RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ENTPD1 (Homo sapiens)

Ensembl gene IDs: ENSG00000138185

Ensembl transcript IDs: ENST00000371205.5, ENST00000371206.6, ENST00000371207.8, ENST00000422161.2, ENST00000453258.6, ENST00000461927.1, ENST00000483213.6, ENST00000490659.5, ENST00000494070.1, ENST00000543964.6, ENST00000635076.1, ENST00000635677.1, ENST00000639992.1

Found 889 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTGGGCTGGGCCCAGGGTCTCTGTGCTGTGTGCAGCCTAGGGACTTaGTGCCCTGTGTCCCAGCTGCTCCAGCCATGGCTGAAAGGAGCC +
Preference number: 1 (lower is better)
Translates to: VGWAQGLCAVCSLGT*CPVSQLLQPWLKGA
Trigger: GGCTCCTTTCAGCCATGGCTGGAGCAGCTGGGACACAGGGCACCAAGTCCCTAGGCTGCACACAGCACAGAGACCCTGGGCCCAGCCCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371205.5
3UTR GCA 90 bp GGCTGGGCCCAGGGTCTCTGTGCTGTGTGCAGCCTAGGGACTTGGTaGCCTGTGTCCCAGCTGCTCCAGCCATGGCTGAAAGGAGCCAAC +
Preference number: 1 (lower is better)
Translates to: GWAQGLCAVCSLGTW*PVSQLLQPWLKGAN
Trigger: GTTGGCTCCTTTCAGCCATGGCTGGAGCAGCTGGGACACAGGGCACCAAGTCCCTAGGCTGCACACAGCACAGAGACCCTGGGCCCAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371205.5
3UTR CCA 90 bp CATCACAGGCCCAGAGGCCCAGGAGGAAAAAGTGGTTTTGTGGGCTaGGCCCAGGGTCTCTGTGCTGTGTGCAGCCTAGGGACTTGGTGC +
Preference number: 1 (lower is better)
Translates to: HHRPRGPGGKSGFVG*AQGLCAVCSLGTWC
Trigger: GCACCAAGTCCCTAGGCTGCACACAGCACAGAGACCCTGGGCCCAGCCCACAAAACCACTTTTTCCTCCTGGGCCTCTGGGCCTGTGATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371205.5
3UTR CCA 90 bp CTGCTCCAGCCATGGCTGAAAGGAGCCAACATAGAGCTTGGGCTGTaGCTTCAGAGGGTAGAGGCCCCAAGCATTGGCAGCTTCCATGTG +
Preference number: 1 (lower is better)
Translates to: LLQPWLKGANIELGL*LQRVEAPSIGSFHV
Trigger: CACATGGAAGCTGCCAATGCTTGGGGCCTCTACCCTCTGAAGCCACAGCCCAAGCTCTATGTTGGCTCCTTTCAGCCATGGCTGGAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371205.5
3UTR GCA 90 bp ACTCAACATCAGCCTGAGAAAGCAGCCAGGAGGGAGGCTGTACTCTaGAAAGCCACAGGGGCGGAGCTGCACAAGACCATGGGAACCTAT +
Preference number: 1 (lower is better)
Translates to: TQHQPEKAARREAVL*KATGAELHKTMGTY
Trigger: ATAGGTTCCCATGGTCTTGTGCAGCTCCGCCCCTGTGGCTTTGCAGAGTACAGCCTCCCTCCTGGCTGCTTTCTCAGGCTGATGTTGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371205.5
3UTR CCA 90 bp CATAGAGCTTGGGCTGTGGCTTCAGAGGGTAGAGGCCCCAAGCATTaGCAGCTTCCATGTGATGTTGAGCCTGTGGGTGCAGAGATGTCA +
Preference number: 1 (lower is better)
Translates to: HRAWAVASEGRGPKH*QLPCDVEPVGAEMS
Trigger: TGACATCTCTGCACCCACAGGCTCAACATCACATGGAAGCTGCCAATGCTTGGGGCCTCTACCCTCTGAAGCCACAGCCCAAGCTCTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371205.5
3UTR CCA 90 bp AGGAAACATCAGAGGAGTGGAGTGGGATATGAGCCTGGAGAGAGCTaGCGGCCATGGATCATTGAAAGCCTTGAATGTCTGATGGGGAGG +
Preference number: 1 (lower is better)
Translates to: RKHQRSGVGYEPGES*RPWIIESLECLMGR
Trigger: CCTCCCCATCAGACATTCAAGGCTTTCAATGATCCATGGCCGCCAGCTCTCTCCAGGCTCATATCCCACTCCACTCCTCTGATGTTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371205.5
3UTR CCA 90 bp GTAGAGGCCCCAAGCATTGGCAGCTTCCATGTGATGTTGAGCCTGTaGGTGCAGAGATGTCAAGAATTGAGATTTGGGAACCTCTGCCTA +
Preference number: 1 (lower is better)
Translates to: VEAPSIGSFHVMLSL*VQRCQELRFGNLCL
Trigger: TAGGCAGAGGTTCCCAAATCTCAATTCTTGACATCTCTGCACCCACAGGCTCAACATCACATGGAAGCTGCCAATGCTTGGGGCCTCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371205.5
3UTR TCA 90 bp GGCGGAGCTGCACAAGACCATGGGAACCTATCTCTTGCATCAGCATaGCCTGAATGTGAGACATGGAGTCAAAGGAGATCATTATGGAGC +
Preference number: 1 (lower is better)
Translates to: GGAAQDHGNLSLASA*PECETWSQRRSLWS
Trigger: GCTCCATAATGATCTCCTTTGACTCCATGTCTCACATTCAGGTCATGCTGATGCAAGAGATAGGTTCCCATGGTCTTGTGCAGCTCCGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371205.5
3UTR TCA 90 bp TGTGTGACGGGTGGCAACACTTTCAGACTTGGATCCTGCACATTCTaGTGTGTAAATTCCACGATAGGGCAAAAGCATGCCACTCCACAC +
Preference number: 1 (lower is better)
Translates to: CVTGGNTFRLGSCTF*CVNSTIGQKHATPH
Trigger: GTGTGGAGTGGCATGCTTTTGCCCTATCGTGGAATTTACACATCAGAATGTGCAGGATCCAAGTCTGAAAGTGTTGCCACCCGTCACACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
3UTR TCA 90 bp TCAGTCCCCAGATCTAGAGATGGAGAGCTTGGGACAAGGTCAGAATaGAACATCACCAGTCAATCCTGCTCAACAGGTAACTCTTGCAGC +
Preference number: 1 (lower is better)
Translates to: SVPRSRDGELGTRSE*NITSQSCSTGNSCS
Trigger: GCTGCAAGAGTTACCTGTTGAGCAGGATTGACTGGTGATGTTTCATTCTGACCTTGTCCCAAGCTCTCCATCTCTAGATCTGGGGACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
3UTR TCA 90 bp GAATTGTACCTTCCAGAATTCCCACAGGACCCAGGGGGAGGTAATTaGATCAAGGGGGCTGGTCTTTCCCATGCTATTCTTGTGATAGTG +
Preference number: 1 (lower is better)
Translates to: ELYLPEFPQDPGGGN*IKGAGLSHAILVIV
Trigger: CACTATCACAAGAATAGCATGGGAAAGACCAGCCCCCTTGATTCAATTACCTCCCCCTGGGTCCTGTGGGAATTCTGGAAGGTACAATTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000371205.5
3UTR TCA 90 bp CCCAGAATTCCCACATGTTGTGGGAGGGACGCAGTGGGAGGTAATTaGATCATGGAGGCCAGTCTTTTCTGTGCTATTCTCGTGATAATA +
Preference number: 1 (lower is better)
Translates to: PRIPTCCGRDAVGGN*IMEASLFCAILVII
Trigger: TATTATCACGAGAATAGCACAGAAAAGACTGGCCTCCATGATTCAATTACCTCCCACTGCGTCCCTCCCACAACATGTGGGAATTCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371205.5
3UTR GCA 90 bp ATGGTAGACCCCAGAATGGTAGATCAACCACCAACTTGCATCTTGTaGCTGGAAAAGCTACAGACACTCAACATCAGCCTGAGAAAGCAG +
Preference number: 1 (lower is better)
Translates to: MVDPRMVDQPPTCIL*LEKLQTLNISLRKQ
Trigger: CTGCTTTCTCAGGCTGATGTTGAGTGTCTGTAGCTTTTCCAGGCACAAGATGCAAGTTGGTGGTTGATCTACCATTCTGGGGTCTACCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371205.5
3UTR CCA 90 bp GGGTCTCTTCATGTTTCCATGGTAAGGTCTATAGCTGCTGCTTCATaGAATAAGCAAACAAAGCCCATGTTGTGTGACGGGTGGCAACAC +
Preference number: 1 (lower is better)
Translates to: GSLHVSMVRSIAAAS*NKQTKPMLCDGWQH
Trigger: GTGTTGCCACCCGTCACACAACATGGGCTTTGTTTGCTTATTCCATGAAGCAGCAGCTATAGACCTTACCATGGAAACATGAAGAGACCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
3UTR CCA 90 bp GAACATATCCCTAGAAACCACTGGACAAGGAGAACAAGAGGTATATaGAATAGGTCTGATCCACCCTTACCACCTGAAGTAGAGCTGCCC +
Preference number: 1 (lower is better)
Translates to: EHIPRNHWTRRTRGI*NRSDPPLPPEVELP
Trigger: GGGCAGCTCTACTTCAGGTGGTAAGGGTGGATCAGACCTATTCCATATACCTCTTGTTCTCCTTGTCCAGTGGTTTCTAGGGATATGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371205.5
3UTR TCA 90 bp ATCCAGATGAAACTTTCCCAAGGTCTCTTGTCATGCATCTTGGACTaGATAACAGGCATCCCTGCCTTCACATCTTCATGGGAAGGCAAC +
Preference number: 1 (lower is better)
Translates to: IQMKLSQGLLSCILD*ITGIPAFTSSWEGN
Trigger: GTTGCCTTCCCATGAAGATGTGAAGGCAGGGATGCCTGTTATTCAGTCCAAGATGCATGACAAGAGACCTTGGGAAAGTTTCATCTGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371205.5
3UTR GCA 90 bp CCAAGGTCTCTTGTCATGCATCTTGGACTGAATAACAGGCATCCCTaGCTTCACATCTTCATGGGAAGGCAACAAAACCTGAGGAATACA +
Preference number: 1 (lower is better)
Translates to: PRSLVMHLGLNNRHP*LHIFMGRQQNLRNT
Trigger: TGTATTCCTCAGGTTTTGTTGCCTTCCCATGAAGATGTGAAGGCAGGGATGCCTGTTATTCAGTCCAAGATGCATGACAAGAGACCTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371205.5
3UTR GCA 90 bp GGCCTGCAAAATGTCTCCTACTTCCATTCTAGTCATTCAGCAAGGTaGCTTCCTCTGGATGCACTGTCTGTATACTTTTGCCATGTTGCA +
Preference number: 1 (lower is better)
Translates to: GLQNVSYFHSSHSAR*LPLDALSVYFCHVA
Trigger: TGCAACATGGCAAAAGTATACAGACAGTGCATCCAGAGGAAGGCACCTTGCTGAATGACTAGAATGGAAGTAGGAGACATTTTGCAGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371205.5
3UTR CCA 90 bp ACATATTTGCCTACTGTAGAAAATTCTCCTACCCACAGAGCAGGCTaGGAATGGAATGTGTGTCTGCCTTCTCCAAAGGCATCATATGGC +
Preference number: 1 (lower is better)
Translates to: TYLPTVENSPTHRAG*EWNVCLPSPKASYG
Trigger: GCCATATGATGCCTTTGGAGAAGGCAGACACACATTCCATTCCCAGCCTGCTCTGTGGGTAGGAGAATTTTCTACAGTAGGCAAATATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
3UTR CCA 90 bp TTAGCAAGGAGACTGGCAGCATTTCACCCTTGCCCTAGAGATTTGTaGAACTTAGAGCTTGAGAGAGATGACTTAGGGTATCTGGTGGAA +
Preference number: 1 (lower is better)
Translates to: LARRLAAFHPCPRDL*NLELERDDLGYLVE
Trigger: TTCCACCAGATACCCTAAGTCATCTCTCTCAAGCTCTAAGTTCCACAAATCTCTAGGGCAAGGGTGAAATGCTGCCAGTCTCCTTGCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371205.5
3UTR CCA 90 bp CTTTGTAATTTAAAGAGGAATAGGCAAATAGAGCTGCTGTGGTTCTaGTTCTCCCTGCAGGATGAAGGGGGCCTGCAAAATGTCTCCTAC +
Preference number: 1 (lower is better)
Translates to: LCNLKRNRQIELLWF*FSLQDEGGLQNVSY
Trigger: GTAGGAGACATTTTGCAGGCCCCCTTCATCCTGCAGGGAGAACCAGAACCACAGCAGCTCTATTTGCCTATTCCTCTTTAAATTACAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371205.5
3UTR TCA 90 bp CCACCTGAAGTAGAGCTGCCCAGCTGGCTTGCAGACTCACAAACATaGAAATCAATGTTTACTGCAGCAATTCATGAAACTTTGAGGCTG +
Preference number: 1 (lower is better)
Translates to: PPEVELPSWLADSQT*KSMFTAAIHETLRL
Trigger: CAGCCTCAAAGTTTCATGAATTGCTGCAGTAAACATTGATTTTCATGTTTGTGAGTCTGCAAGCCAGCTGGGCAGCTCTACTTCAGGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371205.5
3UTR TCA 90 bp TGTGAGACATGGAGTCAAAGGAGATCATTATGGAGCTTTAAAATTTaGCTGCCCCACTGGATTTCAGACTTGCATGGACCCTGTAACCCC +
Preference number: 1 (lower is better)
Translates to: CETWSQRRSLWSFKI*LPHWISDLHGPCNP
Trigger: GGGGTTACAGGGTCCATGCAAGTCTGAAATCCAGTGGGGCAGTCAAATTTTAAAGCTCCATAATGATCTCCTTTGACTCCATGTCTCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371205.5
3UTR TCA 90 bp ACTTGTGTAGAGGCTCCCCCAAGGTCCAAAGCTCCAAAGGTTTCCTaGTTATTGGTTTCATATGGGACTATGCTGAACCACCTTGTTTTC +
Preference number: 1 (lower is better)
Translates to: TCVEAPPRSKAPKVS*LLVSYGTMLNHLVF
Trigger: GAAAACAAGGTGGTTCAGCATAGTCCCATATGAAACCAATAATCAGGAAACCTTTGGAGCTTTGGACCTTGGGGGAGCCTCTACACAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635076.1
3UTR GCA 90 bp AGCCTGTGGGTGCAGAGATGTCAAGAATTGAGATTTGGGAACCTCTaGCTAGATTTCAGAATATATATGGAAACACCTGGATGTCCAGGC +
Preference number: 1 (lower is better)
Translates to: SLWVQRCQELRFGNL*LDFRIYMETPGCPG
Trigger: GCCTGGACATCCAGGTGTTTCCATATATATTCTGAAATCTAGGCAGAGGTTCCCAAATCTCAATTCTTGACATCTCTGCACCCACAGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371205.5
3UTR GCA 90 bp CATTCAGCAAGGTGCCTTCCTCTGGATGCACTGTCTGTATACTTTTaGCATGTTGCATCACATAATGATTCTGCCCACCTTCACCATTTG +
Preference number: 1 (lower is better)
Translates to: HSARCLPLDALSVYF*HVASHNDSAHLHHL
Trigger: CAAATGGTGAAGGTGGGCAGAATCATTATGTGATGCAACATGGCAAAAGTATACAGACAGTGCATCCAGAGGAAGGCACCTTGCTGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371205.5
3UTR GCA 90 bp TTCATTACTTGCAACCTGAATGTCCTTGGCCAGTTTCTGCCAGAGTaGCTGATCCTTCCCATAGCACAAGAAGCTATGTGTGTAGACATT +
Preference number: 1 (lower is better)
Translates to: FITCNLNVLGQFLPE*LILPIAQEAMCVDI
Trigger: AATGTCTACACACATAGCTTCTTGTGCTATGGGAAGGATCAGGCACTCTGGCAGAAACTGGCCAAGGACATTCAGGTTGCAAGTAATGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000483213.6
ENST00000635076.1
ENST00000639992.1
3UTR CCA 90 bp CAAACAAAGCCCATGTTGTGTGACGGGTGGCAACACTTTCAGACTTaGATCCTGCACATTCTGATGTGTAAATTCCACGATAGGGCAAAA +
Preference number: 1 (lower is better)
Translates to: QTKPMLCDGWQHFQT*ILHILMCKFHDRAK
Trigger: TTTTGCCCTATCGTGGAATTTACACATCAGAATGTGCAGGATCCAAGTCTGAAAGTGTTGCCACCCGTCACACAACATGGGCTTTGTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
3UTR CCA 90 bp GCTGCTTCATGGAATAAGCAAACAAAGCCCATGTTGTGTGACGGGTaGCAACACTTTCAGACTTGGATCCTGCACATTCTGATGTGTAAA +
Preference number: 1 (lower is better)
Translates to: AASWNKQTKPMLCDG*QHFQTWILHILMCK
Trigger: TTTACACATCAGAATGTGCAGGATCCAAGTCTGAAAGTGTTGCCACCCGTCACACAACATGGGCTTTGTTTGCTTATTCCATGAAGCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
3UTR GCA 90 bp GACCCTTGTTATGTTTTAGCAAGGAGACTGGCAGCATTTCACCCTTaGCCTAGAGATTTGTGGAACTTAGAGCTTGAGAGAGATGACTTA +
Preference number: 1 (lower is better)
Translates to: DPCYVLARRLAAFHP*PRDLWNLELERDDL
Trigger: TAAGTCATCTCTCTCAAGCTCTAAGTTCCACAAATCTCTAGGGCAAGGGTGAAATGCTGCCAGTCTCCTTGCTAAAACATAACAAGGGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371205.5
3UTR CCA 90 bp CCCAAGGTCCAAAGCTCCAAAGGTTTCCTGATTATTGGTTTCATATaGGACTATGCTGAACCACCTTGTTTTCTGACTGAATTTGCCCAG +
Preference number: 1 (lower is better)
Translates to: PKVQSSKGFLIIGFI*DYAEPPCFLTEFAQ
Trigger: CTGGGCAAATTCAGTCAGAAAACAAGGTGGTTCAGCATAGTCCCATATGAAACCAATAATCAGGAAACCTTTGGAGCTTTGGACCTTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635076.1
3UTR CCA 90 bp CAGCTGTCATGTTCTAACAGTTGGAATTTGAATCAGAGCAACTATTaGTATTTGAATCAGAGAGGGGCCAGACCAGTTTGGGTGAAACTC +
Preference number: 1 (lower is better)
Translates to: QLSCSNSWNLNQSNY*YLNQRGARPVWVKL
Trigger: GAGTTTCACCCAAACTGGTCTGGCCCCTCTCTGATTCAAATACCAATAGTTGCTCTGATTCAAATTCCAACTGTTAGAACATGACAGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371205.5
3UTR CCA 90 bp TGTGATGTTGAGCCTGTGGGTGCAGAGATGTCAAGAATTGAGATTTaGGAACCTCTGCCTAGATTTCAGAATATATATGGAAACACCTGG +
Preference number: 1 (lower is better)
Translates to: CDVEPVGAEMSRIEI*EPLPRFQNIYGNTW
Trigger: CCAGGTGTTTCCATATATATTCTGAAATCTAGGCAGAGGTTCCCAAATCTCAATTCTTGACATCTCTGCACCCACAGGCTCAACATCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371205.5
3UTR CCA 90 bp ATGTCTCCTACTTCCATTCTAGTCATTCAGCAAGGTGCCTTCCTCTaGATGCACTGTCTGTATACTTTTGCCATGTTGCATCACATAATG +
Preference number: 1 (lower is better)
Translates to: MSPTSILVIQQGAFL*MHCLYTFAMLHHIM
Trigger: CATTATGTGATGCAACATGGCAAAAGTATACAGACAGTGCATCCAGAGGAAGGCACCTTGCTGAATGACTAGAATGGAAGTAGGAGACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371205.5
3UTR TCA 90 bp AACAGACCAGCTTTCTGCCTCCCTTTCTATGAATACCAAGTCCCATaGACCTTGTATTCATGTGGAGTTTTAAGTGCATGCTTGGAAGTT +
Preference number: 1 (lower is better)
Translates to: NRPAFCLPFYEYQVP*TLYSCGVLSACLEV
Trigger: AACTTCCAAGCATGCACTTAAAACTCCACATGAATACAAGGTTCATGGGACTTGGTATTCATAGAAAGGGAGGCAGAAAGCTGGTCTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
3UTR TCA 90 bp CTCTTTGGAATGATAATGTCATCTAGACCTTTGATACGCAAAGTGTaGTTCCTGGACAGATGTATTGGCTTTACCTGGCAGCTTGTTGGA +
Preference number: 1 (lower is better)
Translates to: LFGMIMSSRPLIRKV*FLDRCIGFTWQLVG
Trigger: TCCAACAAGCTGCCAGGTAAAGCCAATACATCTGTCCAGGAATCACACTTTGCGTATCAAAGGTCTAGATGACATTATCATTCCAAAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371205.5
3UTR GCA 90 bp ATAAGTCCCACAAGATCTGGTGGGTTTATGAAGAGTTTCTGCTTTTaGTTCTTCCTCATTTTGCTCTTGATGCCACCACGTAAGAAGTAC +
Preference number: 1 (lower is better)
Translates to: ISPTRSGGFMKSFCF*FFLILLLMPPRKKY
Trigger: GTACTTCTTACGTGGTGGCATCAAGAGCAAAATGAGGAAGAAGCAAAAGCAGAAACTCTTCATAAACCCACCAGATCTTGTGGGACTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371205.5
3UTR TCA 90 bp CTGAGTGTTCCACTCTGTAGCATTTGGGTATCACCTAGGAATATGTaGTTTATTGACATACCTGCTTTGGGTGGGATTGAGAACTGTATT +
Preference number: 1 (lower is better)
Translates to: LSVPLCSIWVSPRNM*FIDIPALGGIENCI
Trigger: AATACAGTTCTCAATCCCACCCAAAGCAGGTATGTCAATAAATCACATATTCCTAGGTGATACCCAAATGCTACAGAGTGGAACACTCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
3UTR GCA 90 bp AAGCCAGGGGTATGGGAACCACTGATTAGCATCATATGCCAGATGTaGTTCCATCCAAAGCACATGAACAGAATGATATTAAATTACAAG +
Preference number: 1 (lower is better)
Translates to: KPGVWEPLISIICQM*FHPKHMNRMILNYK
Trigger: CTTGTAATTTAATATCATTCTGTTCATGTGCTTTGGATGGAAGCACATCTGGCATATGATGCTAATCAGTGGTTCCCATACCCCTGGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
3UTR GCA 90 bp AAAATTAGGAAGCCAGGGGTATGGGAACCACTGATTAGCATCATATaGCAGATGTGCTTCCATCCAAAGCACATGAACAGAATGATATTA +
Preference number: 1 (lower is better)
Translates to: KIRKPGVWEPLISII*QMCFHPKHMNRMIL
Trigger: TAATATCATTCTGTTCATGTGCTTTGGATGGAAGCACATCTGGCATATGATGCTAATCAGTGGTTCCCATACCCCTGGCTTCCTAATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
3UTR CCA 90 bp TTTAAAACCTATACAAGCACAAAGTACAAAGGAGAAAGGTGTAGCTaGGAAAAACTCATGAAAGAGACAGTATCTGCCGAAGTCCTTGAG +
Preference number: 1 (lower is better)
Translates to: FKTYTSTKYKGERCS*EKLMKETVSAEVLE
Trigger: CTCAAGGACTTCGGCAGATACTGTCTCTTTCATGAGTTTTTCCCAGCTACACCTTTCTCCTTTGTACTTTGTGCTTGTATAGGTTTTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000635076.1
ENST00000639992.1
3UTR TCA 90 bp AAAGTGTTTAGAAAAGAAAAAGCAATAGGCTTCAACCAGAAGACATaGGTTGGAGTATCTGCTCTGCCATGTAGTAGTTTGTGTGATCCT +
Preference number: 1 (lower is better)
Translates to: KVFRKEKAIGFNQKT*VGVSALPCSSLCDP
Trigger: AGGATCACACAAACTACTACATGGCAGAGCAGATACTCCAACTCATGTCTTCTGGTTGAAGCCTATTGCTTTTTCTTTTCTAAACACTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
3UTR CCA 90 bp TTAGTAAGCAAAGCTAGTTATGAGCAGCTGTCATGTTCTAACAGTTaGAATTTGAATCAGAGCAACTATTGGTATTTGAATCAGAGAGGG +
Preference number: 1 (lower is better)
Translates to: LVSKASYEQLSCSNS*NLNQSNYWYLNQRG
Trigger: CCCTCTCTGATTCAAATACCAATAGTTGCTCTGATTCAAATTCCAACTGTTAGAACATGACAGCTGCTCATAACTAGCTTTGCTTACTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371205.5
3UTR CAA 90 bp TGTGGGCTGGGCCCAGGGTCTCTGTGCTGTGTGCAGCCTAGGGACTaGGTGCCCTGTGTCCCAGCTGCTCCAGCCATGGCTGAAAGGAGC +
Preference number: 2 (lower is better)
Translates to: CGLGPGSLCCVQPRD*VPCVPAAPAMAERS
Trigger: GCTCCTTTCAGCCATGGCTGGAGCAGCTGGGACACAGGGCACCAAGTCCCTAGGCTGCACACAGCACAGAGACCCTGGGCCCAGCCCACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371205.5
3UTR-3UTR CCA 90 bp GTGGTGCGGACCAGCTCGCCAGCAACAGAAGGGTTTGTAGTCGGCCTGGCAGTGCGTCAAGACTGGCCCTaGCAGACAGGGAAGGATGGC +
Preference number: 2 (lower is better)
Translates to: VVRTSSPATEGFVVGLAVRQDWP*QTGKDG
Trigger: GCCATCCTTCCCTGTCTGCCAGGGCCAGTCTTGACG...CACTGCCAGGCCGACTACAAACCCTTCTGTTGCTGGCGAGCTGGTCCGCACCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371205.5
3UTR-3UTR CCA 90 bp CAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGGAAGGATGGCCCGTCAAGACTGGCCCTaGCAGACAGGGAAGGATGGC +
Preference number: 2 (lower is better)
Translates to: QGSFTLVKTGPGRQGRMARQDWP*QTGKDG
Trigger: GCCATCCTTCCCTGTCTGCCAGGGCCAGTCTTGACG...GGCCATCCTTCCCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
3UTR-3UTR TCA 90 bp GTGGTGCGGACCAGCTCGCCAGCAACAGAAGGGTTTGTAGTCGGCCTGGCAGTGAAAGCCCATGTTGTGTaGCGGGTGGCAACACTTTCA +
Preference number: 2 (lower is better)
Translates to: VVRTSSPATEGFVVGLAVKAHVV*RVATLS
Trigger: TGAAAGTGTTGCCACCCGTCACACAACATGGGCTTT...CACTGCCAGGCCGACTACAAACCCTTCTGTTGCTGGCGAGCTGGTCCGCACCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371205.5
3UTR-3UTR TCA 90 bp CAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGGAAGGATGGCCAGGGAAGGATGGCCTTaGACACTGCGATGGAGGAAA +
Preference number: 2 (lower is better)
Translates to: QGSFTLVKTGPGRQGRMAREGWP*TLRWRK
Trigger: TTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCT...GGCCATCCTTCCCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
3UTR-3UTR CCA 90 bp ACTTGCAACCTGAATGTCCTTGGCCAGTTTCTGCCAGAGTGCCTGATCCTTCCCCGTCAAGACTGGCCCTaGCAGACAGGGAAGGATGGC +
Preference number: 2 (lower is better)
Translates to: TCNLNVLGQFLPECLILPRQDWP*QTGKDG
Trigger: GCCATCCTTCCCTGTCTGCCAGGGCCAGTCTTGACG...GGGAAGGATCAGGCACTCTGGCAGAAACTGGCCAAGGACATTCAGGTTGCAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635076.1
ENST00000639992.1
3UTR-3UTR TCA 90 bp ATATATGGAAACACCTGGATGTCCAGGCAAAAGTTTGCTGCAGGGGCAGAGCCCGAGTGGAGTGGGATATaGGCCTGGAGAGAGCTGGCG +
Preference number: 2 (lower is better)
Translates to: IYGNTWMSRQKFAAGAEPEWSGI*AWRELA
Trigger: CGCCAGCTCTCTCCAGGCTCATATCCCACTCCACTC...GGGCTCTGCCCCTGCAGCAAACTTTTGCCTGGACATCCAGGTGTTTCCATATAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371205.5
3UTR-3UTR CCA 90 bp GGGTGCAGGGTCTCTTCATGTTTCCATGGTAAGGTCTATAGCTGCTGCTTCATGCGTCAAGACTGGCCCTaGCAGACAGGGAAGGATGGC +
Preference number: 2 (lower is better)
Translates to: GCRVSSCFHGKVYSCCFMRQDWP*QTGKDG
Trigger: GCCATCCTTCCCTGTCTGCCAGGGCCAGTCTTGACG...CATGAAGCAGCAGCTATAGACCTTACCATGGAAACATGAAGAGACCCTGCACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
3UTR-3UTR TCA 90 bp TGGGAGCCCGAGGCAATAGGATCACCTGAGATTGGGAGTTGGAGACCAGCCTGGAGCCATTTGGGCAAATaGCTTAACCTCTCTGAACCT +
Preference number: 2 (lower is better)
Translates to: WEPEAIGSPEIGSWRPAWSHLGK*LNLSEP
Trigger: AGGTTCAGAGAGGTTAAGTCATTTGCCCAAATGGCT...CCAGGCTGGTCTCCAACTCCCAATCTCAGGTGATCCTATTGCCTCGGGCTCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
3UTR-3UTR CCA 90 bp CAGTTCCTGAGATTCTTCTTTCAGCCAGCTCAGCCTCCTATCACAGGACTCAAGCACACTCGTCAAGACTaGCCCTGGCAGACAGGGAAG +
Preference number: 2 (lower is better)
Translates to: QFLRFFFQPAQPPITGLKHTRQD*PWQTGK
Trigger: CTTCCCTGTCTGCCAGGGCCAGTCTTGACGAGTGTG...CTTGAGTCCTGTGATAGGAGGCTGAGCTGGCTGAAAGAAGAATCTCAGGAACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
3UTR-3UTR CCA 90 bp TGGCAGACAGGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCCTGCAACCTGAATGTCCTTaGCCAGTTTCTGCCAGAGTG +
Preference number: 2 (lower is better)
Translates to: WQTGKDGLEHCDGGKCSLQPECP*PVSARV
Trigger: CACTCTGGCAGAAACTGGCCAAGGACATTCAGGTTG...CAGGGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTGTCTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635076.1
ENST00000639992.1
3UTR CAA 90 bp CTTCAGAGGGTAGAGGCCCCAAGCATTGGCAGCTTCCATGTGATGTaGAGCCTGTGGGTGCAGAGATGTCAAGAATTGAGATTTGGGAAC +
Preference number: 2 (lower is better)
Translates to: LQRVEAPSIGSFHVM*SLWVQRCQELRFGN
Trigger: GTTCCCAAATCTCAATTCTTGACATCTCTGCACCCACAGGCTCAACATCACATGGAAGCTGCCAATGCTTGGGGCCTCTACCCTCTGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371205.5
3UTR-3UTR TCA 90 bp CAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGGAAGGATGGCCGAATATGTGATTTATTaGCATACCTGCTTTGGGTGG +
Preference number: 2 (lower is better)
Translates to: QGSFTLVKTGPGRQGRMAEYVIY*HTCFGW
Trigger: CCACCCAAAGCAGGTATGTCAATAAATCACATATTC...GGCCATCCTTCCCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
3UTR-3UTR GCA 90 bp CCTTGGCCAGTTTCTGCCAGAGTGCCTGATCCTTCCCATAGCACAAGAAGCTATGATGGCCTTGAACACTaGGATGGAGGAAAATGCTCC +
Preference number: 2 (lower is better)
Translates to: PWPVSARVPDPSHSTRSYDGLEH*DGGKCS
Trigger: GGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATC...ATAGCTTCTTGTGCTATGGGAAGGATCAGGCACTCTGGCAGAAACTGGCCAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635076.1
ENST00000639992.1
3UTR CAA 90 bp CCCCATCAGCTCAACAGTCAGTCCCCAGATCTAGAGATGGAGAGCTaGGGACAAGGTCAGAATGAAACATCACCAGTCAATCCTGCTCAA +
Preference number: 2 (lower is better)
Translates to: PHQLNSQSPDLEMES*GQGQNETSPVNPAQ
Trigger: TTGAGCAGGATTGACTGGTGATGTTTCATTCTGACCTTGTCCCAAGCTCTCCATCTCTAGATCTGGGGACTGACTGTTGAGCTGATGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
3UTR-3UTR GCA 90 bp TGGCAGACAGGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCCTGAAGATCTATGGTTTCTaGCTACCCAGGATAGTCTTG +
Preference number: 2 (lower is better)
Translates to: WQTGKDGLEHCDGGKCSLKIYGF*LPRIVL
Trigger: CAAGACTATCCTGGGTAGGCAGAAACCATAGATCTT...CAGGGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTGTCTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
3UTR-3UTR CCA 90 bp TGGCAGACAGGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCCTGGGAGAAAGGTGTAGCTaGGAAAAACTCATGAAAGAG +
Preference number: 2 (lower is better)
Translates to: WQTGKDGLEHCDGGKCSLGERCS*EKLMKE
Trigger: CTCTTTCATGAGTTTTTCCCAGCTACACCTTTCTCC...CAGGGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTGTCTGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000635076.1
ENST00000639992.1
3UTR-3UTR TCA 90 bp ACTTGCAACCTGAATGTCCTTGGCCAGTTTCTGCCAGAGTGCCTGATCCTTCCCGAAAGCATGGGTCCCTaGGAATTTCATTACTTGCAA +
Preference number: 2 (lower is better)
Translates to: TCNLNVLGQFLPECLILPESMGP*EFHYLQ
Trigger: TTGCAAGTAATGAAATTCTCAGGGACCCATGCTTTC...GGGAAGGATCAGGCACTCTGGCAGAAACTGGCCAAGGACATTCAGGTTGCAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000483213.6
ENST00000635076.1
ENST00000639992.1
3UTR-3UTR GCA 90 bp TTCCCACATGTTGTGGGAGGGACGCAGTGGGAGGTAATTGAATCATGGAGGCCATTGGAGTATCTGCTCTaGCATGTAGTAGTTTGTGTG +
Preference number: 2 (lower is better)
Translates to: FPHVVGGTQWEVIESWRPLEYLL*HVVVCV
Trigger: CACACAAACTACTACATGGCAGAGCAGATACTCCAA...TGGCCTCCATGATTCAATTACCTCCCACTGCGTCCCTCCCACAACATGTGGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371205.5
3UTR-3UTR GCA 90 bp ACTTGCAACCTGAATGTCCTTGGCCAGTTTCTGCCAGAGTGCCTGATCCTTCCCAGACATTGTAGTCCTTaGCATAGAGGCGAAATTGCA +
Preference number: 2 (lower is better)
Translates to: TCNLNVLGQFLPECLILPRHCSP*HRGEIA
Trigger: TGCAATTTCGCCTCTATGGCAAGGACTACAATGTCT...GGGAAGGATCAGGCACTCTGGCAGAAACTGGCCAAGGACATTCAGGTTGCAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000483213.6
ENST00000635076.1
ENST00000639992.1
3UTR-3UTR GCA 90 bp CCCATTGAAGGCACACTGGGAGTAAGGGCAGTAACTGGTGTTGAAGAGCTCCAGAGACATTGTAGTCCTTaGCATAGAGGCGAAATTGCA +
Preference number: 2 (lower is better)
Translates to: PIEGTLGVRAVTGVEELQRHCSP*HRGEIA
Trigger: TGCAATTTCGCCTCTATGGCAAGGACTACAATGTCT...CTGGAGCTCTTCAACACCAGTTACTGCCCTTACTCCCAGTGTGCCTTCAATGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635076.1
ENST00000639992.1
3UTR-3UTR CCA 90 bp ATCCTGCACATTCTGATGTGTAAATTCCACGATAGGGCAAAAGCATGCCACTCCACCCACAGAGCAGGCTaGGAATGGAATGTGTGTCTG +
Preference number: 2 (lower is better)
Translates to: ILHILMCKFHDRAKACHSTHRAG*EWNVCL
Trigger: CAGACACACATTCCATTCCCAGCCTGCTCTGTGGGT...GGAGTGGCATGCTTTTGCCCTATCGTGGAATTTACACATCAGAATGTGCAGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
3UTR-3UTR CCA 90 bp TACTTGCAACCTGAATGTCCTTGGCCAGTTTCTGCCAGAGTGCCTGATCCTTCCTTGCAGAGCATTATCTaGGGACTCGATAGTCTGGTT +
Preference number: 2 (lower is better)
Translates to: YLQPECPWPVSARVPDPSLQSII*GLDSLV
Trigger: AACCAGACTATCGAGTCCCCAGATAATGCTCTGCAA...GGAAGGATCAGGCACTCTGGCAGAAACTGGCCAAGGACATTCAGGTTGCAAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000483213.6
ENST00000635076.1
ENST00000639992.1
3UTR-3UTR CCA 90 bp CCTTGGCCAGTTTCTGCCAGAGTGCCTGATCCTTCCCATAGCACAAGAAGCTATTTGCAGAGCATTATCTaGGGACTCGATAGTCTGGTT +
Preference number: 2 (lower is better)
Translates to: PWPVSARVPDPSHSTRSYLQSII*GLDSLV
Trigger: AACCAGACTATCGAGTCCCCAGATAATGCTCTGCAA...ATAGCTTCTTGTGCTATGGGAAGGATCAGGCACTCTGGCAGAAACTGGCCAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000483213.6
ENST00000635076.1
ENST00000639992.1
3UTR CAA 90 bp ACCAATCTTATTTCACCTACCCCACCCAGAGTGGCCCAAAGCAGATaGCTGGATCTGCCTCTAAACCAACCTTCCTGCCAAAATAATTGG +
Preference number: 2 (lower is better)
Translates to: TNLISPTPPRVAQSR*LDLPLNQPSCQNNW
Trigger: CCAATTATTTTGGCAGGAAGGTTGGTTTAGAGGCAGATCCAGCAATCTGCTTTGGGCCACTCTGGGTGGGGTAGGTGAAATAAGATTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
3UTR-3UTR TCA 90 bp GTATCTGCCGAAGTCCTTGAGGCAAAGGATATTGAATACCTCCAAAAGAAAGGCAGGGAAGGATGGCCTTaGACACTGCGATGGAGGAAA +
Preference number: 2 (lower is better)
Translates to: VSAEVLEAKDIEYLQKKGREGWP*TLRWRK
Trigger: TTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCT...GCCTTTCTTTTGGAGGTATTCAATATCCTTTGCCTCAAGGACTTCGGCAGATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000635076.1
ENST00000639992.1
3UTR-3UTR TCA 90 bp TGGCAGACAGGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCCTGTCACCTAGGAATATGTaGTTTATTGACATACCTGCT +
Preference number: 2 (lower is better)
Translates to: WQTGKDGLEHCDGGKCSLSPRNM*FIDIPA
Trigger: AGCAGGTATGTCAATAAATCACATATTCCTAGGTGA...CAGGGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTGTCTGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
3UTR-3UTR TCA 90 bp TACTTGCAACCTGAATGTCCTTGGCCAGTTTCTGCCAGAGTGCCTGATCCTTCCGCTCCAAAGGTTTCCTaGTTATTGGTTTCATATGGG +
Preference number: 2 (lower is better)
Translates to: YLQPECPWPVSARVPDPSAPKVS*LLVSYG
Trigger: CCCATATGAAACCAATAATCAGGAAACCTTTGGAGC...GGAAGGATCAGGCACTCTGGCAGAAACTGGCCAAGGACATTCAGGTTGCAAGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000483213.6
ENST00000635076.1
ENST00000639992.1
3UTR-3UTR CCA 90 bp CTTGAGCACACAGCGTGGTACACCACAAATGCTCAACCAACAGCAGCGATGACAGGAGAAAGGTGTAGCTaGGAAAAACTCATGAAAGAG +
Preference number: 2 (lower is better)
Translates to: LEHTAWYTTNAQPTAAMTGERCS*EKLMKE
Trigger: CTCTTTCATGAGTTTTTCCCAGCTACACCTTTCTCC...TGTCATCGCTGCTGTTGGTTGAGCATTTGTGGTGTACCACGCTGTGTGCTCAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
3UTR-3UTR CCA 90 bp AACCTGAATGTCCTTGGCCAGTTTCTGCCAGAGTGCCTGATCCTTCCCATAGCAGGAGAAAGGTGTAGCTaGGAAAAACTCATGAAAGAG +
Preference number: 2 (lower is better)
Translates to: NLNVLGQFLPECLILPIAGERCS*EKLMKE
Trigger: CTCTTTCATGAGTTTTTCCCAGCTACACCTTTCTCC...TGCTATGGGAAGGATCAGGCACTCTGGCAGAAACTGGCCAAGGACATTCAGGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635076.1
ENST00000639992.1
3UTR-3UTR CCA 90 bp TTTCCCCATCAGCTCAACAGTCAGTCCCCAGATCTAGAGATGGAGAGCTTGGGAATAGCTGCTGCTTCATaGAATAAGCAAACAAAGCCC +
Preference number: 2 (lower is better)
Translates to: FPHQLNSQSPDLEMESLGIAAAS*NKQTKP
Trigger: GGGCTTTGTTTGCTTATTCCATGAAGCAGCAGCTAT...TCCCAAGCTCTCCATCTCTAGATCTGGGGACTGACTGTTGAGCTGATGGGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
3UTR-3UTR CCA 90 bp GTATCTGCCGAAGTCCTTGAGGCAAAGGATATTGAATACCTCCAAAAGAAAGGCAGTGGGAGAGAGGTGTaGACAATGGTTGCTCAGCTG +
Preference number: 2 (lower is better)
Translates to: VSAEVLEAKDIEYLQKKGSGREV*TMVAQL
Trigger: CAGCTGAGCAACCATTGTCCACACCTCTCTCCCACT...GCCTTTCTTTTGGAGGTATTCAATATCCTTTGCCTCAAGGACTTCGGCAGATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635076.1
ENST00000639992.1
3UTR CAA 90 bp AGGTCTATAGCTGCTGCTTCATGGAATAAGCAAACAAAGCCCATGTaGTGTGACGGGTGGCAACACTTTCAGACTTGGATCCTGCACATT +
Preference number: 2 (lower is better)
Translates to: RSIAAASWNKQTKPM*CDGWQHFQTWILHI
Trigger: AATGTGCAGGATCCAAGTCTGAAAGTGTTGCCACCCGTCACACAACATGGGCTTTGTTTGCTTATTCCATGAAGCAGCAGCTATAGACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
3UTR CAA 90 bp AGAATGGTAGACCCCAGAATGGTAGATCAACCACCAACTTGCATCTaGTGCCTGGAAAAGCTACAGACACTCAACATCAGCCTGAGAAAG +
Preference number: 2 (lower is better)
Translates to: RMVDPRMVDQPPTCI*CLEKLQTLNISLRK
Trigger: CTTTCTCAGGCTGATGTTGAGTGTCTGTAGCTTTTCCAGGCACAAGATGCAAGTTGGTGGTTGATCTACCATTCTGGGGTCTACCATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371205.5
3UTR CAA 90 bp GTTTTAGCAAGGAGACTGGCAGCATTTCACCCTTGCCCTAGAGATTaGTGGAACTTAGAGCTTGAGAGAGATGACTTAGGGTATCTGGTG +
Preference number: 2 (lower is better)
Translates to: VLARRLAAFHPCPRD*WNLELERDDLGYLV
Trigger: CACCAGATACCCTAAGTCATCTCTCTCAAGCTCTAAGTTCCACAAATCTCTAGGGCAAGGGTGAAATGCTGCCAGTCTCCTTGCTAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371205.5
3UTR-3UTR TCA 90 bp TTCCCACATGTTGTGGGAGGGACGCAGTGGGAGGTAATTGAATCATGGAGGCCAGGCTTTAAAACTCAGTaGACTATCTTTATGGTACAG +
Preference number: 2 (lower is better)
Translates to: FPHVVGGTQWEVIESWRPGFKTQ*TIFMVQ
Trigger: CTGTACCATAAAGATAGTTCACTGAGTTTTAAAGCC...TGGCCTCCATGATTCAATTACCTCCCACTGCGTCCCTCCCACAACATGTGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371205.5
3UTR-3UTR TCA 90 bp GACTTGCATGGACCCTGTAACCCCTTTGTTTTGGCCAATTTCTCTCATTTGGAAGTTGAGAAGACAACCTaGGTGGTGTTGGGTGAACAG +
Preference number: 2 (lower is better)
Translates to: DLHGPCNPFVLANFSHLEVEKTT*VVLGEQ
Trigger: CTGTTCACCCAACACCACTCAGGTTGTCTTCTCAAC...TTCCAAATGAGAGAAATTGGCCAAAACAAAGGGGTTACAGGGTCCATGCAAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371205.5
3UTR-3UTR TCA 90 bp AATCCCATTGAAGGCACACTGGGAGTAAGGGCAGTAACTGGTGTTGAAGAGCTCGCTCCAAAGGTTTCCTaGTTATTGGTTTCATATGGG +
Preference number: 2 (lower is better)
Translates to: NPIEGTLGVRAVTGVEELAPKVS*LLVSYG
Trigger: CCCATATGAAACCAATAATCAGGAAACCTTTGGAGC...GAGCTCTTCAACACCAGTTACTGCCCTTACTCCCAGTGTGCCTTCAATGGGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635076.1
ENST00000639992.1
3UTR-3UTR TCA 90 bp TTCAAACTGCTGGAATGGAAGAGTCATCTCAAATCTCTTGGTGCAGGGGGTCTTGCAAGAAAATCCCATTaGAGGCACACTGGGAGTAAG +
Preference number: 2 (lower is better)
Translates to: FKLLEWKSHLKSLGAGGLARKSH*RHTGSK
Trigger: CTTACTCCCAGTGTGCCTTCAATGGGATTTTCTTGC...AAGACCCCCTGCACCAAGAGATTTGAGATGACTCTTCCATTCCAGCAGTTTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000635076.1
ENST00000639992.1
3UTR-3UTR GCA 90 bp GTATCTGCCGAAGTCCTTGAGGCAAAGGATATTGAATACCTCCAAAAGAAAGGCGATGGCCTTGAACACTaGGATGGAGGAAAATGCTCC +
Preference number: 2 (lower is better)
Translates to: VSAEVLEAKDIEYLQKKGDGLEH*DGGKCS
Trigger: GGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATC...GCCTTTCTTTTGGAGGTATTCAATATCCTTTGCCTCAAGGACTTCGGCAGATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000635076.1
ENST00000639992.1
3UTR-3UTR CCA 90 bp GAATGTCCTTGGCCAGTTTCTGCCAGAGTGCCTGATCCTTCCCATAGCACAAGATCGATAGTCTGGTTTTaGGGTACAAAAGTGACTTGT +
Preference number: 2 (lower is better)
Translates to: ECPWPVSARVPDPSHSTRSIVWF*GTKVTC
Trigger: ACAAGTCACTTTTGTACCCCAAAACCAGACTATCGA...TCTTGTGCTATGGGAAGGATCAGGCACTCTGGCAGAAACTGGCCAAGGACATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000483213.6
ENST00000635076.1
ENST00000639992.1
3UTR-3UTR GCA 90 bp AGACAGTATCTGCCGAAGTCCTTGAGGCAAAGGATATTGAATACCTCCAAAAGAGATGGCCTTGAACACTaGGATGGAGGAAAATGCTCC +
Preference number: 2 (lower is better)
Translates to: RQYLPKSLRQRILNTSKRDGLEH*DGGKCS
Trigger: GGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATC...TCTTTTGGAGGTATTCAATATCCTTTGCCTCAAGGACTTCGGCAGATACTGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000635076.1
ENST00000639992.1
3UTR-3UTR CCA 90 bp GACTTGCATGGACCCTGTAACCCCTTTGTTTTGGCCAATTTCTCTCATTTGGAAATGTTGTGTGACGGGTaGCAACACTTTCAGACTTGG +
Preference number: 2 (lower is better)
Translates to: DLHGPCNPFVLANFSHLEMLCDG*QHFQTW
Trigger: CCAAGTCTGAAAGTGTTGCCACCCGTCACACAACAT...TTCCAAATGAGAGAAATTGGCCAAAACAAAGGGGTTACAGGGTCCATGCAAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371205.5
3UTR-3UTR CCA 90 bp AATGTCCTTGGCCAGTTTCTGCCAGAGTGCCTGATCCTTCCCATAGCACAAGAATCGATAGTCTGGTTTTaGGGTACAAAAGTGACTTGT +
Preference number: 2 (lower is better)
Translates to: NVLGQFLPECLILPIAQESIVWF*GTKVTC
Trigger: ACAAGTCACTTTTGTACCCCAAAACCAGACTATCGA...TTCTTGTGCTATGGGAAGGATCAGGCACTCTGGCAGAAACTGGCCAAGGACATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000483213.6
ENST00000635076.1
ENST00000639992.1
3UTR CAA 90 bp GATCTCCTGGGGCACAGACAACTGACAAAAGAAACACTTGGATTGTaGTATAAGAGGAGTGAGCTTTGTAAATACCACGTTAGCTGGCCT +
Preference number: 2 (lower is better)
Translates to: DLLGHRQLTKETLGL*YKRSELCKYHVSWP
Trigger: AGGCCAGCTAACGTGGTATTTACAAAGCTCACTCCTCTTATACAACAATCCAAGTGTTTCTTTTGTCAGTTGTCTGTGCCCCAGGAGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371205.5
3UTR CAA 90 bp AGGGATCTCCTGGGGCACAGACAACTGACAAAAGAAACACTTGGATaGTTGTATAAGAGGAGTGAGCTTTGTAAATACCACGTTAGCTGG +
Preference number: 2 (lower is better)
Translates to: RDLLGHRQLTKETLG*LYKRSELCKYHVSW
Trigger: CCAGCTAACGTGGTATTTACAAAGCTCACTCCTCTTATACAACAATCCAAGTGTTTCTTTTGTCAGTTGTCTGTGCCCCAGGAGATCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371205.5
3UTR CAA 90 bp GCAGTAACTGGTGTTGAAGAGCTCCAGGATGCTTTGATGGCATTGTaGATAGTTTCCAATACCCTGGATTTCAAACTGCTGGAATGGAAG +
Preference number: 2 (lower is better)
Translates to: AVTGVEELQDALMAL*IVSNTLDFKLLEWK
Trigger: CTTCCATTCCAGCAGTTTGAAATCCAGGGTATTGGAAACTATCAACAATGCCATCAAAGCATCCTGGAGCTCTTCAACACCAGTTACTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635076.1
ENST00000639992.1
3UTR-3UTR TCA 90 bp CCACCATTCCTGGTATCAGTCCAGGTAAAATATATTACAGCTCTTTACTGGAGCTGCAAATCTCAGGTCTaGGTGTTCCACTCTGTAGCA +
Preference number: 2 (lower is better)
Translates to: PPFLVSVQVKYITALYWSCKSQV*VFHSVA
Trigger: TGCTACAGAGTGGAACACTCAGACCTGAGATTTGCA...GCTCCAGTAAAGAGCTGTAATATATTTTACCTGGACTGATACCAGGAATGGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371205.5
3UTR-3UTR TCA 90 bp CAAGAAAATCCCATTGAAGGCACACTGGGAGTAAGGGCAGTAACTGGTGTTGAAGCTCCAAAGGTTTCCTaGTTATTGGTTTCATATGGG +
Preference number: 2 (lower is better)
Translates to: QENPIEGTLGVRAVTGVEAPKVS*LLVSYG
Trigger: CCCATATGAAACCAATAATCAGGAAACCTTTGGAGC...TTCAACACCAGTTACTGCCCTTACTCCCAGTGTGCCTTCAATGGGATTTTCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635076.1
ENST00000639992.1
3UTR-3UTR TCA 90 bp CAAGAAAATCCCATTGAAGGCACACTGGGAGTAAGGGCAGTAACTGGTGTTGAAGAAAGCATGGGTCCCTaGGAATTTCATTACTTGCAA +
Preference number: 2 (lower is better)
Translates to: QENPIEGTLGVRAVTGVEESMGP*EFHYLQ
Trigger: TTGCAAGTAATGAAATTCTCAGGGACCCATGCTTTC...TTCAACACCAGTTACTGCCCTTACTCCCAGTGTGCCTTCAATGGGATTTTCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635076.1
ENST00000639992.1
3UTR-3UTR TCA 90 bp GTATCTGCCGAAGTCCTTGAGGCAAAGGATATTGAATACCTCCAAAAGAAAGGCTCAGTCACCTTTTCCTaGGAGACTTTCTCTGATGTC +
Preference number: 2 (lower is better)
Translates to: VSAEVLEAKDIEYLQKKGSVTFS*ETFSDV
Trigger: GACATCAGAGAAAGTCTCTCAGGAAAAGGTGACTGA...GCCTTTCTTTTGGAGGTATTCAATATCCTTTGCCTCAAGGACTTCGGCAGATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635076.1
ENST00000639992.1
3UTR-3UTR CCA 90 bp CTGTTATTAGAATGGCCTGTCCAGAAGACAGCCAAATACATCCTTCAAACAGACGTACATGGTAGGCTTTaGCTCAGCCATTTGGGCAAA +
Preference number: 2 (lower is better)
Translates to: LLLEWPVQKTAKYILQTDVHGRL*LSHLGK
Trigger: TTTGCCCAAATGGCTGAGCCAAAGCCTACCATGTAC...GTCTGTTTGAAGGATGTATTTGGCTGTCTTCTGGACAGGCCATTCTAATAACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371205.5
3UTR-3UTR CCA 90 bp CTGTTATTAGAATGGCCTGTCCAGAAGACAGCCAAATACATCCTTCAAACAGACAGCTGCACAAGACCATaGGAACCTATCTCTTGCATC +
Preference number: 2 (lower is better)
Translates to: LLLEWPVQKTAKYILQTDSCTRP*EPISCI
Trigger: GATGCAAGAGATAGGTTCCCATGGTCTTGTGCAGCT...GTCTGTTTGAAGGATGTATTTGGCTGTCTTCTGGACAGGCCATTCTAATAACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371205.5
3UTR-3UTR TCA 90 bp CTGCTCTGCCATGTAGTAGTTTGTGTGATCCTCATTTGTAAAATGGAAATACTAAGGGAAGGATGGCCTTaGACACTGCGATGGAGGAAA +
Preference number: 2 (lower is better)
Translates to: LLCHVVVCVILICKMEILREGWP*TLRWRK
Trigger: TTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCT...TAGTATTTCCATTTTACAAATGAGGATCACACAAACTACTACATGGCAGAGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
3UTR-3UTR TCA 90 bp GAAACATCACCAGTCAATCCTGCTCAACAGGTAACTCTTGCAGCAATCCTTAAGGGATCCTGCACATTCTaGTGTGTAAATTCCACGATA +
Preference number: 2 (lower is better)
Translates to: ETSPVNPAQQVTLAAILKGSCTF*CVNSTI
Trigger: TATCGTGGAATTTACACATCAGAATGTGCAGGATCC...CTTAAGGATTGCTGCAAGAGTTACCTGTTGAGCAGGATTGACTGGTGATGTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
3UTR-3UTR TCA 90 bp CCACCATTCCTGGTATCAGTCCAGGTAAAATATATTACAGCTCTTTACTGGAGCGAAGGCAACAAAACCTaGGGAATACAACCTAGGATC +
Preference number: 2 (lower is better)
Translates to: PPFLVSVQVKYITALYWSEGNKT*GIQPRI
Trigger: GATCCTAGGTTGTATTCCTCAGGTTTTGTTGCCTTC...GCTCCAGTAAAGAGCTGTAATATATTTTACCTGGACTGATACCAGGAATGGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371205.5
3UTR-3UTR TCA 90 bp CTGTTATTAGAATGGCCTGTCCAGAAGACAGCCAAATACATCCTTCAAACAGACTTTGGAACTGGGTGTTaGAATAATCTGGAGGGCTCA +
Preference number: 2 (lower is better)
Translates to: LLLEWPVQKTAKYILQTDFGTGC*NNLEGS
Trigger: TGAGCCCTCCAGATTATTTCAACACCCAGTTCCAAA...GTCTGTTTGAAGGATGTATTTGGCTGTCTTCTGGACAGGCCATTCTAATAACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371205.5
3UTR CAA 90 bp AGCTTCCATGTGATGTTGAGCCTGTGGGTGCAGAGATGTCAAGAATaGAGATTTGGGAACCTCTGCCTAGATTTCAGAATATATATGGAA +
Preference number: 2 (lower is better)
Translates to: SFHVMLSLWVQRCQE*RFGNLCLDFRIYME
Trigger: TTCCATATATATTCTGAAATCTAGGCAGAGGTTCCCAAATCTCAATTCTTGACATCTCTGCACCCACAGGCTCAACATCACATGGAAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371205.5
3UTR-3UTR TCA 90 bp ATGCCAGATGTGCTTCCATCCAAAGCACATGAACAGAATGATATTAAATTACAAAGGGAAGGATGGCCTTaGACACTGCGATGGAGGAAA +
Preference number: 2 (lower is better)
Translates to: MPDVLPSKAHEQNDIKLQREGWP*TLRWRK
Trigger: TTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCT...TTGTAATTTAATATCATTCTGTTCATGTGCTTTGGATGGAAGCACATCTGGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
3UTR-3UTR TCA 90 bp ACTTTTTCATCATCTCAGTCACCTTTTCCTGAGAGACTTTCTCTGATGTCAAGTGCAAGAAAATCCCATTaGAGGCACACTGGGAGTAAG +
Preference number: 2 (lower is better)
Translates to: TFSSSQSPFPERLSLMSSARKSH*RHTGSK
Trigger: CTTACTCCCAGTGTGCCTTCAATGGGATTTTCTTGC...ACTTGACATCAGAGAAAGTCTCTCAGGAAAAGGTGACTGAGATGATGAAAAAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000635076.1
ENST00000639992.1
3UTR-3UTR TCA 90 bp ACCAGAAAAGCAGTATTCACTCAGGTACTTCTCCTTTACTCCAGCGTAAGATGTACCTTGTTTTCTGACTaGATTTGCCCAGCAGATAGT +
Preference number: 2 (lower is better)
Translates to: TRKAVFTQVLLLYSSVRCTLFSD*ICPADS
Trigger: ACTATCTGCTGGGCAAATTCAGTCAGAAAACAAGGT...ACATCTTACGCTGGAGTAAAGGAGAAGTACCTGAGTGAATACTGCTTTTCTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635076.1
3UTR-3UTR CCA 90 bp CCACCATTCCTGGTATCAGTCCAGGTAAAATATATTACAGCTCTTTACTGGAGCTTGACATACCTGCTTTaGGTGGGATTGAGAACTGTA +
Preference number: 2 (lower is better)
Translates to: PPFLVSVQVKYITALYWSLTYLL*VGLRTV
Trigger: TACAGTTCTCAATCCCACCCAAAGCAGGTATGTCAA...GCTCCAGTAAAGAGCTGTAATATATTTTACCTGGACTGATACCAGGAATGGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371205.5
