RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ENPP7 (Homo sapiens)

Ensembl gene IDs: ENSG00000182156

Ensembl transcript IDs: ENST00000328313.10, ENST00000576512.1

Found 262 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGCAGGTTCCAGCGCCCGCAGAGCTCCCGCGCGCCCCCGCGTGGCTaGAGACGGCAGCGCCGCTTCGGGAGCGGGTTTTGCAGGAGGAGG +
Preference number: 1 (lower is better)
Translates to: CRFQRPQSSRAPPRG*RRQRRFGSGFCRRR
Trigger: CCTCCTCCTGCAAAACCCGCTCCCGAAGCGGCGCTGCCGTCTGCAGCCACGCGGGGGCGCGCGGGAGCTCTGCGGGCGCTGGAACCTGCA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328313.10
3UTR CCA 90 bp GGTCTGCAGGTTCCAGCGCCCGCAGAGCTCCCGCGCGCCCCCGCGTaGCTGCAGACGGCAGCGCCGCTTCGGGAGCGGGTTTTGCAGGAG +
Preference number: 1 (lower is better)
Translates to: GLQVPAPAELPRAPA*LQTAAPLRERVLQE
Trigger: CTCCTGCAAAACCCGCTCCCGAAGCGGCGCTGCCGTCTGCAGCCACGCGGGGGCGCGCGGGAGCTCTGCGGGCGCTGGAACCTGCAGACC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328313.10
3UTR CCA 90 bp GGCAGGGGGCCGGTTATGGGACCGGCTCGCCGGGGGCTCTGGACCTaGGCTGCGAGGCTTATTACCAGCACCATAACAGCCAAGCAGGGG +
Preference number: 1 (lower is better)
Translates to: GRGPVMGPARRGLWT*AARLITSTITAKQG
Trigger: CCCCTGCTTGGCTGTTATGGTGCTGGTAATAAGCCTCGCAGCCCAGGTCCAGAGCCCCCGGCGAGCCGGTCCCATAACCGGCCCCCTGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000328313.10
3UTR CCA 90 bp CCCGCCACTGGAATGTCCGGCTGGGTCCTGCAGCCACCTCCAAACTaGCCACTTCCTGCTCCCGTTTCTGTCCCCGGCCCAGCAGTGGGA +
Preference number: 1 (lower is better)
Translates to: PATGMSGWVLQPPPN*PLPAPVSVPGPAVG
Trigger: TCCCACTGCTGGGCCGGGGACAGAAACGGGAGCAGGAAGTGGCCAGTTTGGAGGTGGCTGCAGGACCCAGCCGGACATTCCAGTGGCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576512.1
3UTR CCA 90 bp CCTCAGCTTGGGGCTCCCCGCTGTGCATCCCACAACCTCCTGCCTTaGGGCTGTGGTCAGCTCCTGTTAGAGCCTCGCTCTGTGCCAACC +
Preference number: 1 (lower is better)
Translates to: PQLGAPRCASHNLLP*GCGQLLLEPRSVPT
Trigger: GGTTGGCACAGAGCGAGGCTCTAACAGGAGCTGACCACAGCCCCAAGGCAGGAGGTTGTGGGATGCACAGCGGGGAGCCCCAAGCTGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576512.1
3UTR CCA 90 bp TGGGGGAGGGTGGGAATTCTGGCCACTGGTCCGGGTGGTCTGCTCTaGAAAGACCTCCTCCAAGCCCAGAGCAGAGAGGCTGGAAGGGTC +
Preference number: 1 (lower is better)
Translates to: WGRVGILATGPGGLL*KDLLQAQSREAGRV
Trigger: GACCCTTCCAGCCTCTCTGCTCTGGGCTTGGAGGAGGTCTTTCCAGAGCAGACCACCCGGACCAGTGGCCAGAATTCCCACCCTCCCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576512.1
3UTR CCA 90 bp TGGTCTGCTCTGGAAAGACCTCCTCCAAGCCCAGAGCAGAGAGGCTaGAAGGGTCAGCCTCGGGATCTCAGGGGTGATGGCCTCTCTGGG +
Preference number: 1 (lower is better)
Translates to: WSALERPPPSPEQRG*KGQPRDLRGDGLSG
Trigger: CCCAGAGAGGCCATCACCCCTGAGATCCCGAGGCTGACCCTTCCAGCCTCTCTGCTCTGGGCTTGGAGGAGGTCTTTCCAGAGCAGACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576512.1
3UTR CCA 90 bp CTGTGCACATTGCAGCTTCTCCACCCCGCCACTGGAATGTCCGGCTaGGTCCTGCAGCCACCTCCAAACTGGCCACTTCCTGCTCCCGTT +
Preference number: 1 (lower is better)
Translates to: LCTLQLLHPATGMSG*VLQPPPNWPLPAPV
Trigger: AACGGGAGCAGGAAGTGGCCAGTTTGGAGGTGGCTGCAGGACCCAGCCGGACATTCCAGTGGCGGGGTGGAGAAGCTGCAATGTGCACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576512.1
3UTR TCA 90 bp TCCCTAAATCCACCTTCTCAGAGAGGCCATTCCAGGCCGGGCAAATaGCAAGGTCGCGCCTGCCTCGTCCCTGCCTGTGGCCGTCTCTTC +
Preference number: 1 (lower is better)
Translates to: SLNPPSQRGHSRPGK*QGRACLVPACGRLF
Trigger: GAAGAGACGGCCACAGGCAGGGACGAGGCAGGCGCGACCTTGTCATTTGCCCGGCCTGGAATGGCCTCTCTGAGAAGGTGGATTTAGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576512.1
3UTR GCA 90 bp GCTTTTGGGGGAGGGTGGGAATTCTGGCCACTGGTCCGGGTGGTCTaGTCTGGAAAGACCTCCTCCAAGCCCAGAGCAGAGAGGCTGGAA +
Preference number: 1 (lower is better)
Translates to: AFGGGWEFWPLVRVV*SGKTSSKPRAERLE
Trigger: TTCCAGCCTCTCTGCTCTGGGCTTGGAGGAGGTCTTTCCAGAGCAGACCACCCGGACCAGTGGCCAGAATTCCCACCCTCCCCCAAAAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000576512.1
3UTR GCA 90 bp ACGCCGAACCTGTCCCACCGCGGGCCTGTCCCTGGCTCTTTCCCCTaGCTGGTGTGTCTGGCTTCTTCTGGTGTGTCTGTCATTCTGGTT +
Preference number: 1 (lower is better)
Translates to: TPNLSHRGPVPGSFP*LVCLASSGVSVILV
Trigger: AACCAGAATGACAGACACACCAGAAGAAGCCAGACACACCAGGCAGGGGAAAGAGCCAGGGACAGGCCCGCGGTGGGACAGGTTCGGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576512.1
3UTR CCA 90 bp TTCTGGCTTTTGGGGGAGGGTGGGAATTCTGGCCACTGGTCCGGGTaGTCTGCTCTGGAAAGACCTCCTCCAAGCCCAGAGCAGAGAGGC +
Preference number: 1 (lower is better)
Translates to: FWLLGEGGNSGHWSG*SALERPPPSPEQRG
Trigger: GCCTCTCTGCTCTGGGCTTGGAGGAGGTCTTTCCAGAGCAGACCACCCGGACCAGTGGCCAGAATTCCCACCCTCCCCCAAAAGCCAGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000576512.1
3UTR CCA 90 bp CTGAGGGAGTTCTGGCTTTTGGGGGAGGGTGGGAATTCTGGCCACTaGTCCGGGTGGTCTGCTCTGGAAAGACCTCCTCCAAGCCCAGAG +
Preference number: 1 (lower is better)
Translates to: LREFWLLGEGGNSGH*SGWSALERPPPSPE
Trigger: CTCTGGGCTTGGAGGAGGTCTTTCCAGAGCAGACCACCCGGACCAGTGGCCAGAATTCCCACCCTCCCCCAAAAGCCAGAACTCCCTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000576512.1
3UTR CCA 90 bp CCAGAGGCTGAGGGAGTTCTGGCTTTTGGGGGAGGGTGGGAATTCTaGCCACTGGTCCGGGTGGTCTGCTCTGGAAAGACCTCCTCCAAG +
Preference number: 1 (lower is better)
Translates to: PEAEGVLAFGGGWEF*PLVRVVCSGKTSSK
Trigger: CTTGGAGGAGGTCTTTCCAGAGCAGACCACCCGGACCAGTGGCCAGAATTCCCACCCTCCCCCAAAAGCCAGAACTCCCTCAGCCTCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000576512.1
3UTR GCA 90 bp TGGGGCTGTGGTCAGCTCCTGTTAGAGCCTCGCTCTGTGCCAACCTaGAGGCACACTGGCCTTCTGTCTCATCCCAAACACGCCGAACCT +
Preference number: 1 (lower is better)
Translates to: WGCGQLLLEPRSVPT*RHTGLLSHPKHAEP
Trigger: AGGTTCGGCGTGTTTGGGATGAGACAGAAGGCCAGTGTGCCTGCAGGTTGGCACAGAGCGAGGCTCTAACAGGAGCTGACCACAGCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576512.1
3UTR CCA 90 bp CGAACCTGTCCCACCGCGGGCCTGTCCCTGGCTCTTTCCCCTGCCTaGTGTGTCTGGCTTCTTCTGGTGTGTCTGTCATTCTGGTTTTCT +
Preference number: 1 (lower is better)
Translates to: RTCPTAGLSLALSPA*CVWLLLVCLSFWFS
Trigger: AGAAAACCAGAATGACAGACACACCAGAAGAAGCCAGACACACCAGGCAGGGGAAAGAGCCAGGGACAGGCCCGCGGTGGGACAGGTTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576512.1
3UTR GCA 90 bp ACAAGGTCGCGCCTGCCTCGTCCCTGCCTGTGGCCGTCTCTTCTTTaGCATCACAAGCATCTGAGCACTCTGTGCGTGGATTCATTTGCT +
Preference number: 1 (lower is better)
Translates to: TRSRLPRPCLWPSLL*HHKHLSTLCVDSFA
Trigger: AGCAAATGAATCCACGCACAGAGTGCTCAGATGCTTGTGATGGCAAAGAAGAGACGGCCACAGGCAGGGACGAGGCAGGCGCGACCTTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576512.1
3UTR TCA 90 bp ACCAGAGCGTGGCATGGAGCTGGCTCCCGTTACATATTTTCGGGATaGATGAATGACTTTCTTCTGCTTGGCCTAGGAGGCTGTGGCTGC +
Preference number: 1 (lower is better)
Translates to: TRAWHGAGSRYIFSG*MNDFLLLGLGGCGC
Trigger: GCAGCCACAGCCTCCTAGGCCAAGCAGAAGAAAGTCATTCATTCATCCCGAAAATATGTAACGGGAGCCAGCTCCATGCCACGCTCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576512.1
3UTR TCA 90 bp GTGGCATGGAGCTGGCTCCCGTTACATATTTTCGGGATGAATGAATaGCTTTCTTCTGCTTGGCCTAGGAGGCTGTGGCTGCACAGACAG +
Preference number: 1 (lower is better)
Translates to: VAWSWLPLHIFGMNE*LSSAWPRRLWLHRQ
Trigger: CTGTCTGTGCAGCCACAGCCTCCTAGGCCAAGCAGAAGAAAGTCATTCATTCATCCCGAAAATATGTAACGGGAGCCAGCTCCATGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576512.1
3UTR TCA 90 bp CTCGTCCCTGCCTGTGGCCGTCTCTTCTTTGCCATCACAAGCATCTaGGCACTCTGTGCGTGGATTCATTTGCTTTTGTGTTCTCTGCTT +
Preference number: 1 (lower is better)
Translates to: LVPACGRLFFAITSI*ALCAWIHLLLCSLL
Trigger: AAGCAGAGAACACAAAAGCAAATGAATCCACGCACAGAGTGCTCAGATGCTTGTGATGGCAAAGAAGAGACGGCCACAGGCAGGGACGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576512.1
3UTR GCA 90 bp CTGTGGCCGTCTCTTCTTTGCCATCACAAGCATCTGAGCACTCTGTaGGTGGATTCATTTGCTTTTGTGTTCTCTGCTTTCTTGCACCTT +
Preference number: 1 (lower is better)
Translates to: LWPSLLCHHKHLSTL*VDSFAFVFSAFLHL
Trigger: AAGGTGCAAGAAAGCAGAGAACACAAAAGCAAATGAATCCACGCACAGAGTGCTCAGATGCTTGTGATGGCAAAGAAGAGACGGCCACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576512.1
3UTR GCA 90 bp TCTTTGCCATCACAAGCATCTGAGCACTCTGTGCGTGGATTCATTTaGTTTTGTGTTCTCTGCTTTCTTGCACCTTTAAATGACAGGTCC +
Preference number: 1 (lower is better)
Translates to: SLPSQASEHSVRGFI*FCVLCFLAPLNDRS
Trigger: GGACCTGTCATTTAAAGGTGCAAGAAAGCAGAGAACACAAAAGCAAATGAATCCACGCACAGAGTGCTCAGATGCTTGTGATGGCAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576512.1
3UTR-3UTR CCA 90 bp CGGGGCGGGCCCCTCCCAGCTGACCGAGGCCGGGTCTGCAGGTTCCAGCGCCCGGTGGCATGCAGCCTCTaGCCTGGGATAAGCTGGGGA +
Preference number: 2 (lower is better)
Translates to: RGGPLPADRGRVCRFQRPVACSL*PGISWG
Trigger: TCCCCAGCTTATCCCAGGCCAGAGGCTGCATGCCAC...CGGGCGCTGGAACCTGCAGACCCGGCCTCGGTCAGCTGGGAGGGGCCCGCCCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328313.10
3UTR-3UTR CCA 90 bp GTGGCTGCAGACGGCAGCGCCGCTTCGGGAGCGGGTTTTGCAGGAGGAGGGGGCCAGCCAAGCAGGGGTTaGCGCTGCCGGGGACAGTGG +
Preference number: 2 (lower is better)
Translates to: VAADGSAASGAGFAGGGGQPSRG*RCRGQW
Trigger: CCACTGTCCCCGGCAGCGCCAACCCCTGCTTGGCTG...GCCCCCTCCTCCTGCAAAACCCGCTCCCGAAGCGGCGCTGCCGTCTGCAGCCAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000328313.10
3UTR-3UTR CCA 90 bp GTGGCTGCAGACGGCAGCGCCGCTTCGGGAGCGGGTTTTGCAGGAGGAGGGGGCCGGGGGCTCTGGACCTaGGCTGCGAGGCTTATTACC +
Preference number: 2 (lower is better)
Translates to: VAADGSAASGAGFAGGGGRGLWT*AARLIT
Trigger: GGTAATAAGCCTCGCAGCCCAGGTCCAGAGCCCCCG...GCCCCCTCCTCCTGCAAAACCCGCTCCCGAAGCGGCGCTGCCGTCTGCAGCCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000328313.10
3UTR-3UTR GCA 90 bp GACCGGCTCGCCGGGGGCTCTGGACCTGGGCTGCGAGGCTTATTACCAGCACCAAGCAGGGGTTGGCGCTaGCGGGGACAGTGGCATGCA +
Preference number: 2 (lower is better)
Translates to: DRLAGGSGPGLRGLLPAPSRGWR*RGQWHA
Trigger: TGCATGCCACTGTCCCCGGCAGCGCCAACCCCTGCT...TGGTGCTGGTAATAAGCCTCGCAGCCCAGGTCCAGAGCCCCCGGCGAGCCGGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328313.10
3UTR-3UTR CCA 90 bp GACTGTCGCGGCTTGGCCTTTATTCCCATGGGTGCTTTGTGCCGGGGCGGGCCCTGGCCTGGGATAAGCTaGGGAGGCAGGGTCCGTCCG +
Preference number: 2 (lower is better)
Translates to: DCRGLAFIPMGALCRGGPWPGIS*GGRVRP
Trigger: CGGACGGACCCTGCCTCCCCAGCTTATCCCAGGCCA...GGGCCCGCCCCGGCACAAAGCACCCATGGGAATAAAGGCCAAGCCGCGACAGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328313.10
3UTR-3UTR CCA 90 bp GGCTCCCCGCTGTGCATCCCACAACCTCCTGCCTTGGGGCTGTGGTCAGCTCCTGCTGGGACATCAGGGTaGAGGGTCAGGGAGCGTGGG +
Preference number: 2 (lower is better)
Translates to: GSPLCIPQPPALGLWSAPAGTSG*RVRERG
Trigger: CCCACGCTCCCTGACCCTCCACCCTGATGTCCCAGC...AGGAGCTGACCACAGCCCCAAGGCAGGAGGTTGTGGGATGCACAGCGGGGAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576512.1
3UTR-3UTR CCA 90 bp GGCTCCCCGCTGTGCATCCCACAACCTCCTGCCTTGGGGCTGTGGTCAGCTCCTGCCCAGACCAGAGCGTaGCATGGAGCTGGCTCCCGT +
Preference number: 2 (lower is better)
Translates to: GSPLCIPQPPALGLWSAPAQTRA*HGAGSR
Trigger: ACGGGAGCCAGCTCCATGCCACGCTCTGGTCTGGGC...AGGAGCTGACCACAGCCCCAAGGCAGGAGGTTGTGGGATGCACAGCGGGGAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576512.1
3UTR-3UTR TCA 90 bp CTGGCCTTCTGTCTCATCCCAAACACGCCGAACCTGTCCCACCGCGGGCCTGTCTCGGGATCTCAGGGGTaGTGGCCTCTCTGGGGCAGC +
Preference number: 2 (lower is better)
Translates to: LAFCLIPNTPNLSHRGPVSGSQG*WPLWGS
Trigger: GCTGCCCCAGAGAGGCCATCACCCCTGAGATCCCGA...GACAGGCCCGCGGTGGGACAGGTTCGGCGTGTTTGGGATGAGACAGAAGGCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576512.1
3UTR-3UTR CCA 90 bp GACCGGCTCGCCGGGGGCTCTGGACCTGGGCTGCGAGGCTTATTACCAGCACCAATGCAGCCTCTGGCCTaGGATAAGCTGGGGAGGCAG +
Preference number: 2 (lower is better)
Translates to: DRLAGGSGPGLRGLLPAPMQPLA*DKLGRQ
