UTR-3UTR GCA 90 bp TTCAGGCACAAGCACTCGGGATGTGGGCTGGTCTGCAGTTTCCCTGGCATGCGAAACAGGGATCTCAGGTaGCAGGTGGGCAAATGCTAC +
Preference number: 2 (lower is better)
Translates to: FRHKHSGCGLVCSFPGMRNRDLR*QVGKCY
Trigger: GTAGCATTTGCCCACCTGGCACCTGAGATCCCTGTT...TCGCATGCCAGGGAAACTGCAGACCAGCCCACATCCCGAGTGCTTGTGCCTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376652.9
3UTR-3UTR CCA 90 bp GCCCCTGTCAACCTTTTATTGGGAGTGGAACACATGAGGTTCAGCTCGTGCCGGCTGGCCAGATGTGACTaGAAGAGGCTGATGCCAGGG +
Preference number: 2 (lower is better)
Translates to: APVNLLLGVEHMRFSSCRLARCD*KRLMPG
Trigger: CCCTGGCATCAGCCTCTTCCAGTCACATCTGGCCAG...CCGGCACGAGCTGAACCTCATGTGTTCCACTCCCAATAAAAGGTTGACAGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
3UTR-3UTR CCA 90 bp AGGAGAAGCCCCTGTCAACCTTTTATTGGGAGTGGAACACATGAGGTTCAGCTCGTCCCGGGGGTGTTATaGCTGTCCCTCGGCTTCCCC +
Preference number: 2 (lower is better)
Translates to: RRSPCQPFIGSGTHEVQLVPGVL*LSLGFP
Trigger: GGGGAAGCCGAGGGACAGCCATAACACCCCCGGGAC...GAGCTGAACCTCATGTGTTCCACTCCCAATAAAAGGTTGACAGGGGCTTCTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
3UTR-3UTR CCA 90 bp GATCTCAGGTGCCAGGTGGGCAAATGCTACTGTCGCTCAACGAGAGGAATCCCACCGAGAGCTTGGTTCTaGGACTGTGGCTCAGCTGAC +
Preference number: 2 (lower is better)
Translates to: DLRCQVGKCYCRSTRGIPPRAWF*DCGSAD
Trigger: GTCAGCTGAGCCACAGTCCCAGAACCAAGCTCTCGG...TGGGATTCCTCTCGTTGAGCGACAGTAGCATTTGCCCACCTGGCACCTGAGATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376652.9
3UTR CAA 90 bp CTCGGGATGTGGGCTGGTCTGCAGTTTCCCTGGCATGCGACACCTTaGGGACGCTTCCAGACCAAAACCAGATCCTTGCTGAACAGAATG +
Preference number: 2 (lower is better)
Translates to: LGMWAGLQFPWHATP*GRFQTKTRSLLNRM
Trigger: CATTCTGTTCAGCAAGGATCTGGTTTTGGTCTGGAAGCGTCCCAAAGGTGTCGCATGCCAGGGAAACTGCAGACCAGCCCACATCCCGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376652.9
3UTR-3UTR TCA 90 bp TTAACCCCAAACCACACAATGTGTGAGGAGAGCAGGCCTCTGGGTGAACTCACACCCTGGGGAGGAAACTaGCAGGCTGGGAGACAAGAC +
Preference number: 2 (lower is better)
Translates to: LTPNHTMCEESRPLGELTPWGGN*QAGRQD
Trigger: GTCTTGTCTCCCAGCCTGTCAGTTTCCTCCCCAGGG...TGTGAGTTCACCCAGAGGCCTGCTCTCCTCACACATTGTGTGGTTTGGGGTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
3UTR-3UTR TCA 90 bp CTGAAACTCACTGCCCTGGGATCCTGCCATCCAAACACGGGGACTGCAGGACTGCGTGTGAGACCTGTCTaGGCTTGTCAATGCACACAT +
Preference number: 2 (lower is better)
Translates to: LKLTALGSCHPNTGTAGLRVRPV*ACQCTH
Trigger: ATGTGTGCATTGACAAGCTCAGACAGGTCTCACACG...CAGTCCTGCAGTCCCCGTGTTTGGATGGCAGGATCCCAGGGCAGTGAGTTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376652.9
3UTR-3UTR GCA 90 bp TTAACCCCAAACCACACAATGTGTGAGGAGAGCAGGCCTCTGGGTGAACTCACAGTTCTGTCCTGGTCCTaGCCACTTGGAGCCCAGGCA +
Preference number: 2 (lower is better)
Translates to: LTPNHTMCEESRPLGELTVLSWS*PLGAQA
Trigger: TGCCTGGGCTCCAAGTGGGCAGGACCAGGACAGAAC...TGTGAGTTCACCCAGAGGCCTGCTCTCCTCACACATTGTGTGGTTTGGGGTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
3UTR-3UTR CCA 90 bp GAACAGCTCACAGTAGCGATACATTCACAGGACACAGTTGGTGTCCAGAAAAGGGTCCCGGGGGTGTTATaGCTGTCCCTCGGCTTCCCC +
Preference number: 2 (lower is better)
Translates to: EQLTVAIHSQDTVGVQKRVPGVL*LSLGFP
Trigger: GGGGAAGCCGAGGGACAGCCATAACACCCCCGGGAC...CCTTTTCTGGACACCAACTGTGTCCTGTGAATGTATCGCTACTGTGAGCTGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
3UTR-3UTR TCA 90 bp TCAGAACACAGTTTCTACACAAGCACTTGGCACCCACACGACAGAGACGTCACTACACACAGACACTGCTaGCGGGGACAGGGATGGCTC +
Preference number: 2 (lower is better)
Translates to: SEHSFYTSTWHPHDRDVTTHRHC*RGQGWL
Trigger: GAGCCATCCCTGTCCCCGTCAGCAGTGTCTGTGTGT...AGTGACGTCTCTGTCGTGTGGGTGCCAAGTGCTTGTGTAGAAACTGTGTTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
3UTR-3UTR TCA 90 bp AGAGAAGGAGAAGCCCCTGTCAACCTTTTATTGGGAGTGGAACACATGAGGTTCGCTCAGCCCCGACACTaGCGCCACACTGAGCAGGAT +
Preference number: 2 (lower is better)
Translates to: REGEAPVNLLLGVEHMRFAQPRH*RHTEQD
Trigger: ATCCTGCTCAGTGTGGCGTCAGTGTCGGGGCTGAGC...GAACCTCATGTGTTCCACTCCCAATAAAAGGTTGACAGGGGCTTCTCCTTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
3UTR-3UTR TCA 90 bp GGTACGCGGGCTGGGGTGGCATGTGGGGCGTGTGAGACCTGTCTGAGCTTGTCAACGTGTAGCTATTTTTaGCAAATGAGAGCCTACTTC +
Preference number: 2 (lower is better)
Translates to: GTRAGVACGACETCLSLSTCSYF*QMRAYF
Trigger: GAAGTAGGCTCTCATTTGTCAAAAATAGCTACACGT...TGACAAGCTCAGACAGGTCTCACACGCCCCACATGCCACCCCAGCCCGCGTACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000376652.9
3UTR-3UTR GCA 90 bp AACACAGTTTCTACACAAGCACTTGGCACCCACACGACAGAGACGTCACTCAAGGTCCCAGAGCCAGTGTaGAGAAAGTGCCAGCACGGC +
Preference number: 2 (lower is better)
Translates to: NTVSTQALGTHTTETSLKVPEPV*RKCQHG
Trigger: GCCGTGCTGGCACTTTCTGCACACTGGCTCTGGGAC...CTTGAGTGACGTCTCTGTCGTGTGGGTGCCAAGTGCTTGTGTAGAAACTGTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
3UTR-3UTR GCA 90 bp TCAGAACACAGTTTCTACACAAGCACTTGGCACCCACACGACAGAGACGTCACTCAGGAAGGGGAGCTCTaGCCTGGGGAGGAAACTGAC +
Preference number: 2 (lower is better)
Translates to: SEHSFYTSTWHPHDRDVTQEGEL*PGEETD
Trigger: GTCAGTTTCCTCCCCAGGGCAGAGCTCCCCTTCCTG...AGTGACGTCTCTGTCGTGTGGGTGCCAAGTGCTTGTGTAGAAACTGTGTTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
3UTR-3UTR GCA 90 bp AGAGAAGGAGAAGCCCCTGTCAACCTTTTATTGGGAGTGGAACACATGAGGTTCGCAGCCAGGACAGCCTaGACCGCCTCCCAGACTCTT +
Preference number: 2 (lower is better)
Translates to: REGEAPVNLLLGVEHMRFAARTA*TASQTL
Trigger: AAGAGTCTGGGAGGCGGTGCAGGCTGTCCTGGCTGC...GAACCTCATGTGTTCCACTCCCAATAAAAGGTTGACAGGGGCTTCTCCTTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
3UTR-3UTR CCA 90 bp CAACCTTTTATTGGGAGTGGAACACATGAGGTTCAGCTCGTGCCGGGCACTGTACCTAAGACATGGCCCTaGCTAGGCGGGAACAGCTCA +
Preference number: 2 (lower is better)
Translates to: QPFIGSGTHEVQLVPGTVPKTWP*LGGNSS
Trigger: TGAGCTGTTCCCGCCTAGCCAGGGCCATGTCTTAGG...TACAGTGCCCGGCACGAGCTGAACCTCATGTGTTCCACTCCCAATAAAAGGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
3UTR-3UTR TCA 90 bp AACTCACACATTCATACCCAAGGAAGAGGCAAACACACTCAAGTCCAGAGTTCCGTGACTGGAAGAGGCTaGTGCCAGGGCAGCACCAGG +
Preference number: 2 (lower is better)
Translates to: NSHIHTQGRGKHTQVQSSVTGRG*CQGSTR
Trigger: CCTGGTGCTGCCCTGGCATCAGCCTCTTCCAGTCAC...GGAACTCTGGACTTGAGTGTGTTTGCCTCTTCCTTGGGTATGAATGTGTGAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
3UTR-3UTR GCA 90 bp AGAGAAGGAGAAGCCCCTGTCAACCTTTTATTGGGAGTGGAACACATGAGGTTCGTCCCAGAGCCAGTGTaGAGAAAGTGCCAGCACGGC +
Preference number: 2 (lower is better)
Translates to: REGEAPVNLLLGVEHMRFVPEPV*RKCQHG
Trigger: GCCGTGCTGGCACTTTCTGCACACTGGCTCTGGGAC...GAACCTCATGTGTTCCACTCCCAATAAAAGGTTGACAGGGGCTTCTCCTTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
3UTR-3UTR GCA 90 bp AACTCACACATTCATACCCAAGGAAGAGGCAAACACACTCAAGTCCAGAGTTCCCCCATCGCAGGGACATaGACAGCAGCAGCCACAGCC +
Preference number: 2 (lower is better)
Translates to: NSHIHTQGRGKHTQVQSSPIAGT*TAAATA
Trigger: GGCTGTGGCTGCTGCTGTGCATGTCCCTGCGATGGG...GGAACTCTGGACTTGAGTGTGTTTGCCTCTTCCTTGGGTATGAATGTGTGAGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
3UTR-3UTR GCA 90 bp AACTCACACATTCATACCCAAGGAAGAGGCAAACACACTCAAGTCCAGAGTTCCCGCCTCCCAGACTCTTaGAGGAAGGGGAGCTCTGCC +
Preference number: 2 (lower is better)
Translates to: NSHIHTQGRGKHTQVQSSRLPDS*RKGSSA
Trigger: GGCAGAGCTCCCCTTCCTGCAAGAGTCTGGGAGGCG...GGAACTCTGGACTTGAGTGTGTTTGCCTCTTCCTTGGGTATGAATGTGTGAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
3UTR-3UTR CCA 90 bp GAACAGCTCACAGTAGCGATACATTCACAGGACACAGTTGGTGTCCAGAAAAGGGTCCAGAGTTCCCAGTaGTGCCGCCCAGACCTACTG +
Preference number: 2 (lower is better)
Translates to: EQLTVAIHSQDTVGVQKRVQSSQ*CRPDLL
Trigger: CAGTAGGTCTGGGCGGCACCACTGGGAACTCTGGAC...CCTTTTCTGGACACCAACTGTGTCCTGTGAATGTATCGCTACTGTGAGCTGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
3UTR-3UTR CCA 90 bp CTTGCTGAACAGAATGACATGGGGACTTGCAGCTCACTCGAGGTTATGTGCCCAAGACTCCCTGAAAGGTaGGCACCTGCCGTCTATGAG +
Preference number: 2 (lower is better)
Translates to: LAEQNDMGTCSSLEVMCPRLPER*APAVYE
Trigger: CTCATAGACGGCAGGTGCCCACCTTTCAGGGAGTCT...TGGGCACATAACCTCGAGTGAGCTGCAAGTCCCCATGTCATTCTGTTCAGCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376652.9
3UTR CAA 90 bp GTCCTCGAGAGGGATGTCGACAGGACTGGAAATACGCCACCCCCTTaGGCAGCTTTTCTAAGGTTTAGTAAACAGGGATCTCAGGTGCCA +
Preference number: 2 (lower is better)
Translates to: VLERDVDRTGNTPPP*AAFLRFSKQGSQVP
Trigger: TGGCACCTGAGATCCCTGTTTACTAAACCTTAGAAAAGCTGCCAAAGGGGGTGGCGTATTTCCAGTCCTGTCGACATCCCTCTCGAGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376652.9
3UTR CAA 90 bp TGGCATGCGACACCTTTGGGACGCTTCCAGACCAAAACCAGATCCTaGCTGAACAGAATGACATGGGGACTTGCAGCTCACTCGAGGTTA +
Preference number: 2 (lower is better)
Translates to: WHATPLGRFQTKTRS*LNRMTWGLAAHSRL
Trigger: TAACCTCGAGTGAGCTGCAAGTCCCCATGTCATTCTGTTCAGCAAGGATCTGGTTTTGGTCTGGAAGCGTCCCAAAGGTGTCGCATGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376652.9
3UTR-3UTR TCA 90 bp AGGAGAAGCCCCTGTCAACCTTTTATTGGGAGTGGAACACATGAGGTTCAGCTCGAGCAGGCCTCTGGGTaGACTCACACATTCATACCC +
Preference number: 2 (lower is better)
Translates to: RRSPCQPFIGSGTHEVQLEQASG*THTFIP
Trigger: GGGTATGAATGTGTGAGTTCACCCAGAGGCCTGCTC...GAGCTGAACCTCATGTGTTCCACTCCCAATAAAAGGTTGACAGGGGCTTCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
3UTR-3UTR TCA 90 bp GTAGCGATACATTCACAGGACACAGTTGGTGTCCAGAAAAGGGGGCTCAGAACAAAACCACACAATGTGTaGGGAGAGCAGGCCTCTGGG +
Preference number: 2 (lower is better)
Translates to: VAIHSQDTVGVQKRGLRTKPHNV*GEQASG
Trigger: CCCAGAGGCCTGCTCTCCTCACACATTGTGTGGTTT...TGTTCTGAGCCCCCTTTTCTGGACACCAACTGTGTCCTGTGAATGTATCGCTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
3UTR-3UTR TCA 90 bp AGGAGAAGCCCCTGTCAACCTTTTATTGGGAGTGGAACACATGAGGTTCAGCTCAAACCACACAATGTGTaGGGAGAGCAGGCCTCTGGG +
Preference number: 2 (lower is better)
Translates to: RRSPCQPFIGSGTHEVQLKPHNV*GEQASG
Trigger: CCCAGAGGCCTGCTCTCCTCACACATTGTGTGGTTT...GAGCTGAACCTCATGTGTTCCACTCCCAATAAAAGGTTGACAGGGGCTTCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
3UTR-3UTR TCA 90 bp TCAGAACACAGTTTCTACACAAGCACTTGGCACCCACACGACAGAGACGTCACTATGGCTCGGCCACTATaGGGCTGGACTCTTCTGTCT +
Preference number: 2 (lower is better)
Translates to: SEHSFYTSTWHPHDRDVTMARPL*GWTLLS
Trigger: AGACAGAAGAGTCCAGCCTCATAGTGGCCGAGCCAT...AGTGACGTCTCTGTCGTGTGGGTGCCAAGTGCTTGTGTAGAAACTGTGTTCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376666.3
ENST00000433259.6
3UTR-3UTR GCA 90 bp AACTCACACATTCATACCCAAGGAAGAGGCAAACACACTCAAGTCCAGAGTTCCTGCCCCCTCAGTGTGTaGCTGTGGTTCTGTCCTGGT +
Preference number: 2 (lower is better)
Translates to: NSHIHTQGRGKHTQVQSSCPLSV*LWFCPG
Trigger: ACCAGGACAGAACCACAGGCACACACTGAGGGGGCA...GGAACTCTGGACTTGAGTGTGTTTGCCTCTTCCTTGGGTATGAATGTGTGAGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
3UTR-3UTR CCA 90 bp GGAGAAGCCCCTGTCAACCTTTTATTGGGAGTGGAACACATGAGGTTCAGCTCGAGGAGAGCAGGCCTCTaGGTGAACTCACACATTCAT +
Preference number: 2 (lower is better)
Translates to: GEAPVNLLLGVEHMRFSSRRAGL*VNSHIH
Trigger: ATGAATGTGTGAGTTCACCCAGAGGCCTGCTCTCCT...CGAGCTGAACCTCATGTGTTCCACTCCCAATAAAAGGTTGACAGGGGCTTCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
3UTR-3UTR CCA 90 bp GAACAGCTCACAGTAGCGATACATTCACAGGACACAGTTGGTGTCCAGAAAAGGAGACTCCCTGAAAGGTaGGCACCTGCCGTCTATGAG +
Preference number: 2 (lower is better)
Translates to: EQLTVAIHSQDTVGVQKRRLPER*APAVYE
Trigger: CTCATAGACGGCAGGTGCCCACCTTTCAGGGAGTCT...CCTTTTCTGGACACCAACTGTGTCCTGTGAATGTATCGCTACTGTGAGCTGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
3UTR-3UTR CCA 90 bp GGAGAAGCCCCTGTCAACCTTTTATTGGGAGTGGAACACATGAGGTTCAGCTCGTTCACAGGACACAGTTaGTGTCCAGAAAAGGGGGCT +
Preference number: 2 (lower is better)
Translates to: GEAPVNLLLGVEHMRFSSFTGHS*CPEKGA
Trigger: AGCCCCCTTTTCTGGACACCAACTGTGTCCTGTGAA...CGAGCTGAACCTCATGTGTTCCACTCCCAATAAAAGGTTGACAGGGGCTTCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
3UTR-3UTR CCA 90 bp TCAGAACACAGTTTCTACACAAGCACTTGGCACCCACACGACAGAGACGTCACTCGATGTAATGAAAAATaGCCCCCAGAGCCCAGCTGG +
Preference number: 2 (lower is better)
Translates to: SEHSFYTSTWHPHDRDVTRCNEK*PPEPSW
Trigger: CCAGCTGGGCTCTGGGGGCCATTTTTCATTACATCG...AGTGACGTCTCTGTCGTGTGGGTGCCAAGTGCTTGTGTAGAAACTGTGTTCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000376666.3
ENST00000433259.6
3UTR-3UTR CCA 90 bp GTAGCGATACATTCACAGGACACAGTTGGTGTCCAGAAAAGGGGGCTCAGAACAAGGAGAGCAGGCCTCTaGGTGAACTCACACATTCAT +
Preference number: 2 (lower is better)
Translates to: VAIHSQDTVGVQKRGLRTRRAGL*VNSHIH
Trigger: ATGAATGTGTGAGTTCACCCAGAGGCCTGCTCTCCT...TGTTCTGAGCCCCCTTTTCTGGACACCAACTGTGTCCTGTGAATGTATCGCTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
3UTR CAA 90 bp ACTTTGCCGGGCCCAGAAATATTCCATGACTTATTTGGTGCACTTTaGGAAAACTTCCAGTTGTTTGCCTTTTTCAGGCATGAGGTCACC +
Preference number: 2 (lower is better)
Translates to: TLPGPEIFHDLFGAL*ENFQLFAFFRHEVT
Trigger: GGTGACCTCATGCCTGAAAAAGGCAAACAACTGGAAGTTTTCCAAAAGTGCACCAAATAAGTCATGGAATATTTCTGGGCCCGGCAAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376652.9
3UTR CAA 90 bp GAGAGCCTACTTCATTATCACAAAAGACACTCAGAGAGAAATGACTaGCATACTTTGCCGGGCCCAGAAATATTCCATGACTTATTTGGT +
Preference number: 2 (lower is better)
Translates to: ESLLHYHKRHSERND*HTLPGPEIFHDLFG
Trigger: ACCAAATAAGTCATGGAATATTTCTGGGCCCGGCAAAGTATGCAAGTCATTTCTCTCTGAGTGTCTTTTGTGATAATGAAGTAGGCTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376652.9
3UTR CAA 90 bp CTTCATTATCACAAAAGACACTCAGAGAGAAATGACTTGCATACTTaGCCGGGCCCAGAAATATTCCATGACTTATTTGGTGCACTTTTG +
Preference number: 2 (lower is better)
Translates to: LHYHKRHSERNDLHT*PGPEIFHDLFGALL
Trigger: CAAAAGTGCACCAAATAAGTCATGGAATATTTCTGGGCCCGGCAAAGTATGCAAGTCATTTCTCTCTGAGTGTCTTTTGTGATAATGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376652.9
3UTR GCA 72 bp CTGTCCCTCGGCTTCCCCAGAGCAGCCAGGACAGCCTaGACCGCCTCCCAGACTCTTGCAGGAAGGGGAGCT +
Preference number: 3 (lower is better)
Translates to: LSLGFPRAARTA*TASQTLAGRGA
Trigger: AGCTCCCCTTCCTGCAAGAGTCTGGGAGGCGGTGCAGGCTGTCCTGGCTGCTCTGGGGAAGCCGAGGGACAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
3UTR CCA 72 bp GTGGTGCCGCCCAGACCTACTGTCCCGGGGGTGTTATaGCTGTCCCTCGGCTTCCCCAGAGCAGCCAGGACA +
Preference number: 3 (lower is better)
Translates to: VVPPRPTVPGVL*LSLGFPRAART
Trigger: TGTCCTGGCTGCTCTGGGGAAGCCGAGGGACAGCCATAACACCCCCGGGACAGTAGGTCTGGGCGGCACCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
3UTR CCA 72 bp GGCCCAGGTCCAGACAGCCCTCTGGCCAGATGTGACTaGAAGAGGCTGATGCCAGGGCAGCACCAGGCCTTC +
Preference number: 3 (lower is better)
Translates to: GPGPDSPLARCD*KRLMPGQHQAF
Trigger: GAAGGCCTGGTGCTGCCCTGGCATCAGCCTCTTCCAGTCACATCTGGCCAGAGGGCTGTCTGGACCTGGGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
3UTR CCA 72 bp CCGGCATCCGCCCATGCTGGGAGACTCCCTGAAAGGTaGGCACCTGCCGTCTATGAGGAGGTGTCTCCCTCC +
Preference number: 3 (lower is better)
Translates to: PASAHAGRLPER*APAVYEEVSPS
Trigger: GGAGGGAGACACCTCCTCATAGACGGCAGGTGCCCACCTTTCAGGGAGTCTCCCAGCATGGGCGGATGCCGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
3UTR-3UTR CAA 90 bp ACTGAGCAGGATGCACGGCCCGGGGCTCACACTGTCCATGGAGGAGGTGGGGTCCGAGACACCGAGAGCTaGGTTCTGGGACTGTGGCTC +
Preference number: 3 (lower is better)
Translates to: TEQDARPGAHTVHGGGGVRDTES*VLGLWL
Trigger: GAGCCACAGTCCCAGAACCAAGCTCTCGGTGTCTCG...GACCCCACCTCCTCCATGGACAGTGTGAGCCCCGGGCCGTGCATCCTGCTCAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
3UTR TCA 72 bp ACTGAGGCAGCTCAGTGGGCAGCAATGGGTGCTAAGTaGTGTGGGGTACGCGGGCTGGGGTGGCATGTGGGG +
Preference number: 3 (lower is better)
Translates to: TEAAQWAAMGAK*CGVRGLGWHVG
Trigger: CCCCACATGCCACCCCAGCCCGCGTACCCCACATCACTTAGCACCCATTGCTGCCCACTGAGCTGCCTCAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376652.9
3UTR CCA 72 bp TTTGTCCTTTCCTGCTCTGTGCAGGCCTCCACCACGTaGCTCCATCAGCATTCGCTGCAGCCCTGGGAGGCC +
Preference number: 3 (lower is better)
Translates to: FVLSCSVQASTT*LHQHSLQPWEA
Trigger: GGCCTCCCAGGGCTGCAGCGAATGCTGATGGAGCCACGTGGTGGAGGCCTGCACAGAGCAGGAAAGGACAAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376652.9
3UTR GCA 72 bp GGCTTCAGGCACAAGCACTCGGGATGTGGGCTGGTCTaGAGTTTCCCTGGCATGCGACACCTTTGGGACGCT +
Preference number: 3 (lower is better)
Translates to: GFRHKHSGCGLV*SFPGMRHLWDA
Trigger: AGCGTCCCAAAGGTGTCGCATGCCAGGGAAACTGCAGACCAGCCCACATCCCGAGTGCTTGTGCCTGAAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376652.9
3UTR CCA 72 bp GCCAGTGTGCAGAAAGTGCCAGCACGGCCTGTGCTGTaGCTCCTCAGGATGAAGTCACGTCCAGGACAGGAG +
Preference number: 3 (lower is better)
Translates to: ASVQKVPARPVL*LLRMKSRPGQE
Trigger: CTCCTGTCCTGGACGTGACTTCATCCTGAGGAGCCACAGCACAGGCCGTGCTGGCACTTTCTGCACACTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
3UTR GCA 72 bp AGAGGCAAACACACTCAAGTCCAGAGTTCCCAGTGGTaGCGCCCAGACCTACTGTCCCGGGGGTGTTATGGC +
Preference number: 3 (lower is better)
Translates to: RGKHTQVQSSQW*RPDLLSRGCYG
Trigger: GCCATAACACCCCCGGGACAGTAGGTCTGGGCGGCACCACTGGGAACTCTGGACTTGAGTGTGTTTGCCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
3UTR-3UTR CAA 90 bp TCTGGGACTGTGGCTCAGCTGACCCGTGGCACAGCTGCACCTAAGACATGGCCCTTTCTACACAAGCACTaGGCACCCACACGACAGAGA +
Preference number: 3 (lower is better)
Translates to: SGTVAQLTRGTAAPKTWPFLHKH*APTRQR
Trigger: TCTCTGTCGTGTGGGTGCCAAGTGCTTGTGTAGAAA...GGGCCATGTCTTAGGTGCAGCTGTGCCACGGGTCAGCTGAGCCACAGTCCCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
3UTR TCA 72 bp ACACTGCTGACGGGGACAGGGATGGCTCGGCCACTATaGGGCTGGACTCTTCTGTCTGTTCAGGGAGTCGAT +
Preference number: 3 (lower is better)
Translates to: TLLTGTGMARPL*GWTLLSVQGVD
Trigger: ATCGACTCCCTGAACAGACAGAAGAGTCCAGCCTCATAGTGGCCGAGCCATCCCTGTCCCCGTCAGCAGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376666.3
ENST00000433259.6
3UTR TCA 72 bp AGGACAGGAGGGTTTATGCAGACACACAGACACTGCTaGCGGGGACAGGGATGGCTCGGCCACTATGAGGCT +
Preference number: 3 (lower is better)
Translates to: RTGGFMQTHRHC*RGQGWLGHYEA
Trigger: AGCCTCATAGTGGCCGAGCCATCCCTGTCCCCGTCAGCAGTGTCTGTGTGTCTGCATAAACCCTCCTGTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376666.3
ENST00000433259.6
3UTR TCA 72 bp GGGCTGGGGTGGCATGTGGGGCGTGTGAGACCTGTCTaGGCTTGTCAATGCACACATCCTGAGGGAACAGAA +
Preference number: 3 (lower is better)
Translates to: GLGWHVGRVRPV*ACQCTHPEGTE
Trigger: TTCTGTTCCCTCAGGATGTGTGCATTGACAAGCTCAGACAGGTCTCACACGCCCCACATGCCACCCCAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376652.9
3UTR GCA 72 bp CAACGTGGCAACGTCTGCTTATGCCCTGAAACTCACTaGCCTGGGATCCTGCCATCCAAACACGGGGACTGC +
Preference number: 3 (lower is better)
Translates to: QRGNVCLCPETH*PGILPSKHGDC
Trigger: GCAGTCCCCGTGTTTGGATGGCAGGATCCCAGGGCAGTGAGTTTCAGGGCATAAGCAGACGTTGCCACGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376652.9
3UTR CCA 72 bp GGAAGAGGCAAACACACTCAAGTCCAGAGTTCCCAGTaGTGCCGCCCAGACCTACTGTCCCGGGGGTGTTAT +
Preference number: 3 (lower is better)
Translates to: GRGKHTQVQSSQ*CRPDLLSRGCY
Trigger: ATAACACCCCCGGGACAGTAGGTCTGGGCGGCACCACTGGGAACTCTGGACTTGAGTGTGTTTGCCTCTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
3UTR CCA 72 bp CAAGCACTCGGGATGTGGGCTGGTCTGCAGTTTCCCTaGCATGCGACACCTTTGGGACGCTTCCAGACCAAA +
Preference number: 3 (lower is better)
Translates to: QALGMWAGLQFP*HATPLGRFQTK
Trigger: TTTGGTCTGGAAGCGTCCCAAAGGTGTCGCATGCCAGGGAAACTGCAGACCAGCCCACATCCCGAGTGCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376652.9
3UTR GCA 72 bp CAAGCAGCACAGCCACAAATAGTTTACAGCAGCTCATaGCCGGCATCCGCCCATGCTGGGAGACTCCCTGAA +
Preference number: 3 (lower is better)
Translates to: QAAQPQIVYSSS*PASAHAGRLPE
Trigger: TTCAGGGAGTCTCCCAGCATGGGCGGATGCCGGGCATGAGCTGCTGTAAACTATTTGTGGCTGTGCTGCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
3UTR CCA 72 bp CCACTGCTGTGTCCTCGAGAGGGATGTCGACAGGACTaGAAATACGCCACCCCCTTTGGCAGCTTTTCTAAG +
Preference number: 3 (lower is better)
Translates to: PLLCPREGCRQD*KYATPFGSFSK
Trigger: CTTAGAAAAGCTGCCAAAGGGGGTGGCGTATTTCCAGTCCTGTCGACATCCCTCTCGAGGACACAGCAGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376652.9
3UTR TCA 72 bp GGATTGAAGGCAACGTGGCAACGTCTGCTTATGCCCTaGAACTCACTGCCCTGGGATCCTGCCATCCAAACA +
Preference number: 3 (lower is better)
Translates to: GLKATWQRLLMP*NSLPWDPAIQT
Trigger: TGTTTGGATGGCAGGATCCCAGGGCAGTGAGTTTCAGGGCATAAGCAGACGTTGCCACGTTGCCTTCAATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376652.9
3UTR-3UTR CAA 90 bp GTTTCTACACAAGCACTTGGCACCCACACGACAGAGACGTCACTCAAGCAGCACTTTCTACACAAGCACTaGGCACCCACACGACAGAGA +
Preference number: 3 (lower is better)
Translates to: VSTQALGTHTTETSLKQHFLHKH*APTRQR
Trigger: TCTCTGTCGTGTGGGTGCCAAGTGCTTGTGTAGAAA...GTGCTGCTTGAGTGACGTCTCTGTCGTGTGGGTGCCAAGTGCTTGTGTAGAAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
3UTR GCA 72 bp TTAGTAAACAGGGATCTCAGGTGCCAGGTGGGCAAATaGTACTGTCGCTCAACGAGAGGAATCCCAGAGAAG +
Preference number: 3 (lower is better)
Translates to: LVNRDLRCQVGK*YCRSTRGIPEK
Trigger: CTTCTCTGGGATTCCTCTCGTTGAGCGACAGTAGCATTTGCCCACCTGGCACCTGAGATCCCTGTTTACTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376652.9
3UTR CCA 72 bp CAGACCAAAACCAGATCCTTGCTGAACAGAATGACATaGGGACTTGCAGCTCACTCGAGGTTATGTGCCCAG +
Preference number: 3 (lower is better)
Translates to: QTKTRSLLNRMT*GLAAHSRLCAQ
Trigger: CTGGGCACATAACCTCGAGTGAGCTGCAAGTCCCCATGTCATTCTGTTCAGCAAGGATCTGGTTTTGGTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376652.9
3UTR-3UTR CAA 90 bp AGGAGAAGCCCCTGTCAACCTTTTATTGGGAGTGGAACACATGAGGTTCAGCTCTTTCTACACAAGCACTaGGCACCCACACGACAGAGA +
Preference number: 3 (lower is better)
Translates to: RRSPCQPFIGSGTHEVQLFLHKH*APTRQR
Trigger: TCTCTGTCGTGTGGGTGCCAAGTGCTTGTGTAGAAA...GAGCTGAACCTCATGTGTTCCACTCCCAATAAAAGGTTGACAGGGGCTTCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
3UTR-3UTR CAA 90 bp GTAGCGATACATTCACAGGACACAGTTGGTGTCCAGAAAAGGGGGCTCAGAACATTTCTACACAAGCACTaGGCACCCACACGACAGAGA +
Preference number: 3 (lower is better)
Translates to: VAIHSQDTVGVQKRGLRTFLHKH*APTRQR
Trigger: TCTCTGTCGTGTGGGTGCCAAGTGCTTGTGTAGAAA...TGTTCTGAGCCCCCTTTTCTGGACACCAACTGTGTCCTGTGAATGTATCGCTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
3UTR TCA 72 bp CCTACTTCATTATCACAAAAGACACTCAGAGAGAAATaGCTTGCATACTTTGCCGGGCCCAGAAATATTCCA +
Preference number: 3 (lower is better)
Translates to: PTSLSQKTLREK*LAYFAGPRNIP
Trigger: TGGAATATTTCTGGGCCCGGCAAAGTATGCAAGTCATTTCTCTCTGAGTGTCTTTTGTGATAATGAAGTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376652.9
3UTR GCA 72 bp ACAAAAGACACTCAGAGAGAAATGACTTGCATACTTTaGCGGGCCCAGAAATATTCCATGACTTATTTGGTG +
Preference number: 3 (lower is better)
Translates to: TKDTQREMTCIL*RAQKYSMTYLV
Trigger: CACCAAATAAGTCATGGAATATTTCTGGGCCCGGCAAAGTATGCAAGTCATTTCTCTCTGAGTGTCTTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376652.9
CDS-3UTR GCA 90 bp AGCCCCGACACTGACGCCACACTGAGCAGGATGCACGGCCCGGGGCTCACACTGGGGAGGCCTGCAGGGTaGCCTCCACGCGTGGCAGGA +
Preference number: 4 (lower is better)
Translates to: SPDTDATLSRMHGPGLTLGRPAG*PPRVAG
Trigger: TCCTGCCACGCGTGGAGGGCACCCTGCAGGCCTCCC...CAGTGTGAGCCCCGGGCCGTGCATCCTGCTCAGTGTGGCGTCAGTGTCGGGGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CCA 90 bp CCGGGGGTGTTATGGCTGTCCCTCGGCTTCCCCAGAGCAGCCAGGACAGCCTGCGGGGTCAGCCCGAGGTaGGCGGATGGTGGCCCGAGA +
Preference number: 4 (lower is better)
Translates to: PGVLWLSLGFPRAARTACGVSPR*ADGGPR
Trigger: TCTCGGGCCACCATCCGCCCACCTCGGGCTGACCCC...GCAGGCTGTCCTGGCTGCTCTGGGGAAGCCGAGGGACAGCCATAACACCCCCGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CCA 90 bp CCCAGTGGTGCCGCCCAGACCTACTGTCCCGGGGGTGTTATGGCTGTCCCTCGGGTGGGGTACGCGGGCTaGGGTGGCATGTGGGGCGTG +
Preference number: 4 (lower is better)
Translates to: PSGAAQTYCPGGVMAVPRVGYAG*GGMWGV
Trigger: CACGCCCCACATGCCACCCCAGCCCGCGTACCCCAC...CCGAGGGACAGCCATAACACCCCCGGGACAGTAGGTCTGGGCGGCACCACTGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000376652.9
CDS-3UTR GCA 90 bp CCGGGGGTGTTATGGCTGTCCCTCGGCTTCCCCAGAGCAGCCAGGACAGCCTGCCCATCCTTAGCAGGCTaGCCCTCCACGCCGCCCAGG +
Preference number: 4 (lower is better)
Translates to: PGVLWLSLGFPRAARTACPSLAG*PSTPPR
Trigger: CCTGGGCGGCGTGGAGGGGCAGCCTGCTAAGGATGG...GCAGGCTGTCCTGGCTGCTCTGGGGAAGCCGAGGGACAGCCATAACACCCCCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
CDS-3UTR GCA 90 bp GACACTGACGCCACACTGAGCAGGATGCACGGCCCGGGGCTCACACTGTCCATGAGGCTTGCCGCAGGCTaGCCCTCCACGCCGCCCAGG +
Preference number: 4 (lower is better)
Translates to: DTDATLSRMHGPGLTLSMRLAAG*PSTPPR
Trigger: CCTGGGCGGCGTGGAGGGGCAGCCTGCGGCAAGCCT...CATGGACAGTGTGAGCCCCGGGCCGTGCATCCTGCTCAGTGTGGCGTCAGTGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433259.6
CDS-3UTR CCA 90 bp TCATGCCCGGCATCCGCCCATGCTGGGAGACTCCCTGAAAGGTGGGCACCTGCCCCCGCGGACGGGGCATaGGGATGGGACAGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: SCPASAHAGRLPERWAPAPADGA*GWDRQG
Trigger: TCCCTGCCTGTCCCATCCCCATGCCCCGTCCGCGGG...GGCAGGTGCCCACCTTTCAGGGAGTCTCCCAGCATGGGCGGATGCCGGGCATGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CCA 90 bp CGCCCAGACCTACTGTCCCGGGGGTGTTATGGCTGTCCCTCGGCTTCCCCAGAGCCCGCGGACGGGGCATaGGGATGGGACAGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: RPDLLSRGCYGCPSASPEPADGA*GWDRQG
Trigger: TCCCTGCCTGTCCCATCCCCATGCCCCGTCCGCGGG...CTCTGGGGAAGCCGAGGGACAGCCATAACACCCCCGGGACAGTAGGTCTGGGCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CCA 90 bp ACTGAGCAGGATGCACGGCCCGGGGCTCACACTGTCCATGGAGGAGGTGGGGTCGGGGTCAGCCCGAGGTaGGCGGATGGTGGCCCGAGA +
Preference number: 4 (lower is better)
Translates to: TEQDARPGAHTVHGGGGVGVSPR*ADGGPR
Trigger: TCTCGGGCCACCATCCGCCCACCTCGGGCTGACCCC...GACCCCACCTCCTCCATGGACAGTGTGAGCCCCGGGCCGTGCATCCTGCTCAGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR GCA 90 bp CAGCCAGGACAGCCTGCACCGCCTCCCAGACTCTTGCAGGAAGGGGAGCTCTGCCCGGGCCCCCGGGGCTaGCCTGGTGATGCTGAAGAA +
Preference number: 4 (lower is better)
Translates to: QPGQPAPPPRLLQEGELCPGPRG*PGDAEE
Trigger: TTCTTCAGCATCACCAGGGCAGCCCCGGGGGCCCGG...GCAGAGCTCCCCTTCCTGCAAGAGTCTGGGAGGCGGTGCAGGCTGTCCTGGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000433259.6
CDS-3UTR GCA 90 bp AGCCCCGACACTGACGCCACACTGAGCAGGATGCACGGCCCGGGGCTCACACTGCGCCCAAGTCCAGCATaGCCACGCTGCTCCCTCCTG +
Preference number: 4 (lower is better)
Translates to: SPDTDATLSRMHGPGLTLRPSPA*PRCSLL
Trigger: CAGGAGGGAGCAGCGTGGGCATGCTGGACTTGGGCG...CAGTGTGAGCCCCGGGCCGTGCATCCTGCTCAGTGTGGCGTCAGTGTCGGGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CCA 90 bp AGCCCCGACACTGACGCCACACTGAGCAGGATGCACGGCCCGGGGCTCACACTGCGATTCCCTAGGGCCTaGGCTCCGCCCCATGCACGT +
Preference number: 4 (lower is better)
Translates to: SPDTDATLSRMHGPGLTLRFPRA*APPHAR
Trigger: ACGTGCATGGGGCGGAGCCCAGGCCCTAGGGAATCG...CAGTGTGAGCCCCGGGCCGTGCATCCTGCTCAGTGTGGCGTCAGTGTCGGGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000354989.9
ENST00000360031.6
CDS-3UTR CCA 90 bp CCCAGTGGTGCCGCCCAGACCTACTGTCCCGGGGGTGTTATGGCTGTCCCTCGGATGCTGAAGAAGGCCTaGGTGGCGGTGGCCCGGTGC +
Preference number: 4 (lower is better)
Translates to: PSGAAQTYCPGGVMAVPRMLKKA*VAVARC
Trigger: GCACCGGGCCACCGCCACCCAGGCCTTCTTCAGCAT...CCGAGGGACAGCCATAACACCCCCGGGACAGTAGGTCTGGGCGGCACCACTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000433259.6
CDS-3UTR CCA 90 bp GGAGGTGGGGTCAGCCCGAGGTGGGCGGATGGTGGCCCGAGACACCGAGAGCTTGGGGGCCGGGTGAACTaGAAGACGTGTACTCGGGTG +
Preference number: 4 (lower is better)
Translates to: GGGVSPRWADGGPRHRELGGRVN*KTCTRV
Trigger: CACCCGAGTACACGTCTTCCAGTTCACCCGGCCCCC...AAGCTCTCGGTGTCTCGGGCCACCATCCGCCCACCTCGGGCTGACCCCACCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000433259.6
CDS-3UTR CCA 90 bp GTGCCGCCCAGACCTACTGTCCCGGGGGTGTTATGGCTGTCCCTCGGCTTCCCCGTCCCGGGGGTGTTATaGCTGTCCCTCGGCTTCCCC +
Preference number: 4 (lower is better)
Translates to: VPPRPTVPGVLWLSLGFPVPGVL*LSLGFP
Trigger: GGGGAAGCCGAGGGACAGCCATAACACCCCCGGGAC...GGGGAAGCCGAGGGACAGCCATAACACCCCCGGGACAGTAGGTCTGGGCGGCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CCA 90 bp GTGCCGCCCAGACCTACTGTCCCGGGGGTGTTATGGCTGTCCCTCGGCTTCCCCGAGGTGGGCGGATGGTaGCCCGAGACACCGAGAGCT +
Preference number: 4 (lower is better)
Translates to: VPPRPTVPGVLWLSLGFPEVGGW*PETPRA
Trigger: AGCTCTCGGTGTCTCGGGCCACCATCCGCCCACCTC...GGGGAAGCCGAGGGACAGCCATAACACCCCCGGGACAGTAGGTCTGGGCGGCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR TCA 90 bp TCATGCCCGGCATCCGCCCATGCTGGGAGACTCCCTGAAAGGTGGGCACCTGCCAGCCAGCTGTGGCCTTaGGGACCAGAGGGGTGGCCT +
Preference number: 4 (lower is better)
Translates to: SCPASAHAGRLPERWAPASQLWP*GPEGWP
Trigger: AGGCCACCCCTCTGGTCCTCAAGGCCACAGCTGGCT...GGCAGGTGCCCACCTTTCAGGGAGTCTCCCAGCATGGGCGGATGCCGGGCATGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000433259.6
CDS-3UTR TCA 90 bp CCCAGTGGTGCCGCCCAGACCTACTGTCCCGGGGGTGTTATGGCTGTCCCTCGGGGTGAGGTCCATGCATaGGAAGGGGCTGCTCTGCGG +
Preference number: 4 (lower is better)
Translates to: PSGAAQTYCPGGVMAVPRGEVHA*EGAALR
Trigger: CCGCAGAGCAGCCCCTTCTCATGCATGGACCTCACC...CCGAGGGACAGCCATAACACCCCCGGGACAGTAGGTCTGGGCGGCACCACTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR TCA 90 bp GGAGGTGGGGTCAGCCCGAGGTGGGCGGATGGTGGCCCGAGACACCGAGAGCTTACACACAGACACTGCTaGCGGGGACAGGGATGGCTC +
Preference number: 4 (lower is better)
Translates to: GGGVSPRWADGGPRHRELTHRHC*RGQGWL
Trigger: GAGCCATCCCTGTCCCCGTCAGCAGTGTCTGTGTGT...AAGCTCTCGGTGTCTCGGGCCACCATCCGCCCACCTCGGGCTGACCCCACCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR GCA 90 bp CCCAGTGGTGCCGCCCAGACCTACTGTCCCGGGGGTGTTATGGCTGTCCCTCGGACCCACGGAGACGAGTaGCCTTTTCCGGGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: PSGAAQTYCPGGVMAVPRTHGDE*PFPGSR
Trigger: CCTGCTCCCCGGAAAAGGGCACTCGTCTCCGTGGGT...CCGAGGGACAGCCATAACACCCCCGGGACAGTAGGTCTGGGCGGCACCACTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000433259.6
CDS-3UTR GCA 90 bp CACTCAAGTCCAGAGTTCCCAGTGGTGCCGCCCAGACCTACTGTCCCGGGGGTGCAGCCCCAGGGGGTATaGCACCTTCGCCACCCGCAG +
Preference number: 4 (lower is better)
Translates to: HSSPEFPVVPPRPTVPGVQPQGV*HLRHPQ
Trigger: CTGCGGGTGGCGAAGGTGGCATACCCCCTGGGGCTG...CACCCCCGGGACAGTAGGTCTGGGCGGCACCACTGGGAACTCTGGACTTGAGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000433259.6
CDS-3UTR GCA 90 bp CCTGCTCTGTGCAGGCCTCCACCACGTGGCTCCATCAGCATTCGCTGCAGCCCTCAGCCCCAGGGGGTATaGCACCTTCGCCACCCGCAG +
Preference number: 4 (lower is better)
Translates to: PALCRPPPRGSISIRCSPQPQGV*HLRHPQ
Trigger: CTGCGGGTGGCGAAGGTGGCATACCCCCTGGGGCTG...AGGGCTGCAGCGAATGCTGATGGAGCCACGTGGTGGAGGCCTGCACAGAGCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376652.9
CDS-3UTR GCA 90 bp CACTCAAGTCCAGAGTTCCCAGTGGTGCCGCCCAGACCTACTGTCCCGGGGGTGCCATCCTTAGCAGGCTaGCCCTCCACGCCGCCCAGG +
Preference number: 4 (lower is better)
Translates to: HSSPEFPVVPPRPTVPGVPSLAG*PSTPPR
Trigger: CCTGGGCGGCGTGGAGGGGCAGCCTGCTAAGGATGG...CACCCCCGGGACAGTAGGTCTGGGCGGCACCACTGGGAACTCTGGACTTGAGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
CDS-3UTR GCA 90 bp CCGGGGGTGTTATGGCTGTCCCTCGGCTTCCCCAGAGCAGCCAGGACAGCCTGCCGCCTCCCAGACTCTTaGAGGAAGGGGAGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: PGVLWLSLGFPRAARTACRLPDS*RKGSSA
Trigger: GGCAGAGCTCCCCTTCCTGCAAGAGTCTGGGAGGCG...GCAGGCTGTCCTGGCTGCTCTGGGGAAGCCGAGGGACAGCCATAACACCCCCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR GCA 90 bp GACACTGACGCCACACTGAGCAGGATGCACGGCCCGGGGCTCACACTGTCCATGTGCCAAGGACCGTGCTaGGGCTGCATGCACCGCGCG +
Preference number: 4 (lower is better)
Translates to: DTDATLSRMHGPGLTLSMCQGPC*GCMHRA
Trigger: CGCGCGGTGCATGCAGCCGCAGCACGGTCCTTGGCA...CATGGACAGTGTGAGCCCCGGGCCGTGCATCCTGCTCAGTGTGGCGTCAGTGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354989.9
CDS-3UTR CCA 90 bp CAGCCAGGACAGCCTGCACCGCCTCCCAGACTCTTGCAGGAAGGGGAGCTCTGCATGCTGAAGAAGGCCTaGGTGGCGGTGGCCCGGTGC +
Preference number: 4 (lower is better)
Translates to: QPGQPAPPPRLLQEGELCMLKKA*VAVARC
