RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ENTPD5 (Homo sapiens)

Ensembl gene IDs: ENSG00000187097

Ensembl transcript IDs: ENST00000334696.11, ENST00000553284.5, ENST00000554664.5, ENST00000555829.5, ENST00000556242.5, ENST00000557325.5

Found 508 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TTCCTCTTGGGTTGGGACATGCTGCTGAGTACGTCAGGCCTCGGGTaGCGCTCATTGGGTAAGACGATAACAGAGCAGGGCCACTCCCTT +
Preference number: 1 (lower is better)
Translates to: FLLGWDMLLSTSGLG*RSLGKTITEQGHSL
Trigger: AAGGGAGTGGCCCTGCTCTGTTATCGTCTTACCCAATGAGCGCCACCCGAGGCCTGACGTACTCAGCAGCATGTCCCAACCCAAGAGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555829.5
3UTR TCA 90 bp TCTTCCCTCTGGGCCTATTGCTCTGCTCCCGGTAAGAGGTCCTTCTaGCCAGTCCGCCCACATGCATGCAAGCCTTTCCTCTTCACTTTC +
Preference number: 1 (lower is better)
Translates to: SSLWAYCSAPGKRSF*PVRPHACKPFLFTF
Trigger: GAAAGTGAAGAGGAAAGGCTTGCATGCATGTGGGCGGACTGGTCAGAAGGACCTCTTACCGGGAGCAGAGCAATAGGCCCAGAGGGAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557325.5
3UTR GCA 90 bp GGCCACTCCCTTCTCACTTTGCTGCCAGAGGTCACACCTGAACTCTaGTTTATTCTTAGGGATGCAGCCCACAGAGTCCATCCGCTTGCA +
Preference number: 1 (lower is better)
Translates to: GHSLLTLLPEVTPEL*FILRDAAHRVHPLA
Trigger: TGCAAGCGGATGGACTCTGTGGGCTGCATCCCTAAGAATAAAGCAGAGTTCAGGTGTGACCTCTGGCAGCAAAGTGAGAAGGGAGTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555829.5
3UTR CCA 90 bp GACCGAGTGACGGTTCTCTACAGGAGCAAAGCCATTCGCTATACCTaGCCTTGTCCATTTCCTATGGCCGACTCCAGCCCTTGGGTTCAT +
Preference number: 1 (lower is better)
Translates to: DRVTVLYRSKAIRYT*PCPFPMADSSPWVH
Trigger: ATGAACCCAAGGGCTGGAGTCGGCCATAGGAAATGGACAAGGCCAGGTATAGCGAATGGCTTTGCTCCTGTAGAGAACCGTCACTCGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557325.5
3UTR GCA 90 bp AAGAGGCTGGAAGACTTAGCAGGCTCATGTGTCCATGCAGATAGGTaGAGATGGTCACAACTCCGGAGTACGGCAGGCTGTTGGAATCCA +
Preference number: 1 (lower is better)
Translates to: KRLEDLAGSCVHADR*RWSQLRSTAGCWNP
Trigger: TGGATTCCAACAGCCTGCCGTACTCCGGAGTTGTGACCATCTGCACCTATCTGCATGGACACATGAGCCTGCTAAGTCTTCCAGCCTCTT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557325.5
3UTR CCA 90 bp CGCTATACCTGGCCTTGTCCATTTCCTATGGCCGACTCCAGCCCTTaGGTTCATATTACCCTAGGTGATGGCAGCACCTTCCAGACCAAA +
Preference number: 1 (lower is better)
Translates to: RYTWPCPFPMADSSP*VHITLGDGSTFQTK
Trigger: TTTGGTCTGGAAGGTGCTGCCATCACCTAGGGTAATATGAACCCAAGGGCTGGAGTCGGCCATAGGAAATGGACAAGGCCAGGTATAGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557325.5
3UTR CCA 90 bp CTACTCACATTTCACCTTGTTTGTCTTGTGGCTGATGCTGCTCAGTaGAGTGATGCTGACCACACGGACTTCATCGACACAGCTGGTGCC +
Preference number: 1 (lower is better)
Translates to: LLTFHLVCLVADAAQ*SDADHTDFIDTAGA
Trigger: GGCACCAGCTGTGTCGATGAAGTCCGTGTGGTCAGCATCACTCCACTGAGCAGCATCAGCCACAAGACAAACAAGGTGAAATGTGAGTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555829.5
3UTR CCA 90 bp CTGGAAGACTTAGCAGGCTCATGTGTCCATGCAGATAGGTGCAGATaGTCACAACTCCGGAGTACGGCAGGCTGTTGGAATCCAGAATGT +
Preference number: 1 (lower is better)
Translates to: LEDLAGSCVHADRCR*SQLRSTAGCWNPEC
Trigger: ACATTCTGGATTCCAACAGCCTGCCGTACTCCGGAGTTGTGACCATCTGCACCTATCTGCATGGACACATGAGCCTGCTAAGTCTTCCAG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557325.5
3UTR TCA 90 bp AGACCACAGGGAGATCTTCCAGGTCCAAGAGCACTGCAGGGCAGATaGGAAGCAGGGATGATTATGTTGAAAGTGCAAGATAAGGCCAGG +
Preference number: 1 (lower is better)
Translates to: RPQGDLPGPRALQGR*EAGMIMLKVQDKAR
Trigger: CCTGGCCTTATCTTGCACTTTCAACATAATCATCCCTGCTTCTCATCTGCCCTGCAGTGCTCTTGGACCTGGAAGATCTCCCTGTGGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334696.11
3UTR CCA 90 bp GATCACAAGGGAAACCGATTAGCAGCAGAATTTGTTCATGTTTGGTaGCAGACTGGTGGCCAACTGGAGGGAGGGGAGTTTTACTGTGGG +
Preference number: 1 (lower is better)
Translates to: DHKGNRLAAEFVHVW*QTGGQLEGGEFYCG
Trigger: CCCACAGTAAAACTCCCCTCCCTCCAGTTGGCCACCAGTCTGCCACCAAACATGAACAAATTCTGCTGCTAATCGGTTTCCCTTGTGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334696.11
3UTR CCA 90 bp AAACTTTTCTCCTCTCTGTTGCAGGCCACAGAAAACAACGTAGCCTaGCAGAGATTTCTTCCCTCTGGGCCTATTGCTCTGCTCCCGGTA +
Preference number: 1 (lower is better)
Translates to: KLFSSLLQATENNVA*QRFLPSGPIALLPV
Trigger: TACCGGGAGCAGAGCAATAGGCCCAGAGGGAAGAAATCTCTGCCAGGCTACGTTGTTTTCTGTGGCCTGCAACAGAGAGGAGAAAAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557325.5
3UTR CCA 90 bp TCTAGTTCAAATATCAGGAGGGCCTGGCTGAGTTTAACTCATGGCTaGCACCTGTTCAGTCATGTCCAGCTTTGGCTCTGTTGGCTGAGG +
Preference number: 1 (lower is better)
Translates to: SSSNIRRAWLSLTHG*HLFSHVQLWLCWLR
Trigger: CCTCAGCCAACAGAGCCAAAGCTGGACATGACTGAACAGGTGCCAGCCATGAGTTAAACTCAGCCAGGCCCTCCTGATATTTGAACTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557325.5
3UTR CCA 90 bp CACAACTCCGGAGTACGGCAGGCTGTTGGAATCCAGAATGTGAGCTaGAACTATGACCAGTCTGCTGTTGTGGCTACTCTGCATTTATCA +
Preference number: 1 (lower is better)
Translates to: HNSGVRQAVGIQNVS*NYDQSAVVATLHLS
Trigger: TGATAAATGCAGAGTAGCCACAACAGCAGACTGGTCATAGTTCCAGCTCACATTCTGGATTCCAACAGCCTGCCGTACTCCGGAGTTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557325.5
3UTR CCA 90 bp TTGGTTATGAGGACCAGTACCTATTCAGGCCAGCTCAAGTGGAGATaGTCTCATCGTAAATCCTGTACAGGGAGCAATCTCATGGGCCGT +
Preference number: 1 (lower is better)
Translates to: LVMRTSTYSGQLKWR*SHRKSCTGSNLMGR
Trigger: ACGGCCCATGAGATTGCTCCCTGTACAGGATTTACGATGAGACCATCTCCACTTGAGCTGGCCTGAATAGGTACTGGTCCTCATAACCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557325.5
3UTR CCA 90 bp GGTGTTCTTTTGACACAGCTCTCAGACACCTTGAGTTCCTTGGTTTaGTCCACGTCCCATGAACATGCAGCAGAGCTAGTTAGCATGGAT +
Preference number: 1 (lower is better)
Translates to: GVLLTQLSDTLSSLV*STSHEHAAELVSMD
Trigger: ATCCATGCTAACTAGCTCTGCTGCATGTTCATGGGACGTGGACCAAACCAAGGAACTCAAGGTGTCTGAGAGCTGTGTCAAAAGAACACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557325.5
3UTR CCA 90 bp AGTGGAGATGGTCTCATCGTAAATCCTGTACAGGGAGCAATCTCATaGGCCGTCTTAGGTTGTGAAATAACAGATAGCTGGGCCTCACAG +
Preference number: 1 (lower is better)
Translates to: SGDGLIVNPVQGAIS*AVLGCEITDSWASQ
Trigger: CTGTGAGGCCCAGCTATCTGTTATTTCACAACCTAAGACGGCCCATGAGATTGCTCCCTGTACAGGATTTACGATGAGACCATCTCCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557325.5
3UTR GCA 90 bp TGCTGTTGTGGCTACTCTGCATTTATCAGAGGTAAGATCCTGAGCTaGCATCTGGGGACTTTATTCATAGGCACTAGGTACTTCACAGAG +
Preference number: 1 (lower is better)
Translates to: CCCGYSAFIRGKILS*HLGTLFIGTRYFTE
Trigger: CTCTGTGAAGTACCTAGTGCCTATGAATAAAGTCCCCAGATGGCAGCTCAGGATCTTACCTCTGATAAATGCAGAGTAGCCACAACAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557325.5
3UTR CCA 90 bp GAGAGAGAGGATGGAAACGGAGTCTACTGTGAAAGCCACAAGTTTTaGGGAAATACACTCCTGCAAAGAAGCTGGAGGTTAACAACCAAG +
Preference number: 1 (lower is better)
Translates to: EREDGNGVYCESHKF*GNTLLQRSWRLTTK
Trigger: CTTGGTTGTTAACCTCCAGCTTCTTTGCAGGAGTGTATTTCCCCAAAACTTGTGGCTTTCACAGTAGACTCCGTTTCCATCCTCTCTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334696.11
3UTR CCA 90 bp ATGCTTGAGAGTTTCCAAGTGCAGCAGAGTCTTAGCCGTTGGTATTaGTGTTCTTTTGACACAGCTCTCAGACACCTTGAGTTCCTTGGT +
Preference number: 1 (lower is better)
Translates to: MLESFQVQQSLSRWY*CSFDTALRHLEFLG
Trigger: ACCAAGGAACTCAAGGTGTCTGAGAGCTGTGTCAAAAGAACACCAATACCAACGGCTAAGACTCTGCTGCACTTGGAAACTCTCAAGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557325.5
3UTR TCA 90 bp TGCTGGTTTCTACTGAAGGAAACATGGATGACATTTAGTGTTCTGTaGCTGGTCTGGCACCCTACTTTTGTTGACAAAGATGGGAAGGGG +
Preference number: 1 (lower is better)
Translates to: CWFLLKETWMTFSVL*LVWHPTFVDKDGKG
Trigger: CCCCTTCCCATCTTTGTCAACAAAAGTAGGGTGCCAGACCAGTCACAGAACACTAAATGTCATCCATGTTTCCTTCAGTAGAAACCAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334696.11
3UTR CCA 90 bp AAAGAGAGCATGAGGGACATTAAATATGGTTCTCCCTGGAAATGTTaGTCCACTGTACTGATGTGGGCTGAGAGAGCCAACCAAATCCAA +
Preference number: 1 (lower is better)
Translates to: KESMRDIKYGSPWKC*STVLMWAERANQIQ
Trigger: TTGGATTTGGTTGGCTCTCTCAGCCCACATCAGTACAGTGGACCAACATTTCCAGGGAGAACCATATTTAATGTCCCTCATGCTCTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334696.11
3UTR CCA 90 bp TGGATTCAAAAAGAGAGCATGAGGGACATTAAATATGGTTCTCCCTaGAAATGTTGGTCCACTGTACTGATGTGGGCTGAGAGAGCCAAC +
Preference number: 1 (lower is better)
Translates to: WIQKESMRDIKYGSP*KCWSTVLMWAERAN
Trigger: GTTGGCTCTCTCAGCCCACATCAGTACAGTGGACCAACATTTCCAGGGAGAACCATATTTAATGTCCCTCATGCTCTCTTTTTGAATCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334696.11
3UTR CCA 90 bp GAATTTTTAATTCCCTGCTACTCACATTTCACCTTGTTTGTCTTGTaGCTGATGCTGCTCAGTGGAGTGATGCTGACCACACGGACTTCA +
Preference number: 1 (lower is better)
Translates to: EFLIPCYSHFTLFVL*LMLLSGVMLTTRTS
Trigger: TGAAGTCCGTGTGGTCAGCATCACTCCACTGAGCAGCATCAGCCACAAGACAAACAAGGTGAAATGTGAGTAGCAGGGAATTAAAAATTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555829.5
3UTR CCA 90 bp AAACTTTTGGTTATGAGGACCAGTACCTATTCAGGCCAGCTCAAGTaGAGATGGTCTCATCGTAAATCCTGTACAGGGAGCAATCTCATG +
Preference number: 1 (lower is better)
Translates to: KLLVMRTSTYSGQLK*RWSHRKSCTGSNLM
Trigger: CATGAGATTGCTCCCTGTACAGGATTTACGATGAGACCATCTCCACTTGAGCTGGCCTGAATAGGTACTGGTCCTCATAACCAAAAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557325.5
3UTR TCA 90 bp AGGACACAGACTCTCCAGAAGTTATGCAAACAAAATCAGGCAAGATaGAGAATTTTAAGGCACACCTCCATTGGCCCACAGAGAGTGTTC +
Preference number: 1 (lower is better)
Translates to: RTQTLQKLCKQNQAR*RILRHTSIGPQRVF
Trigger: GAACACTCTCTGTGGGCCAATGGAGGTGTGCCTTAAAATTCTTCATCTTGCCTGATTTTGTTTGCATAACTTCTGGAGAGTCTGTGTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334696.11
3UTR CCA 90 bp CTTTTTATGCTTGAGAGTTTCCAAGTGCAGCAGAGTCTTAGCCGTTaGTATTGGTGTTCTTTTGACACAGCTCTCAGACACCTTGAGTTC +
Preference number: 1 (lower is better)
Translates to: LFMLESFQVQQSLSR*YWCSFDTALRHLEF
Trigger: GAACTCAAGGTGTCTGAGAGCTGTGTCAAAAGAACACCAATACCAACGGCTAAGACTCTGCTGCACTTGGAAACTCTCAAGCATAAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557325.5
3UTR CCA 90 bp CTCAAGTATAGATATGGTTCCATCCTGCATCAAGGCACTCTGAAATaGAATTCACTGCTCACCATGCCTTCAACTGCCATGTTTATACAT +
Preference number: 1 (lower is better)
Translates to: LKYRYGSILHQGTLK*NSLLTMPSTAMFIH
Trigger: ATGTATAAACATGGCAGTTGAAGGCATGGTGAGCAGTGAATTCCATTTCAGAGTGCCTTGATGCAGGATGGAACCATATCTATACTTGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556242.5
3UTR TCA 90 bp AATTTCTCAAGTATAGATATGGTTCCATCCTGCATCAAGGCACTCTaGAATGGAATTCACTGCTCACCATGCCTTCAACTGCCATGTTTA +
Preference number: 1 (lower is better)
Translates to: NFSSIDMVPSCIKAL*NGIHCSPCLQLPCL
Trigger: TAAACATGGCAGTTGAAGGCATGGTGAGCAGTGAATTCCATTTCAGAGTGCCTTGATGCAGGATGGAACCATATCTATACTTGAGAAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556242.5
3UTR GCA 90 bp TCAAGGCACTCTGAAATGGAATTCACTGCTCACCATGCCTTCAACTaGCATGTTTATACATCATACCCTACAGAACTTCATGTTTATCTT +
Preference number: 1 (lower is better)
Translates to: SRHSEMEFTAHHAFN*HVYTSYPTELHVYL
Trigger: AAGATAAACATGAAGTTCTGTAGGGTATGATGTATAAACATGGCAGTTGAAGGCATGGTGAGCAGTGAATTCCATTTCAGAGTGCCTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556242.5
3UTR TCA 90 bp GTAGGTTTGCTTACTCTAAAGAACATCTTGCCCAGAAGTCTGATTTaGGATGAAATGAAGAGAAACAGTCTGCTTTTGAACCAAGTAAGG +
Preference number: 1 (lower is better)
Translates to: VGLLTLKNILPRSLI*DEMKRNSLLLNQVR
Trigger: CCTTACTTGGTTCAAAAGCAGACTGTTTCTCTTCATTTCATCTCAAATCAGACTTCTGGGCAAGATGTTCTTTAGAGTAAGCAAACCTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334696.11
3UTR TCA 90 bp CTCATGAGCGTGGGAAATGTAATTAATTTTATCCAGGAGATTAGCTaGGGAGAGAAAGCTGATCTCACACATGATCTCAATCTCATTAGT +
Preference number: 1 (lower is better)
Translates to: LMSVGNVINFIQEIS*GEKADLTHDLNLIS
Trigger: ACTAATGAGATTGAGATCATGTGTGAGATCAGCTTTCTCTCCTCAGCTAATCTCCTGGATAAAATTAATTACATTTCCCACGCTCATGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556242.5
3UTR-3UTR TCA 90 bp AGTGGAGTGATGCTGACCACACGGACTTCATCGACACAGCTGGTGCCATGCTGCGTTGGGACATGCTGCTaGGTACGTCAGGCCTCGGGT +
Preference number: 2 (lower is better)
Translates to: SGVMLTTRTSSTQLVPCCVGTCC*VRQASG
Trigger: ACCCGAGGCCTGACGTACTCAGCAGCATGTCCCAAC...GCAGCATGGCACCAGCTGTGTCGATGAAGTCCGTGTGGTCAGCATCACTCCACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555829.5
3UTR CAA 90 bp GGTTGGGACATGCTGCTGAGTACGTCAGGCCTCGGGTGGCGCTCATaGGGTAAGACGATAACAGAGCAGGGCCACTCCCTTCTCACTTTG +
Preference number: 2 (lower is better)
Translates to: GWDMLLSTSGLGWRS*GKTITEQGHSLLTL
Trigger: CAAAGTGAGAAGGGAGTGGCCCTGCTCTGTTATCGTCTTACCCAATGAGCGCCACCCGAGGCCTGACGTACTCAGCAGCATGTCCCAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555829.5
3UTR CAA 90 bp GTAGCCAGGGTGGATGCCAAAAGCCGAGTTCTGTTTCCTCTTGGGTaGGGACATGCTGCTGAGTACGTCAGGCCTCGGGTGGCGCTCATT +
Preference number: 2 (lower is better)
Translates to: VARVDAKSRVLFPLG*GHAAEYVRPRVALI
Trigger: AATGAGCGCCACCCGAGGCCTGACGTACTCAGCAGCATGTCCCAACCCAAGAGGAAACAGAACTCGGCTTTTGGCATCCACCCTGGCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555829.5
3UTR-3UTR CCA 90 bp AACCAAGGCAAAGGGGCCAGACCACAGGGAGATCTTCCAGGTCCAAGAGCACTGCCAGGGACCTGTCCCTaGGCTCTCACTCCAAGGTTA +
Preference number: 2 (lower is better)
Translates to: NQGKGARPQGDLPGPRALPGTCP*ALTPRL
Trigger: TAACCTTGGAGTGAGAGCCCAGGGACAGGTCCCTGG...CAGTGCTCTTGGACCTGGAAGATCTCCCTGTGGTCTGGCCCCTTTGCCTTGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334696.11
3UTR-3UTR TCA 90 bp GGGCCAGACCACAGGGAGATCTTCCAGGTCCAAGAGCACTGCAGGGCAGATGAGTGTACTGATGTGGGCTaGGAGAGCCAACCAAATCCA +
Preference number: 2 (lower is better)
Translates to: GPDHREIFQVQEHCRADECTDVG*ESQPNP
Trigger: TGGATTTGGTTGGCTCTCTCAGCCCACATCAGTACA...CTCATCTGCCCTGCAGTGCTCTTGGACCTGGAAGATCTCCCTGTGGTCTGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334696.11
3UTR-3UTR TCA 90 bp CGCTATACCTGGCCTTGTCCATTTCCTATGGCCGACTCCAGCCCTTGGGTTCATGGTAAGAGGTCCTTCTaGCCAGTCCGCCCACATGCA +
Preference number: 2 (lower is better)
Translates to: RYTWPCPFPMADSSPWVHGKRSF*PVRPHA
Trigger: TGCATGTGGGCGGACTGGTCAGAAGGACCTCTTACC...ATGAACCCAAGGGCTGGAGTCGGCCATAGGAAATGGACAAGGCCAGGTATAGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557325.5
3UTR-3UTR GCA 90 bp GCTGCTCAGTGGAGTGATGCTGACCACACGGACTTCATCGACACAGCTGGTGCCCAGAGTCCATCCGCTTaGAGGACAGGGTGTCAACAT +
Preference number: 2 (lower is better)
Translates to: AAQWSDADHTDFIDTAGAQSPSA*RTGCQH
Trigger: ATGTTGACACCCTGTCCTGCAAGCGGATGGACTCTG...GGCACCAGCTGTGTCGATGAAGTCCGTGTGGTCAGCATCACTCCACTGAGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555829.5
3UTR-3UTR GCA 90 bp CTCCCCAGACCGAGTGACGGTTCTCTACAGGAGCAAAGCCATTCGCTATACCTGTCCCTCTGGGCCTATTaGTCTGCTCCCGGTAAGAGG +
Preference number: 2 (lower is better)
Translates to: LPRPSDGSLQEQSHSLYLSLWAY*SAPGKR
Trigger: CCTCTTACCGGGAGCAGAGCAATAGGCCCAGAGGGA...CAGGTATAGCGAATGGCTTTGCTCCTGTAGAGAACCGTCACTCGGTCTGGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557325.5
3UTR-3UTR CCA 90 bp AGGGTGGATGCCAAAAGCCGAGTTCTGTTTCCTCTTGGGTTGGGACATGCTGCTACGTCAGGCCTCGGGTaGCGCTCATTGGGTAAGACG +
Preference number: 2 (lower is better)
Translates to: RVDAKSRVLFPLGLGHAATSGLG*RSLGKT
Trigger: CGTCTTACCCAATGAGCGCCACCCGAGGCCTGACGT...AGCAGCATGTCCCAACCCAAGAGGAAACAGAACTCGGCTTTTGGCATCCACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555829.5
3UTR-3UTR TCA 90 bp AACCAAGGCAAAGGGGCCAGACCACAGGGAGATCTTCCAGGTCCAAGAGCACTGCCAGCTGTGTACTCTTaGGTGGTTAGGCAGCAGTTC +
Preference number: 2 (lower is better)
Translates to: NQGKGARPQGDLPGPRALPAVYS*VVRQQF
Trigger: GAACTGCTGCCTAACCACTCAAGAGTACACAGCTGG...CAGTGCTCTTGGACCTGGAAGATCTCCCTGTGGTCTGGCCCCTTTGCCTTGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334696.11
3UTR-3UTR GCA 90 bp GCTGGTGCCATGCTGCAGTATGCTGTCAGCCTTCTGAAGCCCACTAAGGTCTCGCCCTTCTCACTTTGCTaGCAGAGGTCACACCTGAAC +
Preference number: 2 (lower is better)
Translates to: AGAMLQYAVSLLKPTKVSPFSLC*QRSHLN
Trigger: GTTCAGGTGTGACCTCTGGCAGCAAAGTGAGAAGGG...CGAGACCTTAGTGGGCTTCAGAAGGCTGACAGCATACTGCAGCATGGCACCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555829.5
3UTR-3UTR GCA 90 bp GCTGGTGCCATGCTGCAGTATGCTGTCAGCCTTCTGAAGCCCACTAAGGTCTCGCGTAGCCAGGGTGGATaGCAAAAGCCGAGTTCTGTT +
Preference number: 2 (lower is better)
Translates to: AGAMLQYAVSLLKPTKVSRSQGG*QKPSSV
Trigger: AACAGAACTCGGCTTTTGGCATCCACCCTGGCTACG...CGAGACCTTAGTGGGCTTCAGAAGGCTGACAGCATACTGCAGCATGGCACCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555829.5
3UTR-3UTR TCA 90 bp ATGGCCGACTCCAGCCCTTGGGTTCATATTACCCTAGGTGATGGCAGCACCTTCTCTAGGGGCTGTGAGTaGAGCAGGCCTGATGGAATT +
Preference number: 2 (lower is better)
Translates to: MADSSPWVHITLGDGSTFSRGCE*SRPDGI
Trigger: AATTCCATCAGGCCTGCTTCACTCACAGCCCCTAGA...GAAGGTGCTGCCATCACCTAGGGTAATATGAACCCAAGGGCTGGAGTCGGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557325.5
3UTR-3UTR GCA 90 bp CTCCCCAGACCGAGTGACGGTTCTCTACAGGAGCAAAGCCATTCGCTATACCTGACCAGTCCGCCCACATaGATGCAAGCCTTTCCTCTT +
Preference number: 2 (lower is better)
Translates to: LPRPSDGSLQEQSHSLYLTSPPT*MQAFPL
Trigger: AAGAGGAAAGGCTTGCATGCATGTGGGCGGACTGGT...CAGGTATAGCGAATGGCTTTGCTCCTGTAGAGAACCGTCACTCGGTCTGGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557325.5
3UTR-3UTR CCA 90 bp AACCAAGGCAAAGGGGCCAGACCACAGGGAGATCTTCCAGGTCCAAGAGCACTGAGGATGGCTCTCAGCTaGCTGATTGGAGCTAACACA +
Preference number: 2 (lower is better)
Translates to: NQGKGARPQGDLPGPRALRMALS*LIGANT
Trigger: TGTGTTAGCTCCAATCAGCCAGCTGAGAGCCATCCT...CAGTGCTCTTGGACCTGGAAGATCTCCCTGTGGTCTGGCCCCTTTGCCTTGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334696.11
3UTR-3UTR CCA 90 bp AGCAGGGCCACTCCCTTCTCACTTTGCTGCCAGAGGTCACACCTGAACTCTGCTTGTCAACATGGGCTTTaGGGATATCTCCAGCTTGGC +
Preference number: 2 (lower is better)
Translates to: SRATPFSLCCQRSHLNSACQHGL*GYLQLG
Trigger: GCCAAGCTGGAGATATCCCCAAAGCCCATGTTGACA...AGCAGAGTTCAGGTGTGACCTCTGGCAGCAAAGTGAGAAGGGAGTGGCCCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555829.5
3UTR-3UTR GCA 90 bp TGTCTTGTGGCTGATGCTGCTCAGTGGAGTGATGCTGACCACACGGACTTCATCACTCCCTTCTCACTTTaGTGCCAGAGGTCACACCTG +
Preference number: 2 (lower is better)
Translates to: CLVADAAQWSDADHTDFITPFSL*CQRSHL
Trigger: CAGGTGTGACCTCTGGCAGCAAAGTGAGAAGGGAGT...GATGAAGTCCGTGTGGTCAGCATCACTCCACTGAGCAGCATCAGCCACAAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555829.5
3UTR-3UTR GCA 90 bp ATTCGCTATACCTGGCCTTGTCCATTTCCTATGGCCGACTCCAGCCCTTGGGTTGTCCGCCCACATGCATaGAAGCCTTTCCTCTTCACT +
Preference number: 2 (lower is better)
Translates to: IRYTWPCPFPMADSSPWVVRPHA*KPFLFT
Trigger: AGTGAAGAGGAAAGGCTTGCATGCATGTGGGCGGAC...AACCCAAGGGCTGGAGTCGGCCATAGGAAATGGACAAGGCCAGGTATAGCGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557325.5
3UTR-3UTR CCA 90 bp ATTCGCTATACCTGGCCTTGTCCATTTCCTATGGCCGACTCCAGCCCTTGGGTTAGTCATGTCCAGCTTTaGCTCTGTTGGCTGAGGCTG +
Preference number: 2 (lower is better)
Translates to: IRYTWPCPFPMADSSPWVSHVQL*LCWLRL
Trigger: CAGCCTCAGCCAACAGAGCCAAAGCTGGACATGACT...AACCCAAGGGCTGGAGTCGGCCATAGGAAATGGACAAGGCCAGGTATAGCGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557325.5
3UTR CAA 90 bp AACTCTGCTTTATTCTTAGGGATGCAGCCCACAGAGTCCATCCGCTaGCAGGACAGGGTGTCAACATGGGCTTTGGGGATATCTCCAGCT +
Preference number: 2 (lower is better)
Translates to: NSALFLGMQPTESIR*QDRVSTWALGISPA
Trigger: AGCTGGAGATATCCCCAAAGCCCATGTTGACACCCTGTCCTGCAAGCGGATGGACTCTGTGGGCTGCATCCCTAAGAATAAAGCAGAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555829.5
3UTR-3UTR CCA 90 bp AACCAAGGCAAAGGGGCCAGACCACAGGGAGATCTTCCAGGTCCAAGAGCACTGCCCTTAAAAAGGTGTTaGCAAATGCAGGTCTCCAAG +
Preference number: 2 (lower is better)
Translates to: NQGKGARPQGDLPGPRALPLKRC*QMQVSK
Trigger: CTTGGAGACCTGCATTTGCCAACACCTTTTTAAGGG...CAGTGCTCTTGGACCTGGAAGATCTCCCTGTGGTCTGGCCCCTTTGCCTTGGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334696.11
3UTR-3UTR CCA 90 bp GGGCCAGACCACAGGGAGATCTTCCAGGTCCAAGAGCACTGCAGGGCAGATGAGATACAGATTCTGACATaGTCCCATTTTGCGTTGTTG +
Preference number: 2 (lower is better)
Translates to: GPDHREIFQVQEHCRADEIQILT*SHFALL
Trigger: CAACAACGCAAAATGGGACCATGTCAGAATCTGTAT...CTCATCTGCCCTGCAGTGCTCTTGGACCTGGAAGATCTCCCTGTGGTCTGGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334696.11
3UTR CAA 90 bp AGTGACGGTTCTCTACAGGAGCAAAGCCATTCGCTATACCTGGCCTaGTCCATTTCCTATGGCCGACTCCAGCCCTTGGGTTCATATTAC +
Preference number: 2 (lower is better)
Translates to: SDGSLQEQSHSLYLA*SISYGRLQPLGSYY
Trigger: GTAATATGAACCCAAGGGCTGGAGTCGGCCATAGGAAATGGACAAGGCCAGGTATAGCGAATGGCTTTGCTCCTGTAGAGAACCGTCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557325.5
3UTR-3UTR TCA 90 bp CTCCCCAGACCGAGTGACGGTTCTCTACAGGAGCAAAGCCATTCGCTATACCTGGTATTGGTGTTCTTTTaGCACAGCTCTCAGACACCT +
Preference number: 2 (lower is better)
Translates to: LPRPSDGSLQEQSHSLYLVLVFF*HSSQTP
Trigger: AGGTGTCTGAGAGCTGTGTCAAAAGAACACCAATAC...CAGGTATAGCGAATGGCTTTGCTCCTGTAGAGAACCGTCACTCGGTCTGGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557325.5
3UTR-3UTR TCA 90 bp TCTAGTTCAAATATCAGGAGGGCCTGGCTGAGTTTAACTCATGGCTGGCACCTGTGTGAGCTGGAACTATaGCCAGTCTGCTGTTGTGGC +
Preference number: 2 (lower is better)
Translates to: SSSNIRRAWLSLTHGWHLCELEL*PVCCCG
Trigger: GCCACAACAGCAGACTGGTCATAGTTCCAGCTCACA...CAGGTGCCAGCCATGAGTTAAACTCAGCCAGGCCCTCCTGATATTTGAACTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557325.5
3UTR-3UTR CCA 90 bp CAGATAGGTGCAGATGGTCACAACTCCGGAGTACGGCAGGCTGTTGGAATCCAGTTGAGTTCCTTGGTTTaGTCCACGTCCCATGAACAT +
Preference number: 2 (lower is better)
Translates to: QIGADGHNSGVRQAVGIQLSSLV*STSHEH
Trigger: ATGTTCATGGGACGTGGACCAAACCAAGGAACTCAA...CTGGATTCCAACAGCCTGCCGTACTCCGGAGTTGTGACCATCTGCACCTATCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557325.5
3UTR-3UTR CCA 90 bp CGCTATACCTGGCCTTGTCCATTTCCTATGGCCGACTCCAGCCCTTGGGTTCATACCAGTCTGCTGTTGTaGCTACTCTGCATTTATCAG +
Preference number: 2 (lower is better)
Translates to: RYTWPCPFPMADSSPWVHTSLLL*LLCIYQ
Trigger: CTGATAAATGCAGAGTAGCCACAACAGCAGACTGGT...ATGAACCCAAGGGCTGGAGTCGGCCATAGGAAATGGACAAGGCCAGGTATAGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557325.5
3UTR-3UTR CCA 90 bp CAGGGAGCAATCTCATGGGCCGTCTTAGGTTGTGAAATAACAGATAGCTGGGCCCAGGCACCAGAGTGTTaGGAATGGAGGCTGTTCTTT +
Preference number: 2 (lower is better)
Translates to: QGAISWAVLGCEITDSWAQAPEC*EWRLFF
Trigger: AAAGAACAGCCTCCATTCCCAACACTCTGGTGCCTG...GGCCCAGCTATCTGTTATTTCACAACCTAAGACGGCCCATGAGATTGCTCCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557325.5
3UTR-3UTR CCA 90 bp ATTCGCTATACCTGGCCTTGTCCATTTCCTATGGCCGACTCCAGCCCTTGGGTTTCAGGCCAGCTCAAGTaGAGATGGTCTCATCGTAAA +
Preference number: 2 (lower is better)
Translates to: IRYTWPCPFPMADSSPWVSGQLK*RWSHRK
Trigger: TTTACGATGAGACCATCTCCACTTGAGCTGGCCTGA...AACCCAAGGGCTGGAGTCGGCCATAGGAAATGGACAAGGCCAGGTATAGCGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557325.5
3UTR-3UTR TCA 90 bp AGAGGTAAGATCCTGAGCTGCCATCTGGGGACTTTATTCATAGGCACTAGGTACTTGGTCCACGTCCCATaGACATGCAGCAGAGCTAGT +
Preference number: 2 (lower is better)
Translates to: RGKILSCHLGTLFIGTRYLVHVP*TCSRAS
Trigger: ACTAGCTCTGCTGCATGTTCATGGGACGTGGACCAA...GTACCTAGTGCCTATGAATAAAGTCCCCAGATGGCAGCTCAGGATCTTACCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557325.5
3UTR-3UTR TCA 90 bp ATTCGCTATACCTGGCCTTGTCCATTTCCTATGGCCGACTCCAGCCCTTGGGTTGTGTGTGCCCCATACTaGAACTTTCCTTATTGCTCT +
Preference number: 2 (lower is better)
Translates to: IRYTWPCPFPMADSSPWVVCAPY*NFPYCS
Trigger: AGAGCAATAAGGAAAGTTTCAGTATGGGGCACACAC...AACCCAAGGGCTGGAGTCGGCCATAGGAAATGGACAAGGCCAGGTATAGCGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557325.5
