RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ENTPD3 (Homo sapiens)

Ensembl gene IDs: ENSG00000168032

Ensembl transcript IDs: ENST00000301825.8, ENST00000439533.5, ENST00000445129.1, ENST00000456402.5, ENST00000647765.1

Found 472 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GTGGAGGCACCACCTAAGTCCAGGGCACCCGTGGTTTCCACTCCATaGGGGTGCACCCACATGTGCCACAGGTTCTTCTCCAGGAAATTT +
Preference number: 1 (lower is better)
Translates to: VEAPPKSRAPVVSTP*GCTHMCHRFFSRKF
Trigger: AAATTTCCTGGAGAAGAACCTGTGGCACATGTGGGTGCACCCGCATGGAGTGGAAACCACGGGTGCCCTGGACTTAGGTGGTGCCTCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647765.1
3UTR CCA 90 bp CAAGGCTGCCGCTGTGAAGAAAGCGAGGGTGCCCACAAAGACAGGTaGTTCTATGGGCAGACGGATCAGAGGGCTTTCAGCTGGGATCTG +
Preference number: 1 (lower is better)
Translates to: QGCRCEESEGAHKDR*FYGQTDQRAFSWDL
Trigger: CAGATCCCAGCTGAAAGCCCTCTGATCCGTCTGCCCATAGAACCACCTGTCTTTGTGGGCACCCTCGCTTTCTTCACAGCGGCAGCCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647765.1
3UTR GCA 90 bp GCACCACCTAAGTCCAGGGCACCCGTGGTTTCCACTCCATGCGGGTaGACCCACATGTGCCACAGGTTCTTCTCCAGGAAATTTCCCATT +
Preference number: 1 (lower is better)
Translates to: APPKSRAPVVSTPCG*THMCHRFFSRKFPI
Trigger: AATGGGAAATTTCCTGGAGAAGAACCTGTGGCACATGTGGGTGCACCCGCATGGAGTGGAAACCACGGGTGCCCTGGACTTAGGTGGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647765.1
3UTR GCA 90 bp GGTGCCACCCAGGCTGACTCTAAGCAGCCATTGGACTCCAGGAGCTaGTTTGAAGGCTCAGTCAGAATCCACTGCATGGTCAAAGGCATG +
Preference number: 1 (lower is better)
Translates to: GATQADSKQPLDSRS*FEGSVRIHCMVKGM
Trigger: CATGCCTTTGACCATGCAGTGGATTCTGACTGAGCCTTCAAAGCAGCTCCTGGAGTCCAATGGCTGCTTAGAGTCAGCCTGGGTGGCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647765.1
3UTR TCA 90 bp TGCATGGTCAAAGGCATGCTCGGAGTGCCTCTTTCTTCTGGTTGCTaGACACAGGTATGCAAGAAATGCCAGACACAGCAAGGCTGCCGC +
Preference number: 1 (lower is better)
Translates to: CMVKGMLGVPLSSGC*TQVCKKCQTQQGCR
Trigger: GCGGCAGCCTTGCTGTGTCTGGCATTTCTTGCATACCTGTGTTCAGCAACCAGAAGAAAGAGGCACTCCGAGCATGCCTTTGACCATGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647765.1
3UTR GCA 90 bp CCATTGGACTCCAGGAGCTGCTTTGAAGGCTCAGTCAGAATCCACTaGATGGTCAAAGGCATGCTCGGAGTGCCTCTTTCTTCTGGTTGC +
Preference number: 1 (lower is better)
Translates to: PLDSRSCFEGSVRIH*MVKGMLGVPLSSGC
Trigger: GCAACCAGAAGAAAGAGGCACTCCGAGCATGCCTTTGACCATGCAGTGGATTCTGACTGAGCCTTCAAAGCAGCTCCTGGAGTCCAATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647765.1
3UTR TCA 90 bp TGTGTGTGTAGAGCGTGTATACGTAGCCATACAGGGACACCTGCATaGTGTCGCTGGTGTTCAGATCCATCTTCTCTCCTGCCACGAAGG +
Preference number: 1 (lower is better)
Translates to: CVCRACIRSHTGTPA*CRWCSDPSSLLPRR
Trigger: CCTTCGTGGCAGGAGAGAAGATGGATCTGAACACCAGCGACATCATGCAGGTGTCCCTGTATGGCTACGTATACACGCTCTACACACACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647765.1
3UTR CCA 90 bp TGGACTCCAGGAGCTGCTTTGAAGGCTCAGTCAGAATCCACTGCATaGTCAAAGGCATGCTCGGAGTGCCTCTTTCTTCTGGTTGCTGAA +
Preference number: 1 (lower is better)
Translates to: WTPGAALKAQSESTA*SKACSECLFLLVAE
Trigger: TTCAGCAACCAGAAGAAAGAGGCACTCCGAGCATGCCTTTGACCATGCAGTGGATTCTGACTGAGCCTTCAAAGCAGCTCCTGGAGTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647765.1
3UTR GCA 90 bp GCTGCTTTGAAGGCTCAGTCAGAATCCACTGCATGGTCAAAGGCATaGTCGGAGTGCCTCTTTCTTCTGGTTGCTGAACACAGGTATGCA +
Preference number: 1 (lower is better)
Translates to: AALKAQSESTAWSKA*SECLFLLVAEHRYA
Trigger: TGCATACCTGTGTTCAGCAACCAGAAGAAAGAGGCACTCCGAGCATGCCTTTGACCATGCAGTGGATTCTGACTGAGCCTTCAAAGCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647765.1
3UTR GCA 90 bp AAGGCTCAGTCAGAATCCACTGCATGGTCAAAGGCATGCTCGGAGTaGCTCTTTCTTCTGGTTGCTGAACACAGGTATGCAAGAAATGCC +
Preference number: 1 (lower is better)
Translates to: KAQSESTAWSKACSE*LFLLVAEHRYARNA
Trigger: GGCATTTCTTGCATACCTGTGTTCAGCAACCAGAAGAAAGAGGCACTCCGAGCATGCCTTTGACCATGCAGTGGATTCTGACTGAGCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647765.1
3UTR CCA 90 bp AATCCACTGCATGGTCAAAGGCATGCTCGGAGTGCCTCTTTCTTCTaGTTGCTGAACACAGGTATGCAAGAAATGCCAGACACAGCAAGG +
Preference number: 1 (lower is better)
Translates to: NPLHGQRHARSASFF*LLNTGMQEMPDTAR
Trigger: CCTTGCTGTGTCTGGCATTTCTTGCATACCTGTGTTCAGCAACCAGAAGAAAGAGGCACTCCGAGCATGCCTTTGACCATGCAGTGGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647765.1
3UTR GCA 90 bp GTAGTGAGGTCTCTGAAGAACAATATGCACAGAATAGCCAAGGGATaGCTCAAGAGGTGCTGTGGCAGAAATCAGTATTTGAGAGGCACG +
Preference number: 1 (lower is better)
Translates to: VVRSLKNNMHRIAKG*LKRCCGRNQYLRGT
Trigger: CGTGCCTCTCAAATACTGATTTCTGCCACAGCACCTCTTGAGGCATCCCTTGGCTATTCTGTGCATATTGTTCTTCAGAGACCTCACTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
3UTR CCA 90 bp CCCAGTTCCTTCAAAAGTGATGACATCATTGGGGTTATAACTTTCTaGCCTCTGGTCCACAGTGCACAGGCTATCAAATACATGGCCCAT +
Preference number: 1 (lower is better)
Translates to: PSSFKSDDIIGVITF*PLVHSAQAIKYMAH
Trigger: ATGGGCCATGTATTTGATAGCCTGTGCACTGTGGACCAGAGGCCAGAAAGTTATAACCCCAATGATGTCATCACTTTTGAAGGAACTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647765.1
3UTR TCA 90 bp TGCCCTGAAGGAAGTAAGTCTTCTCCCCCAGATACTATATTCTACTaGTCTGAGGGGGTTCACTGCTTACGAGATTGCTACAAGAAAGTC +
Preference number: 1 (lower is better)
Translates to: CPEGSKSSPPDTIFY*SEGVHCLRDCYKKV
Trigger: GACTTTCTTGTAGCAATCTCGTAAGCAGTGAACCCCCTCAGATCAGTAGAATATAGTATCTGGGGGAGAAGACTTACTTCCTTCAGGGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
3UTR TCA 90 bp CTAGGGATCAATGTGTTTTTATGGGAGGGCATAGCAATACAATGGTaGGATGAGGATGATGACAAACACACAGGTTGCAATCTAGTGACC +
Preference number: 1 (lower is better)
Translates to: LGINVFLWEGIAIQW*DEDDDKHTGCNLVT
Trigger: GGTCACTAGATTGCAACCTGTGTGTTTGTCATCATCCTCATCTCACCATTGTATTGCTATGCCCTCCCATAAAAACACATTGATCCCTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
3UTR TCA 90 bp TGTGAATTTGTAACCGTTCACAAACAAGTGGTAGATGTAGTTGGCTaGGAAGCAGTAAGAGCGGGCATATACCTCATCAAATTTGGGGAG +
Preference number: 1 (lower is better)
Translates to: CEFVTVHKQVVDVVG*EAVRAGIYLIKFGE
Trigger: CTCCCCAAATTTGATGAGGTATATGCCCGCTCTTACTGCTTCTCAGCCAACTACATCTACCACTTGTTTGTGAACGGTTACAAATTCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647765.1
3UTR TCA 90 bp GATAAACCCCATCAAAAGAACAGGTTTCTTGATCATGGCAAGCTTTaGAGTCAAATATGGAAGCCACCTTCTCCTTACACAGAGATGGGT +
Preference number: 1 (lower is better)
Translates to: DKPHQKNRFLDHGKL*SQIWKPPSPYTEMG
Trigger: ACCCATCTCTGTGTAAGGAGAAGGTGGCTTCCATATTTGACTTCAAAGCTTGCCATGATCAAGAAACCTGTTCTTTTGATGGGGTTTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647765.1
3UTR CCA 90 bp CCCAAAGTCAAGACCTATGACTACTATGCAGAGAGGTCTATGATCTaGGAAAGTAATTGGTTAGTAAATCATAGAGTAGGATGTTCGTTC +
Preference number: 1 (lower is better)
Translates to: PKVKTYDYYAERSMI*ESNWLVNHRVGCSF
Trigger: GAACGAACATCCTACTCTATGATTTACTAACCAATTACTTTCCCAGATCATAGACCTCTCTGCATAGTAGTCATAGGTCTTGACTTTGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
3UTR CCA 90 bp ACCTATGACTACTATGCAGAGAGGTCTATGATCTGGGAAAGTAATTaGTTAGTAAATCATAGAGTAGGATGTTCGTTCTATGACAACATC +
Preference number: 1 (lower is better)
Translates to: TYDYYAERSMIWESN*LVNHRVGCSFYDNI
Trigger: GATGTTGTCATAGAACGAACATCCTACTCTATGATTTACTAACCAATTACTTTCCCAGATCATAGACCTCTCTGCATAGTAGTCATAGGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
3UTR-3UTR TCA 90 bp GTGAGGTCTCTGAAGAACAATATGCACAGAATAGCCAAGGGATGCCTCAAGAGGGCCGTGGCTCCCAGGTaGATGGGGGTGGATCCGTGG +
Preference number: 2 (lower is better)
Translates to: VRSLKNNMHRIAKGCLKRAVAPR*MGVDPW
Trigger: CCACGGATCCACCCCCATTCACCTGGGAGCCACGGC...CCTCTTGAGGCATCCCTTGGCTATTCTGTGCATATTGTTCTTCAGAGACCTCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647765.1
3UTR-3UTR CCA 90 bp GAGGATGATGACAAACACACAGGTTGCAATCTAGTGACCAGAGCCCTAAGTGGGAGCGCATCCCAGCCGTaGCTCCCAGGTGAATGGGGG +
Preference number: 2 (lower is better)
Translates to: EDDDKHTGCNLVTRALSGSASQP*LPGEWG
Trigger: CCCCCATTCACCTGGGAGCCACGGCTGGGATGCGCT...CCCACTTAGGGCTCTGGTCACTAGATTGCAACCTGTGTGTTTGTCATCATCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647765.1
3UTR CAA 90 bp CCACCCAGGCTGACTCTAAGCAGCCATTGGACTCCAGGAGCTGCTTaGAAGGCTCAGTCAGAATCCACTGCATGGTCAAAGGCATGCTCG +
Preference number: 2 (lower is better)
Translates to: PPRLTLSSHWTPGAA*KAQSESTAWSKACS
Trigger: CGAGCATGCCTTTGACCATGCAGTGGATTCTGACTGAGCCTTCAAAGCAGCTCCTGGAGTCCAATGGCTGCTTAGAGTCAGCCTGGGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647765.1
3UTR-3UTR GCA 90 bp AAAGACAGGTGGTTCTATGGGCAGACGGATCAGAGGGCTTTCAGCTGGGATCTGGTGGTTTCCACTCCATaGGGGTGCACCCACATGTGC +
Preference number: 2 (lower is better)
Translates to: KDRWFYGQTDQRAFSWDLVVSTP*GCTHMC
Trigger: GCACATGTGGGTGCACCCGCATGGAGTGGAAACCAC...CAGATCCCAGCTGAAAGCCCTCTGATCCGTCTGCCCATAGAACCACCTGTCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647765.1
3UTR-3UTR GCA 90 bp GCATGGTCAAAGGCATGCTCGGAGTGCCTCTTTCTTCTGGTTGCTGAACACAGGAAGCCTGGCTGTGGCTaGTGCCCTGAAGGAAGTAAG +
Preference number: 2 (lower is better)
Translates to: AWSKACSECLFLLVAEHRKPGCG*CPEGSK
Trigger: CTTACTTCCTTCAGGGCAGCAGCCACAGCCAGGCTT...CCTGTGTTCAGCAACCAGAAGAAAGAGGCACTCCGAGCATGCCTTTGACCATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647765.1
3UTR-3UTR GCA 90 bp GCATGGTCAAAGGCATGCTCGGAGTGCCTCTTTCTTCTGGTTGCTGAACACAGGCAGACACAGCAAGGCTaGCGCTGTGAAGAAAGCGAG +
Preference number: 2 (lower is better)
Translates to: AWSKACSECLFLLVAEHRQTQQG*RCEESE
Trigger: CTCGCTTTCTTCACAGCGGCAGCCTTGCTGTGTCTG...CCTGTGTTCAGCAACCAGAAGAAAGAGGCACTCCGAGCATGCCTTTGACCATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647765.1
3UTR-3UTR GCA 90 bp GTCTCTGAAGAACAATATGCACAGAATAGCCAAGGGATGCCTCAAGAGGTGCTGCCACTTCACCTGCATTaGCTGGTGCCACCCAGGCTG +
Preference number: 2 (lower is better)
Translates to: VSEEQYAQNSQGMPQEVLPLHLH*LVPPRL
Trigger: CAGCCTGGGTGGCACCAGGCAATGCAGGTGAAGTGG...CAGCACCTCTTGAGGCATCCCTTGGCTATTCTGTGCATATTGTTCTTCAGAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
3UTR-3UTR GCA 90 bp GTCTCTGAAGAACAATATGCACAGAATAGCCAAGGGATGCCTCAAGAGGTGCTGGGCAGCCACTTCACCTaGATTGCCTGGTGCCACCCA +
Preference number: 2 (lower is better)
Translates to: VSEEQYAQNSQGMPQEVLGSHFT*IAWCHP
Trigger: TGGGTGGCACCAGGCAATGCAGGTGAAGTGGCTGCC...CAGCACCTCTTGAGGCATCCCTTGGCTATTCTGTGCATATTGTTCTTCAGAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
3UTR-3UTR GCA 90 bp TGGGTAGTGAGGTCTCTGAAGAACAATATGCACAGAATAGCCAAGGGATGCCTCGGCAGCCACTTCACCTaGATTGCCTGGTGCCACCCA +
Preference number: 2 (lower is better)
Translates to: WVVRSLKNNMHRIAKGCLGSHFT*IAWCHP
Trigger: TGGGTGGCACCAGGCAATGCAGGTGAAGTGGCTGCC...GAGGCATCCCTTGGCTATTCTGTGCATATTGTTCTTCAGAGACCTCACTACCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
3UTR-3UTR GCA 90 bp GTGAGGTCTCTGAAGAACAATATGCACAGAATAGCCAAGGGATGCCTCAAGAGGTCCACTCCATGCGGGTaGACCCACATGTGCCACAGG +
Preference number: 2 (lower is better)
Translates to: VRSLKNNMHRIAKGCLKRSTPCG*THMCHR
Trigger: CCTGTGGCACATGTGGGTGCACCCGCATGGAGTGGA...CCTCTTGAGGCATCCCTTGGCTATTCTGTGCATATTGTTCTTCAGAGACCTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647765.1
3UTR CAA 90 bp CCACTGCATGGTCAAAGGCATGCTCGGAGTGCCTCTTTCTTCTGGTaGCTGAACACAGGTATGCAAGAAATGCCAGACACAGCAAGGCTG +
Preference number: 2 (lower is better)
Translates to: PLHGQRHARSASFFW*LNTGMQEMPDTARL
Trigger: CAGCCTTGCTGTGTCTGGCATTTCTTGCATACCTGTGTTCAGCAACCAGAAGAAAGAGGCACTCCGAGCATGCCTTTGACCATGCAGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647765.1
3UTR-3UTR TCA 90 bp ACAAGTGGTAGATGTAGTTGGCTGAGAAGCAGTAAGAGCGGGCATATACCTCATCGGGATCTACCTGTATaGCAGAAGCCTGGCTGTGGC +
Preference number: 2 (lower is better)
Translates to: TSGRCSWLRSSKSGHIPHRDLPV*QKPGCG
Trigger: GCCACAGCCAGGCTTCTGTCATACAGGTAGATCCCG...ATGAGGTATATGCCCGCTCTTACTGCTTCTCAGCCAACTACATCTACCACTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647765.1
3UTR-3UTR GCA 90 bp GAAGGCTCAGTCAGAATCCACTGCATGGTCAAAGGCATGCTCGGAGTGCCTCTTTCTGAGGGGGTTCACTaGTTACGAGATTGCTACAAG +
Preference number: 2 (lower is better)
Translates to: EGSVRIHCMVKGMLGVPLSEGVH*LRDCYK
Trigger: CTTGTAGCAATCTCGTAAGCAGTGAACCCCCTCAGA...AAGAGGCACTCCGAGCATGCCTTTGACCATGCAGTGGATTCTGACTGAGCCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647765.1
3UTR-3UTR GCA 90 bp TGTGGCTGCTGCCCTGAAGGAAGTAAGTCTTCTCCCCCAGATACTATATTCTACAGAATAGCCAAGGGATaGCTCAAGAGGTGCTGTGGC +
Preference number: 2 (lower is better)
Translates to: CGCCPEGSKSSPPDTIFYRIAKG*LKRCCG
Trigger: GCCACAGCACCTCTTGAGGCATCCCTTGGCTATTCT...GTAGAATATAGTATCTGGGGGAGAAGACTTACTTCCTTCAGGGCAGCAGCCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
3UTR-3UTR GCA 90 bp GGCTCAGTCAGAATCCACTGCATGGTCAAAGGCATGCTCGGAGTGCCTCTTTCTTGCCCCTTGACTTTTTaGATACACTCCTCAAAGGCT +
Preference number: 2 (lower is better)
Translates to: GSVRIHCMVKGMLGVPLSCPLTF*IHSSKA
Trigger: AGCCTTTGAGGAGTGTATGCAAAAAGTCAAGGGGCA...AGAAAGAGGCACTCCGAGCATGCCTTTGACCATGCAGTGGATTCTGACTGAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647765.1
3UTR-3UTR GCA 90 bp GTCTCTGAAGAACAATATGCACAGAATAGCCAAGGGATGCCTCAAGAGGTGCTGCCATACAGGGACACCTaGATGATGTCGCTGGTGTTC +
Preference number: 2 (lower is better)
Translates to: VSEEQYAQNSQGMPQEVLPYRDT*MMSLVF
Trigger: GAACACCAGCGACATCATGCAGGTGTCCCTGTATGG...CAGCACCTCTTGAGGCATCCCTTGGCTATTCTGTGCATATTGTTCTTCAGAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647765.1
3UTR-3UTR CCA 90 bp ACAAGTGGTAGATGTAGTTGGCTGAGAAGCAGTAAGAGCGGGCATATACCTCATTCCGTGGAGGTGGGATaGAACCTGCCCCTTGACTTT +
Preference number: 2 (lower is better)
Translates to: TSGRCSWLRSSKSGHIPHSVEVG*NLPLDF
Trigger: AAAGTCAAGGGGCAGGTTCCATCCCACCTCCACGGA...ATGAGGTATATGCCCGCTCTTACTGCTTCTCAGCCAACTACATCTACCACTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647765.1
3UTR-3UTR CCA 90 bp CAGATACTATATTCTACTGATCTGAGGGGGTTCACTGCTTACGAGATTGCTACAATGGGGGTGGATCCGTaGAGGTGGGATGGAACCTGC +
Preference number: 2 (lower is better)
Translates to: QILYSTDLRGFTAYEIATMGVDP*RWDGTC
Trigger: GCAGGTTCCATCCCACCTCCACGGATCCACCCCCAT...TGTAGCAATCTCGTAAGCAGTGAACCCCCTCAGATCAGTAGAATATAGTATCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000647765.1
3UTR-3UTR CCA 90 bp CAGCCCTTTGCTAAGCAAAAGCCTAGCAAAGGCAGTAAAATCTGGAATGCAATAAGTCCAGGGCACCCGTaGTTTCCACTCCATGCGGGT +
Preference number: 2 (lower is better)
Translates to: QPFAKQKPSKGSKIWNAISPGHP*FPLHAG
Trigger: ACCCGCATGGAGTGGAAACCACGGGTGCCCTGGACT...TATTGCATTCCAGATTTTACTGCCTTTGCTAGGCTTTTGCTTAGCAAAGGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647765.1
3UTR-3UTR CCA 90 bp GTGAGGTCTCTGAAGAACAATATGCACAGAATAGCCAAGGGATGCCTCAAGAGGGCCACGAAGGATATTTaGGTGGAGGCACCACCTAAG +
Preference number: 2 (lower is better)
Translates to: VRSLKNNMHRIAKGCLKRATKDI*VEAPPK
Trigger: CTTAGGTGGTGCCTCCACCCAAATATCCTTCGTGGC...CCTCTTGAGGCATCCCTTGGCTATTCTGTGCATATTGTTCTTCAGAGACCTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647765.1
3UTR-3UTR CCA 90 bp GAGGATGATGACAAACACACAGGTTGCAATCTAGTGACCAGAGCCCTAAGTGGGGGGGTTATAACTTTCTaGCCTCTGGTCCACAGTGCA +
Preference number: 2 (lower is better)
Translates to: EDDDKHTGCNLVTRALSGGVITF*PLVHSA
Trigger: TGCACTGTGGACCAGAGGCCAGAAAGTTATAACCCC...CCCACTTAGGGCTCTGGTCACTAGATTGCAACCTGTGTGTTTGTCATCATCCTC
50% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000647765.1
3UTR-3UTR TCA 90 bp GGCTCAGTCAGAATCCACTGCATGGTCAAAGGCATGCTCGGAGTGCCTCTTTCTATGGAAACTGAGCCCTaGGGTCAATTCTTCAACATT +
Preference number: 2 (lower is better)
Translates to: GSVRIHCMVKGMLGVPLSMETEP*GQFFNI
Trigger: AATGTTGAAGAATTGACCTCAGGGCTCAGTTTCCAT...AGAAAGAGGCACTCCGAGCATGCCTTTGACCATGCAGTGGATTCTGACTGAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647765.1
3UTR-3UTR TCA 90 bp GTAGAGCGTGTATACGTAGCCATACAGGGACACCTGCATGATGTCGCTGGTGTTTGCCCAGAAATGATTTaGGCACCCCTAAAGTCAAAG +
Preference number: 2 (lower is better)
Translates to: VERVYVAIQGHLHDVAGVCPEMI*APLKSK
Trigger: CTTTGACTTTAGGGGTGCTCAAATCATTTCTGGGCA...AACACCAGCGACATCATGCAGGTGTCCCTGTATGGCTACGTATACACGCTCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647765.1
3UTR-3UTR TCA 90 bp CTCCCCCAGATACTATATTCTACTGATCTGAGGGGGTTCACTGCTTACGAGATTACAGGGACACCTGCATaGTGTCGCTGGTGTTCAGAT +
Preference number: 2 (lower is better)
Translates to: LPQILYSTDLRGFTAYEITGTPA*CRWCSD
Trigger: ATCTGAACACCAGCGACATCATGCAGGTGTCCCTGT...AATCTCGTAAGCAGTGAACCCCCTCAGATCAGTAGAATATAGTATCTGGGGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000647765.1
3UTR-3UTR GCA 90 bp GGGGAACTTAATATAAAGAGCCTGACCTTCGTGGCCTGTCTCTTCTCTGTTCCCGCTGCTGTTTCATTTTaGAACCTCAGCAAGCGCATC +
Preference number: 2 (lower is better)
Translates to: GELNIKSLTFVACLFSVPAAVSF*NLSKRI
Trigger: GATGCGCTTGCTGAGGTTGCAAAATGAAACAGCAGC...GGGAACAGAGAAGAGACAGGCCACGAAGGTCAGGCTCTTTATATTAAGTTCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647765.1
3UTR-3UTR CCA 90 bp TGGGTAGTGAGGTCTCTGAAGAACAATATGCACAGAATAGCCAAGGGATGCCTCACTCTAAGCAGCCATTaGACTCCAGGAGCTGCTTTG +
Preference number: 2 (lower is better)
Translates to: WVVRSLKNNMHRIAKGCLTLSSH*TPGAAL
Trigger: CAAAGCAGCTCCTGGAGTCCAATGGCTGCTTAGAGT...GAGGCATCCCTTGGCTATTCTGTGCATATTGTTCTTCAGAGACCTCACTACCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
3UTR-3UTR CCA 90 bp ACAAGTGGTAGATGTAGTTGGCTGAGAAGCAGTAAGAGCGGGCATATACCTCATACTGAGGGAGGGAAATaGAAACTGAGCCCTGAGGTC +
Preference number: 2 (lower is better)
Translates to: TSGRCSWLRSSKSGHIPHTEGGK*KLSPEV
Trigger: GACCTCAGGGCTCAGTTTCCATTTCCCTCCCTCAGT...ATGAGGTATATGCCCGCTCTTACTGCTTCTCAGCCAACTACATCTACCACTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647765.1
3UTR-3UTR GCA 90 bp TGTGGCTGCTGCCCTGAAGGAAGTAAGTCTTCTCCCCCAGATACTATATTCTACTCTGAGGGGGTTCACTaGTTACGAGATTGCTACAAG +
Preference number: 2 (lower is better)
Translates to: CGCCPEGSKSSPPDTIFYSEGVH*LRDCYK
Trigger: CTTGTAGCAATCTCGTAAGCAGTGAACCCCCTCAGA...GTAGAATATAGTATCTGGGGGAGAAGACTTACTTCCTTCAGGGCAGCAGCCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
3UTR-3UTR GCA 90 bp GTGAGGTCTCTGAAGAACAATATGCACAGAATAGCCAAGGGATGCCTCAAGAGGGACAAACACACAGGTTaGAATCTAGTGACCAGAGCC +
Preference number: 2 (lower is better)
Translates to: VRSLKNNMHRIAKGCLKRDKHTG*NLVTRA
Trigger: GGCTCTGGTCACTAGATTGCAACCTGTGTGTTTGTC...CCTCTTGAGGCATCCCTTGGCTATTCTGTGCATATTGTTCTTCAGAGACCTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
3UTR-3UTR GCA 90 bp GTCTCTGAAGAACAATATGCACAGAATAGCCAAGGGATGCCTCAAGAGGTGCTGGCCTCTGGTCCACAGTaGACAGGCTATCAAATACAT +
Preference number: 2 (lower is better)
Translates to: VSEEQYAQNSQGMPQEVLASGPQ*TGYQIH
Trigger: ATGTATTTGATAGCCTGTGCACTGTGGACCAGAGGC...CAGCACCTCTTGAGGCATCCCTTGGCTATTCTGTGCATATTGTTCTTCAGAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647765.1
3UTR-3UTR GCA 90 bp GAGGATGATGACAAACACACAGGTTGCAATCTAGTGACCAGAGCCCTAAGTGGGGAGACCAGGCTATGCTaGTATTCCCCACTTCTTTTT +
Preference number: 2 (lower is better)
Translates to: EDDDKHTGCNLVTRALSGETRLC*YSPLLF
Trigger: AAAAAGAAGTGGGGAATAGCAGCATAGCCTGGTCTC...CCCACTTAGGGCTCTGGTCACTAGATTGCAACCTGTGTGTTTGTCATCATCCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647765.1
3UTR-3UTR CCA 90 bp TGCGGGTGCACCCACATGTGCCACAGGTTCTTCTCCAGGAAATTTCCCATTAAACCTCAAGAGGTGCTGTaGCAGAAATCAGTATTTGAG +
Preference number: 2 (lower is better)
Translates to: CGCTHMCHRFFSRKFPIKPQEVL*QKSVFE
Trigger: CTCAAATACTGATTTCTGCCACAGCACCTCTTGAGG...TTTAATGGGAAATTTCCTGGAGAAGAACCTGTGGCACATGTGGGTGCACCCGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647765.1
3UTR-3UTR CCA 90 bp CTCCCCCAGATACTATATTCTACTGATCTGAGGGGGTTCACTGCTTACGAGATTACTCCTCAAAGGCTCTaGGGACATCTTGGGGGTTAT +
Preference number: 2 (lower is better)
Translates to: LPQILYSTDLRGFTAYEITPQRL*GHLGGY
Trigger: ATAACCCCCAAGATGTCCCCAGAGCCTTTGAGGAGT...AATCTCGTAAGCAGTGAACCCCCTCAGATCAGTAGAATATAGTATCTGGGGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000647765.1
3UTR-3UTR CCA 90 bp AAGACCTATGACTACTATGCAGAGAGGTCTATGATCTGGGAAAGTAATTGGTTAGTGGATCCGTGGAGGTaGGATGGAACCTGCCCCTTG +
Preference number: 2 (lower is better)
Translates to: KTYDYYAERSMIWESNWLVDPWR*DGTCPL
Trigger: CAAGGGGCAGGTTCCATCCCACCTCCACGGATCCAC...TAACCAATTACTTTCCCAGATCATAGACCTCTCTGCATAGTAGTCATAGGTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647765.1
3UTR-3UTR CCA 90 bp GTAGGATGTTCGTTCTATGACAACATCAAGTATACTTGTGGGAATGGTGACAAACCAGGTGAATGGGGGTaGATCCGTGGAGGTGGGATG +
Preference number: 2 (lower is better)
Translates to: VGCSFYDNIKYTCGNGDKPGEWG*IRGGGM
Trigger: CATCCCACCTCCACGGATCCACCCCCATTCACCTGG...TTTGTCACCATTCCCACAAGTATACTTGATGTTGTCATAGAACGAACATCCTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647765.1
3UTR-3UTR CCA 90 bp AAAGACAGGTGGTTCTATGGGCAGACGGATCAGAGGGCTTTCAGCTGGGATCTGTGGCCCTTTAATCTTTaGCTGATAAACCCCATCAAA +
Preference number: 2 (lower is better)
Translates to: KDRWFYGQTDQRAFSWDLWPFNL*LINPIK
Trigger: TTTGATGGGGTTTATCAGCCAAAGATTAAAGGGCCA...CAGATCCCAGCTGAAAGCCCTCTGATCCGTCTGCCCATAGAACCACCTGTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647765.1
3UTR-3UTR TCA 90 bp CTCCCCCAGATACTATATTCTACTGATCTGAGGGGGTTCACTGCTTACGAGATTGCAGAAATCAGTATTTaGGAGGCACGTGACCTAGGT +
Preference number: 2 (lower is better)
Translates to: LPQILYSTDLRGFTAYEIAEISI*EARDLG
Trigger: ACCTAGGTCACGTGCCTCTCAAATACTGATTTCTGC...AATCTCGTAAGCAGTGAACCCCCTCAGATCAGTAGAATATAGTATCTGGGGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
3UTR-3UTR TCA 90 bp ACAAGTGGTAGATGTAGTTGGCTGAGAAGCAGTAAGAGCGGGCATATACCTCATATGGAACCTGCCCCTTaGCTTTTTGCATACACTCCT +
Preference number: 2 (lower is better)
Translates to: TSGRCSWLRSSKSGHIPHMEPAP*LFAYTP
Trigger: AGGAGTGTATGCAAAAAGTCAAGGGGCAGGTTCCAT...ATGAGGTATATGCCCGCTCTTACTGCTTCTCAGCCAACTACATCTACCACTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647765.1
3UTR-3UTR GCA 90 bp ATCAAAAGAACAGGTTTCTTGATCATGGCAAGCTTTGAAGTCAAATATGGAAGCCCACTTCACCTGCATTaGCTGGTGCCACCCAGGCTG +