3UTR CAA 90 bp TTCCACTCTGTAGCATTTGGGTATCACCTAGGAATATGTGATTTATaGACATACCTGCTTTGGGTGGGATTGAGAACTGTATTGACTGCA +
Preference number: 2 (lower is better)
Translates to: FHSVAFGYHLGICDL*TYLLWVGLRTVLTA
Trigger: TGCAGTCAATACAGTTCTCAATCCCACCCAAAGCAGGTATGTCAATAAATCACATATTCCTAGGTGATACCCAAATGCTACAGAGTGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
3UTR-3UTR TCA 90 bp GACTTGCATGGACCCTGTAACCCCTTTGTTTTGGCCAATTTCTCTCATTTGGAATCACCTAGGAATATGTaGTTTATTGACATACCTGCT +
Preference number: 2 (lower is better)
Translates to: DLHGPCNPFVLANFSHLESPRNM*FIDIPA
Trigger: AGCAGGTATGTCAATAAATCACATATTCCTAGGTGA...TTCCAAATGAGAGAAATTGGCCAAAACAAAGGGGTTACAGGGTCCATGCAAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371205.5
3UTR-3UTR TCA 90 bp GACTTGCATGGACCCTGTAACCCCTTTGTTTTGGCCAATTTCTCTCATTTGGAACCACAAGAAAGAATTTaGACATGTCCCAATTCGAAT +
Preference number: 2 (lower is better)
Translates to: DLHGPCNPFVLANFSHLEPQERI*TCPNSN
Trigger: ATTCGAATTGGGACATGTTCAAATTCTTTCTTGTGG...TTCCAAATGAGAGAAATTGGCCAAAACAAAGGGGTTACAGGGTCCATGCAAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371205.5
3UTR-3UTR TCA 90 bp CCACCATTCCTGGTATCAGTCCAGGTAAAATATATTACAGCTCTTTACTGGAGCGATTTAGTTGCTTTCTaGAAACTCTCCTGTGTTACC +
Preference number: 2 (lower is better)
Translates to: PPFLVSVQVKYITALYWSDLVAF*KLSCVT
Trigger: GGTAACACAGGAGAGTTTTCAGAAAGCAACTAAATC...GCTCCAGTAAAGAGCTGTAATATATTTTACCTGGACTGATACCAGGAATGGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371205.5
3UTR-3UTR TCA 90 bp GACTTGCATGGACCCTGTAACCCCTTTGTTTTGGCCAATTTCTCTCATTTGGAACTAACAGTTGGAATTTaGATCAGAGCAACTATTGGT +
Preference number: 2 (lower is better)
Translates to: DLHGPCNPFVLANFSHLELTVGI*IRATIG
Trigger: ACCAATAGTTGCTCTGATTCAAATTCCAACTGTTAG...TTCCAAATGAGAGAAATTGGCCAAAACAAAGGGGTTACAGGGTCCATGCAAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371205.5
3UTR-3UTR TCA 90 bp CTGTTATTAGAATGGCCTGTCCAGAAGACAGCCAAATACATCCTTCAAACAGACTTGATACGCAAAGTGTaGTTCCTGGACAGATGTATT +
Preference number: 2 (lower is better)
Translates to: LLLEWPVQKTAKYILQTDLIRKV*FLDRCI
Trigger: AATACATCTGTCCAGGAATCACACTTTGCGTATCAA...GTCTGTTTGAAGGATGTATTTGGCTGTCTTCTGGACAGGCCATTCTAATAACAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371205.5
3UTR-3UTR CCA 90 bp CTATGGTTTCTGCCTACCCAGGATAGTCTTGTCTCTAGACAATGTATTGATGATTTGACATACCTGCTTTaGGTGGGATTGAGAACTGTA +
Preference number: 2 (lower is better)
Translates to: LWFLPTQDSLVSRQCIDDLTYLL*VGLRTV
Trigger: TACAGTTCTCAATCCCACCCAAAGCAGGTATGTCAA...ATCATCAATACATTGTCTAGAGACAAGACTATCCTGGGTAGGCAGAAACCATAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
3UTR-3UTR CCA 90 bp CTATGGTTTCTGCCTACCCAGGATAGTCTTGTCTCTAGACAATGTATTGATGATCCACTCTGTAGCATTTaGGTATCACCTAGGAATATG +
Preference number: 2 (lower is better)
Translates to: LWFLPTQDSLVSRQCIDDPLCSI*VSPRNM
Trigger: CATATTCCTAGGTGATACCCAAATGCTACAGAGTGG...ATCATCAATACATTGTCTAGAGACAAGACTATCCTGGGTAGGCAGAAACCATAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
3UTR-3UTR CCA 90 bp CTGTTATTAGAATGGCCTGTCCAGAAGACAGCCAAATACATCCTTCAAACAGACGGTGTTGAAATAATCTaGAGGGCTCAGAAGAAGATA +
Preference number: 2 (lower is better)
Translates to: LLLEWPVQKTAKYILQTDGVEII*RAQKKI
Trigger: TATCTTCTTCTGAGCCCTCCAGATTATTTCAACACC...GTCTGTTTGAAGGATGTATTTGGCTGTCTTCTGGACAGGCCATTCTAATAACAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371205.5
3UTR-3UTR CCA 90 bp AGGGGGTCTTGTAAAGGTCACTTACGTTCACTACCTTCTTATATCCAGGATGAATCGATAGTCTGGTTTTaGGGTACAAAAGTGACTTGT +
Preference number: 2 (lower is better)
Translates to: RGSCKGHLRSLPSYIQDESIVWF*GTKVTC
Trigger: ACAAGTCACTTTTGTACCCCAAAACCAGACTATCGA...TTCATCCTGGATATAAGAAGGTAGTGAACGTAAGTGACCTTTACAAGACCCCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000635076.1
ENST00000639992.1
3UTR-3UTR CCA 90 bp ACCAGAAAAGCAGTATTCACTCAGGTACTTCTCCTTTACTCCAGCGTAAGATGTTGGATTTCAAACTGCTaGAATGGAAGAGTCATCTCA +
Preference number: 2 (lower is better)
Translates to: TRKAVFTQVLLLYSSVRCWISNC*NGRVIS
Trigger: TGAGATGACTCTTCCATTCCAGCAGTTTGAAATCCA...ACATCTTACGCTGGAGTAAAGGAGAAGTACCTGAGTGAATACTGCTTTTCTGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635076.1
ENST00000639992.1
3UTR CAA 90 bp GAGCACATATATTTCCTTATAAAACTCTTTGGCTTTAGCACATATTaGCCTACTGTAGAAAATTCTCCTACCCACAGAGCAGGCTGGGAA +
Preference number: 2 (lower is better)
Translates to: EHIYFLIKLFGFSTY*PTVENSPTHRAGWE
Trigger: TTCCCAGCCTGCTCTGTGGGTAGGAGAATTTTCTACAGTAGGCAAATATGTGCTAAAGCCAAAGAGTTTTATAAGGAAATATATGTGCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
3UTR-3UTR CCA 90 bp AGTATAGGCAACTACCACAAGAAAGAATTTGAACATGTCCCAATTCGAATTTTGATGTTGTGTGACGGGTaGCAACACTTTCAGACTTGG +
Preference number: 2 (lower is better)
Translates to: SIGNYHKKEFEHVPIRILMLCDG*QHFQTW
Trigger: CCAAGTCTGAAAGTGTTGCCACCCGTCACACAACAT...CAAAATTCGAATTGGGACATGTTCAAATTCTTTCTTGTGGTAGTTGCCTATACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
3UTR-3UTR CCA 90 bp GAGGCAAAGGATATTGAATACCTCCAAAAGAAAGGCTTCAGTAAAAGCCAAGGATGGATTTCAAACTGCTaGAATGGAAGAGTCATCTCA +
Preference number: 2 (lower is better)
Translates to: EAKDIEYLQKKGFSKSQGWISNC*NGRVIS
Trigger: TGAGATGACTCTTCCATTCCAGCAGTTTGAAATCCA...TCCTTGGCTTTTACTGAAGCCTTTCTTTTGGAGGTATTCAATATCCTTTGCCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635076.1
ENST00000639992.1
3UTR-3UTR TCA 90 bp CTGCTCTGCCATGTAGTAGTTTGTGTGATCCTCATTTGTAAAATGGAAATACTATCATCGGCCACTATTTaGTGTCAATCTACTATGCTG +
Preference number: 2 (lower is better)
Translates to: LLCHVVVCVILICKMEILSSATI*CQSTML
Trigger: CAGCATAGTAGATTGACATCAAATAGTGGCCGATGA...TAGTATTTCCATTTTACAAATGAGGATCACACAAACTACTACATGGCAGAGCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
3UTR-3UTR GCA 90 bp CTGCTCTGCCATGTAGTAGTTTGTGTGATCCTCATTTGTAAAATGGAAATACTAAACAGACCAGCTTTCTaGCTCCCTTTCTATGAATAC +
Preference number: 2 (lower is better)
Translates to: LLCHVVVCVILICKMEILNRPAF*LPFYEY
Trigger: GTATTCATAGAAAGGGAGGCAGAAAGCTGGTCTGTT...TAGTATTTCCATTTTACAAATGAGGATCACACAAACTACTACATGGCAGAGCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
3UTR-3UTR GCA 90 bp ACTTTTTCATCATCTCAGTCACCTTTTCCTGAGAGACTTTCTCTGATGTCAAGTGAGAATTTCATTACTTaGAACCTGAATGTCCTTGGC +
Preference number: 2 (lower is better)
Translates to: TFSSSQSPFPERLSLMSSENFIT*NLNVLG
Trigger: GCCAAGGACATTCAGGTTGCAAGTAATGAAATTCTC...ACTTGACATCAGAGAAAGTCTCTCAGGAAAAGGTGACTGAGATGATGAAAAAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000635076.1
ENST00000639992.1
3UTR-3UTR CCA 90 bp CTGCTCTGCCATGTAGTAGTTTGTGTGATCCTCATTTGTAAAATGGAAATACTAAACACAAAAGATCTATaGTTTCTGCCTACCCAGGAT +
Preference number: 2 (lower is better)
Translates to: LLCHVVVCVILICKMEILNTKDL*FLPTQD
Trigger: ATCCTGGGTAGGCAGAAACCATAGATCTTTTGTGTT...TAGTATTTCCATTTTACAAATGAGGATCACACAAACTACTACATGGCAGAGCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
3UTR-3UTR CCA 90 bp ACTTTTTCATCATCTCAGTCACCTTTTCCTGAGAGACTTTCTCTGATGTCAAGTATTATTGGTTTCATATaGGACTATGCTGAACCACCT +
Preference number: 2 (lower is better)
Translates to: TFSSSQSPFPERLSLMSSIIGFI*DYAEPP
Trigger: AGGTGGTTCAGCATAGTCCCATATGAAACCAATAAT...ACTTGACATCAGAGAAAGTCTCTCAGGAAAAGGTGACTGAGATGATGAAAAAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635076.1
3UTR CAA 90 bp CATGTAGACTTCCATCTTCATGAGTACTCCAAGAAGATGGTTCAGTaGACTATTGCAAAGGTAAAAATCCAAGAGATACAGATACAGAAT +
Preference number: 2 (lower is better)
Translates to: HVDFHLHEYSKKMVQ*TIAKVKIQEIQIQN
Trigger: ATTCTGTATCTGTATCTCTTGGATTTTTACCTTTGCAATAGTCAACTGAACCATCTTCTTGGAGTACTCATGAAGATGGAAGTCTACATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371205.5
3UTR GCA 72 bp CAGCCTGAGAAAGCAGCCAGGAGGGAGGCTGTACTCTaGAAAGCCACAGGGGCGGAGCTGCACAAGACCATG +
Preference number: 3 (lower is better)
Translates to: QPEKAARREAVL*KATGAELHKTM
Trigger: CATGGTCTTGTGCAGCTCCGCCCCTGTGGCTTTGCAGAGTACAGCCTCCCTCCTGGCTGCTTTCTCAGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371205.5
3UTR GCA 72 bp GGGAGGCTGTACTCTGCAAAGCCACAGGGGCGGAGCTaGACAAGACCATGGGAACCTATCTCTTGCATCAGC +
Preference number: 3 (lower is better)
Translates to: GRLYSAKPQGRS*TRPWEPISCIS
Trigger: GCTGATGCAAGAGATAGGTTCCCATGGTCTTGTGCAGCTCCGCCCCTGTGGCTTTGCAGAGTACAGCCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371205.5
3UTR GCA 72 bp AAAAAGTGGTTTTGTGGGCTGGGCCCAGGGTCTCTGTaGTGTGTGCAGCCTAGGGACTTGGTGCCCTGTGTC +
Preference number: 3 (lower is better)
Translates to: KKWFCGLGPGSL*CVQPRDLVPCV
Trigger: GACACAGGGCACCAAGTCCCTAGGCTGCACACAGCACAGAGACCCTGGGCCCAGCCCACAAAACCACTTTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371205.5
3UTR CCA 72 bp TGGGCTGTGGCTTCAGAGGGTAGAGGCCCCAAGCATTaGCAGCTTCCATGTGATGTTGAGCCTGTGGGTGCA +
Preference number: 3 (lower is better)
Translates to: WAVASEGRGPKH*QLPCDVEPVGA
Trigger: TGCACCCACAGGCTCAACATCACATGGAAGCTGCCAATGCTTGGGGCCTCTACCCTCTGAAGCCACAGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371205.5
3UTR CCA 72 bp GCTCCAGCCATGGCTGAAAGGAGCCAACATAGAGCTTaGGCTGTGGCTTCAGAGGGTAGAGGCCCCAAGCAT +
Preference number: 3 (lower is better)
Translates to: APAMAERSQHRA*AVASEGRGPKH
Trigger: ATGCTTGGGGCCTCTACCCTCTGAAGCCACAGCCCAAGCTCTATGTTGGCTCCTTTCAGCCATGGCTGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371205.5
3UTR-3UTR CAA 90 bp CAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGGAAGGATGGCCTCGCTGCCCTGGATCTaGCCAATGAAATGGATGTGC +
Preference number: 3 (lower is better)
Translates to: QGSFTLVKTGPGRQGRMASLPWI*PMKWMC
Trigger: GCACATCCATTTCATTGGCAAGATCCAGGGCAGCGA...GGCCATCCTTCCCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635076.1
ENST00000639992.1
3UTR GCA 72 bp CCTCTTAAGCACTCCAGGCCTTCACTGAGTATGAGGTaGTGGTCTCCAAAGGCAGAGGGCAAGGCAAGGCAG +
Preference number: 3 (lower is better)
Translates to: PLKHSRPSLSMR*WSPKAEGKARQ
Trigger: CTGCCTTGCCTTGCCCTCTGCCTTTGGAGACCAGCACCTCATACTCAGTGAAGGCCTGGAGTGCTTAAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371205.5
3UTR CCA 72 bp TCCAGGCAAAAGTTTGCTGCAGGGGCAGAGCCCTCATaGGGAACCTCTCCTAGGGCAGTGTGGAAGGGAAAT +
Preference number: 3 (lower is better)
Translates to: SRQKFAAGAEPS*GTSPRAVWKGN
Trigger: ATTTCCCTTCCACACTGCCCTAGGAGAGGTTCCCCATGAGGGCTCTGCCCCTGCAGCAAACTTTTGCCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371205.5
3UTR-3UTR CAA 90 bp ATATATGGAAACACCTGGATGTCCAGGCAAAAGTTTGCTGCAGGGGCAGAGCCCCACACAGAGTCCCTGTaGGGGCACTGCCTAGTGGAG +
Preference number: 3 (lower is better)
Translates to: IYGNTWMSRQKFAAGAEPHTESL*GHCLVE
Trigger: CTCCACTAGGCAGTGCCCCAACAGGGACTCTGTGTG...GGGCTCTGCCCCTGCAGCAAACTTTTGCCTGGACATCCAGGTGTTTCCATATAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000371205.5
3UTR CCA 72 bp AAGCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTaGCAGACAGGGAAGGATGGCCTTGAACACTGCGAT +
Preference number: 3 (lower is better)
Translates to: KPRKLHTRQDWP*QTGKDGLEHCD
Trigger: ATCGCAGTGTTCAAGGCCATCCTTCCCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
3UTR-3UTR CAA 90 bp CCCATTGAAGGCACACTGGGAGTAAGGGCAGTAACTGGTGTTGAAGAGCTCCAGCAGGGAAGGATGGCCTaGAACACTGCGATGGAGGAA +
Preference number: 3 (lower is better)
Translates to: PIEGTLGVRAVTGVEELQQGRMA*NTAMEE
Trigger: TTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTG...CTGGAGCTCTTCAACACCAGTTACTGCCCTTACTCCCAGTGTGCCTTCAATGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635076.1
ENST00000639992.1
3UTR CCA 72 bp CAGAGGAGTGGAGTGGGATATGAGCCTGGAGAGAGCTaGCGGCCATGGATCATTGAAAGCCTTGAATGTCTG +
Preference number: 3 (lower is better)
Translates to: QRSGVGYEPGES*RPWIIESLECL
Trigger: CAGACATTCAAGGCTTTCAATGATCCATGGCCGCCAGCTCTCTCCAGGCTCATATCCCACTCCACTCCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371205.5
3UTR-3UTR CAA 90 bp TGGGAGCCCGAGGCAATAGGATCACCTGAGATTGGGAGTTGGAGACCAGCCTGGGCAACACTTTCAGACTaGGATCCTGCACATTCTGAT +
Preference number: 3 (lower is better)
Translates to: WEPEAIGSPEIGSWRPAWATLSD*DPAHSD
Trigger: ATCAGAATGTGCAGGATCCAAGTCTGAAAGTGTTGC...CCAGGCTGGTCTCCAACTCCCAATCTCAGGTGATCCTATTGCCTCGGGCTCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
3UTR-3UTR CAA 90 bp TGGGAGCCCGAGGCAATAGGATCACCTGAGATTGGGAGTTGGAGACCAGCCTGGATAATTGGGGTTAGGTaGTGTCTGCTGATTGTCTCC +
Preference number: 3 (lower is better)
Translates to: WEPEAIGSPEIGSWRPAWIIGVR*CLLIVS
Trigger: GGAGACAATCAGCAGACACAACCTAACCCCAATTAT...CCAGGCTGGTCTCCAACTCCCAATCTCAGGTGATCCTATTGCCTCGGGCTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
3UTR TCA 72 bp TGTGCCTGGAAAAGCTACAGACACTCAACATCAGCCTaGGAAAGCAGCCAGGAGGGAGGCTGTACTCTGCAA +
Preference number: 3 (lower is better)
Translates to: CAWKSYRHSTSA*ESSQEGGCTLQ
Trigger: TTGCAGAGTACAGCCTCCCTCCTGGCTGCTTTCTCAGGCTGATGTTGAGTGTCTGTAGCTTTTCCAGGCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371205.5
3UTR-3UTR CAA 90 bp GGGTGCAGGGTCTCTTCATGTTTCCATGGTAAGGTCTATAGCTGCTGCTTCATGCAGGGAAGGATGGCCTaGAACACTGCGATGGAGGAA +
Preference number: 3 (lower is better)
Translates to: GCRVSSCFHGKVYSCCFMQGRMA*NTAMEE
Trigger: TTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTG...CATGAAGCAGCAGCTATAGACCTTACCATGGAAACATGAAGAGACCCTGCACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
3UTR-3UTR CAA 90 bp TGGGAGCCCGAGGCAATAGGATCACCTGAGATTGGGAGTTGGAGACCAGCCTGGTATCTGCCGAAGTCCTaGAGGCAAAGGATATTGAAT +
Preference number: 3 (lower is better)
Translates to: WEPEAIGSPEIGSWRPAWYLPKS*RQRILN
Trigger: ATTCAATATCCTTTGCCTCAAGGACTTCGGCAGATA...CCAGGCTGGTCTCCAACTCCCAATCTCAGGTGATCCTATTGCCTCGGGCTCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
3UTR-3UTR CAA 90 bp CTTGAGCACACAGCGTGGTACACCACAAATGCTCAACCAACAGCAGCGATGACAAGAGATAGGGGACATTaGGCTTCCGGTTTGTGTGAG +
Preference number: 3 (lower is better)
Translates to: LEHTAWYTTNAQPTAAMTRDRGH*ASGLCE
Trigger: CTCACACAAACCGGAAGCCAAATGTCCCCTATCTCT...TGTCATCGCTGCTGTTGGTTGAGCATTTGTGGTGTACCACGCTGTGTGCTCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
3UTR-3UTR CAA 90 bp AACCTGAATGTCCTTGGCCAGTTTCTGCCAGAGTGCCTGATCCTTCCCATAGCAGCCATAGAGGCGAAATaGCAGAGCATTATCTGGGGA +
Preference number: 3 (lower is better)
Translates to: NLNVLGQFLPECLILPIAAIEAK*QSIIWG
Trigger: TCCCCAGATAATGCTCTGCAATTTCGCCTCTATGGC...TGCTATGGGAAGGATCAGGCACTCTGGCAGAAACTGGCCAAGGACATTCAGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000483213.6
ENST00000635076.1
ENST00000639992.1
3UTR TCA 72 bp CCCACATGTTGTGGGAGGGACGCAGTGGGAGGTAATTaGATCATGGAGGCCAGTCTTTTCTGTGCTATTCTC +
Preference number: 3 (lower is better)
Translates to: PTCCGRDAVGGN*IMEASLFCAIL
Trigger: GAGAATAGCACAGAAAAGACTGGCCTCCATGATTCAATTACCTCCCACTGCGTCCCTCCCACAACATGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371205.5
3UTR TCA 72 bp CTTCCAGAATTCCCACAGGACCCAGGGGGAGGTAATTaGATCAAGGGGGCTGGTCTTTCCCATGCTATTCTT +
Preference number: 3 (lower is better)
Translates to: LPEFPQDPGGGN*IKGAGLSHAIL
Trigger: AAGAATAGCATGGGAAAGACCAGCCCCCTTGATTCAATTACCTCCCCCTGGGTCCTGTGGGAATTCTGGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000371205.5
3UTR TCA 72 bp AATAGAGCTGCTGTGGTTCTGGTTCTCCCTGCAGGATaGAGGGGGCCTGCAAAATGTCTCCTACTTCCATTC +
Preference number: 3 (lower is better)
Translates to: NRAAVVLVLPAG*RGPAKCLLLPF
Trigger: GAATGGAAGTAGGAGACATTTTGCAGGCCCCCTTCATCCTGCAGGGAGAACCAGAACCACAGCAGCTCTATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371205.5
3UTR CCA 72 bp CTCCCAGAATTCCCACATGTTGTGGGAGGGACGCAGTaGGAGGTAATTGAATCATGGAGGCCAGTCTTTTCT +
Preference number: 3 (lower is better)
Translates to: LPEFPHVVGGTQ*EVIESWRPVFS
Trigger: AGAAAAGACTGGCCTCCATGATTCAATTACCTCCCACTGCGTCCCTCCCACAACATGTGGGAATTCTGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371205.5
3UTR-3UTR CAA 90 bp CCCATTGAAGGCACACTGGGAGTAAGGGCAGTAACTGGTGTTGAAGAGCTCCAGCTCGATAGTCTGGTTTaGGGGTACAAAAGTGACTTG +
Preference number: 3 (lower is better)
Translates to: PIEGTLGVRAVTGVEELQLDSLV*GYKSDL
Trigger: CAAGTCACTTTTGTACCCCAAAACCAGACTATCGAG...CTGGAGCTCTTCAACACCAGTTACTGCCCTTACTCCCAGTGTGCCTTCAATGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635076.1
ENST00000639992.1
3UTR-3UTR CAA 90 bp AATGTCCTTGGCCAGTTTCTGCCAGAGTGCCTGATCCTTCCCATAGCACAAGAAGCCATAGAGGCGAAATaGCAGAGCATTATCTGGGGA +
Preference number: 3 (lower is better)
Translates to: NVLGQFLPECLILPIAQEAIEAK*QSIIWG
Trigger: TCCCCAGATAATGCTCTGCAATTTCGCCTCTATGGC...TTCTTGTGCTATGGGAAGGATCAGGCACTCTGGCAGAAACTGGCCAAGGACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000483213.6
ENST00000635076.1
ENST00000639992.1
3UTR CCA 72 bp CCTACTGTAGAAAATTCTCCTACCCACAGAGCAGGCTaGGAATGGAATGTGTGTCTGCCTTCTCCAAAGGCA +
Preference number: 3 (lower is better)
Translates to: PTVENSPTHRAG*EWNVCLPSPKA
Trigger: TGCCTTTGGAGAAGGCAGACACACATTCCATTCCCAGCCTGCTCTGTGGGTAGGAGAATTTTCTACAGTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
3UTR-3UTR CAA 90 bp GTATCTGCCGAAGTCCTTGAGGCAAAGGATATTGAATACCTCCAAAAGAAAGGCCAGGGAAGGATGGCCTaGAACACTGCGATGGAGGAA +
Preference number: 3 (lower is better)
Translates to: VSAEVLEAKDIEYLQKKGQGRMA*NTAMEE
Trigger: TTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTG...GCCTTTCTTTTGGAGGTATTCAATATCCTTTGCCTCAAGGACTTCGGCAGATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000635076.1
ENST00000639992.1
3UTR GCA 72 bp CCCAGAATGGTAGATCAACCACCAACTTGCATCTTGTaGCTGGAAAAGCTACAGACACTCAACATCAGCCTG +
Preference number: 3 (lower is better)
Translates to: PRMVDQPPTCIL*LEKLQTLNISL
Trigger: CAGGCTGATGTTGAGTGTCTGTAGCTTTTCCAGGCACAAGATGCAAGTTGGTGGTTGATCTACCATTCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371205.5
3UTR CCA 72 bp CCAAGCATTGGCAGCTTCCATGTGATGTTGAGCCTGTaGGTGCAGAGATGTCAAGAATTGAGATTTGGGAAC +
Preference number: 3 (lower is better)
Translates to: PSIGSFHVMLSL*VQRCQELRFGN
Trigger: GTTCCCAAATCTCAATTCTTGACATCTCTGCACCCACAGGCTCAACATCACATGGAAGCTGCCAATGCTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371205.5
3UTR CCA 72 bp TTAAAGAGGAATAGGCAAATAGAGCTGCTGTGGTTCTaGTTCTCCCTGCAGGATGAAGGGGGCCTGCAAAAT +
Preference number: 3 (lower is better)
Translates to: LKRNRQIELLWF*FSLQDEGGLQN
Trigger: ATTTTGCAGGCCCCCTTCATCCTGCAGGGAGAACCAGAACCACAGCAGCTCTATTTGCCTATTCCTCTTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371205.5
3UTR-3UTR CAA 90 bp GTATCTGCCGAAGTCCTTGAGGCAAAGGATATTGAATACCTCCAAAAGAAAGGCTCGCTGCCCTGGATCTaGCCAATGAAATGGATGTGC +
Preference number: 3 (lower is better)
Translates to: VSAEVLEAKDIEYLQKKGSLPWI*PMKWMC
Trigger: GCACATCCATTTCATTGGCAAGATCCAGGGCAGCGA...GCCTTTCTTTTGGAGGTATTCAATATCCTTTGCCTCAAGGACTTCGGCAGATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635076.1
ENST00000639992.1
3UTR TCA 72 bp GGTGGCAACACTTTCAGACTTGGATCCTGCACATTCTaGTGTGTAAATTCCACGATAGGGCAAAAGCATGCC +
Preference number: 3 (lower is better)
Translates to: GGNTFRLGSCTF*CVNSTIGQKHA
Trigger: GGCATGCTTTTGCCCTATCGTGGAATTTACACATCAGAATGTGCAGGATCCAAGTCTGAAAGTGTTGCCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
3UTR TCA 72 bp GCACAAGACCATGGGAACCTATCTCTTGCATCAGCATaGCCTGAATGTGAGACATGGAGTCAAAGGAGATCA +
Preference number: 3 (lower is better)
Translates to: AQDHGNLSLASA*PECETWSQRRS
Trigger: TGATCTCCTTTGACTCCATGTCTCACATTCAGGTCATGCTGATGCAAGAGATAGGTTCCCATGGTCTTGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371205.5
3UTR GCA 72 bp AAGCCAGGGGTATGGGAACCACTGATTAGCATCATATaGCAGATGTGCTTCCATCCAAAGCACATGAACAGA +
Preference number: 3 (lower is better)
Translates to: KPGVWEPLISII*QMCFHPKHMNR
Trigger: TCTGTTCATGTGCTTTGGATGGAAGCACATCTGGCATATGATGCTAATCAGTGGTTCCCATACCCCTGGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
3UTR CCA 72 bp TGGAATAAGCAAACAAAGCCCATGTTGTGTGACGGGTaGCAACACTTTCAGACTTGGATCCTGCACATTCTG +
Preference number: 3 (lower is better)
Translates to: WNKQTKPMLCDG*QHFQTWILHIL
Trigger: CAGAATGTGCAGGATCCAAGTCTGAAAGTGTTGCCACCCGTCACACAACATGGGCTTTGTTTGCTTATTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
3UTR CCA 72 bp CCTCTGCCTAGATTTCAGAATATATATGGAAACACCTaGATGTCCAGGCAAAAGTTTGCTGCAGGGGCAGAG +
Preference number: 3 (lower is better)
Translates to: PLPRFQNIYGNT*MSRQKFAAGAE
Trigger: CTCTGCCCCTGCAGCAAACTTTTGCCTGGACATCCAGGTGTTTCCATATATATTCTGAAATCTAGGCAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371205.5
3UTR-3UTR CAA 90 bp CTTGAGCACACAGCGTGGTACACCACAAATGCTCAACCAACAGCAGCGATGACATCTCTAGACAATGTATaGATGATGCAAATGTTCTGG +
Preference number: 3 (lower is better)
Translates to: LEHTAWYTTNAQPTAAMTSLDNV*MMQMFW
Trigger: CCAGAACATTTGCATCATCAATACATTGTCTAGAGA...TGTCATCGCTGCTGTTGGTTGAGCATTTGTGGTGTACCACGCTGTGTGCTCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
3UTR-3UTR CAA 90 bp TGTAGACATTGTAGTCCTTGCCATAGAGGCGAAATTGCAGAGCATTATCTGGGGCTCGATAGTCTGGTTTaGGGGTACAAAAGTGACTTG +
Preference number: 3 (lower is better)
Translates to: CRHCSPCHRGEIAEHYLGLDSLV*GYKSDL
Trigger: CAAGTCACTTTTGTACCCCAAAACCAGACTATCGAG...CCCCAGATAATGCTCTGCAATTTCGCCTCTATGGCAAGGACTACAATGTCTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000483213.6
ENST00000635076.1
ENST00000639992.1
3UTR-3UTR CAA 90 bp GGAATGGAAGAGTCATCTCAAATCTCTTGGTGCAGGGGGTCTTGTAAAGGTCACGCTTTGATGGCATTGTaGATAGTTTCCAATACCCTG +
Preference number: 3 (lower is better)
Translates to: GMEESSQISWCRGSCKGHALMAL*IVSNTL
Trigger: CAGGGTATTGGAAACTATCAACAATGCCATCAAAGC...GTGACCTTTACAAGACCCCCTGCACCAAGAGATTTGAGATGACTCTTCCATTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635076.1
ENST00000639992.1
3UTR TCA 72 bp AGATCTAGAGATGGAGAGCTTGGGACAAGGTCAGAATaGAACATCACCAGTCAATCCTGCTCAACAGGTAAC +
Preference number: 3 (lower is better)
Translates to: RSRDGELGTRSE*NITSQSCSTGN
Trigger: GTTACCTGTTGAGCAGGATTGACTGGTGATGTTTCATTCTGACCTTGTCCCAAGCTCTCCATCTCTAGATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
3UTR TCA 72 bp AGTTGCTTTCTGAAAACTCTCCTGTGTTACCCAGTTTaGGTGTACCATACCATCCATCTCTTGCAGGGACCT +
Preference number: 3 (lower is better)
Translates to: SCFLKTLLCYPV*VYHTIHLLQGP
Trigger: AGGTCCCTGCAAGAGATGGATGGTATGGTACACTCAAACTGGGTAACACAGGAGAGTTTTCAGAAAGCAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371205.5
3UTR TCA 72 bp AAACTTTCCCAAGGTCTCTTGTCATGCATCTTGGACTaGATAACAGGCATCCCTGCCTTCACATCTTCATGG +
Preference number: 3 (lower is better)
Translates to: KLSQGLLSCILD*ITGIPAFTSSW
Trigger: CCATGAAGATGTGAAGGCAGGGATGCCTGTTATTCAGTCCAAGATGCATGACAAGAGACCTTGGGAAAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371205.5
3UTR GCA 72 bp ACTGCTGGAATGGAAGAGTCATCTCAAATCTCTTGGTaGAGGGGGTCTTGTAAAGGTCACTTACGTTCACTA +
Preference number: 3 (lower is better)
Translates to: TAGMEESSQISW*RGSCKGHLRSL
Trigger: TAGTGAACGTAAGTGACCTTTACAAGACCCCCTGCACCAAGAGATTTGAGATGACTCTTCCATTCCAGCAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635076.1
ENST00000639992.1
3UTR CCA 72 bp CATGTTTCCATGGTAAGGTCTATAGCTGCTGCTTCATaGAATAAGCAAACAAAGCCCATGTTGTGTGACGGG +
Preference number: 3 (lower is better)
Translates to: HVSMVRSIAAAS*NKQTKPMLCDG
Trigger: CCCGTCACACAACATGGGCTTTGTTTGCTTATTCCATGAAGCAGCAGCTATAGACCTTACCATGGAAACATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
3UTR CCA 72 bp CCTAGAAACCACTGGACAAGGAGAACAAGAGGTATATaGAATAGGTCTGATCCACCCTTACCACCTGAAGTA +
Preference number: 3 (lower is better)
Translates to: PRNHWTRRTRGI*NRSDPPLPPEV
Trigger: TACTTCAGGTGGTAAGGGTGGATCAGACCTATTCCATATACCTCTTGTTCTCCTTGTCCAGTGGTTTCTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371205.5
3UTR CCA 72 bp AGGGTTGTGGTAGCACAAGGAAGAGACATTCTGACTTaGAAATTTGGAGAAGGCTTCACAAATGAAGGGGCA +
Preference number: 3 (lower is better)
Translates to: RVVVAQGRDILT*KFGEGFTNEGA
Trigger: TGCCCCTTCATTTGTGAAGCCTTCTCCAAATTTCCAAGTCAGAATGTCTCTTCCTTGTGCTACCACAACCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371205.5
3UTR CCA 72 bp CAAACTGCTGGAATGGAAGAGTCATCTCAAATCTCTTaGTGCAGGGGGTCTTGTAAAGGTCACTTACGTTCA +
Preference number: 3 (lower is better)
Translates to: QTAGMEESSQIS*CRGSCKGHLRS
Trigger: TGAACGTAAGTGACCTTTACAAGACCCCCTGCACCAAGAGATTTGAGATGACTCTTCCATTCCAGCAGTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635076.1
ENST00000639992.1
3UTR-3UTR CAA 90 bp GAAACATCACCAGTCAATCCTGCTCAACAGGTAACTCTTGCAGCAATCCTTAAGATTGACATACCTGCTTaGGGTGGGATTGAGAACTGT +
Preference number: 3 (lower is better)
Translates to: ETSPVNPAQQVTLAAILKIDIPA*GGIENC
Trigger: ACAGTTCTCAATCCCACCCAAAGCAGGTATGTCAAT...CTTAAGGATTGCTGCAAGAGTTACCTGTTGAGCAGGATTGACTGGTGATGTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
3UTR TCA 72 bp GGCATAACCTACCTACTCTTTCCTATGGGCCTCTACTaGGAGCATGGAGGTAATACATCTAATACACTGAAG +
Preference number: 3 (lower is better)
Translates to: GITYLLFPMGLY*EHGGNTSNTLK
Trigger: CTTCAGTGTATTAGATGTATTACCTCCATGCTCTCAGTAGAGGCCCATAGGAAAGAGTAGGTAGGTTATGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371205.5
3UTR GCA 72 bp TATGTTTTAGCAAGGAGACTGGCAGCATTTCACCCTTaGCCTAGAGATTTGTGGAACTTAGAGCTTGAGAGA +
Preference number: 3 (lower is better)
Translates to: YVLARRLAAFHP*PRDLWNLELER
Trigger: TCTCTCAAGCTCTAAGTTCCACAAATCTCTAGGGCAAGGGTGAAATGCTGCCAGTCTCCTTGCTAAAACATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371205.5
3UTR CCA 72 bp ACTTCCATTCTAGTCATTCAGCAAGGTGCCTTCCTCTaGATGCACTGTCTGTATACTTTTGCCATGTTGCAT +
Preference number: 3 (lower is better)
Translates to: TSILVIQQGAFL*MHCLYTFAMLH
Trigger: ATGCAACATGGCAAAAGTATACAGACAGTGCATCCAGAGGAAGGCACCTTGCTGAATGACTAGAATGGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371205.5
3UTR TCA 72 bp CCACTCTGTAGCATTTGGGTATCACCTAGGAATATGTaGTTTATTGACATACCTGCTTTGGGTGGGATTGAG +
Preference number: 3 (lower is better)
Translates to: PLCSIWVSPRNM*FIDIPALGGIE
Trigger: CTCAATCCCACCCAAAGCAGGTATGTCAATAAATCACATATTCCTAGGTGATACCCAAATGCTACAGAGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
3UTR TCA 72 bp ACATTAAAATTAGGAAGCCAGGGGTATGGGAACCACTaGTTAGCATCATATGCCAGATGTGCTTCCATCCAA +
Preference number: 3 (lower is better)
Translates to: TLKLGSQGYGNH*LASYARCASIQ
Trigger: TTGGATGGAAGCACATCTGGCATATGATGCTAATCAGTGGTTCCCATACCCCTGGCTTCCTAATTTTAATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
3UTR TCA 72 bp ACCCGAAAATGTGGAAGCAACTTTGGAACTGGGTGTTaGAATAATCTGGAGGGCTCAGAAGAAGATAGGAAA +
Preference number: 3 (lower is better)
Translates to: TRKCGSNFGTGC*NNLEGSEEDRK
Trigger: TTTCCTATCTTCTTCTGAGCCCTCCAGATTATTTCAACACCCAGTTCCAAAGTTGCTTCCACATTTTCGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371205.5
3UTR TCA 72 bp CTACCTTCTTATATCCAGGATGAAAGCATGGGTCCCTaGGAATTTCATTACTTGCAACCTGAATGTCCTTGG +
Preference number: 3 (lower is better)
Translates to: LPSYIQDESMGP*EFHYLQPECPW
Trigger: CCAAGGACATTCAGGTTGCAAGTAATGAAATTCTCAGGGACCCATGCTTTCATCCTGGATATAAGAAGGTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000483213.6
ENST00000635076.1
ENST00000639992.1
3UTR GCA 72 bp GTCAAAGGAGATCATTATGGAGCTTTAAAATTTGACTaGCCCACTGGATTTCAGACTTGCATGGACCCTGTA +
Preference number: 3 (lower is better)
Translates to: VKGDHYGALKFD*PTGFQTCMDPV
Trigger: TACAGGGTCCATGCAAGTCTGAAATCCAGTGGGGCAGTCAAATTTTAAAGCTCCATAATGATCTCCTTTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371205.5
3UTR CCA 72 bp GGAATAAAAGCTTCATCAGGGAACCAGGAGTTGGGCTaGTTCTTAAAACCTGGAGAAAGAAGATGGTTACAT +
Preference number: 3 (lower is better)
Translates to: GIKASSGNQELG*FLKPGERRWLH
Trigger: ATGTAACCATCTTCTTTCTCCAGGTTTTAAGAACCAGCCCAACTCCTGGTTCCCTGATGAAGCTTTTATTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371205.5
3UTR CCA 72 bp GAGCCTGTGGGTGCAGAGATGTCAAGAATTGAGATTTaGGAACCTCTGCCTAGATTTCAGAATATATATGGA +
Preference number: 3 (lower is better)
Translates to: EPVGAEMSRIEI*EPLPRFQNIYG
Trigger: TCCATATATATTCTGAAATCTAGGCAGAGGTTCCCAAATCTCAATTCTTGACATCTCTGCACCCACAGGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371205.5
3UTR-3UTR CAA 90 bp ATCCTGCACATTCTGATGTGTAAATTCCACGATAGGGCAAAAGCATGCCACTCCGGCTTTAGCACATATTaGCCTACTGTAGAAAATTCT +
Preference number: 3 (lower is better)
Translates to: ILHILMCKFHDRAKACHSGFSTY*PTVENS
Trigger: AGAATTTTCTACAGTAGGCAAATATGTGCTAAAGCC...GGAGTGGCATGCTTTTGCCCTATCGTGGAATTTACACATCAGAATGTGCAGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
3UTR-3UTR CAA 90 bp AGTATAGGCAACTACCACAAGAAAGAATTTGAACATGTCCCAATTCGAATTTTGCAAACAAAGCCCATGTaGTGTGACGGGTGGCAACAC +
Preference number: 3 (lower is better)
Translates to: SIGNYHKKEFEHVPIRILQTKPM*CDGWQH
Trigger: GTGTTGCCACCCGTCACACAACATGGGCTTTGTTTG...CAAAATTCGAATTGGGACATGTTCAAATTCTTTCTTGTGGTAGTTGCCTATACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
3UTR-3UTR CAA 90 bp CTTTGTTTTGGCCAATTTCTCTCATTTGGAACAGCTGTATTTACCCAATACCTGTCTAGCAGCAACAGATaGGAAGCAACACCACCATTC +
Preference number: 3 (lower is better)
Translates to: LCFGQFLSFGTAVFTQYLSSSNR*EATPPF
Trigger: GAATGGTGGTGTTGCTTCCAATCTGTTGCTGCTAGA...CAGGTATTGGGTAAATACAGCTGTTCCAAATGAGAGAAATTGGCCAAAACAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371205.5
3UTR TCA 72 bp ATGATAATGTCATCTAGACCTTTGATACGCAAAGTGTaGTTCCTGGACAGATGTATTGGCTTTACCTGGCAG +
Preference number: 3 (lower is better)
Translates to: MIMSSRPLIRKV*FLDRCIGFTWQ
Trigger: CTGCCAGGTAAAGCCAATACATCTGTCCAGGAATCACACTTTGCGTATCAAAGGTCTAGATGACATTATCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371205.5
3UTR TCA 72 bp AAATGGACTAATAGTACCAGTAGAGTGGGGCATTGCTaGAAAGATACCCGAAAATGTGGAAGCAACTTTGGA +
Preference number: 3 (lower is better)
Translates to: KWTNSTSRVGHC*KDTRKCGSNFG
Trigger: TCCAAAGTTGCTTCCACATTTTCGGGTATCTTTTCAGCAATGCCCCACTCTACTGGTACTATTAGTCCATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371205.5
3UTR GCA 72 bp GCTTCAACCAGAAGACATGAGTTGGAGTATCTGCTCTaGCATGTAGTAGTTTGTGTGATCCTCATTTGTAAA +
Preference number: 3 (lower is better)
Translates to: ASTRRHELEYLL*HVVVCVILICK
Trigger: TTTACAAATGAGGATCACACAAACTACTACATGGCAGAGCAGATACTCCAACTCATGTCTTCTGGTTGAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
3UTR CCA 72 bp TGTTCTAACAGTTGGAATTTGAATCAGAGCAACTATTaGTATTTGAATCAGAGAGGGGCCAGACCAGTTTGG +
Preference number: 3 (lower is better)
Translates to: CSNSWNLNQSNY*YLNQRGARPVW
Trigger: CCAAACTGGTCTGGCCCCTCTCTGATTCAAATACCAATAGTTGCTCTGATTCAAATTCCAACTGTTAGAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371205.5
3UTR CCA 72 bp TTTCAGACTTGCATGGACCCTGTAACCCCTTTGTTTTaGCCAATTTCTCTCATTTGGAACAGCTGTATTTAC +
Preference number: 3 (lower is better)
Translates to: FQTCMDPVTPLF*PISLIWNSCIY
Trigger: GTAAATACAGCTGTTCCAAATGAGAGAAATTGGCCAAAACAAAGGGGTTACAGGGTCCATGCAAGTCTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371205.5
3UTR-3UTR CAA 90 bp CCACCATTCCTGGTATCAGTCCAGGTAAAATATATTACAGCTCTTTACTGGAGCACCACAAGAAAGAATTaGAACATGTCCCAATTCGAA +
Preference number: 3 (lower is better)
Translates to: PPFLVSVQVKYITALYWSTTRKN*NMSQFE
Trigger: TTCGAATTGGGACATGTTCAAATTCTTTCTTGTGGT...GCTCCAGTAAAGAGCTGTAATATATTTTACCTGGACTGATACCAGGAATGGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371205.5
3UTR-3UTR CAA 90 bp CTTTGTTTTGGCCAATTTCTCTCATTTGGAACAGCTGTATTTACCCAATACCTGGTTTTAAGTGCATGCTaGGAAGTTATGAGGAGACAG +
Preference number: 3 (lower is better)
Translates to: LCFGQFLSFGTAVFTQYLVLSAC*EVMRRQ
Trigger: CTGTCTCCTCATAACTTCCAAGCATGCACTTAAAAC...CAGGTATTGGGTAAATACAGCTGTTCCAAATGAGAGAAATTGGCCAAAACAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371205.5
3UTR-3UTR CAA 90 bp CTTTGTTTTGGCCAATTTCTCTCATTTGGAACAGCTGTATTTACCCAATACCTGTGTCTGATGGGGAGGTaGACTTTATTTTGTAGGCAA +
Preference number: 3 (lower is better)
Translates to: LCFGQFLSFGTAVFTQYLCLMGR*TLFCRQ
Trigger: TTGCCTACAAAATAAAGTCAACCTCCCCATCAGACA...CAGGTATTGGGTAAATACAGCTGTTCCAAATGAGAGAAATTGGCCAAAACAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371205.5
3UTR-3UTR CAA 90 bp CTGTTATTAGAATGGCCTGTCCAGAAGACAGCCAAATACATCCTTCAAACAGACCATTCAAAAGGTGACTaGGGTGCTGTTAAAAACATT +
Preference number: 3 (lower is better)
Translates to: LLLEWPVQKTAKYILQTDHSKGD*GAVKNI
Trigger: AATGTTTTTAACAGCACCCAAGTCACCTTTTGAATG...GTCTGTTTGAAGGATGTATTTGGCTGTCTTCTGGACAGGCCATTCTAATAACAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371205.5
3UTR GCA 72 bp GTATGGGAACCACTGATTAGCATCATATGCCAGATGTaGTTCCATCCAAAGCACATGAACAGAATGATATTA +
Preference number: 3 (lower is better)
Translates to: VWEPLISIICQM*FHPKHMNRMIL
Trigger: TAATATCATTCTGTTCATGTGCTTTGGATGGAAGCACATCTGGCATATGATGCTAATCAGTGGTTCCCATAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
3UTR GCA 72 bp GTGCAGAGATGTCAAGAATTGAGATTTGGGAACCTCTaGCTAGATTTCAGAATATATATGGAAACACCTGGA +
Preference number: 3 (lower is better)
Translates to: VQRCQELRFGNL*LDFRIYMETPG
Trigger: TCCAGGTGTTTCCATATATATTCTGAAATCTAGGCAGAGGTTCCCAAATCTCAATTCTTGACATCTCTGCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371205.5
3UTR CCA 72 bp CTGTGCTATTCTCGTGATAATAAGTCCCACAAGATCTaGTGGGTTTATGAAGAGTTTCTGCTTTTGCTTCTT +
Preference number: 3 (lower is better)
Translates to: LCYSRDNKSHKI*WVYEEFLLLLL
Trigger: AAGAAGCAAAAGCAGAAACTCTTCATAAACCCACCAGATCTTGTGGGACTTATTATCACGAGAATAGCACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371205.5
3UTR-3UTR CAA 90 bp GAGGCAAAGGATATTGAATACCTCCAAAAGAAAGGCTTCAGTAAAAGCCAAGGAATCTTTATGGTACAGTaGGTTTCCATAGCTGTAAAC +
Preference number: 3 (lower is better)
Translates to: EAKDIEYLQKKGFSKSQGIFMVQ*VSIAVN
Trigger: GTTTACAGCTATGGAAACCAACTGTACCATAAAGAT...TCCTTGGCTTTTACTGAAGCCTTTCTTTTGGAGGTATTCAATATCCTTTGCCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
3UTR-3UTR CAA 90 bp ATGCCAGATGTGCTTCCATCCAAAGCACATGAACAGAATGATATTAAATTACAAGCAACACTTTCAGACTaGGATCCTGCACATTCTGAT +
Preference number: 3 (lower is better)
Translates to: MPDVLPSKAHEQNDIKLQATLSD*DPAHSD
Trigger: ATCAGAATGTGCAGGATCCAAGTCTGAAAGTGTTGC...TTGTAATTTAATATCATTCTGTTCATGTGCTTTGGATGGAAGCACATCTGGCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
3UTR TCA 72 bp CTGCTTTGGGTGGGATTGAGAACTGTATTGACTGCATaGGCACATATATTTCCTTATAAAACTCTTTGGCTT +
Preference number: 3 (lower is better)
Translates to: LLWVGLRTVLTA*AHIFPYKTLWL
Trigger: AAGCCAAAGAGTTTTATAAGGAAATATATGTGCTCATGCAGTCAATACAGTTCTCAATCCCACCCAAAGCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
3UTR-3UTR CAA 90 bp AGTATAGGCAACTACCACAAGAAAGAATTTGAACATGTCCCAATTCGAATTTTGTATCTGCCGAAGTCCTaGAGGCAAAGGATATTGAAT +
Preference number: 3 (lower is better)
Translates to: SIGNYHKKEFEHVPIRILYLPKS*RQRILN
Trigger: ATTCAATATCCTTTGCCTCAAGGACTTCGGCAGATA...CAAAATTCGAATTGGGACATGTTCAAATTCTTTCTTGTGGTAGTTGCCTATACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
3UTR-3UTR CAA 90 bp CTGCTCTGCCATGTAGTAGTTTGTGTGATCCTCATTTGTAAAATGGAAATACTAGGAATATGTGATTTATaGACATACCTGCTTTGGGTG +
Preference number: 3 (lower is better)
Translates to: LLCHVVVCVILICKMEILGICDL*TYLLWV
Trigger: CACCCAAAGCAGGTATGTCAATAAATCACATATTCC...TAGTATTTCCATTTTACAAATGAGGATCACACAAACTACTACATGGCAGAGCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
3UTR CAA 72 bp GGCCCAGGGTCTCTGTGCTGTGTGCAGCCTAGGGACTaGGTGCCCTGTGTCCCAGCTGCTCCAGCCATGGCT +
Preference number: 4 (lower is better)
Translates to: GPGSLCCVQPRD*VPCVPAAPAMA
Trigger: AGCCATGGCTGGAGCAGCTGGGACACAGGGCACCAAGTCCCTAGGCTGCACACAGCACAGAGACCCTGGGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR CCA 90 bp GTGGTGCGGACCAGCTCGCCAGCAACAGAAGGGTTTGTAGTCGGCCTGGCAGTGGGGGCAGAGCCCTCATaGGGAACCTCTCCTAGGGCA +
Preference number: 4 (lower is better)
Translates to: VVRTSSPATEGFVVGLAVGAEPS*GTSPRA
Trigger: TGCCCTAGGAGAGGTTCCCCATGAGGGCTCTGCCCC...CACTGCCAGGCCGACTACAAACCCTTCTGTTGCTGGCGAGCTGGTCCGCACCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR CCA 90 bp CAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGGAAGGATGGCCAGCCGGGTGTGGTGGTaGGCACCTGCAATCCCAGCT +
Preference number: 4 (lower is better)
Translates to: QGSFTLVKTGPGRQGRMASRVWW*APAIPA
Trigger: AGCTGGGATTGCAGGTGCCCACCACCACACCCGGCT...GGCCATCCTTCCCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR TCA 90 bp GTGGTGCGGACCAGCTCGCCAGCAACAGAAGGGTTTGTAGTCGGCCTGGCAGTGCAAAGGGGTAGTTGCTaGGGCTCCTCTCCACCACAT +
Preference number: 4 (lower is better)
Translates to: VVRTSSPATEGFVVGLAVQRGSC*GSSPPH
Trigger: ATGTGGTGGAGAGGAGCCTCAGCAACTACCCCTTTG...CACTGCCAGGCCGACTACAAACCCTTCTGTTGCTGGCGAGCTGGTCCGCACCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR CCA 90 bp AGCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGGAAGGATGACCGCATGCCTGCCGTaGCTCCCAGGTAAACGGGTG +
Preference number: 4 (lower is better)
Translates to: SQGSFTLVKTGPGRQGRMTACLP*LPGKRV
Trigger: CACCCGTTTACCTGGGAGCCACGGCAGGCATGCGGT...CATCCTTCCCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
CDS-3UTR CCA 90 bp CCTGGCAGACAGGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCCACCGCATGCCTGCCGTaGCTCCCAGGTAAACGGGTG +
Preference number: 4 (lower is better)
Translates to: PGRQGRMALNTAMEENAPTACLP*LPGKRV
Trigger: CACCCGTTTACCTGGGAGCCACGGCAGGCATGCGGT...GGGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTGTCTGCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
CDS-3UTR TCA 90 bp GCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGGAAGGATGGCTTCACTTTCCATCCTaGGCAACCGCATGCCTGCCG +
Preference number: 4 (lower is better)
Translates to: AKEASHSSRLALADREGWLHFPS*ATACLP
Trigger: CGGCAGGCATGCGGTTGCTCAGGATGGAAAGTGAAG...CCATCCTTCCCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
CDS-3UTR GCA 90 bp GTGGTGCGGACCAGCTCGCCAGCAACAGAAGGGTTTGTAGTCGGCCTGGCAGTGATGCCTTTCACCTCCTaGCATGATTCTGAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: VVRTSSPATEGFVVGLAVMPFTS*HDSEAS
Trigger: GGAGGCCTCAGAATCATGGCAGGAGGTGAAAGGCAT...CACTGCCAGGCCGACTACAAACCCTTCTGTTGCTGGCGAGCTGGTCCGCACCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR CCA 90 bp TGGGAGCCCGAGGCAATAGGATCACCTGAGATTGGGAGTTGGAGACCAGCCTGGCCGGCGTCGCTGCCCTaGATCTTGCCAATGAAATGG +
Preference number: 4 (lower is better)
Translates to: WEPEAIGSPEIGSWRPAWPASLP*ILPMKW
Trigger: CCATTTCATTGGCAAGATCCAGGGCAGCGACGCCGG...CCAGGCTGGTCTCCAACTCCCAATCTCAGGTGATCCTATTGCCTCGGGCTCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR CCA 90 bp GCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGGAAGGATGGCCGGCGTCGCTGCCCTaGATCTTGCCAATGAAATGG +
Preference number: 4 (lower is better)
Translates to: AKEASHSSRLALADREGWPASLP*ILPMKW
Trigger: CCATTTCATTGGCAAGATCCAGGGCAGCGACGCCGG...CCATCCTTCCCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CCA 90 bp CAGCATGTAGCCCAAAGTCCAGCCGGCGTCGCTGCCCTGGATCTTGCCAATGAACCGGCGTCGCTGCCCTaGATCTTGCCAATGAAATGG +
Preference number: 4 (lower is better)
Translates to: QHVAQSPAGVAALDLANEPASLP*ILPMKW
Trigger: CCATTTCATTGGCAAGATCCAGGGCAGCGACGCCGG...TTCATTGGCAAGATCCAGGGCAGCGACGCCGGCTGGACTTTGGGCTACATGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635076.1
ENST00000639992.1
CDS-3UTR TCA 90 bp GCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGGAAGGATGGCAAAGGGGTAGTTGCTaGGGCTCCTCTCCACCACAT +
Preference number: 4 (lower is better)
Translates to: AKEASHSSRLALADREGWQRGSC*GSSPPH
Trigger: ATGTGGTGGAGAGGAGCCTCAGCAACTACCCCTTTG...CCATCCTTCCCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR TCA 90 bp CAGACAGGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCCTGGACGAGTGGAGTGGGATATaGGCCTGGAGAGAGCTGGCG +
Preference number: 4 (lower is better)
Translates to: QTGKDGLEHCDGGKCSLDEWSGI*AWRELA
Trigger: CGCCAGCTCTCTCCAGGCTCATATCCCACTCCACTC...GTCCAGGGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTGTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR TCA 90 bp TGGGAGCCCGAGGCAATAGGATCACCTGAGATTGGGAGTTGGAGACCAGCCTGGGTTCTCCCTGCAGGATaGAGGGGGCCTGCAAAATGT +
Preference number: 4 (lower is better)
Translates to: WEPEAIGSPEIGSWRPAWVLPAG*RGPAKC
Trigger: ACATTTTGCAGGCCCCCTTCATCCTGCAGGGAGAAC...CCAGGCTGGTCTCCAACTCCCAATCTCAGGTGATCCTATTGCCTCGGGCTCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR CCA 90 bp TCAGTAAAAGCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGACCGCATGCCTGCCGTaGCTCCCAGGTAAACGGGTG +
Preference number: 4 (lower is better)
Translates to: SVKAKEASHSSRLALADRTACLP*LPGKRV
Trigger: CACCCGTTTACCTGGGAGCCACGGCAGGCATGCGGT...CCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGCTTTTACTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
CDS-3UTR CCA 90 bp AAAGCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGGAAGGACGTCAAGACTGGCCCTaGCAGACAGGGAAGGATGGC +
Preference number: 4 (lower is better)
Translates to: KAKEASHSSRLALADREGRQDWP*QTGKDG
Trigger: GCCATCCTTCCCTGTCTGCCAGGGCCAGTCTTGACG...TCCTTCCCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CCA 90 bp AGCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGGAAGGATGCACACTCGTCAAGACTaGCCCTGGCAGACAGGGAAG +
Preference number: 4 (lower is better)
Translates to: SQGSFTLVKTGPGRQGRMHTRQD*PWQTGK
Trigger: CTTCCCTGTCTGCCAGGGCCAGTCTTGACGAGTGTG...CATCCTTCCCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CCA 90 bp CAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGGAAGGATGGCCTGTCAGAGACCTTCATaGCAGCCCCTCCCATCACAG +
Preference number: 4 (lower is better)