Trigger: CTGCCTCCCCAGCTTATCCCAGGCCAGAGGCTGCAT...TGGTGCTGGTAATAAGCCTCGCAGCCCAGGTCCAGAGCCCCCGGCGAGCCGGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328313.10
3UTR-3UTR CCA 90 bp CACACTGGCCTTCTGTCTCATCCCAAACACGCCGAACCTGTCCCACCGCGGGCCTGGGAGTCACCTGCTTaGCGGGGCCTGGCAGCTCTG +
Preference number: 2 (lower is better)
Translates to: HTGLLSHPKHAEPVPPRAWESPA*RGLAAL
Trigger: CAGAGCTGCCAGGCCCCGCCAAGCAGGTGACTCCCA...GGCCCGCGGTGGGACAGGTTCGGCGTGTTTGGGATGAGACAGAAGGCCAGTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576512.1
3UTR-3UTR GCA 90 bp CTGGCCTTCTGTCTCATCCCAAACACGCCGAACCTGTCCCACCGCGGGCCTGTCCGCCTGCCTCGTCCCTaGCTGTGGCCGTCTCTTCTT +
Preference number: 2 (lower is better)
Translates to: LAFCLIPNTPNLSHRGPVRLPRP*LWPSLL
Trigger: AAGAAGAGACGGCCACAGGCAGGGACGAGGCAGGCG...GACAGGCCCGCGGTGGGACAGGTTCGGCGTGTTTGGGATGAGACAGAAGGCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576512.1
3UTR-3UTR CCA 90 bp GGTCCGGGTGGTCTGCTCTGGAAAGACCTCCTCCAAGCCCAGAGCAGAGAGGCTGGGCAGCCAGGTCAGTaGGAGTCACCTGCTTGGCGG +
Preference number: 2 (lower is better)
Translates to: GPGGLLWKDLLQAQSREAGQPGQ*ESPAWR
Trigger: CCGCCAAGCAGGTGACTCCCACTGACCTGGCTGCCC...AGCCTCTCTGCTCTGGGCTTGGAGGAGGTCTTTCCAGAGCAGACCACCCGGACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576512.1
3UTR-3UTR CCA 90 bp CTCTGGACCTGGGCTGCGAGGCTTATTACCAGCACCATAACAGCCAAGCAGGGGCGCTGCCGGGGACAGTaGCATGCAGCCTCTGGCCTG +
Preference number: 2 (lower is better)
Translates to: LWTWAARLITSTITAKQGRCRGQ*HAASGL
Trigger: CAGGCCAGAGGCTGCATGCCACTGTCCCCGGCAGCG...CCCCTGCTTGGCTGTTATGGTGCTGGTAATAAGCCTCGCAGCCCAGGTCCAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328313.10
3UTR-3UTR CCA 90 bp TGTCCCTGGCTCTTTCCCCTGCCTGGTGTGTCTGGCTTCTTCTGGTGTGTCTGTGAGGGTCAGGGAGCGTaGGGCCACCCTCCCGCCTCT +
Preference number: 2 (lower is better)
Translates to: CPWLFPLPGVSGFFWCVCEGQGA*GHPPAS
Trigger: AGAGGCGGGAGGGTGGCCCCACGCTCCCTGACCCTC...ACAGACACACCAGAAGAAGCCAGACACACCAGGCAGGGGAAAGAGCCAGGGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576512.1
3UTR-3UTR CCA 90 bp GGCTCCCCGCTGTGCATCCCACAACCTCCTGCCTTGGGGCTGTGGTCAGCTCCTGCTTTTGGGGGAGGGTaGGAATTCTGGCCACTGGTC +
Preference number: 2 (lower is better)
Translates to: GSPLCIPQPPALGLWSAPAFGGG*EFWPLV
Trigger: GACCAGTGGCCAGAATTCCCACCCTCCCCCAAAAGC...AGGAGCTGACCACAGCCCCAAGGCAGGAGGTTGTGGGATGCACAGCGGGGAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000576512.1
3UTR CAA 90 bp TGGGCTGCGAGGCTTATTACCAGCACCATAACAGCCAAGCAGGGGTaGGCGCTGCCGGGGACAGTGGCATGCAGCCTCTGGCCTGGGATA +
Preference number: 2 (lower is better)
Translates to: WAARLITSTITAKQG*ALPGTVACSLWPGI
Trigger: TATCCCAGGCCAGAGGCTGCATGCCACTGTCCCCGGCAGCGCCAACCCCTGCTTGGCTGTTATGGTGCTGGTAATAAGCCTCGCAGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328313.10
3UTR-3UTR TCA 90 bp CCTTGGGGCTGTGGTCAGCTCCTGTTAGAGCCTCGCTCTGTGCCAACCTGCAGGGCTCTGGCCAGAGGCTaGGGGAGTTCTGGCTTTTGG +
Preference number: 2 (lower is better)
Translates to: PWGCGQLLLEPRSVPTCRALARG*GSSGFW
Trigger: CCAAAAGCCAGAACTCCCTCAGCCTCTGGCCAGAGC...CCTGCAGGTTGGCACAGAGCGAGGCTCTAACAGGAGCTGACCACAGCCCCAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000576512.1
3UTR-3UTR GCA 90 bp ACACTGGCCTTCTGTCTCATCCCAAACACGCCGAACCTGTCCCACCGCGGGCCTCTGGTCCGGGTGGTCTaGTCTGGAAAGACCTCCTCC +
Preference number: 2 (lower is better)
Translates to: TLAFCLIPNTPNLSHRGPLVRVV*SGKTSS
Trigger: GGAGGAGGTCTTTCCAGAGCAGACCACCCGGACCAG...AGGCCCGCGGTGGGACAGGTTCGGCGTGTTTGGGATGAGACAGAAGGCCAGTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576512.1
3UTR-3UTR GCA 90 bp CTCTGGACCTGGGCTGCGAGGCTTATTACCAGCACCATAACAGCCAAGCAGGGGCCGGGGACAGTGGCATaGAGCCTCTGGCCTGGGATA +
Preference number: 2 (lower is better)
Translates to: LWTWAARLITSTITAKQGPGTVA*SLWPGI
Trigger: TATCCCAGGCCAGAGGCTGCATGCCACTGTCCCCGG...CCCCTGCTTGGCTGTTATGGTGCTGGTAATAAGCCTCGCAGCCCAGGTCCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328313.10
3UTR-3UTR CCA 90 bp CCTCGCTCTGTGCCAACCTGCAGGCACACTGGCCTTCTGTCTCATCCCAAACACCTGCTTGGCGGGGCCTaGCAGCTCTGTTCTGGTTGC +
Preference number: 2 (lower is better)
Translates to: PRSVPTCRHTGLLSHPKHLLGGA*QLCSGC
Trigger: GCAACCAGAACAGAGCTGCCAGGCCCCGCCAAGCAG...GTGTTTGGGATGAGACAGAAGGCCAGTGTGCCTGCAGGTTGGCACAGAGCGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576512.1
3UTR-3UTR GCA 90 bp TGCTCCCGTTTCTGTCCCCGGCCCAGCAGTGGGAGCCACTCATTTAATCATCAATCAGTGGGAGTCACCTaGTTGGCGGGGCCTGGCAGC +
Preference number: 2 (lower is better)
Translates to: CSRFCPRPSSGSHSFNHQSVGVT*LAGPGS
Trigger: GCTGCCAGGCCCCGCCAAGCAGGTGACTCCCACTGA...TTGATGATTAAATGAGTGGCTCCCACTGCTGGGCCGGGGACAGAAACGGGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576512.1
3UTR-3UTR CCA 90 bp CTCCTCCCAAATGCACCGCAGGTGACGGTTTCCGAGCTATCCCAGTGGAGCACACCCGCCTCTGCCTTCTaGGTCTCTGACCTTGAGCCA +
Preference number: 2 (lower is better)
Translates to: LLPNAPQVTVSELSQWSTPASAF*VSDLEP
Trigger: TGGCTCAAGGTCAGAGACCCAGAAGGCAGAGGCGGG...TGTGCTCCACTGGGATAGCTCGGAAACCGTCACCTGCGGTGCATTTGGGAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576512.1
3UTR-3UTR CCA 90 bp TGGACTGTCTTGTTCGCTGCATATCCTGAGCCCAGACCAGAGCGTGGCATGGAGGGAGGGTGGGAATTCTaGCCACTGGTCCGGGTGGTC +
Preference number: 2 (lower is better)
Translates to: WTVLFAAYPEPRPERGMEGGWEF*PLVRVV
Trigger: GACCACCCGGACCAGTGGCCAGAATTCCCACCCTCC...CTCCATGCCACGCTCTGGTCTGGGCTCAGGATATGCAGCGAACAAGACAGTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576512.1
3UTR-3UTR CCA 90 bp TGTCCCTGGCTCTTTCCCCTGCCTGGTGTGTCTGGCTTCTTCTGGTGTGTCTGTCCAGAGCAGAGAGGCTaGAAGGGTCAGCCTCGGGAT +
Preference number: 2 (lower is better)
Translates to: CPWLFPLPGVSGFFWCVCPEQRG*KGQPRD
Trigger: ATCCCGAGGCTGACCCTTCCAGCCTCTCTGCTCTGG...ACAGACACACCAGAAGAAGCCAGACACACCAGGCAGGGGAAAGAGCCAGGGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576512.1
3UTR-3UTR CCA 90 bp TGTCCCTGGCTCTTTCCCCTGCCTGGTGTGTCTGGCTTCTTCTGGTGTGTCTGTGGCCACTGGTCCGGGTaGTCTGCTCTGGAAAGACCT +
Preference number: 2 (lower is better)
Translates to: CPWLFPLPGVSGFFWCVCGHWSG*SALERP
Trigger: AGGTCTTTCCAGAGCAGACCACCCGGACCAGTGGCC...ACAGACACACCAGAAGAAGCCAGACACACCAGGCAGGGGAAAGAGCCAGGGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576512.1
3UTR-3UTR CCA 90 bp TGTCCCTGGCTCTTTCCCCTGCCTGGTGTGTCTGGCTTCTTCTGGTGTGTCTGTAGGCTGAGGGAGTTCTaGCTTTTGGGGGAGGGTGGG +
Preference number: 2 (lower is better)
Translates to: CPWLFPLPGVSGFFWCVCRLREF*LLGEGG
Trigger: CCCACCCTCCCCCAAAAGCCAGAACTCCCTCAGCCT...ACAGACACACCAGAAGAAGCCAGACACACCAGGCAGGGGAAAGAGCCAGGGACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000576512.1
3UTR CAA 90 bp GACAAGGTCGCGCCTGCCTCGTCCCTGCCTGTGGCCGTCTCTTCTTaGCCATCACAAGCATCTGAGCACTCTGTGCGTGGATTCATTTGC +
Preference number: 2 (lower is better)
Translates to: DKVAPASSLPVAVSS*PSQASEHSVRGFIC
Trigger: GCAAATGAATCCACGCACAGAGTGCTCAGATGCTTGTGATGGCAAAGAAGAGACGGCCACAGGCAGGGACGAGGCAGGCGCGACCTTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576512.1
3UTR-3UTR CCA 90 bp TGTCCCTGGCTCTTTCCCCTGCCTGGTGTGTCTGGCTTCTTCTGGTGTGTCTGTTGGCCTAGGAGGCTGTaGCTGCACAGACAGACAAGG +
Preference number: 2 (lower is better)
Translates to: CPWLFPLPGVSGFFWCVCWPRRL*LHRQTR
Trigger: CCTTGTCTGTCTGTGCAGCCACAGCCTCCTAGGCCA...ACAGACACACCAGAAGAAGCCAGACACACCAGGCAGGGGAAAGAGCCAGGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576512.1
3UTR-3UTR GCA 90 bp GGGAGCCACTCATTTAATCATCAACCTCAGACCCTGTGTAACCTCAGCTTGGGGCCTGGCTCTTTCCCCTaGCTGGTGTGTCTGGCTTCT +
Preference number: 2 (lower is better)
Translates to: GSHSFNHQPQTLCNLSLGPGSFP*LVCLAS
Trigger: AGAAGCCAGACACACCAGGCAGGGGAAAGAGCCAGG...CCCCAAGCTGAGGTTACACAGGGTCTGAGGTTGATGATTAAATGAGTGGCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576512.1
3UTR-3UTR CCA 90 bp AGGTATTTGGAATCTGTGCACATTGCAGCTTCTCCACCCCGCCACTGGAATGTCCAGCCACCTCCAAACTaGCCACTTCCTGCTCCCGTT +
Preference number: 2 (lower is better)
Translates to: RYLESVHIAASPPRHWNVQPPPN*PLPAPV
Trigger: AACGGGAGCAGGAAGTGGCCAGTTTGGAGGTGGCTG...GACATTCCAGTGGCGGGGTGGAGAAGCTGCAATGTGCACAGATTCCAAATACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576512.1
3UTR-3UTR TCA 90 bp TGGACTGTCTTGTTCGCTGCATATCCTGAGCCCAGACCAGAGCGTGGCATGGAGTTCGGGATGAATGAATaGCTTTCTTCTGCTTGGCCT +
Preference number: 2 (lower is better)
Translates to: WTVLFAAYPEPRPERGMEFGMNE*LSSAWP
Trigger: AGGCCAAGCAGAAGAAAGTCATTCATTCATCCCGAA...CTCCATGCCACGCTCTGGTCTGGGCTCAGGATATGCAGCGAACAAGACAGTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576512.1
3UTR-3UTR CCA 90 bp TGCTCCCGTTTCTGTCCCCGGCCCAGCAGTGGGAGCCACTCATTTAATCATCAAGTGTCTGGCTTCTTCTaGTGTGTCTGTCATTCTGGT +
Preference number: 2 (lower is better)
Translates to: CSRFCPRPSSGSHSFNHQVSGFF*CVCHSG
Trigger: ACCAGAATGACAGACACACCAGAAGAAGCCAGACAC...TTGATGATTAAATGAGTGGCTCCCACTGCTGGGCCGGGGACAGAAACGGGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576512.1
3UTR-3UTR TCA 90 bp TCCCGTTTCTGTCCCCGGCCCAGCAGTGGGAGCCACTCATTTAATCATCAACCTTCTTGCACCTTTAAATaGCAGGTCCTGGACTGTCTT +
Preference number: 2 (lower is better)
Translates to: SRFCPRPSSGSHSFNHQPSCTFK*QVLDCL
Trigger: AAGACAGTCCAGGACCTGTCATTTAAAGGTGCAAGA...AGGTTGATGATTAAATGAGTGGCTCCCACTGCTGGGCCGGGGACAGAAACGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576512.1
3UTR-3UTR GCA 90 bp GGGAGCCACTCATTTAATCATCAACCTCAGACCCTGTGTAACCTCAGCTTGGGGTGGCCGTCTCTTCTTTaGCATCACAAGCATCTGAGC +
Preference number: 2 (lower is better)
Translates to: GSHSFNHQPQTLCNLSLGWPSLL*HHKHLS
Trigger: GCTCAGATGCTTGTGATGGCAAAGAAGAGACGGCCA...CCCCAAGCTGAGGTTACACAGGGTCTGAGGTTGATGATTAAATGAGTGGCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576512.1
3UTR-3UTR TCA 90 bp TGTCCCTGGCTCTTTCCCCTGCCTGGTGTGTCTGGCTTCTTCTGGTGTGTCTGTTATTTTCGGGATGAATaGATGACTTTCTTCTGCTTG +
Preference number: 2 (lower is better)
Translates to: CPWLFPLPGVSGFFWCVCYFRDE*MTFFCL
Trigger: CAAGCAGAAGAAAGTCATTCATTCATCCCGAAAATA...ACAGACACACCAGAAGAAGCCAGACACACCAGGCAGGGGAAAGAGCCAGGGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576512.1
3UTR-3UTR CCA 90 bp TTTCATTTTTGCATTTTCTTCACCCTCCCACATAATCTGTCCACAAACCTCGAAGGGAATTCTGGCCACTaGTCCGGGTGGTCTGCTCTG +
Preference number: 2 (lower is better)
Translates to: FHFCIFFTLPHNLSTNLEGNSGH*SGWSAL
Trigger: CAGAGCAGACCACCCGGACCAGTGGCCAGAATTCCC...TTCGAGGTTTGTGGACAGATTATGTGGGAGGGTGAAGAAAATGCAAAAATGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000576512.1
3UTR-3UTR GCA 90 bp TTTCATTTTTGCATTTTCTTCACCCTCCCACATAATCTGTCCACAAACCTCGAAAGCTCTCCTCCCAAATaGACCGCAGGTGACGGTTTC +
Preference number: 2 (lower is better)
Translates to: FHFCIFFTLPHNLSTNLESSPPK*TAGDGF
Trigger: GAAACCGTCACCTGCGGTGCATTTGGGAGGAGAGCT...TTCGAGGTTTGTGGACAGATTATGTGGGAGGGTGAAGAAAATGCAAAAATGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000576512.1
3UTR GCA 72 bp CAGCGCCCGCAGAGCTCCCGCGCGCCCCCGCGTGGCTaGAGACGGCAGCGCCGCTTCGGGAGCGGGTTTTGC +
Preference number: 3 (lower is better)
Translates to: QRPQSSRAPPRG*RRQRRFGSGFC
Trigger: GCAAAACCCGCTCCCGAAGCGGCGCTGCCGTCTGCAGCCACGCGGGGGCGCGCGGGAGCTCTGCGGGCGCTG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328313.10
3UTR CCA 72 bp GTTCCAGCGCCCGCAGAGCTCCCGCGCGCCCCCGCGTaGCTGCAGACGGCAGCGCCGCTTCGGGAGCGGGTT +
Preference number: 3 (lower is better)
Translates to: VPAPAELPRAPA*LQTAAPLRERV
Trigger: AACCCGCTCCCGAAGCGGCGCTGCCGTCTGCAGCCACGCGGGGGCGCGCGGGAGCTCTGCGGGCGCTGGAAC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328313.10
3UTR GCA 72 bp AGCAGAGCATCGCAGCGAGACAGCCGGCCCAGGGCCTaGGGGCAGCTCCCGGCGGCTTCCTTGAGCCATGGG +
Preference number: 3 (lower is better)
Translates to: SRASQRDSRPRA*GQLPAASLSHG
Trigger: CCCATGGCTCAAGGAAGCCGCCGGGAGCTGCCCGCAGGCCCTGGGCCGGCTGTCTCGCTGCGATGCTCTGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328313.10