Preference number: 2 (lower is better)
Translates to: IKRTGFLIMASFEVKYGSPLHLH*LVPPRL
Trigger: CAGCCTGGGTGGCACCAGGCAATGCAGGTGAAGTGG...GCTTCCATATTTGACTTCAAAGCTTGCCATGATCAAGAAACCTGTTCTTTTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647765.1
3UTR-3UTR GCA 90 bp CTTCTCTGTTCCCCAATAGATCAGCATGTGGGTAGTGAGGTCTCTGAAGAACAAAGGTGGGATGGAACCTaGCCCTTGACTTTTTGCATA +
Preference number: 2 (lower is better)
Translates to: LLCSPIDQHVGSEVSEEQRWDGT*PLTFCI
Trigger: TATGCAAAAAGTCAAGGGGCAGGTTCCATCCCACCT...TTGTTCTTCAGAGACCTCACTACCCACATGCTGATCTATTGGGGAACAGAGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647765.1
3UTR-3UTR GCA 90 bp AAGACCTATGACTACTATGCAGAGAGGTCTATGATCTGGGAAAGTAATTGGTTAGGGTGCACCCACATGTaGCACAGGTTCTTCTCCAGG +
Preference number: 2 (lower is better)
Translates to: KTYDYYAERSMIWESNWLGCTHM*HRFFSR
Trigger: CCTGGAGAAGAACCTGTGGCACATGTGGGTGCACCC...TAACCAATTACTTTCCCAGATCATAGACCTCTCTGCATAGTAGTCATAGGTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647765.1
3UTR-3UTR CCA 90 bp CTCCCCCAGATACTATATTCTACTGATCTGAGGGGGTTCACTGCTTACGAGATTGACCAGAGCCCTAAGTaGGAATTCCACTTGGAGAAT +
Preference number: 2 (lower is better)
Translates to: LPQILYSTDLRGFTAYEIDQSPK*EFHLEN
Trigger: ATTCTCCAAGTGGAATTCCCACTTAGGGCTCTGGTC...AATCTCGTAAGCAGTGAACCCCCTCAGATCAGTAGAATATAGTATCTGGGGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
3UTR-3UTR CCA 90 bp ATCAAAAGAACAGGTTTCTTGATCATGGCAAGCTTTGAAGTCAAATATGGAAGCTGGCTCCCAGGTGAATaGGGGTGGATCCGTGGAGGT +
Preference number: 2 (lower is better)
Translates to: IKRTGFLIMASFEVKYGSWLPGE*GWIRGG
Trigger: ACCTCCACGGATCCACCCCCATTCACCTGGGAGCCA...GCTTCCATATTTGACTTCAAAGCTTGCCATGATCAAGAAACCTGTTCTTTTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647765.1
3UTR-3UTR CCA 90 bp GTCTCTGAAGAACAATATGCACAGAATAGCCAAGGGATGCCTCAAGAGGTGCTGAGTGCCTCTTTCTTCTaGTTGCTGAACACAGGTATG +
Preference number: 2 (lower is better)
Translates to: VSEEQYAQNSQGMPQEVLSASFF*LLNTGM
Trigger: CATACCTGTGTTCAGCAACCAGAAGAAAGAGGCACT...CAGCACCTCTTGAGGCATCCCTTGGCTATTCTGTGCATATTGTTCTTCAGAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647765.1
3UTR-3UTR TCA 90 bp GTGAGGTCTCTGAAGAACAATATGCACAGAATAGCCAAGGGATGCCTCAAGAGGATGCAGAGAGGTCTATaGTCTGGGAAAGTAATTGGT +
Preference number: 2 (lower is better)
Translates to: VRSLKNNMHRIAKGCLKRMQRGL*SGKVIG
Trigger: ACCAATTACTTTCCCAGATCATAGACCTCTCTGCAT...CCTCTTGAGGCATCCCTTGGCTATTCTGTGCATATTGTTCTTCAGAGACCTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
3UTR-3UTR GCA 90 bp ACAAGTGGTAGATGTAGTTGGCTGAGAAGCAGTAAGAGCGGGCATATACCTCATATCCATCTTCTCTCCTaGCACGAAGGATATTTGGGT +
Preference number: 2 (lower is better)
Translates to: TSGRCSWLRSSKSGHIPHIHLLS*HEGYLG
Trigger: ACCCAAATATCCTTCGTGGCAGGAGAGAAGATGGAT...ATGAGGTATATGCCCGCTCTTACTGCTTCTCAGCCAACTACATCTACCACTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647765.1
3UTR-3UTR CCA 90 bp GAAGGCTCAGTCAGAATCCACTGCATGGTCAAAGGCATGCTCGGAGTGCCTCTTATCAATGTGTTTTTATaGGAGGGCATAGCAATACAA +
Preference number: 2 (lower is better)
Translates to: EGSVRIHCMVKGMLGVPLINVFL*EGIAIQ
Trigger: TTGTATTGCTATGCCCTCCCATAAAAACACATTGAT...AAGAGGCACTCCGAGCATGCCTTTGACCATGCAGTGGATTCTGACTGAGCCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647765.1
3UTR-3UTR TCA 90 bp CAGATACTATATTCTACTGATCTGAGGGGGTTCACTGCTTACGAGATTGCTACAGTTAGTTGTATTTCCTaGAGGCAGCCACTTCACCTG +
Preference number: 2 (lower is better)
Translates to: QILYSTDLRGFTAYEIATVSCIS*RQPLHL
Trigger: CAGGTGAAGTGGCTGCCTTCAGGAAATACAACTAAC...TGTAGCAATCTCGTAAGCAGTGAACCCCCTCAGATCAGTAGAATATAGTATCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
3UTR-3UTR TCA 90 bp GTCTCTGAAGAACAATATGCACAGAATAGCCAAGGGATGCCTCAAGAGGTGCTGTATTTGAGAGGCACGTaGCCTAGGTGTTTGATTTTA +
Preference number: 2 (lower is better)
Translates to: VSEEQYAQNSQGMPQEVLYLRGT*PRCLIL
Trigger: TAAAATCAAACACCTAGGTCACGTGCCTCTCAAATA...CAGCACCTCTTGAGGCATCCCTTGGCTATTCTGTGCATATTGTTCTTCAGAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
3UTR-3UTR TCA 90 bp GAGGATGATGACAAACACACAGGTTGCAATCTAGTGACCAGAGCCCTAAGTGGGAGGATGTTCGTTCTATaGCAACATCAAGTATACTTG +
Preference number: 2 (lower is better)
Translates to: EDDDKHTGCNLVTRALSGRMFVL*QHQVYL
Trigger: CAAGTATACTTGATGTTGTCATAGAACGAACATCCT...CCCACTTAGGGCTCTGGTCACTAGATTGCAACCTGTGTGTTTGTCATCATCCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
3UTR-3UTR GCA 90 bp CAGATACTATATTCTACTGATCTGAGGGGGTTCACTGCTTACGAGATTGCTACAGGATGCCTCAAGAGGTaGTGTGGCAGAAATCAGTAT +
Preference number: 2 (lower is better)
Translates to: QILYSTDLRGFTAYEIATGCLKR*CGRNQY
Trigger: ATACTGATTTCTGCCACAGCACCTCTTGAGGCATCC...TGTAGCAATCTCGTAAGCAGTGAACCCCCTCAGATCAGTAGAATATAGTATCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
3UTR-3UTR TCA 90 bp GAGAAAGAGTACCATATGGAAGTTAACACACACACACCCCTTGCAAGTCAAAATGTTAGTTGTATTTCCTaGAGGCAGCCACTTCACCTG +
Preference number: 2 (lower is better)
Translates to: EKEYHMEVNTHTPLASQNVSCIS*RQPLHL
Trigger: CAGGTGAAGTGGCTGCCTTCAGGAAATACAACTAAC...ATTTTGACTTGCAAGGGGTGTGTGTGTGTTAACTTCCATATGGTACTCTTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
3UTR-3UTR TCA 90 bp CAGCCCTTTGCTAAGCAAAAGCCTAGCAAAGGCAGTAAAATCTGGAATGCAATAGATACTATATTCTACTaGTCTGAGGGGGTTCACTGC +
Preference number: 2 (lower is better)
Translates to: QPFAKQKPSKGSKIWNAIDTIFY*SEGVHC
Trigger: GCAGTGAACCCCCTCAGATCAGTAGAATATAGTATC...TATTGCATTCCAGATTTTACTGCCTTTGCTAGGCTTTTGCTTAGCAAAGGGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
3UTR-3UTR TCA 90 bp GTCTCTGAAGAACAATATGCACAGAATAGCCAAGGGATGCCTCAAGAGGTGCTGAGGATGTTCGTTCTATaGCAACATCAAGTATACTTG +
Preference number: 2 (lower is better)
Translates to: VSEEQYAQNSQGMPQEVLRMFVL*QHQVYL
Trigger: CAAGTATACTTGATGTTGTCATAGAACGAACATCCT...CAGCACCTCTTGAGGCATCCCTTGGCTATTCTGTGCATATTGTTCTTCAGAGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
3UTR-3UTR GCA 90 bp AATCATAGAGTAGGATGTTCGTTCTATGACAACATCAAGTATACTTGTGGGAATCCTGGCTGTGGCTGCTaGCCTGAAGGAAGTAAGTCT +
Preference number: 2 (lower is better)
Translates to: NHRVGCSFYDNIKYTCGNPGCGC*PEGSKS
Trigger: AGACTTACTTCCTTCAGGGCAGCAGCCACAGCCAGG...ATTCCCACAAGTATACTTGATGTTGTCATAGAACGAACATCCTACTCTATGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
3UTR-3UTR GCA 90 bp AATCATAGAGTAGGATGTTCGTTCTATGACAACATCAAGTATACTTGTGGGAATAAGCCTGGCTGTGGCTaGTGCCCTGAAGGAAGTAAG +
Preference number: 2 (lower is better)
Translates to: NHRVGCSFYDNIKYTCGNKPGCG*CPEGSK
Trigger: CTTACTTCCTTCAGGGCAGCAGCCACAGCCAGGCTT...ATTCCCACAAGTATACTTGATGTTGTCATAGAACGAACATCCTACTCTATGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
3UTR-3UTR CCA 90 bp GTAGGATGTTCGTTCTATGACAACATCAAGTATACTTGTGGGAATGGTGACAAAACTCTAAGCAGCCATTaGACTCCAGGAGCTGCTTTG +
Preference number: 2 (lower is better)
Translates to: VGCSFYDNIKYTCGNGDKTLSSH*TPGAAL
Trigger: CAAAGCAGCTCCTGGAGTCCAATGGCTGCTTAGAGT...TTTGTCACCATTCCCACAAGTATACTTGATGTTGTCATAGAACGAACATCCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
3UTR-3UTR CCA 90 bp AAGACCTATGACTACTATGCAGAGAGGTCTATGATCTGGGAAAGTAATTGGTTACGAAGGATATTTGGGTaGAGGCACCACCTAAGTCCA +
Preference number: 2 (lower is better)
Translates to: KTYDYYAERSMIWESNWLRRIFG*RHHLSP
Trigger: TGGACTTAGGTGGTGCCTCCACCCAAATATCCTTCG...TAACCAATTACTTTCCCAGATCATAGACCTCTCTGCATAGTAGTCATAGGTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647765.1
3UTR-3UTR TCA 90 bp CATAGAGTAGGATGTTCGTTCTATGACAACATCAAGTATACTTGTGGGAATGGTGAGGGAAATGGAAACTaGGCCCTGAGGTCAATTCTT +
Preference number: 2 (lower is better)
Translates to: HRVGCSFYDNIKYTCGNGEGNGN*ALRSIL
Trigger: AAGAATTGACCTCAGGGCTCAGTTTCCATTTCCCTC...ACCATTCCCACAAGTATACTTGATGTTGTCATAGAACGAACATCCTACTCTATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
3UTR-3UTR TCA 90 bp ACAAGTGGTAGATGTAGTTGGCTGAGAAGCAGTAAGAGCGGGCATATACCTCATATAGCAATACAATGGTaGGATGAGGATGATGACAAA +
Preference number: 2 (lower is better)
Translates to: TSGRCSWLRSSKSGHIPHIAIQW*DEDDDK
Trigger: TTTGTCATCATCCTCATCTCACCATTGTATTGCTAT...ATGAGGTATATGCCCGCTCTTACTGCTTCTCAGCCAACTACATCTACCACTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647765.1
3UTR-3UTR CCA 90 bp AAGACCTATGACTACTATGCAGAGAGGTCTATGATCTGGGAAAGTAATTGGTTAGACCAGAGCCCTAAGTaGGAATTCCACTTGGAGAAT +
Preference number: 2 (lower is better)
Translates to: KTYDYYAERSMIWESNWLDQSPK*EFHLEN
Trigger: ATTCTCCAAGTGGAATTCCCACTTAGGGCTCTGGTC...TAACCAATTACTTTCCCAGATCATAGACCTCTCTGCATAGTAGTCATAGGTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
3UTR-3UTR TCA 90 bp GTAGGATGTTCGTTCTATGACAACATCAAGTATACTTGTGGGAATGGTGACAAAGATACTATATTCTACTaGTCTGAGGGGGTTCACTGC +
Preference number: 2 (lower is better)
Translates to: VGCSFYDNIKYTCGNGDKDTIFY*SEGVHC
Trigger: GCAGTGAACCCCCTCAGATCAGTAGAATATAGTATC...TTTGTCACCATTCCCACAAGTATACTTGATGTTGTCATAGAACGAACATCCTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
3UTR-3UTR TCA 90 bp GAGAAAGAGTACCATATGGAAGTTAACACACACACACCCCTTGCAAGTCAAAATGATCATGGCAAGCTTTaGAGTCAAATATGGAAGCCA +
Preference number: 2 (lower is better)
Translates to: EKEYHMEVNTHTPLASQNDHGKL*SQIWKP
Trigger: TGGCTTCCATATTTGACTTCAAAGCTTGCCATGATC...ATTTTGACTTGCAAGGGGTGTGTGTGTGTTAACTTCCATATGGTACTCTTTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647765.1
3UTR-3UTR CCA 90 bp CATAGAGTAGGATGTTCGTTCTATGACAACATCAAGTATACTTGTGGGAATGGTAGGCTATCAAATACATaGCCCATGGTGAAGCTGATG +
Preference number: 2 (lower is better)
Translates to: HRVGCSFYDNIKYTCGNGRLSNT*PMVKLM
Trigger: CATCAGCTTCACCATGGGCCATGTATTTGATAGCCT...ACCATTCCCACAAGTATACTTGATGTTGTCATAGAACGAACATCCTACTCTATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647765.1
3UTR-3UTR CCA 90 bp ATCAAAAGAACAGGTTTCTTGATCATGGCAAGCTTTGAAGTCAAATATGGAAGCCTCCTTACACAGAGATaGGTCCCCAGTTCCTTCAAA +
Preference number: 2 (lower is better)
Translates to: IKRTGFLIMASFEVKYGSLLTQR*VPSSFK
Trigger: TTTGAAGGAACTGGGGACCCATCTCTGTGTAAGGAG...GCTTCCATATTTGACTTCAAAGCTTGCCATGATCAAGAAACCTGTTCTTTTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647765.1
3UTR-3UTR TCA 90 bp AATCATAGAGTAGGATGTTCGTTCTATGACAACATCAAGTATACTTGTGGGAATCAAAGGGCTGGGACTTaGAGTAGCTTTGGATGCTTT +
Preference number: 2 (lower is better)
Translates to: NHRVGCSFYDNIKYTCGNQRAGT*SSFGCF
Trigger: AAAGCATCCAAAGCTACTTCAAGTCCCAGCCCTTTG...ATTCCCACAAGTATACTTGATGTTGTCATAGAACGAACATCCTACTCTATGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647765.1
3UTR-3UTR CCA 90 bp CATAGAGTAGGATGTTCGTTCTATGACAACATCAAGTATACTTGTGGGAATGGTTGCAAAAGCCACAAATaGCCCTTTAATCTTTGGCTG +
Preference number: 2 (lower is better)
Translates to: HRVGCSFYDNIKYTCGNGCKSHK*PFNLWL
Trigger: CAGCCAAAGATTAAAGGGCCATTTGTGGCTTTTGCA...ACCATTCCCACAAGTATACTTGATGTTGTCATAGAACGAACATCCTACTCTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647765.1
3UTR-3UTR TCA 90 bp GTAGGATGTTCGTTCTATGACAACATCAAGTATACTTGTGGGAATGGTGACAAATATTTGAGAGGCACGTaGCCTAGGTGTTTGATTTTA +
Preference number: 2 (lower is better)
Translates to: VGCSFYDNIKYTCGNGDKYLRGT*PRCLIL
Trigger: TAAAATCAAACACCTAGGTCACGTGCCTCTCAAATA...TTTGTCACCATTCCCACAAGTATACTTGATGTTGTCATAGAACGAACATCCTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
3UTR-3UTR CCA 90 bp AATCATAGAGTAGGATGTTCGTTCTATGACAACATCAAGTATACTTGTGGGAATCCTCAAGAGGTGCTGTaGCAGAAATCAGTATTTGAG +
Preference number: 2 (lower is better)
Translates to: NHRVGCSFYDNIKYTCGNPQEVL*QKSVFE
Trigger: CTCAAATACTGATTTCTGCCACAGCACCTCTTGAGG...ATTCCCACAAGTATACTTGATGTTGTCATAGAACGAACATCCTACTCTATGATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
3UTR-3UTR TCA 90 bp GTAGGATGTTCGTTCTATGACAACATCAAGTATACTTGTGGGAATGGTGACAAAATAGCAATACAATGGTaGGATGAGGATGATGACAAA +
Preference number: 2 (lower is better)
Translates to: VGCSFYDNIKYTCGNGDKIAIQW*DEDDDK
Trigger: TTTGTCATCATCCTCATCTCACCATTGTATTGCTAT...TTTGTCACCATTCCCACAAGTATACTTGATGTTGTCATAGAACGAACATCCTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
3UTR-3UTR CCA 90 bp CATAGAGTAGGATGTTCGTTCTATGACAACATCAAGTATACTTGTGGGAATGGTAGAAAGAGTACCATATaGAAGTTAACACACACACAC +
Preference number: 2 (lower is better)
Translates to: HRVGCSFYDNIKYTCGNGRKSTI*KLTHTH
Trigger: GTGTGTGTGTGTTAACTTCCATATGGTACTCTTTCT...ACCATTCCCACAAGTATACTTGATGTTGTCATAGAACGAACATCCTACTCTATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
3UTR-3UTR CCA 90 bp AATCATAGAGTAGGATGTTCGTTCTATGACAACATCAAGTATACTTGTGGGAATGGTTATTTCCATAGCTaGAGATTCCAGAGCCTTTCA +
Preference number: 2 (lower is better)
Translates to: NHRVGCSFYDNIKYTCGNGYFHS*RFQSLS
Trigger: TGAAAGGCTCTGGAATCTCCAGCTATGGAAATAACC...ATTCCCACAAGTATACTTGATGTTGTCATAGAACGAACATCCTACTCTATGATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647765.1
3UTR-3UTR TCA 90 bp AATCATAGAGTAGGATGTTCGTTCTATGACAACATCAAGTATACTTGTGGGAATAAAGAACAGGTTTCTTaGTCATGGCAAGCTTTGAAG +
Preference number: 2 (lower is better)
Translates to: NHRVGCSFYDNIKYTCGNKEQVS*SWQALK
Trigger: CTTCAAAGCTTGCCATGATCAAGAAACCTGTTCTTT...ATTCCCACAAGTATACTTGATGTTGTCATAGAACGAACATCCTACTCTATGATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647765.1
3UTR GCA 72 bp CCACCTAAGTCCAGGGCACCCGTGGTTTCCACTCCATaGGGGTGCACCCACATGTGCCACAGGTTCTTCTCC +
Preference number: 3 (lower is better)
Translates to: PPKSRAPVVSTP*GCTHMCHRFFS
Trigger: GGAGAAGAACCTGTGGCACATGTGGGTGCACCCGCATGGAGTGGAAACCACGGGTGCCCTGGACTTAGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647765.1
3UTR GCA 72 bp AAGTCCAGGGCACCCGTGGTTTCCACTCCATGCGGGTaGACCCACATGTGCCACAGGTTCTTCTCCAGGAAA +
Preference number: 3 (lower is better)
Translates to: KSRAPVVSTPCG*THMCHRFFSRK
Trigger: TTTCCTGGAGAAGAACCTGTGGCACATGTGGGTGCACCCGCATGGAGTGGAAACCACGGGTGCCCTGGACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647765.1
3UTR CCA 72 bp CGCTGTGAAGAAAGCGAGGGTGCCCACAAAGACAGGTaGTTCTATGGGCAGACGGATCAGAGGGCTTTCAGC +
Preference number: 3 (lower is better)
Translates to: RCEESEGAHKDR*FYGQTDQRAFS
Trigger: GCTGAAAGCCCTCTGATCCGTCTGCCCATAGAACCACCTGTCTTTGTGGGCACCCTCGCTTTCTTCACAGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647765.1
3UTR CCA 72 bp AGAAAGCGAGGGTGCCCACAAAGACAGGTGGTTCTATaGGCAGACGGATCAGAGGGCTTTCAGCTGGGATCT +
Preference number: 3 (lower is better)
Translates to: RKRGCPQRQVVL*ADGSEGFQLGS
Trigger: AGATCCCAGCTGAAAGCCCTCTGATCCGTCTGCCCATAGAACCACCTGTCTTTGTGGGCACCCTCGCTTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647765.1
3UTR GCA 72 bp CAGGCTGACTCTAAGCAGCCATTGGACTCCAGGAGCTaGTTTGAAGGCTCAGTCAGAATCCACTGCATGGTC +
Preference number: 3 (lower is better)
Translates to: QADSKQPLDSRS*FEGSVRIHCMV
Trigger: GACCATGCAGTGGATTCTGACTGAGCCTTCAAAGCAGCTCCTGGAGTCCAATGGCTGCTTAGAGTCAGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647765.1
3UTR GCA 72 bp CCCGTGGTTTCCACTCCATGCGGGTGCACCCACATGTaGCACAGGTTCTTCTCCAGGAAATTTCCCATTAAA +
Preference number: 3 (lower is better)
Translates to: PVVSTPCGCTHM*HRFFSRKFPIK
Trigger: TTTAATGGGAAATTTCCTGGAGAAGAACCTGTGGCACATGTGGGTGCACCCGCATGGAGTGGAAACCACGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647765.1
3UTR CCA 72 bp GGAGCTGCTTTGAAGGCTCAGTCAGAATCCACTGCATaGTCAAAGGCATGCTCGGAGTGCCTCTTTCTTCTG +
Preference number: 3 (lower is better)
Translates to: GAALKAQSESTA*SKACSECLFLL
Trigger: CAGAAGAAAGAGGCACTCCGAGCATGCCTTTGACCATGCAGTGGATTCTGACTGAGCCTTCAAAGCAGCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647765.1
3UTR-3UTR CAA 90 bp AAAGACAGGTGGTTCTATGGGCAGACGGATCAGAGGGCTTTCAGCTGGGATCTGCTGCCCCTTGACTTTTaGCATACACTCCTCAAAGGC +
Preference number: 3 (lower is better)
Translates to: KDRWFYGQTDQRAFSWDLLPLDF*HTLLKG
Trigger: GCCTTTGAGGAGTGTATGCAAAAAGTCAAGGGGCAG...CAGATCCCAGCTGAAAGCCCTCTGATCCGTCTGCCCATAGAACCACCTGTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647765.1
3UTR-3UTR CAA 90 bp CACTCCATGCGGGTGCACCCACATGTGCCACAGGTTCTTCTCCAGGAAATTTCCAGCTGCTGTTTCATTTaGCAACCTCAGCAAGCGCAT +
Preference number: 3 (lower is better)
Translates to: HSMRVHPHVPQVLLQEISSCCFI*QPQQAH
Trigger: ATGCGCTTGCTGAGGTTGCAAAATGAAACAGCAGCT...GGAAATTTCCTGGAGAAGAACCTGTGGCACATGTGGGTGCACCCGCATGGAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647765.1
3UTR-3UTR CAA 90 bp GAGGATGATGACAAACACACAGGTTGCAATCTAGTGACCAGAGCCCTAAGTGGGGACTCTAAGCAGCCATaGGACTCCAGGAGCTGCTTT +
Preference number: 3 (lower is better)
Translates to: EDDDKHTGCNLVTRALSGDSKQP*DSRSCF
Trigger: AAAGCAGCTCCTGGAGTCCAATGGCTGCTTAGAGTC...CCCACTTAGGGCTCTGGTCACTAGATTGCAACCTGTGTGTTTGTCATCATCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
3UTR TCA 72 bp AGAGCGTGTATACGTAGCCATACAGGGACACCTGCATaGTGTCGCTGGTGTTCAGATCCATCTTCTCTCCTG +
Preference number: 3 (lower is better)
Translates to: RACIRSHTGTPA*CRWCSDPSSLL
Trigger: CAGGAGAGAAGATGGATCTGAACACCAGCGACATCATGCAGGTGTCCCTGTATGGCTACGTATACACGCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647765.1
3UTR GCA 72 bp TCAGAATCCACTGCATGGTCAAAGGCATGCTCGGAGTaGCTCTTTCTTCTGGTTGCTGAACACAGGTATGCA +
Preference number: 3 (lower is better)
Translates to: SESTAWSKACSE*LFLLVAEHRYA
Trigger: TGCATACCTGTGTTCAGCAACCAGAAGAAAGAGGCACTCCGAGCATGCCTTTGACCATGCAGTGGATTCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647765.1
3UTR CCA 72 bp CATGGTCAAAGGCATGCTCGGAGTGCCTCTTTCTTCTaGTTGCTGAACACAGGTATGCAAGAAATGCCAGAC +
Preference number: 3 (lower is better)
Translates to: HGQRHARSASFF*LLNTGMQEMPD
Trigger: GTCTGGCATTTCTTGCATACCTGTGTTCAGCAACCAGAAGAAAGAGGCACTCCGAGCATGCCTTTGACCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647765.1
3UTR-3UTR CAA 90 bp TGGGTAGTGAGGTCTCTGAAGAACAATATGCACAGAATAGCCAAGGGATGCCTCGATGGAACCTGCCCCTaGACTTTTTGCATACACTCC +
Preference number: 3 (lower is better)
Translates to: WVVRSLKNNMHRIAKGCLDGTCP*TFCIHS
Trigger: GGAGTGTATGCAAAAAGTCAAGGGGCAGGTTCCATC...GAGGCATCCCTTGGCTATTCTGTGCATATTGTTCTTCAGAGACCTCACTACCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647765.1
3UTR-3UTR CAA 90 bp GCATGGTCAAAGGCATGCTCGGAGTGCCTCTTTCTTCTGGTTGCTGAACACAGGTTGCCCAGAAATGATTaGAGCACCCCTAAAGTCAAA +
Preference number: 3 (lower is better)
Translates to: AWSKACSECLFLLVAEHRLPRND*STPKVK
Trigger: TTTGACTTTAGGGGTGCTCAAATCATTTCTGGGCAA...CCTGTGTTCAGCAACCAGAAGAAAGAGGCACTCCGAGCATGCCTTTGACCATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647765.1
3UTR-3UTR CAA 90 bp GTCTCTGAAGAACAATATGCACAGAATAGCCAAGGGATGCCTCAAGAGGTGCTGTGCTTAATGGGTATCTaGCCAGGAAGAATACTGAGG +
Preference number: 3 (lower is better)
Translates to: VSEEQYAQNSQGMPQEVLCLMGI*PGRILR
Trigger: CCTCAGTATTCTTCCTGGCAAGATACCCATTAAGCA...CAGCACCTCTTGAGGCATCCCTTGGCTATTCTGTGCATATTGTTCTTCAGAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
3UTR-3UTR CAA 90 bp GTGAGGTCTCTGAAGAACAATATGCACAGAATAGCCAAGGGATGCCTCAAGAGGTTTTTCAAAGTGTATTaGGGGCCAAGTCTCCTCTGT +
Preference number: 3 (lower is better)
Translates to: VRSLKNNMHRIAKGCLKRFFKVY*GPSLLC
Trigger: ACAGAGGAGACTTGGCCCCAAATACACTTTGAAAAA...CCTCTTGAGGCATCCCTTGGCTATTCTGTGCATATTGTTCTTCAGAGACCTCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647765.1
3UTR TCA 72 bp GGAAGTAAGTCTTCTCCCCCAGATACTATATTCTACTaGTCTGAGGGGGTTCACTGCTTACGAGATTGCTAC +
Preference number: 3 (lower is better)
Translates to: GSKSSPPDTIFY*SEGVHCLRDCY
Trigger: GTAGCAATCTCGTAAGCAGTGAACCCCCTCAGATCAGTAGAATATAGTATCTGGGGGAGAAGACTTACTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
3UTR GCA 72 bp GAAGTAGCTTTGGATGCTTTCAAGGACTTCATTAGCTaGTGTTTCATTTTGCAACCTCAGCAAGCGCATCCC +
Preference number: 3 (lower is better)
Translates to: EVALDAFKDFIS*CFILQPQQAHP
Trigger: GGGATGCGCTTGCTGAGGTTGCAAAATGAAACAGCAGCTAATGAAGTCCTTGAAAGCATCCAAAGCTACTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647765.1
3UTR-3UTR CAA 90 bp AAAAGCTACCTGAAAGATTTAAAGCACTGGCTGTGTAGTAGAATCCTGCAAAAGGGCTCTGGGGACATCTaGGGGGTTATTTCCATAGCT +
Preference number: 3 (lower is better)
Translates to: KSYLKDLKHWLCSRILQKGSGDI*GVISIA
Trigger: AGCTATGGAAATAACCCCCAAGATGTCCCCAGAGCC...CTTTTGCAGGATTCTACTACACAGCCAGTGCTTTAAATCTTTCAGGTAGCTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000647765.1
3UTR TCA 72 bp GTAACCGTTCACAAACAAGTGGTAGATGTAGTTGGCTaGGAAGCAGTAAGAGCGGGCATATACCTCATCAAA +
Preference number: 3 (lower is better)
Translates to: VTVHKQVVDVVG*EAVRAGIYLIK
Trigger: TTTGATGAGGTATATGCCCGCTCTTACTGCTTCTCAGCCAACTACATCTACCACTTGTTTGTGAACGGTTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647765.1
3UTR GCA 72 bp TCTCTGAAGAACAATATGCACAGAATAGCCAAGGGATaGCTCAAGAGGTGCTGTGGCAGAAATCAGTATTTG +
Preference number: 3 (lower is better)
Translates to: SLKNNMHRIAKG*LKRCCGRNQYL
Trigger: CAAATACTGATTTCTGCCACAGCACCTCTTGAGGCATCCCTTGGCTATTCTGTGCATATTGTTCTTCAGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
3UTR-3UTR CAA 90 bp CAGCCCTTTGCTAAGCAAAAGCCTAGCAAAGGCAGTAAAATCTGGAATGCAATATGCTTAATGGGTATCTaGCCAGGAAGAATACTGAGG +
Preference number: 3 (lower is better)
Translates to: QPFAKQKPSKGSKIWNAICLMGI*PGRILR
Trigger: CCTCAGTATTCTTCCTGGCAAGATACCCATTAAGCA...TATTGCATTCCAGATTTTACTGCCTTTGCTAGGCTTTTGCTTAGCAAAGGGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
3UTR-3UTR CAA 90 bp GTCTCTGAAGAACAATATGCACAGAATAGCCAAGGGATGCCTCAAGAGGTGCTGAAAAGAACAGGTTTCTaGATCATGGCAAGCTTTGAA +
Preference number: 3 (lower is better)
Translates to: VSEEQYAQNSQGMPQEVLKRTGF*IMASFE
Trigger: TTCAAAGCTTGCCATGATCAAGAAACCTGTTCTTTT...CAGCACCTCTTGAGGCATCCCTTGGCTATTCTGTGCATATTGTTCTTCAGAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647765.1
3UTR CCA 72 bp AATCTAGTGACCAGAGCCCTAAGTGGGAATTCCACTTaGAGAATGGTCTATAGTTTTCTGGGAGACCTTTTT +
Preference number: 3 (lower is better)
Translates to: NLVTRALSGNST*RMVYSFLGDLF
Trigger: AAAAAGGTCTCCCAGAAAACTATAGACCATTCTCCAAGTGGAATTCCCACTTAGGGCTCTGGTCACTAGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