Translates to: QGSFTLVKTGPGRQGRMACQRPS*QPLPSQ
Trigger: CTGTGATGGGAGGGGCTGCCATGAAGGTCTCTGACA...GGCCATCCTTCCCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR TCA 90 bp TGGCAGACAGGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCCTGCTTCACTTTCCATCCTaGGCAACCGCATGCCTGCCG +
Preference number: 4 (lower is better)
Translates to: WQTGKDGLEHCDGGKCSLLHFPS*ATACLP
Trigger: CGGCAGGCATGCGGTTGCTCAGGATGGAAAGTGAAG...CAGGGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTGTCTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
CDS-3UTR TCA 90 bp CCTGGCAGACAGGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCCCAAAGGGGTAGTTGCTaGGGCTCCTCTCCACCACAT +
Preference number: 4 (lower is better)
Translates to: PGRQGRMALNTAMEENAPQRGSC*GSSPPH
Trigger: ATGTGGTGGAGAGGAGCCTCAGCAACTACCCCTTTG...GGGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTGTCTGCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR TCA 90 bp CCCTGGCAGACAGGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCCAAAGGGGTAGTTGCTaGGGCTCCTCTCCACCACAT +
Preference number: 4 (lower is better)
Translates to: PWQTGKDGLEHCDGGKCSQRGSC*GSSPPH
Trigger: ATGTGGTGGAGAGGAGCCTCAGCAACTACCCCTTTG...GGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTGTCTGCCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR TCA 90 bp GCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGGAAGGATGGAGGGAAGGATGGCCTTaGACACTGCGATGGAGGAAA +
Preference number: 4 (lower is better)
Translates to: AKEASHSSRLALADREGWREGWP*TLRWRK
Trigger: TTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCT...CCATCCTTCCCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR GCA 90 bp GCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGGAAGGATGGACGGGTGTCTCTTGGTaGTGGGACCTTGGAATCACT +
Preference number: 4 (lower is better)
Translates to: AKEASHSSRLALADREGWTGVSW*WDLGIT
Trigger: AGTGATTCCAAGGTCCCAGCACCAAGAGACACCCGT...CCATCCTTCCCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
CDS-3UTR CCA 90 bp CAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGGAAGGATGGCCGGTGTCTCTTGGTGCTaGGACCTTGGAATCACTTCC +
Preference number: 4 (lower is better)
Translates to: QGSFTLVKTGPGRQGRMAGVSWC*DLGITS
Trigger: GGAAGTGATTCCAAGGTCCCAGCACCAAGAGACACC...GGCCATCCTTCCCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
CDS-3UTR CCA 90 bp CCTTGGCCAGTTTCTGCCAGAGTGCCTGATCCTTCCCATAGCACAAGAAGCTATACCGCATGCCTGCCGTaGCTCCCAGGTAAACGGGTG +
Preference number: 4 (lower is better)
Translates to: PWPVSARVPDPSHSTRSYTACLP*LPGKRV
Trigger: CACCCGTTTACCTGGGAGCCACGGCAGGCATGCGGT...ATAGCTTCTTGTGCTATGGGAAGGATCAGGCACTCTGGCAGAAACTGGCCAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483213.6
CDS-3UTR CCA 90 bp CAGCATGTAGCCCAAAGTCCAGCCGGCGTCGCTGCCCTGGATCTTGCCAATGAAAGTGGGAGAGAGGTGTaGACAATGGTTGCTCAGCTG +
Preference number: 4 (lower is better)
Translates to: QHVAQSPAGVAALDLANESGREV*TMVAQL
Trigger: CAGCTGAGCAACCATTGTCCACACCTCTCTCCCACT...TTCATTGGCAAGATCCAGGGCAGCGACGCCGGCTGGACTTTGGGCTACATGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CCA 90 bp GGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCCTGGACGATTTTAGCCGGGTGTGGTGGTaGGCACCTGCAATCCCAGCT +
Preference number: 4 (lower is better)
Translates to: GKDGLEHCDGGKCSLDDFSRVWW*APAIPA
Trigger: AGCTGGGATTGCAGGTGCCCACCACCACACCCGGCT...AAAATCGTCCAGGGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR CCA 90 bp CCTGGCAGACAGGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCCCCTGAGATTGGGAGTTaGAGACCAGCCTGGCCAACA +
Preference number: 4 (lower is better)
Translates to: PGRQGRMALNTAMEENAPPEIGS*RPAWPT
Trigger: TGTTGGCCAGGCTGGTCTCCAACTCCCAATCTCAGG...GGGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTGTCTGCCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR TCA 90 bp CAGCATGTAGCCCAAAGTCCAGCCGGCGTCGCTGCCCTGGATCTTGCCAATGAACTGCATTCTTCTACTTaGTGCACCACGCCTGTGTCA +
Preference number: 4 (lower is better)
Translates to: QHVAQSPAGVAALDLANELHSST*CTTPVS
Trigger: TGACACAGGCGTGGTGCATCAAGTAGAAGAATGCAG...TTCATTGGCAAGATCCAGGGCAGCGACGCCGGCTGGACTTTGGGCTACATGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000639992.1
CDS-3UTR TCA 90 bp ACAGGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCCTGGACGATCTTCACTTTCCATCCTaGGCAACCGCATGCCTGCCG +
Preference number: 4 (lower is better)
Translates to: TGKDGLEHCDGGKCSLDDLHFPS*ATACLP
Trigger: CGGCAGGCATGCGGTTGCTCAGGATGGAAAGTGAAG...ATCGTCCAGGGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
CDS-3UTR TCA 90 bp TGGGAGCCCGAGGCAATAGGATCACCTGAGATTGGGAGTTGGAGACCAGCCTGGGGCAGTAACTGGTGTTaGAGAGCTCCAGGATGCTTT +
Preference number: 4 (lower is better)
Translates to: WEPEAIGSPEIGSWRPAWGSNWC*RAPGCF
Trigger: AAAGCATCCTGGAGCTCTTCAACACCAGTTACTGCC...CCAGGCTGGTCTCCAACTCCCAATCTCAGGTGATCCTATTGCCTCGGGCTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR TCA 90 bp GCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGGAAGGATGGGGCAGTAACTGGTGTTaGAGAGCTCCAGGATGCTTT +
Preference number: 4 (lower is better)
Translates to: AKEASHSSRLALADREGWGSNWC*RAPGCF
Trigger: AAAGCATCCTGGAGCTCTTCAACACCAGTTACTGCC...CCATCCTTCCCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR TCA 90 bp CCTGGCAGACAGGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCCCCTGGATCTTGCCAATaGAATGGATGTGCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: PGRQGRMALNTAMEENAPPGSCQ*NGCAPR
Trigger: CCTGGGAGCACATCCATTTCATTGGCAAGATCCAGG...GGGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTGTCTGCCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR TCA 90 bp CCCTGGCAGACAGGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCAGGGAAGGATGGCCTTaGACACTGCGATGGAGGAAA +
Preference number: 4 (lower is better)
Translates to: PWQTGKDGLEHCDGGKCSREGWP*TLRWRK
Trigger: TTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCT...GGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTGTCTGCCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR GCA 90 bp CCCTGGCAGACAGGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCACGGGTGTCTCTTGGTaGTGGGACCTTGGAATCACT +
Preference number: 4 (lower is better)
Translates to: PWQTGKDGLEHCDGGKCSTGVSW*WDLGIT
Trigger: AGTGATTCCAAGGTCCCAGCACCAAGAGACACCCGT...GGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTGTCTGCCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
CDS-3UTR GCA 90 bp ACAGGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCCTGGACGATGTCCAGGCAAAAGTTTaGTGCAGGGGCAGAGCCCTC +
Preference number: 4 (lower is better)
Translates to: TGKDGLEHCDGGKCSLDDVQAKV*CRGRAL
Trigger: GAGGGCTCTGCCCCTGCAGCAAACTTTTGCCTGGAC...ATCGTCCAGGGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR CCA 90 bp TCAGTAAAAGCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGCCGGCGTCGCTGCCCTaGATCTTGCCAATGAAATGG +
Preference number: 4 (lower is better)
Translates to: SVKAKEASHSSRLALADRPASLP*ILPMKW
Trigger: CCATTTCATTGGCAAGATCCAGGGCAGCGACGCCGG...CCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGCTTTTACTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CCA 90 bp GCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGGAAGGATGGGAGAGGTGTGGACAATaGTTGCTCAGCTGGGATCAT +
Preference number: 4 (lower is better)
Translates to: AKEASHSSRLALADREGWERCGQ*LLSWDH
Trigger: ATGATCCCAGCTGAGCAACCATTGTCCACACCTCTC...CCATCCTTCCCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CCA 90 bp CTTGAGCACACAGCGTGGTACACCACAAATGCTCAACCAACAGCAGCGATGACACGTCAAGACTGGCCCTaGCAGACAGGGAAGGATGGC +
Preference number: 4 (lower is better)
Translates to: LEHTAWYTTNAQPTAAMTRQDWP*QTGKDG
Trigger: GCCATCCTTCCCTGTCTGCCAGGGCCAGTCTTGACG...TGTCATCGCTGCTGTTGGTTGAGCATTTGTGGTGTACCACGCTGTGTGCTCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR CCA 90 bp AACCTGAATGTCCTTGGCCAGTTTCTGCCAGAGTGCCTGATCCTTCCCATAGCACGTCAAGACTGGCCCTaGCAGACAGGGAAGGATGGC +
Preference number: 4 (lower is better)
Translates to: NLNVLGQFLPECLILPIARQDWP*QTGKDG
Trigger: GCCATCCTTCCCTGTCTGCCAGGGCCAGTCTTGACG...TGCTATGGGAAGGATCAGGCACTCTGGCAGAAACTGGCCAAGGACATTCAGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CCA 90 bp GCTTCAGTAAAAGCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACTGTGGAAGGGAAATGTaGGGCAGAGCCCCCACACAG +
Preference number: 4 (lower is better)
Translates to: ASVKAKEASHSSRLALADCGREM*GRAPTQ
Trigger: CTGTGTGGGGGCTCTGCCCCACATTTCCCTTCCACA...GTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGCTTTTACTGAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR TCA 90 bp AGCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGGAAGGATGGGCAGTAACTGGTGTTaGAGAGCTCCAGGATGCTTT +
Preference number: 4 (lower is better)
Translates to: SQGSFTLVKTGPGRQGRMGSNWC*RAPGCF
Trigger: AAAGCATCCTGGAGCTCTTCAACACCAGTTACTGCC...CATCCTTCCCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR TCA 90 bp TGGGAGCCCGAGGCAATAGGATCACCTGAGATTGGGAGTTGGAGACCAGCCTGGGCAAGAAAATCCCATTaGAGGCACACTGGGAGTAAG +
Preference number: 4 (lower is better)
Translates to: WEPEAIGSPEIGSWRPAWARKSH*RHTGSK
Trigger: CTTACTCCCAGTGTGCCTTCAATGGGATTTTCTTGC...CCAGGCTGGTCTCCAACTCCCAATCTCAGGTGATCCTATTGCCTCGGGCTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR TCA 90 bp GCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGGAAGGATGGCCCAGGAATCAGCTGTaGAATGATAGCCTTGCAGAA +
Preference number: 4 (lower is better)
Translates to: AKEASHSSRLALADREGWPRNQL*NDSLAE
Trigger: TTCTGCAAGGCTATCATTTCACAGCTGATTCCTGGG...CCATCCTTCCCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR TCA 90 bp CAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGGAAGGATGGCCTGCAAATCTCAGGTCTaGGTGTTCCACTCTGTAGCA +
Preference number: 4 (lower is better)
Translates to: QGSFTLVKTGPGRQGRMACKSQV*VFHSVA
Trigger: TGCTACAGAGTGGAACACTCAGACCTGAGATTTGCA...GGCCATCCTTCCCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR TCA 90 bp CAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGGAAGGATGGCCGGGACAAGGTCAGAATaGAACATCACCAGTCAATCC +
Preference number: 4 (lower is better)
Translates to: QGSFTLVKTGPGRQGRMAGTRSE*NITSQS
Trigger: GGATTGACTGGTGATGTTTCATTCTGACCTTGTCCC...GGCCATCCTTCCCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR TCA 90 bp CCTGGCAGACAGGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCCGGCTTCCGGTTTGTGTaGGAGCTTTTCTTTCCCCAT +
Preference number: 4 (lower is better)
Translates to: PGRQGRMALNTAMEENAPGFRFV*ELFFPH
Trigger: ATGGGGAAAGAAAAGCTCTCACACAAACCGGAAGCC...GGGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTGTCTGCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR TCA 90 bp GTGGTGCGGACCAGCTCGCCAGCAACAGAAGGGTTTGTAGTCGGCCTGGCAGTGTCTGAAGGAGACTTGTaGAGTCTAATTCCAACTTGC +
Preference number: 4 (lower is better)
Translates to: VVRTSSPATEGFVVGLAVSEGDL*SLIPTC
Trigger: GCAAGTTGGAATTAGACTTCACAAGTCTCCTTCAGA...CACTGCCAGGCCGACTACAAACCCTTCTGTTGCTGGCGAGCTGGTCCGCACCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR TCA 90 bp AGTAAAAGCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGGACCAGGGGGAGGTAATTaGATCAAGGGGGCTGGTCTT +
Preference number: 4 (lower is better)
Translates to: SKSQGSFTLVKTGPGRQGPGGGN*IKGAGL
Trigger: AAGACCAGCCCCCTTGATTCAATTACCTCCCCCTGG...TCCCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGCTTTTACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR GCA 90 bp CCCTGGCAGACAGGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCCAGTTTCTGCCAGAGTaGCTGATCCTTCCCATAGCA +
Preference number: 4 (lower is better)
Translates to: PWQTGKDGLEHCDGGKCSQFLPE*LILPIA
Trigger: TGCTATGGGAAGGATCAGGCACTCTGGCAGAAACTG...GGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTGTCTGCCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR GCA 90 bp CCCTGGCAGACAGGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCGGTGTGGACAATGGTTaGTCAGCTGGGATCATGTTG +
Preference number: 4 (lower is better)
Translates to: PWQTGKDGLEHCDGGKCSGVDNG*SAGIML
Trigger: CAACATGATCCCAGCTGAGCAACCATTGTCCACACC...GGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTGTCTGCCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR GCA 90 bp CCTGGCAGACAGGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCCACGTTAGACTCCTTCTaGTGGCTTGTCAGGTCCTTG +
Preference number: 4 (lower is better)
Translates to: PGRQGRMALNTAMEENAPTLDSF*WLVRSL
Trigger: CAAGGACCTGACAAGCCAGCAGAAGGAGTCTAACGT...GGGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTGTCTGCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453258.6
CDS-3UTR CCA 90 bp TGGCAGACAGGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCCTGGGTGTCTCTTGGTGCTaGGACCTTGGAATCACTTCC +
Preference number: 4 (lower is better)
Translates to: WQTGKDGLEHCDGGKCSLGVSWC*DLGITS
Trigger: GGAAGTGATTCCAAGGTCCCAGCACCAAGAGACACC...CAGGGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTGTCTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
CDS-3UTR CCA 90 bp AGCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGGAAGGATGCAACCTGAATGTCCTTaGCCAGTTTCTGCCAGAGTG +
Preference number: 4 (lower is better)
Translates to: SQGSFTLVKTGPGRQGRMQPECP*PVSARV
Trigger: CACTCTGGCAGAAACTGGCCAAGGACATTCAGGTTG...CATCCTTCCCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CCA 90 bp CCCTGGCAGACAGGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCGAGAGGTGTGGACAATaGTTGCTCAGCTGGGATCAT +
Preference number: 4 (lower is better)
Translates to: PWQTGKDGLEHCDGGKCSERCGQ*LLSWDH
Trigger: ATGATCCCAGCTGAGCAACCATTGTCCACACCTCTC...GGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTGTCTGCCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CCA 90 bp TGGCAGACAGGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCCTGACCCACAGAGCAGGCTaGGAATGGAATGTGTGTCTG +
Preference number: 4 (lower is better)
Translates to: WQTGKDGLEHCDGGKCSLTHRAG*EWNVCL
Trigger: CAGACACACATTCCATTCCCAGCCTGCTCTGTGGGT...CAGGGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTGTCTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR CCA 90 bp GGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCCTGGACGATTTTCTACCCCACCCAGAGTaGCCCAAAGCAGATTGCTGG +
Preference number: 4 (lower is better)
Translates to: GKDGLEHCDGGKCSLDDFLPHPE*PKADCW
Trigger: CCAGCAATCTGCTTTGGGCCACTCTGGGTGGGGTAG...AAAATCGTCCAGGGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR CCA 90 bp GGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCCTGGACGATTTTATTAGCCGGGTGTGGTaGTGGGCACCTGCAATCCCA +
Preference number: 4 (lower is better)
Translates to: GKDGLEHCDGGKCSLDDFISRVW*WAPAIP
Trigger: TGGGATTGCAGGTGCCCACCACCACACCCGGCTAAT...AAAATCGTCCAGGGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR CCA 90 bp AGTAAAAGCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGGACCTGAGATTGGGAGTTaGAGACCAGCCTGGCCAACA +
Preference number: 4 (lower is better)
Translates to: SKSQGSFTLVKTGPGRQGPEIGS*RPAWPT
Trigger: TGTTGGCCAGGCTGGTCTCCAACTCCCAATCTCAGG...TCCCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGCTTTTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR CCA 90 bp AAAGCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGGAAGGAAATGCGAGGCTAATGTaGGAGCTGCCACAGCATCCT +
Preference number: 4 (lower is better)
Translates to: KAKEASHSSRLALADREGNARLM*ELPQHP
Trigger: AGGATGCTGTGGCAGCTCCCACATTAGCCTCGCATT...TCCTTCCCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR CCA 90 bp TCAGTAAAAGCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGATAGAGCTTGGGCTGTaGCTTCAGAGGGTAGAGGCC +
Preference number: 4 (lower is better)
Translates to: SVKAKEASHSSRLALADRIELGL*LQRVEA
Trigger: GGCCTCTACCCTCTGAAGCCACAGCCCAAGCTCTAT...CCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGCTTTTACTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR CCA 90 bp ATATATGGAAACACCTGGATGTCCAGGCAAAAGTTTGCTGCAGGGGCAGAGCCCAGTGGTTTTGTGGGCTaGGCCCAGGGTCTCTGTGCT +
Preference number: 4 (lower is better)
Translates to: IYGNTWMSRQKFAAGAEPSGFVG*AQGLCA
Trigger: AGCACAGAGACCCTGGGCCCAGCCCACAAAACCACT...GGGCTCTGCCCCTGCAGCAAACTTTTGCCTGGACATCCAGGTGTTTCCATATAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371205.5
3UTR CAA 72 bp GGGGCGGAGCTGCACAAGACCATGGGAACCTATCTCTaGCATCAGCATGACCTGAATGTGAGACATGGAGTC +
Preference number: 4 (lower is better)
Translates to: GAELHKTMGTYL*HQHDLNVRHGV
Trigger: GACTCCATGTCTCACATTCAGGTCATGCTGATGCAAGAGATAGGTTCCCATGGTCTTGTGCAGCTCCGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR TCA 90 bp GCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGGAAGGATGGATGTATAAACTTGTGTaGGAAGAACCCGCATCCAGC +
Preference number: 4 (lower is better)
Translates to: AKEASHSSRLALADREGWMYKLV*EEPASS
Trigger: GCTGGATGCGGGTTCTTCTCACACAAGTTTATACAT...CCATCCTTCCCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000639992.1
CDS-3UTR TCA 90 bp CAGACAGGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCCTGGACCTGCATTCTTCTACTTaGTGCACCACGCCTGTGTCA +
Preference number: 4 (lower is better)
Translates to: QTGKDGLEHCDGGKCSLDLHSST*CTTPVS
Trigger: TGACACAGGCGTGGTGCATCAAGTAGAAGAATGCAG...GTCCAGGGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTGTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000639992.1
CDS-3UTR TCA 90 bp CCTGGCAGACAGGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCCATCTCCTCCCAAGGCTaGGCACAGAACTTTTTCATC +
Preference number: 4 (lower is better)
Translates to: PGRQGRMALNTAMEENAPISSQG*AQNFFI
Trigger: GATGAAAAAGTTCTGTGCTCAGCCTTGGGAGGAGAT...GGGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTGTCTGCCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR TCA 90 bp ACAGGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCCTGGACGATCCTGGATCTTGCCAATaGAATGGATGTGCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: TGKDGLEHCDGGKCSLDDPGSCQ*NGCAPR
Trigger: CCTGGGAGCACATCCATTTCATTGGCAAGATCCAGG...ATCGTCCAGGGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR TCA 90 bp CCCTGGCAGACAGGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCGGGAGAATAGAACCATaGGGAAGACATAGGTGGAGT +
Preference number: 4 (lower is better)
Translates to: PWQTGKDGLEHCDGGKCSGRIEP*GRHRWS
Trigger: ACTCCACCTATGTCTTCCTCATGGTTCTATTCTCCC...GGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTGTCTGCCAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR TCA 90 bp AGTAAAAGCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGGAAGGGAAGGATGGCCTTaGACACTGCGATGGAGGAAA +
Preference number: 4 (lower is better)
Translates to: SKSQGSFTLVKTGPGRQGREGWP*TLRWRK
Trigger: TTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCT...TCCCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGCTTTTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR TCA 90 bp CCCTGGCAGACAGGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCGGGTATGGGAACCACTaGTTAGCATCATATGCCAGA +
Preference number: 4 (lower is better)
Translates to: PWQTGKDGLEHCDGGKCSGYGNH*LASYAR
Trigger: TCTGGCATATGATGCTAATCAGTGGTTCCCATACCC...GGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTGTCTGCCAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR TCA 90 bp TGGCAGACAGGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCCTGCCAAGGGAAAGACAATaGGGGCTTAGTTCCTGTGTC +
Preference number: 4 (lower is better)
Translates to: WQTGKDGLEHCDGGKCSLPRERQ*GLSSCV
Trigger: GACACAGGAACTAAGCCCTCATTGTCTTTCCCTTGG...CAGGGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTGTCTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR TCA 90 bp CCTGGCAGACAGGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCCGCAACTATTGGTATTTaGATCAGAGAGGGGCCAGAC +
Preference number: 4 (lower is better)
Translates to: PGRQGRMALNTAMEENAPATIGI*IREGPD
Trigger: GTCTGGCCCCTCTCTGATTCAAATACCAATAGTTGC...GGGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTGTCTGCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR TCA 90 bp CAGACAGGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCCTGGACCCTATGGGCCTCTACTaGGAGCATGGAGGTAATACA +
Preference number: 4 (lower is better)
Translates to: QTGKDGLEHCDGGKCSLDPMGLY*EHGGNT
Trigger: TGTATTACCTCCATGCTCTCAGTAGAGGCCCATAGG...GTCCAGGGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTGTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR TCA 90 bp AGCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGGAAGGATGTCTCTTGCATCAGCATaGCCTGAATGTGAGACATGG +
Preference number: 4 (lower is better)
Translates to: SQGSFTLVKTGPGRQGRMSLASA*PECETW
Trigger: CCATGTCTCACATTCAGGTCATGCTGATGCAAGAGA...CATCCTTCCCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR GCA 90 bp TCAGTAAAAGCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGACGGGTGTCTCTTGGTaGTGGGACCTTGGAATCACT +
Preference number: 4 (lower is better)
Translates to: SVKAKEASHSSRLALADRTGVSW*WDLGIT
Trigger: AGTGATTCCAAGGTCCCAGCACCAAGAGACACCCGT...CCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGCTTTTACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
CDS-3UTR GCA 90 bp TGGCAGACAGGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCCTGCAGTTTCTGCCAGAGTaGCTGATCCTTCCCATAGCA +
Preference number: 4 (lower is better)
Translates to: WQTGKDGLEHCDGGKCSLQFLPE*LILPIA
Trigger: TGCTATGGGAAGGATCAGGCACTCTGGCAGAAACTG...CAGGGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTGTCTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR GCA 90 bp CAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGGAAGGATGGCCTCTCAAATCTCTTGGTaGAGGGGGTCTTGTAAAGGT +
Preference number: 4 (lower is better)
Translates to: QGSFTLVKTGPGRQGRMASQISW*RGSCKG
Trigger: ACCTTTACAAGACCCCCTGCACCAAGAGATTTGAGA...GGCCATCCTTCCCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR GCA 90 bp GCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGGAAGGATGGTCTCAAATCTCTTGGTaGAGGGGGTCTTGTAAAGGT +
Preference number: 4 (lower is better)
Translates to: AKEASHSSRLALADREGWSQISW*RGSCKG
Trigger: ACCTTTACAAGACCCCCTGCACCAAGAGATTTGAGA...CCATCCTTCCCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR GCA 90 bp CAGACAGGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCCTGGACGGTGTGGACAATGGTTaGTCAGCTGGGATCATGTTG +
Preference number: 4 (lower is better)
Translates to: QTGKDGLEHCDGGKCSLDGVDNG*SAGIML
Trigger: CAACATGATCCCAGCTGAGCAACCATTGTCCACACC...GTCCAGGGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTGTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR GCA 90 bp CAGACAGGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCCTGGACAGGATGAAGGGGGCCTaGAAAATGTCTCCTACTTCC +
Preference number: 4 (lower is better)
Translates to: QTGKDGLEHCDGGKCSLDRMKGA*KMSPTS
Trigger: GGAAGTAGGAGACATTTTGCAGGCCCCCTTCATCCT...GTCCAGGGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTGTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR CCA 90 bp AGTAAAAGCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGGAGGTGTCTCTTGGTGCTaGGACCTTGGAATCACTTCC +
Preference number: 4 (lower is better)
Translates to: SKSQGSFTLVKTGPGRQGGVSWC*DLGITS
Trigger: GGAAGTGATTCCAAGGTCCCAGCACCAAGAGACACC...TCCCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGCTTTTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
CDS-3UTR CCA 90 bp AGTAAAAGCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGGAAGTGGGAGAGAGGTGTaGACAATGGTTGCTCAGCTG +
Preference number: 4 (lower is better)
Translates to: SKSQGSFTLVKTGPGRQGSGREV*TMVAQL
Trigger: CAGCTGAGCAACCATTGTCCACACCTCTCTCCCACT...TCCCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGCTTTTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CCA 90 bp GGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCCTGGACGATTTTTCTCCTAGGGCAGTGTaGAAGGGAAATGTGGGGCAG +
Preference number: 4 (lower is better)
Translates to: GKDGLEHCDGGKCSLDDFSPRAV*KGNVGQ
Trigger: CTGCCCCACATTTCCCTTCCACACTGCCCTAGGAGA...AAAATCGTCCAGGGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR CCA 90 bp AGTAAAAGCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGGAGAAAAAGTGGTTTTGTaGGCTGGGCCCAGGGTCTCT +
Preference number: 4 (lower is better)
Translates to: SKSQGSFTLVKTGPGRQGEKVVL*AGPRVS
Trigger: AGAGACCCTGGGCCCAGCCCACAAAACCACTTTTTC...TCCCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGCTTTTACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR CCA 90 bp GCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGGAAGGATGGTTGAATCAAGGGGGCTaGTCTTTCCCATGCTATTCT +
Preference number: 4 (lower is better)
Translates to: AKEASHSSRLALADREGWLNQGG*SFPCYS
Trigger: AGAATAGCATGGGAAAGACCAGCCCCCTTGATTCAA...CCATCCTTCCCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR TCA 90 bp CCCTGGCAGACAGGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCATGTATAAACTTGTGTaGGAAGAACCCGCATCCAGC +
Preference number: 4 (lower is better)
Translates to: PWQTGKDGLEHCDGGKCSMYKLV*EEPASS
Trigger: GCTGGATGCGGGTTCTTCTCACACAAGTTTATACAT...GGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTGTCTGCCAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000639992.1
CDS-3UTR TCA 90 bp TCAGTAAAAGCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGCTGCATTCTTCTACTTaGTGCACCACGCCTGTGTCA +
Preference number: 4 (lower is better)
Translates to: SVKAKEASHSSRLALADRLHSST*CTTPVS
Trigger: TGACACAGGCGTGGTGCATCAAGTAGAAGAATGCAG...CCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGCTTTTACTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000639992.1
CDS-3UTR TCA 90 bp CCCTGGCAGACAGGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCCATATGGGACTATGCTaGACCACCTTGTTTTCTGAC +
Preference number: 4 (lower is better)
Translates to: PWQTGKDGLEHCDGGKCSHMGLC*TTLFSD
Trigger: GTCAGAAAACAAGGTGGTTCAGCATAGTCCCATATG...GGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTGTCTGCCAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR TCA 90 bp CCTGGCAGACAGGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCCCATATGGGACTATGCTaGACCACCTTGTTTTCTGAC +
Preference number: 4 (lower is better)
Translates to: PGRQGRMALNTAMEENAPHMGLC*TTLFSD
Trigger: GTCAGAAAACAAGGTGGTTCAGCATAGTCCCATATG...GGGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTGTCTGCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR TCA 90 bp CAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGGAAGGATGGCCGAAAGCATGGGTCCCTaGGAATTTCATTACTTGCAA +
Preference number: 4 (lower is better)
Translates to: QGSFTLVKTGPGRQGRMAESMGP*EFHYLQ
Trigger: TTGCAAGTAATGAAATTCTCAGGGACCCATGCTTTC...GGCCATCCTTCCCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR TCA 90 bp TGGCAGACAGGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCCTGGCAAGAAAATCCCATTaGAGGCACACTGGGAGTAAG +
Preference number: 4 (lower is better)
Translates to: WQTGKDGLEHCDGGKCSLARKSH*RHTGSK
Trigger: CTTACTCCCAGTGTGCCTTCAATGGGATTTTCTTGC...CAGGGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTGTCTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR TCA 90 bp AAAGCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGGAAGGAATCTCCTCCCAAGGCTaGGCACAGAACTTTTTCATC +
Preference number: 4 (lower is better)
Translates to: KAKEASHSSRLALADREGISSQG*AQNFFI
Trigger: GATGAAAAAGTTCTGTGCTCAGCCTTGGGAGGAGAT...TCCTTCCCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR TCA 90 bp CAGACAGGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCCTGGACCCCAGGAATCAGCTGTaGAATGATAGCCTTGCAGAA +
Preference number: 4 (lower is better)
Translates to: QTGKDGLEHCDGGKCSLDPRNQL*NDSLAE
Trigger: TTCTGCAAGGCTATCATTTCACAGCTGATTCCTGGG...GTCCAGGGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTGTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR TCA 90 bp AAAGCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGGAAGGAGGGAGAATAGAACCATaGGGAAGACATAGGTGGAGT +
Preference number: 4 (lower is better)
Translates to: KAKEASHSSRLALADREGGRIEP*GRHRWS
Trigger: ACTCCACCTATGTCTTCCTCATGGTTCTATTCTCCC...TCCTTCCCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR TCA 90 bp GGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCCTGGACGATTTTAGGGAAGGATGGCCTTaGACACTGCGATGGAGGAAA +
Preference number: 4 (lower is better)
Translates to: GKDGLEHCDGGKCSLDDFREGWP*TLRWRK
Trigger: TTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCT...AAAATCGTCCAGGGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR TCA 90 bp CAGACAGGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCCTGGACTGCAAATCTCAGGTCTaGGTGTTCCACTCTGTAGCA +
Preference number: 4 (lower is better)
Translates to: QTGKDGLEHCDGGKCSLDCKSQV*VFHSVA
Trigger: TGCTACAGAGTGGAACACTCAGACCTGAGATTTGCA...GTCCAGGGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTGTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR TCA 90 bp AAAGCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGGAAGGACATGCTTGGAAGTTATaGGGAGACAGCCTGGTATGT +
Preference number: 4 (lower is better)
Translates to: KAKEASHSSRLALADREGHAWKL*GDSLVC
Trigger: ACATACCAGGCTGTCTCCTCATAACTTCCAAGCATG...TCCTTCCCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR TCA 90 bp CAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGGAAGGATGGCCGGTGATCATCATCACTaGTCATGGTGTCAGTTGATT +
Preference number: 4 (lower is better)
Translates to: QGSFTLVKTGPGRQGRMAGDHHH*SWCQLI
Trigger: AATCAACTGACACCATGATCAGTGATGATGATCACC...GGCCATCCTTCCCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR TCA 90 bp CAGGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCCTGGACGATTGTTGAGAAGACAACCTaGGTGGTGTTGGGTGAACAG +
Preference number: 4 (lower is better)
Translates to: QGRMALNTAMEENAPWTIVEKTT*VVLGEQ
Trigger: CTGTTCACCCAACACCACTCAGGTTGTCTTCTCAAC...AATCGTCCAGGGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR TCA 90 bp GGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCCTGGACGATTTTGCTTCACCCAGACACTaGACAGAATGGTCTCAGTGC +
Preference number: 4 (lower is better)
Translates to: GKDGLEHCDGGKCSLDDFASPRH*TEWSQC
Trigger: GCACTGAGACCATTCTGTTCAGTGTCTGGGTGAAGC...AAAATCGTCCAGGGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR TCA 90 bp GGGTGCAGGGTCTCTTCATGTTTCCATGGTAAGGTCTATAGCTGCTGCTTCATGGAGCCCAGGGAGGAATaGTATGGTTTGGCTGTGTCC +
Preference number: 4 (lower is better)
Translates to: GCRVSSCFHGKVYSCCFMEPREE*YGLAVS
Trigger: GGACACAGCCAAACCATATCATTCCTCCCTGGGCTC...CATGAAGCAGCAGCTATAGACCTTACCATGGAAACATGAAGAGACCCTGCACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR TCA 90 bp CAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGGAAGGATGGCCACCCGCTCGAAAAACTaGAAGTCAAGAACAGTTCTT +
Preference number: 4 (lower is better)
Translates to: QGSFTLVKTGPGRQGRMATRSKN*KSRTVL
Trigger: AAGAACTGTTCTTGACTTTCAGTTTTTCGAGCGGGT...GGCCATCCTTCCCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371207.8
CDS-3UTR GCA 90 bp AGCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGGAAGGATGAACGTTTTCTGGCAATaGTTTGTTCTGGGTCAACCC +
Preference number: 4 (lower is better)
Translates to: SQGSFTLVKTGPGRQGRMNVFWQ*FVLGQP
Trigger: GGGTTGACCCAGAACAAAGCATTGCCAGAAAACGTT...CATCCTTCCCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR GCA 90 bp TTGCAACCTGAATGTCCTTGGCCAGTTTCTGCCAGAGTGCCTGATCCTTCCCATACGGGTGTCTCTTGGTaGTGGGACCTTGGAATCACT +
Preference number: 4 (lower is better)
Translates to: LQPECPWPVSARVPDPSHTGVSW*WDLGIT
Trigger: AGTGATTCCAAGGTCCCAGCACCAAGAGACACCCGT...ATGGGAAGGATCAGGCACTCTGGCAGAAACTGGCCAAGGACATTCAGGTTGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483213.6
CDS-3UTR GCA 90 bp AGTAAAAGCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGGACAGTTTCTGCCAGAGTaGCTGATCCTTCCCATAGCA +
Preference number: 4 (lower is better)
Translates to: SKSQGSFTLVKTGPGRQGQFLPE*LILPIA
Trigger: TGCTATGGGAAGGATCAGGCACTCTGGCAGAAACTG...TCCCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGCTTTTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR GCA 90 bp CAGGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCCTGGACGATTGGTGTGGACAATGGTTaGTCAGCTGGGATCATGTTG +
Preference number: 4 (lower is better)
Translates to: QGRMALNTAMEENAPWTIGVDNG*SAGIML
Trigger: CAACATGATCCCAGCTGAGCAACCATTGTCCACACC...AATCGTCCAGGGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR GCA 90 bp CAGGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCCTGGACGATTGATGGCCTTGAACACTaGGATGGAGGAAAATGCTCC +
Preference number: 4 (lower is better)
Translates to: QGRMALNTAMEENAPWTIDGLEH*DGGKCS
Trigger: GGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATC...AATCGTCCAGGGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR GCA 90 bp ACAGGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCCTGGACGATGATGGCCTTGAACACTaGGATGGAGGAAAATGCTCC +
Preference number: 4 (lower is better)
Translates to: TGKDGLEHCDGGKCSLDDDGLEH*DGGKCS
Trigger: GGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATC...ATCGTCCAGGGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR GCA 90 bp TGGGAGCCCGAGGCAATAGGATCACCTGAGATTGGGAGTTGGAGACCAGCCTGGAACAGACCAGCTTTCTaGCTCCCTTTCTATGAATAC +
Preference number: 4 (lower is better)
Translates to: WEPEAIGSPEIGSWRPAWNRPAF*LPFYEY
Trigger: GTATTCATAGAAAGGGAGGCAGAAAGCTGGTCTGTT...CCAGGCTGGTCTCCAACTCCCAATCTCAGGTGATCCTATTGCCTCGGGCTCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR GCA 90 bp AGTAAAAGCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGGATCACTGAGTATGAGGTaGTGGTCTCCAAAGGCAGAG +
Preference number: 4 (lower is better)
Translates to: SKSQGSFTLVKTGPGRQGSLSMR*WSPKAE
Trigger: CTCTGCCTTTGGAGACCAGCACCTCATACTCAGTGA...TCCCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGCTTTTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR GCA 90 bp TCAGTAAAAGCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGCTGCCGTGTAAGAAATaGCTTTCACCTCCTGCCATG +
Preference number: 4 (lower is better)
Translates to: SVKAKEASHSSRLALADRLPCKK*LSPPAM
Trigger: CATGGCAGGAGGTGAAAGGCATTTCTTACACGGCAG...CCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGCTTTTACTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR GCA 90 bp AGTAAAAGCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGGAAGTCATTCAGCAAGGTaGCTTCCTCTGGATGCACTG +
Preference number: 4 (lower is better)
Translates to: SKSQGSFTLVKTGPGRQGSHSAR*LPLDAL
Trigger: CAGTGCATCCAGAGGAAGGCACCTTGCTGAATGACT...TCCCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGCTTTTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR CCA 90 bp GGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCCTGGACGATTTTGGTGTCTCTTGGTGCTaGGACCTTGGAATCACTTCC +
Preference number: 4 (lower is better)
Translates to: GKDGLEHCDGGKCSLDDFGVSWC*DLGITS
Trigger: GGAAGTGATTCCAAGGTCCCAGCACCAAGAGACACC...AAAATCGTCCAGGGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
CDS-3UTR CCA 90 bp GAATGTCCTTGGCCAGTTTCTGCCAGAGTGCCTGATCCTTCCCATAGCACAAGAGGTGTCTCTTGGTGCTaGGACCTTGGAATCACTTCC +
Preference number: 4 (lower is better)
Translates to: ECPWPVSARVPDPSHSTRGVSWC*DLGITS
Trigger: GGAAGTGATTCCAAGGTCCCAGCACCAAGAGACACC...TCTTGTGCTATGGGAAGGATCAGGCACTCTGGCAGAAACTGGCCAAGGACATTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483213.6
CDS-3UTR CCA 90 bp GCCGAAGTCCTTGAGGCAAAGGATATTGAATACCTCCAAAAGAAAGGCTTCAGTACCGCATGCCTGCCGTaGCTCCCAGGTAAACGGGTG +
Preference number: 4 (lower is better)
Translates to: AEVLEAKDIEYLQKKGFSTACLP*LPGKRV
Trigger: CACCCGTTTACCTGGGAGCCACGGCAGGCATGCGGT...ACTGAAGCCTTTCTTTTGGAGGTATTCAATATCCTTTGCCTCAAGGACTTCGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
CDS-3UTR CCA 90 bp CAGGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCCTGGACGATTCAACCTGAATGTCCTTaGCCAGTTTCTGCCAGAGTG +
Preference number: 4 (lower is better)
Translates to: QGRMALNTAMEENAPWTIQPECP*PVSARV
Trigger: CACTCTGGCAGAAACTGGCCAAGGACATTCAGGTTG...AATCGTCCAGGGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CCA 90 bp CAGACAGGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCCTGGACCAATGGTTGCTCAGCTaGGATCATGTTGGTCAGGTT +
Preference number: 4 (lower is better)
Translates to: QTGKDGLEHCDGGKCSLDQWLLS*DHVGQV
Trigger: AACCTGACCAACATGATCCCAGCTGAGCAACCATTG...GTCCAGGGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTGTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CCA 90 bp TGGCAGACAGGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCCTGCAATGGTTGCTCAGCTaGGATCATGTTGGTCAGGTT +
Preference number: 4 (lower is better)
Translates to: WQTGKDGLEHCDGGKCSLQWLLS*DHVGQV
Trigger: AACCTGACCAACATGATCCCAGCTGAGCAACCATTG...CAGGGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTGTCTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CCA 90 bp TCAGTAAAAGCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGGAGAGGTGTGGACAATaGTTGCTCAGCTGGGATCAT +
Preference number: 4 (lower is better)
Translates to: SVKAKEASHSSRLALADRERCGQ*LLSWDH
Trigger: ATGATCCCAGCTGAGCAACCATTGTCCACACCTCTC...CCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGCTTTTACTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CCA 90 bp ACAGGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCCTGGACGATGAGAGGTGTGGACAATaGTTGCTCAGCTGGGATCAT +
Preference number: 4 (lower is better)
Translates to: TGKDGLEHCDGGKCSLDDERCGQ*LLSWDH
Trigger: ATGATCCCAGCTGAGCAACCATTGTCCACACCTCTC...ATCGTCCAGGGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CCA 90 bp CCCATTGAAGGCACACTGGGAGTAAGGGCAGTAACTGGTGTTGAAGAGCTCCAGGAGAGGTGTGGACAATaGTTGCTCAGCTGGGATCAT +
Preference number: 4 (lower is better)
Translates to: PIEGTLGVRAVTGVEELQERCGQ*LLSWDH
Trigger: ATGATCCCAGCTGAGCAACCATTGTCCACACCTCTC...CTGGAGCTCTTCAACACCAGTTACTGCCCTTACTCCCAGTGTGCCTTCAATGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CCA 90 bp GCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGGAAGGATGGGGAGAAAGGTGTAGCTaGGAAAAACTCATGAAAGAG +
Preference number: 4 (lower is better)
Translates to: AKEASHSSRLALADREGWGERCS*EKLMKE
Trigger: CTCTTTCATGAGTTTTTCCCAGCTACACCTTTCTCC...CCATCCTTCCCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CCA 90 bp CAGCATGTAGCCCAAAGTCCAGCCGGCGTCGCTGCCCTGGATCTTGCCAATGAAGGAGAAAGGTGTAGCTaGGAAAAACTCATGAAAGAG +
Preference number: 4 (lower is better)
Translates to: QHVAQSPAGVAALDLANEGERCS*EKLMKE
Trigger: CTCTTTCATGAGTTTTTCCCAGCTACACCTTTCTCC...TTCATTGGCAAGATCCAGGGCAGCGACGCCGGCTGGACTTTGGGCTACATGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CCA 90 bp TGGCAGACAGGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCCTGATGTTGTGTGACGGGTaGCAACACTTTCAGACTTGG +
Preference number: 4 (lower is better)
Translates to: WQTGKDGLEHCDGGKCSLMLCDG*QHFQTW
Trigger: CCAAGTCTGAAAGTGTTGCCACCCGTCACACAACAT...CAGGGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTGTCTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR CCA 90 bp GCTTCAGTAAAAGCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACGGGGCCAGACCAGTTTaGGTGAAACTCAGTTCATCT +
Preference number: 4 (lower is better)
Translates to: ASVKAKEASHSSRLALADGARPV*VKLSSS
Trigger: AGATGAACTGAGTTTCACCCAAACTGGTCTGGCCCC...GTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGCTTTTACTGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR TCA 90 bp AAAGCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGGAAGGAATGTATAAACTTGTGTaGGAAGAACCCGCATCCAGC +
Preference number: 4 (lower is better)
Translates to: KAKEASHSSRLALADREGMYKLV*EEPASS
Trigger: GCTGGATGCGGGTTCTTCTCACACAAGTTTATACAT...TCCTTCCCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000639992.1
CDS-3UTR TCA 90 bp TGGCAGACAGGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCCTGATGTATAAACTTGTGTaGGAAGAACCCGCATCCAGC +
Preference number: 4 (lower is better)
Translates to: WQTGKDGLEHCDGGKCSLMYKLV*EEPASS
Trigger: GCTGGATGCGGGTTCTTCTCACACAAGTTTATACAT...CAGGGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTGTCTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000639992.1
CDS-3UTR TCA 90 bp AGCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGGAAGGATGACCTTGTTTTCTGACTaGATTTGCCCAGCAGATAGT +
Preference number: 4 (lower is better)
Translates to: SQGSFTLVKTGPGRQGRMTLFSD*ICPADS
Trigger: ACTATCTGCTGGGCAAATTCAGTCAGAAAACAAGGT...CATCCTTCCCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR TCA 90 bp CCCTGGCAGACAGGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCACCTTGTTTTCTGACTaGATTTGCCCAGCAGATAGT +
Preference number: 4 (lower is better)
Translates to: PWQTGKDGLEHCDGGKCSTLFSD*ICPADS
Trigger: ACTATCTGCTGGGCAAATTCAGTCAGAAAACAAGGT...GGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTGTCTGCCAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR TCA 90 bp TGGCAGACAGGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCCTGAACCACCTTGTTTTCTaGCTGAATTTGCCCAGCAGA +