3UTR-3UTR GCA 90 bp GGCCACAGAAAACAACGTAGCCTGGCAGAGATTTCTTCCCTCTGGGCCTATTGCTTGAGAGTTTCCAAGTaGAGCAGAGTCTTAGCCGTT +
Preference number: 2 (lower is better)
Translates to: GHRKQRSLAEISSLWAYCLRVSK*SRVLAV
Trigger: AACGGCTAAGACTCTGCTGCACTTGGAAACTCTCAA...GCAATAGGCCCAGAGGGAAGAAATCTCTGCCAGGCTACGTTGTTTTCTGTGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557325.5
3UTR-3UTR CCA 90 bp CATTTCACCTTGTTTGTCTTGTGGCTGATGCTGCTCAGTGGAGTGATGCTGACCTGTTTCCTCTTGGGTTaGGACATGCTGCTGAGTACG +
Preference number: 2 (lower is better)
Translates to: HFTLFVLWLMLLSGVMLTCFLLG*DMLLST
Trigger: CGTACTCAGCAGCATGTCCCAACCCAAGAGGAAACA...GGTCAGCATCACTCCACTGAGCAGCATCAGCCACAAGACAAACAAGGTGAAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555829.5
3UTR-3UTR CCA 90 bp ACATTTCACCTTGTTTGTCTTGTGGCTGATGCTGCTCAGTGGAGTGATGCTGACCTTCATCGACACAGCTaGTGCCATGCTGCAGTATGC +
Preference number: 2 (lower is better)
Translates to: TFHLVCLVADAAQWSDADLHRHS*CHAAVC
Trigger: GCATACTGCAGCATGGCACCAGCTGTGTCGATGAAG...GTCAGCATCACTCCACTGAGCAGCATCAGCCACAAGACAAACAAGGTGAAATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555829.5
3UTR CAA 90 bp TCATTGGGTAAGACGATAACAGAGCAGGGCCACTCCCTTCTCACTTaGCTGCCAGAGGTCACACCTGAACTCTGCTTTATTCTTAGGGAT +
Preference number: 2 (lower is better)
Translates to: SLGKTITEQGHSLLT*LPEVTPELCFILRD
Trigger: ATCCCTAAGAATAAAGCAGAGTTCAGGTGTGACCTCTGGCAGCAAAGTGAGAAGGGAGTGGCCCTGCTCTGTTATCGTCTTACCCAATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555829.5
3UTR CAA 90 bp GGTATTGGTGTTCTTTTGACACAGCTCTCAGACACCTTGAGTTCCTaGGTTTGGTCCACGTCCCATGAACATGCAGCAGAGCTAGTTAGC +
Preference number: 2 (lower is better)
Translates to: GIGVLLTQLSDTLSS*VWSTSHEHAAELVS
Trigger: GCTAACTAGCTCTGCTGCATGTTCATGGGACGTGGACCAAACCAAGGAACTCAAGGTGTCTGAGAGCTGTGTCAAAAGAACACCAATACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557325.5
3UTR CAA 90 bp TTAGCCGTTGGTATTGGTGTTCTTTTGACACAGCTCTCAGACACCTaGAGTTCCTTGGTTTGGTCCACGTCCCATGAACATGCAGCAGAG +
Preference number: 2 (lower is better)
Translates to: LAVGIGVLLTQLSDT*SSLVWSTSHEHAAE
Trigger: CTCTGCTGCATGTTCATGGGACGTGGACCAAACCAAGGAACTCAAGGTGTCTGAGAGCTGTGTCAAAAGAACACCAATACCAACGGCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557325.5
3UTR CAA 90 bp GTTTCCAAGTGCAGCAGAGTCTTAGCCGTTGGTATTGGTGTTCTTTaGACACAGCTCTCAGACACCTTGAGTTCCTTGGTTTGGTCCACG +
Preference number: 2 (lower is better)
Translates to: VSKCSRVLAVGIGVL*TQLSDTLSSLVWST
Trigger: CGTGGACCAAACCAAGGAACTCAAGGTGTCTGAGAGCTGTGTCAAAAGAACACCAATACCAACGGCTAAGACTCTGCTGCACTTGGAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557325.5
3UTR-3UTR TCA 90 bp CTCCCCAGACCGAGTGACGGTTCTCTACAGGAGCAAAGCCATTCGCTATACCTGTTGTCTTTTTATGCTTaGGAGTTTCCAAGTGCAGCA +
Preference number: 2 (lower is better)
Translates to: LPRPSDGSLQEQSHSLYLLSFYA*EFPSAA
Trigger: TGCTGCACTTGGAAACTCTCAAGCATAAAAAGACAA...CAGGTATAGCGAATGGCTTTGCTCCTGTAGAGAACCGTCACTCGGTCTGGGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557325.5
3UTR-3UTR GCA 90 bp AGGGTGGATGCCAAAAGCCGAGTTCTGTTTCCTCTTGGGTTGGGACATGCTGCTGTCACACCTGAACTCTaGTTTATTCTTAGGGATGCA +
Preference number: 2 (lower is better)
Translates to: RVDAKSRVLFPLGLGHAAVTPEL*FILRDA
Trigger: TGCATCCCTAAGAATAAAGCAGAGTTCAGGTGTGAC...AGCAGCATGTCCCAACCCAAGAGGAAACAGAACTCGGCTTTTGGCATCCACCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555829.5
3UTR-3UTR GCA 90 bp TACTCACATTTCACCTTGTTTGTCTTGTGGCTGATGCTGCTCAGTGGAGTGATGCATCGACACAGCTGGTaGCATGCTGCAGTATGCTGT +
Preference number: 2 (lower is better)
Translates to: YSHFTLFVLWLMLLSGVMHRHSW*HAAVCC
Trigger: ACAGCATACTGCAGCATGGCACCAGCTGTGTCGATG...CATCACTCCACTGAGCAGCATCAGCCACAAGACAAACAAGGTGAAATGTGAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555829.5
3UTR-3UTR CCA 90 bp CTCACATTTCACCTTGTTTGTCTTGTGGCTGATGCTGCTCAGTGGAGTGATGCTGACAGGGTGTCAACATaGGCTTTGGGGATATCTCCA +
Preference number: 2 (lower is better)
Translates to: LTFHLVCLVADAAQWSDADRVST*ALGISP
Trigger: TGGAGATATCCCCAAAGCCCATGTTGACACCCTGTC...AGCATCACTCCACTGAGCAGCATCAGCCACAAGACAAACAAGGTGAAATGTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555829.5
3UTR-3UTR CCA 90 bp TTGCTCTCTAGTTCAAATATCAGGAGGGCCTGGCTGAGTTTAACTCATGGCTGGAGTACGGCAGGCTGTTaGAATCCAGAATGTGAGCTG +
Preference number: 2 (lower is better)
Translates to: LLSSSNIRRAWLSLTHGWSTAGC*NPECEL
Trigger: CAGCTCACATTCTGGATTCCAACAGCCTGCCGTACT...CCAGCCATGAGTTAAACTCAGCCAGGCCCTCCTGATATTTGAACTAGAGAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557325.5
3UTR-3UTR CCA 90 bp ACCAGTACCTATTCAGGCCAGCTCAAGTGGAGATGGTCTCATCGTAAATCCTGTCAGGGAGCAATCTCATaGGCCGTCTTAGGTTGTGAA +
Preference number: 2 (lower is better)
Translates to: TSTYSGQLKWRWSHRKSCQGAIS*AVLGCE
Trigger: TTCACAACCTAAGACGGCCCATGAGATTGCTCCCTG...ACAGGATTTACGATGAGACCATCTCCACTTGAGCTGGCCTGAATAGGTACTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557325.5
3UTR-3UTR TCA 90 bp GAAAACCAGGTCTCATTAATGCTAGTTATTACTTTATCACAGCACCAGATTTCCGGGCGGAGGTTGCAGTaGGCTGAGATTGCGCCACTC +
Preference number: 2 (lower is better)
Translates to: ENQVSLMLVITLSQHQISGRRLQ*AEIAPL
Trigger: GAGTGGCGCAATCTCAGCTCACTGCAACCTCCGCCC...GGAAATCTGGTGCTGTGATAAAGTAATAACTAGCATTAATGAGACCTGGTTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334696.11
3UTR-3UTR GCA 90 bp ACCAGTACCTATTCAGGCCAGCTCAAGTGGAGATGGTCTCATCGTAAATCCTGTTTCAGCTCCAGTGTGTaGCCCATACTGAAACTTTCC +
Preference number: 2 (lower is better)
Translates to: TSTYSGQLKWRWSHRKSCFSSSV*PILKLS
Trigger: GGAAAGTTTCAGTATGGGGCACACACTGGAGCTGAA...ACAGGATTTACGATGAGACCATCTCCACTTGAGCTGGCCTGAATAGGTACTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557325.5
3UTR-3UTR CCA 90 bp AAAACTTTTGGTTATGAGGACCAGTACCTATTCAGGCCAGCTCAAGTGGAGATGGCAGATAGGTGCAGATaGTCACAACTCCGGAGTACG +
Preference number: 2 (lower is better)
Translates to: KTFGYEDQYLFRPAQVEMADRCR*SQLRST
Trigger: CGTACTCCGGAGTTGTGACCATCTGCACCTATCTGC...CATCTCCACTTGAGCTGGCCTGAATAGGTACTGGTCCTCATAACCAAAAGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557325.5
3UTR CAA 90 bp ACTTCCCTGAAGTTATCCCAAATGATCCTAGTTGTGAGGAATGTCTaGCAGGAGTACTGGAAAGAAGGACTAGAGCAACCTCTGAGGGTC +
Preference number: 2 (lower is better)
Translates to: TSLKLSQMILVVRNV*QEYWKEGLEQPLRV
Trigger: GACCCTCAGAGGTTGCTCTAGTCCTTCTTTCCAGTACTCCTGCAAGACATTCCTCACAACTAGGATCATTTGGGATAACTTCAGGGAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556242.5
3UTR-3UTR TCA 90 bp GAAAACCAGGTCTCATTAATGCTAGTTATTACTTTATCACAGCACCAGATTTCCTCACAGGGCTCTCTGTaGTGCTCTGGTGCCAGCTGT +
Preference number: 2 (lower is better)
Translates to: ENQVSLMLVITLSQHQISSQGSL*CSGASC
Trigger: ACAGCTGGCACCAGAGCATCACAGAGAGCCCTGTGA...GGAAATCTGGTGCTGTGATAAAGTAATAACTAGCATTAATGAGACCTGGTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334696.11
3UTR-3UTR GCA 90 bp TGTGGGCTGAGAGAGCCAACCAAATCCAAGTGGGGTTTTGTCAGGAACGGTATTAGTTCAGAAACTAAGTaGTCTCTCCTCCCCTTAAAA +
Preference number: 2 (lower is better)
Translates to: CGLREPTKSKWGFVRNGISSETK*SLLPLK
Trigger: TTTTAAGGGGAGGAGAGAGCACTTAGTTTCTGAACT...AATACCGTTCCTGACAAAACCCCACTTGGATTTGGTTGGCTCTCTCAGCCCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000334696.11
3UTR-3UTR GCA 90 bp ATAATAGATCCTGGAATAGCACAGACACTGACCTCTGACCACAGACCAAAAGTTTCTGTGATGCTCTGGTaGCAGCTGTGTACTCTTGAG +
Preference number: 2 (lower is better)
Translates to: IIDPGIAQTLTSDHRPKVSVMLW*QLCTLE
Trigger: CTCAAGAGTACACAGCTGGCACCAGAGCATCACAGA...AACTTTTGGTCTGTGGTCAGAGGTCAGTGTCTGTGCTATTCCAGGATCTATTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334696.11
3UTR-3UTR GCA 90 bp AAAACTTTTGGTTATGAGGACCAGTACCTATTCAGGCCAGCTCAAGTGGAGATGGGTAAGATCCTGAGCTaGCATCTGGGGACTTTATTC +
Preference number: 2 (lower is better)
Translates to: KTFGYEDQYLFRPAQVEMGKILS*HLGTLF
Trigger: GAATAAAGTCCCCAGATGGCAGCTCAGGATCTTACC...CATCTCCACTTGAGCTGGCCTGAATAGGTACTGGTCCTCATAACCAAAAGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000557325.5
3UTR-3UTR CCA 90 bp AAAGAGAGCATGAGGGACATTAAATATGGTTCTCCCTGGAAATGTTGGTCCACTCTCTCTGTGATGCTCTaGTGCCAGCTGTGTACTCTT +
Preference number: 2 (lower is better)
Translates to: KESMRDIKYGSPWKCWSTLSVML*CQLCTL
Trigger: AAGAGTACACAGCTGGCACCAGAGCATCACAGAGAG...AGTGGACCAACATTTCCAGGGAGAACCATATTTAATGTCCCTCATGCTCTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334696.11
3UTR-3UTR CCA 90 bp GTTGGAATCCAGAATGTGAGCTGGAACTATGACCAGTCTGCTGTTGTGGCTACTCTTAGCCGTTGGTATTaGTGTTCTTTTGACACAGCT +
Preference number: 2 (lower is better)
Translates to: VGIQNVSWNYDQSAVVATLSRWY*CSFDTA
Trigger: AGCTGTGTCAAAAGAACACCAATACCAACGGCTAAG...AGTAGCCACAACAGCAGACTGGTCATAGTTCCAGCTCACATTCTGGATTCCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557325.5
3UTR-3UTR CCA 90 bp CTGCTCACAAGCTTCCCTTTTTGCATGGTAGCCATTCCTAACCCTACATCAGAAATCCAGAATGTGAGCTaGAACTATGACCAGTCTGCT +
Preference number: 2 (lower is better)
Translates to: LLTSFPFCMVAIPNPTSEIQNVS*NYDQSA
Trigger: AGCAGACTGGTCATAGTTCCAGCTCACATTCTGGAT...TTCTGATGTAGGGTTAGGAATGGCTACCATGCAAAAAGGGAAGCTTGTGAGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557325.5
3UTR-3UTR CCA 90 bp CCTTTTTGCATGGTAGCCATTCCTAACCCTACATCAGAACTATTCAGCTCCAGTGCTGAGTTTAACTCATaGCTGGCACCTGTTCAGTCA +
Preference number: 2 (lower is better)
Translates to: PFCMVAIPNPTSELFSSSAEFNS*LAPVQS
Trigger: TGACTGAACAGGTGCCAGCCATGAGTTAAACTCAGC...ACTGGAGCTGAATAGTTCTGATGTAGGGTTAGGAATGGCTACCATGCAAAAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557325.5
3UTR CAA 90 bp GAACTATTCAGCTCCAGTGTGTGCCCCATACTGAAACTTTCCTTATaGCTCTCTAGTTCAAATATCAGGAGGGCCTGGCTGAGTTTAACT +
Preference number: 2 (lower is better)
Translates to: ELFSSSVCPILKLSL*LSSSNIRRAWLSLT
Trigger: AGTTAAACTCAGCCAGGCCCTCCTGATATTTGAACTAGAGAGCAATAAGGAAAGTTTCAGTATGGGGCACACACTGGAGCTGAATAGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557325.5
3UTR-3UTR TCA 90 bp GGTTGTAGGTTTGCTTACTCTAAAGAACATCTTGCCCAGAAGTCTGATTTGAGATGGCTCTCAGCTGGCTaGTTGGAGCTAACACAGAAT +
Preference number: 2 (lower is better)
Translates to: GCRFAYSKEHLAQKSDLRWLSAG*LELTQN
Trigger: ATTCTGTGTTAGCTCCAATCAGCCAGCTGAGAGCCA...TCTCAAATCAGACTTCTGGGCAAGATGTTCTTTAGAGTAAGCAAACCTACAACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334696.11
3UTR-3UTR CCA 90 bp AAAACTTTTGGTTATGAGGACCAGTACCTATTCAGGCCAGCTCAAGTGGAGATGGAAAACAACGTAGCCTaGCAGAGATTTCTTCCCTCT +
Preference number: 2 (lower is better)
Translates to: KTFGYEDQYLFRPAQVEMENNVA*QRFLPS
Trigger: AGAGGGAAGAAATCTCTGCCAGGCTACGTTGTTTTC...CATCTCCACTTGAGCTGGCCTGAATAGGTACTGGTCCTCATAACCAAAAGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000557325.5
3UTR-3UTR TCA 90 bp TCACTGCTCACCATGCCTTCAACTGCCATGTTTATACATCATACCCTACAGAACCTCACCTGCTTAGGTTaGTCTACAAAAGCAGAAAGT +
Preference number: 2 (lower is better)
Translates to: SLLTMPSTAMFIHHTLQNLTCLG*STKAES
Trigger: ACTTTCTGCTTTTGTAGATCAACCTAAGCAGGTGAG...GTTCTGTAGGGTATGATGTATAAACATGGCAGTTGAAGGCATGGTGAGCAGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556242.5
3UTR-3UTR GCA 90 bp ATAATAGATCCTGGAATAGCACAGACACTGACCTCTGACCACAGACCAAAAGTTAAAGGTGTTGGCAAATaGAGGTCTCCAAGGAAGTAC +
Preference number: 2 (lower is better)
Translates to: IIDPGIAQTLTSDHRPKVKGVGK*RSPRKY
Trigger: GTACTTCCTTGGAGACCTGCATTTGCCAACACCTTT...AACTTTTGGTCTGTGGTCAGAGGTCAGTGTCTGTGCTATTCCAGGATCTATTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334696.11
3UTR-3UTR CCA 90 bp TTTGGGGTAAATAATTCACAGTCAAGAGCTCTGAGCACTTGGATTCAAAAAGAGTCCACTGTACTGATGTaGGCTGAGAGAGCCAACCAA +
Preference number: 2 (lower is better)
Translates to: FGVNNSQSRALSTWIQKESTVLM*AERANQ
Trigger: TTGGTTGGCTCTCTCAGCCCACATCAGTACAGTGGA...CTCTTTTTGAATCCAAGTGCTCAGAGCTCTTGACTGTGAATTATTTACCCCAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334696.11
3UTR-3UTR CCA 90 bp GGTTGTAGGTTTGCTTACTCTAAAGAACATCTTGCCCAGAAGTCTGATTTGAGAATTGAGATCAGGAGTTaGAAACCAGCCTGGCCAACA +
Preference number: 2 (lower is better)
Translates to: GCRFAYSKEHLAQKSDLRIEIRS*KPAWPT
Trigger: TGTTGGCCAGGCTGGTTTCCAACTCCTGATCTCAAT...TCTCAAATCAGACTTCTGGGCAAGATGTTCTTTAGAGTAAGCAAACCTACAACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334696.11
3UTR-3UTR TCA 90 bp AAAGAGAGCATGAGGGACATTAAATATGGTTCTCCCTGGAAATGTTGGTCCACTAGGCACTCAAAGGGTTaGAATGCGATTTTTCTTTGG +
Preference number: 2 (lower is better)
Translates to: KESMRDIKYGSPWKCWSTRHSKG*NAIFLW
Trigger: CCAAAGAAAAATCGCATTTCAACCCTTTGAGTGCCT...AGTGGACCAACATTTCCAGGGAGAACCATATTTAATGTCCCTCATGCTCTCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334696.11
3UTR-3UTR TCA 90 bp GGTTGTAGGTTTGCTTACTCTAAAGAACATCTTGCCCAGAAGTCTGATTTGAGAGGATCATACAGATTCTaGCATGGTCCCATTTTGCGT +
Preference number: 2 (lower is better)
Translates to: GCRFAYSKEHLAQKSDLRGSYRF*HGPILR
Trigger: ACGCAAAATGGGACCATGTCAGAATCTGTATGATCC...TCTCAAATCAGACTTCTGGGCAAGATGTTCTTTAGAGTAAGCAAACCTACAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334696.11
3UTR-3UTR CCA 90 bp TTTGGGGTAAATAATTCACAGTCAAGAGCTCTGAGCACTTGGATTCAAAAAGAGTCTCCCTGGAAATGTTaGTCCACTGTACTGATGTGG +
Preference number: 2 (lower is better)
Translates to: FGVNNSQSRALSTWIQKESPWKC*STVLMW
Trigger: CCACATCAGTACAGTGGACCAACATTTCCAGGGAGA...CTCTTTTTGAATCCAAGTGCTCAGAGCTCTTGACTGTGAATTATTTACCCCAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334696.11
3UTR CAA 90 bp CTGTGGGTTTTTGAAGAGGTCTCGTCACAAGACCAGAGATGCCTCTaGAAGAGATTTTTAGGTTGTAGGTTTGCTTACTCTAAAGAACAT +
Preference number: 2 (lower is better)
Translates to: LWVFEEVSSQDQRCL*KRFLGCRFAYSKEH
Trigger: ATGTTCTTTAGAGTAAGCAAACCTACAACCTAAAAATCTCTTCAAGAGGCATCTCTGGTCTTGTGACGAGACCTCTTCAAAAACCCACAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000334696.11
3UTR CAA 90 bp TGGGTTCATATTACCCTAGGTGATGGCAGCACCTTCCAGACCAAATaGTTGGTAGTTGAAGATTCTTATTTTGCTAGGGGTCTTGTATAT +
Preference number: 2 (lower is better)
Translates to: WVHITLGDGSTFQTK*LVVEDSYFARGLVY
Trigger: ATATACAAGACCCCTAGCAAAATAAGAATCTTCAACTACCAACAATTTGGTCTGGAAGGTGCTGCCATCACCTAGGGTAATATGAACCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557325.5
3UTR CAA 90 bp GTTCATATTACCCTAGGTGATGGCAGCACCTTCCAGACCAAATTGTaGGTAGTTGAAGATTCTTATTTTGCTAGGGGTCTTGTATATCTA +
Preference number: 2 (lower is better)
Translates to: VHITLGDGSTFQTKL*VVEDSYFARGLVYL
Trigger: TAGATATACAAGACCCCTAGCAAAATAAGAATCTTCAACTACCAACAATTTGGTCTGGAAGGTGCTGCCATCACCTAGGGTAATATGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557325.5
3UTR-3UTR TCA 90 bp GGTTGTAGGTTTGCTTACTCTAAAGAACATCTTGCCCAGAAGTCTGATTTGAGAAAATATTCAGTGGAATaGGGCACTCAAAGGGTTGAA +
Preference number: 2 (lower is better)
Translates to: GCRFAYSKEHLAQKSDLRKYSVE*GTQRVE
Trigger: TTCAACCCTTTGAGTGCCTCATTCCACTGAATATTT...TCTCAAATCAGACTTCTGGGCAAGATGTTCTTTAGAGTAAGCAAACCTACAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334696.11
3UTR-3UTR TCA 90 bp GAAAACCAGGTCTCATTAATGCTAGTTATTACTTTATCACAGCACCAGATTTCCCACAGTCAAGAGCTCTaGGCACTTGGATTCAAAAAG +
Preference number: 2 (lower is better)
Translates to: ENQVSLMLVITLSQHQISHSQEL*ALGFKK
Trigger: CTTTTTGAATCCAAGTGCTCAGAGCTCTTGACTGTG...GGAAATCTGGTGCTGTGATAAAGTAATAACTAGCATTAATGAGACCTGGTTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334696.11
3UTR-3UTR GCA 90 bp ACTCAATGGAGTAATGTTAAAAATAAGGTTTCCCATGGACTGTGTGAGGGCCAGGACATGGTCCCATTTTaGGTTGTTGAATTATACATG +
Preference number: 2 (lower is better)
Translates to: TQWSNVKNKVSHGLCEGQDMVPF*VVELYM
Trigger: CATGTATAATTCAACAACGCAAAATGGGACCATGTC...CTGGCCCTCACACAGTCCATGGGAAACCTTATTTTTAACATTACTCCATTGAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334696.11
3UTR-3UTR CCA 90 bp GAAAACAAGTTTAGAATCATAGAAAACACTGTTAACACATTAGCCTGGGAGGTGCTGTGTACTCTTGAGTaGTTAGGCAGCAGTTCACAT +
Preference number: 2 (lower is better)
Translates to: ENKFRIIENTVNTLAWEVLCTLE*LGSSSH
Trigger: ATGTGAACTGCTGCCTAACCACTCAAGAGTACACAG...CACCTCCCAGGCTAATGTGTTAACAGTGTTTTCTATGATTCTAAACTTGTTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334696.11
3UTR-3UTR CCA 90 bp GAAAACCAGGTCTCATTAATGCTAGTTATTACTTTATCACAGCACCAGATTTCCAATGCGATTTTTCTTTaGTTTCCAGGGACCTGTCCC +
Preference number: 2 (lower is better)
Translates to: ENQVSLMLVITLSQHQISNAIFL*FPGTCP
Trigger: GGGACAGGTCCCTGGAAACCAAAGAAAAATCGCATT...GGAAATCTGGTGCTGTGATAAAGTAATAACTAGCATTAATGAGACCTGGTTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334696.11
3UTR-3UTR CCA 90 bp GGTTGTAGGTTTGCTTACTCTAAAGAACATCTTGCCCAGAAGTCTGATTTGAGACTAAGATGGACAAATTaGTTACTTCTCCAGAAGGTC +
Preference number: 2 (lower is better)
Translates to: GCRFAYSKEHLAQKSDLRLRWTN*LLLQKV
Trigger: GACCTTCTGGAGAAGTAACCAATTTGTCCATCTTAG...TCTCAAATCAGACTTCTGGGCAAGATGTTCTTTAGAGTAAGCAAACCTACAACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334696.11
3UTR-3UTR TCA 90 bp GGTTGTAGGTTTGCTTACTCTAAAGAACATCTTGCCCAGAAGTCTGATTTGAGACCCATTTTGCGTTGTTaGATTATACATGGAAAGCAA +
Preference number: 2 (lower is better)
Translates to: GCRFAYSKEHLAQKSDLRPILRC*IIHGKQ
Trigger: TTGCTTTCCATGTATAATTCAACAACGCAAAATGGG...TCTCAAATCAGACTTCTGGGCAAGATGTTCTTTAGAGTAAGCAAACCTACAACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334696.11
3UTR-3UTR GCA 90 bp GGTTGTAGGTTTGCTTACTCTAAAGAACATCTTGCCCAGAAGTCTGATTTGAGAAAGGATACAGAAATTTaGCTAGTAACTTGCACACAG +
Preference number: 2 (lower is better)
Translates to: GCRFAYSKEHLAQKSDLRKDTEI*LVTCTQ
Trigger: CTGTGTGCAAGTTACTAGGCAAATTTCTGTATCCTT...TCTCAAATCAGACTTCTGGGCAAGATGTTCTTTAGAGTAAGCAAACCTACAACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334696.11
3UTR-3UTR CCA 90 bp GAGAGAAAGCTGATCTCACACATGATCTCAATCTCATTAGTGAATAGCATGAAAAACAGAAGAGAGAGCTaGTTACCAAAAGTTAGGCTG +
Preference number: 2 (lower is better)
Translates to: ERKLISHMISISLVNSMKNRRES*LPKVRL
Trigger: CAGCCTAACTTTTGGTAACCAGCTCTCTCTTCTGTT...TTTCATGCTATTCACTAATGAGATTGAGATCATGTGTGAGATCAGCTTTCTCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556242.5
3UTR CAA 90 bp CTCTATTCATCTTCTACCACCAAAGATTTTTGTCATCATGGGTTGTaGCCTAATTTCTCAAGTATAGATATGGTTCCATCCTGCATCAAG +
Preference number: 2 (lower is better)
Translates to: LYSSSTTKDFCHHGL*PNFSSIDMVPSCIK
Trigger: CTTGATGCAGGATGGAACCATATCTATACTTGAGAAATTAGGCAACAACCCATGATGACAAAAATCTTTGGTGGTAGAAGATGAATAGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556242.5
3UTR CAA 90 bp ACTCTCTATTCATCTTCTACCACCAAAGATTTTTGTCATCATGGGTaGTTGCCTAATTTCTCAAGTATAGATATGGTTCCATCCTGCATC +
Preference number: 2 (lower is better)
Translates to: TLYSSSTTKDFCHHG*LPNFSSIDMVPSCI
Trigger: GATGCAGGATGGAACCATATCTATACTTGAGAAATTAGGCAACAACCCATGATGACAAAAATCTTTGGTGGTAGAAGATGAATAGAGAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556242.5
3UTR-3UTR GCA 90 bp GAAAACAAGTTTAGAATCATAGAAAACACTGTTAACACATTAGCCTGGGAGGTGGATGGGTCTTGGGATTaGAATAAGTCAGTTTACCAT +
Preference number: 2 (lower is better)
Translates to: ENKFRIIENTVNTLAWEVDGSWD*NKSVYH
Trigger: ATGGTAAACTGACTTATTGCAATCCCAAGACCCATC...CACCTCCCAGGCTAATGTGTTAACAGTGTTTTCTATGATTCTAAACTTGTTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334696.11
3UTR-3UTR GCA 90 bp CATCTTCTACCACCAAAGATTTTTGTCATCATGGGTTGTTGCCTAATTTCTCAACACCATGCCTTCAACTaGCATGTTTATACATCATAC +
Preference number: 2 (lower is better)
Translates to: HLLPPKIFVIMGCCLISQHHAFN*HVYTSY
Trigger: GTATGATGTATAAACATGGCAGTTGAAGGCATGGTG...TTGAGAAATTAGGCAACAACCCATGATGACAAAAATCTTTGGTGGTAGAAGATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556242.5
3UTR-3UTR CCA 90 bp CATCTTCTACCACCAAAGATTTTTGTCATCATGGGTTGTTGCCTAATTTCTCAATTAACAGCAGTGGTGTaGTCAAGTTATCAAGGCATT +
Preference number: 2 (lower is better)
Translates to: HLLPPKIFVIMGCCLISQLTAVV*SSYQGI
Trigger: AATGCCTTGATAACTTGACCACACCACTGCTGTTAA...TTGAGAAATTAGGCAACAACCCATGATGACAAAAATCTTTGGTGGTAGAAGATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556242.5
3UTR-3UTR CCA 90 bp TTTGGGGTAAATAATTCACAGTCAAGAGCTCTGAGCACTTGGATTCAAAAAGAGAATTTAAATATTCAGTaGAATGAGGCACTCAAAGGG +
Preference number: 2 (lower is better)
Translates to: FGVNNSQSRALSTWIQKENLNIQ*NEALKG
Trigger: CCCTTTGAGTGCCTCATTCCACTGAATATTTAAATT...CTCTTTTTGAATCCAAGTGCTCAGAGCTCTTGACTGTGAATTATTTACCCCAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334696.11
3UTR-3UTR CCA 90 bp GAAAACCAGGTCTCATTAATGCTAGTTATTACTTTATCACAGCACCAGATTTCCGATATTGATGGGTCTTaGGATTGCAATAAGTCAGTT +
Preference number: 2 (lower is better)
Translates to: ENQVSLMLVITLSQHQISDIDGS*DCNKSV
Trigger: AACTGACTTATTGCAATCCCAAGACCCATCAATATC...GGAAATCTGGTGCTGTGATAAAGTAATAACTAGCATTAATGAGACCTGGTTTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334696.11
3UTR TCA 72 bp CAGCTGGTGCCATGCTGCAGTATGCTGTCAGCCTTCTaGAGCCCACTAAGGTCTCGGCTCGCCAGCTGCCCC +
Preference number: 3 (lower is better)
Translates to: QLVPCCSMLSAF*SPLRSRLASCP
Trigger: GGGGCAGCTGGCGAGCCGAGACCTTAGTGGGCTTCAGAAGGCTGACAGCATACTGCAGCATGGCACCAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555829.5
3UTR GCA 72 bp GGCTCGCCAGCTGCCCCCAAGCGTAGCCAGGGTGGATaGCAAAAGCCGAGTTCTGTTTCCTCTTGGGTTGGG +
Preference number: 3 (lower is better)
Translates to: GSPAAPKRSQGG*QKPSSVSSWVG
Trigger: CCCAACCCAAGAGGAAACAGAACTCGGCTTTTGGCATCCACCCTGGCTACGCTTGGGGGCAGCTGGCGAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555829.5
3UTR CCA 72 bp GGTTGGGACATGCTGCTGAGTACGTCAGGCCTCGGGTaGCGCTCATTGGGTAAGACGATAACAGAGCAGGGC +
Preference number: 3 (lower is better)
Translates to: GWDMLLSTSGLG*RSLGKTITEQG
Trigger: GCCCTGCTCTGTTATCGTCTTACCCAATGAGCGCCACCCGAGGCCTGACGTACTCAGCAGCATGTCCCAACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555829.5
3UTR TCA 72 bp CCGAGTTCTGTTTCCTCTTGGGTTGGGACATGCTGCTaGGTACGTCAGGCCTCGGGTGGCGCTCATTGGGTA +
Preference number: 3 (lower is better)
Translates to: PSSVSSWVGTCC*VRQASGGAHWV
Trigger: TACCCAATGAGCGCCACCCGAGGCCTGACGTACTCAGCAGCATGTCCCAACCCAAGAGGAAACAGAACTCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555829.5
3UTR TCA 72 bp TGGGCCTATTGCTCTGCTCCCGGTAAGAGGTCCTTCTaGCCAGTCCGCCCACATGCATGCAAGCCTTTCCTC +
Preference number: 3 (lower is better)
Translates to: WAYCSAPGKRSF*PVRPHACKPFL
Trigger: GAGGAAAGGCTTGCATGCATGTGGGCGGACTGGTCAGAAGGACCTCTTACCGGGAGCAGAGCAATAGGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557325.5
3UTR CCA 72 bp TGGATGCCAAAAGCCGAGTTCTGTTTCCTCTTGGGTTaGGACATGCTGCTGAGTACGTCAGGCCTCGGGTGG +
Preference number: 3 (lower is better)
Translates to: WMPKAEFCFLLG*DMLLSTSGLGW
Trigger: CCACCCGAGGCCTGACGTACTCAGCAGCATGTCCCAACCCAAGAGGAAACAGAACTCGGCTTTTGGCATCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555829.5
3UTR-3UTR CAA 90 bp AGTGGAGTGATGCTGACCACACGGACTTCATCGACACAGCTGGTGCCATGCTGCGTGTCAACATGGGCTTaGGGGATATCTCCAGCTTGG +
Preference number: 3 (lower is better)
Translates to: SGVMLTTRTSSTQLVPCCVSTWA*GISPAW
Trigger: CCAAGCTGGAGATATCCCCAAAGCCCATGTTGACAC...GCAGCATGGCACCAGCTGTGTCGATGAAGTCCGTGTGGTCAGCATCACTCCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555829.5
3UTR-3UTR CAA 90 bp CTCCCCAGACCGAGTGACGGTTCTCTACAGGAGCAAAGCCATTCGCTATACCTGCCAGCTTTGGCTCTGTaGGCTGAGGCTGATGTGACA +
Preference number: 3 (lower is better)
Translates to: LPRPSDGSLQEQSHSLYLPALAL*AEADVT
Trigger: TGTCACATCAGCCTCAGCCAACAGAGCCAAAGCTGG...CAGGTATAGCGAATGGCTTTGCTCCTGTAGAGAACCGTCACTCGGTCTGGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557325.5
3UTR-3UTR CAA 90 bp ACAGCTGGTGCCATGCTGCAGTATGCTGTCAGCCTTCTGAAGCCCACTAAGGTCGAGTTCTGTTTCCTCTaGGGTTGGGACATGCTGCTG +
Preference number: 3 (lower is better)
Translates to: TAGAMLQYAVSLLKPTKVEFCFL*GWDMLL
Trigger: CAGCAGCATGTCCCAACCCAAGAGGAAACAGAACTC...GACCTTAGTGGGCTTCAGAAGGCTGACAGCATACTGCAGCATGGCACCAGCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555829.5