3UTR CCA 72 bp GGCGCTGCCGGGGACAGTGGCATGCAGCCTCTGGCCTaGGATAAGCTGGGGAGGCAGGGTCCGTCCGCGACC +
Preference number: 3 (lower is better)
Translates to: GAAGDSGMQPLA*DKLGRQGPSAT
Trigger: GGTCGCGGACGGACCCTGCCTCCCCAGCTTATCCCAGGCCAGAGGCTGCATGCCACTGTCCCCGGCAGCGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328313.10
3UTR GCA 72 bp TGTCGCGGCTTGGCCTTTATTCCCATGGGTGCTTTGTaGCGGGGCGGGCCCCTCCCAGCTGACCGAGGCCGG +
Preference number: 3 (lower is better)
Translates to: CRGLAFIPMGAL*RGGPLPADRGR
Trigger: CCGGCCTCGGTCAGCTGGGAGGGGCCCGCCCCGGCACAAAGCACCCATGGGAATAAAGGCCAAGCCGCGACA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328313.10
3UTR-3UTR CAA 90 bp CTGTCGCGGCTTGGCCTTTATTCCCATGGGTGCTTTGTGCCGGGGCGGGCCCCTACAGCCAAGCAGGGGTaGGCGCTGCCGGGGACAGTG +
Preference number: 3 (lower is better)
Translates to: LSRLGLYSHGCFVPGRAPTAKQG*ALPGTV
Trigger: CACTGTCCCCGGCAGCGCCAACCCCTGCTTGGCTGT...AGGGGCCCGCCCCGGCACAAAGCACCCATGGGAATAAAGGCCAAGCCGCGACAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000328313.10
3UTR GCA 72 bp CTGGGTCCTGCAGCCACCTCCAAACTGGCCACTTCCTaGTCCCGTTTCTGTCCCCGGCCCAGCAGTGGGAGC +
Preference number: 3 (lower is better)
Translates to: LGPAATSKLATS*SRFCPRPSSGS
Trigger: GCTCCCACTGCTGGGCCGGGGACAGAAACGGGAGCAGGAAGTGGCCAGTTTGGAGGTGGCTGCAGGACCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576512.1
3UTR CCA 72 bp AGGGGGCCGGTTATGGGACCGGCTCGCCGGGGGCTCTaGACCTGGGCTGCGAGGCTTATTACCAGCACCATA +
Preference number: 3 (lower is better)
Translates to: RGPVMGPARRGL*TWAARLITSTI
Trigger: TATGGTGCTGGTAATAAGCCTCGCAGCCCAGGTCCAGAGCCCCCGGCGAGCCGGTCCCATAACCGGCCCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000328313.10
3UTR TCA 72 bp CCACCTTCTCAGAGAGGCCATTCCAGGCCGGGCAAATaGCAAGGTCGCGCCTGCCTCGTCCCTGCCTGTGGC +
Preference number: 3 (lower is better)
Translates to: PPSQRGHSRPGK*QGRACLVPACG
Trigger: GCCACAGGCAGGGACGAGGCAGGCGCGACCTTGTCATTTGCCCGGCCTGGAATGGCCTCTCTGAGAAGGTGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576512.1
3UTR CCA 72 bp CCGGTTATGGGACCGGCTCGCCGGGGGCTCTGGACCTaGGCTGCGAGGCTTATTACCAGCACCATAACAGCC +
Preference number: 3 (lower is better)
Translates to: PVMGPARRGLWT*AARLITSTITA
Trigger: GGCTGTTATGGTGCTGGTAATAAGCCTCGCAGCCCAGGTCCAGAGCCCCCGGCGAGCCGGTCCCATAACCGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328313.10
3UTR CCA 72 bp GGGGCTCCCCGCTGTGCATCCCACAACCTCCTGCCTTaGGGCTGTGGTCAGCTCCTGTTAGAGCCTCGCTCT +
Preference number: 3 (lower is better)
Translates to: GAPRCASHNLLP*GCGQLLLEPRS
Trigger: AGAGCGAGGCTCTAACAGGAGCTGACCACAGCCCCAAGGCAGGAGGTTGTGGGATGCACAGCGGGGAGCCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576512.1
3UTR GCA 72 bp CTGTCCCACCGCGGGCCTGTCCCTGGCTCTTTCCCCTaGCTGGTGTGTCTGGCTTCTTCTGGTGTGTCTGTC +
Preference number: 3 (lower is better)
Translates to: LSHRGPVPGSFP*LVCLASSGVSV
Trigger: GACAGACACACCAGAAGAAGCCAGACACACCAGGCAGGGGAAAGAGCCAGGGACAGGCCCGCGGTGGGACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576512.1
3UTR GCA 72 bp TATGGGACCGGCTCGCCGGGGGCTCTGGACCTGGGCTaGGAGGCTTATTACCAGCACCATAACAGCCAAGCA +
Preference number: 3 (lower is better)
Translates to: YGTGSPGALDLG*EAYYQHHNSQA
Trigger: TGCTTGGCTGTTATGGTGCTGGTAATAAGCCTCGCAGCCCAGGTCCAGAGCCCCCGGCGAGCCGGTCCCATA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328313.10
3UTR GCA 72 bp GGAGGGTGGGAATTCTGGCCACTGGTCCGGGTGGTCTaGTCTGGAAAGACCTCCTCCAAGCCCAGAGCAGAG +
Preference number: 3 (lower is better)
Translates to: GGWEFWPLVRVV*SGKTSSKPRAE
Trigger: CTCTGCTCTGGGCTTGGAGGAGGTCTTTCCAGAGCAGACCACCCGGACCAGTGGCCAGAATTCCCACCCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576512.1
3UTR CCA 72 bp CCAGAGGCTGAGGGAGTTCTGGCTTTTGGGGGAGGGTaGGAATTCTGGCCACTGGTCCGGGTGGTCTGCTCT +
Preference number: 3 (lower is better)
Translates to: PEAEGVLAFGGG*EFWPLVRVVCS
Trigger: AGAGCAGACCACCCGGACCAGTGGCCAGAATTCCCACCCTCCCCCAAAAGCCAGAACTCCCTCAGCCTCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000576512.1
3UTR CCA 72 bp CCGCTGTGCATCCCACAACCTCCTGCCTTGGGGCTGTaGTCAGCTCCTGTTAGAGCCTCGCTCTGTGCCAAC +
Preference number: 3 (lower is better)
Translates to: PLCIPQPPALGL*SAPVRASLCAN
Trigger: GTTGGCACAGAGCGAGGCTCTAACAGGAGCTGACCACAGCCCCAAGGCAGGAGGTTGTGGGATGCACAGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576512.1
3UTR CCA 72 bp TTGCAGCTTCTCCACCCCGCCACTGGAATGTCCGGCTaGGTCCTGCAGCCACCTCCAAACTGGCCACTTCCT +
Preference number: 3 (lower is better)
Translates to: LQLLHPATGMSG*VLQPPPNWPLP
Trigger: AGGAAGTGGCCAGTTTGGAGGTGGCTGCAGGACCCAGCCGGACATTCCAGTGGCGGGGTGGAGAAGCTGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576512.1
3UTR CCA 72 bp GTGGGAATTCTGGCCACTGGTCCGGGTGGTCTGCTCTaGAAAGACCTCCTCCAAGCCCAGAGCAGAGAGGCT +
Preference number: 3 (lower is better)
Translates to: VGILATGPGGLL*KDLLQAQSREA
Trigger: AGCCTCTCTGCTCTGGGCTTGGAGGAGGTCTTTCCAGAGCAGACCACCCGGACCAGTGGCCAGAATTCCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576512.1
3UTR-3UTR CAA 90 bp CTGGCCTTCTGTCTCATCCCAAACACGCCGAACCTGTCCCACCGCGGGCCTGTCAGGTCCTGGACTGTCTaGTTCGCTGCATATCCTGAG +
Preference number: 3 (lower is better)
Translates to: LAFCLIPNTPNLSHRGPVRSWTV*FAAYPE
Trigger: CTCAGGATATGCAGCGAACAAGACAGTCCAGGACCT...GACAGGCCCGCGGTGGGACAGGTTCGGCGTGTTTGGGATGAGACAGAAGGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576512.1
3UTR GCA 72 bp CGCCTGCCTCGTCCCTGCCTGTGGCCGTCTCTTCTTTaGCATCACAAGCATCTGAGCACTCTGTGCGTGGAT +
Preference number: 3 (lower is better)
Translates to: RLPRPCLWPSLL*HHKHLSTLCVD
Trigger: ATCCACGCACAGAGTGCTCAGATGCTTGTGATGGCAAAGAAGAGACGGCCACAGGCAGGGACGAGGCAGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576512.1
3UTR CCA 72 bp GAATCTGTGCACATTGCAGCTTCTCCACCCCGCCACTaGAATGTCCGGCTGGGTCCTGCAGCCACCTCCAAA +
Preference number: 3 (lower is better)
Translates to: ESVHIAASPPRH*NVRLGPAATSK
Trigger: TTTGGAGGTGGCTGCAGGACCCAGCCGGACATTCCAGTGGCGGGGTGGAGAAGCTGCAATGTGCACAGATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576512.1
3UTR GCA 72 bp GGTCAGCTCCTGTTAGAGCCTCGCTCTGTGCCAACCTaGAGGCACACTGGCCTTCTGTCTCATCCCAAACAC +
Preference number: 3 (lower is better)
Translates to: GQLLLEPRSVPT*RHTGLLSHPKH
Trigger: GTGTTTGGGATGAGACAGAAGGCCAGTGTGCCTGCAGGTTGGCACAGAGCGAGGCTCTAACAGGAGCTGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576512.1
3UTR CCA 72 bp TTAATCATCAACCTCAGACCCTGTGTAACCTCAGCTTaGGGCTCCCCGCTGTGCATCCCACAACCTCCTGCC +
Preference number: 3 (lower is better)
Translates to: LIINLRPCVTSA*GSPLCIPQPPA
Trigger: GGCAGGAGGTTGTGGGATGCACAGCGGGGAGCCCCAAGCTGAGGTTACACAGGGTCTGAGGTTGATGATTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576512.1
3UTR-3UTR CAA 90 bp AGGTATTTGGAATCTGTGCACATTGCAGCTTCTCCACCCCGCCACTGGAATGTCGCAGCTCTGTTCTGGTaGCCTAGGACTGTAGCTGGG +
Preference number: 3 (lower is better)
Translates to: RYLESVHIAASPPRHWNVAALFW*PRTVAG
Trigger: CCCAGCTACAGTCCTAGGCAACCAGAACAGAGCTGC...GACATTCCAGTGGCGGGGTGGAGAAGCTGCAATGTGCACAGATTCCAAATACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576512.1
3UTR-3UTR CAA 90 bp ACACTGGCCTTCTGTCTCATCCCAAACACGCCGAACCTGTCCCACCGCGGGCCTTGTGCGTGGATTCATTaGCTTTTGTGTTCTCTGCTT +
Preference number: 3 (lower is better)
Translates to: TLAFCLIPNTPNLSHRGPCAWIH*LLCSLL
Trigger: AAGCAGAGAACACAAAAGCAAATGAATCCACGCACA...AGGCCCGCGGTGGGACAGGTTCGGCGTGTTTGGGATGAGACAGAAGGCCAGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576512.1
3UTR CCA 72 bp TCGCTGCATATCCTGAGCCCAGACCAGAGCGTGGCATaGAGCTGGCTCCCGTTACATATTTTCGGGATGAAT +
Preference number: 3 (lower is better)
Translates to: SLHILSPDQSVA*SWLPLHIFGMN
Trigger: ATTCATCCCGAAAATATGTAACGGGAGCCAGCTCCATGCCACGCTCTGGTCTGGGCTCAGGATATGCAGCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576512.1
3UTR-3UTR CAA 90 bp AGGTATTTGGAATCTGTGCACATTGCAGCTTCTCCACCCCGCCACTGGAATGTCGTGGCCGTCTCTTCTTaGCCATCACAAGCATCTGAG +
Preference number: 3 (lower is better)
Translates to: RYLESVHIAASPPRHWNVVAVSS*PSQASE
Trigger: CTCAGATGCTTGTGATGGCAAAGAAGAGACGGCCAC...GACATTCCAGTGGCGGGGTGGAGAAGCTGCAATGTGCACAGATTCCAAATACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576512.1
3UTR CCA 72 bp CCACAAACCTCGAATGTCGTGCCTCTTAAAGGTATTTaGAATCTGTGCACATTGCAGCTTCTCCACCCCGCC +
Preference number: 3 (lower is better)
Translates to: PQTSNVVPLKGI*NLCTLQLLHPA
Trigger: GGCGGGGTGGAGAAGCTGCAATGTGCACAGATTCCAAATACCTTTAAGAGGCACGACATTCGAGGTTTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576512.1
3UTR TCA 72 bp TGGCATGGAGCTGGCTCCCGTTACATATTTTCGGGATaGATGAATGACTTTCTTCTGCTTGGCCTAGGAGGC +
Preference number: 3 (lower is better)
Translates to: WHGAGSRYIFSG*MNDFLLLGLGG
Trigger: GCCTCCTAGGCCAAGCAGAAGAAAGTCATTCATTCATCCCGAAAATATGTAACGGGAGCCAGCTCCATGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576512.1
3UTR TCA 72 bp GCCTGTGGCCGTCTCTTCTTTGCCATCACAAGCATCTaGGCACTCTGTGCGTGGATTCATTTGCTTTTGTGT +
Preference number: 3 (lower is better)
Translates to: ACGRLFFAITSI*ALCAWIHLLLC
Trigger: ACACAAAAGCAAATGAATCCACGCACAGAGTGCTCAGATGCTTGTGATGGCAAAGAAGAGACGGCCACAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576512.1
CDS-3UTR GCA 90 bp CGGGGCGGGCCCCTCCCAGCTGACCGAGGCCGGGTCTGCAGGTTCCAGCGCCCGCCAGCCCTCAGGCCCTaGCTCTGGGCTGTGATCCAG +
Preference number: 4 (lower is better)
Translates to: RGGPLPADRGRVCRFQRPPALRP*LWAVIQ
Trigger: CTGGATCACAGCCCAGAGGCAGGGCCTGAGGGCTGG...CGGGCGCTGGAACCTGCAGACCCGGCCTCGGTCAGCTGGGAGGGGCCCGCCCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328313.10
CDS-3UTR GCA 90 bp CGCAGAGCTCCCGCGCGCCCCCGCGTGGCTGCAGACGGCAGCGCCGCTTCGGGAGGTGGTTGCGCGCGATaGTCTCCCGGAGGTAGCCCA +
Preference number: 4 (lower is better)
Translates to: RRAPARPRVAADGSAASGGGCAR*SPGGSP
Trigger: TGGGCTACCTCCGGGAGAGCATCGCGCGCAACCACC...TCCCGAAGCGGCGCTGCCGTCTGCAGCCACGCGGGGGCGCGCGGGAGCTCTGCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328313.10
CDS-3UTR GCA 90 bp CGGGGCGGGCCCCTCCCAGCTGACCGAGGCCGGGTCTGCAGGTTCCAGCGCCCGAGCAGGGGTTGGCGCTaGCGGGGACAGTGGCATGCA +
Preference number: 4 (lower is better)
Translates to: RGGPLPADRGRVCRFQRPSRGWR*RGQWHA
Trigger: TGCATGCCACTGTCCCCGGCAGCGCCAACCCCTGCT...CGGGCGCTGGAACCTGCAGACCCGGCCTCGGTCAGCTGGGAGGGGCCCGCCCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000328313.10
CDS-3UTR CCA 90 bp CGCAGAGCTCCCGCGCGCCCCCGCGTGGCTGCAGACGGCAGCGCCGCTTCGGGACGTACCTGTGGCCCGTaGAGTCCGGCTCCCCGAAGT +
Preference number: 4 (lower is better)
Translates to: RRAPARPRVAADGSAASGRTCGP*SPAPRS
Trigger: ACTTCGGGGAGCCGGACTCCACGGGCCACAGGTACG...TCCCGAAGCGGCGCTGCCGTCTGCAGCCACGCGGGGGCGCGCGGGAGCTCTGCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328313.10
CDS-3UTR CCA 90 bp CCCCCGCGTGGCTGCAGACGGCAGCGCCGCTTCGGGAGCGGGTTTTGCAGGAGGTCGGGGCCGTACCTGTaGCCCGTGGAGTCCGGCTCC +
Preference number: 4 (lower is better)
Translates to: PPRGCRRQRRFGSGFCRRSGPYL*PVESGS
Trigger: GGAGCCGGACTCCACGGGCCACAGGTACGGCCCCGA...CCTCCTGCAAAACCCGCTCCCGAAGCGGCGCTGCCGTCTGCAGCCACGCGGGGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328313.10
CDS-3UTR CCA 90 bp GGGGCGGGCCCCTCCCAGCTGACCGAGGCCGGGTCTGCAGGTTCCAGCGCCCGCCTAGGTGCCCATCGTTaGCCTCGGGCACGATGCCCA +
Preference number: 4 (lower is better)
Translates to: GAGPSQLTEAGSAGSSARLGAHR*PRARCP
Trigger: TGGGCATCGTGCCCGAGGCCAACGATGGGCACCTAG...GCGGGCGCTGGAACCTGCAGACCCGGCCTCGGTCAGCTGGGAGGGGCCCGCCCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328313.10
CDS-3UTR CCA 90 bp TGTGCCGGGGCGGGCCCCTCCCAGCTGACCGAGGCCGGGTCTGCAGGTTCCAGCCAGCCAAGCAGGGGTTaGCGCTGCCGGGGACAGTGG +
Preference number: 4 (lower is better)
Translates to: CAGAGPSQLTEAGSAGSSQPSRG*RCRGQW
Trigger: CCACTGTCCCCGGCAGCGCCAACCCCTGCTTGGCTG...GCTGGAACCTGCAGACCCGGCCTCGGTCAGCTGGGAGGGGCCCGCCCCGGCACA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000328313.10