Preference number: 4 (lower is better)
Translates to: WQTGKDGLEHCDGGKCSLNHLVF*LNLPSR
Trigger: TCTGCTGGGCAAATTCAGTCAGAAAACAAGGTGGTT...CAGGGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTGTCTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR TCA 90 bp TTGCAACCTGAATGTCCTTGGCCAGTTTCTGCCAGAGTGCCTGATCCTTCCCATGGCAGTAACTGGTGTTaGAGAGCTCCAGGATGCTTT +
Preference number: 4 (lower is better)
Translates to: LQPECPWPVSARVPDPSHGSNWC*RAPGCF
Trigger: AAAGCATCCTGGAGCTCTTCAACACCAGTTACTGCC...ATGGGAAGGATCAGGCACTCTGGCAGAAACTGGCCAAGGACATTCAGGTTGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635076.1
ENST00000639992.1
CDS-3UTR TCA 90 bp TTCCCACATGTTGTGGGAGGGACGCAGTGGGAGGTAATTGAATCATGGAGGCCAGCAAGAAAATCCCATTaGAGGCACACTGGGAGTAAG +
Preference number: 4 (lower is better)
Translates to: FPHVVGGTQWEVIESWRPARKSH*RHTGSK
Trigger: CTTACTCCCAGTGTGCCTTCAATGGGATTTTCTTGC...TGGCCTCCATGATTCAATTACCTCCCACTGCGTCCCTCCCACAACATGTGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR TCA 90 bp GCTTCAGTAAAAGCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACGCAAGAAAATCCCATTaGAGGCACACTGGGAGTAAG +
Preference number: 4 (lower is better)
Translates to: ASVKAKEASHSSRLALADARKSH*RHTGSK
Trigger: CTTACTCCCAGTGTGCCTTCAATGGGATTTTCTTGC...GTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGCTTTTACTGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR TCA 90 bp AGTAAAAGCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGGAATCTCCTCCCAAGGCTaGGCACAGAACTTTTTCATC +
Preference number: 4 (lower is better)
Translates to: SKSQGSFTLVKTGPGRQGISSQG*AQNFFI
Trigger: GATGAAAAAGTTCTGTGCTCAGCCTTGGGAGGAGAT...TCCCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGCTTTTACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR TCA 90 bp TCAGTAAAAGCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGATCTCCTCCCAAGGCTaGGCACAGAACTTTTTCATC +
Preference number: 4 (lower is better)
Translates to: SVKAKEASHSSRLALADRISSQG*AQNFFI
Trigger: GATGAAAAAGTTCTGTGCTCAGCCTTGGGAGGAGAT...CCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGCTTTTACTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR TCA 90 bp ACTTGCAACCTGAATGTCCTTGGCCAGTTTCTGCCAGAGTGCCTGATCCTTCCCCCCAGGAATCAGCTGTaGAATGATAGCCTTGCAGAA +
Preference number: 4 (lower is better)
Translates to: TCNLNVLGQFLPECLILPPRNQL*NDSLAE
Trigger: TTCTGCAAGGCTATCATTTCACAGCTGATTCCTGGG...GGGAAGGATCAGGCACTCTGGCAGAAACTGGCCAAGGACATTCAGGTTGCAAGT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000635076.1
ENST00000639992.1
CDS-3UTR TCA 90 bp GGGTGCAGGGTCTCTTCATGTTTCCATGGTAAGGTCTATAGCTGCTGCTTCATGCCTGGATCTTGCCAATaGAATGGATGTGCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: GCRVSSCFHGKVYSCCFMPGSCQ*NGCAPR
Trigger: CCTGGGAGCACATCCATTTCATTGGCAAGATCCAGG...CATGAAGCAGCAGCTATAGACCTTACCATGGAAACATGAAGAGACCCTGCACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR TCA 90 bp AGTAAAAGCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGGAGGGAGAATAGAACCATaGGGAAGACATAGGTGGAGT +
Preference number: 4 (lower is better)
Translates to: SKSQGSFTLVKTGPGRQGGRIEP*GRHRWS
Trigger: ACTCCACCTATGTCTTCCTCATGGTTCTATTCTCCC...TCCCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGCTTTTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR TCA 90 bp TTTCCCCATCAGCTCAACAGTCAGTCCCCAGATCTAGAGATGGAGAGCTTGGGAGGCTTCCGGTTTGTGTaGGAGCTTTTCTTTCCCCAT +
Preference number: 4 (lower is better)
Translates to: FPHQLNSQSPDLEMESLGGFRFV*ELFFPH
Trigger: ATGGGGAAAGAAAAGCTCTCACACAAACCGGAAGCC...TCCCAAGCTCTCCATCTCTAGATCTGGGGACTGACTGTTGAGCTGATGGGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR TCA 90 bp TCAGTAAAAGCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGCTGCCTCCCTTTCTATaGATACCAAGTCCCATGAAC +
Preference number: 4 (lower is better)
Translates to: SVKAKEASHSSRLALADRLPPFL*IPSPMN
Trigger: GTTCATGGGACTTGGTATTCATAGAAAGGGAGGCAG...CCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGCTTTTACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR TCA 90 bp TCAGTAAAAGCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGCTGCGGGGTTCATCATaGGAACATATCCCTAGAAAC +
Preference number: 4 (lower is better)
Translates to: SVKAKEASHSSRLALADRLRGSS*EHIPRN
Trigger: GTTTCTAGGGATATGTTCTCATGATGAACCCCGCAG...CCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGCTTTTACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR TCA 90 bp AGTAAAAGCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGGAGCTGCCACAGCATCCTaGTTAAGGCTATGGAAAGAA +
Preference number: 4 (lower is better)
Translates to: SKSQGSFTLVKTGPGRQGAATAS*LRLWKE
Trigger: TTCTTTCCATAGCCTTAATCAGGATGCTGTGGCAGC...TCCCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGCTTTTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR TCA 90 bp CAGACAGGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCCTGGACTCCTCATTTTGCTCTTaGTGCCACCACGTAAGAAGT +
Preference number: 4 (lower is better)
Translates to: QTGKDGLEHCDGGKCSLDSSFCS*CHHVRS
Trigger: ACTTCTTACGTGGTGGCATCAAGAGCAAAATGAGGA...GTCCAGGGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTGTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR GCA 90 bp CAGACAGGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCCTGGACAACGTTTTCTGGCAATaGTTTGTTCTGGGTCAACCC +
Preference number: 4 (lower is better)
Translates to: QTGKDGLEHCDGGKCSLDNVFWQ*FVLGQP
Trigger: GGGTTGACCCAGAACAAAGCATTGCCAGAAAACGTT...GTCCAGGGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTGTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR GCA 90 bp CTTGAGCACACAGCGTGGTACACCACAAATGCTCAACCAACAGCAGCGATGACACAGTTTCTGCCAGAGTaGCTGATCCTTCCCATAGCA +
Preference number: 4 (lower is better)
Translates to: LEHTAWYTTNAQPTAAMTQFLPE*LILPIA
Trigger: TGCTATGGGAAGGATCAGGCACTCTGGCAGAAACTG...TGTCATCGCTGCTGTTGGTTGAGCATTTGTGGTGTACCACGCTGTGTGCTCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR GCA 90 bp GAATGTCCTTGGCCAGTTTCTGCCAGAGTGCCTGATCCTTCCCATAGCACAAGACAGTTTCTGCCAGAGTaGCTGATCCTTCCCATAGCA +
Preference number: 4 (lower is better)
Translates to: ECPWPVSARVPDPSHSTRQFLPE*LILPIA
Trigger: TGCTATGGGAAGGATCAGGCACTCTGGCAGAAACTG...TCTTGTGCTATGGGAAGGATCAGGCACTCTGGCAGAAACTGGCCAAGGACATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000483213.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR GCA 90 bp GCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGGAAGGATGGGAGAATTTCATTACTTaGAACCTGAATGTCCTTGGC +
Preference number: 4 (lower is better)
Translates to: AKEASHSSRLALADREGWENFIT*NLNVLG
Trigger: GCCAAGGACATTCAGGTTGCAAGTAATGAAATTCTC...CCATCCTTCCCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR GCA 90 bp CAGACAGGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCCTGGACTCTCAAATCTCTTGGTaGAGGGGGTCTTGTAAAGGT +
Preference number: 4 (lower is better)
Translates to: QTGKDGLEHCDGGKCSLDSQISW*RGSCKG
Trigger: ACCTTTACAAGACCCCCTGCACCAAGAGATTTGAGA...GTCCAGGGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTGTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR GCA 90 bp AGTAAAAGCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGGACCAATGAAATGGATGTaGTCCCAGGAATCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: SKSQGSFTLVKTGPGRQGPMKWM*SQESAV
Trigger: CACAGCTGATTCCTGGGAGCACATCCATTTCATTGG...TCCCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGCTTTTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR GCA 90 bp GCTTCAGTAAAAGCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACCCAATGAAATGGATGTaGTCCCAGGAATCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: ASVKAKEASHSSRLALADPMKWM*SQESAV
Trigger: CACAGCTGATTCCTGGGAGCACATCCATTTCATTGG...GTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGCTTTTACTGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR GCA 90 bp ACTTGCAACCTGAATGTCCTTGGCCAGTTTCTGCCAGAGTGCCTGATCCTTCCCCCAATGAAATGGATGTaGTCCCAGGAATCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: TCNLNVLGQFLPECLILPPMKWM*SQESAV
Trigger: CACAGCTGATTCCTGGGAGCACATCCATTTCATTGG...GGGAAGGATCAGGCACTCTGGCAGAAACTGGCCAAGGACATTCAGGTTGCAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635076.1
ENST00000639992.1
CDS-3UTR GCA 90 bp TACTTGCAACCTGAATGTCCTTGGCCAGTTTCTGCCAGAGTGCCTGATCCTTCCGATGGCCTTGAACACTaGGATGGAGGAAAATGCTCC +
Preference number: 4 (lower is better)
Translates to: YLQPECPWPVSARVPDPSDGLEH*DGGKCS
Trigger: GGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATC...GGAAGGATCAGGCACTCTGGCAGAAACTGGCCAAGGACATTCAGGTTGCAAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635076.1
ENST00000639992.1
CDS-3UTR GCA 90 bp ACAGGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCCTGGACGATGGTATGCCTATAGATTaGAGAACCGAGGAGAAAGGG +
Preference number: 4 (lower is better)
Translates to: TGKDGLEHCDGGKCSLDDGMPID*RTEEKG
Trigger: CCCTTTCTCCTCGGTTCTGCAATCTATAGGCATACC...ATCGTCCAGGGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR CCA 90 bp TCAGTAAAAGCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGAGGAGAAGCCAAGGATaGCTAGGATATTCTTGGAGC +
Preference number: 4 (lower is better)
Translates to: SVKAKEASHSSRLALADRRRSQG*LGYSWS
Trigger: GCTCCAAGAATATCCTAGCCATCCTTGGCTTCTCCT...CCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGCTTTTACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CCA 90 bp CAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGGAAGGATGGCCTCGATAGTCTGGTTTTaGGGTACAAAAGTGACTTGT +
Preference number: 4 (lower is better)
Translates to: QGSFTLVKTGPGRQGRMASIVWF*GTKVTC
Trigger: ACAAGTCACTTTTGTACCCCAAAACCAGACTATCGA...GGCCATCCTTCCCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CCA 90 bp GCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGGAAGGATGGTCGATAGTCTGGTTTTaGGGTACAAAAGTGACTTGT +
Preference number: 4 (lower is better)
Translates to: AKEASHSSRLALADREGWSIVWF*GTKVTC
Trigger: ACAAGTCACTTTTGTACCCCAAAACCAGACTATCGA...CCATCCTTCCCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CCA 90 bp TGGCAGACAGGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCCTGTTGCAGAGCATTATCTaGGGACTCGATAGTCTGGTT +
Preference number: 4 (lower is better)
Translates to: WQTGKDGLEHCDGGKCSLLQSII*GLDSLV
Trigger: AACCAGACTATCGAGTCCCCAGATAATGCTCTGCAA...CAGGGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTGTCTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CCA 90 bp CAGACAGGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCCTGGACTTGCAGAGCATTATCTaGGGACTCGATAGTCTGGTT +
Preference number: 4 (lower is better)
Translates to: QTGKDGLEHCDGGKCSLDLQSII*GLDSLV
Trigger: AACCAGACTATCGAGTCCCCAGATAATGCTCTGCAA...GTCCAGGGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTGTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CCA 90 bp TTTCCCCATCAGCTCAACAGTCAGTCCCCAGATCTAGAGATGGAGAGCTTGGGACAACCTGAATGTCCTTaGCCAGTTTCTGCCAGAGTG +
Preference number: 4 (lower is better)
Translates to: FPHQLNSQSPDLEMESLGQPECP*PVSARV
Trigger: CACTCTGGCAGAAACTGGCCAAGGACATTCAGGTTG...TCCCAAGCTCTCCATCTCTAGATCTGGGGACTGACTGTTGAGCTGATGGGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR CCA 90 bp CCCTGGCAGACAGGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCTCATCTCAAATCTCTTaGTGCAGGGGGTCTTGTAAA +
Preference number: 4 (lower is better)
Translates to: PWQTGKDGLEHCDGGKCSSSQIS*CRGSCK
Trigger: TTTACAAGACCCCCTGCACCAAGAGATTTGAGATGA...GGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTGTCTGCCAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CCA 90 bp CCTGGCAGACAGGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCCATCTTGCCAATGAAATaGATGTGCTCCCAGGAATCA +
Preference number: 4 (lower is better)
Translates to: PGRQGRMALNTAMEENAPILPMK*MCSQES
Trigger: TGATTCCTGGGAGCACATCCATTTCATTGGCAAGAT...GGGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTGTCTGCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CCA 90 bp GGGTGCAGGGTCTCTTCATGTTTCCATGGTAAGGTCTATAGCTGCTGCTTCATGAGTGGGAGAGAGGTGTaGACAATGGTTGCTCAGCTG +
Preference number: 4 (lower is better)
Translates to: GCRVSSCFHGKVYSCCFMSGREV*TMVAQL
Trigger: CAGCTGAGCAACCATTGTCCACACCTCTCTCCCACT...CATGAAGCAGCAGCTATAGACCTTACCATGGAAACATGAAGAGACCCTGCACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR CCA 90 bp GTATCTGCCGAAGTCCTTGAGGCAAAGGATATTGAATACCTCCAAAAGAAAGGCCGTCAAGACTGGCCCTaGCAGACAGGGAAGGATGGC +
Preference number: 4 (lower is better)
Translates to: VSAEVLEAKDIEYLQKKGRQDWP*QTGKDG
Trigger: GCCATCCTTCCCTGTCTGCCAGGGCCAGTCTTGACG...GCCTTTCTTTTGGAGGTATTCAATATCCTTTGCCTCAAGGACTTCGGCAGATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CCA 90 bp AGCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGGAAGGATGCCACTCTGTAGCATTTaGGTATCACCTAGGAATATG +
Preference number: 4 (lower is better)
Translates to: SQGSFTLVKTGPGRQGRMPLCSI*VSPRNM
Trigger: CATATTCCTAGGTGATACCCAAATGCTACAGAGTGG...CATCCTTCCCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR CCA 90 bp CCCTGGCAGACAGGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCTTTGGCTCAGCCATTTaGGCAAATGACTTAACCTCT +
Preference number: 4 (lower is better)
Translates to: PWQTGKDGLEHCDGGKCSFGSAI*ANDLTS
Trigger: AGAGGTTAAGTCATTTGCCCAAATGGCTGAGCCAAA...GGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTGTCTGCCAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR CCA 90 bp GGGTGCAGGGTCTCTTCATGTTTCCATGGTAAGGTCTATAGCTGCTGCTTCATGGTAGAGCTGCCCAGCTaGCTTGCAGACTCACAAACA +
Preference number: 4 (lower is better)
Translates to: GCRVSSCFHGKVYSCCFMVELPS*LADSQT
Trigger: TGTTTGTGAGTCTGCAAGCCAGCTGGGCAGCTCTAC...CATGAAGCAGCAGCTATAGACCTTACCATGGAAACATGAAGAGACCCTGCACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR CCA 90 bp CAGTTCCTGAGATTCTTCTTTCAGCCAGCTCAGCCTCCTATCACAGGACTCAAGATTGCACAGGCAGAATaGGGAGGTCCCAGTGATGGA +
Preference number: 4 (lower is better)
Translates to: QFLRFFFQPAQPPITGLKIAQAE*GGPSDG
Trigger: TCCATCACTGGGACCTCCCCATTCTGCCTGTGCAAT...CTTGAGTCCTGTGATAGGAGGCTGAGCTGGCTGAAAGAAGAATCTCAGGAACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR CCA 90 bp CAGACAGGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCCTGGACAGAAGACAACCTGAGTaGTGTTGGGTGAACAGTCAT +
Preference number: 4 (lower is better)
Translates to: QTGKDGLEHCDGGKCSLDRRQPE*CWVNSH
Trigger: ATGACTGTTCACCCAACACCACTCAGGTTGTCTTCT...GTCCAGGGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTGTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR CCA 90 bp AAAGCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGGAAGGATACCTGGCAGCTTGTTaGAAATGTAAAACCTCAGGC +
Preference number: 4 (lower is better)
Translates to: KAKEASHSSRLALADREGYLAAC*KCKTSG
Trigger: GCCTGAGGTTTTACATTTCCAACAAGCTGCCAGGTA...TCCTTCCCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR CCA 90 bp TCAGTAAAAGCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGAGGATGCGTGTGAGCTaGCATAACCTACCTACTCTT +
Preference number: 4 (lower is better)
Translates to: SVKAKEASHSSRLALADRRMRVS*HNLPTL
Trigger: AAGAGTAGGTAGGTTATGCCAGCTCACACGCATCCT...CCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGCTTTTACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR TCA 90 bp CAGGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCCTGGACGATTAACCACCTTGTTTTCTaGCTGAATTTGCCCAGCAGA +
Preference number: 4 (lower is better)
Translates to: QGRMALNTAMEENAPWTINHLVF*LNLPSR
Trigger: TCTGCTGGGCAAATTCAGTCAGAAAACAAGGTGGTT...AATCGTCCAGGGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR TCA 90 bp GCTTCAGTAAAAGCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACCATATGGGACTATGCTaGACCACCTTGTTTTCTGAC +
Preference number: 4 (lower is better)
Translates to: ASVKAKEASHSSRLALADHMGLC*TTLFSD
Trigger: GTCAGAAAACAAGGTGGTTCAGCATAGTCCCATATG...GTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGCTTTTACTGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR TCA 90 bp TGGCAGACAGGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCCTGGCTCCAAAGGTTTCCTaGTTATTGGTTTCATATGGG +
Preference number: 4 (lower is better)
Translates to: WQTGKDGLEHCDGGKCSLAPKVS*LLVSYG
Trigger: CCCATATGAAACCAATAATCAGGAAACCTTTGGAGC...CAGGGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTGTCTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR TCA 90 bp AAAGCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGGAAGGAGAAAGCATGGGTCCCTaGGAATTTCATTACTTGCAA +
Preference number: 4 (lower is better)
Translates to: KAKEASHSSRLALADREGESMGP*EFHYLQ
Trigger: TTGCAAGTAATGAAATTCTCAGGGACCCATGCTTTC...TCCTTCCCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR TCA 90 bp TACTTGCAACCTGAATGTCCTTGGCCAGTTTCTGCCAGAGTGCCTGATCCTTCCGCAAGAAAATCCCATTaGAGGCACACTGGGAGTAAG +
Preference number: 4 (lower is better)
Translates to: YLQPECPWPVSARVPDPSARKSH*RHTGSK
Trigger: CTTACTCCCAGTGTGCCTTCAATGGGATTTTCTTGC...GGAAGGATCAGGCACTCTGGCAGAAACTGGCCAAGGACATTCAGGTTGCAAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635076.1
ENST00000639992.1
CDS-3UTR TCA 90 bp ACAGGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCCTGGACGATTCAGTCACCTTTTCCTaGGAGACTTTCTCTGATGTC +
Preference number: 4 (lower is better)
Translates to: TGKDGLEHCDGGKCSLDDSVTFS*ETFSDV
Trigger: GACATCAGAGAAAGTCTCTCAGGAAAAGGTGACTGA...ATCGTCCAGGGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR TCA 90 bp AGTAAAAGCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGGATCAGTCACCTTTTCCTaGGAGACTTTCTCTGATGTC +
Preference number: 4 (lower is better)
Translates to: SKSQGSFTLVKTGPGRQGSVTFS*ETFSDV
Trigger: GACATCAGAGAAAGTCTCTCAGGAAAAGGTGACTGA...TCCCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGCTTTTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR TCA 90 bp CTTGAGCACACAGCGTGGTACACCACAAATGCTCAACCAACAGCAGCGATGACACCCAGGAATCAGCTGTaGAATGATAGCCTTGCAGAA +
Preference number: 4 (lower is better)
Translates to: LEHTAWYTTNAQPTAAMTPRNQL*NDSLAE
Trigger: TTCTGCAAGGCTATCATTTCACAGCTGATTCCTGGG...TGTCATCGCTGCTGTTGGTTGAGCATTTGTGGTGTACCACGCTGTGTGCTCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR TCA 90 bp GAATGTCCTTGGCCAGTTTCTGCCAGAGTGCCTGATCCTTCCCATAGCACAAGAGGGAGAATAGAACCATaGGGAAGACATAGGTGGAGT +
Preference number: 4 (lower is better)
Translates to: ECPWPVSARVPDPSHSTRGRIEP*GRHRWS
Trigger: ACTCCACCTATGTCTTCCTCATGGTTCTATTCTCCC...TCTTGTGCTATGGGAAGGATCAGGCACTCTGGCAGAAACTGGCCAAGGACATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635076.1
ENST00000639992.1
CDS-3UTR TCA 90 bp CAGTTCCTGAGATTCTTCTTTCAGCCAGCTCAGCCTCCTATCACAGGACTCAAGAAAGCCCATGTTGTGTaGCGGGTGGCAACACTTTCA +
Preference number: 4 (lower is better)
Translates to: QFLRFFFQPAQPPITGLKKAHVV*RVATLS
Trigger: TGAAAGTGTTGCCACCCGTCACACAACATGGGCTTT...CTTGAGTCCTGTGATAGGAGGCTGAGCTGGCTGAAAGAAGAATCTCAGGAACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR TCA 90 bp CTTGAGCACACAGCGTGGTACACCACAAATGCTCAACCAACAGCAGCGATGACAGGGACAAGGTCAGAATaGAACATCACCAGTCAATCC +
Preference number: 4 (lower is better)
Translates to: LEHTAWYTTNAQPTAAMTGTRSE*NITSQS
Trigger: GGATTGACTGGTGATGTTTCATTCTGACCTTGTCCC...TGTCATCGCTGCTGTTGGTTGAGCATTTGTGGTGTACCACGCTGTGTGCTCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR TCA 90 bp TTCCCACATGTTGTGGGAGGGACGCAGTGGGAGGTAATTGAATCATGGAGGCCAAGCAGAACCAAGTTTTaGGTCCTGGGTGAAAATCCA +
Preference number: 4 (lower is better)
Translates to: FPHVVGGTQWEVIESWRPSRTKF*VLGENP
Trigger: TGGATTTTCACCCAGGACTCAAAACTTGGTTCTGCT...TGGCCTCCATGATTCAATTACCTCCCACTGCGTCCCTCCCACAACATGTGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR TCA 90 bp GCTTCAGTAAAAGCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGCAGAACCAAGTTTTaGGTCCTGGGTGAAAATCCA +
Preference number: 4 (lower is better)
Translates to: ASVKAKEASHSSRLALADSRTKF*VLGENP
Trigger: TGGATTTTCACCCAGGACTCAAAACTTGGTTCTGCT...GTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGCTTTTACTGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR TCA 90 bp GCTTCAGTAAAAGCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACGAAGGCAACAAAACCTaGGGAATACAACCTAGGATC +
Preference number: 4 (lower is better)
Translates to: ASVKAKEASHSSRLALADEGNKT*GIQPRI
Trigger: GATCCTAGGTTGTATTCCTCAGGTTTTGTTGCCTTC...GTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGCTTTTACTGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR TCA 90 bp GACTTGCATGGACCCTGTAACCCCTTTGTTTTGGCCAATTTCTCTCATTTGGAATCCACCCTTACCACCTaGAGTAGAGCTGCCCAGCTG +
Preference number: 4 (lower is better)
Translates to: DLHGPCNPFVLANFSHLESTLTT*SRAAQL
Trigger: CAGCTGGGCAGCTCTACTTCAGGTGGTAAGGGTGGA...TTCCAAATGAGAGAAATTGGCCAAAACAAAGGGGTTACAGGGTCCATGCAAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR TCA 90 bp TCAGTAAAAGCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGGCGCAGTGCTCTTCATaGAGTCTGAATCTTGTTTCA +
Preference number: 4 (lower is better)
Translates to: SVKAKEASHSSRLALADRAQCSS*SLNLVS
Trigger: TGAAACAAGATTCAGACTTCATGAAGAGCACTGCGC...CCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGCTTTTACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR GCA 90 bp CAGGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCCTGGACGATTAACGTTTTCTGGCAATaGTTTGTTCTGGGTCAACCC +
Preference number: 4 (lower is better)
Translates to: QGRMALNTAMEENAPWTINVFWQ*FVLGQP
Trigger: GGGTTGACCCAGAACAAAGCATTGCCAGAAAACGTT...AATCGTCCAGGGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR GCA 90 bp AGCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGGAAGGATGGTCATTCTCCTTTTCTaGTGGCCACTTATAGATGTA +
Preference number: 4 (lower is better)
Translates to: SQGSFTLVKTGPGRQGRMVILLF*WPLIDV
Trigger: TACATCTATAAGTGGCCAGCAGAAAAGGAGAATGAC...CATCCTTCCCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000639992.1
CDS-3UTR GCA 90 bp CCCTGGCAGACAGGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCGTCATTCTCCTTTTCTaGTGGCCACTTATAGATGTA +
Preference number: 4 (lower is better)
Translates to: PWQTGKDGLEHCDGGKCSVILLF*WPLIDV
Trigger: TACATCTATAAGTGGCCAGCAGAAAAGGAGAATGAC...GGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTGTCTGCCAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000639992.1
CDS-3UTR GCA 90 bp AATCCCATTGAAGGCACACTGGGAGTAAGGGCAGTAACTGGTGTTGAAGAGCTCCAGTTTCTGCCAGAGTaGCTGATCCTTCCCATAGCA +
Preference number: 4 (lower is better)
Translates to: NPIEGTLGVRAVTGVEELQFLPE*LILPIA
Trigger: TGCTATGGGAAGGATCAGGCACTCTGGCAGAAACTG...GAGCTCTTCAACACCAGTTACTGCCCTTACTCCCAGTGTGCCTTCAATGGGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635076.1
ENST00000639992.1
CDS-3UTR GCA 90 bp AGCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGGAAGGATGGAGAATTTCATTACTTaGAACCTGAATGTCCTTGGC +
Preference number: 4 (lower is better)
Translates to: SQGSFTLVKTGPGRQGRMENFIT*NLNVLG
Trigger: GCCAAGGACATTCAGGTTGCAAGTAATGAAATTCTC...CATCCTTCCCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR GCA 90 bp GCTTCAGTAAAAGCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACTCTCAAATCTCTTGGTaGAGGGGGTCTTGTAAAGGT +
Preference number: 4 (lower is better)
Translates to: ASVKAKEASHSSRLALADSQISW*RGSCKG
Trigger: ACCTTTACAAGACCCCCTGCACCAAGAGATTTGAGA...GTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGCTTTTACTGAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR GCA 90 bp AGCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGGAAGGATGGGAGTTTTAAGTGCATaGTTGGAAGTTATGAGGAGA +
Preference number: 4 (lower is better)
Translates to: SQGSFTLVKTGPGRQGRMGVLSA*LEVMRR
Trigger: TCTCCTCATAACTTCCAAGCATGCACTTAAAACTCC...CATCCTTCCCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR GCA 90 bp TGGCAGACAGGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCCTGTTGGAGTATCTGCTCTaGCATGTAGTAGTTTGTGTG +
Preference number: 4 (lower is better)
Translates to: WQTGKDGLEHCDGGKCSLLEYLL*HVVVCV
Trigger: CACACAAACTACTACATGGCAGAGCAGATACTCCAA...CAGGGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTGTCTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR GCA 90 bp AGTAAAAGCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGGATCTACCAGTTTAGAATaGGAGGCTAATGTGGGAGCT +
Preference number: 4 (lower is better)
Translates to: SKSQGSFTLVKTGPGRQGSTSLE*EANVGA
Trigger: AGCTCCCACATTAGCCTCGCATTCTAAACTGGTAGA...TCCCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGCTTTTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR GCA 90 bp AGACAGTATCTGCCGAAGTCCTTGAGGCAAAGGATATTGAATACCTCCAAAAGAAGCCTAGGGACTTGGTaGCCTGTGTCCCAGCTGCTC +
Preference number: 4 (lower is better)
Translates to: RQYLPKSLRQRILNTSKRSLGTW*PVSQLL
Trigger: GAGCAGCTGGGACACAGGGCACCAAGTCCCTAGGCT...TCTTTTGGAGGTATTCAATATCCTTTGCCTCAAGGACTTCGGCAGATACTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR CCA 90 bp GCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGGAAGGATGGATTATTGGTTTCATATaGGACTATGCTGAACCACCT +
Preference number: 4 (lower is better)
Translates to: AKEASHSSRLALADREGWIIGFI*DYAEPP
Trigger: AGGTGGTTCAGCATAGTCCCATATGAAACCAATAAT...CCATCCTTCCCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CCA 90 bp AATGTCCTTGGCCAGTTTCTGCCAGAGTGCCTGATCCTTCCCATAGCACAAGAACAACCTGAATGTCCTTaGCCAGTTTCTGCCAGAGTG +
Preference number: 4 (lower is better)
Translates to: NVLGQFLPECLILPIAQEQPECP*PVSARV
Trigger: CACTCTGGCAGAAACTGGCCAAGGACATTCAGGTTG...TTCTTGTGCTATGGGAAGGATCAGGCACTCTGGCAGAAACTGGCCAAGGACATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000483213.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CCA 90 bp TGGCAGACAGGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCCTGTCATCTCAAATCTCTTaGTGCAGGGGGTCTTGTAAA +
Preference number: 4 (lower is better)
Translates to: WQTGKDGLEHCDGGKCSLSSQIS*CRGSCK
Trigger: TTTACAAGACCCCCTGCACCAAGAGATTTGAGATGA...CAGGGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTGTCTGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CCA 90 bp CAGACAGGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCCTGGACATCTTGCCAATGAAATaGATGTGCTCCCAGGAATCA +
Preference number: 4 (lower is better)
Translates to: QTGKDGLEHCDGGKCSLDILPMK*MCSQES
Trigger: TGATTCCTGGGAGCACATCCATTTCATTGGCAAGAT...GTCCAGGGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTGTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CCA 90 bp AAAGCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGGAAGGAATCTTGCCAATGAAATaGATGTGCTCCCAGGAATCA +
Preference number: 4 (lower is better)
Translates to: KAKEASHSSRLALADREGILPMK*MCSQES
Trigger: TGATTCCTGGGAGCACATCCATTTCATTGGCAAGAT...TCCTTCCCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CCA 90 bp AGACAGTATCTGCCGAAGTCCTTGAGGCAAAGGATATTGAATACCTCCAAAAGACGTCAAGACTGGCCCTaGCAGACAGGGAAGGATGGC +
Preference number: 4 (lower is better)
Translates to: RQYLPKSLRQRILNTSKRRQDWP*QTGKDG
Trigger: GCCATCCTTCCCTGTCTGCCAGGGCCAGTCTTGACG...TCTTTTGGAGGTATTCAATATCCTTTGCCTCAAGGACTTCGGCAGATACTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CCA 90 bp CTTGAGCACACAGCGTGGTACACCACAAATGCTCAACCAACAGCAGCGATGACAGAGATAGGGGACATTTaGCTTCCGGTTTGTGTGAGA +
Preference number: 4 (lower is better)
Translates to: LEHTAWYTTNAQPTAAMTEIGDI*LPVCVR
Trigger: TCTCACACAAACCGGAAGCCAAATGTCCCCTATCTC...TGTCATCGCTGCTGTTGGTTGAGCATTTGTGGTGTACCACGCTGTGTGCTCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR CCA 90 bp ACAGGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCCTGGACGATAACCAGGAGTTGGGCTaGTTCTTAAAACCTGGAGAA +
Preference number: 4 (lower is better)
Translates to: TGKDGLEHCDGGKCSLDDNQELG*FLKPGE
Trigger: TTCTCCAGGTTTTAAGAACCAGCCCAACTCCTGGTT...ATCGTCCAGGGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR CCA 90 bp CCCTGGCAGACAGGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCATAGTACCAGTAGAGTaGGGCATTGCTGAAAAGATA +
Preference number: 4 (lower is better)
Translates to: PWQTGKDGLEHCDGGKCSIVPVE*GIAEKI
Trigger: TATCTTTTCAGCAATGCCCCACTCTACTGGTACTAT...GGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTGTCTGCCAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR CCA 90 bp CAGACAGGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCCTGGACTTTCTGTTATTAGAATaGCCTGTCCAGAAGACAGCC +
Preference number: 4 (lower is better)
Translates to: QTGKDGLEHCDGGKCSLDFLLLE*PVQKTA
Trigger: GGCTGTCTTCTGGACAGGCCATTCTAATAACAGAAA...GTCCAGGGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTGTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR TCA 90 bp AACCTGAATGTCCTTGGCCAGTTTCTGCCAGAGTGCCTGATCCTTCCCATAGCAATGTATAAACTTGTGTaGGAAGAACCCGCATCCAGC +
Preference number: 4 (lower is better)
Translates to: NLNVLGQFLPECLILPIAMYKLV*EEPASS
Trigger: GCTGGATGCGGGTTCTTCTCACACAAGTTTATACAT...TGCTATGGGAAGGATCAGGCACTCTGGCAGAAACTGGCCAAGGACATTCAGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483213.6
ENST00000639992.1
CDS-3UTR TCA 90 bp AGACAGTATCTGCCGAAGTCCTTGAGGCAAAGGATATTGAATACCTCCAAAAGACTTCACTTTCCATCCTaGGCAACCGCATGCCTGCCG +
Preference number: 4 (lower is better)
Translates to: RQYLPKSLRQRILNTSKRLHFPS*ATACLP
Trigger: CGGCAGGCATGCGGTTGCTCAGGATGGAAAGTGAAG...TCTTTTGGAGGTATTCAATATCCTTTGCCTCAAGGACTTCGGCAGATACTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
CDS-3UTR TCA 90 bp GTATCTGCCGAAGTCCTTGAGGCAAAGGATATTGAATACCTCCAAAAGAAAGGCCAAAGGGGTAGTTGCTaGGGCTCCTCTCCACCACAT +
Preference number: 4 (lower is better)
Translates to: VSAEVLEAKDIEYLQKKGQRGSC*GSSPPH
Trigger: ATGTGGTGGAGAGGAGCCTCAGCAACTACCCCTTTG...GCCTTTCTTTTGGAGGTATTCAATATCCTTTGCCTCAAGGACTTCGGCAGATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR TCA 90 bp AGTAAAAGCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGGAACCTTGTTTTCTGACTaGATTTGCCCAGCAGATAGT +
Preference number: 4 (lower is better)
Translates to: SKSQGSFTLVKTGPGRQGTLFSD*ICPADS
Trigger: ACTATCTGCTGGGCAAATTCAGTCAGAAAACAAGGT...TCCCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGCTTTTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR TCA 90 bp TCAGTAAAAGCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGACCTTGTTTTCTGACTaGATTTGCCCAGCAGATAGT +
Preference number: 4 (lower is better)
Translates to: SVKAKEASHSSRLALADRTLFSD*ICPADS
Trigger: ACTATCTGCTGGGCAAATTCAGTCAGAAAACAAGGT...CCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGCTTTTACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR TCA 90 bp GAATGTCCTTGGCCAGTTTCTGCCAGAGTGCCTGATCCTTCCCATAGCACAAGAAACCACCTTGTTTTCTaGCTGAATTTGCCCAGCAGA +
Preference number: 4 (lower is better)
Translates to: ECPWPVSARVPDPSHSTRNHLVF*LNLPSR
Trigger: TCTGCTGGGCAAATTCAGTCAGAAAACAAGGTGGTT...TCTTGTGCTATGGGAAGGATCAGGCACTCTGGCAGAAACTGGCCAAGGACATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000483213.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR TCA 90 bp TTCCCACATGTTGTGGGAGGGACGCAGTGGGAGGTAATTGAATCATGGAGGCCAGCTCCAAAGGTTTCCTaGTTATTGGTTTCATATGGG +
Preference number: 4 (lower is better)
Translates to: FPHVVGGTQWEVIESWRPAPKVS*LLVSYG
Trigger: CCCATATGAAACCAATAATCAGGAAACCTTTGGAGC...TGGCCTCCATGATTCAATTACCTCCCACTGCGTCCCTCCCACAACATGTGGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR TCA 90 bp TCAGTAAAAGCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGGCTCCAAAGGTTTCCTaGTTATTGGTTTCATATGGG +
Preference number: 4 (lower is better)
Translates to: SVKAKEASHSSRLALADRAPKVS*LLVSYG
Trigger: CCCATATGAAACCAATAATCAGGAAACCTTTGGAGC...CCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGCTTTTACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR TCA 90 bp GCTTCAGTAAAAGCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACGCTCCAAAGGTTTCCTaGTTATTGGTTTCATATGGG +
Preference number: 4 (lower is better)
Translates to: ASVKAKEASHSSRLALADAPKVS*LLVSYG
Trigger: CCCATATGAAACCAATAATCAGGAAACCTTTGGAGC...GTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGCTTTTACTGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR TCA 90 bp CAGTTCCTGAGATTCTTCTTTCAGCCAGCTCAGCCTCCTATCACAGGACTCAAGGGGAGAATAGAACCATaGGGAAGACATAGGTGGAGT +
Preference number: 4 (lower is better)
Translates to: QFLRFFFQPAQPPITGLKGRIEP*GRHRWS
Trigger: ACTCCACCTATGTCTTCCTCATGGTTCTATTCTCCC...CTTGAGTCCTGTGATAGGAGGCTGAGCTGGCTGAAAGAAGAATCTCAGGAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR TCA 90 bp AGCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGGAAGGATGTCACCTAGGAATATGTaGTTTATTGACATACCTGCT +
Preference number: 4 (lower is better)
Translates to: SQGSFTLVKTGPGRQGRMSPRNM*FIDIPA
Trigger: AGCAGGTATGTCAATAAATCACATATTCCTAGGTGA...CATCCTTCCCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR TCA 90 bp CCTGGCAGACAGGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCCCCACAAGAAAGAATTTaGACATGTCCCAATTCGAAT +
Preference number: 4 (lower is better)
Translates to: PGRQGRMALNTAMEENAPPQERI*TCPNSN
Trigger: ATTCGAATTGGGACATGTTCAAATTCTTTCTTGTGG...GGGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTGTCTGCCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR TCA 90 bp GGGTGCAGGGTCTCTTCATGTTTCCATGGTAAGGTCTATAGCTGCTGCTTCATGGGGTATGGGAACCACTaGTTAGCATCATATGCCAGA +
Preference number: 4 (lower is better)
Translates to: GCRVSSCFHGKVYSCCFMGYGNH*LASYAR
Trigger: TCTGGCATATGATGCTAATCAGTGGTTCCCATACCC...CATGAAGCAGCAGCTATAGACCTTACCATGGAAACATGAAGAGACCCTGCACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR TCA 90 bp TTCCCACATGTTGTGGGAGGGACGCAGTGGGAGGTAATTGAATCATGGAGGCCATCATCGGCCACTATTTaGTGTCAATCTACTATGCTG +
Preference number: 4 (lower is better)
Translates to: FPHVVGGTQWEVIESWRPSSATI*CQSTML
Trigger: CAGCATAGTAGATTGACATCAAATAGTGGCCGATGA...TGGCCTCCATGATTCAATTACCTCCCACTGCGTCCCTCCCACAACATGTGGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR TCA 90 bp ATCTGCTTTTTGCAAATCTCAGGTCTGAGTGTTCCACTCTGTAGCATTTGGGTAAGGTCGAGGCTGCAGTaGGCCATGATCATGCCACTG +
Preference number: 4 (lower is better)
Translates to: ICFLQISGLSVPLCSIWVRSRLQ*AMIMPL
Trigger: CAGTGGCATGATCATGGCTCACTGCAGCCTCGACCT...TACCCAAATGCTACAGAGTGGAACACTCAGACCTGAGATTTGCAAAAAGCAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR TCA 90 bp AGCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGGAAGGATGTACTGCAGCAATTCATaGAACTTTGAGGCTGTTATA +
Preference number: 4 (lower is better)
Translates to: SQGSFTLVKTGPGRQGRMYCSNS*NFEAVI
Trigger: TATAACAGCCTCAAAGTTTCATGAATTGCTGCAGTA...CATCCTTCCCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR TCA 90 bp CCCTGGCAGACAGGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCAATCTTCACTTCAAATaGAGAGTCTTGAATGCCACT +
Preference number: 4 (lower is better)
Translates to: PWQTGKDGLEHCDGGKCSNLHFK*RVLNAT
Trigger: AGTGGCATTCAAGACTCTTCATTTGAAGTGAAGATT...GGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTGTCTGCCAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR TCA 90 bp CAGACAGGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCCTGGACTTGATACGCAAAGTGTaGTTCCTGGACAGATGTATT +
Preference number: 4 (lower is better)
Translates to: QTGKDGLEHCDGGKCSLDLIRKV*FLDRCI
Trigger: AATACATCTGTCCAGGAATCACACTTTGCGTATCAA...GTCCAGGGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTGTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR TCA 90 bp GCTTCAGTAAAAGCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACGATCTGGTGGGTTTATaGAGAGTTTCTGCTTTTGCT +
Preference number: 4 (lower is better)
Translates to: ASVKAKEASHSSRLALADDLVGL*RVSAFA
Trigger: AGCAAAAGCAGAAACTCTTCATAAACCCACCAGATC...GTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGCTTTTACTGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR TCA 90 bp GACTTGCATGGACCCTGTAACCCCTTTGTTTTGGCCAATTTCTCTCATTTGGAACACTCAACATCAGCCTaGGAAAGCAGCCAGGAGGGA +
Preference number: 4 (lower is better)
Translates to: DLHGPCNPFVLANFSHLEHSTSA*ESSQEG
Trigger: TCCCTCCTGGCTGCTTTCTCAGGCTGATGTTGAGTG...TTCCAAATGAGAGAAATTGGCCAAAACAAAGGGGTTACAGGGTCCATGCAAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR GCA 90 bp TACTTGCAACCTGAATGTCCTTGGCCAGTTTCTGCCAGAGTGCCTGATCCTTCCAACGTTTTCTGGCAATaGTTTGTTCTGGGTCAACCC +
Preference number: 4 (lower is better)
Translates to: YLQPECPWPVSARVPDPSNVFWQ*FVLGQP
Trigger: GGGTTGACCCAGAACAAAGCATTGCCAGAAAACGTT...GGAAGGATCAGGCACTCTGGCAGAAACTGGCCAAGGACATTCAGGTTGCAAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635076.1
ENST00000639992.1
CDS-3UTR GCA 90 bp AGTAAAAGCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGGAAGACATTGTAGTCCTTaGCATAGAGGCGAAATTGCA +
Preference number: 4 (lower is better)
Translates to: SKSQGSFTLVKTGPGRQGRHCSP*HRGEIA
Trigger: TGCAATTTCGCCTCTATGGCAAGGACTACAATGTCT...TCCCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGCTTTTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR GCA 90 bp ACAGGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCCTGGACGATAGACATTGTAGTCCTTaGCATAGAGGCGAAATTGCA +
Preference number: 4 (lower is better)
Translates to: TGKDGLEHCDGGKCSLDDRHCSP*HRGEIA
Trigger: TGCAATTTCGCCTCTATGGCAAGGACTACAATGTCT...ATCGTCCAGGGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR GCA 90 bp CAGACAGGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCCTGGACGAGAATTTCATTACTTaGAACCTGAATGTCCTTGGC +
Preference number: 4 (lower is better)
Translates to: QTGKDGLEHCDGGKCSLDENFIT*NLNVLG
Trigger: GCCAAGGACATTCAGGTTGCAAGTAATGAAATTCTC...GTCCAGGGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTGTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR GCA 90 bp GGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCCTGGACGATTTTATCACCAGTCAATCCTaGTCAACAGGTAACTCTTGC +
Preference number: 4 (lower is better)
Translates to: GKDGLEHCDGGKCSLDDFITSQS*STGNSC
Trigger: GCAAGAGTTACCTGTTGAGCAGGATTGACTGGTGAT...AAAATCGTCCAGGGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR GCA 90 bp GGGTGCAGGGTCTCTTCATGTTTCCATGGTAAGGTCTATAGCTGCTGCTTCATGCTGGCTGCAGAAATTTaGATAAGCAGCAAGGAGCCT +
Preference number: 4 (lower is better)
Translates to: GCRVSSCFHGKVYSCCFMLAAEI*ISSKEP
Trigger: AGGCTCCTTGCTGCTTATGCAAATTTCTGCAGCCAG...CATGAAGCAGCAGCTATAGACCTTACCATGGAAACATGAAGAGACCCTGCACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR GCA 90 bp CAGACAGGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCCTGGACTTTTTCTCTTGCTGCTaGCGTGTAAGAAATGCCTTT +
Preference number: 4 (lower is better)
Translates to: QTGKDGLEHCDGGKCSLDFFSCC*RVRNAF
Trigger: AAAGGCATTTCTTACACGGCAGCAGCAAGAGAAAAA...GTCCAGGGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTGTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR CCA 90 bp CAGTTCCTGAGATTCTTCTTTCAGCCAGCTCAGCCTCCTATCACAGGACTCAAGAGGAGAAGCCAAGGATaGCTAGGATATTCTTGGAGC +
Preference number: 4 (lower is better)
Translates to: QFLRFFFQPAQPPITGLKRRSQG*LGYSWS
Trigger: GCTCCAAGAATATCCTAGCCATCCTTGGCTTCTCCT...CTTGAGTCCTGTGATAGGAGGCTGAGCTGGCTGAAAGAAGAATCTCAGGAACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR CCA 90 bp AATGTCCTTGGCCAGTTTCTGCCAGAGTGCCTGATCCTTCCCATAGCACAAGAAAGGAGAAGCCAAGGATaGCTAGGATATTCTTGGAGC +
Preference number: 4 (lower is better)
Translates to: NVLGQFLPECLILPIAQERRSQG*LGYSWS
Trigger: GCTCCAAGAATATCCTAGCCATCCTTGGCTTCTCCT...TTCTTGTGCTATGGGAAGGATCAGGCACTCTGGCAGAAACTGGCCAAGGACATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CCA 90 bp AGCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGGAAGGATGATTATTGGTTTCATATaGGACTATGCTGAACCACCT +
Preference number: 4 (lower is better)
Translates to: SQGSFTLVKTGPGRQGRMIIGFI*DYAEPP
Trigger: AGGTGGTTCAGCATAGTCCCATATGAAACCAATAAT...CATCCTTCCCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CCA 90 bp AGCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGGAAGGATGAGGTTTCCTGATTATTaGTTTCATATGGGACTATGC +
Preference number: 4 (lower is better)
Translates to: SQGSFTLVKTGPGRQGRMRFPDY*FHMGLC
Trigger: GCATAGTCCCATATGAAACCAATAATCAGGAAACCT...CATCCTTCCCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CCA 90 bp GAATGTCCTTGGCCAGTTTCTGCCAGAGTGCCTGATCCTTCCCATAGCACAAGATTGCAGAGCATTATCTaGGGACTCGATAGTCTGGTT +
Preference number: 4 (lower is better)
Translates to: ECPWPVSARVPDPSHSTRLQSII*GLDSLV
Trigger: AACCAGACTATCGAGTCCCCAGATAATGCTCTGCAA...TCTTGTGCTATGGGAAGGATCAGGCACTCTGGCAGAAACTGGCCAAGGACATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000483213.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CCA 90 bp AACCTGAATGTCCTTGGCCAGTTTCTGCCAGAGTGCCTGATCCTTCCCATAGCATTGCAGAGCATTATCTaGGGACTCGATAGTCTGGTT +
Preference number: 4 (lower is better)
Translates to: NLNVLGQFLPECLILPIALQSII*GLDSLV