3UTR GCA 72 bp GAAGACTTAGCAGGCTCATGTGTCCATGCAGATAGGTaGAGATGGTCACAACTCCGGAGTACGGCAGGCTGT +
Preference number: 3 (lower is better)
Translates to: EDLAGSCVHADR*RWSQLRSTAGC
Trigger: ACAGCCTGCCGTACTCCGGAGTTGTGACCATCTGCACCTATCTGCATGGACACATGAGCCTGCTAAGTCTTC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557325.5
3UTR CCA 72 bp TGGCCTTGTCCATTTCCTATGGCCGACTCCAGCCCTTaGGTTCATATTACCCTAGGTGATGGCAGCACCTTC +
Preference number: 3 (lower is better)
Translates to: WPCPFPMADSSP*VHITLGDGSTF
Trigger: GAAGGTGCTGCCATCACCTAGGGTAATATGAACCCAAGGGCTGGAGTCGGCCATAGGAAATGGACAAGGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557325.5
3UTR CCA 72 bp ACGGTTCTCTACAGGAGCAAAGCCATTCGCTATACCTaGCCTTGTCCATTTCCTATGGCCGACTCCAGCCCT +
Preference number: 3 (lower is better)
Translates to: TVLYRSKAIRYT*PCPFPMADSSP
Trigger: AGGGCTGGAGTCGGCCATAGGAAATGGACAAGGCCAGGTATAGCGAATGGCTTTGCTCCTGTAGAGAACCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557325.5
3UTR CCA 72 bp AGAAAACAACGTAGCCTGGCAGAGATTTCTTCCCTCTaGGCCTATTGCTCTGCTCCCGGTAAGAGGTCCTTC +
Preference number: 3 (lower is better)
Translates to: RKQRSLAEISSL*AYCSAPGKRSF
Trigger: GAAGGACCTCTTACCGGGAGCAGAGCAATAGGCCCAGAGGGAAGAAATCTCTGCCAGGCTACGTTGTTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557325.5
3UTR CCA 72 bp TCCTCTCTGTTGCAGGCCACAGAAAACAACGTAGCCTaGCAGAGATTTCTTCCCTCTGGGCCTATTGCTCTG +
Preference number: 3 (lower is better)
Translates to: SSLLQATENNVA*QRFLPSGPIAL
Trigger: CAGAGCAATAGGCCCAGAGGGAAGAAATCTCTGCCAGGCTACGTTGTTTTCTGTGGCCTGCAACAGAGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557325.5
3UTR CCA 72 bp GGAGTACGGCAGGCTGTTGGAATCCAGAATGTGAGCTaGAACTATGACCAGTCTGCTGTTGTGGCTACTCTG +
Preference number: 3 (lower is better)
Translates to: GVRQAVGIQNVS*NYDQSAVVATL
Trigger: CAGAGTAGCCACAACAGCAGACTGGTCATAGTTCCAGCTCACATTCTGGATTCCAACAGCCTGCCGTACTCC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557325.5
3UTR CCA 72 bp TTAGCAGGCTCATGTGTCCATGCAGATAGGTGCAGATaGTCACAACTCCGGAGTACGGCAGGCTGTTGGAAT +
Preference number: 3 (lower is better)
Translates to: LAGSCVHADRCR*SQLRSTAGCWN
Trigger: ATTCCAACAGCCTGCCGTACTCCGGAGTTGTGACCATCTGCACCTATCTGCATGGACACATGAGCCTGCTAA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557325.5
3UTR-3UTR CAA 90 bp AACCAAGGCAAAGGGGCCAGACCACAGGGAGATCTTCCAGGTCCAAGAGCACTGGCAGGGATGATTATGTaGAAAGTGCAAGATAAGGCC +
Preference number: 3 (lower is better)
Translates to: NQGKGARPQGDLPGPRALAGMIM*KVQDKA
Trigger: GGCCTTATCTTGCACTTTCAACATAATCATCCCTGC...CAGTGCTCTTGGACCTGGAAGATCTCCCTGTGGTCTGGCCCCTTTGCCTTGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334696.11
3UTR-3UTR CAA 90 bp GGGCCAGACCACAGGGAGATCTTCCAGGTCCAAGAGCACTGCAGGGCAGATGAGTGGTCCCATTTTGCGTaGTTGAATTATACATGGAAA +
Preference number: 3 (lower is better)
Translates to: GPDHREIFQVQEHCRADEWSHFA*LNYTWK
Trigger: TTTCCATGTATAATTCAACAACGCAAAATGGGACCA...CTCATCTGCCCTGCAGTGCTCTTGGACCTGGAAGATCTCCCTGTGGTCTGGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334696.11
3UTR CCA 72 bp GGTTCTCCCTGGAAATGTTGGTCCACTGTACTGATGTaGGCTGAGAGAGCCAACCAAATCCAAGTGGGGTTT +
Preference number: 3 (lower is better)
Translates to: GSPWKCWSTVLM*AERANQIQVGF
Trigger: AAACCCCACTTGGATTTGGTTGGCTCTCTCAGCCCACATCAGTACAGTGGACCAACATTTCCAGGGAGAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334696.11
3UTR CCA 72 bp AAAGATGGCAGCTGCTGTGAAAAGCTGTGTGACTCCTaGCGGAGACTGCAGGGACAAGGTCATCTTTCACAA +
Preference number: 3 (lower is better)
Translates to: KDGSCCEKLCDS*RRLQGQGHLSQ
Trigger: TTGTGAAAGATGACCTTGTCCCTGCAGTCTCCGCCAGGAGTCACACAGCTTTTCACAGCAGCTGCCATCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334696.11
3UTR CCA 72 bp AGCAGCAGAATTTGTTCATGTTTGGTGGCAGACTGGTaGCCAACTGGAGGGAGGGGAGTTTTACTGTGGGTT +
Preference number: 3 (lower is better)
Translates to: SSRICSCLVADW*PTGGRGVLLWV
Trigger: AACCCACAGTAAAACTCCCCTCCCTCCAGTTGGCCACCAGTCTGCCACCAAACATGAACAAATTCTGCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334696.11
3UTR CCA 72 bp GGAAACCGATTAGCAGCAGAATTTGTTCATGTTTGGTaGCAGACTGGTGGCCAACTGGAGGGAGGGGAGTTT +
Preference number: 3 (lower is better)
Translates to: GNRLAAEFVHVW*QTGGQLEGGEF
Trigger: AAACTCCCCTCCCTCCAGTTGGCCACCAGTCTGCCACCAAACATGAACAAATTCTGCTGCTAATCGGTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334696.11
3UTR CCA 72 bp AATATCAGGAGGGCCTGGCTGAGTTTAACTCATGGCTaGCACCTGTTCAGTCATGTCCAGCTTTGGCTCTGT +
Preference number: 3 (lower is better)
Translates to: NIRRAWLSLTHG*HLFSHVQLWLC
Trigger: ACAGAGCCAAAGCTGGACATGACTGAACAGGTGCCAGCCATGAGTTAAACTCAGCCAGGCCCTCCTGATATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557325.5
3UTR TCA 72 bp TCCCTGGAAATGTTGGTCCACTGTACTGATGTGGGCTaGGAGAGCCAACCAAATCCAAGTGGGGTTTTGTCA +
Preference number: 3 (lower is better)
Translates to: SLEMLVHCTDVG*ESQPNPSGVLS
Trigger: TGACAAAACCCCACTTGGATTTGGTTGGCTCTCTCAGCCCACATCAGTACAGTGGACCAACATTTCCAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334696.11
3UTR GCA 72 bp CTTCTCACTTTGCTGCCAGAGGTCACACCTGAACTCTaGTTTATTCTTAGGGATGCAGCCCACAGAGTCCAT +
Preference number: 3 (lower is better)
Translates to: LLTLLPEVTPEL*FILRDAAHRVH
Trigger: ATGGACTCTGTGGGCTGCATCCCTAAGAATAAAGCAGAGTTCAGGTGTGACCTCTGGCAGCAAAGTGAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555829.5
3UTR CCA 72 bp TTTCACCTTGTTTGTCTTGTGGCTGATGCTGCTCAGTaGAGTGATGCTGACCACACGGACTTCATCGACACA +
Preference number: 3 (lower is better)
Translates to: FHLVCLVADAAQ*SDADHTDFIDT
Trigger: TGTGTCGATGAAGTCCGTGTGGTCAGCATCACTCCACTGAGCAGCATCAGCCACAAGACAAACAAGGTGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555829.5
3UTR CCA 72 bp TTGACACAGCTCTCAGACACCTTGAGTTCCTTGGTTTaGTCCACGTCCCATGAACATGCAGCAGAGCTAGTT +
Preference number: 3 (lower is better)
Translates to: LTQLSDTLSSLV*STSHEHAAELV
Trigger: AACTAGCTCTGCTGCATGTTCATGGGACGTGGACCAAACCAAGGAACTCAAGGTGTCTGAGAGCTGTGTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557325.5
3UTR-3UTR CAA 90 bp ACTTCTGAAGCAGTTTATGAAGAGGCTGGAAGACTTAGCAGGCTCATGTGTCCAGACACCTTGAGTTCCTaGGTTTGGTCCACGTCCCAT +
Preference number: 3 (lower is better)
Translates to: TSEAVYEEAGRLSRLMCPDTLSS*VWSTSH
Trigger: ATGGGACGTGGACCAAACCAAGGAACTCAAGGTGTC...TGGACACATGAGCCTGCTAAGTCTTCCAGCCTCTTCATAAACTGCTTCAGAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557325.5
3UTR-3UTR CAA 90 bp ACTTCTGAAGCAGTTTATGAAGAGGCTGGAAGACTTAGCAGGCTCATGTGTCCACAGCTCTCAGACACCTaGAGTTCCTTGGTTTGGTCC +
Preference number: 3 (lower is better)
Translates to: TSEAVYEEAGRLSRLMCPQLSDT*SSLVWS
Trigger: GGACCAAACCAAGGAACTCAAGGTGTCTGAGAGCTG...TGGACACATGAGCCTGCTAAGTCTTCCAGCCTCTTCATAAACTGCTTCAGAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557325.5
3UTR TCA 72 bp TCCAAAACTATACTTTTTGGCTCACAGGGCTCTCTGTaGTGCTCTGGTGCCAGCTGTGTACTCTTGAGTGGT +
Preference number: 3 (lower is better)
Translates to: SKTILFGSQGSL*CSGASCVLLSG
Trigger: ACCACTCAAGAGTACACAGCTGGCACCAGAGCATCACAGAGAGCCCTGTGAGCCAAAAAGTATAGTTTTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334696.11
3UTR TCA 72 bp AATATGGTTCTCCCTGGAAATGTTGGTCCACTGTACTaGTGTGGGCTGAGAGAGCCAACCAAATCCAAGTGG +
Preference number: 3 (lower is better)
Translates to: NMVLPGNVGPLY*CGLREPTKSKW
Trigger: CCACTTGGATTTGGTTGGCTCTCTCAGCCCACATCAGTACAGTGGACCAACATTTCCAGGGAGAACCATATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334696.11
3UTR CCA 72 bp ATTCCCTGCTACTCACATTTCACCTTGTTTGTCTTGTaGCTGATGCTGCTCAGTGGAGTGATGCTGACCACA +
Preference number: 3 (lower is better)
Translates to: IPCYSHFTLFVL*LMLLSGVMLTT
Trigger: TGTGGTCAGCATCACTCCACTGAGCAGCATCAGCCACAAGACAAACAAGGTGAAATGTGAGTAGCAGGGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555829.5
3UTR-3UTR CAA 90 bp TGTGGGCTGAGAGAGCCAACCAAATCCAAGTGGGGTTTTGTCAGGAACGGTATTCCAAAACTATACTTTTaGGCTCACAGGGCTCTCTGT +
Preference number: 3 (lower is better)
Translates to: CGLREPTKSKWGFVRNGIPKLYF*AHRALC
Trigger: ACAGAGAGCCCTGTGAGCCAAAAAGTATAGTTTTGG...AATACCGTTCCTGACAAAACCCCACTTGGATTTGGTTGGCTCTCTCAGCCCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000334696.11
3UTR-3UTR CAA 90 bp GTTGGAATCCAGAATGTGAGCTGGAACTATGACCAGTCTGCTGTTGTGGCTACTGGTATTGGTGTTCTTTaGACACAGCTCTCAGACACC +
Preference number: 3 (lower is better)
Translates to: VGIQNVSWNYDQSAVVATGIGVL*TQLSDT
Trigger: GGTGTCTGAGAGCTGTGTCAAAAGAACACCAATACC...AGTAGCCACAACAGCAGACTGGTCATAGTTCCAGCTCACATTCTGGATTCCAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557325.5
3UTR-3UTR CAA 90 bp ATTCGCTATACCTGGCCTTGTCCATTTCCTATGGCCGACTCCAGCCCTTGGGTTTTTGTCTTTTTATGCTaGAGAGTTTCCAAGTGCAGC +
Preference number: 3 (lower is better)
Translates to: IRYTWPCPFPMADSSPWVFVFLC*RVSKCS
Trigger: GCTGCACTTGGAAACTCTCAAGCATAAAAAGACAAA...AACCCAAGGGCTGGAGTCGGCCATAGGAAATGGACAAGGCCAGGTATAGCGAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000557325.5
3UTR GCA 72 bp TGGAGTTCAGAGGTATTTGGGATGACCAAAGGAGTCTaGTGGACAGTATGTGTGTTTTACAAAATGGCCCCC +
Preference number: 3 (lower is better)
Translates to: WSSEVFGMTKGV*WTVCVFYKMAP
Trigger: GGGGGCCATTTTGTAAAACACACATACTGTCCAGCAGACTCCTTTGGTCATCCCAAATACCTCTGAACTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334696.11
3UTR GCA 72 bp GGCTACTCTGCATTTATCAGAGGTAAGATCCTGAGCTaGCATCTGGGGACTTTATTCATAGGCACTAGGTAC +
Preference number: 3 (lower is better)
Translates to: GYSAFIRGKILS*HLGTLFIGTRY
Trigger: GTACCTAGTGCCTATGAATAAAGTCCCCAGATGGCAGCTCAGGATCTTACCTCTGATAAATGCAGAGTAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557325.5
3UTR CCA 72 bp ATGAGGGACATTAAATATGGTTCTCCCTGGAAATGTTaGTCCACTGTACTGATGTGGGCTGAGAGAGCCAAC +
Preference number: 3 (lower is better)
Translates to: MRDIKYGSPWKC*STVLMWAERAN
Trigger: GTTGGCTCTCTCAGCCCACATCAGTACAGTGGACCAACATTTCCAGGGAGAACCATATTTAATGTCCCTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334696.11
3UTR CCA 72 bp AGTTTCCAAGTGCAGCAGAGTCTTAGCCGTTGGTATTaGTGTTCTTTTGACACAGCTCTCAGACACCTTGAG +
Preference number: 3 (lower is better)
Translates to: SFQVQQSLSRWY*CSFDTALRHLE
Trigger: CTCAAGGTGTCTGAGAGCTGTGTCAAAAGAACACCAATACCAACGGCTAAGACTCTGCTGCACTTGGAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557325.5
3UTR CCA 72 bp CTTGAGAGTTTCCAAGTGCAGCAGAGTCTTAGCCGTTaGTATTGGTGTTCTTTTGACACAGCTCTCAGACAC +
Preference number: 3 (lower is better)
Translates to: LESFQVQQSLSR*YWCSFDTALRH
Trigger: GTGTCTGAGAGCTGTGTCAAAAGAACACCAATACCAACGGCTAAGACTCTGCTGCACTTGGAAACTCTCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557325.5
3UTR CCA 72 bp TCCTTATTGCTCTCTAGTTCAAATATCAGGAGGGCCTaGCTGAGTTTAACTCATGGCTGGCACCTGTTCAGT +
Preference number: 3 (lower is better)
Translates to: SLLLSSSNIRRA*LSLTHGWHLFS
Trigger: ACTGAACAGGTGCCAGCCATGAGTTAAACTCAGCCAGGCCCTCCTGATATTTGAACTAGAGAGCAATAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557325.5
3UTR CCA 72 bp GGTCTCATCGTAAATCCTGTACAGGGAGCAATCTCATaGGCCGTCTTAGGTTGTGAAATAACAGATAGCTGG +
Preference number: 3 (lower is better)
Translates to: GLIVNPVQGAIS*AVLGCEITDSW
Trigger: CCAGCTATCTGTTATTTCACAACCTAAGACGGCCCATGAGATTGCTCCCTGTACAGGATTTACGATGAGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557325.5
3UTR-3UTR CAA 90 bp ATTTTTAATTCCCTGCTACTCACATTTCACCTTGTTTGTCTTGTGGCTGATGCTACAGAGTCCATCCGCTaGCAGGACAGGGTGTCAACA +
Preference number: 3 (lower is better)
Translates to: IFNSLLLTFHLVCLVADATESIR*QDRVST
Trigger: TGTTGACACCCTGTCCTGCAAGCGGATGGACTCTGT...AGCATCAGCCACAAGACAAACAAGGTGAAATGTGAGTAGCAGGGAATTAAAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555829.5
3UTR-3UTR CAA 90 bp CCTTTTTGCATGGTAGCCATTCCTAACCCTACATCAGAACTATTCAGCTCCAGTCTTTTCTCCTCTCTGTaGCAGGCCACAGAAAACAAC +
Preference number: 3 (lower is better)
Translates to: PFCMVAIPNPTSELFSSSLFSSL*QATENN
Trigger: GTTGTTTTCTGTGGCCTGCAACAGAGAGGAGAAAAG...ACTGGAGCTGAATAGTTCTGATGTAGGGTTAGGAATGGCTACCATGCAAAAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000557325.5
3UTR CCA 72 bp AAAGAGAGCATGAGGGACATTAAATATGGTTCTCCCTaGAAATGTTGGTCCACTGTACTGATGTGGGCTGAG +
Preference number: 3 (lower is better)
Translates to: KESMRDIKYGSP*KCWSTVLMWAE
Trigger: CTCAGCCCACATCAGTACAGTGGACCAACATTTCCAGGGAGAACCATATTTAATGTCCCTCATGCTCTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334696.11
3UTR CCA 72 bp GATGGAAACGGAGTCTACTGTGAAAGCCACAAGTTTTaGGGAAATACACTCCTGCAAAGAAGCTGGAGGTTA +
Preference number: 3 (lower is better)
Translates to: DGNGVYCESHKF*GNTLLQRSWRL
Trigger: TAACCTCCAGCTTCTTTGCAGGAGTGTATTTCCCCAAAACTTGTGGCTTTCACAGTAGACTCCGTTTCCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334696.11
3UTR-3UTR CAA 90 bp ACTCAATGGAGTAATGTTAAAAATAAGGTTTCCCATGGACTGTGTGAGGGCCAGCCCCTTAAAAAGGTGTaGGCAAATGCAGGTCTCCAA +
Preference number: 3 (lower is better)
Translates to: TQWSNVKNKVSHGLCEGQPLKKV*ANAGLQ
Trigger: TTGGAGACCTGCATTTGCCAACACCTTTTTAAGGGG...CTGGCCCTCACACAGTCCATGGGAAACCTTATTTTTAACATTACTCCATTGAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000334696.11
3UTR-3UTR CAA 90 bp ACTCAATGGAGTAATGTTAAAAATAAGGTTTCCCATGGACTGTGTGAGGGCCAGTTCTCCCTGGAAATGTaGGTCCACTGTACTGATGTG +
Preference number: 3 (lower is better)
Translates to: TQWSNVKNKVSHGLCEGQFSLEM*VHCTDV
Trigger: CACATCAGTACAGTGGACCAACATTTCCAGGGAGAA...CTGGCCCTCACACAGTCCATGGGAAACCTTATTTTTAACATTACTCCATTGAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334696.11
3UTR-3UTR CAA 90 bp GGTTGTAGGTTTGCTTACTCTAAAGAACATCTTGCCCAGAAGTCTGATTTGAGATGTAATCCCAGCACTTaGGGAAGCGGGTGGATCAAT +
Preference number: 3 (lower is better)
Translates to: GCRFAYSKEHLAQKSDLRCNPST*GSGWIN
Trigger: ATTGATCCACCCGCTTCCCAAAGTGCTGGGATTACA...TCTCAAATCAGACTTCTGGGCAAGATGTTCTTTAGAGTAAGCAAACCTACAACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334696.11
3UTR GCA 72 bp CCTAACCCTACATCAGAACTATTCAGCTCCAGTGTGTaGCCCATACTGAAACTTTCCTTATTGCTCTCTAGT +
Preference number: 3 (lower is better)
Translates to: PNPTSELFSSSV*PILKLSLLLSS
Trigger: ACTAGAGAGCAATAAGGAAAGTTTCAGTATGGGGCACACACTGGAGCTGAATAGTTCTGATGTAGGGTTAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557325.5
3UTR CCA 72 bp AATGCGATTTTTCTTTGGTTTCCAGGGACCTGTCCCTaGGCTCTCACTCCAAGGTTAAGTTCCAAAACTATA +
Preference number: 3 (lower is better)
Translates to: NAIFLWFPGTCP*ALTPRLSSKTI
Trigger: TATAGTTTTGGAACTTAACCTTGGAGTGAGAGCCCAGGGACAGGTCCCTGGAAACCAAAGAAAAATCGCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334696.11
3UTR GCA 72 bp TGGGTTTTTGAAGAGGTCTCGTCACAAGACCAGAGATaGCTCTTGAAGAGATTTTTAGGTTGTAGGTTTGCT +
Preference number: 3 (lower is better)
Translates to: WVFEEVSSQDQR*LLKRFLGCRFA
Trigger: AGCAAACCTACAACCTAAAAATCTCTTCAAGAGGCATCTCTGGTCTTGTGACGAGACCTCTTCAAAAACCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000334696.11
3UTR-3UTR CAA 90 bp TTATCCAGGAGATTAGCTGAGGAGAGAAAGCTGATCTCACACATGATCTCAATCGGAAGCTGTCCTATTTaGTCCATGGAACAAAACAGA +
Preference number: 3 (lower is better)
Translates to: LSRRLAEERKLISHMISIGSCPI*SMEQNR
Trigger: TCTGTTTTGTTCCATGGACAAAATAGGACAGCTTCC...GATTGAGATCATGTGTGAGATCAGCTTTCTCTCCTCAGCTAATCTCCTGGATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556242.5
3UTR TCA 72 bp CTACTGAAGGAAACATGGATGACATTTAGTGTTCTGTaGCTGGTCTGGCACCCTACTTTTGTTGACAAAGAT +
Preference number: 3 (lower is better)
Translates to: LLKETWMTFSVL*LVWHPTFVDKD
Trigger: ATCTTTGTCAACAAAAGTAGGGTGCCAGACCAGTCACAGAACACTAAATGTCATCCATGTTTCCTTCAGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334696.11
3UTR GCA 72 bp TCTGAAATGGAATTCACTGCTCACCATGCCTTCAACTaGCATGTTTATACATCATACCCTACAGAACTTCAT +
Preference number: 3 (lower is better)
Translates to: SEMEFTAHHAFN*HVYTSYPTELH
Trigger: ATGAAGTTCTGTAGGGTATGATGTATAAACATGGCAGTTGAAGGCATGGTGAGCAGTGAATTCCATTTCAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556242.5
3UTR CCA 72 bp TTTAGAATCATAGAAAACACTGTTAACACATTAGCCTaGGAGGTGGTACTGGCACTGAATATACACATACCC +
Preference number: 3 (lower is better)
Translates to: FRIIENTVNTLA*EVVLALNIHIP
Trigger: GGGTATGTGTATATTCAGTGCCAGTACCACCTCCCAGGCTAATGTGTTAACAGTGTTTTCTATGATTCTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334696.11
3UTR TCA 72 bp AATAAGCTGTTTGAACATGGCTTAGCAGAAGCTGAATaGCAACCTGTTAGAAATTCTAGGGAATTCTGCACT +
Preference number: 3 (lower is better)
Translates to: NKLFEHGLAEAE*QPVRNSREFCT
Trigger: AGTGCAGAATTCCCTAGAATTTCTAACAGGTTGTCATTCAGCTTCTGCTAAGCCATGTTCAAACAGCTTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334696.11
3UTR CCA 72 bp GGGGTAAATAATTCACAGTCAAGAGCTCTGAGCACTTaGATTCAAAAAGAGAGCATGAGGGACATTAAATAT +
Preference number: 3 (lower is better)
Translates to: GVNNSQSRALST*IQKESMRDIKY
Trigger: ATATTTAATGTCCCTCATGCTCTCTTTTTGAATCCAAGTGCTCAGAGCTCTTGACTGTGAATTATTTACCCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334696.11
3UTR-3UTR CAA 90 bp GAAAACCAGGTCTCATTAATGCTAGTTATTACTTTATCACAGCACCAGATTTCCCCAAGTAAGGTATTCTaGGGAATAATTTTTAGAGCC +
Preference number: 3 (lower is better)
Translates to: ENQVSLMLVITLSQHQISPSKVF*GIIFRA
Trigger: GGCTCTAAAAATTATTCCCAAGAATACCTTACTTGG...GGAAATCTGGTGCTGTGATAAAGTAATAACTAGCATTAATGAGACCTGGTTTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000334696.11
3UTR TCA 72 bp TTTAACAGCAGTGGTGTGGTCAAGTTATCAAGGCATTaGGAATCTAAACATCAAATCATAAGAAACTCACCT +
Preference number: 3 (lower is better)
Translates to: FNSSGVVKLSRH*ESKHQIIRNSP
Trigger: AGGTGAGTTTCTTATGATTTGATGTTTAGATTCTCAATGCCTTGATAACTTGACCACACCACTGCTGTTAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556242.5
CDS-3UTR TCA 90 bp ATGGCCGACTCCAGCCCTTGGGTTCATATTACCCTAGGTGATGGCAGCACCTTCTGGCTGAGGCTGATGTaGCAGTGCAGGGGCTCCACC +
Preference number: 4 (lower is better)
Translates to: MADSSPWVHITLGDGSTFWLRLM*QCRGST
Trigger: GGTGGAGCCCCTGCACTGTCACATCAGCCTCAGCCA...GAAGGTGCTGCCATCACCTAGGGTAATATGAACCCAAGGGCTGGAGTCGGCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557325.5
CDS-3UTR TCA 90 bp ATTCGCTATACCTGGCCTTGTCCATTTCCTATGGCCGACTCCAGCCCTTGGGTTACTGGGGCAGGAACGTaGTTTGGGTGGAGGCTCCCC +
Preference number: 4 (lower is better)
Translates to: IRYTWPCPFPMADSSPWVTGAGT*FGWRLP
Trigger: GGGGAGCCTCCACCCAAATCACGTTCCTGCCCCAGT...AACCCAAGGGCTGGAGTCGGCCATAGGAAATGGACAAGGCCAGGTATAGCGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557325.5
CDS-3UTR CCA 90 bp CGCTATACCTGGCCTTGTCCATTTCCTATGGCCGACTCCAGCCCTTGGGTTCATGGCAGGAACGTGATTTaGGTGGAGGCTCCCCCTAGG +
Preference number: 4 (lower is better)
Translates to: RYTWPCPFPMADSSPWVHGRNVI*VEAPPR
Trigger: CCTAGGGGGAGCCTCCACCCAAATCACGTTCCTGCC...ATGAACCCAAGGGCTGGAGTCGGCCATAGGAAATGGACAAGGCCAGGTATAGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557325.5
CDS-3UTR CCA 90 bp GGGCCAGACCACAGGGAGATCTTCCAGGTCCAAGAGCACTGCAGGGCAGATGAGTCTCTGGACCTCCTCTaGCTGGTGAAGTTTTCCTCG +
Preference number: 4 (lower is better)
Translates to: GPDHREIFQVQEHCRADESLDLL*LVKFSS
Trigger: CGAGGAAAACTTCACCAGCCAGAGGAGGTCCAGAGA...CTCATCTGCCCTGCAGTGCTCTTGGACCTGGAAGATCTCCCTGTGGTCTGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334696.11
CDS-3UTR CCA 90 bp CCAGGGTGGATGCCAAAAGCCGAGTTCTGTTTCCTCTTGGGTTGGGACATGCTGACGTCAGGCCTCGGGTaGCGCTCATTGGGTAAGACG +
Preference number: 4 (lower is better)
Translates to: PGWMPKAEFCFLLGWDMLTSGLG*RSLGKT
Trigger: CGTCTTACCCAATGAGCGCCACCCGAGGCCTGACGT...CAGCATGTCCCAACCCAAGAGGAAACAGAACTCGGCTTTTGGCATCCACCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555829.5
3UTR CAA 72 bp ATGCTGCTGAGTACGTCAGGCCTCGGGTGGCGCTCATaGGGTAAGACGATAACAGAGCAGGGCCACTCCCTT +
Preference number: 4 (lower is better)
Translates to: MLLSTSGLGWRS*GKTITEQGHSL
Trigger: AAGGGAGTGGCCCTGCTCTGTTATCGTCTTACCCAATGAGCGCCACCCGAGGCCTGACGTACTCAGCAGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555829.5
CDS-3UTR TCA 90 bp ATTCGCTATACCTGGCCTTGTCCATTTCCTATGGCCGACTCCAGCCCTTGGGTTCCTCCCCAGACCGAGTaGCGGTTCTCTACAGGAGCA +
Preference number: 4 (lower is better)
Translates to: IRYTWPCPFPMADSSPWVPPQTE*RFSTGA
Trigger: TGCTCCTGTAGAGAACCGTCACTCGGTCTGGGGAGG...AACCCAAGGGCTGGAGTCGGCCATAGGAAATGGACAAGGCCAGGTATAGCGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557325.5
CDS-3UTR GCA 90 bp AACCAAGGCAAAGGGGCCAGACCACAGGGAGATCTTCCAGGTCCAAGAGCACTGCAGGTCCAAGAGCACTaGAGGGCAGATGAGAAGCAG +
Preference number: 4 (lower is better)
Translates to: NQGKGARPQGDLPGPRALQVQEH*RADEKQ
Trigger: CTGCTTCTCATCTGCCCTGCAGTGCTCTTGGACCTG...CAGTGCTCTTGGACCTGGAAGATCTCCCTGTGGTCTGGCCCCTTTGCCTTGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334696.11
CDS-3UTR GCA 90 bp AGTACGTCAGGCCTCGGGTGGCGCTCATTGGGTAAGACGATAACAGAGCAGGGCCCCTTCTCACTTTGCTaGCAGAGGTCACACCTGAAC +
Preference number: 4 (lower is better)
Translates to: STSGLGWRSLGKTITEQGPFSLC*QRSHLN
Trigger: GTTCAGGTGTGACCTCTGGCAGCAAAGTGAGAAGGG...GCCCTGCTCTGTTATCGTCTTACCCAATGAGCGCCACCCGAGGCCTGACGTACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555829.5
CDS-3UTR CCA 90 bp CCTATTGCTCTGCTCCCGGTAAGAGGTCCTTCTGACCAGTCCGCCCACATGCATGTCTGCTGGTTCCTGTaGGAGACAGCGCTGCAAACA +
Preference number: 4 (lower is better)
Translates to: PIALLPVRGPSDQSAHMHVCWFL*ETALQT
Trigger: TGTTTGCAGCGCTGTCTCCCACAGGAACCAGCAGAC...ATGCATGTGGGCGGACTGGTCAGAAGGACCTCTTACCGGGAGCAGAGCAATAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557325.5
CDS-3UTR CCA 90 bp GGGCCAGACCACAGGGAGATCTTCCAGGTCCAAGAGCACTGCAGGGCAGATGAGAGGATGGCTCTCAGCTaGCTGATTGGAGCTAACACA +
Preference number: 4 (lower is better)
Translates to: GPDHREIFQVQEHCRADERMALS*LIGANT
Trigger: TGTGTTAGCTCCAATCAGCCAGCTGAGAGCCATCCT...CTCATCTGCCCTGCAGTGCTCTTGGACCTGGAAGATCTCCCTGTGGTCTGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334696.11
CDS-3UTR CCA 90 bp CAGAGCAGGGCCACTCCCTTCTCACTTTGCTGCCAGAGGTCACACCTGAACTCTGCTGATGCTGCTCAGTaGAGTGATGCTGACCACACG +
Preference number: 4 (lower is better)
Translates to: QSRATPFSLCCQRSHLNSADAAQ*SDADHT
Trigger: CGTGTGGTCAGCATCACTCCACTGAGCAGCATCAGC...AGAGTTCAGGTGTGACCTCTGGCAGCAAAGTGAGAAGGGAGTGGCCCTGCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555829.5
3UTR CAA 72 bp GTGGATGCCAAAAGCCGAGTTCTGTTTCCTCTTGGGTaGGGACATGCTGCTGAGTACGTCAGGCCTCGGGTG +
Preference number: 4 (lower is better)
Translates to: VDAKSRVLFPLG*GHAAEYVRPRV
Trigger: CACCCGAGGCCTGACGTACTCAGCAGCATGTCCCAACCCAAGAGGAAACAGAACTCGGCTTTTGGCATCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555829.5
3UTR CAA 72 bp CCAGGGTGGATGCCAAAAGCCGAGTTCTGTTTCCTCTaGGGTTGGGACATGCTGCTGAGTACGTCAGGCCTC +
Preference number: 4 (lower is better)
Translates to: PGWMPKAEFCFL*GWDMLLSTSGL
Trigger: GAGGCCTGACGTACTCAGCAGCATGTCCCAACCCAAGAGGAAACAGAACTCGGCTTTTGGCATCCACCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555829.5
CDS-3UTR TCA 90 bp CCTATTGCTCTGCTCCCGGTAAGAGGTCCTTCTGACCAGTCCGCCCACATGCATTTGGTCCACGTCCCATaGACATGCAGCAGAGCTAGT +
Preference number: 4 (lower is better)
Translates to: PIALLPVRGPSDQSAHMHLVHVP*TCSRAS
Trigger: ACTAGCTCTGCTGCATGTTCATGGGACGTGGACCAA...ATGCATGTGGGCGGACTGGTCAGAAGGACCTCTTACCGGGAGCAGAGCAATAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557325.5
CDS-3UTR GCA 90 bp CAGTGGAGTGATGCTGACCACACGGACTTCATCGACACAGCTGGTGCCATGCTGCAGAGTCCATCCGCTTaGAGGACAGGGTGTCAACAT +
Preference number: 4 (lower is better)
Translates to: QWSDADHTDFIDTAGAMLQSPSA*RTGCQH
Trigger: ATGTTGACACCCTGTCCTGCAAGCGGATGGACTCTG...CAGCATGGCACCAGCTGTGTCGATGAAGTCCGTGTGGTCAGCATCACTCCACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555829.5
CDS-3UTR GCA 90 bp ACCACACGGACTTCATCGACACAGCTGGTGCCATGCTGCAGTATGCTGTCAGCCACTCCCTTCTCACTTTaGTGCCAGAGGTCACACCTG +
Preference number: 4 (lower is better)