Trigger: GCACCGGGCCACCGCCACCCAGGCCTTCTTCAGCAT...GCAGAGCTCCCCTTCCTGCAAGAGTCTGGGAGGCGGTGCAGGCTGTCCTGGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000433259.6
CDS-3UTR CCA 90 bp GTGCCGCCCAGACCTACTGTCCCGGGGGTGTTATGGCTGTCCCTCGGCTTCCCCGGGGGCCGGGTGAACTaGAAGACGTGTACTCGGGTG +
Preference number: 4 (lower is better)
Translates to: VPPRPTVPGVLWLSLGFPGGRVN*KTCTRV
Trigger: CACCCGAGTACACGTCTTCCAGTTCACCCGGCCCCC...GGGGAAGCCGAGGGACAGCCATAACACCCCCGGGACAGTAGGTCTGGGCGGCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000433259.6
CDS-3UTR CCA 90 bp ACTGAGCAGGATGCACGGCCCGGGGCTCACACTGTCCATGGAGGAGGTGGGGTCGAGGTGGGCGGATGGTaGCCCGAGACACCGAGAGCT +
Preference number: 4 (lower is better)
Translates to: TEQDARPGAHTVHGGGGVEVGGW*PETPRA
Trigger: AGCTCTCGGTGTCTCGGGCCACCATCCGCCCACCTC...GACCCCACCTCCTCCATGGACAGTGTGAGCCCCGGGCCGTGCATCCTGCTCAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CCA 90 bp GACACTGACGCCACACTGAGCAGGATGCACGGCCCGGGGCTCACACTGTCCATGCCCGAGGTGGGCGGATaGTGGCCCGAGACACCGAGA +
Preference number: 4 (lower is better)
Translates to: DTDATLSRMHGPGLTLSMPEVGG*WPETPR
Trigger: TCTCGGTGTCTCGGGCCACCATCCGCCCACCTCGGG...CATGGACAGTGTGAGCCCCGGGCCGTGCATCCTGCTCAGTGTGGCGTCAGTGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CCA 90 bp CCAGAGTTCCCAGTGGTGCCGCCCAGACCTACTGTCCCGGGGGTGTTATGGCTGTGCCCAGGCCTCACCTaGCCGTGCTGTGGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: PEFPVVPPRPTVPGVLWLCPGLT*PCCGLL
Trigger: CAGCAGCCCACAGCACGGCCAGGTGAGGCCTGGGCA...CAGCCATAACACCCCCGGGACAGTAGGTCTGGGCGGCACCACTGGGAACTCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376652.9
CDS-3UTR CCA 90 bp GTGCCGCCCAGACCTACTGTCCCGGGGGTGTTATGGCTGTCCCTCGGCTTCCCCCATTCGCTGCAGCCCTaGGAGGCCCTAGGGCCAGAT +
Preference number: 4 (lower is better)
Translates to: VPPRPTVPGVLWLSLGFPHSLQP*EALGPD
Trigger: ATCTGGCCCTAGGGCCTCCCAGGGCTGCAGCGAATG...GGGGAAGCCGAGGGACAGCCATAACACCCCCGGGACAGTAGGTCTGGGCGGCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000376652.9
CDS-3UTR CCA 90 bp CGCCCAGACCTACTGTCCCGGGGGTGTTATGGCTGTCCCTCGGCTTCCCCAGAGGTACGCGGGCTGGGGTaGCATGTGGGGCGTGTGAGA +
Preference number: 4 (lower is better)
Translates to: RPDLLSRGCYGCPSASPEVRGLG*HVGRVR
Trigger: TCTCACACGCCCCACATGCCACCCCAGCCCGCGTAC...CTCTGGGGAAGCCGAGGGACAGCCATAACACCCCCGGGACAGTAGGTCTGGGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000376652.9
CDS-3UTR TCA 90 bp CCAGAGTTCCCAGTGGTGCCGCCCAGACCTACTGTCCCGGGGGTGTTATGGCTGAGCCAGCTGTGGCCTTaGGGACCAGAGGGGTGGCCT +
Preference number: 4 (lower is better)
Translates to: PEFPVVPPRPTVPGVLWLSQLWP*GPEGWP
Trigger: AGGCCACCCCTCTGGTCCTCAAGGCCACAGCTGGCT...CAGCCATAACACCCCCGGGACAGTAGGTCTGGGCGGCACCACTGGGAACTCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000433259.6
CDS-3UTR TCA 90 bp CGCCCAGACCTACTGTCCCGGGGGTGTTATGGCTGTCCCTCGGCTTCCCCAGAGGGCAGGAAGGCGATCTaGGTGGATCCTCCGCCCAAG +
Preference number: 4 (lower is better)
Translates to: RPDLLSRGCYGCPSASPEGRKAI*VDPPPK
Trigger: CTTGGGCGGAGGATCCACTCAGATCGCCTTCCTGCC...CTCTGGGGAAGCCGAGGGACAGCCATAACACCCCCGGGACAGTAGGTCTGGGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR TCA 90 bp CGCCCAGACCTACTGTCCCGGGGGTGTTATGGCTGTCCCTCGGCTTCCCCAGAGGGTGAGGTCCATGCATaGGAAGGGGCTGCTCTGCGG +
Preference number: 4 (lower is better)
Translates to: RPDLLSRGCYGCPSASPEGEVHA*EGAALR
Trigger: CCGCAGAGCAGCCCCTTCTCATGCATGGACCTCACC...CTCTGGGGAAGCCGAGGGACAGCCATAACACCCCCGGGACAGTAGGTCTGGGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR TCA 90 bp CAGCCAGGACAGCCTGCACCGCCTCCCAGACTCTTGCAGGAAGGGGAGCTCTGCGTGACTGGAAGAGGCTaGTGCCAGGGCAGCACCAGG +
Preference number: 4 (lower is better)
Translates to: QPGQPAPPPRLLQEGELCVTGRG*CQGSTR
Trigger: CCTGGTGCTGCCCTGGCATCAGCCTCTTCCAGTCAC...GCAGAGCTCCCCTTCCTGCAAGAGTCTGGGAGGCGGTGCAGGCTGTCCTGGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR TCA 90 bp CCCAGTGGTGCCGCCCAGACCTACTGTCCCGGGGGTGTTATGGCTGTCCCTCGGCCCTGGGGAGGAAACTaGCAGGCTGGGAGACAAGAC +
Preference number: 4 (lower is better)
Translates to: PSGAAQTYCPGGVMAVPRPWGGN*QAGRQD
Trigger: GTCTTGTCTCCCAGCCTGTCAGTTTCCTCCCCAGGG...CCGAGGGACAGCCATAACACCCCCGGGACAGTAGGTCTGGGCGGCACCACTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR TCA 90 bp CGCCCAGACCTACTGTCCCGGGGGTGTTATGGCTGTCCCTCGGCTTCCCCAGAGTGCTGGGAGACTCCCTaGAAGGTGGGCACCTGCCGT +
Preference number: 4 (lower is better)
Translates to: RPDLLSRGCYGCPSASPECWETP*KVGTCR
Trigger: ACGGCAGGTGCCCACCTTTCAGGGAGTCTCCCAGCA...CTCTGGGGAAGCCGAGGGACAGCCATAACACCCCCGGGACAGTAGGTCTGGGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR GCA 90 bp ACTGAGCAGGATGCACGGCCCGGGGCTCACACTGTCCATGGAGGAGGTGGGGTCACCCACGGAGACGAGTaGCCTTTTCCGGGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: TEQDARPGAHTVHGGGGVTHGDE*PFPGSR
Trigger: CCTGCTCCCCGGAAAAGGGCACTCGTCTCCGTGGGT...GACCCCACCTCCTCCATGGACAGTGTGAGCCCCGGGCCGTGCATCCTGCTCAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000433259.6
CDS-3UTR GCA 90 bp GCTCGTGCCGGGCACTGTACATTCACTGAAGCAGCTCAAGGGGCTCAGCCCCGACAGCCCCAGGGGGTATaGCACCTTCGCCACCCGCAG +
Preference number: 4 (lower is better)
Translates to: ARAGHCTFTEAAQGAQPRQPQGV*HLRHPQ
Trigger: CTGCGGGTGGCGAAGGTGGCATACCCCCTGGGGCTG...TCGGGGCTGAGCCCCTTGAGCTGCTTCAGTGAATGTACAGTGCCCGGCACGAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000433259.6
CDS-3UTR GCA 90 bp ACTCAAGTCCAGAGTTCCCAGTGGTGCCGCCCAGACCTACTGTCCCGGGGGTGTCCGGGCCCCCGGGGCTaGCCTGGTGATGCTGAAGAA +
Preference number: 4 (lower is better)
Translates to: TQVQSSQWCRPDLLSRGCPGPRG*PGDAEE
Trigger: TTCTTCAGCATCACCAGGGCAGCCCCGGGGGCCCGG...ACACCCCCGGGACAGTAGGTCTGGGCGGCACCACTGGGAACTCTGGACTTGAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000433259.6
CDS-3UTR GCA 90 bp GTGCCGGGCACTGTACATTCACTGAAGCAGCTCAAGGGGCTCAGCCCCGACACTGGGAGGCCTGCAGGGTaGCCTCCACGCGTGGCAGGA +
Preference number: 4 (lower is better)
Translates to: VPGTVHSLKQLKGLSPDTGRPAG*PPRVAG
Trigger: TCCTGCCACGCGTGGAGGGCACCCTGCAGGCCTCCC...AGTGTCGGGGCTGAGCCCCTTGAGCTGCTTCAGTGAATGTACAGTGCCCGGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR GCA 90 bp GTGCAGAAAGTGCCAGCACGGCCTGTGCTGTGGCTCCTCAGGATGAAGTCACGTCCGGGTGGGGAGGCCTaGAGGGTGCCCTCCACGCGT +
Preference number: 4 (lower is better)
Translates to: VQKVPARPVLWLLRMKSRPGGEA*RVPSTR
Trigger: ACGCGTGGAGGGCACCCTGCAGGCCTCCCCACCCGG...ACGTGACTTCATCCTGAGGAGCCACAGCACAGGCCGTGCTGGCACTTTCTGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR GCA 90 bp AGCCCCGACACTGACGCCACACTGAGCAGGATGCACGGCCCGGGGCTCACACTGGCAGCACACAGCTCGTaGAGGCTTGCCGCTGCTTTC +
Preference number: 4 (lower is better)
Translates to: SPDTDATLSRMHGPGLTLAAHSS*RLAAAF
Trigger: GAAAGCAGCGGCAAGCCTGCACGAGCTGTGTGCTGC...CAGTGTGAGCCCCGGGCCGTGCATCCTGCTCAGTGTGGCGTCAGTGTCGGGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
CDS-3UTR GCA 90 bp GTGCCGCCCAGACCTACTGTCCCGGGGGTGTTATGGCTGTCCCTCGGCTTCCCCGCAGCACACAGCTCGTaGAGGCTTGCCGCTGCTTTC +
Preference number: 4 (lower is better)
Translates to: VPPRPTVPGVLWLSLGFPAAHSS*RLAAAF
Trigger: GAAAGCAGCGGCAAGCCTGCACGAGCTGTGTGCTGC...GGGGAAGCCGAGGGACAGCCATAACACCCCCGGGACAGTAGGTCTGGGCGGCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
CDS-3UTR GCA 90 bp GACACTGACGCCACACTGAGCAGGATGCACGGCCCGGGGCTCACACTGTCCATGGGCAGGGAGCCACACTaGCCCCTCAGTGTGTGCCTG +
Preference number: 4 (lower is better)
Translates to: DTDATLSRMHGPGLTLSMGREPH*PLSVCL
Trigger: CAGGCACACACTGAGGGGGCAGTGTGGCTCCCTGCC...CATGGACAGTGTGAGCCCCGGGCCGTGCATCCTGCTCAGTGTGGCGTCAGTGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR GCA 90 bp ACTGAGCAGGATGCACGGCCCGGGGCTCACACTGTCCATGGAGGAGGTGGGGTCCCCATCGCAGGGACATaGACAGCAGCAGCCACAGCC +
Preference number: 4 (lower is better)
Translates to: TEQDARPGAHTVHGGGGVPIAGT*TAAATA
Trigger: GGCTGTGGCTGCTGCTGTGCATGTCCCTGCGATGGG...GACCCCACCTCCTCCATGGACAGTGTGAGCCCCGGGCCGTGCATCCTGCTCAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR GCA 90 bp CGCCCAGACCTACTGTCCCGGGGGTGTTATGGCTGTCCCTCGGCTTCCCCAGAGCGCCTCCCAGACTCTTaGAGGAAGGGGAGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: RPDLLSRGCYGCPSASPERLPDS*RKGSSA
Trigger: GGCAGAGCTCCCCTTCCTGCAAGAGTCTGGGAGGCG...CTCTGGGGAAGCCGAGGGACAGCCATAACACCCCCGGGACAGTAGGTCTGGGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR GCA 90 bp GTGCCGCCCAGACCTACTGTCCCGGGGGTGTTATGGCTGTCCCTCGGCTTCCCCCAGAGTTCCCAGTGGTaGCGCCCAGACCTACTGTCC +
Preference number: 4 (lower is better)
Translates to: VPPRPTVPGVLWLSLGFPQSSQW*RPDLLS
Trigger: GGACAGTAGGTCTGGGCGGCACCACTGGGAACTCTG...GGGGAAGCCGAGGGACAGCCATAACACCCCCGGGACAGTAGGTCTGGGCGGCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CCA 90 bp CAGCCAGGACAGCCTGCACCGCCTCCCAGACTCTTGCAGGAAGGGGAGCTCTGCGGGGGCCGGGTGAACTaGAAGACGTGTACTCGGGTG +
Preference number: 4 (lower is better)
Translates to: QPGQPAPPPRLLQEGELCGGRVN*KTCTRV
Trigger: CACCCGAGTACACGTCTTCCAGTTCACCCGGCCCCC...GCAGAGCTCCCCTTCCTGCAAGAGTCTGGGAGGCGGTGCAGGCTGTCCTGGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000433259.6
CDS-3UTR CCA 90 bp ACTGAGCAGGATGCACGGCCCGGGGCTCACACTGTCCATGGAGGAGGTGGGGTCGGTGCCCTCCACGCGTaGCAGGAAGGCGATCTGAGT +
Preference number: 4 (lower is better)
Translates to: TEQDARPGAHTVHGGGGVGALHA*QEGDLS
Trigger: ACTCAGATCGCCTTCCTGCCACGCGTGGAGGGCACC...GACCCCACCTCCTCCATGGACAGTGTGAGCCCCGGGCCGTGCATCCTGCTCAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CCA 90 bp TCATGCCCGGCATCCGCCCATGCTGGGAGACTCCCTGAAAGGTGGGCACCTGCCGGTGCCCTCCACGCGTaGCAGGAAGGCGATCTGAGT +
Preference number: 4 (lower is better)
Translates to: SCPASAHAGRLPERWAPAGALHA*QEGDLS
Trigger: ACTCAGATCGCCTTCCTGCCACGCGTGGAGGGCACC...GGCAGGTGCCCACCTTTCAGGGAGTCTCCCAGCATGGGCGGATGCCGGGCATGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CCA 90 bp AGCCCCGACACTGACGCCACACTGAGCAGGATGCACGGCCCGGGGCTCACACTGGTCCAGAGTTCCCAGTaGTGCCGCCCAGACCTACTG +
Preference number: 4 (lower is better)
Translates to: SPDTDATLSRMHGPGLTLVQSSQ*CRPDLL
Trigger: CAGTAGGTCTGGGCGGCACCACTGGGAACTCTGGAC...CAGTGTGAGCCCCGGGCCGTGCATCCTGCTCAGTGTGGCGTCAGTGTCGGGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CCA 90 bp GCTCGTGCCGGGCACTGTACATTCACTGAAGCAGCTCAAGGGGCTCAGCCCCGACCCGAGGTGGGCGGATaGTGGCCCGAGACACCGAGA +
Preference number: 4 (lower is better)
Translates to: ARAGHCTFTEAAQGAQPRPEVGG*WPETPR
Trigger: TCTCGGTGTCTCGGGCCACCATCCGCCCACCTCGGG...TCGGGGCTGAGCCCCTTGAGCTGCTTCAGTGAATGTACAGTGCCCGGCACGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR TCA 90 bp CTGTGCAGGCCTCCACCACGTGGCTCCATCAGCATTCGCTGCAGCCCTGGGAGGACACACAGACACTGCTaGCGGGGACAGGGATGGCTC +
Preference number: 4 (lower is better)
Translates to: LCRPPPRGSISIRCSPGRTHRHC*RGQGWL
Trigger: GAGCCATCCCTGTCCCCGTCAGCAGTGTCTGTGTGT...CCTCCCAGGGCTGCAGCGAATGCTGATGGAGCCACGTGGTGGAGGCCTGCACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376652.9
CDS-3UTR TCA 90 bp CCCAGTGGTGCCGCCCAGACCTACTGTCCCGGGGGTGTTATGGCTGTCCCTCGGTGTGGCTCCTCAGGATaGAGTCACGTCCAGGACAGG +
Preference number: 4 (lower is better)
Translates to: PSGAAQTYCPGGVMAVPRCGSSG*SHVQDR
Trigger: CCTGTCCTGGACGTGACTTCATCCTGAGGAGCCACA...CCGAGGGACAGCCATAACACCCCCGGGACAGTAGGTCTGGGCGGCACCACTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR TCA 90 bp GGTGGCATTGAGCAGGGCCCAGGTCCAGACAGCCCTCTGGCCAGATGTGACTGGGTGACTGGAAGAGGCTaGTGCCAGGGCAGCACCAGG +
Preference number: 4 (lower is better)
Translates to: GGIEQGPGPDSPLARCDWVTGRG*CQGSTR
Trigger: CCTGGTGCTGCCCTGGCATCAGCCTCTTCCAGTCAC...CCAGTCACATCTGGCCAGAGGGCTGTCTGGACCTGGGCCCTGCTCAATGCCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR TCA 90 bp CACTCAAGTCCAGAGTTCCCAGTGGTGCCGCCCAGACCTACTGTCCCGGGGGTGGCTCAGCCCCGACACTaGCGCCACACTGAGCAGGAT +
Preference number: 4 (lower is better)
Translates to: HSSPEFPVVPPRPTVPGVAQPRH*RHTEQD
Trigger: ATCCTGCTCAGTGTGGCGTCAGTGTCGGGGCTGAGC...CACCCCCGGGACAGTAGGTCTGGGCGGCACCACTGGGAACTCTGGACTTGAGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR TCA 90 bp ACTGAGCAGGATGCACGGCCCGGGGCTCACACTGTCCATGGAGGAGGTGGGGTCTGGGAGTGGAACACATaGGGTTCAGCTCGTGCCGGG +
Preference number: 4 (lower is better)
Translates to: TEQDARPGAHTVHGGGGVWEWNT*GSARAG
Trigger: CCCGGCACGAGCTGAACCTCATGTGTTCCACTCCCA...GACCCCACCTCCTCCATGGACAGTGTGAGCCCCGGGCCGTGCATCCTGCTCAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR GCA 90 bp ACTCAAGTCCAGAGTTCCCAGTGGTGCCGCCCAGACCTACTGTCCCGGGGGTGTCGCCCAAGTCCAGCATaGCCACGCTGCTCCCTCCTG +
Preference number: 4 (lower is better)
Translates to: TQVQSSQWCRPDLLSRGCRPSPA*PRCSLL
Trigger: CAGGAGGGAGCAGCGTGGGCATGCTGGACTTGGGCG...ACACCCCCGGGACAGTAGGTCTGGGCGGCACCACTGGGAACTCTGGACTTGAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR GCA 90 bp TCAAGTCCAGAGTTCCCAGTGGTGCCGCCCAGACCTACTGTCCCGGGGGTGTTACCATCCTTAGCAGGCTaGCCCTCCACGCCGCCCAGG +
Preference number: 4 (lower is better)
Translates to: SSPEFPVVPPRPTVPGVLPSLAG*PSTPPR
Trigger: CCTGGGCGGCGTGGAGGGGCAGCCTGCTAAGGATGG...TAACACCCCCGGGACAGTAGGTCTGGGCGGCACCACTGGGAACTCTGGACTTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
CDS-3UTR GCA 90 bp CACTCAAGTCCAGAGTTCCCAGTGGTGCCGCCCAGACCTACTGTCCCGGGGGTGCCCCCACCACCAGGCTaGCTCCCTTCTCCGCATCTA +
Preference number: 4 (lower is better)
Translates to: HSSPEFPVVPPRPTVPGVPPPPG*LPSPHL
Trigger: TAGATGCGGAGAAGGGAGGCAGCCTGGTGGTGGGGG...CACCCCCGGGACAGTAGGTCTGGGCGGCACCACTGGGAACTCTGGACTTGAGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR GCA 90 bp GAGCAGGGCCCAGGTCCAGACAGCCCTCTGGCCAGATGTGACTGGAAGAGGCTGGAGAAGGGGCTGCTCTaGGGCTGTGTCTCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: EQGPGPDSPLARCDWKRLEKGLL*GCVSRV
Trigger: GACCCTGGAGACACAGCCGCAGAGCAGCCCCTTCTC...CAGCCTCTTCCAGTCACATCTGGCCAGAGGGCTGTCTGGACCTGGGCCCTGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR GCA 90 bp CGCCCAGACCTACTGTCCCGGGGGTGTTATGGCTGTCCCTCGGCTTCCCCAGAGGTTCTGTCCTGGTCCTaGCCACTTGGAGCCCAGGCA +
Preference number: 4 (lower is better)
Translates to: RPDLLSRGCYGCPSASPEVLSWS*PLGAQA
Trigger: TGCCTGGGCTCCAAGTGGGCAGGACCAGGACAGAAC...CTCTGGGGAAGCCGAGGGACAGCCATAACACCCCCGGGACAGTAGGTCTGGGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR GCA 90 bp CCCAGTGGTGCCGCCCAGACCTACTGTCCCGGGGGTGTTATGGCTGTCCCTCGGTGCCCCCTCAGTGTGTaGCTGTGGTTCTGTCCTGGT +
Preference number: 4 (lower is better)
Translates to: PSGAAQTYCPGGVMAVPRCPLSV*LWFCPG
Trigger: ACCAGGACAGAACCACAGGCACACACTGAGGGGGCA...CCGAGGGACAGCCATAACACCCCCGGGACAGTAGGTCTGGGCGGCACCACTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR GCA 90 bp GCTCGTGCCGGGCACTGTACATTCACTGAAGCAGCTCAAGGGGCTCAGCCCCGAGGCAGGGAGCCACACTaGCCCCTCAGTGTGTGCCTG +
Preference number: 4 (lower is better)
Translates to: ARAGHCTFTEAAQGAQPRGREPH*PLSVCL
Trigger: CAGGCACACACTGAGGGGGCAGTGTGGCTCCCTGCC...TCGGGGCTGAGCCCCTTGAGCTGCTTCAGTGAATGTACAGTGCCCGGCACGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR GCA 90 bp GAGCAGGGCCCAGGTCCAGACAGCCCTCTGGCCAGATGTGACTGGAAGAGGCTGCCCATCGCAGGGACATaGACAGCAGCAGCCACAGCC +
Preference number: 4 (lower is better)
Translates to: EQGPGPDSPLARCDWKRLPIAGT*TAAATA
Trigger: GGCTGTGGCTGCTGCTGTGCATGTCCCTGCGATGGG...CAGCCTCTTCCAGTCACATCTGGCCAGAGGGCTGTCTGGACCTGGGCCCTGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR GCA 90 bp GGTGGCATTGAGCAGGGCCCAGGTCCAGACAGCCCTCTGGCCAGATGTGACTGGCGCCTCCCAGACTCTTaGAGGAAGGGGAGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: GGIEQGPGPDSPLARCDWRLPDS*RKGSSA
Trigger: GGCAGAGCTCCCCTTCCTGCAAGAGTCTGGGAGGCG...CCAGTCACATCTGGCCAGAGGGCTGTCTGGACCTGGGCCCTGCTCAATGCCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR GCA 90 bp CCCAGTGGTGCCGCCCAGACCTACTGTCCCGGGGGTGTTATGGCTGTCCCTCGGGTTTACAGCAGCTCATaGCCGGCATCCGCCCATGCT +
Preference number: 4 (lower is better)
Translates to: PSGAAQTYCPGGVMAVPRVYSSS*PASAHA
Trigger: AGCATGGGCGGATGCCGGGCATGAGCTGCTGTAAAC...CCGAGGGACAGCCATAACACCCCCGGGACAGTAGGTCTGGGCGGCACCACTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR GCA 90 bp GAGCAGGGCCCAGGTCCAGACAGCCCTCTGGCCAGATGTGACTGGAAGAGGCTGGTTTGCCAAGGACCGTaGTGCGGCTGCATGCACCGC +
Preference number: 4 (lower is better)
Translates to: EQGPGPDSPLARCDWKRLVCQGP*CGCMHR
Trigger: GCGGTGCATGCAGCCGCAGCACGGTCCTTGGCAAAC...CAGCCTCTTCCAGTCACATCTGGCCAGAGGGCTGTCTGGACCTGGGCCCTGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354989.9
CDS-3UTR GCA 90 bp CGCCCAGACCTACTGTCCCGGGGGTGTTATGGCTGTCCCTCGGCTTCCCCAGAGCCCACCGTACTTGGCTaGGATCTCGAAGTCCCCCAC +
Preference number: 4 (lower is better)
Translates to: RPDLLSRGCYGCPSASPEPTVLG*DLEVPH
Trigger: GTGGGGGACTTCGAGATCGCAGCCAAGTACGGTGGG...CTCTGGGGAAGCCGAGGGACAGCCATAACACCCCCGGGACAGTAGGTCTGGGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CCA 90 bp GTGCCGCCCAGACCTACTGTCCCGGGGGTGTTATGGCTGTCCCTCGGCTTCCCCGGACCTCTGACACTCTaGCAGCACACAGCTCGTGCA +
Preference number: 4 (lower is better)
Translates to: VPPRPTVPGVLWLSLGFPGPLTL*QHTARA
Trigger: TGCACGAGCTGTGTGCTGCCAGAGTGTCAGAGGTCC...GGGGAAGCCGAGGGACAGCCATAACACCCCCGGGACAGTAGGTCTGGGCGGCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CCA 90 bp GTGCCGCCCAGACCTACTGTCCCGGGGGTGTTATGGCTGTCCCTCGGCTTCCCCCTGGCCAGATGTGACTaGAAGAGGCTGATGCCAGGG +
Preference number: 4 (lower is better)
Translates to: VPPRPTVPGVLWLSLGFPLARCD*KRLMPG
Trigger: CCCTGGCATCAGCCTCTTCCAGTCACATCTGGCCAG...GGGGAAGCCGAGGGACAGCCATAACACCCCCGGGACAGTAGGTCTGGGCGGCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CCA 90 bp GCTCGTGCCGGGCACTGTACATTCACTGAAGCAGCTCAAGGGGCTCAGCCCCGAGTCCCGGGGGTGTTATaGCTGTCCCTCGGCTTCCCC +
Preference number: 4 (lower is better)
Translates to: ARAGHCTFTEAAQGAQPRVPGVL*LSLGFP
Trigger: GGGGAAGCCGAGGGACAGCCATAACACCCCCGGGAC...TCGGGGCTGAGCCCCTTGAGCTGCTTCAGTGAATGTACAGTGCCCGGCACGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CCA 90 bp CCGGGGGTGTTATGGCTGTCCCTCGGCTTCCCCAGAGCAGCCAGGACAGCCTGCCCGAGAGCTTGGTTCTaGGACTGTGGCTCAGCTGAC +
Preference number: 4 (lower is better)
Translates to: PGVLWLSLGFPRAARTACPRAWF*DCGSAD
Trigger: GTCAGCTGAGCCACAGTCCCAGAACCAAGCTCTCGG...GCAGGCTGTCCTGGCTGCTCTGGGGAAGCCGAGGGACAGCCATAACACCCCCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CCA 90 bp GTGCCGCCCAGACCTACTGTCCCGGGGGTGTTATGGCTGTCCCTCGGCTTCCCCCCGAGAGCTTGGTTCTaGGACTGTGGCTCAGCTGAC +
Preference number: 4 (lower is better)
Translates to: VPPRPTVPGVLWLSLGFPPRAWF*DCGSAD
Trigger: GTCAGCTGAGCCACAGTCCCAGAACCAAGCTCTCGG...GGGGAAGCCGAGGGACAGCCATAACACCCCCGGGACAGTAGGTCTGGGCGGCAC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CCA 90 bp GGGCTTCAGGCACAAGCACTCGGGATGTGGGCTGGTCTGCAGTTTCCCTGGCATCCCGAGGTGGGCGGATaGTGGCCCGAGACACCGAGA +
Preference number: 4 (lower is better)
Translates to: GLQAQALGMWAGLQFPWHPEVGG*WPETPR
Trigger: TCTCGGTGTCTCGGGCCACCATCCGCCCACCTCGGG...ATGCCAGGGAAACTGCAGACCAGCCCACATCCCGAGTGCTTGTGCCTGAAGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376652.9
CDS-3UTR CCA 90 bp CGTCCAGGACAGGAGGGTTTATGCAGACACACAGACACTGCTGACGGGGACAGGGGGGTCAGCCCGAGGTaGGCGGATGGTGGCCCGAGA +
Preference number: 4 (lower is better)
Translates to: RPGQEGLCRHTDTADGDRGVSPR*ADGGPR
Trigger: TCTCGGGCCACCATCCGCCCACCTCGGGCTGACCCC...CCTGTCCCCGTCAGCAGTGTCTGTGTGTCTGCATAAACCCTCCTGTCCTGGACG
64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CCA 90 bp ACACTGAGCAGGATGCACGGCCCGGGGCTCACACTGTCCATGGAGGAGGTGGGGCAGGCCTCCACCACGTaGCTCCATCAGCATTCGCTG +
Preference number: 4 (lower is better)
Translates to: TLSRMHGPGLTLSMEEVGQASTT*LHQHSL
Trigger: CAGCGAATGCTGATGGAGCCACGTGGTGGAGGCCTG...CCCCACCTCCTCCATGGACAGTGTGAGCCCCGGGCCGTGCATCCTGCTCAGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376652.9
CDS-3UTR TCA 90 bp GTGCCGGGCACTGTACATTCACTGAAGCAGCTCAAGGGGCTCAGCCCCGACACTAGCCAGCTGTGGCCTTaGGGACCAGAGGGGTGGCCT +
Preference number: 4 (lower is better)
Translates to: VPGTVHSLKQLKGLSPDTSQLWP*GPEGWP
Trigger: AGGCCACCCCTCTGGTCCTCAAGGCCACAGCTGGCT...AGTGTCGGGGCTGAGCCCCTTGAGCTGCTTCAGTGAATGTACAGTGCCCGGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000433259.6
CDS-3UTR TCA 90 bp TCAAGTCCAGAGTTCCCAGTGGTGCCGCCCAGACCTACTGTCCCGGGGGTGTTAAGCCAGCTGTGGCCTTaGGGACCAGAGGGGTGGCCT +
Preference number: 4 (lower is better)
Translates to: SSPEFPVVPPRPTVPGVLSQLWP*GPEGWP
Trigger: AGGCCACCCCTCTGGTCCTCAAGGCCACAGCTGGCT...TAACACCCCCGGGACAGTAGGTCTGGGCGGCACCACTGGGAACTCTGGACTTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000433259.6
CDS-3UTR TCA 90 bp GCATCCGCCCATGCTGGGAGACTCCCTGAAAGGTGGGCACCTGCCGTCTATGAGGGCAGGAAGGCGATCTaGGTGGATCCTCCGCCCAAG +
Preference number: 4 (lower is better)
Translates to: ASAHAGRLPERWAPAVYEGRKAI*VDPPPK
Trigger: CTTGGGCGGAGGATCCACTCAGATCGCCTTCCTGCC...CTCATAGACGGCAGGTGCCCACCTTTCAGGGAGTCTCCCAGCATGGGCGGATGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR TCA 90 bp GGAGGTGGGGTCAGCCCGAGGTGGGCGGATGGTGGCCCGAGACACCGAGAGCTTGTTTTGAAGGACCTCTaGCACTCTGGCAGCACACAG +
Preference number: 4 (lower is better)
Translates to: GGGVSPRWADGGPRHRELVLKDL*HSGSTQ
Trigger: CTGTGTGCTGCCAGAGTGTCAGAGGTCCTTCAAAAC...AAGCTCTCGGTGTCTCGGGCCACCATCCGCCCACCTCGGGCTGACCCCACCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR TCA 90 bp ACTGAGCAGGATGCACGGCCCGGGGCTCACACTGTCCATGGAGGAGGTGGGGTCCCTTCTCCGCATCTATaGGGCCCACACCAGCTGCAA +
Preference number: 4 (lower is better)
Translates to: TEQDARPGAHTVHGGGGVPSPHL*GPHQLQ
Trigger: TTGCAGCTGGTGTGGGCCTCATAGATGCGGAGAAGG...GACCCCACCTCCTCCATGGACAGTGTGAGCCCCGGGCCGTGCATCCTGCTCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR TCA 90 bp TCATGCCCGGCATCCGCCCATGCTGGGAGACTCCCTGAAAGGTGGGCACCTGCCCCTTCTCCGCATCTATaGGGCCCACACCAGCTGCAA +
Preference number: 4 (lower is better)
Translates to: SCPASAHAGRLPERWAPAPSPHL*GPHQLQ
Trigger: TTGCAGCTGGTGTGGGCCTCATAGATGCGGAGAAGG...GGCAGGTGCCCACCTTTCAGGGAGTCTCCCAGCATGGGCGGATGCCGGGCATGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR TCA 90 bp GCATCCGCCCATGCTGGGAGACTCCCTGAAAGGTGGGCACCTGCCGTCTATGAGGGTGAGGTCCATGCATaGGAAGGGGCTGCTCTGCGG +
Preference number: 4 (lower is better)
Translates to: ASAHAGRLPERWAPAVYEGEVHA*EGAALR
Trigger: CCGCAGAGCAGCCCCTTCTCATGCATGGACCTCACC...CTCATAGACGGCAGGTGCCCACCTTTCAGGGAGTCTCCCAGCATGGGCGGATGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR TCA 90 bp CCGGGGGTGTTATGGCTGTCCCTCGGCTTCCCCAGAGCAGCCAGGACAGCCTGCATGGCTCGGCCACTATaGGGCTGGACTCTTCTGTCT +
Preference number: 4 (lower is better)
Translates to: PGVLWLSLGFPRAARTACMARPL*GWTLLS
Trigger: AGACAGAAGAGTCCAGCCTCATAGTGGCCGAGCCAT...GCAGGCTGTCCTGGCTGCTCTGGGGAAGCCGAGGGACAGCCATAACACCCCCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR TCA 90 bp CCGGGGGTGTTATGGCTGTCCCTCGGCTTCCCCAGAGCAGCCAGGACAGCCTGCGAGCAGGCCTCTGGGTaGACTCACACATTCATACCC +
Preference number: 4 (lower is better)
Translates to: PGVLWLSLGFPRAARTACEQASG*THTFIP
Trigger: GGGTATGAATGTGTGAGTTCACCCAGAGGCCTGCTC...GCAGGCTGTCCTGGCTGCTCTGGGGAAGCCGAGGGACAGCCATAACACCCCCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR TCA 90 bp GCATCCGCCCATGCTGGGAGACTCCCTGAAAGGTGGGCACCTGCCGTCTATGAGGCTCAGCCCCGACACTaGCGCCACACTGAGCAGGAT +
Preference number: 4 (lower is better)
Translates to: ASAHAGRLPERWAPAVYEAQPRH*RHTEQD
Trigger: ATCCTGCTCAGTGTGGCGTCAGTGTCGGGGCTGAGC...CTCATAGACGGCAGGTGCCCACCTTTCAGGGAGTCTCCCAGCATGGGCGGATGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR TCA 90 bp CCAGAGTTCCCAGTGGTGCCGCCCAGACCTACTGTCCCGGGGGTGTTATGGCTGTGGGAGTGGAACACATaGGGTTCAGCTCGTGCCGGG +
Preference number: 4 (lower is better)
Translates to: PEFPVVPPRPTVPGVLWLWEWNT*GSARAG
Trigger: CCCGGCACGAGCTGAACCTCATGTGTTCCACTCCCA...CAGCCATAACACCCCCGGGACAGTAGGTCTGGGCGGCACCACTGGGAACTCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR GCA 90 bp CCCAAGGAAGAGGCAAACACACTCAAGTCCAGAGTTCCCAGTGGTGCCGCCCAGCCGGGCCCCCGGGGCTaGCCTGGTGATGCTGAAGAA +
Preference number: 4 (lower is better)
Translates to: PKEEANTLKSRVPSGAAQPGPRG*PGDAEE
Trigger: TTCTTCAGCATCACCAGGGCAGCCCCGGGGGCCCGG...CTGGGCGGCACCACTGGGAACTCTGGACTTGAGTGTGTTTGCCTCTTCCTTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000433259.6
CDS-3UTR GCA 90 bp CGCCCAGACCTACTGTCCCGGGGGTGTTATGGCTGTCCCTCGGCTTCCCCAGAGCCAGCATGCCCACGCTaGTCCCTCCTGGAGTTTTCA +
Preference number: 4 (lower is better)
Translates to: RPDLLSRGCYGCPSASPEPACPR*SLLEFS
Trigger: TGAAAACTCCAGGAGGGAGCAGCGTGGGCATGCTGG...CTCTGGGGAAGCCGAGGGACAGCCATAACACCCCCGGGACAGTAGGTCTGGGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR GCA 90 bp GTGCTGTGGCTCCTCAGGATGAAGTCACGTCCAGGACAGGAGGGTTTATGCAGACCGGGTGGGGAGGCCTaGAGGGTGCCCTCCACGCGT +
Preference number: 4 (lower is better)
Translates to: VLWLLRMKSRPGQEGLCRPGGEA*RVPSTR
Trigger: ACGCGTGGAGGGCACCCTGCAGGCCTCCCCACCCGG...TCTGCATAAACCCTCCTGTCCTGGACGTGACTTCATCCTGAGGAGCCACAGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR GCA 90 bp ACTGAGCAGGATGCACGGCCCGGGGCTCACACTGTCCATGGAGGAGGTGGGGTCGTTAAACATCCGCAGTaGCGTCAGGTAGCCGGGTGG +
Preference number: 4 (lower is better)
Translates to: TEQDARPGAHTVHGGGGVVKHPQ*RQVAGW
Trigger: CCACCCGGCTACCTGACGGCACTGCGGATGTTTAAC...GACCCCACCTCCTCCATGGACAGTGTGAGCCCCGGGCCGTGCATCCTGCTCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR GCA 90 bp TCTGGGACTGTGGCTCAGCTGACCCGTGGCACAGCTGCACCTAAGACATGGCCCCCCCCACCACCAGGCTaGCTCCCTTCTCCGCATCTA +
Preference number: 4 (lower is better)
Translates to: SGTVAQLTRGTAAPKTWPPPPPG*LPSPHL
Trigger: TAGATGCGGAGAAGGGAGGCAGCCTGGTGGTGGGGG...GGGCCATGTCTTAGGTGCAGCTGTGCCACGGGTCAGCTGAGCCACAGTCCCAGA
63% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR GCA 90 bp GCTCGTGCCGGGCACTGTACATTCACTGAAGCAGCTCAAGGGGCTCAGCCCCGAGAGAAGGGGCTGCTCTaGGGCTGTGTCTCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: ARAGHCTFTEAAQGAQPREKGLL*GCVSRV
Trigger: GACCCTGGAGACACAGCCGCAGAGCAGCCCCTTCTC...TCGGGGCTGAGCCCCTTGAGCTGCTTCAGTGAATGTACAGTGCCCGGCACGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR GCA 90 bp TCATGCCCGGCATCCGCCCATGCTGGGAGACTCCCTGAAAGGTGGGCACCTGCCTGCATGAGAAGGGGCTaGTCTGCGGCTGTGTCTCCA +
Preference number: 4 (lower is better)
Translates to: SCPASAHAGRLPERWAPACMRRG*SAAVSP
Trigger: TGGAGACACAGCCGCAGAGCAGCCCCTTCTCATGCA...GGCAGGTGCCCACCTTTCAGGGAGTCTCCCAGCATGGGCGGATGCCGGGCATGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR GCA 90 bp TCTGGGACTGTGGCTCAGCTGACCCGTGGCACAGCTGCACCTAAGACATGGCCCCCCATCGCAGGGACATaGACAGCAGCAGCCACAGCC +
Preference number: 4 (lower is better)
Translates to: SGTVAQLTRGTAAPKTWPPIAGT*TAAATA
Trigger: GGCTGTGGCTGCTGCTGTGCATGTCCCTGCGATGGG...GGGCCATGTCTTAGGTGCAGCTGTGCCACGGGTCAGCTGAGCCACAGTCCCAGA
63% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR GCA 90 bp GGTGGCATTGAGCAGGGCCCAGGTCCAGACAGCCCTCTGGCCAGATGTGACTGGCAGGAAGGGGAGCTCTaGCCTGGGGAGGAAACTGAC +
Preference number: 4 (lower is better)
Translates to: GGIEQGPGPDSPLARCDWQEGEL*PGEETD
Trigger: GTCAGTTTCCTCCCCAGGGCAGAGCTCCCCTTCCTG...CCAGTCACATCTGGCCAGAGGGCTGTCTGGACCTGGGCCCTGCTCAATGCCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR GCA 90 bp GACACTGACGCCACACTGAGCAGGATGCACGGCCCGGGGCTCACACTGTCCATGCAGGAAGGGGAGCTCTaGCCTGGGGAGGAAACTGAC +
Preference number: 4 (lower is better)
Translates to: DTDATLSRMHGPGLTLSMQEGEL*PGEETD
Trigger: GTCAGTTTCCTCCCCAGGGCAGAGCTCCCCTTCCTG...CATGGACAGTGTGAGCCCCGGGCCGTGCATCCTGCTCAGTGTGGCGTCAGTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR GCA 90 bp GCTCGTGCCGGGCACTGTACATTCACTGAAGCAGCTCAAGGGGCTCAGCCCCGAGCAGCCAGGACAGCCTaGACCGCCTCCCAGACTCTT +
Preference number: 4 (lower is better)
Translates to: ARAGHCTFTEAAQGAQPRAARTA*TASQTL
Trigger: AAGAGTCTGGGAGGCGGTGCAGGCTGTCCTGGCTGC...TCGGGGCTGAGCCCCTTGAGCTGCTTCAGTGAATGTACAGTGCCCGGCACGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR GCA 90 bp TCTGGGACTGTGGCTCAGCTGACCCGTGGCACAGCTGCACCTAAGACATGGCCCGCAGCCAGGACAGCCTaGACCGCCTCCCAGACTCTT +
Preference number: 4 (lower is better)
Translates to: SGTVAQLTRGTAAPKTWPAARTA*TASQTL
Trigger: AAGAGTCTGGGAGGCGGTGCAGGCTGTCCTGGCTGC...GGGCCATGTCTTAGGTGCAGCTGTGCCACGGGTCAGCTGAGCCACAGTCCCAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR GCA 90 bp GCATCCGCCCATGCTGGGAGACTCCCTGAAAGGTGGGCACCTGCCGTCTATGAGGCAGCCAGGACAGCCTaGACCGCCTCCCAGACTCTT +
Preference number: 4 (lower is better)
Translates to: ASAHAGRLPERWAPAVYEAARTA*TASQTL
Trigger: AAGAGTCTGGGAGGCGGTGCAGGCTGTCCTGGCTGC...CTCATAGACGGCAGGTGCCCACCTTTCAGGGAGTCTCCCAGCATGGGCGGATGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR GCA 90 bp GACACTGACGCCACACTGAGCAGGATGCACGGCCCGGGGCTCACACTGTCCATGCAGAGTTCCCAGTGGTaGCGCCCAGACCTACTGTCC +
Preference number: 4 (lower is better)
Translates to: DTDATLSRMHGPGLTLSMQSSQW*RPDLLS
Trigger: GGACAGTAGGTCTGGGCGGCACCACTGGGAACTCTG...CATGGACAGTGTGAGCCCCGGGCCGTGCATCCTGCTCAGTGTGGCGTCAGTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR GCA 90 bp CAGCCAGGACAGCCTGCACCGCCTCCCAGACTCTTGCAGGAAGGGGAGCTCTGCGTTTACAGCAGCTCATaGCCGGCATCCGCCCATGCT +
Preference number: 4 (lower is better)
Translates to: QPGQPAPPPRLLQEGELCVYSSS*PASAHA
Trigger: AGCATGGGCGGATGCCGGGCATGAGCTGCTGTAAAC...GCAGAGCTCCCCTTCCTGCAAGAGTCTGGGAGGCGGTGCAGGCTGTCCTGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR GCA 90 bp GAGCAGGGCCCAGGTCCAGACAGCCCTCTGGCCAGATGTGACTGGAAGAGGCTGTCACTCGAGGTTATGTaGCCAGGCCTCACCTGGCCG +
Preference number: 4 (lower is better)
Translates to: EQGPGPDSPLARCDWKRLSLEVM*PGLTWP
Trigger: CGGCCAGGTGAGGCCTGGGCACATAACCTCGAGTGA...CAGCCTCTTCCAGTCACATCTGGCCAGAGGGCTGTCTGGACCTGGGCCCTGCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376652.9
CDS-3UTR GCA 90 bp ACTGAGCAGGATGCACGGCCCGGGGCTCACACTGTCCATGGAGGAGGTGGGGTCGGATGTGGGCTGGTCTaGAGTTTCCCTGGCATGCGA +
Preference number: 4 (lower is better)
Translates to: TEQDARPGAHTVHGGGGVGCGLV*SFPGMR
Trigger: TCGCATGCCAGGGAAACTGCAGACCAGCCCACATCC...GACCCCACCTCCTCCATGGACAGTGTGAGCCCCGGGCCGTGCATCCTGCTCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376652.9
CDS-3UTR GCA 90 bp ACTGAGCAGGATGCACGGCCCGGGGCTCACACTGTCCATGGAGGAGGTGGGGTCTCCAAACACGGGGACTaGAGGACTGAGGCAGCTCAG +
Preference number: 4 (lower is better)
Translates to: TEQDARPGAHTVHGGGGVSKHGD*RTEAAQ
Trigger: CTGAGCTGCCTCAGTCCTGCAGTCCCCGTGTTTGGA...GACCCCACCTCCTCCATGGACAGTGTGAGCCCCGGGCCGTGCATCCTGCTCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000376652.9
CDS-3UTR CCA 90 bp GTGCCGCCCAGACCTACTGTCCCGGGGGTGTTATGGCTGTCCCTCGGCTTCCCCCACGCTGCTCCCTCCTaGAGTTTTCAAGCTGCCTGT +
Preference number: 4 (lower is better)
Translates to: VPPRPTVPGVLWLSLGFPHAAPS*SFQAAC
Trigger: ACAGGCAGCTTGAAAACTCCAGGAGGGAGCAGCGTG...GGGGAAGCCGAGGGACAGCCATAACACCCCCGGGACAGTAGGTCTGGGCGGCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CCA 90 bp CCGGGGGTGTTATGGCTGTCCCTCGGCTTCCCCAGAGCAGCCAGGACAGCCTGCTCCGACACACGTACTTaGCTGCGATCTCGAAGTCCC +
Preference number: 4 (lower is better)
Translates to: PGVLWLSLGFPRAARTACSDTRT*LRSRSP
Trigger: GGGACTTCGAGATCGCAGCCAAGTACGTGTGTCGGA...GCAGGCTGTCCTGGCTGCTCTGGGGAAGCCGAGGGACAGCCATAACACCCCCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
CDS-3UTR CCA 90 bp AGCCCCGACACTGACGCCACACTGAGCAGGATGCACGGCCCGGGGCTCACACTGGTCCAGACAGCCCTCTaGCCAGATGTGACTGGAAGA +
Preference number: 4 (lower is better)
Translates to: SPDTDATLSRMHGPGLTLVQTAL*PDVTGR
Trigger: TCTTCCAGTCACATCTGGCCAGAGGGCTGTCTGGAC...CAGTGTGAGCCCCGGGCCGTGCATCCTGCTCAGTGTGGCGTCAGTGTCGGGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CCA 90 bp GTGCCGGGCACTGTACATTCACTGAAGCAGCTCAAGGGGCTCAGCCCCGACACTGAGGTGGGCGGATGGTaGCCCGAGACACCGAGAGCT +
Preference number: 4 (lower is better)
Translates to: VPGTVHSLKQLKGLSPDTEVGGW*PETPRA
Trigger: AGCTCTCGGTGTCTCGGGCCACCATCCGCCCACCTC...AGTGTCGGGGCTGAGCCCCTTGAGCTGCTTCAGTGAATGTACAGTGCCCGGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CCA 90 bp GTGCCGCCCAGACCTACTGTCCCGGGGGTGTTATGGCTGTCCCTCGGCTTCCCCGGTCTGCAGTTTCCCTaGCATGCGACACCTTTGGGA +
Preference number: 4 (lower is better)
Translates to: VPPRPTVPGVLWLSLGFPGLQFP*HATPLG
Trigger: TCCCAAAGGTGTCGCATGCCAGGGAAACTGCAGACC...GGGGAAGCCGAGGGACAGCCATAACACCCCCGGGACAGTAGGTCTGGGCGGCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376652.9