Trigger: AACCAGACTATCGAGTCCCCAGATAATGCTCTGCAA...TGCTATGGGAAGGATCAGGCACTCTGGCAGAAACTGGCCAAGGACATTCAGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000483213.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CCA 90 bp TCAAACTGCTGGAATGGAAGAGTCATCTCAAATCTCTTGGTGCAGGGGGTCTTGCAACCTGAATGTCCTTaGCCAGTTTCTGCCAGAGTG +
Preference number: 4 (lower is better)
Translates to: SNCWNGRVISNLLVQGVLQPECP*PVSARV
Trigger: CACTCTGGCAGAAACTGGCCAAGGACATTCAGGTTG...CAAGACCCCCTGCACCAAGAGATTTGAGATGACTCTTCCATTCCAGCAGTTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CCA 90 bp TCAGTAAAAGCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGTCATCTCAAATCTCTTaGTGCAGGGGGTCTTGTAAA +
Preference number: 4 (lower is better)
Translates to: SVKAKEASHSSRLALADRSSQIS*CRGSCK
Trigger: TTTACAAGACCCCCTGCACCAAGAGATTTGAGATGA...CCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGCTTTTACTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CCA 90 bp TGGCAGACAGGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCCTGTGGATTTCAAACTGCTaGAATGGAAGAGTCATCTCA +
Preference number: 4 (lower is better)
Translates to: WQTGKDGLEHCDGGKCSLWISNC*NGRVIS
Trigger: TGAGATGACTCTTCCATTCCAGCAGTTTGAAATCCA...CAGGGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTGTCTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CCA 90 bp ACAGGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCCTGGACGATATCTTGCCAATGAAATaGATGTGCTCCCAGGAATCA +
Preference number: 4 (lower is better)
Translates to: TGKDGLEHCDGGKCSLDDILPMK*MCSQES
Trigger: TGATTCCTGGGAGCACATCCATTTCATTGGCAAGAT...ATCGTCCAGGGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CCA 90 bp AGACAGTATCTGCCGAAGTCCTTGAGGCAAAGGATATTGAATACCTCCAAAAGACCGGCGTCGCTGCCCTaGATCTTGCCAATGAAATGG +
Preference number: 4 (lower is better)
Translates to: RQYLPKSLRQRILNTSKRPASLP*ILPMKW
Trigger: CCATTTCATTGGCAAGATCCAGGGCAGCGACGCCGG...TCTTTTGGAGGTATTCAATATCCTTTGCCTCAAGGACTTCGGCAGATACTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CCA 90 bp CAGTTCCTGAGATTCTTCTTTCAGCCAGCTCAGCCTCCTATCACAGGACTCAAGCAATGGTTGCTCAGCTaGGATCATGTTGGTCAGGTT +
Preference number: 4 (lower is better)
Translates to: QFLRFFFQPAQPPITGLKQWLLS*DHVGQV
Trigger: AACCTGACCAACATGATCCCAGCTGAGCAACCATTG...CTTGAGTCCTGTGATAGGAGGCTGAGCTGGCTGAAAGAAGAATCTCAGGAACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR CCA 90 bp GAGTCATCTCAAATCTCTTGGTGCAGGGGGTCTTGTAAAGGTCACTTACGTTCAAGTGGGAGAGAGGTGTaGACAATGGTTGCTCAGCTG +
Preference number: 4 (lower is better)
Translates to: ESSQISWCRGSCKGHLRSSGREV*TMVAQL
Trigger: CAGCTGAGCAACCATTGTCCACACCTCTCTCCCACT...TGAACGTAAGTGACCTTTACAAGACCCCCTGCACCAAGAGATTTGAGATGACTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CCA 90 bp ATGAAAGAGACAGTATCTGCCGAAGTCCTTGAGGCAAAGGATATTGAATACCTCCACACTCGTCAAGACTaGCCCTGGCAGACAGGGAAG +
Preference number: 4 (lower is better)
Translates to: MKETVSAEVLEAKDIEYLHTRQD*PWQTGK
Trigger: CTTCCCTGTCTGCCAGGGCCAGTCTTGACGAGTGTG...GAGGTATTCAATATCCTTTGCCTCAAGGACTTCGGCAGATACTGTCTCTTTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CCA 90 bp AGACAGTATCTGCCGAAGTCCTTGAGGCAAAGGATATTGAATACCTCCAAAAGACACACTCGTCAAGACTaGCCCTGGCAGACAGGGAAG +
Preference number: 4 (lower is better)
Translates to: RQYLPKSLRQRILNTSKRHTRQD*PWQTGK
Trigger: CTTCCCTGTCTGCCAGGGCCAGTCTTGACGAGTGTG...TCTTTTGGAGGTATTCAATATCCTTTGCCTCAAGGACTTCGGCAGATACTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CCA 90 bp ACTTGCAACCTGAATGTCCTTGGCCAGTTTCTGCCAGAGTGCCTGATCCTTCCCGGAGAAAGGTGTAGCTaGGAAAAACTCATGAAAGAG +
Preference number: 4 (lower is better)
Translates to: TCNLNVLGQFLPECLILPGERCS*EKLMKE
Trigger: CTCTTTCATGAGTTTTTCCCAGCTACACCTTTCTCC...GGGAAGGATCAGGCACTCTGGCAGAAACTGGCCAAGGACATTCAGGTTGCAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CCA 90 bp ACAGGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCCTGGACGATTTGACATACCTGCTTTaGGTGGGATTGAGAACTGTA +
Preference number: 4 (lower is better)
Translates to: TGKDGLEHCDGGKCSLDDLTYLL*VGLRTV
Trigger: TACAGTTCTCAATCCCACCCAAAGCAGGTATGTCAA...ATCGTCCAGGGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR CCA 90 bp AGTAAAAGCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGGACCACTCTGTAGCATTTaGGTATCACCTAGGAATATG +
Preference number: 4 (lower is better)
Translates to: SKSQGSFTLVKTGPGRQGPLCSI*VSPRNM
Trigger: CATATTCCTAGGTGATACCCAAATGCTACAGAGTGG...TCCCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGCTTTTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR CCA 90 bp AGTAAAAGCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGGAATAGCTGCTGCTTCATaGAATAAGCAAACAAAGCCC +
Preference number: 4 (lower is better)
Translates to: SKSQGSFTLVKTGPGRQGIAAAS*NKQTKP
Trigger: GGGCTTTGTTTGCTTATTCCATGAAGCAGCAGCTAT...TCCCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGCTTTTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR CCA 90 bp GGGTGCAGGGTCTCTTCATGTTTCCATGGTAAGGTCTATAGCTGCTGCTTCATGGAGATAGGGGACATTTaGCTTCCGGTTTGTGTGAGA +
Preference number: 4 (lower is better)
Translates to: GCRVSSCFHGKVYSCCFMEIGDI*LPVCVR
Trigger: TCTCACACAAACCGGAAGCCAAATGTCCCCTATCTC...CATGAAGCAGCAGCTATAGACCTTACCATGGAAACATGAAGAGACCCTGCACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR CCA 90 bp ATGAAAGAGACAGTATCTGCCGAAGTCCTTGAGGCAAAGGATATTGAATACCTCCTACCCCACCCAGAGTaGCCCAAAGCAGATTGCTGG +
Preference number: 4 (lower is better)
Translates to: MKETVSAEVLEAKDIEYLLPHPE*PKADCW
Trigger: CCAGCAATCTGCTTTGGGCCACTCTGGGTGGGGTAG...GAGGTATTCAATATCCTTTGCCTCAAGGACTTCGGCAGATACTGTCTCTTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR CCA 90 bp TTCCCACATGTTGTGGGAGGGACGCAGTGGGAGGTAATTGAATCATGGAGGCCAAGAACAAGAGGTATATaGAATAGGTCTGATCCACCC +
Preference number: 4 (lower is better)
Translates to: FPHVVGGTQWEVIESWRPRTRGI*NRSDPP
Trigger: GGGTGGATCAGACCTATTCCATATACCTCTTGTTCT...TGGCCTCCATGATTCAATTACCTCCCACTGCGTCCCTCCCACAACATGTGGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR CCA 90 bp ATCCTGCACATTCTGATGTGTAAATTCCACGATAGGGCAAAAGCATGCCACTCCGTGGGAGGGACGCAGTaGGAGGTAATTGAATCATGG +
Preference number: 4 (lower is better)
Translates to: ILHILMCKFHDRAKACHSVGGTQ*EVIESW
Trigger: CCATGATTCAATTACCTCCCACTGCGTCCCTCCCAC...GGAGTGGCATGCTTTTGCCCTATCGTGGAATTTACACATCAGAATGTGCAGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR CCA 90 bp TGGGAGCCCGAGGCAATAGGATCACCTGAGATTGGGAGTTGGAGACCAGCCTGGTCTGTGATGGGCACATaGATGTGTATTATATTTTTC +
Preference number: 4 (lower is better)
Translates to: WEPEAIGSPEIGSWRPAWSVMGT*MCIIFF
Trigger: GAAAAATATAATACACATCCATGTGCCCATCACAGA...CCAGGCTGGTCTCCAACTCCCAATCTCAGGTGATCCTATTGCCTCGGGCTCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371205.5
3UTR CAA 72 bp GCTGCTGCTTCATGGAATAAGCAAACAAAGCCCATGTaGTGTGACGGGTGGCAACACTTTCAGACTTGGATC +
Preference number: 4 (lower is better)
Translates to: AAASWNKQTKPM*CDGWQHFQTWI
Trigger: GATCCAAGTCTGAAAGTGTTGCCACCCGTCACACAACATGGGCTTTGTTTGCTTATTCCATGAAGCAGCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
3UTR CAA 72 bp GACCCCAGAATGGTAGATCAACCACCAACTTGCATCTaGTGCCTGGAAAAGCTACAGACACTCAACATCAGC +
Preference number: 4 (lower is better)
Translates to: DPRMVDQPPTCI*CLEKLQTLNIS
Trigger: GCTGATGTTGAGTGTCTGTAGCTTTTCCAGGCACAAGATGCAAGTTGGTGGTTGATCTACCATTCTGGGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371205.5
3UTR CAA 72 bp AGGAGACTGGCAGCATTTCACCCTTGCCCTAGAGATTaGTGGAACTTAGAGCTTGAGAGAGATGACTTAGGG +
Preference number: 4 (lower is better)
Translates to: RRLAAFHPCPRD*WNLELERDDLG
Trigger: CCCTAAGTCATCTCTCTCAAGCTCTAAGTTCCACAAATCTCTAGGGCAAGGGTGAAATGCTGCCAGTCTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371205.5
3UTR CAA 72 bp TCCAGGCTGAGGTGGTCTCAGATGGAGATGAAGACCTaGTTGGGAACTGAAGTAAAGGTGACCCTTGTTATG +
Preference number: 4 (lower is better)
Translates to: SRLRWSQMEMKT*LGTEVKVTLVM
Trigger: CATAACAAGGGTCACCTTTACTTCAGTTCCCAACAAGGTCTTCATCTCCATCTGAGACCACCTCAGCCTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR TCA 90 bp AGACAGTATCTGCCGAAGTCCTTGAGGCAAAGGATATTGAATACCTCCAAAAGACAAAGGGGTAGTTGCTaGGGCTCCTCTCCACCACAT +
Preference number: 4 (lower is better)
Translates to: RQYLPKSLRQRILNTSKRQRGSC*GSSPPH
Trigger: ATGTGGTGGAGAGGAGCCTCAGCAACTACCCCTTTG...TCTTTTGGAGGTATTCAATATCCTTTGCCTCAAGGACTTCGGCAGATACTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR TCA 90 bp AACCTGAATGTCCTTGGCCAGTTTCTGCCAGAGTGCCTGATCCTTCCCATAGCAACCTTGTTTTCTGACTaGATTTGCCCAGCAGATAGT +
Preference number: 4 (lower is better)
Translates to: NLNVLGQFLPECLILPIATLFSD*ICPADS
Trigger: ACTATCTGCTGGGCAAATTCAGTCAGAAAACAAGGT...TGCTATGGGAAGGATCAGGCACTCTGGCAGAAACTGGCCAAGGACATTCAGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000483213.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR TCA 90 bp TTCAAACTGCTGGAATGGAAGAGTCATCTCAAATCTCTTGGTGCAGGGGGTCTTGGCAGTAACTGGTGTTaGAGAGCTCCAGGATGCTTT +
Preference number: 4 (lower is better)
Translates to: FKLLEWKSHLKSLGAGGLGSNWC*RAPGCF
Trigger: AAAGCATCCTGGAGCTCTTCAACACCAGTTACTGCC...AAGACCCCCTGCACCAAGAGATTTGAGATGACTCTTCCATTCCAGCAGTTTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635076.1
ENST00000639992.1
CDS-3UTR TCA 90 bp CAGACAGGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCCTGGACGGCTTTAAAACTCAGTaGACTATCTTTATGGTACAG +
Preference number: 4 (lower is better)
Translates to: QTGKDGLEHCDGGKCSLDGFKTQ*TIFMVQ
Trigger: CTGTACCATAAAGATAGTTCACTGAGTTTTAAAGCC...GTCCAGGGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTGTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR TCA 90 bp GGGTGCAGGGTCTCTTCATGTTTCCATGGTAAGGTCTATAGCTGCTGCTTCATGAGCCATTTGGGCAAATaGCTTAACCTCTCTGAACCT +
Preference number: 4 (lower is better)
Translates to: GCRVSSCFHGKVYSCCFMSHLGK*LNLSEP
Trigger: AGGTTCAGAGAGGTTAAGTCATTTGCCCAAATGGCT...CATGAAGCAGCAGCTATAGACCTTACCATGGAAACATGAAGAGACCCTGCACCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR TCA 90 bp CTTGAGCACACAGCGTGGTACACCACAAATGCTCAACCAACAGCAGCGATGACATCATCGGCCACTATTTaGTGTCAATCTACTATGCTG +
Preference number: 4 (lower is better)
Translates to: LEHTAWYTTNAQPTAAMTSSATI*CQSTML
Trigger: CAGCATAGTAGATTGACATCAAATAGTGGCCGATGA...TGTCATCGCTGCTGTTGGTTGAGCATTTGTGGTGTACCACGCTGTGTGCTCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR TCA 90 bp TCAGTAAAAGCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGGCACCTCCTCACTATTaGAAAATCCATTATACCTGT +
Preference number: 4 (lower is better)
Translates to: SVKAKEASHSSRLALADRAPPHY*KIHYTC
Trigger: ACAGGTATAATGGATTTTTCAATAGTGAGGAGGTGC...CCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGCTTTTACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR TCA 90 bp GGGTGCAGGGTCTCTTCATGTTTCCATGGTAAGGTCTATAGCTGCTGCTTCATGATACATCTAATACACTaGAGACCAGGGCAAGAGAGC +
Preference number: 4 (lower is better)
Translates to: GCRVSSCFHGKVYSCCFMIHLIH*RPGQES
Trigger: GCTCTCTTGCCCTGGTCTTCAGTGTATTAGATGTAT...CATGAAGCAGCAGCTATAGACCTTACCATGGAAACATGAAGAGACCCTGCACCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR TCA 90 bp CAGGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCCTGGACGATTATACTGATAGTGATATaGACAATAAGGTCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: QGRMALNTAMEENAPWTIILIVI*TIRSRL
Trigger: CAGCCTGGACCTTATTGTTCATATCACTATCAGTAT...AATCGTCCAGGGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR GCA 90 bp ACAGGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCCTGGACGATGTCATTCTCCTTTTCTaGTGGCCACTTATAGATGTA +
Preference number: 4 (lower is better)
Translates to: TGKDGLEHCDGGKCSLDDVILLF*WPLIDV
Trigger: TACATCTATAAGTGGCCAGCAGAAAAGGAGAATGAC...ATCGTCCAGGGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000639992.1
CDS-3UTR GCA 90 bp GAATGTCCTTGGCCAGTTTCTGCCAGAGTGCCTGATCCTTCCCATAGCACAAGAAGACATTGTAGTCCTTaGCATAGAGGCGAAATTGCA +
Preference number: 4 (lower is better)
Translates to: ECPWPVSARVPDPSHSTRRHCSP*HRGEIA
Trigger: TGCAATTTCGCCTCTATGGCAAGGACTACAATGTCT...TCTTGTGCTATGGGAAGGATCAGGCACTCTGGCAGAAACTGGCCAAGGACATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000483213.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR GCA 90 bp GTAGACATTGTAGTCCTTGCCATAGAGGCGAAATTGCAGAGCATTATCTGGGGACAGTTTCTGCCAGAGTaGCTGATCCTTCCCATAGCA +
Preference number: 4 (lower is better)
Translates to: VDIVVLAIEAKLQSIIWGQFLPE*LILPIA
Trigger: TGCTATGGGAAGGATCAGGCACTCTGGCAGAAACTG...TCCCCAGATAATGCTCTGCAATTTCGCCTCTATGGCAAGGACTACAATGTCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000483213.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR GCA 90 bp AGTAAAAGCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGGAGAGAATTTCATTACTTaGAACCTGAATGTCCTTGGC +
Preference number: 4 (lower is better)
Translates to: SKSQGSFTLVKTGPGRQGENFIT*NLNVLG
Trigger: GCCAAGGACATTCAGGTTGCAAGTAATGAAATTCTC...TCCCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGCTTTTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR GCA 90 bp ACTTGCAACCTGAATGTCCTTGGCCAGTTTCTGCCAGAGTGCCTGATCCTTCCCGAGAATTTCATTACTTaGAACCTGAATGTCCTTGGC +
Preference number: 4 (lower is better)
Translates to: TCNLNVLGQFLPECLILPENFIT*NLNVLG
Trigger: GCCAAGGACATTCAGGTTGCAAGTAATGAAATTCTC...GGGAAGGATCAGGCACTCTGGCAGAAACTGGCCAAGGACATTCAGGTTGCAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000483213.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR GCA 90 bp ATCCTGCACATTCTGATGTGTAAATTCCACGATAGGGCAAAAGCATGCCACTCCGGTGTGGACAATGGTTaGTCAGCTGGGATCATGTTG +
Preference number: 4 (lower is better)
Translates to: ILHILMCKFHDRAKACHSGVDNG*SAGIML
Trigger: CAACATGATCCCAGCTGAGCAACCATTGTCCACACC...GGAGTGGCATGCTTTTGCCCTATCGTGGAATTTACACATCAGAATGTGCAGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR GCA 90 bp CAGTTCCTGAGATTCTTCTTTCAGCCAGCTCAGCCTCCTATCACAGGACTCAAGAATAACAGGCATCCCTaGCTTCACATCTTCATGGGA +
Preference number: 4 (lower is better)
Translates to: QFLRFFFQPAQPPITGLKNNRHP*LHIFMG
Trigger: TCCCATGAAGATGTGAAGGCAGGGATGCCTGTTATT...CTTGAGTCCTGTGATAGGAGGCTGAGCTGGCTGAAAGAAGAATCTCAGGAACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR GCA 90 bp GCTTCAGTAAAAGCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACTGTACAATGAAGTGCTaGATGGCAAACTACACAGAA +
Preference number: 4 (lower is better)
Translates to: ASVKAKEASHSSRLALADCTMKC*MANYTE
Trigger: TTCTGTGTAGTTTGCCATGCAGCACTTCATTGTACA...GTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGCTTTTACTGAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR CCA 90 bp GCCATAGAGGCGAAATTGCAGAGCATTATCTGGGGACTCGATAGTCTGGTTTTGAGGAGAAGCCAAGGATaGCTAGGATATTCTTGGAGC +
Preference number: 4 (lower is better)
Translates to: AIEAKLQSIIWGLDSLVLRRSQG*LGYSWS
Trigger: GCTCCAAGAATATCCTAGCCATCCTTGGCTTCTCCT...CAAAACCAGACTATCGAGTCCCCAGATAATGCTCTGCAATTTCGCCTCTATGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CCA 90 bp CAGACAGGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCCTGGACAGGTTTCCTGATTATTaGTTTCATATGGGACTATGC +
Preference number: 4 (lower is better)
Translates to: QTGKDGLEHCDGGKCSLDRFPDY*FHMGLC
Trigger: GCATAGTCCCATATGAAACCAATAATCAGGAAACCT...GTCCAGGGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTGTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CCA 90 bp ATCCTGCACATTCTGATGTGTAAATTCCACGATAGGGCAAAAGCATGCCACTCCCAACCTGAATGTCCTTaGCCAGTTTCTGCCAGAGTG +
Preference number: 4 (lower is better)
Translates to: ILHILMCKFHDRAKACHSQPECP*PVSARV
Trigger: CACTCTGGCAGAAACTGGCCAAGGACATTCAGGTTG...GGAGTGGCATGCTTTTGCCCTATCGTGGAATTTACACATCAGAATGTGCAGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR CCA 90 bp CTTGAGCACACAGCGTGGTACACCACAAATGCTCAACCAACAGCAGCGATGACATCATCTCAAATCTCTTaGTGCAGGGGGTCTTGTAAA +
Preference number: 4 (lower is better)
Translates to: LEHTAWYTTNAQPTAAMTSSQIS*CRGSCK
Trigger: TTTACAAGACCCCCTGCACCAAGAGATTTGAGATGA...TGTCATCGCTGCTGTTGGTTGAGCATTTGTGGTGTACCACGCTGTGTGCTCAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR CCA 90 bp GGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCCTGGACGATTTTTCATCTCAAATCTCTTaGTGCAGGGGGTCTTGTAAA +
Preference number: 4 (lower is better)
Translates to: GKDGLEHCDGGKCSLDDFSSQIS*CRGSCK
Trigger: TTTACAAGACCCCCTGCACCAAGAGATTTGAGATGA...AAAATCGTCCAGGGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CCA 90 bp ACAGGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCCTGGACGATTGGATTTCAAACTGCTaGAATGGAAGAGTCATCTCA +
Preference number: 4 (lower is better)
Translates to: TGKDGLEHCDGGKCSLDDWISNC*NGRVIS
Trigger: TGAGATGACTCTTCCATTCCAGCAGTTTGAAATCCA...ATCGTCCAGGGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CCA 90 bp TTTGGGTATCACCTAGGAATATGTGATTTATTGACATACCTGCTTTGGGTGGGACCGGCGTCGCTGCCCTaGATCTTGCCAATGAAATGG +
Preference number: 4 (lower is better)
Translates to: FGYHLGICDLLTYLLWVGPASLP*ILPMKW
Trigger: CCATTTCATTGGCAAGATCCAGGGCAGCGACGCCGG...TCCCACCCAAAGCAGGTATGTCAATAAATCACATATTCCTAGGTGATACCCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR CCA 90 bp GCCATAGAGGCGAAATTGCAGAGCATTATCTGGGGACTCGATAGTCTGGTTTTGCAATGGTTGCTCAGCTaGGATCATGTTGGTCAGGTT +
Preference number: 4 (lower is better)
Translates to: AIEAKLQSIIWGLDSLVLQWLLS*DHVGQV
Trigger: AACCTGACCAACATGATCCCAGCTGAGCAACCATTG...CAAAACCAGACTATCGAGTCCCCAGATAATGCTCTGCAATTTCGCCTCTATGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CCA 90 bp GCCGAAGTCCTTGAGGCAAAGGATATTGAATACCTCCAAAAGAAAGGCTTCAGTACCCACAGAGCAGGCTaGGAATGGAATGTGTGTCTG +
Preference number: 4 (lower is better)
Translates to: AEVLEAKDIEYLQKKGFSTHRAG*EWNVCL
Trigger: CAGACACACATTCCATTCCCAGCCTGCTCTGTGGGT...ACTGAAGCCTTTCTTTTGGAGGTATTCAATATCCTTTGCCTCAAGGACTTCGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR CCA 90 bp TCAGTAAAAGCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGAACACAAAAGATCTATaGTTTCTGCCTACCCAGGAT +
Preference number: 4 (lower is better)
Translates to: SVKAKEASHSSRLALADRNTKDL*FLPTQD
Trigger: ATCCTGGGTAGGCAGAAACCATAGATCTTTTGTGTT...CCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGCTTTTACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR CCA 90 bp TTTGGGTATCACCTAGGAATATGTGATTTATTGACATACCTGCTTTGGGTGGGAATTAGCCGGGTGTGGTaGTGGGCACCTGCAATCCCA +
Preference number: 4 (lower is better)
Translates to: FGYHLGICDLLTYLLWVGISRVW*WAPAIP
Trigger: TGGGATTGCAGGTGCCCACCACCACACCCGGCTAAT...TCCCACCCAAAGCAGGTATGTCAATAAATCACATATTCCTAGGTGATACCCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR CCA 90 bp GCCGAAGTCCTTGAGGCAAAGGATATTGAATACCTCCAAAAGAAAGGCTTCAGTAAAATTAGCCGGGTGTaGTGGTGGGCACCTGCAATC +
Preference number: 4 (lower is better)
Translates to: AEVLEAKDIEYLQKKGFSKISRV*WWAPAI
Trigger: GATTGCAGGTGCCCACCACCACACCCGGCTAATTTT...ACTGAAGCCTTTCTTTTGGAGGTATTCAATATCCTTTGCCTCAAGGACTTCGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR CCA 90 bp CTTGAGCACACAGCGTGGTACACCACAAATGCTCAACCAACAGCAGCGATGACATCTCAGATGAGACTTTaGACTGTGGACTTTTGGGTT +
Preference number: 4 (lower is better)
Translates to: LEHTAWYTTNAQPTAAMTSQMRL*TVDFWV
Trigger: AACCCAAAAGTCCACAGTCCAAAGTCTCATCTGAGA...TGTCATCGCTGCTGTTGGTTGAGCATTTGTGGTGTACCACGCTGTGTGCTCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR TCA 90 bp AATGTCCTTGGCCAGTTTCTGCCAGAGTGCCTGATCCTTCCCATAGCACAAGAAACCTTGTTTTCTGACTaGATTTGCCCAGCAGATAGT +
Preference number: 4 (lower is better)
Translates to: NVLGQFLPECLILPIAQETLFSD*ICPADS
Trigger: ACTATCTGCTGGGCAAATTCAGTCAGAAAACAAGGT...TTCTTGTGCTATGGGAAGGATCAGGCACTCTGGCAGAAACTGGCCAAGGACATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000483213.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR TCA 90 bp GCCATAGAGGCGAAATTGCAGAGCATTATCTGGGGACTCGATAGTCTGGTTTTGCATATGGGACTATGCTaGACCACCTTGTTTTCTGAC +
Preference number: 4 (lower is better)
Translates to: AIEAKLQSIIWGLDSLVLHMGLC*TTLFSD
Trigger: GTCAGAAAACAAGGTGGTTCAGCATAGTCCCATATG...CAAAACCAGACTATCGAGTCCCCAGATAATGCTCTGCAATTTCGCCTCTATGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000483213.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR TCA 90 bp AATGTCCTTGGCCAGTTTCTGCCAGAGTGCCTGATCCTTCCCATAGCACAAGAAGAAAGCATGGGTCCCTaGGAATTTCATTACTTGCAA +
Preference number: 4 (lower is better)
Translates to: NVLGQFLPECLILPIAQEESMGP*EFHYLQ
Trigger: TTGCAAGTAATGAAATTCTCAGGGACCCATGCTTTC...TTCTTGTGCTATGGGAAGGATCAGGCACTCTGGCAGAAACTGGCCAAGGACATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000483213.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR TCA 90 bp ATGAAAGAGACAGTATCTGCCGAAGTCCTTGAGGCAAAGGATATTGAATACCTCCCTGGATCTTGCCAATaGAATGGATGTGCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: MKETVSAEVLEAKDIEYLPGSCQ*NGCAPR
Trigger: CCTGGGAGCACATCCATTTCATTGGCAAGATCCAGG...GAGGTATTCAATATCCTTTGCCTCAAGGACTTCGGCAGATACTGTCTCTTTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR TCA 90 bp ACCAGAAAAGCAGTATTCACTCAGGTACTTCTCCTTTACTCCAGCGTAAGATGTCCTGGATCTTGCCAATaGAATGGATGTGCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: TRKAVFTQVLLLYSSVRCPGSCQ*NGCAPR
Trigger: CCTGGGAGCACATCCATTTCATTGGCAAGATCCAGG...ACATCTTACGCTGGAGTAAAGGAGAAGTACCTGAGTGAATACTGCTTTTCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635076.1
ENST00000639992.1
CDS-3UTR TCA 90 bp GAAACATCACCAGTCAATCCTGCTCAACAGGTAACTCTTGCAGCAATCCTTAAGAAAGCCCATGTTGTGTaGCGGGTGGCAACACTTTCA +
Preference number: 4 (lower is better)
Translates to: ETSPVNPAQQVTLAAILKKAHVV*RVATLS
Trigger: TGAAAGTGTTGCCACCCGTCACACAACATGGGCTTT...CTTAAGGATTGCTGCAAGAGTTACCTGTTGAGCAGGATTGACTGGTGATGTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR TCA 90 bp CTTGAGCACACAGCGTGGTACACCACAAATGCTCAACCAACAGCAGCGATGACAAATAGATTGTGTGCATaGCAGTGCTTTGTATACGCA +
Preference number: 4 (lower is better)
Translates to: LEHTAWYTTNAQPTAAMTNRLCA*QCFVYA
Trigger: TGCGTATACAAAGCACTGTCATGCACACAATCTATT...TGTCATCGCTGCTGTTGGTTGAGCATTTGTGGTGTACCACGCTGTGTGCTCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR TCA 90 bp GACTTGCATGGACCCTGTAACCCCTTTGTTTTGGCCAATTTCTCTCATTTGGAATCATGCATCTTGGACTaGATAACAGGCATCCCTGCC +
Preference number: 4 (lower is better)
Translates to: DLHGPCNPFVLANFSHLESCILD*ITGIPA
Trigger: GGCAGGGATGCCTGTTATTCAGTCCAAGATGCATGA...TTCCAAATGAGAGAAATTGGCCAAAACAAAGGGGTTACAGGGTCCATGCAAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR TCA 90 bp TTCCCACATGTTGTGGGAGGGACGCAGTGGGAGGTAATTGAATCATGGAGGCCAAAAGTACAAAATCATTaGTATGGTTTGGCTGTGTCC +
Preference number: 4 (lower is better)
Translates to: FPHVVGGTQWEVIESWRPKVQNH*YGLAVS
Trigger: GGACACAGCCAAACCATATCAATGATTTTGTACTTT...TGGCCTCCATGATTCAATTACCTCCCACTGCGTCCCTCCCACAACATGTGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR TCA 90 bp GGGTGCAGGGTCTCTTCATGTTTCCATGGTAAGGTCTATAGCTGCTGCTTCATGCCCACCTTCACCATTTaGCTGTCAGTAAAAGAATGT +
Preference number: 4 (lower is better)
Translates to: GCRVSSCFHGKVYSCCFMPTFTI*LSVKEC
Trigger: ACATTCTTTTACTGACAGTCAAATGGTGAAGGTGGG...CATGAAGCAGCAGCTATAGACCTTACCATGGAAACATGAAGAGACCCTGCACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR GCA 90 bp GAATGTCCTTGGCCAGTTTCTGCCAGAGTGCCTGATCCTTCCCATAGCACAAGAGTCATTCTCCTTTTCTaGTGGCCACTTATAGATGTA +
Preference number: 4 (lower is better)
Translates to: ECPWPVSARVPDPSHSTRVILLF*WPLIDV
Trigger: TACATCTATAAGTGGCCAGCAGAAAAGGAGAATGAC...TCTTGTGCTATGGGAAGGATCAGGCACTCTGGCAGAAACTGGCCAAGGACATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483213.6
ENST00000639992.1
CDS-3UTR GCA 90 bp GGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCCTGGACGATTTTGTCATTCTCCTTTTCTaGTGGCCACTTATAGATGTA +
Preference number: 4 (lower is better)
Translates to: GKDGLEHCDGGKCSLDDFVILLF*WPLIDV
Trigger: TACATCTATAAGTGGCCAGCAGAAAAGGAGAATGAC...AAAATCGTCCAGGGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000639992.1
CDS-3UTR GCA 90 bp CCTTGGCCAGTTTCTGCCAGAGTGCCTGATCCTTCCCATAGCACAAGAAGCTATGTCATTCTCCTTTTCTaGTGGCCACTTATAGATGTA +
Preference number: 4 (lower is better)
Translates to: PWPVSARVPDPSHSTRSYVILLF*WPLIDV
Trigger: TACATCTATAAGTGGCCAGCAGAAAAGGAGAATGAC...ATAGCTTCTTGTGCTATGGGAAGGATCAGGCACTCTGGCAGAAACTGGCCAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483213.6
ENST00000639992.1
CDS-3UTR GCA 90 bp GCCAGTAATGATCCTGGCACCCTGGAAGTCAAAGGGGTAGTTGCTGAGGCTCCTTATTTCAGCTGCTTTTaGTATACCATATCTTTCCAG +
Preference number: 4 (lower is better)
Translates to: ASNDPGTLEVKGVVAEAPYFSCF*YTISFQ
Trigger: CTGGAAAGATATGGTATAGCAAAAGCAGCTGAAATA...AGGAGCCTCAGCAACTACCCCTTTGACTTCCAGGGTGCCAGGATCATTACTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635076.1
CDS-3UTR GCA 90 bp GAAGAGCTCCAGGATGCTTTGATGGCATTGTTGATAGTTTCCAATACCCTGGATGATGGCCTTGAACACTaGGATGGAGGAAAATGCTCC +
Preference number: 4 (lower is better)
Translates to: EELQDALMALLIVSNTLDDGLEH*DGGKCS
Trigger: GGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATC...ATCCAGGGTATTGGAAACTATCAACAATGCCATCAAAGCATCCTGGAGCTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635076.1
ENST00000639992.1
CDS-3UTR GCA 90 bp GGGTGCAGGGTCTCTTCATGTTTCCATGGTAAGGTCTATAGCTGCTGCTTCATGAACAGACCAGCTTTCTaGCTCCCTTTCTATGAATAC +
Preference number: 4 (lower is better)
Translates to: GCRVSSCFHGKVYSCCFMNRPAF*LPFYEY
Trigger: GTATTCATAGAAAGGGAGGCAGAAAGCTGGTCTGTT...CATGAAGCAGCAGCTATAGACCTTACCATGGAAACATGAAGAGACCCTGCACCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR CCA 90 bp CAGGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCCTGGACGATTATTATTGGTTTCATATaGGACTATGCTGAACCACCT +
Preference number: 4 (lower is better)
Translates to: QGRMALNTAMEENAPWTIIIGFI*DYAEPP
Trigger: AGGTGGTTCAGCATAGTCCCATATGAAACCAATAAT...AATCGTCCAGGGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CCA 90 bp ACAGGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCCTGGACGATATTATTGGTTTCATATaGGACTATGCTGAACCACCT +
Preference number: 4 (lower is better)
Translates to: TGKDGLEHCDGGKCSLDDIIGFI*DYAEPP
Trigger: AGGTGGTTCAGCATAGTCCCATATGAAACCAATAAT...ATCGTCCAGGGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CCA 90 bp AGTAAAAGCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGGAAGGTTTCCTGATTATTaGTTTCATATGGGACTATGC +
Preference number: 4 (lower is better)
Translates to: SKSQGSFTLVKTGPGRQGRFPDY*FHMGLC
Trigger: GCATAGTCCCATATGAAACCAATAATCAGGAAACCT...TCCCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGCTTTTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CCA 90 bp GGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCCTGGACGATTTTTGGATTTCAAACTGCTaGAATGGAAGAGTCATCTCA +
Preference number: 4 (lower is better)
Translates to: GKDGLEHCDGGKCSLDDFWISNC*NGRVIS
Trigger: TGAGATGACTCTTCCATTCCAGCAGTTTGAAATCCA...AAAATCGTCCAGGGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CCA 90 bp TTCAAACTGCTGGAATGGAAGAGTCATCTCAAATCTCTTGGTGCAGGGGGTCTTCAATGGTTGCTCAGCTaGGATCATGTTGGTCAGGTT +
Preference number: 4 (lower is better)
Translates to: FKLLEWKSHLKSLGAGGLQWLLS*DHVGQV
Trigger: AACCTGACCAACATGATCCCAGCTGAGCAACCATTG...AAGACCCCCTGCACCAAGAGATTTGAGATGACTCTTCCATTCCAGCAGTTTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CCA 90 bp ATCTGCTTTTTGCAAATCTCAGGTCTGAGTGTTCCACTCTGTAGCATTTGGGTAAGTGGGAGAGAGGTGTaGACAATGGTTGCTCAGCTG +
Preference number: 4 (lower is better)
Translates to: ICFLQISGLSVPLCSIWVSGREV*TMVAQL
Trigger: CAGCTGAGCAACCATTGTCCACACCTCTCTCCCACT...TACCCAAATGCTACAGAGTGGAACACTCAGACCTGAGATTTGCAAAAAGCAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR CCA 90 bp GAAGTCCTTGAGGCAAAGGATATTGAATACCTCCAAAAGAAAGGCTTCAGTAAACACACTCGTCAAGACTaGCCCTGGCAGACAGGGAAG +
Preference number: 4 (lower is better)
Translates to: EVLEAKDIEYLQKKGFSKHTRQD*PWQTGK
Trigger: CTTCCCTGTCTGCCAGGGCCAGTCTTGACGAGTGTG...TTTACTGAAGCCTTTCTTTTGGAGGTATTCAATATCCTTTGCCTCAAGGACTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CCA 90 bp CAGACAGGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCCTGGACTGGAAAAATAAGATGTaGCTTGGCTTTAAAACTCAG +
Preference number: 4 (lower is better)
Translates to: QTGKDGLEHCDGGKCSLDWKNKM*LGFKTQ
Trigger: CTGAGTTTTAAAGCCAAGCCACATCTTATTTTTCCA...GTCCAGGGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTGTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR CCA 90 bp AGACAGTATCTGCCGAAGTCCTTGAGGCAAAGGATATTGAATACCTCCAAAAGAAAAATTAGCCGGGTGTaGTGGTGGGCACCTGCAATC +
Preference number: 4 (lower is better)
Translates to: RQYLPKSLRQRILNTSKRKISRV*WWAPAI
Trigger: GATTGCAGGTGCCCACCACCACACCCGGCTAATTTT...TCTTTTGGAGGTATTCAATATCCTTTGCCTCAAGGACTTCGGCAGATACTGTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR CCA 90 bp CCACCATTCCTGGTATCAGTCCAGGTAAAATATATTACAGCTCTTTACTGGAGCGAGCTGCTGTGGTTCTaGTTCTCCCTGCAGGATGAA +
Preference number: 4 (lower is better)
Translates to: PPFLVSVQVKYITALYWSELLWF*FSLQDE
Trigger: TTCATCCTGCAGGGAGAACCAGAACCACAGCAGCTC...GCTCCAGTAAAGAGCTGTAATATATTTTACCTGGACTGATACCAGGAATGGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR CCA 90 bp TACTTGCAACCTGAATGTCCTTGGCCAGTTTCTGCCAGAGTGCCTGATCCTTCCATCCTTAACGTTTTCTaGCAATGCTTTGTTCTGGGT +
Preference number: 4 (lower is better)
Translates to: YLQPECPWPVSARVPDPSILNVF*QCFVLG
Trigger: ACCCAGAACAAAGCATTGCCAGAAAACGTTAAGGAT...GGAAGGATCAGGCACTCTGGCAGAAACTGGCCAAGGACATTCAGGTTGCAAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635076.1
3UTR CAA 72 bp CTCAACAGTCAGTCCCCAGATCTAGAGATGGAGAGCTaGGGACAAGGTCAGAATGAAACATCACCAGTCAAT +
Preference number: 4 (lower is better)
Translates to: LNSQSPDLEMES*GQGQNETSPVN
Trigger: ATTGACTGGTGATGTTTCATTCTGACCTTGTCCCAAGCTCTCCATCTCTAGATCTGGGGACTGACTGTTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR TCA 90 bp GCCGAAGTCCTTGAGGCAAAGGATATTGAATACCTCCAAAAGAAAGGCTTCAGTCCCAGGAATCAGCTGTaGAATGATAGCCTTGCAGAA +
Preference number: 4 (lower is better)
Translates to: AEVLEAKDIEYLQKKGFSPRNQL*NDSLAE
Trigger: TTCTGCAAGGCTATCATTTCACAGCTGATTCCTGGG...ACTGAAGCCTTTCTTTTGGAGGTATTCAATATCCTTTGCCTCAAGGACTTCGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR TCA 90 bp GAGGCAAAGGATATTGAATACCTCCAAAAGAAAGGCTTCAGTAAAAGCCAAGGAAGGGAAGGATGGCCTTaGACACTGCGATGGAGGAAA +
Preference number: 4 (lower is better)
Translates to: EAKDIEYLQKKGFSKSQGREGWP*TLRWRK
Trigger: TTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCT...TCCTTGGCTTTTACTGAAGCCTTTCTTTTGGAGGTATTCAATATCCTTTGCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR TCA 90 bp GGGTGCAGGGTCTCTTCATGTTTCCATGGTAAGGTCTATAGCTGCTGCTTCATGAATAGATTGTGTGCATaGCAGTGCTTTGTATACGCA +
Preference number: 4 (lower is better)
Translates to: GCRVSSCFHGKVYSCCFMNRLCA*QCFVYA
Trigger: TGCGTATACAAAGCACTGTCATGCACACAATCTATT...CATGAAGCAGCAGCTATAGACCTTACCATGGAAACATGAAGAGACCCTGCACCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR TCA 90 bp GGGTGCAGGGTCTCTTCATGTTTCCATGGTAAGGTCTATAGCTGCTGCTTCATGAAGGAAGAGACATTCTaGCTTGGAAATTTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: GCRVSSCFHGKVYSCCFMKEETF*LGNLEK
Trigger: CTTCTCCAAATTTCCAAGTCAGAATGTCTCTTCCTT...CATGAAGCAGCAGCTATAGACCTTACCATGGAAACATGAAGAGACCCTGCACCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR TCA 90 bp AAGTCCTTGAGGCAAAGGATATTGAATACCTCCAAAAGAAAGGCTTCAGTAAAATGCCTAGTGGAGCTGTaGGAAGAAGGCCACAGTCCC +
Preference number: 4 (lower is better)
Translates to: KSLRQRILNTSKRKASVKCLVEL*EEGHSP
Trigger: GGGACTGTGGCCTTCTTCTCACAGCTCCACTAGGCA...TTTTACTGAAGCCTTTCTTTTGGAGGTATTCAATATCCTTTGCCTCAAGGACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR TCA 90 bp GACTTGCATGGACCCTGTAACCCCTTTGTTTTGGCCAATTTCTCTCATTTGGAAGACCTTGTTGGGAACTaGAGTAAAGGTGACCCTTGT +
Preference number: 4 (lower is better)
Translates to: DLHGPCNPFVLANFSHLEDLVGN*SKGDPC
Trigger: ACAAGGGTCACCTTTACTTCAGTTCCCAACAAGGTC...TTCCAAATGAGAGAAATTGGCCAAAACAAAGGGGTTACAGGGTCCATGCAAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR TCA 90 bp GGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCCTGGACGATTTTACCCAAATCTCAACTTaGATTGTACCTTCCAGAATT +
Preference number: 4 (lower is better)
Translates to: GKDGLEHCDGGKCSLDDFTQIST*IVPSRI
Trigger: AATTCTGGAAGGTACAATTCAAGTTGAGATTTGGGT...AAAATCGTCCAGGGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR TCA 90 bp ATGAAAGAGACAGTATCTGCCGAAGTCCTTGAGGCAAAGGATATTGAATACCTCAAGCCTCTGGTCCCATaGCCAGCAATCCTTTCTCAA +
Preference number: 4 (lower is better)
Translates to: MKETVSAEVLEAKDIEYLKPLVP*PAILSQ
Trigger: TTGAGAAAGGATTGCTGGTCATGGGACCAGAGGCTT...GAGGTATTCAATATCCTTTGCCTCAAGGACTTCGGCAGATACTGTCTCTTTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371207.8
CDS-3UTR GCA 90 bp GCCGAAGTCCTTGAGGCAAAGGATATTGAATACCTCCAAAAGAAAGGCTTCAGTCCAATGAAATGGATGTaGTCCCAGGAATCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: AEVLEAKDIEYLQKKGFSPMKWM*SQESAV
Trigger: CACAGCTGATTCCTGGGAGCACATCCATTTCATTGG...ACTGAAGCCTTTCTTTTGGAGGTATTCAATATCCTTTGCCTCAAGGACTTCGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR GCA 90 bp GTATCTGCCGAAGTCCTTGAGGCAAAGGATATTGAATACCTCCAAAAGAAAGGCCCAATGAAATGGATGTaGTCCCAGGAATCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: VSAEVLEAKDIEYLQKKGPMKWM*SQESAV
Trigger: CACAGCTGATTCCTGGGAGCACATCCATTTCATTGG...GCCTTTCTTTTGGAGGTATTCAATATCCTTTGCCTCAAGGACTTCGGCAGATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR GCA 90 bp ATGAAAGAGACAGTATCTGCCGAAGTCCTTGAGGCAAAGGATATTGAATACCTCGGTGTGGACAATGGTTaGTCAGCTGGGATCATGTTG +
Preference number: 4 (lower is better)
Translates to: MKETVSAEVLEAKDIEYLGVDNG*SAGIML
Trigger: CAACATGATCCCAGCTGAGCAACCATTGTCCACACC...GAGGTATTCAATATCCTTTGCCTCAAGGACTTCGGCAGATACTGTCTCTTTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR GCA 90 bp AGTAAAAGCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGGATATTTCAGCTGCTTTTaGTATACCATATCTTTCCAG +
Preference number: 4 (lower is better)
Translates to: SKSQGSFTLVKTGPGRQGYFSCF*YTISFQ
Trigger: CTGGAAAGATATGGTATAGCAAAAGCAGCTGAAATA...TCCCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGCTTTTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR GCA 90 bp GGGTGCAGGGTCTCTTCATGTTTCCATGGTAAGGTCTATAGCTGCTGCTTCATGGCTTTAAAATTTGACTaGCCCACTGGATTTCAGACT +
Preference number: 4 (lower is better)
Translates to: GCRVSSCFHGKVYSCCFMALKFD*PTGFQT
Trigger: AGTCTGAAATCCAGTGGGGCAGTCAAATTTTAAAGC...CATGAAGCAGCAGCTATAGACCTTACCATGGAAACATGAAGAGACCCTGCACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR GCA 90 bp AGTAAAAGCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGGACCATTTATCTGTATTTaGCCCCATTTTCATTGTTAC +
Preference number: 4 (lower is better)
Translates to: SKSQGSFTLVKTGPGRQGPFICI*PHFHCY
Trigger: GTAACAATGAAAATGGGGGCAAATACAGATAAATGG...TCCCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGCTTTTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR GCA 90 bp ATCCTGCACATTCTGATGTGTAAATTCCACGATAGGGCAAAAGCATGCCACTCCGTGCCTTCCTCTGGATaGACTGTCTGTATACTTTTG +
Preference number: 4 (lower is better)
Translates to: ILHILMCKFHDRAKACHSVPSSG*TVCILL
Trigger: CAAAAGTATACAGACAGTGCATCCAGAGGAAGGCAC...GGAGTGGCATGCTTTTGCCCTATCGTGGAATTTACACATCAGAATGTGCAGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR CCA 90 bp GACTTGCATGGACCCTGTAACCCCTTTGTTTTGGCCAATTTCTCTCATTTGGAAAGGAGAAGCCAAGGATaGCTAGGATATTCTTGGAGC +
Preference number: 4 (lower is better)
Translates to: DLHGPCNPFVLANFSHLERRSQG*LGYSWS
Trigger: GCTCCAAGAATATCCTAGCCATCCTTGGCTTCTCCT...TTCCAAATGAGAGAAATTGGCCAAAACAAAGGGGTTACAGGGTCCATGCAAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR CCA 90 bp GGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCCTGGACGATTTTAGGTTTCCTGATTATTaGTTTCATATGGGACTATGC +
Preference number: 4 (lower is better)
Translates to: GKDGLEHCDGGKCSLDDFRFPDY*FHMGLC
Trigger: GCATAGTCCCATATGAAACCAATAATCAGGAAACCT...AAAATCGTCCAGGGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CCA 90 bp GAATGTCCTTGGCCAGTTTCTGCCAGAGTGCCTGATCCTTCCCATAGCACAAGAAGGTTTCCTGATTATTaGTTTCATATGGGACTATGC +
Preference number: 4 (lower is better)
Translates to: ECPWPVSARVPDPSHSTRRFPDY*FHMGLC
Trigger: GCATAGTCCCATATGAAACCAATAATCAGGAAACCT...TCTTGTGCTATGGGAAGGATCAGGCACTCTGGCAGAAACTGGCCAAGGACATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000483213.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CCA 90 bp TTCAAACTGCTGGAATGGAAGAGTCATCTCAAATCTCTTGGTGCAGGGGGTCTTTTGCAGAGCATTATCTaGGGACTCGATAGTCTGGTT +
Preference number: 4 (lower is better)
Translates to: FKLLEWKSHLKSLGAGGLLQSII*GLDSLV
Trigger: AACCAGACTATCGAGTCCCCAGATAATGCTCTGCAA...AAGACCCCCTGCACCAAGAGATTTGAGATGACTCTTCCATTCCAGCAGTTTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CCA 90 bp GACTTGCATGGACCCTGTAACCCCTTTGTTTTGGCCAATTTCTCTCATTTGGAACAATGGTTGCTCAGCTaGGATCATGTTGGTCAGGTT +
Preference number: 4 (lower is better)
Translates to: DLHGPCNPFVLANFSHLEQWLLS*DHVGQV
Trigger: AACCTGACCAACATGATCCCAGCTGAGCAACCATTG...TTCCAAATGAGAGAAATTGGCCAAAACAAAGGGGTTACAGGGTCCATGCAAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR CCA 90 bp GCCGAAGTCCTTGAGGCAAAGGATATTGAATACCTCCAAAAGAAAGGCTTCAGTCACAGGAGGAGGAACTaGGTTAGGAGTAATGGTAGA +
Preference number: 4 (lower is better)
Translates to: AEVLEAKDIEYLQKKGFSHRRRN*VRSNGR
Trigger: TCTACCATTACTCCTAACCCAGTTCCTCCTCCTGTG...ACTGAAGCCTTTCTTTTGGAGGTATTCAATATCCTTTGCCTCAAGGACTTCGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR CCA 90 bp ATCTGCTTTTTGCAAATCTCAGGTCTGAGTGTTCCACTCTGTAGCATTTGGGTAATCAGAGGAGTGGAGTaGGATATGAGCCTGGAGAGA +
Preference number: 4 (lower is better)
Translates to: ICFLQISGLSVPLCSIWVIRGVE*DMSLER
Trigger: TCTCTCCAGGCTCATATCCCACTCCACTCCTCTGAT...TACCCAAATGCTACAGAGTGGAACACTCAGACCTGAGATTTGCAAAAAGCAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR CCA 90 bp CTTTGTTTTGGCCAATTTCTCTCATTTGGAACAGCTGTATTTACCCAATACCTGCTGAGTATGAGGTGCTaGTCTCCAAAGGCAGAGGGC +
Preference number: 4 (lower is better)
Translates to: LCFGQFLSFGTAVFTQYLLSMRC*SPKAEG
Trigger: GCCCTCTGCCTTTGGAGACCAGCACCTCATACTCAG...CAGGTATTGGGTAAATACAGCTGTTCCAAATGAGAGAAATTGGCCAAAACAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR CCA 90 bp ATGAAAGAGACAGTATCTGCCGAAGTCCTTGAGGCAAAGGATATTGAATACCTCCCAGGGCAAGAGAGCTaGAAGAAATCCCTCTTAAGC +
Preference number: 4 (lower is better)
Translates to: MKETVSAEVLEAKDIEYLPGQES*KKSLLS
Trigger: GCTTAAGAGGGATTTCTTCCAGCTCTCTTGCCCTGG...GAGGTATTCAATATCCTTTGCCTCAAGGACTTCGGCAGATACTGTCTCTTTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR CCA 90 bp ATCCTGCACATTCTGATGTGTAAATTCCACGATAGGGCAAAAGCATGCCACTCCCTTGCATCTTGTGCCTaGAAAAGCTACAGACACTCA +
Preference number: 4 (lower is better)
Translates to: ILHILMCKFHDRAKACHSLASCA*KSYRHS
Trigger: TGAGTGTCTGTAGCTTTTCCAGGCACAAGATGCAAG...GGAGTGGCATGCTTTTGCCCTATCGTGGAATTTACACATCAGAATGTGCAGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR CCA 90 bp ACATCACCAGTCAATCCTGCTCAACAGGTAACTCTTGCAGCAATCCTTAAGGAACAAGGTGCCTTCCTCTaGATGCACTGTCTGTATACT +
Preference number: 4 (lower is better)
Translates to: TSPVNPAQQVTLAAILKEQGAFL*MHCLYT
Trigger: AGTATACAGACAGTGCATCCAGAGGAAGGCACCTTG...TTCCTTAAGGATTGCTGCAAGAGTTACCTGTTGAGCAGGATTGACTGGTGATGT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR CCA 90 bp GTATCTGCCGAAGTCCTTGAGGCAAAGGATATTGAATACCTCCAAAAGAAAGGCAGAACAGAGCAGCTTTaGTATCCTGTTCACAGCACC +
Preference number: 4 (lower is better)
Translates to: VSAEVLEAKDIEYLQKKGRTEQL*YPVHST
Trigger: GGTGCTGTGAACAGGATACCAAAGCTGCTCTGTTCT...GCCTTTCTTTTGGAGGTATTCAATATCCTTTGCCTCAAGGACTTCGGCAGATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453258.6
CDS-3UTR CCA 90 bp AGACAGTATCTGCCGAAGTCCTTGAGGCAAAGGATATTGAATACCTCCAAAAGAGGCTTGTCAGGTCCTTaGTTCCCTTCATTGCAGCTT +
Preference number: 4 (lower is better)
Translates to: RQYLPKSLRQRILNTSKRGLSGP*FPSLQL
Trigger: AAGCTGCAATGAAGGGAACCAAGGACCTGACAAGCC...TCTTTTGGAGGTATTCAATATCCTTTGCCTCAAGGACTTCGGCAGATACTGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453258.6
3UTR CAA 72 bp CCCTGTAACCCCTTTGTTTTGGCCAATTTCTCTCATTaGGAACAGCTGTATTTACCCAATACCTGTACCCCC +
Preference number: 4 (lower is better)
Translates to: PCNPFVLANFSH*EQLYLPNTCTP
Trigger: GGGGGTACAGGTATTGGGTAAATACAGCTGTTCCAAATGAGAGAAATTGGCCAAAACAAAGGGGTTACAGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371205.5
3UTR CAA 72 bp AGGGCAGTAACTGGTGTTGAAGAGCTCCAGGATGCTTaGATGGCATTGTTGATAGTTTCCAATACCCTGGAT +
Preference number: 4 (lower is better)
Translates to: RAVTGVEELQDA*MALLIVSNTLD
Trigger: ATCCAGGGTATTGGAAACTATCAACAATGCCATCAAAGCATCCTGGAGCTCTTCAACACCAGTTACTGCCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635076.1
ENST00000639992.1
CDS-3UTR TCA 90 bp GAGGCAAAGGATATTGAATACCTCCAAAAGAAAGGCTTCAGTAAAAGCCAAGGACTGCATTCTTCTACTTaGTGCACCACGCCTGTGTCA +
Preference number: 4 (lower is better)
Translates to: EAKDIEYLQKKGFSKSQGLHSST*CTTPVS
Trigger: TGACACAGGCGTGGTGCATCAAGTAGAAGAATGCAG...TCCTTGGCTTTTACTGAAGCCTTTCTTTTGGAGGTATTCAATATCCTTTGCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000639992.1