3UTR CCA 72 bp ATATCACCTAGGGTCCTTAGGAGAAAGAGTACCATATaGAAGTTAACACACACACACCCCTTGCAAGTCAAA +
Preference number: 3 (lower is better)
Translates to: ISPRVLRRKSTI*KLTHTHPLQVK
Trigger: TTTGACTTGCAAGGGGTGTGTGTGTGTTAACTTCCATATGGTACTCTTTCTCCTAAGGACCCTAGGTGATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
3UTR CCA 72 bp TTCAAAAGTGATGACATCATTGGGGTTATAACTTTCTaGCCTCTGGTCCACAGTGCACAGGCTATCAAATAC +
Preference number: 3 (lower is better)
Translates to: FKSDDIIGVITF*PLVHSAQAIKY
Trigger: GTATTTGATAGCCTGTGCACTGTGGACCAGAGGCCAGAAAGTTATAACCCCAATGATGTCATCACTTTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647765.1
3UTR CCA 72 bp TGTCCAGGGAAAAGCTACCTGAAAGATTTAAAGCACTaGCTGTGTAGTAGAATCCTGCAAAAGCCACAAATG +
Preference number: 3 (lower is better)
Translates to: CPGKSYLKDLKH*LCSRILQKPQM
Trigger: CATTTGTGGCTTTTGCAGGATTCTACTACACAGCCAGTGCTTTAAATCTTTCAGGTAGCTTTTCCCTGGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647765.1
3UTR-3UTR CAA 90 bp GTAGGATGTTCGTTCTATGACAACATCAAGTATACTTGTGGGAATGGTGACAAATGGAAAGTCAGCCCTTaGCTAAGCAAAAGCCTAGCA +
Preference number: 3 (lower is better)
Translates to: VGCSFYDNIKYTCGNGDKWKVSP*LSKSLA
Trigger: TGCTAGGCTTTTGCTTAGCAAAGGGCTGACTTTCCA...TTTGTCACCATTCCCACAAGTATACTTGATGTTGTCATAGAACGAACATCCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
3UTR TCA 72 bp AGGTGCTGTGGCAGAAATCAGTATTTGAGAGGCACGTaGCCTAGGTGTTTGATTTTAGTTAGTTGTATTTCC +
Preference number: 3 (lower is better)
Translates to: RCCGRNQYLRGT*PRCLILVSCIS
Trigger: GGAAATACAACTAACTAAAATCAAACACCTAGGTCACGTGCCTCTCAAATACTGATTTCTGCCACAGCACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
3UTR TCA 72 bp AAACTGAGCCCTGAGGTCAATTCTTCAACATTAAACTaGTACCTTCTCAACTTACTCTTCCTCTGGGGAACT +
Preference number: 3 (lower is better)
Translates to: KLSPEVNSSTLN*YLLNLLFLWGT
Trigger: AGTTCCCCAGAGGAAGAGTAAGTTGAGAAGGTATCAGTTTAATGTTGAAGAATTGACCTCAGGGCTCAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
3UTR-3UTR CAA 90 bp AGAACAGGTTTCTTGATCATGGCAAGCTTTGAAGTCAAATATGGAAGCCACCTTATATACCCCTTCTTCTaGCCCAGAAATGATTTGAGC +
Preference number: 3 (lower is better)
Translates to: RTGFLIMASFEVKYGSHLIYPFF*PRNDLS
Trigger: GCTCAAATCATTTCTGGGCAAGAAGAAGGGGTATAT...AAGGTGGCTTCCATATTTGACTTCAAAGCTTGCCATGATCAAGAAACCTGTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647765.1
3UTR TCA 72 bp AATGTGTTTTTATGGGAGGGCATAGCAATACAATGGTaGGATGAGGATGATGACAAACACACAGGTTGCAAT +
Preference number: 3 (lower is better)
Translates to: NVFLWEGIAIQW*DEDDDKHTGCN
Trigger: ATTGCAACCTGTGTGTTTGTCATCATCCTCATCTCACCATTGTATTGCTATGCCCTCCCATAAAAACACATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
3UTR TCA 72 bp CATCAAAAGAACAGGTTTCTTGATCATGGCAAGCTTTaGAGTCAAATATGGAAGCCACCTTCTCCTTACACA +
Preference number: 3 (lower is better)
Translates to: HQKNRFLDHGKL*SQIWKPPSPYT
Trigger: TGTGTAAGGAGAAGGTGGCTTCCATATTTGACTTCAAAGCTTGCCATGATCAAGAAACCTGTTCTTTTGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647765.1
3UTR TCA 72 bp CTTTTTCAAAGTGTATTTGGGGCCAAGTCTCCTCTGTaGATTTGTAACCGTTCACAAACAAGTGGTAGATGT +
Preference number: 3 (lower is better)
Translates to: LFQSVFGAKSPL*ICNRSQTSGRC
Trigger: ACATCTACCACTTGTTTGTGAACGGTTACAAATTCACAGAGGAGACTTGGCCCCAAATACACTTTGAAAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647765.1
3UTR-3UTR CAA 90 bp AGAACAGGTTTCTTGATCATGGCAAGCTTTGAAGTCAAATATGGAAGCCACCTTTGGAATGCAATAATCTaGCTAGGGATCAATGTGTTT +
Preference number: 3 (lower is better)
Translates to: RTGFLIMASFEVKYGSHLWNAII*LGINVF
Trigger: AAACACATTGATCCCTAGCAAGATTATTGCATTCCA...AAGGTGGCTTCCATATTTGACTTCAAAGCTTGCCATGATCAAGAAACCTGTTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647765.1
3UTR-3UTR CAA 90 bp AAGACCTATGACTACTATGCAGAGAGGTCTATGATCTGGGAAAGTAATTGGTTATGGAATGCAATAATCTaGCTAGGGATCAATGTGTTT +
Preference number: 3 (lower is better)
Translates to: KTYDYYAERSMIWESNWLWNAII*LGINVF
Trigger: AAACACATTGATCCCTAGCAAGATTATTGCATTCCA...TAACCAATTACTTTCCCAGATCATAGACCTCTCTGCATAGTAGTCATAGGTCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
3UTR CCA 72 bp TACTATGCAGAGAGGTCTATGATCTGGGAAAGTAATTaGTTAGTAAATCATAGAGTAGGATGTTCGTTCTAT +
Preference number: 3 (lower is better)
Translates to: YYAERSMIWESN*LVNHRVGCSFY
Trigger: ATAGAACGAACATCCTACTCTATGATTTACTAACCAATTACTTTCCCAGATCATAGACCTCTCTGCATAGTA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR TCA 90 bp GTAGAGCGTGTATACGTAGCCATACAGGGACACCTGCATGATGTCGCTGGTGTTGCCGTGGCTCCCAGGTaGATGGGGGTGGATCCGTGG +
Preference number: 4 (lower is better)
Translates to: VERVYVAIQGHLHDVAGVAVAPR*MGVDPW
Trigger: CCACGGATCCACCCCCATTCACCTGGGAGCCACGGC...AACACCAGCGACATCATGCAGGTGTCCCTGTATGGCTACGTATACACGCTCTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647765.1
CDS-3UTR CCA 90 bp GTAGAGCGTGTATACGTAGCCATACAGGGACACCTGCATGATGTCGCTGGTGTTAGCGCATCCCAGCCGTaGCTCCCAGGTGAATGGGGG +
Preference number: 4 (lower is better)
Translates to: VERVYVAIQGHLHDVAGVSASQP*LPGEWG
Trigger: CCCCCATTCACCTGGGAGCCACGGCTGGGATGCGCT...AACACCAGCGACATCATGCAGGTGTCCCTGTATGGCTACGTATACACGCTCTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647765.1
CDS-3UTR CCA 90 bp CACTCCATGCGGGTGCACCCACATGTGCCACAGGTTCTTCTCCAGGAAATTTCCAGTCCAGGGCACCCGTaGTTTCCACTCCATGCGGGT +
Preference number: 4 (lower is better)
Translates to: HSMRVHPHVPQVLLQEISSPGHP*FPLHAG
Trigger: ACCCGCATGGAGTGGAAACCACGGGTGCCCTGGACT...GGAAATTTCCTGGAGAAGAACCTGTGGCACATGTGGGTGCACCCGCATGGAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647765.1
CDS-3UTR TCA 90 bp CACTCCATGCGGGTGCACCCACATGTGCCACAGGTTCTTCTCCAGGAAATTTCCCGGGATCTACCTGTATaGCAGAAGCCTGGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: HSMRVHPHVPQVLLQEISRDLPV*QKPGCG
Trigger: GCCACAGCCAGGCTTCTGTCATACAGGTAGATCCCG...GGAAATTTCCTGGAGAAGAACCTGTGGCACATGTGGGTGCACCCGCATGGAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647765.1
CDS-3UTR GCA 90 bp CGTGGCCTGTCTCTTCTCTGTTCCCCAATAGATCAGCATGTGGGTAGTGAGGTCGCCTTGAGGCCTGCTTaGTCACATGGTTGGCGGGTC +
Preference number: 4 (lower is better)
Translates to: RGLSLLCSPIDQHVGSEVALRPA*SHGWRV
Trigger: GACCCGCCAACCATGTGAGCAAGCAGGCCTCAAGGC...GACCTCACTACCCACATGCTGATCTATTGGGGAACAGAGAAGAGACAGGCCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR GCA 90 bp CGTGGCCTGTCTCTTCTCTGTTCCCCAATAGATCAGCATGTGGGTAGTGAGGTCCCACTTCACCTGCATTaGCTGGTGCCACCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: RGLSLLCSPIDQHVGSEVPLHLH*LVPPRL
Trigger: CAGCCTGGGTGGCACCAGGCAATGCAGGTGAAGTGG...GACCTCACTACCCACATGCTGATCTATTGGGGAACAGAGAAGAGACAGGCCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR GCA 90 bp GGTGTTCAGATCCATCTTCTCTCCTGCCACGAAGGATATTTGGGTGGAGGCACCGGCAGCCACTTCACCTaGATTGCCTGGTGCCACCCA +
Preference number: 4 (lower is better)
Translates to: GVQIHLLSCHEGYLGGGTGSHFT*IAWCHP
Trigger: TGGGTGGCACCAGGCAATGCAGGTGAAGTGGCTGCC...GGTGCCTCCACCCAAATATCCTTCGTGGCAGGAGAGAAGATGGATCTGAACACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647765.1
CDS-3UTR TCA 90 bp CGTGGCCTGTCTCTTCTCTGTTCCCCAATAGATCAGCATGTGGGTAGTGAGGTCCGGGATCTACCTGTATaGCAGAAGCCTGGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: RGLSLLCSPIDQHVGSEVRDLPV*QKPGCG
Trigger: GCCACAGCCAGGCTTCTGTCATACAGGTAGATCCCG...GACCTCACTACCCACATGCTGATCTATTGGGGAACAGAGAAGAGACAGGCCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR GCA 90 bp CGTGGCCTGTCTCTTCTCTGTTCCCCAATAGATCAGCATGTGGGTAGTGAGGTCGGGTGCACCCACATGTaGCACAGGTTCTTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: RGLSLLCSPIDQHVGSEVGCTHM*HRFFSR
Trigger: CCTGGAGAAGAACCTGTGGCACATGTGGGTGCACCC...GACCTCACTACCCACATGCTGATCTATTGGGGAACAGAGAAGAGACAGGCCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR TCA 90 bp GGTGTTCAGATCCATCTTCTCTCCTGCCACGAAGGATATTTGGGTGGAGGCACCTCTGGTTGGTCAGGCTaGGCATGTAGCCAAGAGACC +
Preference number: 4 (lower is better)
Translates to: GVQIHLLSCHEGYLGGGTSGWSG*ACSQET
Trigger: GGTCTCTTGGCTACATGCTCAGCCTGACCAACCAGA...GGTGCCTCCACCCAAATATCCTTCGTGGCAGGAGAGAAGATGGATCTGAACACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647765.1
CDS-3UTR TCA 90 bp GTCTCTGAAGAACAATATGCACAGAATAGCCAAGGGATGCCTCAAGAGGTGCTGGCAAGGCTGCCGCTGTaGAGAAAGCGAGGGTGCCCA +
Preference number: 4 (lower is better)
Translates to: VSEEQYAQNSQGMPQEVLARLPL*RKRGCP
Trigger: TGGGCACCCTCGCTTTCTTCACAGCGGCAGCCTTGC...CAGCACCTCTTGAGGCATCCCTTGGCTATTCTGTGCATATTGTTCTTCAGAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR CCA 90 bp GGCTCAGTCAGAATCCACTGCATGGTCAAAGGCATGCTCGGAGTGCCTCTTTCTGCTTGCTCACATGGTTaGCGGGTCAGCACAGTGAAC +
Preference number: 4 (lower is better)
Translates to: GSVRIHCMVKGMLGVPLSACSHG*RVSTVN
Trigger: GTTCACTGTGCTGACCCGCCAACCATGTGAGCAAGC...AGAAAGAGGCACTCCGAGCATGCCTTTGACCATGCAGTGGATTCTGACTGAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647765.1
CDS-3UTR CCA 90 bp GGTGTTCAGATCCATCTTCTCTCCTGCCACGAAGGATATTTGGGTGGAGGCACCTCCGTGGAGGTGGGATaGAACCTGCCCCTTGACTTT +
Preference number: 4 (lower is better)
Translates to: GVQIHLLSCHEGYLGGGTSVEVG*NLPLDF
Trigger: AAAGTCAAGGGGCAGGTTCCATCCCACCTCCACGGA...GGTGCCTCCACCCAAATATCCTTCGTGGCAGGAGAGAAGATGGATCTGAACACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647765.1
CDS-3UTR CCA 90 bp GAGGATGATGACAAACACACAGGTTGCAATCTAGTGACCAGAGCCCTAAGTGGGGTGGATCCGTGGAGGTaGGATGGAACCTGCCCCTTG +
Preference number: 4 (lower is better)
Translates to: EDDDKHTGCNLVTRALSGVDPWR*DGTCPL
Trigger: CAAGGGGCAGGTTCCATCCCACCTCCACGGATCCAC...CCCACTTAGGGCTCTGGTCACTAGATTGCAACCTGTGTGTTTGTCATCATCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR CCA 90 bp GAAGGCTCAGTCAGAATCCACTGCATGGTCAAAGGCATGCTCGGAGTGCCTCTTCAGAGGGCTTTCAGCTaGGATCTGGTTGGTCAGGCT +
Preference number: 4 (lower is better)
Translates to: EGSVRIHCMVKGMLGVPLQRAFS*DLVGQA
Trigger: AGCCTGACCAACCAGATCCCAGCTGAAAGCCCTCTG...AAGAGGCACTCCGAGCATGCCTTTGACCATGCAGTGGATTCTGACTGAGCCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647765.1
CDS-3UTR CCA 90 bp GTAGAGCGTGTATACGTAGCCATACAGGGACACCTGCATGATGTCGCTGGTGTTCCTGGCCTTCAGTCCTaGAGGGAGGACCTCTTGCTT +
Preference number: 4 (lower is better)
Translates to: VERVYVAIQGHLHDVAGVPGLQS*REDLLL
Trigger: AAGCAAGAGGTCCTCCCTCCAGGACTGAAGGCCAGG...AACACCAGCGACATCATGCAGGTGTCCCTGTATGGCTACGTATACACGCTCTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647765.1
CDS-3UTR TCA 90 bp GGCTCAGTCAGAATCCACTGCATGGTCAAAGGCATGCTCGGAGTGCCTCTTTCTGTAGATGTAGTTGGCTaGGAAGCAGTAAGAGCGGGC +
Preference number: 4 (lower is better)
Translates to: GSVRIHCMVKGMLGVPLSVDVVG*EAVRAG
Trigger: GCCCGCTCTTACTGCTTCTCAGCCAACTACATCTAC...AGAAAGAGGCACTCCGAGCATGCCTTTGACCATGCAGTGGATTCTGACTGAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647765.1
CDS-3UTR GCA 90 bp TGGGTAGTGAGGTCTCTGAAGAACAATATGCACAGAATAGCCAAGGGATGCCTCTCCACTCCATGCGGGTaGACCCACATGTGCCACAGG +
Preference number: 4 (lower is better)
Translates to: WVVRSLKNNMHRIAKGCLSTPCG*THMCHR
Trigger: CCTGTGGCACATGTGGGTGCACCCGCATGGAGTGGA...GAGGCATCCCTTGGCTATTCTGTGCATATTGTTCTTCAGAGACCTCACTACCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR CCA 90 bp GTCTCTGAAGAACAATATGCACAGAATAGCCAAGGGATGCCTCAAGAGGTGCTGCCAGGTGAATGGGGGTaGATCCGTGGAGGTGGGATG +
Preference number: 4 (lower is better)
Translates to: VSEEQYAQNSQGMPQEVLPGEWG*IRGGGM
Trigger: CATCCCACCTCCACGGATCCACCCCCATTCACCTGG...CAGCACCTCTTGAGGCATCCCTTGGCTATTCTGTGCATATTGTTCTTCAGAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR CCA 90 bp CGTGGCCTGTCTCTTCTCTGTTCCCCAATAGATCAGCATGTGGGTAGTGAGGTCACTGAGGGAGGGAAATaGAAACTGAGCCCTGAGGTC +
Preference number: 4 (lower is better)
Translates to: RGLSLLCSPIDQHVGSEVTEGGK*KLSPEV
Trigger: GACCTCAGGGCTCAGTTTCCATTTCCCTCCCTCAGT...GACCTCACTACCCACATGCTGATCTATTGGGGAACAGAGAAGAGACAGGCCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR TCA 90 bp GTGAGGTCTCTGAAGAACAATATGCACAGAATAGCCAAGGGATGCCTCAAGAGGTTCGGTAGAGGGCCTTaGGGCCTGCTTGCTCACATG +
Preference number: 4 (lower is better)
Translates to: VRSLKNNMHRIAKGCLKRFGRGP*GLLAHM
Trigger: CATGTGAGCAAGCAGGCCTCAAGGCCCTCTACCGAA...CCTCTTGAGGCATCCCTTGGCTATTCTGTGCATATTGTTCTTCAGAGACCTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR TCA 90 bp GCTGAAGCTGGTATTGAACAGGCTGACTCCAGACATCCTTCAGGCTTCATATCATTCGGTAGAGGGCCTTaGGGCCTGCTTGCTCACATG +
Preference number: 4 (lower is better)
Translates to: AEAGIEQADSRHPSGFISFGRGP*GLLAHM
Trigger: CATGTGAGCAAGCAGGCCTCAAGGCCCTCTACCGAA...TGATATGAAGCCTGAAGGATGTCTGGAGTCAGCCTGTTCAATACCAGCTTCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445129.1
CDS-3UTR TCA 90 bp AATCTAATTATTGCTGAAGCTGGTATTGAACAGGCTGACTCCAGACATCCTTCAGCCGTGGCTCCCAGGTaGATGGGGGTGGATCCGTGG +
Preference number: 4 (lower is better)
Translates to: NLIIAEAGIEQADSRHPSAVAPR*MGVDPW
Trigger: CCACGGATCCACCCCCATTCACCTGGGAGCCACGGC...TGAAGGATGTCTGGAGTCAGCCTGTTCAATACCAGCTTCAGCAATAATTAGATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445129.1
CDS-3UTR TCA 90 bp GGGGAACTTAATATAAAGAGCCTGACCTTCGTGGCCTGTCTCTTCTCTGTTCCCTCCAGGTGCTGGAGTTaGAGGTGTCCAGGGAAAAGC +
Preference number: 4 (lower is better)
Translates to: GELNIKSLTFVACLFSVPSRCWS*RCPGKS
Trigger: GCTTTTCCCTGGACACCTTCAACTCCAGCACCTGGA...GGGAACAGAGAAGAGACAGGCCACGAAGGTCAGGCTCTTTATATTAAGTTCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR TCA 90 bp GAAGGCTCAGTCAGAATCCACTGCATGGTCAAAGGCATGCTCGGAGTGCCTCTTAAGTGTTCTCTTATCTaGGGCCAATCCCTTCCCTCC +
Preference number: 4 (lower is better)
Translates to: EGSVRIHCMVKGMLGVPLKCSLI*GQSLPS
Trigger: GGAGGGAAGGGATTGGCCTCAGATAAGAGAACACTT...AAGAGGCACTCCGAGCATGCCTTTGACCATGCAGTGGATTCTGACTGAGCCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647765.1
CDS-3UTR GCA 90 bp CACTCCATGCGGGTGCACCCACATGTGCCACAGGTTCTTCTCCAGGAAATTTCCAGGTGGGATGGAACCTaGCCCTTGACTTTTTGCATA +
Preference number: 4 (lower is better)
Translates to: HSMRVHPHVPQVLLQEISRWDGT*PLTFCI
Trigger: TATGCAAAAAGTCAAGGGGCAGGTTCCATCCCACCT...GGAAATTTCCTGGAGAAGAACCTGTGGCACATGTGGGTGCACCCGCATGGAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647765.1
CDS-3UTR GCA 90 bp GCTGAAGCTGGTATTGAACAGGCTGACTCCAGACATCCTTCAGGCTTCATATCAGGGTGCACCCACATGTaGCACAGGTTCTTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: AEAGIEQADSRHPSGFISGCTHM*HRFFSR
Trigger: CCTGGAGAAGAACCTGTGGCACATGTGGGTGCACCC...TGATATGAAGCCTGAAGGATGTCTGGAGTCAGCCTGTTCAATACCAGCTTCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445129.1
CDS-3UTR GCA 90 bp ATTATTGCTGAAGCTGGTATTGAACAGGCTGACTCCAGACATCCTTCAGGCTTCTCCACTCCATGCGGGTaGACCCACATGTGCCACAGG +
Preference number: 4 (lower is better)
Translates to: IIAEAGIEQADSRHPSGFSTPCG*THMCHR
Trigger: CCTGTGGCACATGTGGGTGCACCCGCATGGAGTGGA...GAAGCCTGAAGGATGTCTGGAGTCAGCCTGTTCAATACCAGCTTCAGCAATAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445129.1
CDS-3UTR GCA 90 bp TGTGGCTGCTGCCCTGAAGGAAGTAAGTCTTCTCCCCCAGATACTATATTCTACGTGGTTTCCACTCCATaGGGGTGCACCCACATGTGC +
Preference number: 4 (lower is better)
Translates to: CGCCPEGSKSSPPDTIFYVVSTP*GCTHMC
Trigger: GCACATGTGGGTGCACCCGCATGGAGTGGAAACCAC...GTAGAATATAGTATCTGGGGGAGAAGACTTACTTCCTTCAGGGCAGCAGCCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR GCA 90 bp CGTGGCCTGTCTCTTCTCTGTTCCCCAATAGATCAGCATGTGGGTAGTGAGGTCGCATGGTCAAAGGCATaGTCGGAGTGCCTCTTTCTT +
Preference number: 4 (lower is better)
Translates to: RGLSLLCSPIDQHVGSEVAWSKA*SECLFL
Trigger: AAGAAAGAGGCACTCCGAGCATGCCTTTGACCATGC...GACCTCACTACCCACATGCTGATCTATTGGGGAACAGAGAAGAGACAGGCCACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR GCA 90 bp AAAGACAGGTGGTTCTATGGGCAGACGGATCAGAGGGCTTTCAGCTGGGATCTGTTGGACTCCAGGAGCTaGTTTGAAGGCTCAGTCAGA +
Preference number: 4 (lower is better)
Translates to: KDRWFYGQTDQRAFSWDLLDSRS*FEGSVR
Trigger: TCTGACTGAGCCTTCAAAGCAGCTCCTGGAGTCCAA...CAGATCCCAGCTGAAAGCCCTCTGATCCGTCTGCCCATAGAACCACCTGTCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647765.1
CDS-3UTR CCA 90 bp GAGGATGATGACAAACACACAGGTTGCAATCTAGTGACCAGAGCCCTAAGTGGGGCTTGCTCACATGGTTaGCGGGTCAGCACAGTGAAC +
Preference number: 4 (lower is better)
Translates to: EDDDKHTGCNLVTRALSGACSHG*RVSTVN
Trigger: GTTCACTGTGCTGACCCGCCAACCATGTGAGCAAGC...CCCACTTAGGGCTCTGGTCACTAGATTGCAACCTGTGTGTTTGTCATCATCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR CCA 90 bp TGGGTAGTGAGGTCTCTGAAGAACAATATGCACAGAATAGCCAAGGGATGCCTCGCCTGCTTGCTCACATaGTTGGCGGGTCAGCACAGT +
Preference number: 4 (lower is better)
Translates to: WVVRSLKNNMHRIAKGCLACLLT*LAGQHS
Trigger: ACTGTGCTGACCCGCCAACCATGTGAGCAAGCAGGC...GAGGCATCCCTTGGCTATTCTGTGCATATTGTTCTTCAGAGACCTCACTACCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR CCA 90 bp ATTATTGCTGAAGCTGGTATTGAACAGGCTGACTCCAGACATCCTTCAGGCTTCATGGGGGTGGATCCGTaGAGGTGGGATGGAACCTGC +
Preference number: 4 (lower is better)
Translates to: IIAEAGIEQADSRHPSGFMGVDP*RWDGTC
Trigger: GCAGGTTCCATCCCACCTCCACGGATCCACCCCCAT...GAAGCCTGAAGGATGTCTGGAGTCAGCCTGTTCAATACCAGCTTCAGCAATAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445129.1
CDS-3UTR CCA 90 bp CAGATACTATATTCTACTGATCTGAGGGGGTTCACTGCTTACGAGATTGCTACAAGCGCATCCCAGCCGTaGCTCCCAGGTGAATGGGGG +
Preference number: 4 (lower is better)
Translates to: QILYSTDLRGFTAYEIATSASQP*LPGEWG
Trigger: CCCCCATTCACCTGGGAGCCACGGCTGGGATGCGCT...TGTAGCAATCTCGTAAGCAGTGAACCCCCTCAGATCAGTAGAATATAGTATCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR CCA 90 bp ATTATTGCTGAAGCTGGTATTGAACAGGCTGACTCCAGACATCCTTCAGGCTTCAGTCCAGGGCACCCGTaGTTTCCACTCCATGCGGGT +
Preference number: 4 (lower is better)
Translates to: IIAEAGIEQADSRHPSGFSPGHP*FPLHAG
Trigger: ACCCGCATGGAGTGGAAACCACGGGTGCCCTGGACT...GAAGCCTGAAGGATGTCTGGAGTCAGCCTGTTCAATACCAGCTTCAGCAATAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445129.1
CDS-3UTR CCA 90 bp GTAGAGCGTGTATACGTAGCCATACAGGGACACCTGCATGATGTCGCTGGTGTTGCCCACAAAGACAGGTaGTTCTATGGGCAGACGGAT +
Preference number: 4 (lower is better)
Translates to: VERVYVAIQGHLHDVAGVAHKDR*FYGQTD
Trigger: ATCCGTCTGCCCATAGAACCACCTGTCTTTGTGGGC...AACACCAGCGACATCATGCAGGTGTCCCTGTATGGCTACGTATACACGCTCTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647765.1
CDS-3UTR TCA 90 bp GTAGGATGTTCGTTCTATGACAACATCAAGTATACTTGTGGGAATGGTGACAAAGCCGTGGCTCCCAGGTaGATGGGGGTGGATCCGTGG +
Preference number: 4 (lower is better)
Translates to: VGCSFYDNIKYTCGNGDKAVAPR*MGVDPW
Trigger: CCACGGATCCACCCCCATTCACCTGGGAGCCACGGC...TTTGTCACCATTCCCACAAGTATACTTGATGTTGTCATAGAACGAACATCCTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR TCA 90 bp CGTGGCCTGTCTCTTCTCTGTTCCCCAATAGATCAGCATGTGGGTAGTGAGGTCCAAAGGGCTGGGACTTaGAGTAGCTTTGGATGCTTT +
Preference number: 4 (lower is better)
Translates to: RGLSLLCSPIDQHVGSEVQRAGT*SSFGCF
Trigger: AAAGCATCCAAAGCTACTTCAAGTCCCAGCCCTTTG...GACCTCACTACCCACATGCTGATCTATTGGGGAACAGAGAAGAGACAGGCCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR TCA 90 bp GGGGAACTTAATATAAAGAGCCTGACCTTCGTGGCCTGTCTCTTCTCTGTTCCCACAGGGACACCTGCATaGTGTCGCTGGTGTTCAGAT +
Preference number: 4 (lower is better)
Translates to: GELNIKSLTFVACLFSVPTGTPA*CRWCSD
Trigger: ATCTGAACACCAGCGACATCATGCAGGTGTCCCTGT...GGGAACAGAGAAGAGACAGGCCACGAAGGTCAGGCTCTTTATATTAAGTTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR TCA 90 bp GTCTCTGAAGAACAATATGCACAGAATAGCCAAGGGATGCCTCAAGAGGTGCTGTCCAGGTGCTGGAGTTaGAGGTGTCCAGGGAAAAGC +
Preference number: 4 (lower is better)
Translates to: VSEEQYAQNSQGMPQEVLSRCWS*RCPGKS
Trigger: GCTTTTCCCTGGACACCTTCAACTCCAGCACCTGGA...CAGCACCTCTTGAGGCATCCCTTGGCTATTCTGTGCATATTGTTCTTCAGAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR TCA 90 bp GTCTCTGAAGAACAATATGCACAGAATAGCCAAGGGATGCCTCAAGAGGTGCTGTCTGGTTGGTCAGGCTaGGCATGTAGCCAAGAGACC +
Preference number: 4 (lower is better)
Translates to: VSEEQYAQNSQGMPQEVLSGWSG*ACSQET
Trigger: GGTCTCTTGGCTACATGCTCAGCCTGACCAACCAGA...CAGCACCTCTTGAGGCATCCCTTGGCTATTCTGTGCATATTGTTCTTCAGAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR TCA 90 bp AAAGACAGGTGGTTCTATGGGCAGACGGATCAGAGGGCTTTCAGCTGGGATCTGGTTAGTTGTATTTCCTaGAGGCAGCCACTTCACCTG +
Preference number: 4 (lower is better)
Translates to: KDRWFYGQTDQRAFSWDLVSCIS*RQPLHL
Trigger: CAGGTGAAGTGGCTGCCTTCAGGAAATACAACTAAC...CAGATCCCAGCTGAAAGCCCTCTGATCCGTCTGCCCATAGAACCACCTGTCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647765.1
CDS-3UTR TCA 90 bp GAAGGCTCAGTCAGAATCCACTGCATGGTCAAAGGCATGCTCGGAGTGCCTCTTGCAGAAATCAGTATTTaGGAGGCACGTGACCTAGGT +
Preference number: 4 (lower is better)
Translates to: EGSVRIHCMVKGMLGVPLAEISI*EARDLG
Trigger: ACCTAGGTCACGTGCCTCTCAAATACTGATTTCTGC...AAGAGGCACTCCGAGCATGCCTTTGACCATGCAGTGGATTCTGACTGAGCCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647765.1
CDS-3UTR GCA 90 bp TGGGTAGTGAGGTCTCTGAAGAACAATATGCACAGAATAGCCAAGGGATGCCTCCCTGGCTGTGGCTGCTaGCCTGAAGGAAGTAAGTCT +
Preference number: 4 (lower is better)
Translates to: WVVRSLKNNMHRIAKGCLPGCGC*PEGSKS
Trigger: AGACTTACTTCCTTCAGGGCAGCAGCCACAGCCAGG...GAGGCATCCCTTGGCTATTCTGTGCATATTGTTCTTCAGAGACCTCACTACCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR CCA 90 bp GCTGAAGCTGGTATTGAACAGGCTGACTCCAGACATCCTTCAGGCTTCATATCAGCTTGCTCACATGGTTaGCGGGTCAGCACAGTGAAC +
Preference number: 4 (lower is better)
Translates to: AEAGIEQADSRHPSGFISACSHG*RVSTVN
Trigger: GTTCACTGTGCTGACCCGCCAACCATGTGAGCAAGC...TGATATGAAGCCTGAAGGATGTCTGGAGTCAGCCTGTTCAATACCAGCTTCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445129.1
CDS-3UTR CCA 90 bp GTCTCTGAAGAACAATATGCACAGAATAGCCAAGGGATGCCTCAAGAGGTGCTGTCCGTGGAGGTGGGATaGAACCTGCCCCTTGACTTT +
Preference number: 4 (lower is better)
Translates to: VSEEQYAQNSQGMPQEVLSVEVG*NLPLDF
Trigger: AAAGTCAAGGGGCAGGTTCCATCCCACCTCCACGGA...CAGCACCTCTTGAGGCATCCCTTGGCTATTCTGTGCATATTGTTCTTCAGAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR CCA 90 bp GTAGAGCGTGTATACGTAGCCATACAGGGACACCTGCATGATGTCGCTGGTGTTGGGGTTATAACTTTCTaGCCTCTGGTCCACAGTGCA +