CDS-3UTR TCA 90 bp ACACTGAGCAGGATGCACGGCCCGGGGCTCACACTGTCCATGGAGGAGGTGGGGCGCTGCTTTCTGCCCTaGAACCCTGTACGTGACTTC +
Preference number: 4 (lower is better)
Translates to: TLSRMHGPGLTLSMEEVGRCFLP*NPVRDF
Trigger: GAAGTCACGTACAGGGTTTCAGGGCAGAAAGCAGCG...CCCCACCTCCTCCATGGACAGTGTGAGCCCCGGGCCGTGCATCCTGCTCAGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
CDS-3UTR TCA 90 bp GGTGGCATTGAGCAGGGCCCAGGTCCAGACAGCCCTCTGGCCAGATGTGACTGGCCTTCTCCGCATCTATaGGGCCCACACCAGCTGCAA +
Preference number: 4 (lower is better)
Translates to: GGIEQGPGPDSPLARCDWPSPHL*GPHQLQ
Trigger: TTGCAGCTGGTGTGGGCCTCATAGATGCGGAGAAGG...CCAGTCACATCTGGCCAGAGGGCTGTCTGGACCTGGGCCCTGCTCAATGCCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR TCA 90 bp GCATTGAGCAGGGCCCAGGTCCAGACAGCCCTCTGGCCAGATGTGACTGGAAGAGGTGAGGTCCATGCATaGGAAGGGGCTGCTCTGCGG +
Preference number: 4 (lower is better)
Translates to: ALSRAQVQTALWPDVTGRGEVHA*EGAALR
Trigger: CCGCAGAGCAGCCCCTTCTCATGCATGGACCTCACC...TCTTCCAGTCACATCTGGCCAGAGGGCTGTCTGGACCTGGGCCCTGCTCAATGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR TCA 90 bp CTGTGCAGGCCTCCACCACGTGGCTCCATCAGCATTCGCTGCAGCCCTGGGAGGATGGCTCGGCCACTATaGGGCTGGACTCTTCTGTCT +
Preference number: 4 (lower is better)
Translates to: LCRPPPRGSISIRCSPGRMARPL*GWTLLS
Trigger: AGACAGAAGAGTCCAGCCTCATAGTGGCCGAGCCAT...CCTCCCAGGGCTGCAGCGAATGCTGATGGAGCCACGTGGTGGAGGCCTGCACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376652.9
CDS-3UTR TCA 90 bp GCATCCGCCCATGCTGGGAGACTCCCTGAAAGGTGGGCACCTGCCGTCTATGAGACACACAGACACTGCTaGCGGGGACAGGGATGGCTC +
Preference number: 4 (lower is better)
Translates to: ASAHAGRLPERWAPAVYETHRHC*RGQGWL
Trigger: GAGCCATCCCTGTCCCCGTCAGCAGTGTCTGTGTGT...CTCATAGACGGCAGGTGCCCACCTTTCAGGGAGTCTCCCAGCATGGGCGGATGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR TCA 90 bp GCTCGTGCCGGGCACTGTACATTCACTGAAGCAGCTCAAGGGGCTCAGCCCCGAACACACAGACACTGCTaGCGGGGACAGGGATGGCTC +
Preference number: 4 (lower is better)
Translates to: ARAGHCTFTEAAQGAQPRTHRHC*RGQGWL
Trigger: GAGCCATCCCTGTCCCCGTCAGCAGTGTCTGTGTGT...TCGGGGCTGAGCCCCTTGAGCTGCTTCAGTGAATGTACAGTGCCCGGCACGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR TCA 90 bp GCATTGAGCAGGGCCCAGGTCCAGACAGCCCTCTGGCCAGATGTGACTGGAAGAGTGACTGGAAGAGGCTaGTGCCAGGGCAGCACCAGG +
Preference number: 4 (lower is better)
Translates to: ALSRAQVQTALWPDVTGRVTGRG*CQGSTR
Trigger: CCTGGTGCTGCCCTGGCATCAGCCTCTTCCAGTCAC...TCTTCCAGTCACATCTGGCCAGAGGGCTGTCTGGACCTGGGCCCTGCTCAATGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR TCA 90 bp GCATTGAGCAGGGCCCAGGTCCAGACAGCCCTCTGGCCAGATGTGACTGGAAGATGCTGGGAGACTCCCTaGAAGGTGGGCACCTGCCGT +
Preference number: 4 (lower is better)
Translates to: ALSRAQVQTALWPDVTGRCWETP*KVGTCR
Trigger: ACGGCAGGTGCCCACCTTTCAGGGAGTCTCCCAGCA...TCTTCCAGTCACATCTGGCCAGAGGGCTGTCTGGACCTGGGCCCTGCTCAATGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR TCA 90 bp TCAAGTCCAGAGTTCCCAGTGGTGCCGCCCAGACCTACTGTCCCGGGGGTGTTAGCTCAGCCCCGACACTaGCGCCACACTGAGCAGGAT +
Preference number: 4 (lower is better)
Translates to: SSPEFPVVPPRPTVPGVLAQPRH*RHTEQD
Trigger: ATCCTGCTCAGTGTGGCGTCAGTGTCGGGGCTGAGC...TAACACCCCCGGGACAGTAGGTCTGGGCGGCACCACTGGGAACTCTGGACTTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR TCA 90 bp CCACTGCTGTGTCCTCGAGAGGGATGTCGACAGGACTGGAAATACGCCACCCCCGCTCAGCCCCGACACTaGCGCCACACTGAGCAGGAT +
Preference number: 4 (lower is better)
Translates to: PLLCPREGCRQDWKYATPAQPRH*RHTEQD
Trigger: ATCCTGCTCAGTGTGGCGTCAGTGTCGGGGCTGAGC...GGGGGTGGCGTATTTCCAGTCCTGTCGACATCCCTCTCGAGGACACAGCAGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376652.9
CDS-3UTR TCA 90 bp ACTCAAGTCCAGAGTTCCCAGTGGTGCCGCCCAGACCTACTGTCCCGGGGGTGTCCGACACACTGGGGATaGGACACGTCCCTTCACGCT +
Preference number: 4 (lower is better)
Translates to: TQVQSSQWCRPDLLSRGCPTHWG*DTSLHA
Trigger: AGCGTGAAGGGACGTGTCTCATCCCCAGTGTGTCGG...ACACCCCCGGGACAGTAGGTCTGGGCGGCACCACTGGGAACTCTGGACTTGAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376666.3
ENST00000433259.6
CDS-3UTR GCA 90 bp GGTGGCATTGAGCAGGGCCCAGGTCCAGACAGCCCTCTGGCCAGATGTGACTGGCCAGCATGCCCACGCTaGTCCCTCCTGGAGTTTTCA +
Preference number: 4 (lower is better)
Translates to: GGIEQGPGPDSPLARCDWPACPR*SLLEFS
Trigger: TGAAAACTCCAGGAGGGAGCAGCGTGGGCATGCTGG...CCAGTCACATCTGGCCAGAGGGCTGTCTGGACCTGGGCCCTGCTCAATGCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR GCA 90 bp GATCTCAGGTGCCAGGTGGGCAAATGCTACTGTCGCTCAACGAGAGGAATCCCAGGGAGGCCTGCAGGGTaGCCTCCACGCGTGGCAGGA +
Preference number: 4 (lower is better)
Translates to: DLRCQVGKCYCRSTRGIPGRPAG*PPRVAG
Trigger: TCCTGCCACGCGTGGAGGGCACCCTGCAGGCCTCCC...TGGGATTCCTCTCGTTGAGCGACAGTAGCATTTGCCCACCTGGCACCTGAGATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376652.9
CDS-3UTR GCA 90 bp CGTCACTCAAGCAGCACAGCCACAAATAGTTTACAGCAGCTCATGCCCGGCATCCCGGGTGGGGAGGCCTaGAGGGTGCCCTCCACGCGT +
Preference number: 4 (lower is better)
Translates to: RHSSSTATNSLQQLMPGIPGGEA*RVPSTR
Trigger: ACGCGTGGAGGGCACCCTGCAGGCCTCCCCACCCGG...GATGCCGGGCATGAGCTGCTGTAAACTATTTGTGGCTGTGCTGCTTGAGTGACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR GCA 90 bp GAGCAGGGCCCAGGTCCAGACAGCCCTCTGGCCAGATGTGACTGGAAGAGGCTGGTTAAACATCCGCAGTaGCGTCAGGTAGCCGGGTGG +
Preference number: 4 (lower is better)
Translates to: EQGPGPDSPLARCDWKRLVKHPQ*RQVAGW
Trigger: CCACCCGGCTACCTGACGGCACTGCGGATGTTTAAC...CAGCCTCTTCCAGTCACATCTGGCCAGAGGGCTGTCTGGACCTGGGCCCTGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR GCA 90 bp GCTCGTGCCGGGCACTGTACATTCACTGAAGCAGCTCAAGGGGCTCAGCCCCGAGTTCTGTCCTGGTCCTaGCCACTTGGAGCCCAGGCA +
Preference number: 4 (lower is better)
Translates to: ARAGHCTFTEAAQGAQPRVLSWS*PLGAQA
Trigger: TGCCTGGGCTCCAAGTGGGCAGGACCAGGACAGAAC...TCGGGGCTGAGCCCCTTGAGCTGCTTCAGTGAATGTACAGTGCCCGGCACGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR GCA 90 bp ACTCAAGTCCAGAGTTCCCAGTGGTGCCGCCCAGACCTACTGTCCCGGGGGTGTCCCACCGTACTTGGCTaGGATCTCGAAGTCCCCCAC +
Preference number: 4 (lower is better)
Translates to: TQVQSSQWCRPDLLSRGCPTVLG*DLEVPH
Trigger: GTGGGGGACTTCGAGATCGCAGCCAAGTACGGTGGG...ACACCCCCGGGACAGTAGGTCTGGGCGGCACCACTGGGAACTCTGGACTTGAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CCA 90 bp GAGCAGGGCCCAGGTCCAGACAGCCCTCTGGCCAGATGTGACTGGAAGAGGCTGCCTAAGACATGGCCCTaGCTAGGCGGGAACAGCTCA +
Preference number: 4 (lower is better)
Translates to: EQGPGPDSPLARCDWKRLPKTWP*LGGNSS
Trigger: TGAGCTGTTCCCGCCTAGCCAGGGCCATGTCTTAGG...CAGCCTCTTCCAGTCACATCTGGCCAGAGGGCTGTCTGGACCTGGGCCCTGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CCA 90 bp CCGGGGGTGTTATGGCTGTCCCTCGGCTTCCCCAGAGCAGCCAGGACAGCCTGCGGATGTCGACAGGACTaGAAATACGCCACCCCCTTT +
Preference number: 4 (lower is better)
Translates to: PGVLWLSLGFPRAARTACGCRQD*KYATPF
Trigger: AAAGGGGGTGGCGTATTTCCAGTCCTGTCGACATCC...GCAGGCTGTCCTGGCTGCTCTGGGGAAGCCGAGGGACAGCCATAACACCCCCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000376652.9
CDS-3UTR CCA 90 bp GGTACGCGGGCTGGGGTGGCATGTGGGGCGTGTGAGACCTGTCTGAGCTTGTCACAAGCACTCGGGATGTaGGCTGGTCTGCAGTTTCCC +
Preference number: 4 (lower is better)
Translates to: GTRAGVACGACETCLSLSQALGM*AGLQFP
Trigger: GGGAAACTGCAGACCAGCCCACATCCCGAGTGCTTG...TGACAAGCTCAGACAGGTCTCACACGCCCCACATGCCACCCCAGCCCGCGTACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376652.9
CDS-3UTR TCA 90 bp CGCCCAGACCTACTGTCCCGGGGGTGTTATGGCTGTCCCTCGGCTTCCCCAGAGTGTAGGCAACATAGATaGACACGCCCACACACAGCC +
Preference number: 4 (lower is better)
Translates to: RPDLLSRGCYGCPSASPECRQHR*TRPHTA
Trigger: GGCTGTGTGTGGGCGTGTTCATCTATGTTGCCTACA...CTCTGGGGAAGCCGAGGGACAGCCATAACACCCCCGGGACAGTAGGTCTGGGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000433259.6
CDS-3UTR TCA 90 bp CCCAGTGGTGCCGCCCAGACCTACTGTCCCGGGGGTGTTATGGCTGTCCCTCGGGTTCCCACTCTCCTTTaGAACTGGGAGACAAGCAAG +
Preference number: 4 (lower is better)
Translates to: PSGAAQTYCPGGVMAVPRVPTLL*NWETSK
Trigger: CTTGCTTGTCTCCCAGTTTCAAAGGAGAGTGGGAAC...CCGAGGGACAGCCATAACACCCCCGGGACAGTAGGTCTGGGCGGCACCACTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
CDS-3UTR TCA 90 bp GTGCCGCCCAGACCTACTGTCCCGGGGGTGTTATGGCTGTCCCTCGGCTTCCCCGTTCCCACTCTCCTTTaGAACTGGGAGACAAGCAAG +
Preference number: 4 (lower is better)
Translates to: VPPRPTVPGVLWLSLGFPVPTLL*NWETSK
Trigger: CTTGCTTGTCTCCCAGTTTCAAAGGAGAGTGGGAAC...GGGGAAGCCGAGGGACAGCCATAACACCCCCGGGACAGTAGGTCTGGGCGGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
CDS-3UTR TCA 90 bp GACACTGACGCCACACTGAGCAGGATGCACGGCCCGGGGCTCACACTGTCCATGCGCTGCTTTCTGCCCTaGAACCCTGTACGTGACTTC +
Preference number: 4 (lower is better)
Translates to: DTDATLSRMHGPGLTLSMRCFLP*NPVRDF
Trigger: GAAGTCACGTACAGGGTTTCAGGGCAGAAAGCAGCG...CATGGACAGTGTGAGCCCCGGGCCGTGCATCCTGCTCAGTGTGGCGTCAGTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
CDS-3UTR TCA 90 bp GCATTGAGCAGGGCCCAGGTCCAGACAGCCCTCTGGCCAGATGTGACTGGAAGAACACACAGACACTGCTaGCGGGGACAGGGATGGCTC +
Preference number: 4 (lower is better)
Translates to: ALSRAQVQTALWPDVTGRTHRHC*RGQGWL
Trigger: GAGCCATCCCTGTCCCCGTCAGCAGTGTCTGTGTGT...TCTTCCAGTCACATCTGGCCAGAGGGCTGTCTGGACCTGGGCCCTGCTCAATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR TCA 90 bp TCTGGGACTGTGGCTCAGCTGACCCGTGGCACAGCTGCACCTAAGACATGGCCCTGTGGCTCCTCAGGATaGAGTCACGTCCAGGACAGG +
Preference number: 4 (lower is better)
Translates to: SGTVAQLTRGTAAPKTWPCGSSG*SHVQDR
Trigger: CCTGTCCTGGACGTGACTTCATCCTGAGGAGCCACA...GGGCCATGTCTTAGGTGCAGCTGTGCCACGGGTCAGCTGAGCCACAGTCCCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR TCA 90 bp TTCAGGCACAAGCACTCGGGATGTGGGCTGGTCTGCAGTTTCCCTGGCATGCGAGTGACTGGAAGAGGCTaGTGCCAGGGCAGCACCAGG +
Preference number: 4 (lower is better)
Translates to: FRHKHSGCGLVCSFPGMRVTGRG*CQGSTR
Trigger: CCTGGTGCTGCCCTGGCATCAGCCTCTTCCAGTCAC...TCGCATGCCAGGGAAACTGCAGACCAGCCCACATCCCGAGTGCTTGTGCCTGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376652.9
CDS-3UTR TCA 90 bp CCACTGCTGTGTCCTCGAGAGGGATGTCGACAGGACTGGAAATACGCCACCCCCCCCTCTGGCCAGATGTaGCTGGAAGAGGCTGATGCC +
Preference number: 4 (lower is better)
Translates to: PLLCPREGCRQDWKYATPPSGQM*LEEADA
Trigger: GGCATCAGCCTCTTCCAGTCACATCTGGCCAGAGGG...GGGGGTGGCGTATTTCCAGTCCTGTCGACATCCCTCTCGAGGACACAGCAGTGG
61% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376652.9
CDS-3UTR TCA 90 bp TCAAGTCCAGAGTTCCCAGTGGTGCCGCCCAGACCTACTGTCCCGGGGGTGTTACCCTGGGGAGGAAACTaGCAGGCTGGGAGACAAGAC +
Preference number: 4 (lower is better)
Translates to: SSPEFPVVPPRPTVPGVLPWGGN*QAGRQD
Trigger: GTCTTGTCTCCCAGCCTGTCAGTTTCCTCCCCAGGG...TAACACCCCCGGGACAGTAGGTCTGGGCGGCACCACTGGGAACTCTGGACTTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR TCA 90 bp CGTCCAGGACAGGAGGGTTTATGCAGACACACAGACACTGCTGACGGGGACAGGGCTCAGCCCCGACACTaGCGCCACACTGAGCAGGAT +
Preference number: 4 (lower is better)
Translates to: RPGQEGLCRHTDTADGDRAQPRH*RHTEQD
Trigger: ATCCTGCTCAGTGTGGCGTCAGTGTCGGGGCTGAGC...CCTGTCCCCGTCAGCAGTGTCTGTGTGTCTGCATAAACCCTCCTGTCCTGGACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR TCA 90 bp GTGCCGCCCAGACCTACTGTCCCGGGGGTGTTATGGCTGTCCCTCGGCTTCCCCTTACCTTCATGCGTCTaGTTCTCAGCCTCCGGAGTT +
Preference number: 4 (lower is better)
Translates to: VPPRPTVPGVLWLSLGFPLPSCV*FSASGV
Trigger: AACTCCGGAGGCTGAGAATCAGACGCATGAAGGTAA...GGGGAAGCCGAGGGACAGCCATAACACCCCCGGGACAGTAGGTCTGGGCGGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376652.9
CDS-3UTR TCA 90 bp CCACTGCTGTGTCCTCGAGAGGGATGTCGACAGGACTGGAAATACGCCACCCCCGCAATGGGTGCTAAGTaGTGTGGGGTACGCGGGCTG +
Preference number: 4 (lower is better)
Translates to: PLLCPREGCRQDWKYATPAMGAK*CGVRGL
Trigger: CAGCCCGCGTACCCCACATCACTTAGCACCCATTGC...GGGGGTGGCGTATTTCCAGTCCTGTCGACATCCCTCTCGAGGACACAGCAGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376652.9
CDS-3UTR GCA 90 bp TCATGCCCGGCATCCGCCCATGCTGGGAGACTCCCTGAAAGGTGGGCACCTGCCAGACGTGTACTCGGGTaGCAGTGCTTCCTGCATCAA +
Preference number: 4 (lower is better)
Translates to: SCPASAHAGRLPERWAPARRVLG*QCFLHQ
Trigger: TTGATGCAGGAAGCACTGGCACCCGAGTACACGTCT...GGCAGGTGCCCACCTTTCAGGGAGTCTCCCAGCATGGGCGGATGCCGGGCATGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000433259.6
CDS-3UTR GCA 90 bp CTACACAAGCACTTGGCACCCACACGACAGAGACGTCACTCAAGCAGCACAGCCCGCCCAAGTCCAGCATaGCCACGCTGCTCCCTCCTG +
Preference number: 4 (lower is better)
Translates to: LHKHLAPTRQRRHSSSTARPSPA*PRCSLL
Trigger: CAGGAGGGAGCAGCGTGGGCATGCTGGACTTGGGCG...GGCTGTGCTGCTTGAGTGACGTCTCTGTCGTGTGGGTGCCAAGTGCTTGTGTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR GCA 90 bp GTTTCTACACAAGCACTTGGCACCCACACGACAGAGACGTCACTCAAGCAGCACGGGAGGCCTGCAGGGTaGCCTCCACGCGTGGCAGGA +
Preference number: 4 (lower is better)
Translates to: VSTQALGTHTTETSLKQHGRPAG*PPRVAG
Trigger: TCCTGCCACGCGTGGAGGGCACCCTGCAGGCCTCCC...GTGCTGCTTGAGTGACGTCTCTGTCGTGTGGGTGCCAAGTGCTTGTGTAGAAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR GCA 90 bp GCATCCGCCCATGCTGGGAGACTCCCTGAAAGGTGGGCACCTGCCGTCTATGAGGTTAAACATCCGCAGTaGCGTCAGGTAGCCGGGTGG +
Preference number: 4 (lower is better)
Translates to: ASAHAGRLPERWAPAVYEVKHPQ*RQVAGW
Trigger: CCACCCGGCTACCTGACGGCACTGCGGATGTTTAAC...CTCATAGACGGCAGGTGCCCACCTTTCAGGGAGTCTCCCAGCATGGGCGGATGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR GCA 90 bp CCTGCTCTGTGCAGGCCTCCACCACGTGGCTCCATCAGCATTCGCTGCAGCCCTCTTGCCGCTGCTTTCTaGCCTGAAACCCTGTACGTG +
Preference number: 4 (lower is better)
Translates to: PALCRPPPRGSISIRCSPLAAAF*PETLYV
Trigger: CACGTACAGGGTTTCAGGGCAGAAAGCAGCGGCAAG...AGGGCTGCAGCGAATGCTGATGGAGCCACGTGGTGGAGGCCTGCACAGAGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376652.9
CDS-3UTR GCA 90 bp GTGCCGGGCACTGTACATTCACTGAAGCAGCTCAAGGGGCTCAGCCCCGACACTGCAGCACACAGCTCGTaGAGGCTTGCCGCTGCTTTC +
Preference number: 4 (lower is better)
Translates to: VPGTVHSLKQLKGLSPDTAAHSS*RLAAAF
Trigger: GAAAGCAGCGGCAAGCCTGCACGAGCTGTGTGCTGC...AGTGTCGGGGCTGAGCCCCTTGAGCTGCTTCAGTGAATGTACAGTGCCCGGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
CDS-3UTR GCA 90 bp CACTCAAGTCCAGAGTTCCCAGTGGTGCCGCCCAGACCTACTGTCCCGGGGGTGACACACGTACTTGGCTaGGATCTCGAAGTCCCCCAC +
Preference number: 4 (lower is better)
Translates to: HSSPEFPVVPPRPTVPGVTHVLG*DLEVPH
Trigger: GTGGGGGACTTCGAGATCGCAGCCAAGTACGTGTGT...CACCCCCGGGACAGTAGGTCTGGGCGGCACCACTGGGAACTCTGGACTTGAGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
CDS-3UTR GCA 90 bp TCAAGTCCAGAGTTCCCAGTGGTGCCGCCCAGACCTACTGTCCCGGGGGTGTTAGTTCTGTCCTGGTCCTaGCCACTTGGAGCCCAGGCA +
Preference number: 4 (lower is better)
Translates to: SSPEFPVVPPRPTVPGVLVLSWS*PLGAQA
Trigger: TGCCTGGGCTCCAAGTGGGCAGGACCAGGACAGAAC...TAACACCCCCGGGACAGTAGGTCTGGGCGGCACCACTGGGAACTCTGGACTTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR GCA 90 bp ACTCAAGTCCAGAGTTCCCAGTGGTGCCGCCCAGACCTACTGTCCCGGGGGTGTTGCCCCCTCAGTGTGTaGCTGTGGTTCTGTCCTGGT +
Preference number: 4 (lower is better)
Translates to: TQVQSSQWCRPDLLSRGCCPLSV*LWFCPG
Trigger: ACCAGGACAGAACCACAGGCACACACTGAGGGGGCA...ACACCCCCGGGACAGTAGGTCTGGGCGGCACCACTGGGAACTCTGGACTTGAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR GCA 90 bp GCATTGAGCAGGGCCCAGGTCCAGACAGCCCTCTGGCCAGATGTGACTGGAAGACAGAGTTCCCAGTGGTaGCGCCCAGACCTACTGTCC +
Preference number: 4 (lower is better)
Translates to: ALSRAQVQTALWPDVTGRQSSQW*RPDLLS
Trigger: GGACAGTAGGTCTGGGCGGCACCACTGGGAACTCTG...TCTTCCAGTCACATCTGGCCAGAGGGCTGTCTGGACCTGGGCCCTGCTCAATGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR GCA 90 bp GCTCGTGCCGGGCACTGTACATTCACTGAAGCAGCTCAAGGGGCTCAGCCCCGAGTTTACAGCAGCTCATaGCCGGCATCCGCCCATGCT +
Preference number: 4 (lower is better)
Translates to: ARAGHCTFTEAAQGAQPRVYSSS*PASAHA
Trigger: AGCATGGGCGGATGCCGGGCATGAGCTGCTGTAAAC...TCGGGGCTGAGCCCCTTGAGCTGCTTCAGTGAATGTACAGTGCCCGGCACGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR GCA 90 bp CGTCCAGGACAGGAGGGTTTATGCAGACACACAGACACTGCTGACGGGGACAGGCCAGGGGCCCTCCACTaGTGTGTCCTCGAGAGGGAT +
Preference number: 4 (lower is better)
Translates to: RPGQEGLCRHTDTADGDRPGALH*CVLERD
Trigger: ATCCCTCTCGAGGACACAGCAGTGGAGGGCCCCTGG...CCTGTCCCCGTCAGCAGTGTCTGTGTGTCTGCATAAACCCTCCTGTCCTGGACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376652.9
CDS-3UTR GCA 90 bp CTACACAAGCACTTGGCACCCACACGACAGAGACGTCACTCAAGCAGCACAGCCGCAGCACACAGCTCGTaGAGGCTTGCCGCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: LHKHLAPTRQRRHSSSTAAAHSS*RLAAGC
Trigger: GCAGCCTGCGGCAAGCCTGCACGAGCTGTGTGCTGC...GGCTGTGCTGCTTGAGTGACGTCTCTGTCGTGTGGGTGCCAAGTGCTTGTGTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433259.6
CDS-3UTR CCA 90 bp GCTCGTGCCGGGCACTGTACATTCACTGAAGCAGCTCAAGGGGCTCAGCCCCGAGGAAGGCGATCTGAGTaGATCCTCCGCCCAAGTCCA +
Preference number: 4 (lower is better)
Translates to: ARAGHCTFTEAAQGAQPRGRRSE*ILRPSP
Trigger: TGGACTTGGGCGGAGGATCCACTCAGATCGCCTTCC...TCGGGGCTGAGCCCCTTGAGCTGCTTCAGTGAATGTACAGTGCCCGGCACGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CCA 90 bp TCTGGGACTGTGGCTCAGCTGACCCGTGGCACAGCTGCACCTAAGACATGGCCCGGACCTCTGACACTCTaGCAGCACACAGCTCGTGCA +
Preference number: 4 (lower is better)
Translates to: SGTVAQLTRGTAAPKTWPGPLTL*QHTARA
Trigger: TGCACGAGCTGTGTGCTGCCAGAGTGTCAGAGGTCC...GGGCCATGTCTTAGGTGCAGCTGTGCCACGGGTCAGCTGAGCCACAGTCCCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CCA 90 bp GACACTGACGCCACACTGAGCAGGATGCACGGCCCGGGGCTCACACTGTCCATGTCCGACACACGTACTTaGCTGCGATCTCGAAGTCCC +
Preference number: 4 (lower is better)
Translates to: DTDATLSRMHGPGLTLSMSDTRT*LRSRSP
Trigger: GGGACTTCGAGATCGCAGCCAAGTACGTGTGTCGGA...CATGGACAGTGTGAGCCCCGGGCCGTGCATCCTGCTCAGTGTGGCGTCAGTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
CDS-3UTR CCA 90 bp TCATGCCCGGCATCCGCCCATGCTGGGAGACTCCCTGAAAGGTGGGCACCTGCCTCAGCACTTTGCTCCTaGGAAAGCCGAACTCCTGGA +
Preference number: 4 (lower is better)
Translates to: SCPASAHAGRLPERWAPASALCS*ESRTPG
Trigger: TCCAGGAGTTCGGCTTTCCCAGGAGCAAAGTGCTGA...GGCAGGTGCCCACCTTTCAGGGAGTCTCCCAGCATGGGCGGATGCCGGGCATGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CCA 90 bp CGCCCAGACCTACTGTCCCGGGGGTGTTATGGCTGTCCCTCGGCTTCCCCAGAGTCAGCACTTTGCTCCTaGGAAAGCCGAACTCCTGGA +
Preference number: 4 (lower is better)
Translates to: RPDLLSRGCYGCPSASPESALCS*ESRTPG
Trigger: TCCAGGAGTTCGGCTTTCCCAGGAGCAAAGTGCTGA...CTCTGGGGAAGCCGAGGGACAGCCATAACACCCCCGGGACAGTAGGTCTGGGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CCA 90 bp CCGGGGGTGTTATGGCTGTCCCTCGGCTTCCCCAGAGCAGCCAGGACAGCCTGCAGGAGAGCAGGCCTCTaGGTGAACTCACACATTCAT +
Preference number: 4 (lower is better)
Translates to: PGVLWLSLGFPRAARTACRRAGL*VNSHIH
Trigger: ATGAATGTGTGAGTTCACCCAGAGGCCTGCTCTCCT...GCAGGCTGTCCTGGCTGCTCTGGGGAAGCCGAGGGACAGCCATAACACCCCCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CCA 90 bp GACACTGACGCCACACTGAGCAGGATGCACGGCCCGGGGCTCACACTGTCCATGAGACTCCCTGAAAGGTaGGCACCTGCCGTCTATGAG +
Preference number: 4 (lower is better)
Translates to: DTDATLSRMHGPGLTLSMRLPER*APAVYE
Trigger: CTCATAGACGGCAGGTGCCCACCTTTCAGGGAGTCT...CATGGACAGTGTGAGCCCCGGGCCGTGCATCCTGCTCAGTGTGGCGTCAGTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CCA 90 bp CCCAGTGGTGCCGCCCAGACCTACTGTCCCGGGGGTGTTATGGCTGTCCCTCGGTTCACAGGACACAGTTaGTGTCCAGAAAAGGGGGCT +
Preference number: 4 (lower is better)
Translates to: PSGAAQTYCPGGVMAVPRFTGHS*CPEKGA
Trigger: AGCCCCCTTTTCTGGACACCAACTGTGTCCTGTGAA...CCGAGGGACAGCCATAACACCCCCGGGACAGTAGGTCTGGGCGGCACCACTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CCA 90 bp GCATTGAGCAGGGCCCAGGTCCAGACAGCCCTCTGGCCAGATGTGACTGGAAGAGCTGCACCTAAGACATaGCCCTGGCTAGGCGGGAAC +
Preference number: 4 (lower is better)
Translates to: ALSRAQVQTALWPDVTGRAAPKT*PWLGGN
Trigger: GTTCCCGCCTAGCCAGGGCCATGTCTTAGGTGCAGC...TCTTCCAGTCACATCTGGCCAGAGGGCTGTCTGGACCTGGGCCCTGCTCAATGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CCA 90 bp GCCCCTGTCAACCTTTTATTGGGAGTGGAACACATGAGGTTCAGCTCGTGCCGGCCCGAGGTGGGCGGATaGTGGCCCGAGACACCGAGA +
Preference number: 4 (lower is better)
Translates to: APVNLLLGVEHMRFSSCRPEVGG*WPETPR
Trigger: TCTCGGTGTCTCGGGCCACCATCCGCCCACCTCGGG...CCGGCACGAGCTGAACCTCATGTGTTCCACTCCCAATAAAAGGTTGACAGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CCA 90 bp TGGCTCCTCAGGATGAAGTCACGTCCAGGACAGGAGGGTTTATGCAGACACACAGGGGTCAGCCCGAGGTaGGCGGATGGTGGCCCGAGA +
Preference number: 4 (lower is better)
Translates to: WLLRMKSRPGQEGLCRHTGVSPR*ADGGPR
Trigger: TCTCGGGCCACCATCCGCCCACCTCGGGCTGACCCC...TGTGTGTCTGCATAAACCCTCCTGTCCTGGACGTGACTTCATCCTGAGGAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CCA 90 bp GTGCTGTGGCTCCTCAGGATGAAGTCACGTCCAGGACAGGAGGGTTTATGCAGAGTGCTCAACAGACGCTaGGAGGGCCGGGGCCACCAG +
Preference number: 4 (lower is better)
Translates to: VLWLLRMKSRPGQEGLCRVLNRR*EGRGHQ
Trigger: CTGGTGGCCCCGGCCCTCCCAGCGTCTGTTGAGCAC...TCTGCATAAACCCTCCTGTCCTGGACGTGACTTCATCCTGAGGAGCCACAGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376652.9
CDS-3UTR CCA 90 bp GCATCCGCCCATGCTGGGAGACTCCCTGAAAGGTGGGCACCTGCCGTCTATGAGGACTCCCACCGTACTTaGCTGCGATCTCGAAGTCCC +
Preference number: 4 (lower is better)
Translates to: ASAHAGRLPERWAPAVYEDSHRT*LRSRSP
Trigger: GGGACTTCGAGATCGCAGCCAAGTACGGTGGGAGTC...CTCATAGACGGCAGGTGCCCACCTTTCAGGGAGTCTCCCAGCATGGGCGGATGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CCA 90 bp GCTCGTGCCGGGCACTGTACATTCACTGAAGCAGCTCAAGGGGCTCAGCCCCGAGACTCCCACCGTACTTaGCTGCGATCTCGAAGTCCC +
Preference number: 4 (lower is better)
Translates to: ARAGHCTFTEAAQGAQPRDSHRT*LRSRSP
Trigger: GGGACTTCGAGATCGCAGCCAAGTACGGTGGGAGTC...TCGGGGCTGAGCCCCTTGAGCTGCTTCAGTGAATGTACAGTGCCCGGCACGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376666.3
ENST00000433259.6
CDS-3UTR TCA 90 bp AGGCAAACACACTCAAGTCCAGAGTTCCCAGTGGTGCCGCCCAGACCTACTGTCGGCAGGAAGGCGATCTaGGTGGATCCTCCGCCCAAG +
Preference number: 4 (lower is better)
Translates to: RQTHSSPEFPVVPPRPTVGRKAI*VDPPPK
Trigger: CTTGGGCGGAGGATCCACTCAGATCGCCTTCCTGCC...GACAGTAGGTCTGGGCGGCACCACTGGGAACTCTGGACTTGAGTGTGTTTGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR TCA 90 bp CTACACAAGCACTTGGCACCCACACGACAGAGACGTCACTCAAGCAGCACAGCCGGCAGGAAGGCGATCTaGGTGGATCCTCCGCCCAAG +
Preference number: 4 (lower is better)
Translates to: LHKHLAPTRQRRHSSSTAGRKAI*VDPPPK
Trigger: CTTGGGCGGAGGATCCACTCAGATCGCCTTCCTGCC...GGCTGTGCTGCTTGAGTGACGTCTCTGTCGTGTGGGTGCCAAGTGCTTGTGTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR TCA 90 bp GAGCAGGGCCCAGGTCCAGACAGCCCTCTGGCCAGATGTGACTGGAAGAGGCTGGTTTTGAAGGACCTCTaGCACTCTGGCAGCACACAG +
Preference number: 4 (lower is better)
Translates to: EQGPGPDSPLARCDWKRLVLKDL*HSGSTQ
Trigger: CTGTGTGCTGCCAGAGTGTCAGAGGTCCTTCAAAAC...CAGCCTCTTCCAGTCACATCTGGCCAGAGGGCTGTCTGGACCTGGGCCCTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR TCA 90 bp TGCCCTGAAACTCACTGCCCTGGGATCCTGCCATCCAAACACGGGGACTGCAGGCCTTCTCCGCATCTATaGGGCCCACACCAGCTGCAA +
Preference number: 4 (lower is better)
Translates to: CPETHCPGILPSKHGDCRPSPHL*GPHQLQ
Trigger: TTGCAGCTGGTGTGGGCCTCATAGATGCGGAGAAGG...CCTGCAGTCCCCGTGTTTGGATGGCAGGATCCCAGGGCAGTGAGTTTCAGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376652.9
CDS-3UTR TCA 90 bp AGGCAAACACACTCAAGTCCAGAGTTCCCAGTGGTGCCGCCCAGACCTACTGTCGTGACTGGAAGAGGCTaGTGCCAGGGCAGCACCAGG +
Preference number: 4 (lower is better)
Translates to: RQTHSSPEFPVVPPRPTVVTGRG*CQGSTR
Trigger: CCTGGTGCTGCCCTGGCATCAGCCTCTTCCAGTCAC...GACAGTAGGTCTGGGCGGCACCACTGGGAACTCTGGACTTGAGTGTGTTTGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR TCA 90 bp GTGCAGAAAGTGCCAGCACGGCCTGTGCTGTGGCTCCTCAGGATGAAGTCACGTCCCTGGGGAGGAAACTaGCAGGCTGGGAGACAAGAC +
Preference number: 4 (lower is better)
Translates to: VQKVPARPVLWLLRMKSRPWGGN*QAGRQD
Trigger: GTCTTGTCTCCCAGCCTGTCAGTTTCCTCCCCAGGG...ACGTGACTTCATCCTGAGGAGCCACAGCACAGGCCGTGCTGGCACTTTCTGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR TCA 90 bp AGGCAAACACACTCAAGTCCAGAGTTCCCAGTGGTGCCGCCCAGACCTACTGTCTGCTGGGAGACTCCCTaGAAGGTGGGCACCTGCCGT +
Preference number: 4 (lower is better)
Translates to: RQTHSSPEFPVVPPRPTVCWETP*KVGTCR
Trigger: ACGGCAGGTGCCCACCTTTCAGGGAGTCTCCCAGCA...GACAGTAGGTCTGGGCGGCACCACTGGGAACTCTGGACTTGAGTGTGTTTGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR TCA 90 bp GAGCAGGGCCCAGGTCCAGACAGCCCTCTGGCCAGATGTGACTGGAAGAGGCTGGCACTGTACATTCACTaGAGCAGCTCAAGGGGCTCA +
Preference number: 4 (lower is better)
Translates to: EQGPGPDSPLARCDWKRLALYIH*SSSRGS
Trigger: TGAGCCCCTTGAGCTGCTTCAGTGAATGTACAGTGC...CAGCCTCTTCCAGTCACATCTGGCCAGAGGGCTGTCTGGACCTGGGCCCTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR TCA 90 bp AGCCCCGACACTGACGCCACACTGAGCAGGATGCACGGCCCGGGGCTCACACTGTGCCTTTTTCAGGCATaGGGTCACCGACCTTCTTTA +
Preference number: 4 (lower is better)
Translates to: SPDTDATLSRMHGPGLTLCLFQA*GHRPSL
Trigger: TAAAGAAGGTCGGTGACCTCATGCCTGAAAAAGGCA...CAGTGTGAGCCCCGGGCCGTGCATCCTGCTCAGTGTGGCGTCAGTGTCGGGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000376652.9
CDS-3UTR GCA 90 bp CTACACAAGCACTTGGCACCCACACGACAGAGACGTCACTCAAGCAGCACAGCCACCCACGGAGACGAGTaGCCTTTTCCGGGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: LHKHLAPTRQRRHSSSTATHGDE*PFPGSR
Trigger: CCTGCTCCCCGGAAAAGGGCACTCGTCTCCGTGGGT...GGCTGTGCTGCTTGAGTGACGTCTCTGTCGTGTGGGTGCCAAGTGCTTGTGTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000433259.6
CDS-3UTR GCA 90 bp GACACTGACGCCACACTGAGCAGGATGCACGGCCCGGGGCTCACACTGTCCATGTTTCTCATCCTTGTTTaGCAAGGACCGTGCTGCGGC +
Preference number: 4 (lower is better)
Translates to: DTDATLSRMHGPGLTLSMFLILV*QGPCCG
Trigger: GCCGCAGCACGGTCCTTGGCAAACAAGGATGAGAAA...CATGGACAGTGTGAGCCCCGGGCCGTGCATCCTGCTCAGTGTGGCGTCAGTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000433259.6
CDS-3UTR GCA 90 bp CGTCACTCAAGCAGCACAGCCACAAATAGTTTACAGCAGCTCATGCCCGGCATCCAGCCCCAGGGGGTATaGCACCTTCGCCACCCGCAG +
Preference number: 4 (lower is better)
Translates to: RHSSSTATNSLQQLMPGIQPQGV*HLRHPQ
Trigger: CTGCGGGTGGCGAAGGTGGCATACCCCCTGGGGCTG...GATGCCGGGCATGAGCTGCTGTAAACTATTTGTGGCTGTGCTGCTTGAGTGACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000433259.6
CDS-3UTR GCA 90 bp GTGCCGGGCACTGTACATTCACTGAAGCAGCTCAAGGGGCTCAGCCCCGACACTCCAGCATGCCCACGCTaGTCCCTCCTGGAGTTTTCA +
Preference number: 4 (lower is better)
Translates to: VPGTVHSLKQLKGLSPDTPACPR*SLLEFS
Trigger: TGAAAACTCCAGGAGGGAGCAGCGTGGGCATGCTGG...AGTGTCGGGGCTGAGCCCCTTGAGCTGCTTCAGTGAATGTACAGTGCCCGGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR GCA 90 bp AGGAGAAGCCCCTGTCAACCTTTTATTGGGAGTGGAACACATGAGGTTCAGCTCCCGGGTGGGGAGGCCTaGAGGGTGCCCTCCACGCGT +
Preference number: 4 (lower is better)
Translates to: RRSPCQPFIGSGTHEVQLPGGEA*RVPSTR
Trigger: ACGCGTGGAGGGCACCCTGCAGGCCTCCCCACCCGG...GAGCTGAACCTCATGTGTTCCACTCCCAATAAAAGGTTGACAGGGGCTTCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR GCA 90 bp CGCCCAGACCTACTGTCCCGGGGGTGTTATGGCTGTCCCTCGGCTTCCCCAGAGCCTGTACGTGACTTCTaGGTGTTCCCACTCTCCTTT +
Preference number: 4 (lower is better)
Translates to: RPDLLSRGCYGCPSASPEPVRDF*VFPLSF
Trigger: AAAGGAGAGTGGGAACACGCAGAAGTCACGTACAGG...CTCTGGGGAAGCCGAGGGACAGCCATAACACCCCCGGGACAGTAGGTCTGGGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
CDS-3UTR GCA 90 bp GACACTGACGCCACACTGAGCAGGATGCACGGCCCGGGGCTCACACTGTCCATGGAGGCCCACACCAGCTaGAAGGTCGTAATAGTAGGA +
Preference number: 4 (lower is better)
Translates to: DTDATLSRMHGPGLTLSMEAHTS*KVVIVG
Trigger: TCCTACTATTACGACCTTGCAGCTGGTGTGGGCCTC...CATGGACAGTGTGAGCCCCGGGCCGTGCATCCTGCTCAGTGTGGCGTCAGTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR GCA 90 bp CCAGAGTTCCCAGTGGTGCCGCCCAGACCTACTGTCCCGGGGGTGTTATGGCTGGAGGCCCACACCAGCTaGAAGGTCGTAATAGTAGGA +
Preference number: 4 (lower is better)
Translates to: PEFPVVPPRPTVPGVLWLEAHTS*KVVIVG
Trigger: TCCTACTATTACGACCTTGCAGCTGGTGTGGGCCTC...CAGCCATAACACCCCCGGGACAGTAGGTCTGGGCGGCACCACTGGGAACTCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR GCA 90 bp AGGCAAACACACTCAAGTCCAGAGTTCCCAGTGGTGCCGCCCAGACCTACTGTCGAGAAGGGGCTGCTCTaGGGCTGTGTCTCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: RQTHSSPEFPVVPPRPTVEKGLL*GCVSRV
Trigger: GACCCTGGAGACACAGCCGCAGAGCAGCCCCTTCTC...GACAGTAGGTCTGGGCGGCACCACTGGGAACTCTGGACTTGAGTGTGTTTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR GCA 90 bp GCCCCTGTCAACCTTTTATTGGGAGTGGAACACATGAGGTTCAGCTCGTGCCGGGGCAGGGAGCCACACTaGCCCCTCAGTGTGTGCCTG +
Preference number: 4 (lower is better)
Translates to: APVNLLLGVEHMRFSSCRGREPH*PLSVCL
Trigger: CAGGCACACACTGAGGGGGCAGTGTGGCTCCCTGCC...CCGGCACGAGCTGAACCTCATGTGTTCCACTCCCAATAAAAGGTTGACAGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR GCA 90 bp CAGGACAGGAGGGTTTATGCAGACACACAGACACTGCTGACGGGGACAGGGATGCCCATCGCAGGGACATaGACAGCAGCAGCCACAGCC +
Preference number: 4 (lower is better)
Translates to: QDRRVYADTQTLLTGTGMPIAGT*TAAATA
Trigger: GGCTGTGGCTGCTGCTGTGCATGTCCCTGCGATGGG...CATCCCTGTCCCCGTCAGCAGTGTCTGTGTGTCTGCATAAACCCTCCTGTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR GCA 90 bp ACAAATAGTTTACAGCAGCTCATGCCCGGCATCCGCCCATGCTGGGAGACTCCCCCCATCGCAGGGACATaGACAGCAGCAGCCACAGCC +
Preference number: 4 (lower is better)
Translates to: TNSLQQLMPGIRPCWETPPIAGT*TAAATA
Trigger: GGCTGTGGCTGCTGCTGTGCATGTCCCTGCGATGGG...GGGAGTCTCCCAGCATGGGCGGATGCCGGGCATGAGCTGCTGTAAACTATTTGT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR GCA 90 bp GAGCAGGGCCCAGGTCCAGACAGCCCTCTGGCCAGATGTGACTGGAAGAGGCTGGGCAACGTCTGCTTATaGCCTGAAACTCACTGCCCT +
Preference number: 4 (lower is better)
Translates to: EQGPGPDSPLARCDWKRLGNVCL*PETHCP
Trigger: AGGGCAGTGAGTTTCAGGGCATAAGCAGACGTTGCC...CAGCCTCTTCCAGTCACATCTGGCCAGAGGGCTGTCTGGACCTGGGCCCTGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376652.9
CDS-3UTR GCA 90 bp CACTCAAGTCCAGAGTTCCCAGTGGTGCCGCCCAGACCTACTGTCCCGGGGGTGGGAGGCCAGCACCGATaGTTGTCCAGTAGGATTGAA +
Preference number: 4 (lower is better)
Translates to: HSSPEFPVVPPRPTVPGVGGQHR*LSSRIE
Trigger: TTCAATCCTACTGGACAAGCATCGGTGCTGGCCTCC...CACCCCCGGGACAGTAGGTCTGGGCGGCACCACTGGGAACTCTGGACTTGAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376652.9
CDS-3UTR CCA 90 bp GCTCGTGCCGGGCACTGTACATTCACTGAAGCAGCTCAAGGGGCTCAGCCCCGACACGCTGCTCCCTCCTaGAGTTTTCAAGCTGCCTGT +
Preference number: 4 (lower is better)
Translates to: ARAGHCTFTEAAQGAQPRHAAPS*SFQAAC
Trigger: ACAGGCAGCTTGAAAACTCCAGGAGGGAGCAGCGTG...TCGGGGCTGAGCCCCTTGAGCTGCTTCAGTGAATGTACAGTGCCCGGCACGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CCA 90 bp GTGCCGGGCACTGTACATTCACTGAAGCAGCTCAAGGGGCTCAGCCCCGACACTGGAAGGCGATCTGAGTaGATCCTCCGCCCAAGTCCA +
Preference number: 4 (lower is better)
Translates to: VPGTVHSLKQLKGLSPDTGRRSE*ILRPSP
Trigger: TGGACTTGGGCGGAGGATCCACTCAGATCGCCTTCC...AGTGTCGGGGCTGAGCCCCTTGAGCTGCTTCAGTGAATGTACAGTGCCCGGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CCA 90 bp GCATTGAGCAGGGCCCAGGTCCAGACAGCCCTCTGGCCAGATGTGACTGGAAGAGGAAGGCGATCTGAGTaGATCCTCCGCCCAAGTCCA +
Preference number: 4 (lower is better)
Translates to: ALSRAQVQTALWPDVTGRGRRSE*ILRPSP
Trigger: TGGACTTGGGCGGAGGATCCACTCAGATCGCCTTCC...TCTTCCAGTCACATCTGGCCAGAGGGCTGTCTGGACCTGGGCCCTGCTCAATGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CCA 90 bp TCAAGTCCAGAGTTCCCAGTGGTGCCGCCCAGACCTACTGTCCCGGGGGTGTTAGGAAGGCGATCTGAGTaGATCCTCCGCCCAAGTCCA +
Preference number: 4 (lower is better)
Translates to: SSPEFPVVPPRPTVPGVLGRRSE*ILRPSP
Trigger: TGGACTTGGGCGGAGGATCCACTCAGATCGCCTTCC...TAACACCCCCGGGACAGTAGGTCTGGGCGGCACCACTGGGAACTCTGGACTTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CCA 90 bp GCTCGTGCCGGGCACTGTACATTCACTGAAGCAGCTCAAGGGGCTCAGCCCCGATCCGACACACGTACTTaGCTGCGATCTCGAAGTCCC +
Preference number: 4 (lower is better)
Translates to: ARAGHCTFTEAAQGAQPRSDTRT*LRSRSP
Trigger: GGGACTTCGAGATCGCAGCCAAGTACGTGTGTCGGA...TCGGGGCTGAGCCCCTTGAGCTGCTTCAGTGAATGTACAGTGCCCGGCACGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