CDS-3UTR TCA 90 bp TGTAAAGGTCACTTACGTTCACTACCTTCTTATATCCAGGATGAAAGCATGGGTCTGCATTCTTCTACTTaGTGCACCACGCCTGTGTCA +
Preference number: 4 (lower is better)
Translates to: CKGHLRSLPSYIQDESMGLHSST*CTTPVS
Trigger: TGACACAGGCGTGGTGCATCAAGTAGAAGAATGCAG...ACCCATGCTTTCATCCTGGATATAAGAAGGTAGTGAACGTAAGTGACCTTTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483213.6
ENST00000639992.1
CDS-3UTR TCA 90 bp TGTAGGTACCAGAAAAGCAGTATTCACTCAGGTACTTCTCCTTTACTCCAGCGTAACCACCTTGTTTTCTaGCTGAATTTGCCCAGCAGA +
Preference number: 4 (lower is better)
Translates to: CRYQKSSIHSGTSPLLQRNHLVF*LNLPSR
Trigger: TCTGCTGGGCAAATTCAGTCAGAAAACAAGGTGGTT...ACGCTGGAGTAAAGGAGAAGTACCTGAGTGAATACTGCTTTTCTGGTACCTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635076.1
ENST00000639992.1
CDS-3UTR TCA 90 bp ACATCACCAGTCAATCCTGCTCAACAGGTAACTCTTGCAGCAATCCTTAAGGAACATATGGGACTATGCTaGACCACCTTGTTTTCTGAC +
Preference number: 4 (lower is better)
Translates to: TSPVNPAQQVTLAAILKEHMGLC*TTLFSD
Trigger: GTCAGAAAACAAGGTGGTTCAGCATAGTCCCATATG...TTCCTTAAGGATTGCTGCAAGAGTTACCTGTTGAGCAGGATTGACTGGTGATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR TCA 90 bp GTAGACATTGTAGTCCTTGCCATAGAGGCGAAATTGCAGAGCATTATCTGGGGAGCTCCAAAGGTTTCCTaGTTATTGGTTTCATATGGG +
Preference number: 4 (lower is better)
Translates to: VDIVVLAIEAKLQSIIWGAPKVS*LLVSYG
Trigger: CCCATATGAAACCAATAATCAGGAAACCTTTGGAGC...TCCCCAGATAATGCTCTGCAATTTCGCCTCTATGGCAAGGACTACAATGTCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000483213.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR TCA 90 bp CTCAAATCTCTTGGTGCAGGGGGTCTTGTAAAGGTCACTTACGTTCACTACCTTGCTCCAAAGGTTTCCTaGTTATTGGTTTCATATGGG +
Preference number: 4 (lower is better)
Translates to: LKSLGAGGLVKVTYVHYLAPKVS*LLVSYG
Trigger: CCCATATGAAACCAATAATCAGGAAACCTTTGGAGC...AAGGTAGTGAACGTAAGTGACCTTTACAAGACCCCCTGCACCAAGAGATTTGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635076.1
ENST00000639992.1
CDS-3UTR TCA 90 bp GTAGGTACCAGAAAAGCAGTATTCACTCAGGTACTTCTCCTTTACTCCAGCGTATCAGTCACCTTTTCCTaGGAGACTTTCTCTGATGTC +
Preference number: 4 (lower is better)
Translates to: VGTRKAVFTQVLLLYSSVSVTFS*ETFSDV
Trigger: GACATCAGAGAAAGTCTCTCAGGAAAAGGTGACTGA...TACGCTGGAGTAAAGGAGAAGTACCTGAGTGAATACTGCTTTTCTGGTACCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635076.1
ENST00000639992.1
CDS-3UTR TCA 90 bp ATGAAAGAGACAGTATCTGCCGAAGTCCTTGAGGCAAAGGATATTGAATACCTCATCTCCTCCCAAGGCTaGGCACAGAACTTTTTCATC +
Preference number: 4 (lower is better)
Translates to: MKETVSAEVLEAKDIEYLISSQG*AQNFFI
Trigger: GATGAAAAAGTTCTGTGCTCAGCCTTGGGAGGAGAT...GAGGTATTCAATATCCTTTGCCTCAAGGACTTCGGCAGATACTGTCTCTTTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR TCA 90 bp ATCTGCTTTTTGCAAATCTCAGGTCTGAGTGTTCCACTCTGTAGCATTTGGGTACCCAGGAATCAGCTGTaGAATGATAGCCTTGCAGAA +
Preference number: 4 (lower is better)
Translates to: ICFLQISGLSVPLCSIWVPRNQL*NDSLAE
Trigger: TTCTGCAAGGCTATCATTTCACAGCTGATTCCTGGG...TACCCAAATGCTACAGAGTGGAACACTCAGACCTGAGATTTGCAAAAAGCAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR TCA 90 bp GTATCTGCCGAAGTCCTTGAGGCAAAGGATATTGAATACCTCCAAAAGAAAGGCAGCCATTTGGGCAAATaGCTTAACCTCTCTGAACCT +
Preference number: 4 (lower is better)
Translates to: VSAEVLEAKDIEYLQKKGSHLGK*LNLSEP
Trigger: AGGTTCAGAGAGGTTAAGTCATTTGCCCAAATGGCT...GCCTTTCTTTTGGAGGTATTCAATATCCTTTGCCTCAAGGACTTCGGCAGATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR TCA 90 bp CCACCATTCCTGGTATCAGTCCAGGTAAAATATATTACAGCTCTTTACTGGAGCCTGCCTCCCTTTCTATaGATACCAAGTCCCATGAAC +
Preference number: 4 (lower is better)
Translates to: PPFLVSVQVKYITALYWSLPPFL*IPSPMN
Trigger: GTTCATGGGACTTGGTATTCATAGAAAGGGAGGCAG...GCTCCAGTAAAGAGCTGTAATATATTTTACCTGGACTGATACCAGGAATGGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR TCA 90 bp GACTTGCATGGACCCTGTAACCCCTTTGTTTTGGCCAATTTCTCTCATTTGGAATTTAAAGGATGCGTGTaGGCTGGCATAACCTACCTA +
Preference number: 4 (lower is better)
Translates to: DLHGPCNPFVLANFSHLEFKGCV*AGITYL
Trigger: TAGGTAGGTTATGCCAGCTCACACGCATCCTTTAAA...TTCCAAATGAGAGAAATTGGCCAAAACAAAGGGGTTACAGGGTCCATGCAAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR TCA 90 bp ACATCACCAGTCAATCCTGCTCAACAGGTAACTCTTGCAGCAATCCTTAAGGAAAGAGTGGGGCATTGCTaGAAAGATACCCGAAAATGT +
Preference number: 4 (lower is better)
Translates to: TSPVNPAQQVTLAAILKERVGHC*KDTRKC
Trigger: ACATTTTCGGGTATCTTTTCAGCAATGCCCCACTCT...TTCCTTAAGGATTGCTGCAAGAGTTACCTGTTGAGCAGGATTGACTGGTGATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR GCA 90 bp GCCATAGAGGCGAAATTGCAGAGCATTATCTGGGGACTCGATAGTCTGGTTTTGGAGAATTTCATTACTTaGAACCTGAATGTCCTTGGC +
Preference number: 4 (lower is better)
Translates to: AIEAKLQSIIWGLDSLVLENFIT*NLNVLG
Trigger: GCCAAGGACATTCAGGTTGCAAGTAATGAAATTCTC...CAAAACCAGACTATCGAGTCCCCAGATAATGCTCTGCAATTTCGCCTCTATGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000483213.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR GCA 90 bp GTAGGTACCAGAAAAGCAGTATTCACTCAGGTACTTCTCCTTTACTCCAGCGTATCTCAAATCTCTTGGTaGAGGGGGTCTTGTAAAGGT +
Preference number: 4 (lower is better)
Translates to: VGTRKAVFTQVLLLYSSVSQISW*RGSCKG
Trigger: ACCTTTACAAGACCCCCTGCACCAAGAGATTTGAGA...TACGCTGGAGTAAAGGAGAAGTACCTGAGTGAATACTGCTTTTCTGGTACCTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000635076.1
ENST00000639992.1
CDS-3UTR GCA 90 bp ATCCTGCACATTCTGATGTGTAAATTCCACGATAGGGCAAAAGCATGCCACTCCCTGATTAGCATCATATaGCAGATGTGCTTCCATCCA +
Preference number: 4 (lower is better)
Translates to: ILHILMCKFHDRAKACHSLISII*QMCFHP
Trigger: TGGATGGAAGCACATCTGGCATATGATGCTAATCAG...GGAGTGGCATGCTTTTGCCCTATCGTGGAATTTACACATCAGAATGTGCAGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR CCA 90 bp AATGTCCTTGGCCAGTTTCTGCCAGAGTGCCTGATCCTTCCCATAGCACAAGAAAGGTTTCCTGATTATTaGTTTCATATGGGACTATGC +
Preference number: 4 (lower is better)
Translates to: NVLGQFLPECLILPIAQERFPDY*FHMGLC
Trigger: GCATAGTCCCATATGAAACCAATAATCAGGAAACCT...TTCTTGTGCTATGGGAAGGATCAGGCACTCTGGCAGAAACTGGCCAAGGACATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000483213.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CCA 90 bp GCCGAAGTCCTTGAGGCAAAGGATATTGAATACCTCCAAAAGAAAGGCTTCAGTTTGCAGAGCATTATCTaGGGACTCGATAGTCTGGTT +
Preference number: 4 (lower is better)
Translates to: AEVLEAKDIEYLQKKGFSLQSII*GLDSLV
Trigger: AACCAGACTATCGAGTCCCCAGATAATGCTCTGCAA...ACTGAAGCCTTTCTTTTGGAGGTATTCAATATCCTTTGCCTCAAGGACTTCGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CCA 90 bp GAAGTCCTTGAGGCAAAGGATATTGAATACCTCCAAAAGAAAGGCTTCAGTAAAAGTGGGAGAGAGGTGTaGACAATGGTTGCTCAGCTG +
Preference number: 4 (lower is better)
Translates to: EVLEAKDIEYLQKKGFSKSGREV*TMVAQL
Trigger: CAGCTGAGCAACCATTGTCCACACCTCTCTCCCACT...TTTACTGAAGCCTTTCTTTTGGAGGTATTCAATATCCTTTGCCTCAAGGACTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CCA 90 bp AGTATAGGCAACTACCACAAGAAAGAATTTGAACATGTCCCAATTCGAATTTTGCACACTCGTCAAGACTaGCCCTGGCAGACAGGGAAG +
Preference number: 4 (lower is better)
Translates to: SIGNYHKKEFEHVPIRILHTRQD*PWQTGK
Trigger: CTTCCCTGTCTGCCAGGGCCAGTCTTGACGAGTGTG...CAAAATTCGAATTGGGACATGTTCAAATTCTTTCTTGTGGTAGTTGCCTATACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR CCA 90 bp GAAACATCACCAGTCAATCCTGCTCAACAGGTAACTCTTGCAGCAATCCTTAAGGAGGATTATGAAATTTaGAGGAGCCCAGGGAGGAAT +
Preference number: 4 (lower is better)
Translates to: ETSPVNPAQQVTLAAILKEDYEI*RSPGRN
Trigger: ATTCCTCCCTGGGCTCCTCCAAATTTCATAATCCTC...CTTAAGGATTGCTGCAAGAGTTACCTGTTGAGCAGGATTGACTGGTGATGTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371205.5
3UTR CAA 72 bp ACTGGATTTCAGACTTGCATGGACCCTGTAACCCCTTaGTTTTGGCCAATTTCTCTCATTTGGAACAGCTGT +
Preference number: 4 (lower is better)
Translates to: TGFQTCMDPVTP*FWPISLIWNSC
Trigger: ACAGCTGTTCCAAATGAGAGAAATTGGCCAAAACAAAGGGGTTACAGGGTCCATGCAAGTCTGAAATCCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371205.5
3UTR CAA 72 bp GTGATGTTGAGCCTGTGGGTGCAGAGATGTCAAGAATaGAGATTTGGGAACCTCTGCCTAGATTTCAGAATA +
Preference number: 4 (lower is better)
Translates to: VMLSLWVQRCQE*RFGNLCLDFRI
Trigger: TATTCTGAAATCTAGGCAGAGGTTCCCAAATCTCAATTCTTGACATCTCTGCACCCACAGGCTCAACATCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371205.5
3UTR CAA 72 bp GGTGTTGAAGAGCTCCAGGATGCTTTGATGGCATTGTaGATAGTTTCCAATACCCTGGATTTCAAACTGCTG +
Preference number: 4 (lower is better)
Translates to: GVEELQDALMAL*IVSNTLDFKLL
Trigger: CAGCAGTTTGAAATCCAGGGTATTGGAAACTATCAACAATGCCATCAAAGCATCCTGGAGCTCTTCAACACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635076.1
ENST00000639992.1
CDS-3UTR TCA 90 bp ATGAAAGAGACAGTATCTGCCGAAGTCCTTGAGGCAAAGGATATTGAATACCTCCATATGGGACTATGCTaGACCACCTTGTTTTCTGAC +
Preference number: 4 (lower is better)
Translates to: MKETVSAEVLEAKDIEYLHMGLC*TTLFSD
Trigger: GTCAGAAAACAAGGTGGTTCAGCATAGTCCCATATG...GAGGTATTCAATATCCTTTGCCTCAAGGACTTCGGCAGATACTGTCTCTTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR TCA 90 bp ACATCACCAGTCAATCCTGCTCAACAGGTAACTCTTGCAGCAATCCTTAAGGAAGAAAGCATGGGTCCCTaGGAATTTCATTACTTGCAA +
Preference number: 4 (lower is better)
Translates to: TSPVNPAQQVTLAAILKEESMGP*EFHYLQ
Trigger: TTGCAAGTAATGAAATTCTCAGGGACCCATGCTTTC...TTCCTTAAGGATTGCTGCAAGAGTTACCTGTTGAGCAGGATTGACTGGTGATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR TCA 90 bp GAAGTCCTTGAGGCAAAGGATATTGAATACCTCCAAAAGAAAGGCTTCAGTAAAGGCAGTAACTGGTGTTaGAGAGCTCCAGGATGCTTT +
Preference number: 4 (lower is better)
Translates to: EVLEAKDIEYLQKKGFSKGSNWC*RAPGCF
Trigger: AAAGCATCCTGGAGCTCTTCAACACCAGTTACTGCC...TTTACTGAAGCCTTTCTTTTGGAGGTATTCAATATCCTTTGCCTCAAGGACTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR TCA 90 bp GAGGCAAAGGATATTGAATACCTCCAAAAGAAAGGCTTCAGTAAAAGCCAAGGAGGGAGAATAGAACCATaGGGAAGACATAGGTGGAGT +
Preference number: 4 (lower is better)
Translates to: EAKDIEYLQKKGFSKSQGGRIEP*GRHRWS
Trigger: ACTCCACCTATGTCTTCCTCATGGTTCTATTCTCCC...TCCTTGGCTTTTACTGAAGCCTTTCTTTTGGAGGTATTCAATATCCTTTGCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR TCA 90 bp AAGTCCTTGAGGCAAAGGATATTGAATACCTCCAAAAGAAAGGCTTCAGTAAAAAGGGAAGGATGGCCTTaGACACTGCGATGGAGGAAA +
Preference number: 4 (lower is better)
Translates to: KSLRQRILNTSKRKASVKREGWP*TLRWRK
Trigger: TTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCT...TTTTACTGAAGCCTTTCTTTTGGAGGTATTCAATATCCTTTGCCTCAAGGACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR TCA 90 bp TTGAGGCAAAGGATATTGAATACCTCCAAAAGAAAGGCTTCAGTAAAAGCCAAGGCTACAAGCCACATGTaGGGTGAACACACAGCTAGT +
Preference number: 4 (lower is better)
Translates to: LRQRILNTSKRKASVKAKATSHM*GEHTAS
Trigger: ACTAGCTGTGTGTTCACCTCACATGTGGCTTGTAGC...CTTGGCTTTTACTGAAGCCTTTCTTTTGGAGGTATTCAATATCCTTTGCCTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR TCA 90 bp CTGTTATTAGAATGGCCTGTCCAGAAGACAGCCAAATACATCCTTCAAACAGACAAGGGGCATTTGAAATaGGCTTTGAAGGTGCAAGAG +
Preference number: 4 (lower is better)
Translates to: LLLEWPVQKTAKYILQTDKGHLK*ALKVQE
Trigger: CTCTTGCACCTTCAAAGCTCATTTCAAATGCCCCTT...GTCTGTTTGAAGGATGTATTTGGCTGTCTTCTGGACAGGCCATTCTAATAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR TCA 90 bp ATCTGCTTTTTGCAAATCTCAGGTCTGAGTGTTCCACTCTGTAGCATTTGGGTATTTGGAACTGGGTGTTaGAATAATCTGGAGGGCTCA +
Preference number: 4 (lower is better)
Translates to: ICFLQISGLSVPLCSIWVFGTGC*NNLEGS
Trigger: TGAGCCCTCCAGATTATTTCAACACCCAGTTCCAAA...TACCCAAATGCTACAGAGTGGAACACTCAGACCTGAGATTTGCAAAAAGCAGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR GCA 90 bp AGACAGTATCTGCCGAAGTCCTTGAGGCAAAGGATATTGAATACCTCCAAAAGAAACGTTTTCTGGCAATaGTTTGTTCTGGGTCAACCC +
Preference number: 4 (lower is better)
Translates to: RQYLPKSLRQRILNTSKRNVFWQ*FVLGQP
Trigger: GGGTTGACCCAGAACAAAGCATTGCCAGAAAACGTT...TCTTTTGGAGGTATTCAATATCCTTTGCCTCAAGGACTTCGGCAGATACTGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR GCA 90 bp AAGTCCTTGAGGCAAAGGATATTGAATACCTCCAAAAGAAAGGCTTCAGTAAAAACGGGTGTCTCTTGGTaGTGGGACCTTGGAATCACT +
Preference number: 4 (lower is better)
Translates to: KSLRQRILNTSKRKASVKTGVSW*WDLGIT
Trigger: AGTGATTCCAAGGTCCCAGCACCAAGAGACACCCGT...TTTTACTGAAGCCTTTCTTTTGGAGGTATTCAATATCCTTTGCCTCAAGGACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
CDS-3UTR GCA 90 bp TTGAGGCAAAGGATATTGAATACCTCCAAAAGAAAGGCTTCAGTAAAAGCCAAGGGTGTGGACAATGGTTaGTCAGCTGGGATCATGTTG +
Preference number: 4 (lower is better)
Translates to: LRQRILNTSKRKASVKAKGVDNG*SAGIML
Trigger: CAACATGATCCCAGCTGAGCAACCATTGTCCACACC...CTTGGCTTTTACTGAAGCCTTTCTTTTGGAGGTATTCAATATCCTTTGCCTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR GCA 90 bp GAAACATCACCAGTCAATCCTGCTCAACAGGTAACTCTTGCAGCAATCCTTAAGAAGATCTATGGTTTCTaGCTACCCAGGATAGTCTTG +
Preference number: 4 (lower is better)
Translates to: ETSPVNPAQQVTLAAILKKIYGF*LPRIVL
Trigger: CAAGACTATCCTGGGTAGGCAGAAACCATAGATCTT...CTTAAGGATTGCTGCAAGAGTTACCTGTTGAGCAGGATTGACTGGTGATGTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR GCA 90 bp CCACCATTCCTGGTATCAGTCCAGGTAAAATATATTACAGCTCTTTACTGGAGCATCACCAGTCAATCCTaGTCAACAGGTAACTCTTGC +
Preference number: 4 (lower is better)
Translates to: PPFLVSVQVKYITALYWSITSQS*STGNSC
Trigger: GCAAGAGTTACCTGTTGAGCAGGATTGACTGGTGAT...GCTCCAGTAAAGAGCTGTAATATATTTTACCTGGACTGATACCAGGAATGGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR GCA 90 bp ACATCACCAGTCAATCCTGCTCAACAGGTAACTCTTGCAGCAATCCTTAAGGAAATCATATGCCAGATGTaGTTCCATCCAAAGCACATG +
Preference number: 4 (lower is better)
Translates to: TSPVNPAQQVTLAAILKEIICQM*FHPKHM
Trigger: CATGTGCTTTGGATGGAAGCACATCTGGCATATGAT...TTCCTTAAGGATTGCTGCAAGAGTTACCTGTTGAGCAGGATTGACTGGTGATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR GCA 90 bp ATGAAAGAGACAGTATCTGCCGAAGTCCTTGAGGCAAAGGATATTGAATACCTCGATCAACCACCAACTTaGATCTTGTGCCTGGAAAAG +
Preference number: 4 (lower is better)
Translates to: MKETVSAEVLEAKDIEYLDQPPT*ILCLEK
Trigger: CTTTTCCAGGCACAAGATGCAAGTTGGTGGTTGATC...GAGGTATTCAATATCCTTTGCCTCAAGGACTTCGGCAGATACTGTCTCTTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR CCA 90 bp GTAGACATTGTAGTCCTTGCCATAGAGGCGAAATTGCAGAGCATTATCTGGGGATCGATAGTCTGGTTTTaGGGTACAAAAGTGACTTGT +
Preference number: 4 (lower is better)
Translates to: VDIVVLAIEAKLQSIIWGSIVWF*GTKVTC
Trigger: ACAAGTCACTTTTGTACCCCAAAACCAGACTATCGA...TCCCCAGATAATGCTCTGCAATTTCGCCTCTATGGCAAGGACTACAATGTCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000483213.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CCA 90 bp GCCGAAGTCCTTGAGGCAAAGGATATTGAATACCTCCAAAAGAAAGGCTTCAGTTCATCTCAAATCTCTTaGTGCAGGGGGTCTTGTAAA +
Preference number: 4 (lower is better)
Translates to: AEVLEAKDIEYLQKKGFSSSQIS*CRGSCK
Trigger: TTTACAAGACCCCCTGCACCAAGAGATTTGAGATGA...ACTGAAGCCTTTCTTTTGGAGGTATTCAATATCCTTTGCCTCAAGGACTTCGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CCA 90 bp GAAGTCCTTGAGGCAAAGGATATTGAATACCTCCAAAAGAAAGGCTTCAGTAAAAGGAAGCCAGGGGTATaGGAACCACTGATTAGCATC +
Preference number: 4 (lower is better)
Translates to: EVLEAKDIEYLQKKGFSKRKPGV*EPLISI
Trigger: GATGCTAATCAGTGGTTCCCATACCCCTGGCTTCCT...TTTACTGAAGCCTTTCTTTTGGAGGTATTCAATATCCTTTGCCTCAAGGACTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR CCA 90 bp TTTGGGTATCACCTAGGAATATGTGATTTATTGACATACCTGCTTTGGGTGGGACAACCTGAGTGGTGTTaGGTGAACAGTCATTCTACC +
Preference number: 4 (lower is better)
Translates to: FGYHLGICDLLTYLLWVGQPEWC*VNSHST
Trigger: GGTAGAATGACTGTTCACCCAACACCACTCAGGTTG...TCCCACCCAAAGCAGGTATGTCAATAAATCACATATTCCTAGGTGATACCCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR CCA 90 bp CTATGGTTTCTGCCTACCCAGGATAGTCTTGTCTCTAGACAATGTATTGATGATAGCTGCACAAGACCATaGGAACCTATCTCTTGCATC +
Preference number: 4 (lower is better)
Translates to: LWFLPTQDSLVSRQCIDDSCTRP*EPISCI
Trigger: GATGCAAGAGATAGGTTCCCATGGTCTTGTGCAGCT...ATCATCAATACATTGTCTAGAGACAAGACTATCCTGGGTAGGCAGAAACCATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR TCA 90 bp AAGTCCTTGAGGCAAAGGATATTGAATACCTCCAAAAGAAAGGCTTCAGTAAAACTGCATTCTTCTACTTaGTGCACCACGCCTGTGTCA +
Preference number: 4 (lower is better)
Translates to: KSLRQRILNTSKRKASVKLHSST*CTTPVS
Trigger: TGACACAGGCGTGGTGCATCAAGTAGAAGAATGCAG...TTTTACTGAAGCCTTTCTTTTGGAGGTATTCAATATCCTTTGCCTCAAGGACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000639992.1
CDS-3UTR TCA 90 bp GAGGCAAAGGATATTGAATACCTCCAAAAGAAAGGCTTCAGTAAAAGCCAAGGAAACCACCTTGTTTTCTaGCTGAATTTGCCCAGCAGA +
Preference number: 4 (lower is better)
Translates to: EAKDIEYLQKKGFSKSQGNHLVF*LNLPSR
Trigger: TCTGCTGGGCAAATTCAGTCAGAAAACAAGGTGGTT...TCCTTGGCTTTTACTGAAGCCTTTCTTTTGGAGGTATTCAATATCCTTTGCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR TCA 90 bp GAGGCAAAGGATATTGAATACCTCCAAAAGAAAGGCTTCAGTAAAAGCCAAGGACATATGGGACTATGCTaGACCACCTTGTTTTCTGAC +
Preference number: 4 (lower is better)
Translates to: EAKDIEYLQKKGFSKSQGHMGLC*TTLFSD
Trigger: GTCAGAAAACAAGGTGGTTCAGCATAGTCCCATATG...TCCTTGGCTTTTACTGAAGCCTTTCTTTTGGAGGTATTCAATATCCTTTGCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR TCA 90 bp ATGAAAGAGACAGTATCTGCCGAAGTCCTTGAGGCAAAGGATATTGAATACCTCGAAAGCATGGGTCCCTaGGAATTTCATTACTTGCAA +
Preference number: 4 (lower is better)
Translates to: MKETVSAEVLEAKDIEYLESMGP*EFHYLQ
Trigger: TTGCAAGTAATGAAATTCTCAGGGACCCATGCTTTC...GAGGTATTCAATATCCTTTGCCTCAAGGACTTCGGCAGATACTGTCTCTTTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR TCA 90 bp TGTAAAGGTCACTTACGTTCACTACCTTCTTATATCCAGGATGAAAGCATGGGTTCAGTCACCTTTTCCTaGGAGACTTTCTCTGATGTC +
Preference number: 4 (lower is better)
Translates to: CKGHLRSLPSYIQDESMGSVTFS*ETFSDV
Trigger: GACATCAGAGAAAGTCTCTCAGGAAAAGGTGACTGA...ACCCATGCTTTCATCCTGGATATAAGAAGGTAGTGAACGTAAGTGACCTTTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635076.1
ENST00000639992.1
CDS-3UTR TCA 90 bp ACTTTTTCATCATCTCAGTCACCTTTTCCTGAGAGACTTTCTCTGATGTCAAGTATCTCCTCCCAAGGCTaGGCACAGAACTTTTTCATC +
Preference number: 4 (lower is better)
Translates to: TFSSSQSPFPERLSLMSSISSQG*AQNFFI
Trigger: GATGAAAAAGTTCTGTGCTCAGCCTTGGGAGGAGAT...ACTTGACATCAGAGAAAGTCTCTCAGGAAAAGGTGACTGAGATGATGAAAAAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000635076.1
ENST00000639992.1
CDS-3UTR GCA 90 bp ACCAGAAAAGCAGTATTCACTCAGGTACTTCTCCTTTACTCCAGCGTAAGATGTAGACATTGTAGTCCTTaGCATAGAGGCGAAATTGCA +
Preference number: 4 (lower is better)
Translates to: TRKAVFTQVLLLYSSVRCRHCSP*HRGEIA
Trigger: TGCAATTTCGCCTCTATGGCAAGGACTACAATGTCT...ACATCTTACGCTGGAGTAAAGGAGAAGTACCTGAGTGAATACTGCTTTTCTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635076.1
ENST00000639992.1
CDS-3UTR GCA 90 bp GCCATAGAGGCGAAATTGCAGAGCATTATCTGGGGACTCGATAGTCTGGTTTTGTATTTCAGCTGCTTTTaGTATACCATATCTTTCCAG +
Preference number: 4 (lower is better)
Translates to: AIEAKLQSIIWGLDSLVLYFSCF*YTISFQ
Trigger: CTGGAAAGATATGGTATAGCAAAAGCAGCTGAAATA...CAAAACCAGACTATCGAGTCCCCAGATAATGCTCTGCAATTTCGCCTCTATGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000635076.1
ENST00000639992.1
CDS-3UTR GCA 90 bp ATCTGCTTTTTGCAAATCTCAGGTCTGAGTGTTCCACTCTGTAGCATTTGGGTAATCATATGCCAGATGTaGTTCCATCCAAAGCACATG +
Preference number: 4 (lower is better)
Translates to: ICFLQISGLSVPLCSIWVIICQM*FHPKHM
Trigger: CATGTGCTTTGGATGGAAGCACATCTGGCATATGAT...TACCCAAATGCTACAGAGTGGAACACTCAGACCTGAGATTTGCAAAAAGCAGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR GCA 90 bp TTTGGGTATCACCTAGGAATATGTGATTTATTGACATACCTGCTTTGGGTGGGATCAAACAGACTTCACTaGAGGAGACAGAGTGGATTC +
Preference number: 4 (lower is better)
Translates to: FGYHLGICDLLTYLLWVGSNRLH*RRQSGF
Trigger: GAATCCACTCTGTCTCCTGCAGTGAAGTCTGTTTGA...TCCCACCCAAAGCAGGTATGTCAATAAATCACATATTCCTAGGTGATACCCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR CCA 90 bp TGTAGACATTGTAGTCCTTGCCATAGAGGCGAAATTGCAGAGCATTATCTGGGGATTATTGGTTTCATATaGGACTATGCTGAACCACCT +
Preference number: 4 (lower is better)
Translates to: CRHCSPCHRGEIAEHYLGIIGFI*DYAEPP
Trigger: AGGTGGTTCAGCATAGTCCCATATGAAACCAATAAT...CCCCAGATAATGCTCTGCAATTTCGCCTCTATGGCAAGGACTACAATGTCTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000483213.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CCA 90 bp TGTAGGTACCAGAAAAGCAGTATTCACTCAGGTACTTCTCCTTTACTCCAGCGTTGGATTTCAAACTGCTaGAATGGAAGAGTCATCTCA +
Preference number: 4 (lower is better)
Translates to: CRYQKSSIHSGTSPLLQRWISNC*NGRVIS
Trigger: TGAGATGACTCTTCCATTCCAGCAGTTTGAAATCCA...ACGCTGGAGTAAAGGAGAAGTACCTGAGTGAATACTGCTTTTCTGGTACCTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CCA 90 bp AAGTCCTTGAGGCAAAGGATATTGAATACCTCCAAAAGAAAGGCTTCAGTAAAAAGGAAGCCAGGGGTATaGGAACCACTGATTAGCATC +
Preference number: 4 (lower is better)
Translates to: KSLRQRILNTSKRKASVKRKPGV*EPLISI
Trigger: GATGCTAATCAGTGGTTCCCATACCCCTGGCTTCCT...TTTTACTGAAGCCTTTCTTTTGGAGGTATTCAATATCCTTTGCCTCAAGGACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR CCA 90 bp TTGAGGCAAAGGATATTGAATACCTCCAAAAGAAAGGCTTCAGTAAAAGCCAAGCTAGCAGCAACAGATTaGAAGCAACACCACCATTCC +
Preference number: 4 (lower is better)
Translates to: LRQRILNTSKRKASVKAKLAATD*KQHHHS
Trigger: GGAATGGTGGTGTTGCTTCCAATCTGTTGCTGCTAG...CTTGGCTTTTACTGAAGCCTTTCTTTTGGAGGTATTCAATATCCTTTGCCTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR CCA 90 bp ATGAAAGAGACAGTATCTGCCGAAGTCCTTGAGGCAAAGGATATTGAATACCTCTCCCACAAGATCTGGTaGGTTTATGAAGAGTTTCTG +
Preference number: 4 (lower is better)
Translates to: MKETVSAEVLEAKDIEYLSHKIW*VYEEFL
Trigger: CAGAAACTCTTCATAAACCCACCAGATCTTGTGGGA...GAGGTATTCAATATCCTTTGCCTCAAGGACTTCGGCAGATACTGTCTCTTTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR CCA 90 bp GTATCTGCCGAAGTCCTTGAGGCAAAGGATATTGAATACCTCCAAAAGAAAGGCACTTTGGGGAACTGTTaGGAAGGAATGATTGGTTTT +
Preference number: 4 (lower is better)
Translates to: VSAEVLEAKDIEYLQKKGTLGNC*EGMIGF
Trigger: AAAACCAATCATTCCTTCCCAACAGTTCCCCAAAGT...GCCTTTCTTTTGGAGGTATTCAATATCCTTTGCCTCAAGGACTTCGGCAGATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR CCA 90 bp ACATCACCAGTCAATCCTGCTCAACAGGTAACTCTTGCAGCAATCCTTAAGGAACCTGAATGTGAGACATaGAGTCAAAGGAGATCATTA +
Preference number: 4 (lower is better)
Translates to: TSPVNPAQQVTLAAILKEPECET*SQRRSL
Trigger: TAATGATCTCCTTTGACTCCATGTCTCACATTCAGG...TTCCTTAAGGATTGCTGCAAGAGTTACCTGTTGAGCAGGATTGACTGGTGATGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR CCA 90 bp ATGCCAGATGTGCTTCCATCCAAAGCACATGAACAGAATGATATTAAATTACAACAGCTGCTCCAGCCATaGCTGAAAGGAGCCAACATA +
Preference number: 4 (lower is better)
Translates to: MPDVLPSKAHEQNDIKLQQLLQP*LKGANI
Trigger: TATGTTGGCTCCTTTCAGCCATGGCTGGAGCAGCTG...TTGTAATTTAATATCATTCTGTTCATGTGCTTTGGATGGAAGCACATCTGGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR TCA 90 bp TCATCATCTCAGTCACCTTTTCCTGAGAGACTTTCTCTGATGTCAAGTTTAAAAGCAAGAAAATCCCATTaGAGGCACACTGGGAGTAAG +
Preference number: 4 (lower is better)
Translates to: SSSQSPFPERLSLMSSLKARKSH*RHTGSK
Trigger: CTTACTCCCAGTGTGCCTTCAATGGGATTTTCTTGC...TTTTAAACTTGACATCAGAGAAAGTCTCTCAGGAAAAGGTGACTGAGATGATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000635076.1
ENST00000639992.1
CDS-3UTR TCA 90 bp ATGAAAGAGACAGTATCTGCCGAAGTCCTTGAGGCAAAGGATATTGAATACCTCGAATATGTGATTTATTaGCATACCTGCTTTGGGTGG +
Preference number: 4 (lower is better)
Translates to: MKETVSAEVLEAKDIEYLEYVIY*HTCFGW
Trigger: CCACCCAAAGCAGGTATGTCAATAAATCACATATTC...GAGGTATTCAATATCCTTTGCCTCAAGGACTTCGGCAGATACTGTCTCTTTCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR TCA 90 bp GAAACATCACCAGTCAATCCTGCTCAACAGGTAACTCTTGCAGCAATCCTTAAGGGCTTTAAAACTCAGTaGACTATCTTTATGGTACAG +
Preference number: 4 (lower is better)
Translates to: ETSPVNPAQQVTLAAILKGFKTQ*TIFMVQ
Trigger: CTGTACCATAAAGATAGTTCACTGAGTTTTAAAGCC...CTTAAGGATTGCTGCAAGAGTTACCTGTTGAGCAGGATTGACTGGTGATGTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR TCA 90 bp CTATGGTTTCTGCCTACCCAGGATAGTCTTGTCTCTAGACAATGTATTGATGATGGATCCTGCACATTCTaGTGTGTAAATTCCACGATA +
Preference number: 4 (lower is better)
Translates to: LWFLPTQDSLVSRQCIDDGSCTF*CVNSTI
Trigger: TATCGTGGAATTTACACATCAGAATGTGCAGGATCC...ATCATCAATACATTGTCTAGAGACAAGACTATCCTGGGTAGGCAGAAACCATAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR TCA 90 bp ATGAAAGAGACAGTATCTGCCGAAGTCCTTGAGGCAAAGGATATTGAATACCTCGATTTAGTTGCTTTCTaGAAACTCTCCTGTGTTACC +
Preference number: 4 (lower is better)
Translates to: MKETVSAEVLEAKDIEYLDLVAF*KLSCVT
Trigger: GGTAACACAGGAGAGTTTTCAGAAAGCAACTAAATC...GAGGTATTCAATATCCTTTGCCTCAAGGACTTCGGCAGATACTGTCTCTTTCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR TCA 90 bp CTATGGTTTCTGCCTACCCAGGATAGTCTTGTCTCTAGACAATGTATTGATGATCCAGACCAGTTTGGGTaGAACTCAGTTCATCTTTTA +
Preference number: 4 (lower is better)
Translates to: LWFLPTQDSLVSRQCIDDPDQFG*NSVHLL
Trigger: TAAAAGATGAACTGAGTTTCACCCAAACTGGTCTGG...ATCATCAATACATTGTCTAGAGACAAGACTATCCTGGGTAGGCAGAAACCATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR TCA 90 bp ATGCCAGATGTGCTTCCATCCAAAGCACATGAACAGAATGATATTAAATTACAAGGTCTCAGATGGAGATaGAGACCTTGTTGGGAACTG +
Preference number: 4 (lower is better)
Translates to: MPDVLPSKAHEQNDIKLQGLRWR*RPCWEL
Trigger: CAGTTCCCAACAAGGTCTTCATCTCCATCTGAGACC...TTGTAATTTAATATCATTCTGTTCATGTGCTTTGGATGGAAGCACATCTGGCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR GCA 90 bp TTTGGGTATCACCTAGGAATATGTGATTTATTGACATACCTGCTTTGGGTGGGAAGACATTGTAGTCCTTaGCATAGAGGCGAAATTGCA +
Preference number: 4 (lower is better)
Translates to: FGYHLGICDLLTYLLWVGRHCSP*HRGEIA
Trigger: TGCAATTTCGCCTCTATGGCAAGGACTACAATGTCT...TCCCACCCAAAGCAGGTATGTCAATAAATCACATATTCCTAGGTGATACCCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR GCA 90 bp GAAGTCCTTGAGGCAAAGGATATTGAATACCTCCAAAAGAAAGGCTTCAGTAAATCTCAAATCTCTTGGTaGAGGGGGTCTTGTAAAGGT +
Preference number: 4 (lower is better)
Translates to: EVLEAKDIEYLQKKGFSKSQISW*RGSCKG
Trigger: ACCTTTACAAGACCCCCTGCACCAAGAGATTTGAGA...TTTACTGAAGCCTTTCTTTTGGAGGTATTCAATATCCTTTGCCTCAAGGACTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR GCA 90 bp ACATCACCAGTCAATCCTGCTCAACAGGTAACTCTTGCAGCAATCCTTAAGGAAATGTGGAGTTTTAAGTaGATGCTTGGAAGTTATGAG +
Preference number: 4 (lower is better)
Translates to: TSPVNPAQQVTLAAILKEMWSFK*MLGSYE
Trigger: CTCATAACTTCCAAGCATGCACTTAAAACTCCACAT...TTCCTTAAGGATTGCTGCAAGAGTTACCTGTTGAGCAGGATTGACTGGTGATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR GCA 90 bp GTATCTGCCGAAGTCCTTGAGGCAAAGGATATTGAATACCTCCAAAAGAAAGGCATGTGGAGTTTTAAGTaGATGCTTGGAAGTTATGAG +
Preference number: 4 (lower is better)
Translates to: VSAEVLEAKDIEYLQKKGMWSFK*MLGSYE
Trigger: CTCATAACTTCCAAGCATGCACTTAAAACTCCACAT...GCCTTTCTTTTGGAGGTATTCAATATCCTTTGCCTCAAGGACTTCGGCAGATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR GCA 90 bp TTTGGGTATCACCTAGGAATATGTGATTTATTGACATACCTGCTTTGGGTGGGATTGGAGTATCTGCTCTaGCATGTAGTAGTTTGTGTG +
Preference number: 4 (lower is better)
Translates to: FGYHLGICDLLTYLLWVGLEYLL*HVVVCV
Trigger: CACACAAACTACTACATGGCAGAGCAGATACTCCAA...TCCCACCCAAAGCAGGTATGTCAATAAATCACATATTCCTAGGTGATACCCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR GCA 90 bp AGTATAGGCAACTACCACAAGAAAGAATTTGAACATGTCCCAATTCGAATTTTGGCTGCCCAGCTGGCTTaGAGACTCACAAACATGAAA +
Preference number: 4 (lower is better)
Translates to: SIGNYHKKEFEHVPIRILAAQLA*RLTNMK
Trigger: TTTCATGTTTGTGAGTCTGCAAGCCAGCTGGGCAGC...CAAAATTCGAATTGGGACATGTTCAAATTCTTTCTTGTGGTAGTTGCCTATACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR GCA 90 bp CCACCATTCCTGGTATCAGTCCAGGTAAAATATATTACAGCTCTTTACTGGAGCATGTGTACAATGAAGTaGTGCATGGCAAACTACACA +
Preference number: 4 (lower is better)
Translates to: PPFLVSVQVKYITALYWSMCTMK*CMANYT
Trigger: TGTGTAGTTTGCCATGCAGCACTTCATTGTACACAT...GCTCCAGTAAAGAGCTGTAATATATTTTACCTGGACTGATACCAGGAATGGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR CCA 90 bp GAAACATCACCAGTCAATCCTGCTCAACAGGTAACTCTTGCAGCAATCCTTAAGATTATTGGTTTCATATaGGACTATGCTGAACCACCT +
Preference number: 4 (lower is better)
Translates to: ETSPVNPAQQVTLAAILKIIGFI*DYAEPP
Trigger: AGGTGGTTCAGCATAGTCCCATATGAAACCAATAAT...CTTAAGGATTGCTGCAAGAGTTACCTGTTGAGCAGGATTGACTGGTGATGTTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR CCA 90 bp TGTAGGTACCAGAAAAGCAGTATTCACTCAGGTACTTCTCCTTTACTCCAGCGTATTATTGGTTTCATATaGGACTATGCTGAACCACCT +
Preference number: 4 (lower is better)
Translates to: CRYQKSSIHSGTSPLLQRIIGFI*DYAEPP
Trigger: AGGTGGTTCAGCATAGTCCCATATGAAACCAATAAT...ACGCTGGAGTAAAGGAGAAGTACCTGAGTGAATACTGCTTTTCTGGTACCTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CCA 90 bp TACCAGAAAAGCAGTATTCACTCAGGTACTTCTCCTTTACTCCAGCGTAAGATGTCGATAGTCTGGTTTTaGGGTACAAAAGTGACTTGT +
Preference number: 4 (lower is better)
Translates to: YQKSSIHSGTSPLLQRKMSIVWF*GTKVTC
Trigger: ACAAGTCACTTTTGTACCCCAAAACCAGACTATCGA...CATCTTACGCTGGAGTAAAGGAGAAGTACCTGAGTGAATACTGCTTTTCTGGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CCA 90 bp ATCTGCTTTTTGCAAATCTCAGGTCTGAGTGTTCCACTCTGTAGCATTTGGGTATGGATTTCAAACTGCTaGAATGGAAGAGTCATCTCA +
Preference number: 4 (lower is better)
Translates to: ICFLQISGLSVPLCSIWVWISNC*NGRVIS
Trigger: TGAGATGACTCTTCCATTCCAGCAGTTTGAAATCCA...TACCCAAATGCTACAGAGTGGAACACTCAGACCTGAGATTTGCAAAAAGCAGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR CCA 90 bp ATGCCAGATGTGCTTCCATCCAAAGCACATGAACAGAATGATATTAAATTACAAGAGAGGTGTGGACAATaGTTGCTCAGCTGGGATCAT +
Preference number: 4 (lower is better)
Translates to: MPDVLPSKAHEQNDIKLQERCGQ*LLSWDH
Trigger: ATGATCCCAGCTGAGCAACCATTGTCCACACCTCTC...TTGTAATTTAATATCATTCTGTTCATGTGCTTTGGATGGAAGCACATCTGGCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR CCA 90 bp TTTGGGTATCACCTAGGAATATGTGATTTATTGACATACCTGCTTTGGGTGGGATATGAGGAGACAGCCTaGTATGTTCGGGAAAGAAAA +
Preference number: 4 (lower is better)
Translates to: FGYHLGICDLLTYLLWVGYEETA*YVRERK
Trigger: TTTTCTTTCCCGAACATACCAGGCTGTCTCCTCATA...TCCCACCCAAAGCAGGTATGTCAATAAATCACATATTCCTAGGTGATACCCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR CCA 90 bp AAGTCCTTGAGGCAAAGGATATTGAATACCTCCAAAAGAAAGGCTTCAGTAAAACCAGAAGACATGAGTTaGAGTATCTGCTCTGCCATG +
Preference number: 4 (lower is better)
Translates to: KSLRQRILNTSKRKASVKPEDMS*SICSAM
Trigger: CATGGCAGAGCAGATACTCCAACTCATGTCTTCTGG...TTTTACTGAAGCCTTTCTTTTGGAGGTATTCAATATCCTTTGCCTCAAGGACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR CCA 90 bp GGCAACTACCACAAGAAAGAATTTGAACATGTCCCAATTCGAATTTTGATTCCTCCAGAAGACATGAGTTaGAGTATCTGCTCTGCCATG +
Preference number: 4 (lower is better)
Translates to: GNYHKKEFEHVPIRILIPPEDMS*SICSAM
Trigger: CATGGCAGAGCAGATACTCCAACTCATGTCTTCTGG...AGGAATCAAAATTCGAATTGGGACATGTTCAAATTCTTTCTTGTGGTAGTTGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR CCA 90 bp CTTTGTTTTGGCCAATTTCTCTCATTTGGAACAGCTGTATTTACCCAATACCTGATCCCTAGAAACCACTaGACAAGGAGAACAAGAGGT +
Preference number: 4 (lower is better)
Translates to: LCFGQFLSFGTAVFTQYLIPRNH*TRRTRG
Trigger: ACCTCTTGTTCTCCTTGTCCAGTGGTTTCTAGGGAT...CAGGTATTGGGTAAATACAGCTGTTCCAAATGAGAGAAATTGGCCAAAACAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR CCA 90 bp ATCCTGCACATTCTGATGTGTAAATTCCACGATAGGGCAAAAGCATGCCACTCCAAATACATAGATGTATaGTTTCCTAGGACATCTACC +
Preference number: 4 (lower is better)
Translates to: ILHILMCKFHDRAKACHSKYIDV*FPRTST
Trigger: GGTAGATGTCCTAGGAAACCATACATCTATGTATTT...GGAGTGGCATGCTTTTGCCCTATCGTGGAATTTACACATCAGAATGTGCAGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR CCA 90 bp GCCGAAGTCCTTGAGGCAAAGGATATTGAATACCTCCAAAAGAAAGGCTTCAGTTTATTTTGTAGGCAATaGAAAGCCACCAGTGGTTTT +
Preference number: 4 (lower is better)
Translates to: AEVLEAKDIEYLQKKGFSLFCRQ*KATSGF
Trigger: AAAACCACTGGTGGCTTTCCATTGCCTACAAAATAA...ACTGAAGCCTTTCTTTTGGAGGTATTCAATATCCTTTGCCTCAAGGACTTCGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR CCA 90 bp CTGTTATTAGAATGGCCTGTCCAGAAGACAGCCAAATACATCCTTCAAACAGACTGTATTGGCTTTACCTaGCAGCTTGTTGGAAATGTA +
Preference number: 4 (lower is better)
Translates to: LLLEWPVQKTAKYILQTDCIGFT*QLVGNV
Trigger: TACATTTCCAACAAGCTGCCAGGTAAAGCCAATACA...GTCTGTTTGAAGGATGTATTTGGCTGTCTTCTGGACAGGCCATTCTAATAACAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR CCA 90 bp ATGAAAGAGACAGTATCTGCCGAAGTCCTTGAGGCAAAGGATATTGAATACCTCGTAACCCCTTTGTTTTaGCCAATTTCTCTCATTTGG +
Preference number: 4 (lower is better)
Translates to: MKETVSAEVLEAKDIEYLVTPLF*PISLIW
Trigger: CCAAATGAGAGAAATTGGCCAAAACAAAGGGGTTAC...GAGGTATTCAATATCCTTTGCCTCAAGGACTTCGGCAGATACTGTCTCTTTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR TCA 90 bp CTGCTCTGCCATGTAGTAGTTTGTGTGATCCTCATTTGTAAAATGGAAATACTAAACCACCTTGTTTTCTaGCTGAATTTGCCCAGCAGA +
Preference number: 4 (lower is better)
Translates to: LLCHVVVCVILICKMEILNHLVF*LNLPSR
Trigger: TCTGCTGGGCAAATTCAGTCAGAAAACAAGGTGGTT...TAGTATTTCCATTTTACAAATGAGGATCACACAAACTACTACATGGCAGAGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR TCA 90 bp AAGTCCTTGAGGCAAAGGATATTGAATACCTCCAAAAGAAAGGCTTCAGTAAAAAACCACCTTGTTTTCTaGCTGAATTTGCCCAGCAGA +
Preference number: 4 (lower is better)
Translates to: KSLRQRILNTSKRKASVKNHLVF*LNLPSR
Trigger: TCTGCTGGGCAAATTCAGTCAGAAAACAAGGTGGTT...TTTTACTGAAGCCTTTCTTTTGGAGGTATTCAATATCCTTTGCCTCAAGGACTT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR TCA 90 bp ATCTGCTTTTTGCAAATCTCAGGTCTGAGTGTTCCACTCTGTAGCATTTGGGTACCTCATAGTAAGCCCTaGTGTTTGAATGCATATATT +
Preference number: 4 (lower is better)
Translates to: ICFLQISGLSVPLCSIWVPHSKP*CLNAYI
Trigger: AATATATGCATTCAAACATCAGGGCTTACTATGAGG...TACCCAAATGCTACAGAGTGGAACACTCAGACCTGAGATTTGCAAAAAGCAGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR TCA 90 bp AGTATAGGCAACTACCACAAGAAAGAATTTGAACATGTCCCAATTCGAATTTTGCATGCTTGGAAGTTATaGGGAGACAGCCTGGTATGT +
Preference number: 4 (lower is better)
Translates to: SIGNYHKKEFEHVPIRILHAWKL*GDSLVC
Trigger: ACATACCAGGCTGTCTCCTCATAACTTCCAAGCATG...CAAAATTCGAATTGGGACATGTTCAAATTCTTTCTTGTGGTAGTTGCCTATACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR TCA 90 bp TTGAGGCAAAGGATATTGAATACCTCCAAAAGAAAGGCTTCAGTAAAAGCCAAGATACACACTATTCCCTaGCTAGCTCCCAAGACTTTT +
Preference number: 4 (lower is better)
Translates to: LRQRILNTSKRKASVKAKIHTIP*LAPKTF
Trigger: AAAAGTCTTGGGAGCTAGTCAGGGAATAGTGTGTAT...CTTGGCTTTTACTGAAGCCTTTCTTTTGGAGGTATTCAATATCCTTTGCCTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR TCA 90 bp CTATGGTTTCTGCCTACCCAGGATAGTCTTGTCTCTAGACAATGTATTGATGATACCAGTGGTTTTAGTTaGGCAGCAATGAAATTAAGC +
Preference number: 4 (lower is better)
Translates to: LWFLPTQDSLVSRQCIDDTSGFS*AAMKLS
Trigger: GCTTAATTTCATTGCTGCTCAACTAAAACCACTGGT...ATCATCAATACATTGTCTAGAGACAAGACTATCCTGGGTAGGCAGAAACCATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR TCA 90 bp AAGTCCTTGAGGCAAAGGATATTGAATACCTCCAAAAGAAAGGCTTCAGTAAAAAGAGATGTCAAGAATTaGGATTTGGGAACCTCTGCC +
Preference number: 4 (lower is better)
Translates to: KSLRQRILNTSKRKASVKRDVKN*DLGTSA
Trigger: GGCAGAGGTTCCCAAATCTCAATTCTTGACATCTCT...TTTTACTGAAGCCTTTCTTTTGGAGGTATTCAATATCCTTTGCCTCAAGGACTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR TCA 90 bp CTATGGTTTCTGCCTACCCAGGATAGTCTTGTCTCTAGACAATGTATTGATGATAATGATGATAATCAGTaGAGTTCTGTGATGGGCACA +
Preference number: 4 (lower is better)
Translates to: LWFLPTQDSLVSRQCIDDNDDNQ*SSVMGT
Trigger: TGTGCCCATCACAGAACTTCACTGATTATCATCATT...ATCATCAATACATTGTCTAGAGACAAGACTATCCTGGGTAGGCAGAAACCATAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR TCA 90 bp GAGGCAAAGGATATTGAATACCTCCAAAAGAAAGGCTTCAGTAAAAGCCAAGGACCTTCTCAATGCCAATaGAATATTCTAGGAGACTCT +
Preference number: 4 (lower is better)
Translates to: EAKDIEYLQKKGFSKSQGPSQCQ*NILGDS
Trigger: AGAGTCTCCTAGAATATTTCATTGGCATTGAGAAGG...TCCTTGGCTTTTACTGAAGCCTTTCTTTTGGAGGTATTCAATATCCTTTGCCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR CCA 90 bp TGTAAAGGTCACTTACGTTCACTACCTTCTTATATCCAGGATGAAAGCATGGGTTCGATAGTCTGGTTTTaGGGTACAAAAGTGACTTGT +
Preference number: 4 (lower is better)
Translates to: CKGHLRSLPSYIQDESMGSIVWF*GTKVTC
Trigger: ACAAGTCACTTTTGTACCCCAAAACCAGACTATCGA...ACCCATGCTTTCATCCTGGATATAAGAAGGTAGTGAACGTAAGTGACCTTTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000483213.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CCA 90 bp CTTTGTTTTGGCCAATTTCTCTCATTTGGAACAGCTGTATTTACCCAATACCTGGGAGAAAGGTGTAGCTaGGAAAAACTCATGAAAGAG +
Preference number: 4 (lower is better)
Translates to: LCFGQFLSFGTAVFTQYLGERCS*EKLMKE
Trigger: CTCTTTCATGAGTTTTTCCCAGCTACACCTTTCTCC...CAGGTATTGGGTAAATACAGCTGTTCCAAATGAGAGAAATTGGCCAAAACAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR CCA 90 bp TTTGGGTATCACCTAGGAATATGTGATTTATTGACATACCTGCTTTGGGTGGGAAACACAAAAGATCTATaGTTTCTGCCTACCCAGGAT +
Preference number: 4 (lower is better)
Translates to: FGYHLGICDLLTYLLWVGNTKDL*FLPTQD
Trigger: ATCCTGGGTAGGCAGAAACCATAGATCTTTTGTGTT...TCCCACCCAAAGCAGGTATGTCAATAAATCACATATTCCTAGGTGATACCCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR CCA 90 bp ATGCCAGATGTGCTTCCATCCAAAGCACATGAACAGAATGATATTAAATTACAAGTACATGGTAGGCTTTaGCTCAGCCATTTGGGCAAA +
Preference number: 4 (lower is better)
Translates to: MPDVLPSKAHEQNDIKLQVHGRL*LSHLGK
Trigger: TTTGCCCAAATGGCTGAGCCAAAGCCTACCATGTAC...TTGTAATTTAATATCATTCTGTTCATGTGCTTTGGATGGAAGCACATCTGGCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR CCA 90 bp AGACAGTATCTGCCGAAGTCCTTGAGGCAAAGGATATTGAATACCTCCAAAAGACCAATTTCTCTCATTTaGAACAGCTGTATTTACCCA +
Preference number: 4 (lower is better)
Translates to: RQYLPKSLRQRILNTSKRPISLI*NSCIYP
Trigger: TGGGTAAATACAGCTGTTCCAAATGAGAGAAATTGG...TCTTTTGGAGGTATTCAATATCCTTTGCCTCAAGGACTTCGGCAGATACTGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR CCA 90 bp CCACCATTCCTGGTATCAGTCCAGGTAAAATATATTACAGCTCTTTACTGGAGCATATATGGAAACACCTaGATGTCCAGGCAAAAGTTT +
Preference number: 4 (lower is better)
Translates to: PPFLVSVQVKYITALYWSIYGNT*MSRQKF
Trigger: AAACTTTTGCCTGGACATCCAGGTGTTTCCATATAT...GCTCCAGTAAAGAGCTGTAATATATTTTACCTGGACTGATACCAGGAATGGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371205.5
3UTR CAA 72 bp GTAGCATTTGGGTATCACCTAGGAATATGTGATTTATaGACATACCTGCTTTGGGTGGGATTGAGAACTGTA +
Preference number: 4 (lower is better)
Translates to: VAFGYHLGICDL*TYLLWVGLRTV
Trigger: TACAGTTCTCAATCCCACCCAAAGCAGGTATGTCAATAAATCACATATTCCTAGGTGATACCCAAATGCTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR TCA 90 bp CTGCTCTGCCATGTAGTAGTTTGTGTGATCCTCATTTGTAAAATGGAAATACTAACCTTGTTTTCTGACTaGATTTGCCCAGCAGATAGT +
Preference number: 4 (lower is better)
Translates to: LLCHVVVCVILICKMEILTLFSD*ICPADS
Trigger: ACTATCTGCTGGGCAAATTCAGTCAGAAAACAAGGT...TAGTATTTCCATTTTACAAATGAGGATCACACAAACTACTACATGGCAGAGCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR TCA 90 bp AGTATAGGCAACTACCACAAGAAAGAATTTGAACATGTCCCAATTCGAATTTTGTCAGTCACCTTTTCCTaGGAGACTTTCTCTGATGTC +
Preference number: 4 (lower is better)
Translates to: SIGNYHKKEFEHVPIRILSVTFS*ETFSDV
Trigger: GACATCAGAGAAAGTCTCTCAGGAAAAGGTGACTGA...CAAAATTCGAATTGGGACATGTTCAAATTCTTTCTTGTGGTAGTTGCCTATACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR TCA 90 bp CTGCTCTGCCATGTAGTAGTTTGTGTGATCCTCATTTGTAAAATGGAAATACTAGGATCCTGCACATTCTaGTGTGTAAATTCCACGATA +
Preference number: 4 (lower is better)
Translates to: LLCHVVVCVILICKMEILGSCTF*CVNSTI
Trigger: TATCGTGGAATTTACACATCAGAATGTGCAGGATCC...TAGTATTTCCATTTTACAAATGAGGATCACACAAACTACTACATGGCAGAGCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR TCA 90 bp CTGCTCTGCCATGTAGTAGTTTGTGTGATCCTCATTTGTAAAATGGAAATACTATCTGAAGGAGACTTGTaGAGTCTAATTCCAACTTGC +
Preference number: 4 (lower is better)
Translates to: LLCHVVVCVILICKMEILSEGDL*SLIPTC
Trigger: GCAAGTTGGAATTAGACTTCACAAGTCTCCTTCAGA...TAGTATTTCCATTTTACAAATGAGGATCACACAAACTACTACATGGCAGAGCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR TCA 90 bp GAAGTCCTTGAGGCAAAGGATATTGAATACCTCCAAAAGAAAGGCTTCAGTAAATGCAGGGACCTTGACTaGTACAACATTAAAATGAAG +
Preference number: 4 (lower is better)
Translates to: EVLEAKDIEYLQKKGFSKCRDLD*YNIKMK
Trigger: CTTCATTTTAATGTTGTATCAGTCAAGGTCCCTGCA...TTTACTGAAGCCTTTCTTTTGGAGGTATTCAATATCCTTTGCCTCAAGGACTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR TCA 90 bp TTTGGGTATCACCTAGGAATATGTGATTTATTGACATACCTGCTTTGGGTGGGATCTTTATCAGCAGCATaGAAATGGACTAATAGTACC +
Preference number: 4 (lower is better)
Translates to: FGYHLGICDLLTYLLWVGSLSAA*KWTNST
Trigger: GGTACTATTAGTCCATTTTCATGCTGCTGATAAAGA...TCCCACCCAAAGCAGGTATGTCAATAAATCACATATTCCTAGGTGATACCCAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR GCA 90 bp ATGAAAGAGACAGTATCTGCCGAAGTCCTTGAGGCAAAGGATATTGAATACCTCTATTTCAGCTGCTTTTaGTATACCATATCTTTCCAG +
Preference number: 4 (lower is better)
Translates to: MKETVSAEVLEAKDIEYLYFSCF*YTISFQ
Trigger: CTGGAAAGATATGGTATAGCAAAAGCAGCTGAAATA...GAGGTATTCAATATCCTTTGCCTCAAGGACTTCGGCAGATACTGTCTCTTTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR GCA 90 bp CCACCATTCCTGGTATCAGTCCAGGTAAAATATATTACAGCTCTTTACTGGAGCGTGGAGTACAAATGTTaGATTTTCAAAACTGGGAAT +