Preference number: 4 (lower is better)
Translates to: VERVYVAIQGHLHDVAGVGVITF*PLVHSA
Trigger: TGCACTGTGGACCAGAGGCCAGAAAGTTATAACCCC...AACACCAGCGACATCATGCAGGTGTCCCTGTATGGCTACGTATACACGCTCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647765.1
CDS-3UTR CCA 90 bp TGTGGCTGCTGCCCTGAAGGAAGTAAGTCTTCTCCCCCAGATACTATATTCTACAGACAGGTGGTTCTATaGGCAGACGGATCAGAGGGC +
Preference number: 4 (lower is better)
Translates to: CGCCPEGSKSSPPDTIFYRQVVL*ADGSEG
Trigger: GCCCTCTGATCCGTCTGCCCATAGAACCACCTGTCT...GTAGAATATAGTATCTGGGGGAGAAGACTTACTTCCTTCAGGGCAGCAGCCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
3UTR CAA 72 bp CTGACTCTAAGCAGCCATTGGACTCCAGGAGCTGCTTaGAAGGCTCAGTCAGAATCCACTGCATGGTCAAAG +
Preference number: 4 (lower is better)
Translates to: LTLSSHWTPGAA*KAQSESTAWSK
Trigger: CTTTGACCATGCAGTGGATTCTGACTGAGCCTTCAAAGCAGCTCCTGGAGTCCAATGGCTGCTTAGAGTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647765.1
CDS-3UTR TCA 90 bp ATTATTGCTGAAGCTGGTATTGAACAGGCTGACTCCAGACATCCTTCAGGCTTCTCCAGGTGCTGGAGTTaGAGGTGTCCAGGGAAAAGC +
Preference number: 4 (lower is better)
Translates to: IIAEAGIEQADSRHPSGFSRCWS*RCPGKS
Trigger: GCTTTTCCCTGGACACCTTCAACTCCAGCACCTGGA...GAAGCCTGAAGGATGTCTGGAGTCAGCCTGTTCAATACCAGCTTCAGCAATAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445129.1
CDS-3UTR TCA 90 bp GCATGGTCAAAGGCATGCTCGGAGTGCCTCTTTCTTCTGGTTGCTGAACACAGGGCCAAGTCTCCTCTGTaGATTTGTAACCGTTCACAA +
Preference number: 4 (lower is better)
Translates to: AWSKACSECLFLLVAEHRAKSPL*ICNRSQ
Trigger: TTGTGAACGGTTACAAATTCACAGAGGAGACTTGGC...CCTGTGTTCAGCAACCAGAAGAAAGAGGCACTCCGAGCATGCCTTTGACCATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647765.1
CDS-3UTR TCA 90 bp CACTCCATGCGGGTGCACCCACATGTGCCACAGGTTCTTCTCCAGGAAATTTCCCTTTCTTCTGGTTGCTaGACACAGGTATGCAAGAAA +
Preference number: 4 (lower is better)
Translates to: HSMRVHPHVPQVLLQEISLSSGC*TQVCKK
Trigger: TTTCTTGCATACCTGTGTTCAGCAACCAGAAGAAAG...GGAAATTTCCTGGAGAAGAACCTGTGGCACATGTGGGTGCACCCGCATGGAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647765.1
CDS-3UTR TCA 90 bp GAAGGCTCAGTCAGAATCCACTGCATGGTCAAAGGCATGCTCGGAGTGCCTCTTGATACTATATTCTACTaGTCTGAGGGGGTTCACTGC +
Preference number: 4 (lower is better)
Translates to: EGSVRIHCMVKGMLGVPLDTIFY*SEGVHC
Trigger: GCAGTGAACCCCCTCAGATCAGTAGAATATAGTATC...AAGAGGCACTCCGAGCATGCCTTTGACCATGCAGTGGATTCTGACTGAGCCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647765.1
CDS-3UTR GCA 90 bp GCATGGTCAAAGGCATGCTCGGAGTGCCTCTTTCTTCTGGTTGCTGAACACAGGTGCCCCTTGACTTTTTaGATACACTCCTCAAAGGCT +
Preference number: 4 (lower is better)
Translates to: AWSKACSECLFLLVAEHRCPLTF*IHSSKA
Trigger: AGCCTTTGAGGAGTGTATGCAAAAAGTCAAGGGGCA...CCTGTGTTCAGCAACCAGAAGAAAGAGGCACTCCGAGCATGCCTTTGACCATGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647765.1
CDS-3UTR GCA 90 bp CAGATACTATATTCTACTGATCTGAGGGGGTTCACTGCTTACGAGATTGCTACATCCACTCCATGCGGGTaGACCCACATGTGCCACAGG +
Preference number: 4 (lower is better)
Translates to: QILYSTDLRGFTAYEIATSTPCG*THMCHR
Trigger: CCTGTGGCACATGTGGGTGCACCCGCATGGAGTGGA...TGTAGCAATCTCGTAAGCAGTGAACCCCCTCAGATCAGTAGAATATAGTATCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR GCA 90 bp AAAGACAGGTGGTTCTATGGGCAGACGGATCAGAGGGCTTTCAGCTGGGATCTGATTCTGCAGGAGCATTaGCAGAAACTTCTTCTCAGC +
Preference number: 4 (lower is better)
Translates to: KDRWFYGQTDQRAFSWDLILQEH*QKLLLS
Trigger: GCTGAGAAGAAGTTTCTGGCAATGCTCCTGCAGAAT...CAGATCCCAGCTGAAAGCCCTCTGATCCGTCTGCCCATAGAACCACCTGTCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647765.1
CDS-3UTR GCA 90 bp GAAGGCTCAGTCAGAATCCACTGCATGGTCAAAGGCATGCTCGGAGTGCCTCTTGAGACCAGGCTATGCTaGTATTCCCCACTTCTTTTT +
Preference number: 4 (lower is better)
Translates to: EGSVRIHCMVKGMLGVPLETRLC*YSPLLF
Trigger: AAAAAGAAGTGGGGAATAGCAGCATAGCCTGGTCTC...AAGAGGCACTCCGAGCATGCCTTTGACCATGCAGTGGATTCTGACTGAGCCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647765.1
CDS-3UTR GCA 90 bp GAGGATGATGACAAACACACAGGTTGCAATCTAGTGACCAGAGCCCTAAGTGGGTTGGACTCCAGGAGCTaGTTTGAAGGCTCAGTCAGA +
Preference number: 4 (lower is better)
Translates to: EDDDKHTGCNLVTRALSGLDSRS*FEGSVR
Trigger: TCTGACTGAGCCTTCAAAGCAGCTCCTGGAGTCCAA...CCCACTTAGGGCTCTGGTCACTAGATTGCAACCTGTGTGTTTGTCATCATCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR GCA 90 bp CAGCCCTTTGCTAAGCAAAAGCCTAGCAAAGGCAGTAAAATCTGGAATGCAATAGGCAGCCACTTCACCTaGATTGCCTGGTGCCACCCA +
Preference number: 4 (lower is better)
Translates to: QPFAKQKPSKGSKIWNAIGSHFT*IAWCHP
Trigger: TGGGTGGCACCAGGCAATGCAGGTGAAGTGGCTGCC...TATTGCATTCCAGATTTTACTGCCTTTGCTAGGCTTTTGCTTAGCAAAGGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR GCA 90 bp TGGGTAGTGAGGTCTCTGAAGAACAATATGCACAGAATAGCCAAGGGATGCCTCAGAATAGCCAAGGGATaGCTCAAGAGGTGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: WVVRSLKNNMHRIAKGCLRIAKG*LKRCCG
Trigger: GCCACAGCACCTCTTGAGGCATCCCTTGGCTATTCT...GAGGCATCCCTTGGCTATTCTGTGCATATTGTTCTTCAGAGACCTCACTACCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR GCA 90 bp CTTCTCTGTTCCCCAATAGATCAGCATGTGGGTAGTGAGGTCTCTGAAGAACAAAAGCCTGGCTGTGGCTaGTGCCCTGAAGGAAGTAAG +
Preference number: 4 (lower is better)
Translates to: LLCSPIDQHVGSEVSEEQKPGCG*CPEGSK
Trigger: CTTACTTCCTTCAGGGCAGCAGCCACAGCCAGGCTT...TTGTTCTTCAGAGACCTCACTACCCACATGCTGATCTATTGGGGAACAGAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR CCA 90 bp CACTCCATGCGGGTGCACCCACATGTGCCACAGGTTCTTCTCCAGGAAATTTCCGGTTATTTCCATAGCTaGAGATTCCAGAGCCTTTCA +
Preference number: 4 (lower is better)
Translates to: HSMRVHPHVPQVLLQEISGYFHS*RFQSLS
Trigger: TGAAAGGCTCTGGAATCTCCAGCTATGGAAATAACC...GGAAATTTCCTGGAGAAGAACCTGTGGCACATGTGGGTGCACCCGCATGGAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647765.1
CDS-3UTR CCA 90 bp CAGATACTATATTCTACTGATCTGAGGGGGTTCACTGCTTACGAGATTGCTACAGTGGATCCGTGGAGGTaGGATGGAACCTGCCCCTTG +
Preference number: 4 (lower is better)
Translates to: QILYSTDLRGFTAYEIATVDPWR*DGTCPL
Trigger: CAAGGGGCAGGTTCCATCCCACCTCCACGGATCCAC...TGTAGCAATCTCGTAAGCAGTGAACCCCCTCAGATCAGTAGAATATAGTATCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR CCA 90 bp CAGCCCTTTGCTAAGCAAAAGCCTAGCAAAGGCAGTAAAATCTGGAATGCAATAATGGGGGTGGATCCGTaGAGGTGGGATGGAACCTGC +
Preference number: 4 (lower is better)
Translates to: QPFAKQKPSKGSKIWNAIMGVDP*RWDGTC
Trigger: GCAGGTTCCATCCCACCTCCACGGATCCACCCCCAT...TATTGCATTCCAGATTTTACTGCCTTTGCTAGGCTTTTGCTTAGCAAAGGGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR CCA 90 bp CAGCCCTTTGCTAAGCAAAAGCCTAGCAAAGGCAGTAAAATCTGGAATGCAATATGGCTCCCAGGTGAATaGGGGTGGATCCGTGGAGGT +
Preference number: 4 (lower is better)
Translates to: QPFAKQKPSKGSKIWNAIWLPGE*GWIRGG
Trigger: ACCTCCACGGATCCACCCCCATTCACCTGGGAGCCA...TATTGCATTCCAGATTTTACTGCCTTTGCTAGGCTTTTGCTTAGCAAAGGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR CCA 90 bp TGCGGGTGCACCCACATGTGCCACAGGTTCTTCTCCAGGAAATTTCCCATTAAAACTCTAAGCAGCCATTaGACTCCAGGAGCTGCTTTG +
Preference number: 4 (lower is better)
Translates to: CGCTHMCHRFFSRKFPIKTLSSH*TPGAAL
Trigger: CAAAGCAGCTCCTGGAGTCCAATGGCTGCTTAGAGT...TTTAATGGGAAATTTCCTGGAGAAGAACCTGTGGCACATGTGGGTGCACCCGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647765.1
CDS-3UTR CCA 90 bp GTGAGGTCTCTGAAGAACAATATGCACAGAATAGCCAAGGGATGCCTCAAGAGGACTGAGGGAGGGAAATaGAAACTGAGCCCTGAGGTC +
Preference number: 4 (lower is better)
Translates to: VRSLKNNMHRIAKGCLKRTEGGK*KLSPEV
Trigger: GACCTCAGGGCTCAGTTTCCATTTCCCTCCCTCAGT...CCTCTTGAGGCATCCCTTGGCTATTCTGTGCATATTGTTCTTCAGAGACCTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR TCA 90 bp TTGCTGAAGCTGGTATTGAACAGGCTGACTCCAGACATCCTTCAGGCTTCATATACAGGGACACCTGCATaGTGTCGCTGGTGTTCAGAT +
Preference number: 4 (lower is better)
Translates to: LLKLVLNRLTPDILQASYTGTPA*CRWCSD
Trigger: ATCTGAACACCAGCGACATCATGCAGGTGTCCCTGT...ATATGAAGCCTGAAGGATGTCTGGAGTCAGCCTGTTCAATACCAGCTTCAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445129.1
CDS-3UTR TCA 90 bp GTAGGATGTTCGTTCTATGACAACATCAAGTATACTTGTGGGAATGGTGACAAAGCAAGGCTGCCGCTGTaGAGAAAGCGAGGGTGCCCA +
Preference number: 4 (lower is better)
Translates to: VGCSFYDNIKYTCGNGDKARLPL*RKRGCP
Trigger: TGGGCACCCTCGCTTTCTTCACAGCGGCAGCCTTGC...TTTGTCACCATTCCCACAAGTATACTTGATGTTGTCATAGAACGAACATCCTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR TCA 90 bp CGTGGCCTGTCTCTTCTCTGTTCCCCAATAGATCAGCATGTGGGTAGTGAGGTCATGCAGAGAGGTCTATaGTCTGGGAAAGTAATTGGT +
Preference number: 4 (lower is better)
Translates to: RGLSLLCSPIDQHVGSEVMQRGL*SGKVIG
Trigger: ACCAATTACTTTCCCAGATCATAGACCTCTCTGCAT...GACCTCACTACCCACATGCTGATCTATTGGGGAACAGAGAAGAGACAGGCCACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR GCA 90 bp TTGCTGAAGCTGGTATTGAACAGGCTGACTCCAGACATCCTTCAGGCTTCATATGGAGGGAGGACCTCTTaGTTGTGGATCTGGATGACA +
Preference number: 4 (lower is better)
Translates to: LLKLVLNRLTPDILQASYGGRTS*LWIWMT
Trigger: TGTCATCCAGATCCACAAGCAAGAGGTCCTCCCTCC...ATATGAAGCCTGAAGGATGTCTGGAGTCAGCCTGTTCAATACCAGCTTCAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445129.1
CDS-3UTR GCA 90 bp GAGGATGATGACAAACACACAGGTTGCAATCTAGTGACCAGAGCCCTAAGTGGGGCTGCTGTTTCATTTTaGAACCTCAGCAAGCGCATC +
Preference number: 4 (lower is better)
Translates to: EDDDKHTGCNLVTRALSGAAVSF*NLSKRI
Trigger: GATGCGCTTGCTGAGGTTGCAAAATGAAACAGCAGC...CCCACTTAGGGCTCTGGTCACTAGATTGCAACCTGTGTGTTTGTCATCATCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR GCA 90 bp CTTCTCTGTTCCCCAATAGATCAGCATGTGGGTAGTGAGGTCTCTGAAGAACAACCATACAGGGACACCTaGATGATGTCGCTGGTGTTC +
Preference number: 4 (lower is better)
Translates to: LLCSPIDQHVGSEVSEEQPYRDT*MMSLVF
Trigger: GAACACCAGCGACATCATGCAGGTGTCCCTGTATGG...TTGTTCTTCAGAGACCTCACTACCCACATGCTGATCTATTGGGGAACAGAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR GCA 90 bp TGCGGGTGCACCCACATGTGCCACAGGTTCTTCTCCAGGAAATTTCCCATTAAAGCCTCTGGTCCACAGTaGACAGGCTATCAAATACAT +
Preference number: 4 (lower is better)
Translates to: CGCTHMCHRFFSRKFPIKASGPQ*TGYQIH
Trigger: ATGTATTTGATAGCCTGTGCACTGTGGACCAGAGGC...TTTAATGGGAAATTTCCTGGAGAAGAACCTGTGGCACATGTGGGTGCACCCGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647765.1
CDS-3UTR GCA 90 bp GTGAGGTCTCTGAAGAACAATATGCACAGAATAGCCAAGGGATGCCTCAAGAGGCAGGTATGCAAGAAATaGCAGACACAGCAAGGCTGC +
Preference number: 4 (lower is better)
Translates to: VRSLKNNMHRIAKGCLKRQVCKK*QTQQGC
Trigger: GCAGCCTTGCTGTGTCTGGCATTTCTTGCATACCTG...CCTCTTGAGGCATCCCTTGGCTATTCTGTGCATATTGTTCTTCAGAGACCTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR GCA 90 bp TCTGGGGACATCTTGGGGGTTATTTCCATAGCTGGAGATTCCAGAGCCTTTCACGGATGCCTCAAGAGGTaGTGTGGCAGAAATCAGTAT +
Preference number: 4 (lower is better)
Translates to: SGDILGVISIAGDSRAFHGCLKR*CGRNQY
Trigger: ATACTGATTTCTGCCACAGCACCTCTTGAGGCATCC...GTGAAAGGCTCTGGAATCTCCAGCTATGGAAATAACCCCCAAGATGTCCCCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647765.1
CDS-3UTR GCA 90 bp TCTGGGGACATCTTGGGGGTTATTTCCATAGCTGGAGATTCCAGAGCCTTTCACGACAAACACACAGGTTaGAATCTAGTGACCAGAGCC +
Preference number: 4 (lower is better)
Translates to: SGDILGVISIAGDSRAFHDKHTG*NLVTRA
Trigger: GGCTCTGGTCACTAGATTGCAACCTGTGTGTTTGTC...GTGAAAGGCTCTGGAATCTCCAGCTATGGAAATAACCCCCAAGATGTCCCCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647765.1
CDS-3UTR CCA 90 bp TGTGGCTGCTGCCCTGAAGGAAGTAAGTCTTCTCCCCCAGATACTATATTCTACACTCCTCAAAGGCTCTaGGGACATCTTGGGGGTTAT +
Preference number: 4 (lower is better)
Translates to: CGCCPEGSKSSPPDTIFYTPQRL*GHLGGY
Trigger: ATAACCCCCAAGATGTCCCCAGAGCCTTTGAGGAGT...GTAGAATATAGTATCTGGGGGAGAAGACTTACTTCCTTCAGGGCAGCAGCCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR CCA 90 bp AATCTAATTATTGCTGAAGCTGGTATTGAACAGGCTGACTCCAGACATCCTTCAGTGGATCCGTGGAGGTaGGATGGAACCTGCCCCTTG +
Preference number: 4 (lower is better)
Translates to: NLIIAEAGIEQADSRHPSVDPWR*DGTCPL
Trigger: CAAGGGGCAGGTTCCATCCCACCTCCACGGATCCAC...TGAAGGATGTCTGGAGTCAGCCTGTTCAATACCAGCTTCAGCAATAATTAGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445129.1
CDS-3UTR CCA 90 bp AATCTAATTATTGCTGAAGCTGGTATTGAACAGGCTGACTCCAGACATCCTTCACCAGGTGAATGGGGGTaGATCCGTGGAGGTGGGATG +
Preference number: 4 (lower is better)
Translates to: NLIIAEAGIEQADSRHPSPGEWG*IRGGGM
Trigger: CATCCCACCTCCACGGATCCACCCCCATTCACCTGG...TGAAGGATGTCTGGAGTCAGCCTGTTCAATACCAGCTTCAGCAATAATTAGATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445129.1
CDS-3UTR CCA 90 bp AATCTAATTATTGCTGAAGCTGGTATTGAACAGGCTGACTCCAGACATCCTTCATGGCTCCCAGGTGAATaGGGGTGGATCCGTGGAGGT +
Preference number: 4 (lower is better)
Translates to: NLIIAEAGIEQADSRHPSWLPGE*GWIRGG
Trigger: ACCTCCACGGATCCACCCCCATTCACCTGGGAGCCA...TGAAGGATGTCTGGAGTCAGCCTGTTCAATACCAGCTTCAGCAATAATTAGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445129.1
CDS-3UTR CCA 90 bp AGAGGCCTAATGCAGGATATTGATTGGTTTAATCTAATTATTGCTGAAGCTGGTAGCGCATCCCAGCCGTaGCTCCCAGGTGAATGGGGG +
Preference number: 4 (lower is better)
Translates to: RGLMQDIDWFNLIIAEAGSASQP*LPGEWG
Trigger: CCCCCATTCACCTGGGAGCCACGGCTGGGATGCGCT...ACCAGCTTCAGCAATAATTAGATTAAACCAATCAATATCCTGCATTAGGCCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445129.1
CDS-3UTR CCA 90 bp ATTATTGCTGAAGCTGGTATTGAACAGGCTGACTCCAGACATCCTTCAGGCTTCGCCACGAAGGATATTTaGGTGGAGGCACCACCTAAG +
Preference number: 4 (lower is better)
Translates to: IIAEAGIEQADSRHPSGFATKDI*VEAPPK
Trigger: CTTAGGTGGTGCCTCCACCCAAATATCCTTCGTGGC...GAAGCCTGAAGGATGTCTGGAGTCAGCCTGTTCAATACCAGCTTCAGCAATAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445129.1
CDS-3UTR CCA 90 bp TGTGGCTGCTGCCCTGAAGGAAGTAAGTCTTCTCCCCCAGATACTATATTCTACTCAGAATCCACTGCATaGTCAAAGGCATGCTCGGAG +
Preference number: 4 (lower is better)
Translates to: CGCCPEGSKSSPPDTIFYSESTA*SKACSE
Trigger: CTCCGAGCATGCCTTTGACCATGCAGTGGATTCTGA...GTAGAATATAGTATCTGGGGGAGAAGACTTACTTCCTTCAGGGCAGCAGCCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR CCA 90 bp TGTGGCTGCTGCCCTGAAGGAAGTAAGTCTTCTCCCCCAGATACTATATTCTACACTCTAAGCAGCCATTaGACTCCAGGAGCTGCTTTG +
Preference number: 4 (lower is better)
Translates to: CGCCPEGSKSSPPDTIFYTLSSH*TPGAAL
Trigger: CAAAGCAGCTCCTGGAGTCCAATGGCTGCTTAGAGT...GTAGAATATAGTATCTGGGGGAGAAGACTTACTTCCTTCAGGGCAGCAGCCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR TCA 90 bp ATTATTGCTGAAGCTGGTATTGAACAGGCTGACTCCAGACATCCTTCAGGCTTCAGACCACCAAGGCAATaGTGGTTGGAGTTCGGTAGA +
Preference number: 4 (lower is better)
Translates to: IIAEAGIEQADSRHPSGFRPPRQ*WLEFGR
Trigger: TCTACCGAACTCCAACCATCATTGCCTTGGTGGTCT...GAAGCCTGAAGGATGTCTGGAGTCAGCCTGTTCAATACCAGCTTCAGCAATAAT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445129.1
CDS-3UTR TCA 90 bp CTTCTCTGTTCCCCAATAGATCAGCATGTGGGTAGTGAGGTCTCTGAAGAACAAAGACCACCAAGGCAATaGTGGTTGGAGTTCGGTAGA +
Preference number: 4 (lower is better)
Translates to: LLCSPIDQHVGSEVSEEQRPPRQ*WLEFGR
Trigger: TCTACCGAACTCCAACCATCATTGCCTTGGTGGTCT...TTGTTCTTCAGAGACCTCACTACCCACATGCTGATCTATTGGGGAACAGAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR TCA 90 bp TGGGTAGTGAGGTCTCTGAAGAACAATATGCACAGAATAGCCAAGGGATGCCTCATGGAACCTGCCCCTTaGCTTTTTGCATACACTCCT +
Preference number: 4 (lower is better)
Translates to: WVVRSLKNNMHRIAKGCLMEPAP*LFAYTP
Trigger: AGGAGTGTATGCAAAAAGTCAAGGGGCAGGTTCCAT...GAGGCATCCCTTGGCTATTCTGTGCATATTGTTCTTCAGAGACCTCACTACCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR TCA 90 bp GAGGATGATGACAAACACACAGGTTGCAATCTAGTGACCAGAGCCCTAAGTGGGTGCCCAGAAATGATTTaGGCACCCCTAAAGTCAAAG +
Preference number: 4 (lower is better)
Translates to: EDDDKHTGCNLVTRALSGCPEMI*APLKSK
Trigger: CTTTGACTTTAGGGGTGCTCAAATCATTTCTGGGCA...CCCACTTAGGGCTCTGGTCACTAGATTGCAACCTGTGTGTTTGTCATCATCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR TCA 90 bp GTAGAGCGTGTATACGTAGCCATACAGGGACACCTGCATGATGTCGCTGGTGTTGATCATGGCAAGCTTTaGAGTCAAATATGGAAGCCA +
Preference number: 4 (lower is better)
Translates to: VERVYVAIQGHLHDVAGVDHGKL*SQIWKP
Trigger: TGGCTTCCATATTTGACTTCAAAGCTTGCCATGATC...AACACCAGCGACATCATGCAGGTGTCCCTGTATGGCTACGTATACACGCTCTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647765.1
CDS-3UTR TCA 90 bp TGGGTAGTGAGGTCTCTGAAGAACAATATGCACAGAATAGCCAAGGGATGCCTCCTGACTCCAATTCTGTaGGCAGAAATTCCAGGTGCT +
Preference number: 4 (lower is better)
Translates to: WVVRSLKNNMHRIAKGCLLTPIL*AEIPGA
Trigger: AGCACCTGGAATTTCTGCTCACAGAATTGGAGTCAG...GAGGCATCCCTTGGCTATTCTGTGCATATTGTTCTTCAGAGACCTCACTACCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR TCA 90 bp CGTGGCCTGTCTCTTCTCTGTTCCCCAATAGATCAGCATGTGGGTAGTGAGGTCTATTTGAGAGGCACGTaGCCTAGGTGTTTGATTTTA +
Preference number: 4 (lower is better)
Translates to: RGLSLLCSPIDQHVGSEVYLRGT*PRCLIL
Trigger: TAAAATCAAACACCTAGGTCACGTGCCTCTCAAATA...GACCTCACTACCCACATGCTGATCTATTGGGGAACAGAGAAGAGACAGGCCACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR TCA 90 bp GGGGAACTTAATATAAAGAGCCTGACCTTCGTGGCCTGTCTCTTCTCTGTTCCCCAAAGTCAAGACCTATaGCTACTATGCAGAGAGGTC +
Preference number: 4 (lower is better)
Translates to: GELNIKSLTFVACLFSVPQSQDL*LLCREV
Trigger: GACCTCTCTGCATAGTAGTCATAGGTCTTGACTTTG...GGGAACAGAGAAGAGACAGGCCACGAAGGTCAGGCTCTTTATATTAAGTTCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR GCA 90 bp CATAGAGTAGGATGTTCGTTCTATGACAACATCAAGTATACTTGTGGGAATGGTGCCTTGAGGCCTGCTTaGTCACATGGTTGGCGGGTC +
Preference number: 4 (lower is better)
Translates to: HRVGCSFYDNIKYTCGNGALRPA*SHGWRV
Trigger: GACCCGCCAACCATGTGAGCAAGCAGGCCTCAAGGC...ACCATTCCCACAAGTATACTTGATGTTGTCATAGAACGAACATCCTACTCTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR GCA 90 bp GAGGATGATGACAAACACACAGGTTGCAATCTAGTGACCAGAGCCCTAAGTGGGTGCCCCTTGACTTTTTaGATACACTCCTCAAAGGCT +
Preference number: 4 (lower is better)
Translates to: EDDDKHTGCNLVTRALSGCPLTF*IHSSKA
Trigger: AGCCTTTGAGGAGTGTATGCAAAAAGTCAAGGGGCA...CCCACTTAGGGCTCTGGTCACTAGATTGCAACCTGTGTGTTTGTCATCATCCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR GCA 90 bp AGAACAGGTTTCTTGATCATGGCAAGCTTTGAAGTCAAATATGGAAGCCACCTTGGGTGCACCCACATGTaGCACAGGTTCTTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: RTGFLIMASFEVKYGSHLGCTHM*HRFFSR
Trigger: CCTGGAGAAGAACCTGTGGCACATGTGGGTGCACCC...AAGGTGGCTTCCATATTTGACTTCAAAGCTTGCCATGATCAAGAAACCTGTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647765.1
CDS-3UTR GCA 90 bp GGGGAACTTAATATAAAGAGCCTGACCTTCGTGGCCTGTCTCTTCTCTGTTCCCATTCTGCAGGAGCATTaGCAGAAACTTCTTCTCAGC +
Preference number: 4 (lower is better)
Translates to: GELNIKSLTFVACLFSVPILQEH*QKLLLS
Trigger: GCTGAGAAGAAGTTTCTGGCAATGCTCCTGCAGAAT...GGGAACAGAGAAGAGACAGGCCACGAAGGTCAGGCTCTTTATATTAAGTTCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR GCA 90 bp GGGGAACTTAATATAAAGAGCCTGACCTTCGTGGCCTGTCTCTTCTCTGTTCCCTTGGTAGGAGAATTCTaGAGGAGCATTGCCAGAAAC +
Preference number: 4 (lower is better)
Translates to: GELNIKSLTFVACLFSVPLVGEF*RSIARN
Trigger: GTTTCTGGCAATGCTCCTGCAGAATTCTCCTACCAA...GGGAACAGAGAAGAGACAGGCCACGAAGGTCAGGCTCTTTATATTAAGTTCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR GCA 90 bp GTCTCTGAAGAACAATATGCACAGAATAGCCAAGGGATGCCTCAAGAGGTGCTGCAAGAGACCAGGCTATaGTGCTATTCCCCACTTCTT +
Preference number: 4 (lower is better)
Translates to: VSEEQYAQNSQGMPQEVLQETRL*CYSPLL
Trigger: AAGAAGTGGGGAATAGCAGCATAGCCTGGTCTCTTG...CAGCACCTCTTGAGGCATCCCTTGGCTATTCTGTGCATATTGTTCTTCAGAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR GCA 90 bp AAGACCTATGACTACTATGCAGAGAGGTCTATGATCTGGGAAAGTAATTGGTTACCACTTCACCTGCATTaGCTGGTGCCACCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: KTYDYYAERSMIWESNWLPLHLH*LVPPRL
Trigger: CAGCCTGGGTGGCACCAGGCAATGCAGGTGAAGTGG...TAACCAATTACTTTCCCAGATCATAGACCTCTCTGCATAGTAGTCATAGGTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR GCA 90 bp CGTGGCCTGTCTCTTCTCTGTTCCCCAATAGATCAGCATGTGGGTAGTGAGGTCTGTAGCCATTGGATTTaGTGGAGTTCTTTCTCATTC +
Preference number: 4 (lower is better)
Translates to: RGLSLLCSPIDQHVGSEVCSHWI*WSSFSF
Trigger: GAATGAGAAAGAACTCCAGCAAATCCAATGGCTACA...GACCTCACTACCCACATGCTGATCTATTGGGGAACAGAGAAGAGACAGGCCACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR CCA 90 bp AATCTAATTATTGCTGAAGCTGGTATTGAACAGGCTGACTCCAGACATCCTTCAGCCTGCTTGCTCACATaGTTGGCGGGTCAGCACAGT +
Preference number: 4 (lower is better)
Translates to: NLIIAEAGIEQADSRHPSACLLT*LAGQHS
Trigger: ACTGTGCTGACCCGCCAACCATGTGAGCAAGCAGGC...TGAAGGATGTCTGGAGTCAGCCTGTTCAATACCAGCTTCAGCAATAATTAGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445129.1
CDS-3UTR CCA 90 bp TTGCTGAAGCTGGTATTGAACAGGCTGACTCCAGACATCCTTCAGGCTTCATATACCATACTTCAGTCCTaGAGGGAGGACCTCTTGCTT +
Preference number: 4 (lower is better)
Translates to: LLKLVLNRLTPDILQASYTILQS*REDLLL
Trigger: AAGCAAGAGGTCCTCCCTCCAGGACTGAAGTATGGT...ATATGAAGCCTGAAGGATGTCTGGAGTCAGCCTGTTCAATACCAGCTTCAGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445129.1
CDS-3UTR CCA 90 bp CATAGAGTAGGATGTTCGTTCTATGACAACATCAAGTATACTTGTGGGAATGGTTGGCTCCCAGGTGAATaGGGGTGGATCCGTGGAGGT +
Preference number: 4 (lower is better)
Translates to: HRVGCSFYDNIKYTCGNGWLPGE*GWIRGG
Trigger: ACCTCCACGGATCCACCCCCATTCACCTGGGAGCCA...ACCATTCCCACAAGTATACTTGATGTTGTCATAGAACGAACATCCTACTCTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR CCA 90 bp CATAGAGTAGGATGTTCGTTCTATGACAACATCAAGTATACTTGTGGGAATGGTAGTCCAGGGCACCCGTaGTTTCCACTCCATGCGGGT +
Preference number: 4 (lower is better)
Translates to: HRVGCSFYDNIKYTCGNGSPGHP*FPLHAG
Trigger: ACCCGCATGGAGTGGAAACCACGGGTGCCCTGGACT...ACCATTCCCACAAGTATACTTGATGTTGTCATAGAACGAACATCCTACTCTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR CCA 90 bp GAGGATGATGACAAACACACAGGTTGCAATCTAGTGACCAGAGCCCTAAGTGGGAGGCTATCAAATACATaGCCCATGGTGAAGCTGATG +