Translates to: TTRTSSTQLVPCCSMLSATPFSL*CQRSHL
Trigger: CAGGTGTGACCTCTGGCAGCAAAGTGAGAAGGGAGT...GGCTGACAGCATACTGCAGCATGGCACCAGCTGTGTCGATGAAGTCCGTGTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555829.5
CDS-3UTR CCA 90 bp GGGCCAGACCACAGGGAGATCTTCCAGGTCCAAGAGCACTGCAGGGCAGATGAGCTGTGCCCCAAGAAGTaGCCATTCTTTTCCCAAGAT +
Preference number: 4 (lower is better)
Translates to: GPDHREIFQVQEHCRADELCPKK*PFFSQD
Trigger: ATCTTGGGAAAAGAATGGCCACTTCTTGGGGCACAG...CTCATCTGCCCTGCAGTGCTCTTGGACCTGGAAGATCTCCCTGTGGTCTGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334696.11
CDS-3UTR CCA 90 bp AACCAAGGCAAAGGGGCCAGACCACAGGGAGATCTTCCAGGTCCAAGAGCACTGCCCACCTCCCCTTCTTaGTTGCCACCATACTGGTAT +
Preference number: 4 (lower is better)
Translates to: NQGKGARPQGDLPGPRALPTSPS*LPPYWY
Trigger: ATACCAGTATGGTGGCAACCAAGAAGGGGAGGTGGG...CAGTGCTCTTGGACCTGGAAGATCTCCCTGTGGTCTGGCCCCTTTGCCTTGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334696.11
CDS-3UTR CCA 90 bp CAGGGTGGATGCCAAAAGCCGAGTTCTGTTTCCTCTTGGGTTGGGACATGCTGCGGGATATCTCCAGCTTaGCCCATCACCTCAGTACGG +
Preference number: 4 (lower is better)
Translates to: QGGCQKPSSVSSWVGTCCGISPA*PITSVR
Trigger: CCGTACTGAGGTGATGGGCCAAGCTGGAGATATCCC...GCAGCATGTCCCAACCCAAGAGGAAACAGAACTCGGCTTTTGGCATCCACCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555829.5
CDS-3UTR CCA 90 bp GCCCCCAAGCGTAGCCAGGGTGGATGCCAAAAGCCGAGTTCTGTTTCCTCTTGGGACAGGGTGTCAACATaGGCTTTGGGGATATCTCCA +
Preference number: 4 (lower is better)
Translates to: APKRSQGGCQKPSSVSSWDRVST*ALGISP
Trigger: TGGAGATATCCCCAAAGCCCATGTTGACACCCTGTC...CCAAGAGGAAACAGAACTCGGCTTTTGGCATCCACCCTGGCTACGCTTGGGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000555829.5
CDS-3UTR TCA 90 bp CGCTATACCTGGCCTTGTCCATTTCCTATGGCCGACTCCAGCCCTTGGGTTCATAGTTTGAAGCTGCCGTaGGCTGTGATTGCACCACTG +
Preference number: 4 (lower is better)
Translates to: RYTWPCPFPMADSSPWVHSLKLP*AVIAPL
Trigger: CAGTGGTGCAATCACAGCTCACGGCAGCTTCAAACT...ATGAACCCAAGGGCTGGAGTCGGCCATAGGAAATGGACAAGGCCAGGTATAGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557325.5
CDS-3UTR GCA 90 bp ATGGCCGACTCCAGCCCTTGGGTTCATATTACCCTAGGTGATGGCAGCACCTTCTGTGGGAGACAGCGCTaGAAACACAGGATACCACCA +
Preference number: 4 (lower is better)
Translates to: MADSSPWVHITLGDGSTFCGRQR*KHRIPP
Trigger: TGGTGGTATCCTGTGTTTGCAGCGCTGTCTCCCACA...GAAGGTGCTGCCATCACCTAGGGTAATATGAACCCAAGGGCTGGAGTCGGCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557325.5
CDS-3UTR GCA 90 bp CTCCCCAGACCGAGTGACGGTTCTCTACAGGAGCAAAGCCATTCGCTATACCTGCCCTCAAACCAAGTCTaGTGGTTCCTGTGGGAGACA +
Preference number: 4 (lower is better)
Translates to: LPRPSDGSLQEQSHSLYLPSNQV*WFLWET
Trigger: TGTCTCCCACAGGAACCAGCAGACTTGGTTTGAGGG...CAGGTATAGCGAATGGCTTTGCTCCTGTAGAGAACCGTCACTCGGTCTGGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557325.5
CDS-3UTR GCA 90 bp GGCCACAGAAAACAACGTAGCCTGGCAGAGATTTCTTCCCTCTGGGCCTATTGCGCACTCCGGAAAGTGTaGCCATCAGTCCCTTCTGTC +
Preference number: 4 (lower is better)
Translates to: GHRKQRSLAEISSLWAYCALRKV*PSVPSV
Trigger: GACAGAAGGGACTGATGGGCACACTTTCCGGAGTGC...GCAATAGGCCCAGAGGGAAGAAATCTCTGCCAGGCTACGTTGTTTTCTGTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557325.5
CDS-3UTR GCA 90 bp ATGGCCGACTCCAGCCCTTGGGTTCATATTACCCTAGGTGATGGCAGCACCTTCGTCCGCCCACATGCATaGAAGCCTTTCCTCTTCACT +
Preference number: 4 (lower is better)
Translates to: MADSSPWVHITLGDGSTFVRPHA*KPFLFT
Trigger: AGTGAAGAGGAAAGGCTTGCATGCATGTGGGCGGAC...GAAGGTGCTGCCATCACCTAGGGTAATATGAACCCAAGGGCTGGAGTCGGCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557325.5
CDS-3UTR CCA 90 bp TGTGGGCTGAGAGAGCCAACCAAATCCAAGTGGGGTTTTGTCAGGAACGGTATTGGCAGGAACGTGATTTaGGTGGAGGCTCCCCCTAGG +
Preference number: 4 (lower is better)
Translates to: CGLREPTKSKWGFVRNGIGRNVI*VEAPPR
Trigger: CCTAGGGGGAGCCTCCACCCAAATCACGTTCCTGCC...AATACCGTTCCTGACAAAACCCCACTTGGATTTGGTTGGCTCTCTCAGCCCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000334696.11
CDS-3UTR CCA 90 bp ATGGCCGACTCCAGCCCTTGGGTTCATATTACCCTAGGTGATGGCAGCACCTTCGCCGACTCCAGCCCTTaGGTTCATATTACCCTAGGT +
Preference number: 4 (lower is better)
Translates to: MADSSPWVHITLGDGSTFADSSP*VHITLG
Trigger: ACCTAGGGTAATATGAACCCAAGGGCTGGAGTCGGC...GAAGGTGCTGCCATCACCTAGGGTAATATGAACCCAAGGGCTGGAGTCGGCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557325.5
3UTR CAA 72 bp TCTCTACAGGAGCAAAGCCATTCGCTATACCTGGCCTaGTCCATTTCCTATGGCCGACTCCAGCCCTTGGGT +
Preference number: 4 (lower is better)
Translates to: SLQEQSHSLYLA*SISYGRLQPLG
Trigger: ACCCAAGGGCTGGAGTCGGCCATAGGAAATGGACAAGGCCAGGTATAGCGAATGGCTTTGCTCCTGTAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557325.5
CDS-3UTR TCA 90 bp AACCAAGGCAAAGGGGCCAGACCACAGGGAGATCTTCCAGGTCCAAGAGCACTGAGCTCTTCAGGAGGCTaGGAACAAGAATCGCTTGAA +
Preference number: 4 (lower is better)
Translates to: NQGKGARPQGDLPGPRALSSSGG*EQESLE
Trigger: TTCAAGCGATTCTTGTTCTCAGCCTCCTGAAGAGCT...CAGTGCTCTTGGACCTGGAAGATCTCCCTGTGGTCTGGCCCCTTTGCCTTGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334696.11
CDS-3UTR TCA 90 bp CGCTATACCTGGCCTTGTCCATTTCCTATGGCCGACTCCAGCCCTTGGGTTCATTCATATTACCCTAGGTaGTGGCAGCACCTTCCAGAC +
Preference number: 4 (lower is better)
Translates to: RYTWPCPFPMADSSPWVHSYYPR*WQHLPD
Trigger: GTCTGGAAGGTGCTGCCATCACCTAGGGTAATATGA...ATGAACCCAAGGGCTGGAGTCGGCCATAGGAAATGGACAAGGCCAGGTATAGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557325.5
CDS-3UTR TCA 90 bp CACTCCCTTCTCACTTTGCTGCCAGAGGTCACACCTGAACTCTGCTTTATTCTTGTTGGGACATGCTGCTaGGTACGTCAGGCCTCGGGT +
Preference number: 4 (lower is better)
Translates to: HSLLTLLPEVTPELCFILVGTCC*VRQASG
Trigger: ACCCGAGGCCTGACGTACTCAGCAGCATGTCCCAAC...AAGAATAAAGCAGAGTTCAGGTGTGACCTCTGGCAGCAAAGTGAGAAGGGAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555829.5
CDS-3UTR GCA 90 bp AACCAAGGCAAAGGGGCCAGACCACAGGGAGATCTTCCAGGTCCAAGAGCACTGCCTCCCCTTCTTGGTTaGCACCATACTGGTATTTCA +
Preference number: 4 (lower is better)
Translates to: NQGKGARPQGDLPGPRALPPLLG*HHTGIS
Trigger: TGAAATACCAGTATGGTGGCAACCAAGAAGGGGAGG...CAGTGCTCTTGGACCTGGAAGATCTCCCTGTGGTCTGGCCCCTTTGCCTTGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334696.11
CDS-3UTR GCA 90 bp CCTATTGCTCTGCTCCCGGTAAGAGGTCCTTCTGACCAGTCCGCCCACATGCATCCTCCCCTTCTTGGTTaGCACCATACTGGTATTTCA +
Preference number: 4 (lower is better)
Translates to: PIALLPVRGPSDQSAHMHPPLLG*HHTGIS
Trigger: TGAAATACCAGTATGGTGGCAACCAAGAAGGGGAGG...ATGCATGTGGGCGGACTGGTCAGAAGGACCTCTTACCGGGAGCAGAGCAATAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557325.5
CDS-3UTR GCA 90 bp CCTATTGCTCTGCTCCCGGTAAGAGGTCCTTCTGACCAGTCCGCCCACATGCATTTCAGCTCCAGTGTGTaGCCCATACTGAAACTTTCC +
Preference number: 4 (lower is better)
Translates to: PIALLPVRGPSDQSAHMHFSSSV*PILKLS
Trigger: GGAAAGTTTCAGTATGGGGCACACACTGGAGCTGAA...ATGCATGTGGGCGGACTGGTCAGAAGGACCTCTTACCGGGAGCAGAGCAATAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557325.5
CDS-3UTR GCA 90 bp CACCTTGTTTGTCTTGTGGCTGATGCTGCTCAGTGGAGTGATGCTGACCACACGCGTAGCCAGGGTGGATaGCAAAAGCCGAGTTCTGTT +
Preference number: 4 (lower is better)
Translates to: HLVCLVADAAQWSDADHTRSQGG*QKPSSV
Trigger: AACAGAACTCGGCTTTTGGCATCCACCCTGGCTACG...CGTGTGGTCAGCATCACTCCACTGAGCAGCATCAGCCACAAGACAAACAAGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555829.5
CDS-3UTR CCA 90 bp GGCCACAGAAAACAACGTAGCCTGGCAGAGATTTCTTCCCTCTGGGCCTATTGCCCCACCTCCCCTTCTTaGTTGCCACCATACTGGTAT +
Preference number: 4 (lower is better)
Translates to: GHRKQRSLAEISSLWAYCPTSPS*LPPYWY
Trigger: ATACCAGTATGGTGGCAACCAAGAAGGGGAGGTGGG...GCAATAGGCCCAGAGGGAAGAAATCTCTGCCAGGCTACGTTGTTTTCTGTGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000557325.5
CDS-3UTR CCA 90 bp CGCTATACCTGGCCTTGTCCATTTCCTATGGCCGACTCCAGCCCTTGGGTTCATCAGGGAGCAATCTCATaGGCCGTCTTAGGTTGTGAA +
Preference number: 4 (lower is better)
Translates to: RYTWPCPFPMADSSPWVHQGAIS*AVLGCE
Trigger: TTCACAACCTAAGACGGCCCATGAGATTGCTCCCTG...ATGAACCCAAGGGCTGGAGTCGGCCATAGGAAATGGACAAGGCCAGGTATAGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557325.5
CDS-3UTR CCA 90 bp CCTATTGCTCTGCTCCCGGTAAGAGGTCCTTCTGACCAGTCCGCCCACATGCATTCAGGCCAGCTCAAGTaGAGATGGTCTCATCGTAAA +
Preference number: 4 (lower is better)
Translates to: PIALLPVRGPSDQSAHMHSGQLK*RWSHRK
Trigger: TTTACGATGAGACCATCTCCACTTGAGCTGGCCTGA...ATGCATGTGGGCGGACTGGTCAGAAGGACCTCTTACCGGGAGCAGAGCAATAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557325.5
CDS-3UTR CCA 90 bp GGGTGGATGCCAAAAGCCGAGTTCTGTTTCCTCTTGGGTTGGGACATGCTGCTGTGTTTCCTCTTGGGTTaGGACATGCTGCTGAGTACG +
Preference number: 4 (lower is better)
Translates to: GWMPKAEFCFLLGWDMLLCFLLG*DMLLST
Trigger: CGTACTCAGCAGCATGTCCCAACCCAAGAGGAAACA...CAGCAGCATGTCCCAACCCAAGAGGAAACAGAACTCGGCTTTTGGCATCCACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555829.5
CDS-3UTR CCA 90 bp CACCTTGTTTGTCTTGTGGCTGATGCTGCTCAGTGGAGTGATGCTGACCACACGCTTCATCGACACAGCTaGTGCCATGCTGCAGTATGC +
Preference number: 4 (lower is better)
Translates to: HLVCLVADAAQWSDADHTLHRHS*CHAAVC
Trigger: GCATACTGCAGCATGGCACCAGCTGTGTCGATGAAG...CGTGTGGTCAGCATCACTCCACTGAGCAGCATCAGCCACAAGACAAACAAGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555829.5
CDS-3UTR TCA 90 bp CAGATAGGTGCAGATGGTCACAACTCCGGAGTACGGCAGGCTGTTGGAATCCAGTGGTACCAGGAAAGGTaGCTTCCTGAAGATCTCCTT +
Preference number: 4 (lower is better)
Translates to: QIGADGHNSGVRQAVGIQWYQER*LPEDLL
Trigger: AAGGAGATCTTCAGGAAGTCACCTTTCCTGGTACCA...CTGGATTCCAACAGCCTGCCGTACTCCGGAGTTGTGACCATCTGCACCTATCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557325.5
CDS-3UTR TCA 90 bp ATTCGCTATACCTGGCCTTGTCCATTTCCTATGGCCGACTCCAGCCCTTGGGTTGTACTCCAGCCTCGGTaGCAGAGTGAGACCAATTTT +
Preference number: 4 (lower is better)
Translates to: IRYTWPCPFPMADSSPWVVLQPR*QSETNF
Trigger: AAAATTGGTCTCACTCTGTCACCGAGGCTGGAGTAC...AACCCAAGGGCTGGAGTCGGCCATAGGAAATGGACAAGGCCAGGTATAGCGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557325.5
CDS-3UTR TCA 90 bp CCTATTGCTCTGCTCCCGGTAAGAGGTCCTTCTGACCAGTCCGCCCACATGCATGGAGTCTGTGGTCATTaGTCTCTTGCCTCTCATTTT +
Preference number: 4 (lower is better)
Translates to: PIALLPVRGPSDQSAHMHGVCGH*SLASHF
Trigger: AAAATGAGAGGCAAGAGATCAATGACCACAGACTCC...ATGCATGTGGGCGGACTGGTCAGAAGGACCTCTTACCGGGAGCAGAGCAATAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557325.5
CDS-3UTR GCA 90 bp TTTGGGAAGCGGGTGGATCAATTGAGATCAGGAGTTGGAAACCAGCCTGGCCAATGTGGGAGACAGCGCTaGAAACACAGGATACCACCA +
Preference number: 4 (lower is better)
Translates to: FGKRVDQLRSGVGNQPGQCGRQR*KHRIPP
Trigger: TGGTGGTATCCTGTGTTTGCAGCGCTGTCTCCCACA...TTGGCCAGGCTGGTTTCCAACTCCTGATCTCAATTGATCCACCCGCTTCCCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334696.11
CDS-3UTR GCA 90 bp TGTGGGCTGAGAGAGCCAACCAAATCCAAGTGGGGTTTTGTCAGGAACGGTATTGCACTCCGGAAAGTGTaGCCATCAGTCCCTTCTGTC +
Preference number: 4 (lower is better)
Translates to: CGLREPTKSKWGFVRNGIALRKV*PSVPSV
Trigger: GACAGAAGGGACTGATGGGCACACTTTCCGGAGTGC...AATACCGTTCCTGACAAAACCCCACTTGGATTTGGTTGGCTCTCTCAGCCCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334696.11
CDS-3UTR GCA 90 bp AACCAAGGCAAAGGGGCCAGACCACAGGGAGATCTTCCAGGTCCAAGAGCACTGTTCGTGGAGTTAGAATaGATCTTCCCTGGAGTTCAG +
Preference number: 4 (lower is better)
Translates to: NQGKGARPQGDLPGPRALFVELE*IFPGVQ
Trigger: CTGAACTCCAGGGAAGATGCATTCTAACTCCACGAA...CAGTGCTCTTGGACCTGGAAGATCTCCCTGTGGTCTGGCCCCTTTGCCTTGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334696.11
CDS-3UTR GCA 90 bp TTGCTCTCTAGTTCAAATATCAGGAGGGCCTGGCTGAGTTTAACTCATGGCTGGTCCTGCTCGCACACCTaGAGAGGCTGTAGTCTCAGC +
Preference number: 4 (lower is better)
Translates to: LLSSSNIRRAWLSLTHGWSCSHT*RGCSLS
Trigger: GCTGAGACTACAGCCTCTGCAGGTGTGCGAGCAGGA...CCAGCCATGAGTTAAACTCAGCCAGGCCCTCCTGATATTTGAACTAGAGAGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557325.5
CDS-3UTR GCA 90 bp GTTGGAATCCAGAATGTGAGCTGGAACTATGACCAGTCTGCTGTTGTGGCTACTTCCCTCTGGGCCTATTaGTCTGCTCCCGGTAAGAGG +
Preference number: 4 (lower is better)
Translates to: VGIQNVSWNYDQSAVVATSLWAY*SAPGKR
Trigger: CCTCTTACCGGGAGCAGAGCAATAGGCCCAGAGGGA...AGTAGCCACAACAGCAGACTGGTCATAGTTCCAGCTCACATTCTGGATTCCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557325.5
CDS-3UTR CCA 90 bp AACCAAGGCAAAGGGGCCAGACCACAGGGAGATCTTCCAGGTCCAAGAGCACTGAGAGTTTTCTCAAACTaGGGCAGGAACGTGATTTGG +
Preference number: 4 (lower is better)
Translates to: NQGKGARPQGDLPGPRALRVFSN*GRNVIW
Trigger: CCAAATCACGTTCCTGCCCCAGTTTGAGAAAACTCT...CAGTGCTCTTGGACCTGGAAGATCTCCCTGTGGTCTGGCCCCTTTGCCTTGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334696.11
CDS-3UTR CCA 90 bp CAGGGAGCAATCTCATGGGCCGTCTTAGGTTGTGAAATAACAGATAGCTGGGCCAGTCATGTCCAGCTTTaGCTCTGTTGGCTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: QGAISWAVLGCEITDSWASHVQL*LCWLRL
Trigger: CAGCCTCAGCCAACAGAGCCAAAGCTGGACATGACT...GGCCCAGCTATCTGTTATTTCACAACCTAAGACGGCCCATGAGATTGCTCCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557325.5
CDS-3UTR CCA 90 bp GGCCACAGAAAACAACGTAGCCTGGCAGAGATTTCTTCCCTCTGGGCCTATTGCCAGGCACCAGAGTGTTaGGAATGGAGGCTGTTCTTT +
Preference number: 4 (lower is better)
Translates to: GHRKQRSLAEISSLWAYCQAPEC*EWRLFF
Trigger: AAAGAACAGCCTCCATTCCCAACACTCTGGTGCCTG...GCAATAGGCCCAGAGGGAAGAAATCTCTGCCAGGCTACGTTGTTTTCTGTGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557325.5
CDS-3UTR TCA 90 bp AACCAAGGCAAAGGGGCCAGACCACAGGGAGATCTTCCAGGTCCAAGAGCACTGAGGCACTCAAAGGGTTaGAATGCGATTTTTCTTTGG +
Preference number: 4 (lower is better)
Translates to: NQGKGARPQGDLPGPRALRHSKG*NAIFLW
Trigger: CCAAAGAAAAATCGCATTTCAACCCTTTGAGTGCCT...CAGTGCTCTTGGACCTGGAAGATCTCCCTGTGGTCTGGCCCCTTTGCCTTGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334696.11
CDS-3UTR TCA 90 bp ACTCAATGGAGTAATGTTAAAAATAAGGTTTCCCATGGACTGTGTGAGGGCCAGGGGCGGAGGTTGCAGTaGGCTGAGATTGCGCCACTC +
Preference number: 4 (lower is better)
Translates to: TQWSNVKNKVSHGLCEGQGRRLQ*AEIAPL
Trigger: GAGTGGCGCAATCTCAGCTCACTGCAACCTCCGCCC...CTGGCCCTCACACAGTCCATGGGAAACCTTATTTTTAACATTACTCCATTGAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334696.11
CDS-3UTR TCA 90 bp CGCTATACCTGGCCTTGTCCATTTCCTATGGCCGACTCCAGCCCTTGGGTTCATGTGTGTGCCCCATACTaGAACTTTCCTTATTGCTCT +
Preference number: 4 (lower is better)
Translates to: RYTWPCPFPMADSSPWVHVCAPY*NFPYCS
Trigger: AGAGCAATAAGGAAAGTTTCAGTATGGGGCACACAC...ATGAACCCAAGGGCTGGAGTCGGCCATAGGAAATGGACAAGGCCAGGTATAGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557325.5
CDS-3UTR GCA 90 bp TTTGGGAAGCGGGTGGATCAATTGAGATCAGGAGTTGGAAACCAGCCTGGCCAATCTGTGATGCTCTGGTaGCAGCTGTGTACTCTTGAG +
Preference number: 4 (lower is better)
Translates to: FGKRVDQLRSGVGNQPGQSVMLW*QLCTLE
Trigger: CTCAAGAGTACACAGCTGGCACCAGAGCATCACAGA...TTGGCCAGGCTGGTTTCCAACTCCTGATCTCAATTGATCCACCCGCTTCCCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334696.11
CDS-3UTR GCA 90 bp GGGCCAGACCACAGGGAGATCTTCCAGGTCCAAGAGCACTGCAGGGCAGATGAGAATTCTAGGGAATTCTaGACTGAGTACAACATTGGA +
Preference number: 4 (lower is better)
Translates to: GPDHREIFQVQEHCRADENSREF*TEYNIG
Trigger: TCCAATGTTGTACTCAGTGCAGAATTCCCTAGAATT...CTCATCTGCCCTGCAGTGCTCTTGGACCTGGAAGATCTCCCTGTGGTCTGGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334696.11
CDS-3UTR GCA 90 bp CGCTATACCTGGCCTTGTCCATTTCCTATGGCCGACTCCAGCCCTTGGGTTCATTTGAGAGTTTCCAAGTaGAGCAGAGTCTTAGCCGTT +
Preference number: 4 (lower is better)
Translates to: RYTWPCPFPMADSSPWVHLRVSK*SRVLAV
Trigger: AACGGCTAAGACTCTGCTGCACTTGGAAACTCTCAA...ATGAACCCAAGGGCTGGAGTCGGCCATAGGAAATGGACAAGGCCAGGTATAGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557325.5
CDS-3UTR CCA 90 bp ATGGCCGACTCCAGCCCTTGGGTTCATATTACCCTAGGTGATGGCAGCACCTTCAGAGTTTTCTCAAACTaGGGCAGGAACGTGATTTGG +
Preference number: 4 (lower is better)
Translates to: MADSSPWVHITLGDGSTFRVFSN*GRNVIW
Trigger: CCAAATCACGTTCCTGCCCCAGTTTGAGAAAACTCT...GAAGGTGCTGCCATCACCTAGGGTAATATGAACCCAAGGGCTGGAGTCGGCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557325.5
CDS-3UTR CCA 90 bp GGTTGTAGGTTTGCTTACTCTAAAGAACATCTTGCCCAGAAGTCTGATTTGAGAGCAACAGGTGAAAGGTaGCCCCCAAGGCCCAGCCCG +
Preference number: 4 (lower is better)
Translates to: GCRFAYSKEHLAQKSDLRATGER*PPRPSP
Trigger: CGGGCTGGGCCTTGGGGGCCACCTTTCACCTGTTGC...TCTCAAATCAGACTTCTGGGCAAGATGTTCTTTAGAGTAAGCAAACCTACAACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334696.11
CDS-3UTR CCA 90 bp TTTGGGAAGCGGGTGGATCAATTGAGATCAGGAGTTGGAAACCAGCCTGGCCAATCCACTGTACTGATGTaGGCTGAGAGAGCCAACCAA +
Preference number: 4 (lower is better)
Translates to: FGKRVDQLRSGVGNQPGQSTVLM*AERANQ
Trigger: TTGGTTGGCTCTCTCAGCCCACATCAGTACAGTGGA...TTGGCCAGGCTGGTTTCCAACTCCTGATCTCAATTGATCCACCCGCTTCCCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334696.11
CDS-3UTR CCA 90 bp TCTAGTTCAAATATCAGGAGGGCCTGGCTGAGTTTAACTCATGGCTGGCACCTGGCAGATAGGTGCAGATaGTCACAACTCCGGAGTACG +
Preference number: 4 (lower is better)
Translates to: SSSNIRRAWLSLTHGWHLADRCR*SQLRST
Trigger: CGTACTCCGGAGTTGTGACCATCTGCACCTATCTGC...CAGGTGCCAGCCATGAGTTAAACTCAGCCAGGCCCTCCTGATATTTGAACTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557325.5
CDS-3UTR CCA 90 bp CAGGGAGCAATCTCATGGGCCGTCTTAGGTTGTGAAATAACAGATAGCTGGGCCCCTCTGAGGAGTCTGTaGTCATTGATCTCTTGCCTC +
Preference number: 4 (lower is better)
Translates to: QGAISWAVLGCEITDSWAPLRSL*SLISCL
Trigger: GAGGCAAGAGATCAATGACCACAGACTCCTCAGAGG...GGCCCAGCTATCTGTTATTTCACAACCTAAGACGGCCCATGAGATTGCTCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557325.5
CDS-3UTR CCA 90 bp AGAGGTAAGATCCTGAGCTGCCATCTGGGGACTTTATTCATAGGCACTAGGTACCTTGTCCATTTCCTATaGCCGACTCCAGCCCTTGGG +
Preference number: 4 (lower is better)
Translates to: RGKILSCHLGTLFIGTRYLVHFL*PTPALG
Trigger: CCCAAGGGCTGGAGTCGGCCATAGGAAATGGACAAG...GTACCTAGTGCCTATGAATAAAGTCCCCAGATGGCAGCTCAGGATCTTACCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557325.5
CDS-3UTR TCA 90 bp ATAATAGATCCTGGAATAGCACAGACACTGACCTCTGACCACAGACCAAAAGTTAGAGACTGCAACAGGTaGAAGGTGGCCCCCAAGGCC +
Preference number: 4 (lower is better)
Translates to: IIDPGIAQTLTSDHRPKVRDCNR*KVAPKA
Trigger: GGCCTTGGGGGCCACCTTTCACCTGTTGCAGTCTCT...AACTTTTGGTCTGTGGTCAGAGGTCAGTGTCTGTGCTATTCCAGGATCTATTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334696.11
CDS-3UTR TCA 90 bp AAAACTTTTGGTTATGAGGACCAGTACCTATTCAGGCCAGCTCAAGTGGAGATGGGTAAGAGGTCCTTCTaGCCAGTCCGCCCACATGCA +
Preference number: 4 (lower is better)
Translates to: KTFGYEDQYLFRPAQVEMGKRSF*PVRPHA
Trigger: TGCATGTGGGCGGACTGGTCAGAAGGACCTCTTACC...CATCTCCACTTGAGCTGGCCTGAATAGGTACTGGTCCTCATAACCAAAAGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557325.5
CDS-3UTR TCA 90 bp ATGAGGACCAGTACCTATTCAGGCCAGCTCAAGTGGAGATGGTCTCATCGTAAATCTAGGGGCTGTGAGTaGAGCAGGCCTGATGGAATT +
Preference number: 4 (lower is better)
Translates to: MRTSTYSGQLKWRWSHRKSRGCE*SRPDGI
Trigger: AATTCCATCAGGCCTGCTTCACTCACAGCCCCTAGA...TTTACGATGAGACCATCTCCACTTGAGCTGGCCTGAATAGGTACTGGTCCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557325.5
CDS-3UTR GCA 90 bp ACTTCTGAAGCAGTTTATGAAGAGGCTGGAAGACTTAGCAGGCTCATGTGTCCATTGCAGAAGCAATCCTaGTCGCACACCTGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: TSEAVYEEAGRLSRLMCPLQKQS*SHTCRG
Trigger: GCCTCTGCAGGTGTGCGAGCAGGATTGCTTCTGCAA...TGGACACATGAGCCTGCTAAGTCTTCCAGCCTCTTCATAAACTGCTTCAGAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557325.5
CDS-3UTR GCA 90 bp GTTGGAATCCAGAATGTGAGCTGGAACTATGACCAGTCTGCTGTTGTGGCTACTACCAGTCCGCCCACATaGATGCAAGCCTTTCCTCTT +
Preference number: 4 (lower is better)
Translates to: VGIQNVSWNYDQSAVVATTSPPT*MQAFPL
Trigger: AAGAGGAAAGGCTTGCATGCATGTGGGCGGACTGGT...AGTAGCCACAACAGCAGACTGGTCATAGTTCCAGCTCACATTCTGGATTCCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557325.5
CDS-3UTR GCA 90 bp GCCGTTGGTATTGGTGTTCTTTTGACACAGCTCTCAGACACCTTGAGTTCCTTGGTCCATGCAGATAGGTaGAGATGGTCACAACTCCGG +
Preference number: 4 (lower is better)
Translates to: AVGIGVLLTQLSDTLSSLVHADR*RWSQLR
Trigger: CCGGAGTTGTGACCATCTGCACCTATCTGCATGGAC...CAAGGAACTCAAGGTGTCTGAGAGCTGTGTCAAAAGAACACCAATACCAACGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557325.5
CDS-3UTR CCA 90 bp TGTGGGCTGAGAGAGCCAACCAAATCCAAGTGGGGTTTTGTCAGGAACGGTATTTTCCCAAGATGTGGCTaGGTGGAGGCTTTTGTTGCA +
Preference number: 4 (lower is better)
Translates to: CGLREPTKSKWGFVRNGIFPRCG*VEAFVA
Trigger: TGCAACAAAAGCCTCCACCCAGCCACATCTTGGGAA...AATACCGTTCCTGACAAAACCCCACTTGGATTTGGTTGGCTCTCTCAGCCCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000334696.11
CDS-3UTR CCA 90 bp TTTGGGAAGCGGGTGGATCAATTGAGATCAGGAGTTGGAAACCAGCCTGGCCAACAAAGAGCAGAGCCTTaGCTTTGTGTTCTGGCAGTA +
Preference number: 4 (lower is better)
Translates to: FGKRVDQLRSGVGNQPGQQRAEP*LCVLAV
Trigger: TACTGCCAGAACACAAAGCCAAGGCTCTGCTCTTTG...TTGGCCAGGCTGGTTTCCAACTCCTGATCTCAATTGATCCACCCGCTTCCCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334696.11
CDS-3UTR CCA 90 bp CAGGGAGCAATCTCATGGGCCGTCTTAGGTTGTGAAATAACAGATAGCTGGGCCTGGTTGCCACCATACTaGTATTTCACACCCCCAAAG +
Preference number: 4 (lower is better)
Translates to: QGAISWAVLGCEITDSWAWLPPY*YFTPPK
Trigger: CTTTGGGGGTGTGAAATACCAGTATGGTGGCAACCA...GGCCCAGCTATCTGTTATTTCACAACCTAAGACGGCCCATGAGATTGCTCCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557325.5
CDS-3UTR CCA 90 bp AGAGGTAAGATCCTGAGCTGCCATCTGGGGACTTTATTCATAGGCACTAGGTACTCTCTGGACCTCCTCTaGCTGGTGAAGTTTTCCTCG +
Preference number: 4 (lower is better)
Translates to: RGKILSCHLGTLFIGTRYSLDLL*LVKFSS
Trigger: CGAGGAAAACTTCACCAGCCAGAGGAGGTCCAGAGA...GTACCTAGTGCCTATGAATAAAGTCCCCAGATGGCAGCTCAGGATCTTACCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557325.5
CDS-3UTR CCA 90 bp TGTGGGCTGAGAGAGCCAACCAAATCCAAGTGGGGTTTTGTCAGGAACGGTATTCTCTCTGTGATGCTCTaGTGCCAGCTGTGTACTCTT +
Preference number: 4 (lower is better)
Translates to: CGLREPTKSKWGFVRNGILSVML*CQLCTL
Trigger: AAGAGTACACAGCTGGCACCAGAGCATCACAGAGAG...AATACCGTTCCTGACAAAACCCCACTTGGATTTGGTTGGCTCTCTCAGCCCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334696.11
CDS-3UTR CCA 90 bp ATTCGCTATACCTGGCCTTGTCCATTTCCTATGGCCGACTCCAGCCCTTGGGTTAGTTTAACTCATGGCTaGCACCTGTTCAGTCATGTC +
Preference number: 4 (lower is better)
Translates to: IRYTWPCPFPMADSSPWVSLTHG*HLFSHV
Trigger: GACATGACTGAACAGGTGCCAGCCATGAGTTAAACT...AACCCAAGGGCTGGAGTCGGCCATAGGAAATGGACAAGGCCAGGTATAGCGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557325.5
CDS-3UTR CCA 90 bp GGCCACAGAAAACAACGTAGCCTGGCAGAGATTTCTTCCCTCTGGGCCTATTGCAAGACACTGCTGTCCTaGGACCTTGCTTTAGGTTTA +
Preference number: 4 (lower is better)
Translates to: GHRKQRSLAEISSLWAYCKTLLS*DLALGL
Trigger: TAAACCTAAAGCAAGGTCCCAGGACAGCAGTGTCTT...GCAATAGGCCCAGAGGGAAGAAATCTCTGCCAGGCTACGTTGTTTTCTGTGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557325.5
3UTR CAA 72 bp AAGACGATAACAGAGCAGGGCCACTCCCTTCTCACTTaGCTGCCAGAGGTCACACCTGAACTCTGCTTTATT +
Preference number: 4 (lower is better)
Translates to: KTITEQGHSLLT*LPEVTPELCFI
Trigger: AATAAAGCAGAGTTCAGGTGTGACCTCTGGCAGCAAAGTGAGAAGGGAGTGGCCCTGCTCTGTTATCGTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555829.5
3UTR CAA 72 bp GTTCTTTTGACACAGCTCTCAGACACCTTGAGTTCCTaGGTTTGGTCCACGTCCCATGAACATGCAGCAGAG +
Preference number: 4 (lower is better)
Translates to: VLLTQLSDTLSS*VWSTSHEHAAE
Trigger: CTCTGCTGCATGTTCATGGGACGTGGACCAAACCAAGGAACTCAAGGTGTCTGAGAGCTGTGTCAAAAGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557325.5