Preference number: 4 (lower is better)
Translates to: PPFLVSVQVKYITALYWSVEYKC*IFKTGN
Trigger: ATTCCCAGTTTTGAAAATGCAACATTTGTACTCCAC...GCTCCAGTAAAGAGCTGTAATATATTTTACCTGGACTGATACCAGGAATGGTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR CCA 90 bp GAGGCAAAGGATATTGAATACCTCCAAAAGAAAGGCTTCAGTAAAAGCCAAGGAAGGTTTCCTGATTATTaGTTTCATATGGGACTATGC +
Preference number: 4 (lower is better)
Translates to: EAKDIEYLQKKGFSKSQGRFPDY*FHMGLC
Trigger: GCATAGTCCCATATGAAACCAATAATCAGGAAACCT...TCCTTGGCTTTTACTGAAGCCTTTCTTTTGGAGGTATTCAATATCCTTTGCCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CCA 90 bp AAGTCCTTGAGGCAAAGGATATTGAATACCTCCAAAAGAAAGGCTTCAGTAAAAGGAGAAAGGTGTAGCTaGGAAAAACTCATGAAAGAG +
Preference number: 4 (lower is better)
Translates to: KSLRQRILNTSKRKASVKGERCS*EKLMKE
Trigger: CTCTTTCATGAGTTTTTCCCAGCTACACCTTTCTCC...TTTTACTGAAGCCTTTCTTTTGGAGGTATTCAATATCCTTTGCCTCAAGGACTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CCA 90 bp AAGTCCTTGAGGCAAAGGATATTGAATACCTCCAAAAGAAAGGCTTCAGTAAAATTGACATACCTGCTTTaGGTGGGATTGAGAACTGTA +
Preference number: 4 (lower is better)
Translates to: KSLRQRILNTSKRKASVKLTYLL*VGLRTV
Trigger: TACAGTTCTCAATCCCACCCAAAGCAGGTATGTCAA...TTTTACTGAAGCCTTTCTTTTGGAGGTATTCAATATCCTTTGCCTCAAGGACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR CCA 90 bp GGCAACTACCACAAGAAAGAATTTGAACATGTCCCAATTCGAATTTTGATTCCTATAGCTGCTGCTTCATaGAATAAGCAAACAAAGCCC +
Preference number: 4 (lower is better)
Translates to: GNYHKKEFEHVPIRILIPIAAAS*NKQTKP
Trigger: GGGCTTTGTTTGCTTATTCCATGAAGCAGCAGCTAT...AGGAATCAAAATTCGAATTGGGACATGTTCAAATTCTTTCTTGTGGTAGTTGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR CCA 90 bp CTGCTCTGCCATGTAGTAGTTTGTGTGATCCTCATTTGTAAAATGGAAATACTATTTGGCTCAGCCATTTaGGCAAATGACTTAACCTCT +
Preference number: 4 (lower is better)
Translates to: LLCHVVVCVILICKMEILFGSAI*ANDLTS
Trigger: AGAGGTTAAGTCATTTGCCCAAATGGCTGAGCCAAA...TAGTATTTCCATTTTACAAATGAGGATCACACAAACTACTACATGGCAGAGCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR CCA 90 bp CTTTGTTTTGGCCAATTTCTCTCATTTGGAACAGCTGTATTTACCCAATACCTGAATGAGTTAAGACTTTaGGGAACTGTTGGGAAGGAA +
Preference number: 4 (lower is better)
Translates to: LCFGQFLSFGTAVFTQYLNELRL*GTVGKE
Trigger: TTCCTTCCCAACAGTTCCCCAAAGTCTTAACTCATT...CAGGTATTGGGTAAATACAGCTGTTCCAAATGAGAGAAATTGGCCAAAACAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR CCA 90 bp ATGAAAGAGACAGTATCTGCCGAAGTCCTTGAGGCAAAGGATATTGAATACCTCTTGCTTCTTCAAGACTaGCTAAATGATGATAATCAG +
Preference number: 4 (lower is better)
Translates to: MKETVSAEVLEAKDIEYLLLLQD*LNDDNQ
Trigger: CTGATTATCATCATTTAGCCAGTCTTGAAGAAGCAA...GAGGTATTCAATATCCTTTGCCTCAAGGACTTCGGCAGATACTGTCTCTTTCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371205.5
3UTR CAA 72 bp CAAAAGATCTATGGTTTCTGCCTACCCAGGATAGTCTaGTCTCTAGACAATGTATTGATGATGCAAATGTTC +
Preference number: 4 (lower is better)
Translates to: QKIYGFCLPRIV*SLDNVLMMQMF
Trigger: GAACATTTGCATCATCAATACATTGTCTAGAGACAAGACTATCCTGGGTAGGCAGAAACCATAGATCTTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR TCA 90 bp AGTATAGGCAACTACCACAAGAAAGAATTTGAACATGTCCCAATTCGAATTTTGGAAAGCATGGGTCCCTaGGAATTTCATTACTTGCAA +
Preference number: 4 (lower is better)
Translates to: SIGNYHKKEFEHVPIRILESMGP*EFHYLQ
Trigger: TTGCAAGTAATGAAATTCTCAGGGACCCATGCTTTC...CAAAATTCGAATTGGGACATGTTCAAATTCTTTCTTGTGGTAGTTGCCTATACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR TCA 90 bp AAGTCCTTGAGGCAAAGGATATTGAATACCTCCAAAAGAAAGGCTTCAGTAAAAGAATATGTGATTTATTaGCATACCTGCTTTGGGTGG +
Preference number: 4 (lower is better)
Translates to: KSLRQRILNTSKRKASVKEYVIY*HTCFGW
Trigger: CCACCCAAAGCAGGTATGTCAATAAATCACATATTC...TTTTACTGAAGCCTTTCTTTTGGAGGTATTCAATATCCTTTGCCTCAAGGACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR GCA 90 bp ATGCCAGATGTGCTTCCATCCAAAGCACATGAACAGAATGATATTAAATTACAACTGATTAGCATCATATaGCAGATGTGCTTCCATCCA +
Preference number: 4 (lower is better)
Translates to: MPDVLPSKAHEQNDIKLQLISII*QMCFHP
Trigger: TGGATGGAAGCACATCTGGCATATGATGCTAATCAG...TTGTAATTTAATATCATTCTGTTCATGTGCTTTGGATGGAAGCACATCTGGCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR GCA 90 bp CTATGGTTTCTGCCTACCCAGGATAGTCTTGTCTCTAGACAATGTATTGATGATCTGTCTGTATACTTTTaGCATGTTGCATCACATAAT +
Preference number: 4 (lower is better)
Translates to: LWFLPTQDSLVSRQCIDDLSVYF*HVASHN
Trigger: ATTATGTGATGCAACATGGCAAAAGTATACAGACAG...ATCATCAATACATTGTCTAGAGACAAGACTATCCTGGGTAGGCAGAAACCATAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR CCA 90 bp AAGTCCTTGAGGCAAAGGATATTGAATACCTCCAAAAGAAAGGCTTCAGTAAAATCGATAGTCTGGTTTTaGGGTACAAAAGTGACTTGT +
Preference number: 4 (lower is better)
Translates to: KSLRQRILNTSKRKASVKSIVWF*GTKVTC
Trigger: ACAAGTCACTTTTGTACCCCAAAACCAGACTATCGA...TTTTACTGAAGCCTTTCTTTTGGAGGTATTCAATATCCTTTGCCTCAAGGACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CCA 90 bp AAAGCAGTATTCACTCAGGTACTTCTCCTTTACTCCAGCGTAAGATGTTTTTATTGGATTTCAAACTGCTaGAATGGAAGAGTCATCTCA +
Preference number: 4 (lower is better)
Translates to: KAVFTQVLLLYSSVRCFYWISNC*NGRVIS
Trigger: TGAGATGACTCTTCCATTCCAGCAGTTTGAAATCCA...ATAAAAACATCTTACGCTGGAGTAAAGGAGAAGTACCTGAGTGAATACTGCTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CCA 90 bp ATGCCAGATGTGCTTCCATCCAAAGCACATGAACAGAATGATATTAAATTACAATATGAGGAGACAGCCTaGTATGTTCGGGAAAGAAAA +
Preference number: 4 (lower is better)
Translates to: MPDVLPSKAHEQNDIKLQYEETA*YVRERK
Trigger: TTTTCTTTCCCGAACATACCAGGCTGTCTCCTCATA...TTGTAATTTAATATCATTCTGTTCATGTGCTTTGGATGGAAGCACATCTGGCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR CCA 90 bp TTGAGGCAAAGGATATTGAATACCTCCAAAAGAAAGGCTTCAGTAAAAGCCAAGAATCAGAGCAACTATTaGTATTTGAATCAGAGAGGG +
Preference number: 4 (lower is better)
Translates to: LRQRILNTSKRKASVKAKNQSNY*YLNQRG
Trigger: CCCTCTCTGATTCAAATACCAATAGTTGCTCTGATT...CTTGGCTTTTACTGAAGCCTTTCTTTTGGAGGTATTCAATATCCTTTGCCTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR CCA 90 bp AGTATAGGCAACTACCACAAGAAAGAATTTGAACATGTCCCAATTCGAATTTTGAATCACTCATGGCCTTaGCCATATGACTTTGCCATT +
Preference number: 4 (lower is better)
Translates to: SIGNYHKKEFEHVPIRILNHSWP*PYDFAI
Trigger: AATGGCAAAGTCATATGGCCAAGGCCATGAGTGATT...CAAAATTCGAATTGGGACATGTTCAAATTCTTTCTTGTGGTAGTTGCCTATACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR TCA 90 bp GGCAACTACCACAAGAAAGAATTTGAACATGTCCCAATTCGAATTTTGATTCCTTCACCTAGGAATATGTaGTTTATTGACATACCTGCT +
Preference number: 4 (lower is better)
Translates to: GNYHKKEFEHVPIRILIPSPRNM*FIDIPA
Trigger: AGCAGGTATGTCAATAAATCACATATTCCTAGGTGA...AGGAATCAAAATTCGAATTGGGACATGTTCAAATTCTTTCTTGTGGTAGTTGCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR TCA 90 bp GGCAACTACCACAAGAAAGAATTTGAACATGTCCCAATTCGAATTTTGATTCCTCCTCATAGTAAGCCCTaGTGTTTGAATGCATATATT +
Preference number: 4 (lower is better)
Translates to: GNYHKKEFEHVPIRILIPPHSKP*CLNAYI
Trigger: AATATATGCATTCAAACATCAGGGCTTACTATGAGG...AGGAATCAAAATTCGAATTGGGACATGTTCAAATTCTTTCTTGTGGTAGTTGCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR TCA 90 bp GGCAACTACCACAAGAAAGAATTTGAACATGTCCCAATTCGAATTTTGATTCCTCCACAAGAAAGAATTTaGACATGTCCCAATTCGAAT +
Preference number: 4 (lower is better)
Translates to: GNYHKKEFEHVPIRILIPPQERI*TCPNSN
Trigger: ATTCGAATTGGGACATGTTCAAATTCTTTCTTGTGG...AGGAATCAAAATTCGAATTGGGACATGTTCAAATTCTTTCTTGTGGTAGTTGCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR TCA 90 bp CTGCTCTGCCATGTAGTAGTTTGTGTGATCCTCATTTGTAAAATGGAAATACTAATCTTTAAATCCAGATaGAACTTTCCCAAGGTCTCT +
Preference number: 4 (lower is better)
Translates to: LLCHVVVCVILICKMEILIFKSR*NFPKVS
Trigger: AGAGACCTTGGGAAAGTTTCATCTGGATTTAAAGAT...TAGTATTTCCATTTTACAAATGAGGATCACACAAACTACTACATGGCAGAGCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR TCA 90 bp AAGTCCTTGAGGCAAAGGATATTGAATACCTCCAAAAGAAAGGCTTCAGTAAAACTAACAGTTGGAATTTaGATCAGAGCAACTATTGGT +
Preference number: 4 (lower is better)
Translates to: KSLRQRILNTSKRKASVKLTVGI*IRATIG
Trigger: ACCAATAGTTGCTCTGATTCAAATTCCAACTGTTAG...TTTTACTGAAGCCTTTCTTTTGGAGGTATTCAATATCCTTTGCCTCAAGGACTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR TCA 90 bp GGCAACTACCACAAGAAAGAATTTGAACATGTCCCAATTCGAATTTTGATTCCTGCAGACTCACAAACATaGAAATCAATGTTTACTGCA +
Preference number: 4 (lower is better)
Translates to: GNYHKKEFEHVPIRILIPADSQT*KSMFTA
Trigger: TGCAGTAAACATTGATTTTCATGTTTGTGAGTCTGC...AGGAATCAAAATTCGAATTGGGACATGTTCAAATTCTTTCTTGTGGTAGTTGCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR GCA 90 bp GAAGTCCTTGAGGCAAAGGATATTGAATACCTCCAAAAGAAAGGCTTCAGTAAATATTTCAGCTGCTTTTaGTATACCATATCTTTCCAG +
Preference number: 4 (lower is better)
Translates to: EVLEAKDIEYLQKKGFSKYFSCF*YTISFQ
Trigger: CTGGAAAGATATGGTATAGCAAAAGCAGCTGAAATA...TTTACTGAAGCCTTTCTTTTGGAGGTATTCAATATCCTTTGCCTCAAGGACTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR GCA 90 bp ATGCCAGATGTGCTTCCATCCAAAGCACATGAACAGAATGATATTAAATTACAAGGAGTTTTAAGTGCATaGTTGGAAGTTATGAGGAGA +
Preference number: 4 (lower is better)
Translates to: MPDVLPSKAHEQNDIKLQGVLSA*LEVMRR
Trigger: TCTCCTCATAACTTCCAAGCATGCACTTAAAACTCC...TTGTAATTTAATATCATTCTGTTCATGTGCTTTGGATGGAAGCACATCTGGCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR GCA 90 bp CTTTGTTTTGGCCAATTTCTCTCATTTGGAACAGCTGTATTTACCCAATACCTGAGATTTGGGAACCTCTaGCTAGATTTCAGAATATAT +
Preference number: 4 (lower is better)
Translates to: LCFGQFLSFGTAVFTQYLRFGNL*LDFRIY
Trigger: ATATATTCTGAAATCTAGGCAGAGGTTCCCAAATCT...CAGGTATTGGGTAAATACAGCTGTTCCAAATGAGAGAAATTGGCCAAAACAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR CCA 90 bp CTTTGTTTTGGCCAATTTCTCTCATTTGGAACAGCTGTATTTACCCAATACCTGTGGAAAAATAAGATGTaGCTTGGCTTTAAAACTCAG +
Preference number: 4 (lower is better)
Translates to: LCFGQFLSFGTAVFTQYLWKNKM*LGFKTQ
Trigger: CTGAGTTTTAAAGCCAAGCCACATCTTATTTTTCCA...CAGGTATTGGGTAAATACAGCTGTTCCAAATGAGAGAAATTGGCCAAAACAAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR CCA 90 bp AAGTCCTTGAGGCAAAGGATATTGAATACCTCCAAAAGAAAGGCTTCAGTAAAATCAAGAATTGAGATTTaGGAACCTCTGCCTAGATTT +
Preference number: 4 (lower is better)
Translates to: KSLRQRILNTSKRKASVKSRIEI*EPLPRF
Trigger: AAATCTAGGCAGAGGTTCCCAAATCTCAATTCTTGA...TTTTACTGAAGCCTTTCTTTTGGAGGTATTCAATATCCTTTGCCTCAAGGACTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR CCA 90 bp ATGCCAGATGTGCTTCCATCCAAAGCACATGAACAGAATGATATTAAATTACAAGGTGTTGAAATAATCTaGAGGGCTCAGAAGAAGATA +
Preference number: 4 (lower is better)
Translates to: MPDVLPSKAHEQNDIKLQGVEII*RAQKKI
Trigger: TATCTTCTTCTGAGCCCTCCAGATTATTTCAACACC...TTGTAATTTAATATCATTCTGTTCATGTGCTTTGGATGGAAGCACATCTGGCAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR GCA 90 bp AAGTCCTTGAGGCAAAGGATATTGAATACCTCCAAAAGAAAGGCTTCAGTAAAAATGAAGAGTCTTGAATaGCACTTTTCTAAAGAGAAG +
Preference number: 4 (lower is better)
Translates to: KSLRQRILNTSKRKASVKMKSLE*HFSKEK
Trigger: CTTCTCTTTAGAAAAGTGGCATTCAAGACTCTTCAT...TTTTACTGAAGCCTTTCTTTTGGAGGTATTCAATATCCTTTGCCTCAAGGACTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR GCA 90 bp ATGCCAGATGTGCTTCCATCCAAAGCACATGAACAGAATGATATTAAATTACAATTTATCAGGGGTTTCTaGTTTTGCTGCTTCTTCATT +
Preference number: 4 (lower is better)
Translates to: MPDVLPSKAHEQNDIKLQFIRGF*FCCFFI
Trigger: AATGAAGAAGCAGCAAAAGCAGAAACCCCTGATAAA...TTGTAATTTAATATCATTCTGTTCATGTGCTTTGGATGGAAGCACATCTGGCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371205.5
3UTR CAA 72 bp TATTTCCTTATAAAACTCTTTGGCTTTAGCACATATTaGCCTACTGTAGAAAATTCTCCTACCCACAGAGCA +
Preference number: 4 (lower is better)
Translates to: YFLIKLFGFSTY*PTVENSPTHRA
Trigger: TGCTCTGTGGGTAGGAGAATTTTCTACAGTAGGCAAATATGTGCTAAAGCCAAAGAGTTTTATAAGGAAATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR GCA 90 bp AGTATAGGCAACTACCACAAGAAAGAATTTGAACATGTCCCAATTCGAATTTTGTATTTCAGCTGCTTTTaGTATACCATATCTTTCCAG +
Preference number: 4 (lower is better)
Translates to: SIGNYHKKEFEHVPIRILYFSCF*YTISFQ
Trigger: CTGGAAAGATATGGTATAGCAAAAGCAGCTGAAATA...CAAAATTCGAATTGGGACATGTTCAAATTCTTTCTTGTGGTAGTTGCCTATACT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS GCA 90 bp GGGGTAGTTGCTGAGGCTCCTCTCCACCACATCCAGAACCCTGTCTaGCAACTCTTCACTTTCCATCCTGAGCAACCGCATGCCTGCCGT +
Preference number: 5 (lower is better)
Translates to: GVVAEAPLHHIQNPV*QLFTFHPEQPHACR
Trigger: ACGGCAGGCATGCGGTTGCTCAGGATGGAAAGTGAAGAGTTGGCAGACAGGGTTCTGGATGTGGTGGAGAGGAGCCTCAGCAACTACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371206.6
ENST00000371207.8
ENST00000453258.6
ENST00000490659.5
ENST00000543964.6
CDS-3UTR CAA 90 bp CAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGGAAGGATGGCCCAGGGAAGGATGGCCTaGAACACTGCGATGGAGGAA +
Preference number: 5 (lower is better)
Translates to: QGSFTLVKTGPGRQGRMAQGRMA*NTAMEE
Trigger: TTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTG...GGCCATCCTTCCCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CAA 90 bp CAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGGAAGGATGGCCCCTGCATTCTTCTACTaGATGCACCACGCCTGTGTC +
Preference number: 5 (lower is better)
Translates to: QGSFTLVKTGPGRQGRMAPAFFY*MHHACV
Trigger: GACACAGGCGTGGTGCATCAAGTAGAAGAATGCAGG...GGCCATCCTTCCCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000639992.1
CDS-3UTR CAA 90 bp TTCCCACATGTTGTGGGAGGGACGCAGTGGGAGGTAATTGAATCATGGAGGCCAGCCTCCCACCTGATTTaGAGGCCTCCCCAGCCATGT +
Preference number: 5 (lower is better)
Translates to: FPHVVGGTQWEVIESWRPASHLI*RPPQPC
Trigger: ACATGGCTGGGGAGGCCTCAAAATCAGGTGGGAGGC...TGGCCTCCATGATTCAATTACCTCCCACTGCGTCCCTCCCACAACATGTGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR CAA 90 bp AAAGCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGGAAGGATGTCCAGGCAAAAGTTaGCTGCAGGGGCAGAGCCCT +
Preference number: 5 (lower is better)
Translates to: KAKEASHSSRLALADREGCPGKS*LQGQSP
Trigger: AGGGCTCTGCCCCTGCAGCAAACTTTTGCCTGGACA...TCCTTCCCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR CAA 90 bp GCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGGAAGGATGGGCCATAGAGGCGAAATaGCAGAGCATTATCTGGGGA +
Preference number: 5 (lower is better)
Translates to: AKEASHSSRLALADREGWAIEAK*QSIIWG
Trigger: TCCCCAGATAATGCTCTGCAATTTCGCCTCTATGGC...CCATCCTTCCCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CAA 90 bp CCTGGCAGACAGGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCCTCGCTGCCCTGGATCTaGCCAATGAAATGGATGTGC +
Preference number: 5 (lower is better)
Translates to: PGRQGRMALNTAMEENAPSLPWI*PMKWMC
Trigger: GCACATCCATTTCATTGGCAAGATCCAGGGCAGCGA...GGGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTGTCTGCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CAA 90 bp CCCTGGCAGACAGGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCTCGCTGCCCTGGATCTaGCCAATGAAATGGATGTGC +
Preference number: 5 (lower is better)
Translates to: PWQTGKDGLEHCDGGKCSSLPWI*PMKWMC
Trigger: GCACATCCATTTCATTGGCAAGATCCAGGGCAGCGA...GGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTGTCTGCCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CAA 90 bp AAAGCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGGAAGGACAGGGAAGGATGGCCTaGAACACTGCGATGGAGGAA +
Preference number: 5 (lower is better)
Translates to: KAKEASHSSRLALADREGQGRMA*NTAMEE
Trigger: TTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTG...TCCTTCCCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CAA 90 bp CCCTGGCAGACAGGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCTGGCTTGTCAGGTCCTaGGTTCCCTTCATTGCAGCT +
Preference number: 5 (lower is better)
Translates to: PWQTGKDGLEHCDGGKCSWLVRS*VPFIAA
Trigger: AGCTGCAATGAAGGGAACCAAGGACCTGACAAGCCA...GGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTGTCTGCCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453258.6
CDS-3UTR CAA 90 bp CAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGGAAGGATGGCCTTTTCTGGCAATGCTTaGTTCTGGGTCAACCCCACA +
Preference number: 5 (lower is better)
Translates to: QGSFTLVKTGPGRQGRMAFSGNA*FWVNPT
Trigger: TGTGGGGTTGACCCAGAACAAAGCATTGCCAGAAAA...GGCCATCCTTCCCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CAA 90 bp AAAGCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGGAAGGAGTAAACGGGTGTCTCTaGGTGCTGGGACCTTGGAAT +
Preference number: 5 (lower is better)
Translates to: KAKEASHSSRLALADREGVNGCL*VLGPWN
Trigger: ATTCCAAGGTCCCAGCACCAAGAGACACCCGTTTAC...TCCTTCCCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
CDS-3UTR CAA 90 bp CCTGGCAGACAGGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCCGCCATAGAGGCGAAATaGCAGAGCATTATCTGGGGA +
Preference number: 5 (lower is better)
Translates to: PGRQGRMALNTAMEENAPAIEAK*QSIIWG
Trigger: TCCCCAGATAATGCTCTGCAATTTCGCCTCTATGGC...GGGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTGTCTGCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CAA 90 bp CCTGGCAGACAGGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCCAGGTGTGGACAATGGTaGCTCAGCTGGGATCATGTT +
Preference number: 5 (lower is better)
Translates to: PGRQGRMALNTAMEENAPRCGQW*LSWDHV
Trigger: AACATGATCCCAGCTGAGCAACCATTGTCCACACCT...GGGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTGTCTGCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CAA 90 bp TCAGTAAAAGCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGCAGGGAAGGATGGCCTaGAACACTGCGATGGAGGAA +
Preference number: 5 (lower is better)
Translates to: SVKAKEASHSSRLALADRQGRMA*NTAMEE
Trigger: TTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTG...CCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGCTTTTACTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CAA 90 bp GCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGGAAGGATGGCTTGGCCATATGACTTaGCCATTCCTCCCACTGTTT +
Preference number: 5 (lower is better)
Translates to: AKEASHSSRLALADREGWLGHMT*PFLPLF
Trigger: AAACAGTGGGAGGAATGGCAAAGTCATATGGCCAAG...CCATCCTTCCCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR CAA 90 bp GCTTCAGTAAAAGCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACCCTGCATTCTTCTACTaGATGCACCACGCCTGTGTC +
Preference number: 5 (lower is better)
Translates to: ASVKAKEASHSSRLALADPAFFY*MHHACV
Trigger: GACACAGGCGTGGTGCATCAAGTAGAAGAATGCAGG...GTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGCTTTTACTGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000639992.1
CDS-3UTR CAA 90 bp CAGGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCCTGGACGATTTCGCTGCCCTGGATCTaGCCAATGAAATGGATGTGC +
Preference number: 5 (lower is better)
Translates to: QGRMALNTAMEENAPWTISLPWI*PMKWMC
Trigger: GCACATCCATTTCATTGGCAAGATCCAGGGCAGCGA...AATCGTCCAGGGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CAA 90 bp AGTAAAAGCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGGATCGCTGCCCTGGATCTaGCCAATGAAATGGATGTGC +
Preference number: 5 (lower is better)
Translates to: SKSQGSFTLVKTGPGRQGSLPWI*PMKWMC
Trigger: GCACATCCATTTCATTGGCAAGATCCAGGGCAGCGA...TCCCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGCTTTTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CAA 90 bp AAAGCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGGAAGGAAGGTGTGGACAATGGTaGCTCAGCTGGGATCATGTT +
Preference number: 5 (lower is better)
Translates to: KAKEASHSSRLALADREGRCGQW*LSWDHV
Trigger: AACATGATCCCAGCTGAGCAACCATTGTCCACACCT...TCCTTCCCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CAA 90 bp CAGACAGGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCCTGGACAGGTGTGGACAATGGTaGCTCAGCTGGGATCATGTT +
Preference number: 5 (lower is better)
Translates to: QTGKDGLEHCDGGKCSLDRCGQW*LSWDHV
Trigger: AACATGATCCCAGCTGAGCAACCATTGTCCACACCT...GTCCAGGGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTGTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CAA 90 bp GTGGTGCGGACCAGCTCGCCAGCAACAGAAGGGTTTGTAGTCGGCCTGGCAGTGGAATCAGAGCAACTATaGGTATTTGAATCAGAGAGG +
Preference number: 5 (lower is better)
Translates to: VVRTSSPATEGFVVGLAVESEQL*VFESER
Trigger: CCTCTCTGATTCAAATACCAATAGTTGCTCTGATTC...CACTGCCAGGCCGACTACAAACCCTTCTGTTGCTGGCGAGCTGGTCCGCACCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR CAA 90 bp TGGCAGACAGGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCCTGTCCTGGACAGATGTATaGGCTTTACCTGGCAGCTTG +
Preference number: 5 (lower is better)
Translates to: WQTGKDGLEHCDGGKCSLSWTDV*ALPGSL
Trigger: CAAGCTGCCAGGTAAAGCCAATACATCTGTCCAGGA...CAGGGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTGTCTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR CAA 90 bp CCTGGCAGACAGGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCCTGCTTCTTCCTCATTTaGCTCTTGATGCCACCACGT +
Preference number: 5 (lower is better)
Translates to: PGRQGRMALNTAMEENAPCFFLI*LLMPPR
Trigger: ACGTGGTGGCATCAAGAGCAAAATGAGGAAGAAGCA...GGGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTGTCTGCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR CAA 90 bp CAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGGAAGGATGGCCAGATCAACCACCAACTaGCATCTTGTGCCTGGAAAA +
Preference number: 5 (lower is better)
Translates to: QGSFTLVKTGPGRQGRMARSTTN*HLVPGK
Trigger: TTTTCCAGGCACAAGATGCAAGTTGGTGGTTGATCT...GGCCATCCTTCCCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR CAA 90 bp CAGTTCCTGAGATTCTTCTTTCAGCCAGCTCAGCCTCCTATCACAGGACTCAAGGAGGAAAAAGTGGTTTaGTGGGCTGGGCCCAGGGTC +
Preference number: 5 (lower is better)
Translates to: QFLRFFFQPAQPPITGLKEEKVV*WAGPRV
Trigger: GACCCTGGGCCCAGCCCACAAAACCACTTTTTCCTC...CTTGAGTCCTGTGATAGGAGGCTGAGCTGGCTGAAAGAAGAATCTCAGGAACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR CAA 90 bp CAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGGAAGGATGGCCGCCCACCTTCACCATTaGACTGTCAGTAAAAGAATG +
Preference number: 5 (lower is better)
Translates to: QGSFTLVKTGPGRQGRMAAHLHH*TVSKRM
Trigger: CATTCTTTTACTGACAGTCAAATGGTGAAGGTGGGC...GGCCATCCTTCCCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS GCA 90 bp TGGAGGTGCAGATGTGAAGGGGGCAGGTCTGGATTGAGTTATACTTaGCTGAATGTCCTTGGCCAGTTTCTGCCAGAGTGCCTGATCCTT +
Preference number: 5 (lower is better)
Translates to: WRCRCEGGRSGLSYT*LNVLGQFLPECLIL
Trigger: AAGGATCAGGCACTCTGGCAGAAACTGGCCAAGGACATTCAGGCAAGTATAACTCAATCCAGACCTGCCCCCTTCACATCTGCACCTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371206.6
CDS CCA 90 bp TGCCGTGGCTCCCAGGTAAACGGGTGTCTCTTGGTGCTGGGACCTTaGAATCACTTCCCTAGCTCTTTCCATGCAATCAGTCAGGTAAAT +
Preference number: 5 (lower is better)
Translates to: CRGSQVNGCLLVLGP*NHFPSSFHAISQVN
Trigger: ATTTACCTGACTGATTGCATGGAAAGAGCTAGGGAAGTGATTCCAAGGTCCCAGCACCAAGAGACACCCGTTTACCTGGGAGCCACGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000371205.5
ENST00000371206.6
ENST00000371207.8
ENST00000453258.6
ENST00000483213.6
ENST00000490659.5
ENST00000494070.1
ENST00000543964.6
CDS-3UTR CAA 90 bp TTTCCCCATCAGCTCAACAGTCAGTCCCCAGATCTAGAGATGGAGAGCTTGGGACCTGCATTCTTCTACTaGATGCACCACGCCTGTGTC +
Preference number: 5 (lower is better)
Translates to: FPHQLNSQSPDLEMESLGPAFFY*MHHACV
Trigger: GACACAGGCGTGGTGCATCAAGTAGAAGAATGCAGG...TCCCAAGCTCTCCATCTCTAGATCTGGGGACTGACTGTTGAGCTGATGGGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR CAA 90 bp GAATGTCCTTGGCCAGTTTCTGCCAGAGTGCCTGATCCTTCCCATAGCACAAGAGTAAACGGGTGTCTCTaGGTGCTGGGACCTTGGAAT +
Preference number: 5 (lower is better)
Translates to: ECPWPVSARVPDPSHSTRVNGCL*VLGPWN
Trigger: ATTCCAAGGTCCCAGCACCAAGAGACACCCGTTTAC...TCTTGTGCTATGGGAAGGATCAGGCACTCTGGCAGAAACTGGCCAAGGACATTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483213.6
CDS-3UTR CAA 90 bp CAGGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCCTGGACGATTGCCATAGAGGCGAAATaGCAGAGCATTATCTGGGGA +
Preference number: 5 (lower is better)
Translates to: QGRMALNTAMEENAPWTIAIEAK*QSIIWG
Trigger: TCCCCAGATAATGCTCTGCAATTTCGCCTCTATGGC...AATCGTCCAGGGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CAA 90 bp TTTCCCCATCAGCTCAACAGTCAGTCCCCAGATCTAGAGATGGAGAGCTTGGGATCGCTGCCCTGGATCTaGCCAATGAAATGGATGTGC +
Preference number: 5 (lower is better)
Translates to: FPHQLNSQSPDLEMESLGSLPWI*PMKWMC
Trigger: GCACATCCATTTCATTGGCAAGATCCAGGGCAGCGA...TCCCAAGCTCTCCATCTCTAGATCTGGGGACTGACTGTTGAGCTGATGGGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR CAA 90 bp TCAGTAAAAGCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGAGGTGTGGACAATGGTaGCTCAGCTGGGATCATGTT +
Preference number: 5 (lower is better)
Translates to: SVKAKEASHSSRLALADRRCGQW*LSWDHV
Trigger: AACATGATCCCAGCTGAGCAACCATTGTCCACACCT...CCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGCTTTTACTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CAA 90 bp GCTTCAGTAAAAGCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGTGTGGACAATGGTaGCTCAGCTGGGATCATGTT +
Preference number: 5 (lower is better)
Translates to: ASVKAKEASHSSRLALADRCGQW*LSWDHV
Trigger: AACATGATCCCAGCTGAGCAACCATTGTCCACACCT...GTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGCTTTTACTGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CAA 90 bp AAAGCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGGAAGGACTGCTTTGGGTGGGATaGAGAACTGTATTGACTGCA +
Preference number: 5 (lower is better)
Translates to: KAKEASHSSRLALADREGLLWVG*RTVLTA
Trigger: TGCAGTCAATACAGTTCTCAATCCCACCCAAAGCAG...TCCTTCCCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR CAA 90 bp ACAGGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCCTGGACGATAGAGATAGGGGACATTaGGCTTCCGGTTTGTGTGAG +
Preference number: 5 (lower is better)
Translates to: TGKDGLEHCDGGKCSLDDRDRGH*ASGLCE
Trigger: CTCACACAAACCGGAAGCCAAATGTCCCCTATCTCT...ATCGTCCAGGGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR CAA 90 bp GCTTCAGTAAAAGCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGAGATAGGGGACATTaGGCTTCCGGTTTGTGTGAG +
Preference number: 5 (lower is better)
Translates to: ASVKAKEASHSSRLALADRDRGH*ASGLCE
Trigger: CTCACACAAACCGGAAGCCAAATGTCCCCTATCTCT...GTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGCTTTTACTGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR CAA 90 bp AAAGCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGGAAGGACAGTGGACAGGGAGGTaGGCTAGAACTATTACCTTA +
Preference number: 5 (lower is better)
Translates to: KAKEASHSSRLALADREGQWTGR*ARTITL
Trigger: TAAGGTAATAGTTCTAGCCAACCTCCCTGTCCACTG...TCCTTCCCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR CAA 90 bp CCCTGGCAGACAGGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCGACTTTGGGGAACTGTaGGGAAGGAATGATTGGTTT +
Preference number: 5 (lower is better)
Translates to: PWQTGKDGLEHCDGGKCSDFGEL*GRNDWF
Trigger: AAACCAATCATTCCTTCCCAACAGTTCCCCAAAGTC...GGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTGTCTGCCAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR CAA 90 bp CAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGGAAGGATGGCCGCCAATTTCTCTCATTaGGAACAGCTGTATTTACCC +
Preference number: 5 (lower is better)
Translates to: QGSFTLVKTGPGRQGRMAANFSH*EQLYLP
Trigger: GGGTAAATACAGCTGTTCCAAATGAGAGAAATTGGC...GGCCATCCTTCCCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR CAA 90 bp CAGACAGGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCCTGGACAAGAACAGAGCAGCTTaGGTATCCTGTTCACAGCAC +
Preference number: 5 (lower is better)
Translates to: QTGKDGLEHCDGGKCSLDKNRAA*VSCSQH
Trigger: GTGCTGTGAACAGGATACCAAAGCTGCTCTGTTCTT...GTCCAGGGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTGTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453258.6
CDS-3UTR CAA 90 bp AGCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGGAAGGATGGCTTTGATGGCATTGTaGATAGTTTCCAATACCCTG +
Preference number: 5 (lower is better)
Translates to: SQGSFTLVKTGPGRQGRMALMAL*IVSNTL
Trigger: CAGGGTATTGGAAACTATCAACAATGCCATCAAAGC...CATCCTTCCCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CAA 90 bp CAGACAGGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCCTGGACTGTGAAATGATAGCCTaGCAGAAGGAGGGAGAGAAT +
Preference number: 5 (lower is better)
Translates to: QTGKDGLEHCDGGKCSLDCEMIA*QKEGEN
Trigger: ATTCTCTCCCTCCTTCTGCAAGGCTATCATTTCACA...GTCCAGGGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTGTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CAA 90 bp CTGGAAGTCAAAGGGGTAGTTGCTGAGGCTCCTCTCCACCACATCCAGAACCCTTGTGAAATGATAGCCTaGCAGAAGGAGGGAGAGAAT +
Preference number: 5 (lower is better)
Translates to: LEVKGVVAEAPLHHIQNPCEMIA*QKEGEN
Trigger: ATTCTCTCCCTCCTTCTGCAAGGCTATCATTTCACA...AGGGTTCTGGATGTGGTGGAGAGGAGCCTCAGCAACTACCCCTTTGACTTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635076.1
CDS-3UTR CAA 90 bp CTTGAGCACACAGCGTGGTACACCACAAATGCTCAACCAACAGCAGCGATGACAAGGTGTGGACAATGGTaGCTCAGCTGGGATCATGTT +
Preference number: 5 (lower is better)
Translates to: LEHTAWYTTNAQPTAAMTRCGQW*LSWDHV
Trigger: AACATGATCCCAGCTGAGCAACCATTGTCCACACCT...TGTCATCGCTGCTGTTGGTTGAGCATTTGTGGTGTACCACGCTGTGTGCTCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR CAA 90 bp CCTGGCAGACAGGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCCTATCTGCCGAAGTCCTaGAGGCAAAGGATATTGAAT +
Preference number: 5 (lower is better)
Translates to: PGRQGRMALNTAMEENAPYLPKS*RQRILN
Trigger: ATTCAATATCCTTTGCCTCAAGGACTTCGGCAGATA...GGGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTGTCTGCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CAA 90 bp AGCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGGAAGGATGTATCTGCCGAAGTCCTaGAGGCAAAGGATATTGAAT +
Preference number: 5 (lower is better)
Translates to: SQGSFTLVKTGPGRQGRMYLPKS*RQRILN
Trigger: ATTCAATATCCTTTGCCTCAAGGACTTCGGCAGATA...CATCCTTCCCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CAA 90 bp GCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGGAAGGATGGGGAATATGTGATTTATaGACATACCTGCTTTGGGTG +
Preference number: 5 (lower is better)
Translates to: AKEASHSSRLALADREGWGICDL*TYLLWV
Trigger: CACCCAAAGCAGGTATGTCAATAAATCACATATTCC...CCATCCTTCCCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR CAA 90 bp AGTAAAAGCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGGAGTCTCAGATGAGACTTaGGACTGTGGACTTTTGGGT +
Preference number: 5 (lower is better)
Translates to: SKSQGSFTLVKTGPGRQGVSDET*DCGLLG
Trigger: ACCCAAAAGTCCACAGTCCAAAGTCTCATCTGAGAC...TCCCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGCTTTTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR CAA 90 bp GAAACATCACCAGTCAATCCTGCTCAACAGGTAACTCTTGCAGCAATCCTTAAGCACACAGAGTCCCTGTaGGGGCACTGCCTAGTGGAG +
Preference number: 5 (lower is better)
Translates to: ETSPVNPAQQVTLAAILKHTESL*GHCLVE
Trigger: CTCCACTAGGCAGTGCCCCAACAGGGACTCTGTGTG...CTTAAGGATTGCTGCAAGAGTTACCTGTTGAGCAGGATTGACTGGTGATGTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR CAA 90 bp GCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGGAAGGATGGTATAGATGTATAAACTaGTGTGAGAAGAACCCGCAT +
Preference number: 5 (lower is better)
Translates to: AKEASHSSRLALADREGWYRCIN*CEKNPH
Trigger: ATGCGGGTTCTTCTCACACAAGTTTATACATCTATA...CCATCCTTCCCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000639992.1
CDS-3UTR CAA 90 bp GCCATAGAGGCGAAATTGCAGAGCATTATCTGGGGACTCGATAGTCTGGTTTTGCCTGCATTCTTCTACTaGATGCACCACGCCTGTGTC +
Preference number: 5 (lower is better)
Translates to: AIEAKLQSIIWGLDSLVLPAFFY*MHHACV
Trigger: GACACAGGCGTGGTGCATCAAGTAGAAGAATGCAGG...CAAAACCAGACTATCGAGTCCCCAGATAATGCTCTGCAATTTCGCCTCTATGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000483213.6
ENST00000639992.1
CDS-3UTR CAA 90 bp GCTTCAGTAAAAGCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACCTCGATAGTCTGGTTTaGGGGTACAAAAGTGACTTG +
Preference number: 5 (lower is better)
Translates to: ASVKAKEASHSSRLALADLDSLV*GYKSDL
Trigger: CAAGTCACTTTTGTACCCCAAAACCAGACTATCGAG...GTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGCTTTTACTGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CAA 90 bp GGGTGCAGGGTCTCTTCATGTTTCCATGGTAAGGTCTATAGCTGCTGCTTCATGGCCATAGAGGCGAAATaGCAGAGCATTATCTGGGGA +
Preference number: 5 (lower is better)
Translates to: GCRVSSCFHGKVYSCCFMAIEAK*QSIIWG
Trigger: TCCCCAGATAATGCTCTGCAATTTCGCCTCTATGGC...CATGAAGCAGCAGCTATAGACCTTACCATGGAAACATGAAGAGACCCTGCACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR CAA 90 bp ACAGGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCCTGGACGATGAGCTCCAGGATGCTTaGATGGCATTGTTGATAGTT +
Preference number: 5 (lower is better)
Translates to: TGKDGLEHCDGGKCSLDDELQDA*MALLIV
Trigger: AACTATCAACAATGCCATCAAAGCATCCTGGAGCTC...ATCGTCCAGGGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CAA 90 bp TCAGTAAAAGCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGGAGCTCCAGGATGCTTaGATGGCATTGTTGATAGTT +
Preference number: 5 (lower is better)
Translates to: SVKAKEASHSSRLALADRELQDA*MALLIV
Trigger: AACTATCAACAATGCCATCAAAGCATCCTGGAGCTC...CCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGCTTTTACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CAA 90 bp TCAGTAAAAGCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGTGTGAAATGATAGCCTaGCAGAAGGAGGGAGAGAAT +
Preference number: 5 (lower is better)
Translates to: SVKAKEASHSSRLALADRCEMIA*QKEGEN
Trigger: ATTCTCTCCCTCCTTCTGCAAGGCTATCATTTCACA...CCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGCTTTTACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CAA 90 bp CAGGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCCTGGACGATTTGTGAAATGATAGCCTaGCAGAAGGAGGGAGAGAAT +
Preference number: 5 (lower is better)
Translates to: QGRMALNTAMEENAPWTICEMIA*QKEGEN
Trigger: ATTCTCTCCCTCCTTCTGCAAGGCTATCATTTCACA...AATCGTCCAGGGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CAA 90 bp GCCATAGAGGCGAAATTGCAGAGCATTATCTGGGGACTCGATAGTCTGGTTTTGTCGCTGCCCTGGATCTaGCCAATGAAATGGATGTGC +
Preference number: 5 (lower is better)
Translates to: AIEAKLQSIIWGLDSLVLSLPWI*PMKWMC
Trigger: GCACATCCATTTCATTGGCAAGATCCAGGGCAGCGA...CAAAACCAGACTATCGAGTCCCCAGATAATGCTCTGCAATTTCGCCTCTATGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CAA 90 bp CAGACAGGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCCTGGACTATCTGCCGAAGTCCTaGAGGCAAAGGATATTGAAT +
Preference number: 5 (lower is better)
Translates to: QTGKDGLEHCDGGKCSLDYLPKS*RQRILN
Trigger: ATTCAATATCCTTTGCCTCAAGGACTTCGGCAGATA...GTCCAGGGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTGTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CAA 90 bp TGGGAGCCCGAGGCAATAGGATCACCTGAGATTGGGAGTTGGAGACCAGCCTGGTCTCTAGACAATGTATaGATGATGCAAATGTTCTGG +
Preference number: 5 (lower is better)
Translates to: WEPEAIGSPEIGSWRPAWSLDNV*MMQMFW
Trigger: CCAGAACATTTGCATCATCAATACATTGTCTAGAGA...CCAGGCTGGTCTCCAACTCCCAATCTCAGGTGATCCTATTGCCTCGGGCTCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR CAA 90 bp GCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGGAAGGATGGTCTCTAGACAATGTATaGATGATGCAAATGTTCTGG +
Preference number: 5 (lower is better)
Translates to: AKEASHSSRLALADREGWSLDNV*MMQMFW
Trigger: CCAGAACATTTGCATCATCAATACATTGTCTAGAGA...CCATCCTTCCCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR CAA 90 bp TGGGAGCCCGAGGCAATAGGATCACCTGAGATTGGGAGTTGGAGACCAGCCTGGATCTTTATGGTACAGTaGGTTTCCATAGCTGTAAAC +
Preference number: 5 (lower is better)
Translates to: WEPEAIGSPEIGSWRPAWIFMVQ*VSIAVN
Trigger: GTTTACAGCTATGGAAACCAACTGTACCATAAAGAT...CCAGGCTGGTCTCCAACTCCCAATCTCAGGTGATCCTATTGCCTCGGGCTCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR CAA 90 bp TCAGTAAAAGCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGGCAACACTTTCAGACTaGGATCCTGCACATTCTGAT +
Preference number: 5 (lower is better)
Translates to: SVKAKEASHSSRLALADRATLSD*DPAHSD
Trigger: ATCAGAATGTGCAGGATCCAAGTCTGAAAGTGTTGC...CCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGCTTTTACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR CAA 90 bp CCCTGGCAGACAGGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCGTTGTCAAAAGTGACTaGATCATTCAAGAGATAGGG +
Preference number: 5 (lower is better)
Translates to: PWQTGKDGLEHCDGGKCSVVKSD*IIQEIG
Trigger: CCCTATCTCTTGAATGATCAAGTCACTTTTGACAAC...GGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTGTCTGCCAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR CAA 90 bp CTTGAGCACACAGCGTGGTACACCACAAATGCTCAACCAACAGCAGCGATGACATCTAGCAGCAACAGATaGGAAGCAACACCACCATTC +
Preference number: 5 (lower is better)
Translates to: LEHTAWYTTNAQPTAAMTSSSNR*EATPPF
Trigger: GAATGGTGGTGTTGCTTCCAATCTGTTGCTGCTAGA...TGTCATCGCTGCTGTTGGTTGAGCATTTGTGGTGTACCACGCTGTGTGCTCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR CAA 90 bp TGGGAGCCCGAGGCAATAGGATCACCTGAGATTGGGAGTTGGAGACCAGCCTGGAAATCTCAACTTGAATaGTACCTTCCAGAATTCCCA +
Preference number: 5 (lower is better)
Translates to: WEPEAIGSPEIGSWRPAWKSQLE*YLPEFP
Trigger: TGGGAATTCTGGAAGGTACAATTCAAGTTGAGATTT...CCAGGCTGGTCTCCAACTCCCAATCTCAGGTGATCCTATTGCCTCGGGCTCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR CAA 90 bp AGTAAAAGCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGGACTTCACGTTAGACTCTaGAAACCCGCTCGAAAAACT +
Preference number: 5 (lower is better)
Translates to: SKSQGSFTLVKTGPGRQGLHVRL*KPARKT
Trigger: AGTTTTTCGAGCGGGTTTCAAGAGTCTAACGTGAAG...TCCCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGCTTTTACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371207.8
CDS TCA 90 bp TCTATCATTCATTCATTCATTCTGGCTAGCGACCCAAGTACTGCCTaGGATAGCAATGGCATTGGCCTCCAGAGAGCCACCTCCATGGAT +
Preference number: 5 (lower is better)
Translates to: SIIHSFILASDPSTA*DSNGIGLQRATSMD
Trigger: ATCCATGGAGGTGGCTCTCTGGAGGCCAATGCCATTGCTATCTCAGGCAGTACTTGGGTCGCTAGCCAGAATGAATGAATGAATGATAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490659.5
CDS-3UTR CAA 90 bp GGGTGCAGGGTCTCTTCATGTTTCCATGGTAAGGTCTATAGCTGCTGCTTCATGTTTTCTGGCAATGCTTaGTTCTGGGTCAACCCCACA +
Preference number: 5 (lower is better)
Translates to: GCRVSSCFHGKVYSCCFMFSGNA*FWVNPT
Trigger: TGTGGGGTTGACCCAGAACAAAGCATTGCCAGAAAA...CATGAAGCAGCAGCTATAGACCTTACCATGGAAACATGAAGAGACCCTGCACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR CAA 90 bp GGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCCTGGACGATTTTCTCGATAGTCTGGTTTaGGGGTACAAAAGTGACTTG +
Preference number: 5 (lower is better)
Translates to: GKDGLEHCDGGKCSLDDFLDSLV*GYKSDL
Trigger: CAAGTCACTTTTGTACCCCAAAACCAGACTATCGAG...AAAATCGTCCAGGGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CAA 90 bp GAATGTCCTTGGCCAGTTTCTGCCAGAGTGCCTGATCCTTCCCATAGCACAAGACTCGATAGTCTGGTTTaGGGGTACAAAAGTGACTTG +
Preference number: 5 (lower is better)
Translates to: ECPWPVSARVPDPSHSTRLDSLV*GYKSDL
Trigger: CAAGTCACTTTTGTACCCCAAAACCAGACTATCGAG...TCTTGTGCTATGGGAAGGATCAGGCACTCTGGCAGAAACTGGCCAAGGACATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000483213.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CAA 90 bp CAGGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCCTGGACGATTGCTTTGATGGCATTGTaGATAGTTTCCAATACCCTG +
Preference number: 5 (lower is better)
Translates to: QGRMALNTAMEENAPWTIALMAL*IVSNTL
Trigger: CAGGGTATTGGAAACTATCAACAATGCCATCAAAGC...AATCGTCCAGGGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CAA 90 bp GGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCCTGGACGATTTTGAGCTCCAGGATGCTTaGATGGCATTGTTGATAGTT +
Preference number: 5 (lower is better)
Translates to: GKDGLEHCDGGKCSLDDFELQDA*MALLIV
Trigger: AACTATCAACAATGCCATCAAAGCATCCTGGAGCTC...AAAATCGTCCAGGGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CAA 90 bp AACCTGAATGTCCTTGGCCAGTTTCTGCCAGAGTGCCTGATCCTTCCCATAGCAGAGCTCCAGGATGCTTaGATGGCATTGTTGATAGTT +
Preference number: 5 (lower is better)
Translates to: NLNVLGQFLPECLILPIAELQDA*MALLIV
Trigger: AACTATCAACAATGCCATCAAAGCATCCTGGAGCTC...TGCTATGGGAAGGATCAGGCACTCTGGCAGAAACTGGCCAAGGACATTCAGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CAA 90 bp GACTTGCATGGACCCTGTAACCCCTTTGTTTTGGCCAATTTCTCTCATTTGGAACAGGGAAGGATGGCCTaGAACACTGCGATGGAGGAA +
Preference number: 5 (lower is better)
Translates to: DLHGPCNPFVLANFSHLEQGRMA*NTAMEE
Trigger: TTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTG...TTCCAAATGAGAGAAATTGGCCAAAACAAAGGGGTTACAGGGTCCATGCAAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR CAA 90 bp AGTAAAAGCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGGATATCTGCCGAAGTCCTaGAGGCAAAGGATATTGAAT +
Preference number: 5 (lower is better)
Translates to: SKSQGSFTLVKTGPGRQGYLPKS*RQRILN
Trigger: ATTCAATATCCTTTGCCTCAAGGACTTCGGCAGATA...TCCCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGCTTTTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CAA 90 bp TTTCCCCATCAGCTCAACAGTCAGTCCCCAGATCTAGAGATGGAGAGCTTGGGAATTGACATACCTGCTTaGGGTGGGATTGAGAACTGT +