CDS-3UTR GCA 90 bp CCGCGTGGCTGCAGACGGCAGCGCCGCTTCGGGAGCGGGTTTTGCAGGAGGAGGGACCGAGGCCGGGTCTaGAGGTTCCAGCGCCCGCAG +
Preference number: 4 (lower is better)
Translates to: PRGCRRQRRFGSGFCRRRDRGRV*RFQRPQ
Trigger: CTGCGGGCGCTGGAACCTGCAGACCCGGCCTCGGTC...CCTCCTCCTGCAAAACCCGCTCCCGAAGCGGCGCTGCCGTCTGCAGCCACGCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328313.10
CDS-3UTR CCA 90 bp TGCCGGGGCGGGCCCCTCCCAGCTGACCGAGGCCGGGTCTGCAGGTTCCAGCGCTTGTCCCACCACCTCTaGATGCCCAGCGTGGCGTGG +
Preference number: 4 (lower is better)
Translates to: CRGGPLPADRGRVCRFQRLSHHL*MPSVAW
Trigger: CCACGCCACGCTGGGCATCCAGAGGTGGTGGGACAA...GCGCTGGAACCTGCAGACCCGGCCTCGGTCAGCTGGGAGGGGCCCGCCCCGGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328313.10
CDS-3UTR GCA 90 bp TGTGCCGGGGCGGGCCCCTCCCAGCTGACCGAGGCCGGGTCTGCAGGTTCCAGCTTCGGGAGCGGGTTTTaGAGGAGGAGGGGGCCCGAA +
Preference number: 4 (lower is better)
Translates to: CAGAGPSQLTEAGSAGSSFGSGF*RRRGPE
Trigger: TTCGGGCCCCCTCCTCCTGCAAAACCCGCTCCCGAA...GCTGGAACCTGCAGACCCGGCCTCGGTCAGCTGGGAGGGGCCCGCCCCGGCACA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000328313.10
CDS-3UTR CCA 90 bp GGGGCGGGCCCCTCCCAGCTGACCGAGGCCGGGTCTGCAGGTTCCAGCGCCCGCGAGCAGCATCCCGTTTaGTCCGTAGTCCAGGAGCTC +
Preference number: 4 (lower is better)
Translates to: GAGPSQLTEAGSAGSSAREQHPV*SVVQEL
Trigger: GAGCTCCTGGACTACGGACCAAACGGGATGCTGCTC...GCGGGCGCTGGAACCTGCAGACCCGGCCTCGGTCAGCTGGGAGGGGCCCGCCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328313.10
CDS-3UTR CCA 90 bp CCCCCGCGTGGCTGCAGACGGCAGCGCCGCTTCGGGAGCGGGTTTTGCAGGAGGTGGCCTGGGATAAGCTaGGGAGGCAGGGTCCGTCCG +
Preference number: 4 (lower is better)
Translates to: PPRGCRRQRRFGSGFCRRWPGIS*GGRVRP
Trigger: CGGACGGACCCTGCCTCCCCAGCTTATCCCAGGCCA...CCTCCTGCAAAACCCGCTCCCGAAGCGGCGCTGCCGTCTGCAGCCACGCGGGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328313.10
CDS-3UTR CCA 90 bp TGCCGGGGCGGGCCCCTCCCAGCTGACCGAGGCCGGGTCTGCAGGTTCCAGCGCATGCAGCCTCTGGCCTaGGATAAGCTGGGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: CRGGPLPADRGRVCRFQRMQPLA*DKLGRQ
Trigger: CTGCCTCCCCAGCTTATCCCAGGCCAGAGGCTGCAT...GCGCTGGAACCTGCAGACCCGGCCTCGGTCAGCTGGGAGGGGCCCGCCCCGGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328313.10
CDS-3UTR TCA 90 bp GGGGCGGGCCCCTCCCAGCTGACCGAGGCCGGGTCTGCAGGTTCCAGCGCCCGCCGATGTCCCGGAAGGTaGAGTTGGGGAACTTGTGGA +
Preference number: 4 (lower is better)
Translates to: GAGPSQLTEAGSAGSSARRCPGR*SWGTCG
Trigger: TCCACAAGTTCCCCAACTTCACCTTCCGGGACATCG...GCGGGCGCTGGAACCTGCAGACCCGGCCTCGGTCAGCTGGGAGGGGCCCGCCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328313.10
CDS-3UTR CCA 90 bp GGGGTTGGCGCTGCCGGGGACAGTGGCATGCAGCCTCTGGCCTGGGATAAGCTGGCTCGCCGGGGGCTCTaGACCTGGGCTGCGAGGCTT +
Preference number: 4 (lower is better)
Translates to: GVGAAGDSGMQPLAWDKLARRGL*TWAARL
Trigger: AAGCCTCGCAGCCCAGGTCCAGAGCCCCCGGCGAGC...CAGCTTATCCCAGGCCAGAGGCTGCATGCCACTGTCCCCGGCAGCGCCAACCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328313.10
CDS-3UTR TCA 90 bp CCAAGCAGGGGTTGGCGCTGCCGGGGACAGTGGCATGCAGCCTCTGGCCTGGGATCCCGGCGGCTTCCTTaGGCCATGGGGCGTTATGCG +
Preference number: 4 (lower is better)
Translates to: PSRGWRCRGQWHAASGLGSRRLP*AMGRYA
Trigger: CGCATAACGCCCCATGGCTCAAGGAAGCCGCCGGGA...TCCCAGGCCAGAGGCTGCATGCCACTGTCCCCGGCAGCGCCAACCCCTGCTTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328313.10
CDS-3UTR CCA 90 bp CCCCCGCGTGGCTGCAGACGGCAGCGCCGCTTCGGGAGCGGGTTTTGCAGGAGGTCTGGATGCCCAGCGTaGCGTGGTAGGGCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: PPRGCRRQRRFGSGFCRRSGCPA*RGRAAS
Trigger: TGAAGCTGCCCTACCACGCCACGCTGGGCATCCAGA...CCTCCTGCAAAACCCGCTCCCGAAGCGGCGCTGCCGTCTGCAGCCACGCGGGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328313.10
CDS-3UTR CCA 90 bp CCGCGTGGCTGCAGACGGCAGCGCCGCTTCGGGAGCGGGTTTTGCAGGAGGAGGCTCAGGCCCTGCCTCTaGGCTGTGATCCAGATGGGC +
Preference number: 4 (lower is better)
Translates to: PRGCRRQRRFGSGFCRRRLRPCL*AVIQMG
Trigger: GCCCATCTGGATCACAGCCCAGAGGCAGGGCCTGAG...CCTCCTCCTGCAAAACCCGCTCCCGAAGCGGCGCTGCCGTCTGCAGCCACGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328313.10
CDS-3UTR CCA 90 bp TGGGACCGGCTCGCCGGGGGCTCTGGACCTGGGCTGCGAGGCTTATTACCAGCACGCTGCCGGGGACAGTaGCATGCAGCCTCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: WDRLAGGSGPGLRGLLPARCRGQ*HAASGL
Trigger: CAGGCCAGAGGCTGCATGCCACTGTCCCCGGCAGCG...TGCTGGTAATAAGCCTCGCAGCCCAGGTCCAGAGCCCCCGGCGAGCCGGTCCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328313.10
CDS-3UTR GCA 90 bp CGGGGCGGGCCCCTCCCAGCTGACCGAGGCCGGGTCTGCAGGTTCCAGCGCCCGAGCCATGGGGCGTTATaGGACCTCAGACAGAAGAAT +
Preference number: 4 (lower is better)
Translates to: RGGPLPADRGRVCRFQRPSHGAL*DLRQKN
Trigger: ATTCTTCTGTCTGAGGTCGCATAACGCCCCATGGCT...CGGGCGCTGGAACCTGCAGACCCGGCCTCGGTCAGCTGGGAGGGGCCCGCCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328313.10
CDS-3UTR GCA 90 bp CCAAGCAGGGGTTGGCGCTGCCGGGGACAGTGGCATGCAGCCTCTGGCCTGGGACCGGGGACAGTGGCATaGAGCCTCTGGCCTGGGATA +
Preference number: 4 (lower is better)
Translates to: PSRGWRCRGQWHAASGLGPGTVA*SLWPGI
Trigger: TATCCCAGGCCAGAGGCTGCATGCCACTGTCCCCGG...TCCCAGGCCAGAGGCTGCATGCCACTGTCCCCGGCAGCGCCAACCCCTGCTTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328313.10
3UTR CAA 72 bp GACTGTCGCGGCTTGGCCTTTATTCCCATGGGTGCTTaGTGCCGGGGCGGGCCCCTCCCAGCTGACCGAGGC +
Preference number: 4 (lower is better)
Translates to: DCRGLAFIPMGA*CRGGPLPADRG
Trigger: GCCTCGGTCAGCTGGGAGGGGCCCGCCCCGGCACAAAGCACCCATGGGAATAAAGGCCAAGCCGCGACAGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328313.10
CDS-3UTR TCA 90 bp GGTTATGGGACCGGCTCGCCGGGGGCTCTGGACCTGGGCTGCGAGGCTTATTACCCTGCCTCTGGGCTGTaGTCCAGATGGGCACGCTGC +
Preference number: 4 (lower is better)
Translates to: GYGTGSPGALDLGCEAYYPASGL*SRWARC
Trigger: GCAGCGTGCCCATCTGGATCACAGCCCAGAGGCAGG...GTAATAAGCCTCGCAGCCCAGGTCCAGAGCCCCCGGCGAGCCGGTCCCATAACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328313.10
CDS-3UTR TCA 90 bp GGTTATGGGACCGGCTCGCCGGGGGCTCTGGACCTGGGCTGCGAGGCTTATTACCCACCCCTTGGTAGGTaGCGTTCCCGCCCGGGTAGA +
Preference number: 4 (lower is better)
Translates to: GYGTGSPGALDLGCEAYYPPLGR*RSRPGR
Trigger: TCTACCCGGGCGGGAACGTCACCTACCAAGGGGTGG...GTAATAAGCCTCGCAGCCCAGGTCCAGAGCCCCCGGCGAGCCGGTCCCATAACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328313.10
CDS-3UTR TCA 90 bp GTGGCTGCAGACGGCAGCGCCGCTTCGGGAGCGGGTTTTGCAGGAGGAGGGGGCCCAGGTCCTCCTCTGTaGACCACGCCATCACTGTGT +
Preference number: 4 (lower is better)
Translates to: VAADGSAASGAGFAGGGGPGPPL*TTPSLC
Trigger: ACACAGTGATGGCGTGGTTCACAGAGGAGGACCTGG...GCCCCCTCCTCCTGCAAAACCCGCTCCCGAAGCGGCGCTGCCGTCTGCAGCCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328313.10
CDS-3UTR GCA 90 bp GGTTATGGGACCGGCTCGCCGGGGGCTCTGGACCTGGGCTGCGAGGCTTATTACACGGTCCGGTCCACCTaGCGCACCATCTCCCTCCTC +
Preference number: 4 (lower is better)
Translates to: GYGTGSPGALDLGCEAYYTVRST*RTISLL
Trigger: GAGGAGGGAGATGGTGCGGCAGGTGGACCGGACCGT...GTAATAAGCCTCGCAGCCCAGGTCCAGAGCCCCCGGCGAGCCGGTCCCATAACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328313.10
CDS-3UTR GCA 90 bp CGGGGCGGGCCCCTCCCAGCTGACCGAGGCCGGGTCTGCAGGTTCCAGCGCCCGTTGTTGTCAAAGCCGTaGTCCCCATTGTTGAACTGG +
Preference number: 4 (lower is better)
Translates to: RGGPLPADRGRVCRFQRPLLSKP*SPLLNW
Trigger: CCAGTTCAACAATGGGGAGCACGGCTTTGACAACAA...CGGGCGCTGGAACCTGCAGACCCGGCCTCGGTCAGCTGGGAGGGGCCCGCCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328313.10
CDS-3UTR GCA 90 bp TGCCGGGGCGGGCCCCTCCCAGCTGACCGAGGCCGGGTCTGCAGGTTCCAGCGCAGAGCAGATTCTGTGTaGAGCATGGGCAGCAGAGTA +
Preference number: 4 (lower is better)
Translates to: CRGGPLPADRGRVCRFQRRADSV*SMGSRV
Trigger: TACTCTGCTGCCCATGCTGCACACAGAATCTGCTCT...GCGCTGGAACCTGCAGACCCGGCCTCGGTCAGCTGGGAGGGGCCCGCCCCGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328313.10
CDS-3UTR CCA 90 bp GGGGTTGGCGCTGCCGGGGACAGTGGCATGCAGCCTCTGGCCTGGGATAAGCTGAGGCGGTCTGTGAGGTaGTTGCGCGCGATGCTCTCC +
Preference number: 4 (lower is better)
Translates to: GVGAAGDSGMQPLAWDKLRRSVR*LRAMLS
Trigger: GGAGAGCATCGCGCGCAACCACCTCACAGACCGCCT...CAGCTTATCCCAGGCCAGAGGCTGCATGCCACTGTCCCCGGCAGCGCCAACCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328313.10
CDS-3UTR CCA 90 bp CCGCGTGGCTGCAGACGGCAGCGCCGCTTCGGGAGCGGGTTTTGCAGGAGGAGGGGCTTCCTTGAGCCATaGGGCGTTATGCGACCTCAG +
Preference number: 4 (lower is better)
Translates to: PRGCRRQRRFGSGFCRRRGFLEP*GVMRPQ
Trigger: CTGAGGTCGCATAACGCCCCATGGCTCAAGGAAGCC...CCTCCTCCTGCAAAACCCGCTCCCGAAGCGGCGCTGCCGTCTGCAGCCACGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328313.10
CDS-3UTR CCA 90 bp GGGGTTGGCGCTGCCGGGGACAGTGGCATGCAGCCTCTGGCCTGGGATAAGCTGCGGGGGCTCTGGACCTaGGCTGCGAGGCTTATTACC +
Preference number: 4 (lower is better)
Translates to: GVGAAGDSGMQPLAWDKLRGLWT*AARLIT
Trigger: GGTAATAAGCCTCGCAGCCCAGGTCCAGAGCCCCCG...CAGCTTATCCCAGGCCAGAGGCTGCATGCCACTGTCCCCGGCAGCGCCAACCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328313.10
CDS-3UTR CCA 90 bp GGCTCCCCGCTGTGCATCCCACAACCTCCTGCCTTGGGGCTGTGGTCAGCTCCTGGGCAGCCAGGTCAGTaGGAGTCACCTGCTTGGCGG +
Preference number: 4 (lower is better)
Translates to: GSPLCIPQPPALGLWSAPGQPGQ*ESPAWR
Trigger: CCGCCAAGCAGGTGACTCCCACTGACCTGGCTGCCC...AGGAGCTGACCACAGCCCCAAGGCAGGAGGTTGTGGGATGCACAGCGGGGAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576512.1
CDS-3UTR TCA 90 bp CAAGCAGGGGTTGGCGCTGCCGGGGACAGTGGCATGCAGCCTCTGGCCTGGGATACATCAGCAGGGGTGTaGCCCTGGGGTTGTTGGCGT +
Preference number: 4 (lower is better)
Translates to: QAGVGAAGDSGMQPLAWDTSAGV*PWGCWR
Trigger: ACGCCAACAACCCCAGGGTCACACCCCTGCTGATGT...ATCCCAGGCCAGAGGCTGCATGCCACTGTCCCCGGCAGCGCCAACCCCTGCTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000328313.10
CDS-3UTR GCA 90 bp GGGGTTGGCGCTGCCGGGGACAGTGGCATGCAGCCTCTGGCCTGGGATAAGCTGTCCAGATGGGCACGCTaGCGTTGTCCCACCACCTCT +
Preference number: 4 (lower is better)
Translates to: GVGAAGDSGMQPLAWDKLSRWAR*RCPTTS
Trigger: AGAGGTGGTGGGACAACGGCAGCGTGCCCATCTGGA...CAGCTTATCCCAGGCCAGAGGCTGCATGCCACTGTCCCCGGCAGCGCCAACCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328313.10
CDS-3UTR GCA 90 bp CGTGGCTGCAGACGGCAGCGCCGCTTCGGGAGCGGGTTTTGCAGGAGGAGGGGGTGTAGTTGTGTGCGATaGCTTCTTTCCGGCTCCGCG +
Preference number: 4 (lower is better)
Translates to: RGCRRQRRFGSGFCRRRGCSCVR*LLSGSA
Trigger: CGCGGAGCCGGAAAGAAGGCATCGCACACAACTACA...CCCCCTCCTCCTGCAAAACCCGCTCCCGAAGCGGCGCTGCCGTCTGCAGCCACG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328313.10
CDS-3UTR GCA 90 bp CAAGCAGGGGTTGGCGCTGCCGGGGACAGTGGCATGCAGCCTCTGGCCTGGGATAGCAGAGTAGCTAGGTaGCCATCGTTGGCCTCGGGC +
Preference number: 4 (lower is better)
Translates to: QAGVGAAGDSGMQPLAWDSRVAR*PSLASG
Trigger: GCCCGAGGCCAACGATGGGCACCTAGCTACTCTGCT...ATCCCAGGCCAGAGGCTGCATGCCACTGTCCCCGGCAGCGCCAACCCCTGCTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328313.10
CDS-3UTR GCA 90 bp GGGGTTGGCGCTGCCGGGGACAGTGGCATGCAGCCTCTGGCCTGGGATAAGCTGCTTTATTCCCATGGGTaGTTTGTGCCGGGGCGGGCC +
Preference number: 4 (lower is better)
Translates to: GVGAAGDSGMQPLAWDKLLYSHG*FVPGRA
Trigger: GGCCCGCCCCGGCACAAAGCACCCATGGGAATAAAG...CAGCTTATCCCAGGCCAGAGGCTGCATGCCACTGTCCCCGGCAGCGCCAACCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328313.10
CDS-3UTR GCA 90 bp GGCTCCCCGCTGTGCATCCCACAACCTCCTGCCTTGGGGCTGTGGTCAGCTCCTCGCCTGCCTCGTCCCTaGCTGTGGCCGTCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: GSPLCIPQPPALGLWSAPRLPRP*LWPSLL
Trigger: AAGAAGAGACGGCCACAGGCAGGGACGAGGCAGGCG...AGGAGCTGACCACAGCCCCAAGGCAGGAGGTTGTGGGATGCACAGCGGGGAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576512.1