CDS-3UTR TCA 90 bp GTTGGAATCCAGAATGTGAGCTGGAACTATGACCAGTCTGCTGTTGTGGCTACTAGGATACCACCAGCATaGAAAAGACTGTGCCCCAAG +
Preference number: 4 (lower is better)
Translates to: VGIQNVSWNYDQSAVVATRIPPA*KRLCPK
Trigger: CTTGGGGCACAGTCTTTTTCATGCTGGTGGTATCCT...AGTAGCCACAACAGCAGACTGGTCATAGTTCCAGCTCACATTCTGGATTCCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557325.5
CDS-3UTR TCA 90 bp TGTGGGCTGAGAGAGCCAACCAAATCCAAGTGGGGTTTTGTCAGGAACGGTATTTGGTACCAGGAAAGGTaGCTTCCTGAAGATCTCCTT +
Preference number: 4 (lower is better)
Translates to: CGLREPTKSKWGFVRNGIWYQER*LPEDLL
Trigger: AAGGAGATCTTCAGGAAGTCACCTTTCCTGGTACCA...AATACCGTTCCTGACAAAACCCCACTTGGATTTGGTTGGCTCTCTCAGCCCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334696.11
CDS-3UTR TCA 90 bp GCCGTTGGTATTGGTGTTCTTTTGACACAGCTCTCAGACACCTTGAGTTCCTTGAGCTCTCAGACACCTTaGGTTCCTTGGTTTGGTCCA +
Preference number: 4 (lower is better)
Translates to: AVGIGVLLTQLSDTLSSLSSQTP*VPWFGP
Trigger: TGGACCAAACCAAGGAACTCAAGGTGTCTGAGAGCT...CAAGGAACTCAAGGTGTCTGAGAGCTGTGTCAAAAGAACACCAATACCAACGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557325.5
CDS-3UTR TCA 90 bp ACTTCTGAAGCAGTTTATGAAGAGGCTGGAAGACTTAGCAGGCTCATGTGTCCATGTGAGCTGGAACTATaGCCAGTCTGCTGTTGTGGC +
Preference number: 4 (lower is better)
Translates to: TSEAVYEEAGRLSRLMCPCELEL*PVCCCG
Trigger: GCCACAACAGCAGACTGGTCATAGTTCCAGCTCACA...TGGACACATGAGCCTGCTAAGTCTTCCAGCCTCTTCATAAACTGCTTCAGAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557325.5
CDS-3UTR TCA 90 bp CTCCCCAGACCGAGTGACGGTTCTCTACAGGAGCAAAGCCATTCGCTATACCTGCAAAACTTTTGGTTATaGGGACCAGTACCTATTCAG +
Preference number: 4 (lower is better)
Translates to: LPRPSDGSLQEQSHSLYLQNFWL*GPVPIQ
Trigger: CTGAATAGGTACTGGTCCTCATAACCAAAAGTTTTG...CAGGTATAGCGAATGGCTTTGCTCCTGTAGAGAACCGTCACTCGGTCTGGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000557325.5
CDS-3UTR GCA 90 bp GATCCTAGTTGTGAGGAATGTCTTGCAGGAGTACTGGAAAGAAGGACTAGAGCATGTGGGAGACAGCGCTaGAAACACAGGATACCACCA +
Preference number: 4 (lower is better)
Translates to: DPSCEECLAGVLERRTRACGRQR*KHRIPP
Trigger: TGGTGGTATCCTGTGTTTGCAGCGCTGTCTCCCACA...TGCTCTAGTCCTTCTTTCCAGTACTCCTGCAAGACATTCCTCACAACTAGGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556242.5
CDS-3UTR GCA 90 bp CACCTTGTTTGTCTTGTGGCTGATGCTGCTCAGTGGAGTGATGCTGACCACACGGTCACACCTGAACTCTaGTTTATTCTTAGGGATGCA +
Preference number: 4 (lower is better)
Translates to: HLVCLVADAAQWSDADHTVTPEL*FILRDA
Trigger: TGCATCCCTAAGAATAAAGCAGAGTTCAGGTGTGAC...CGTGTGGTCAGCATCACTCCACTGAGCAGCATCAGCCACAAGACAAACAAGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555829.5
CDS-3UTR GCA 90 bp ATTCCCTGCTACTCACATTTCACCTTGTTTGTCTTGTGGCTGATGCTGCTCAGTCATCGACACAGCTGGTaGCATGCTGCAGTATGCTGT +
Preference number: 4 (lower is better)
Translates to: IPCYSHFTLFVLWLMLLSHRHSW*HAAVCC
Trigger: ACAGCATACTGCAGCATGGCACCAGCTGTGTCGATG...ACTGAGCAGCATCAGCCACAAGACAAACAAGGTGAAATGTGAGTAGCAGGGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555829.5
CDS-3UTR CCA 90 bp TCTAGTTCAAATATCAGGAGGGCCTGGCTGAGTTTAACTCATGGCTGGCACCTGCTGTGCCCCAAGAAGTaGCCATTCTTTTCCCAAGAT +
Preference number: 4 (lower is better)
Translates to: SSSNIRRAWLSLTHGWHLLCPKK*PFFSQD
Trigger: ATCTTGGGAAAAGAATGGCCACTTCTTGGGGCACAG...CAGGTGCCAGCCATGAGTTAAACTCAGCCAGGCCCTCCTGATATTTGAACTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557325.5
CDS-3UTR CCA 90 bp CTGCTCACAAGCTTCCCTTTTTGCATGGTAGCCATTCCTAACCCTACATCAGAATCAAACCAAGTCTGCTaGTTCCTGTGGGAGACAGCG +
Preference number: 4 (lower is better)
Translates to: LLTSFPFCMVAIPNPTSESNQVC*FLWETA
Trigger: CGCTGTCTCCCACAGGAACCAGCAGACTTGGTTTGA...TTCTGATGTAGGGTTAGGAATGGCTACCATGCAAAAAGGGAAGCTTGTGAGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557325.5
CDS-3UTR CCA 90 bp AACCAAGGCAAAGGGGCCAGACCACAGGGAGATCTTCCAGGTCCAAGAGCACTGCAGTGCAGTTCCAAATaGAATAAGCTGTTTGAACAT +
Preference number: 4 (lower is better)
Translates to: NQGKGARPQGDLPGPRALQCSSK*NKLFEH
Trigger: ATGTTCAAACAGCTTATTCCATTTGGAACTGCACTG...CAGTGCTCTTGGACCTGGAAGATCTCCCTGTGGTCTGGCCCCTTTGCCTTGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334696.11
CDS-3UTR CCA 90 bp AACCAAGGCAAAGGGGCCAGACCACAGGGAGATCTTCCAGGTCCAAGAGCACTGTTTCCATTTTATTTATaGTTCCTCTCTGGGACACCA +
Preference number: 4 (lower is better)
Translates to: NQGKGARPQGDLPGPRALFPFYL*FLSGTP
Trigger: TGGTGTCCCAGAGAGGAACCATAAATAAAATGGAAA...CAGTGCTCTTGGACCTGGAAGATCTCCCTGTGGTCTGGCCCCTTTGCCTTGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334696.11
3UTR CAA 72 bp AGCTCCAGTGTGTGCCCCATACTGAAACTTTCCTTATaGCTCTCTAGTTCAAATATCAGGAGGGCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: SSSVCPILKLSL*LSSSNIRRAWL
Trigger: CAGCCAGGCCCTCCTGATATTTGAACTAGAGAGCAATAAGGAAAGTTTCAGTATGGGGCACACACTGGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557325.5
CDS-3UTR TCA 90 bp ACTTCTGAAGCAGTTTATGAAGAGGCTGGAAGACTTAGCAGGCTCATGTGTCCACTGTGGCCATGCAGCTaGCCTGTCAGAAAATTCACA +
Preference number: 4 (lower is better)
Translates to: TSEAVYEEAGRLSRLMCPLWPCS*PVRKFT
Trigger: TGTGAATTTTCTGACAGGTCAGCTGCATGGCCACAG...TGGACACATGAGCCTGCTAAGTCTTCCAGCCTCTTCATAAACTGCTTCAGAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557325.5
CDS-3UTR TCA 90 bp GAAAACCAGGTCTCATTAATGCTAGTTATTACTTTATCACAGCACCAGATTTCCACTGGGGCAGGAACGTaGTTTGGGTGGAGGCTCCCC +
Preference number: 4 (lower is better)
Translates to: ENQVSLMLVITLSQHQISTGAGT*FGWRLP
Trigger: GGGGAGCCTCCACCCAAATCACGTTCCTGCCCCAGT...GGAAATCTGGTGCTGTGATAAAGTAATAACTAGCATTAATGAGACCTGGTTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334696.11
CDS-3UTR TCA 90 bp ACCAGTACCTATTCAGGCCAGCTCAAGTGGAGATGGTCTCATCGTAAATCCTGTCAGGAAAGGACTGCCTaGGGTGAAGTTTTCCAAGTT +
Preference number: 4 (lower is better)
Translates to: TSTYSGQLKWRWSHRKSCQERTA*GEVFQV
Trigger: AACTTGGAAAACTTCACCTCAGGCAGTCCTTTCCTG...ACAGGATTTACGATGAGACCATCTCCACTTGAGCTGGCCTGAATAGGTACTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557325.5
CDS-3UTR TCA 90 bp TTTGGGAAGCGGGTGGATCAATTGAGATCAGGAGTTGGAAACCAGCCTGGCCAAGTATACTGGACTTTCTaGAAGGAAAACCAGGTCTCA +
Preference number: 4 (lower is better)
Translates to: FGKRVDQLRSGVGNQPGQVYWTF*KENQVS
Trigger: TGAGACCTGGTTTTCCTTTCAGAAAGTCCAGTATAC...TTGGCCAGGCTGGTTTCCAACTCCTGATCTCAATTGATCCACCCGCTTCCCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334696.11
CDS-3UTR GCA 90 bp AAAGAGAGCATGAGGGACATTAAATATGGTTCTCCCTGGAAATGTTGGTCCACTTTGCAGAAGCAATCCTaGTCGCACACCTGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: KESMRDIKYGSPWKCWSTLQKQS*SHTCRG
Trigger: GCCTCTGCAGGTGTGCGAGCAGGATTGCTTCTGCAA...AGTGGACCAACATTTCCAGGGAGAACCATATTTAATGTCCCTCATGCTCTCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334696.11
CDS-3UTR GCA 90 bp ATCCTAGTTGTGAGGAATGTCTTGCAGGAGTACTGGAAAGAAGGACTAGAGCAACCCTCAAACCAAGTCTaGTGGTTCCTGTGGGAGACA +
Preference number: 4 (lower is better)
Translates to: ILVVRNVLQEYWKEGLEQPSNQV*WFLWET
Trigger: TGTCTCCCACAGGAACCAGCAGACTTGGTTTGAGGG...TTGCTCTAGTCCTTCTTTCCAGTACTCCTGCAAGACATTCCTCACAACTAGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556242.5
CDS-3UTR GCA 90 bp ATGAGGACCAGTACCTATTCAGGCCAGCTCAAGTGGAGATGGTCTCATCGTAAAGCTGTCCTGGGACCTTaGTTTAGGTTTAGTTATGGC +
Preference number: 4 (lower is better)
Translates to: MRTSTYSGQLKWRWSHRKAVLGP*FRFSYG
Trigger: GCCATAACTAAACCTAAAGCAAGGTCCCAGGACAGC...TTTACGATGAGACCATCTCCACTTGAGCTGGCCTGAATAGGTACTGGTCCTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557325.5
CDS-3UTR CCA 90 bp CTCCCCAGACCGAGTGACGGTTCTCTACAGGAGCAAAGCCATTCGCTATACCTGTTTCAACCTTACATCTaGATACAAGTCCTACCTAAC +
Preference number: 4 (lower is better)
Translates to: LPRPSDGSLQEQSHSLYLFQPYI*IQVLPN
Trigger: GTTAGGTAGGACTTGTATCCAGATGTAAGGTTGAAA...CAGGTATAGCGAATGGCTTTGCTCCTGTAGAGAACCGTCACTCGGTCTGGGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557325.5
CDS-3UTR CCA 90 bp TCACTGCTCACCATGCCTTCAACTGCCATGTTTATACATCATACCCTACAGAACTCAAACCAAGTCTGCTaGTTCCTGTGGGAGACAGCG +
Preference number: 4 (lower is better)
Translates to: SLLTMPSTAMFIHHTLQNSNQVC*FLWETA
Trigger: CGCTGTCTCCCACAGGAACCAGCAGACTTGGTTTGA...GTTCTGTAGGGTATGATGTATAAACATGGCAGTTGAAGGCATGGTGAGCAGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556242.5
CDS-3UTR CCA 90 bp AAAGAGAGCATGAGGGACATTAAATATGGTTCTCCCTGGAAATGTTGGTCCACTAGTACGTGGCCTCAATaGGAGATGCCCAGAGACTGC +
Preference number: 4 (lower is better)
Translates to: KESMRDIKYGSPWKCWSTSTWPQ*EMPRDC
Trigger: GCAGTCTCTGGGCATCTCCCATTGAGGCCACGTACT...AGTGGACCAACATTTCCAGGGAGAACCATATTTAATGTCCCTCATGCTCTCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334696.11
CDS-3UTR CCA 90 bp GCAGCAGAGCTAGTTAGCATGGATGAGGAAAAATTTGTGGATGCCGTTAACTCTGAGATTTCTTCCCTCTaGGCCTATTGCTCTGCTCCC +
Preference number: 4 (lower is better)
Translates to: AAELVSMDEEKFVDAVNSEISSL*AYCSAP
Trigger: GGGAGCAGAGCAATAGGCCCAGAGGGAAGAAATCTC...AGAGTTAACGGCATCCACAAATTTTTCCTCATCCATGCTAACTAGCTCTGCTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557325.5
CDS-3UTR CCA 90 bp CTGCTCACAAGCTTCCCTTTTTGCATGGTAGCCATTCCTAACCCTACATCAGAAAGTACGGCAGGCTGTTaGAATCCAGAATGTGAGCTG +
Preference number: 4 (lower is better)
Translates to: LLTSFPFCMVAIPNPTSESTAGC*NPECEL
Trigger: CAGCTCACATTCTGGATTCCAACAGCCTGCCGTACT...TTCTGATGTAGGGTTAGGAATGGCTACCATGCAAAAAGGGAAGCTTGTGAGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557325.5
CDS-3UTR CCA 90 bp ACCAGTACCTATTCAGGCCAGCTCAAGTGGAGATGGTCTCATCGTAAATCCTGTGCTGAGTTTAACTCATaGCTGGCACCTGTTCAGTCA +
Preference number: 4 (lower is better)
Translates to: TSTYSGQLKWRWSHRKSCAEFNS*LAPVQS
Trigger: TGACTGAACAGGTGCCAGCCATGAGTTAAACTCAGC...ACAGGATTTACGATGAGACCATCTCCACTTGAGCTGGCCTGAATAGGTACTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557325.5
CDS-3UTR CCA 90 bp AAAACAGAAGAGAGAGCTGGTTACCAAAAGTTAGGCTGCTTCAGATGCTGGGCTCTGCTACCATTTCTCTaGTGGACACCTAACTCCTCC +
Preference number: 4 (lower is better)
Translates to: KTEERAGYQKLGCFRCWALLPFL*WTPNSS
Trigger: GGAGGAGTTAGGTGTCCACCAGAGAAATGGTAGCAG...AGCCCAGCATCTGAAGCAGCCTAACTTTTGGTAACCAGCTCTCTCTTCTGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556242.5
CDS-3UTR TCA 90 bp CACTCCCTTCTCACTTTGCTGCCAGAGGTCACACCTGAACTCTGCTTTATTCTTAAGGACTGCCTGAGGTaGAGTTTTCCAAGTTATCAC +
Preference number: 4 (lower is better)
Translates to: HSLLTLLPEVTPELCFILKDCLR*SFPSYH
Trigger: GTGATAACTTGGAAAACTTCACCTCAGGCAGTCCTT...AAGAATAAAGCAGAGTTCAGGTGTGACCTCTGGCAGCAAAGTGAGAAGGGAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555829.5
CDS-3UTR TCA 90 bp TTGCTCTCTAGTTCAAATATCAGGAGGGCCTGGCTGAGTTTAACTCATGGCTGGAAGGACTGCCTGAGGTaGAGTTTTCCAAGTTATCAC +
Preference number: 4 (lower is better)
Translates to: LLSSSNIRRAWLSLTHGWKDCLR*SFPSYH
Trigger: GTGATAACTTGGAAAACTTCACCTCAGGCAGTCCTT...CCAGCCATGAGTTAAACTCAGCCAGGCCCTCCTGATATTTGAACTAGAGAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557325.5
CDS-3UTR TCA 90 bp TACTCACATTTCACCTTGTTTGTCTTGTGGCTGATGCTGCTCAGTGGAGTGATGCAGGAAAGGACTGCCTaGGGTGAAGTTTTCCAAGTT +
Preference number: 4 (lower is better)
Translates to: YSHFTLFVLWLMLLSGVMQERTA*GEVFQV
Trigger: AACTTGGAAAACTTCACCTCAGGCAGTCCTTTCCTG...CATCACTCCACTGAGCAGCATCAGCCACAAGACAAACAAGGTGAAATGTGAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555829.5
CDS-3UTR GCA 90 bp GGTTGTAGGTTTGCTTACTCTAAAGAACATCTTGCCCAGAAGTCTGATTTGAGAGGCCTCAATGGGAGATaGCCAGAGACTGCAACAGGT +
Preference number: 4 (lower is better)
Translates to: GCRFAYSKEHLAQKSDLRGLNGR*PETATG
Trigger: ACCTGTTGCAGTCTCTGGGCATCTCCCATTGAGGCC...TCTCAAATCAGACTTCTGGGCAAGATGTTCTTTAGAGTAAGCAAACCTACAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334696.11
CDS-3UTR GCA 90 bp TTTGGGAAGCGGGTGGATCAATTGAGATCAGGAGTTGGAAACCAGCCTGGCCAAAGTTCAGAAACTAAGTaGTCTCTCCTCCCCTTAAAA +
Preference number: 4 (lower is better)
Translates to: FGKRVDQLRSGVGNQPGQSSETK*SLLPLK
Trigger: TTTTAAGGGGAGGAGAGAGCACTTAGTTTCTGAACT...TTGGCCAGGCTGGTTTCCAACTCCTGATCTCAATTGATCCACCCGCTTCCCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334696.11
CDS-3UTR GCA 90 bp TTTGGGAAGCGGGTGGATCAATTGAGATCAGGAGTTGGAAACCAGCCTGGCCAAGATGGGTCTTGGGATTaGAATAAGTCAGTTTACCAT +
Preference number: 4 (lower is better)
Translates to: FGKRVDQLRSGVGNQPGQDGSWD*NKSVYH
Trigger: ATGGTAAACTGACTTATTGCAATCCCAAGACCCATC...TTGGCCAGGCTGGTTTCCAACTCCTGATCTCAATTGATCCACCCGCTTCCCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334696.11
CDS-3UTR GCA 90 bp ATAATAGATCCTGGAATAGCACAGACACTGACCTCTGACCACAGACCAAAAGTTACTCCTGGCGGAGACTaGAGGGACAAGGTCATCTTT +
Preference number: 4 (lower is better)
Translates to: IIDPGIAQTLTSDHRPKVTPGGD*RDKVIF
Trigger: AAAGATGACCTTGTCCCTGCAGTCTCCGCCAGGAGT...AACTTTTGGTCTGTGGTCAGAGGTCAGTGTCTGTGCTATTCCAGGATCTATTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334696.11
CDS-3UTR CCA 90 bp CGCTATACCTGGCCTTGTCCATTTCCTATGGCCGACTCCAGCCCTTGGGTTCATTATCACACACTTCCCTaGCTTTTCTTTCAAAATCTT +
Preference number: 4 (lower is better)
Translates to: RYTWPCPFPMADSSPWVHYHTLP*LFFQNL
Trigger: AAGATTTTGAAAGAAAAGCCAGGGAAGTGTGTGATA...ATGAACCCAAGGGCTGGAGTCGGCCATAGGAAATGGACAAGGCCAGGTATAGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557325.5
CDS-3UTR CCA 90 bp GGTTGTAGGTTTGCTTACTCTAAAGAACATCTTGCCCAGAAGTCTGATTTGAGACTCCAAGGAAGTACGTaGCCTCAATGGGAGATGCCC +
Preference number: 4 (lower is better)
Translates to: GCRFAYSKEHLAQKSDLRLQGST*PQWEMP
Trigger: GGGCATCTCCCATTGAGGCCACGTACTTCCTTGGAG...TCTCAAATCAGACTTCTGGGCAAGATGTTCTTTAGAGTAAGCAAACCTACAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334696.11
CDS-3UTR CCA 90 bp TGTGGGCTGAGAGAGCCAACCAAATCCAAGTGGGGTTTTGTCAGGAACGGTATTGAAAGCCACAAGTTTTaGGGAAATACACTCCTGCAA +
Preference number: 4 (lower is better)
Translates to: CGLREPTKSKWGFVRNGIESHKF*GNTLLQ
Trigger: TTGCAGGAGTGTATTTCCCCAAAACTTGTGGCTTTC...AATACCGTTCCTGACAAAACCCCACTTGGATTTGGTTGGCTCTCTCAGCCCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000334696.11
CDS-3UTR CCA 90 bp AAAGAGAGCATGAGGGACATTAAATATGGTTCTCCCTGGAAATGTTGGTCCACTAGACTGGTGGCCAACTaGAGGGAGGGGAGTTTTACT +
Preference number: 4 (lower is better)
Translates to: KESMRDIKYGSPWKCWSTRLVAN*REGSFT
Trigger: AGTAAAACTCCCCTCCCTCCAGTTGGCCACCAGTCT...AGTGGACCAACATTTCCAGGGAGAACCATATTTAATGTCCCTCATGCTCTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334696.11
CDS-3UTR CCA 90 bp GTTGGAATCCAGAATGTGAGCTGGAACTATGACCAGTCTGCTGTTGTGGCTACTTTGAGTTCCTTGGTTTaGTCCACGTCCCATGAACAT +
Preference number: 4 (lower is better)
Translates to: VGIQNVSWNYDQSAVVATLSSLV*STSHEH
Trigger: ATGTTCATGGGACGTGGACCAAACCAAGGAACTCAA...AGTAGCCACAACAGCAGACTGGTCATAGTTCCAGCTCACATTCTGGATTCCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557325.5
CDS-3UTR CCA 90 bp AGAGGTAAGATCCTGAGCTGCCATCTGGGGACTTTATTCATAGGCACTAGGTACACCAGTCTGCTGTTGTaGCTACTCTGCATTTATCAG +
Preference number: 4 (lower is better)
Translates to: RGKILSCHLGTLFIGTRYTSLLL*LLCIYQ
Trigger: CTGATAAATGCAGAGTAGCCACAACAGCAGACTGGT...GTACCTAGTGCCTATGAATAAAGTCCCCAGATGGCAGCTCAGGATCTTACCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557325.5
CDS-3UTR CCA 90 bp CTGCTCACAAGCTTCCCTTTTTGCATGGTAGCCATTCCTAACCCTACATCAGAAAATATCAGGAGGGCCTaGCTGAGTTTAACTCATGGC +
Preference number: 4 (lower is better)
Translates to: LLTSFPFCMVAIPNPTSENIRRA*LSLTHG
Trigger: GCCATGAGTTAAACTCAGCCAGGCCCTCCTGATATT...TTCTGATGTAGGGTTAGGAATGGCTACCATGCAAAAAGGGAAGCTTGTGAGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557325.5
3UTR CAA 72 bp TTAATTCCCTGCTACTCACATTTCACCTTGTTTGTCTaGTGGCTGATGCTGCTCAGTGGAGTGATGCTGACC +
Preference number: 4 (lower is better)
Translates to: LIPCYSHFTLFV*WLMLLSGVMLT
Trigger: GGTCAGCATCACTCCACTGAGCAGCATCAGCCACAAGACAAACAAGGTGAAATGTGAGTAGCAGGGAATTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555829.5
3UTR CAA 72 bp GGTATTGGTGTTCTTTTGACACAGCTCTCAGACACCTaGAGTTCCTTGGTTTGGTCCACGTCCCATGAACAT +
Preference number: 4 (lower is better)
Translates to: GIGVLLTQLSDT*SSLVWSTSHEH
Trigger: ATGTTCATGGGACGTGGACCAAACCAAGGAACTCAAGGTGTCTGAGAGCTGTGTCAAAAGAACACCAATACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557325.5
3UTR CAA 72 bp TGCAGCAGAGTCTTAGCCGTTGGTATTGGTGTTCTTTaGACACAGCTCTCAGACACCTTGAGTTCCTTGGTT +
Preference number: 4 (lower is better)
Translates to: CSRVLAVGIGVL*TQLSDTLSSLV
Trigger: AACCAAGGAACTCAAGGTGTCTGAGAGCTGTGTCAAAAGAACACCAATACCAACGGCTAAGACTCTGCTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557325.5
CDS-3UTR TCA 90 bp ACTCAATGGAGTAATGTTAAAAATAAGGTTTCCCATGGACTGTGTGAGGGCCAGAGGATACCACCAGCATaGAAAAGACTGTGCCCCAAG +
Preference number: 4 (lower is better)
Translates to: TQWSNVKNKVSHGLCEGQRIPPA*KRLCPK
Trigger: CTTGGGGCACAGTCTTTTTCATGCTGGTGGTATCCT...CTGGCCCTCACACAGTCCATGGGAAACCTTATTTTTAACATTACTCCATTGAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000334696.11
CDS-3UTR TCA 90 bp CTGCTCACAAGCTTCCCTTTTTGCATGGTAGCCATTCCTAACCCTACATCAGAAGCACCCTGCTTAGGTTaGTCTACAAAAGCAGAAAGT +
Preference number: 4 (lower is better)
Translates to: LLTSFPFCMVAIPNPTSEAPCLG*STKAES
Trigger: ACTTTCTGCTTTTGTAGATCAACCTAAGCAGGGTGC...TTCTGATGTAGGGTTAGGAATGGCTACCATGCAAAAAGGGAAGCTTGTGAGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557325.5
CDS-3UTR TCA 90 bp ATAATAGATCCTGGAATAGCACAGACACTGACCTCTGACCACAGACCAAAAGTTCTGTGGCCATGCAGCTaGCCTGTCAGAAAATTCACA +
Preference number: 4 (lower is better)
Translates to: IIDPGIAQTLTSDHRPKVLWPCS*PVRKFT
Trigger: TGTGAATTTTCTGACAGGTCAGCTGCATGGCCACAG...AACTTTTGGTCTGTGGTCAGAGGTCAGTGTCTGTGCTATTCCAGGATCTATTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334696.11
CDS-3UTR TCA 90 bp GAAAACAAGTTTAGAATCATAGAAAACACTGTTAACACATTAGCCTGGGAGGTGTCACAGGGCTCTCTGTaGTGCTCTGGTGCCAGCTGT +
Preference number: 4 (lower is better)
Translates to: ENKFRIIENTVNTLAWEVSQGSL*CSGASC
Trigger: ACAGCTGGCACCAGAGCATCACAGAGAGCCCTGTGA...CACCTCCCAGGCTAATGTGTTAACAGTGTTTTCTATGATTCTAAACTTGTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334696.11
CDS-3UTR TCA 90 bp ACTCAATGGAGTAATGTTAAAAATAAGGTTTCCCATGGACTGTGTGAGGGCCAGTGGCTCTCAGCTGGCTaGTTGGAGCTAACACAGAAT +
Preference number: 4 (lower is better)
Translates to: TQWSNVKNKVSHGLCEGQWLSAG*LELTQN
Trigger: ATTCTGTGTTAGCTCCAATCAGCCAGCTGAGAGCCA...CTGGCCCTCACACAGTCCATGGGAAACCTTATTTTTAACATTACTCCATTGAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334696.11
CDS-3UTR TCA 90 bp ATAATAGATCCTGGAATAGCACAGACACTGACCTCTGACCACAGACCAAAAGTTTGTACTGATGTGGGCTaGGAGAGCCAACCAAATCCA +
Preference number: 4 (lower is better)
Translates to: IIDPGIAQTLTSDHRPKVCTDVG*ESQPNP
Trigger: TGGATTTGGTTGGCTCTCTCAGCCCACATCAGTACA...AACTTTTGGTCTGTGGTCAGAGGTCAGTGTCTGTGCTATTCCAGGATCTATTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334696.11
CDS-3UTR TCA 90 bp AAAGAGAGCATGAGGGACATTAAATATGGTTCTCCCTGGAAATGTTGGTCCACTCAGAGGTATTTGGGATaGCCAAAGGAGTCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: KESMRDIKYGSPWKCWSTQRYLG*PKESAG
Trigger: TCCAGCAGACTCCTTTGGTCATCCCAAATACCTCTG...AGTGGACCAACATTTCCAGGGAGAACCATATTTAATGTCCCTCATGCTCTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334696.11
CDS-3UTR TCA 90 bp TCTAGTTCAAATATCAGGAGGGCCTGGCTGAGTTTAACTCATGGCTGGCACCTGTTAACTCTGCCTTTGTaGGTATCAATTTACCCAGCT +
Preference number: 4 (lower is better)
Translates to: SSSNIRRAWLSLTHGWHLLTLPL*VSIYPA
Trigger: AGCTGGGTAAATTGATACTCACAAAGGCAGAGTTAA...CAGGTGCCAGCCATGAGTTAAACTCAGCCAGGCCCTCCTGATATTTGAACTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557325.5
CDS-3UTR TCA 90 bp ATTTTTAATTCCCTGCTACTCACATTTCACCTTGTTTGTCTTGTGGCTGATGCTATGCTGTCAGCCTTCTaGAGCCCACTAAGGTCTCGG +
Preference number: 4 (lower is better)
Translates to: IFNSLLLTFHLVCLVADAMLSAF*SPLRSR
Trigger: CCGAGACCTTAGTGGGCTTCAGAAGGCTGACAGCAT...AGCATCAGCCACAAGACAAACAAGGTGAAATGTGAGTAGCAGGGAATTAAAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555829.5
CDS-3UTR TCA 90 bp ATCCTAGTTGTGAGGAATGTCTTGCAGGAGTACTGGAAAGAAGGACTAGAGCAAATCCAGGAGATTAGCTaGGGAGAGAAAGCTGATCTC +
Preference number: 4 (lower is better)
Translates to: ILVVRNVLQEYWKEGLEQIQEIS*GEKADL
Trigger: GAGATCAGCTTTCTCTCCTCAGCTAATCTCCTGGAT...TTGCTCTAGTCCTTCTTTCCAGTACTCCTGCAAGACATTCCTCACAACTAGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556242.5
CDS-3UTR GCA 90 bp GAAAACAAGTTTAGAATCATAGAAAACACTGTTAACACATTAGCCTGGGAGGTGGCCCAAAGGGTCTACTaGAGGCAGGATGGGCGTTAC +
Preference number: 4 (lower is better)
Translates to: ENKFRIIENTVNTLAWEVAQRVY*RQDGRY
Trigger: GTAACGCCCATCCTGCCTGCAGTAGACCCTTTGGGC...CACCTCCCAGGCTAATGTGTTAACAGTGTTTTCTATGATTCTAAACTTGTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334696.11
CDS-3UTR GCA 90 bp TTGAGAGTTTCCAAGTGCAGCAGAGTCTTAGCCGTTGGTATTGGTGTTCTTTTGGGTAAGATCCTGAGCTaGCATCTGGGGACTTTATTC +
Preference number: 4 (lower is better)
Translates to: LRVSKCSRVLAVGIGVLLGKILS*HLGTLF
Trigger: GAATAAAGTCCCCAGATGGCAGCTCAGGATCTTACC...CAAAAGAACACCAATACCAACGGCTAAGACTCTGCTGCACTTGGAAACTCTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557325.5
CDS-3UTR GCA 90 bp AGAGGTAAGATCCTGAGCTGCCATCTGGGGACTTTATTCATAGGCACTAGGTACCTGATGGAATTATCCTaGCACACAACAATCAGAGCT +
Preference number: 4 (lower is better)
Translates to: RGKILSCHLGTLFIGTRYLMELS*HTTIRA
Trigger: AGCTCTGATTGTTGTGTGGCAGGATAATTCCATCAG...GTACCTAGTGCCTATGAATAAAGTCCCCAGATGGCAGCTCAGGATCTTACCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557325.5
CDS-3UTR CCA 90 bp TTAATTTTATCCAGGAGATTAGCTGAGGAGAGAAAGCTGATCTCACACATGATCGTCTGCTGGTTCCTGTaGGAGACAGCGCTGCAAACA +
Preference number: 4 (lower is better)
Translates to: LILSRRLAEERKLISHMIVCWFL*ETALQT
Trigger: TGTTTGCAGCGCTGTCTCCCACAGGAACCAGCAGAC...GATCATGTGTGAGATCAGCTTTCTCTCCTCAGCTAATCTCCTGGATAAAATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556242.5
CDS-3UTR CCA 90 bp GCCGTTGGTATTGGTGTTCTTTTGACACAGCTCTCAGACACCTTGAGTTCCTTGAATTGGAAGCTGTCCTaGCATTTTCTGCACAAAGGT +
Preference number: 4 (lower is better)
Translates to: AVGIGVLLTQLSDTLSSLNWKLS*HFLHKG
Trigger: ACCTTTGTGCAGAAAATGCCAGGACAGCTTCCAATT...CAAGGAACTCAAGGTGTCTGAGAGCTGTGTCAAAAGAACACCAATACCAACGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557325.5
CDS-3UTR CCA 90 bp GCAGCAGAGCTAGTTAGCATGGATGAGGAAAAATTTGTGGATGCCGTTAACTCTCAAAGAGCAGAGCCTTaGCTTTGTGTTCTGGCAGTA +
Preference number: 4 (lower is better)
Translates to: AAELVSMDEEKFVDAVNSQRAEP*LCVLAV
Trigger: TACTGCCAGAACACAAAGCCAAGGCTCTGCTCTTTG...AGAGTTAACGGCATCCACAAATTTTTCCTCATCCATGCTAACTAGCTCTGCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557325.5
CDS-3UTR CCA 90 bp AGTGATGCTGACCACACGGACTTCATCGACACAGCTGGTGCCATGCTGCAGTATTATCACACACTTCCCTaGCTTTTCTTTCAAAATCTT +
Preference number: 4 (lower is better)
Translates to: SDADHTDFIDTAGAMLQYYHTLP*LFFQNL
Trigger: AAGATTTTGAAAGAAAAGCCAGGGAAGTGTGTGATA...ATACTGCAGCATGGCACCAGCTGTGTCGATGAAGTCCGTGTGGTCAGCATCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555829.5
CDS-3UTR CCA 90 bp GAAAACCAGGTCTCATTAATGCTAGTTATTACTTTATCACAGCACCAGATTTCCCCAGGGACCTGTCCCTaGGCTCTCACTCCAAGGTTA +
Preference number: 4 (lower is better)
Translates to: ENQVSLMLVITLSQHQISPGTCP*ALTPRL
Trigger: TAACCTTGGAGTGAGAGCCCAGGGACAGGTCCCTGG...GGAAATCTGGTGCTGTGATAAAGTAATAACTAGCATTAATGAGACCTGGTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334696.11
CDS-3UTR CCA 90 bp CTGCTCACAAGCTTCCCTTTTTGCATGGTAGCCATTCCTAACCCTACATCAGAAGAAAACAACGTAGCCTaGCAGAGATTTCTTCCCTCT +
Preference number: 4 (lower is better)
Translates to: LLTSFPFCMVAIPNPTSEENNVA*QRFLPS
Trigger: AGAGGGAAGAAATCTCTGCCAGGCTACGTTGTTTTC...TTCTGATGTAGGGTTAGGAATGGCTACCATGCAAAAAGGGAAGCTTGTGAGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557325.5