Preference number: 5 (lower is better)
Translates to: FPHQLNSQSPDLEMESLGIDIPA*GGIENC
Trigger: ACAGTTCTCAATCCCACCCAAAGCAGGTATGTCAAT...TCCCAAGCTCTCCATCTCTAGATCTGGGGACTGACTGTTGAGCTGATGGGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR CAA 90 bp CAGACAGGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCCTGGACGTTGTCAAAAGTGACTaGATCATTCAAGAGATAGGG +
Preference number: 5 (lower is better)
Translates to: QTGKDGLEHCDGGKCSLDVVKSD*IIQEIG
Trigger: CCCTATCTCTTGAATGATCAAGTCACTTTTGACAAC...GTCCAGGGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTGTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR CAA 90 bp AGCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGGAAGGATGACCACAAGAAAGAATTaGAACATGTCCCAATTCGAA +
Preference number: 5 (lower is better)
Translates to: SQGSFTLVKTGPGRQGRMTTRKN*NMSQFE
Trigger: TTCGAATTGGGACATGTTCAAATTCTTTCTTGTGGT...CATCCTTCCCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR CAA 90 bp ACAGGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCCTGGACGATGTTTTAAGTGCATGCTaGGAAGTTATGAGGAGACAG +
Preference number: 5 (lower is better)
Translates to: TGKDGLEHCDGGKCSLDDVLSAC*EVMRRQ
Trigger: CTGTCTCCTCATAACTTCCAAGCATGCACTTAAAAC...ATCGTCCAGGGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR CAA 90 bp CTTGAGCACACAGCGTGGTACACCACAAATGCTCAACCAACAGCAGCGATGACACAGAGATGTCAAGAATaGAGATTTGGGAACCTCTGC +
Preference number: 5 (lower is better)
Translates to: LEHTAWYTTNAQPTAAMTQRCQE*RFGNLC
Trigger: GCAGAGGTTCCCAAATCTCAATTCTTGACATCTCTG...TGTCATCGCTGCTGTTGGTTGAGCATTTGTGGTGTACCACGCTGTGTGCTCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR CAA 90 bp CCTGGCAGACAGGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCCCATTCAAAAGGTGACTaGGGTGCTGTTAAAAACATT +
Preference number: 5 (lower is better)
Translates to: PGRQGRMALNTAMEENAPHSKGD*GAVKNI
Trigger: AATGTTTTTAACAGCACCCAAGTCACCTTTTGAATG...GGGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTGTCTGCCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS CCA 90 bp CCAGTCATCCATCCATCCATCCATCTATCATTCATTCATTCATTCTaGCTAGCGACCCAAGTACTGCCTGAGATAGCAATGGCATTGGCC +
Preference number: 5 (lower is better)
Translates to: PVIHPSIHLSFIHSF*LATQVLPEIAMALA
Trigger: GGCCAATGCCATTGCTATCTCAGGCAGTACTTGGGTCGCTAGCCAGAATGAATGAATGAATGATAGATGGATGGATGGATGGATGACTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490659.5
CDS-3UTR CAA 90 bp GTAGACATTGTAGTCCTTGCCATAGAGGCGAAATTGCAGAGCATTATCTGGGGAGCCATAGAGGCGAAATaGCAGAGCATTATCTGGGGA +
Preference number: 5 (lower is better)
Translates to: VDIVVLAIEAKLQSIIWGAIEAK*QSIIWG
Trigger: TCCCCAGATAATGCTCTGCAATTTCGCCTCTATGGC...TCCCCAGATAATGCTCTGCAATTTCGCCTCTATGGCAAGGACTACAATGTCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000483213.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CAA 90 bp TCAGTAAAAGCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGGATGCTTTGATGGCATaGTTGATAGTTTCCAATACC +
Preference number: 5 (lower is better)
Translates to: SVKAKEASHSSRLALADRDALMA*LIVSNT
Trigger: GGTATTGGAAACTATCAACAATGCCATCAAAGCATC...CCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGCTTTTACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CAA 90 bp ACAGGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCCTGGACGATGATGCTTTGATGGCATaGTTGATAGTTTCCAATACC +
Preference number: 5 (lower is better)
Translates to: TGKDGLEHCDGGKCSLDDDALMA*LIVSNT
Trigger: GGTATTGGAAACTATCAACAATGCCATCAAAGCATC...ATCGTCCAGGGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CAA 90 bp AGGGGGTCTTGTAAAGGTCACTTACGTTCACTACCTTCTTATATCCAGGATGAACAGGGAAGGATGGCCTaGAACACTGCGATGGAGGAA +
Preference number: 5 (lower is better)
Translates to: RGSCKGHLRSLPSYIQDEQGRMA*NTAMEE
Trigger: TTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTG...TTCATCCTGGATATAAGAAGGTAGTGAACGTAAGTGACCTTTACAAGACCCCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CAA 90 bp ACCAGAAAAGCAGTATTCACTCAGGTACTTCTCCTTTACTCCAGCGTAAGATGTCAGGGAAGGATGGCCTaGAACACTGCGATGGAGGAA +
Preference number: 5 (lower is better)
Translates to: TRKAVFTQVLLLYSSVRCQGRMA*NTAMEE
Trigger: TTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTG...ACATCTTACGCTGGAGTAAAGGAGAAGTACCTGAGTGAATACTGCTTTTCTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CAA 90 bp GAATGTCCTTGGCCAGTTTCTGCCAGAGTGCCTGATCCTTCCCATAGCACAAGATATCTGCCGAAGTCCTaGAGGCAAAGGATATTGAAT +
Preference number: 5 (lower is better)
Translates to: ECPWPVSARVPDPSHSTRYLPKS*RQRILN
Trigger: ATTCAATATCCTTTGCCTCAAGGACTTCGGCAGATA...TCTTGTGCTATGGGAAGGATCAGGCACTCTGGCAGAAACTGGCCAAGGACATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CAA 90 bp CTTGAGCACACAGCGTGGTACACCACAAATGCTCAACCAACAGCAGCGATGACAGTTTTAAGTGCATGCTaGGAAGTTATGAGGAGACAG +
Preference number: 5 (lower is better)
Translates to: LEHTAWYTTNAQPTAAMTVLSAC*EVMRRQ
Trigger: CTGTCTCCTCATAACTTCCAAGCATGCACTTAAAAC...TGTCATCGCTGCTGTTGGTTGAGCATTTGTGGTGTACCACGCTGTGTGCTCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR CAA 90 bp TCAGTAAAAGCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGATCATCGGCCACTATTaGATGTCAATCTACTATGCT +
Preference number: 5 (lower is better)
Translates to: SVKAKEASHSSRLALADRIIGHY*MSIYYA
Trigger: AGCATAGTAGATTGACATCAAATAGTGGCCGATGAT...CCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGCTTTTACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR CAA 90 bp TCAGTAAAAGCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGTCTCTTGCAGGGACCTaGACTGATACAACATTAAAA +
Preference number: 5 (lower is better)
Translates to: SVKAKEASHSSRLALADRSLAGT*TDTTLK
Trigger: TTTTAATGTTGTATCAGTCAAGGTCCCTGCAAGAGA...CCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGCTTTTACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR CAA 90 bp ACATCACCAGTCAATCCTGCTCAACAGGTAACTCTTGCAGCAATCCTTAAGGAAAGCTTCCATGTGATGTaGAGCCTGTGGGTGCAGAGA +
Preference number: 5 (lower is better)
Translates to: TSPVNPAQQVTLAAILKESFHVM*SLWVQR
Trigger: TCTCTGCACCCACAGGCTCAACATCACATGGAAGCT...TTCCTTAAGGATTGCTGCAAGAGTTACCTGTTGAGCAGGATTGACTGGTGATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR CAA 90 bp TCAGTAAAAGCCAAGGAAGCTTCACACTCGTCAAGACTGGCCCTGGCAGACAGGTCATATAGCAAGAGATaGTACTTCCATTCAGCTGGT +
Preference number: 5 (lower is better)
Translates to: SVKAKEASHSSRLALADRSYSKR*YFHSAG
Trigger: ACCAGCTGAATGGAAGTACAATCTCTTGCTATATGA...CCTGTCTGCCAGGGCCAGTCTTGACGAGTGTGAAGCTTCCTTGGCTTTTACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS TCA 90 bp AAAGTCAAGAACAGTTCTTCCCTCCCCATAAAGCCTCTGGTCCCATaGCCAGCAATCCTTTCTCAAGGCTCATTAGAGCAAAGAGCAACA +
Preference number: 5 (lower is better)
Translates to: KVKNSSSLPIKPLVP*PAILSQGSLEQRAT
Trigger: TGTTGCTCTTTGCTCTAATGAGCCTTGAGAAAGGATTGCTGGTCATGGGACCAGAGGCTTTATGGGGAGGGAAGAACTGTTCTTGACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371207.8
CDS GCA 90 bp AAATGCAGAAGGCATCTGAATGTCCTTGGCCAGTTTCTGCCAGAGTaGCTGATCCTTCCCATAGCACAAGAAGCTATGTGTGTAGACATT +
Preference number: 5 (lower is better)
Translates to: KCRRHLNVLGQFLPE*LILPIAQEAMCVDI
Trigger: AATGTCTACACACATAGCTTCTTGTGCTATGGGAAGGATCAGGCACTCTGGCAGAAACTGGCCAAGGACATTCAGATGCCTTCTGCATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422161.2
CDS-3UTR CAA 90 bp ATGAAAGAGACAGTATCTGCCGAAGTCCTTGAGGCAAAGGATATTGAATACCTCCCTGCATTCTTCTACTaGATGCACCACGCCTGTGTC +
Preference number: 5 (lower is better)
Translates to: MKETVSAEVLEAKDIEYLPAFFY*MHHACV
Trigger: GACACAGGCGTGGTGCATCAAGTAGAAGAATGCAGG...GAGGTATTCAATATCCTTTGCCTCAAGGACTTCGGCAGATACTGTCTCTTTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000639992.1
CDS-3UTR CAA 90 bp CCACCATTCCTGGTATCAGTCCAGGTAAAATATATTACAGCTCTTTACTGGAGCGTAAACGGGTGTCTCTaGGTGCTGGGACCTTGGAAT +
Preference number: 5 (lower is better)
Translates to: PPFLVSVQVKYITALYWSVNGCL*VLGPWN
Trigger: ATTCCAAGGTCCCAGCACCAAGAGACACCCGTTTAC...GCTCCAGTAAAGAGCTGTAATATATTTTACCTGGACTGATACCAGGAATGGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR CAA 90 bp ATCTGCTTTTTGCAAATCTCAGGTCTGAGTGTTCCACTCTGTAGCATTTGGGTAGTAAACGGGTGTCTCTaGGTGCTGGGACCTTGGAAT +
Preference number: 5 (lower is better)
Translates to: ICFLQISGLSVPLCSIWVVNGCL*VLGPWN
Trigger: ATTCCAAGGTCCCAGCACCAAGAGACACCCGTTTAC...TACCCAAATGCTACAGAGTGGAACACTCAGACCTGAGATTTGCAAAAAGCAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR CAA 90 bp GAAACATCACCAGTCAATCCTGCTCAACAGGTAACTCTTGCAGCAATCCTTAAGGCCATAGAGGCGAAATaGCAGAGCATTATCTGGGGA +
Preference number: 5 (lower is better)
Translates to: ETSPVNPAQQVTLAAILKAIEAK*QSIIWG
Trigger: TCCCCAGATAATGCTCTGCAATTTCGCCTCTATGGC...CTTAAGGATTGCTGCAAGAGTTACCTGTTGAGCAGGATTGACTGGTGATGTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR CAA 90 bp GCCGAAGTCCTTGAGGCAAAGGATATTGAATACCTCCAAAAGAAAGGCTTCAGTGCCATAGAGGCGAAATaGCAGAGCATTATCTGGGGA +
Preference number: 5 (lower is better)
Translates to: AEVLEAKDIEYLQKKGFSAIEAK*QSIIWG
Trigger: TCCCCAGATAATGCTCTGCAATTTCGCCTCTATGGC...ACTGAAGCCTTTCTTTTGGAGGTATTCAATATCCTTTGCCTCAAGGACTTCGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CAA 90 bp AATCCCATTGAAGGCACACTGGGAGTAAGGGCAGTAACTGGTGTTGAAGAGCTCGCTTTGATGGCATTGTaGATAGTTTCCAATACCCTG +
Preference number: 5 (lower is better)
Translates to: NPIEGTLGVRAVTGVEELALMAL*IVSNTL
Trigger: CAGGGTATTGGAAACTATCAACAATGCCATCAAAGC...GAGCTCTTCAACACCAGTTACTGCCCTTACTCCCAGTGTGCCTTCAATGGGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CAA 90 bp TTCCCACATGTTGTGGGAGGGACGCAGTGGGAGGTAATTGAATCATGGAGGCCAGGCTTTAGCACATATTaGCCTACTGTAGAAAATTCT +
Preference number: 5 (lower is better)
Translates to: FPHVVGGTQWEVIESWRPGFSTY*PTVENS
Trigger: AGAATTTTCTACAGTAGGCAAATATGTGCTAAAGCC...TGGCCTCCATGATTCAATTACCTCCCACTGCGTCCCTCCCACAACATGTGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR CAA 90 bp ACAGGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCCTGGACGATATTTACATCTGCTTTTaGCAAATCTCAGGTCTGAGT +
Preference number: 5 (lower is better)
Translates to: TGKDGLEHCDGGKCSLDDIYICF*QISGLS
Trigger: ACTCAGACCTGAGATTTGCAAAAAGCAGATGTAAAT...ATCGTCCAGGGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR CAA 90 bp CAGTTCCTGAGATTCTTCTTTCAGCCAGCTCAGCCTCCTATCACAGGACTCAAGCTACCCAGGATAGTCTaGTCTCTAGACAATGTATTG +
Preference number: 5 (lower is better)
Translates to: QFLRFFFQPAQPPITGLKLPRIV*SLDNVL
Trigger: CAATACATTGTCTAGAGACAAGACTATCCTGGGTAG...CTTGAGTCCTGTGATAGGAGGCTGAGCTGGCTGAAAGAAGAATCTCAGGAACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS GCA 90 bp TTGAGTTATACTTGCCTGAATGTCCTTGGCCAGTTTCTGCCAGAGTaGCTGATCCTTCCCATAGCACAAGAAGCTATGTGTGTAGACATT +
Preference number: 5 (lower is better)
Translates to: LSYTCLNVLGQFLPE*LILPIAQEAMCVDI
Trigger: AATGTCTACACACATAGCTTCTTGTGCTATGGGAAGGATCAGGCACTCTGGCAGAAACTGGCCAAGGACATTCAGGCAAGTATAACTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371206.6
CDS GCA 90 bp ACAAGATCTACCAGGACAACAACCCTGCTAGAACGGGGCTCTTCATaGTGTTTGCATGTTAGAAATATTCAGACCTTATGCAGAACAGGG +
Preference number: 5 (lower is better)
Translates to: TRSTRTTTLLERGSS*CLHVRNIQTLCRTG
Trigger: CCCTGTTCTGCATAAGGTCTGAATATTTCTAACATGCAAACAGCATGAAGAGCCCCGTTCTAGCAGGGTTGTTGTCCTGGTAGATCTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461927.1
CDS CCA 90 bp TCCAGCACAATCCCATACTTAACGTTTTCTGGCAATGCTTTGTTCTaGGTCAACCCCACAGCAAGCAAAGCTATCACAGCTATGATAGAG +
Preference number: 5 (lower is better)
Translates to: SSTIPYLTFSGNALF*VNPTASKAITAMIE
Trigger: CTCTATCATAGCTGTGATAGCTTTGCTTGCTGTGGGGTTGACCCAGAACAAAGCATTGCCAGAAAACGTTAAGTATGGGATTGTGCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371205.5
ENST00000371206.6
ENST00000371207.8
ENST00000453258.6
ENST00000490659.5
ENST00000635677.1
ENST00000639992.1
CDS-3UTR CAA 90 bp GGGAAGGATGGCCTTGAACACTGCGATGGAGGAAAATGCTCCCTGGACGATTTTTATAGATGTATAAACTaGTGTGAGAAGAACCCGCAT +
Preference number: 5 (lower is better)
Translates to: GKDGLEHCDGGKCSLDDFYRCIN*CEKNPH
Trigger: ATGCGGGTTCTTCTCACACAAGTTTATACATCTATA...AAAATCGTCCAGGGAGCATTTTCCTCCATCGCAGTGTTCAAGGCCATCCTTCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000543964.6
ENST00000639992.1
CDS-3UTR CAA 90 bp CAGTTCCTGAGATTCTTCTTTCAGCCAGCTCAGCCTCCTATCACAGGACTCAAGGATGCTTTGATGGCATaGTTGATAGTTTCCAATACC +
Preference number: 5 (lower is better)
Translates to: QFLRFFFQPAQPPITGLKDALMA*LIVSNT
Trigger: GGTATTGGAAACTATCAACAATGCCATCAAAGCATC...CTTGAGTCCTGTGATAGGAGGCTGAGCTGGCTGAAAGAAGAATCTCAGGAACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR CAA 90 bp TTTCCCCATCAGCTCAACAGTCAGTCCCCAGATCTAGAGATGGAGAGCTTGGGAACCACAAGAAAGAATTaGAACATGTCCCAATTCGAA +
Preference number: 5 (lower is better)
Translates to: FPHQLNSQSPDLEMESLGTTRKN*NMSQFE
Trigger: TTCGAATTGGGACATGTTCAAATTCTTTCTTGTGGT...TCCCAAGCTCTCCATCTCTAGATCTGGGGACTGACTGTTGAGCTGATGGGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR CAA 90 bp CAGTTCCTGAGATTCTTCTTTCAGCCAGCTCAGCCTCCTATCACAGGACTCAAGATCATCGGCCACTATTaGATGTCAATCTACTATGCT +
Preference number: 5 (lower is better)
Translates to: QFLRFFFQPAQPPITGLKIIGHY*MSIYYA
Trigger: AGCATAGTAGATTGACATCAAATAGTGGCCGATGAT...CTTGAGTCCTGTGATAGGAGGCTGAGCTGGCTGAAAGAAGAATCTCAGGAACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR CAA 90 bp CTATGGTTTCTGCCTACCCAGGATAGTCTTGTCTCTAGACAATGTATTGATGATAGGGGCCAGACCAGTTaGGGTGAAACTCAGTTCATC +
Preference number: 5 (lower is better)
Translates to: LWFLPTQDSLVSRQCIDDRGQTS*GETQFI
Trigger: GATGAACTGAGTTTCACCCAAACTGGTCTGGCCCCT...ATCATCAATACATTGTCTAGAGACAAGACTATCCTGGGTAGGCAGAAACCATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR CAA 90 bp ATCTGCTTTTTGCAAATCTCAGGTCTGAGTGTTCCACTCTGTAGCATTTGGGTACCACCAACTTGCATCTaGTGCCTGGAAAAGCTACAG +
Preference number: 5 (lower is better)
Translates to: ICFLQISGLSVPLCSIWVPPTCI*CLEKLQ
Trigger: CTGTAGCTTTTCCAGGCACAAGATGCAAGTTGGTGG...TACCCAAATGCTACAGAGTGGAACACTCAGACCTGAGATTTGCAAAAAGCAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR CAA 90 bp ACATCACCAGTCAATCCTGCTCAACAGGTAACTCTTGCAGCAATCCTTAAGGAATGGTATGCCTATAGATaGCAGAACCGAGGAGAAAGG +
Preference number: 5 (lower is better)
Translates to: TSPVNPAQQVTLAAILKEWYAYR*QNRGER
Trigger: CCTTTCTCCTCGGTTCTGCAATCTATAGGCATACCA...TTCCTTAAGGATTGCTGCAAGAGTTACCTGTTGAGCAGGATTGACTGGTGATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS TCA 90 bp TCTTCACTTTCCATCCTTTGCACATCCGGTAGAACACAAGCTCCATaGAGTCAGAGACTTTGTCCTGTTCACTGTTGTATCCTCAGTACT +
Preference number: 5 (lower is better)
Translates to: SSLSILCTSGRTQAP*SQRLCPVHCCILST
Trigger: AGTACTGAGGATACAACAGTGAACAGGACAAAGTCTCTGACTTCATGGAGCTTGTGTTCTACCGGATGTGCAAAGGATGGAAAGTGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494070.1
CDS CCA 90 bp ACTCTTCACTTTCCATCCTTAACGTTTTCTGGCAATGCTTTGTTCTaGGTCAACCCCACAGCAAGCAAAGCTATCACAGCTATGATAGAG +
Preference number: 5 (lower is better)
Translates to: TLHFPSLTFSGNALF*VNPTASKAITAMIE
Trigger: CTCTATCATAGCTGTGATAGCTTTGCTTGCTGTGGGGTTGACCCAGAACAAAGCATTGCCAGAAAACGTTAAGGATGGAAAGTGAAGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635076.1
CDS-3UTR CAA 90 bp AGACAGTATCTGCCGAAGTCCTTGAGGCAAAGGATATTGAATACCTCCAAAAGATTTTCTGGCAATGCTTaGTTCTGGGTCAACCCCACA +
Preference number: 5 (lower is better)
Translates to: RQYLPKSLRQRILNTSKRFSGNA*FWVNPT
Trigger: TGTGGGGTTGACCCAGAACAAAGCATTGCCAGAAAA...TCTTTTGGAGGTATTCAATATCCTTTGCCTCAAGGACTTCGGCAGATACTGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CAA 90 bp TACCAGAAAAGCAGTATTCACTCAGGTACTTCTCCTTTACTCCAGCGTAAGATGTTTTCTGGCAATGCTTaGTTCTGGGTCAACCCCACA +
Preference number: 5 (lower is better)
Translates to: YQKSSIHSGTSPLLQRKMFSGNA*FWVNPT
Trigger: TGTGGGGTTGACCCAGAACAAAGCATTGCCAGAAAA...CATCTTACGCTGGAGTAAAGGAGAAGTACCTGAGTGAATACTGCTTTTCTGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CAA 90 bp GAAGTCCTTGAGGCAAAGGATATTGAATACCTCCAAAAGAAAGGCTTCAGTAAAGTAAACGGGTGTCTCTaGGTGCTGGGACCTTGGAAT +
Preference number: 5 (lower is better)
Translates to: EVLEAKDIEYLQKKGFSKVNGCL*VLGPWN
Trigger: ATTCCAAGGTCCCAGCACCAAGAGACACCCGTTTAC...TTTACTGAAGCCTTTCTTTTGGAGGTATTCAATATCCTTTGCCTCAAGGACTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
CDS-3UTR CAA 90 bp GCCGAAGTCCTTGAGGCAAAGGATATTGAATACCTCCAAAAGAAAGGCTTCAGTCTCGATAGTCTGGTTTaGGGGTACAAAAGTGACTTG +
Preference number: 5 (lower is better)
Translates to: AEVLEAKDIEYLQKKGFSLDSLV*GYKSDL
Trigger: CAAGTCACTTTTGTACCCCAAAACCAGACTATCGAG...ACTGAAGCCTTTCTTTTGGAGGTATTCAATATCCTTTGCCTCAAGGACTTCGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CAA 90 bp GCCGAAGTCCTTGAGGCAAAGGATATTGAATACCTCCAAAAGAAAGGCTTCAGTGAGCTCCAGGATGCTTaGATGGCATTGTTGATAGTT +
Preference number: 5 (lower is better)
Translates to: AEVLEAKDIEYLQKKGFSELQDA*MALLIV
Trigger: AACTATCAACAATGCCATCAAAGCATCCTGGAGCTC...ACTGAAGCCTTTCTTTTGGAGGTATTCAATATCCTTTGCCTCAAGGACTTCGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CAA 90 bp GAAGTCCTTGAGGCAAAGGATATTGAATACCTCCAAAAGAAAGGCTTCAGTAAACAAACAAAGCCCATGTaGTGTGACGGGTGGCAACAC +
Preference number: 5 (lower is better)
Translates to: EVLEAKDIEYLQKKGFSKQTKPM*CDGWQH
Trigger: GTGTTGCCACCCGTCACACAACATGGGCTTTGTTTG...TTTACTGAAGCCTTTCTTTTGGAGGTATTCAATATCCTTTGCCTCAAGGACTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR CAA 90 bp CTGTTATTAGAATGGCCTGTCCAGAAGACAGCCAAATACATCCTTCAAACAGACCTAGAGATGGAGAGCTaGGGACAAGGTCAGAATGAA +
Preference number: 5 (lower is better)
Translates to: LLLEWPVQKTAKYILQTDLEMES*GQGQNE
Trigger: TTCATTCTGACCTTGTCCCAAGCTCTCCATCTCTAG...GTCTGTTTGAAGGATGTATTTGGCTGTCTTCTGGACAGGCCATTCTAATAACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR CAA 90 bp ACATCACCAGTCAATCCTGCTCAACAGGTAACTCTTGCAGCAATCCTTAAGGAACATTTGGCTTCCGGTTaGTGTGAGAGCTTTTCTTTC +
Preference number: 5 (lower is better)
Translates to: TSPVNPAQQVTLAAILKEHLASG*CESFSF
Trigger: GAAAGAAAAGCTCTCACACAAACCGGAAGCCAAATG...TTCCTTAAGGATTGCTGCAAGAGTTACCTGTTGAGCAGGATTGACTGGTGATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR CAA 90 bp GTATCTGCCGAAGTCCTTGAGGCAAAGGATATTGAATACCTCCAAAAGAAAGGCATAATTGGGGTTAGGTaGTGTCTGCTGATTGTCTCC +
Preference number: 5 (lower is better)
Translates to: VSAEVLEAKDIEYLQKKGIIGVR*CLLIVS
Trigger: GGAGACAATCAGCAGACACAACCTAACCCCAATTAT...GCCTTTCTTTTGGAGGTATTCAATATCCTTTGCCTCAAGGACTTCGGCAGATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR CAA 90 bp GGGTGCAGGGTCTCTTCATGTTTCCATGGTAAGGTCTATAGCTGCTGCTTCATGTTTTCTTTCTCTTTCTaGTCACACAGAAAGCCTGAT +
Preference number: 5 (lower is better)
Translates to: GCRVSSCFHGKVYSCCFMFSFSF*SHRKPD
Trigger: ATCAGGCTTTCTGTGTGACAAGAAAGAGAAAGAAAA...CATGAAGCAGCAGCTATAGACCTTACCATGGAAACATGAAGAGACCCTGCACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR CAA 90 bp GAAACATCACCAGTCAATCCTGCTCAACAGGTAACTCTTGCAGCAATCCTTAAGAGCAACTATTGGTATTaGAATCAGAGAGGGGCCAGA +
Preference number: 5 (lower is better)
Translates to: ETSPVNPAQQVTLAAILKSNYWY*NQRGAR
Trigger: TCTGGCCCCTCTCTGATTCAAATACCAATAGTTGCT...CTTAAGGATTGCTGCAAGAGTTACCTGTTGAGCAGGATTGACTGGTGATGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR CAA 90 bp ATCCTGCACATTCTGATGTGTAAATTCCACGATAGGGCAAAAGCATGCCACTCCGGCTATGGAAAGAAGTaGCAGACTGATGATGTCTTA +
Preference number: 5 (lower is better)
Translates to: ILHILMCKFHDRAKACHSGYGKK*QTDDVL
Trigger: TAAGACATCATCAGTCTGCAACTTCTTTCCATAGCC...GGAGTGGCATGCTTTTGCCCTATCGTGGAATTTACACATCAGAATGTGCAGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR CAA 90 bp ATGAAAGAGACAGTATCTGCCGAAGTCCTTGAGGCAAAGGATATTGAATACCTCCCTTGCCCTAGAGATTaGTGGAACTTAGAGCTTGAG +
Preference number: 5 (lower is better)
Translates to: MKETVSAEVLEAKDIEYLPCPRD*WNLELE
Trigger: CTCAAGCTCTAAGTTCCACAAATCTCTAGGGCAAGG...GAGGTATTCAATATCCTTTGCCTCAAGGACTTCGGCAGATACTGTCTCTTTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR CAA 90 bp TTTGGGTATCACCTAGGAATATGTGATTTATTGACATACCTGCTTTGGGTGGGACCTTGGTTCCCTTCATaGCAGCTTCCAGAAGAACAG +
Preference number: 5 (lower is better)
Translates to: FGYHLGICDLLTYLLWVGPWFPS*QLPEEQ
Trigger: CTGTTCTTCTGGAAGCTGCAATGAAGGGAACCAAGG...TCCCACCCAAAGCAGGTATGTCAATAAATCACATATTCCTAGGTGATACCCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453258.6
CDS-3UTR CAA 90 bp GAGGCAAAGGATATTGAATACCTCCAAAAGAAAGGCTTCAGTAAAAGCCAAGGATTTTCTGGCAATGCTTaGTTCTGGGTCAACCCCACA +
Preference number: 5 (lower is better)
Translates to: EAKDIEYLQKKGFSKSQGFSGNA*FWVNPT
Trigger: TGTGGGGTTGACCCAGAACAAAGCATTGCCAGAAAA...TCCTTGGCTTTTACTGAAGCCTTTCTTTTGGAGGTATTCAATATCCTTTGCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CAA 90 bp TCAAACTGCTGGAATGGAAGAGTCATCTCAAATCTCTTGGTGCAGGGGGTCTTGTATAGATGTATAAACTaGTGTGAGAAGAACCCGCAT +
Preference number: 5 (lower is better)
Translates to: SNCWNGRVISNLLVQGVLYRCIN*CEKNPH
Trigger: ATGCGGGTTCTTCTCACACAAGTTTATACATCTATA...CAAGACCCCCTGCACCAAGAGATTTGAGATGACTCTTCCATTCCAGCAGTTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000639992.1
CDS-3UTR CAA 90 bp ATGAAAGAGACAGTATCTGCCGAAGTCCTTGAGGCAAAGGATATTGAATACCTCATTGACATACCTGCTTaGGGTGGGATTGAGAACTGT +
Preference number: 5 (lower is better)
Translates to: MKETVSAEVLEAKDIEYLIDIPA*GGIENC
Trigger: ACAGTTCTCAATCCCACCCAAAGCAGGTATGTCAAT...GAGGTATTCAATATCCTTTGCCTCAAGGACTTCGGCAGATACTGTCTCTTTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR CAA 90 bp ATGAAAGAGACAGTATCTGCCGAAGTCCTTGAGGCAAAGGATATTGAATACCTCGCAACACTTTCAGACTaGGATCCTGCACATTCTGAT +
Preference number: 5 (lower is better)
Translates to: MKETVSAEVLEAKDIEYLATLSD*DPAHSD
Trigger: ATCAGAATGTGCAGGATCCAAGTCTGAAAGTGTTGC...GAGGTATTCAATATCCTTTGCCTCAAGGACTTCGGCAGATACTGTCTCTTTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR CAA 90 bp GGCAACTACCACAAGAAAGAATTTGAACATGTCCCAATTCGAATTTTGATTCCTCAAACAAAGCCCATGTaGTGTGACGGGTGGCAACAC +
Preference number: 5 (lower is better)
Translates to: GNYHKKEFEHVPIRILIPQTKPM*CDGWQH
Trigger: GTGTTGCCACCCGTCACACAACATGGGCTTTGTTTG...AGGAATCAAAATTCGAATTGGGACATGTTCAAATTCTTTCTTGTGGTAGTTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR CAA 90 bp GAGGCAAAGGATATTGAATACCTCCAAAAGAAAGGCTTCAGTAAAAGCCAAGGACTAGAGATGGAGAGCTaGGGACAAGGTCAGAATGAA +
Preference number: 5 (lower is better)
Translates to: EAKDIEYLQKKGFSKSQGLEMES*GQGQNE
Trigger: TTCATTCTGACCTTGTCCCAAGCTCTCCATCTCTAG...TCCTTGGCTTTTACTGAAGCCTTTCTTTTGGAGGTATTCAATATCCTTTGCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR CAA 90 bp CTATGGTTTCTGCCTACCCAGGATAGTCTTGTCTCTAGACAATGTATTGATGATGACCCTGTAACCCCTTaGTTTTGGCCAATTTCTCTC +
Preference number: 5 (lower is better)
Translates to: LWFLPTQDSLVSRQCIDDDPVTP*FWPISL
Trigger: GAGAGAAATTGGCCAAAACAAAGGGGTTACAGGGTC...ATCATCAATACATTGTCTAGAGACAAGACTATCCTGGGTAGGCAGAAACCATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR CAA 90 bp ATGCCAGATGTGCTTCCATCCAAAGCACATGAACAGAATGATATTAAATTACAAACTCCTTCTGCTGGCTaGTCAGGTCCTTGGTTCCCT +
Preference number: 5 (lower is better)
Translates to: MPDVLPSKAHEQNDIKLQTPSAG*SGPWFP
Trigger: AGGGAACCAAGGACCTGACAAGCCAGCAGAAGGAGT...TTGTAATTTAATATCATTCTGTTCATGTGCTTTGGATGGAAGCACATCTGGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453258.6
CDS-3UTR CAA 90 bp GTAGACATTGTAGTCCTTGCCATAGAGGCGAAATTGCAGAGCATTATCTGGGGATATAGATGTATAAACTaGTGTGAGAAGAACCCGCAT +
Preference number: 5 (lower is better)
Translates to: VDIVVLAIEAKLQSIIWGYRCIN*CEKNPH
Trigger: ATGCGGGTTCTTCTCACACAAGTTTATACATCTATA...TCCCCAGATAATGCTCTGCAATTTCGCCTCTATGGCAAGGACTACAATGTCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483213.6
ENST00000639992.1
CDS-3UTR CAA 90 bp ATCTGCTTTTTGCAAATCTCAGGTCTGAGTGTTCCACTCTGTAGCATTTGGGTAGCTTTGATGGCATTGTaGATAGTTTCCAATACCCTG +
Preference number: 5 (lower is better)
Translates to: ICFLQISGLSVPLCSIWVALMAL*IVSNTL
Trigger: CAGGGTATTGGAAACTATCAACAATGCCATCAAAGC...TACCCAAATGCTACAGAGTGGAACACTCAGACCTGAGATTTGCAAAAAGCAGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR CAA 90 bp AGACAGTATCTGCCGAAGTCCTTGAGGCAAAGGATATTGAATACCTCCAAAAGAGCTTTGATGGCATTGTaGATAGTTTCCAATACCCTG +
Preference number: 5 (lower is better)
Translates to: RQYLPKSLRQRILNTSKRALMAL*IVSNTL
Trigger: CAGGGTATTGGAAACTATCAACAATGCCATCAAAGC...TCTTTTGGAGGTATTCAATATCCTTTGCCTCAAGGACTTCGGCAGATACTGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CAA 90 bp TTGAGGCAAAGGATATTGAATACCTCCAAAAGAAAGGCTTCAGTAAAAGCCAAGCTGCTTTGGGTGGGATaGAGAACTGTATTGACTGCA +
Preference number: 5 (lower is better)
Translates to: LRQRILNTSKRKASVKAKLLWVG*RTVLTA
Trigger: TGCAGTCAATACAGTTCTCAATCCCACCCAAAGCAG...CTTGGCTTTTACTGAAGCCTTTCTTTTGGAGGTATTCAATATCCTTTGCCTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR CAA 90 bp GTATCTGCCGAAGTCCTTGAGGCAAAGGATATTGAATACCTCCAAAAGAAAGGCGGAATATGTGATTTATaGACATACCTGCTTTGGGTG +
Preference number: 5 (lower is better)
Translates to: VSAEVLEAKDIEYLQKKGGICDL*TYLLWV
Trigger: CACCCAAAGCAGGTATGTCAATAAATCACATATTCC...GCCTTTCTTTTGGAGGTATTCAATATCCTTTGCCTCAAGGACTTCGGCAGATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR CAA 90 bp AGACAGTATCTGCCGAAGTCCTTGAGGCAAAGGATATTGAATACCTCCAAAAGACTACCCAGGATAGTCTaGTCTCTAGACAATGTATTG +
Preference number: 5 (lower is better)
Translates to: RQYLPKSLRQRILNTSKRLPRIV*SLDNVL
Trigger: CAATACATTGTCTAGAGACAAGACTATCCTGGGTAG...TCTTTTGGAGGTATTCAATATCCTTTGCCTCAAGGACTTCGGCAGATACTGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR CAA 90 bp GAGGCAAAGGATATTGAATACCTCCAAAAGAAAGGCTTCAGTAAAAGCCAAGGACATTTGGCTTCCGGTTaGTGTGAGAGCTTTTCTTTC +
Preference number: 5 (lower is better)
Translates to: EAKDIEYLQKKGFSKSQGHLASG*CESFSF
Trigger: GAAAGAAAAGCTCTCACACAAACCGGAAGCCAAATG...TCCTTGGCTTTTACTGAAGCCTTTCTTTTGGAGGTATTCAATATCCTTTGCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR CAA 90 bp TTTGGGTATCACCTAGGAATATGTGATTTATTGACATACCTGCTTTGGGTGGGAATAATTGGGGTTAGGTaGTGTCTGCTGATTGTCTCC +
Preference number: 5 (lower is better)
Translates to: FGYHLGICDLLTYLLWVGIIGVR*CLLIVS
Trigger: GGAGACAATCAGCAGACACAACCTAACCCCAATTAT...TCCCACCCAAAGCAGGTATGTCAATAAATCACATATTCCTAGGTGATACCCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR CAA 90 bp AGACAGTATCTGCCGAAGTCCTTGAGGCAAAGGATATTGAATACCTCCAAAAGAGGCACCTCCTCACTATaGAAAAATCCATTATACCTG +
Preference number: 5 (lower is better)
Translates to: RQYLPKSLRQRILNTSKRGTSSL*KNPLYL
Trigger: CAGGTATAATGGATTTTTCAATAGTGAGGAGGTGCC...TCTTTTGGAGGTATTCAATATCCTTTGCCTCAAGGACTTCGGCAGATACTGTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR CAA 90 bp AGACAGTATCTGCCGAAGTCCTTGAGGCAAAGGATATTGAATACCTCCAAAAGATGTCTGATGGGGAGGTaGACTTTATTTTGTAGGCAA +
Preference number: 5 (lower is better)
Translates to: RQYLPKSLRQRILNTSKRCLMGR*TLFCRQ
Trigger: TTGCCTACAAAATAAAGTCAACCTCCCCATCAGACA...TCTTTTGGAGGTATTCAATATCCTTTGCCTCAAGGACTTCGGCAGATACTGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR CAA 90 bp GAGGCAAAGGATATTGAATACCTCCAAAAGAAAGGCTTCAGTAAAAGCCAAGGACAAGAGTATTCCAAGTaGAGAAGACAACCTGAGTGG +
Preference number: 5 (lower is better)
Translates to: EAKDIEYLQKKGFSKSQGQEYSK*RRQPEW
Trigger: CCACTCAGGTTGTCTTCTCAACTTGGAATACTCTTG...TCCTTGGCTTTTACTGAAGCCTTTCTTTTGGAGGTATTCAATATCCTTTGCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR CAA 90 bp GAAACATCACCAGTCAATCCTGCTCAACAGGTAACTCTTGCAGCAATCCTTAAGAAGAGACATTCTGACTaGGAAATTTGGAGAAGGCTT +
Preference number: 5 (lower is better)
Translates to: ETSPVNPAQQVTLAAILKKRHSD*EIWRRL
Trigger: AAGCCTTCTCCAAATTTCCAAGTCAGAATGTCTCTT...CTTAAGGATTGCTGCAAGAGTTACCTGTTGAGCAGGATTGACTGGTGATGTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR CAA 90 bp GTATCTGCCGAAGTCCTTGAGGCAAAGGATATTGAATACCTCCAAAAGAAAGGCAATGTGGAAGCAACTTaGGAACTGGGTGTTGAAATA +
Preference number: 5 (lower is better)
Translates to: VSAEVLEAKDIEYLQKKGNVEAT*ELGVEI
Trigger: TATTTCAACACCCAGTTCCAAAGTTGCTTCCACATT...GCCTTTCTTTTGGAGGTATTCAATATCCTTTGCCTCAAGGACTTCGGCAGATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR CAA 90 bp GAAGTCCTTGAGGCAAAGGATATTGAATACCTCCAAAAGAAAGGCTTCAGTAAATGTGAAATGATAGCCTaGCAGAAGGAGGGAGAGAAT +
Preference number: 5 (lower is better)
Translates to: EVLEAKDIEYLQKKGFSKCEMIA*QKEGEN
Trigger: ATTCTCTCCCTCCTTCTGCAAGGCTATCATTTCACA...TTTACTGAAGCCTTTCTTTTGGAGGTATTCAATATCCTTTGCCTCAAGGACTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CAA 90 bp ACTTTTTCATCATCTCAGTCACCTTTTCCTGAGAGACTTTCTCTGATGTCAAGTTGTGAAATGATAGCCTaGCAGAAGGAGGGAGAGAAT +
Preference number: 5 (lower is better)
Translates to: TFSSSQSPFPERLSLMSSCEMIA*QKEGEN
Trigger: ATTCTCTCCCTCCTTCTGCAAGGCTATCATTTCACA...ACTTGACATCAGAGAAAGTCTCTCAGGAAAAGGTGACTGAGATGATGAAAAAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CAA 90 bp GAAACATCACCAGTCAATCCTGCTCAACAGGTAACTCTTGCAGCAATCCTTAAGATTTACATCTGCTTTTaGCAAATCTCAGGTCTGAGT +
Preference number: 5 (lower is better)
Translates to: ETSPVNPAQQVTLAAILKIYICF*QISGLS
Trigger: ACTCAGACCTGAGATTTGCAAAAAGCAGATGTAAAT...CTTAAGGATTGCTGCAAGAGTTACCTGTTGAGCAGGATTGACTGGTGATGTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR CAA 90 bp GAAACATCACCAGTCAATCCTGCTCAACAGGTAACTCTTGCAGCAATCCTTAAGAAAGAAACACTTGGATaGTTGTATAAGAGGAGTGAG +
Preference number: 5 (lower is better)
Translates to: ETSPVNPAQQVTLAAILKKETLG*LYKRSE
Trigger: CTCACTCCTCTTATACAACAATCCAAGTGTTTCTTT...CTTAAGGATTGCTGCAAGAGTTACCTGTTGAGCAGGATTGACTGGTGATGTTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR CAA 90 bp AGACAGTATCTGCCGAAGTCCTTGAGGCAAAGGATATTGAATACCTCCAAAAGATGTAACCCCTTTGTTTaGGCCAATTTCTCTCATTTG +
Preference number: 5 (lower is better)
Translates to: RQYLPKSLRQRILNTSKRCNPFV*ANFSHL
Trigger: CAAATGAGAGAAATTGGCCAAAACAAAGGGGTTACA...TCTTTTGGAGGTATTCAATATCCTTTGCCTCAAGGACTTCGGCAGATACTGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR CAA 90 bp GGCAACTACCACAAGAAAGAATTTGAACATGTCCCAATTCGAATTTTGATTCCTCTCGATAGTCTGGTTTaGGGGTACAAAAGTGACTTG +
Preference number: 5 (lower is better)
Translates to: GNYHKKEFEHVPIRILIPLDSLV*GYKSDL
Trigger: CAAGTCACTTTTGTACCCCAAAACCAGACTATCGAG...AGGAATCAAAATTCGAATTGGGACATGTTCAAATTCTTTCTTGTGGTAGTTGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR CAA 90 bp AAAGCAGTATTCACTCAGGTACTTCTCCTTTACTCCAGCGTAAGATGTTTTTATCTCGATAGTCTGGTTTaGGGGTACAAAAGTGACTTG +
Preference number: 5 (lower is better)
Translates to: KAVFTQVLLLYSSVRCFYLDSLV*GYKSDL
Trigger: CAAGTCACTTTTGTACCCCAAAACCAGACTATCGAG...ATAAAAACATCTTACGCTGGAGTAAAGGAGAAGTACCTGAGTGAATACTGCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CAA 90 bp GAAGTCCTTGAGGCAAAGGATATTGAATACCTCCAAAAGAAAGGCTTCAGTAAAGCTTTGATGGCATTGTaGATAGTTTCCAATACCCTG +
Preference number: 5 (lower is better)
Translates to: EVLEAKDIEYLQKKGFSKALMAL*IVSNTL
Trigger: CAGGGTATTGGAAACTATCAACAATGCCATCAAAGC...TTTACTGAAGCCTTTCTTTTGGAGGTATTCAATATCCTTTGCCTCAAGGACTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CAA 90 bp GAGGCAAAGGATATTGAATACCTCCAAAAGAAAGGCTTCAGTAAAAGCCAAGGAGATGCTTTGATGGCATaGTTGATAGTTTCCAATACC +
Preference number: 5 (lower is better)
Translates to: EAKDIEYLQKKGFSKSQGDALMA*LIVSNT
Trigger: GGTATTGGAAACTATCAACAATGCCATCAAAGCATC...TCCTTGGCTTTTACTGAAGCCTTTCTTTTGGAGGTATTCAATATCCTTTGCCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CAA 90 bp ATGAAAGAGACAGTATCTGCCGAAGTCCTTGAGGCAAAGGATATTGAATACCTCTTTTCTTTCTCTTTCTaGTCACACAGAAAGCCTGAT +
Preference number: 5 (lower is better)
Translates to: MKETVSAEVLEAKDIEYLFSFSF*SHRKPD
Trigger: ATCAGGCTTTCTGTGTGACAAGAAAGAGAAAGAAAA...GAGGTATTCAATATCCTTTGCCTCAAGGACTTCGGCAGATACTGTCTCTTTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR CAA 90 bp ATCTGCTTTTTGCAAATCTCAGGTCTGAGTGTTCCACTCTGTAGCATTTGGGTACCAATTAAACCCTTTTaGTTTCCAGTCTCAGATATG +
Preference number: 5 (lower is better)
Translates to: ICFLQISGLSVPLCSIWVPIKPF*FPVSDM
Trigger: CATATCTGAGACTGGAAACAAAAAGGGTTTAATTGG...TACCCAAATGCTACAGAGTGGAACACTCAGACCTGAGATTTGCAAAAAGCAGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR CAA 90 bp GAAGTCCTTGAGGCAAAGGATATTGAATACCTCCAAAAGAAAGGCTTCAGTAAAGATGCTTTGATGGCATaGTTGATAGTTTCCAATACC +
Preference number: 5 (lower is better)
Translates to: EVLEAKDIEYLQKKGFSKDALMA*LIVSNT
Trigger: GGTATTGGAAACTATCAACAATGCCATCAAAGCATC...TTTACTGAAGCCTTTCTTTTGGAGGTATTCAATATCCTTTGCCTCAAGGACTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CAA 90 bp ATGCCAGATGTGCTTCCATCCAAAGCACATGAACAGAATGATATTAAATTACAAGAGCTCCAGGATGCTTaGATGGCATTGTTGATAGTT +
Preference number: 5 (lower is better)
Translates to: MPDVLPSKAHEQNDIKLQELQDA*MALLIV
Trigger: AACTATCAACAATGCCATCAAAGCATCCTGGAGCTC...TTGTAATTTAATATCATTCTGTTCATGTGCTTTGGATGGAAGCACATCTGGCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR CAA 90 bp TTTGGGTATCACCTAGGAATATGTGATTTATTGACATACCTGCTTTGGGTGGGAATCTTTATGGTACAGTaGGTTTCCATAGCTGTAAAC +
Preference number: 5 (lower is better)
Translates to: FGYHLGICDLLTYLLWVGIFMVQ*VSIAVN
Trigger: GTTTACAGCTATGGAAACCAACTGTACCATAAAGAT...TCCCACCCAAAGCAGGTATGTCAATAAATCACATATTCCTAGGTGATACCCAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR CAA 90 bp AAGTCCTTGAGGCAAAGGATATTGAATACCTCCAAAAGAAAGGCTTCAGTAAAAATGGAGATGAAGACCTaGTTGGGAACTGAAGTAAAG +
Preference number: 5 (lower is better)
Translates to: KSLRQRILNTSKRKASVKMEMKT*LGTEVK
Trigger: CTTTACTTCAGTTCCCAACAAGGTCTTCATCTCCAT...TTTTACTGAAGCCTTTCTTTTGGAGGTATTCAATATCCTTTGCCTCAAGGACTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR CAA 90 bp TTGAGGCAAAGGATATTGAATACCTCCAAAAGAAAGGCTTCAGTAAAAGCCAAGTATAGATGTATAAACTaGTGTGAGAAGAACCCGCAT +
Preference number: 5 (lower is better)
Translates to: LRQRILNTSKRKASVKAKYRCIN*CEKNPH
Trigger: ATGCGGGTTCTTCTCACACAAGTTTATACATCTATA...CTTGGCTTTTACTGAAGCCTTTCTTTTGGAGGTATTCAATATCCTTTGCCTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000639992.1
CDS-3UTR CAA 90 bp AAGTCCTTGAGGCAAAGGATATTGAATACCTCCAAAAGAAAGGCTTCAGTAAAAGATGCTTTGATGGCATaGTTGATAGTTTCCAATACC +
Preference number: 5 (lower is better)
Translates to: KSLRQRILNTSKRKASVKDALMA*LIVSNT
Trigger: GGTATTGGAAACTATCAACAATGCCATCAAAGCATC...TTTTACTGAAGCCTTTCTTTTGGAGGTATTCAATATCCTTTGCCTCAAGGACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000371205.5
ENST00000371207.8
ENST00000453258.6
ENST00000635076.1
ENST00000639992.1
CDS-3UTR CAA 90 bp TTGAGGCAAAGGATATTGAATACCTCCAAAAGAAAGGCTTCAGTAAAAGCCAAGGGCTTTAGCACATATTaGCCTACTGTAGAAAATTCT +
Preference number: 5 (lower is better)
Translates to: LRQRILNTSKRKASVKAKGFSTY*PTVENS
Trigger: AGAATTTTCTACAGTAGGCAAATATGTGCTAAAGCC...CTTGGCTTTTACTGAAGCCTTTCTTTTGGAGGTATTCAATATCCTTTGCCTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS-3UTR CAA 90 bp CTGCTCTGCCATGTAGTAGTTTGTGTGATCCTCATTTGTAAAATGGAAATACTATTCTTCATTTTTCTCTaGCTGCTGCCGTGTAAGAAA +
Preference number: 5 (lower is better)
Translates to: LLCHVVVCVILICKMEILFFIFL*LLPCKK
Trigger: TTTCTTACACGGCAGCAGCAAGAGAAAAATGAAGAA...TAGTATTTCCATTTTACAAATGAGGATCACACAAACTACTACATGGCAGAGCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371205.5
CDS-3UTR CAA 90 bp AGTATAGGCAACTACCACAAGAAAGAATTTGAACATGTCCCAATTCGAATTTTGGGAATAAGAAAAGATTaGTGTTCTCTGAAGGAGACT +
Preference number: 5 (lower is better)
Translates to: SIGNYHKKEFEHVPIRILGIRKD*CSLKET
Trigger: AGTCTCCTTCAGAGAACACAAATCTTTTCTTATTCC...CAAAATTCGAATTGGGACATGTTCAAATTCTTTCTTGTGGTAGTTGCCTATACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371205.5
ENST00000453258.6
CDS CAA 90 bp GCCCAGCAGATAGTTGATAGTAATCCAGCCATAGGCACCTTCCTCTaGGCCAGTAATGATCCTGGCACCCTGAGCAACCGCATGCCTGCC +
Preference number: 6 (lower is better)
Translates to: AQQIVDSNPAIGTFL*ASNDPGTLSNRMPA
Trigger: GGCAGGCATGCGGTTGCTCAGGGTGCCAGGATCATTACTGGCCAAGAGGAAGGTGCCTATGGCTGGATTACTATCAACTATCTGCTGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483213.6
CDS TCA 72 bp CATTCATTCATTCTGGCTAGCGACCCAAGTACTGCCTaGGATAGCAATGGCATTGGCCTCCAGAGAGCCACC +
Preference number: 6 (lower is better)
Translates to: HSFILASDPSTA*DSNGIGLQRAT
Trigger: GGTGGCTCTCTGGAGGCCAATGCCATTGCTATCTCAGGCAGTACTTGGGTCGCTAGCCAGAATGAATGAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490659.5
CDS CCA 72 bp CAGGTCTGGATTGAGTTATACTTGCCTGAATGTCCTTaGCCAGTTTCTGCCAGAGTGCCTGATCCTTCCCAT +
Preference number: 6 (lower is better)
Translates to: QVWIELYLPECP*PVSARVPDPSH
Trigger: ATGGGAAGGATCAGGCACTCTGGCAGAAACTGGCCAAGGACATTCAGGCAAGTATAACTCAATCCAGACCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371206.6
CDS CAA 90 bp CAAAATGTCTTCACGTTAGACTCCTTCTGCTGGCTTGTCAGGTCCTaGGTTCCCTTCATTGCAGCTTCCAGAAGAACAGAGCAGCTTTGG +
Preference number: 6 (lower is better)
Translates to: QNVFTLDSFCWLVRS*VPFIAASRRTEQLW
Trigger: CCAAAGCTGCTCTGTTCTTCTGGAAGCTGCAATGAAGGGAACCAAGGACCTGACAAGCCAGCAGAAGGAGTCTAACGTGAAGACATTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453258.6
CDS TCA 72 bp AACAGTTCTTCCCTCCCCATAAAGCCTCTGGTCCCATaGCCAGCAATCCTTTCTCAAGGCTCATTAGAGCAA +
Preference number: 6 (lower is better)
Translates to: NSSSLPIKPLVP*PAILSQGSLEQ
Trigger: TTGCTCTAATGAGCCTTGAGAAAGGATTGCTGGTCATGGGACCAGAGGCTTTATGGGGAGGGAAGAACTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371207.8
CDS CCA 72 bp TTGGAGCAAAATGTCTTCACGTTAGACTCCTTCTGCTaGCTTGTCAGGTCCTTGGTTCCCTTCATTGCAGCT +
Preference number: 6 (lower is better)
Translates to: LEQNVFTLDSFC*LVRSLVPFIAA
Trigger: AGCTGCAATGAAGGGAACCAAGGACCTGACAAGCCAGCAGAAGGAGTCTAACGTGAAGACATTTTGCTCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453258.6
CDS CAA 90 bp TCTACCAGGACAACAACCCTGCTAGAACGGGGCTCTTCATGCTGTTaGCATGTTAGAAATATTCAGACCTTATGCAGAACAGGGCCCAAG +
Preference number: 6 (lower is better)
Translates to: STRTTTLLERGSSCC*HVRNIQTLCRTGPK
Trigger: CTTGGGCCCTGTTCTGCATAAGGTCTGAATATTTCTAACATGCAAACAGCATGAAGAGCCCCGTTCTAGCAGGGTTGTTGTCCTGGTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461927.1
CDS TCA 72 bp TCCATCCTTTGCACATCCGGTAGAACACAAGCTCCATaGAGTCAGAGACTTTGTCCTGTTCACTGTTGTATC +
Preference number: 6 (lower is better)
Translates to: SILCTSGRTQAP*SQRLCPVHCCI
Trigger: GATACAACAGTGAACAGGACAAAGTCTCTGACTTCATGGAGCTTGTGTTCTACCGGATGTGCAAAGGATGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494070.1
CDS GCA 72 bp ACCAGGACAACAACCCTGCTAGAACGGGGCTCTTCATaGTGTTTGCATGTTAGAAATATTCAGACCTTATGC +
Preference number: 6 (lower is better)
Translates to: TRTTTLLERGSS*CLHVRNIQTLC
Trigger: GCATAAGGTCTGAATATTTCTAACATGCAAACAGCATGAAGAGCCCCGTTCTAGCAGGGTTGTTGTCCTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461927.1
CDS CAA 72 bp AGCACAATCCCATACTTAACGTTTTCTGGCAATGCTTaGTTCTGGGTCAACCCCACAGCAAGCAAAGCTATC +
Preference number: 6 (lower is better)
Translates to: STIPYLTFSGNA*FWVNPTASKAI
Trigger: GATAGCTTTGCTTGCTGTGGGGTTGACCCAGAACAAAGCATTGCCAGAAAACGTTAAGTATGGGATTGTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000371205.5
ENST00000371206.6
ENST00000371207.8
ENST00000453258.6
ENST00000490659.5
ENST00000635677.1
ENST00000639992.1
CDS CAA 72 bp CTTCACTTTCCATCCTTTAACCCTGCATTCTTCTACTaGATGCACCACGCCTGTGTCATTCTCCTTTTCTGC +
Preference number: 6 (lower is better)
Translates to: LHFPSFNPAFFY*MHHACVILLFC
Trigger: GCAGAAAAGGAGAATGACACAGGCGTGGTGCATCAAGTAGAAGAATGCAGGGTTAAAGGATGGAAAGTGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635677.1
ENST00000639992.1
CDS CAA 72 bp CTTCACTTTCCATCCTTAACGTTTTCTGGCAATGCTTaGTTCTGGGTCAACCCCACAGCAAGCAAAGCTATC +
Preference number: 6 (lower is better)
Translates to: LHFPSLTFSGNA*FWVNPTASKAI
Trigger: GATAGCTTTGCTTGCTGTGGGGTTGACCCAGAACAAAGCATTGCCAGAAAACGTTAAGGATGGAAAGTGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635076.1
CDS TCA 72 bp TCATTATCAACCCCACGAGGGGGAGAAATTATTTCCTaGGAGAAGATCTCAGTTGTGTCTGTGGAGATAACG +
Preference number: 6 (lower is better)
Translates to: SLSTPRGGEIIS*EKISVVSVEIT
Trigger: CGTTATCTCCACAGACACAACTGAGATCTTCTCTCAGGAAATAATTTCTCCCCCTCGTGGGGTTGATAATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371206.6
CDS TCA 72 bp TTCACTTTCCATCCTTTAACCCTGCATTCTTCTACTTaGTGCACCACGCCTGTGTCATTCTCCTTTTCTGCT +
Preference number: 6 (lower is better)
Translates to: FTFHPLTLHSST*CTTPVSFSFSA
Trigger: AGCAGAAAAGGAGAATGACACAGGCGTGGTGCATCAAGTAGAAGAATGCAGGGTTAAAGGATGGAAAGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000635677.1
ENST00000639992.1
CDS CAA 90 bp CAGCACAATCCCATACTTATGCAGAACAGGGCCCAAGAAGCAGTATaGTTTAGAAGCTTCTTAGGTGATTCTAATGTGCAGCCAAGATTC +
Preference number: 6 (lower is better)
Translates to: QHNPILMQNRAQEAV*FRSFLGDSNVQPRF
Trigger: GAATCTTGGCTGCACATTAGAATCACCTAAGAAGCTTCTAAACAATACTGCTTCTTGGGCCCTGTTCTGCATAAGTATGGGATTGTGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494070.1
CDS GCA 72 bp TCATGCTGTTTGCATGTTAGAAATATTCAGACCTTATaGAGAACAGGGCCCAAGAAGCAGTATTGTTTAGAA +
Preference number: 6 (lower is better)
Translates to: SCCLHVRNIQTL*RTGPKKQYCLE
Trigger: TTCTAAACAATACTGCTTCTTGGGCCCTGTTCTGCATAAGGTCTGAATATTTCTAACATGCAAACAGCATGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461927.1