Preference number: 4 (lower is better)
Translates to: EDDDKHTGCNLVTRALSGRLSNT*PMVKLM
Trigger: CATCAGCTTCACCATGGGCCATGTATTTGATAGCCT...CCCACTTAGGGCTCTGGTCACTAGATTGCAACCTGTGTGTTTGTCATCATCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR CCA 90 bp CAGATACTATATTCTACTGATCTGAGGGGGTTCACTGCTTACGAGATTGCTACAAGACAGGTGGTTCTATaGGCAGACGGATCAGAGGGC +
Preference number: 4 (lower is better)
Translates to: QILYSTDLRGFTAYEIATRQVVL*ADGSEG
Trigger: GCCCTCTGATCCGTCTGCCCATAGAACCACCTGTCT...TGTAGCAATCTCGTAAGCAGTGAACCCCCTCAGATCAGTAGAATATAGTATCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR CCA 90 bp ACAAGTGGTAGATGTAGTTGGCTGAGAAGCAGTAAGAGCGGGCATATACCTCATTCAGAATCCACTGCATaGTCAAAGGCATGCTCGGAG +
Preference number: 4 (lower is better)
Translates to: TSGRCSWLRSSKSGHIPHSESTA*SKACSE
Trigger: CTCCGAGCATGCCTTTGACCATGCAGTGGATTCTGA...ATGAGGTATATGCCCGCTCTTACTGCTTCTCAGCCAACTACATCTACCACTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647765.1
CDS-3UTR CCA 90 bp GTCTCTGAAGAACAATATGCACAGAATAGCCAAGGGATGCCTCAAGAGGTGCTGGACCAGAGCCCTAAGTaGGAATTCCACTTGGAGAAT +
Preference number: 4 (lower is better)
Translates to: VSEEQYAQNSQGMPQEVLDQSPK*EFHLEN
Trigger: ATTCTCCAAGTGGAATTCCCACTTAGGGCTCTGGTC...CAGCACCTCTTGAGGCATCCCTTGGCTATTCTGTGCATATTGTTCTTCAGAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR TCA 90 bp TTGCTGAAGCTGGTATTGAACAGGCTGACTCCAGACATCCTTCAGGCTTCATATCAAAGGGCTGGGACTTaGAGTAGCTTTGGATGCTTT +
Preference number: 4 (lower is better)
Translates to: LLKLVLNRLTPDILQASYQRAGT*SSFGCF
Trigger: AAAGCATCCAAAGCTACTTCAAGTCCCAGCCCTTTG...ATATGAAGCCTGAAGGATGTCTGGAGTCAGCCTGTTCAATACCAGCTTCAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445129.1
CDS-3UTR TCA 90 bp CAGCCCTTTGCTAAGCAAAAGCCTAGCAAAGGCAGTAAAATCTGGAATGCAATAGTAGATGTAGTTGGCTaGGAAGCAGTAAGAGCGGGC +
Preference number: 4 (lower is better)
Translates to: QPFAKQKPSKGSKIWNAIVDVVG*EAVRAG
Trigger: GCCCGCTCTTACTGCTTCTCAGCCAACTACATCTAC...TATTGCATTCCAGATTTTACTGCCTTTGCTAGGCTTTTGCTTAGCAAAGGGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR TCA 90 bp TGTGGCTGCTGCCCTGAAGGAAGTAAGTCTTCTCCCCCAGATACTATATTCTACGCCAAGTCTCCTCTGTaGATTTGTAACCGTTCACAA +
Preference number: 4 (lower is better)
Translates to: CGCCPEGSKSSPPDTIFYAKSPL*ICNRSQ
Trigger: TTGTGAACGGTTACAAATTCACAGAGGAGACTTGGC...GTAGAATATAGTATCTGGGGGAGAAGACTTACTTCCTTCAGGGCAGCAGCCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR TCA 90 bp CTTCTCTGTTCCCCAATAGATCAGCATGTGGGTAGTGAGGTCTCTGAAGAACAAGAGGGAAATGGAAACTaGGCCCTGAGGTCAATTCTT +
Preference number: 4 (lower is better)
Translates to: LLCSPIDQHVGSEVSEEQEGNGN*ALRSIL
Trigger: AAGAATTGACCTCAGGGCTCAGTTTCCATTTCCCTC...TTGTTCTTCAGAGACCTCACTACCCACATGCTGATCTATTGGGGAACAGAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR TCA 90 bp CGTGGCCTGTCTCTTCTCTGTTCCCCAATAGATCAGCATGTGGGTAGTGAGGTCATAGCAATACAATGGTaGGATGAGGATGATGACAAA +
Preference number: 4 (lower is better)
Translates to: RGLSLLCSPIDQHVGSEVIAIQW*DEDDDK
Trigger: TTTGTCATCATCCTCATCTCACCATTGTATTGCTAT...GACCTCACTACCCACATGCTGATCTATTGGGGAACAGAGAAGAGACAGGCCACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR GCA 90 bp AGAGGCCTAATGCAGGATATTGATTGGTTTAATCTAATTATTGCTGAAGCTGGTGCCTTGAGGCCTGCTTaGTCACATGGTTGGCGGGTC +
Preference number: 4 (lower is better)
Translates to: RGLMQDIDWFNLIIAEAGALRPA*SHGWRV
Trigger: GACCCGCCAACCATGTGAGCAAGCAGGCCTCAAGGC...ACCAGCTTCAGCAATAATTAGATTAAACCAATCAATATCCTGCATTAGGCCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445129.1
CDS-3UTR GCA 90 bp CAGATACTATATTCTACTGATCTGAGGGGGTTCACTGCTTACGAGATTGCTACAGGAGGGAGGACCTCTTaGTTGTGGATCTGGATGACA +
Preference number: 4 (lower is better)
Translates to: QILYSTDLRGFTAYEIATGGRTS*LWIWMT
Trigger: TGTCATCCAGATCCACAAGCAAGAGGTCCTCCCTCC...TGTAGCAATCTCGTAAGCAGTGAACCCCCTCAGATCAGTAGAATATAGTATCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR GCA 90 bp TTGCTGAAGCTGGTATTGAACAGGCTGACTCCAGACATCCTTCAGGCTTCATATGCTGCTGTTTCATTTTaGAACCTCAGCAAGCGCATC +
Preference number: 4 (lower is better)
Translates to: LLKLVLNRLTPDILQASYAAVSF*NLSKRI
Trigger: GATGCGCTTGCTGAGGTTGCAAAATGAAACAGCAGC...ATATGAAGCCTGAAGGATGTCTGGAGTCAGCCTGTTCAATACCAGCTTCAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445129.1
CDS-3UTR GCA 90 bp GCTGAAGCTGGTATTGAACAGGCTGACTCCAGACATCCTTCAGGCTTCATATCAATCCATCTTCTCTCCTaGCACGAAGGATATTTGGGT +
Preference number: 4 (lower is better)
Translates to: AEAGIEQADSRHPSGFISIHLLS*HEGYLG
Trigger: ACCCAAATATCCTTCGTGGCAGGAGAGAAGATGGAT...TGATATGAAGCCTGAAGGATGTCTGGAGTCAGCCTGTTCAATACCAGCTTCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445129.1
CDS-3UTR GCA 90 bp GCTGAAGCTGGTATTGAACAGGCTGACTCCAGACATCCTTCAGGCTTCATATCAATTCTGCAGGAGCATTaGCAGAAACTTCTTCTCAGC +
Preference number: 4 (lower is better)
Translates to: AEAGIEQADSRHPSGFISILQEH*QKLLLS
Trigger: GCTGAGAAGAAGTTTCTGGCAATGCTCCTGCAGAAT...TGATATGAAGCCTGAAGGATGTCTGGAGTCAGCCTGTTCAATACCAGCTTCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445129.1
CDS-3UTR GCA 90 bp GTGAGGTCTCTGAAGAACAATATGCACAGAATAGCCAAGGGATGCCTCAAGAGGTTGGTAGGAGAATTCTaGAGGAGCATTGCCAGAAAC +
Preference number: 4 (lower is better)
Translates to: VRSLKNNMHRIAKGCLKRLVGEF*RSIARN
Trigger: GTTTCTGGCAATGCTCCTGCAGAATTCTCCTACCAA...CCTCTTGAGGCATCCCTTGGCTATTCTGTGCATATTGTTCTTCAGAGACCTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR GCA 90 bp ATTATTGCTGAAGCTGGTATTGAACAGGCTGACTCCAGACATCCTTCAGGCTTCGCCTCTGGTCCACAGTaGACAGGCTATCAAATACAT +
Preference number: 4 (lower is better)
Translates to: IIAEAGIEQADSRHPSGFASGPQ*TGYQIH
Trigger: ATGTATTTGATAGCCTGTGCACTGTGGACCAGAGGC...GAAGCCTGAAGGATGTCTGGAGTCAGCCTGTTCAATACCAGCTTCAGCAATAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445129.1
CDS-3UTR GCA 90 bp GTGAGGTCTCTGAAGAACAATATGCACAGAATAGCCAAGGGATGCCTCAAGAGGTGTGTAGTAGAATCCTaGAAAAGCCACAAATGGCCC +
Preference number: 4 (lower is better)
Translates to: VRSLKNNMHRIAKGCLKRCVVES*KSHKWP
Trigger: GGGCCATTTGTGGCTTTTGCAGGATTCTACTACACA...CCTCTTGAGGCATCCCTTGGCTATTCTGTGCATATTGTTCTTCAGAGACCTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR GCA 90 bp GTGAGGTCTCTGAAGAACAATATGCACAGAATAGCCAAGGGATGCCTCAAGAGGGAGACCAGGCTATGCTaGTATTCCCCACTTCTTTTT +
Preference number: 4 (lower is better)
Translates to: VRSLKNNMHRIAKGCLKRETRLC*YSPLLF
Trigger: AAAAAGAAGTGGGGAATAGCAGCATAGCCTGGTCTC...CCTCTTGAGGCATCCCTTGGCTATTCTGTGCATATTGTTCTTCAGAGACCTCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR GCA 90 bp CTCCCCCAGATACTATATTCTACTGATCTGAGGGGGTTCACTGCTTACGAGATTTCAGTCAGAATCCACTaGATGGTCAAAGGCATGCTC +
Preference number: 4 (lower is better)
Translates to: LPQILYSTDLRGFTAYEISVRIH*MVKGML
Trigger: GAGCATGCCTTTGACCATGCAGTGGATTCTGACTGA...AATCTCGTAAGCAGTGAACCCCCTCAGATCAGTAGAATATAGTATCTGGGGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR GCA 90 bp GAGAAAGAGTACCATATGGAAGTTAACACACACACACCCCTTGCAAGTCAAAATCCTGGCTGTGGCTGCTaGCCTGAAGGAAGTAAGTCT +
Preference number: 4 (lower is better)
Translates to: EKEYHMEVNTHTPLASQNPGCGC*PEGSKS
Trigger: AGACTTACTTCCTTCAGGGCAGCAGCCACAGCCAGG...ATTTTGACTTGCAAGGGGTGTGTGTGTGTTAACTTCCATATGGTACTCTTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR CCA 90 bp TCTGGGGACATCTTGGGGGTTATTTCCATAGCTGGAGATTCCAGAGCCTTTCACTCTTGCTTGTGGATCTaGATGACAGTGATACTCACA +
Preference number: 4 (lower is better)
Translates to: SGDILGVISIAGDSRAFHSCLWI*MTVILT
Trigger: TGTGAGTATCACTGTCATCCAGATCCACAAGCAAGA...GTGAAAGGCTCTGGAATCTCCAGCTATGGAAATAACCCCCAAGATGTCCCCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647765.1
CDS-3UTR CCA 90 bp ATTATTGCTGAAGCTGGTATTGAACAGGCTGACTCCAGACATCCTTCAGGCTTCGATACACGTAGACTGTaGTTCTTGAAGACCCGGCAT +
Preference number: 4 (lower is better)
Translates to: IIAEAGIEQADSRHPSGFDTRRL*FLKTRH
Trigger: ATGCCGGGTCTTCAAGAACCACAGTCTACGTGTATC...GAAGCCTGAAGGATGTCTGGAGTCAGCCTGTTCAATACCAGCTTCAGCAATAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445129.1
CDS-3UTR CCA 90 bp ATCAAAAGAACAGGTTTCTTGATCATGGCAAGCTTTGAAGTCAAATATGGAAGCCCAGGTGAATGGGGGTaGATCCGTGGAGGTGGGATG +
Preference number: 4 (lower is better)
Translates to: IKRTGFLIMASFEVKYGSPGEWG*IRGGGM
Trigger: CATCCCACCTCCACGGATCCACCCCCATTCACCTGG...GCTTCCATATTTGACTTCAAAGCTTGCCATGATCAAGAAACCTGTTCTTTTGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647765.1
CDS-3UTR CCA 90 bp ACAAGTGGTAGATGTAGTTGGCTGAGAAGCAGTAAGAGCGGGCATATACCTCATCTCCTTACACAGAGATaGGTCCCCAGTTCCTTCAAA +
Preference number: 4 (lower is better)
Translates to: TSGRCSWLRSSKSGHIPHLLTQR*VPSSFK
Trigger: TTTGAAGGAACTGGGGACCCATCTCTGTGTAAGGAG...ATGAGGTATATGCCCGCTCTTACTGCTTCTCAGCCAACTACATCTACCACTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647765.1
CDS-3UTR CCA 90 bp GGGGAACTTAATATAAAGAGCCTGACCTTCGTGGCCTGTCTCTTCTCTGTTCCCTGCAAAAGCCACAAATaGCCCTTTAATCTTTGGCTG +
Preference number: 4 (lower is better)
Translates to: GELNIKSLTFVACLFSVPCKSHK*PFNLWL
Trigger: CAGCCAAAGATTAAAGGGCCATTTGTGGCTTTTGCA...GGGAACAGAGAAGAGACAGGCCACGAAGGTCAGGCTCTTTATATTAAGTTCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR CCA 90 bp GTGAGGTCTCTGAAGAACAATATGCACAGAATAGCCAAGGGATGCCTCAAGAGGCCTCAAGAGGTGCTGTaGCAGAAATCAGTATTTGAG +
Preference number: 4 (lower is better)
Translates to: VRSLKNNMHRIAKGCLKRPQEVL*QKSVFE
Trigger: CTCAAATACTGATTTCTGCCACAGCACCTCTTGAGG...CCTCTTGAGGCATCCCTTGGCTATTCTGTGCATATTGTTCTTCAGAGACCTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR CCA 90 bp GGTGTTCAGATCCATCTTCTCTCCTGCCACGAAGGATATTTGGGTGGAGGCACCAGTGGGAATTCCACTTaGAGAATGGTCTATAGTTTT +
Preference number: 4 (lower is better)
Translates to: GVQIHLLSCHEGYLGGGTSGNST*RMVYSF
Trigger: AAAACTATAGACCATTCTCCAAGTGGAATTCCCACT...GGTGCCTCCACCCAAATATCCTTCGTGGCAGGAGAGAAGATGGATCTGAACACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647765.1
CDS-3UTR CCA 90 bp TTGCCCAGAAATGATTTGAGCACCCCTAAAGTCAAAGGGCTGGGACTTGAAGTAGACCAGAGCCCTAAGTaGGAATTCCACTTGGAGAAT +
Preference number: 4 (lower is better)
Translates to: LPRNDLSTPKVKGLGLEVDQSPK*EFHLEN
Trigger: ATTCTCCAAGTGGAATTCCCACTTAGGGCTCTGGTC...TACTTCAAGTCCCAGCCCTTTGACTTTAGGGGTGCTCAAATCATTTCTGGGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647765.1
CDS-3UTR TCA 90 bp AATCTAATTATTGCTGAAGCTGGTATTGAACAGGCTGACTCCAGACATCCTTCAGGCGGGTCAGCACAGTaGACATCTTTTCTCCTAGCT +
Preference number: 4 (lower is better)
Translates to: NLIIAEAGIEQADSRHPSGGSAQ*TSFLLA
Trigger: AGCTAGGAGAAAAGATGTTCACTGTGCTGACCCGCC...TGAAGGATGTCTGGAGTCAGCCTGTTCAATACCAGCTTCAGCAATAATTAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445129.1
CDS-3UTR TCA 90 bp ATTATTGCTGAAGCTGGTATTGAACAGGCTGACTCCAGACATCCTTCAGGCTTCTGCCCAGAAATGATTTaGGCACCCCTAAAGTCAAAG +
Preference number: 4 (lower is better)
Translates to: IIAEAGIEQADSRHPSGFCPEMI*APLKSK
Trigger: CTTTGACTTTAGGGGTGCTCAAATCATTTCTGGGCA...GAAGCCTGAAGGATGTCTGGAGTCAGCCTGTTCAATACCAGCTTCAGCAATAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445129.1
CDS-3UTR TCA 90 bp GAGAAAGAGTACCATATGGAAGTTAACACACACACACCCCTTGCAAGTCAAAATACAGGGACACCTGCATaGTGTCGCTGGTGTTCAGAT +
Preference number: 4 (lower is better)
Translates to: EKEYHMEVNTHTPLASQNTGTPA*CRWCSD
Trigger: ATCTGAACACCAGCGACATCATGCAGGTGTCCCTGT...ATTTTGACTTGCAAGGGGTGTGTGTGTGTTAACTTCCATATGGTACTCTTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR TCA 90 bp TGGGTAGTGAGGTCTCTGAAGAACAATATGCACAGAATAGCCAAGGGATGCCTCGATCATGGCAAGCTTTaGAGTCAAATATGGAAGCCA +
Preference number: 4 (lower is better)
Translates to: WVVRSLKNNMHRIAKGCLDHGKL*SQIWKP
Trigger: TGGCTTCCATATTTGACTTCAAAGCTTGCCATGATC...GAGGCATCCCTTGGCTATTCTGTGCATATTGTTCTTCAGAGACCTCACTACCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR TCA 90 bp AATCTAATTATTGCTGAAGCTGGTATTGAACAGGCTGACTCCAGACATCCTTCAGTAGATGTAGTTGGCTaGGAAGCAGTAAGAGCGGGC +
Preference number: 4 (lower is better)
Translates to: NLIIAEAGIEQADSRHPSVDVVG*EAVRAG
Trigger: GCCCGCTCTTACTGCTTCTCAGCCAACTACATCTAC...TGAAGGATGTCTGGAGTCAGCCTGTTCAATACCAGCTTCAGCAATAATTAGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445129.1
CDS-3UTR TCA 90 bp TTGCTGAAGCTGGTATTGAACAGGCTGACTCCAGACATCCTTCAGGCTTCATATGCCAAGTCTCCTCTGTaGATTTGTAACCGTTCACAA +
Preference number: 4 (lower is better)
Translates to: LLKLVLNRLTPDILQASYAKSPL*ICNRSQ
Trigger: TTGTGAACGGTTACAAATTCACAGAGGAGACTTGGC...ATATGAAGCCTGAAGGATGTCTGGAGTCAGCCTGTTCAATACCAGCTTCAGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445129.1
CDS-3UTR GCA 90 bp GGTGTTCAGATCCATCTTCTCTCCTGCCACGAAGGATATTTGGGTGGAGGCACCATTATTCTCTTTTTCTaGTGGCCATTGATACACGTA +
Preference number: 4 (lower is better)
Translates to: GVQIHLLSCHEGYLGGGTIILFF*WPLIHV
Trigger: TACGTGTATCAATGGCCAGCAGAAAAAGAGAATAAT...GGTGCCTCCACCCAAATATCCTTCGTGGCAGGAGAGAAGATGGATCTGAACACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647765.1
CDS-3UTR GCA 90 bp TTGCTGAAGCTGGTATTGAACAGGCTGACTCCAGACATCCTTCAGGCTTCATATTGCCCCTTGACTTTTTaGATACACTCCTCAAAGGCT +
Preference number: 4 (lower is better)
Translates to: LLKLVLNRLTPDILQASYCPLTF*IHSSKA
Trigger: AGCCTTTGAGGAGTGTATGCAAAAAGTCAAGGGGCA...ATATGAAGCCTGAAGGATGTCTGGAGTCAGCCTGTTCAATACCAGCTTCAGCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000445129.1
CDS-3UTR GCA 90 bp AGAGGCCTAATGCAGGATATTGATTGGTTTAATCTAATTATTGCTGAAGCTGGTGTGGTTTCCACTCCATaGGGGTGCACCCACATGTGC +
Preference number: 4 (lower is better)
Translates to: RGLMQDIDWFNLIIAEAGVVSTP*GCTHMC
Trigger: GCACATGTGGGTGCACCCGCATGGAGTGGAAACCAC...ACCAGCTTCAGCAATAATTAGATTAAACCAATCAATATCCTGCATTAGGCCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445129.1
CDS-3UTR GCA 90 bp AACCCCATCAAAAGAACAGGTTTCTTGATCATGGCAAGCTTTGAAGTCAAATATGTGGTTTCCACTCCATaGGGGTGCACCCACATGTGC +
Preference number: 4 (lower is better)
Translates to: NPIKRTGFLIMASFEVKYVVSTP*GCTHMC
Trigger: GCACATGTGGGTGCACCCGCATGGAGTGGAAACCAC...ATATTTGACTTCAAAGCTTGCCATGATCAAGAAACCTGTTCTTTTGATGGGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000647765.1
CDS-3UTR GCA 90 bp CTCCCCCAGATACTATATTCTACTGATCTGAGGGGGTTCACTGCTTACGAGATTATCCATCTTCTCTCCTaGCACGAAGGATATTTGGGT +
Preference number: 4 (lower is better)
Translates to: LPQILYSTDLRGFTAYEIIHLLS*HEGYLG
Trigger: ACCCAAATATCCTTCGTGGCAGGAGAGAAGATGGAT...AATCTCGTAAGCAGTGAACCCCCTCAGATCAGTAGAATATAGTATCTGGGGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR GCA 90 bp AATCTAATTATTGCTGAAGCTGGTATTGAACAGGCTGACTCCAGACATCCTTCACCATACAGGGACACCTaGATGATGTCGCTGGTGTTC +
Preference number: 4 (lower is better)
Translates to: NLIIAEAGIEQADSRHPSPYRDT*MMSLVF
Trigger: GAACACCAGCGACATCATGCAGGTGTCCCTGTATGG...TGAAGGATGTCTGGAGTCAGCCTGTTCAATACCAGCTTCAGCAATAATTAGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445129.1
CDS-3UTR GCA 90 bp TTGCTGAAGCTGGTATTGAACAGGCTGACTCCAGACATCCTTCAGGCTTCATATTTGGTAGGAGAATTCTaGAGGAGCATTGCCAGAAAC +
Preference number: 4 (lower is better)
Translates to: LLKLVLNRLTPDILQASYLVGEF*RSIARN
Trigger: GTTTCTGGCAATGCTCCTGCAGAATTCTCCTACCAA...ATATGAAGCCTGAAGGATGTCTGGAGTCAGCCTGTTCAATACCAGCTTCAGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445129.1
CDS-3UTR GCA 90 bp ATTATTGCTGAAGCTGGTATTGAACAGGCTGACTCCAGACATCCTTCAGGCTTCTGTGTAGTAGAATCCTaGAAAAGCCACAAATGGCCC +
Preference number: 4 (lower is better)
Translates to: IIAEAGIEQADSRHPSGFCVVES*KSHKWP
Trigger: GGGCCATTTGTGGCTTTTGCAGGATTCTACTACACA...GAAGCCTGAAGGATGTCTGGAGTCAGCCTGTTCAATACCAGCTTCAGCAATAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445129.1
CDS-3UTR GCA 90 bp GTAGGATGTTCGTTCTATGACAACATCAAGTATACTTGTGGGAATGGTGACAAACAGACACAGCAAGGCTaGCGCTGTGAAGAAAGCGAG +
Preference number: 4 (lower is better)
Translates to: VGCSFYDNIKYTCGNGDKQTQQG*RCEESE
Trigger: CTCGCTTTCTTCACAGCGGCAGCCTTGCTGTGTCTG...TTTGTCACCATTCCCACAAGTATACTTGATGTTGTCATAGAACGAACATCCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR GCA 90 bp CAGATACTATATTCTACTGATCTGAGGGGGTTCACTGCTTACGAGATTGCTACAAAGGCATGCTCGGAGTaGCTCTTTCTTCTGGTTGCT +
Preference number: 4 (lower is better)
Translates to: QILYSTDLRGFTAYEIATKACSE*LFLLVA
Trigger: AGCAACCAGAAGAAAGAGGCACTCCGAGCATGCCTT...TGTAGCAATCTCGTAAGCAGTGAACCCCCTCAGATCAGTAGAATATAGTATCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR CCA 90 bp GCTGAAGCTGGTATTGAACAGGCTGACTCCAGACATCCTTCAGGCTTCATATCATCTTGCTTGTGGATCTaGATGACAGTGATACTCACA +
Preference number: 4 (lower is better)
Translates to: AEAGIEQADSRHPSGFISSCLWI*MTVILT
Trigger: TGTGAGTATCACTGTCATCCAGATCCACAAGCAAGA...TGATATGAAGCCTGAAGGATGTCTGGAGTCAGCCTGTTCAATACCAGCTTCAGC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445129.1
CDS-3UTR CCA 90 bp AATCATAGAGTAGGATGTTCGTTCTATGACAACATCAAGTATACTTGTGGGAATATGGGGGTGGATCCGTaGAGGTGGGATGGAACCTGC +
Preference number: 4 (lower is better)
Translates to: NHRVGCSFYDNIKYTCGNMGVDP*RWDGTC
Trigger: GCAGGTTCCATCCCACCTCCACGGATCCACCCCCAT...ATTCCCACAAGTATACTTGATGTTGTCATAGAACGAACATCCTACTCTATGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR CCA 90 bp CAGATACTATATTCTACTGATCTGAGGGGGTTCACTGCTTACGAGATTGCTACACGAAGGATATTTGGGTaGAGGCACCACCTAAGTCCA +
Preference number: 4 (lower is better)
Translates to: QILYSTDLRGFTAYEIATRRIFG*RHHLSP
Trigger: TGGACTTAGGTGGTGCCTCCACCCAAATATCCTTCG...TGTAGCAATCTCGTAAGCAGTGAACCCCCTCAGATCAGTAGAATATAGTATCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR CCA 90 bp GTCTCTGAAGAACAATATGCACAGAATAGCCAAGGGATGCCTCAAGAGGTGCTGCAGGGATTGGTGAGATaGTTTTTGGTAGGAGAATTC +
Preference number: 4 (lower is better)
Translates to: VSEEQYAQNSQGMPQEVLQGLVR*FLVGEF
Trigger: GAATTCTCCTACCAAAAACCATCTCACCAATCCCTG...CAGCACCTCTTGAGGCATCCCTTGGCTATTCTGTGCATATTGTTCTTCAGAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR CCA 90 bp CTTCTCTGTTCCCCAATAGATCAGCATGTGGGTAGTGAGGTCTCTGAAGAACAAAGGCTATCAAATACATaGCCCATGGTGAAGCTGATG +
Preference number: 4 (lower is better)
Translates to: LLCSPIDQHVGSEVSEEQRLSNT*PMVKLM
Trigger: CATCAGCTTCACCATGGGCCATGTATTTGATAGCCT...TTGTTCTTCAGAGACCTCACTACCCACATGCTGATCTATTGGGGAACAGAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR CCA 90 bp TTGCTGAAGCTGGTATTGAACAGGCTGACTCCAGACATCCTTCAGGCTTCATATAGGCTATCAAATACATaGCCCATGGTGAAGCTGATG +
Preference number: 4 (lower is better)
Translates to: LLKLVLNRLTPDILQASYRLSNT*PMVKLM
Trigger: CATCAGCTTCACCATGGGCCATGTATTTGATAGCCT...ATATGAAGCCTGAAGGATGTCTGGAGTCAGCCTGTTCAATACCAGCTTCAGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445129.1
CDS-3UTR CCA 90 bp CATAGAGTAGGATGTTCGTTCTATGACAACATCAAGTATACTTGTGGGAATGGTCAGAGGGCTTTCAGCTaGGATCTGGTTGGTCAGGCT +
Preference number: 4 (lower is better)
Translates to: HRVGCSFYDNIKYTCGNGQRAFS*DLVGQA
Trigger: AGCCTGACCAACCAGATCCCAGCTGAAAGCCCTCTG...ACCATTCCCACAAGTATACTTGATGTTGTCATAGAACGAACATCCTACTCTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
3UTR CAA 72 bp ACCCCTAAAGTCAAAGGGCTGGGACTTGAAGTAGCTTaGGATGCTTTCAAGGACTTCATTAGCTGCTGTTTC +
Preference number: 4 (lower is better)
Translates to: TPKVKGLGLEVA*DAFKDFISCCF
Trigger: GAAACAGCAGCTAATGAAGTCCTTGAAAGCATCCAAAGCTACTTCAAGTCCCAGCCCTTTGACTTTAGGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647765.1
CDS-3UTR TCA 90 bp GTAGGATGTTCGTTCTATGACAACATCAAGTATACTTGTGGGAATGGTGACAAAGGCGGGTCAGCACAGTaGACATCTTTTCTCCTAGCT +
Preference number: 4 (lower is better)
Translates to: VGCSFYDNIKYTCGNGDKGGSAQ*TSFLLA
Trigger: AGCTAGGAGAAAAGATGTTCACTGTGCTGACCCGCC...TTTGTCACCATTCCCACAAGTATACTTGATGTTGTCATAGAACGAACATCCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR TCA 90 bp GAGAAAGAGTACCATATGGAAGTTAACACACACACACCCCTTGCAAGTCAAAATAGACCACCAAGGCAATaGTGGTTGGAGTTCGGTAGA +
Preference number: 4 (lower is better)
Translates to: EKEYHMEVNTHTPLASQNRPPRQ*WLEFGR
Trigger: TCTACCGAACTCCAACCATCATTGCCTTGGTGGTCT...ATTTTGACTTGCAAGGGGTGTGTGTGTGTTAACTTCCATATGGTACTCTTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR TCA 90 bp TTGCTGAAGCTGGTATTGAACAGGCTGACTCCAGACATCCTTCAGGCTTCATATCTACATTTGAAGGTTTaGCTGACCACTCCGGTATTA +
Preference number: 4 (lower is better)
Translates to: LLKLVLNRLTPDILQASYLHLKV*LTTPVL
Trigger: TAATACCGGAGTGGTCAGTCAAACCTTCAAATGTAG...ATATGAAGCCTGAAGGATGTCTGGAGTCAGCCTGTTCAATACCAGCTTCAGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445129.1
CDS-3UTR TCA 90 bp TTGCTGAAGCTGGTATTGAACAGGCTGACTCCAGACATCCTTCAGGCTTCATATGATCATGGCAAGCTTTaGAGTCAAATATGGAAGCCA +
Preference number: 4 (lower is better)
Translates to: LLKLVLNRLTPDILQASYDHGKL*SQIWKP
Trigger: TGGCTTCCATATTTGACTTCAAAGCTTGCCATGATC...ATATGAAGCCTGAAGGATGTCTGGAGTCAGCCTGTTCAATACCAGCTTCAGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445129.1
CDS-3UTR TCA 90 bp CAGATACTATATTCTACTGATCTGAGGGGGTTCACTGCTTACGAGATTGCTACACTGACTCCAATTCTGTaGGCAGAAATTCCAGGTGCT +
Preference number: 4 (lower is better)
Translates to: QILYSTDLRGFTAYEIATLTPIL*AEIPGA
Trigger: AGCACCTGGAATTTCTGCTCACAGAATTGGAGTCAG...TGTAGCAATCTCGTAAGCAGTGAACCCCCTCAGATCAGTAGAATATAGTATCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR GCA 90 bp CAGCCCTTTGCTAAGCAAAAGCCTAGCAAAGGCAGTAAAATCTGGAATGCAATAAGGTGGGATGGAACCTaGCCCTTGACTTTTTGCATA +
Preference number: 4 (lower is better)
Translates to: QPFAKQKPSKGSKIWNAIRWDGT*PLTFCI
Trigger: TATGCAAAAAGTCAAGGGGCAGGTTCCATCCCACCT...TATTGCATTCCAGATTTTACTGCCTTTGCTAGGCTTTTGCTTAGCAAAGGGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR GCA 90 bp GTAGGATGTTCGTTCTATGACAACATCAAGTATACTTGTGGGAATGGTGACAAACCATACAGGGACACCTaGATGATGTCGCTGGTGTTC +
Preference number: 4 (lower is better)
Translates to: VGCSFYDNIKYTCGNGDKPYRDT*MMSLVF
Trigger: GAACACCAGCGACATCATGCAGGTGTCCCTGTATGG...TTTGTCACCATTCCCACAAGTATACTTGATGTTGTCATAGAACGAACATCCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR GCA 90 bp AACCCCATCAAAAGAACAGGTTTCTTGATCATGGCAAGCTTTGAAGTCAAATATCAGACACAGCAAGGCTaGCGCTGTGAAGAAAGCGAG +