CDS-3UTR CCA 90 bp TGCCGGGGCGGGCCCCTCCCAGCTGACCGAGGCCGGGTCTGCAGGTTCCAGCGCAAGTTGGGGAACTTGTaGAATTCAACCAGGTCGCCA +
Preference number: 4 (lower is better)
Translates to: CRGGPLPADRGRVCRFQRKLGNL*NSTRSP
Trigger: TGGCGACCTGGTTGAATTCCACAAGTTCCCCAACTT...GCGCTGGAACCTGCAGACCCGGCCTCGGTCAGCTGGGAGGGGCCCGCCCCGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328313.10
CDS-3UTR CCA 90 bp GGGGCGGGCCCCTCCCAGCTGACCGAGGCCGGGTCTGCAGGTTCCAGCGCCCGCTCCCCATTGTTGAACTaGACGTTAATTCTCCCATGG +
Preference number: 4 (lower is better)
Translates to: GAGPSQLTEAGSAGSSARSPLLN*TLILPW
Trigger: CCATGGGAGAATTAACGTCCAGTTCAACAATGGGGA...GCGGGCGCTGGAACCTGCAGACCCGGCCTCGGTCAGCTGGGAGGGGCCCGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328313.10
CDS-3UTR CCA 90 bp CCGCGTGGCTGCAGACGGCAGCGCCGCTTCGGGAGCGGGTTTTGCAGGAGGAGGATGAGCTCGTACACGTaGACGCTCTCAAAGGGCTCC +
Preference number: 4 (lower is better)
Translates to: PRGCRRQRRFGSGFCRRRMSSYT*TLSKGS
Trigger: GGAGCCCTTTGAGAGCGTCCACGTGTACGAGCTCAT...CCTCCTCCTGCAAAACCCGCTCCCGAAGCGGCGCTGCCGTCTGCAGCCACGCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328313.10
CDS-3UTR CCA 90 bp GGCTCCCCGCTGTGCATCCCACAACCTCCTGCCTTGGGGCTGTGGTCAGCTCCTCTAGGTGCCCATCGTTaGCCTCGGGCACGATGCCCA +
Preference number: 4 (lower is better)
Translates to: GSPLCIPQPPALGLWSAPLGAHR*PRARCP
Trigger: TGGGCATCGTGCCCGAGGCCAACGATGGGCACCTAG...AGGAGCTGACCACAGCCCCAAGGCAGGAGGTTGTGGGATGCACAGCGGGGAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576512.1
CDS-3UTR CCA 90 bp TGGGACCGGCTCGCCGGGGGCTCTGGACCTGGGCTGCGAGGCTTATTACCAGCAGTGGCATGCAGCCTCTaGCCTGGGATAAGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: WDRLAGGSGPGLRGLLPAVACSL*PGISWG
Trigger: TCCCCAGCTTATCCCAGGCCAGAGGCTGCATGCCAC...TGCTGGTAATAAGCCTCGCAGCCCAGGTCCAGAGCCCCCGGCGAGCCGGTCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328313.10
CDS-3UTR CCA 90 bp GGCTCCCCGCTGTGCATCCCACAACCTCCTGCCTTGGGGCTGTGGTCAGCTCCTGGAGGGTGGGAATTCTaGCCACTGGTCCGGGTGGTC +
Preference number: 4 (lower is better)
Translates to: GSPLCIPQPPALGLWSAPGGWEF*PLVRVV
Trigger: GACCACCCGGACCAGTGGCCAGAATTCCCACCCTCC...AGGAGCTGACCACAGCCCCAAGGCAGGAGGTTGTGGGATGCACAGCGGGGAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576512.1
CDS-3UTR TCA 90 bp GCTCGCCGGGGGCTCTGGACCTGGGCTGCGAGGCTTATTACCAGCACCATAACACCAGCAGCCGGCACATaGGCTCGTACACGTGGACGC +
Preference number: 4 (lower is better)
Translates to: ARRGLWTWAARLITSTITPAAGT*ARTRGR
Trigger: GCGTCCACGTGTACGAGCTCATGTGCCGGCTGCTGG...TGTTATGGTGCTGGTAATAAGCCTCGCAGCCCAGGTCCAGAGCCCCCGGCGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328313.10
CDS-3UTR GCA 90 bp CTCTGGACCTGGGCTGCGAGGCTTATTACCAGCACCATAACAGCCAAGCAGGGGCCCATGGGTGCTTTGTaGCGGGGCGGGCCCCTCCCA +
Preference number: 4 (lower is better)
Translates to: LWTWAARLITSTITAKQGPMGAL*RGGPLP
Trigger: TGGGAGGGGCCCGCCCCGGCACAAAGCACCCATGGG...CCCCTGCTTGGCTGTTATGGTGCTGGTAATAAGCCTCGCAGCCCAGGTCCAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328313.10
CDS-3UTR GCA 90 bp GGTCCGGGTGGTCTGCTCTGGAAAGACCTCCTCCAAGCCCAGAGCAGAGAGGCTTCAGTGGGAGTCACCTaGTTGGCGGGGCCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: GPGGLLWKDLLQAQSREASVGVT*LAGPGS
Trigger: GCTGCCAGGCCCCGCCAAGCAGGTGACTCCCACTGA...AGCCTCTCTGCTCTGGGCTTGGAGGAGGTCTTTCCAGAGCAGACCACCCGGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576512.1
CDS-3UTR GCA 90 bp GGCTCCCCGCTGTGCATCCCACAACCTCCTGCCTTGGGGCTGTGGTCAGCTCCTCATCCCACAACCTCCTaGCTTGGGGCTGTGGTCAGC +
Preference number: 4 (lower is better)
Translates to: GSPLCIPQPPALGLWSAPHPTTS*LGAVVS
Trigger: GCTGACCACAGCCCCAAGGCAGGAGGTTGTGGGATG...AGGAGCTGACCACAGCCCCAAGGCAGGAGGTTGTGGGATGCACAGCGGGGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000576512.1
CDS-3UTR CCA 90 bp TGCCGGGGCGGGCCCCTCCCAGCTGACCGAGGCCGGGTCTGCAGGTTCCAGCGCGCTTCACCTTGCTGGTaGTGTTGTAGTACATGTTGT +
Preference number: 4 (lower is better)
Translates to: CRGGPLPADRGRVCRFQRASPCW*CCSTCC
Trigger: ACAACATGTACTACAACACCACCAGCAAGGTGAAGC...GCGCTGGAACCTGCAGACCCGGCCTCGGTCAGCTGGGAGGGGCCCGCCCCGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328313.10
CDS-3UTR CCA 90 bp GGCTCCCCGCTGTGCATCCCACAACCTCCTGCCTTGGGGCTGTGGTCAGCTCCTGGCCACTGGTCCGGGTaGTCTGCTCTGGAAAGACCT +
Preference number: 4 (lower is better)
Translates to: GSPLCIPQPPALGLWSAPGHWSG*SALERP
Trigger: AGGTCTTTCCAGAGCAGACCACCCGGACCAGTGGCC...AGGAGCTGACCACAGCCCCAAGGCAGGAGGTTGTGGGATGCACAGCGGGGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576512.1
CDS-3UTR CCA 90 bp GGCTCCCCGCTGTGCATCCCACAACCTCCTGCCTTGGGGCTGTGGTCAGCTCCTGGGAATTCTGGCCACTaGTCCGGGTGGTCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: GSPLCIPQPPALGLWSAPGNSGH*SGWSAL
Trigger: CAGAGCAGACCACCCGGACCAGTGGCCAGAATTCCC...AGGAGCTGACCACAGCCCCAAGGCAGGAGGTTGTGGGATGCACAGCGGGGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576512.1
CDS-3UTR GCA 90 bp GGCTCCCCGCTGTGCATCCCACAACCTCCTGCCTTGGGGCTGTGGTCAGCTCCTCCTGGCTCTTTCCCCTaGCTGGTGTGTCTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: GSPLCIPQPPALGLWSAPPGSFP*LVCLAS
Trigger: AGAAGCCAGACACACCAGGCAGGGGAAAGAGCCAGG...AGGAGCTGACCACAGCCCCAAGGCAGGAGGTTGTGGGATGCACAGCGGGGAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000576512.1
CDS-3UTR CCA 90 bp GGCTCCCCGCTGTGCATCCCACAACCTCCTGCCTTGGGGCTGTGGTCAGCTCCTTGGCCTAGGAGGCTGTaGCTGCACAGACAGACAAGG +
Preference number: 4 (lower is better)
Translates to: GSPLCIPQPPALGLWSAPWPRRL*LHRQTR
Trigger: CCTTGTCTGTCTGTGCAGCCACAGCCTCCTAGGCCA...AGGAGCTGACCACAGCCCCAAGGCAGGAGGTTGTGGGATGCACAGCGGGGAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576512.1
CDS-3UTR TCA 90 bp GCGAGGCTTATTACCAGCACCATAACAGCCAAGCAGGGGTTGGCGCTGCCGGGGTGGGGTGGGCGTCCTTaGGGGCATCGTACACCTTCT +
Preference number: 4 (lower is better)
Translates to: ARLITSTITAKQGLALPGWGGRP*GHRTPS
Trigger: AGAAGGTGTACGATGCCCTCAAGGACGCCCACCCCA...CCCCGGCAGCGCCAACCCCTGCTTGGCTGTTATGGTGCTGGTAATAAGCCTCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000328313.10
CDS-3UTR GCA 90 bp CCTTGGGGCTGTGGTCAGCTCCTGTTAGAGCCTCGCTCTGTGCCAACCTGCAGGAGCAGAGTAGCTAGGTaGCCATCGTTGGCCTCGGGC +
Preference number: 4 (lower is better)
Translates to: PWGCGQLLLEPRSVPTCRSRVAR*PSLASG
Trigger: GCCCGAGGCCAACGATGGGCACCTAGCTACTCTGCT...CCTGCAGGTTGGCACAGAGCGAGGCTCTAACAGGAGCTGACCACAGCCCCAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576512.1
CDS-3UTR CCA 90 bp GGTTATGGGACCGGCTCGCCGGGGGCTCTGGACCTGGGCTGCGAGGCTTATTACACGGTCGTCATGCCGTaGTCGGATGTGATGATCAGG +
Preference number: 4 (lower is better)
Translates to: GYGTGSPGALDLGCEAYYTVVMP*SDVMIR
Trigger: CCTGATCATCACATCCGACCACGGCATGACGACCGT...GTAATAAGCCTCGCAGCCCAGGTCCAGAGCCCCCGGCGAGCCGGTCCCATAACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328313.10
CDS-3UTR CCA 90 bp GGCTCCCCGCTGTGCATCCCACAACCTCCTGCCTTGGGGCTGTGGTCAGCTCCTTCTGACCTTGAGCCATaGGGCGTTATGCGACCTCAG +
Preference number: 4 (lower is better)
Translates to: GSPLCIPQPPALGLWSAPSDLEP*GVMRPQ
Trigger: CTGAGGTCGCATAACGCCCCATGGCTCAAGGTCAGA...AGGAGCTGACCACAGCCCCAAGGCAGGAGGTTGTGGGATGCACAGCGGGGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576512.1
CDS-3UTR CCA 90 bp CTCCTCCCAAATGCACCGCAGGTGACGGTTTCCGAGCTATCCCAGTGGAGCACATGGGAGTCACCTGCTTaGCGGGGCCTGGCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: LLPNAPQVTVSELSQWSTWESPA*RGLAAL
Trigger: CAGAGCTGCCAGGCCCCGCCAAGCAGGTGACTCCCA...TGTGCTCCACTGGGATAGCTCGGAAACCGTCACCTGCGGTGCATTTGGGAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576512.1
CDS-3UTR CCA 90 bp ACACTGGCCTTCTGTCTCATCCCAAACACGCCGAACCTGTCCCACCGCGGGCCTCACAACCTCCTGCCTTaGGGCTGTGGTCAGCTCCTG +
Preference number: 4 (lower is better)
Translates to: TLAFCLIPNTPNLSHRGPHNLLP*GCGQLL
Trigger: CAGGAGCTGACCACAGCCCCAAGGCAGGAGGTTGTG...AGGCCCGCGGTGGGACAGGTTCGGCGTGTTTGGGATGAGACAGAAGGCCAGTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576512.1
CDS-3UTR TCA 90 bp GCGAGGCTTATTACCAGCACCATAACAGCCAAGCAGGGGTTGGCGCTGCCGGGGCCCCGAAGTAGAGTGTaGCCAGATCCAGGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: ARLITSTITAKQGLALPGPRSRV*PDPGPP
Trigger: AGGAGGACCTGGATCTGGTCACACTCTACTTCGGGG...CCCCGGCAGCGCCAACCCCTGCTTGGCTGTTATGGTGCTGGTAATAAGCCTCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328313.10
CDS-3UTR TCA 90 bp TGTCCCTGGCTCTTTCCCCTGCCTGGTGTGTCTGGCTTCTTCTGGTGTGTCTGTCCAGCAGCCGGCACATaGGCTCGTACACGTGGACGC +
Preference number: 4 (lower is better)
Translates to: CPWLFPLPGVSGFFWCVCPAAGT*ARTRGR
Trigger: GCGTCCACGTGTACGAGCTCATGTGCCGGCTGCTGG...ACAGACACACCAGAAGAAGCCAGACACACCAGGCAGGGGAAAGAGCCAGGGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576512.1
CDS-3UTR GCA 90 bp CCCCCGCGTGGCTGCAGACGGCAGCGCCGCTTCGGGAGCGGGTTTTGCAGGAGGATTTTTGTAGTTGTGTaGGATGCCTTCTTTCCGGCT +
Preference number: 4 (lower is better)
Translates to: PPRGCRRQRRFGSGFCRRIFVVV*DAFFPA
Trigger: AGCCGGAAAGAAGGCATCGCACACAACTACAAAAAT...CCTCCTGCAAAACCCGCTCCCGAAGCGGCGCTGCCGTCTGCAGCCACGCGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000328313.10
CDS-3UTR GCA 90 bp GCTCGCCGGGGGCTCTGGACCTGGGCTGCGAGGCTTATTACCAGCACCATAACAGCTCTGGACCTGGGCTaGGAGGCTTATTACCAGCAC +
Preference number: 4 (lower is better)
Translates to: ARRGLWTWAARLITSTITALDLG*EAYYQH
Trigger: GTGCTGGTAATAAGCCTCGCAGCCCAGGTCCAGAGC...TGTTATGGTGCTGGTAATAAGCCTCGCAGCCCAGGTCCAGAGCCCCCGGCGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328313.10
CDS-3UTR CCA 90 bp GCGAGGCTTATTACCAGCACCATAACAGCCAAGCAGGGGTTGGCGCTGCCGGGGTGGCCTTTATTCCCATaGGTGCTTTGTGCCGGGGCG +
Preference number: 4 (lower is better)
Translates to: ARLITSTITAKQGLALPGWPLFP*VLCAGA
Trigger: CGCCCCGGCACAAAGCACCCATGGGAATAAAGGCCA...CCCCGGCAGCGCCAACCCCTGCTTGGCTGTTATGGTGCTGGTAATAAGCCTCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328313.10
CDS-3UTR CCA 90 bp TGTCCCTGGCTCTTTCCCCTGCCTGGTGTGTCTGGCTTCTTCTGGTGTGTCTGTGCTGGGACATCAGGGTaGAGGGTCAGGGAGCGTGGG +
Preference number: 4 (lower is better)
Translates to: CPWLFPLPGVSGFFWCVCAGTSG*RVRERG
Trigger: CCCACGCTCCCTGACCCTCCACCCTGATGTCCCAGC...ACAGACACACCAGAAGAAGCCAGACACACCAGGCAGGGGAAAGAGCCAGGGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576512.1
CDS-3UTR CCA 90 bp CACTGGTCCGGGTGGTCTGCTCTGGAAAGACCTCCTCCAAGCCCAGAGCAGAGACCGGGTGGTCTGCTCTaGAAAGACCTCCTCCAAGCC +
Preference number: 4 (lower is better)
Translates to: HWSGWSALERPPPSPEQRPGGLL*KDLLQA
Trigger: GGCTTGGAGGAGGTCTTTCCAGAGCAGACCACCCGG...TCTCTGCTCTGGGCTTGGAGGAGGTCTTTCCAGAGCAGACCACCCGGACCAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576512.1
CDS-3UTR CCA 90 bp CCTTGGGGCTGTGGTCAGCTCCTGTTAGAGCCTCGCTCTGTGCCAACCTGCAGGGCTTTTGGGGGAGGGTaGGAATTCTGGCCACTGGTC +
Preference number: 4 (lower is better)
Translates to: PWGCGQLLLEPRSVPTCRAFGGG*EFWPLV
Trigger: GACCAGTGGCCAGAATTCCCACCCTCCCCCAAAAGC...CCTGCAGGTTGGCACAGAGCGAGGCTCTAACAGGAGCTGACCACAGCCCCAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000576512.1
CDS-3UTR CCA 90 bp GGTCCGGGTGGTCTGCTCTGGAAAGACCTCCTCCAAGCCCAGAGCAGAGAGGCTTGTGTAACCTCAGCTTaGGGCTCCCCGCTGTGCATC +
Preference number: 4 (lower is better)
Translates to: GPGGLLWKDLLQAQSREACVTSA*GSPLCI
Trigger: GATGCACAGCGGGGAGCCCCAAGCTGAGGTTACACA...AGCCTCTCTGCTCTGGGCTTGGAGGAGGTCTTTCCAGAGCAGACCACCCGGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576512.1
CDS-3UTR CCA 90 bp GGTCCGGGTGGTCTGCTCTGGAAAGACCTCCTCCAAGCCCAGAGCAGAGAGGCTCAGCCACCTCCAAACTaGCCACTTCCTGCTCCCGTT +
Preference number: 4 (lower is better)
Translates to: GPGGLLWKDLLQAQSREAQPPPN*PLPAPV
Trigger: AACGGGAGCAGGAAGTGGCCAGTTTGGAGGTGGCTG...AGCCTCTCTGCTCTGGGCTTGGAGGAGGTCTTTCCAGAGCAGACCACCCGGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576512.1
3UTR CAA 72 bp AGGCTTATTACCAGCACCATAACAGCCAAGCAGGGGTaGGCGCTGCCGGGGACAGTGGCATGCAGCCTCTGG +