CDS-3UTR CCA 90 bp AAAACTTTTGGTTATGAGGACCAGTACCTATTCAGGCCAGCTCAAGTGGAGATGGCCATTCGCTATACCTaGCCTTGTCCATTTCCTATG +
Preference number: 4 (lower is better)
Translates to: KTFGYEDQYLFRPAQVEMAIRYT*PCPFPM
Trigger: CATAGGAAATGGACAAGGCCAGGTATAGCGAATGGC...CATCTCCACTTGAGCTGGCCTGAATAGGTACTGGTCCTCATAACCAAAAGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557325.5
CDS-3UTR CCA 90 bp TTTAATTCCCTGCTACTCACATTTCACCTTGTTTGTCTTGTGGCTGATGCTGCTTGTCAACATGGGCTTTaGGGATATCTCCAGCTTGGC +
Preference number: 4 (lower is better)
Translates to: FNSLLLTFHLVCLVADAACQHGL*GYLQLG
Trigger: GCCAAGCTGGAGATATCCCCAAAGCCCATGTTGACA...AGCAGCATCAGCCACAAGACAAACAAGGTGAAATGTGAGTAGCAGGGAATTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555829.5
CDS-3UTR TCA 90 bp ACTCAATGGAGTAATGTTAAAAATAAGGTTTCCCATGGACTGTGTGAGGGCCAGCAGGAAAGGACTGCCTaGGGTGAAGTTTTCCAAGTT +
Preference number: 4 (lower is better)
Translates to: TQWSNVKNKVSHGLCEGQQERTA*GEVFQV
Trigger: AACTTGGAAAACTTCACCTCAGGCAGTCCTTTCCTG...CTGGCCCTCACACAGTCCATGGGAAACCTTATTTTTAACATTACTCCATTGAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334696.11
CDS-3UTR TCA 90 bp GCAGCAGAGCTAGTTAGCATGGATGAGGAAAAATTTGTGGATGCCGTTAACTCTGTATTGGTGTTCTTTTaGCACAGCTCTCAGACACCT +
Preference number: 4 (lower is better)
Translates to: AAELVSMDEEKFVDAVNSVLVFF*HSSQTP
Trigger: AGGTGTCTGAGAGCTGTGTCAAAAGAACACCAATAC...AGAGTTAACGGCATCCACAAATTTTTCCTCATCCATGCTAACTAGCTCTGCTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557325.5
CDS-3UTR TCA 90 bp GCCGTTGGTATTGGTGTTCTTTTGACACAGCTCTCAGACACCTTGAGTTCCTTGTTGTCTTTTTATGCTTaGGAGTTTCCAAGTGCAGCA +
Preference number: 4 (lower is better)
Translates to: AVGIGVLLTQLSDTLSSLLSFYA*EFPSAA
Trigger: TGCTGCACTTGGAAACTCTCAAGCATAAAAAGACAA...CAAGGAACTCAAGGTGTCTGAGAGCTGTGTCAAAAGAACACCAATACCAACGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557325.5
CDS-3UTR TCA 90 bp GATCCTAGTTGTGAGGAATGTCTTGCAGGAGTACTGGAAAGAAGGACTAGAGCATCTTCTGCGCTTACATaGACAAATACAACTGATGGC +
Preference number: 4 (lower is better)
Translates to: DPSCEECLAGVLERRTRASSALT*TNTTDG
Trigger: GCCATCAGTTGTATTTGTTCATGTAAGCGCAGAAGA...TGCTCTAGTCCTTCTTTCCAGTACTCCTGCAAGACATTCCTCACAACTAGGATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556242.5
CDS-3UTR GCA 90 bp GAGAGAAAGCTGATCTCACACATGATCTCAATCTCATTAGTGAATAGCATGAAATTGCAGAAGCAATCCTaGTCGCACACCTGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: ERKLISHMISISLVNSMKLQKQS*SHTCRG
Trigger: GCCTCTGCAGGTGTGCGAGCAGGATTGCTTCTGCAA...TTTCATGCTATTCACTAATGAGATTGAGATCATGTGTGAGATCAGCTTTCTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556242.5
CDS-3UTR GCA 90 bp TTTGGGGTAAATAATTCACAGTCAAGAGCTCTGAGCACTTGGATTCAAAAAGAGGGTGGAGGCTTTTGTTaGAGAAGCAATCCTGCTCGC +
Preference number: 4 (lower is better)
Translates to: FGVNNSQSRALSTWIQKEGGGFC*RSNPAR
Trigger: GCGAGCAGGATTGCTTCTGCAACAAAAGCCTCCACC...CTCTTTTTGAATCCAAGTGCTCAGAGCTCTTGACTGTGAATTATTTACCCCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000334696.11
CDS-3UTR GCA 90 bp TACATAGGGAGTAATCTCTTAAAAGCTAGTGTCATCCTTGCATTACCACAACCAGGTGGAGGCTTTTGTTaGAGAAGCAATCCTGCTCGC +
Preference number: 4 (lower is better)
Translates to: YIGSNLLKASVILALPQPGGGFC*RSNPAR
Trigger: GCGAGCAGGATTGCTTCTGCAACAAAAGCCTCCACC...TGGTTGTGGTAATGCAAGGATGACACTAGCTTTTAAGAGATTACTCCCTATGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556242.5
CDS-3UTR CCA 90 bp GAAAACCAGGTCTCATTAATGCTAGTTATTACTTTATCACAGCACCAGATTTCCGTCTGCTGGTTCCTGTaGGAGACAGCGCTGCAAACA +
Preference number: 4 (lower is better)
Translates to: ENQVSLMLVITLSQHQISVCWFL*ETALQT
Trigger: TGTTTGCAGCGCTGTCTCCCACAGGAACCAGCAGAC...GGAAATCTGGTGCTGTGATAAAGTAATAACTAGCATTAATGAGACCTGGTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334696.11
CDS-3UTR CCA 90 bp TTTGGGGTAAATAATTCACAGTCAAGAGCTCTGAGCACTTGGATTCAAAAAGAGTCAAACCAAGTCTGCTaGTTCCTGTGGGAGACAGCG +
Preference number: 4 (lower is better)
Translates to: FGVNNSQSRALSTWIQKESNQVC*FLWETA
Trigger: CGCTGTCTCCCACAGGAACCAGCAGACTTGGTTTGA...CTCTTTTTGAATCCAAGTGCTCAGAGCTCTTGACTGTGAATTATTTACCCCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334696.11
CDS-3UTR CCA 90 bp AAAGAGAGCATGAGGGACATTAAATATGGTTCTCCCTGGAAATGTTGGTCCACTCTCCTGCAAAGAAGCTaGAGGTTAACAACCAAGGCA +
Preference number: 4 (lower is better)
Translates to: KESMRDIKYGSPWKCWSTLLQRS*RLTTKA
Trigger: TGCCTTGGTTGTTAACCTCCAGCTTCTTTGCAGGAG...AGTGGACCAACATTTCCAGGGAGAACCATATTTAATGTCCCTCATGCTCTCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334696.11
CDS-3UTR CCA 90 bp TTTGGGAAGCGGGTGGATCAATTGAGATCAGGAGTTGGAAACCAGCCTGGCCAAATTGGATTATTTCTTTaGGCTGTTTCCAACTCAAGA +
Preference number: 4 (lower is better)
Translates to: FGKRVDQLRSGVGNQPGQIGLFL*AVSNSR
Trigger: TCTTGAGTTGGAAACAGCCCAAAGAAATAATCCAAT...TTGGCCAGGCTGGTTTCCAACTCCTGATCTCAATTGATCCACCCGCTTCCCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334696.11
CDS-3UTR CCA 90 bp GAAAACCAGGTCTCATTAATGCTAGTTATTACTTTATCACAGCACCAGATTTCCAAGCTGTGTGACTCCTaGCGGAGACTGCAGGGACAA +
Preference number: 4 (lower is better)
Translates to: ENQVSLMLVITLSQHQISKLCDS*RRLQGQ
Trigger: TTGTCCCTGCAGTCTCCGCCAGGAGTCACACAGCTT...GGAAATCTGGTGCTGTGATAAAGTAATAACTAGCATTAATGAGACCTGGTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334696.11
CDS-3UTR CCA 90 bp AAAGAGAGCATGAGGGACATTAAATATGGTTCTCCCTGGAAATGTTGGTCCACTTTTGTTCATGTTTGGTaGCAGACTGGTGGCCAACTG +
Preference number: 4 (lower is better)
Translates to: KESMRDIKYGSPWKCWSTFVHVW*QTGGQL
Trigger: CAGTTGGCCACCAGTCTGCCACCAAACATGAACAAA...AGTGGACCAACATTTCCAGGGAGAACCATATTTAATGTCCCTCATGCTCTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334696.11
CDS-3UTR CCA 90 bp CCTTTTTGCATGGTAGCCATTCCTAACCCTACATCAGAACTATTCAGCTCCAGTATCCAGAATGTGAGCTaGAACTATGACCAGTCTGCT +
Preference number: 4 (lower is better)
Translates to: PFCMVAIPNPTSELFSSSIQNVS*NYDQSA
Trigger: AGCAGACTGGTCATAGTTCCAGCTCACATTCTGGAT...ACTGGAGCTGAATAGTTCTGATGTAGGGTTAGGAATGGCTACCATGCAAAAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557325.5
CDS-3UTR TCA 90 bp ATCCTAGTTGTGAGGAATGTCTTGCAGGAGTACTGGAAAGAAGGACTAGAGCAATCCACATTTCTTTGTTaGCCAGGAACAAGGAAAACG +
Preference number: 4 (lower is better)
Translates to: ILVVRNVLQEYWKEGLEQSTFLC*PGTRKT
Trigger: CGTTTTCCTTGTTCCTGGTCAACAAAGAAATGTGGA...TTGCTCTAGTCCTTCTTTCCAGTACTCCTGCAAGACATTCCTCACAACTAGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556242.5
CDS-3UTR TCA 90 bp TTAATTTTATCCAGGAGATTAGCTGAGGAGAGAAAGCTGATCTCACACATGATCAGGATACCACCAGCATaGAAAAGACTGTGCCCCAAG +
Preference number: 4 (lower is better)
Translates to: LILSRRLAEERKLISHMIRIPPA*KRLCPK
Trigger: CTTGGGGCACAGTCTTTTTCATGCTGGTGGTATCCT...GATCATGTGTGAGATCAGCTTTCTCTCCTCAGCTAATCTCCTGGATAAAATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000556242.5
CDS-3UTR TCA 90 bp GAAAACCAGGTCTCATTAATGCTAGTTATTACTTTATCACAGCACCAGATTTCCCCAGCTGTGTACTCTTaGGTGGTTAGGCAGCAGTTC +
Preference number: 4 (lower is better)
Translates to: ENQVSLMLVITLSQHQISPAVYS*VVRQQF
Trigger: GAACTGCTGCCTAACCACTCAAGAGTACACAGCTGG...GGAAATCTGGTGCTGTGATAAAGTAATAACTAGCATTAATGAGACCTGGTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334696.11
CDS-3UTR TCA 90 bp ATAATAGATCCTGGAATAGCACAGACACTGACCTCTGACCACAGACCAAAAGTTGGATCATACAGATTCTaGCATGGTCCCATTTTGCGT +
Preference number: 4 (lower is better)
Translates to: IIDPGIAQTLTSDHRPKVGSYRF*HGPILR
Trigger: ACGCAAAATGGGACCATGTCAGAATCTGTATGATCC...AACTTTTGGTCTGTGGTCAGAGGTCAGTGTCTGTGCTATTCCAGGATCTATTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334696.11
CDS-3UTR TCA 90 bp ACTCAATGGAGTAATGTTAAAAATAAGGTTTCCCATGGACTGTGTGAGGGCCAGCACAGTCAAGAGCTCTaGGCACTTGGATTCAAAAAG +
Preference number: 4 (lower is better)
Translates to: TQWSNVKNKVSHGLCEGQHSQEL*ALGFKK
Trigger: CTTTTTGAATCCAAGTGCTCAGAGCTCTTGACTGTG...CTGGCCCTCACACAGTCCATGGGAAACCTTATTTTTAACATTACTCCATTGAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000334696.11
CDS-3UTR GCA 90 bp GAAAACCAGGTCTCATTAATGCTAGTTATTACTTTATCACAGCACCAGATTTCCCCCTCAAACCAAGTCTaGTGGTTCCTGTGGGAGACA +
Preference number: 4 (lower is better)
Translates to: ENQVSLMLVITLSQHQISPSNQV*WFLWET
Trigger: TGTCTCCCACAGGAACCAGCAGACTTGGTTTGAGGG...GGAAATCTGGTGCTGTGATAAAGTAATAACTAGCATTAATGAGACCTGGTTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334696.11
CDS-3UTR GCA 90 bp AAAACAGAAGAGAGAGCTGGTTACCAAAAGTTAGGCTGCTTCAGATGCTGGGCTCACCATGCCTTCAACTaGCATGTTTATACATCATAC +
Preference number: 4 (lower is better)
Translates to: KTEERAGYQKLGCFRCWAHHAFN*HVYTSY
Trigger: GTATGATGTATAAACATGGCAGTTGAAGGCATGGTG...AGCCCAGCATCTGAAGCAGCCTAACTTTTGGTAACCAGCTCTCTCTTCTGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556242.5
CDS-3UTR GCA 90 bp ATCCTAGTTGTGAGGAATGTCTTGCAGGAGTACTGGAAAGAAGGACTAGAGCAAATTCACTGCTCACCATaGCTTCAACTGCCATGTTTA +
Preference number: 4 (lower is better)
Translates to: ILVVRNVLQEYWKEGLEQIHCSP*LQLPCL
Trigger: TAAACATGGCAGTTGAAGGCATGGTGAGCAGTGAAT...TTGCTCTAGTCCTTCTTTCCAGTACTCCTGCAAGACATTCCTCACAACTAGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556242.5
CDS-3UTR CCA 90 bp ACTCAATGGAGTAATGTTAAAAATAAGGTTTCCCATGGACTGTGTGAGGGCCAGAATGCGATTTTTCTTTaGTTTCCAGGGACCTGTCCC +
Preference number: 4 (lower is better)
Translates to: TQWSNVKNKVSHGLCEGQNAIFL*FPGTCP
Trigger: GGGACAGGTCCCTGGAAACCAAAGAAAAATCGCATT...CTGGCCCTCACACAGTCCATGGGAAACCTTATTTTTAACATTACTCCATTGAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000334696.11
CDS-3UTR CCA 90 bp GGTTGTAGGTTTGCTTACTCTAAAGAACATCTTGCCCAGAAGTCTGATTTGAGATCTCCCTGGAAATGTTaGTCCACTGTACTGATGTGG +
Preference number: 4 (lower is better)
Translates to: GCRFAYSKEHLAQKSDLRSPWKC*STVLMW
Trigger: CCACATCAGTACAGTGGACCAACATTTCCAGGGAGA...TCTCAAATCAGACTTCTGGGCAAGATGTTCTTTAGAGTAAGCAAACCTACAACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334696.11
CDS-3UTR CCA 90 bp ACTCAATGGAGTAATGTTAAAAATAAGGTTTCCCATGGACTGTGTGAGGGCCAGAGAATGCATCTTCCCTaGAGTTCAGAGGTATTTGGG +
Preference number: 4 (lower is better)
Translates to: TQWSNVKNKVSHGLCEGQRMHLP*SSEVFG
Trigger: CCCAAATACCTCTGAACTCCAGGGAAGATGCATTCT...CTGGCCCTCACACAGTCCATGGGAAACCTTATTTTTAACATTACTCCATTGAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334696.11
CDS-3UTR CCA 90 bp TGTGGGCTGAGAGAGCCAACCAAATCCAAGTGGGGTTTTGTCAGGAACGGTATTAAATTGCTCCTAAGATaGACAAATTGGTTACTTCTC +
Preference number: 4 (lower is better)
Translates to: CGLREPTKSKWGFVRNGIKLLLR*TNWLLL
Trigger: GAGAAGTAACCAATTTGTCCATCTTAGGAGCAATTT...AATACCGTTCCTGACAAAACCCCACTTGGATTTGGTTGGCTCTCTCAGCCCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334696.11
CDS-3UTR CCA 90 bp AAAGAGAGCATGAGGGACATTAAATATGGTTCTCCCTGGAAATGTTGGTCCACTGAATTTGTTCATGTTTaGTGGCAGACTGGTGGCCAA +
Preference number: 4 (lower is better)
Translates to: KESMRDIKYGSPWKCWSTEFVHV*WQTGGQ
Trigger: TTGGCCACCAGTCTGCCACCAAACATGAACAAATTC...AGTGGACCAACATTTCCAGGGAGAACCATATTTAATGTCCCTCATGCTCTCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334696.11
CDS-3UTR CCA 90 bp ATAATAGATCCTGGAATAGCACAGACACTGACCTCTGACCACAGACCAAAAGTTTTTATGGTTCCTCTCTaGGACACCACTGTCGGTTTA +
Preference number: 4 (lower is better)
Translates to: IIDPGIAQTLTSDHRPKVFMVPL*DTTVGL
Trigger: TAAACCGACAGTGGTGTCCCAGAGAGGAACCATAAA...AACTTTTGGTCTGTGGTCAGAGGTCAGTGTCTGTGCTATTCCAGGATCTATTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334696.11
CDS-3UTR CCA 90 bp CCTTTTTGCATGGTAGCCATTCCTAACCCTACATCAGAACTATTCAGCTCCAGTCTTAGCCGTTGGTATTaGTGTTCTTTTGACACAGCT +
Preference number: 4 (lower is better)
Translates to: PFCMVAIPNPTSELFSSSLSRWY*CSFDTA
Trigger: AGCTGTGTCAAAAGAACACCAATACCAACGGCTAAG...ACTGGAGCTGAATAGTTCTGATGTAGGGTTAGGAATGGCTACCATGCAAAAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557325.5
CDS-3UTR CCA 90 bp TTAATTTTATCCAGGAGATTAGCTGAGGAGAGAAAGCTGATCTCACACATGATCCTACCATTTCTCTGGTaGACACCTAACTCCTCCACC +
Preference number: 4 (lower is better)
Translates to: LILSRRLAEERKLISHMILPFLW*TPNSST
Trigger: GGTGGAGGAGTTAGGTGTCCACCAGAGAAATGGTAG...GATCATGTGTGAGATCAGCTTTCTCTCCTCAGCTAATCTCCTGGATAAAATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556242.5
3UTR CAA 72 bp AAGTTATCCCAAATGATCCTAGTTGTGAGGAATGTCTaGCAGGAGTACTGGAAAGAAGGACTAGAGCAACCT +
Preference number: 4 (lower is better)
Translates to: KLSQMILVVRNV*QEYWKEGLEQP
Trigger: AGGTTGCTCTAGTCCTTCTTTCCAGTACTCCTGCAAGACATTCCTCACAACTAGGATCATTTGGGATAACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556242.5
CDS-3UTR TCA 90 bp ACTCAATGGAGTAATGTTAAAAATAAGGTTTCCCATGGACTGTGTGAGGGCCAGTCCACATTTCTTTGTTaGCCAGGAACAAGGAAAACG +
Preference number: 4 (lower is better)
Translates to: TQWSNVKNKVSHGLCEGQSTFLC*PGTRKT
Trigger: CGTTTTCCTTGTTCCTGGTCAACAAAGAAATGTGGA...CTGGCCCTCACACAGTCCATGGGAAACCTTATTTTTAACATTACTCCATTGAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334696.11
CDS-3UTR TCA 90 bp GAAAACAAGTTTAGAATCATAGAAAACACTGTTAACACATTAGCCTGGGAGGTGGCACCCTACTTTTGTTaGCAAAGATGGGAAGGGGTC +
Preference number: 4 (lower is better)
Translates to: ENKFRIIENTVNTLAWEVAPYFC*QRWEGV
Trigger: GACCCCTTCCCATCTTTGTCAACAAAAGTAGGGTGC...CACCTCCCAGGCTAATGTGTTAACAGTGTTTTCTATGATTCTAAACTTGTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000334696.11
CDS-3UTR GCA 90 bp GGTTGTAGGTTTGCTTACTCTAAAGAACATCTTGCCCAGAAGTCTGATTTGAGAAAAGGTGTTGGCAAATaGAGGTCTCCAAGGAAGTAC +
Preference number: 4 (lower is better)
Translates to: GCRFAYSKEHLAQKSDLRKGVGK*RSPRKY
Trigger: GTACTTCCTTGGAGACCTGCATTTGCCAACACCTTT...TCTCAAATCAGACTTCTGGGCAAGATGTTCTTTAGAGTAAGCAAACCTACAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334696.11
CDS-3UTR GCA 90 bp ATAATAGATCCTGGAATAGCACAGACACTGACCTCTGACCACAGACCAAAAGTTCTATTCTTACAGGGGTaGTTTTCAGGCAAATGCAGA +
Preference number: 4 (lower is better)
Translates to: IIDPGIAQTLTSDHRPKVLFLQG*FSGKCR
Trigger: TCTGCATTTGCCTGAAAAGCACCCCTGTAAGAATAG...AACTTTTGGTCTGTGGTCAGAGGTCAGTGTCTGTGCTATTCCAGGATCTATTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000334696.11
CDS-3UTR GCA 90 bp TACATAGGGAGTAATCTCTTAAAAGCTAGTGTCATCCTTGCATTACCACAACCACTGAGGGTCCATTTCTaGTACCATTTCTCTGGTGGA +
Preference number: 4 (lower is better)
Translates to: YIGSNLLKASVILALPQPLRVHF*YHFSGG
Trigger: TCCACCAGAGAAATGGTAGCAGAAATGGACCCTCAG...TGGTTGTGGTAATGCAAGGATGACACTAGCTTTTAAGAGATTACTCCCTATGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556242.5
CDS-3UTR CCA 90 bp GATCCTAGTTGTGAGGAATGTCTTGCAGGAGTACTGGAAAGAAGGACTAGAGCATTTCAACCTTACATCTaGATACAAGTCCTACCTAAC +
Preference number: 4 (lower is better)
Translates to: DPSCEECLAGVLERRTRAFQPYI*IQVLPN
Trigger: GTTAGGTAGGACTTGTATCCAGATGTAAGGTTGAAA...TGCTCTAGTCCTTCTTTCCAGTACTCCTGCAAGACATTCCTCACAACTAGGATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556242.5
CDS-3UTR CCA 90 bp GAGAGAAAGCTGATCTCACACATGATCTCAATCTCATTAGTGAATAGCATGAAATTCCCAAGATGTGGCTaGGTGGAGGCTTTTGTTGCA +
Preference number: 4 (lower is better)
Translates to: ERKLISHMISISLVNSMKFPRCG*VEAFVA
Trigger: TGCAACAAAAGCCTCCACCCAGCCACATCTTGGGAA...TTTCATGCTATTCACTAATGAGATTGAGATCATGTGTGAGATCAGCTTTCTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556242.5
3UTR CAA 72 bp TTTGAAGAGGTCTCGTCACAAGACCAGAGATGCCTCTaGAAGAGATTTTTAGGTTGTAGGTTTGCTTACTCT +
Preference number: 4 (lower is better)
Translates to: FEEVSSQDQRCL*KRFLGCRFAYS
Trigger: AGAGTAAGCAAACCTACAACCTAAAAATCTCTTCAAGAGGCATCTCTGGTCTTGTGACGAGACCTCTTCAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334696.11
CDS-3UTR TCA 90 bp TTTGGGGTAAATAATTCACAGTCAAGAGCTCTGAGCACTTGGATTCAAAAAGAGGCACCCTGCTTAGGTTaGTCTACAAAAGCAGAAAGT +
Preference number: 4 (lower is better)
Translates to: FGVNNSQSRALSTWIQKEAPCLG*STKAES
Trigger: ACTTTCTGCTTTTGTAGATCAACCTAAGCAGGGTGC...CTCTTTTTGAATCCAAGTGCTCAGAGCTCTTGACTGTGAATTATTTACCCCAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000334696.11
CDS-3UTR TCA 90 bp GAAAACAAGTTTAGAATCATAGAAAACACTGTTAACACATTAGCCTGGGAGGTGACATTTAGTGTTCTGTaGCTGGTCTGGCACCCTACT +
Preference number: 4 (lower is better)
Translates to: ENKFRIIENTVNTLAWEVTFSVL*LVWHPT
Trigger: AGTAGGGTGCCAGACCAGTCACAGAACACTAAATGT...CACCTCCCAGGCTAATGTGTTAACAGTGTTTTCTATGATTCTAAACTTGTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334696.11
CDS-3UTR TCA 90 bp TTTGGGGTAAATAATTCACAGTCAAGAGCTCTGAGCACTTGGATTCAAAAAGAGAAATGGCCCCCACAGTaGTTAAAGACCAGAGACTTA +
Preference number: 4 (lower is better)
Translates to: FGVNNSQSRALSTWIQKEKWPPQ*LKTRDL
Trigger: TAAGTCTCTGGTCTTTAATCACTGTGGGGGCCATTT...CTCTTTTTGAATCCAAGTGCTCAGAGCTCTTGACTGTGAATTATTTACCCCAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000334696.11
CDS-3UTR CCA 90 bp CATCTTCTACCACCAAAGATTTTTGTCATCATGGGTTGTTGCCTAATTTCTCAACTGTGCCCCAAGAAGTaGCCATTCTTTTCCCAAGAT +
Preference number: 4 (lower is better)
Translates to: HLLPPKIFVIMGCCLISQLCPKK*PFFSQD
Trigger: ATCTTGGGAAAAGAATGGCCACTTCTTGGGGCACAG...TTGAGAAATTAGGCAACAACCCATGATGACAAAAATCTTTGGTGGTAGAAGATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000556242.5
CDS-3UTR CCA 90 bp GAAAACAAGTTTAGAATCATAGAAAACACTGTTAACACATTAGCCTGGGAGGTGTGGTTGCCACCATACTaGTATTTCACACCCCCAAAG +
Preference number: 4 (lower is better)
Translates to: ENKFRIIENTVNTLAWEVWLPPY*YFTPPK
Trigger: CTTTGGGGGTGTGAAATACCAGTATGGTGGCAACCA...CACCTCCCAGGCTAATGTGTTAACAGTGTTTTCTATGATTCTAAACTTGTTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000334696.11
CDS-3UTR CCA 90 bp TTTGGGGTAAATAATTCACAGTCAAGAGCTCTGAGCACTTGGATTCAAAAAGAGCCCTTAAAAAGGTGTTaGCAAATGCAGGTCTCCAAG +
Preference number: 4 (lower is better)
Translates to: FGVNNSQSRALSTWIQKEPLKRC*QMQVSK
Trigger: CTTGGAGACCTGCATTTGCCAACACCTTTTTAAGGG...CTCTTTTTGAATCCAAGTGCTCAGAGCTCTTGACTGTGAATTATTTACCCCAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000334696.11
CDS-3UTR CCA 90 bp GAAAACAAGTTTAGAATCATAGAAAACACTGTTAACACATTAGCCTGGGAGGTGATTGAGATCAGGAGTTaGAAACCAGCCTGGCCAACA +
Preference number: 4 (lower is better)
Translates to: ENKFRIIENTVNTLAWEVIEIRS*KPAWPT
Trigger: TGTTGGCCAGGCTGGTTTCCAACTCCTGATCTCAAT...CACCTCCCAGGCTAATGTGTTAACAGTGTTTTCTATGATTCTAAACTTGTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334696.11
CDS-3UTR CCA 90 bp ATAATAGATCCTGGAATAGCACAGACACTGACCTCTGACCACAGACCAAAAGTTTTTGAGGAAGGCAGTTaGTATAAAGGTGACCTTAGT +
Preference number: 4 (lower is better)
Translates to: IIDPGIAQTLTSDHRPKVFEEGS*YKGDLS
Trigger: ACTAAGGTCACCTTTATACCAACTGCCTTCCTCAAA...AACTTTTGGTCTGTGGTCAGAGGTCAGTGTCTGTGCTATTCCAGGATCTATTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334696.11
CDS-3UTR CCA 90 bp TTTGGGGTAAATAATTCACAGTCAAGAGCTCTGAGCACTTGGATTCAAAAAGAGGAGTTCAGAGGTATTTaGGATGACCAAAGGAGTCTG +
Preference number: 4 (lower is better)
Translates to: FGVNNSQSRALSTWIQKEEFRGI*DDQRSL
Trigger: CAGACTCCTTTGGTCATCCCAAATACCTCTGAACTC...CTCTTTTTGAATCCAAGTGCTCAGAGCTCTTGACTGTGAATTATTTACCCCAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334696.11
CDS-3UTR CCA 90 bp ATAATAGATCCTGGAATAGCACAGACACTGACCTCTGACCACAGACCAAAAGTTCTAAGATGGACAAATTaGTTACTTCTCCAGAAGGTC +
Preference number: 4 (lower is better)
Translates to: IIDPGIAQTLTSDHRPKVLRWTN*LLLQKV
Trigger: GACCTTCTGGAGAAGTAACCAATTTGTCCATCTTAG...AACTTTTGGTCTGTGGTCAGAGGTCAGTGTCTGTGCTATTCCAGGATCTATTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334696.11
CDS-3UTR TCA 90 bp GAAAACCAGGTCTCATTAATGCTAGTTATTACTTTATCACAGCACCAGATTTCCAAGGACTGCCTGAGGTaGAGTTTTCCAAGTTATCAC +
Preference number: 4 (lower is better)
Translates to: ENQVSLMLVITLSQHQISKDCLR*SFPSYH
Trigger: GTGATAACTTGGAAAACTTCACCTCAGGCAGTCCTT...GGAAATCTGGTGCTGTGATAAAGTAATAACTAGCATTAATGAGACCTGGTTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334696.11
CDS-3UTR TCA 90 bp TTTGGGGTAAATAATTCACAGTCAAGAGCTCTGAGCACTTGGATTCAAAAAGAGTTTACTGTGGGTTTTTaGAGAGGTCTCGTCACAAGA +
Preference number: 4 (lower is better)
Translates to: FGVNNSQSRALSTWIQKEFTVGF*RGLVTR
Trigger: TCTTGTGACGAGACCTCTTCAAAAACCCACAGTAAA...CTCTTTTTGAATCCAAGTGCTCAGAGCTCTTGACTGTGAATTATTTACCCCAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000334696.11
CDS-3UTR GCA 90 bp ACTCAATGGAGTAATGTTAAAAATAAGGTTTCCCATGGACTGTGTGAGGGCCAGAAGGATACAGAAATTTaGCTAGTAACTTGCACACAG +
Preference number: 4 (lower is better)
Translates to: TQWSNVKNKVSHGLCEGQKDTEI*LVTCTQ
Trigger: CTGTGTGCAAGTTACTAGGCAAATTTCTGTATCCTT...CTGGCCCTCACACAGTCCATGGGAAACCTTATTTTTAACATTACTCCATTGAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334696.11
CDS-3UTR GCA 90 bp TTTGGGGTAAATAATTCACAGTCAAGAGCTCTGAGCACTTGGATTCAAAAAGAGATTAAAGATGGCAGCTaGTGTGAAAAGCTGTGTGAC +
Preference number: 4 (lower is better)
Translates to: FGVNNSQSRALSTWIQKEIKDGS*CEKLCD
Trigger: GTCACACAGCTTTTCACAGCAGCTGCCATCTTTAAT...CTCTTTTTGAATCCAAGTGCTCAGAGCTCTTGACTGTGAATTATTTACCCCAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000334696.11
CDS-3UTR CCA 90 bp AAAGAGAGCATGAGGGACATTAAATATGGTTCTCCCTGGAAATGTTGGTCCACTTTTCAACCTTACATCTaGATACAAGTCCTACCTAAC +
Preference number: 4 (lower is better)
Translates to: KESMRDIKYGSPWKCWSTFQPYI*IQVLPN
Trigger: GTTAGGTAGGACTTGTATCCAGATGTAAGGTTGAAA...AGTGGACCAACATTTCCAGGGAGAACCATATTTAATGTCCCTCATGCTCTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334696.11
CDS-3UTR CCA 90 bp GAAAACCAGGTCTCATTAATGCTAGTTATTACTTTATCACAGCACCAGATTTCCCTGTGTACTCTTGAGTaGTTAGGCAGCAGTTCACAT +
Preference number: 4 (lower is better)
Translates to: ENQVSLMLVITLSQHQISLCTLE*LGSSSH
Trigger: ATGTGAACTGCTGCCTAACCACTCAAGAGTACACAG...GGAAATCTGGTGCTGTGATAAAGTAATAACTAGCATTAATGAGACCTGGTTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334696.11
CDS-3UTR CCA 90 bp GGTTGTAGGTTTGCTTACTCTAAAGAACATCTTGCCCAGAAGTCTGATTTGAGAATACAGATTCTGACATaGTCCCATTTTGCGTTGTTG +
Preference number: 4 (lower is better)
Translates to: GCRFAYSKEHLAQKSDLRIQILT*SHFALL
Trigger: CAACAACGCAAAATGGGACCATGTCAGAATCTGTAT...TCTCAAATCAGACTTCTGGGCAAGATGTTCTTTAGAGTAAGCAAACCTACAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334696.11
CDS-3UTR CCA 90 bp TTAATTTTATCCAGGAGATTAGCTGAGGAGAGAAAGCTGATCTCACACATGATCAACAGAAGAGAGAGCTaGTTACCAAAAGTTAGGCTG +
Preference number: 4 (lower is better)
Translates to: LILSRRLAEERKLISHMINRRES*LPKVRL
Trigger: CAGCCTAACTTTTGGTAACCAGCTCTCTCTTCTGTT...GATCATGTGTGAGATCAGCTTTCTCTCCTCAGCTAATCTCCTGGATAAAATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556242.5
CDS-3UTR CCA 90 bp GAGAGAAAGCTGATCTCACACATGATCTCAATCTCATTAGTGAATAGCATGAAACAAGGCACTCTGAAATaGAATTCACTGCTCACCATG +
Preference number: 4 (lower is better)
Translates to: ERKLISHMISISLVNSMKQGTLK*NSLLTM
Trigger: CATGGTGAGCAGTGAATTCCATTTCAGAGTGCCTTG...TTTCATGCTATTCACTAATGAGATTGAGATCATGTGTGAGATCAGCTTTCTCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556242.5
CDS-3UTR TCA 90 bp GAAAACAAGTTTAGAATCATAGAAAACACTGTTAACACATTAGCCTGGGAGGTGTGTTCACTTTCTTTGTaGGCTGTAAGACTGTGCTGT +
Preference number: 4 (lower is better)
Translates to: ENKFRIIENTVNTLAWEVCSLSL*AVRLCC
Trigger: ACAGCACAGTCTTACAGCTCACAAAGAAAGTGAACA...CACCTCCCAGGCTAATGTGTTAACAGTGTTTTCTATGATTCTAAACTTGTTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334696.11
CDS-3UTR GCA 90 bp GGTTGTAGGTTTGCTTACTCTAAAGAACATCTTGCCCAGAAGTCTGATTTGAGAGACATGGTCCCATTTTaGGTTGTTGAATTATACATG +
Preference number: 4 (lower is better)
Translates to: GCRFAYSKEHLAQKSDLRDMVPF*VVELYM
Trigger: CATGTATAATTCAACAACGCAAAATGGGACCATGTC...TCTCAAATCAGACTTCTGGGCAAGATGTTCTTTAGAGTAAGCAAACCTACAACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334696.11