Preference number: 4 (lower is better)
Translates to: NPIKRTGFLIMASFEVKYQTQQG*RCEESE
Trigger: CTCGCTTTCTTCACAGCGGCAGCCTTGCTGTGTCTG...ATATTTGACTTCAAAGCTTGCCATGATCAAGAAACCTGTTCTTTTGATGGGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647765.1
CDS-3UTR GCA 90 bp AGAACAGGTTTCTTGATCATGGCAAGCTTTGAAGTCAAATATGGAAGCCACCTTCAGGTATGCAAGAAATaGCAGACACAGCAAGGCTGC +
Preference number: 4 (lower is better)
Translates to: RTGFLIMASFEVKYGSHLQVCKK*QTQQGC
Trigger: GCAGCCTTGCTGTGTCTGGCATTTCTTGCATACCTG...AAGGTGGCTTCCATATTTGACTTCAAAGCTTGCCATGATCAAGAAACCTGTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647765.1
CDS-3UTR GCA 90 bp CAGATACTATATTCTACTGATCTGAGGGGGTTCACTGCTTACGAGATTGCTACATCAGTCAGAATCCACTaGATGGTCAAAGGCATGCTC +
Preference number: 4 (lower is better)
Translates to: QILYSTDLRGFTAYEIATSVRIH*MVKGML
Trigger: GAGCATGCCTTTGACCATGCAGTGGATTCTGACTGA...TGTAGCAATCTCGTAAGCAGTGAACCCCCTCAGATCAGTAGAATATAGTATCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR GCA 90 bp CAGCCCTTTGCTAAGCAAAAGCCTAGCAAAGGCAGTAAAATCTGGAATGCAATATCTGAGGGGGTTCACTaGTTACGAGATTGCTACAAG +
Preference number: 4 (lower is better)
Translates to: QPFAKQKPSKGSKIWNAISEGVH*LRDCYK
Trigger: CTTGTAGCAATCTCGTAAGCAGTGAACCCCCTCAGA...TATTGCATTCCAGATTTTACTGCCTTTGCTAGGCTTTTGCTTAGCAAAGGGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR GCA 90 bp GTCTCTGAAGAACAATATGCACAGAATAGCCAAGGGATGCCTCAAGAGGTGCTGTGTAGCCATTGGATTTaGTGGAGTTCTTTCTCATTC +
Preference number: 4 (lower is better)
Translates to: VSEEQYAQNSQGMPQEVLCSHWI*WSSFSF
Trigger: GAATGAGAAAGAACTCCAGCAAATCCAATGGCTACA...CAGCACCTCTTGAGGCATCCCTTGGCTATTCTGTGCATATTGTTCTTCAGAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR CCA 90 bp GAGAAAGAGTACCATATGGAAGTTAACACACACACACCCCTTGCAAGTCAAAATACCATACTTCAGTCCTaGAGGGAGGACCTCTTGCTT +
Preference number: 4 (lower is better)
Translates to: EKEYHMEVNTHTPLASQNTILQS*REDLLL
Trigger: AAGCAAGAGGTCCTCCCTCCAGGACTGAAGTATGGT...ATTTTGACTTGCAAGGGGTGTGTGTGTGTTAACTTCCATATGGTACTCTTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301825.8
CDS-3UTR CCA 90 bp CAGATACTATATTCTACTGATCTGAGGGGGTTCACTGCTTACGAGATTGCTACAGATACACGTAGACTGTaGTTCTTGAAGACCCGGCAT +
Preference number: 4 (lower is better)
Translates to: QILYSTDLRGFTAYEIATDTRRL*FLKTRH
Trigger: ATGCCGGGTCTTCAAGAACCACAGTCTACGTGTATC...TGTAGCAATCTCGTAAGCAGTGAACCCCCTCAGATCAGTAGAATATAGTATCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR CCA 90 bp ATTATTGCTGAAGCTGGTATTGAACAGGCTGACTCCAGACATCCTTCAGGCTTCGGTTATTTCCATAGCTaGAGATTCCAGAGCCTTTCA +
Preference number: 4 (lower is better)
Translates to: IIAEAGIEQADSRHPSGFGYFHS*RFQSLS
Trigger: TGAAAGGCTCTGGAATCTCCAGCTATGGAAATAACC...GAAGCCTGAAGGATGTCTGGAGTCAGCCTGTTCAATACCAGCTTCAGCAATAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445129.1
CDS-3UTR CCA 90 bp AGAGGCCTAATGCAGGATATTGATTGGTTTAATCTAATTATTGCTGAAGCTGGTTCCGTGGAGGTGGGATaGAACCTGCCCCTTGACTTT +
Preference number: 4 (lower is better)
Translates to: RGLMQDIDWFNLIIAEAGSVEVG*NLPLDF
Trigger: AAAGTCAAGGGGCAGGTTCCATCCCACCTCCACGGA...ACCAGCTTCAGCAATAATTAGATTAAACCAATCAATATCCTGCATTAGGCCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445129.1
CDS-3UTR CCA 90 bp GAGAAAGAGTACCATATGGAAGTTAACACACACACACCCCTTGCAAGTCAAAATCGAAGGATATTTGGGTaGAGGCACCACCTAAGTCCA +
Preference number: 4 (lower is better)
Translates to: EKEYHMEVNTHTPLASQNRRIFG*RHHLSP
Trigger: TGGACTTAGGTGGTGCCTCCACCCAAATATCCTTCG...ATTTTGACTTGCAAGGGGTGTGTGTGTGTTAACTTCCATATGGTACTCTTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR CCA 90 bp AAGACCTATGACTACTATGCAGAGAGGTCTATGATCTGGGAAAGTAATTGGTTAGCCACGAAGGATATTTaGGTGGAGGCACCACCTAAG +
Preference number: 4 (lower is better)
Translates to: KTYDYYAERSMIWESNWLATKDI*VEAPPK
Trigger: CTTAGGTGGTGCCTCCACCCAAATATCCTTCGTGGC...TAACCAATTACTTTCCCAGATCATAGACCTCTCTGCATAGTAGTCATAGGTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR CCA 90 bp AATCTAATTATTGCTGAAGCTGGTATTGAACAGGCTGACTCCAGACATCCTTCAGGGGTTATAACTTTCTaGCCTCTGGTCCACAGTGCA +
Preference number: 4 (lower is better)
Translates to: NLIIAEAGIEQADSRHPSGVITF*PLVHSA
Trigger: TGCACTGTGGACCAGAGGCCAGAAAGTTATAACCCC...TGAAGGATGTCTGGAGTCAGCCTGTTCAATACCAGCTTCAGCAATAATTAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445129.1
CDS-3UTR CCA 90 bp CAGATACTATATTCTACTGATCTGAGGGGGTTCACTGCTTACGAGATTGCTACACTCCTTACACAGAGATaGGTCCCCAGTTCCTTCAAA +
Preference number: 4 (lower is better)
Translates to: QILYSTDLRGFTAYEIATLLTQR*VPSSFK
Trigger: TTTGAAGGAACTGGGGACCCATCTCTGTGTAAGGAG...TGTAGCAATCTCGTAAGCAGTGAACCCCCTCAGATCAGTAGAATATAGTATCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR CCA 90 bp TTGCTGAAGCTGGTATTGAACAGGCTGACTCCAGACATCCTTCAGGCTTCATATTGCAAAAGCCACAAATaGCCCTTTAATCTTTGGCTG +
Preference number: 4 (lower is better)
Translates to: LLKLVLNRLTPDILQASYCKSHK*PFNLWL
Trigger: CAGCCAAAGATTAAAGGGCCATTTGTGGCTTTTGCA...ATATGAAGCCTGAAGGATGTCTGGAGTCAGCCTGTTCAATACCAGCTTCAGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445129.1
CDS-3UTR CCA 90 bp GTAGGATGTTCGTTCTATGACAACATCAAGTATACTTGTGGGAATGGTGACAAAGCCCACAAAGACAGGTaGTTCTATGGGCAGACGGAT +
Preference number: 4 (lower is better)
Translates to: VGCSFYDNIKYTCGNGDKAHKDR*FYGQTD
Trigger: ATCCGTCTGCCCATAGAACCACCTGTCTTTGTGGGC...TTTGTCACCATTCCCACAAGTATACTTGATGTTGTCATAGAACGAACATCCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR TCA 90 bp ATCAAAAGAACAGGTTTCTTGATCATGGCAAGCTTTGAAGTCAAATATGGAAGCGGCGGGTCAGCACAGTaGACATCTTTTCTCCTAGCT +
Preference number: 4 (lower is better)
Translates to: IKRTGFLIMASFEVKYGSGGSAQ*TSFLLA
Trigger: AGCTAGGAGAAAAGATGTTCACTGTGCTGACCCGCC...GCTTCCATATTTGACTTCAAAGCTTGCCATGATCAAGAAACCTGTTCTTTTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647765.1
CDS-3UTR TCA 90 bp AATCTAATTATTGCTGAAGCTGGTATTGAACAGGCTGACTCCAGACATCCTTCAATGGAACCTGCCCCTTaGCTTTTTGCATACACTCCT +
Preference number: 4 (lower is better)
Translates to: NLIIAEAGIEQADSRHPSMEPAP*LFAYTP
Trigger: AGGAGTGTATGCAAAAAGTCAAGGGGCAGGTTCCAT...TGAAGGATGTCTGGAGTCAGCCTGTTCAATACCAGCTTCAGCAATAATTAGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000445129.1
CDS-3UTR TCA 90 bp CTTCTCTGTTCCCCAATAGATCAGCATGTGGGTAGTGAGGTCTCTGAAGAACAATATTTGAGAGGCACGTaGCCTAGGTGTTTGATTTTA +
Preference number: 4 (lower is better)
Translates to: LLCSPIDQHVGSEVSEEQYLRGT*PRCLIL
Trigger: TAAAATCAAACACCTAGGTCACGTGCCTCTCAAATA...TTGTTCTTCAGAGACCTCACTACCCACATGCTGATCTATTGGGGAACAGAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR GCA 90 bp AATCTAATTATTGCTGAAGCTGGTATTGAACAGGCTGACTCCAGACATCCTTCAAGGTGGGATGGAACCTaGCCCTTGACTTTTTGCATA +
Preference number: 4 (lower is better)
Translates to: NLIIAEAGIEQADSRHPSRWDGT*PLTFCI
Trigger: TATGCAAAAAGTCAAGGGGCAGGTTCCATCCCACCT...TGAAGGATGTCTGGAGTCAGCCTGTTCAATACCAGCTTCAGCAATAATTAGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445129.1
CDS-3UTR GCA 90 bp AAGACCTATGACTACTATGCAGAGAGGTCTATGATCTGGGAAAGTAATTGGTTAAAGGCATGCTCGGAGTaGCTCTTTCTTCTGGTTGCT +
Preference number: 4 (lower is better)
Translates to: KTYDYYAERSMIWESNWLKACSE*LFLLVA
Trigger: AGCAACCAGAAGAAAGAGGCACTCCGAGCATGCCTT...TAACCAATTACTTTCCCAGATCATAGACCTCTCTGCATAGTAGTCATAGGTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR GCA 90 bp AAGACCTATGACTACTATGCAGAGAGGTCTATGATCTGGGAAAGTAATTGGTTAGCATGGTCAAAGGCATaGTCGGAGTGCCTCTTTCTT +
Preference number: 4 (lower is better)
Translates to: KTYDYYAERSMIWESNWLAWSKA*SECLFL
Trigger: AAGAAAGAGGCACTCCGAGCATGCCTTTGACCATGC...TAACCAATTACTTTCCCAGATCATAGACCTCTCTGCATAGTAGTCATAGGTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR GCA 90 bp ATCAAAAGAACAGGTTTCTTGATCATGGCAAGCTTTGAAGTCAAATATGGAAGCAGAATAGCCAAGGGATaGCTCAAGAGGTGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: IKRTGFLIMASFEVKYGSRIAKG*LKRCCG
Trigger: GCCACAGCACCTCTTGAGGCATCCCTTGGCTATTCT...GCTTCCATATTTGACTTCAAAGCTTGCCATGATCAAGAAACCTGTTCTTTTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647765.1
CDS-3UTR GCA 90 bp GAGAAAGAGTACCATATGGAAGTTAACACACACACACCCCTTGCAAGTCAAAATTCTGAGGGGGTTCACTaGTTACGAGATTGCTACAAG +
Preference number: 4 (lower is better)
Translates to: EKEYHMEVNTHTPLASQNSEGVH*LRDCYK
Trigger: CTTGTAGCAATCTCGTAAGCAGTGAACCCCCTCAGA...ATTTTGACTTGCAAGGGGTGTGTGTGTGTTAACTTCCATATGGTACTCTTTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR CCA 90 bp AAGACCTATGACTACTATGCAGAGAGGTCTATGATCTGGGAAAGTAATTGGTTACAAGGCAATGATGGTTaGAGTTCGGTAGAGGGCCTT +
Preference number: 4 (lower is better)
Translates to: KTYDYYAERSMIWESNWLQGNDG*SSVEGL
Trigger: AAGGCCCTCTACCGAACTCCAACCATCATTGCCTTG...TAACCAATTACTTTCCCAGATCATAGACCTCTCTGCATAGTAGTCATAGGTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR CCA 90 bp GAGAAAGAGTACCATATGGAAGTTAACACACACACACCCCTTGCAAGTCAAAATGATACACGTAGACTGTaGTTCTTGAAGACCCGGCAT +
Preference number: 4 (lower is better)
Translates to: EKEYHMEVNTHTPLASQNDTRRL*FLKTRH
Trigger: ATGCCGGGTCTTCAAGAACCACAGTCTACGTGTATC...ATTTTGACTTGCAAGGGGTGTGTGTGTGTTAACTTCCATATGGTACTCTTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR CCA 90 bp AACCCCATCAAAAGAACAGGTTTCTTGATCATGGCAAGCTTTGAAGTCAAATATGCCACGAAGGATATTTaGGTGGAGGCACCACCTAAG +
Preference number: 4 (lower is better)
Translates to: NPIKRTGFLIMASFEVKYATKDI*VEAPPK
Trigger: CTTAGGTGGTGCCTCCACCCAAATATCCTTCGTGGC...ATATTTGACTTCAAAGCTTGCCATGATCAAGAAACCTGTTCTTTTGATGGGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647765.1
CDS-3UTR CCA 90 bp CATAGAGTAGGATGTTCGTTCTATGACAACATCAAGTATACTTGTGGGAATGGTGGGGTTATAACTTTCTaGCCTCTGGTCCACAGTGCA +
Preference number: 4 (lower is better)
Translates to: HRVGCSFYDNIKYTCGNGGVITF*PLVHSA
Trigger: TGCACTGTGGACCAGAGGCCAGAAAGTTATAACCCC...ACCATTCCCACAAGTATACTTGATGTTGTCATAGAACGAACATCCTACTCTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR CCA 90 bp AATCTAATTATTGCTGAAGCTGGTATTGAACAGGCTGACTCCAGACATCCTTCACTCCTTACACAGAGATaGGTCCCCAGTTCCTTCAAA +
Preference number: 4 (lower is better)
Translates to: NLIIAEAGIEQADSRHPSLLTQR*VPSSFK
Trigger: TTTGAAGGAACTGGGGACCCATCTCTGTGTAAGGAG...TGAAGGATGTCTGGAGTCAGCCTGTTCAATACCAGCTTCAGCAATAATTAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445129.1
CDS-3UTR CCA 90 bp GTGAGGTCTCTGAAGAACAATATGCACAGAATAGCCAAGGGATGCCTCAAGAGGAAAGATTTAAAGCACTaGCTGTGTAGTAGAATCCTG +
Preference number: 4 (lower is better)
Translates to: VRSLKNNMHRIAKGCLKRKDLKH*LCSRIL
Trigger: CAGGATTCTACTACACAGCCAGTGCTTTAAATCTTT...CCTCTTGAGGCATCCCTTGGCTATTCTGTGCATATTGTTCTTCAGAGACCTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR CCA 90 bp GTGAGGTCTCTGAAGAACAATATGCACAGAATAGCCAAGGGATGCCTCAAGAGGTTAGTTTGTAGCCATTaGATTTGCTGGAGTTCTTTC +
Preference number: 4 (lower is better)
Translates to: VRSLKNNMHRIAKGCLKRLVCSH*ICWSSF
Trigger: GAAAGAACTCCAGCAAATCCAATGGCTACAAACTAA...CCTCTTGAGGCATCCCTTGGCTATTCTGTGCATATTGTTCTTCAGAGACCTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR CCA 90 bp GTCTCTGAAGAACAATATGCACAGAATAGCCAAGGGATGCCTCAAGAGGTGCTGTTAGTTTGTAGCCATTaGATTTGCTGGAGTTCTTTC +
Preference number: 4 (lower is better)
Translates to: VSEEQYAQNSQGMPQEVLLVCSH*ICWSSF
Trigger: GAAAGAACTCCAGCAAATCCAATGGCTACAAACTAA...CAGCACCTCTTGAGGCATCCCTTGGCTATTCTGTGCATATTGTTCTTCAGAGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR CCA 90 bp GAGAAAGAGTACCATATGGAAGTTAACACACACACACCCCTTGCAAGTCAAAATTCCCTTCCCTCCATTTaGGATCTCCATTCAGAACTC +
Preference number: 4 (lower is better)
Translates to: EKEYHMEVNTHTPLASQNSLPSI*DLHSEL
Trigger: GAGTTCTGAATGGAGATCCCAAATGGAGGGAAGGGA...ATTTTGACTTGCAAGGGGTGTGTGTGTGTTAACTTCCATATGGTACTCTTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647765.1
CDS-3UTR TCA 90 bp GTAGGATGTTCGTTCTATGACAACATCAAGTATACTTGTGGGAATGGTGACAAAATGGAACCTGCCCCTTaGCTTTTTGCATACACTCCT +
Preference number: 4 (lower is better)
Translates to: VGCSFYDNIKYTCGNGDKMEPAP*LFAYTP
Trigger: AGGAGTGTATGCAAAAAGTCAAGGGGCAGGTTCCAT...TTTGTCACCATTCCCACAAGTATACTTGATGTTGTCATAGAACGAACATCCTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR TCA 90 bp GAGAAAGAGTACCATATGGAAGTTAACACACACACACCCCTTGCAAGTCAAAATTGCCCAGAAATGATTTaGGCACCCCTAAAGTCAAAG +
Preference number: 4 (lower is better)
Translates to: EKEYHMEVNTHTPLASQNCPEMI*APLKSK
Trigger: CTTTGACTTTAGGGGTGCTCAAATCATTTCTGGGCA...ATTTTGACTTGCAAGGGGTGTGTGTGTGTTAACTTCCATATGGTACTCTTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR TCA 90 bp AAGACCTATGACTACTATGCAGAGAGGTCTATGATCTGGGAAAGTAATTGGTTAGTTAGTTGTATTTCCTaGAGGCAGCCACTTCACCTG +
Preference number: 4 (lower is better)
Translates to: KTYDYYAERSMIWESNWLVSCIS*RQPLHL
Trigger: CAGGTGAAGTGGCTGCCTTCAGGAAATACAACTAAC...TAACCAATTACTTTCCCAGATCATAGACCTCTCTGCATAGTAGTCATAGGTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR TCA 90 bp AAGACCTATGACTACTATGCAGAGAGGTCTATGATCTGGGAAAGTAATTGGTTAGAGGGAAATGGAAACTaGGCCCTGAGGTCAATTCTT +
Preference number: 4 (lower is better)
Translates to: KTYDYYAERSMIWESNWLEGNGN*ALRSIL
Trigger: AAGAATTGACCTCAGGGCTCAGTTTCCATTTCCCTC...TAACCAATTACTTTCCCAGATCATAGACCTCTCTGCATAGTAGTCATAGGTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR TCA 90 bp GAGAAAGAGTACCATATGGAAGTTAACACACACACACCCCTTGCAAGTCAAAATGATACTATATTCTACTaGTCTGAGGGGGTTCACTGC +
Preference number: 4 (lower is better)
Translates to: EKEYHMEVNTHTPLASQNDTIFY*SEGVHC
Trigger: GCAGTGAACCCCCTCAGATCAGTAGAATATAGTATC...ATTTTGACTTGCAAGGGGTGTGTGTGTGTTAACTTCCATATGGTACTCTTTCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR TCA 90 bp CTTCTCTGTTCCCCAATAGATCAGCATGTGGGTAGTGAGGTCTCTGAAGAACAAAGGATGTTCGTTCTATaGCAACATCAAGTATACTTG +
Preference number: 4 (lower is better)
Translates to: LLCSPIDQHVGSEVSEEQRMFVL*QHQVYL
Trigger: CAAGTATACTTGATGTTGTCATAGAACGAACATCCT...TTGTTCTTCAGAGACCTCACTACCCACATGCTGATCTATTGGGGAACAGAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR TCA 90 bp CTCCCCCAGATACTATATTCTACTGATCTGAGGGGGTTCACTGCTTACGAGATTAGGATGTTCGTTCTATaGCAACATCAAGTATACTTG +
Preference number: 4 (lower is better)
Translates to: LPQILYSTDLRGFTAYEIRMFVL*QHQVYL
Trigger: CAAGTATACTTGATGTTGTCATAGAACGAACATCCT...AATCTCGTAAGCAGTGAACCCCCTCAGATCAGTAGAATATAGTATCTGGGGGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR TCA 90 bp AGAGGCCTAATGCAGGATATTGATTGGTTTAATCTAATTATTGCTGAAGCTGGTTCTCCTAGCTGCAGGTaGGAGAATACAGGATGTCAG +
Preference number: 4 (lower is better)
Translates to: RGLMQDIDWFNLIIAEAGSPSCR*ENTGCQ
Trigger: CTGACATCCTGTATTCTCTCACCTGCAGCTAGGAGA...ACCAGCTTCAGCAATAATTAGATTAAACCAATCAATATCCTGCATTAGGCCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445129.1
CDS-3UTR GCA 90 bp CATAGAGTAGGATGTTCGTTCTATGACAACATCAAGTATACTTGTGGGAATGGTCAAGAGACCAGGCTATaGTGCTATTCCCCACTTCTT +
Preference number: 4 (lower is better)
Translates to: HRVGCSFYDNIKYTCGNGQETRL*CYSPLL
Trigger: AAGAAGTGGGGAATAGCAGCATAGCCTGGTCTCTTG...ACCATTCCCACAAGTATACTTGATGTTGTCATAGAACGAACATCCTACTCTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR GCA 90 bp CTTCTCTGTTCCCCAATAGATCAGCATGTGGGTAGTGAGGTCTCTGAAGAACAACACTGCTTACGAGATTaGTACAAGAAAGTCTTAGTT +
Preference number: 4 (lower is better)
Translates to: LLCSPIDQHVGSEVSEEQHCLRD*YKKVLV
Trigger: AACTAAGACTTTCTTGTAGCAATCTCGTAAGCAGTG...TTGTTCTTCAGAGACCTCACTACCCACATGCTGATCTATTGGGGAACAGAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR CCA 90 bp AGAGGCCTAATGCAGGATATTGATTGGTTTAATCTAATTATTGCTGAAGCTGGTCAAGGCAATGATGGTTaGAGTTCGGTAGAGGGCCTT +
Preference number: 4 (lower is better)
Translates to: RGLMQDIDWFNLIIAEAGQGNDG*SSVEGL
Trigger: AAGGCCCTCTACCGAACTCCAACCATCATTGCCTTG...ACCAGCTTCAGCAATAATTAGATTAAACCAATCAATATCCTGCATTAGGCCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445129.1
CDS-3UTR CCA 90 bp AGAGGCCTAATGCAGGATATTGATTGGTTTAATCTAATTATTGCTGAAGCTGGTACTCCTCAAAGGCTCTaGGGACATCTTGGGGGTTAT +
Preference number: 4 (lower is better)
Translates to: RGLMQDIDWFNLIIAEAGTPQRL*GHLGGY
Trigger: ATAACCCCCAAGATGTCCCCAGAGCCTTTGAGGAGT...ACCAGCTTCAGCAATAATTAGATTAAACCAATCAATATCCTGCATTAGGCCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445129.1
CDS-3UTR CCA 90 bp AGAGGCCTAATGCAGGATATTGATTGGTTTAATCTAATTATTGCTGAAGCTGGTCGAAGGATATTTGGGTaGAGGCACCACCTAAGTCCA +
Preference number: 4 (lower is better)
Translates to: RGLMQDIDWFNLIIAEAGRRIFG*RHHLSP
Trigger: TGGACTTAGGTGGTGCCTCCACCCAAATATCCTTCG...ACCAGCTTCAGCAATAATTAGATTAAACCAATCAATATCCTGCATTAGGCCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445129.1
CDS-3UTR CCA 90 bp GAGAAAGAGTACCATATGGAAGTTAACACACACACACCCCTTGCAAGTCAAAATCCTCAAGAGGTGCTGTaGCAGAAATCAGTATTTGAG +
Preference number: 4 (lower is better)
Translates to: EKEYHMEVNTHTPLASQNPQEVL*QKSVFE
Trigger: CTCAAATACTGATTTCTGCCACAGCACCTCTTGAGG...ATTTTGACTTGCAAGGGGTGTGTGTGTGTTAACTTCCATATGGTACTCTTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR TCA 90 bp GAGAAAGAGTACCATATGGAAGTTAACACACACACACCCCTTGCAAGTCAAAATCTACATTTGAAGGTTTaGCTGACCACTCCGGTATTA +
Preference number: 4 (lower is better)
Translates to: EKEYHMEVNTHTPLASQNLHLKV*LTTPVL
Trigger: TAATACCGGAGTGGTCAGTCAAACCTTCAAATGTAG...ATTTTGACTTGCAAGGGGTGTGTGTGTGTTAACTTCCATATGGTACTCTTTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR TCA 90 bp AGAGGCCTAATGCAGGATATTGATTGGTTTAATCTAATTATTGCTGAAGCTGGTCTGACTCCAATTCTGTaGGCAGAAATTCCAGGTGCT +
Preference number: 4 (lower is better)
Translates to: RGLMQDIDWFNLIIAEAGLTPIL*AEIPGA
Trigger: AGCACCTGGAATTTCTGCTCACAGAATTGGAGTCAG...ACCAGCTTCAGCAATAATTAGATTAAACCAATCAATATCCTGCATTAGGCCTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445129.1
CDS-3UTR TCA 90 bp GTAGGATGTTCGTTCTATGACAACATCAAGTATACTTGTGGGAATGGTGACAAACAAAGTCAAGACCTATaGCTACTATGCAGAGAGGTC +
Preference number: 4 (lower is better)
Translates to: VGCSFYDNIKYTCGNGDKQSQDL*LLCREV
Trigger: GACCTCTCTGCATAGTAGTCATAGGTCTTGACTTTG...TTTGTCACCATTCCCACAAGTATACTTGATGTTGTCATAGAACGAACATCCTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR GCA 90 bp CTCCCCCAGATACTATATTCTACTGATCTGAGGGGGTTCACTGCTTACGAGATTATTATTCTCTTTTTCTaGTGGCCATTGATACACGTA +
Preference number: 4 (lower is better)
Translates to: LPQILYSTDLRGFTAYEIIILFF*WPLIHV
Trigger: TACGTGTATCAATGGCCAGCAGAAAAAGAGAATAAT...AATCTCGTAAGCAGTGAACCCCCTCAGATCAGTAGAATATAGTATCTGGGGGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR GCA 90 bp TTGCTGAAGCTGGTATTGAACAGGCTGACTCCAGACATCCTTCAGGCTTCATATATTATTCTCTTTTTCTaGTGGCCATTGATACACGTA +
Preference number: 4 (lower is better)
Translates to: LLKLVLNRLTPDILQASYIILFF*WPLIHV
Trigger: TACGTGTATCAATGGCCAGCAGAAAAAGAGAATAAT...ATATGAAGCCTGAAGGATGTCTGGAGTCAGCCTGTTCAATACCAGCTTCAGCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445129.1
CDS-3UTR GCA 90 bp CATAGAGTAGGATGTTCGTTCTATGACAACATCAAGTATACTTGTGGGAATGGTATCCATCTTCTCTCCTaGCACGAAGGATATTTGGGT +
Preference number: 4 (lower is better)
Translates to: HRVGCSFYDNIKYTCGNGIHLLS*HEGYLG
Trigger: ACCCAAATATCCTTCGTGGCAGGAGAGAAGATGGAT...ACCATTCCCACAAGTATACTTGATGTTGTCATAGAACGAACATCCTACTCTATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR GCA 90 bp AAAAGCTACCTGAAAGATTTAAAGCACTGGCTGTGTAGTAGAATCCTGCAAAAGTGTGTAGTAGAATCCTaGAAAAGCCACAAATGGCCC +
Preference number: 4 (lower is better)
Translates to: KSYLKDLKHWLCSRILQKCVVES*KSHKWP
Trigger: GGGCCATTTGTGGCTTTTGCAGGATTCTACTACACA...CTTTTGCAGGATTCTACTACACAGCCAGTGCTTTAAATCTTTCAGGTAGCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000647765.1
CDS-3UTR CCA 90 bp AATCATAGAGTAGGATGTTCGTTCTATGACAACATCAAGTATACTTGTGGGAATCAAGGCAATGATGGTTaGAGTTCGGTAGAGGGCCTT +
Preference number: 4 (lower is better)
Translates to: NHRVGCSFYDNIKYTCGNQGNDG*SSVEGL
Trigger: AAGGCCCTCTACCGAACTCCAACCATCATTGCCTTG...ATTCCCACAAGTATACTTGATGTTGTCATAGAACGAACATCCTACTCTATGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR CCA 90 bp GAGAAAGAGTACCATATGGAAGTTAACACACACACACCCCTTGCAAGTCAAAATTCTTGCTTGTGGATCTaGATGACAGTGATACTCACA +
Preference number: 4 (lower is better)
Translates to: EKEYHMEVNTHTPLASQNSCLWI*MTVILT
Trigger: TGTGAGTATCACTGTCATCCAGATCCACAAGCAAGA...ATTTTGACTTGCAAGGGGTGTGTGTGTGTTAACTTCCATATGGTACTCTTTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR CCA 90 bp AATCTAATTATTGCTGAAGCTGGTATTGAACAGGCTGACTCCAGACATCCTTCACAGGGATTGGTGAGATaGTTTTTGGTAGGAGAATTC +
Preference number: 4 (lower is better)
Translates to: NLIIAEAGIEQADSRHPSQGLVR*FLVGEF
Trigger: GAATTCTCCTACCAAAAACCATCTCACCAATCCCTG...TGAAGGATGTCTGGAGTCAGCCTGTTCAATACCAGCTTCAGCAATAATTAGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445129.1
CDS-3UTR CCA 90 bp CAGATACTATATTCTACTGATCTGAGGGGGTTCACTGCTTACGAGATTGCTACATGGCCCTTTAATCTTTaGCTGATAAACCCCATCAAA +
Preference number: 4 (lower is better)
Translates to: QILYSTDLRGFTAYEIATWPFNL*LINPIK
Trigger: TTTGATGGGGTTTATCAGCCAAAGATTAAAGGGCCA...TGTAGCAATCTCGTAAGCAGTGAACCCCCTCAGATCAGTAGAATATAGTATCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR CCA 90 bp GAGAAAGAGTACCATATGGAAGTTAACACACACACACCCCTTGCAAGTCAAAATTTTTCAAAGTGTATTTaGGGCCAAGTCTCCTCTGTG +
Preference number: 4 (lower is better)
Translates to: EKEYHMEVNTHTPLASQNFSKCI*GQVSSV
Trigger: CACAGAGGAGACTTGGCCCCAAATACACTTTGAAAA...ATTTTGACTTGCAAGGGGTGTGTGTGTGTTAACTTCCATATGGTACTCTTTCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR CCA 90 bp TTGCCCAGAAATGATTTGAGCACCCCTAAAGTCAAAGGGCTGGGACTTGAAGTAATCAATGTGTTTTTATaGGAGGGCATAGCAATACAA +
Preference number: 4 (lower is better)
Translates to: LPRNDLSTPKVKGLGLEVINVFL*EGIAIQ
Trigger: TTGTATTGCTATGCCCTCCCATAAAAACACATTGAT...TACTTCAAGTCCCAGCCCTTTGACTTTAGGGGTGCTCAAATCATTTCTGGGCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647765.1