CDS-3UTR CCA 90 bp CCAGAGTTCCCAGTGGTGCCGCCCAGACCTACTGTCCCGGGGGTGTTATGGCTGTCAGCACTTTGCTCCTaGGAAAGCCGAACTCCTGGA +
Preference number: 4 (lower is better)
Translates to: PEFPVVPPRPTVPGVLWLSALCS*ESRTPG
Trigger: TCCAGGAGTTCGGCTTTCCCAGGAGCAAAGTGCTGA...CAGCCATAACACCCCCGGGACAGTAGGTCTGGGCGGCACCACTGGGAACTCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CCA 90 bp GCTCGTGCCGGGCACTGTACATTCACTGAAGCAGCTCAAGGGGCTCAGCCCCGAGTCCAGACAGCCCTCTaGCCAGATGTGACTGGAAGA +
Preference number: 4 (lower is better)
Translates to: ARAGHCTFTEAAQGAQPRVQTAL*PDVTGR
Trigger: TCTTCCAGTCACATCTGGCCAGAGGGCTGTCTGGAC...TCGGGGCTGAGCCCCTTGAGCTGCTTCAGTGAATGTACAGTGCCCGGCACGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CCA 90 bp TCTGGGACTGTGGCTCAGCTGACCCGTGGCACAGCTGCACCTAAGACATGGCCCGTCCAGACAGCCCTCTaGCCAGATGTGACTGGAAGA +
Preference number: 4 (lower is better)
Translates to: SGTVAQLTRGTAAPKTWPVQTAL*PDVTGR
Trigger: TCTTCCAGTCACATCTGGCCAGAGGGCTGTCTGGAC...GGGCCATGTCTTAGGTGCAGCTGTGCCACGGGTCAGCTGAGCCACAGTCCCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CCA 90 bp ACTCAAGTCCAGAGTTCCCAGTGGTGCCGCCCAGACCTACTGTCCCGGGGGTGTGTCCAGACAGCCCTCTaGCCAGATGTGACTGGAAGA +
Preference number: 4 (lower is better)
Translates to: TQVQSSQWCRPDLLSRGCVQTAL*PDVTGR
Trigger: TCTTCCAGTCACATCTGGCCAGAGGGCTGTCTGGAC...ACACCCCCGGGACAGTAGGTCTGGGCGGCACCACTGGGAACTCTGGACTTGAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CCA 90 bp CAGCCAGGACAGCCTGCACCGCCTCCCAGACTCTTGCAGGAAGGGGAGCTCTGCAGGAGAGCAGGCCTCTaGGTGAACTCACACATTCAT +
Preference number: 4 (lower is better)
Translates to: QPGQPAPPPRLLQEGELCRRAGL*VNSHIH
Trigger: ATGAATGTGTGAGTTCACCCAGAGGCCTGCTCTCCT...GCAGAGCTCCCCTTCCTGCAAGAGTCTGGGAGGCGGTGCAGGCTGTCCTGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CCA 90 bp ACTCAAGTCCAGAGTTCCCAGTGGTGCCGCCCAGACCTACTGTCCCGGGGGTGTAGACTCCCTGAAAGGTaGGCACCTGCCGTCTATGAG +
Preference number: 4 (lower is better)
Translates to: TQVQSSQWCRPDLLSRGCRLPER*APAVYE
Trigger: CTCATAGACGGCAGGTGCCCACCTTTCAGGGAGTCT...ACACCCCCGGGACAGTAGGTCTGGGCGGCACCACTGGGAACTCTGGACTTGAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CCA 90 bp ACACTGAGCAGGATGCACGGCCCGGGGCTCACACTGTCCATGGAGGAGGTGGGGTTCACAGGACACAGTTaGTGTCCAGAAAAGGGGGCT +
Preference number: 4 (lower is better)
Translates to: TLSRMHGPGLTLSMEEVGFTGHS*CPEKGA
Trigger: AGCCCCCTTTTCTGGACACCAACTGTGTCCTGTGAA...CCCCACCTCCTCCATGGACAGTGTGAGCCCCGGGCCGTGCATCCTGCTCAGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CCA 90 bp TCAAGTCCAGAGTTCCCAGTGGTGCCGCCCAGACCTACTGTCCCGGGGGTGTTACCTAAGACATGGCCCTaGCTAGGCGGGAACAGCTCA +
Preference number: 4 (lower is better)
Translates to: SSPEFPVVPPRPTVPGVLPKTWP*LGGNSS
Trigger: TGAGCTGTTCCCGCCTAGCCAGGGCCATGTCTTAGG...TAACACCCCCGGGACAGTAGGTCTGGGCGGCACCACTGGGAACTCTGGACTTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CCA 90 bp TCAAGTCCAGAGTTCCCAGTGGTGCCGCCCAGACCTACTGTCCCGGGGGTGTTACCGAGAGCTTGGTTCTaGGACTGTGGCTCAGCTGAC +
Preference number: 4 (lower is better)
Translates to: SSPEFPVVPPRPTVPGVLPRAWF*DCGSAD
Trigger: GTCAGCTGAGCCACAGTCCCAGAACCAAGCTCTCGG...TAACACCCCCGGGACAGTAGGTCTGGGCGGCACCACTGGGAACTCTGGACTTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CCA 90 bp TCAAGTCCAGAGTTCCCAGTGGTGCCGCCCAGACCTACTGTCCCGGGGGTGTTAACTCGGGATGTGGGCTaGTCTGCAGTTTCCCTGGCA +
Preference number: 4 (lower is better)
Translates to: SSPEFPVVPPRPTVPGVLTRDVG*SAVSLA
Trigger: TGCCAGGGAAACTGCAGACCAGCCCACATCCCGAGT...TAACACCCCCGGGACAGTAGGTCTGGGCGGCACCACTGGGAACTCTGGACTTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376652.9
CDS-3UTR TCA 90 bp TCTGGGACTGTGGCTCAGCTGACCCGTGGCACAGCTGCACCTAAGACATGGCCCTGTAGGCAACATAGATaGACACGCCCACACACAGCC +
Preference number: 4 (lower is better)
Translates to: SGTVAQLTRGTAAPKTWPCRQHR*TRPHTA
Trigger: GGCTGTGTGTGGGCGTGTTCATCTATGTTGCCTACA...GGGCCATGTCTTAGGTGCAGCTGTGCCACGGGTCAGCTGAGCCACAGTCCCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000433259.6
CDS-3UTR TCA 90 bp GAGCAGGGCCCAGGTCCAGACAGCCCTCTGGCCAGATGTGACTGGAAGAGGCTGAGTTCCCGGATTCCCTaGGCGCTCTTTTCAACATCA +
Preference number: 4 (lower is better)
Translates to: EQGPGPDSPLARCDWKRLSSRIP*ALFSTS
Trigger: TGATGTTGAAAAGAGCGCTCAGGGAATCCGGGAACT...CAGCCTCTTCCAGTCACATCTGGCCAGAGGGCTGTCTGGACCTGGGCCCTGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000433259.6
CDS-3UTR TCA 90 bp ACACTGAGCAGGATGCACGGCCCGGGGCTCACACTGTCCATGGAGGAGGTGGGGCATCTGTTCCGTTCATaGTGGAAACACAGTCATCCC +
Preference number: 4 (lower is better)
Translates to: TLSRMHGPGLTLSMEEVGHLFRS*WKHSHP
Trigger: GGGATGACTGTGTTTCCATCATGAACGGAACAGATG...CCCCACCTCCTCCATGGACAGTGTGAGCCCCGGGCCGTGCATCCTGCTCAGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR TCA 90 bp GCTCGTGCCGGGCACTGTACATTCACTGAAGCAGCTCAAGGGGCTCAGCCCCGAGAGACAAGCAAGGGCTaGCCAACTCCTTTCCATCCT +
Preference number: 4 (lower is better)
Translates to: ARAGHCTFTEAAQGAQPRETSKG*PTPFHP
Trigger: AGGATGGAAAGGAGTTGGTCAGCCCTTGCTTGTCTC...TCGGGGCTGAGCCCCTTGAGCTGCTTCAGTGAATGTACAGTGCCCGGCACGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
CDS-3UTR TCA 90 bp GCTCGTGCCGGGCACTGTACATTCACTGAAGCAGCTCAAGGGGCTCAGCCCCGACTGAAACCCTGTACGTaGCTTCTGCGTGTTCCCACT +
Preference number: 4 (lower is better)
Translates to: ARAGHCTFTEAAQGAQPRLKPCT*LLRVPT
Trigger: AGTGGGAACACGCAGAAGTCACGTACAGGGTTTCAG...TCGGGGCTGAGCCCCTTGAGCTGCTTCAGTGAATGTACAGTGCCCGGCACGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
CDS-3UTR TCA 90 bp TCTGGGACTGTGGCTCAGCTGACCCGTGGCACAGCTGCACCTAAGACATGGCCCCTGAAACCCTGTACGTaGCTTCTGCGTGTTCCCACT +
Preference number: 4 (lower is better)
Translates to: SGTVAQLTRGTAAPKTWPLKPCT*LLRVPT
Trigger: AGTGGGAACACGCAGAAGTCACGTACAGGGTTTCAG...GGGCCATGTCTTAGGTGCAGCTGTGCCACGGGTCAGCTGAGCCACAGTCCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
CDS-3UTR TCA 90 bp AGGCAAACACACTCAAGTCCAGAGTTCCCAGTGGTGCCGCCCAGACCTACTGTCCCCTCTGGCCAGATGTaGCTGGAAGAGGCTGATGCC +
Preference number: 4 (lower is better)
Translates to: RQTHSSPEFPVVPPRPTVPSGQM*LEEADA
Trigger: GGCATCAGCCTCTTCCAGTCACATCTGGCCAGAGGG...GACAGTAGGTCTGGGCGGCACCACTGGGAACTCTGGACTTGAGTGTGTTTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR TCA 90 bp TGCCCTGAAACTCACTGCCCTGGGATCCTGCCATCCAAACACGGGGACTGCAGGGAGCAGGCCTCTGGGTaGACTCACACATTCATACCC +
Preference number: 4 (lower is better)
Translates to: CPETHCPGILPSKHGDCREQASG*THTFIP
Trigger: GGGTATGAATGTGTGAGTTCACCCAGAGGCCTGCTC...CCTGCAGTCCCCGTGTTTGGATGGCAGGATCCCAGGGCAGTGAGTTTCAGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376652.9
CDS-3UTR TCA 90 bp GCATTGAGCAGGGCCCAGGTCCAGACAGCCCTCTGGCCAGATGTGACTGGAAGAAAACCACACAATGTGTaGGGAGAGCAGGCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: ALSRAQVQTALWPDVTGRKPHNV*GEQASG
Trigger: CCCAGAGGCCTGCTCTCCTCACACATTGTGTGGTTT...TCTTCCAGTCACATCTGGCCAGAGGGCTGTCTGGACCTGGGCCCTGCTCAATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR TCA 90 bp CTGTGCAGGCCTCCACCACGTGGCTCCATCAGCATTCGCTGCAGCCCTGGGAGGACACTCAGAGAGAAATaGCTTGCATACTTTGCCGGG +
Preference number: 4 (lower is better)
Translates to: LCRPPPRGSISIRCSPGRTLREK*LAYFAG
Trigger: CCCGGCAAAGTATGCAAGTCATTTCTCTCTGAGTGT...CCTCCCAGGGCTGCAGCGAATGCTGATGGAGCCACGTGGTGGAGGCCTGCACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376652.9
CDS-3UTR TCA 90 bp GAGCAGGGCCCAGGTCCAGACAGCCCTCTGGCCAGATGTGACTGGAAGAGGCTGCGTGTGAGACCTGTCTaGGCTTGTCAATGCACACAT +
Preference number: 4 (lower is better)
Translates to: EQGPGPDSPLARCDWKRLRVRPV*ACQCTH
Trigger: ATGTGTGCATTGACAAGCTCAGACAGGTCTCACACG...CAGCCTCTTCCAGTCACATCTGGCCAGAGGGCTGTCTGGACCTGGGCCCTGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376652.9
CDS-3UTR TCA 90 bp CCACTGCTGTGTCCTCGAGAGGGATGTCGACAGGACTGGAAATACGCCACCCCCCGTCTGCTTATGCCCTaGAACTCACTGCCCTGGGAT +
Preference number: 4 (lower is better)
Translates to: PLLCPREGCRQDWKYATPRLLMP*NSLPWD
Trigger: ATCCCAGGGCAGTGAGTTTCAGGGCATAAGCAGACG...GGGGGTGGCGTATTTCCAGTCCTGTCGACATCCCTCTCGAGGACACAGCAGTGG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000376652.9
CDS-3UTR TCA 90 bp AGGCAAACACACTCAAGTCCAGAGTTCCCAGTGGTGCCGCCCAGACCTACTGTCCCTTCACGCTCCAGGTaGCTCCCACCGTACTTGGCT +
Preference number: 4 (lower is better)
Translates to: RQTHSSPEFPVVPPRPTVPSRSR*LPPYLA
Trigger: AGCCAAGTACGGTGGGAGTCACCTGGAGCGTGAAGG...GACAGTAGGTCTGGGCGGCACCACTGGGAACTCTGGACTTGAGTGTGTTTGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376666.3
ENST00000433259.6
CDS-3UTR GCA 90 bp GGTGGCATTGAGCAGGGCCCAGGTCCAGACAGCCCTCTGGCCAGATGTGACTGGGGTGCCAGTGCTTCCTaGATCAAACATGATCCCGTA +
Preference number: 4 (lower is better)
Translates to: GGIEQGPGPDSPLARCDWGASAS*IKHDPV
Trigger: TACGGGATCATGTTTGATGCAGGAAGCACTGGCACC...CCAGTCACATCTGGCCAGAGGGCTGTCTGGACCTGGGCCCTGCTCAATGCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000433259.6
CDS-3UTR GCA 90 bp CGTCCAGGACAGGAGGGTTTATGCAGACACACAGACACTGCTGACGGGGACAGGCCAGCATGCCCACGCTaGTCCCTCCTGGAGTTTTCA +
Preference number: 4 (lower is better)
Translates to: RPGQEGLCRHTDTADGDRPACPR*SLLEFS
Trigger: TGAAAACTCCAGGAGGGAGCAGCGTGGGCATGCTGG...CCTGTCCCCGTCAGCAGTGTCTGTGTGTCTGCATAAACCCTCCTGTCCTGGACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR GCA 90 bp AACACAGTTTCTACACAAGCACTTGGCACCCACACGACAGAGACGTCACTCAAGGGGAGGCCTGCAGGGTaGCCTCCACGCGTGGCAGGA +
Preference number: 4 (lower is better)
Translates to: NTVSTQALGTHTTETSLKGRPAG*PPRVAG
Trigger: TCCTGCCACGCGTGGAGGGCACCCTGCAGGCCTCCC...CTTGAGTGACGTCTCTGTCGTGTGGGTGCCAAGTGCTTGTGTAGAAACTGTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR GCA 90 bp CAGGACAGGAGGGTTTATGCAGACACACAGACACTGCTGACGGGGACAGGGATGGCAGCACACAGCTCGTaGAGGCTTGCCGCTGCTTTC +
Preference number: 4 (lower is better)
Translates to: QDRRVYADTQTLLTGTGMAAHSS*RLAAAF
Trigger: GAAAGCAGCGGCAAGCCTGCACGAGCTGTGTGCTGC...CATCCCTGTCCCCGTCAGCAGTGTCTGTGTGTCTGCATAAACCCTCCTGTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
CDS-3UTR GCA 90 bp ACTCAAGTCCAGAGTTCCCAGTGGTGCCGCCCAGACCTACTGTCCCGGGGGTGTGAGGCCCACACCAGCTaGAAGGTCGTAATAGTAGGA +
Preference number: 4 (lower is better)
Translates to: TQVQSSQWCRPDLLSRGCEAHTS*KVVIVG
Trigger: TCCTACTATTACGACCTTGCAGCTGGTGTGGGCCTC...ACACCCCCGGGACAGTAGGTCTGGGCGGCACCACTGGGAACTCTGGACTTGAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR GCA 90 bp AGGCAAACACACTCAAGTCCAGAGTTCCCAGTGGTGCCGCCCAGACCTACTGTCGTCCCAGAGCCAGTGTaGAGAAAGTGCCAGCACGGC +
Preference number: 4 (lower is better)
Translates to: RQTHSSPEFPVVPPRPTVVPEPV*RKCQHG
Trigger: GCCGTGCTGGCACTTTCTGCACACTGGCTCTGGGAC...GACAGTAGGTCTGGGCGGCACCACTGGGAACTCTGGACTTGAGTGTGTTTGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR GCA 90 bp GTGCTGTGGCTCCTCAGGATGAAGTCACGTCCAGGACAGGAGGGTTTATGCAGAGCAGCCAGGACAGCCTaGACCGCCTCCCAGACTCTT +
Preference number: 4 (lower is better)
Translates to: VLWLLRMKSRPGQEGLCRAARTA*TASQTL
Trigger: AAGAGTCTGGGAGGCGGTGCAGGCTGTCCTGGCTGC...TCTGCATAAACCCTCCTGTCCTGGACGTGACTTCATCCTGAGGAGCCACAGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR GCA 90 bp TCTGGGACTGTGGCTCAGCTGACCCGTGGCACAGCTGCACCTAAGACATGGCCCATGAGGTTCAGCTCGTaGCGGGCACTGTACATTCAC +
Preference number: 4 (lower is better)
Translates to: SGTVAQLTRGTAAPKTWPMRFSS*RALYIH
Trigger: GTGAATGTACAGTGCCCGGCACGAGCTGAACCTCAT...GGGCCATGTCTTAGGTGCAGCTGTGCCACGGGTCAGCTGAGCCACAGTCCCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR GCA 90 bp TTCATACCCAAGGAAGAGGCAAACACACTCAAGTCCAGAGTTCCCAGTGGTGCCGGCCGTGCTGTGGGCTaGTGGCCTGGCACAGGAGGA +
Preference number: 4 (lower is better)
Translates to: FIPKEEANTLKSRVPSGAGRAVG*WPGTGG
Trigger: TCCTCCTGTGCCAGGCCAGCAGCCCACAGCACGGCC...GGCACCACTGGGAACTCTGGACTTGAGTGTGTTTGCCTCTTCCTTGGGTATGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376652.9
CDS-3UTR GCA 90 bp AGGCAAACACACTCAAGTCCAGAGTTCCCAGTGGTGCCGCCCAGACCTACTGTCTCCTTTCCTGCTCTGTaGAGGCCTCCACCACGTGGC +
Preference number: 4 (lower is better)
Translates to: RQTHSSPEFPVVPPRPTVSFPAL*RPPPRG
Trigger: GCCACGTGGTGGAGGCCTGCACAGAGCAGGAAAGGA...GACAGTAGGTCTGGGCGGCACCACTGGGAACTCTGGACTTGAGTGTGTTTGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376652.9
CDS-3UTR GCA 90 bp CCCAAGGAAGAGGCAAACACACTCAAGTCCAGAGTTCCCAGTGGTGCCGCCCAGACTGCCCTGGGATCCTaGCATCCAAACACGGGGACT +
Preference number: 4 (lower is better)
Translates to: PKEEANTLKSRVPSGAAQTALGS*HPNTGT
Trigger: AGTCCCCGTGTTTGGATGGCAGGATCCCAGGGCAGT...CTGGGCGGCACCACTGGGAACTCTGGACTTGAGTGTGTTTGCCTCTTCCTTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376652.9
CDS-3UTR CCA 90 bp GTGCCGCCCAGACCTACTGTCCCGGGGGTGTTATGGCTGTCCCTCGGCTTCCCCATAGGCAGAAAGACCTaGCTTCAGTGCTTTGAAGGT +
Preference number: 4 (lower is better)
Translates to: VPPRPTVPGVLWLSLGFPIGRKT*LQCFEG
Trigger: ACCTTCAAAGCACTGAAGCCAGGTCTTTCTGCCTAT...GGGGAAGCCGAGGGACAGCCATAACACCCCCGGGACAGTAGGTCTGGGCGGCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000433259.6
CDS-3UTR CCA 90 bp GCTCGTGCCGGGCACTGTACATTCACTGAAGCAGCTCAAGGGGCTCAGCCCCGACGATGTAATGAAAAATaGCCCCCAGAGCCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: ARAGHCTFTEAAQGAQPRRCNEK*PPEPSW
Trigger: CCAGCTGGGCTCTGGGGGCCATTTTTCATTACATCG...TCGGGGCTGAGCCCCTTGAGCTGCTTCAGTGAATGTACAGTGCCCGGCACGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CCA 90 bp CATTCATACCCAAGGAAGAGGCAAACACACTCAAGTCCAGAGTTCCCAGTGGTGCCCGCGGACGGGGCATaGGGATGGGACAGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: HSYPRKRQTHSSPEFPVVPADGA*GWDRQG
Trigger: TCCCTGCCTGTCCCATCCCCATGCCCCGTCCGCGGG...CACCACTGGGAACTCTGGACTTGAGTGTGTTTGCCTCTTCCTTGGGTATGAATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CCA 90 bp CGTCACTCAAGCAGCACAGCCACAAATAGTTTACAGCAGCTCATGCCCGGCATCGTCCCGGGGGTGTTATaGCTGTCCCTCGGCTTCCCC +
Preference number: 4 (lower is better)
Translates to: RHSSSTATNSLQQLMPGIVPGVL*LSLGFP
Trigger: GGGGAAGCCGAGGGACAGCCATAACACCCCCGGGAC...GATGCCGGGCATGAGCTGCTGTAAACTATTTGTGGCTGTGCTGCTTGAGTGACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CCA 90 bp ACAAATAGTTTACAGCAGCTCATGCCCGGCATCCGCCCATGCTGGGAGACTCCCGTCCAGAGTTCCCAGTaGTGCCGCCCAGACCTACTG +
Preference number: 4 (lower is better)
Translates to: TNSLQQLMPGIRPCWETPVQSSQ*CRPDLL
Trigger: CAGTAGGTCTGGGCGGCACCACTGGGAACTCTGGAC...GGGAGTCTCCCAGCATGGGCGGATGCCGGGCATGAGCTGCTGTAAACTATTTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CCA 90 bp CAGGACAGGAGGGTTTATGCAGACACACAGACACTGCTGACGGGGACAGGGATGGTCCAGAGTTCCCAGTaGTGCCGCCCAGACCTACTG +
Preference number: 4 (lower is better)
Translates to: QDRRVYADTQTLLTGTGMVQSSQ*CRPDLL
Trigger: CAGTAGGTCTGGGCGGCACCACTGGGAACTCTGGAC...CATCCCTGTCCCCGTCAGCAGTGTCTGTGTGTCTGCATAAACCCTCCTGTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CCA 90 bp ACAAATAGTTTACAGCAGCTCATGCCCGGCATCCGCCCATGCTGGGAGACTCCCGCTGCACCTAAGACATaGCCCTGGCTAGGCGGGAAC +
Preference number: 4 (lower is better)
Translates to: TNSLQQLMPGIRPCWETPAAPKT*PWLGGN
Trigger: GTTCCCGCCTAGCCAGGGCCATGTCTTAGGTGCAGC...GGGAGTCTCCCAGCATGGGCGGATGCCGGGCATGAGCTGCTGTAAACTATTTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR TCA 90 bp GACACTGACGCCACACTGAGCAGGATGCACGGCCCGGGGCTCACACTGTCCATGCATCTGTTCCGTTCATaGTGGAAACACAGTCATCCC +
Preference number: 4 (lower is better)
Translates to: DTDATLSRMHGPGLTLSMHLFRS*WKHSHP
Trigger: GGGATGACTGTGTTTCCATCATGAACGGAACAGATG...CATGGACAGTGTGAGCCCCGGGCCGTGCATCCTGCTCAGTGTGGCGTCAGTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR TCA 90 bp TGGCTCCTCAGGATGAAGTCACGTCCAGGACAGGAGGGTTTATGCAGACACACAGGCAGGAAGGCGATCTaGGTGGATCCTCCGCCCAAG +
Preference number: 4 (lower is better)
Translates to: WLLRMKSRPGQEGLCRHTGRKAI*VDPPPK
Trigger: CTTGGGCGGAGGATCCACTCAGATCGCCTTCCTGCC...TGTGTGTCTGCATAAACCCTCCTGTCCTGGACGTGACTTCATCCTGAGGAGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR TCA 90 bp TCAAGTCCAGAGTTCCCAGTGGTGCCGCCCAGACCTACTGTCCCGGGGGTGTTACTGAAACCCTGTACGTaGCTTCTGCGTGTTCCCACT +
Preference number: 4 (lower is better)
Translates to: SSPEFPVVPPRPTVPGVLLKPCT*LLRVPT
Trigger: AGTGGGAACACGCAGAAGTCACGTACAGGGTTTCAG...TAACACCCCCGGGACAGTAGGTCTGGGCGGCACCACTGGGAACTCTGGACTTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
CDS-3UTR TCA 90 bp AGGCAAACACACTCAAGTCCAGAGTTCCCAGTGGTGCCGCCCAGACCTACTGTCTGTGGCTCCTCAGGATaGAGTCACGTCCAGGACAGG +
Preference number: 4 (lower is better)
Translates to: RQTHSSPEFPVVPPRPTVCGSSG*SHVQDR
Trigger: CCTGTCCTGGACGTGACTTCATCCTGAGGAGCCACA...GACAGTAGGTCTGGGCGGCACCACTGGGAACTCTGGACTTGAGTGTGTTTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR TCA 90 bp GTGCTGTGGCTCCTCAGGATGAAGTCACGTCCAGGACAGGAGGGTTTATGCAGACCCTGGGGAGGAAACTaGCAGGCTGGGAGACAAGAC +
Preference number: 4 (lower is better)
Translates to: VLWLLRMKSRPGQEGLCRPWGGN*QAGRQD
Trigger: GTCTTGTCTCCCAGCCTGTCAGTTTCCTCCCCAGGG...TCTGCATAAACCCTCCTGTCCTGGACGTGACTTCATCCTGAGGAGCCACAGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR TCA 90 bp TCAAGTCCAGAGTTCCCAGTGGTGCCGCCCAGACCTACTGTCCCGGGGGTGTTAGCACTGTACATTCACTaGAGCAGCTCAAGGGGCTCA +
Preference number: 4 (lower is better)
Translates to: SSPEFPVVPPRPTVPGVLALYIH*SSSRGS
Trigger: TGAGCCCCTTGAGCTGCTTCAGTGAATGTACAGTGC...TAACACCCCCGGGACAGTAGGTCTGGGCGGCACCACTGGGAACTCTGGACTTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR GCA 90 bp GTGCAGAAAGTGCCAGCACGGCCTGTGCTGTGGCTCCTCAGGATGAAGTCACGTCTTGCCGCTGCTTTCTaGCCTGAAACCCTGTACGTG +
Preference number: 4 (lower is better)
Translates to: VQKVPARPVLWLLRMKSRLAAAF*PETLYV
Trigger: CACGTACAGGGTTTCAGGGCAGAAAGCAGCGGCAAG...ACGTGACTTCATCCTGAGGAGCCACAGCACAGGCCGTGCTGGCACTTTCTGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
CDS-3UTR GCA 90 bp TCAAGTCCAGAGTTCCCAGTGGTGCCGCCCAGACCTACTGTCCCGGGGGTGTTAGAGGCCCACACCAGCTaGAAGGTCGTAATAGTAGGA +
Preference number: 4 (lower is better)
Translates to: SSPEFPVVPPRPTVPGVLEAHTS*KVVIVG
Trigger: TCCTACTATTACGACCTTGCAGCTGGTGTGGGCCTC...TAACACCCCCGGGACAGTAGGTCTGGGCGGCACCACTGGGAACTCTGGACTTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR GCA 90 bp ACAAATAGTTTACAGCAGCTCATGCCCGGCATCCGCCCATGCTGGGAGACTCCCTGCATGAGAAGGGGCTaGTCTGCGGCTGTGTCTCCA +
Preference number: 4 (lower is better)
Translates to: TNSLQQLMPGIRPCWETPCMRRG*SAAVSP
Trigger: TGGAGACACAGCCGCAGAGCAGCCCCTTCTCATGCA...GGGAGTCTCCCAGCATGGGCGGATGCCGGGCATGAGCTGCTGTAAACTATTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR GCA 90 bp CTACACAAGCACTTGGCACCCACACGACAGAGACGTCACTCAAGCAGCACAGCCTGCATGAGAAGGGGCTaGTCTGCGGCTGTGTCTCCA +
Preference number: 4 (lower is better)
Translates to: LHKHLAPTRQRRHSSSTACMRRG*SAAVSP
Trigger: TGGAGACACAGCCGCAGAGCAGCCCCTTCTCATGCA...GGCTGTGCTGCTTGAGTGACGTCTCTGTCGTGTGGGTGCCAAGTGCTTGTGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR GCA 90 bp GTGCTGTGGCTCCTCAGGATGAAGTCACGTCCAGGACAGGAGGGTTTATGCAGAGTCCCAGAGCCAGTGTaGAGAAAGTGCCAGCACGGC +
Preference number: 4 (lower is better)
Translates to: VLWLLRMKSRPGQEGLCRVPEPV*RKCQHG
Trigger: GCCGTGCTGGCACTTTCTGCACACTGGCTCTGGGAC...TCTGCATAAACCCTCCTGTCCTGGACGTGACTTCATCCTGAGGAGCCACAGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR GCA 90 bp CGTCACTCAAGCAGCACAGCCACAAATAGTTTACAGCAGCTCATGCCCGGCATCCGCCTCCCAGACTCTTaGAGGAAGGGGAGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: RHSSSTATNSLQQLMPGIRLPDS*RKGSSA
Trigger: GGCAGAGCTCCCCTTCCTGCAAGAGTCTGGGAGGCG...GATGCCGGGCATGAGCTGCTGTAAACTATTTGTGGCTGTGCTGCTTGAGTGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR GCA 90 bp CTACACAAGCACTTGGCACCCACACGACAGAGACGTCACTCAAGCAGCACAGCCGTTTACAGCAGCTCATaGCCGGCATCCGCCCATGCT +
Preference number: 4 (lower is better)
Translates to: LHKHLAPTRQRRHSSSTAVYSSS*PASAHA
Trigger: AGCATGGGCGGATGCCGGGCATGAGCTGCTGTAAAC...GGCTGTGCTGCTTGAGTGACGTCTCTGTCGTGTGGGTGCCAAGTGCTTGTGTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR GCA 90 bp GCATTGAGCAGGGCCCAGGTCCAGACAGCCCTCTGGCCAGATGTGACTGGAAGAATGAGGTTCAGCTCGTaGCGGGCACTGTACATTCAC +
Preference number: 4 (lower is better)
Translates to: ALSRAQVQTALWPDVTGRMRFSS*RALYIH
Trigger: GTGAATGTACAGTGCCCGGCACGAGCTGAACCTCAT...TCTTCCAGTCACATCTGGCCAGAGGGCTGTCTGGACCTGGGCCCTGCTCAATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR GCA 90 bp GTGCCGGGCACTGTACATTCACTGAAGCAGCTCAAGGGGCTCAGCCCCGACACTTGCCAGGTGGGCAAATaGTACTGTCGCTCAACGAGA +
Preference number: 4 (lower is better)
Translates to: VPGTVHSLKQLKGLSPDTCQVGK*YCRSTR
Trigger: TCTCGTTGAGCGACAGTAGCATTTGCCCACCTGGCA...AGTGTCGGGGCTGAGCCCCTTGAGCTGCTTCAGTGAATGTACAGTGCCCGGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376652.9
CDS-3UTR CCA 90 bp GACACTGACGCCACACTGAGCAGGATGCACGGCCCGGGGCTCACACTGTCCATGGCAGGCTCCCGTGGTTaGATATTTTTCTCATCCTTG +
Preference number: 4 (lower is better)
Translates to: DTDATLSRMHGPGLTLSMAGSRG*IFFSSL
Trigger: CAAGGATGAGAAAAATATCCAACCACGGGAGCCTGC...CATGGACAGTGTGAGCCCCGGGCCGTGCATCCTGCTCAGTGTGGCGTCAGTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000433259.6
CDS-3UTR CCA 90 bp CAACCTTTTATTGGGAGTGGAACACATGAGGTTCAGCTCGTGCCGGGCACTGTAATGCTGAAGAAGGCCTaGGTGGCGGTGGCCCGGTGC +
Preference number: 4 (lower is better)
Translates to: QPFIGSGTHEVQLVPGTVMLKKA*VAVARC
Trigger: GCACCGGGCCACCGCCACCCAGGCCTTCTTCAGCAT...TACAGTGCCCGGCACGAGCTGAACCTCATGTGTTCCACTCCCAATAAAAGGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000433259.6
CDS-3UTR CCA 90 bp CAGCCAGGACAGCCTGCACCGCCTCCCAGACTCTTGCAGGAAGGGGAGCTCTGCGCTTTGAAGGTTTCGTaGGTTAACGTGGGAGTTTCT +
Preference number: 4 (lower is better)
Translates to: QPGQPAPPPRLLQEGELCALKVS*VNVGVS
Trigger: AGAAACTCCCACGTTAACCCACGAAACCTTCAAAGC...GCAGAGCTCCCCTTCCTGCAAGAGTCTGGGAGGCGGTGCAGGCTGTCCTGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000433259.6
CDS-3UTR CCA 90 bp CAGCCAGGACAGCCTGCACCGCCTCCCAGACTCTTGCAGGAAGGGGAGCTCTGCTTCTGCAGTAACTTCTaGGCCTTTTCTCCAGGTAAC +
Preference number: 4 (lower is better)
Translates to: QPGQPAPPPRLLQEGELCFCSNF*AFSPGN
Trigger: GTTACCTGGAGAAAAGGCCCAGAAGTTACTGCAGAA...GCAGAGCTCCCCTTCCTGCAAGAGTCTGGGAGGCGGTGCAGGCTGTCCTGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CCA 90 bp TGGCTCCTCAGGATGAAGTCACGTCCAGGACAGGAGGGTTTATGCAGACACACAGGTGCCCTCCACGCGTaGCAGGAAGGCGATCTGAGT +
Preference number: 4 (lower is better)
Translates to: WLLRMKSRPGQEGLCRHTGALHA*QEGDLS
Trigger: ACTCAGATCGCCTTCCTGCCACGCGTGGAGGGCACC...TGTGTGTCTGCATAAACCCTCCTGTCCTGGACGTGACTTCATCCTGAGGAGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CCA 90 bp ACTCAAGTCCAGAGTTCCCAGTGGTGCCGCCCAGACCTACTGTCCCGGGGGTGTCCCCCAGAGCCCAGCTaGTCTCAACATTGTCAATTT +
Preference number: 4 (lower is better)
Translates to: TQVQSSQWCRPDLLSRGCPPEPS*SQHCQF
Trigger: AAATTGACAATGTTGAGACCAGCTGGGCTCTGGGGG...ACACCCCCGGGACAGTAGGTCTGGGCGGCACCACTGGGAACTCTGGACTTGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CCA 90 bp TCTGGGACTGTGGCTCAGCTGACCCGTGGCACAGCTGCACCTAAGACATGGCCCCCCCCAGAGCCCAGCTaGTCTCAACATTGTCAATTT +
Preference number: 4 (lower is better)
Translates to: SGTVAQLTRGTAAPKTWPPPEPS*SQHCQF
Trigger: AAATTGACAATGTTGAGACCAGCTGGGCTCTGGGGG...GGGCCATGTCTTAGGTGCAGCTGTGCCACGGGTCAGCTGAGCCACAGTCCCAGA
58% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CCA 90 bp GAACAGCTCACAGTAGCGATACATTCACAGGACACAGTTGGTGTCCAGAAAAGGCCCGCGGACGGGGCATaGGGATGGGACAGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: EQLTVAIHSQDTVGVQKRPADGA*GWDRQG
Trigger: TCCCTGCCTGTCCCATCCCCATGCCCCGTCCGCGGG...CCTTTTCTGGACACCAACTGTGTCCTGTGAATGTATCGCTACTGTGAGCTGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CCA 90 bp TCTGGGACTGTGGCTCAGCTGACCCGTGGCACAGCTGCACCTAAGACATGGCCCAGGAGAGCAGGCCTCTaGGTGAACTCACACATTCAT +
Preference number: 4 (lower is better)
Translates to: SGTVAQLTRGTAAPKTWPRRAGL*VNSHIH
Trigger: ATGAATGTGTGAGTTCACCCAGAGGCCTGCTCTCCT...GGGCCATGTCTTAGGTGCAGCTGTGCCACGGGTCAGCTGAGCCACAGTCCCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CCA 90 bp AGGCAAACACACTCAAGTCCAGAGTTCCCAGTGGTGCCGCCCAGACCTACTGTCCCTAAGACATGGCCCTaGCTAGGCGGGAACAGCTCA +
Preference number: 4 (lower is better)
Translates to: RQTHSSPEFPVVPPRPTVPKTWP*LGGNSS
Trigger: TGAGCTGTTCCCGCCTAGCCAGGGCCATGTCTTAGG...GACAGTAGGTCTGGGCGGCACCACTGGGAACTCTGGACTTGAGTGTGTTTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CCA 90 bp GTGCTGTGGCTCCTCAGGATGAAGTCACGTCCAGGACAGGAGGGTTTATGCAGAGCTGCACCTAAGACATaGCCCTGGCTAGGCGGGAAC +
Preference number: 4 (lower is better)
Translates to: VLWLLRMKSRPGQEGLCRAAPKT*PWLGGN
Trigger: GTTCCCGCCTAGCCAGGGCCATGTCTTAGGTGCAGC...TCTGCATAAACCCTCCTGTCCTGGACGTGACTTCATCCTGAGGAGCCACAGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CCA 90 bp CTTGCTGAACAGAATGACATGGGGACTTGCAGCTCACTCGAGGTTATGTGCCCAGAGGTGGGCGGATGGTaGCCCGAGACACCGAGAGCT +
Preference number: 4 (lower is better)
Translates to: LAEQNDMGTCSSLEVMCPEVGGW*PETPRA
Trigger: AGCTCTCGGTGTCTCGGGCCACCATCCGCCCACCTC...TGGGCACATAACCTCGAGTGAGCTGCAAGTCCCCATGTCATTCTGTTCAGCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376652.9
CDS-3UTR TCA 90 bp AGGCAAACACACTCAAGTCCAGAGTTCCCAGTGGTGCCGCCCAGACCTACTGTCCGCTGCTTTCTGCCCTaGAACCCTGTACGTGACTTC +
Preference number: 4 (lower is better)
Translates to: RQTHSSPEFPVVPPRPTVRCFLP*NPVRDF
Trigger: GAAGTCACGTACAGGGTTTCAGGGCAGAAAGCAGCG...GACAGTAGGTCTGGGCGGCACCACTGGGAACTCTGGACTTGAGTGTGTTTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
CDS-3UTR TCA 90 bp GTGCTGTGGCTCCTCAGGATGAAGTCACGTCCAGGACAGGAGGGTTTATGCAGATGTGGCTCCTCAGGATaGAGTCACGTCCAGGACAGG +
Preference number: 4 (lower is better)
Translates to: VLWLLRMKSRPGQEGLCRCGSSG*SHVQDR
Trigger: CCTGTCCTGGACGTGACTTCATCCTGAGGAGCCACA...TCTGCATAAACCCTCCTGTCCTGGACGTGACTTCATCCTGAGGAGCCACAGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR TCA 90 bp GGAGAAGCCCCTGTCAACCTTTTATTGGGAGTGGAACACATGAGGTTCAGCTCGTGCTGGGAGACTCCCTaGAAGGTGGGCACCTGCCGT +
Preference number: 4 (lower is better)
Translates to: GEAPVNLLLGVEHMRFSSCWETP*KVGTCR
Trigger: ACGGCAGGTGCCCACCTTTCAGGGAGTCTCCCAGCA...CGAGCTGAACCTCATGTGTTCCACTCCCAATAAAAGGTTGACAGGGGCTTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR GCA 90 bp GGAGAAGCCCCTGTCAACCTTTTATTGGGAGTGGAACACATGAGGTTCAGCTCGACCCACGGAGACGAGTaGCCTTTTCCGGGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: GEAPVNLLLGVEHMRFSSTHGDE*PFPGSR
Trigger: CCTGCTCCCCGGAAAAGGGCACTCGTCTCCGTGGGT...CGAGCTGAACCTCATGTGTTCCACTCCCAATAAAAGGTTGACAGGGGCTTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000433259.6
CDS-3UTR GCA 90 bp AGAGAAGGAGAAGCCCCTGTCAACCTTTTATTGGGAGTGGAACACATGAGGTTCCCGGGCCCCCGGGGCTaGCCTGGTGATGCTGAAGAA +
Preference number: 4 (lower is better)
Translates to: REGEAPVNLLLGVEHMRFPGPRG*PGDAEE
Trigger: TTCTTCAGCATCACCAGGGCAGCCCCGGGGGCCCGG...GAACCTCATGTGTTCCACTCCCAATAAAAGGTTGACAGGGGCTTCTCCTTCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000433259.6
CDS-3UTR GCA 90 bp CCCAAGGAAGAGGCAAACACACTCAAGTCCAGAGTTCCCAGTGGTGCCGCCCAGAGACGTGTACTCGGGTaGCAGTGCTTCCTGCATCAA +
Preference number: 4 (lower is better)
Translates to: PKEEANTLKSRVPSGAAQRRVLG*QCFLHQ
Trigger: TTGATGCAGGAAGCACTGGCACCCGAGTACACGTCT...CTGGGCGGCACCACTGGGAACTCTGGACTTGAGTGTGTTTGCCTCTTCCTTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000433259.6
CDS-3UTR GCA 90 bp GCCCCTGTCAACCTTTTATTGGGAGTGGAACACATGAGGTTCAGCTCGTGCCGGGTTAAACATCCGCAGTaGCGTCAGGTAGCCGGGTGG +
Preference number: 4 (lower is better)
Translates to: APVNLLLGVEHMRFSSCRVKHPQ*RQVAGW
Trigger: CCACCCGGCTACCTGACGGCACTGCGGATGTTTAAC...CCGGCACGAGCTGAACCTCATGTGTTCCACTCCCAATAAAAGGTTGACAGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR GCA 90 bp AGAGAAGGAGAAGCCCCTGTCAACCTTTTATTGGGAGTGGAACACATGAGGTTCCCATCCTTAGCAGGCTaGCCCTCCACGCCGCCCAGG +
Preference number: 4 (lower is better)
Translates to: REGEAPVNLLLGVEHMRFPSLAG*PSTPPR
Trigger: CCTGGGCGGCGTGGAGGGGCAGCCTGCTAAGGATGG...GAACCTCATGTGTTCCACTCCCAATAAAAGGTTGACAGGGGCTTCTCCTTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
CDS-3UTR GCA 90 bp GTGCCGGGCACTGTACATTCACTGAAGCAGCTCAAGGGGCTCAGCCCCGACACTCCTGTACGTGACTTCTaGGTGTTCCCACTCTCCTTT +
Preference number: 4 (lower is better)
Translates to: VPGTVHSLKQLKGLSPDTPVRDF*VFPLSF
Trigger: AAAGGAGAGTGGGAACACGCAGAAGTCACGTACAGG...AGTGTCGGGGCTGAGCCCCTTGAGCTGCTTCAGTGAATGTACAGTGCCCGGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
CDS-3UTR GCA 90 bp GCATTGAGCAGGGCCCAGGTCCAGACAGCCCTCTGGCCAGATGTGACTGGAAGACCTGTACGTGACTTCTaGGTGTTCCCACTCTCCTTT +
Preference number: 4 (lower is better)
Translates to: ALSRAQVQTALWPDVTGRPVRDF*VFPLSF
Trigger: AAAGGAGAGTGGGAACACGCAGAAGTCACGTACAGG...TCTTCCAGTCACATCTGGCCAGAGGGCTGTCTGGACCTGGGCCCTGCTCAATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
CDS-3UTR GCA 90 bp CAACCTTTTATTGGGAGTGGAACACATGAGGTTCAGCTCGTGCCGGGCACTGTACCCCCACCACCAGGCTaGCTCCCTTCTCCGCATCTA +
Preference number: 4 (lower is better)
Translates to: QPFIGSGTHEVQLVPGTVPPPPG*LPSPHL
Trigger: TAGATGCGGAGAAGGGAGGCAGCCTGGTGGTGGGGG...TACAGTGCCCGGCACGAGCTGAACCTCATGTGTTCCACTCCCAATAAAAGGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR GCA 90 bp CAACCTTTTATTGGGAGTGGAACACATGAGGTTCAGCTCGTGCCGGGCACTGTAGAGAAGGGGCTGCTCTaGGGCTGTGTCTCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: QPFIGSGTHEVQLVPGTVEKGLL*GCVSRV
Trigger: GACCCTGGAGACACAGCCGCAGAGCAGCCCCTTCTC...TACAGTGCCCGGCACGAGCTGAACCTCATGTGTTCCACTCCCAATAAAAGGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR GCA 90 bp CGTCACTCAAGCAGCACAGCCACAAATAGTTTACAGCAGCTCATGCCCGGCATCGTCCCAGAGCCAGTGTaGAGAAAGTGCCAGCACGGC +
Preference number: 4 (lower is better)
Translates to: RHSSSTATNSLQQLMPGIVPEPV*RKCQHG
Trigger: GCCGTGCTGGCACTTTCTGCACACTGGCTCTGGGAC...GATGCCGGGCATGAGCTGCTGTAAACTATTTGTGGCTGTGCTGCTTGAGTGACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR GCA 90 bp CAACCTTTTATTGGGAGTGGAACACATGAGGTTCAGCTCGTGCCGGGCACTGTACGCCTCCCAGACTCTTaGAGGAAGGGGAGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: QPFIGSGTHEVQLVPGTVRLPDS*RKGSSA
Trigger: GGCAGAGCTCCCCTTCCTGCAAGAGTCTGGGAGGCG...TACAGTGCCCGGCACGAGCTGAACCTCATGTGTTCCACTCCCAATAAAAGGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR GCA 90 bp CTTGCTGAACAGAATGACATGGGGACTTGCAGCTCACTCGAGGTTATGTGCCCAGCAGCCAGGACAGCCTaGACCGCCTCCCAGACTCTT +
Preference number: 4 (lower is better)
Translates to: LAEQNDMGTCSSLEVMCPAARTA*TASQTL
Trigger: AAGAGTCTGGGAGGCGGTGCAGGCTGTCCTGGCTGC...TGGGCACATAACCTCGAGTGAGCTGCAAGTCCCCATGTCATTCTGTTCAGCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376652.9
CDS-3UTR GCA 90 bp CCCAAGGAAGAGGCAAACACACTCAAGTCCAGAGTTCCCAGTGGTGCCGCCCAGATGAGGTTCAGCTCGTaGCGGGCACTGTACATTCAC +
Preference number: 4 (lower is better)
Translates to: PKEEANTLKSRVPSGAAQMRFSS*RALYIH
Trigger: GTGAATGTACAGTGCCCGGCACGAGCTGAACCTCAT...CTGGGCGGCACCACTGGGAACTCTGGACTTGAGTGTGTTTGCCTCTTCCTTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR GCA 90 bp GTGCAGAAAGTGCCAGCACGGCCTGTGCTGTGGCTCCTCAGGATGAAGTCACGTATGAGGTTCAGCTCGTaGCGGGCACTGTACATTCAC +
Preference number: 4 (lower is better)
Translates to: VQKVPARPVLWLLRMKSRMRFSS*RALYIH
Trigger: GTGAATGTACAGTGCCCGGCACGAGCTGAACCTCAT...ACGTGACTTCATCCTGAGGAGCCACAGCACAGGCCGTGCTGGCACTTTCTGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CCA 90 bp CAACCTTTTATTGGGAGTGGAACACATGAGGTTCAGCTCGTGCCGGGCACTGTAGGGGGCCGGGTGAACTaGAAGACGTGTACTCGGGTG +
Preference number: 4 (lower is better)
Translates to: QPFIGSGTHEVQLVPGTVGGRVN*KTCTRV
Trigger: CACCCGAGTACACGTCTTCCAGTTCACCCGGCCCCC...TACAGTGCCCGGCACGAGCTGAACCTCATGTGTTCCACTCCCAATAAAAGGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000433259.6
CDS-3UTR CCA 90 bp GAGCAGGGCCCAGGTCCAGACAGCCCTCTGGCCAGATGTGACTGGAAGAGGCTGGCTTTGAAGGTTTCGTaGGTTAACGTGGGAGTTTCT +
Preference number: 4 (lower is better)
Translates to: EQGPGPDSPLARCDWKRLALKVS*VNVGVS
Trigger: AGAAACTCCCACGTTAACCCACGAAACCTTCAAAGC...CAGCCTCTTCCAGTCACATCTGGCCAGAGGGCTGTCTGGACCTGGGCCCTGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000433259.6