CDS-3UTR GCA 90 bp GAAAACAAGTTTAGAATCATAGAAAACACTGTTAACACATTAGCCTGGGAGGTGATGACCAAAGGAGTCTaGTGGACAGTATGTGTGTTT +
Preference number: 4 (lower is better)
Translates to: ENKFRIIENTVNTLAWEVMTKGV*WTVCVF
Trigger: AAACACACATACTGTCCAGCAGACTCCTTTGGTCAT...CACCTCCCAGGCTAATGTGTTAACAGTGTTTTCTATGATTCTAAACTTGTTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334696.11
CDS-3UTR CCA 90 bp GAAAACAAGTTTAGAATCATAGAAAACACTGTTAACACATTAGCCTGGGAGGTGAATTGGAAGCTGTCCTaGCATTTTCTGCACAAAGGT +
Preference number: 4 (lower is better)
Translates to: ENKFRIIENTVNTLAWEVNWKLS*HFLHKG
Trigger: ACCTTTGTGCAGAAAATGCCAGGACAGCTTCCAATT...CACCTCCCAGGCTAATGTGTTAACAGTGTTTTCTATGATTCTAAACTTGTTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000334696.11
CDS-3UTR CCA 90 bp ATAATAGATCCTGGAATAGCACAGACACTGACCTCTGACCACAGACCAAAAGTTAATTTAAATATTCAGTaGAATGAGGCACTCAAAGGG +
Preference number: 4 (lower is better)
Translates to: IIDPGIAQTLTSDHRPKVNLNIQ*NEALKG
Trigger: CCCTTTGAGTGCCTCATTCCACTGAATATTTAAATT...AACTTTTGGTCTGTGGTCAGAGGTCAGTGTCTGTGCTATTCCAGGATCTATTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334696.11
CDS-3UTR CCA 90 bp TACATAGGGAGTAATCTCTTAAAAGCTAGTGTCATCCTTGCATTACCACAACCATTAACAGCAGTGGTGTaGTCAAGTTATCAAGGCATT +
Preference number: 4 (lower is better)
Translates to: YIGSNLLKASVILALPQPLTAVV*SSYQGI
Trigger: AATGCCTTGATAACTTGACCACACCACTGCTGTTAA...TGGTTGTGGTAATGCAAGGATGACACTAGCTTTTAAGAGATTACTCCCTATGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556242.5
CDS-3UTR TCA 90 bp GAAAACAAGTTTAGAATCATAGAAAACACTGTTAACACATTAGCCTGGGAGGTGAAATATTCAGTGGAATaGGGCACTCAAAGGGTTGAA +
Preference number: 4 (lower is better)
Translates to: ENKFRIIENTVNTLAWEVKYSVE*GTQRVE
Trigger: TTCAACCCTTTGAGTGCCTCATTCCACTGAATATTT...CACCTCCCAGGCTAATGTGTTAACAGTGTTTTCTATGATTCTAAACTTGTTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334696.11
CDS-3UTR TCA 90 bp TTTGGGGTAAATAATTCACAGTCAAGAGCTCTGAGCACTTGGATTCAAAAAGAGCCCATTTTGCGTTGTTaGATTATACATGGAAAGCAA +
Preference number: 4 (lower is better)
Translates to: FGVNNSQSRALSTWIQKEPILRC*IIHGKQ
Trigger: TTGCTTTCCATGTATAATTCAACAACGCAAAATGGG...CTCTTTTTGAATCCAAGTGCTCAGAGCTCTTGACTGTGAATTATTTACCCCAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000334696.11
CDS-3UTR TCA 90 bp CATCTTCTACCACCAAAGATTTTTGTCATCATGGGTTGTTGCCTAATTTCTCAAGTAGATGCTCAAATGTaGAATATAGTCGCCACAAAC +
Preference number: 4 (lower is better)
Translates to: HLLPPKIFVIMGCCLISQVDAQM*NIVATN
Trigger: GTTTGTGGCGACTATATTTCACATTTGAGCATCTAC...TTGAGAAATTAGGCAACAACCCATGATGACAAAAATCTTTGGTGGTAGAAGATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556242.5
CDS-3UTR GCA 90 bp TTTGGGGTAAATAATTCACAGTCAAGAGCTCTGAGCACTTGGATTCAAAAAGAGTCACAAGACCAGAGATaGCTCTTGAAGAGATTTTTA +
Preference number: 4 (lower is better)
Translates to: FGVNNSQSRALSTWIQKESQDQR*LLKRFL
Trigger: TAAAAATCTCTTCAAGAGGCATCTCTGGTCTTGTGA...CTCTTTTTGAATCCAAGTGCTCAGAGCTCTTGACTGTGAATTATTTACCCCAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000334696.11
CDS-3UTR CCA 90 bp TTTGGGGTAAATAATTCACAGTCAAGAGCTCTGAGCACTTGGATTCAAAAAGAGGATATTGATGGGTCTTaGGATTGCAATAAGTCAGTT +
Preference number: 4 (lower is better)
Translates to: FGVNNSQSRALSTWIQKEDIDGS*DCNKSV
Trigger: AACTGACTTATTGCAATCCCAAGACCCATCAATATC...CTCTTTTTGAATCCAAGTGCTCAGAGCTCTTGACTGTGAATTATTTACCCCAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334696.11
3UTR CAA 72 bp AGGATCATACAGATTCTGACATGGTCCCATTTTGCGTaGTTGAATTATACATGGAAAGCAAAACCAGGTTTT +
Preference number: 4 (lower is better)
Translates to: RIIQILTWSHFA*LNYTWKAKPGF
Trigger: AAAACCTGGTTTTGCTTTCCATGTATAATTCAACAACGCAAAATGGGACCATGTCAGAATCTGTATGATCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334696.11
3UTR CAA 72 bp TCTTCTACCACCAAAGATTTTTGTCATCATGGGTTGTaGCCTAATTTCTCAAGTATAGATATGGTTCCATCC +
Preference number: 4 (lower is better)
Translates to: SSTTKDFCHHGL*PNFSSIDMVPS
Trigger: GGATGGAACCATATCTATACTTGAGAAATTAGGCAACAACCCATGATGACAAAAATCTTTGGTGGTAGAAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556242.5
CDS-3UTR GCA 90 bp GAAAACCAGGTCTCATTAATGCTAGTTATTACTTTATCACAGCACCAGATTTCCAGAGACTTATATCTCTaGATTTGTCAAGCTGGAACA +
Preference number: 4 (lower is better)
Translates to: ENQVSLMLVITLSQHQISRDLYL*ICQAGT
Trigger: TGTTCCAGCTTGACAAATGCAGAGATATAAGTCTCT...GGAAATCTGGTGCTGTGATAAAGTAATAACTAGCATTAATGAGACCTGGTTTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334696.11
CDS-3UTR CCA 90 bp TACATAGGGAGTAATCTCTTAAAAGCTAGTGTCATCCTTGCATTACCACAACCATATTTTATTTCAACATaGCCTCAGACACATAGGATG +
Preference number: 4 (lower is better)
Translates to: YIGSNLLKASVILALPQPYFIST*PQTHRM
Trigger: CATCCTATGTGTCTGAGGCCATGTTGAAATAAAATA...TGGTTGTGGTAATGCAAGGATGACACTAGCTTTTAAGAGATTACTCCCTATGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556242.5
CDS-3UTR CCA 90 bp GAAAACAAGTTTAGAATCATAGAAAACACTGTTAACACATTAGCCTGGGAGGTGTATCACACACTTCCCTaGCTTTTCTTTCAAAATCTT +
Preference number: 4 (lower is better)
Translates to: ENKFRIIENTVNTLAWEVYHTLP*LFFQNL
Trigger: AAGATTTTGAAAGAAAAGCCAGGGAAGTGTGTGATA...CACCTCCCAGGCTAATGTGTTAACAGTGTTTTCTATGATTCTAAACTTGTTTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000334696.11
3UTR CAA 72 bp TCATCTTCTACCACCAAAGATTTTTGTCATCATGGGTaGTTGCCTAATTTCTCAAGTATAGATATGGTTCCA +
Preference number: 4 (lower is better)
Translates to: SSSTTKDFCHHG*LPNFSSIDMVP
Trigger: TGGAACCATATCTATACTTGAGAAATTAGGCAACAACCCATGATGACAAAAATCTTTGGTGGTAGAAGATGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556242.5
3UTR CAA 72 bp TCCAACTCAAGATTCTGTTATTTCATTATAAGCATTTaGAGGAAGGCAGTTGGTATAAAGGTGACCTTAGTA +
Preference number: 4 (lower is better)
Translates to: SNSRFCYFIISI*RKAVGIKVTLV
Trigger: TACTAAGGTCACCTTTATACCAACTGCCTTCCTCAAAATGCTTATAATGAAATAACAGAATCTTGAGTTGGA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334696.11
3UTR CAA 72 bp GAGAAACAGTCTGCTTTTGAACCAAGTAAGGTATTCTaGGGAATAATTTTTAGAGCCATGAGAAATCTATTC +
Preference number: 4 (lower is better)
Translates to: EKQSAFEPSKVF*GIIFRAMRNLF
Trigger: GAATAGATTTCTCATGGCTCTAAAAATTATTCCCAAGAATACCTTACTTGGTTCAAAAGCAGACTGTTTCTC
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334696.11
CDS GCA 90 bp GAAGCGGAGCGGGGGCGAGGGCAAGGTAGCCGCGGCCACGCTGGCTaGGGCATGGAGACACGGGAGGAACGGGACCCGCGGGCGGCACGG +
Preference number: 5 (lower is better)
Translates to: EAERGRGQGSRGHAG*GMETREERDPRAAR
Trigger: CCGTGCCGCCCGCGGGTCCCGTTCCTCCCGTGTCTCCATGCCGCAGCCAGCGTGGCCGCGGCTACCTTGCCCTCGCCCCCGCTCCGCTTC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554664.5
CDS GCA 90 bp TCGGTGGCAGCACTCCCCTCCCCGCCCGGCTCCCTGGCGTGCCGCTaGTCTTCGGAGGCTGGCAGCCTCGCCCTCAACCACCGCCCTCGG +
Preference number: 5 (lower is better)
Translates to: SVAALPSPPGSLACR*SSEAGSLALNHRPR
Trigger: CCGAGGGCGGTGGTTGAGGGCGAGGCTGCCAGCCTCCGAAGAGCAGCGGCACGCCAGGGAGCCGGGCGGGGAGGGGAGTGCTGCCACCGA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554664.5
CDS GCA 90 bp CCGACCTCGGTGGCAGCACTCCCCTCCCCGCCCGGCTCCCTGGCGTaGCGCTGCTCTTCGGAGGCTGGCAGCCTCGCCCTCAACCACCGC +
Preference number: 5 (lower is better)
Translates to: PTSVAALPSPPGSLA*RCSSEAGSLALNHR
Trigger: GCGGTGGTTGAGGGCGAGGCTGCCAGCCTCCGAAGAGCAGCGGCACGCCAGGGAGCCGGGCGGGGAGGGGAGTGCTGCCACCGAGGTCGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554664.5
CDS CCA 90 bp AGCGGGGGCGAGGGCAAGGTAGCCGCGGCCACGCTGGCTGCGGCATaGAGACACGGGAGGAACGGGACCCGCGGGCGGCACGGGAAAGGG +
Preference number: 5 (lower is better)
Translates to: SGGEGKVAAATLAAA*RHGRNGTRGRHGKG
Trigger: CCCTTTCCCGTGCCGCCCGCGGGTCCCGTTCCTCCCGTGTCTCCATGCCGCAGCCAGCGTGGCCGCGGCTACCTTGCCCTCGCCCCCGCT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554664.5
CDS GCA 90 bp GGAGACACGGGAGGAACGGGACCCGCGGGCGGCACGGGAAAGGGCTaGGGCTCAGACCACTGCGGCGGGACGGGCGGATCAGCGGGGATC +
Preference number: 5 (lower is better)
Translates to: GDTGGTGPAGGTGKG*GSDHCGGTGGSAGI
Trigger: GATCCCCGCTGATCCGCCCGTCCCGCCGCAGTGGTCTGAGCCGCAGCCCTTTCCCGTGCCGCCCGCGGGTCCCGTTCCTCCCGTGTCTCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554664.5
CDS CCA 90 bp CCCCTCCCCGCCCGGCTCCCTGGCGTGCCGCTGCTCTTCGGAGGCTaGCAGCCTCGCCCTCAACCACCGCCCTCGGGAAAGTCCTCGACT +
Preference number: 5 (lower is better)
Translates to: PLPARLPGVPLLFGG*QPRPQPPPSGKSST
Trigger: AGTCGAGGACTTTCCCGAGGGCGGTGGTTGAGGGCGAGGCTGCCAGCCTCCGAAGAGCAGCGGCACGCCAGGGAGCCGGGCGGGGAGGGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554664.5
CDS TCA 90 bp GATCTAAGTCTCCTGAGGCAAGGGCGCCCCGACCGCAGCGACTCCTaGCACACCCAGGCCGCAGGACGAAGCGCTACCGCCTGGGGCTGC +
Preference number: 5 (lower is better)
Translates to: DLSLLRQGRPDRSDS*HTQAAGRSATAWGC
Trigger: GCAGCCCCAGGCGGTAGCGCTTCGTCCTGCGGCCTGGGTGTGTCAGGAGTCGCTGCGGTCGGGGCGCCCTTGCCTCAGGAGACTTAGATC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554664.5
CDS CCA 90 bp CCACAGAGTCCATCCGCTTGCAGGACAGGGTGTCAACATGGGCTTTaGGGATATCTCCAGCTTGGCCCATCACCTCAGTACGGCAGCCTG +
Preference number: 5 (lower is better)
Translates to: PQSPSACRTGCQHGL*GYLQLGPSPQYGSL
Trigger: CAGGCTGCCGTACTGAGGTGATGGGCCAAGCTGGAGATATCCCCAAAGCCCATGTTGACACCCTGTCCTGCAAGCGGATGGACTCTGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555829.5
CDS-3UTR CAA 90 bp GGGCCAGACCACAGGGAGATCTTCCAGGTCCAAGAGCACTGCAGGGCAGATGAGGCTGGGTGGAGGCTTTaGTTGCAGAAGCAATCCTGC +
Preference number: 5 (lower is better)
Translates to: GPDHREIFQVQEHCRADEAGWRL*LQKQSC
Trigger: GCAGGATTGCTTCTGCAACAAAAGCCTCCACCCAGC...CTCATCTGCCCTGCAGTGCTCTTGGACCTGGAAGATCTCCCTGTGGTCTGGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334696.11
CDS-3UTR CAA 90 bp TCGCCAGCTGCCCCCAAGCGTAGCCAGGGTGGATGCCAAAAGCCGAGTTCTGTTACAGAGTCCATCCGCTaGCAGGACAGGGTGTCAACA +
Preference number: 5 (lower is better)
Translates to: SPAAPKRSQGGCQKPSSVTESIR*QDRVST
Trigger: TGTTGACACCCTGTCCTGCAAGCGGATGGACTCTGT...AACAGAACTCGGCTTTTGGCATCCACCCTGGCTACGCTTGGGGGCAGCTGGCGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555829.5
CDS CCA 90 bp ATGCAGCCCACAGAGTCCATCCGCTTGCAGGACAGGGTGTCAACATaGGCTTTGGGGATATCTCCAGCTTGGCCCATCACCTCAGTACGG +
Preference number: 5 (lower is better)
Translates to: MQPTESIRLQDRVST*ALGISPAWPITSVR
Trigger: CCGTACTGAGGTGATGGGCCAAGCTGGAGATATCCCCAAAGCCCATGTTGACACCCTGTCCTGCAAGCGGATGGACTCTGTGGGCTGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555829.5
CDS CCA 90 bp CGTGGCCTCAATGGGAGATGCCCAGAGACTGCAACAGGTGAAAGGTaGCCCCCAAGGCCCAGCCCGTCTCTATGTTGTTCACTTTCTTTG +
Preference number: 5 (lower is better)
Translates to: RGLNGRCPETATGER*PPRPSPSLCCSLSL
Trigger: CAAAGAAAGTGAACAACATAGAGACGGGCTGGGCCTTGGGGGCCACCTTTCACCTGTTGCAGTCTCTGGGCATCTCCCATTGAGGCCACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334696.11
CDS-3UTR CAA 90 bp ATGGCCGACTCCAGCCCTTGGGTTCATATTACCCTAGGTGATGGCAGCACCTTCGGCCGACTCCAGCCCTaGGGTTCATATTACCCTAGG +
Preference number: 5 (lower is better)
Translates to: MADSSPWVHITLGDGSTFGRLQP*GSYYPR
Trigger: CCTAGGGTAATATGAACCCAAGGGCTGGAGTCGGCC...GAAGGTGCTGCCATCACCTAGGGTAATATGAACCCAAGGGCTGGAGTCGGCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557325.5
CDS-3UTR CAA 90 bp ACCACACGGACTTCATCGACACAGCTGGTGCCATGCTGCAGTATGCTGTCAGCCCTCGGGTGGCGCTCATaGGGTAAGACGATAACAGAG +
Preference number: 5 (lower is better)
Translates to: TTRTSSTQLVPCCSMLSALGWRS*GKTITE
Trigger: CTCTGTTATCGTCTTACCCAATGAGCGCCACCCGAG...GGCTGACAGCATACTGCAGCATGGCACCAGCTGTGTCGATGAAGTCCGTGTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555829.5
CDS CCA 90 bp TTGCAGGACAGGGTGTCAACATGGGCTTTGGGGATATCTCCAGCTTaGCCCATCACCTCAGTACGGCAGCCTGTAAGACTGTGCTGTCTG +
Preference number: 5 (lower is better)
Translates to: LQDRVSTWALGISPA*PITSVRQPVRLCCL
Trigger: CAGACAGCACAGTCTTACAGGCTGCCGTACTGAGGTGATGGGCCAAGCTGGAGATATCCCCAAAGCCCATGTTGACACCCTGTCCTGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555829.5
CDS-3UTR CAA 90 bp CAGATAGGTGCAGATGGTCACAACTCCGGAGTACGGCAGGCTGTTGGAATCCAGGGGTGGAGGCTTTTGTaGCAGAAGCAATCCTGCTCG +
Preference number: 5 (lower is better)
Translates to: QIGADGHNSGVRQAVGIQGWRLL*QKQSCS
Trigger: CGAGCAGGATTGCTTCTGCAACAAAAGCCTCCACCC...CTGGATTCCAACAGCCTGCCGTACTCCGGAGTTGTGACCATCTGCACCTATCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557325.5
CDS-3UTR CAA 90 bp ATTCGCTATACCTGGCCTTGTCCATTTCCTATGGCCGACTCCAGCCCTTGGGTTGCCCACCTCCCCTTCTaGGTTGCCACCATACTGGTA +
Preference number: 5 (lower is better)
Translates to: IRYTWPCPFPMADSSPWVAHLPF*VATILV
Trigger: TACCAGTATGGTGGCAACCAAGAAGGGGAGGTGGGC...AACCCAAGGGCTGGAGTCGGCCATAGGAAATGGACAAGGCCAGGTATAGCGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557325.5
CDS-3UTR CAA 90 bp ATGGCCGACTCCAGCCCTTGGGTTCATATTACCCTAGGTGATGGCAGCACCTTCCCAGCTTTGGCTCTGTaGGCTGAGGCTGATGTGACA +
Preference number: 5 (lower is better)
Translates to: MADSSPWVHITLGDGSTFPALAL*AEADVT
Trigger: TGTCACATCAGCCTCAGCCAACAGAGCCAAAGCTGG...GAAGGTGCTGCCATCACCTAGGGTAATATGAACCCAAGGGCTGGAGTCGGCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557325.5
CDS-3UTR CAA 90 bp TGTCTTGTGGCTGATGCTGCTCAGTGGAGTGATGCTGACCACACGGACTTCATCGGGGATATCTCCAGCTaGGCCCATCACCTCAGTACG +
Preference number: 5 (lower is better)
Translates to: CLVADAAQWSDADHTDFIGDISS*AHHLST
Trigger: CGTACTGAGGTGATGGGCCAAGCTGGAGATATCCCC...GATGAAGTCCGTGTGGTCAGCATCACTCCACTGAGCAGCATCAGCCACAAGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555829.5
CDS-3UTR CAA 90 bp GGGTGGATGCCAAAAGCCGAGTTCTGTTTCCTCTTGGGTTGGGACATGCTGCTGCACTCCCTTCTCACTTaGCTGCCAGAGGTCACACCT +
Preference number: 5 (lower is better)
Translates to: GWMPKAEFCFLLGWDMLLHSLLT*LPEVTP
Trigger: AGGTGTGACCTCTGGCAGCAAAGTGAGAAGGGAGTG...CAGCAGCATGTCCCAACCCAAGAGGAAACAGAACTCGGCTTTTGGCATCCACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555829.5
CDS-3UTR CAA 90 bp GCTGGTGCCATGCTGCAGTATGCTGTCAGCCTTCTGAAGCCCACTAAGGTCTCGCTGTTTCCTCTTGGGTaGGGACATGCTGCTGAGTAC +
Preference number: 5 (lower is better)
Translates to: AGAMLQYAVSLLKPTKVSLFPLG*GHAAEY
Trigger: GTACTCAGCAGCATGTCCCAACCCAAGAGGAAACAG...CGAGACCTTAGTGGGCTTCAGAAGGCTGACAGCATACTGCAGCATGGCACCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555829.5
CDS-3UTR CAA 90 bp GCTGGTGCCATGCTGCAGTATGCTGTCAGCCTTCTGAAGCCCACTAAGGTCTCGGAGTTCTGTTTCCTCTaGGGTTGGGACATGCTGCTG +
Preference number: 5 (lower is better)
Translates to: AGAMLQYAVSLLKPTKVSEFCFL*GWDMLL
Trigger: CAGCAGCATGTCCCAACCCAAGAGGAAACAGAACTC...CGAGACCTTAGTGGGCTTCAGAAGGCTGACAGCATACTGCAGCATGGCACCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555829.5
CDS-3UTR CAA 90 bp GACACAGCTGGTGCCATGCTGCAGTATGCTGTCAGCCTTCTGAAGCCCACTAAGGTGTCAACATGGGCTTaGGGGATATCTCCAGCTTGG +
Preference number: 5 (lower is better)
Translates to: DTAGAMLQYAVSLLKPTKVSTWA*GISPAW
Trigger: CCAAGCTGGAGATATCCCCAAAGCCCATGTTGACAC...CTTAGTGGGCTTCAGAAGGCTGACAGCATACTGCAGCATGGCACCAGCTGTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555829.5
CDS TCA 90 bp TGGGACGTCCGCTGGCTGCACTATCCCTTACAGAATCAGCAAGGGTaGAAAGCCAGGAAAGAGATGCAACCCAAAGGAGTAAGGCAGTGC +
Preference number: 5 (lower is better)
Translates to: WDVRWLHYPLQNQQG*KARKEMQPKGVRQC
Trigger: GCACTGCCTTACTCCTTTGGGTTGCATCTCTTTCCTGGCTTTTCACCCTTGCTGATTCTGTAAGGGATAGTGCAGCCAGCGGACGTCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554664.5
CDS-3UTR CAA 90 bp GGGCCAGACCACAGGGAGATCTTCCAGGTCCAAGAGCACTGCAGGGCAGATGAGGACCAGAGATGCCTCTaGAAGAGATTTTTAGGTTGT +
Preference number: 5 (lower is better)
Translates to: GPDHREIFQVQEHCRADEDQRCL*KRFLGC
Trigger: ACAACCTAAAAATCTCTTCAAGAGGCATCTCTGGTC...CTCATCTGCCCTGCAGTGCTCTTGGACCTGGAAGATCTCCCTGTGGTCTGGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334696.11
CDS-3UTR CAA 90 bp AACCAAGGCAAAGGGGCCAGACCACAGGGAGATCTTCCAGGTCCAAGAGCACTGAGCACCCTGCTTAGGTaGATCTACAAAAGCAGAAAG +
Preference number: 5 (lower is better)
Translates to: NQGKGARPQGDLPGPRALSTLLR*IYKSRK
Trigger: CTTTCTGCTTTTGTAGATCAACCTAAGCAGGGTGCT...CAGTGCTCTTGGACCTGGAAGATCTCCCTGTGGTCTGGCCCCTTTGCCTTGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334696.11
CDS-3UTR CAA 90 bp AGAGGTAAGATCCTGAGCTGCCATCTGGGGACTTTATTCATAGGCACTAGGTACAGCGTAGTCCTGCTGTaGCCTTTAGGACCACTGGGG +
Preference number: 5 (lower is better)
Translates to: RGKILSCHLGTLFIGTRYSVVLL*PLGPLG
Trigger: CCCCAGTGGTCCTAAAGGCAACAGCAGGACTACGCT...GTACCTAGTGCCTATGAATAAAGTCCCCAGATGGCAGCTCAGGATCTTACCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557325.5
CDS-3UTR CAA 90 bp ATTCGCTATACCTGGCCTTGTCCATTTCCTATGGCCGACTCCAGCCCTTGGGTTACCTCCCCTTCTTGGTaGCCACCATACTGGTATTTC +
Preference number: 5 (lower is better)
Translates to: IRYTWPCPFPMADSSPWVTSPSW*PPYWYF
Trigger: GAAATACCAGTATGGTGGCAACCAAGAAGGGGAGGT...AACCCAAGGGCTGGAGTCGGCCATAGGAAATGGACAAGGCCAGGTATAGCGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557325.5
CDS-3UTR CAA 90 bp GGGCCAGACCACAGGGAGATCTTCCAGGTCCAAGAGCACTGCAGGGCAGATGAGCAAGGATACAGAAATTaGCCTAGTAACTTGCACACA +
Preference number: 5 (lower is better)
Translates to: GPDHREIFQVQEHCRADEQGYRN*PSNLHT
Trigger: TGTGTGCAAGTTACTAGGCAAATTTCTGTATCCTTG...CTCATCTGCCCTGCAGTGCTCTTGGACCTGGAAGATCTCCCTGTGGTCTGGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334696.11
CDS-3UTR CAA 90 bp CGCTATACCTGGCCTTGTCCATTTCCTATGGCCGACTCCAGCCCTTGGGTTCATCTTTTCTCCTCTCTGTaGCAGGCCACAGAAAACAAC +
Preference number: 5 (lower is better)
Translates to: RYTWPCPFPMADSSPWVHLFSSL*QATENN
Trigger: GTTGTTTTCTGTGGCCTGCAACAGAGAGGAGAAAAG...ATGAACCCAAGGGCTGGAGTCGGCCATAGGAAATGGACAAGGCCAGGTATAGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557325.5
CDS-3UTR CAA 90 bp GCCATGCTGCAGTATGCTGTCAGCCTTCTGAAGCCCACTAAGGTCTCGGCTCGCTACTCACATTTCACCTaGTTTGTCTTGTGGCTGATG +
Preference number: 5 (lower is better)
Translates to: AMLQYAVSLLKPTKVSARYSHFT*FVLWLM
Trigger: CATCAGCCACAAGACAAACAAGGTGAAATGTGAGTA...GCGAGCCGAGACCTTAGTGGGCTTCAGAAGGCTGACAGCATACTGCAGCATGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555829.5
CDS GCA 90 bp GAGTACTGGAAAGAAGGACTAGAGCAACCTCTGAGGGTCCATTTCTaGTACCATTTCTCTGGTGGACACCTAACTCCTCCACCTTTCCCC +
Preference number: 5 (lower is better)
Translates to: EYWKEGLEQPLRVHF*YHFSGGHLTPPPFP
Trigger: GGGGAAAGGTGGAGGAGTTAGGTGTCCACCAGAGAAATGGTAGCAGAAATGGACCCTCAGAGGTTGCTCTAGTCCTTCTTTCCAGTACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556242.5
CDS-3UTR CAA 90 bp ACTTCTGAAGCAGTTTATGAAGAGGCTGGAAGACTTAGCAGGCTCATGTGTCCAGTGCTGGCGCTGACATaGATGGGGCACATGGAAGAC +
Preference number: 5 (lower is better)
Translates to: TSEAVYEEAGRLSRLMCPVLALT*MGHMED
Trigger: GTCTTCCATGTGCCCCATCAATGTCAGCGCCAGCAC...TGGACACATGAGCCTGCTAAGTCTTCCAGCCTCTTCATAAACTGCTTCAGAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557325.5
CDS-3UTR CAA 90 bp CGCTATACCTGGCCTTGTCCATTTCCTATGGCCGACTCCAGCCCTTGGGTTCATAGCACCCTGCTTAGGTaGATCTACAAAAGCAGAAAG +
Preference number: 5 (lower is better)
Translates to: RYTWPCPFPMADSSPWVHSTLLR*IYKSRK
Trigger: CTTTCTGCTTTTGTAGATCAACCTAAGCAGGGTGCT...ATGAACCCAAGGGCTGGAGTCGGCCATAGGAAATGGACAAGGCCAGGTATAGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557325.5
CDS-3UTR CAA 90 bp TTTGGGAAGCGGGTGGATCAATTGAGATCAGGAGTTGGAAACCAGCCTGGCCAATGTAATCCCAGCACTTaGGGAAGCGGGTGGATCAAT +
Preference number: 5 (lower is better)
Translates to: FGKRVDQLRSGVGNQPGQCNPST*GSGWIN
Trigger: ATTGATCCACCCGCTTCCCAAAGTGCTGGGATTACA...TTGGCCAGGCTGGTTTCCAACTCCTGATCTCAATTGATCCACCCGCTTCCCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334696.11
CDS-3UTR CAA 90 bp ATGAGGACCAGTACCTATTCAGGCCAGCTCAAGTGGAGATGGTCTCATCGTAAACAGTCATGTCCAGCTTaGGCTCTGTTGGCTGAGGCT +
Preference number: 5 (lower is better)
Translates to: MRTSTYSGQLKWRWSHRKQSCPA*ALLAEA
Trigger: AGCCTCAGCCAACAGAGCCAAAGCTGGACATGACTG...TTTACGATGAGACCATCTCCACTTGAGCTGGCCTGAATAGGTACTGGTCCTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557325.5
CDS-3UTR CAA 90 bp ATCCTAGTTGTGAGGAATGTCTTGCAGGAGTACTGGAAAGAAGGACTAGAGCAAGTGCTGGCGCTGACATaGATGGGGCACATGGAAGAC +
Preference number: 5 (lower is better)
Translates to: ILVVRNVLQEYWKEGLEQVLALT*MGHMED
Trigger: GTCTTCCATGTGCCCCATCAATGTCAGCGCCAGCAC...TTGCTCTAGTCCTTCTTTCCAGTACTCCTGCAAGACATTCCTCACAACTAGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556242.5
CDS-3UTR CAA 90 bp GCAGCAGAGCTAGTTAGCATGGATGAGGAAAAATTTGTGGATGCCGTTAACTCTCCAGGGCTCCCAGGGTaGCTAGTCTTGCAGCTTTCA +
Preference number: 5 (lower is better)
Translates to: AAELVSMDEEKFVDAVNSPGLPG*LVLQLS
Trigger: TGAAAGCTGCAAGACTAGCAACCCTGGGAGCCCTGG...AGAGTTAACGGCATCCACAAATTTTTCCTCATCCATGCTAACTAGCTCTGCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557325.5
CDS-3UTR CAA 90 bp AACCAAGGCAAAGGGGCCAGACCACAGGGAGATCTTCCAGGTCCAAGAGCACTGCATTGGATTATTTCTTaGGGCTGTTTCCAACTCAAG +
Preference number: 5 (lower is better)
Translates to: NQGKGARPQGDLPGPRALHWIIS*GCFQLK
Trigger: CTTGAGTTGGAAACAGCCCAAAGAAATAATCCAATG...CAGTGCTCTTGGACCTGGAAGATCTCCCTGTGGTCTGGCCCCTTTGCCTTGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334696.11
CDS-3UTR CAA 90 bp AACCAAGGCAAAGGGGCCAGACCACAGGGAGATCTTCCAGGTCCAAGAGCACTGCTTATATCTCTGCATTaGTCAAGCTGGAACAGTCTT +
Preference number: 5 (lower is better)
Translates to: NQGKGARPQGDLPGPRALLISLH*SSWNSL
Trigger: AAGACTGTTCCAGCTTGACAAATGCAGAGATATAAG...CAGTGCTCTTGGACCTGGAAGATCTCCCTGTGGTCTGGCCCCTTTGCCTTGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334696.11
CDS-3UTR CAA 90 bp CAGATAGGTGCAGATGGTCACAACTCCGGAGTACGGCAGGCTGTTGGAATCCAGTGGATGAGGAAAAATTaGTGGATGCCGTTAACTCTG +
Preference number: 5 (lower is better)
Translates to: QIGADGHNSGVRQAVGIQWMRKN*WMPLTL
Trigger: CAGAGTTAACGGCATCCACAAATTTTTCCTCATCCA...CTGGATTCCAACAGCCTGCCGTACTCCGGAGTTGTGACCATCTGCACCTATCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557325.5
CDS TCA 90 bp CAGGGCTGTGATGTAGCTGAGATCCATGCACAGGAAAGGACTGCCTaGGGTGAAGTTTTCCAAGTTATCACACACTTCCCTGGCTTTTCT +
Preference number: 5 (lower is better)
Translates to: QGCDVAEIHAQERTA*GEVFQVITHFPGFS
Trigger: AGAAAAGCCAGGGAAGTGTGTGATAACTTGGAAAACTTCACCTCAGGCAGTCCTTTCCTGTGCATGGATCTCAGCTACATCACAGCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334696.11
ENST00000555829.5
ENST00000557325.5
CDS-3UTR CAA 90 bp AAAGAGAGCATGAGGGACATTAAATATGGTTCTCCCTGGAAATGTTGGTCCACTGTGCTGGCGCTGACATaGATGGGGCACATGGAAGAC +
Preference number: 5 (lower is better)
Translates to: KESMRDIKYGSPWKCWSTVLALT*MGHMED
Trigger: GTCTTCCATGTGCCCCATCAATGTCAGCGCCAGCAC...AGTGGACCAACATTTCCAGGGAGAACCATATTTAATGTCCCTCATGCTCTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334696.11
CDS-3UTR CAA 90 bp ATAATAGATCCTGGAATAGCACAGACACTGACCTCTGACCACAGACCAAAAGTTCCAGGGCTCCCAGGGTaGCTAGTCTTGCAGCTTTCA +
Preference number: 5 (lower is better)
Translates to: IIDPGIAQTLTSDHRPKVPGLPG*LVLQLS
Trigger: TGAAAGCTGCAAGACTAGCAACCCTGGGAGCCCTGG...AACTTTTGGTCTGTGGTCAGAGGTCAGTGTCTGTGCTATTCCAGGATCTATTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334696.11
CDS-3UTR CAA 90 bp AAAGAGAGCATGAGGGACATTAAATATGGTTCTCCCTGGAAATGTTGGTCCACTGCCCACCTCCCCTTCTaGGTTGCCACCATACTGGTA +
Preference number: 5 (lower is better)
Translates to: KESMRDIKYGSPWKCWSTAHLPF*VATILV
Trigger: TACCAGTATGGTGGCAACCAAGAAGGGGAGGTGGGC...AGTGGACCAACATTTCCAGGGAGAACCATATTTAATGTCCCTCATGCTCTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334696.11
CDS-3UTR CAA 90 bp TTTGGGAAGCGGGTGGATCAATTGAGATCAGGAGTTGGAAACCAGCCTGGCCAACCAAAACTATACTTTTaGGCTCACAGGGCTCTCTGT +
Preference number: 5 (lower is better)
Translates to: FGKRVDQLRSGVGNQPGQPKLYF*AHRALC
Trigger: ACAGAGAGCCCTGTGAGCCAAAAAGTATAGTTTTGG...TTGGCCAGGCTGGTTTCCAACTCCTGATCTCAATTGATCCACCCGCTTCCCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334696.11