CDS-3UTR TCA 90 bp GAGAAAGAGTACCATATGGAAGTTAACACACACACACCCCTTGCAAGTCAAAATAAAGAACAGGTTTCTTaGTCATGGCAAGCTTTGAAG +
Preference number: 4 (lower is better)
Translates to: EKEYHMEVNTHTPLASQNKEQVS*SWQALK
Trigger: CTTCAAAGCTTGCCATGATCAAGAAACCTGTTCTTT...ATTTTGACTTGCAAGGGGTGTGTGTGTGTTAACTTCCATATGGTACTCTTTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR TCA 90 bp AGAACAGGTTTCTTGATCATGGCAAGCTTTGAAGTCAAATATGGAAGCCACCTTAAAGAACAGGTTTCTTaGTCATGGCAAGCTTTGAAG +
Preference number: 4 (lower is better)
Translates to: RTGFLIMASFEVKYGSHLKEQVS*SWQALK
Trigger: CTTCAAAGCTTGCCATGATCAAGAAACCTGTTCTTT...AAGGTGGCTTCCATATTTGACTTCAAAGCTTGCCATGATCAAGAAACCTGTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647765.1
CDS-3UTR TCA 90 bp AATCATAGAGTAGGATGTTCGTTCTATGACAACATCAAGTATACTTGTGGGAATGCAGAAATCAGTATTTaGGAGGCACGTGACCTAGGT +
Preference number: 4 (lower is better)
Translates to: NHRVGCSFYDNIKYTCGNAEISI*EARDLG
Trigger: ACCTAGGTCACGTGCCTCTCAAATACTGATTTCTGC...ATTCCCACAAGTATACTTGATGTTGTCATAGAACGAACATCCTACTCTATGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR TCA 90 bp CATAGAGTAGGATGTTCGTTCTATGACAACATCAAGTATACTTGTGGGAATGGTATGGAAACTGAGCCCTaGGGTCAATTCTTCAACATT +
Preference number: 4 (lower is better)
Translates to: HRVGCSFYDNIKYTCGNGMETEP*GQFFNI
Trigger: AATGTTGAAGAATTGACCTCAGGGCTCAGTTTCCAT...ACCATTCCCACAAGTATACTTGATGTTGTCATAGAACGAACATCCTACTCTATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR TCA 90 bp GTAGGATGTTCGTTCTATGACAACATCAAGTATACTTGTGGGAATGGTGACAAAATGCAGAGAGGTCTATaGTCTGGGAAAGTAATTGGT +
Preference number: 4 (lower is better)
Translates to: VGCSFYDNIKYTCGNGDKMQRGL*SGKVIG
Trigger: ACCAATTACTTTCCCAGATCATAGACCTCTCTGCAT...TTTGTCACCATTCCCACAAGTATACTTGATGTTGTCATAGAACGAACATCCTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR GCA 90 bp AATCATAGAGTAGGATGTTCGTTCTATGACAACATCAAGTATACTTGTGGGAATGCCTCTGGTCCACAGTaGACAGGCTATCAAATACAT +
Preference number: 4 (lower is better)
Translates to: NHRVGCSFYDNIKYTCGNASGPQ*TGYQIH
Trigger: ATGTATTTGATAGCCTGTGCACTGTGGACCAGAGGC...ATTCCCACAAGTATACTTGATGTTGTCATAGAACGAACATCCTACTCTATGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR GCA 90 bp AATCATAGAGTAGGATGTTCGTTCTATGACAACATCAAGTATACTTGTGGGAATGGATGCCTCAAGAGGTaGTGTGGCAGAAATCAGTAT +
Preference number: 4 (lower is better)
Translates to: NHRVGCSFYDNIKYTCGNGCLKR*CGRNQY
Trigger: ATACTGATTTCTGCCACAGCACCTCTTGAGGCATCC...ATTCCCACAAGTATACTTGATGTTGTCATAGAACGAACATCCTACTCTATGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR GCA 90 bp AATCATAGAGTAGGATGTTCGTTCTATGACAACATCAAGTATACTTGTGGGAATGACAAACACACAGGTTaGAATCTAGTGACCAGAGCC +
Preference number: 4 (lower is better)
Translates to: NHRVGCSFYDNIKYTCGNDKHTG*NLVTRA
Trigger: GGCTCTGGTCACTAGATTGCAACCTGTGTGTTTGTC...ATTCCCACAAGTATACTTGATGTTGTCATAGAACGAACATCCTACTCTATGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR GCA 90 bp AATCTAATTATTGCTGAAGCTGGTATTGAACAGGCTGACTCCAGACATCCTTCAAGCTTAGAGAGTACATaGTACCAACAGTCCTTATGT +
Preference number: 4 (lower is better)
Translates to: NLIIAEAGIEQADSRHPSSLEST*YQQSLC
Trigger: ACATAAGGACTGTTGGTAGCATGTACTCTCTAAGCT...TGAAGGATGTCTGGAGTCAGCCTGTTCAATACCAGCTTCAGCAATAATTAGATT
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445129.1
CDS-3UTR CCA 90 bp GAGAAAGAGTACCATATGGAAGTTAACACACACACACCCCTTGCAAGTCAAAATATTCTCTTTTTCTGCTaGCCATTGATACACGTAGAC +
Preference number: 4 (lower is better)
Translates to: EKEYHMEVNTHTPLASQNILFFC*PLIHVD
Trigger: GTCTACGTGTATCAATGGCCAGCAGAAAAAGAGAAT...ATTTTGACTTGCAAGGGGTGTGTGTGTGTTAACTTCCATATGGTACTCTTTCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR CCA 90 bp CATAGAGTAGGATGTTCGTTCTATGACAACATCAAGTATACTTGTGGGAATGGTGGTTATTTCCATAGCTaGAGATTCCAGAGCCTTTCA +
Preference number: 4 (lower is better)
Translates to: HRVGCSFYDNIKYTCGNGGYFHS*RFQSLS
Trigger: TGAAAGGCTCTGGAATCTCCAGCTATGGAAATAACC...ACCATTCCCACAAGTATACTTGATGTTGTCATAGAACGAACATCCTACTCTATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR CCA 90 bp AAGACCTATGACTACTATGCAGAGAGGTCTATGATCTGGGAAAGTAATTGGTTACAGGGATTGGTGAGATaGTTTTTGGTAGGAGAATTC +
Preference number: 4 (lower is better)
Translates to: KTYDYYAERSMIWESNWLQGLVR*FLVGEF
Trigger: GAATTCTCCTACCAAAAACCATCTCACCAATCCCTG...TAACCAATTACTTTCCCAGATCATAGACCTCTCTGCATAGTAGTCATAGGTCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR CCA 90 bp AAGACCTATGACTACTATGCAGAGAGGTCTATGATCTGGGAAAGTAATTGGTTATGCAAAAGCCACAAATaGCCCTTTAATCTTTGGCTG +
Preference number: 4 (lower is better)
Translates to: KTYDYYAERSMIWESNWLCKSHK*PFNLWL
Trigger: CAGCCAAAGATTAAAGGGCCATTTGTGGCTTTTGCA...TAACCAATTACTTTCCCAGATCATAGACCTCTCTGCATAGTAGTCATAGGTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR CCA 90 bp CAGATACTATATTCTACTGATCTGAGGGGGTTCACTGCTTACGAGATTGCTACAAAAGATTTAAAGCACTaGCTGTGTAGTAGAATCCTG +
Preference number: 4 (lower is better)
Translates to: QILYSTDLRGFTAYEIATKDLKH*LCSRIL
Trigger: CAGGATTCTACTACACAGCCAGTGCTTTAAATCTTT...TGTAGCAATCTCGTAAGCAGTGAACCCCCTCAGATCAGTAGAATATAGTATCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR CCA 90 bp CATAGAGTAGGATGTTCGTTCTATGACAACATCAAGTATACTTGTGGGAATGGTTTTTCAAAGTGTATTTaGGGCCAAGTCTCCTCTGTG +
Preference number: 4 (lower is better)
Translates to: HRVGCSFYDNIKYTCGNGFSKCI*GQVSSV
Trigger: CACAGAGGAGACTTGGCCCCAAATACACTTTGAAAA...ACCATTCCCACAAGTATACTTGATGTTGTCATAGAACGAACATCCTACTCTATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR CCA 90 bp CAGCCCTTTGCTAAGCAAAAGCCTAGCAAAGGCAGTAAAATCTGGAATGCAATAAGTGGGAATTCCACTTaGAGAATGGTCTATAGTTTT +
Preference number: 4 (lower is better)
Translates to: QPFAKQKPSKGSKIWNAISGNST*RMVYSF
Trigger: AAAACTATAGACCATTCTCCAAGTGGAATTCCCACT...TATTGCATTCCAGATTTTACTGCCTTTGCTAGGCTTTTGCTTAGCAAAGGGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR CCA 90 bp CAGATACTATATTCTACTGATCTGAGGGGGTTCACTGCTTACGAGATTGCTACAAGAAAGAGTACCATATaGAAGTTAACACACACACAC +
Preference number: 4 (lower is better)
Translates to: QILYSTDLRGFTAYEIATRKSTI*KLTHTH
Trigger: GTGTGTGTGTGTTAACTTCCATATGGTACTCTTTCT...TGTAGCAATCTCGTAAGCAGTGAACCCCCTCAGATCAGTAGAATATAGTATCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR CCA 90 bp GTAGGATGTTCGTTCTATGACAACATCAAGTATACTTGTGGGAATGGTGACAAAATTCTCTTTTTCTGCTaGCCATTGATACACGTAGAC +
Preference number: 4 (lower is better)
Translates to: VGCSFYDNIKYTCGNGDKILFFC*PLIHVD
Trigger: GTCTACGTGTATCAATGGCCAGCAGAAAAAGAGAAT...TTTGTCACCATTCCCACAAGTATACTTGATGTTGTCATAGAACGAACATCCTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR CCA 90 bp CATAGAGTAGGATGTTCGTTCTATGACAACATCAAGTATACTTGTGGGAATGGTTGGCCCTTTAATCTTTaGCTGATAAACCCCATCAAA +
Preference number: 4 (lower is better)
Translates to: HRVGCSFYDNIKYTCGNGWPFNL*LINPIK
Trigger: TTTGATGGGGTTTATCAGCCAAAGATTAAAGGGCCA...ACCATTCCCACAAGTATACTTGATGTTGTCATAGAACGAACATCCTACTCTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR CCA 90 bp AGAGGCCTAATGCAGGATATTGATTGGTTTAATCTAATTATTGCTGAAGCTGGTTTTTCAAAGTGTATTTaGGGCCAAGTCTCCTCTGTG +
Preference number: 4 (lower is better)
Translates to: RGLMQDIDWFNLIIAEAGFSKCI*GQVSSV
Trigger: CACAGAGGAGACTTGGCCCCAAATACACTTTGAAAA...ACCAGCTTCAGCAATAATTAGATTAAACCAATCAATATCCTGCATTAGGCCTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445129.1
CDS-3UTR CCA 90 bp CAGATACTATATTCTACTGATCTGAGGGGGTTCACTGCTTACGAGATTGCTACAATCAATGTGTTTTTATaGGAGGGCATAGCAATACAA +
Preference number: 4 (lower is better)
Translates to: QILYSTDLRGFTAYEIATINVFL*EGIAIQ
Trigger: TTGTATTGCTATGCCCTCCCATAAAAACACATTGAT...TGTAGCAATCTCGTAAGCAGTGAACCCCCTCAGATCAGTAGAATATAGTATCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR CCA 90 bp GAGAAAGAGTACCATATGGAAGTTAACACACACACACCCCTTGCAAGTCAAAATAGAAAGAGTACCATATaGAAGTTAACACACACACAC +
Preference number: 4 (lower is better)
Translates to: EKEYHMEVNTHTPLASQNRKSTI*KLTHTH
Trigger: GTGTGTGTGTGTTAACTTCCATATGGTACTCTTTCT...ATTTTGACTTGCAAGGGGTGTGTGTGTGTTAACTTCCATATGGTACTCTTTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR TCA 90 bp AATCATAGAGTAGGATGTTCGTTCTATGACAACATCAAGTATACTTGTGGGAATCTACATTTGAAGGTTTaGCTGACCACTCCGGTATTA +
Preference number: 4 (lower is better)
Translates to: NHRVGCSFYDNIKYTCGNLHLKV*LTTPVL
Trigger: TAATACCGGAGTGGTCAGTCAAACCTTCAAATGTAG...ATTCCCACAAGTATACTTGATGTTGTCATAGAACGAACATCCTACTCTATGATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR TCA 90 bp AGAGGCCTAATGCAGGATATTGATTGGTTTAATCTAATTATTGCTGAAGCTGGTAAAGAACAGGTTTCTTaGTCATGGCAAGCTTTGAAG +
Preference number: 4 (lower is better)
Translates to: RGLMQDIDWFNLIIAEAGKEQVS*SWQALK
Trigger: CTTCAAAGCTTGCCATGATCAAGAAACCTGTTCTTT...ACCAGCTTCAGCAATAATTAGATTAAACCAATCAATATCCTGCATTAGGCCTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445129.1
CDS-3UTR TCA 90 bp AATCATAGAGTAGGATGTTCGTTCTATGACAACATCAAGTATACTTGTGGGAATCTTTCTTCTGGTTGCTaGACACAGGTATGCAAGAAA +
Preference number: 4 (lower is better)
Translates to: NHRVGCSFYDNIKYTCGNLSSGC*TQVCKK
Trigger: TTTCTTGCATACCTGTGTTCAGCAACCAGAAGAAAG...ATTCCCACAAGTATACTTGATGTTGTCATAGAACGAACATCCTACTCTATGATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR TCA 90 bp AAGACCTATGACTACTATGCAGAGAGGTCTATGATCTGGGAAAGTAATTGGTTAATAGCAATACAATGGTaGGATGAGGATGATGACAAA +
Preference number: 4 (lower is better)
Translates to: KTYDYYAERSMIWESNWLIAIQW*DEDDDK
Trigger: TTTGTCATCATCCTCATCTCACCATTGTATTGCTAT...TAACCAATTACTTTCCCAGATCATAGACCTCTCTGCATAGTAGTCATAGGTCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR GCA 90 bp AAAAGCTACCTGAAAGATTTAAAGCACTGGCTGTGTAGTAGAATCCTGCAAAAGCACTGCTTACGAGATTaGTACAAGAAAGTCTTAGTT +
Preference number: 4 (lower is better)
Translates to: KSYLKDLKHWLCSRILQKHCLRD*YKKVLV
Trigger: AACTAAGACTTTCTTGTAGCAATCTCGTAAGCAGTG...CTTTTGCAGGATTCTACTACACAGCCAGTGCTTTAAATCTTTCAGGTAGCTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647765.1
CDS-3UTR CCA 90 bp AGAGGCCTAATGCAGGATATTGATTGGTTTAATCTAATTATTGCTGAAGCTGGTATTCTCTTTTTCTGCTaGCCATTGATACACGTAGAC +
Preference number: 4 (lower is better)
Translates to: RGLMQDIDWFNLIIAEAGILFFC*PLIHVD
Trigger: GTCTACGTGTATCAATGGCCAGCAGAAAAAGAGAAT...ACCAGCTTCAGCAATAATTAGATTAAACCAATCAATATCCTGCATTAGGCCTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445129.1
CDS-3UTR CCA 90 bp AGAGGCCTAATGCAGGATATTGATTGGTTTAATCTAATTATTGCTGAAGCTGGTTGGCCCTTTAATCTTTaGCTGATAAACCCCATCAAA +
Preference number: 4 (lower is better)
Translates to: RGLMQDIDWFNLIIAEAGWPFNL*LINPIK
Trigger: TTTGATGGGGTTTATCAGCCAAAGATTAAAGGGCCA...ACCAGCTTCAGCAATAATTAGATTAAACCAATCAATATCCTGCATTAGGCCTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445129.1
CDS-3UTR CCA 90 bp AGAGGCCTAATGCAGGATATTGATTGGTTTAATCTAATTATTGCTGAAGCTGGTAAAGATTTAAAGCACTaGCTGTGTAGTAGAATCCTG +
Preference number: 4 (lower is better)
Translates to: RGLMQDIDWFNLIIAEAGKDLKH*LCSRIL
Trigger: CAGGATTCTACTACACAGCCAGTGCTTTAAATCTTT...ACCAGCTTCAGCAATAATTAGATTAAACCAATCAATATCCTGCATTAGGCCTCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445129.1
CDS-3UTR CAA 90 bp AAAGACAGGTGGTTCTATGGGCAGACGGATCAGAGGGCTTTCAGCTGGGATCTGCGTAGACTGTGGTTCTaGAAGACCCGGCATCCAGCA +
Preference number: 5 (lower is better)
Translates to: KDRWFYGQTDQRAFSWDLRRLWF*KTRHPA
Trigger: TGCTGGATGCCGGGTCTTCAAGAACCACAGTCTACG...CAGATCCCAGCTGAAAGCCCTCTGATCCGTCTGCCCATAGAACCACCTGTCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647765.1
CDS-3UTR CAA 90 bp GGGGAACTTAATATAAAGAGCCTGACCTTCGTGGCCTGTCTCTTCTCTGTTCCCGGGAGGACCTCTTGCTaGTGGATCTGGATGACAGTG +
Preference number: 5 (lower is better)
Translates to: GELNIKSLTFVACLFSVPGRTSC*WIWMTV
Trigger: CACTGTCATCCAGATCCACAAGCAAGAGGTCCTCCC...GGGAACAGAGAAGAGACAGGCCACGAAGGTCAGGCTCTTTATATTAAGTTCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR CAA 90 bp TGCGGGTGCACCCACATGTGCCACAGGTTCTTCTCCAGGAAATTTCCCATTAAAGGGAGGACCTCTTGCTaGTGGATCTGGATGACAGTG +
Preference number: 5 (lower is better)
Translates to: CGCTHMCHRFFSRKFPIKGRTSC*WIWMTV
Trigger: CACTGTCATCCAGATCCACAAGCAAGAGGTCCTCCC...TTTAATGGGAAATTTCCTGGAGAAGAACCTGTGGCACATGTGGGTGCACCCGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647765.1
CDS CCA 90 bp AAGTACCACAATACTCACAAGCAAGACCACCAAGGCAATGATGGTTaGAGTTCGGTAGAGGGCCTTGAGGCCTGCTTGCTCACATGGTTG +
Preference number: 5 (lower is better)
Translates to: KYHNTHKQDHQGNDG*SSVEGLEACLLTWL
Trigger: CAACCATGTGAGCAAGCAGGCCTCAAGGCCCTCTACCGAACTCCAACCATCATTGCCTTGGTGGTCTTGCTTGTGAGTATTGTGGTACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301825.8
ENST00000439533.5
ENST00000445129.1
ENST00000456402.5
ENST00000647765.1
CDS-3UTR CAA 90 bp GCTGAAGCTGGTATTGAACAGGCTGACTCCAGACATCCTTCAGGCTTCATATCATGGAGGGAGGACCTCTaGCTTGTGGATCTGGATGAC +
Preference number: 5 (lower is better)
Translates to: AEAGIEQADSRHPSGFISWREDL*LVDLDD
Trigger: GTCATCCAGATCCACAAGCAAGAGGTCCTCCCTCCA...TGATATGAAGCCTGAAGGATGTCTGGAGTCAGCCTGTTCAATACCAGCTTCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445129.1
CDS-3UTR CAA 90 bp GAAGGCTCAGTCAGAATCCACTGCATGGTCAAAGGCATGCTCGGAGTGCCTCTTGCCTCTTTCTTCTGGTaGCTGAACACAGGTATGCAA +
Preference number: 5 (lower is better)
Translates to: EGSVRIHCMVKGMLGVPLASFFW*LNTGMQ
Trigger: TTGCATACCTGTGTTCAGCAACCAGAAGAAAGAGGC...AAGAGGCACTCCGAGCATGCCTTTGACCATGCAGTGGATTCTGACTGAGCCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647765.1
CDS-3UTR CAA 90 bp TGCGGGTGCACCCACATGTGCCACAGGTTCTTCTCCAGGAAATTTCCCATTAAAGACTCTAAGCAGCCATaGGACTCCAGGAGCTGCTTT +
Preference number: 5 (lower is better)
Translates to: CGCTHMCHRFFSRKFPIKDSKQP*DSRSCF
Trigger: AAAGCAGCTCCTGGAGTCCAATGGCTGCTTAGAGTC...TTTAATGGGAAATTTCCTGGAGAAGAACCTGTGGCACATGTGGGTGCACCCGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647765.1
CDS-3UTR CAA 90 bp GCATGGTCAAAGGCATGCTCGGAGTGCCTCTTTCTTCTGGTTGCTGAACACAGGTGGAAAGTCAGCCCTTaGCTAAGCAAAAGCCTAGCA +
Preference number: 5 (lower is better)
Translates to: AWSKACSECLFLLVAEHRWKVSP*LSKSLA
Trigger: TGCTAGGCTTTTGCTTAGCAAAGGGCTGACTTTCCA...CCTGTGTTCAGCAACCAGAAGAAAGAGGCACTCCGAGCATGCCTTTGACCATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647765.1
CDS-3UTR CAA 90 bp GAGAAAGAGTACCATATGGAAGTTAACACACACACACCCCTTGCAAGTCAAAATGGCCTTGAGGCCTGCTaGCTCACATGGTTGGCGGGT +
Preference number: 5 (lower is better)
Translates to: EKEYHMEVNTHTPLASQNGLEAC*LTWLAG
Trigger: ACCCGCCAACCATGTGAGCAAGCAGGCCTCAAGGCC...ATTTTGACTTGCAAGGGGTGTGTGTGTGTTAACTTCCATATGGTACTCTTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR CAA 90 bp CTTCTCTGTTCCCCAATAGATCAGCATGTGGGTAGTGAGGTCTCTGAAGAACAACGTAGACTGTGGTTCTaGAAGACCCGGCATCCAGCA +
Preference number: 5 (lower is better)
Translates to: LLCSPIDQHVGSEVSEEQRRLWF*KTRHPA
Trigger: TGCTGGATGCCGGGTCTTCAAGAACCACAGTCTACG...TTGTTCTTCAGAGACCTCACTACCCACATGCTGATCTATTGGGGAACAGAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR CAA 90 bp ATTATTGCTGAAGCTGGTATTGAACAGGCTGACTCCAGACATCCTTCAGGCTTCCGTAGACTGTGGTTCTaGAAGACCCGGCATCCAGCA +
Preference number: 5 (lower is better)
Translates to: IIAEAGIEQADSRHPSGFRRLWF*KTRHPA
Trigger: TGCTGGATGCCGGGTCTTCAAGAACCACAGTCTACG...GAAGCCTGAAGGATGTCTGGAGTCAGCCTGTTCAATACCAGCTTCAGCAATAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445129.1
CDS-3UTR CAA 90 bp GTCTCTGAAGAACAATATGCACAGAATAGCCAAGGGATGCCTCAAGAGGTGCTGGGCTCTGGGGACATCTaGGGGGTTATTTCCATAGCT +
Preference number: 5 (lower is better)
Translates to: VSEEQYAQNSQGMPQEVLGSGDI*GVISIA
Trigger: AGCTATGGAAATAACCCCCAAGATGTCCCCAGAGCC...CAGCACCTCTTGAGGCATCCCTTGGCTATTCTGTGCATATTGTTCTTCAGAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR CAA 90 bp GAAGGCTCAGTCAGAATCCACTGCATGGTCAAAGGCATGCTCGGAGTGCCTCTTAATTCTGCAGGAGCATaGCCAGAAACTTCTTCTCAG +
Preference number: 5 (lower is better)
Translates to: EGSVRIHCMVKGMLGVPLNSAGA*PETSSQ
Trigger: CTGAGAAGAAGTTTCTGGCAATGCTCCTGCAGAATT...AAGAGGCACTCCGAGCATGCCTTTGACCATGCAGTGGATTCTGACTGAGCCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647765.1
CDS-3UTR CAA 90 bp GTGAGGTCTCTGAAGAACAATATGCACAGAATAGCCAAGGGATGCCTCAAGAGGGACTCTAAGCAGCCATaGGACTCCAGGAGCTGCTTT +
Preference number: 5 (lower is better)
Translates to: VRSLKNNMHRIAKGCLKRDSKQP*DSRSCF
Trigger: AAAGCAGCTCCTGGAGTCCAATGGCTGCTTAGAGTC...CCTCTTGAGGCATCCCTTGGCTATTCTGTGCATATTGTTCTTCAGAGACCTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR CAA 90 bp TTGCTGAAGCTGGTATTGAACAGGCTGACTCCAGACATCCTTCAGGCTTCATATGGCTCTGGGGACATCTaGGGGGTTATTTCCATAGCT +
Preference number: 5 (lower is better)
Translates to: LLKLVLNRLTPDILQASYGSGDI*GVISIA
Trigger: AGCTATGGAAATAACCCCCAAGATGTCCCCAGAGCC...ATATGAAGCCTGAAGGATGTCTGGAGTCAGCCTGTTCAATACCAGCTTCAGCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000445129.1
CDS-3UTR CAA 90 bp ACAAGTGGTAGATGTAGTTGGCTGAGAAGCAGTAAGAGCGGGCATATACCTCATGGCTCTGGGGACATCTaGGGGGTTATTTCCATAGCT +
Preference number: 5 (lower is better)
Translates to: TSGRCSWLRSSKSGHIPHGSGDI*GVISIA
Trigger: AGCTATGGAAATAACCCCCAAGATGTCCCCAGAGCC...ATGAGGTATATGCCCGCTCTTACTGCTTCTCAGCCAACTACATCTACCACTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647765.1
CDS-3UTR CAA 90 bp GCTGAAGCTGGTATTGAACAGGCTGACTCCAGACATCCTTCAGGCTTCATATCACTGCCCCTTGACTTTTaGCATACACTCCTCAAAGGC +
Preference number: 5 (lower is better)
Translates to: AEAGIEQADSRHPSGFISLPLDF*HTLLKG
Trigger: GCCTTTGAGGAGTGTATGCAAAAAGTCAAGGGGCAG...TGATATGAAGCCTGAAGGATGTCTGGAGTCAGCCTGTTCAATACCAGCTTCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445129.1
CDS-3UTR CAA 90 bp GCTGAAGCTGGTATTGAACAGGCTGACTCCAGACATCCTTCAGGCTTCATATCAGATGGAACCTGCCCCTaGACTTTTTGCATACACTCC +
Preference number: 5 (lower is better)
Translates to: AEAGIEQADSRHPSGFISDGTCP*TFCIHS
Trigger: GGAGTGTATGCAAAAAGTCAAGGGGCAGGTTCCATC...TGATATGAAGCCTGAAGGATGTCTGGAGTCAGCCTGTTCAATACCAGCTTCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000445129.1
CDS-3UTR CAA 90 bp AAAGACAGGTGGTTCTATGGGCAGACGGATCAGAGGGCTTTCAGCTGGGATCTGTTGCCCAGAAATGATTaGAGCACCCCTAAAGTCAAA +
Preference number: 5 (lower is better)
Translates to: KDRWFYGQTDQRAFSWDLLPRND*STPKVK
Trigger: TTTGACTTTAGGGGTGCTCAAATCATTTCTGGGCAA...CAGATCCCAGCTGAAAGCCCTCTGATCCGTCTGCCCATAGAACCACCTGTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647765.1
CDS-3UTR CAA 90 bp GTAGAGCGTGTATACGTAGCCATACAGGGACACCTGCATGATGTCGCTGGTGTTTGCTTAATGGGTATCTaGCCAGGAAGAATACTGAGG +
Preference number: 5 (lower is better)
Translates to: VERVYVAIQGHLHDVAGVCLMGI*PGRILR
Trigger: CCTCAGTATTCTTCCTGGCAAGATACCCATTAAGCA...AACACCAGCGACATCATGCAGGTGTCCCTGTATGGCTACGTATACACGCTCTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647765.1
CDS GCA 90 bp GCATCCAGCACAATACCATACTTCAGTCCTGGAGGGAGGACCTCTTaGTTGTGGATCTGGATGACAGTGATACTCACAAGTACCACAATA +
Preference number: 5 (lower is better)
Translates to: ASSTIPYFSPGGRTS*LWIWMTVILTSTTI
Trigger: TATTGTGGTACTTGTGAGTATCACTGTCATCCAGATCCACAAGCAAGAGGTCCTCCCTCCAGGACTGAAGTATGGTATTGTGCTGGATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301825.8
ENST00000445129.1
ENST00000456402.5
CDS CCA 90 bp AACCCTATCTTCAGTCCTGGAGGGAGGACCTCTTGCTTGTGGATCTaGATGACAGTGATACTCACAAGTACCACAATACTCACAAGCAAG +
Preference number: 5 (lower is better)
Translates to: NPIFSPGGRTSCLWI*MTVILTSTTILTSK
Trigger: CTTGCTTGTGAGTATTGTGGTACTTGTGAGTATCACTGTCATCCAGATCCACAAGCAAGAGGTCCTCCCTCCAGGACTGAAGATAGGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439533.5
CDS-3UTR CAA 90 bp AGAGGCCTAATGCAGGATATTGATTGGTTTAATCTAATTATTGCTGAAGCTGGTGGCCTTGAGGCCTGCTaGCTCACATGGTTGGCGGGT +
Preference number: 5 (lower is better)
Translates to: RGLMQDIDWFNLIIAEAGGLEAC*LTWLAG
Trigger: ACCCGCCAACCATGTGAGCAAGCAGGCCTCAAGGCC...ACCAGCTTCAGCAATAATTAGATTAAACCAATCAATATCCTGCATTAGGCCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445129.1
CDS-3UTR CAA 90 bp CAGATACTATATTCTACTGATCTGAGGGGGTTCACTGCTTACGAGATTGCTACATGGAGGGAGGACCTCTaGCTTGTGGATCTGGATGAC +
Preference number: 5 (lower is better)
Translates to: QILYSTDLRGFTAYEIATWREDL*LVDLDD
Trigger: GTCATCCAGATCCACAAGCAAGAGGTCCTCCCTCCA...TGTAGCAATCTCGTAAGCAGTGAACCCCCTCAGATCAGTAGAATATAGTATCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR CAA 90 bp GAGGATGATGACAAACACACAGGTTGCAATCTAGTGACCAGAGCCCTAAGTGGGGGACTTGAAGTAGCTTaGGATGCTTTCAAGGACTTC +
Preference number: 5 (lower is better)
Translates to: EDDDKHTGCNLVTRALSGGLEVA*DAFKDF
Trigger: GAAGTCCTTGAAAGCATCCAAAGCTACTTCAAGTCC...CCCACTTAGGGCTCTGGTCACTAGATTGCAACCTGTGTGTTTGTCATCATCCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR CAA 90 bp CTCCCCCAGATACTATATTCTACTGATCTGAGGGGGTTCACTGCTTACGAGATTTATACCTCATCAAATTaGGGGAGCAGCAGTGGGAGC +
Preference number: 5 (lower is better)
Translates to: LPQILYSTDLRGFTAYEIYTSSN*GSSSGS
Trigger: GCTCCCACTGCTGCTCCCCAAATTTGATGAGGTATA...AATCTCGTAAGCAGTGAACCCCCTCAGATCAGTAGAATATAGTATCTGGGGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR CAA 90 bp ATTATTGCTGAAGCTGGTATTGAACAGGCTGACTCCAGACATCCTTCAGGCTTCTATACCTCATCAAATTaGGGGAGCAGCAGTGGGAGC +
Preference number: 5 (lower is better)
Translates to: IIAEAGIEQADSRHPSGFYTSSN*GSSSGS
Trigger: GCTCCCACTGCTGCTCCCCAAATTTGATGAGGTATA...GAAGCCTGAAGGATGTCTGGAGTCAGCCTGTTCAATACCAGCTTCAGCAATAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445129.1
CDS-3UTR CAA 90 bp TGGGTAGTGAGGTCTCTGAAGAACAATATGCACAGAATAGCCAAGGGATGCCTCGCCTCTTTCTTCTGGTaGCTGAACACAGGTATGCAA +
Preference number: 5 (lower is better)
Translates to: WVVRSLKNNMHRIAKGCLASFFW*LNTGMQ
Trigger: TTGCATACCTGTGTTCAGCAACCAGAAGAAAGAGGC...GAGGCATCCCTTGGCTATTCTGTGCATATTGTTCTTCAGAGACCTCACTACCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR CAA 90 bp GTCTCTGAAGAACAATATGCACAGAATAGCCAAGGGATGCCTCAAGAGGTGCTGTGGAAAGTCAGCCCTTaGCTAAGCAAAAGCCTAGCA +
Preference number: 5 (lower is better)
Translates to: VSEEQYAQNSQGMPQEVLWKVSP*LSKSLA