CDS-3UTR CCA 90 bp GTGCAGAAAGTGCCAGCACGGCCTGTGCTGTGGCTCCTCAGGATGAAGTCACGTCGATGTAATGAAAAATaGCCCCCAGAGCCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: VQKVPARPVLWLLRMKSRRCNEK*PPEPSW
Trigger: CCAGCTGGGCTCTGGGGGCCATTTTTCATTACATCG...ACGTGACTTCATCCTGAGGAGCCACAGCACAGGCCGTGCTGGCACTTTCTGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CCA 90 bp ACAGCTCACAGTAGCGATACATTCACAGGACACAGTTGGTGTCCAGAAAAGGGGGTCCCGGGGGTGTTATaGCTGTCCCTCGGCTTCCCC +
Preference number: 4 (lower is better)
Translates to: TAHSSDTFTGHSWCPEKGVPGVL*LSLGFP
Trigger: GGGGAAGCCGAGGGACAGCCATAACACCCCCGGGAC...CCCCTTTTCTGGACACCAACTGTGTCCTGTGAATGTATCGCTACTGTGAGCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CCA 90 bp CACCTGCCGTCTATGAGGAGGTGTCTCCCTCCATCATTAACCCCAAACCACACAGTCCAGAGTTCCCAGTaGTGCCGCCCAGACCTACTG +
Preference number: 4 (lower is better)
Translates to: HLPSMRRCLPPSLTPNHTVQSSQ*CRPDLL
Trigger: CAGTAGGTCTGGGCGGCACCACTGGGAACTCTGGAC...TGTGTGGTTTGGGGTTAATGATGGAGGGAGACACCTCCTCATAGACGGCAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CCA 90 bp AGGCAAACACACTCAAGTCCAGAGTTCCCAGTGGTGCCGCCCAGACCTACTGTCAGACTCCCTGAAAGGTaGGCACCTGCCGTCTATGAG +
Preference number: 4 (lower is better)
Translates to: RQTHSSPEFPVVPPRPTVRLPER*APAVYE
Trigger: CTCATAGACGGCAGGTGCCCACCTTTCAGGGAGTCT...GACAGTAGGTCTGGGCGGCACCACTGGGAACTCTGGACTTGAGTGTGTTTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CCA 90 bp CTACACAAGCACTTGGCACCCACACGACAGAGACGTCACTCAAGCAGCACAGCCAGACTCCCTGAAAGGTaGGCACCTGCCGTCTATGAG +
Preference number: 4 (lower is better)
Translates to: LHKHLAPTRQRRHSSSTARLPER*APAVYE
Trigger: CTCATAGACGGCAGGTGCCCACCTTTCAGGGAGTCT...GGCTGTGCTGCTTGAGTGACGTCTCTGTCGTGTGGGTGCCAAGTGCTTGTGTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CCA 90 bp AGGACTGGAAATACGCCACCCCCTTTGGCAGCTTTTCTAAGGTTTAGTAAACAGGGGGTCAGCCCGAGGTaGGCGGATGGTGGCCCGAGA +
Preference number: 4 (lower is better)
Translates to: RTGNTPPPLAAFLRFSKQGVSPR*ADGGPR
Trigger: TCTCGGGCCACCATCCGCCCACCTCGGGCTGACCCC...CTGTTTACTAAACCTTAGAAAAGCTGCCAAAGGGGGTGGCGTATTTCCAGTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000376652.9
CDS-3UTR CCA 90 bp CCCAAGGAAGAGGCAAACACACTCAAGTCCAGAGTTCCCAGTGGTGCCGCCCAGGGCATGCGACACCTTTaGGACGCTTCCAGACCAAAA +
Preference number: 4 (lower is better)
Translates to: PKEEANTLKSRVPSGAAQGMRHL*DASRPK
Trigger: TTTTGGTCTGGAAGCGTCCCAAAGGTGTCGCATGCC...CTGGGCGGCACCACTGGGAACTCTGGACTTGAGTGTGTTTGCCTCTTCCTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376652.9
CDS-3UTR CCA 90 bp GGATCTCAGGTGCCAGGTGGGCAAATGCTACTGTCGCTCAACGAGAGGAATCCCACTGAGGCAGCTCAGTaGGCAGCAATGGGTGCTAAG +
Preference number: 4 (lower is better)
Translates to: GSQVPGGQMLLSLNERNPTEAAQ*AAMGAK
Trigger: CTTAGCACCCATTGCTGCCCACTGAGCTGCCTCAGT...GGGATTCCTCTCGTTGAGCGACAGTAGCATTTGCCCACCTGGCACCTGAGATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376652.9
CDS-3UTR CCA 90 bp CGTCCAGGACAGGAGGGTTTATGCAGACACACAGACACTGCTGACGGGGACAGGGGATTGAAGGCAACGTaGCAACGTCTGCTTATGCCC +
Preference number: 4 (lower is better)
Translates to: RPGQEGLCRHTDTADGDRGLKAT*QRLLMP
Trigger: GGGCATAAGCAGACGTTGCCACGTTGCCTTCAATCC...CCTGTCCCCGTCAGCAGTGTCTGTGTGTCTGCATAAACCCTCCTGTCCTGGACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376652.9
CDS-3UTR CCA 90 bp GATCTCAGGTGCCAGGTGGGCAAATGCTACTGTCGCTCAACGAGAGGAATCCCAGTAGCTGTTAGGACATaGGGGAGGCCAGCACCGATG +
Preference number: 4 (lower is better)
Translates to: DLRCQVGKCYCRSTRGIPVAVRT*GRPAPM
Trigger: CATCGGTGCTGGCCTCCCCCATGTCCTAACAGCTAC...TGGGATTCCTCTCGTTGAGCGACAGTAGCATTTGCCCACCTGGCACCTGAGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376652.9
3UTR CAA 72 bp TGGGCTGGTCTGCAGTTTCCCTGGCATGCGACACCTTaGGGACGCTTCCAGACCAAAACCAGATCCTTGCTG +
Preference number: 4 (lower is better)
Translates to: WAGLQFPWHATP*GRFQTKTRSLL
Trigger: CAGCAAGGATCTGGTTTTGGTCTGGAAGCGTCCCAAAGGTGTCGCATGCCAGGGAAACTGCAGACCAGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376652.9
CDS-3UTR TCA 90 bp CGTCCAGGACAGGAGGGTTTATGCAGACACACAGACACTGCTGACGGGGACAGGAGTTCCCGGATTCCCTaGGCGCTCTTTTCAACATCA +
Preference number: 4 (lower is better)
Translates to: RPGQEGLCRHTDTADGDRSSRIP*ALFSTS
Trigger: TGATGTTGAAAAGAGCGCTCAGGGAATCCGGGAACT...CCTGTCCCCGTCAGCAGTGTCTGTGTGTCTGCATAAACCCTCCTGTCCTGGACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000433259.6
CDS-3UTR TCA 90 bp ACAAATAGTTTACAGCAGCTCATGCCCGGCATCCGCCCATGCTGGGAGACTCCCCTGAAACCCTGTACGTaGCTTCTGCGTGTTCCCACT +
Preference number: 4 (lower is better)
Translates to: TNSLQQLMPGIRPCWETPLKPCT*LLRVPT
Trigger: AGTGGGAACACGCAGAAGTCACGTACAGGGTTTCAG...GGGAGTCTCCCAGCATGGGCGGATGCCGGGCATGAGCTGCTGTAAACTATTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
CDS-3UTR TCA 90 bp ACAAATAGTTTACAGCAGCTCATGCCCGGCATCCGCCCATGCTGGGAGACTCCCGTTTTGAAGGACCTCTaGCACTCTGGCAGCACACAG +
Preference number: 4 (lower is better)
Translates to: TNSLQQLMPGIRPCWETPVLKDL*HSGSTQ
Trigger: CTGTGTGCTGCCAGAGTGTCAGAGGTCCTTCAAAAC...GGGAGTCTCCCAGCATGGGCGGATGCCGGGCATGAGCTGCTGTAAACTATTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR TCA 90 bp ACAGCTCACAGTAGCGATACATTCACAGGACACAGTTGGTGTCCAGAAAAGGGGGGTGAGGTCCATGCATaGGAAGGGGCTGCTCTGCGG +
Preference number: 4 (lower is better)
Translates to: TAHSSDTFTGHSWCPEKGGEVHA*EGAALR
Trigger: CCGCAGAGCAGCCCCTTCTCATGCATGGACCTCACC...CCCCTTTTCTGGACACCAACTGTGTCCTGTGAATGTATCGCTACTGTGAGCTGT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR TCA 90 bp GTGCCGGGCACTGTACATTCACTGAAGCAGCTCAAGGGGCTCAGCCCCGACACTTGTCAATTTTCCGAGTaGGCTTCAGCACTTTGCTCC +
Preference number: 4 (lower is better)
Translates to: VPGTVHSLKQLKGLSPDTCQFSE*ASALCS
Trigger: GGAGCAAAGTGCTGAAGCTCACTCGGAAAATTGACA...AGTGTCGGGGCTGAGCCCCTTGAGCTGCTTCAGTGAATGTACAGTGCCCGGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR TCA 90 bp GTGCTGTGGCTCCTCAGGATGAAGTCACGTCCAGGACAGGAGGGTTTATGCAGAATGGCTCGGCCACTATaGGGCTGGACTCTTCTGTCT +
Preference number: 4 (lower is better)
Translates to: VLWLLRMKSRPGQEGLCRMARPL*GWTLLS
Trigger: AGACAGAAGAGTCCAGCCTCATAGTGGCCGAGCCAT...TCTGCATAAACCCTCCTGTCCTGGACGTGACTTCATCCTGAGGAGCCACAGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR TCA 90 bp TCTTCTGTCTGTTCAGGGAGTCGATGTAATGAAAAATGGCCCCCAGAGCCCAGCCCCTGGGGAGGAAACTaGCAGGCTGGGAGACAAGAC +
Preference number: 4 (lower is better)
Translates to: SSVCSGSRCNEKWPPEPSPWGGN*QAGRQD
Trigger: GTCTTGTCTCCCAGCCTGTCAGTTTCCTCCCCAGGG...GCTGGGCTCTGGGGGCCATTTTTCATTACATCGACTCCCTGAACAGACAGAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000376666.3
ENST00000433259.6
CDS-3UTR TCA 90 bp AACACAGTTTCTACACAAGCACTTGGCACCCACACGACAGAGACGTCACTCAAGTGCTGGGAGACTCCCTaGAAGGTGGGCACCTGCCGT +
Preference number: 4 (lower is better)
Translates to: NTVSTQALGTHTTETSLKCWETP*KVGTCR
Trigger: ACGGCAGGTGCCCACCTTTCAGGGAGTCTCCCAGCA...CTTGAGTGACGTCTCTGTCGTGTGGGTGCCAAGTGCTTGTGTAGAAACTGTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR TCA 90 bp AGGCAAACACACTCAAGTCCAGAGTTCCCAGTGGTGCCGCCCAGACCTACTGTCGCACTGTACATTCACTaGAGCAGCTCAAGGGGCTCA +
Preference number: 4 (lower is better)
Translates to: RQTHSSPEFPVVPPRPTVALYIH*SSSRGS
Trigger: TGAGCCCCTTGAGCTGCTTCAGTGAATGTACAGTGC...GACAGTAGGTCTGGGCGGCACCACTGGGAACTCTGGACTTGAGTGTGTTTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR TCA 90 bp CAACCTTTTATTGGGAGTGGAACACATGAGGTTCAGCTCGTGCCGGGCACTGTATGGGAGTGGAACACATaGGGTTCAGCTCGTGCCGGG +
Preference number: 4 (lower is better)
Translates to: QPFIGSGTHEVQLVPGTVWEWNT*GSARAG
Trigger: CCCGGCACGAGCTGAACCTCATGTGTTCCACTCCCA...TACAGTGCCCGGCACGAGCTGAACCTCATGTGTTCCACTCCCAATAAAAGGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR TCA 90 bp TCTTCTGTCTGTTCAGGGAGTCGATGTAATGAAAAATGGCCCCCAGAGCCCAGCTGGGAGTGGAACACATaGGGTTCAGCTCGTGCCGGG +
Preference number: 4 (lower is better)
Translates to: SSVCSGSRCNEKWPPEPSWEWNT*GSARAG
Trigger: CCCGGCACGAGCTGAACCTCATGTGTTCCACTCCCA...GCTGGGCTCTGGGGGCCATTTTTCATTACATCGACTCCCTGAACAGACAGAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000376666.3
ENST00000433259.6
CDS-3UTR TCA 90 bp CAACCTTTTATTGGGAGTGGAACACATGAGGTTCAGCTCGTGCCGGGCACTGTAGGCATGTGGGGCGTGTaGGACCTGTCTGAGCTTGTC +
Preference number: 4 (lower is better)
Translates to: QPFIGSGTHEVQLVPGTVGMWGV*DLSELV
Trigger: GACAAGCTCAGACAGGTCTCACACGCCCCACATGCC...TACAGTGCCCGGCACGAGCTGAACCTCATGTGTTCCACTCCCAATAAAAGGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376652.9
CDS-3UTR TCA 90 bp TTCATACCCAAGGAAGAGGCAAACACACTCAAGTCCAGAGTTCCCAGTGGTGCCCCTTCACGCTCCAGGTaGCTCCCACCGTACTTGGCT +
Preference number: 4 (lower is better)
Translates to: FIPKEEANTLKSRVPSGAPSRSR*LPPYLA
Trigger: AGCCAAGTACGGTGGGAGTCACCTGGAGCGTGAAGG...GGCACCACTGGGAACTCTGGACTTGAGTGTGTTTGCCTCTTCCTTGGGTATGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376666.3
ENST00000433259.6
CDS-3UTR TCA 90 bp CTTCTGTCTGTTCAGGGAGTCGATGTAATGAAAAATGGCCCCCAGAGCCCAGCTCCGACACACTGGGGATaGGACACGTCCCTTCACGCT +
Preference number: 4 (lower is better)
Translates to: LLSVQGVDVMKNGPQSPAPTHWG*DTSLHA
Trigger: AGCGTGAAGGGACGTGTCTCATCCCCAGTGTGTCGG...AGCTGGGCTCTGGGGGCCATTTTTCATTACATCGACTCCCTGAACAGACAGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000376666.3
ENST00000433259.6
CDS-3UTR GCA 90 bp CGTCACTCAAGCAGCACAGCCACAAATAGTTTACAGCAGCTCATGCCCGGCATCCCAGCATGCCCACGCTaGTCCCTCCTGGAGTTTTCA +
Preference number: 4 (lower is better)
Translates to: RHSSSTATNSLQQLMPGIPACPR*SLLEFS
Trigger: TGAAAACTCCAGGAGGGAGCAGCGTGGGCATGCTGG...GATGCCGGGCATGAGCTGCTGTAAACTATTTGTGGCTGTGCTGCTTGAGTGACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR GCA 90 bp AGAGAAGGAGAAGCCCCTGTCAACCTTTTATTGGGAGTGGAACACATGAGGTTCCGCCCAAGTCCAGCATaGCCACGCTGCTCCCTCCTG +
Preference number: 4 (lower is better)
Translates to: REGEAPVNLLLGVEHMRFRPSPA*PRCSLL
Trigger: CAGGAGGGAGCAGCGTGGGCATGCTGGACTTGGGCG...GAACCTCATGTGTTCCACTCCCAATAAAAGGTTGACAGGGGCTTCTCCTTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR GCA 90 bp CTGAAACTCACTGCCCTGGGATCCTGCCATCCAAACACGGGGACTGCAGGACTGCCTGTACGTGACTTCTaGGTGTTCCCACTCTCCTTT +
Preference number: 4 (lower is better)
Translates to: LKLTALGSCHPNTGTAGLPVRDF*VFPLSF
Trigger: AAAGGAGAGTGGGAACACGCAGAAGTCACGTACAGG...CAGTCCTGCAGTCCCCGTGTTTGGATGGCAGGATCCCAGGGCAGTGAGTTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376652.9
CDS-3UTR GCA 90 bp AGGAGAAGCCCCTGTCAACCTTTTATTGGGAGTGGAACACATGAGGTTCAGCTCCCCCCACCACCAGGCTaGCTCCCTTCTCCGCATCTA +
Preference number: 4 (lower is better)
Translates to: RRSPCQPFIGSGTHEVQLPPPPG*LPSPHL
Trigger: TAGATGCGGAGAAGGGAGGCAGCCTGGTGGTGGGGG...GAGCTGAACCTCATGTGTTCCACTCCCAATAAAAGGTTGACAGGGGCTTCTCCT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR GCA 90 bp GTAGCGATACATTCACAGGACACAGTTGGTGTCCAGAAAAGGGGGCTCAGAACACCCCCACCACCAGGCTaGCTCCCTTCTCCGCATCTA +
Preference number: 4 (lower is better)
Translates to: VAIHSQDTVGVQKRGLRTPPPPG*LPSPHL
Trigger: TAGATGCGGAGAAGGGAGGCAGCCTGGTGGTGGGGG...TGTTCTGAGCCCCCTTTTCTGGACACCAACTGTGTCCTGTGAATGTATCGCTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR GCA 90 bp GCCCCTGTCAACCTTTTATTGGGAGTGGAACACATGAGGTTCAGCTCGTGCCGGACACACGTACTTGGCTaGGATCTCGAAGTCCCCCAC +
Preference number: 4 (lower is better)
Translates to: APVNLLLGVEHMRFSSCRTHVLG*DLEVPH
Trigger: GTGGGGGACTTCGAGATCGCAGCCAAGTACGTGTGT...CCGGCACGAGCTGAACCTCATGTGTTCCACTCCCAATAAAAGGTTGACAGGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
CDS-3UTR GCA 90 bp TCAGAACACAGTTTCTACACAAGCACTTGGCACCCACACGACAGAGACGTCACTGAGAAGGGGCTGCTCTaGGGCTGTGTCTCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: SEHSFYTSTWHPHDRDVTEKGLL*GCVSRV
Trigger: GACCCTGGAGACACAGCCGCAGAGCAGCCCCTTCTC...AGTGACGTCTCTGTCGTGTGGGTGCCAAGTGCTTGTGTAGAAACTGTGTTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR GCA 90 bp CAACCTTTTATTGGGAGTGGAACACATGAGGTTCAGCTCGTGCCGGGCACTGTAGTTCTGTCCTGGTCCTaGCCACTTGGAGCCCAGGCA +
Preference number: 4 (lower is better)
Translates to: QPFIGSGTHEVQLVPGTVVLSWS*PLGAQA
Trigger: TGCCTGGGCTCCAAGTGGGCAGGACCAGGACAGAAC...TACAGTGCCCGGCACGAGCTGAACCTCATGTGTTCCACTCCCAATAAAAGGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR GCA 90 bp CTTCTGTCTGTTCAGGGAGTCGATGTAATGAAAAATGGCCCCCAGAGCCCAGCTCAGGAAGGGGAGCTCTaGCCTGGGGAGGAAACTGAC +
Preference number: 4 (lower is better)
Translates to: LLSVQGVDVMKNGPQSPAQEGEL*PGEETD
Trigger: GTCAGTTTCCTCCCCAGGGCAGAGCTCCCCTTCCTG...AGCTGGGCTCTGGGGGCCATTTTTCATTACATCGACTCCCTGAACAGACAGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000376666.3
ENST00000433259.6
CDS-3UTR GCA 90 bp TTAACCCCAAACCACACAATGTGTGAGGAGAGCAGGCCTCTGGGTGAACTCACACAGAGTTCCCAGTGGTaGCGCCCAGACCTACTGTCC +
Preference number: 4 (lower is better)
Translates to: LTPNHTMCEESRPLGELTQSSQW*RPDLLS
Trigger: GGACAGTAGGTCTGGGCGGCACCACTGGGAACTCTG...TGTGAGTTCACCCAGAGGCCTGCTCTCCTCACACATTGTGTGGTTTGGGGTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR GCA 90 bp ACAAATAGTTTACAGCAGCTCATGCCCGGCATCCGCCCATGCTGGGAGACTCCCAACAGGGATCTCAGGTaGCAGGTGGGCAAATGCTAC +
Preference number: 4 (lower is better)
Translates to: TNSLQQLMPGIRPCWETPNRDLR*QVGKCY
Trigger: GTAGCATTTGCCCACCTGGCACCTGAGATCCCTGTT...GGGAGTCTCCCAGCATGGGCGGATGCCGGGCATGAGCTGCTGTAAACTATTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376652.9
CDS-3UTR GCA 90 bp GGTGGCATTGAGCAGGGCCCAGGTCCAGACAGCCCTCTGGCCAGATGTGACTGGCAAGCAACCCTAGTTTaGTTCTTTTACGATGTGCAC +
Preference number: 4 (lower is better)
Translates to: GGIEQGPGPDSPLARCDWQATLV*FFYDVH
Trigger: GTGCACATCGTAAAAGAAGCAAACTAGGGTTGCTTG...CCAGTCACATCTGGCCAGAGGGCTGTCTGGACCTGGGCCCTGCTCAATGCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376652.9
CDS-3UTR GCA 90 bp GTGCAGAAAGTGCCAGCACGGCCTGTGCTGTGGCTCCTCAGGATGAAGTCACGTCAACGTGGCAACGTCTaGTTATGCCCTGAAACTCAC +
Preference number: 4 (lower is better)
Translates to: VQKVPARPVLWLLRMKSRQRGNV*LCPETH
Trigger: GTGAGTTTCAGGGCATAAGCAGACGTTGCCACGTTG...ACGTGACTTCATCCTGAGGAGCCACAGCACAGGCCGTGCTGGCACTTTCTGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376652.9
CDS-3UTR CCA 90 bp GCTCGTGCCGGGCACTGTACATTCACTGAAGCAGCTCAAGGGGCTCAGCCCCGAATAGGCAGAAAGACCTaGCTTCAGTGCTTTGAAGGT +
Preference number: 4 (lower is better)
Translates to: ARAGHCTFTEAAQGAQPRIGRKT*LQCFEG
Trigger: ACCTTCAAAGCACTGAAGCCAGGTCTTTCTGCCTAT...TCGGGGCTGAGCCCCTTGAGCTGCTTCAGTGAATGTACAGTGCCCGGCACGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000433259.6
CDS-3UTR CCA 90 bp ACTCAAGTCCAGAGTTCCCAGTGGTGCCGCCCAGACCTACTGTCCCGGGGGTGTTTCTGCAGTAACTTCTaGGCCTTTTCTCCAGGTAAC +
Preference number: 4 (lower is better)
Translates to: TQVQSSQWCRPDLLSRGCFCSNF*AFSPGN
Trigger: GTTACCTGGAGAAAAGGCCCAGAAGTTACTGCAGAA...ACACCCCCGGGACAGTAGGTCTGGGCGGCACCACTGGGAACTCTGGACTTGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CCA 90 bp TGGCTCCTCAGGATGAAGTCACGTCCAGGACAGGAGGGTTTATGCAGACACACAGGAAGGCGATCTGAGTaGATCCTCCGCCCAAGTCCA +
Preference number: 4 (lower is better)
Translates to: WLLRMKSRPGQEGLCRHTGRRSE*ILRPSP
Trigger: TGGACTTGGGCGGAGGATCCACTCAGATCGCCTTCC...TGTGTGTCTGCATAAACCCTCCTGTCCTGGACGTGACTTCATCCTGAGGAGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CCA 90 bp TCAGAACACAGTTTCTACACAAGCACTTGGCACCCACACGACAGAGACGTCACTGGTGCCCTCCACGCGTaGCAGGAAGGCGATCTGAGT +
Preference number: 4 (lower is better)
Translates to: SEHSFYTSTWHPHDRDVTGALHA*QEGDLS
Trigger: ACTCAGATCGCCTTCCTGCCACGCGTGGAGGGCACC...AGTGACGTCTCTGTCGTGTGGGTGCCAAGTGCTTGTGTAGAAACTGTGTTCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CCA 90 bp ACAGCTCACAGTAGCGATACATTCACAGGACACAGTTGGTGTCCAGAAAAGGGGGGTGCCCTCCACGCGTaGCAGGAAGGCGATCTGAGT +
Preference number: 4 (lower is better)
Translates to: TAHSSDTFTGHSWCPEKGGALHA*QEGDLS
Trigger: ACTCAGATCGCCTTCCTGCCACGCGTGGAGGGCACC...CCCCTTTTCTGGACACCAACTGTGTCCTGTGAATGTATCGCTACTGTGAGCTGT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CCA 90 bp GTGCAGAAAGTGCCAGCACGGCCTGTGCTGTGGCTCCTCAGGATGAAGTCACGTCCCCCAGAGCCCAGCTaGTCTCAACATTGTCAATTT +
Preference number: 4 (lower is better)
Translates to: VQKVPARPVLWLLRMKSRPPEPS*SQHCQF
Trigger: AAATTGACAATGTTGAGACCAGCTGGGCTCTGGGGG...ACGTGACTTCATCCTGAGGAGCCACAGCACAGGCCGTGCTGGCACTTTCTGCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CCA 90 bp CACCTGCCGTCTATGAGGAGGTGTCTCCCTCCATCATTAACCCCAAACCACACACTGGCCAGATGTGACTaGAAGAGGCTGATGCCAGGG +
Preference number: 4 (lower is better)
Translates to: HLPSMRRCLPPSLTPNHTLARCD*KRLMPG
Trigger: CCCTGGCATCAGCCTCTTCCAGTCACATCTGGCCAG...TGTGTGGTTTGGGGTTAATGATGGAGGGAGACACCTCCTCATAGACGGCAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CCA 90 bp TTAACCCCAAACCACACAATGTGTGAGGAGAGCAGGCCTCTGGGTGAACTCACAGTCCAGAGTTCCCAGTaGTGCCGCCCAGACCTACTG +
Preference number: 4 (lower is better)
Translates to: LTPNHTMCEESRPLGELTVQSSQ*CRPDLL
Trigger: CAGTAGGTCTGGGCGGCACCACTGGGAACTCTGGAC...TGTGAGTTCACCCAGAGGCCTGCTCTCCTCACACATTGTGTGGTTTGGGGTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CCA 90 bp AACTCACACATTCATACCCAAGGAAGAGGCAAACACACTCAAGTCCAGAGTTCCCCCGAGGTGGGCGGATaGTGGCCCGAGACACCGAGA +
Preference number: 4 (lower is better)
Translates to: NSHIHTQGRGKHTQVQSSPEVGG*WPETPR
Trigger: TCTCGGTGTCTCGGGCCACCATCCGCCCACCTCGGG...GGAACTCTGGACTTGAGTGTGTTTGCCTCTTCCTTGGGTATGAATGTGTGAGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CCA 90 bp CTACACAAGCACTTGGCACCCACACGACAGAGACGTCACTCAAGCAGCACAGCCATCTCAGGTGCCAGGTaGGCAAATGCTACTGTCGCT +
Preference number: 4 (lower is better)
Translates to: LHKHLAPTRQRRHSSSTAISGAR*ANATVA
Trigger: AGCGACAGTAGCATTTGCCCACCTGGCACCTGAGAT...GGCTGTGCTGCTTGAGTGACGTCTCTGTCGTGTGGGTGCCAAGTGCTTGTGTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376652.9
CDS-3UTR CCA 90 bp AACTCACACATTCATACCCAAGGAAGAGGCAAACACACTCAAGTCCAGAGTTCCCACCTGGCCGTGCTGTaGGCTGCTGGCCTGGCACAG +
Preference number: 4 (lower is better)
Translates to: NSHIHTQGRGKHTQVQSSHLAVL*AAGLAQ
Trigger: CTGTGCCAGGCCAGCAGCCCACAGCACGGCCAGGTG...GGAACTCTGGACTTGAGTGTGTTTGCCTCTTCCTTGGGTATGAATGTGTGAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376652.9
CDS-3UTR TCA 90 bp ACAAATAGTTTACAGCAGCTCATGCCCGGCATCCGCCCATGCTGGGAGACTCCCGTTCCCACTCTCCTTTaGAACTGGGAGACAAGCAAG +
Preference number: 4 (lower is better)
Translates to: TNSLQQLMPGIRPCWETPVPTLL*NWETSK
Trigger: CTTGCTTGTCTCCCAGTTTCAAAGGAGAGTGGGAAC...GGGAGTCTCCCAGCATGGGCGGATGCCGGGCATGAGCTGCTGTAAACTATTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
CDS-3UTR TCA 90 bp CACCTGCCGTCTATGAGGAGGTGTCTCCCTCCATCATTAACCCCAAACCACACAATGGCTCGGCCACTATaGGGCTGGACTCTTCTGTCT +
Preference number: 4 (lower is better)
Translates to: HLPSMRRCLPPSLTPNHTMARPL*GWTLLS
Trigger: AGACAGAAGAGTCCAGCCTCATAGTGGCCGAGCCAT...TGTGTGGTTTGGGGTTAATGATGGAGGGAGACACCTCCTCATAGACGGCAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR TCA 90 bp TTCATACCCAAGGAAGAGGCAAACACACTCAAGTCCAGAGTTCCCAGTGGTGCCTGTGGCTCCTCAGGATaGAGTCACGTCCAGGACAGG +
Preference number: 4 (lower is better)
Translates to: FIPKEEANTLKSRVPSGACGSSG*SHVQDR
Trigger: CCTGTCCTGGACGTGACTTCATCCTGAGGAGCCACA...GGCACCACTGGGAACTCTGGACTTGAGTGTGTTTGCCTCTTCCTTGGGTATGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR TCA 90 bp TCAGAACACAGTTTCTACACAAGCACTTGGCACCCACACGACAGAGACGTCACTCCCTCTGGCCAGATGTaGCTGGAAGAGGCTGATGCC +
Preference number: 4 (lower is better)
Translates to: SEHSFYTSTWHPHDRDVTPSGQM*LEEADA
Trigger: GGCATCAGCCTCTTCCAGTCACATCTGGCCAGAGGG...AGTGACGTCTCTGTCGTGTGGGTGCCAAGTGCTTGTGTAGAAACTGTGTTCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR TCA 90 bp CGTCACTCAAGCAGCACAGCCACAAATAGTTTACAGCAGCTCATGCCCGGCATCGAGCAGGCCTCTGGGTaGACTCACACATTCATACCC +
Preference number: 4 (lower is better)
Translates to: RHSSSTATNSLQQLMPGIEQASG*THTFIP
Trigger: GGGTATGAATGTGTGAGTTCACCCAGAGGCCTGCTC...GATGCCGGGCATGAGCTGCTGTAAACTATTTGTGGCTGTGCTGCTTGAGTGACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR TCA 90 bp ACAGCTCACAGTAGCGATACATTCACAGGACACAGTTGGTGTCCAGAAAAGGGGTGGGAGTGGAACACATaGGGTTCAGCTCGTGCCGGG +
Preference number: 4 (lower is better)
Translates to: TAHSSDTFTGHSWCPEKGWEWNT*GSARAG
Trigger: CCCGGCACGAGCTGAACCTCATGTGTTCCACTCCCA...CCCCTTTTCTGGACACCAACTGTGTCCTGTGAATGTATCGCTACTGTGAGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR TCA 90 bp GACTTGCAGCTCACTCGAGGTTATGTGCCCAGGCCTCACCTGGCCGTGCTGTGGAATCGGCAAGGGATATaGACAGATGTTTCACGGAAA +
Preference number: 4 (lower is better)
Translates to: DLQLTRGYVPRPHLAVLWNRQGI*TDVSRK
Trigger: TTTCCGTGAAACATCTGTTCATATCCCTTGCCGATT...CCACAGCACGGCCAGGTGAGGCCTGGGCACATAACCTCGAGTGAGCTGCAAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376652.9
CDS-3UTR GCA 90 bp CACCTGCCGTCTATGAGGAGGTGTCTCCCTCCATCATTAACCCCAAACCACACAACACACGTACTTGGCTaGGATCTCGAAGTCCCCCAC +
Preference number: 4 (lower is better)
Translates to: HLPSMRRCLPPSLTPNHTTHVLG*DLEVPH
Trigger: GTGGGGGACTTCGAGATCGCAGCCAAGTACGTGTGT...TGTGTGGTTTGGGGTTAATGATGGAGGGAGACACCTCCTCATAGACGGCAGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
CDS-3UTR GCA 90 bp TTAACCCCAAACCACACAATGTGTGAGGAGAGCAGGCCTCTGGGTGAACTCACATGCATGAGAAGGGGCTaGTCTGCGGCTGTGTCTCCA +
Preference number: 4 (lower is better)
Translates to: LTPNHTMCEESRPLGELTCMRRG*SAAVSP
Trigger: TGGAGACACAGCCGCAGAGCAGCCCCTTCTCATGCA...TGTGAGTTCACCCAGAGGCCTGCTCTCCTCACACATTGTGTGGTTTGGGGTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR GCA 90 bp AGGAGAAGCCCCTGTCAACCTTTTATTGGGAGTGGAACACATGAGGTTCAGCTCGTCCCAGAGCCAGTGTaGAGAAAGTGCCAGCACGGC +
Preference number: 4 (lower is better)
Translates to: RRSPCQPFIGSGTHEVQLVPEPV*RKCQHG
Trigger: GCCGTGCTGGCACTTTCTGCACACTGGCTCTGGGAC...GAGCTGAACCTCATGTGTTCCACTCCCAATAAAAGGTTGACAGGGGCTTCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR GCA 90 bp GTAGCGATACATTCACAGGACACAGTTGGTGTCCAGAAAAGGGGGCTCAGAACAGTCCCAGAGCCAGTGTaGAGAAAGTGCCAGCACGGC +
Preference number: 4 (lower is better)
Translates to: VAIHSQDTVGVQKRGLRTVPEPV*RKCQHG
Trigger: GCCGTGCTGGCACTTTCTGCACACTGGCTCTGGGAC...TGTTCTGAGCCCCCTTTTCTGGACACCAACTGTGTCCTGTGAATGTATCGCTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR GCA 90 bp TTCATACCCAAGGAAGAGGCAAACACACTCAAGTCCAGAGTTCCCAGTGGTGCCTGCCCCCTCAGTGTGTaGCTGTGGTTCTGTCCTGGT +
Preference number: 4 (lower is better)
Translates to: FIPKEEANTLKSRVPSGACPLSV*LWFCPG
Trigger: ACCAGGACAGAACCACAGGCACACACTGAGGGGGCA...GGCACCACTGGGAACTCTGGACTTGAGTGTGTTTGCCTCTTCCTTGGGTATGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR GCA 90 bp AACTCACACATTCATACCCAAGGAAGAGGCAAACACACTCAAGTCCAGAGTTCCGGCAGGGAGCCACACTaGCCCCTCAGTGTGTGCCTG +
Preference number: 4 (lower is better)
Translates to: NSHIHTQGRGKHTQVQSSGREPH*PLSVCL
Trigger: CAGGCACACACTGAGGGGGCAGTGTGGCTCCCTGCC...GGAACTCTGGACTTGAGTGTGTTTGCCTCTTCCTTGGGTATGAATGTGTGAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR GCA 90 bp AGGAGAAGCCCCTGTCAACCTTTTATTGGGAGTGGAACACATGAGGTTCAGCTCCAGGAAGGGGAGCTCTaGCCTGGGGAGGAAACTGAC +
Preference number: 4 (lower is better)
Translates to: RRSPCQPFIGSGTHEVQLQEGEL*PGEETD
Trigger: GTCAGTTTCCTCCCCAGGGCAGAGCTCCCCTTCCTG...GAGCTGAACCTCATGTGTTCCACTCCCAATAAAAGGTTGACAGGGGCTTCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR GCA 90 bp AACACAGTTTCTACACAAGCACTTGGCACCCACACGACAGAGACGTCACTCAAGCAGGAAGGGGAGCTCTaGCCTGGGGAGGAAACTGAC +
Preference number: 4 (lower is better)
Translates to: NTVSTQALGTHTTETSLKQEGEL*PGEETD
Trigger: GTCAGTTTCCTCCCCAGGGCAGAGCTCCCCTTCCTG...CTTGAGTGACGTCTCTGTCGTGTGGGTGCCAAGTGCTTGTGTAGAAACTGTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR GCA 90 bp TTAACCCCAAACCACACAATGTGTGAGGAGAGCAGGCCTCTGGGTGAACTCACAGTTTACAGCAGCTCATaGCCGGCATCCGCCCATGCT +
Preference number: 4 (lower is better)
Translates to: LTPNHTMCEESRPLGELTVYSSS*PASAHA
Trigger: AGCATGGGCGGATGCCGGGCATGAGCTGCTGTAAAC...TGTGAGTTCACCCAGAGGCCTGCTCTCCTCACACATTGTGTGGTTTGGGGTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CCA 90 bp CGTCCAGGACAGGAGGGTTTATGCAGACACACAGACACTGCTGACGGGGACAGGGCAGGCTCCCGTGGTTaGATATTTTTCTCATCCTTG +
Preference number: 4 (lower is better)
Translates to: RPGQEGLCRHTDTADGDRAGSRG*IFFSSL
Trigger: CAAGGATGAGAAAAATATCCAACCACGGGAGCCTGC...CCTGTCCCCGTCAGCAGTGTCTGTGTGTCTGCATAAACCCTCCTGTCCTGGACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000433259.6
CDS-3UTR CCA 90 bp AACTCACACATTCATACCCAAGGAAGAGGCAAACACACTCAAGTCCAGAGTTCCATGCTGAAGAAGGCCTaGGTGGCGGTGGCCCGGTGC +
Preference number: 4 (lower is better)
Translates to: NSHIHTQGRGKHTQVQSSMLKKA*VAVARC
Trigger: GCACCGGGCCACCGCCACCCAGGCCTTCTTCAGCAT...GGAACTCTGGACTTGAGTGTGTTTGCCTCTTCCTTGGGTATGAATGTGTGAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000433259.6
CDS-3UTR CCA 90 bp GTGCCGGGCACTGTACATTCACTGAAGCAGCTCAAGGGGCTCAGCCCCGACACTATAGGCAGAAAGACCTaGCTTCAGTGCTTTGAAGGT +
Preference number: 4 (lower is better)
Translates to: VPGTVHSLKQLKGLSPDTIGRKT*LQCFEG
Trigger: ACCTTCAAAGCACTGAAGCCAGGTCTTTCTGCCTAT...AGTGTCGGGGCTGAGCCCCTTGAGCTGCTTCAGTGAATGTACAGTGCCCGGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000433259.6
CDS-3UTR CCA 90 bp GTGCCGGGCACTGTACATTCACTGAAGCAGCTCAAGGGGCTCAGCCCCGACACTTTCTGCAGTAACTTCTaGGCCTTTTCTCCAGGTAAC +
Preference number: 4 (lower is better)
Translates to: VPGTVHSLKQLKGLSPDTFCSNF*AFSPGN
Trigger: GTTACCTGGAGAAAAGGCCCAGAAGTTACTGCAGAA...AGTGTCGGGGCTGAGCCCCTTGAGCTGCTTCAGTGAATGTACAGTGCCCGGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CCA 90 bp CGTCACTCAAGCAGCACAGCCACAAATAGTTTACAGCAGCTCATGCCCGGCATCCACGCTGCTCCCTCCTaGAGTTTTCAAGCTGCCTGT +
Preference number: 4 (lower is better)
Translates to: RHSSSTATNSLQQLMPGIHAAPS*SFQAAC
Trigger: ACAGGCAGCTTGAAAACTCCAGGAGGGAGCAGCGTG...GATGCCGGGCATGAGCTGCTGTAAACTATTTGTGGCTGTGCTGCTTGAGTGACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CCA 90 bp TTAACCCCAAACCACACAATGTGTGAGGAGAGCAGGCCTCTGGGTGAACTCACAGGACCTCTGACACTCTaGCAGCACACAGCTCGTGCA +
Preference number: 4 (lower is better)
Translates to: LTPNHTMCEESRPLGELTGPLTL*QHTARA
Trigger: TGCACGAGCTGTGTGCTGCCAGAGTGTCAGAGGTCC...TGTGAGTTCACCCAGAGGCCTGCTCTCCTCACACATTGTGTGGTTTGGGGTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CCA 90 bp CTACACAAGCACTTGGCACCCACACGACAGAGACGTCACTCAAGCAGCACAGCCCCCCCAGAGCCCAGCTaGTCTCAACATTGTCAATTT +
Preference number: 4 (lower is better)
Translates to: LHKHLAPTRQRRHSSSTAPPEPS*SQHCQF
Trigger: AAATTGACAATGTTGAGACCAGCTGGGCTCTGGGGG...GGCTGTGCTGCTTGAGTGACGTCTCTGTCGTGTGGGTGCCAAGTGCTTGTGTAG
54% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CCA 90 bp GTGCTGTGGCTCCTCAGGATGAAGTCACGTCCAGGACAGGAGGGTTTATGCAGACGATGTAATGAAAAATaGCCCCCAGAGCCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: VLWLLRMKSRPGQEGLCRRCNEK*PPEPSW
Trigger: CCAGCTGGGCTCTGGGGGCCATTTTTCATTACATCG...TCTGCATAAACCCTCCTGTCCTGGACGTGACTTCATCCTGAGGAGCCACAGCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CCA 90 bp TTCATACCCAAGGAAGAGGCAAACACACTCAAGTCCAGAGTTCCCAGTGGTGCCCTGGCCAGATGTGACTaGAAGAGGCTGATGCCAGGG +
Preference number: 4 (lower is better)
Translates to: FIPKEEANTLKSRVPSGALARCD*KRLMPG
Trigger: CCCTGGCATCAGCCTCTTCCAGTCACATCTGGCCAG...GGCACCACTGGGAACTCTGGACTTGAGTGTGTTTGCCTCTTCCTTGGGTATGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CCA 90 bp GTTTCTACACAAGCACTTGGCACCCACACGACAGAGACGTCACTCAAGCAGCACGTCCAGACAGCCCTCTaGCCAGATGTGACTGGAAGA +
Preference number: 4 (lower is better)
Translates to: VSTQALGTHTTETSLKQHVQTAL*PDVTGR
Trigger: TCTTCCAGTCACATCTGGCCAGAGGGCTGTCTGGAC...GTGCTGCTTGAGTGACGTCTCTGTCGTGTGGGTGCCAAGTGCTTGTGTAGAAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CCA 90 bp TTCATACCCAAGGAAGAGGCAAACACACTCAAGTCCAGAGTTCCCAGTGGTGCCCCTAAGACATGGCCCTaGCTAGGCGGGAACAGCTCA +
Preference number: 4 (lower is better)
Translates to: FIPKEEANTLKSRVPSGAPKTWP*LGGNSS
Trigger: TGAGCTGTTCCCGCCTAGCCAGGGCCATGTCTTAGG...GGCACCACTGGGAACTCTGGACTTGAGTGTGTTTGCCTCTTCCTTGGGTATGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CCA 90 bp AACTCACACATTCATACCCAAGGAAGAGGCAAACACACTCAAGTCCAGAGTTCCGAGGTGGGCGGATGGTaGCCCGAGACACCGAGAGCT +
Preference number: 4 (lower is better)
Translates to: NSHIHTQGRGKHTQVQSSEVGGW*PETPRA
Trigger: AGCTCTCGGTGTCTCGGGCCACCATCCGCCCACCTC...GGAACTCTGGACTTGAGTGTGTTTGCCTCTTCCTTGGGTATGAATGTGTGAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CCA 90 bp TCATGCCCGGCATCCGCCCATGCTGGGAGACTCCCTGAAAGGTGGGCACCTGCCCCGACCTTCTTTAAATaGACCAAATTGATTTTGGCT +
Preference number: 4 (lower is better)
Translates to: SCPASAHAGRLPERWAPAPTFFK*TKLILA
Trigger: AGCCAAAATCAATTTGGTCCATTTAAAGAAGGTCGG...GGCAGGTGCCCACCTTTCAGGGAGTCTCCCAGCATGGGCGGATGCCGGGCATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376652.9
CDS-3UTR TCA 90 bp TGGCTCCTCAGGATGAAGTCACGTCCAGGACAGGAGGGTTTATGCAGACACACATGTAGGCAACATAGATaGACACGCCCACACACAGCC +
Preference number: 4 (lower is better)
Translates to: WLLRMKSRPGQEGLCRHTCRQHR*TRPHTA
Trigger: GGCTGTGTGTGGGCGTGTTCATCTATGTTGCCTACA...TGTGTGTCTGCATAAACCCTCCTGTCCTGGACGTGACTTCATCCTGAGGAGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000433259.6
CDS-3UTR TCA 90 bp AGGCAAACACACTCAAGTCCAGAGTTCCCAGTGGTGCCGCCCAGACCTACTGTCCATCTGTTCCGTTCATaGTGGAAACACAGTCATCCC +
Preference number: 4 (lower is better)
Translates to: RQTHSSPEFPVVPPRPTVHLFRS*WKHSHP
Trigger: GGGATGACTGTGTTTCCATCATGAACGGAACAGATG...GACAGTAGGTCTGGGCGGCACCACTGGGAACTCTGGACTTGAGTGTGTTTGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR TCA 90 bp GGAGAAGCCCCTGTCAACCTTTTATTGGGAGTGGAACACATGAGGTTCAGCTCGCGCTGCTTTCTGCCCTaGAACCCTGTACGTGACTTC +
Preference number: 4 (lower is better)
Translates to: GEAPVNLLLGVEHMRFSSRCFLP*NPVRDF
Trigger: GAAGTCACGTACAGGGTTTCAGGGCAGAAAGCAGCG...CGAGCTGAACCTCATGTGTTCCACTCCCAATAAAAGGTTGACAGGGGCTTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
CDS-3UTR TCA 90 bp GTAGCGATACATTCACAGGACACAGTTGGTGTCCAGAAAAGGGGGCTCAGAACACCTTCTCCGCATCTATaGGGCCCACACCAGCTGCAA +
Preference number: 4 (lower is better)
Translates to: VAIHSQDTVGVQKRGLRTPSPHL*GPHQLQ
Trigger: TTGCAGCTGGTGTGGGCCTCATAGATGCGGAGAAGG...TGTTCTGAGCCCCCTTTTCTGGACACCAACTGTGTCCTGTGAATGTATCGCTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR TCA 90 bp ACAAATAGTTTACAGCAGCTCATGCCCGGCATCCGCCCATGCTGGGAGACTCCCTGTCAATTTTCCGAGTaGGCTTCAGCACTTTGCTCC +
Preference number: 4 (lower is better)
Translates to: TNSLQQLMPGIRPCWETPCQFSE*ASALCS
Trigger: GGAGCAAAGTGCTGAAGCTCACTCGGAAAATTGACA...GGGAGTCTCCCAGCATGGGCGGATGCCGGGCATGAGCTGCTGTAAACTATTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR TCA 90 bp TTCATACCCAAGGAAGAGGCAAACACACTCAAGTCCAGAGTTCCCAGTGGTGCCAAACCACACAATGTGTaGGGAGAGCAGGCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: FIPKEEANTLKSRVPSGAKPHNV*GEQASG
Trigger: CCCAGAGGCCTGCTCTCCTCACACATTGTGTGGTTT...GGCACCACTGGGAACTCTGGACTTGAGTGTGTTTGCCTCTTCCTTGGGTATGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR GCA 90 bp GATCTCAGGTGCCAGGTGGGCAAATGCTACTGTCGCTCAACGAGAGGAATCCCAGGTGCCAGTGCTTCCTaGATCAAACATGATCCCGTA +
Preference number: 4 (lower is better)
Translates to: DLRCQVGKCYCRSTRGIPGASAS*IKHDPV
Trigger: TACGGGATCATGTTTGATGCAGGAAGCACTGGCACC...TGGGATTCCTCTCGTTGAGCGACAGTAGCATTTGCCCACCTGGCACCTGAGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376652.9
CDS-3UTR GCA 90 bp GTAGCGATACATTCACAGGACACAGTTGGTGTCCAGAAAAGGGGGCTCAGAACAGTTAAACATCCGCAGTaGCGTCAGGTAGCCGGGTGG +
Preference number: 4 (lower is better)
Translates to: VAIHSQDTVGVQKRGLRTVKHPQ*RQVAGW
Trigger: CCACCCGGCTACCTGACGGCACTGCGGATGTTTAAC...TGTTCTGAGCCCCCTTTTCTGGACACCAACTGTGTCCTGTGAATGTATCGCTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR GCA 90 bp TTAACCCCAAACCACACAATGTGTGAGGAGAGCAGGCCTCTGGGTGAACTCACACTTGCCGCTGCTTTCTaGCCTGAAACCCTGTACGTG +
Preference number: 4 (lower is better)
Translates to: LTPNHTMCEESRPLGELTLAAAF*PETLYV
Trigger: CACGTACAGGGTTTCAGGGCAGAAAGCAGCGGCAAG...TGTGAGTTCACCCAGAGGCCTGCTCTCCTCACACATTGTGTGGTTTGGGGTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