Preference number: 4 (lower is better)
Translates to: RLITSTITAKQG*ALPGTVACSLW
Trigger: CCAGAGGCTGCATGCCACTGTCCCCGGCAGCGCCAACCCCTGCTTGGCTGTTATGGTGCTGGTAATAAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328313.10
3UTR CAA 72 bp GCGCCTGCCTCGTCCCTGCCTGTGGCCGTCTCTTCTTaGCCATCACAAGCATCTGAGCACTCTGTGCGTGGA +
Preference number: 4 (lower is better)
Translates to: APASSLPVAVSS*PSQASEHSVRG
Trigger: TCCACGCACAGAGTGCTCAGATGCTTGTGATGGCAAAGAAGAGACGGCCACAGGCAGGGACGAGGCAGGCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576512.1
CDS-3UTR TCA 90 bp CCTCGCTCTGTGCCAACCTGCAGGCACACTGGCCTTCTGTCTCATCCCAAACACACATCAGCAGGGGTGTaGCCCTGGGGTTGTTGGCGT +
Preference number: 4 (lower is better)
Translates to: PRSVPTCRHTGLLSHPKHTSAGV*PWGCWR
Trigger: ACGCCAACAACCCCAGGGTCACACCCCTGCTGATGT...GTGTTTGGGATGAGACAGAAGGCCAGTGTGCCTGCAGGTTGGCACAGAGCGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576512.1
CDS-3UTR TCA 90 bp TCCCGTTTCTGTCCCCGGCCCAGCAGTGGGAGCCACTCATTTAATCATCAACCTTCGGGATCTCAGGGGTaGTGGCCTCTCTGGGGCAGC +
Preference number: 4 (lower is better)
Translates to: SRFCPRPSSGSHSFNHQPSGSQG*WPLWGS
Trigger: GCTGCCCCAGAGAGGCCATCACCCCTGAGATCCCGA...AGGTTGATGATTAAATGAGTGGCTCCCACTGCTGGGCCGGGGACAGAAACGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000576512.1
CDS-3UTR GCA 90 bp GACTGTCGCGGCTTGGCCTTTATTCCCATGGGTGCTTTGTGCCGGGGCGGGCCCAGGGCAGCTTCACCTTaGTGGTGGTGTTGTAGTACA +
Preference number: 4 (lower is better)
Translates to: DCRGLAFIPMGALCRGGPRAASP*WWCCST
Trigger: TGTACTACAACACCACCAGCAAGGTGAAGCTGCCCT...GGGCCCGCCCCGGCACAAAGCACCCATGGGAATAAAGGCCAAGCCGCGACAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328313.10
CDS-3UTR GCA 90 bp GGCTCCCCGCTGTGCATCCCACAACCTCCTGCCTTGGGGCTGTGGTCAGCTCCTAGCCATGGGGCGTTATaGGACCTCAGACAGAAGAAT +
Preference number: 4 (lower is better)
Translates to: GSPLCIPQPPALGLWSAPSHGAL*DLRQKN
Trigger: ATTCTTCTGTCTGAGGTCGCATAACGCCCCATGGCT...AGGAGCTGACCACAGCCCCAAGGCAGGAGGTTGTGGGATGCACAGCGGGGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000576512.1
CDS-3UTR CCA 90 bp CTCCTCCCAAATGCACCGCAGGTGACGGTTTCCGAGCTATCCCAGTGGAGCACACCTGCCTTGGGGCTGTaGTCAGCTCCTGTTAGAGCC +
Preference number: 4 (lower is better)
Translates to: LLPNAPQVTVSELSQWSTPALGL*SAPVRA
Trigger: GGCTCTAACAGGAGCTGACCACAGCCCCAAGGCAGG...TGTGCTCCACTGGGATAGCTCGGAAACCGTCACCTGCGGTGCATTTGGGAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576512.1
CDS-3UTR GCA 90 bp CACTGGTCCGGGTGGTCTGCTCTGGAAAGACCTCCTCCAAGCCCAGAGCAGAGAAGCTCTCCTCCCAAATaGACCGCAGGTGACGGTTTC +
Preference number: 4 (lower is better)
Translates to: HWSGWSALERPPPSPEQRSSPPK*TAGDGF
Trigger: GAAACCGTCACCTGCGGTGCATTTGGGAGGAGAGCT...TCTCTGCTCTGGGCTTGGAGGAGGTCTTTCCAGAGCAGACCACCCGGACCAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576512.1
CDS-3UTR CCA 90 bp CTGTCGCGGCTTGGCCTTTATTCCCATGGGTGCTTTGTGCCGGGGCGGGCCCCTGCAGCTTCACCTTGCTaGTGGTGTTGTAGTACATGT +
Preference number: 4 (lower is better)
Translates to: LSRLGLYSHGCFVPGRAPAASPC*WCCSTC
Trigger: ACATGTACTACAACACCACCAGCAAGGTGAAGCTGC...AGGGGCCCGCCCCGGCACAAAGCACCCATGGGAATAAAGGCCAAGCCGCGACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328313.10
CDS-3UTR CCA 90 bp CCAAATGCACCGCAGGTGACGGTTTCCGAGCTATCCCAGTGGAGCACAGAGATGCCCGCCTCTGCCTTCTaGGTCTCTGACCTTGAGCCA +
Preference number: 4 (lower is better)
Translates to: PNAPQVTVSELSQWSTEMPASAF*VSDLEP
Trigger: TGGCTCAAGGTCAGAGACCCAGAAGGCAGAGGCGGG...CATCTCTGTGCTCCACTGGGATAGCTCGGAAACCGTCACCTGCGGTGCATTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576512.1
CDS-3UTR CCA 90 bp TCCCGTTTCTGTCCCCGGCCCAGCAGTGGGAGCCACTCATTTAATCATCAACCTCTGCTTGGCGGGGCCTaGCAGCTCTGTTCTGGTTGC +
Preference number: 4 (lower is better)
Translates to: SRFCPRPSSGSHSFNHQPLLGGA*QLCSGC
Trigger: GCAACCAGAACAGAGCTGCCAGGCCCCGCCAAGCAG...AGGTTGATGATTAAATGAGTGGCTCCCACTGCTGGGCCGGGGACAGAAACGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576512.1
CDS-3UTR CCA 90 bp CTCCTCCCAAATGCACCGCAGGTGACGGTTTCCGAGCTATCCCAGTGGAGCACACCTGCCTGGTGTGTCTaGCTTCTTCTGGTGTGTCTG +
Preference number: 4 (lower is better)
Translates to: LLPNAPQVTVSELSQWSTPAWCV*LLLVCL
Trigger: CAGACACACCAGAAGAAGCCAGACACACCAGGCAGG...TGTGCTCCACTGGGATAGCTCGGAAACCGTCACCTGCGGTGCATTTGGGAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576512.1
CDS-3UTR TCA 90 bp TGCTCCCGTTTCTGTCCCCGGCCCAGCAGTGGGAGCCACTCATTTAATCATCAACAAATGCACCGCAGGTaGCGGTTTCCGAGCTATCCC +
Preference number: 4 (lower is better)
Translates to: CSRFCPRPSSGSHSFNHQQMHRR*RFPSYP
Trigger: GGGATAGCTCGGAAACCGTCACCTGCGGTGCATTTG...TTGATGATTAAATGAGTGGCTCCCACTGCTGGGCCGGGGACAGAAACGGGAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576512.1
CDS-3UTR CCA 90 bp TGGACTGTCTTGTTCGCTGCATATCCTGAGCCCAGACCAGAGCGTGGCATGGAGTCCGAGCTATCCCAGTaGAGCACAGAGATGGCAGGA +
Preference number: 4 (lower is better)
Translates to: WTVLFAAYPEPRPERGMESELSQ*STEMAG
Trigger: TCCTGCCATCTCTGTGCTCCACTGGGATAGCTCGGA...CTCCATGCCACGCTCTGGTCTGGGCTCAGGATATGCAGCGAACAAGACAGTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576512.1
CDS-3UTR CCA 90 bp ACACTGGCCTTCTGTCTCATCCCAAACACGCCGAACCTGTCCCACCGCGGGCCTGTGTCTGGCTTCTTCTaGTGTGTCTGTCATTCTGGT +
Preference number: 4 (lower is better)
Translates to: TLAFCLIPNTPNLSHRGPVSGFF*CVCHSG
Trigger: ACCAGAATGACAGACACACCAGAAGAAGCCAGACAC...AGGCCCGCGGTGGGACAGGTTCGGCGTGTTTGGGATGAGACAGAAGGCCAGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576512.1
CDS-3UTR CCA 90 bp CCAAATGCACCGCAGGTGACGGTTTCCGAGCTATCCCAGTGGAGCACAGAGATGGCTCTTTCCCCTGCCTaGTGTGTCTGGCTTCTTCTG +
Preference number: 4 (lower is better)
Translates to: PNAPQVTVSELSQWSTEMALSPA*CVWLLL
Trigger: CAGAAGAAGCCAGACACACCAGGCAGGGGAAAGAGC...CATCTCTGTGCTCCACTGGGATAGCTCGGAAACCGTCACCTGCGGTGCATTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576512.1
CDS-3UTR TCA 90 bp GGGAGCCACTCATTTAATCATCAACCTCAGACCCTGTGTAACCTCAGCTTGGGGGCTCTGGCCAGAGGCTaGGGGAGTTCTGGCTTTTGG +
Preference number: 4 (lower is better)
Translates to: GSHSFNHQPQTLCNLSLGALARG*GSSGFW
Trigger: CCAAAAGCCAGAACTCCCTCAGCCTCTGGCCAGAGC...CCCCAAGCTGAGGTTACACAGGGTCTGAGGTTGATGATTAAATGAGTGGCTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000576512.1
CDS-3UTR GCA 90 bp GGGAGCCACTCATTTAATCATCAACCTCAGACCCTGTGTAACCTCAGCTTGGGGCTGGTCCGGGTGGTCTaGTCTGGAAAGACCTCCTCC +
Preference number: 4 (lower is better)
Translates to: GSHSFNHQPQTLCNLSLGLVRVV*SGKTSS
Trigger: GGAGGAGGTCTTTCCAGAGCAGACCACCCGGACCAG...CCCCAAGCTGAGGTTACACAGGGTCTGAGGTTGATGATTAAATGAGTGGCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576512.1
CDS-3UTR GCA 90 bp GGCTCCCCGCTGTGCATCCCACAACCTCCTGCCTTGGGGCTGTGGTCAGCTCCTGTGCGTGGATTCATTTaGTTTTGTGTTCTCTGCTTT +
Preference number: 4 (lower is better)
Translates to: GSPLCIPQPPALGLWSAPVRGFI*FCVLCF
Trigger: AAAGCAGAGAACACAAAAGCAAATGAATCCACGCAC...AGGAGCTGACCACAGCCCCAAGGCAGGAGGTTGTGGGATGCACAGCGGGGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000576512.1
CDS-3UTR GCA 90 bp CTCCTCCCAAATGCACCGCAGGTGACGGTTTCCGAGCTATCCCAGTGGAGCACATGGCCGTCTCTTCTTTaGCATCACAAGCATCTGAGC +
Preference number: 4 (lower is better)
Translates to: LLPNAPQVTVSELSQWSTWPSLL*HHKHLS
Trigger: GCTCAGATGCTTGTGATGGCAAAGAAGAGACGGCCA...TGTGCTCCACTGGGATAGCTCGGAAACCGTCACCTGCGGTGCATTTGGGAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576512.1
CDS-3UTR CCA 90 bp GGTCCGGGTGGTCTGCTCTGGAAAGACCTCCTCCAAGCCCAGAGCAGAGAGGCTTCCCCATTGTTGAACTaGACGTTAATTCTCCCATGG +
Preference number: 4 (lower is better)
Translates to: GPGGLLWKDLLQAQSREASPLLN*TLILPW
Trigger: CCATGGGAGAATTAACGTCCAGTTCAACAATGGGGA...AGCCTCTCTGCTCTGGGCTTGGAGGAGGTCTTTCCAGAGCAGACCACCCGGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576512.1
CDS-3UTR CCA 90 bp TCCCGTTTCTGTCCCCGGCCCAGCAGTGGGAGCCACTCATTTAATCATCAACCTATGAGCTCGTACACGTaGACGCTCTCAAAGGGCTCC +
Preference number: 4 (lower is better)
Translates to: SRFCPRPSSGSHSFNHQPMSSYT*TLSKGS
Trigger: GGAGCCCTTTGAGAGCGTCCACGTGTACGAGCTCAT...AGGTTGATGATTAAATGAGTGGCTCCCACTGCTGGGCCGGGGACAGAAACGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576512.1
CDS-3UTR CCA 90 bp AGGTATTTGGAATCTGTGCACATTGCAGCTTCTCCACCCCGCCACTGGAATGTCCCAGAGCAGAGAGGCTaGAAGGGTCAGCCTCGGGAT +
Preference number: 4 (lower is better)
Translates to: RYLESVHIAASPPRHWNVPEQRG*KGQPRD
Trigger: ATCCCGAGGCTGACCCTTCCAGCCTCTCTGCTCTGG...GACATTCCAGTGGCGGGGTGGAGAAGCTGCAATGTGCACAGATTCCAAATACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576512.1
3UTR CAA 72 bp TTTAATCATCAACCTCAGACCCTGTGTAACCTCAGCTaGGGGCTCCCCGCTGTGCATCCCACAACCTCCTGC +
Preference number: 4 (lower is better)
Translates to: FNHQPQTLCNLS*GLPAVHPTTSC
Trigger: GCAGGAGGTTGTGGGATGCACAGCGGGGAGCCCCAAGCTGAGGTTACACAGGGTCTGAGGTTGATGATTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576512.1
CDS-3UTR CCA 90 bp TGCTCCCGTTTCTGTCCCCGGCCCAGCAGTGGGAGCCACTCATTTAATCATCAAAACCTGCAGGCACACTaGCCTTCTGTCTCATCCCAA +
Preference number: 4 (lower is better)
Translates to: CSRFCPRPSSGSHSFNHQNLQAH*PSVSSQ
Trigger: TTGGGATGAGACAGAAGGCCAGTGTGCCTGCAGGTT...TTGATGATTAAATGAGTGGCTCCCACTGCTGGGCCGGGGACAGAAACGGGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576512.1
3UTR CAA 72 bp GTCGTGCCTCTTAAAGGTATTTGGAATCTGTGCACATaGCAGCTTCTCCACCCCGCCACTGGAATGTCCGGC +
Preference number: 4 (lower is better)
Translates to: VVPLKGIWNLCT*QLLHPATGMSG
Trigger: GCCGGACATTCCAGTGGCGGGGTGGAGAAGCTGCAATGTGCACAGATTCCAAATACCTTTAAGAGGCACGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576512.1
CDS-3UTR TCA 90 bp CTCCTCCCAAATGCACCGCAGGTGACGGTTTCCGAGCTATCCCAGTGGAGCACATTCGGGATGAATGAATaGCTTTCTTCTGCTTGGCCT +
Preference number: 4 (lower is better)
Translates to: LLPNAPQVTVSELSQWSTFGMNE*LSSAWP
Trigger: AGGCCAAGCAGAAGAAAGTCATTCATTCATCCCGAA...TGTGCTCCACTGGGATAGCTCGGAAACCGTCACCTGCGGTGCATTTGGGAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576512.1
CDS-3UTR GCA 90 bp TCCCGTTTCTGTCCCCGGCCCAGCAGTGGGAGCCACTCATTTAATCATCAACCTAGAGCAGATTCTGTGTaGAGCATGGGCAGCAGAGTA +
Preference number: 4 (lower is better)
Translates to: SRFCPRPSSGSHSFNHQPRADSV*SMGSRV
Trigger: TACTCTGCTGCCCATGCTGCACACAGAATCTGCTCT...AGGTTGATGATTAAATGAGTGGCTCCCACTGCTGGGCCGGGGACAGAAACGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576512.1
CDS-3UTR TCA 90 bp TGGACTGTCTTGTTCGCTGCATATCCTGAGCCCAGACCAGAGCGTGGCATGGAGTCTTGCACCTTTAAATaGCAGGTCCTGGACTGTCTT +
Preference number: 4 (lower is better)
Translates to: WTVLFAAYPEPRPERGMESCTFK*QVLDCL
Trigger: AAGACAGTCCAGGACCTGTCATTTAAAGGTGCAAGA...CTCCATGCCACGCTCTGGTCTGGGCTCAGGATATGCAGCGAACAAGACAGTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576512.1
CDS-3UTR GCA 90 bp TGCTCCCGTTTCTGTCCCCGGCCCAGCAGTGGGAGCCACTCATTTAATCATCAATTGTTGTCAAAGCCGTaGTCCCCATTGTTGAACTGG +
Preference number: 4 (lower is better)
Translates to: CSRFCPRPSSGSHSFNHQLLSKP*SPLLNW
Trigger: CCAGTTCAACAATGGGGAGCACGGCTTTGACAACAA...TTGATGATTAAATGAGTGGCTCCCACTGCTGGGCCGGGGACAGAAACGGGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576512.1
CDS-3UTR GCA 90 bp CCTCGCTCTGTGCCAACCTGCAGGCACACTGGCCTTCTGTCTCATCCCAAACACAAACCTCGAATGTCGTaGCTCTTAAAGGTATTTGGA +
Preference number: 4 (lower is better)
Translates to: PRSVPTCRHTGLLSHPKHKPRMS*LLKVFG
Trigger: TCCAAATACCTTTAAGAGGCACGACATTCGAGGTTT...GTGTTTGGGATGAGACAGAAGGCCAGTGTGCCTGCAGGTTGGCACAGAGCGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576512.1
CDS-3UTR GCA 90 bp TCCCGTTTCTGTCCCCGGCCCAGCAGTGGGAGCCACTCATTTAATCATCAACCTCATCTGAGCACTCTGTaGGTGGATTCATTTGCTTTT +
Preference number: 4 (lower is better)
Translates to: SRFCPRPSSGSHSFNHQPHLSTL*VDSFAF