CDS-3UTR CAA 90 bp ACTTCTGAAGCAGTTTATGAAGAGGCTGGAAGACTTAGCAGGCTCATGTGTCCATCGCTATACCTGGCCTaGTCCATTTCCTATGGCCGA +
Preference number: 5 (lower is better)
Translates to: TSEAVYEEAGRLSRLMCPSLYLA*SISYGR
Trigger: TCGGCCATAGGAAATGGACAAGGCCAGGTATAGCGA...TGGACACATGAGCCTGCTAAGTCTTCCAGCCTCTTCATAAACTGCTTCAGAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557325.5
CDS TCA 90 bp CTTTTCAGAGGTGTATTCGGGATTTCAGGAGTCGGGGAGGCAAGTTaGAGAGCTTCCAACTTTATGCAACTTTCAGGAAAGAAGGCTGCG +
Preference number: 5 (lower is better)
Translates to: LFRGVFGISGVGEAS*RASNFMQLSGKKAA
Trigger: CGCAGCCTTCTTTCCTGAAAGTTGCATAAAGTTGGAAGCTCTTCAACTTGCCTCCCCGACTCCTGAAATCCCGAATACACCTCTGAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554664.5
CDS CCA 90 bp ATAATAGTAAGAGAAAGCATAGAAGGAACCTCTCTGGACCTCCTCTaGCTGGTGAAGTTTTCCTCGTACCACCCTCAGCACTTCGGCATA +
Preference number: 5 (lower is better)
Translates to: IIVRESIEGTSLDLL*LVKFSSYHPQHFGI
Trigger: TATGCCGAAGTGCTGAGGGTGGTACGAGGAAAACTTCACCAGCCAGAGGAGGTCCAGAGAGGTTCCTTCTATGCTTTCTCTTACTATTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334696.11
ENST00000557325.5
CDS-3UTR CAA 90 bp CCTTTTTGCATGGTAGCCATTCCTAACCCTACATCAGAACTATTCAGCTCCAGTGACACCTTGAGTTCCTaGGTTTGGTCCACGTCCCAT +
Preference number: 5 (lower is better)
Translates to: PFCMVAIPNPTSELFSSSDTLSS*VWSTSH
Trigger: ATGGGACGTGGACCAAACCAAGGAACTCAAGGTGTC...ACTGGAGCTGAATAGTTCTGATGTAGGGTTAGGAATGGCTACCATGCAAAAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557325.5
CDS-3UTR CAA 90 bp AAAACTTTTGGTTATGAGGACCAGTACCTATTCAGGCCAGCTCAAGTGGAGATGCAGCTCTCAGACACCTaGAGTTCCTTGGTTTGGTCC +
Preference number: 5 (lower is better)
Translates to: KTFGYEDQYLFRPAQVEMQLSDT*SSLVWS
Trigger: GGACCAAACCAAGGAACTCAAGGTGTCTGAGAGCTG...CATCTCCACTTGAGCTGGCCTGAATAGGTACTGGTCCTCATAACCAAAAGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557325.5
CDS-3UTR CAA 90 bp GCCGTTGGTATTGGTGTTCTTTTGACACAGCTCTCAGACACCTTGAGTTCCTTGGGTATTGGTGTTCTTTaGACACAGCTCTCAGACACC +
Preference number: 5 (lower is better)
Translates to: AVGIGVLLTQLSDTLSSLGIGVL*TQLSDT
Trigger: GGTGTCTGAGAGCTGTGTCAAAAGAACACCAATACC...CAAGGAACTCAAGGTGTCTGAGAGCTGTGTCAAAAGAACACCAATACCAACGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557325.5
CDS-3UTR CAA 90 bp TTTGGGGTAAATAATTCACAGTCAAGAGCTCTGAGCACTTGGATTCAAAAAGAGAGCGTAGTCCTGCTGTaGCCTTTAGGACCACTGGGG +
Preference number: 5 (lower is better)
Translates to: FGVNNSQSRALSTWIQKESVVLL*PLGPLG
Trigger: CCCCAGTGGTCCTAAAGGCAACAGCAGGACTACGCT...CTCTTTTTGAATCCAAGTGCTCAGAGCTCTTGACTGTGAATTATTTACCCCAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334696.11
CDS-3UTR CAA 90 bp AGAGGTAAGATCCTGAGCTGCCATCTGGGGACTTTATTCATAGGCACTAGGTACATGACCAGTCTGCTGTaGTGGCTACTCTGCATTTAT +
Preference number: 5 (lower is better)
Translates to: RGKILSCHLGTLFIGTRYMTSLL*WLLCIY
Trigger: ATAAATGCAGAGTAGCCACAACAGCAGACTGGTCAT...GTACCTAGTGCCTATGAATAAAGTCCCCAGATGGCAGCTCAGGATCTTACCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557325.5
CDS CCA 90 bp TTATCCCAAATGATCCTAGTTGTGAGGAATGTCTTGCAGGAGTACTaGAAAGAAGGACTAGAGCAACCTCTGAGGGTCCATTTCTGCTAC +
Preference number: 5 (lower is better)
Translates to: LSQMILVVRNVLQEY*KEGLEQPLRVHFCY
Trigger: GTAGCAGAAATGGACCCTCAGAGGTTGCTCTAGTCCTTCTTTCCAGTACTCCTGCAAGACATTCCTCACAACTAGGATCATTTGGGATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556242.5
CDS-3UTR CAA 90 bp TACATAGGGAGTAATCTCTTAAAAGCTAGTGTCATCCTTGCATTACCACAACCAGCTGGGTGGAGGCTTTaGTTGCAGAAGCAATCCTGC +
Preference number: 5 (lower is better)
Translates to: YIGSNLLKASVILALPQPAGWRL*LQKQSC
Trigger: GCAGGATTGCTTCTGCAACAAAAGCCTCCACCCAGC...TGGTTGTGGTAATGCAAGGATGACACTAGCTTTTAAGAGATTACTCCCTATGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556242.5
CDS-3UTR CAA 90 bp ACTTCTGAAGCAGTTTATGAAGAGGCTGGAAGACTTAGCAGGCTCATGTGTCCAGTAGCCCCTAGGAGTTaGTTCCAGAGTTTTCTCAAA +
Preference number: 5 (lower is better)
Translates to: TSEAVYEEAGRLSRLMCPVAPRS*FQSFLK
Trigger: TTTGAGAAAACTCTGGAACAAACTCCTAGGGGCTAC...TGGACACATGAGCCTGCTAAGTCTTCCAGCCTCTTCATAAACTGCTTCAGAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557325.5
CDS-3UTR CAA 90 bp AAAACTTTTGGTTATGAGGACCAGTACCTATTCAGGCCAGCTCAAGTGGAGATGCCAGGGTTGCTAGTCTaGCAGCTTTCAATCCAAATC +
Preference number: 5 (lower is better)
Translates to: KTFGYEDQYLFRPAQVEMPGLLV*QLSIQI
Trigger: GATTTGGATTGAAAGCTGCAAGACTAGCAACCCTGG...CATCTCCACTTGAGCTGGCCTGAATAGGTACTGGTCCTCATAACCAAAAGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557325.5
CDS-3UTR CAA 90 bp ACTCAATGGAGTAATGTTAAAAATAAGGTTTCCCATGGACTGTGTGAGGGCCAGGGCACCCTACTTTTGTaGACAAAGATGGGAAGGGGT +
Preference number: 5 (lower is better)
Translates to: TQWSNVKNKVSHGLCEGQGTLLL*TKMGRG
Trigger: ACCCCTTCCCATCTTTGTCAACAAAAGTAGGGTGCC...CTGGCCCTCACACAGTCCATGGGAAACCTTATTTTTAACATTACTCCATTGAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000334696.11
CDS-3UTR CAA 90 bp GATCCTAGTTGTGAGGAATGTCTTGCAGGAGTACTGGAAAGAAGGACTAGAGCAGTTGTGAGGAATGTCTaGCAGGAGTACTGGAAAGAA +
Preference number: 5 (lower is better)
Translates to: DPSCEECLAGVLERRTRAVVRNV*QEYWKE
Trigger: TTCTTTCCAGTACTCCTGCAAGACATTCCTCACAAC...TGCTCTAGTCCTTCTTTCCAGTACTCCTGCAAGACATTCCTCACAACTAGGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556242.5
CDS-3UTR CAA 90 bp GAAAACAAGTTTAGAATCATAGAAAACACTGTTAACACATTAGCCTGGGAGGTGGGGTGGAGGCTTTTGTaGCAGAAGCAATCCTGCTCG +
Preference number: 5 (lower is better)
Translates to: ENKFRIIENTVNTLAWEVGWRLL*QKQSCS
Trigger: CGAGCAGGATTGCTTCTGCAACAAAAGCCTCCACCC...CACCTCCCAGGCTAATGTGTTAACAGTGTTTTCTATGATTCTAAACTTGTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000334696.11
CDS-3UTR CAA 90 bp CATCTTCTACCACCAAAGATTTTTGTCATCATGGGTTGTTGCCTAATTTCTCAAGGGTGGAGGCTTTTGTaGCAGAAGCAATCCTGCTCG +
Preference number: 5 (lower is better)
Translates to: HLLPPKIFVIMGCCLISQGWRLL*QKQSCS
Trigger: CGAGCAGGATTGCTTCTGCAACAAAAGCCTCCACCC...TTGAGAAATTAGGCAACAACCCATGATGACAAAAATCTTTGGTGGTAGAAGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556242.5
CDS-3UTR CAA 90 bp AAAACTTTTGGTTATGAGGACCAGTACCTATTCAGGCCAGCTCAAGTGGAGATGAGGAGTCTGTGGTCATaGATCTCTTGCCTCTCATTT +
Preference number: 5 (lower is better)
Translates to: KTFGYEDQYLFRPAQVEMRSLWS*ISCLSF
Trigger: AAATGAGAGGCAAGAGATCAATGACCACAGACTCCT...CATCTCCACTTGAGCTGGCCTGAATAGGTACTGGTCCTCATAACCAAAAGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557325.5
CDS-3UTR CAA 90 bp TTGCTCTCTAGTTCAAATATCAGGAGGGCCTGGCTGAGTTTAACTCATGGCTGGATTTTGCTAGGGGTCTaGTATATCTACATCTTATCC +
Preference number: 5 (lower is better)
Translates to: LLSSSNIRRAWLSLTHGWILLGV*YIYILS
Trigger: GGATAAGATGTAGATATACAAGACCCCTAGCAAAAT...CCAGCCATGAGTTAAACTCAGCCAGGCCCTCCTGATATTTGAACTAGAGAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557325.5
CDS-3UTR CAA 90 bp CTGCTCACAAGCTTCCCTTTTTGCATGGTAGCCATTCCTAACCCTACATCAGAAACCTTCCAGACCAAATaGTTGGTAGTTGAAGATTCT +
Preference number: 5 (lower is better)
Translates to: LLTSFPFCMVAIPNPTSETFQTK*LVVEDS
Trigger: AGAATCTTCAACTACCAACAATTTGGTCTGGAAGGT...TTCTGATGTAGGGTTAGGAATGGCTACCATGCAAAAAGGGAAGCTTGTGAGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557325.5
CDS-3UTR CAA 90 bp TCACTGCTCACCATGCCTTCAACTGCCATGTTTATACATCATACCCTACAGAACGGAAGCTGTCCTATTTaGTCCATGGAACAAAACAGA +
Preference number: 5 (lower is better)
Translates to: SLLTMPSTAMFIHHTLQNGSCPI*SMEQNR
Trigger: TCTGTTTTGTTCCATGGACAAAATAGGACAGCTTCC...GTTCTGTAGGGTATGATGTATAAACATGGCAGTTGAAGGCATGGTGAGCAGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556242.5
CDS-3UTR CAA 90 bp TCACTGCTCACCATGCCTTCAACTGCCATGTTTATACATCATACCCTACAGAACTACCACCAAAGATTTTaGTCATCATGGGTTGTTGCC +
Preference number: 5 (lower is better)
Translates to: SLLTMPSTAMFIHHTLQNYHQRF*SSWVVA
Trigger: GGCAACAACCCATGATGACAAAAATCTTTGGTGGTA...GTTCTGTAGGGTATGATGTATAAACATGGCAGTTGAAGGCATGGTGAGCAGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556242.5
CDS-3UTR CAA 90 bp TTTGGGGTAAATAATTCACAGTCAAGAGCTCTGAGCACTTGGATTCAAAAAGAGCCAGGGTTGCTAGTCTaGCAGCTTTCAATCCAAATC +
Preference number: 5 (lower is better)
Translates to: FGVNNSQSRALSTWIQKEPGLLV*QLSIQI
Trigger: GATTTGGATTGAAAGCTGCAAGACTAGCAACCCTGG...CTCTTTTTGAATCCAAGTGCTCAGAGCTCTTGACTGTGAATTATTTACCCCAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334696.11
CDS-3UTR CAA 90 bp GAAAACCAGGTCTCATTAATGCTAGTTATTACTTTATCACAGCACCAGATTTCCACCTCCCCTTCTTGGTaGCCACCATACTGGTATTTC +
Preference number: 5 (lower is better)
Translates to: ENQVSLMLVITLSQHQISTSPSW*PPYWYF
Trigger: GAAATACCAGTATGGTGGCAACCAAGAAGGGGAGGT...GGAAATCTGGTGCTGTGATAAAGTAATAACTAGCATTAATGAGACCTGGTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334696.11
CDS-3UTR CAA 90 bp GCAGCAGAGCTAGTTAGCATGGATGAGGAAAAATTTGTGGATGCCGTTAACTCTTTTGTCTTTTTATGCTaGAGAGTTTCCAAGTGCAGC +
Preference number: 5 (lower is better)
Translates to: AAELVSMDEEKFVDAVNSFVFLC*RVSKCS
Trigger: GCTGCACTTGGAAACTCTCAAGCATAAAAAGACAAA...AGAGTTAACGGCATCCACAAATTTTTCCTCATCCATGCTAACTAGCTCTGCTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000557325.5
CDS-3UTR CAA 90 bp GAAAACCAGGTCTCATTAATGCTAGTTATTACTTTATCACAGCACCAGATTTCCAGAATTTGTTCATGTTaGGTGGCAGACTGGTGGCCA +
Preference number: 5 (lower is better)
Translates to: ENQVSLMLVITLSQHQISRICSC*VADWWP
Trigger: TGGCCACCAGTCTGCCACCAAACATGAACAAATTCT...GGAAATCTGGTGCTGTGATAAAGTAATAACTAGCATTAATGAGACCTGGTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334696.11
CDS-3UTR CAA 90 bp ATCCTAGTTGTGAGGAATGTCTTGCAGGAGTACTGGAAAGAAGGACTAGAGCAATTTTGTCATCATGGGTaGTTGCCTAATTTCTCAAGT +
Preference number: 5 (lower is better)
Translates to: ILVVRNVLQEYWKEGLEQFCHHG*LPNFSS
Trigger: ACTTGAGAAATTAGGCAACAACCCATGATGACAAAA...TTGCTCTAGTCCTTCTTTCCAGTACTCCTGCAAGACATTCCTCACAACTAGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556242.5
CDS-3UTR CAA 90 bp GAAAACAAGTTTAGAATCATAGAAAACACTGTTAACACATTAGCCTGGGAGGTGGTAGCCCCTAGGAGTTaGTTCCAGAGTTTTCTCAAA +
Preference number: 5 (lower is better)
Translates to: ENKFRIIENTVNTLAWEVVAPRS*FQSFLK
Trigger: TTTGAGAAAACTCTGGAACAAACTCCTAGGGGCTAC...CACCTCCCAGGCTAATGTGTTAACAGTGTTTTCTATGATTCTAAACTTGTTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000334696.11
CDS-3UTR CAA 90 bp ATAATAGATCCTGGAATAGCACAGACACTGACCTCTGACCACAGACCAAAAGTTTGGTCCCATTTTGCGTaGTTGAATTATACATGGAAA +
Preference number: 5 (lower is better)
Translates to: IIDPGIAQTLTSDHRPKVWSHFA*LNYTWK
Trigger: TTTCCATGTATAATTCAACAACGCAAAATGGGACCA...AACTTTTGGTCTGTGGTCAGAGGTCAGTGTCTGTGCTATTCCAGGATCTATTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334696.11
CDS-3UTR CAA 90 bp AAAGAGAGCATGAGGGACATTAAATATGGTTCTCCCTGGAAATGTTGGTCCACTAAAGATCCAAAGATTTaGGAAGGAGAGATTAGAGCA +
Preference number: 5 (lower is better)
Translates to: KESMRDIKYGSPWKCWSTKDPKI*EGEIRA
Trigger: TGCTCTAATCTCTCCTTCCAAAATCTTTGGATCTTT...AGTGGACCAACATTTCCAGGGAGAACCATATTTAATGTCCCTCATGCTCTCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334696.11
CDS-3UTR CAA 90 bp TTTGGGGTAAATAATTCACAGTCAAGAGCTCTGAGCACTTGGATTCAAAAAGAGTTTTACTGTGGGTTTTaGAAGAGGTCTCGTCACAAG +
Preference number: 5 (lower is better)
Translates to: FGVNNSQSRALSTWIQKEFYCGF*KRSRHK
Trigger: CTTGTGACGAGACCTCTTCAAAAACCCACAGTAAAA...CTCTTTTTGAATCCAAGTGCTCAGAGCTCTTGACTGTGAATTATTTACCCCAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000334696.11
CDS-3UTR CAA 90 bp GAAAACAAGTTTAGAATCATAGAAAACACTGTTAACACATTAGCCTGGGAGGTGGCACTGAGTACAACATaGGATTATTTCTTTGGGCTG +
Preference number: 5 (lower is better)
Translates to: ENKFRIIENTVNTLAWEVALSTT*DYFFGL
Trigger: CAGCCCAAAGAAATAATCCAATGTTGTACTCAGTGC...CACCTCCCAGGCTAATGTGTTAACAGTGTTTTCTATGATTCTAAACTTGTTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334696.11
CDS-3UTR CAA 90 bp GAAAACCAGGTCTCATTAATGCTAGTTATTACTTTATCACAGCACCAGATTTCCGACAATGTCACAACCTaGCTGGAATCTCAGGAAAAA +
Preference number: 5 (lower is better)
Translates to: ENQVSLMLVITLSQHQISDNVTT*LESQEK
Trigger: TTTTTCCTGAGATTCCAGCAAGGTTGTGACATTGTC...GGAAATCTGGTGCTGTGATAAAGTAATAACTAGCATTAATGAGACCTGGTTTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334696.11
CDS-3UTR CAA 90 bp GGTTGTAGGTTTGCTTACTCTAAAGAACATCTTGCCCAGAAGTCTGATTTGAGACCAAGTAAGGTATTCTaGGGAATAATTTTTAGAGCC +
Preference number: 5 (lower is better)
Translates to: GCRFAYSKEHLAQKSDLRPSKVF*GIIFRA
Trigger: GGCTCTAAAAATTATTCCCAAGAATACCTTACTTGG...TCTCAAATCAGACTTCTGGGCAAGATGTTCTTTAGAGTAAGCAAACCTACAACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334696.11
CDS-3UTR CAA 90 bp GAGAGAAAGCTGATCTCACACATGATCTCAATCTCATTAGTGAATAGCATGAAAACTCACCTGCTTAGGTaGATCTACAAAAGCAGAAAG +
Preference number: 5 (lower is better)
Translates to: ERKLISHMISISLVNSMKTHLLR*IYKSRK
Trigger: CTTTCTGCTTTTGTAGATCAACCTAAGCAGGTGAGT...TTTCATGCTATTCACTAATGAGATTGAGATCATGTGTGAGATCAGCTTTCTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556242.5
CDS-3UTR CAA 90 bp TTTGGGGTAAATAATTCACAGTCAAGAGCTCTGAGCACTTGGATTCAAAAAGAGAACTCTCATTCCAAATaGCTCCTAAGATGGACAAAT +
Preference number: 5 (lower is better)
Translates to: FGVNNSQSRALSTWIQKENSHSK*LLRWTN
Trigger: ATTTGTCCATCTTAGGAGCAATTTGGAATGAGAGTT...CTCTTTTTGAATCCAAGTGCTCAGAGCTCTTGACTGTGAATTATTTACCCCAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334696.11
CDS-3UTR CAA 90 bp TTTGGGGTAAATAATTCACAGTCAAGAGCTCTGAGCACTTGGATTCAAAAAGAGAGAAACAGTCTGCTTTaGAACCAAGTAAGGTATTCT +
Preference number: 5 (lower is better)
Translates to: FGVNNSQSRALSTWIQKERNSLL*NQVRYS
Trigger: AGAATACCTTACTTGGTTCAAAAGCAGACTGTTTCT...CTCTTTTTGAATCCAAGTGCTCAGAGCTCTTGACTGTGAATTATTTACCCCAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334696.11
CDS-3UTR CAA 90 bp CATCTTCTACCACCAAAGATTTTTGTCATCATGGGTTGTTGCCTAATTTCTCAAAAGCTAGTGTCATCCTaGCATTACCACAACCAATTT +
Preference number: 5 (lower is better)
Translates to: HLLPPKIFVIMGCCLISQKLVSS*HYHNQF
Trigger: AAATTGGTTGTGGTAATGCAAGGATGACACTAGCTT...TTGAGAAATTAGGCAACAACCCATGATGACAAAAATCTTTGGTGGTAGAAGATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556242.5
CDS-3UTR CAA 90 bp TACATAGGGAGTAATCTCTTAAAAGCTAGTGTCATCCTTGCATTACCACAACCATGTCATCATGGGTTGTaGCCTAATTTCTCAAGTATA +
Preference number: 5 (lower is better)
Translates to: YIGSNLLKASVILALPQPCHHGL*PNFSSI
Trigger: TATACTTGAGAAATTAGGCAACAACCCATGATGACA...TGGTTGTGGTAATGCAAGGATGACACTAGCTTTTAAGAGATTACTCCCTATGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556242.5
CDS GCA 72 bp ACCCAGGCCGCAGGACGAAGCGCTACCGCCTGGGGCTaGCAGCTCCCGCCTCCCGCCCGCAGAGCCCGGGCC +
Preference number: 6 (lower is better)
Translates to: TQAAGRSATAWG*QLPPPARRARA
Trigger: GGCCCGGGCTCTGCGGGCGGGAGGCGGGAGCTGGCAGCCCCAGGCGGTAGCGCTTCGTCCTGCGGCCTGGGT
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554664.5
CDS GCA 72 bp CGGGGGCGAGGGCAAGGTAGCCGCGGCCACGCTGGCTaGGGCATGGAGACACGGGAGGAACGGGACCCGCGG +
Preference number: 6 (lower is better)
Translates to: RGRGQGSRGHAG*GMETREERDPR
Trigger: CCGCGGGTCCCGTTCCTCCCGTGTCTCCATGCCGCAGCCAGCGTGGCCGCGGCTACCTTGCCCTCGCCCCCG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554664.5
CDS GCA 72 bp GTGGCAGCACTCCCCTCCCCGCCCGGCTCCCTGGCGTaGCGCTGCTCTTCGGAGGCTGGCAGCCTCGCCCTC +
Preference number: 6 (lower is better)
Translates to: VAALPSPPGSLA*RCSSEAGSLAL
Trigger: GAGGGCGAGGCTGCCAGCCTCCGAAGAGCAGCGGCACGCCAGGGAGCCGGGCGGGGAGGGGAGTGCTGCCAC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554664.5
CDS GCA 72 bp GGAGGAACGGGACCCGCGGGCGGCACGGGAAAGGGCTaGGGCTCAGACCACTGCGGCGGGACGGGCGGATCA +
Preference number: 6 (lower is better)
Translates to: GGTGPAGGTGKG*GSDHCGGTGGS
Trigger: TGATCCGCCCGTCCCGCCGCAGTGGTCTGAGCCGCAGCCCTTTCCCGTGCCGCCCGCGGGTCCCGTTCCTCC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554664.5
CDS CCA 72 bp GAGGGCAAGGTAGCCGCGGCCACGCTGGCTGCGGCATaGAGACACGGGAGGAACGGGACCCGCGGGCGGCAC +
Preference number: 6 (lower is better)
Translates to: EGKVAAATLAAA*RHGRNGTRGRH
Trigger: GTGCCGCCCGCGGGTCCCGTTCCTCCCGTGTCTCCATGCCGCAGCCAGCGTGGCCGCGGCTACCTTGCCCTC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554664.5
CDS CCA 72 bp GCCCGGCTCCCTGGCGTGCCGCTGCTCTTCGGAGGCTaGCAGCCTCGCCCTCAACCACCGCCCTCGGGAAAG +
Preference number: 6 (lower is better)
Translates to: ARLPGVPLLFGG*QPRPQPPPSGK
Trigger: CTTTCCCGAGGGCGGTGGTTGAGGGCGAGGCTGCCAGCCTCCGAAGAGCAGCGGCACGCCAGGGAGCCGGGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554664.5
CDS CAA 72 bp TTGACCAGGAACAAGGAAAACGCGCGCGCGCCACCCTaGCGCGGCAGCCCGCCGCCCTCGGCGCGACCTCCG +
Preference number: 6 (lower is better)
Translates to: LTRNKENARAPP*RGSPPPSARPP
Trigger: CGGAGGTCGCGCCGAGGGCGGCGGGCTGCCGCGCAAGGGTGGCGCGCGCGCGTTTTCCTTGTTCCTGGTCAA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556242.5
CDS TCA 72 bp CTCCTGAGGCAAGGGCGCCCCGACCGCAGCGACTCCTaGCACACCCAGGCCGCAGGACGAAGCGCTACCGCC +
Preference number: 6 (lower is better)
Translates to: LLRQGRPDRSDS*HTQAAGRSATA
Trigger: GGCGGTAGCGCTTCGTCCTGCGGCCTGGGTGTGTCAGGAGTCGCTGCGGTCGGGGCGCCCTTGCCTCAGGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554664.5
CDS CAA 90 bp ATTTCTTTGTTGACCAGGAACAAGGAAAACGCGCGCGCGCCACCCTaGCGCGGCAGCCCGCCGCCCTCGGCGCGACCTCCGCCCCACCCC +
Preference number: 6 (lower is better)
Translates to: ISLLTRNKENARAPP*RGSPPPSARPPPHP
Trigger: GGGGTGGGGCGGAGGTCGCGCCGAGGGCGGCGGGCTGCCGCGCAAGGGTGGCGCGCGCGCGTTTTCCTTGTTCCTGGTCAACAAAGAAAT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556242.5
CDS GCA 72 bp GTGGCTGGGTGGAGGCTTTTGTTGCAGAAGCAATCCTaGTCGCACACCTGCAGAGGCTGCTTGTGTCTGCCG +
Preference number: 6 (lower is better)
Translates to: VAGWRLLLQKQS*SHTCRGCLCLP
Trigger: CGGCAGACACAAGCAGCCTCTGCAGGTGTGCGAGCAGGATTGCTTCTGCAACAAAAGCCTCCACCCAGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553284.5
CDS GCA 72 bp CAGAGGCTGCTTGTGTCTGCCGGTTCCCTGAGTCCTTaGTTTCGCTGCAGGTTGCCTTTTGCTCTTTGCTCC +
Preference number: 6 (lower is better)
Translates to: QRLLVSAGSLSP*FRCRLPFALCS
Trigger: GGAGCAAAGAGCAAAAGGCAACCTGCAGCGAAAGCAAGGACTCAGGGAACCGGCAGACACAAGCAGCCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553284.5
CDS GCA 72 bp GTGGCTGGGTGGAGGCTTTTGTTGCAGAAGCAATCCTaGTCGCACACCTGCAGAGGCTGTAGTCTCAGCTAC +
Preference number: 6 (lower is better)
Translates to: VAGWRLLLQKQS*SHTCRGCSLSY
Trigger: GTAGCTGAGACTACAGCCTCTGCAGGTGTGCGAGCAGGATTGCTTCTGCAACAAAAGCCTCCACCCAGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557325.5
CDS CCA 72 bp AATGGGAGATGCCCAGAGACTGCAACAGGTGAAAGGTaGCCCCCAAGGCCCAGCCCGTCTCTATGTTGTTCA +
Preference number: 6 (lower is better)
Translates to: NGRCPETATGER*PPRPSPSLCCS
Trigger: TGAACAACATAGAGACGGGCTGGGCCTTGGGGGCCACCTTTCACCTGTTGCAGTCTCTGGGCATCTCCCATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000334696.11
CDS CCA 72 bp CCATCCGCTTGCAGGACAGGGTGTCAACATGGGCTTTaGGGATATCTCCAGCTTGGCCCATCACCTCAGTAC +
Preference number: 6 (lower is better)
Translates to: PSACRTGCQHGL*GYLQLGPSPQY
Trigger: GTACTGAGGTGATGGGCCAAGCTGGAGATATCCCCAAAGCCCATGTTGACACCCTGTCCTGCAAGCGGATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555829.5
CDS CCA 72 bp ACAGAGTCCATCCGCTTGCAGGACAGGGTGTCAACATaGGCTTTGGGGATATCTCCAGCTTGGCCCATCACC +
Preference number: 6 (lower is better)
Translates to: TESIRLQDRVST*ALGISPAWPIT
Trigger: GGTGATGGGCCAAGCTGGAGATATCCCCAAAGCCCATGTTGACACCCTGTCCTGCAAGCGGATGGACTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555829.5
CDS CAA 72 bp GCAGAGGCTGCTTGTGTCTGCCGGTTCCCTGAGTCCTaGCTTTCGCTGCAGGTTGCCTTTTGCTCTTTGCTC +
Preference number: 6 (lower is better)
Translates to: AEAACVCRFPES*LSLQVAFCSLL
Trigger: GAGCAAAGAGCAAAAGGCAACCTGCAGCGAAAGCAAGGACTCAGGGAACCGGCAGACACAAGCAGCCTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553284.5
CDS CAA 90 bp CTTGCAGGACAGGGTGTCAACATGGGCTTTGGGGATATCTCCAGCTaGGCCCATCACCTCAGTACGGCAGCCTGTAAGACTGTGCTGTCT +
Preference number: 6 (lower is better)
Translates to: LAGQGVNMGFGDISS*AHHLSTAACKTVLS
Trigger: AGACAGCACAGTCTTACAGGCTGCCGTACTGAGGTGATGGGCCAAGCTGGAGATATCCCCAAAGCCCATGTTGACACCCTGTCCTGCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555829.5
CDS CCA 72 bp AGGAAGATACCCTCAAACCAAGTCTGCTGGTTCCTGTaGGAGACAGCGCTGCAAACACAGGATACCACCAGC +
Preference number: 6 (lower is better)
Translates to: RKIPSNQVCWFL*ETALQTQDTTS
Trigger: GCTGGTGGTATCCTGTGTTTGCAGCGCTGTCTCCCACAGGAACCAGCAGACTTGGTTTGAGGGTATCTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334696.11
ENST00000553284.5
ENST00000556242.5
ENST00000557325.5
CDS CCA 72 bp AAGGTGTTGGCAAATGCAGGTCTCCAAGGAAGTACGTaGCCTCAATGGGAGATGCCCAGAGACTGCAACAGG +
Preference number: 6 (lower is better)
Translates to: KVLANAGLQGST*PQWEMPRDCNR
Trigger: CCTGTTGCAGTCTCTGGGCATCTCCCATTGAGGCCACGTACTTCCTTGGAGACCTGCATTTGCCAACACCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334696.11
CDS CCA 72 bp TCAAAGCCCACCTCCCCTTCTTGGTTGCCACCATACTaGTATTTCACACCCCCAAAGATCCACTCTGCTTCC +
Preference number: 6 (lower is better)
Translates to: SKPTSPSWLPPY*YFTPPKIHSAS
Trigger: GGAAGCAGAGTGGATCTTTGGGGGTGTGAAATACCAGTATGGTGGCAACCAAGAAGGGGAGGTGGGCTTTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334696.11
ENST00000557325.5
CDS CCA 72 bp AGAGAAAGCATAGAAGGAACCTCTCTGGACCTCCTCTaGCTGGTGAAGTTTTCCTCGTACCACCCTCAGCAC +
Preference number: 6 (lower is better)
Translates to: RESIEGTSLDLL*LVKFSSYHPQH
Trigger: GTGCTGAGGGTGGTACGAGGAAAACTTCACCAGCCAGAGGAGGTCCAGAGAGGTTCCTTCTATGCTTTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334696.11
ENST00000557325.5
CDS CAA 72 bp CCATTCTTTTCCCAAGATGTGGCTGGGTGGAGGCTTTaGTTGCAGAAGCAATCCTGCTCGCACACCTGCAGA +
Preference number: 6 (lower is better)
Translates to: PFFSQDVAGWRL*LQKQSCSHTCR
Trigger: TCTGCAGGTGTGCGAGCAGGATTGCTTCTGCAACAAAAGCCTCCACCCAGCCACATCTTGGGAAAAGAATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334696.11
ENST00000553284.5
ENST00000556242.5
ENST00000557325.5
CDS CAA 72 bp TCTGCCGGTTCCCTGAGTCCTTGCTTTCGCTGCAGGTaGCCTTTTGCTCTTTGCTCCTGTTTCAGCTCTTCT +
Preference number: 6 (lower is better)
Translates to: SAGSLSPCFRCR*PFALCSCFSSS
Trigger: AGAAGAGCTGAAACAGGAGCAAAGAGCAAAAGGCAACCTGCAGCGAAAGCAAGGACTCAGGGAACCGGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553284.5
CDS TCA 72 bp CGCTGGCTGCACTATCCCTTACAGAATCAGCAAGGGTaGAAAGCCAGGAAAGAGATGCAACCCAAAGGAGTA +
Preference number: 6 (lower is better)
Translates to: RWLHYPLQNQQG*KARKEMQPKGV
Trigger: TACTCCTTTGGGTTGCATCTCTTTCCTGGCTTTTCACCCTTGCTGATTCTGTAAGGGATAGTGCAGCCAGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554664.5
CDS GCA 72 bp AAAGAAGGACTAGAGCAACCTCTGAGGGTCCATTTCTaGTACCATTTCTCTGGTGGACACCTAACTCCTCCA +
Preference number: 6 (lower is better)
Translates to: KEGLEQPLRVHF*YHFSGGHLTPP
Trigger: TGGAGGAGTTAGGTGTCCACCAGAGAAATGGTAGCAGAAATGGACCCTCAGAGGTTGCTCTAGTCCTTCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556242.5
CDS CAA 90 bp CCTTTTCAGAGGTGTATTCGGGATTTCAGGAGTCGGGGAGGCAAGTaGAAGAGCTTCCAACTTTATGCAACTTTCAGGAAAGAAGGCTGC +
Preference number: 6 (lower is better)
Translates to: PFQRCIRDFRSRGGK*KSFQLYATFRKEGC
Trigger: GCAGCCTTCTTTCCTGAAAGTTGCATAAAGTTGGAAGCTCTTCAACTTGCCTCCCCGACTCCTGAAATCCCGAATACACCTCTGAAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554664.5
CDS TCA 72 bp GGTGTATTCGGGATTTCAGGAGTCGGGGAGGCAAGTTaGAGAGCTTCCAACTTTATGCAACTTTCAGGAAAG +
Preference number: 6 (lower is better)
Translates to: GVFGISGVGEAS*RASNFMQLSGK
Trigger: CTTTCCTGAAAGTTGCATAAAGTTGGAAGCTCTTCAACTTGCCTCCCCGACTCCTGAAATCCCGAATACACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554664.5