CDS-3UTR GCA 90 bp TCAGAACACAGTTTCTACACAAGCACTTGGCACCCACACGACAGAGACGTCACTTGCATGAGAAGGGGCTaGTCTGCGGCTGTGTCTCCA +
Preference number: 4 (lower is better)
Translates to: SEHSFYTSTWHPHDRDVTCMRRG*SAAVSP
Trigger: TGGAGACACAGCCGCAGAGCAGCCCCTTCTCATGCA...AGTGACGTCTCTGTCGTGTGGGTGCCAAGTGCTTGTGTAGAAACTGTGTTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR GCA 90 bp TCAGAACACAGTTTCTACACAAGCACTTGGCACCCACACGACAGAGACGTCACTTGCCCCCTCAGTGTGTaGCTGTGGTTCTGTCCTGGT +
Preference number: 4 (lower is better)
Translates to: SEHSFYTSTWHPHDRDVTCPLSV*LWFCPG
Trigger: ACCAGGACAGAACCACAGGCACACACTGAGGGGGCA...AGTGACGTCTCTGTCGTGTGGGTGCCAAGTGCTTGTGTAGAAACTGTGTTCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR GCA 90 bp AGAGAAGGAGAAGCCCCTGTCAACCTTTTATTGGGAGTGGAACACATGAGGTTCCAGAGTTCCCAGTGGTaGCGCCCAGACCTACTGTCC +
Preference number: 4 (lower is better)
Translates to: REGEAPVNLLLGVEHMRFQSSQW*RPDLLS
Trigger: GGACAGTAGGTCTGGGCGGCACCACTGGGAACTCTG...GAACCTCATGTGTTCCACTCCCAATAAAAGGTTGACAGGGGCTTCTCCTTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CCA 90 bp CGTCCAGGACAGGAGGGTTTATGCAGACACACAGACACTGCTGACGGGGACAGGGCTTTGAAGGTTTCGTaGGTTAACGTGGGAGTTTCT +
Preference number: 4 (lower is better)
Translates to: RPGQEGLCRHTDTADGDRALKVS*VNVGVS
Trigger: AGAAACTCCCACGTTAACCCACGAAACCTTCAAAGC...CCTGTCCCCGTCAGCAGTGTCTGTGTGTCTGCATAAACCCTCCTGTCCTGGACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000433259.6
CDS-3UTR CCA 90 bp AACACAGTTTCTACACAAGCACTTGGCACCCACACGACAGAGACGTCACTCAAGGGACCTCTGACACTCTaGCAGCACACAGCTCGTGCA +
Preference number: 4 (lower is better)
Translates to: NTVSTQALGTHTTETSLKGPLTL*QHTARA
Trigger: TGCACGAGCTGTGTGCTGCCAGAGTGTCAGAGGTCC...CTTGAGTGACGTCTCTGTCGTGTGGGTGCCAAGTGCTTGTGTAGAAACTGTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CCA 90 bp GTAGCGATACATTCACAGGACACAGTTGGTGTCCAGAAAAGGGGGCTCAGAACAGGACCTCTGACACTCTaGCAGCACACAGCTCGTGCA +
Preference number: 4 (lower is better)
Translates to: VAIHSQDTVGVQKRGLRTGPLTL*QHTARA
Trigger: TGCACGAGCTGTGTGCTGCCAGAGTGTCAGAGGTCC...TGTTCTGAGCCCCCTTTTCTGGACACCAACTGTGTCCTGTGAATGTATCGCTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CCA 90 bp TCAGAACACAGTTTCTACACAAGCACTTGGCACCCACACGACAGAGACGTCACTCTGGCCAGATGTGACTaGAAGAGGCTGATGCCAGGG +
Preference number: 4 (lower is better)
Translates to: SEHSFYTSTWHPHDRDVTLARCD*KRLMPG
Trigger: CCCTGGCATCAGCCTCTTCCAGTCACATCTGGCCAG...AGTGACGTCTCTGTCGTGTGGGTGCCAAGTGCTTGTGTAGAAACTGTGTTCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CCA 90 bp GCCCCTGTCAACCTTTTATTGGGAGTGGAACACATGAGGTTCAGCTCGTGCCGGTTCACAGGACACAGTTaGTGTCCAGAAAAGGGGGCT +
Preference number: 4 (lower is better)
Translates to: APVNLLLGVEHMRFSSCRFTGHS*CPEKGA
Trigger: AGCCCCCTTTTCTGGACACCAACTGTGTCCTGTGAA...CCGGCACGAGCTGAACCTCATGTGTTCCACTCCCAATAAAAGGTTGACAGGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CCA 90 bp GATCTCAGGTGCCAGGTGGGCAAATGCTACTGTCGCTCAACGAGAGGAATCCCATTCACAGGACACAGTTaGTGTCCAGAAAAGGGGGCT +
Preference number: 4 (lower is better)
Translates to: DLRCQVGKCYCRSTRGIPFTGHS*CPEKGA
Trigger: AGCCCCCTTTTCTGGACACCAACTGTGTCCTGTGAA...TGGGATTCCTCTCGTTGAGCGACAGTAGCATTTGCCCACCTGGCACCTGAGATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376652.9
CDS-3UTR CCA 90 bp AGGAGAAGCCCCTGTCAACCTTTTATTGGGAGTGGAACACATGAGGTTCAGCTCCCGAGAGCTTGGTTCTaGGACTGTGGCTCAGCTGAC +
Preference number: 4 (lower is better)
Translates to: RRSPCQPFIGSGTHEVQLPRAWF*DCGSAD
Trigger: GTCAGCTGAGCCACAGTCCCAGAACCAAGCTCTCGG...GAGCTGAACCTCATGTGTTCCACTCCCAATAAAAGGTTGACAGGGGCTTCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CCA 90 bp GTAGCGATACATTCACAGGACACAGTTGGTGTCCAGAAAAGGGGGCTCAGAACACCGAGAGCTTGGTTCTaGGACTGTGGCTCAGCTGAC +
Preference number: 4 (lower is better)
Translates to: VAIHSQDTVGVQKRGLRTPRAWF*DCGSAD
Trigger: GTCAGCTGAGCCACAGTCCCAGAACCAAGCTCTCGG...TGTTCTGAGCCCCCTTTTCTGGACACCAACTGTGTCCTGTGAATGTATCGCTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CCA 90 bp CTTGCTGAACAGAATGACATGGGGACTTGCAGCTCACTCGAGGTTATGTGCCCACTCAGTGGGCAGCAATaGGTGCTAAGTGATGTGGGG +
Preference number: 4 (lower is better)
Translates to: LAEQNDMGTCSSLEVMCPLSGQQ*VLSDVG
Trigger: CCCCACATCACTTAGCACCCATTGCTGCCCACTGAG...TGGGCACATAACCTCGAGTGAGCTGCAAGTCCCCATGTCATTCTGTTCAGCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376652.9
3UTR CAA 72 bp AAAAGGGGGCTCAGAACACAGTTTCTACACAAGCACTaGGCACCCACACGACAGAGACGTCACTCAAGCAGC +
Preference number: 4 (lower is better)
Translates to: KRGLRTQFLHKH*APTRQRRHSSS
Trigger: GCTGCTTGAGTGACGTCTCTGTCGTGTGGGTGCCAAGTGCTTGTGTAGAAACTGTGTTCTGAGCCCCCTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR TCA 90 bp GGAGAAGCCCCTGTCAACCTTTTATTGGGAGTGGAACACATGAGGTTCAGCTCGGTTTTGAAGGACCTCTaGCACTCTGGCAGCACACAG +
Preference number: 4 (lower is better)
Translates to: GEAPVNLLLGVEHMRFSSVLKDL*HSGSTQ
Trigger: CTGTGTGCTGCCAGAGTGTCAGAGGTCCTTCAAAAC...CGAGCTGAACCTCATGTGTTCCACTCCCAATAAAAGGTTGACAGGGGCTTCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR TCA 90 bp ACAGCTCACAGTAGCGATACATTCACAGGACACAGTTGGTGTCCAGAAAAGGGGATGGCTCGGCCACTATaGGGCTGGACTCTTCTGTCT +
Preference number: 4 (lower is better)
Translates to: TAHSSDTFTGHSWCPEKGMARPL*GWTLLS
Trigger: AGACAGAAGAGTCCAGCCTCATAGTGGCCGAGCCAT...CCCCTTTTCTGGACACCAACTGTGTCCTGTGAATGTATCGCTACTGTGAGCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR TCA 90 bp TCAGAACACAGTTTCTACACAAGCACTTGGCACCCACACGACAGAGACGTCACTGAGCAGGCCTCTGGGTaGACTCACACATTCATACCC +
Preference number: 4 (lower is better)
Translates to: SEHSFYTSTWHPHDRDVTEQASG*THTFIP
Trigger: GGGTATGAATGTGTGAGTTCACCCAGAGGCCTGCTC...AGTGACGTCTCTGTCGTGTGGGTGCCAAGTGCTTGTGTAGAAACTGTGTTCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR TCA 90 bp ACAGCTCACAGTAGCGATACATTCACAGGACACAGTTGGTGTCCAGAAAAGGGGAAACCACACAATGTGTaGGGAGAGCAGGCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: TAHSSDTFTGHSWCPEKGKPHNV*GEQASG
Trigger: CCCAGAGGCCTGCTCTCCTCACACATTGTGTGGTTT...CCCCTTTTCTGGACACCAACTGTGTCCTGTGAATGTATCGCTACTGTGAGCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR TCA 90 bp AACACAGTTTCTACACAAGCACTTGGCACCCACACGACAGAGACGTCACTCAAGAAACCACACAATGTGTaGGGAGAGCAGGCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: NTVSTQALGTHTTETSLKKPHNV*GEQASG
Trigger: CCCAGAGGCCTGCTCTCCTCACACATTGTGTGGTTT...CTTGAGTGACGTCTCTGTCGTGTGGGTGCCAAGTGCTTGTGTAGAAACTGTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR GCA 90 bp GTTTCTACACAAGCACTTGGCACCCACACGACAGAGACGTCACTCAAGCAGCACGGTGCCAGTGCTTCCTaGATCAAACATGATCCCGTA +
Preference number: 4 (lower is better)
Translates to: VSTQALGTHTTETSLKQHGASAS*IKHDPV
Trigger: TACGGGATCATGTTTGATGCAGGAAGCACTGGCACC...GTGCTGCTTGAGTGACGTCTCTGTCGTGTGGGTGCCAAGTGCTTGTGTAGAAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000433259.6
CDS-3UTR GCA 90 bp CTTCTGTCTGTTCAGGGAGTCGATGTAATGAAAAATGGCCCCCAGAGCCCAGCTGAGGCCCACACCAGCTaGAAGGTCGTAATAGTAGGA +
Preference number: 4 (lower is better)
Translates to: LLSVQGVDVMKNGPQSPAEAHTS*KVVIVG
Trigger: TCCTACTATTACGACCTTGCAGCTGGTGTGGGCCTC...AGCTGGGCTCTGGGGGCCATTTTTCATTACATCGACTCCCTGAACAGACAGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000376666.3
ENST00000433259.6
CDS-3UTR GCA 90 bp AGAGAAGGAGAAGCCCCTGTCAACCTTTTATTGGGAGTGGAACACATGAGGTTCTGCCCCCTCAGTGTGTaGCTGTGGTTCTGTCCTGGT +
Preference number: 4 (lower is better)
Translates to: REGEAPVNLLLGVEHMRFCPLSV*LWFCPG
Trigger: ACCAGGACAGAACCACAGGCACACACTGAGGGGGCA...GAACCTCATGTGTTCCACTCCCAATAAAAGGTTGACAGGGGCTTCTCCTTCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR GCA 90 bp CAACCTTTTATTGGGAGTGGAACACATGAGGTTCAGCTCGTGCCGGGCACTGTAATGAGGTTCAGCTCGTaGCGGGCACTGTACATTCAC +
Preference number: 4 (lower is better)
Translates to: QPFIGSGTHEVQLVPGTVMRFSS*RALYIH
Trigger: GTGAATGTACAGTGCCCGGCACGAGCTGAACCTCAT...TACAGTGCCCGGCACGAGCTGAACCTCATGTGTTCCACTCCCAATAAAAGGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR GCA 90 bp CACCTGCCGTCTATGAGGAGGTGTCTCCCTCCATCATTAACCCCAAACCACACACAGAGAGAAATGACTTaGATACTTTGCCGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: HLPSMRRCLPPSLTPNHTQREMT*ILCRAQ
Trigger: CTGGGCCCGGCAAAGTATGCAAGTCATTTCTCTCTG...TGTGTGGTTTGGGGTTAATGATGGAGGGAGACACCTCCTCATAGACGGCAGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376652.9
CDS-3UTR CCA 90 bp CTACACAAGCACTTGGCACCCACACGACAGAGACGTCACTCAAGCAGCACAGCCATAGGCAGAAAGACCTaGCTTCAGTGCTTTGAAGGT +
Preference number: 4 (lower is better)
Translates to: LHKHLAPTRQRRHSSSTAIGRKT*LQCFEG
Trigger: ACCTTCAAAGCACTGAAGCCAGGTCTTTCTGCCTAT...GGCTGTGCTGCTTGAGTGACGTCTCTGTCGTGTGGGTGCCAAGTGCTTGTGTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000433259.6
CDS-3UTR CCA 90 bp ACAGCTCACAGTAGCGATACATTCACAGGACACAGTTGGTGTCCAGAAAAGGGGCACGCTGCTCCCTCCTaGAGTTTTCAAGCTGCCTGT +
Preference number: 4 (lower is better)
Translates to: TAHSSDTFTGHSWCPEKGHAAPS*SFQAAC
Trigger: ACAGGCAGCTTGAAAACTCCAGGAGGGAGCAGCGTG...CCCCTTTTCTGGACACCAACTGTGTCCTGTGAATGTATCGCTACTGTGAGCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CCA 90 bp TCAGAACACAGTTTCTACACAAGCACTTGGCACCCACACGACAGAGACGTCACTCACGCTGCTCCCTCCTaGAGTTTTCAAGCTGCCTGT +
Preference number: 4 (lower is better)
Translates to: SEHSFYTSTWHPHDRDVTHAAPS*SFQAAC
Trigger: ACAGGCAGCTTGAAAACTCCAGGAGGGAGCAGCGTG...AGTGACGTCTCTGTCGTGTGGGTGCCAAGTGCTTGTGTAGAAACTGTGTTCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CCA 90 bp TTAACCCCAAACCACACAATGTGTGAGGAGAGCAGGCCTCTGGGTGAACTCACATCAGCACTTTGCTCCTaGGAAAGCCGAACTCCTGGA +
Preference number: 4 (lower is better)
Translates to: LTPNHTMCEESRPLGELTSALCS*ESRTPG
Trigger: TCCAGGAGTTCGGCTTTCCCAGGAGCAAAGTGCTGA...TGTGAGTTCACCCAGAGGCCTGCTCTCCTCACACATTGTGTGGTTTGGGGTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CCA 90 bp GGAGAAGCCCCTGTCAACCTTTTATTGGGAGTGGAACACATGAGGTTCAGCTCGCGATGTAATGAAAAATaGCCCCCAGAGCCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: GEAPVNLLLGVEHMRFSSRCNEK*PPEPSW
Trigger: CCAGCTGGGCTCTGGGGGCCATTTTTCATTACATCG...CGAGCTGAACCTCATGTGTTCCACTCCCAATAAAAGGTTGACAGGGGCTTCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CCA 90 bp TGGCTCCTCAGGATGAAGTCACGTCCAGGACAGGAGGGTTTATGCAGACACACATTCACAGGACACAGTTaGTGTCCAGAAAAGGGGGCT +
Preference number: 4 (lower is better)
Translates to: WLLRMKSRPGQEGLCRHTFTGHS*CPEKGA
Trigger: AGCCCCCTTTTCTGGACACCAACTGTGTCCTGTGAA...TGTGTGTCTGCATAAACCCTCCTGTCCTGGACGTGACTTCATCCTGAGGAGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CCA 90 bp GAACAGCTCACAGTAGCGATACATTCACAGGACACAGTTGGTGTCCAGAAAAGGCCTAAGACATGGCCCTaGCTAGGCGGGAACAGCTCA +
Preference number: 4 (lower is better)
Translates to: EQLTVAIHSQDTVGVQKRPKTWP*LGGNSS
Trigger: TGAGCTGTTCCCGCCTAGCCAGGGCCATGTCTTAGG...CCTTTTCTGGACACCAACTGTGTCCTGTGAATGTATCGCTACTGTGAGCTGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR TCA 90 bp CATTCATACCCAAGGAAGAGGCAAACACACTCAAGTCCAGAGTTCCCAGTGGTGTGTAGGCAACATAGATaGACACGCCCACACACAGCC +
Preference number: 4 (lower is better)
Translates to: HSYPRKRQTHSSPEFPVVCRQHR*TRPHTA
Trigger: GGCTGTGTGTGGGCGTGTTCATCTATGTTGCCTACA...CACCACTGGGAACTCTGGACTTGAGTGTGTTTGCCTCTTCCTTGGGTATGAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000433259.6
CDS-3UTR TCA 90 bp GGAGAAGCCCCTGTCAACCTTTTATTGGGAGTGGAACACATGAGGTTCAGCTCGAGTTCCCGGATTCCCTaGGCGCTCTTTTCAACATCA +
Preference number: 4 (lower is better)
Translates to: GEAPVNLLLGVEHMRFSSSSRIP*ALFSTS
Trigger: TGATGTTGAAAAGAGCGCTCAGGGAATCCGGGAACT...CGAGCTGAACCTCATGTGTTCCACTCCCAATAAAAGGTTGACAGGGGCTTCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000433259.6
CDS-3UTR TCA 90 bp TTCATACCCAAGGAAGAGGCAAACACACTCAAGTCCAGAGTTCCCAGTGGTGCCAGTTCCCGGATTCCCTaGGCGCTCTTTTCAACATCA +
Preference number: 4 (lower is better)
Translates to: FIPKEEANTLKSRVPSGASSRIP*ALFSTS
Trigger: TGATGTTGAAAAGAGCGCTCAGGGAATCCGGGAACT...GGCACCACTGGGAACTCTGGACTTGAGTGTGTTTGCCTCTTCCTTGGGTATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000433259.6
CDS-3UTR TCA 90 bp TGGCTCCTCAGGATGAAGTCACGTCCAGGACAGGAGGGTTTATGCAGACACACACATCTGTTCCGTTCATaGTGGAAACACAGTCATCCC +
Preference number: 4 (lower is better)
Translates to: WLLRMKSRPGQEGLCRHTHLFRS*WKHSHP
Trigger: GGGATGACTGTGTTTCCATCATGAACGGAACAGATG...TGTGTGTCTGCATAAACCCTCCTGTCCTGGACGTGACTTCATCCTGAGGAGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR TCA 90 bp AACACAGTTTCTACACAAGCACTTGGCACCCACACGACAGAGACGTCACTCAAGGAGACAAGCAAGGGCTaGCCAACTCCTTTCCATCCT +
Preference number: 4 (lower is better)
Translates to: NTVSTQALGTHTTETSLKETSKG*PTPFHP
Trigger: AGGATGGAAAGGAGTTGGTCAGCCCTTGCTTGTCTC...CTTGAGTGACGTCTCTGTCGTGTGGGTGCCAAGTGCTTGTGTAGAAACTGTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
CDS-3UTR TCA 90 bp GTAGCGATACATTCACAGGACACAGTTGGTGTCCAGAAAAGGGGGCTCAGAACAGAGACAAGCAAGGGCTaGCCAACTCCTTTCCATCCT +
Preference number: 4 (lower is better)
Translates to: VAIHSQDTVGVQKRGLRTETSKG*PTPFHP
Trigger: AGGATGGAAAGGAGTTGGTCAGCCCTTGCTTGTCTC...TGTTCTGAGCCCCCTTTTCTGGACACCAACTGTGTCCTGTGAATGTATCGCTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
CDS-3UTR TCA 90 bp AGGAGAAGCCCCTGTCAACCTTTTATTGGGAGTGGAACACATGAGGTTCAGCTCGTTTTGAAGGACCTCTaGCACTCTGGCAGCACACAG +
Preference number: 4 (lower is better)
Translates to: RRSPCQPFIGSGTHEVQLVLKDL*HSGSTQ
Trigger: CTGTGTGCTGCCAGAGTGTCAGAGGTCCTTCAAAAC...GAGCTGAACCTCATGTGTTCCACTCCCAATAAAAGGTTGACAGGGGCTTCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR TCA 90 bp GTTTCTACACAAGCACTTGGCACCCACACGACAGAGACGTCACTCAAGCAGCACTGTCAATTTTCCGAGTaGGCTTCAGCACTTTGCTCC +
Preference number: 4 (lower is better)
Translates to: VSTQALGTHTTETSLKQHCQFSE*ASALCS
Trigger: GGAGCAAAGTGCTGAAGCTCACTCGGAAAATTGACA...GTGCTGCTTGAGTGACGTCTCTGTCGTGTGGGTGCCAAGTGCTTGTGTAGAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR TCA 90 bp TCAGAACACAGTTTCTACACAAGCACTTGGCACCCACACGACAGAGACGTCACTGCACTGTACATTCACTaGAGCAGCTCAAGGGGCTCA +
Preference number: 4 (lower is better)
Translates to: SEHSFYTSTWHPHDRDVTALYIH*SSSRGS
Trigger: TGAGCCCCTTGAGCTGCTTCAGTGAATGTACAGTGC...AGTGACGTCTCTGTCGTGTGGGTGCCAAGTGCTTGTGTAGAAACTGTGTTCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR TCA 90 bp AACACAGTTTCTACACAAGCACTTGGCACCCACACGACAGAGACGTCACTCAAGGCACTGTACATTCACTaGAGCAGCTCAAGGGGCTCA +
Preference number: 4 (lower is better)
Translates to: NTVSTQALGTHTTETSLKALYIH*SSSRGS
Trigger: TGAGCCCCTTGAGCTGCTTCAGTGAATGTACAGTGC...CTTGAGTGACGTCTCTGTCGTGTGGGTGCCAAGTGCTTGTGTAGAAACTGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR TCA 90 bp GGGCTTCAGGCACAAGCACTCGGGATGTGGGCTGGTCTGCAGTTTCCCTGGCATCCCAGAAATATTCCATaGCTTATTTGGTGCACTTTT +
Preference number: 4 (lower is better)
Translates to: GLQAQALGMWAGLQFPWHPRNIP*LIWCTF
Trigger: AAAAGTGCACCAAATAAGTCATGGAATATTTCTGGG...ATGCCAGGGAAACTGCAGACCAGCCCACATCCCGAGTGCTTGTGCCTGAAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376652.9
CDS-3UTR GCA 90 bp AACACAGTTTCTACACAAGCACTTGGCACCCACACGACAGAGACGTCACTCAAGAGACGTGTACTCGGGTaGCAGTGCTTCCTGCATCAA +
Preference number: 4 (lower is better)
Translates to: NTVSTQALGTHTTETSLKRRVLG*QCFLHQ
Trigger: TTGATGCAGGAAGCACTGGCACCCGAGTACACGTCT...CTTGAGTGACGTCTCTGTCGTGTGGGTGCCAAGTGCTTGTGTAGAAACTGTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000433259.6
CDS-3UTR GCA 90 bp AGGAGAAGCCCCTGTCAACCTTTTATTGGGAGTGGAACACATGAGGTTCAGCTCAGACGTGTACTCGGGTaGCAGTGCTTCCTGCATCAA +
Preference number: 4 (lower is better)
Translates to: RRSPCQPFIGSGTHEVQLRRVLG*QCFLHQ
Trigger: TTGATGCAGGAAGCACTGGCACCCGAGTACACGTCT...GAGCTGAACCTCATGTGTTCCACTCCCAATAAAAGGTTGACAGGGGCTTCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000433259.6
CDS-3UTR GCA 90 bp AGAGAAGGAGAAGCCCCTGTCAACCTTTTATTGGGAGTGGAACACATGAGGTTCCTTGCCGCTGCTTTCTaGCCTGAAACCCTGTACGTG +
Preference number: 4 (lower is better)
Translates to: REGEAPVNLLLGVEHMRFLAAAF*PETLYV
Trigger: CACGTACAGGGTTTCAGGGCAGAAAGCAGCGGCAAG...GAACCTCATGTGTTCCACTCCCAATAAAAGGTTGACAGGGGCTTCTCCTTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
CDS-3UTR CCA 90 bp CAACCTTTTATTGGGAGTGGAACACATGAGGTTCAGCTCGTGCCGGGCACTGTAACCCGCAGGCTCCCGTaGTTGGATATTTTTCTCATC +
Preference number: 4 (lower is better)
Translates to: QPFIGSGTHEVQLVPGTVTRRLP*LDIFLI
Trigger: GATGAGAAAAATATCCAACCACGGGAGCCTGCGGGT...TACAGTGCCCGGCACGAGCTGAACCTCATGTGTTCCACTCCCAATAAAAGGTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000433259.6
CDS-3UTR CCA 90 bp AGGAGAAGCCCCTGTCAACCTTTTATTGGGAGTGGAACACATGAGGTTCAGCTCTCAGCACTTTGCTCCTaGGAAAGCCGAACTCCTGGA +
Preference number: 4 (lower is better)
Translates to: RRSPCQPFIGSGTHEVQLSALCS*ESRTPG
Trigger: TCCAGGAGTTCGGCTTTCCCAGGAGCAAAGTGCTGA...GAGCTGAACCTCATGTGTTCCACTCCCAATAAAAGGTTGACAGGGGCTTCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CCA 90 bp AGAGAAGGAGAAGCCCCTGTCAACCTTTTATTGGGAGTGGAACACATGAGGTTCAGACTCCCTGAAAGGTaGGCACCTGCCGTCTATGAG +
Preference number: 4 (lower is better)
Translates to: REGEAPVNLLLGVEHMRFRLPER*APAVYE
Trigger: CTCATAGACGGCAGGTGCCCACCTTTCAGGGAGTCT...GAACCTCATGTGTTCCACTCCCAATAAAAGGTTGACAGGGGCTTCTCCTTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CCA 90 bp GGAGAAGCCCCTGTCAACCTTTTATTGGGAGTGGAACACATGAGGTTCAGCTCGCTGAACAGAATGACATaGGGACTTGCAGCTCACTCG +
Preference number: 4 (lower is better)
Translates to: GEAPVNLLLGVEHMRFSSLNRMT*GLAAHS
Trigger: CGAGTGAGCTGCAAGTCCCCATGTCATTCTGTTCAG...CGAGCTGAACCTCATGTGTTCCACTCCCAATAAAAGGTTGACAGGGGCTTCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376652.9
CDS-3UTR CCA 90 bp CCACTGCTGTGTCCTCGAGAGGGATGTCGACAGGACTGGAAATACGCCACCCCCTTAAATCTGCCAGAATaGCAAAGATTAAACTGGCTG +
Preference number: 4 (lower is better)
Translates to: PLLCPREGCRQDWKYATPLNLPE*QRLNWL
Trigger: CAGCCAGTTTAATCTTTGCCATTCTGGCAGATTTAA...GGGGGTGGCGTATTTCCAGTCCTGTCGACATCCCTCTCGAGGACACAGCAGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376652.9
3UTR CAA 72 bp ACACCTTTGGGACGCTTCCAGACCAAAACCAGATCCTaGCTGAACAGAATGACATGGGGACTTGCAGCTCAC +
Preference number: 4 (lower is better)
Translates to: TPLGRFQTKTRS*LNRMTWGLAAH
Trigger: GTGAGCTGCAAGTCCCCATGTCATTCTGTTCAGCAAGGATCTGGTTTTGGTCTGGAAGCGTCCCAAAGGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376652.9
CDS-3UTR TCA 90 bp GAACAGCTCACAGTAGCGATACATTCACAGGACACAGTTGGTGTCCAGAAAAGGGAGACAAGCAAGGGCTaGCCAACTCCTTTCCATCCT +
Preference number: 4 (lower is better)
Translates to: EQLTVAIHSQDTVGVQKRETSKG*PTPFHP
Trigger: AGGATGGAAAGGAGTTGGTCAGCCCTTGCTTGTCTC...CCTTTTCTGGACACCAACTGTGTCCTGTGAATGTATCGCTACTGTGAGCTGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
CDS-3UTR TCA 90 bp AACACAGTTTCTACACAAGCACTTGGCACCCACACGACAGAGACGTCACTCAAGGTTCCCACTCTCCTTTaGAACTGGGAGACAAGCAAG +
Preference number: 4 (lower is better)
Translates to: NTVSTQALGTHTTETSLKVPTLL*NWETSK
Trigger: CTTGCTTGTCTCCCAGTTTCAAAGGAGAGTGGGAAC...CTTGAGTGACGTCTCTGTCGTGTGGGTGCCAAGTGCTTGTGTAGAAACTGTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
CDS-3UTR TCA 90 bp AACTCACACATTCATACCCAAGGAAGAGGCAAACACACTCAAGTCCAGAGTTCCGAGCAGGCCTCTGGGTaGACTCACACATTCATACCC +
Preference number: 4 (lower is better)
Translates to: NSHIHTQGRGKHTQVQSSEQASG*THTFIP
Trigger: GGGTATGAATGTGTGAGTTCACCCAGAGGCCTGCTC...GGAACTCTGGACTTGAGTGTGTTTGCCTCTTCCTTGGGTATGAATGTGTGAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR GCA 90 bp AGGAGAAGCCCCTGTCAACCTTTTATTGGGAGTGGAACACATGAGGTTCAGCTCGGTGCCAGTGCTTCCTaGATCAAACATGATCCCGTA +
Preference number: 4 (lower is better)
Translates to: RRSPCQPFIGSGTHEVQLGASAS*IKHDPV
Trigger: TACGGGATCATGTTTGATGCAGGAAGCACTGGCACC...GAGCTGAACCTCATGTGTTCCACTCCCAATAAAAGGTTGACAGGGGCTTCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000433259.6
CDS-3UTR CCA 90 bp TTAACCCCAAACCACACAATGTGTGAGGAGAGCAGGCCTCTGGGTGAACTCACAGCAGGCTCCCGTGGTTaGATATTTTTCTCATCCTTG +
Preference number: 4 (lower is better)
Translates to: LTPNHTMCEESRPLGELTAGSRG*IFFSSL
Trigger: CAAGGATGAGAAAAATATCCAACCACGGGAGCCTGC...TGTGAGTTCACCCAGAGGCCTGCTCTCCTCACACATTGTGTGGTTTGGGGTTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000433259.6
CDS-3UTR CCA 90 bp GTAGCGATACATTCACAGGACACAGTTGGTGTCCAGAAAAGGGGGCTCAGAACAACCCGCAGGCTCCCGTaGTTGGATATTTTTCTCATC +
Preference number: 4 (lower is better)
Translates to: VAIHSQDTVGVQKRGLRTTRRLP*LDIFLI
Trigger: GATGAGAAAAATATCCAACCACGGGAGCCTGCGGGT...TGTTCTGAGCCCCCTTTTCTGGACACCAACTGTGTCCTGTGAATGTATCGCTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000433259.6
CDS-3UTR CCA 90 bp CATTCATACCCAAGGAAGAGGCAAACACACTCAAGTCCAGAGTTCCCAGTGGTGCCCCCAGAGCCCAGCTaGTCTCAACATTGTCAATTT +
Preference number: 4 (lower is better)
Translates to: HSYPRKRQTHSSPEFPVVPPEPS*SQHCQF
Trigger: AAATTGACAATGTTGAGACCAGCTGGGCTCTGGGGG...CACCACTGGGAACTCTGGACTTGAGTGTGTTTGCCTCTTCCTTGGGTATGAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CCA 90 bp AACACAGTTTCTACACAAGCACTTGGCACCCACACGACAGAGACGTCACTCAAGAGGAGAGCAGGCCTCTaGGTGAACTCACACATTCAT +
Preference number: 4 (lower is better)
Translates to: NTVSTQALGTHTTETSLKRRAGL*VNSHIH
Trigger: ATGAATGTGTGAGTTCACCCAGAGGCCTGCTCTCCT...CTTGAGTGACGTCTCTGTCGTGTGGGTGCCAAGTGCTTGTGTAGAAACTGTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CCA 90 bp GTGCCGGGCACTGTACATTCACTGAAGCAGCTCAAGGGGCTCAGCCCCGACACTTATTTGGTGCACTTTTaGAAAACTTCCAGTTGTTTG +
Preference number: 4 (lower is better)
Translates to: VPGTVHSLKQLKGLSPDTYLVHF*KTSSCL
Trigger: CAAACAACTGGAAGTTTTCCAAAAGTGCACCAAATA...AGTGTCGGGGCTGAGCCCCTTGAGCTGCTTCAGTGAATGTACAGTGCCCGGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000376652.9
CDS-3UTR TCA 90 bp CATTCATACCCAAGGAAGAGGCAAACACACTCAAGTCCAGAGTTCCCAGTGGTGTTCCTGCATCAAACATaGTCCCGTAGAAGACCTCGT +
Preference number: 4 (lower is better)
Translates to: HSYPRKRQTHSSPEFPVVFLHQT*SRRRPR
Trigger: ACGAGGTCTTCTACGGGATCATGTTTGATGCAGGAA...CACCACTGGGAACTCTGGACTTGAGTGTGTTTGCCTCTTCCTTGGGTATGAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000433259.6
CDS-3UTR TCA 90 bp ACAGCTCACAGTAGCGATACATTCACAGGACACAGTTGGTGTCCAGAAAAGGGGCATCTGTTCCGTTCATaGTGGAAACACAGTCATCCC +
Preference number: 4 (lower is better)
Translates to: TAHSSDTFTGHSWCPEKGHLFRS*WKHSHP
Trigger: GGGATGACTGTGTTTCCATCATGAACGGAACAGATG...CCCCTTTTCTGGACACCAACTGTGTCCTGTGAATGTATCGCTACTGTGAGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR TCA 90 bp CATTCATACCCAAGGAAGAGGCAAACACACTCAAGTCCAGAGTTCCCAGTGGTGTGTCAATTTTCCGAGTaGGCTTCAGCACTTTGCTCC +
Preference number: 4 (lower is better)
Translates to: HSYPRKRQTHSSPEFPVVCQFSE*ASALCS
Trigger: GGAGCAAAGTGCTGAAGCTCACTCGGAAAATTGACA...CACCACTGGGAACTCTGGACTTGAGTGTGTTTGCCTCTTCCTTGGGTATGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR TCA 90 bp GTTTCTACACAAGCACTTGGCACCCACACGACAGAGACGTCACTCAAGCAGCACTCAATGCACACATCCTaGGGGAACAGAATTTTCAAG +
Preference number: 4 (lower is better)
Translates to: VSTQALGTHTTETSLKQHSMHTS*GNRIFK
Trigger: CTTGAAAATTCTGTTCCCTCAGGATGTGTGCATTGA...GTGCTGCTTGAGTGACGTCTCTGTCGTGTGGGTGCCAAGTGCTTGTGTAGAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376652.9
CDS-3UTR GCA 90 bp AGGAGAAGCCCCTGTCAACCTTTTATTGGGAGTGGAACACATGAGGTTCAGCTCAATGACATGGGGACTTaGAGCTCACTCGAGGTTATG +
Preference number: 4 (lower is better)
Translates to: RRSPCQPFIGSGTHEVQLNDMGT*SSLEVM
Trigger: CATAACCTCGAGTGAGCTGCAAGTCCCCATGTCATT...GAGCTGAACCTCATGTGTTCCACTCCCAATAAAAGGTTGACAGGGGCTTCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000376652.9
CDS-3UTR CCA 90 bp CATTCATACCCAAGGAAGAGGCAAACACACTCAAGTCCAGAGTTCCCAGTGGTGGCAGGCTCCCGTGGTTaGATATTTTTCTCATCCTTG +
Preference number: 4 (lower is better)
Translates to: HSYPRKRQTHSSPEFPVVAGSRG*IFFSSL
Trigger: CAAGGATGAGAAAAATATCCAACCACGGGAGCCTGC...CACCACTGGGAACTCTGGACTTGAGTGTGTTTGCCTCTTCCTTGGGTATGAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000433259.6
CDS-3UTR CCA 90 bp AGAGAAGGAGAAGCCCCTGTCAACCTTTTATTGGGAGTGGAACACATGAGGTTCACCCGCAGGCTCCCGTaGTTGGATATTTTTCTCATC +
Preference number: 4 (lower is better)
Translates to: REGEAPVNLLLGVEHMRFTRRLP*LDIFLI
Trigger: GATGAGAAAAATATCCAACCACGGGAGCCTGCGGGT...GAACCTCATGTGTTCCACTCCCAATAAAAGGTTGACAGGGGCTTCTCCTTCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000433259.6
CDS-3UTR CCA 90 bp CTTGCTGAACAGAATGACATGGGGACTTGCAGCTCACTCGAGGTTATGTGCCCAGCTTTGAAGGTTTCGTaGGTTAACGTGGGAGTTTCT +
Preference number: 4 (lower is better)
Translates to: LAEQNDMGTCSSLEVMCPALKVS*VNVGVS
Trigger: AGAAACTCCCACGTTAACCCACGAAACCTTCAAAGC...TGGGCACATAACCTCGAGTGAGCTGCAAGTCCCCATGTCATTCTGTTCAGCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376652.9
CDS-3UTR CCA 90 bp TTAACCCCAAACCACACAATGTGTGAGGAGAGCAGGCCTCTGGGTGAACTCACATTCTGCAGTAACTTCTaGGCCTTTTCTCCAGGTAAC +
Preference number: 4 (lower is better)
Translates to: LTPNHTMCEESRPLGELTFCSNF*AFSPGN
Trigger: GTTACCTGGAGAAAAGGCCCAGAAGTTACTGCAGAA...TGTGAGTTCACCCAGAGGCCTGCTCTCCTCACACATTGTGTGGTTTGGGGTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CCA 90 bp CTTCTGTCTGTTCAGGGAGTCGATGTAATGAAAAATGGCCCCCAGAGCCCAGCTTTCTGCAGTAACTTCTaGGCCTTTTCTCCAGGTAAC +
Preference number: 4 (lower is better)
Translates to: LLSVQGVDVMKNGPQSPAFCSNF*AFSPGN
Trigger: GTTACCTGGAGAAAAGGCCCAGAAGTTACTGCAGAA...AGCTGGGCTCTGGGGGCCATTTTTCATTACATCGACTCCCTGAACAGACAGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000376666.3
ENST00000433259.6
3UTR CAA 72 bp AGGGATGTCGACAGGACTGGAAATACGCCACCCCCTTaGGCAGCTTTTCTAAGGTTTAGTAAACAGGGATCT +
Preference number: 4 (lower is better)
Translates to: RDVDRTGNTPPP*AAFLRFSKQGS
Trigger: AGATCCCTGTTTACTAAACCTTAGAAAAGCTGCCAAAGGGGGTGGCGTATTTCCAGTCCTGTCGACATCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376652.9
CDS-3UTR TCA 90 bp GCAAAGATTAAACTGGCTGTAGCTGTTAGGACATGGGGGAGGCCAGCACCGATGACGTGTAGCTATTTTTaGCAAATGAGAGCCTACTTC +
Preference number: 4 (lower is better)
Translates to: AKIKLAVAVRTWGRPAPMTCSYF*QMRAYF
Trigger: GAAGTAGGCTCTCATTTGTCAAAAATAGCTACACGT...CATCGGTGCTGGCCTCCCCCATGTCCTAACAGCTACAGCCAGTTTAATCTTTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000376652.9
CDS-3UTR CCA 90 bp AACTCACACATTCATACCCAAGGAAGAGGCAAACACACTCAAGTCCAGAGTTCCACCCGCAGGCTCCCGTaGTTGGATATTTTTCTCATC +
Preference number: 4 (lower is better)
Translates to: NSHIHTQGRGKHTQVQSSTRRLP*LDIFLI
Trigger: GATGAGAAAAATATCCAACCACGGGAGCCTGCGGGT...GGAACTCTGGACTTGAGTGTGTTTGCCTCTTCCTTGGGTATGAATGTGTGAGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000433259.6
CDS-3UTR CCA 90 bp AGGACTGGAAATACGCCACCCCCTTTGGCAGCTTTTCTAAGGTTTAGTAAACAGAGGAGAGCAGGCCTCTaGGTGAACTCACACATTCAT +
Preference number: 4 (lower is better)
Translates to: RTGNTPPPLAAFLRFSKQRRAGL*VNSHIH
Trigger: ATGAATGTGTGAGTTCACCCAGAGGCCTGCTCTCCT...CTGTTTACTAAACCTTAGAAAAGCTGCCAAAGGGGGTGGCGTATTTCCAGTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376652.9
CDS-3UTR TCA 90 bp AACTCACACATTCATACCCAAGGAAGAGGCAAACACACTCAAGTCCAGAGTTCCTGTCAATTTTCCGAGTaGGCTTCAGCACTTTGCTCC +
Preference number: 4 (lower is better)
Translates to: NSHIHTQGRGKHTQVQSSCQFSE*ASALCS
Trigger: GGAGCAAAGTGCTGAAGCTCACTCGGAAAATTGACA...GGAACTCTGGACTTGAGTGTGTTTGCCTCTTCCTTGGGTATGAATGTGTGAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR GCA 90 bp AGAGAAGGAGAAGCCCCTGTCAACCTTTTATTGGGAGTGGAACACATGAGGTTCATGACTTGCATACTTTaGCGGGCCCAGAAATATTCC +
Preference number: 4 (lower is better)
Translates to: REGEAPVNLLLGVEHMRFMTCIL*RAQKYS
Trigger: GGAATATTTCTGGGCCCGGCAAAGTATGCAAGTCAT...GAACCTCATGTGTTCCACTCCCAATAAAAGGTTGACAGGGGCTTCTCCTTCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376652.9
3UTR CAA 72 bp CACAAAAGACACTCAGAGAGAAATGACTTGCATACTTaGCCGGGCCCAGAAATATTCCATGACTTATTTGGT +
Preference number: 4 (lower is better)
Translates to: HKRHSERNDLHT*PGPEIFHDLFG
Trigger: ACCAAATAAGTCATGGAATATTTCTGGGCCCGGCAAAGTATGCAAGTCATTTCTCTCTGAGTGTCTTTTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376652.9
3UTR CAA 72 bp CTTCATTATCACAAAAGACACTCAGAGAGAAATGACTaGCATACTTTGCCGGGCCCAGAAATATTCCATGAC +
Preference number: 4 (lower is better)
Translates to: LHYHKRHSERND*HTLPGPEIFHD
Trigger: GTCATGGAATATTTCTGGGCCCGGCAAAGTATGCAAGTCATTTCTCTCTGAGTGTCTTTTGTGATAATGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376652.9
CDS TCA 90 bp GGGGAGGCCTGCAGGGTGCCCTCCACGCGTGGCAGGAAGGCGATCTaGGTGGATCCTCCGCCCAAGTCCAGCATGCCCACGCTGCTCCCT +
Preference number: 5 (lower is better)
Translates to: GEACRVPSTRGRKAI*VDPPPKSSMPTLLP
Trigger: AGGGAGCAGCGTGGGCATGCTGGACTTGGGCGGAGGATCCACTCAGATCGCCTTCCTGCCACGCGTGGAGGGCACCCTGCAGGCCTCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000417467.5
ENST00000425813.5
ENST00000427553.5
ENST00000433259.6
ENST00000433417.5
ENST00000439162.5
ENST00000447877.5
ENST00000471478.1
CDS TCA 90 bp GCACCCGCTGGCTCCGCACTCCGGATTCACAGACAAGGCCGCAGCTaGGCGCAGAAGGCACCCAGTGCACAGCACAGGCAGGTGGGCGGC +
Preference number: 5 (lower is better)
Translates to: APAGSALRIHRQGRS*AQKAPSAQHRQVGG
Trigger: GCCGCCCACCTGCCTGTGCTGTGCACTGGGTGCCTTCTGCGCTCAGCTGCGGCCTTGTCTGTGAATCCGGAGTGCGGAGCCAGCGGGTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490187.1
CDS GCA 90 bp GCTTGCCGCAGGCTGCCCCTCCACGCCGCCCAGGATCGCCAGGCGTaGCGACATCAGCCCGAGCCCGAGGTAGCTGTAGGAATAGAGCTT +
Preference number: 5 (lower is better)
Translates to: ACRRLPLHAAQDRQA*RHQPEPEVAVGIEL
Trigger: AAGCTCTATTCCTACAGCTACCTCGGGCTCGGGCTGATGTCGGCACGCCTGGCGATCCTGGGCGGCGTGGAGGGGCAGCCTGCGGCAAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433259.6
ENST00000447877.5
ENST00000471478.1
CDS CCA 90 bp AGGCCTGCAGGGTGCCCTCCACGCGTGGCAGGAAGGCGATCTGAGTaGATCCTCCGCCCAAGTCCAGCATGCCCACGCTGCTCCCTCCTG +
Preference number: 5 (lower is better)
Translates to: RPAGCPPRVAGRRSE*ILRPSPACPRCSLL
Trigger: CAGGAGGGAGCAGCGTGGGCATGCTGGACTTGGGCGGAGGATCCACTCAGATCGCCTTCCTGCCACGCGTGGAGGGCACCCTGCAGGCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000417467.5
ENST00000425813.5
ENST00000427553.5
ENST00000433259.6
ENST00000433417.5
ENST00000439162.5
ENST00000447877.5
ENST00000471478.1
CDS CCA 90 bp GCACAGCACAGGCAGGTGGGCGGCAACCCCGGCTGCCACTGGGTCTaGGCTCCAAGGGGATTTGCACGCCTGGTGTTAGGGTCATGGGCC +
Preference number: 5 (lower is better)
Translates to: AQHRQVGGNPGCHWV*APRGFARLVLGSWA
Trigger: GGCCCATGACCCTAACACCAGGCGTGCAAATCCCCTTGGAGCCCAGACCCAGTGGCAGCCGGGGTTGCCGCCCACCTGCCTGTGCTGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490187.1
CDS TCA 90 bp AGCAGCCCTCAGGAGCCAGGGCATTGTTGGTCCCGGCGCAGGGAGTaGAGACCGTGGGCACGAAGGCAGCGGCAGACCTGGACTCTGAGG +
Preference number: 5 (lower is better)
Translates to: SSPQEPGHCWSRRRE*RPWARRQRQTWTLR
Trigger: CCTCAGAGTCCAGGTCTGCCGCTGCCTTCGTGCCCACGGTCTTCACTCCCTGCGCCGGGACCAACAATGCCCTGGCTCCTGAGGGCTGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485936.5
CDS CCA 90 bp CCCAGTGCACAGCACAGGCAGGTGGGCGGCAACCCCGGCTGCCACTaGGTCTGGGCTCCAAGGGGATTTGCACGCCTGGTGTTAGGGTCA +
Preference number: 5 (lower is better)
Translates to: PSAQHRQVGGNPGCH*VWAPRGFARLVLGS
Trigger: TGACCCTAACACCAGGCGTGCAAATCCCCTTGGAGCCCAGACCCAGTGGCAGCCGGGGTTGCCGCCCACCTGCCTGTGCTGTGCACTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490187.1
CDS-3UTR CAA 90 bp CGCCCAGACCTACTGTCCCGGGGGTGTTATGGCTGTCCCTCGGCTTCCCCAGAGAAGCCAGCTGTGGCCTaGAGGACCAGAGGGGTGGCC +
Preference number: 5 (lower is better)
Translates to: RPDLLSRGCYGCPSASPEKPAVA*RTRGVA
Trigger: GGCCACCCCTCTGGTCCTCAAGGCCACAGCTGGCTT...CTCTGGGGAAGCCGAGGGACAGCCATAACACCCCCGGGACAGTAGGTCTGGGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000433259.6
CDS GCA 90 bp GGGCGGCAACCCCGGCTGCCACTGGGTCTGGGCTCCAAGGGGATTTaGACGCCTGGTGTTAGGGTCATGGGCCAATGTCTCCCAAGCCAC +
Preference number: 5 (lower is better)
Translates to: GRQPRLPLGLGSKGI*TPGVRVMGQCLPSH
Trigger: GTGGCTTGGGAGACATTGGCCCATGACCCTAACACCAGGCGTGCAAATCCCCTTGGAGCCCAGACCCAGTGGCAGCCGGGGTTGCCGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490187.1
CDS GCA 90 bp AAGGCACCCAGTGCACAGCACAGGCAGGTGGGCGGCAACCCCGGCTaGCACTGGGTCTGGGCTCCAAGGGGATTTGCACGCCTGGTGTTA +