Trigger: AAAAGCAAATGAATCCACGCACAGAGTGCTCAGATG...AGGTTGATGATTAAATGAGTGGCTCCCACTGCTGGGCCGGGGACAGAAACGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576512.1
CDS-3UTR CCA 90 bp TTTCATTTTTGCATTTTCTTCACCCTCCCACATAATCTGTCCACAAACCTCGAAGCCCAGACCAGAGCGTaGCATGGAGCTGGCTCCCGT +
Preference number: 4 (lower is better)
Translates to: FHFCIFFTLPHNLSTNLEAQTRA*HGAGSR
Trigger: ACGGGAGCCAGCTCCATGCCACGCTCTGGTCTGGGC...TTCGAGGTTTGTGGACAGATTATGTGGGAGGGTGAAGAAAATGCAAAAATGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000576512.1
3UTR CAA 72 bp TTTCTTGCACCTTTAAATGACAGGTCCTGGACTGTCTaGTTCGCTGCATATCCTGAGCCCAGACCAGAGCGT +
Preference number: 4 (lower is better)
Translates to: FLAPLNDRSWTV*FAAYPEPRPER
Trigger: ACGCTCTGGTCTGGGCTCAGGATATGCAGCGAACAAGACAGTCCAGGACCTGTCATTTAAAGGTGCAAGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576512.1
CDS-3UTR CCA 90 bp TCCCGTTTCTGTCCCCGGCCCAGCAGTGGGAGCCACTCATTTAATCATCAACCTCCTCTTAAAGGTATTTaGAATCTGTGCACATTGCAG +
Preference number: 4 (lower is better)
Translates to: SRFCPRPSSGSHSFNHQPPLKGI*NLCTLQ
Trigger: CTGCAATGTGCACAGATTCCAAATACCTTTAAGAGG...AGGTTGATGATTAAATGAGTGGCTCCCACTGCTGGGCCGGGGACAGAAACGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576512.1
CDS-3UTR CCA 90 bp TTTCATTTTTGCATTTTCTTCACCCTCCCACATAATCTGTCCACAAACCTCGAAAGGCTGAGGGAGTTCTaGCTTTTGGGGGAGGGTGGG +
Preference number: 4 (lower is better)
Translates to: FHFCIFFTLPHNLSTNLERLREF*LLGEGG
Trigger: CCCACCCTCCCCCAAAAGCCAGAACTCCCTCAGCCT...TTCGAGGTTTGTGGACAGATTATGTGGGAGGGTGAAGAAAATGCAAAAATGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000576512.1
CDS-3UTR TCA 90 bp AGGTATTTGGAATCTGTGCACATTGCAGCTTCTCCACCCCGCCACTGGAATGTCTATTTTCGGGATGAATaGATGACTTTCTTCTGCTTG +
Preference number: 4 (lower is better)
Translates to: RYLESVHIAASPPRHWNVYFRDE*MTFFCL
Trigger: CAAGCAGAAGAAAGTCATTCATTCATCCCGAAAATA...GACATTCCAGTGGCGGGGTGGAGAAGCTGCAATGTGCACAGATTCCAAATACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576512.1
CDS-3UTR CAA 90 bp GGGGCGGGCCCCTCCCAGCTGACCGAGGCCGGGTCTGCAGGTTCCAGCGCCCGCAGGTCGCCAGCCCGTTaGTCCACGGTCGTCATGCCG +
Preference number: 5 (lower is better)
Translates to: GAGPSQLTEAGSAGSSARRSPAR*STVVMP
Trigger: CGGCATGACGACCGTGGACAAACGGGCTGGCGACCT...GCGGGCGCTGGAACCTGCAGACCCGGCCTCGGTCAGCTGGGAGGGGCCCGCCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328313.10
CDS GCA 90 bp TCCGCGACCAGCAGAGCATCGCAGCGAGACAGCCGGCCCAGGGCCTaGGGGCAGCTCCCGGCGGCTTCCTTGAGCCATGGGGCGTTATGC +
Preference number: 5 (lower is better)
Translates to: SATSRASQRDSRPRA*GQLPAASLSHGALC
Trigger: GCATAACGCCCCATGGCTCAAGGAAGCCGCCGGGAGCTGCCCGCAGGCCCTGGGCCGGCTGTCTCGCTGCGATGCTCTGCTGGTCGCGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328313.10
CDS-3UTR CAA 90 bp CCCCCGCGTGGCTGCAGACGGCAGCGCCGCTTCGGGAGCGGGTTTTGCAGGAGGTTGGGGTGGGCGTCCTaGAGGGCATCGTACACCTTC +
Preference number: 5 (lower is better)
Translates to: PPRGCRRQRRFGSGFCRRLGWAS*RASYTF
Trigger: GAAGGTGTACGATGCCCTCAAGGACGCCCACCCCAA...CCTCCTGCAAAACCCGCTCCCGAAGCGGCGCTGCCGTCTGCAGCCACGCGGGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000328313.10
CDS-3UTR CAA 90 bp GGGGTTGGCGCTGCCGGGGACAGTGGCATGCAGCCTCTGGCCTGGGATAAGCTGATTCCCATGGGTGCTTaGTGCCGGGGCGGGCCCCTC +
Preference number: 5 (lower is better)
Translates to: GVGAAGDSGMQPLAWDKLIPMGA*CRGGPL
Trigger: GAGGGGCCCGCCCCGGCACAAAGCACCCATGGGAAT...CAGCTTATCCCAGGCCAGAGGCTGCATGCCACTGTCCCCGGCAGCGCCAACCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000328313.10
CDS-3UTR CAA 90 bp CTGTCGCGGCTTGGCCTTTATTCCCATGGGTGCTTTGTGCCGGGGCGGGCCCCTGCTAGGTGCCCATCGTaGGCCTCGGGCACGATGCCC +
Preference number: 5 (lower is better)
Translates to: LSRLGLYSHGCFVPGRAPARCPS*ASGTMP
Trigger: GGGCATCGTGCCCGAGGCCAACGATGGGCACCTAGC...AGGGGCCCGCCCCGGCACAAAGCACCCATGGGAATAAAGGCCAAGCCGCGACAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328313.10
CDS-3UTR CAA 90 bp GACCGGCTCGCCGGGGGCTCTGGACCTGGGCTGCGAGGCTTATTACCAGCACCACTCCCGGCGGCTTCCTaGAGCCATGGGGCGTTATGC +
Preference number: 5 (lower is better)
Translates to: DRLAGGSGPGLRGLLPAPLPAAS*SHGALC
Trigger: GCATAACGCCCCATGGCTCAAGGAAGCCGCCGGGAG...TGGTGCTGGTAATAAGCCTCGCAGCCCAGGTCCAGAGCCCCCGGCGAGCCGGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328313.10
CDS TCA 90 bp GGTGCCCATCGTTGGCCTCGGGCACGATGCCCAGCAGCCGGCACATaGGCTCGTACACGTGGACGCTCTCAAAGGGCTCCACCTCCAGGC +
Preference number: 5 (lower is better)
Translates to: GAHRWPRARCPAAGT*ARTRGRSQRAPPPG
Trigger: GCCTGGAGGTGGAGCCCTTTGAGAGCGTCCACGTGTACGAGCTCATGTGCCGGCTGCTGGGCATCGTGCCCGAGGCCAACGATGGGCACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328313.10
ENST00000576512.1
CDS CCA 90 bp GCCTCGGGCACGATGCCCAGCAGCCGGCACATGAGCTCGTACACGTaGACGCTCTCAAAGGGCTCCACCTCCAGGCCCGCCCTGAAGCTA +
Preference number: 5 (lower is better)
Translates to: ASGTMPSSRHMSSYT*TLSKGSTSRPALKL
Trigger: TAGCTTCAGGGCGGGCCTGGAGGTGGAGCCCTTTGAGAGCGTCCACGTGTACGAGCTCATGTGCCGGCTGCTGGGCATCGTGCCCGAGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328313.10
ENST00000576512.1
CDS TCA 90 bp CGATGCCTTCTTTCCGGCTCCGCGTCACAGCCACCCCTTGGTAGGTaGCGTTCCCGCCCGGGTAGAAGAAGGAGCCAGCCCTCAGGCCCT +
Preference number: 5 (lower is better)
Translates to: RCLLSGSASQPPLGR*RSRPGRRRSQPSGP
Trigger: AGGGCCTGAGGGCTGGCTCCTTCTTCTACCCGGGCGGGAACGTCACCTACCAAGGGGTGGCTGTGACGCGGAGCCGGAAAGAAGGCATCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328313.10
CDS-3UTR CAA 90 bp GGTTATGGGACCGGCTCGCCGGGGGCTCTGGACCTGGGCTGCGAGGCTTATTACATGGGCACGCTGCCGTaGTCCCACCACCTCTGGATG +
Preference number: 5 (lower is better)
Translates to: GYGTGSPGALDLGCEAYYMGTLP*SHHLWM
Trigger: CATCCAGAGGTGGTGGGACAACGGCAGCGTGCCCAT...GTAATAAGCCTCGCAGCCCAGGTCCAGAGCCCCCGGCGAGCCGGTCCCATAACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328313.10
CDS-3UTR CAA 90 bp GCTCGCCGGGGGCTCTGGACCTGGGCTGCGAGGCTTATTACCAGCACCATAACACGGTCTGTGAGGTGGTaGCGCGCGATGCTCTCCCGG +
Preference number: 5 (lower is better)
Translates to: ARRGLWTWAARLITSTITRSVRW*RAMLSR
Trigger: CCGGGAGAGCATCGCGCGCAACCACCTCACAGACCG...TGTTATGGTGCTGGTAATAAGCCTCGCAGCCCAGGTCCAGAGCCCCCGGCGAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000328313.10
CDS-3UTR CAA 90 bp GGGGTTGGCGCTGCCGGGGACAGTGGCATGCAGCCTCTGGCCTGGGATAAGCTGGGAGCAGCATCCCGTTaGGTCCGTAGTCCAGGAGCT +
Preference number: 5 (lower is better)
Translates to: GVGAAGDSGMQPLAWDKLGAASR*VRSPGA
Trigger: AGCTCCTGGACTACGGACCAAACGGGATGCTGCTCC...CAGCTTATCCCAGGCCAGAGGCTGCATGCCACTGTCCCCGGCAGCGCCAACCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328313.10
CDS-3UTR CAA 90 bp GCGAGGCTTATTACCAGCACCATAACAGCCAAGCAGGGGTTGGCGCTGCCGGGGACAGCCAAGCAGGGGTaGGCGCTGCCGGGGACAGTG +
Preference number: 5 (lower is better)
Translates to: ARLITSTITAKQGLALPGTAKQG*ALPGTV
Trigger: CACTGTCCCCGGCAGCGCCAACCCCTGCTTGGCTGT...CCCCGGCAGCGCCAACCCCTGCTTGGCTGTTATGGTGCTGGTAATAAGCCTCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000328313.10
CDS-3UTR CAA 90 bp GCTCGCCGGGGGCTCTGGACCTGGGCTGCGAGGCTTATTACCAGCACCATAACACGTCACAGCCACCCCTaGGTAGGTGACGTTCCCGCC +
Preference number: 5 (lower is better)
Translates to: ARRGLWTWAARLITSTITRHSHP*VGDVPA
Trigger: GGCGGGAACGTCACCTACCAAGGGGTGGCTGTGACG...TGTTATGGTGCTGGTAATAAGCCTCGCAGCCCAGGTCCAGAGCCCCCGGCGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328313.10
CDS-3UTR CAA 90 bp GCAGGGGTTGGCGCTGCCGGGGACAGTGGCATGCAGCCTCTGGCCTGGGATAAGGATGTGATGATCAGGTaGAGGCGGTCTGTGAGGTGG +
Preference number: 5 (lower is better)
Translates to: AGVGAAGDSGMQPLAWDKDVMIR*RRSVRW
Trigger: CCACCTCACAGACCGCCTCAACCTGATCATCACATC...CTTATCCCAGGCCAGAGGCTGCATGCCACTGTCCCCGGCAGCGCCAACCCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328313.10
CDS-3UTR CAA 90 bp CGTGGCTGCAGACGGCAGCGCCGCTTCGGGAGCGGGTTTTGCAGGAGGAGGGGGTTCATGTCCATGTCCTaGTTGTCAAAGCCGTGCTCC +
Preference number: 5 (lower is better)
Translates to: RGCRRQRRFGSGFCRRRGFMSMS*LSKPCS
Trigger: GGAGCACGGCTTTGACAACAAGGACATGGACATGAA...CCCCCTCCTCCTGCAAAACCCGCTCCCGAAGCGGCGCTGCCGTCTGCAGCCACG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328313.10
CDS GCA 90 bp GGAAGAGCAGATTCTGTGTGCAGCATGGGCAGCAGAGTAGCTAGGTaGCCATCGTTGGCCTCGGGCACGATGCCCAGCAGCCGGCACATG +
Preference number: 5 (lower is better)
Translates to: GRADSVCSMGSRVAR*PSLASGTMPSSRHM
Trigger: CATGTGCCGGCTGCTGGGCATCGTGCCCGAGGCCAACGATGGGCACCTAGCTACTCTGCTGCCCATGCTGCACACAGAATCTGCTCTTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328313.10
ENST00000576512.1
CDS CCA 90 bp GGCCACCCTCCCGCCTCTGCCTTCTGGGTCTCTGACCTTGAGCCATaGGGCGTTATGCGACCTCAGACAGAAGAATCACGGTCCCCAGCA +
Preference number: 5 (lower is better)
Translates to: GHPPASAFWVSDLEP*GVMRPQTEESRSPA
Trigger: TGCTGGGGACCGTGATTCTTCTGTCTGAGGTCGCATAACGCCCCATGGCTCAAGGTCAGAGACCCAGAAGGCAGAGGCGGGAGGGTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576512.1
CDS-3UTR CAA 90 bp CACACTGGCCTTCTGTCTCATCCCAAACACGCCGAACCTGTCCCACCGCGGGCCTGGAATCTGTGCACATaGCAGCTTCTCCACCCCGCC +
Preference number: 5 (lower is better)
Translates to: HTGLLSHPKHAEPVPPRAWNLCT*QLLHPA
Trigger: GGCGGGGTGGAGAAGCTGCAATGTGCACAGATTCCA...GGCCCGCGGTGGGACAGGTTCGGCGTGTTTGGGATGAGACAGAAGGCCAGTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576512.1
CDS-3UTR CAA 90 bp GGGGTTGGCGCTGCCGGGGACAGTGGCATGCAGCCTCTGGCCTGGGATAAGCTGTCCCGGAAGGTGAAGTaGGGGAACTTGTGGAATTCA +
Preference number: 5 (lower is better)
Translates to: GVGAAGDSGMQPLAWDKLSRKVK*GNLWNS
Trigger: TGAATTCCACAAGTTCCCCAACTTCACCTTCCGGGA...CAGCTTATCCCAGGCCAGAGGCTGCATGCCACTGTCCCCGGCAGCGCCAACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000328313.10
CDS-3UTR CAA 90 bp TGCTCCCGTTTCTGTCCCCGGCCCAGCAGTGGGAGCCACTCATTTAATCATCAAGCTAGGTGCCCATCGTaGGCCTCGGGCACGATGCCC +
Preference number: 5 (lower is better)
Translates to: CSRFCPRPSSGSHSFNHQARCPS*ASGTMP
Trigger: GGGCATCGTGCCCGAGGCCAACGATGGGCACCTAGC...TTGATGATTAAATGAGTGGCTCCCACTGCTGGGCCGGGGACAGAAACGGGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576512.1
CDS-3UTR CAA 90 bp GGCTCCCCGCTGTGCATCCCACAACCTCCTGCCTTGGGGCTGTGGTCAGCTCCTGTGGCCGTCTCTTCTTaGCCATCACAAGCATCTGAG +
Preference number: 5 (lower is better)
Translates to: GSPLCIPQPPALGLWSAPVAVSS*PSQASE
Trigger: CTCAGATGCTTGTGATGGCAAAGAAGAGACGGCCAC...AGGAGCTGACCACAGCCCCAAGGCAGGAGGTTGTGGGATGCACAGCGGGGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576512.1
CDS-3UTR CAA 90 bp GGTTATGGGACCGGCTCGCCGGGGGCTCTGGACCTGGGCTGCGAGGCTTATTACGTGAAGTTGGGGAACTaGTGGAATTCAACCAGGTCG +
Preference number: 5 (lower is better)
Translates to: GYGTGSPGALDLGCEAYYVKLGN*WNSTRS
Trigger: CGACCTGGTTGAATTCCACAAGTTCCCCAACTTCAC...GTAATAAGCCTCGCAGCCCAGGTCCAGAGCCCCCGGCGAGCCGGTCCCATAACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328313.10
CDS-3UTR CAA 90 bp GACTGTCGCGGCTTGGCCTTTATTCCCATGGGTGCTTTGTGCCGGGGCGGGCCCAAGCCGTGCTCCCCATaGTTGAACTGGACGTTAATT +
Preference number: 5 (lower is better)
Translates to: DCRGLAFIPMGALCRGGPKPCSP*LNWTLI
Trigger: AATTAACGTCCAGTTCAACAATGGGGAGCACGGCTT...GGGCCCGCCCCGGCACAAAGCACCCATGGGAATAAAGGCCAAGCCGCGACAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328313.10
CDS CCA 90 bp ACCTCTGGATGCCCAGCGTGGCGTGGTAGGGCAGCTTCACCTTGCTaGTGGTGTTGTAGTACATGTTGTGAACCACCCCGTGGTTCTCGA +
Preference number: 5 (lower is better)
Translates to: TSGCPAWRGRAASPC*WCCSTCCEPPRGSR
Trigger: TCGAGAACCACGGGGTGGTTCACAACATGTACTACAACACCACCAGCAAGGTGAAGCTGCCCTACCACGCCACGCTGGGCATCCAGAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328313.10
CDS-3UTR CAA 90 bp TGGACTGTCTTGTTCGCTGCATATCCTGAGCCCAGACCAGAGCGTGGCATGGAGGCAGCTCTGTTCTGGTaGCCTAGGACTGTAGCTGGG +
Preference number: 5 (lower is better)
Translates to: WTVLFAAYPEPRPERGMEAALFW*PRTVAG
Trigger: CCCAGCTACAGTCCTAGGCAACCAGAACAGAGCTGC...CTCCATGCCACGCTCTGGTCTGGGCTCAGGATATGCAGCGAACAAGACAGTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576512.1