Trigger: TGCTAGGCTTTTGCTTAGCAAAGGGCTGACTTTCCA...CAGCACCTCTTGAGGCATCCCTTGGCTATTCTGTGCATATTGTTCTTCAGAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS TCA 90 bp TACCATACTTTCCATCCTGTGCAAAGCAGGAAGTGTTCTCTTATCTaGGGCCAATCCCTTCCCTCCATTTGGGATCTCCATTCAGAACTC +
Preference number: 5 (lower is better)
Translates to: YHTFHPVQSRKCSLI*GQSLPSIWDLHSEL
Trigger: GAGTTCTGAATGGAGATCCCAAATGGAGGGAAGGGATTGGCCTCAGATAAGAGAACACTTCCTGCTTTGCACAGGATGGAAAGTATGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647765.1
CDS CCA 90 bp ATACCATACTTCAGTCCTGGAGGGAGGACCTCTTGCTTGTGGATCTaGATGACAGTGATACTCACAAGTACCACAATACTCACAAGCAAG +
Preference number: 5 (lower is better)
Translates to: IPYFSPGGRTSCLWI*MTVILTSTTILTSK
Trigger: CTTGCTTGTGAGTATTGTGGTACTTGTGAGTATCACTGTCATCCAGATCCACAAGCAAGAGGTCCTCCCTCCAGGACTGAAGTATGGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301825.8
ENST00000445129.1
ENST00000456402.5
CDS CCA 90 bp AGCACAATACCATACTTCAGTCCTGGAGGGAGGACCTCTTGCTTGTaGATCTGGATGACAGTGATACTCACAAGTACCACAATACTCACA +
Preference number: 5 (lower is better)
Translates to: STIPYFSPGGRTSCL*IWMTVILTSTTILT
Trigger: TGTGAGTATTGTGGTACTTGTGAGTATCACTGTCATCCAGATCCACAAGCAAGAGGTCCTCCCTCCAGGACTGAAGTATGGTATTGTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301825.8
ENST00000445129.1
ENST00000456402.5
CDS-3UTR CAA 90 bp AATCTAATTATTGCTGAAGCTGGTATTGAACAGGCTGACTCCAGACATCCTTCATGCTTGCTCACATGGTaGGCGGGTCAGCACAGTGAA +
Preference number: 5 (lower is better)
Translates to: NLIIAEAGIEQADSRHPSCLLTW*AGQHSE
Trigger: TTCACTGTGCTGACCCGCCAACCATGTGAGCAAGCA...TGAAGGATGTCTGGAGTCAGCCTGTTCAATACCAGCTTCAGCAATAATTAGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445129.1
CDS-3UTR CAA 90 bp AATCTAATTATTGCTGAAGCTGGTATTGAACAGGCTGACTCCAGACATCCTTCAGGGAGGACCTCTTGCTaGTGGATCTGGATGACAGTG +
Preference number: 5 (lower is better)
Translates to: NLIIAEAGIEQADSRHPSGRTSC*WIWMTV
Trigger: CACTGTCATCCAGATCCACAAGCAAGAGGTCCTCCC...TGAAGGATGTCTGGAGTCAGCCTGTTCAATACCAGCTTCAGCAATAATTAGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445129.1
CDS-3UTR CAA 90 bp GCTGAAGCTGGTATTGAACAGGCTGACTCCAGACATCCTTCAGGCTTCATATCATTTTTCTGCTGGCCATaGATACACGTAGACTGTGGT +
Preference number: 5 (lower is better)
Translates to: AEAGIEQADSRHPSGFISFFCWP*IHVDCG
Trigger: ACCACAGTCTACGTGTATCAATGGCCAGCAGAAAAA...TGATATGAAGCCTGAAGGATGTCTGGAGTCAGCCTGTTCAATACCAGCTTCAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445129.1
CDS-3UTR CAA 90 bp ATTATTGCTGAAGCTGGTATTGAACAGGCTGACTCCAGACATCCTTCAGGCTTCAGCTGCTGTTTCATTTaGCAACCTCAGCAAGCGCAT +
Preference number: 5 (lower is better)
Translates to: IIAEAGIEQADSRHPSGFSCCFI*QPQQAH
Trigger: ATGCGCTTGCTGAGGTTGCAAAATGAAACAGCAGCT...GAAGCCTGAAGGATGTCTGGAGTCAGCCTGTTCAATACCAGCTTCAGCAATAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445129.1
CDS-3UTR CAA 90 bp TGTGGCTGCTGCCCTGAAGGAAGTAAGTCTTCTCCCCCAGATACTATATTCTACGGACTTGAAGTAGCTTaGGATGCTTTCAAGGACTTC +
Preference number: 5 (lower is better)
Translates to: CGCCPEGSKSSPPDTIFYGLEVA*DAFKDF
Trigger: GAAGTCCTTGAAAGCATCCAAAGCTACTTCAAGTCC...GTAGAATATAGTATCTGGGGGAGAAGACTTACTTCCTTCAGGGCAGCAGCCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR CAA 90 bp GGGGAACTTAATATAAAGAGCCTGACCTTCGTGGCCTGTCTCTTCTCTGTTCCCATATACCCCTTCTTCTaGCCCAGAAATGATTTGAGC +
Preference number: 5 (lower is better)
Translates to: GELNIKSLTFVACLFSVPIYPFF*PRNDLS
Trigger: GCTCAAATCATTTCTGGGCAAGAAGAAGGGGTATAT...GGGAACAGAGAAGAGACAGGCCACGAAGGTCAGGCTCTTTATATTAAGTTCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR CAA 90 bp GAGGATGATGACAAACACACAGGTTGCAATCTAGTGACCAGAGCCCTAAGTGGGTTTTTCAAAGTGTATTaGGGGCCAAGTCTCCTCTGT +
Preference number: 5 (lower is better)
Translates to: EDDDKHTGCNLVTRALSGFFKVY*GPSLLC
Trigger: ACAGAGGAGACTTGGCCCCAAATACACTTTGAAAAA...CCCACTTAGGGCTCTGGTCACTAGATTGCAACCTGTGTGTTTGTCATCATCCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR CAA 90 bp TGGGTAGTGAGGTCTCTGAAGAACAATATGCACAGAATAGCCAAGGGATGCCTCTGCTTAATGGGTATCTaGCCAGGAAGAATACTGAGG +
Preference number: 5 (lower is better)
Translates to: WVVRSLKNNMHRIAKGCLCLMGI*PGRILR
Trigger: CCTCAGTATTCTTCCTGGCAAGATACCCATTAAGCA...GAGGCATCCCTTGGCTATTCTGTGCATATTGTTCTTCAGAGACCTCACTACCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR CAA 90 bp CATAGAGTAGGATGTTCGTTCTATGACAACATCAAGTATACTTGTGGGAATGGTTGCTTGCTCACATGGTaGGCGGGTCAGCACAGTGAA +
Preference number: 5 (lower is better)
Translates to: HRVGCSFYDNIKYTCGNGCLLTW*AGQHSE
Trigger: TTCACTGTGCTGACCCGCCAACCATGTGAGCAAGCA...ACCATTCCCACAAGTATACTTGATGTTGTCATAGAACGAACATCCTACTCTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR CAA 90 bp AAAAGCTACCTGAAAGATTTAAAGCACTGGCTGTGTAGTAGAATCCTGCAAAAGTGGAGGGAGGACCTCTaGCTTGTGGATCTGGATGAC +
Preference number: 5 (lower is better)
Translates to: KSYLKDLKHWLCSRILQKWREDL*LVDLDD
Trigger: GTCATCCAGATCCACAAGCAAGAGGTCCTCCCTCCA...CTTTTGCAGGATTCTACTACACAGCCAGTGCTTTAAATCTTTCAGGTAGCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647765.1
CDS-3UTR CAA 90 bp GTCTCTGAAGAACAATATGCACAGAATAGCCAAGGGATGCCTCAAGAGGTGCTGACTACATTTGAAGGTTaGACTGACCACTCCGGTATT +
Preference number: 5 (lower is better)
Translates to: VSEEQYAQNSQGMPQEVLTTFEG*TDHSGI
Trigger: AATACCGGAGTGGTCAGTCAAACCTTCAAATGTAGT...CAGCACCTCTTGAGGCATCCCTTGGCTATTCTGTGCATATTGTTCTTCAGAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR CAA 90 bp TGGGTAGTGAGGTCTCTGAAGAACAATATGCACAGAATAGCCAAGGGATGCCTCACTACATTTGAAGGTTaGACTGACCACTCCGGTATT +
Preference number: 5 (lower is better)
Translates to: WVVRSLKNNMHRIAKGCLTTFEG*TDHSGI
Trigger: AATACCGGAGTGGTCAGTCAAACCTTCAAATGTAGT...GAGGCATCCCTTGGCTATTCTGTGCATATTGTTCTTCAGAGACCTCACTACCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR CAA 90 bp TTGCTGAAGCTGGTATTGAACAGGCTGACTCCAGACATCCTTCAGGCTTCATATAATTCTGCAGGAGCATaGCCAGAAACTTCTTCTCAG +
Preference number: 5 (lower is better)
Translates to: LLKLVLNRLTPDILQASYNSAGA*PETSSQ
Trigger: CTGAGAAGAAGTTTCTGGCAATGCTCCTGCAGAATT...ATATGAAGCCTGAAGGATGTCTGGAGTCAGCCTGTTCAATACCAGCTTCAGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445129.1
CDS-3UTR CAA 90 bp ACAAGTGGTAGATGTAGTTGGCTGAGAAGCAGTAAGAGCGGGCATATACCTCATTTTTTCAAAGTGTATTaGGGGCCAAGTCTCCTCTGT +
Preference number: 5 (lower is better)
Translates to: TSGRCSWLRSSKSGHIPHFFKVY*GPSLLC
Trigger: ACAGAGGAGACTTGGCCCCAAATACACTTTGAAAAA...ATGAGGTATATGCCCGCTCTTACTGCTTCTCAGCCAACTACATCTACCACTTGT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000647765.1
CDS-3UTR CAA 90 bp TGTGGCTGCTGCCCTGAAGGAAGTAAGTCTTCTCCCCCAGATACTATATTCTACTCACTGCTTACGAGATaGCTACAAGAAAGTCTTAGT +
Preference number: 5 (lower is better)
Translates to: CGCCPEGSKSSPPDTIFYSLLTR*LQESLS
Trigger: ACTAAGACTTTCTTGTAGCAATCTCGTAAGCAGTGA...GTAGAATATAGTATCTGGGGGAGAAGACTTACTTCCTTCAGGGCAGCAGCCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR CAA 90 bp AATCATAGAGTAGGATGTTCGTTCTATGACAACATCAAGTATACTTGTGGGAATTGCTTGCTCACATGGTaGGCGGGTCAGCACAGTGAA +
Preference number: 5 (lower is better)
Translates to: NHRVGCSFYDNIKYTCGNCLLTW*AGQHSE
Trigger: TTCACTGTGCTGACCCGCCAACCATGTGAGCAAGCA...ATTCCCACAAGTATACTTGATGTTGTCATAGAACGAACATCCTACTCTATGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR CAA 90 bp CAGCCCTTTGCTAAGCAAAAGCCTAGCAAAGGCAGTAAAATCTGGAATGCAATATTTTTCTGCTGGCCATaGATACACGTAGACTGTGGT +
Preference number: 5 (lower is better)
Translates to: QPFAKQKPSKGSKIWNAIFFCWP*IHVDCG
Trigger: ACCACAGTCTACGTGTATCAATGGCCAGCAGAAAAA...TATTGCATTCCAGATTTTACTGCCTTTGCTAGGCTTTTGCTTAGCAAAGGGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR CAA 90 bp AAGACCTATGACTACTATGCAGAGAGGTCTATGATCTGGGAAAGTAATTGGTTACTGCCCCTTGACTTTTaGCATACACTCCTCAAAGGC +
Preference number: 5 (lower is better)
Translates to: KTYDYYAERSMIWESNWLLPLDF*HTLLKG
Trigger: GCCTTTGAGGAGTGTATGCAAAAAGTCAAGGGGCAG...TAACCAATTACTTTCCCAGATCATAGACCTCTCTGCATAGTAGTCATAGGTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR CAA 90 bp AAGACCTATGACTACTATGCAGAGAGGTCTATGATCTGGGAAAGTAATTGGTTAGATGGAACCTGCCCCTaGACTTTTTGCATACACTCC +
Preference number: 5 (lower is better)
Translates to: KTYDYYAERSMIWESNWLDGTCP*TFCIHS
Trigger: GGAGTGTATGCAAAAAGTCAAGGGGCAGGTTCCATC...TAACCAATTACTTTCCCAGATCATAGACCTCTCTGCATAGTAGTCATAGGTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR CAA 90 bp CAGATACTATATTCTACTGATCTGAGGGGGTTCACTGCTTACGAGATTGCTACAAATTCTGCAGGAGCATaGCCAGAAACTTCTTCTCAG +
Preference number: 5 (lower is better)
Translates to: QILYSTDLRGFTAYEIATNSAGA*PETSSQ
Trigger: CTGAGAAGAAGTTTCTGGCAATGCTCCTGCAGAATT...TGTAGCAATCTCGTAAGCAGTGAACCCCCTCAGATCAGTAGAATATAGTATCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR CAA 90 bp CTCCCCCAGATACTATATTCTACTGATCTGAGGGGGTTCACTGCTTACGAGATTTCACTGCTTACGAGATaGCTACAAGAAAGTCTTAGT +
Preference number: 5 (lower is better)
Translates to: LPQILYSTDLRGFTAYEISLLTR*LQESLS
Trigger: ACTAAGACTTTCTTGTAGCAATCTCGTAAGCAGTGA...AATCTCGTAAGCAGTGAACCCCCTCAGATCAGTAGAATATAGTATCTGGGGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR CAA 90 bp TGTGGCTGCTGCCCTGAAGGAAGTAAGTCTTCTCCCCCAGATACTATATTCTACTGGAATGCAATAATCTaGCTAGGGATCAATGTGTTT +
Preference number: 5 (lower is better)
Translates to: CGCCPEGSKSSPPDTIFYWNAII*LGINVF
Trigger: AAACACATTGATCCCTAGCAAGATTATTGCATTCCA...GTAGAATATAGTATCTGGGGGAGAAGACTTACTTCCTTCAGGGCAGCAGCCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR CAA 90 bp AATCTAATTATTGCTGAAGCTGGTATTGAACAGGCTGACTCCAGACATCCTTCAGGACTTGAAGTAGCTTaGGATGCTTTCAAGGACTTC +
Preference number: 5 (lower is better)
Translates to: NLIIAEAGIEQADSRHPSGLEVA*DAFKDF
Trigger: GAAGTCCTTGAAAGCATCCAAAGCTACTTCAAGTCC...TGAAGGATGTCTGGAGTCAGCCTGTTCAATACCAGCTTCAGCAATAATTAGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445129.1
CDS-3UTR CAA 90 bp TTGCTGAAGCTGGTATTGAACAGGCTGACTCCAGACATCCTTCAGGCTTCATATAAAAGAACAGGTTTCTaGATCATGGCAAGCTTTGAA +
Preference number: 5 (lower is better)
Translates to: LLKLVLNRLTPDILQASYKRTGF*IMASFE
Trigger: TTCAAAGCTTGCCATGATCAAGAAACCTGTTCTTTT...ATATGAAGCCTGAAGGATGTCTGGAGTCAGCCTGTTCAATACCAGCTTCAGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445129.1
CDS-3UTR CAA 90 bp CTTCTCTGTTCCCCAATAGATCAGCATGTGGGTAGTGAGGTCTCTGAAGAACAATGGAATGCAATAATCTaGCTAGGGATCAATGTGTTT +
Preference number: 5 (lower is better)
Translates to: LLCSPIDQHVGSEVSEEQWNAII*LGINVF
Trigger: AAACACATTGATCCCTAGCAAGATTATTGCATTCCA...TTGTTCTTCAGAGACCTCACTACCCACATGCTGATCTATTGGGGAACAGAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS TCA 90 bp GCTATTCTTCTTTTTCAAAGTGTATTTGGGGCCAAGTCTCCTCTGTaGATTTGTAACCGTTCACAAACAAGTGGTAGATGTAGTTGGCTG +
Preference number: 5 (lower is better)
Translates to: AILLFQSVFGAKSPL*ICNRSQTSGRCSWL
Trigger: CAGCCAACTACATCTACCACTTGTTTGTGAACGGTTACAAATTCACAGAGGAGACTTGGCCCCAAATACACTTTGAAAAAGAAGAATAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000445129.1
CDS-3UTR CAA 90 bp AATCATAGAGTAGGATGTTCGTTCTATGACAACATCAAGTATACTTGTGGGAATCTGCCCCTTGACTTTTaGCATACACTCCTCAAAGGC +
Preference number: 5 (lower is better)
Translates to: NHRVGCSFYDNIKYTCGNLPLDF*HTLLKG
Trigger: GCCTTTGAGGAGTGTATGCAAAAAGTCAAGGGGCAG...ATTCCCACAAGTATACTTGATGTTGTCATAGAACGAACATCCTACTCTATGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR CAA 90 bp AACCCCATCAAAAGAACAGGTTTCTTGATCATGGCAAGCTTTGAAGTCAAATATAGCTGCTGTTTCATTTaGCAACCTCAGCAAGCGCAT +
Preference number: 5 (lower is better)
Translates to: NPIKRTGFLIMASFEVKYSCCFI*QPQQAH
Trigger: ATGCGCTTGCTGAGGTTGCAAAATGAAACAGCAGCT...ATATTTGACTTCAAAGCTTGCCATGATCAAGAAACCTGTTCTTTTGATGGGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647765.1
CDS-3UTR CAA 90 bp AATCTAATTATTGCTGAAGCTGGTATTGAACAGGCTGACTCCAGACATCCTTCAATATACCCCTTCTTCTaGCCCAGAAATGATTTGAGC +
Preference number: 5 (lower is better)
Translates to: NLIIAEAGIEQADSRHPSIYPFF*PRNDLS
Trigger: GCTCAAATCATTTCTGGGCAAGAAGAAGGGGTATAT...TGAAGGATGTCTGGAGTCAGCCTGTTCAATACCAGCTTCAGCAATAATTAGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445129.1
CDS-3UTR CAA 90 bp AACCCCATCAAAAGAACAGGTTTCTTGATCATGGCAAGCTTTGAAGTCAAATATTTTTTCTGCTGGCCATaGATACACGTAGACTGTGGT +
Preference number: 5 (lower is better)
Translates to: NPIKRTGFLIMASFEVKYFFCWP*IHVDCG
Trigger: ACCACAGTCTACGTGTATCAATGGCCAGCAGAAAAA...ATATTTGACTTCAAAGCTTGCCATGATCAAGAAACCTGTTCTTTTGATGGGGTT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000647765.1
CDS-3UTR CAA 90 bp AATCATAGAGTAGGATGTTCGTTCTATGACAACATCAAGTATACTTGTGGGAATAGCTGCTGTTTCATTTaGCAACCTCAGCAAGCGCAT +
Preference number: 5 (lower is better)
Translates to: NHRVGCSFYDNIKYTCGNSCCFI*QPQQAH
Trigger: ATGCGCTTGCTGAGGTTGCAAAATGAAACAGCAGCT...ATTCCCACAAGTATACTTGATGTTGTCATAGAACGAACATCCTACTCTATGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR CAA 90 bp GTAGGATGTTCGTTCTATGACAACATCAAGTATACTTGTGGGAATGGTGACAAAATATACCCCTTCTTCTaGCCCAGAAATGATTTGAGC +
Preference number: 5 (lower is better)
Translates to: VGCSFYDNIKYTCGNGDKIYPFF*PRNDLS
Trigger: GCTCAAATCATTTCTGGGCAAGAAGAAGGGGTATAT...TTTGTCACCATTCCCACAAGTATACTTGATGTTGTCATAGAACGAACATCCTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR CAA 90 bp AGAGGCCTAATGCAGGATATTGATTGGTTTAATCTAATTATTGCTGAAGCTGGTACTACATTTGAAGGTTaGACTGACCACTCCGGTATT +
Preference number: 5 (lower is better)
Translates to: RGLMQDIDWFNLIIAEAGTTFEG*TDHSGI
Trigger: AATACCGGAGTGGTCAGTCAAACCTTCAAATGTAGT...ACCAGCTTCAGCAATAATTAGATTAAACCAATCAATATCCTGCATTAGGCCTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445129.1
CDS-3UTR CAA 90 bp AGAGGCCTAATGCAGGATATTGATTGGTTTAATCTAATTATTGCTGAAGCTGGTTTGCCCAGAAATGATTaGAGCACCCCTAAAGTCAAA +
Preference number: 5 (lower is better)
Translates to: RGLMQDIDWFNLIIAEAGLPRND*STPKVK
Trigger: TTTGACTTTAGGGGTGCTCAAATCATTTCTGGGCAA...ACCAGCTTCAGCAATAATTAGATTAAACCAATCAATATCCTGCATTAGGCCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445129.1
CDS-3UTR CAA 90 bp AGAGGCCTAATGCAGGATATTGATTGGTTTAATCTAATTATTGCTGAAGCTGGTTTTTTCAAAGTGTATTaGGGGCCAAGTCTCCTCTGT +
Preference number: 5 (lower is better)
Translates to: RGLMQDIDWFNLIIAEAGFFKVY*GPSLLC
Trigger: ACAGAGGAGACTTGGCCCCAAATACACTTTGAAAAA...ACCAGCTTCAGCAATAATTAGATTAAACCAATCAATATCCTGCATTAGGCCTCT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000445129.1
CDS-3UTR CAA 90 bp AATCATAGAGTAGGATGTTCGTTCTATGACAACATCAAGTATACTTGTGGGAATTTGCCCAGAAATGATTaGAGCACCCCTAAAGTCAAA +
Preference number: 5 (lower is better)
Translates to: NHRVGCSFYDNIKYTCGNLPRND*STPKVK
Trigger: TTTGACTTTAGGGGTGCTCAAATCATTTCTGGGCAA...ATTCCCACAAGTATACTTGATGTTGTCATAGAACGAACATCCTACTCTATGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR CAA 90 bp AAGACCTATGACTACTATGCAGAGAGGTCTATGATCTGGGAAAGTAATTGGTTAAAAAGAACAGGTTTCTaGATCATGGCAAGCTTTGAA +
Preference number: 5 (lower is better)
Translates to: KTYDYYAERSMIWESNWLKRTGF*IMASFE
Trigger: TTCAAAGCTTGCCATGATCAAGAAACCTGTTCTTTT...TAACCAATTACTTTCCCAGATCATAGACCTCTCTGCATAGTAGTCATAGGTCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS-3UTR CAA 90 bp GTAGGATGTTCGTTCTATGACAACATCAAGTATACTTGTGGGAATGGTGACAAAAAAAGAACAGGTTTCTaGATCATGGCAAGCTTTGAA +
Preference number: 5 (lower is better)
Translates to: VGCSFYDNIKYTCGNGDKKRTGF*IMASFE
Trigger: TTCAAAGCTTGCCATGATCAAGAAACCTGTTCTTTT...TTTGTCACCATTCCCACAAGTATACTTGATGTTGTCATAGAACGAACATCCTAC
38% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS TCA 72 bp GGCCTGCTTGCTCACATGGTTGGCGGGTCAGCACAGTaGACATCTTTTCTCCTAGCTGTGCGGAGCCGATTC +
Preference number: 6 (lower is better)
Translates to: GLLAHMVGGSAQ*TSFLLAVRSRF
Trigger: GAATCGGCTCCGCACAGCTAGGAGAAAAGATGTTCACTGTGCTGACCCGCCAACCATGTGAGCAAGCAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301825.8
ENST00000647765.1
CDS TCA 72 bp GGCCTGCTTGCTCACATGGTTGGCGGGTCAGCACAGTaGACATCTTTTCTCCTAGCGTGTTTCAGTCTCTTC +
Preference number: 6 (lower is better)
Translates to: GLLAHMVGGSAQ*TSFLLACFSLF
Trigger: GAAGAGACTGAAACACGCTAGGAGAAAAGATGTTCACTGTGCTGACCCGCCAACCATGTGAGCAAGCAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000439533.5
ENST00000456402.5
CDS TCA 72 bp GGCCTGCTTGCTCACATGGTTGGCGGGTCAGCACAGTaGACATCTTTTCTCCTAGCTGCAGGTGAGAGAATA +
Preference number: 6 (lower is better)
Translates to: GLLAHMVGGSAQ*TSFLLAAGERI
Trigger: TATTCTCTCACCTGCAGCTAGGAGAAAAGATGTTCACTGTGCTGACCCGCCAACCATGTGAGCAAGCAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445129.1
CDS CCA 72 bp CTGGCCTTCAGTCCTGGAGGGAGGACCTCTTGCTTGTaGATCTGGATGACAGTGATACTCACAAGTACCACA +
Preference number: 6 (lower is better)
Translates to: LAFSPGGRTSCL*IWMTVILTSTT
Trigger: TGTGGTACTTGTGAGTATCACTGTCATCCAGATCCACAAGCAAGAGGTCCTCCCTCCAGGACTGAAGGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647765.1
CDS CCA 72 bp CCATACTTCAGTCCTGGAGGGAGGACCTCTTGCTTGTaGATCTGGATGACAGTGATACTCACAAGTACCACA +
Preference number: 6 (lower is better)
Translates to: PYFSPGGRTSCL*IWMTVILTSTT
Trigger: TGTGGTACTTGTGAGTATCACTGTCATCCAGATCCACAAGCAAGAGGTCCTCCCTCCAGGACTGAAGTATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301825.8
ENST00000445129.1
ENST00000456402.5
CDS CCA 72 bp CCTATCTTCAGTCCTGGAGGGAGGACCTCTTGCTTGTaGATCTGGATGACAGTGATACTCACAAGTACCACA +
Preference number: 6 (lower is better)
Translates to: PIFSPGGRTSCL*IWMTVILTSTT
Trigger: TGTGGTACTTGTGAGTATCACTGTCATCCAGATCCACAAGCAAGAGGTCCTCCCTCCAGGACTGAAGATAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439533.5
CDS CAA 72 bp AACCCTATCTTCAGTCCTGGAGGGAGGACCTCTTGCTaGTGGATCTGGATGACAGTGATACTCACAAGTACC +
Preference number: 6 (lower is better)
Translates to: NPIFSPGGRTSC*WIWMTVILTST
Trigger: GGTACTTGTGAGTATCACTGTCATCCAGATCCACAAGCAAGAGGTCCTCCCTCCAGGACTGAAGATAGGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439533.5
CDS CAA 72 bp GTGAAACCCTATCTTCAGTCCTGGAGGGAGGACCTCTaGCTTGTGGATCTGGATGACAGTGATACTCACAAG +
Preference number: 6 (lower is better)
Translates to: VKPYLQSWREDL*LVDLDDSDTHK
Trigger: CTTGTGAGTATCACTGTCATCCAGATCCACAAGCAAGAGGTCCTCCCTCCAGGACTGAAGATAGGGTTTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439533.5
CDS CAA 90 bp GGCATCCAGCACAATACCATACTTCAGTCCTGGAGGGAGGACCTCTaGCTTGTGGATCTGGATGACAGTGATACTCACAAGTACCACAAT +
Preference number: 6 (lower is better)
Translates to: GIQHNTILQSWREDL*LVDLDDSDTHKYHN
Trigger: ATTGTGGTACTTGTGAGTATCACTGTCATCCAGATCCACAAGCAAGAGGTCCTCCCTCCAGGACTGAAGTATGGTATTGTGCTGGATGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301825.8
ENST00000445129.1
ENST00000456402.5
CDS CAA 90 bp GTCAACACGGTGAAACCCTATCTTCAGTCCTGGAGGGAGGACCTCTaGCTTGTGGATCTGGATGACAGTGATACTCACAAGTACCACAAT +
Preference number: 6 (lower is better)
Translates to: VNTVKPYLQSWREDL*LVDLDDSDTHKYHN
Trigger: ATTGTGGTACTTGTGAGTATCACTGTCATCCAGATCCACAAGCAAGAGGTCCTCCCTCCAGGACTGAAGATAGGGTTTCACCGTGTTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439533.5
CDS TCA 72 bp TTCCATCCTGTGCAAAGCAGGAAGTGTTCTCTTATCTaGGGCCAATCCCTTCCCTCCATTTGGGATCTCCAT +
Preference number: 6 (lower is better)
Translates to: FHPVQSRKCSLI*GQSLPSIWDLH
Trigger: ATGGAGATCCCAAATGGAGGGAAGGGATTGGCCTCAGATAAGAGAACACTTCCTGCTTTGCACAGGATGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647765.1
CDS CCA 72 bp TTCAGTCCTGGAGGGAGGACCTCTTGCTTGTGGATCTaGATGACAGTGATACTCACAAGTACCACAATACTC +
Preference number: 6 (lower is better)
Translates to: FSPGGRTSCLWI*MTVILTSTTIL
Trigger: GAGTATTGTGGTACTTGTGAGTATCACTGTCATCCAGATCCACAAGCAAGAGGTCCTCCCTCCAGGACTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301825.8
ENST00000439533.5
ENST00000445129.1
ENST00000456402.5
ENST00000647765.1
CDS CAA 72 bp ATACCATACTTCAGTCCTGGAGGGAGGACCTCTTGCTaGTGGATCTGGATGACAGTGATACTCACAAGTACC +
Preference number: 6 (lower is better)
Translates to: IPYFSPGGRTSC*WIWMTVILTST
Trigger: GGTACTTGTGAGTATCACTGTCATCCAGATCCACAAGCAAGAGGTCCTCCCTCCAGGACTGAAGTATGGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301825.8
ENST00000445129.1
ENST00000456402.5
CDS CAA 72 bp CACAATACCATACTTCAGTCCTGGAGGGAGGACCTCTaGCTTGTGGATCTGGATGACAGTGATACTCACAAG +
Preference number: 6 (lower is better)
Translates to: HNTILQSWREDL*LVDLDDSDTHK
Trigger: CTTGTGAGTATCACTGTCATCCAGATCCACAAGCAAGAGGTCCTCCCTCCAGGACTGAAGTATGGTATTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301825.8
ENST00000445129.1
ENST00000456402.5
CDS CAA 90 bp TCCAGCACAATACCATACTTCAGTCCTGGAGGGAGGACCTCTTGCTaGTGGATCTGGATGACAGTGATACTCACAAGTACCACAATACTC +
Preference number: 6 (lower is better)
Translates to: SSTIPYFSPGGRTSC*WIWMTVILTSTTIL
Trigger: GAGTATTGTGGTACTTGTGAGTATCACTGTCATCCAGATCCACAAGCAAGAGGTCCTCCCTCCAGGACTGAAGTATGGTATTGTGCTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301825.8
ENST00000445129.1
ENST00000456402.5
CDS GCA 72 bp ACAATACCATACTTCAGTCCTGGAGGGAGGACCTCTTaGTTGTGGATCTGGATGACAGTGATACTCACAAGT +
Preference number: 6 (lower is better)
Translates to: TIPYFSPGGRTS*LWIWMTVILTS
Trigger: ACTTGTGAGTATCACTGTCATCCAGATCCACAAGCAAGAGGTCCTCCCTCCAGGACTGAAGTATGGTATTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301825.8
ENST00000445129.1
ENST00000456402.5
CDS CCA 72 bp ACATCTTTTCTCCTAGCGTGTTTCAGTCTCTTCCTCTaGCCCTCTGAGGAAATCCGATTTTGTTTCTTTGCC +
Preference number: 6 (lower is better)
Translates to: TSFLLACFSLFL*PSEEIRFCFFA
Trigger: GGCAAAGAAACAAAATCGGATTTCCTCAGAGGGCCAGAGGAAGAGACTGAAACACGCTAGGAGAAAAGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000439533.5
ENST00000456402.5
CDS CAA 72 bp GCTTCATATCAGCTATTCTTCTTTTTCAAAGTGTATTaGGGGCCAAGTCTCCTCTGTGAATTTGTAACCGTT +
Preference number: 6 (lower is better)
Translates to: ASYQLFFFFKVY*GPSLLCEFVTV
Trigger: AACGGTTACAAATTCACAGAGGAGACTTGGCCCCAAATACACTTTGAAAAAGAAGAATAGCTGATATGAAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000445129.1