Preference number: 5 (lower is better)
Translates to: KAPSAQHRQVGGNPG*HWVWAPRGFARLVL
Trigger: TAACACCAGGCGTGCAAATCCCCTTGGAGCCCAGACCCAGTGGCAGCCGGGGTTGCCGCCCACCTGCCTGTGCTGTGCACTGGGTGCCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490187.1
CDS-3UTR CAA 90 bp AGCCCCGACACTGACGCCACACTGAGCAGGATGCACGGCCCGGGGCTCACACTGCGAGACACCGAGAGCTaGGTTCTGGGACTGTGGCTC +
Preference number: 5 (lower is better)
Translates to: SPDTDATLSRMHGPGLTLRDTES*VLGLWL
Trigger: GAGCCACAGTCCCAGAACCAAGCTCTCGGTGTCTCG...CAGTGTGAGCCCCGGGCCGTGCATCCTGCTCAGTGTGGCGTCAGTGTCGGGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CAA 90 bp CCCAGTGGTGCCGCCCAGACCTACTGTCCCGGGGGTGTTATGGCTGTCCCTCGGCGAGACACCGAGAGCTaGGTTCTGGGACTGTGGCTC +
Preference number: 5 (lower is better)
Translates to: PSGAAQTYCPGGVMAVPRRDTES*VLGLWL
Trigger: GAGCCACAGTCCCAGAACCAAGCTCTCGGTGTCTCG...CCGAGGGACAGCCATAACACCCCCGGGACAGTAGGTCTGGGCGGCACCACTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS TCA 90 bp GGGGCTGCTCTGCGGCTGTGTCTCCAGGGTCCGACACACTGGGGATaGGACACGTCCCTTCACGCTCCAGGTGACTCCCACCGTACTTGG +
Preference number: 5 (lower is better)
Translates to: GAALRLCLQGPTHWG*DTSLHAPGDSHRTW
Trigger: CCAAGTACGGTGGGAGTCACCTGGAGCGTGAAGGGACGTGTCTCATCCCCAGTGTGTCGGACCCTGGAGACACAGCCGCAGAGCAGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376666.3
ENST00000433259.6
CDS GCA 90 bp ATCCTTAGCAGGCTGCCCCTCCACGCCGCCCAGGATCGCCAGGCGTaGCGACATCAGCCCGAGCCCGAGGTAGCTGTAGGAATAGAGCTT +
Preference number: 5 (lower is better)
Translates to: ILSRLPLHAAQDRQA*RHQPEPEVAVGIEL
Trigger: AAGCTCTATTCCTACAGCTACCTCGGGCTCGGGCTGATGTCGGCACGCCTGGCGATCCTGGGCGGCGTGGAGGGGCAGCCTGCTAAGGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000425813.5
ENST00000433417.5
CDS CCA 90 bp GAGGGGCAAGTGCAGACCCCAATTCCACCCACTACAGGCACCCGCTaGCTCCGCACTCCGGATTCACAGACAAGGCCGCAGCTGAGCGCA +
Preference number: 5 (lower is better)
Translates to: EGQVQTPIPPTTGTR*LRTPDSQTRPQLSA
Trigger: TGCGCTCAGCTGCGGCCTTGTCTGTGAATCCGGAGTGCGGAGCCAGCGGGTGCCTGTAGTGGGTGGAATTGGGGTCTGCACTTGCCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490187.1
CDS-3UTR CAA 90 bp GGTGGCATTGAGCAGGGCCCAGGTCCAGACAGCCCTCTGGCCAGATGTGACTGGACAGCTCGTGCAGGCTaGCCGCTGCTTTCTGCCCTG +
Preference number: 5 (lower is better)
Translates to: GGIEQGPGPDSPLARCDWTARAG*PLLSAL
Trigger: CAGGGCAGAAAGCAGCGGCAAGCCTGCACGAGCTGT...CCAGTCACATCTGGCCAGAGGGCTGTCTGGACCTGGGCCCTGCTCAATGCCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
CDS-3UTR CAA 90 bp CCAGAGTTCCCAGTGGTGCCGCCCAGACCTACTGTCCCGGGGGTGTTATGGCTGACAGCTCGTGCAGGCTaGCCGCTGCTTTCTGCCCTG +
Preference number: 5 (lower is better)
Translates to: PEFPVVPPRPTVPGVLWLTARAG*PLLSAL
Trigger: CAGGGCAGAAAGCAGCGGCAAGCCTGCACGAGCTGT...CAGCCATAACACCCCCGGGACAGTAGGTCTGGGCGGCACCACTGGGAACTCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
CDS-3UTR CAA 90 bp GTGCCGCCCAGACCTACTGTCCCGGGGGTGTTATGGCTGTCCCTCGGCTTCCCCGTCCGACACACGTACTaGGCTGCGATCTCGAAGTCC +
Preference number: 5 (lower is better)
Translates to: VPPRPTVPGVLWLSLGFPVRHTY*AAISKS
Trigger: GGACTTCGAGATCGCAGCCAAGTACGTGTGTCGGAC...GGGGAAGCCGAGGGACAGCCATAACACCCCCGGGACAGTAGGTCTGGGCGGCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
CDS-3UTR CAA 90 bp TCAAGTCCAGAGTTCCCAGTGGTGCCGCCCAGACCTACTGTCCCGGGGGTGTTAACAGCTCGTGCAGGCTaGCCGCAGGCTGCCCCTCCA +
Preference number: 5 (lower is better)
Translates to: SSPEFPVVPPRPTVPGVLTARAG*PQAAPP
Trigger: TGGAGGGGCAGCCTGCGGCAAGCCTGCACGAGCTGT...TAACACCCCCGGGACAGTAGGTCTGGGCGGCACCACTGGGAACTCTGGACTTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433259.6
CDS TCA 90 bp AATGGACCGTGTGGACATCTGAGGGCGCCTCTACACCCCACACCTTaGCCCAGCTTCCCGGCTTTCCCAGTCCTCCTCCACCAGGCCCCA +
Preference number: 5 (lower is better)
Translates to: NGPCGHLRAPLHPTP*PSFPAFPVLLHQAP
Trigger: TGGGGCCTGGTGGAGGAGGACTGGGAAAGCCGGGAAGCTGGGTCAAGGTGTGGGGTGTAGAGGCGCCCTCAGATGTCCACACGGTCCATT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000481322.1
ENST00000485936.5
CDS CCA 90 bp TGGACTCTGAGGAGGAAGCTGCTGATGCCTGACACCAGTGGCCTCTaGCCTGTTGGGACCATCTGCCCTACATTCCCCCTCCGCCAGCCC +
Preference number: 5 (lower is better)
Translates to: WTLRRKLLMPDTSGL*PVGTICPTFPLRQP
Trigger: GGGCTGGCGGAGGGGGAATGTAGGGCAGATGGTCCCAACAGGCCAGAGGCCACTGGTGTCAGGCATCAGCAGCTTCCTCCTCAGAGTCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485936.5
CDS-3UTR CAA 90 bp GTGCCGGGCACTGTACATTCACTGAAGCAGCTCAAGGGGCTCAGCCCCGACACTAAGCCAGCTGTGGCCTaGAGGACCAGAGGGGTGGCC +
Preference number: 5 (lower is better)
Translates to: VPGTVHSLKQLKGLSPDTKPAVA*RTRGVA
Trigger: GGCCACCCCTCTGGTCCTCAAGGCCACAGCTGGCTT...AGTGTCGGGGCTGAGCCCCTTGAGCTGCTTCAGTGAATGTACAGTGCCCGGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000433259.6
CDS-3UTR CAA 90 bp GGAGGTGGGGTCAGCCCGAGGTGGGCGGATGGTGGCCCGAGACACCGAGAGCTTGCTTGTCCAGTAGGATaGAAGGCAACGTGGCAACGT +
Preference number: 5 (lower is better)
Translates to: GGGVSPRWADGGPRHRELACPVG*KATWQR
Trigger: ACGTTGCCACGTTGCCTTCAATCCTACTGGACAAGC...AAGCTCTCGGTGTCTCGGGCCACCATCCGCCCACCTCGGGCTGACCCCACCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376652.9
CDS-3UTR CAA 90 bp CGCCCAGACCTACTGTCCCGGGGGTGTTATGGCTGTCCCTCGGCTTCCCCAGAGGGCCAGCACCGATGCTaGTCCAGTAGGATTGAAGGC +
Preference number: 5 (lower is better)
Translates to: RPDLLSRGCYGCPSASPEGQHRC*SSRIEG
Trigger: GCCTTCAATCCTACTGGACAAGCATCGGTGCTGGCC...CTCTGGGGAAGCCGAGGGACAGCCATAACACCCCCGGGACAGTAGGTCTGGGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376652.9
CDS-3UTR CAA 90 bp TCATGCCCGGCATCCGCCCATGCTGGGAGACTCCCTGAAAGGTGGGCACCTGCCGTGAGCTTCAGCACTTaGCTCCTGGGAAAGCCGAAC +
Preference number: 5 (lower is better)
Translates to: SCPASAHAGRLPERWAPAVSFST*LLGKPN
Trigger: GTTCGGCTTTCCCAGGAGCAAAGTGCTGAAGCTCAC...GGCAGGTGCCCACCTTTCAGGGAGTCTCCCAGCATGGGCGGATGCCGGGCATGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS GCA 90 bp GTGGCAGGAAGGCGATCTGAGTGGATCCTCCGCCCAAGTCCAGCATaGCCACGCTGCTCCCTCCTGGAGTTTTCAAGCTGCCTGTCAGGA +
Preference number: 5 (lower is better)
Translates to: VAGRRSEWILRPSPA*PRCSLLEFSSCLSG
Trigger: TCCTGACAGGCAGCTTGAAAACTCCAGGAGGGAGCAGCGTGGGCATGCTGGACTTGGGCGGAGGATCCACTCAGATCGCCTTCCTGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000417467.5
ENST00000425813.5
ENST00000427553.5
ENST00000433259.6
ENST00000433417.5
ENST00000439162.5
ENST00000447877.5
ENST00000471478.1
CDS GCA 90 bp GGCTGCCTCCCTTCTCCGCATCTGTGGGAGACACAACACCCAGTCTaGAGGAGCACTGTGAGGTTGGCGATGCCACTGAGACGTGAGGCT +
Preference number: 5 (lower is better)
Translates to: GCLPSPHLWETQHPV*RSTVRLAMPLRREA
Trigger: AGCCTCACGTCTCAGTGGCATCGCCAACCTCACAGTGCTCCTGCAGACTGGGTGTTGTGTCTCCCACAGATGCGGAGAAGGGAGGCAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463734.1
CDS GCA 90 bp CAGCTGACAGAGGGCCCCGGTGTGTGCTGCTTGTGCGGCCTGGGGTaGTGCTGCTTCAGATCTGCGCAGTTTCTTGAAACCTCCTCCTGT +
Preference number: 5 (lower is better)
Translates to: QLTEGPGVCCLCGLG*CCFRSAQFLETSSC
Trigger: ACAGGAGGAGGTTTCAAGAAACTGCGCAGATCTGAAGCAGCAGCACCCCAGGCCGCACAAGCAGCACACACCGGGGCCCTCTGTCAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000481322.1
ENST00000485936.5
CDS CCA 90 bp CTTCCTCCGTCCTGTGCACTCTGTTTTGAAGGACCTCTGACACTCTaGCAGCACACAGCTCGTGCAGGCTTGCCGCAGGCTGCCCCTCCA +
Preference number: 5 (lower is better)
Translates to: LPPSCALCFEGPLTL*QHTARAGLPQAAPP
Trigger: TGGAGGGGCAGCCTGCGGCAAGCCTGCACGAGCTGTGTGCTGCCAGAGTGTCAGAGGTCCTTCAAAACAGAGTGCACAGGACGGAGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000433259.6
ENST00000447877.5
ENST00000471478.1
CDS-3UTR CAA 90 bp GTGCCGCCCAGACCTACTGTCCCGGGGGTGTTATGGCTGTCCCTCGGCTTCCCCTTTCTACACAAGCACTaGGCACCCACACGACAGAGA +
Preference number: 5 (lower is better)
Translates to: VPPRPTVPGVLWLSLGFPFLHKH*APTRQR
Trigger: TCTCTGTCGTGTGGGTGCCAAGTGCTTGTGTAGAAA...GGGGAAGCCGAGGGACAGCCATAACACCCCCGGGACAGTAGGTCTGGGCGGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS TCA 90 bp GATAAGGAAGTGGAGGCCCAGCTCACTTGCCAAGCTCCCATGGCTTaGGGGAGAACAGGAACAGAGGACCCCGGAGGCCAATGGACCGTG +
Preference number: 5 (lower is better)
Translates to: DKEVEAQLTCQAPMA*GRTGTEDPGGQWTV
Trigger: CACGGTCCATTGGCCTCCGGGGTCCTCTGTTCCTGTTCTCCCTCAAGCCATGGGAGCTTGGCAAGTGAGCTGGGCCTCCACTTCCTTATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485936.5
CDS GCA 90 bp GGGCCGGGTGAACTGGAAGACGTGTACTCGGGTGCCAGTGCTTCCTaGATCAAACATGATCCCGTAGAAGACCTCGTGCCCGTCTGCAGC +
Preference number: 5 (lower is better)
Translates to: GPGELEDVYSGASAS*IKHDPVEDLVPVCS
Trigger: GCTGCAGACGGGCACGAGGTCTTCTACGGGATCATGTTTGATGCAGGAAGCACTGGCACCCGAGTACACGTCTTCCAGTTCACCCGGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000417467.5
ENST00000418890.5
ENST00000425813.5
ENST00000433259.6
ENST00000435520.5
ENST00000439162.5
CDS GCA 90 bp CTGACAGAGGGCCCCGGTGTGTGCTGCTTGTGCGGCCTGGGGTGCTaGTGCTTCAGATCTGCGCAGTTTCTTGAAACCTCCTCCTGTCTT +
Preference number: 5 (lower is better)
Translates to: LTEGPGVCCLCGLGC*CFRSAQFLETSSCL
Trigger: AAGACAGGAGGAGGTTTCAAGAAACTGCGCAGATCTGAAGCAGCAGCACCCCAGGCCGCACAAGCAGCACACACCGGGGCCCTCTGTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000481322.1
ENST00000485936.5
CDS-3UTR CAA 90 bp CACTCAAGTCCAGAGTTCCCAGTGGTGCCGCCCAGACCTACTGTCCCGGGGGTGTTTTCTCATCCTTGTTaGCCAAGGACCGTGCTGCGG +
Preference number: 5 (lower is better)
Translates to: HSSPEFPVVPPRPTVPGVFSHPC*PRTVLR
Trigger: CCGCAGCACGGTCCTTGGCAAACAAGGATGAGAAAA...CACCCCCGGGACAGTAGGTCTGGGCGGCACCACTGGGAACTCTGGACTTGAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000433259.6
CDS-3UTR CAA 90 bp GAGCAGGGCCCAGGTCCAGACAGCCCTCTGGCCAGATGTGACTGGAAGAGGCTGTTTTCTCATCCTTGTTaGCCAAGGACCGTGCTGCGG +
Preference number: 5 (lower is better)
Translates to: EQGPGPDSPLARCDWKRLFSHPC*PRTVLR
Trigger: CCGCAGCACGGTCCTTGGCAAACAAGGATGAGAAAA...CAGCCTCTTCCAGTCACATCTGGCCAGAGGGCTGTCTGGACCTGGGCCCTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000433259.6
CDS-3UTR CAA 90 bp CCGGGGGTGTTATGGCTGTCCCTCGGCTTCCCCAGAGCAGCCAGGACAGCCTGCCAGCTGGTCTCAACATaGTCAATTTTCCGAGTGAGC +
Preference number: 5 (lower is better)
Translates to: PGVLWLSLGFPRAARTACQLVST*SIFRVS
Trigger: GCTCACTCGGAAAATTGACAATGTTGAGACCAGCTG...GCAGGCTGTCCTGGCTGCTCTGGGGAAGCCGAGGGACAGCCATAACACCCCCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS GCA 90 bp ACAGAGGGCCCCGGTGTGTGCTGCTTGTGCGGCCTGGGGTGCTGCTaGTTCAGATCTGCGCAGTTTCTTGAAACCTCCTCCTGTCTTAGA +
Preference number: 5 (lower is better)
Translates to: TEGPGVCCLCGLGCC*FRSAQFLETSSCLR
Trigger: TCTAAGACAGGAGGAGGTTTCAAGAAACTGCGCAGATCTGAAGCAGCAGCACCCCAGGCCGCACAAGCAGCACACACCGGGGCCCTCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000481322.1
ENST00000485936.5
CDS GCA 90 bp CCATCCTTCCGAGTGCTTCCAGGGTTCCCACGGTCCACAGACCCATaGTCCAACCCTTCGATCTCATTTCCTCCTGGTGTCCCCCACCAA +
Preference number: 5 (lower is better)
Translates to: PSFRVLPGFPRSTDP*SNPSISFPPGVPHQ
Trigger: TTGGTGGGGGACACCAGGAGGAAATGAGATCGAAGGGTTGGAGCATGGGTCTGTGGACCGTGGGAACCCTGGAAGCACTCGGAAGGATGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000481322.1
ENST00000485936.5
CDS CCA 90 bp CTTCCTCCGTCCTGTGCACTCTGTTTTGAAGGACCTCTGACACTCTaGCAGCACACAGCTCGTGCAGGCTTGCCGCTGCTTTCTGCCCTG +
Preference number: 5 (lower is better)
Translates to: LPPSCALCFEGPLTL*QHTARAGLPLLSAL
Trigger: CAGGGCAGAAAGCAGCGGCAAGCCTGCACGAGCTGTGTGCTGCCAGAGTGTCAGAGGTCCTTCAAAACAGAGTGCACAGGACGGAGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433417.5
CDS CCA 90 bp CAGCTGCGATCGCCCTCTCAGATCCCCGCCCCGTGTTATTTCTCTTaGAAGGCTTTCCCGATGAGCTTCACTGTCTGGCTCCTCCTGTGG +
Preference number: 5 (lower is better)
Translates to: QLRSPSQIPAPCYFS*KAFPMSFTVWLLLW
Trigger: CCACAGGAGGAGCCAGACAGTGAAGCTCATCGGGAAAGCCTTCCAAGAGAAATAACACGGGGCGGGGATCTGAGAGGGCGATCGCAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485936.5
CDS CCA 90 bp CTTCCTCCGTCCTGTGCACTCTGTTTTGAAGGACCTCTGACACTCTaGCAGCACACAGCTCGTGCAGGCTTGCCGCTGGGGACAAGCACA +
Preference number: 5 (lower is better)
Translates to: LPPSCALCFEGPLTL*QHTARAGLPLGTST
Trigger: TGTGCTTGTCCCCAGCGGCAAGCCTGCACGAGCTGTGTGCTGCCAGAGTGTCAGAGGTCCTTCAAAACAGAGTGCACAGGACGGAGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485936.5
CDS-3UTR CAA 90 bp GAGCAGGGCCCAGGTCCAGACAGCCCTCTGGCCAGATGTGACTGGAAGAGGCTGCGCAGGCTCCCGTGGTaGGATATTTTTCTCATCCTT +
Preference number: 5 (lower is better)
Translates to: EQGPGPDSPLARCDWKRLRRLPW*DIFLIL
Trigger: AAGGATGAGAAAAATATCCAACCACGGGAGCCTGCG...CAGCCTCTTCCAGTCACATCTGGCCAGAGGGCTGTCTGGACCTGGGCCCTGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000433259.6
CDS-3UTR CAA 90 bp GCAAAGATTAAACTGGCTGTAGCTGTTAGGACATGGGGGAGGCCAGCACCGATGAAGCCAGCTGTGGCCTaGAGGACCAGAGGGGTGGCC +
Preference number: 5 (lower is better)
Translates to: AKIKLAVAVRTWGRPAPMKPAVA*RTRGVA
Trigger: GGCCACCCCTCTGGTCCTCAAGGCCACAGCTGGCTT...CATCGGTGCTGGCCTCCCCCATGTCCTAACAGCTACAGCCAGTTTAATCTTTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376652.9
CDS-3UTR CAA 90 bp TCAAGTCCAGAGTTCCCAGTGGTGCCGCCCAGACCTACTGTCCCGGGGGTGTTACTGCCTGTCAGGAAGTaGATGGTGATCCACGCCGAA +
Preference number: 5 (lower is better)
Translates to: SSPEFPVVPPRPTVPGVLLPVRK*MVIHAE
Trigger: TTCGGCGTGGATCACCATCAACTTCCTGACAGGCAG...TAACACCCCCGGGACAGTAGGTCTGGGCGGCACCACTGGGAACTCTGGACTTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CAA 90 bp CAGCCAGGACAGCCTGCACCGCCTCCCAGACTCTTGCAGGAAGGGGAGCTCTGCTGTTCCCACTCTCCTTaGAAACTGGGAGACAAGCAA +
Preference number: 5 (lower is better)
Translates to: QPGQPAPPPRLLQEGELCCSHSP*KLGDKQ
Trigger: TTGCTTGTCTCCCAGTTTCAAAGGAGAGTGGGAACA...GCAGAGCTCCCCTTCCTGCAAGAGTCTGGGAGGCGGTGCAGGCTGTCCTGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
CDS TCA 90 bp TCTGGGCCTTTTCTCCAGGTAACAGGCGTAAGCCAGCTGTGGCCTTaGGGACCAGAGGGGTGGCCTTCCAGAAGTCGAACGGAATGTCCT +
Preference number: 5 (lower is better)
Translates to: SGPFLQVTGVSQLWP*GPEGWPSRSRTECP
Trigger: AGGACATTCCGTTCGACTTCTGGAAGGCCACCCCTCTGGTCCTCAAGGCCACAGCTGGCTTACGCCTGTTACCTGGAGAAAAGGCCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000433259.6
ENST00000433417.5
ENST00000439162.5
ENST00000447877.5
CDS TCA 90 bp ATGCTTCACTTCCTCCGTCCTGTGCACTCTGTTTTGAAGGACCTCTaGCACTCTGGCAGCACACAGCTCGTGCAGGCTTGCCGCAGGCTG +
Preference number: 5 (lower is better)
Translates to: MLHFLRPVHSVLKDL*HSGSTQLVQACRRL
Trigger: CAGCCTGCGGCAAGCCTGCACGAGCTGTGTGCTGCCAGAGTGTCAGAGGTCCTTCAAAACAGAGTGCACAGGACGGAGGAAGTGAAGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433259.6
ENST00000447877.5
ENST00000471478.1
CDS TCA 90 bp ATGCTTCACTTCCTCCGTCCTGTGCACTCTGTTTTGAAGGACCTCTaGCACTCTGGCAGCACACAGCTCGTGCAGGCTTGCCGCTGGGGA +
Preference number: 5 (lower is better)
Translates to: MLHFLRPVHSVLKDL*HSGSTQLVQACRWG
Trigger: TCCCCAGCGGCAAGCCTGCACGAGCTGTGTGCTGCCAGAGTGTCAGAGGTCCTTCAAAACAGAGTGCACAGGACGGAGGAAGTGAAGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485936.5
CDS GCA 90 bp CAGTGGGTGATTGACTTGGAAGGACCTGAACGGTTCGCGAAGGCATaGACCCCTCATGCCGAGTGCCCAGTCTGGGAATGGCGTTTGAAC +
Preference number: 5 (lower is better)
Translates to: QWVIDLEGPERFAKA*TPHAECPVWEWRLN
Trigger: GTTCAAACGCCATTCCCAGACTGGGCACTCGGCATGAGGGGTGCATGCCTTCGCGAACCGTTCAGGTCCTTCCAAGTCAATCACCCACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485936.5
CDS-3UTR CAA 90 bp AGCCCCGACACTGACGCCACACTGAGCAGGATGCACGGCCCGGGGCTCACACTGATATTTTTCTCATCCTaGTTTGCCAAGGACCGTGCT +
Preference number: 5 (lower is better)
Translates to: SPDTDATLSRMHGPGLTLIFFSS*FAKDRA
Trigger: AGCACGGTCCTTGGCAAACAAGGATGAGAAAAATAT...CAGTGTGAGCCCCGGGCCGTGCATCCTGCTCAGTGTGGCGTCAGTGTCGGGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000433259.6
CDS-3UTR CAA 90 bp CGTCCAGGACAGGAGGGTTTATGCAGACACACAGACACTGCTGACGGGGACAGGCTGCCTGTCAGGAAGTaGATGGTGATCCACGCCGAA +
Preference number: 5 (lower is better)
Translates to: RPGQEGLCRHTDTADGDRLPVRK*MVIHAE
Trigger: TTCGGCGTGGATCACCATCAACTTCCTGACAGGCAG...CCTGTCCCCGTCAGCAGTGTCTGTGTGTCTGCATAAACCCTCCTGTCCTGGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CAA 90 bp GTTTCTACACAAGCACTTGGCACCCACACGACAGAGACGTCACTCAAGCAGCACACAGCTCGTGCAGGCTaGCCGCTGCTTTCTGCCCTG +
Preference number: 5 (lower is better)
Translates to: VSTQALGTHTTETSLKQHTARAG*PLLSAL
Trigger: CAGGGCAGAAAGCAGCGGCAAGCCTGCACGAGCTGT...GTGCTGCTTGAGTGACGTCTCTGTCGTGTGGGTGCCAAGTGCTTGTGTAGAAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
CDS-3UTR CAA 90 bp CGTCCAGGACAGGAGGGTTTATGCAGACACACAGACACTGCTGACGGGGACAGGGTGAGCTTCAGCACTTaGCTCCTGGGAAAGCCGAAC +
Preference number: 5 (lower is better)
Translates to: RPGQEGLCRHTDTADGDRVSFST*LLGKPN
Trigger: GTTCGGCTTTCCCAGGAGCAAAGTGCTGAAGCTCAC...CCTGTCCCCGTCAGCAGTGTCTGTGTGTCTGCATAAACCCTCCTGTCCTGGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CAA 90 bp GTGCAGAAAGTGCCAGCACGGCCTGTGCTGTGGCTCCTCAGGATGAAGTCACGTGTGAGCTTCAGCACTTaGCTCCTGGGAAAGCCGAAC +
Preference number: 5 (lower is better)
Translates to: VQKVPARPVLWLLRMKSRVSFST*LLGKPN
Trigger: GTTCGGCTTTCCCAGGAGCAAAGTGCTGAAGCTCAC...ACGTGACTTCATCCTGAGGAGCCACAGCACAGGCCGTGCTGGCACTTTCTGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CAA 90 bp CCAGAGTTCCCAGTGGTGCCGCCCAGACCTACTGTCCCGGGGGTGTTATGGCTGCAGCTGGTCTCAACATaGTCAATTTTCCGAGTGAGC +
Preference number: 5 (lower is better)
Translates to: PEFPVVPPRPTVPGVLWLQLVST*SIFRVS
Trigger: GCTCACTCGGAAAATTGACAATGTTGAGACCAGCTG...CAGCCATAACACCCCCGGGACAGTAGGTCTGGGCGGCACCACTGGGAACTCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CAA 90 bp CACTCAAGTCCAGAGTTCCCAGTGGTGCCGCCCAGACCTACTGTCCCGGGGGTGCAGCTGGTCTCAACATaGTCAATTTTCCGAGTGAGC +
Preference number: 5 (lower is better)
Translates to: HSSPEFPVVPPRPTVPGVQLVST*SIFRVS
Trigger: GCTCACTCGGAAAATTGACAATGTTGAGACCAGCTG...CACCCCCGGGACAGTAGGTCTGGGCGGCACCACTGGGAACTCTGGACTTGAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CAA 90 bp GTGCTGTGGCTCCTCAGGATGAAGTCACGTCCAGGACAGGAGGGTTTATGCAGACGAGACACCGAGAGCTaGGTTCTGGGACTGTGGCTC +
Preference number: 5 (lower is better)
Translates to: VLWLLRMKSRPGQEGLCRRDTES*VLGLWL
Trigger: GAGCCACAGTCCCAGAACCAAGCTCTCGGTGTCTCG...TCTGCATAAACCCTCCTGTCCTGGACGTGACTTCATCCTGAGGAGCCACAGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CAA 90 bp GTGCAGAAAGTGCCAGCACGGCCTGTGCTGTGGCTCCTCAGGATGAAGTCACGTTTTTCTCATCCTTGTTaGCCAAGGACCGTGCTGCGG +
Preference number: 5 (lower is better)
Translates to: VQKVPARPVLWLLRMKSRFSHPC*PRTVLR
Trigger: CCGCAGCACGGTCCTTGGCAAACAAGGATGAGAAAA...ACGTGACTTCATCCTGAGGAGCCACAGCACAGGCCGTGCTGGCACTTTCTGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000433259.6
CDS-3UTR CAA 90 bp GCATTGAGCAGGGCCCAGGTCCAGACAGCCCTCTGGCCAGATGTGACTGGAAGACCTGGCTTCAGTGCTTaGAAGGTTTCGTGGGTTAAC +
Preference number: 5 (lower is better)
Translates to: ALSRAQVQTALWPDVTGRPGFSA*KVSWVN
Trigger: GTTAACCCACGAAACCTTCAAAGCACTGAAGCCAGG...TCTTCCAGTCACATCTGGCCAGAGGGCTGTCTGGACCTGGGCCCTGCTCAATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000433259.6
CDS-3UTR CAA 90 bp TGGCTCCTCAGGATGAAGTCACGTCCAGGACAGGAGGGTTTATGCAGACACACACGAGACACCGAGAGCTaGGTTCTGGGACTGTGGCTC +
Preference number: 5 (lower is better)
Translates to: WLLRMKSRPGQEGLCRHTRDTES*VLGLWL
Trigger: GAGCCACAGTCCCAGAACCAAGCTCTCGGTGTCTCG...TGTGTGTCTGCATAAACCCTCCTGTCCTGGACGTGACTTCATCCTGAGGAGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CAA 90 bp GGTACGCGGGCTGGGGTGGCATGTGGGGCGTGTGAGACCTGTCTGAGCTTGTCATCCTCTTTTTGTCTTTaGTCCTTTCCTGCTCTGTGC +
Preference number: 5 (lower is better)
Translates to: GTRAGVACGACETCLSLSSSFCL*SFPALC
Trigger: GCACAGAGCAGGAAAGGACAAAAGACAAAAAGAGGA...TGACAAGCTCAGACAGGTCTCACACGCCCCACATGCCACCCCAGCCCGCGTACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000376652.9
CDS-3UTR CAA 90 bp CGCCCAGACCTACTGTCCCGGGGGTGTTATGGCTGTCCCTCGGCTTCCCCAGAGTGGACCAAATTGATTTaGGCTTTACCTTCATGCGTC +
Preference number: 5 (lower is better)
Translates to: RPDLLSRGCYGCPSASPEWTKLI*ALPSCV
Trigger: GACGCATGAAGGTAAAGCCAAAATCAATTTGGTCCA...CTCTGGGGAAGCCGAGGGACAGCCATAACACCCCCGGGACAGTAGGTCTGGGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376652.9
CDS TCA 90 bp ATGCTTCACTTCCTCCGTCCTGTGCACTCTGTTTTGAAGGACCTCTaGCACTCTGGCAGCACACAGCTCGTGCAGGCTTGCCGCTGCTTT +
Preference number: 5 (lower is better)
Translates to: MLHFLRPVHSVLKDL*HSGSTQLVQACRCF
Trigger: AAAGCAGCGGCAAGCCTGCACGAGCTGTGTGCTGCCAGAGTGTCAGAGGTCCTTCAAAACAGAGTGCACAGGACGGAGGAAGTGAAGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433417.5
CDS CCA 90 bp TGGGTCTGGGCTCCAAGGGGATTTGCACGCCTGGTGTTAGGGTCATaGGCCAATGTCTCCCAAGCCACATTTCTACATCTAAGACCCTGG +
Preference number: 5 (lower is better)
Translates to: WVWAPRGFARLVLGS*ANVSQATFLHLRPW
Trigger: CCAGGGTCTTAGATGTAGAAATGTGGCTTGGGAGACATTGGCCCATGACCCTAACACCAGGCGTGCAAATCCCCTTGGAGCCCAGACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490187.1
CDS-3UTR CAA 90 bp CCCAAGGAAGAGGCAAACACACTCAAGTCCAGAGTTCCCAGTGGTGCCGCCCAGCCTGGCTTCAGTGCTTaGAAGGTTTCGTGGGTTAAC +
Preference number: 5 (lower is better)
Translates to: PKEEANTLKSRVPSGAAQPGFSA*KVSWVN
Trigger: GTTAACCCACGAAACCTTCAAAGCACTGAAGCCAGG...CTGGGCGGCACCACTGGGAACTCTGGACTTGAGTGTGTTTGCCTCTTCCTTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000433259.6
CDS-3UTR CAA 90 bp GAACAGCTCACAGTAGCGATACATTCACAGGACACAGTTGGTGTCCAGAAAAGGAAGCCAGCTGTGGCCTaGAGGACCAGAGGGGTGGCC +
Preference number: 5 (lower is better)
Translates to: EQLTVAIHSQDTVGVQKRKPAVA*RTRGVA
Trigger: GGCCACCCCTCTGGTCCTCAAGGCCACAGCTGGCTT...CCTTTTCTGGACACCAACTGTGTCCTGTGAATGTATCGCTACTGTGAGCTGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000433259.6
CDS-3UTR CAA 90 bp AACACAGTTTCTACACAAGCACTTGGCACCCACACGACAGAGACGTCACTCAAGACAGCTCGTGCAGGCTaGCCGCTGCTTTCTGCCCTG +
Preference number: 5 (lower is better)
Translates to: NTVSTQALGTHTTETSLKTARAG*PLLSAL
Trigger: CAGGGCAGAAAGCAGCGGCAAGCCTGCACGAGCTGT...CTTGAGTGACGTCTCTGTCGTGTGGGTGCCAAGTGCTTGTGTAGAAACTGTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
CDS-3UTR CAA 90 bp TCAAGTCCAGAGTTCCCAGTGGTGCCGCCCAGACCTACTGTCCCGGGGGTGTTACAGCTGGTCTCAACATaGTCAATTTTCCGAGTGAGC +
Preference number: 5 (lower is better)
Translates to: SSPEFPVVPPRPTVPGVLQLVST*SIFRVS
Trigger: GCTCACTCGGAAAATTGACAATGTTGAGACCAGCTG...TAACACCCCCGGGACAGTAGGTCTGGGCGGCACCACTGGGAACTCTGGACTTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CAA 90 bp CTGAAACTCACTGCCCTGGGATCCTGCCATCCAAACACGGGGACTGCAGGACTGTCAGAGAGAAATGACTaGCATACTTTGCCGGGCCCA +
Preference number: 5 (lower is better)
Translates to: LKLTALGSCHPNTGTAGLSERND*HTLPGP
Trigger: TGGGCCCGGCAAAGTATGCAAGTCATTTCTCTCTGA...CAGTCCTGCAGTCCCCGTGTTTGGATGGCAGGATCCCAGGGCAGTGAGTTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376652.9
CDS-3UTR CAA 90 bp GGAGAAGCCCCTGTCAACCTTTTATTGGGAGTGGAACACATGAGGTTCAGCTCGGTCCGACACACGTACTaGGCTGCGATCTCGAAGTCC +
Preference number: 5 (lower is better)
Translates to: GEAPVNLLLGVEHMRFSSVRHTY*AAISKS
Trigger: GGACTTCGAGATCGCAGCCAAGTACGTGTGTCGGAC...CGAGCTGAACCTCATGTGTTCCACTCCCAATAAAAGGTTGACAGGGGCTTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
CDS-3UTR CAA 90 bp CATTCATACCCAAGGAAGAGGCAAACACACTCAAGTCCAGAGTTCCCAGTGGTGCGAGACACCGAGAGCTaGGTTCTGGGACTGTGGCTC +
Preference number: 5 (lower is better)
Translates to: HSYPRKRQTHSSPEFPVVRDTES*VLGLWL
Trigger: GAGCCACAGTCCCAGAACCAAGCTCTCGGTGTCTCG...CACCACTGGGAACTCTGGACTTGAGTGTGTTTGCCTCTTCCTTGGGTATGAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CAA 90 bp CTGAAACTCACTGCCCTGGGATCCTGCCATCCAAACACGGGGACTGCAGGACTGAATACGCCACCCCCTTaGGCAGCTTTTCTAAGGTTT +
Preference number: 5 (lower is better)
Translates to: LKLTALGSCHPNTGTAGLNTPPP*AAFLRF
Trigger: AAACCTTAGAAAAGCTGCCAAAGGGGGTGGCGTATT...CAGTCCTGCAGTCCCCGTGTTTGGATGGCAGGATCCCAGGGCAGTGAGTTTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000376652.9
CDS-3UTR CAA 90 bp GCATTGAGCAGGGCCCAGGTCCAGACAGCCCTCTGGCCAGATGTGACTGGAAGAACCAAAACCAGATCCTaGCTGAACAGAATGACATGG +
Preference number: 5 (lower is better)
Translates to: ALSRAQVQTALWPDVTGRTKTRS*LNRMTW
Trigger: CCATGTCATTCTGTTCAGCAAGGATCTGGTTTTGGT...TCTTCCAGTCACATCTGGCCAGAGGGCTGTCTGGACCTGGGCCCTGCTCAATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376652.9
CDS-3UTR CAA 90 bp GCATCCGCCCATGCTGGGAGACTCCCTGAAAGGTGGGCACCTGCCGTCTATGAGAAAACTTCCAGTTGTTaGCCTTTTTCAGGCATGAGG +
Preference number: 5 (lower is better)
Translates to: ASAHAGRLPERWAPAVYEKTSSC*PFSGMR
Trigger: CCTCATGCCTGAAAAAGGCAAACAACTGGAAGTTTT...CTCATAGACGGCAGGTGCCCACCTTTCAGGGAGTCTCCCAGCATGGGCGGATGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376652.9
CDS-3UTR CAA 90 bp GTGCTGTGGCTCCTCAGGATGAAGTCACGTCCAGGACAGGAGGGTTTATGCAGACGCAGGCTCCCGTGGTaGGATATTTTTCTCATCCTT +
Preference number: 5 (lower is better)
Translates to: VLWLLRMKSRPGQEGLCRRRLPW*DIFLIL
Trigger: AAGGATGAGAAAAATATCCAACCACGGGAGCCTGCG...TCTGCATAAACCCTCCTGTCCTGGACGTGACTTCATCCTGAGGAGCCACAGCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000433259.6
CDS-3UTR CAA 90 bp GGAGAAGCCCCTGTCAACCTTTTATTGGGAGTGGAACACATGAGGTTCAGCTCGCTGCCTGTCAGGAAGTaGATGGTGATCCACGCCGAA +
Preference number: 5 (lower is better)
Translates to: GEAPVNLLLGVEHMRFSSLPVRK*MVIHAE
Trigger: TTCGGCGTGGATCACCATCAACTTCCTGACAGGCAG...CGAGCTGAACCTCATGTGTTCCACTCCCAATAAAAGGTTGACAGGGGCTTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CAA 90 bp ACAAATAGTTTACAGCAGCTCATGCCCGGCATCCGCCCATGCTGGGAGACTCCCTGTTCCCACTCTCCTTaGAAACTGGGAGACAAGCAA +
Preference number: 5 (lower is better)
Translates to: TNSLQQLMPGIRPCWETPCSHSP*KLGDKQ
Trigger: TTGCTTGTCTCCCAGTTTCAAAGGAGAGTGGGAACA...GGGAGTCTCCCAGCATGGGCGGATGCCGGGCATGAGCTGCTGTAAACTATTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
CDS-3UTR CAA 90 bp GTGCTGTGGCTCCTCAGGATGAAGTCACGTCCAGGACAGGAGGGTTTATGCAGATTTCTACACAAGCACTaGGCACCCACACGACAGAGA +
Preference number: 5 (lower is better)
Translates to: VLWLLRMKSRPGQEGLCRFLHKH*APTRQR
Trigger: TCTCTGTCGTGTGGGTGCCAAGTGCTTGTGTAGAAA...TCTGCATAAACCCTCCTGTCCTGGACGTGACTTCATCCTGAGGAGCCACAGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CAA 90 bp CGTCCAGGACAGGAGGGTTTATGCAGACACACAGACACTGCTGACGGGGACAGGAATGACTTGCATACTTaGCCGGGCCCAGAAATATTC +
Preference number: 5 (lower is better)
Translates to: RPGQEGLCRHTDTADGDRNDLHT*PGPEIF
Trigger: GAATATTTCTGGGCCCGGCAAAGTATGCAAGTCATT...CCTGTCCCCGTCAGCAGTGTCTGTGTGTCTGCATAAACCCTCCTGTCCTGGACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376652.9
CDS-3UTR CAA 90 bp TCTTCTGTCTGTTCAGGGAGTCGATGTAATGAAAAATGGCCCCCAGAGCCCAGCTTTTCTCATCCTTGTTaGCCAAGGACCGTGCTGCGG +
Preference number: 5 (lower is better)
Translates to: SSVCSGSRCNEKWPPEPSFSHPC*PRTVLR
Trigger: CCGCAGCACGGTCCTTGGCAAACAAGGATGAGAAAA...GCTGGGCTCTGGGGGCCATTTTTCATTACATCGACTCCCTGAACAGACAGAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000433259.6
CDS-3UTR CAA 90 bp TGGCTCCTCAGGATGAAGTCACGTCCAGGACAGGAGGGTTTATGCAGACACACACGCAGGCTCCCGTGGTaGGATATTTTTCTCATCCTT +
Preference number: 5 (lower is better)
Translates to: WLLRMKSRPGQEGLCRHTRRLPW*DIFLIL
Trigger: AAGGATGAGAAAAATATCCAACCACGGGAGCCTGCG...TGTGTGTCTGCATAAACCCTCCTGTCCTGGACGTGACTTCATCCTGAGGAGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000433259.6
CDS-3UTR CAA 90 bp CACCTGCCGTCTATGAGGAGGTGTCTCCCTCCATCATTAACCCCAAACCACACACCTGGCTTCAGTGCTTaGAAGGTTTCGTGGGTTAAC +
Preference number: 5 (lower is better)
Translates to: HLPSMRRCLPPSLTPNHTPGFSA*KVSWVN
Trigger: GTTAACCCACGAAACCTTCAAAGCACTGAAGCCAGG...TGTGTGGTTTGGGGTTAATGATGGAGGGAGACACCTCCTCATAGACGGCAGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000433259.6
CDS-3UTR CAA 90 bp TCAGAACACAGTTTCTACACAAGCACTTGGCACCCACACGACAGAGACGTCACTCTGCCTGTCAGGAAGTaGATGGTGATCCACGCCGAA +
Preference number: 5 (lower is better)
Translates to: SEHSFYTSTWHPHDRDVTLPVRK*MVIHAE
Trigger: TTCGGCGTGGATCACCATCAACTTCCTGACAGGCAG...AGTGACGTCTCTGTCGTGTGGGTGCCAAGTGCTTGTGTAGAAACTGTGTTCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CAA 90 bp CATTCATACCCAAGGAAGAGGCAAACACACTCAAGTCCAGAGTTCCCAGTGGTGCTGCCTGTCAGGAAGTaGATGGTGATCCACGCCGAA +
Preference number: 5 (lower is better)
Translates to: HSYPRKRQTHSSPEFPVVLPVRK*MVIHAE
Trigger: TTCGGCGTGGATCACCATCAACTTCCTGACAGGCAG...CACCACTGGGAACTCTGGACTTGAGTGTGTTTGCCTCTTCCTTGGGTATGAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CAA 90 bp AGGAGAAGCCCCTGTCAACCTTTTATTGGGAGTGGAACACATGAGGTTCAGCTCGTGAGCTTCAGCACTTaGCTCCTGGGAAAGCCGAAC +
Preference number: 5 (lower is better)
Translates to: RRSPCQPFIGSGTHEVQLVSFST*LLGKPN
Trigger: GTTCGGCTTTCCCAGGAGCAAAGTGCTGAAGCTCAC...GAGCTGAACCTCATGTGTTCCACTCCCAATAAAAGGTTGACAGGGGCTTCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CAA 90 bp GTAGCGATACATTCACAGGACACAGTTGGTGTCCAGAAAAGGGGGCTCAGAACAGTGAGCTTCAGCACTTaGCTCCTGGGAAAGCCGAAC +
Preference number: 5 (lower is better)
Translates to: VAIHSQDTVGVQKRGLRTVSFST*LLGKPN
Trigger: GTTCGGCTTTCCCAGGAGCAAAGTGCTGAAGCTCAC...TGTTCTGAGCCCCCTTTTCTGGACACCAACTGTGTCCTGTGAATGTATCGCTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CAA 90 bp TGGCTCCTCAGGATGAAGTCACGTCCAGGACAGGAGGGTTTATGCAGACACACATTTCTACACAAGCACTaGGCACCCACACGACAGAGA +
Preference number: 5 (lower is better)
Translates to: WLLRMKSRPGQEGLCRHTFLHKH*APTRQR
Trigger: TCTCTGTCGTGTGGGTGCCAAGTGCTTGTGTAGAAA...TGTGTGTCTGCATAAACCCTCCTGTCCTGGACGTGACTTCATCCTGAGGAGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CAA 90 bp CCACTGCTGTGTCCTCGAGAGGGATGTCGACAGGACTGGAAATACGCCACCCCCTTGGAAAACTTCCAGTaGTTTGCCTTTTTCAGGCAT +
Preference number: 5 (lower is better)
Translates to: PLLCPREGCRQDWKYATPLENFQ*FAFFRH
Trigger: ATGCCTGAAAAAGGCAAACAACTGGAAGTTTTCCAA...GGGGGTGGCGTATTTCCAGTCCTGTCGACATCCCTCTCGAGGACACAGCAGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000376652.9
CDS-3UTR CAA 90 bp GGAGAAGCCCCTGTCAACCTTTTATTGGGAGTGGAACACATGAGGTTCAGCTCGTTTCTACACAAGCACTaGGCACCCACACGACAGAGA +
Preference number: 5 (lower is better)
Translates to: GEAPVNLLLGVEHMRFSSFLHKH*APTRQR
Trigger: TCTCTGTCGTGTGGGTGCCAAGTGCTTGTGTAGAAA...CGAGCTGAACCTCATGTGTTCCACTCCCAATAAAAGGTTGACAGGGGCTTCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CAA 90 bp CAACCTTTTATTGGGAGTGGAACACATGAGGTTCAGCTCGTGCCGGGCACTGTATTTCTACACAAGCACTaGGCACCCACACGACAGAGA +
Preference number: 5 (lower is better)
Translates to: QPFIGSGTHEVQLVPGTVFLHKH*APTRQR
Trigger: TCTCTGTCGTGTGGGTGCCAAGTGCTTGTGTAGAAA...TACAGTGCCCGGCACGAGCTGAACCTCATGTGTTCCACTCCCAATAAAAGGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
CDS TCA 90 bp TTTCAACATCATCAGCATAGGCAGAAAGACCTGGCTTCAGTGCTTTaGAGGTTTCGTGGGTTAACGTGGGAGTTTCATGCACCGCGCGCT +
Preference number: 5 (lower is better)
Translates to: FQHHQHRQKDLASVL*RFRGLTWEFHAPRA
Trigger: AGCGCGCGGTGCATGAAACTCCCACGTTAACCCACGAAACCTTCAAAGCACTGAAGCCAGGTCTTTCTGCCTATGCTGATGATGTTGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427553.5
ENST00000433417.5
CDS-3UTR CAA 90 bp GTAGCGATACATTCACAGGACACAGTTGGTGTCCAGAAAAGGGGGCTCAGAACACGCAGGCTCCCGTGGTaGGATATTTTTCTCATCCTT +
Preference number: 5 (lower is better)
Translates to: VAIHSQDTVGVQKRGLRTRRLPW*DIFLIL
Trigger: AAGGATGAGAAAAATATCCAACCACGGGAGCCTGCG...TGTTCTGAGCCCCCTTTTCTGGACACCAACTGTGTCCTGTGAATGTATCGCTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000433259.6
CDS-3UTR CAA 90 bp TTCATACCCAAGGAAGAGGCAAACACACTCAAGTCCAGAGTTCCCAGTGGTGCCTGTTCCCACTCTCCTTaGAAACTGGGAGACAAGCAA +
Preference number: 5 (lower is better)
Translates to: FIPKEEANTLKSRVPSGACSHSP*KLGDKQ
Trigger: TTGCTTGTCTCCCAGTTTCAAAGGAGAGTGGGAACA...GGCACCACTGGGAACTCTGGACTTGAGTGTGTTTGCCTCTTCCTTGGGTATGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
CDS-3UTR CAA 90 bp AGGACTGGAAATACGCCACCCCCTTTGGCAGCTTTTCTAAGGTTTAGTAAACAGTGGCATGCGACACCTTaGGGACGCTTCCAGACCAAA +
Preference number: 5 (lower is better)
Translates to: RTGNTPPPLAAFLRFSKQWHATP*GRFQTK
Trigger: TTTGGTCTGGAAGCGTCCCAAAGGTGTCGCATGCCA...CTGTTTACTAAACCTTAGAAAAGCTGCCAAAGGGGGTGGCGTATTTCCAGTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376652.9
CDS GCA 90 bp CAGTTTCTTCAGGTTTTCAGTTCAAGTACACGGAAGGGTCATGAATaGAAATGCCTGCCATGCACGCTGTTTCCCAGAAACTGCTACGCG +
Preference number: 5 (lower is better)
Translates to: QFLQVFSSSTRKGHE*KCLPCTLFPRNCYA
Trigger: CGCGTAGCAGTTTCTGGGAAACAGCGTGCATGGCAGGCATTTGCATTCATGACCCTTCCGTGTACTTGAACTGAAAACCTGAAGAAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435520.5
CDS-3UTR CAA 90 bp CTGGACTCTTCTGTCTGTTCAGGGAGTCGATGTAATGAAAAATGGCCCCCAGAGCAGCTGGTCTCAACATaGTCAATTTTCCGAGTGAGC +
Preference number: 5 (lower is better)
Translates to: LDSSVCSGSRCNEKWPPEQLVST*SIFRVS
Trigger: GCTCACTCGGAAAATTGACAATGTTGAGACCAGCTG...CTCTGGGGGCCATTTTTCATTACATCGACTCCCTGAACAGACAGAAGAGTCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000376666.3
ENST00000433259.6
CDS-3UTR CAA 90 bp AGAGAAGGAGAAGCCCCTGTCAACCTTTTATTGGGAGTGGAACACATGAGGTTCTGTTCCCACTCTCCTTaGAAACTGGGAGACAAGCAA +
Preference number: 5 (lower is better)
Translates to: REGEAPVNLLLGVEHMRFCSHSP*KLGDKQ
Trigger: TTGCTTGTCTCCCAGTTTCAAAGGAGAGTGGGAACA...GAACCTCATGTGTTCCACTCCCAATAAAAGGTTGACAGGGGCTTCTCCTTCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
CDS TCA 90 bp CATAGCCCATTCCTCTTGGAAATACAGGGGCCATCTGATGTGGATTaGTGGCTGCCTAATCTGTTGGCCAGTTTCTTCAGGTTTTCAGTT +
Preference number: 5 (lower is better)
Translates to: HSPFLLEIQGPSDVD*WLPNLLASFFRFSV
Trigger: AACTGAAAACCTGAAGAAACTGGCCAACAGATTAGGCAGCCATCAATCCACATCAGATGGCCCCTGTATTTCCAAGAGGAATGGGCTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435520.5
CDS CCA 90 bp AAATACAGGGGCCATCTGATGTGGATTGATGGCTGCCTAATCTGTTaGCCAGTTTCTTCAGGTTTTCAGTTCAAGTACACGGAAGGGTCA +
Preference number: 5 (lower is better)
Translates to: KYRGHLMWIDGCLIC*PVSSGFQFKYTEGS
Trigger: TGACCCTTCCGTGTACTTGAACTGAAAACCTGAAGAAACTGGCCAACAGATTAGGCAGCCATCAATCCACATCAGATGGCCCCTGTATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435520.5
CDS CCA 90 bp GTGACAATCATGAACTTACTGGGACATCCCAGGGGAAATCACTCTTaGGGTTACCCTAGTAGCAGTAAAATGGCATCTGAGGAAGTGGAA +
Preference number: 5 (lower is better)
Translates to: VTIMNLLGHPRGNHS*GYPSSSKMASEEVE
Trigger: TTCCACTTCCTCAGATGCCATTTTACTGCTACTAGGGTAACCCCAAGAGTGATTTCCCCTGGGATGTCCCAGTAAGTTCATGATTGTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471478.1
CDS CCA 90 bp TTTTCTGGAAAGATGTACAAATTTGAGCTCTTTGGACCCACACATTaGGAAGGGCAACCAAGAGCAGGACATGTTCACCAAGGCTTGGCT +
Preference number: 5 (lower is better)
Translates to: FSGKMYKFELFGPTH*EGQPRAGHVHQGLA
Trigger: AGCCAAGCCTTGGTGAACATGTCCTGCTCTTGGTTGCCCTTCCCAATGTGTGGGTCCAAAGAGCTCAAATTTGTACATCTTTCCAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471478.1
CDS-3UTR CAA 90 bp GTAGCGATACATTCACAGGACACAGTTGGTGTCCAGAAAAGGGGGCTCAGAACATCAAGCAACCCTAGTTaGCTTCTTTTACGATGTGCA +
Preference number: 5 (lower is better)
Translates to: VAIHSQDTVGVQKRGLRTSSNPS*LLLRCA
Trigger: TGCACATCGTAAAAGAAGCAAACTAGGGTTGCTTGA...TGTTCTGAGCCCCCTTTTCTGGACACCAACTGTGTCCTGTGAATGTATCGCTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000376652.9
CDS CCA 90 bp ATTCACATAGCCCATTCCTCTTGGAAATACAGGGGCCATCTGATGTaGATTGATGGCTGCCTAATCTGTTGGCCAGTTTCTTCAGGTTTT +
Preference number: 5 (lower is better)
Translates to: IHIAHSSWKYRGHLM*IDGCLICWPVSSGF
Trigger: AAAACCTGAAGAAACTGGCCAACAGATTAGGCAGCCATCAATCCACATCAGATGGCCCCTGTATTTCCAAGAGGAATGGGCTATGTGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435520.5
CDS GCA 72 bp AGGCTGCCCCTCCACGCCGCCCAGGATCGCCAGGCGTaGCGACATCAGCCCGAGCCCGAGGTAGCTGTAGGA +
Preference number: 6 (lower is better)
Translates to: RLPLHAAQDRQA*RHQPEPEVAVG
Trigger: TCCTACAGCTACCTCGGGCTCGGGCTGATGTCGGCACGCCTGGCGATCCTGGGCGGCGTGGAGGGGCAGCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000425813.5
ENST00000433259.6
ENST00000433417.5
ENST00000439162.5
ENST00000447877.5
ENST00000471478.1
CDS CCA 72 bp CAGCACAGGCAGGTGGGCGGCAACCCCGGCTGCCACTaGGTCTGGGCTCCAAGGGGATTTGCACGCCTGGTG +
Preference number: 6 (lower is better)
Translates to: QHRQVGGNPGCH*VWAPRGFARLV
Trigger: CACCAGGCGTGCAAATCCCCTTGGAGCCCAGACCCAGTGGCAGCCGGGGTTGCCGCCCACCTGCCTGTGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490187.1
CDS TCA 72 bp CAGGAGCCAGGGCATTGTTGGTCCCGGCGCAGGGAGTaGAGACCGTGGGCACGAAGGCAGCGGCAGACCTGG +
Preference number: 6 (lower is better)
Translates to: QEPGHCWSRRRE*RPWARRQRQTW
Trigger: CCAGGTCTGCCGCTGCCTTCGTGCCCACGGTCTTCACTCCCTGCGCCGGGACCAACAATGCCCTGGCTCCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485936.5
CDS CCA 72 bp GGGTGCCCTCCACGCGTGGCAGGAAGGCGATCTGAGTaGATCCTCCGCCCAAGTCCAGCATGCCCACGCTGC +
Preference number: 6 (lower is better)
Translates to: GCPPRVAGRRSE*ILRPSPACPRC
Trigger: GCAGCGTGGGCATGCTGGACTTGGGCGGAGGATCCACTCAGATCGCCTTCCTGCCACGCGTGGAGGGCACCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000417467.5
ENST00000425813.5
ENST00000427553.5
ENST00000433259.6
ENST00000433417.5
ENST00000439162.5
ENST00000447877.5
ENST00000471478.1
CDS CCA 72 bp AGGCAGGTGGGCGGCAACCCCGGCTGCCACTGGGTCTaGGCTCCAAGGGGATTTGCACGCCTGGTGTTAGGG +
Preference number: 6 (lower is better)
Translates to: RQVGGNPGCHWV*APRGFARLVLG
Trigger: CCCTAACACCAGGCGTGCAAATCCCCTTGGAGCCCAGACCCAGTGGCAGCCGGGGTTGCCGCCCACCTGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490187.1
CDS CAA 90 bp GCTCCCCGCACAGGTCAAAAGCAGCCCTCAGGAGCCAGGGCATTGTaGGTCCCGGCGCAGGGAGTGAAGACCGTGGGCACGAAGGCAGCG +
Preference number: 6 (lower is better)
Translates to: APRTGQKQPSGARAL*VPAQGVKTVGTKAA
Trigger: CGCTGCCTTCGTGCCCACGGTCTTCACTCCCTGCGCCGGGACCAACAATGCCCTGGCTCCTGAGGGCTGCTTTTGACCTGTGCGGGGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485936.5
CDS TCA 72 bp TGCAGGGTGCCCTCCACGCGTGGCAGGAAGGCGATCTaGGTGGATCCTCCGCCCAAGTCCAGCATGCCCACG +
Preference number: 6 (lower is better)
Translates to: CRVPSTRGRKAI*VDPPPKSSMPT
Trigger: CGTGGGCATGCTGGACTTGGGCGGAGGATCCACTCAGATCGCCTTCCTGCCACGCGTGGAGGGCACCCTGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000417467.5
ENST00000425813.5
ENST00000427553.5
ENST00000433259.6
ENST00000433417.5
ENST00000439162.5
ENST00000447877.5
ENST00000471478.1
CDS TCA 72 bp CAGGAGCACTGTGAGGTTGGCGATGCCACTGAGACGTaGGGCTGGCACGGGGAACGCCAGCCCAAGAGCCCC +
Preference number: 6 (lower is better)
Translates to: QEHCEVGDATET*GWHGERQPKSP
Trigger: GGGGCTCTTGGGCTGGCGTTCCCCGTGCCAGCCTCACGTCTCAGTGGCATCGCCAACCTCACAGTGCTCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463734.1
CDS CAA 90 bp GCTGCTCCCCGCACAGGTCAAAAGCAGCCCTCAGGAGCCAGGGCATaGTTGGTCCCGGCGCAGGGAGTGAAGACCGTGGGCACGAAGGCA +
Preference number: 6 (lower is better)
Translates to: AAPRTGQKQPSGARA*LVPAQGVKTVGTKA
Trigger: TGCCTTCGTGCCCACGGTCTTCACTCCCTGCGCCGGGACCAACAATGCCCTGGCTCCTGAGGGCTGCTTTTGACCTGTGCGGGGAGCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485936.5
CDS TCA 72 bp GGCTCCGCACTCCGGATTCACAGACAAGGCCGCAGCTaGGCGCAGAAGGCACCCAGTGCACAGCACAGGCAG +
Preference number: 6 (lower is better)
Translates to: GSALRIHRQGRS*AQKAPSAQHRQ
Trigger: CTGCCTGTGCTGTGCACTGGGTGCCTTCTGCGCTCAGCTGCGGCCTTGTCTGTGAATCCGGAGTGCGGAGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490187.1
CDS CAA 72 bp CGCACAGGTCAAAAGCAGCCCTCAGGAGCCAGGGCATaGTTGGTCCCGGCGCAGGGAGTGAAGACCGTGGGC +
Preference number: 6 (lower is better)
Translates to: RTGQKQPSGARA*LVPAQGVKTVG
Trigger: GCCCACGGTCTTCACTCCCTGCGCCGGGACCAACAATGCCCTGGCTCCTGAGGGCTGCTTTTGACCTGTGCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485936.5
CDS CAA 90 bp CAATGGACCGTGTGGACATCTGAGGGCGCCTCTACACCCCACACCTaGACCCAGCTTCCCGGCTTTCCCAGTCCTCCTCCACCAGGCCCC +
Preference number: 6 (lower is better)
Translates to: QWTVWTSEGASTPHT*TQLPGFPSPPPPGP
Trigger: GGGGCCTGGTGGAGGAGGACTGGGAAAGCCGGGAAGCTGGGTCAAGGTGTGGGGTGTAGAGGCGCCCTCAGATGTCCACACGGTCCATTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481322.1
ENST00000485936.5
CDS GCA 72 bp ATAGATGAACACGCCCACACACAGCCCCAGGGGGTATaGCACCTTCGCCACCCGCAGGCTCCCGTGGTTGGA +
Preference number: 6 (lower is better)
Translates to: IDEHAHTQPQGV*HLRHPQAPVVG
Trigger: TCCAACCACGGGAGCCTGCGGGTGGCGAAGGTGGCATACCCCCTGGGGCTGTGTGTGGGCGTGTTCATCTAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000417467.5
ENST00000418890.5
ENST00000425813.5
ENST00000433259.6
ENST00000435520.5
ENST00000439162.5
CDS GCA 72 bp CCCCGGCTGCCACTGGGTCTGGGCTCCAAGGGGATTTaGACGCCTGGTGTTAGGGTCATGGGCCAATGTCTC +
Preference number: 6 (lower is better)
Translates to: PRLPLGLGSKGI*TPGVRVMGQCL
Trigger: GAGACATTGGCCCATGACCCTAACACCAGGCGTGCAAATCCCCTTGGAGCCCAGACCCAGTGGCAGCCGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490187.1
CDS CCA 72 bp CCCCCACCACCAGGCTGCCTCCCTTCTCCGCATCTGTaGGAGACACAACACCCAGTCTGCAGGAGCACTGTG +
Preference number: 6 (lower is better)
Translates to: PPPPGCLPSPHL*ETQHPVCRSTV
Trigger: CACAGTGCTCCTGCAGACTGGGTGTTGTGTCTCCCACAGATGCGGAGAAGGGAGGCAGCCTGGTGGTGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000463734.1
CDS CCA 72 bp GTGCAGACCCCAATTCCACCCACTACAGGCACCCGCTaGCTCCGCACTCCGGATTCACAGACAAGGCCGCAG +
Preference number: 6 (lower is better)
Translates to: VQTPIPPTTGTR*LRTPDSQTRPQ
Trigger: CTGCGGCCTTGTCTGTGAATCCGGAGTGCGGAGCCAGCGGGTGCCTGTAGTGGGTGGAATTGGGGTCTGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490187.1
CDS CAA 72 bp ACAGGTCAAAAGCAGCCCTCAGGAGCCAGGGCATTGTaGGTCCCGGCGCAGGGAGTGAAGACCGTGGGCACG +
Preference number: 6 (lower is better)
Translates to: TGQKQPSGARAL*VPAQGVKTVGT
Trigger: CGTGCCCACGGTCTTCACTCCCTGCGCCGGGACCAACAATGCCCTGGCTCCTGAGGGCTGCTTTTGACCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485936.5
CDS CAA 90 bp CGCCACCCGCAGGCTCCCGTGGTTGGATATTTTTCTCATCCTTGTTaGCCAAGGACCGTGCTGCGGCTGCATGCACCGCGCGCTCCGCCA +
Preference number: 6 (lower is better)
Translates to: RHPQAPVVGYFSHPC*PRTVLRLHAPRAPP
Trigger: TGGCGGAGCGCGCGGTGCATGCAGCCGCAGCACGGTCCTTGGCAAACAAGGATGAGAAAAATATCCAACCACGGGAGCCTGCGGGTGGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354989.9
ENST00000418890.5
CDS CAA 90 bp CGCCACCCGCAGGCTCCCGTGGTTGGATATTTTTCTCATCCTTGTTaGCCAAGGACCGTGCTGCGGCATGCACCGCGCGCTCCGCCACAC +
Preference number: 6 (lower is better)
Translates to: RHPQAPVVGYFSHPC*PRTVLRHAPRAPPH
Trigger: GTGTGGCGGAGCGCGCGGTGCATGCCGCAGCACGGTCCTTGGCAAACAAGGATGAGAAAAATATCCAACCACGGGAGCCTGCGGGTGGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000417467.5
ENST00000439162.5
CDS CAA 90 bp CCTTCGCCACCCGCAGGCTCCCGTGGTTGGATATTTTTCTCATCCTaGTTTGCCAAGGACCGTGCTGCGGCATGCACCGCGCGCTCCGCC +
Preference number: 6 (lower is better)
Translates to: PSPPAGSRGWIFFSS*FAKDRAAACTARSA
Trigger: GGCGGAGCGCGCGGTGCATGCCGCAGCACGGTCCTTGGCAAACAAGGATGAGAAAAATATCCAACCACGGGAGCCTGCGGGTGGCGAAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000417467.5
ENST00000439162.5
CDS CAA 90 bp CCTTCGCCACCCGCAGGCTCCCGTGGTTGGATATTTTTCTCATCCTaGTTTGCCAAGGACCGTGCTGCGGCTGCATGCACCGCGCGCTCC +
Preference number: 6 (lower is better)
Translates to: PSPPAGSRGWIFFSS*FAKDRAAAACTARS
Trigger: GGAGCGCGCGGTGCATGCAGCCGCAGCACGGTCCTTGGCAAACAAGGATGAGAAAAATATCCAACCACGGGAGCCTGCGGGTGGCGAAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354989.9
ENST00000418890.5
CDS TCA 72 bp CTCGTGCAGGCTTGCCGTTGCCAAGCTCCCATGGCTTaGGGGAGAACAGGAACAGAGGACCCCGGAGGCCAA +
Preference number: 6 (lower is better)
Translates to: LVQACRCQAPMA*GRTGTEDPGGQ
Trigger: TTGGCCTCCGGGGTCCTCTGTTCCTGTTCTCCCTCAAGCCATGGGAGCTTGGCAACGGCAAGCCTGCACGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481322.1
CDS GCA 72 bp GGCCCCGGTGTGTGCTGCTTGTGCGGCCTGGGGTGCTaGTGCTTCAGATCTGCGCAGTTTCTTGAAACCTCC +
Preference number: 6 (lower is better)
Translates to: GPGVCCLCGLGC*CFRSAQFLETS
Trigger: GGAGGTTTCAAGAAACTGCGCAGATCTGAAGCAGCAGCACCCCAGGCCGCACAAGCAGCACACACCGGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000481322.1
ENST00000485936.5
CDS GCA 72 bp GAGGGCCCCGGTGTGTGCTGCTTGTGCGGCCTGGGGTaGTGCTGCTTCAGATCTGCGCAGTTTCTTGAAACC +
Preference number: 6 (lower is better)
Translates to: EGPGVCCLCGLG*CCFRSAQFLET
Trigger: GGTTTCAAGAAACTGCGCAGATCTGAAGCAGCAGCACCCCAGGCCGCACAAGCAGCACACACCGGGGCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000481322.1
ENST00000485936.5
CDS CCA 72 bp ATGAGGGTGGGACAAGGACGGTGGTCCTTTCTCAGCTaGGGCCGAGGCCCCTGCCTGTGGCCATTGTTTAGG +
Preference number: 6 (lower is better)
Translates to: MRVGQGRWSFLS*GRGPCLWPLFR
Trigger: CCTAAACAATGGCCACAGGCAGGGGCCTCGGCCCCAGCTGAGAAAGGACCACCGTCCTTGTCCCACCCTCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471478.1
CDS CCA 72 bp CACAGCTCGTGCAGGCTTGCCGTTGCCAAGCTCCCATaGCTTGAGGGAGAACAGGAACAGAGGACCCCGGAG +
Preference number: 6 (lower is better)
Translates to: HSSCRLAVAKLP*LEGEQEQRTPE
Trigger: CTCCGGGGTCCTCTGTTCCTGTTCTCCCTCAAGCCATGGGAGCTTGGCAACGGCAAGCCTGCACGAGCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481322.1
CDS CAA 72 bp CTGCTGAGATGGCCCCTGCAGCATCACTCACCGTACTaGGCTGCGATCTCGAAGTCCCCCACCACCAGGCTG +
Preference number: 6 (lower is better)
Translates to: LLRWPLQHHSPY*AAISKSPTTRL
Trigger: CAGCCTGGTGGTGGGGGACTTCGAGATCGCAGCCAAGTACGGTGAGTGATGCTGCAGGGGCCATCTCAGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471478.1
CDS CAA 90 bp TTTGAAGGACCTCTGACACTCTGGCAGCACACAGCTCGTGCAGGCTaGCCGCTGGGGACAAGCACAAGGCTAGCGGTCAGTGGGCTCCGA +
Preference number: 6 (lower is better)
Translates to: FEGPLTLWQHTARAG*PLGTSTRLAVSGLR
Trigger: TCGGAGCCCACTGACCGCTAGCCTTGTGCTTGTCCCCAGCGGCAAGCCTGCACGAGCTGTGTGCTGCCAGAGTGTCAGAGGTCCTTCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485936.5
CDS GCA 72 bp AGGCGATCTGAGTGGATCCTCCGCCCAAGTCCAGCATaGCCACGCTGCTCCCTCCTGGAGTTTTCAAGCTGC +
Preference number: 6 (lower is better)
Translates to: RRSEWILRPSPA*PRCSLLEFSSC
Trigger: GCAGCTTGAAAACTCCAGGAGGGAGCAGCGTGGGCATGCTGGACTTGGGCGGAGGATCCACTCAGATCGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000417467.5
ENST00000425813.5
ENST00000427553.5
ENST00000433259.6
ENST00000433417.5
ENST00000439162.5
ENST00000447877.5
ENST00000471478.1
CDS GCA 72 bp CCCGGTGTGTGCTGCTTGTGCGGCCTGGGGTGCTGCTaGTTCAGATCTGCGCAGTTTCTTGAAACCTCCTCC +
Preference number: 6 (lower is better)
Translates to: PGVCCLCGLGCC*FRSAQFLETSS
Trigger: GGAGGAGGTTTCAAGAAACTGCGCAGATCTGAAGCAGCAGCACCCCAGGCCGCACAAGCAGCACACACCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481322.1
ENST00000485936.5
CDS CCA 72 bp AGGAAGTGGAGGCCCAGCTCACTTGCCAAGCTCCCATaGCTTGAGGGAGAACAGGAACAGAGGACCCCGGAG +
Preference number: 6 (lower is better)
Translates to: RKWRPSSLAKLP*LEGEQEQRTPE
Trigger: CTCCGGGGTCCTCTGTTCCTGTTCTCCCTCAAGCCATGGGAGCTTGGCAAGTGAGCTGGGCCTCCACTTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485936.5
CDS CCA 72 bp TCCTGTGCACTCTGTTTTGAAGGACCTCTGACACTCTaGCAGCACACAGCTCGTGCAGGCTTGCCGCTGGGG +
Preference number: 6 (lower is better)
Translates to: SCALCFEGPLTL*QHTARAGLPLG
Trigger: CCCCAGCGGCAAGCCTGCACGAGCTGTGTGCTGCCAGAGTGTCAGAGGTCCTTCAAAACAGAGTGCACAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485936.5
CDS CAA 72 bp CCCGCAGGCTCCCGTGGTTGGATATTTTTCTCATCCTaGTTTGCCAAGGACCGTGCTGCGGCATGCACCGCG +
Preference number: 6 (lower is better)
Translates to: PAGSRGWIFFSS*FAKDRAAACTA
Trigger: CGCGGTGCATGCCGCAGCACGGTCCTTGGCAAACAAGGATGAGAAAAATATCCAACCACGGGAGCCTGCGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000417467.5
ENST00000439162.5
CDS CAA 72 bp GAAGGGCAACCAAGAGCAGGACATGTTCACCAAGGCTaGGCTGCTGGGCCAGGCGTGAAGGAGACAGTGGAG +
Preference number: 6 (lower is better)
Translates to: EGQPRAGHVHQG*AAGPGVKETVE
Trigger: CTCCACTGTCTCCTTCACGCCTGGCCCAGCAGCCAAGCCTTGGTGAACATGTCCTGCTCTTGGTTGCCCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471478.1
CDS CAA 90 bp ACAGCTGCGATCGCCCTCTCAGATCCCCGCCCCGTGTTATTTCTCTaGGAAGGCTTTCCCGATGAGCTTCACTGTCTGGCTCCTCCTGTG +
Preference number: 6 (lower is better)
Translates to: TAAIALSDPRPVLFL*EGFPDELHCLAPPV
Trigger: CACAGGAGGAGCCAGACAGTGAAGCTCATCGGGAAAGCCTTCCAAGAGAAATAACACGGGGCGGGGATCTGAGAGGGCGATCGCAGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485936.5
CDS CAA 90 bp GCTTGTGCGGCCTGGGGTGCTGCTGCTTCAGATCTGCGCAGTTTCTaGAAACCTCCTCCTGTCTTAGATCCCATGTTACCCCACGAGGCC +
Preference number: 6 (lower is better)
Translates to: ACAAWGAAASDLRSF*KPPPVLDPMLPHEA
Trigger: GGCCTCGTGGGGTAACATGGGATCTAAGACAGGAGGAGGTTTCAAGAAACTGCGCAGATCTGAAGCAGCAGCACCCCAGGCCGCACAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485936.5
CDS TCA 72 bp TTTCTCCAGGTAACAGGCGTAAGCCAGCTGTGGCCTTaGGGACCAGAGGGGTGGCCTTCCAGAAGTCGAACG +
Preference number: 6 (lower is better)
Translates to: FLQVTGVSQLWP*GPEGWPSRSRT
Trigger: CGTTCGACTTCTGGAAGGCCACCCCTCTGGTCCTCAAGGCCACAGCTGGCTTACGCCTGTTACCTGGAGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000433259.6
ENST00000433417.5
ENST00000439162.5
ENST00000447877.5
CDS TCA 72 bp AAGTGGAATCGAGGGACCCAGTTCCTCACGACCCCATaGGGGTGGGACAAGGACGGTGGTCCTTTCTCAGCT +
Preference number: 6 (lower is better)
Translates to: KWNRGTQFLTTP*GWDKDGGPFSA
Trigger: AGCTGAGAAAGGACCACCGTCCTTGTCCCACCCTCATGGGGTCGTGAGGAACTGGGTCCCTCGATTCCACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471478.1
CDS GCA 72 bp CCTTCTCCGCATCTGTGGGAGACACAACACCCAGTCTaGAGGAGCACTGTGAGGTTGGCGATGCCACTGAGA +
Preference number: 6 (lower is better)
Translates to: PSPHLWETQHPV*RSTVRLAMPLR
Trigger: TCTCAGTGGCATCGCCAACCTCACAGTGCTCCTGCAGACTGGGTGTTGTGTCTCCCACAGATGCGGAGAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463734.1
CDS GCA 72 bp CGAGTGCTTCCAGGGTTCCCACGGTCCACAGACCCATaGTCCAACCCTTCGATCTCATTTCCTCCTGGTGTC +
Preference number: 6 (lower is better)
Translates to: RVLPGFPRSTDP*SNPSISFPPGV
Trigger: GACACCAGGAGGAAATGAGATCGAAGGGTTGGAGCATGGGTCTGTGGACCGTGGGAACCCTGGAAGCACTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481322.1
ENST00000485936.5
CDS GCA 72 bp ATTGACTTGGAAGGACCTGAACGGTTCGCGAAGGCATaGACCCCTCATGCCGAGTGCCCAGTCTGGGAATGG +
Preference number: 6 (lower is better)
Translates to: IDLEGPERFAKA*TPHAECPVWEW
Trigger: CCATTCCCAGACTGGGCACTCGGCATGAGGGGTGCATGCCTTCGCGAACCGTTCAGGTCCTTCCAAGTCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485936.5
CDS CCA 72 bp TCCTGTGCACTCTGTTTTGAAGGACCTCTGACACTCTaGCAGCACACAGCTCGTGCAGGCTTGCCGCAGGCT +
Preference number: 6 (lower is better)
Translates to: SCALCFEGPLTL*QHTARAGLPQA
Trigger: AGCCTGCGGCAAGCCTGCACGAGCTGTGTGCTGCCAGAGTGTCAGAGGTCCTTCAAAACAGAGTGCACAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000433259.6
ENST00000447877.5
ENST00000471478.1
CDS CAA 72 bp CAGGCTCCCGTGGTTGGATATTTTTCTCATCCTTGTTaGCCAAGGACCGTGCTGCGGCTGCATGCACCGCGC +
Preference number: 6 (lower is better)
Translates to: QAPVVGYFSHPC*PRTVLRLHAPR
Trigger: GCGCGGTGCATGCAGCCGCAGCACGGTCCTTGGCAAACAAGGATGAGAAAAATATCCAACCACGGGAGCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354989.9
ENST00000418890.5
CDS CAA 72 bp CCCGCAGGCTCCCGTGGTTGGATATTTTTCTCATCCTaGTTTGCCAAGGACCGTGCTGCGGCTGCATGCACC +
Preference number: 6 (lower is better)
Translates to: PAGSRGWIFFSS*FAKDRAAAACT
Trigger: GGTGCATGCAGCCGCAGCACGGTCCTTGGCAAACAAGGATGAGAAAAATATCCAACCACGGGAGCCTGCGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354989.9
ENST00000418890.5
CDS CAA 72 bp CAGGCTCCCGTGGTTGGATATTTTTCTCATCCTTGTTaGCCAAGGACCGTGCTGCGGCATGCACCGCGCGCT +
Preference number: 6 (lower is better)
Translates to: QAPVVGYFSHPC*PRTVLRHAPRA
Trigger: AGCGCGCGGTGCATGCCGCAGCACGGTCCTTGGCAAACAAGGATGAGAAAAATATCCAACCACGGGAGCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000417467.5
ENST00000439162.5
CDS TCA 72 bp TTCCTCCGTCCTGTGCACTCTGTTTTGAAGGACCTCTaGCACTCTGGCAGCACACAGCTCGTGCAGGCTTGC +
Preference number: 6 (lower is better)
Translates to: FLRPVHSVLKDL*HSGSTQLVQAC
Trigger: GCAAGCCTGCACGAGCTGTGTGCTGCCAGAGTGTCAGAGGTCCTTCAAAACAGAGTGCACAGGACGGAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
ENST00000433417.5
ENST00000447877.5
ENST00000471478.1
ENST00000485936.5
CDS CCA 72 bp TCCTGTGCACTCTGTTTTGAAGGACCTCTGACACTCTaGCAGCACACAGCTCGTGCAGGCTTGCCGCTGCTT +
Preference number: 6 (lower is better)
Translates to: SCALCFEGPLTL*QHTARAGLPLL
Trigger: AAGCAGCGGCAAGCCTGCACGAGCTGTGTGCTGCCAGAGTGTCAGAGGTCCTTCAAAACAGAGTGCACAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433417.5
CDS CCA 72 bp TTCTCTTGGAAGGCTTTCCCGATGAGCTTCACTGTCTaGCTCCTCCTGTGGGACACAGCTGTGCAGTCCTGC +
Preference number: 6 (lower is better)
Translates to: FSWKAFPMSFTV*LLLWDTAVQSC
Trigger: GCAGGACTGCACAGCTGTGTCCCACAGGAGGAGCCAGACAGTGAAGCTCATCGGGAAAGCCTTCCAAGAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485936.5
CDS CAA 72 bp GGGTATGCCACCTTCGCCACCCGCAGGCTCCCGTGGTaGGATATTTTTCTCATCCTTGTTTGCCAAGGACCG +
Preference number: 6 (lower is better)
Translates to: GYATFATRRLPW*DIFLILVCQGP
Trigger: CGGTCCTTGGCAAACAAGGATGAGAAAAATATCCAACCACGGGAGCCTGCGGGTGGCGAAGGTGGCATACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000417467.5
ENST00000418890.5
ENST00000425813.5
ENST00000433259.6
ENST00000435520.5
ENST00000439162.5
CDS CAA 90 bp CCTTCGCCACCCGCAGGCTCCCGTGGTTGGATATTTTTCTCATCCTaGTTTGCCAAGGACCGTGCTGCGGCTGCTGAAAAATGTAGCTCG +
Preference number: 6 (lower is better)
Translates to: PSPPAGSRGWIFFSS*FAKDRAAAAEKCSS
Trigger: CGAGCTACATTTTTCAGCAGCCGCAGCACGGTCCTTGGCAAACAAGGATGAGAAAAATATCCAACCACGGGAGCCTGCGGGTGGCGAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000376652.9
ENST00000425813.5
ENST00000433259.6
CDS GCA 72 bp GAACTGGAAGACGTGTACTCGGGTGCCAGTGCTTCCTaGATCAAACATGATCCCGTAGAAGACCTCGTGCCC +
Preference number: 6 (lower is better)
Translates to: ELEDVYSGASAS*IKHDPVEDLVP
Trigger: GGGCACGAGGTCTTCTACGGGATCATGTTTGATGCAGGAAGCACTGGCACCCGAGTACACGTCTTCCAGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000417467.5
ENST00000418890.5
ENST00000425813.5
ENST00000433259.6
ENST00000435520.5
ENST00000439162.5
CDS CCA 72 bp AGGGGGTATGCCACCTTCGCCACCCGCAGGCTCCCGTaGTTGGATATTTTTCTCATCCTTGTTTGCCAAGGA +
Preference number: 6 (lower is better)
Translates to: RGYATFATRRLP*LDIFLILVCQG
Trigger: TCCTTGGCAAACAAGGATGAGAAAAATATCCAACCACGGGAGCCTGCGGGTGGCGAAGGTGGCATACCCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000417467.5
ENST00000418890.5
ENST00000425813.5
ENST00000433259.6
ENST00000435520.5
ENST00000439162.5
CDS CCA 72 bp GCAGAAAGACCTGGCTTCAGTGCTTTGAAGGTTTCGTaGGTTAACGTGGGAGTTTCATGCACCGCGCGCTCC +
Preference number: 6 (lower is better)
Translates to: AERPGFSALKVS*VNVGVSCTARS
Trigger: GGAGCGCGCGGTGCATGAAACTCCCACGTTAACCCACGAAACCTTCAAAGCACTGAAGCCAGGTCTTTCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427553.5
ENST00000433417.5
CDS CAA 72 bp ATCGCCCTCTCAGATCCCCGCCCCGTGTTATTTCTCTaGGAAGGCTTTCCCGATGAGCTTCACTGTCTGGCT +
Preference number: 6 (lower is better)
Translates to: IALSDPRPVLFL*EGFPDELHCLA
Trigger: AGCCAGACAGTGAAGCTCATCGGGAAAGCCTTCCAAGAGAAATAACACGGGGCGGGGATCTGAGAGGGCGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485936.5
CDS CAA 72 bp CCCGCAGGCTCCCGTGGTTGGATATTTTTCTCATCCTaGTTTGCCAAGGACCGTGCTGCGGCTGCTGAAAAA +
Preference number: 6 (lower is better)
Translates to: PAGSRGWIFFSS*FAKDRAAAAEK
Trigger: TTTTTCAGCAGCCGCAGCACGGTCCTTGGCAAACAAGGATGAGAAAAATATCCAACCACGGGAGCCTGCGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000376652.9
ENST00000425813.5
ENST00000433259.6
CDS CAA 72 bp GCCTGGGGTGCTGCTGCTTCAGATCTGCGCAGTTTCTaGAAACCTCCTCCTGTCTTAGATCCCATGTTACCC +
Preference number: 6 (lower is better)
Translates to: AWGAAASDLRSF*KPPPVLDPMLP
Trigger: GGGTAACATGGGATCTAAGACAGGAGGAGGTTTCAAGAAACTGCGCAGATCTGAAGCAGCAGCACCCCAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485936.5
CDS CAA 90 bp CCTTCGCCACCCGCAGGCTCCCGTGGTTGGATATTTTTCTCATCCTaGTTTGCCAAGGACCGTGCTGCGGCTGAAAAATGTAGCTCGTTT +
Preference number: 6 (lower is better)
Translates to: PSPPAGSRGWIFFSS*FAKDRAAAEKCSSF
Trigger: AAACGAGCTACATTTTTCAGCCGCAGCACGGTCCTTGGCAAACAAGGATGAGAAAAATATCCAACCACGGGAGCCTGCGGGTGGCGAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000360031.6
ENST00000435520.5
CDS CAA 90 bp TGCCCTGAAACCCTGTACGTGACTTCTGCGTGTTCCCACTCTCCTTaGAAACTGGGAGACAAGCAAGGGCTGACCAACTCCTTTCCATCC +
Preference number: 6 (lower is better)
Translates to: CPETLYVTSACSHSP*KLGDKQGLTNSFPS
Trigger: GGATGGAAAGGAGTTGGTCAGCCCTTGCTTGTCTCCCAGTTTCAAAGGAGAGTGGGAACACGCAGAAGTCACGTACAGGGTTTCAGGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000425813.5
ENST00000433417.5
CDS CAA 90 bp CGCCACCCGCAGGCTCCCGTGGTTGGATATTTTTCTCATCCTTGTTaGCCAAGGACCGTGCTGCGGCTGCTGAAAAATGTAGCTCGTTTT +
Preference number: 6 (lower is better)
Translates to: RHPQAPVVGYFSHPC*PRTVLRLLKNVARF
Trigger: AAAACGAGCTACATTTTTCAGCAGCCGCAGCACGGTCCTTGGCAAACAAGGATGAGAAAAATATCCAACCACGGGAGCCTGCGGGTGGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000376652.9
ENST00000425813.5
ENST00000433259.6
CDS TCA 72 bp CACCAAAGCCAGCTCAGAACAATCCACTCCTGCTCTTaGGGAAGGACAAATCCACCAAGAGCTGTCCTGGGA +
Preference number: 6 (lower is better)
Translates to: HQSQLRTIHSCS*GRTNPPRAVLG
Trigger: TCCCAGGACAGCTCTTGGTGGATTTGTCCTTCCTCAAGAGCAGGAGTGGATTGTTCTGAGCTGGCTTTGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490187.1
CDS CCA 72 bp GCTCCAAGGGGATTTGCACGCCTGGTGTTAGGGTCATaGGCCAATGTCTCCCAAGCCACATTTCTACATCTA +
Preference number: 6 (lower is better)
Translates to: APRGFARLVLGS*ANVSQATFLHL
Trigger: TAGATGTAGAAATGTGGCTTGGGAGACATTGGCCCATGACCCTAACACCAGGCGTGCAAATCCCCTTGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490187.1
CDS CAA 72 bp CCCGCAGGCTCCCGTGGTTGGATATTTTTCTCATCCTaGTTTGCCAAGGACCGTGCTGCGGCTGAAAAATGT +
Preference number: 6 (lower is better)
Translates to: PAGSRGWIFFSS*FAKDRAAAEKC
Trigger: ACATTTTTCAGCCGCAGCACGGTCCTTGGCAAACAAGGATGAGAAAAATATCCAACCACGGGAGCCTGCGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000360031.6
ENST00000435520.5
CDS GCA 72 bp AAGAGCTGTCCTGGGATTCTGCTCAAAGCCTTTTCCTaGTGTAGTTGTGGATACCCAGTGTCCATGGGCACA +
Preference number: 6 (lower is better)
Translates to: KSCPGILLKAFS*CSCGYPVSMGT
Trigger: TGTGCCCATGGACACTGGGTATCCACAACTACAGCAGGAAAAGGCTTTGAGCAGAATCCCAGGACAGCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490187.1
CDS TCA 72 bp CATCAGCATAGGCAGAAAGACCTGGCTTCAGTGCTTTaGAGGTTTCGTGGGTTAACGTGGGAGTTTCTCTGG +
Preference number: 6 (lower is better)
Translates to: HQHRQKDLASVL*RFRGLTWEFLW
Trigger: CCAGAGAAACTCCCACGTTAACCCACGAAACCTTCAAAGCACTGAAGCCAGGTCTTTCTGCCTATGCTGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000417467.5
ENST00000418890.5
ENST00000425813.5
ENST00000433259.6
ENST00000435520.5
ENST00000439162.5
ENST00000447877.5
CDS GCA 72 bp GGAAGGACAAATCCACCAAGAGCTGTCCTGGGATTCTaGTCAAAGCCTTTTCCTGCTGTAGTTGTGGATACC +
Preference number: 6 (lower is better)
Translates to: GRTNPPRAVLGF*SKPFPAVVVDT
Trigger: GGTATCCACAACTACAGCAGGAAAAGGCTTTGAGCAGAATCCCAGGACAGCTCTTGGTGGATTTGTCCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490187.1
CDS CCA 72 bp GCCCATTCCTCTTGGAAATACAGGGGCCATCTGATGTaGATTGATGGCTGCCTAATCTGTTGGCCAGTTTCT +
Preference number: 6 (lower is better)
Translates to: AHSSWKYRGHLM*IDGCLICWPVS
Trigger: AGAAACTGGCCAACAGATTAGGCAGCCATCAATCCACATCAGATGGCCCCTGTATTTCCAAGAGGAATGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435520.5
CDS CAA 72 bp CAGGCTCCCGTGGTTGGATATTTTTCTCATCCTTGTTaGCCAAGGACCGTGCTGCGGCTGAAAAATGTAGCT +
Preference number: 6 (lower is better)
Translates to: QAPVVGYFSHPC*PRTVLRLKNVA
Trigger: AGCTACATTTTTCAGCCGCAGCACGGTCCTTGGCAAACAAGGATGAGAAAAATATCCAACCACGGGAGCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000360031.6
ENST00000435520.5
CDS CAA 72 bp CAGGCTCCCGTGGTTGGATATTTTTCTCATCCTTGTTaGCCAAGGACCGTGCTGCGGCTGCTGAAAAATGTA +
Preference number: 6 (lower is better)
Translates to: QAPVVGYFSHPC*PRTVLRLLKNV
Trigger: TACATTTTTCAGCAGCCGCAGCACGGTCCTTGGCAAACAAGGATGAGAAAAATATCCAACCACGGGAGCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000376652.9
ENST00000425813.5
ENST00000433259.6
CDS TCA 72 bp CATCAGCATAGGCAGAAAGACCTGGCTTCAGTGCTTTaGAGGTTTCGTGGGTTAACGTGGGAGTTTCATGCA +
Preference number: 6 (lower is better)
Translates to: HQHRQKDLASVL*RFRGLTWEFHA
Trigger: TGCATGAAACTCCCACGTTAACCCACGAAACCTTCAAAGCACTGAAGCCAGGTCTTTCTGCCTATGCTGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427553.5
ENST00000433417.5
CDS TCA 72 bp TTCCTCTTGGAAATACAGGGGCCATCTGATGTGGATTaGTGGCTGCCTAATCTGTTGGCCAGTTTCTTCAGG +
Preference number: 6 (lower is better)
Translates to: FLLEIQGPSDVD*WLPNLLASFFR
Trigger: CCTGAAGAAACTGGCCAACAGATTAGGCAGCCATCAATCCACATCAGATGGCCCCTGTATTTCCAAGAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435520.5
CDS GCA 72 bp TTCAGTTCAAGTACACGGAAGGGTCATGAATGCAAATaGCTGCCATGCACGCTGTTTCCCAGAAACTGCTAC +
Preference number: 6 (lower is better)
Translates to: FSSSTRKGHECK*LPCTLFPRNCY
Trigger: GTAGCAGTTTCTGGGAAACAGCGTGCATGGCAGGCATTTGCATTCATGACCCTTCCGTGTACTTGAACTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435520.5
CDS GCA 72 bp CAGGTTTTCAGTTCAAGTACACGGAAGGGTCATGAATaGAAATGCCTGCCATGCACGCTGTTTCCCAGAAAC +
Preference number: 6 (lower is better)
Translates to: QVFSSSTRKGHE*KCLPCTLFPRN
Trigger: GTTTCTGGGAAACAGCGTGCATGGCAGGCATTTGCATTCATGACCCTTCCGTGTACTTGAACTGAAAACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435520.5
CDS CCA 72 bp TCTTCTGTCTGTTCAGGGAGTCGATGTAATGAAAAATaGCCCCCAGAGCCCAGCTGGTCTCAACATTGTCAA +
Preference number: 6 (lower is better)
Translates to: SSVCSGSRCNEK*PPEPSWSQHCQ
Trigger: TTGACAATGTTGAGACCAGCTGGGCTCTGGGGGCCATTTTTCATTACATCGACTCCCTGAACAGACAGAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000354989.9
ENST00000360031.6
ENST00000376652.9
ENST00000376666.3
ENST00000433259.6
ENST00000463734.1
ENST00000485936.5
ENST00000490187.1
CDS CCA 72 bp AATGTCTCCCAAGCCACATTTCTACATCTAAGACCCTaGACACCTCTCCCAGGTGTCAAGCTGCATAAAACC +
Preference number: 6 (lower is better)
Translates to: NVSQATFLHLRP*TPLPGVKLHKT
Trigger: GGTTTTATGCAGCTTGACACCTGGGAGAGGTGTCCAGGGTCTTAGATGTAGAAATGTGGCTTGGGAGACATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490187.1
CDS CCA 72 bp GGCCATCTGATGTGGATTGATGGCTGCCTAATCTGTTaGCCAGTTTCTTCAGGTTTTCAGTTCAAGTACACG +
Preference number: 6 (lower is better)
Translates to: GHLMWIDGCLIC*PVSSGFQFKYT
Trigger: CGTGTACTTGAACTGAAAACCTGAAGAAACTGGCCAACAGATTAGGCAGCCATCAATCCACATCAGATGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435520.5
CDS CCA 72 bp ATGAACTTACTGGGACATCCCAGGGGAAATCACTCTTaGGGTTACCCTAGTAGCAGTAAAATGGCATCTGAG +
Preference number: 6 (lower is better)
Translates to: MNLLGHPRGNHS*GYPSSSKMASE
Trigger: CTCAGATGCCATTTTACTGCTACTAGGGTAACCCCAAGAGTGATTTCCCCTGGGATGTCCCAGTAAGTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471478.1
CDS CAA 90 bp GGAAGGGTAGTACTTTTTCTGGAAAGATGTACAAATTTGAGCTCTTaGGACCCACACATTGGGAAGGGCAACCAAGAGCAGGACATGTTC +
Preference number: 6 (lower is better)
Translates to: GRVVLFLERCTNLSS*DPHIGKGNQEQDMF
Trigger: GAACATGTCCTGCTCTTGGTTGCCCTTCCCAATGTGTGGGTCCAAAGAGCTCAAATTTGTACATCTTTCCAGAAAAAGTACTACCCTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000471478.1
CDS CCA 72 bp AAGATGTACAAATTTGAGCTCTTTGGACCCACACATTaGGAAGGGCAACCAAGAGCAGGACATGTTCACCAA +
Preference number: 6 (lower is better)
Translates to: KMYKFELFGPTH*EGQPRAGHVHQ
Trigger: TTGGTGAACATGTCCTGCTCTTGGTTGCCCTTCCCAATGTGTGGGTCCAAAGAGCTCAAATTTGTACATCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471478.1
CDS CAA 72 bp GTACTTTTTCTGGAAAGATGTACAAATTTGAGCTCTTaGGACCCACACATTGGGAAGGGCAACCAAGAGCAG +
Preference number: 6 (lower is better)
Translates to: VLFLERCTNLSS*DPHIGKGNQEQ
Trigger: CTGCTCTTGGTTGCCCTTCCCAATGTGTGGGTCCAAAGAGCTCAAATTTGTACATCTTTCCAGAAAAAGTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000471478.1
CDS CAA 72 bp GGAAGGGTAGTACTTTTTCTGGAAAGATGTACAAATTaGAGCTCTTTGGACCCACACATTGGGAAGGGCAAC +
Preference number: 6 (lower is better)
Translates to: GRVVLFLERCTN*SSLDPHIGKGN
Trigger: GTTGCCCTTCCCAATGTGTGGGTCCAAAGAGCTCAAATTTGTACATCTTTCCAGAAAAAGTACTACCCTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000471478.1