CDS-3UTR CAA 90 bp AGGTATTTGGAATCTGTGCACATTGCAGCTTCTCCACCCCGCCACTGGAATGTCCCACAACCTCCTGCCTaGGGGCTGTGGTCAGCTCCT +
Preference number: 5 (lower is better)
Translates to: RYLESVHIAASPPRHWNVPQPPA*GLWSAP
Trigger: AGGAGCTGACCACAGCCCCAAGGCAGGAGGTTGTGG...GACATTCCAGTGGCGGGGTGGAGAAGCTGCAATGTGCACAGATTCCAAATACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576512.1
CDS TCA 90 bp CGTTTGGTCCGTAGTCCAGGAGCTCAAACTCGATGTCCCGGAAGGTaGAGTTGGGGAACTTGTGGAATTCAACCAGGTCGCCAGCCCGTT +
Preference number: 5 (lower is better)
Translates to: RLVRSPGAQTRCPGR*SWGTCGIQPGRQPV
Trigger: AACGGGCTGGCGACCTGGTTGAATTCCACAAGTTCCCCAACTTCACCTTCCGGGACATCGAGTTTGAGCTCCTGGACTACGGACCAAACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328313.10
CDS CCA 90 bp TCTGGATGCCCAGCGTGGCGTGGTAGGGCAGCTTCACCTTGCTGGTaGTGTTGTAGTACATGTTGTGAACCACCCCGTGGTTCTCGATAT +
Preference number: 5 (lower is better)
Translates to: SGCPAWRGRAASPCW*CCSTCCEPPRGSRY
Trigger: ATATCGAGAACCACGGGGTGGTTCACAACATGTACTACAACACCACCAGCAAGGTGAAGCTGCCCTACCACGCCACGCTGGGCATCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328313.10
CDS CCA 90 bp AGGAGCTCAAACTCGATGTCCCGGAAGGTGAAGTTGGGGAACTTGTaGAATTCAACCAGGTCGCCAGCCCGTTTGTCCACGGTCGTCATG +
Preference number: 5 (lower is better)
Translates to: RSSNSMSRKVKLGNL*NSTRSPARLSTVVM
Trigger: CATGACGACCGTGGACAAACGGGCTGGCGACCTGGTTGAATTCCACAAGTTCCCCAACTTCACCTTCCGGGACATCGAGTTTGAGCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328313.10
CDS CCA 90 bp GTACACCTTCTCCAGCCTCCCTTCTTTAGGGAGCAGCATCCCGTTTaGTCCGTAGTCCAGGAGCTCAAACTCGATGTCCCGGAAGGTGAA +
Preference number: 5 (lower is better)
Translates to: VHLLQPPFFREQHPV*SVVQELKLDVPEGE
Trigger: TTCACCTTCCGGGACATCGAGTTTGAGCTCCTGGACTACGGACCAAACGGGATGCTGCTCCCTAAAGAAGGGAGGCTGGAGAAGGTGTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328313.10
CDS-3UTR CAA 90 bp CTCTGGACCTGGGCTGCGAGGCTTATTACCAGCACCATAACAGCCAAGCAGGGGCCGTGCTCCCCATTGTaGAACTGGACGTTAATTCTC +
Preference number: 5 (lower is better)
Translates to: LWTWAARLITSTITAKQGPCSPL*NWTLIL
Trigger: GAGAATTAACGTCCAGTTCAACAATGGGGAGCACGG...CCCCTGCTTGGCTGTTATGGTGCTGGTAATAAGCCTCGCAGCCCAGGTCCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000328313.10
CDS-3UTR CAA 90 bp CTCCTCCCAAATGCACCGCAGGTGACGGTTTCCGAGCTATCCCAGTGGAGCACACCGTGCTCCCCATTGTaGAACTGGACGTTAATTCTC +
Preference number: 5 (lower is better)
Translates to: LLPNAPQVTVSELSQWSTPCSPL*NWTLIL
Trigger: GAGAATTAACGTCCAGTTCAACAATGGGGAGCACGG...TGTGCTCCACTGGGATAGCTCGGAAACCGTCACCTGCGGTGCATTTGGGAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576512.1
CDS-3UTR CAA 90 bp CCTCGCTCTGTGCCAACCTGCAGGCACACTGGCCTTCTGTCTCATCCCAAACACTTCATGTCCATGTCCTaGTTGTCAAAGCCGTGCTCC +
Preference number: 5 (lower is better)
Translates to: PRSVPTCRHTGLLSHPKHFMSMS*LSKPCS
Trigger: GGAGCACGGCTTTGACAACAAGGACATGGACATGAA...GTGTTTGGGATGAGACAGAAGGCCAGTGTGCCTGCAGGTTGGCACAGAGCGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576512.1
CDS-3UTR CAA 90 bp GGGAGCCACTCATTTAATCATCAACCTCAGACCCTGTGTAACCTCAGCTTGGGGTCTGGGTCTCTGACCTaGAGCCATGGGGCGTTATGC +
Preference number: 5 (lower is better)
Translates to: GSHSFNHQPQTLCNLSLGSGSLT*SHGALC
Trigger: GCATAACGCCCCATGGCTCAAGGTCAGAGACCCAGA...CCCCAAGCTGAGGTTACACAGGGTCTGAGGTTGATGATTAAATGAGTGGCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576512.1
CDS-3UTR CAA 90 bp GGTCCGGGTGGTCTGCTCTGGAAAGACCTCCTCCAAGCCCAGAGCAGAGAGGCTTGTGCGTGGATTCATTaGCTTTTGTGTTCTCTGCTT +
Preference number: 5 (lower is better)
Translates to: GPGGLLWKDLLQAQSREACAWIH*LLCSLL
Trigger: AAGCAGAGAACACAAAAGCAAATGAATCCACGCACA...AGCCTCTCTGCTCTGGGCTTGGAGGAGGTCTTTCCAGAGCAGACCACCCGGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576512.1
CDS-3UTR CAA 90 bp TGTCCCTGGCTCTTTCCCCTGCCTGGTGTGTCTGGCTTCTTCTGGTGTGTCTGTAAGCCGTGCTCCCCATaGTTGAACTGGACGTTAATT +
Preference number: 5 (lower is better)
Translates to: CPWLFPLPGVSGFFWCVCKPCSP*LNWTLI
Trigger: AATTAACGTCCAGTTCAACAATGGGGAGCACGGCTT...ACAGACACACCAGAAGAAGCCAGACACACCAGGCAGGGGAAAGAGCCAGGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576512.1
CDS-3UTR CAA 90 bp GGGAGCCACTCATTTAATCATCAACCTCAGACCCTGTGTAACCTCAGCTTGGGGAGGTCCTGGACTGTCTaGTTCGCTGCATATCCTGAG +
Preference number: 5 (lower is better)
Translates to: GSHSFNHQPQTLCNLSLGRSWTV*FAAYPE
Trigger: CTCAGGATATGCAGCGAACAAGACAGTCCAGGACCT...CCCCAAGCTGAGGTTACACAGGGTCTGAGGTTGATGATTAAATGAGTGGCTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576512.1
CDS-3UTR CAA 90 bp CCTCGCTCTGTGCCAACCTGCAGGCACACTGGCCTTCTGTCTCATCCCAAACACACCCATCTTTCATTTTaGCATTTTCTTCACCCTCCC +
Preference number: 5 (lower is better)
Translates to: PRSVPTCRHTGLLSHPKHTHLSF*HFLHPP
Trigger: GGGAGGGTGAAGAAAATGCAAAAATGAAAGATGGGT...GTGTTTGGGATGAGACAGAAGGCCAGTGTGCCTGCAGGTTGGCACAGAGCGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576512.1
CDS GCA 90 bp GCGCGGAAGATGGTCTTCATGTCCATGTCCTTGTTGTCAAAGCCGTaGTCCCCATTGTTGAACTGGACGTTAATTCTCCCATGGATGACG +
Preference number: 5 (lower is better)
Translates to: ARKMVFMSMSLLSKP*SPLLNWTLILPWMT
Trigger: CGTCATCCATGGGAGAATTAACGTCCAGTTCAACAATGGGGAGCACGGCTTTGACAACAAGGACATGGACATGAAGACCATCTTCCGCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328313.10
ENST00000576512.1
CDS TCA 72 bp CTTTCCGGCTCCGCGTCACAGCCACCCCTTGGTAGGTaGCGTTCCCGCCCGGGTAGAAGAAGGAGCCAGCCC +
Preference number: 6 (lower is better)
Translates to: LSGSASQPPLGR*RSRPGRRRSQP
Trigger: GGGCTGGCTCCTTCTTCTACCCGGGCGGGAACGTCACCTACCAAGGGGTGGCTGTGACGCGGAGCCGGAAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328313.10
CDS GCA 72 bp TCACGGTCCCCAGCAGTCCCATCACGAGGAGGGGCCTaGTGCTGGGCGGGAGAGCAGATCTTCCCTTGGGCA +
Preference number: 6 (lower is better)
Translates to: SRSPAVPSRGGA*CWAGEQIFPWA
Trigger: TGCCCAAGGGAAGATCTGCTCTCCCGCCCAGCAGCAGGCCCCTCCTCGTGATGGGACTGCTGGGGACCGTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000328313.10
ENST00000576512.1
CDS CCA 72 bp ACGATGCCCAGCAGCCGGCACATGAGCTCGTACACGTaGACGCTCTCAAAGGGCTCCACCTCCAGGCCCGCC +
Preference number: 6 (lower is better)
Translates to: TMPSSRHMSSYT*TLSKGSTSRPA
Trigger: GGCGGGCCTGGAGGTGGAGCCCTTTGAGAGCGTCCACGTGTACGAGCTCATGTGCCGGCTGCTGGGCATCGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328313.10
ENST00000576512.1
CDS CAA 72 bp TGCCTCTGGGCTGTGATCCAGATGGGCACGCTGCCGTaGTCCCACCACCTCTGGATGCCCAGCGTGGCGTGG +
Preference number: 6 (lower is better)
Translates to: CLWAVIQMGTLP*SHHLWMPSVAW
Trigger: CCACGCCACGCTGGGCATCCAGAGGTGGTGGGACAACGGCAGCGTGCCCATCTGGATCACAGCCCAGAGGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328313.10
CDS CCA 72 bp CGCTGCCGTTGTCCCACCACCTCTGGATGCCCAGCGTaGCGTGGTAGGGCAGCTTCACCTTGCTGGTGGTGT +
Preference number: 6 (lower is better)
Translates to: RCRCPTTSGCPA*RGRAASPCWWC
Trigger: ACACCACCAGCAAGGTGAAGCTGCCCTACCACGCCACGCTGGGCATCCAGAGGTGGTGGGACAACGGCAGCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328313.10
CDS CAA 72 bp TGCAGCATGGGCAGCAGAGTAGCTAGGTGCCCATCGTaGGCCTCGGGCACGATGCCCAGCAGCCGGCACATG +
Preference number: 6 (lower is better)
Translates to: CSMGSRVARCPS*ASGTMPSSRHM
Trigger: CATGTGCCGGCTGCTGGGCATCGTGCCCGAGGCCAACGATGGGCACCTAGCTACTCTGCTGCCCATGCTGCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328313.10
ENST00000576512.1
CDS CAA 90 bp GTTGTGTGCGATGCCTTCTTTCCGGCTCCGCGTCACAGCCACCCCTaGGTAGGTGACGTTCCCGCCCGGGTAGAAGAAGGAGCCAGCCCT +
Preference number: 6 (lower is better)
Translates to: VVCDAFFPAPRHSHP*VGDVPARVEEGASP
Trigger: AGGGCTGGCTCCTTCTTCTACCCGGGCGGGAACGTCACCTACCAAGGGGTGGCTGTGACGCGGAGCCGGAAAGAAGGCATCGCACACAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328313.10
CDS CAA 90 bp GATTCTGTGTGCAGCATGGGCAGCAGAGTAGCTAGGTGCCCATCGTaGGCCTCGGGCACGATGCCCAGCAGCCGGCACATGAGCTCGTAC +
Preference number: 6 (lower is better)
Translates to: DSVCSMGSRVARCPS*ASGTMPSSRHMSSY
Trigger: GTACGAGCTCATGTGCCGGCTGCTGGGCATCGTGCCCGAGGCCAACGATGGGCACCTAGCTACTCTGCTGCCCATGCTGCACACAGAATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000328313.10
ENST00000576512.1
CDS CAA 72 bp GATGCCTTCTTTCCGGCTCCGCGTCACAGCCACCCCTaGGTAGGTGACGTTCCCGCCCGGGTAGAAGAAGGA +
Preference number: 6 (lower is better)
Translates to: DAFFPAPRHSHP*VGDVPARVEEG
Trigger: TCCTTCTTCTACCCGGGCGGGAACGTCACCTACCAAGGGGTGGCTGTGACGCGGAGCCGGAAAGAAGGCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328313.10
CDS CCA 72 bp CCCGCCTCTGCCTTCTGGGTCTCTGACCTTGAGCCATaGGGCGTTATGCGACCTCAGACAGAAGAATCACGG +
Preference number: 6 (lower is better)
Translates to: PASAFWVSDLEP*GVMRPQTEESR
Trigger: CCGTGATTCTTCTGTCTGAGGTCGCATAACGCCCCATGGCTCAAGGTCAGAGACCCAGAAGGCAGAGGCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576512.1
CDS CCA 72 bp CCAGCGTGGCGTGGTAGGGCAGCTTCACCTTGCTGGTaGTGTTGTAGTACATGTTGTGAACCACCCCGTGGT +
Preference number: 6 (lower is better)
Translates to: PAWRGRAASPCW*CCSTCCEPPRG
Trigger: ACCACGGGGTGGTTCACAACATGTACTACAACACCACCAGCAAGGTGAAGCTGCCCTACCACGCCACGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328313.10
CDS CCA 72 bp TGCCCAGCGTGGCGTGGTAGGGCAGCTTCACCTTGCTaGTGGTGTTGTAGTACATGTTGTGAACCACCCCGT +
Preference number: 6 (lower is better)
Translates to: CPAWRGRAASPC*WCCSTCCEPPR
Trigger: ACGGGGTGGTTCACAACATGTACTACAACACCACCAGCAAGGTGAAGCTGCCCTACCACGCCACGCTGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328313.10
CDS CCA 72 bp CTCCAGCCTCCCTTCTTTAGGGAGCAGCATCCCGTTTaGTCCGTAGTCCAGGAGCTCAAACTCGATGTCCCG +
Preference number: 6 (lower is better)
Translates to: LQPPFFREQHPV*SVVQELKLDVP
Trigger: CGGGACATCGAGTTTGAGCTCCTGGACTACGGACCAAACGGGATGCTGCTCCCTAAAGAAGGGAGGCTGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328313.10
CDS CAA 72 bp GGGAACTTGTGGAATTCAACCAGGTCGCCAGCCCGTTaGTCCACGGTCGTCATGCCGTGGTCGGATGTGATG +
Preference number: 6 (lower is better)
Translates to: GNLWNSTRSPAR*STVVMPWSDVM
Trigger: CATCACATCCGACCACGGCATGACGACCGTGGACAAACGGGCTGGCGACCTGGTTGAATTCCACAAGTTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000328313.10
CDS CAA 90 bp TCCAGGAGCTCAAACTCGATGTCCCGGAAGGTGAAGTTGGGGAACTaGTGGAATTCAACCAGGTCGCCAGCCCGTTTGTCCACGGTCGTC +
Preference number: 6 (lower is better)
Translates to: SRSSNSMSRKVKLGN*WNSTRSPARLSTVV
Trigger: GACGACCGTGGACAAACGGGCTGGCGACCTGGTTGAATTCCACAAGTTCCCCAACTTCACCTTCCGGGACATCGAGTTTGAGCTCCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328313.10
CDS CAA 90 bp GTGAAGTTGGGGAACTTGTGGAATTCAACCAGGTCGCCAGCCCGTTaGTCCACGGTCGTCATGCCGTGGTCGGATGTGATGATCAGGTTG +
Preference number: 6 (lower is better)
Translates to: VKLGNLWNSTRSPAR*STVVMPWSDVMIRL
Trigger: CAACCTGATCATCACATCCGACCACGGCATGACGACCGTGGACAAACGGGCTGGCGACCTGGTTGAATTCCACAAGTTCCCCAACTTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328313.10
CDS GCA 72 bp CTCTCCACTCCGTCTCATTTTTGTAGTTGTGTGCGATaGCTTCTTTCCGGCTCCGCGTCACAGCCACCCCTT +
Preference number: 6 (lower is better)
Translates to: LSTPSHFCSCVR*LLSGSASQPPL
Trigger: AAGGGGTGGCTGTGACGCGGAGCCGGAAAGAAGGCATCGCACACAACTACAAAAATGAGACGGAGTGGAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000328313.10
CDS CCA 72 bp AACTCGATGTCCCGGAAGGTGAAGTTGGGGAACTTGTaGAATTCAACCAGGTCGCCAGCCCGTTTGTCCACG +
Preference number: 6 (lower is better)
Translates to: NSMSRKVKLGNL*NSTRSPARLST
Trigger: CGTGGACAAACGGGCTGGCGACCTGGTTGAATTCCACAAGTTCCCCAACTTCACCTTCCGGGACATCGAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328313.10
CDS CAA 72 bp TCCAGGAGCTCAAACTCGATGTCCCGGAAGGTGAAGTaGGGGAACTTGTGGAATTCAACCAGGTCGCCAGCC +
Preference number: 6 (lower is better)
Translates to: SRSSNSMSRKVK*GNLWNSTRSPA
Trigger: GGCTGGCGACCTGGTTGAATTCCACAAGTTCCCCAACTTCACCTTCCGGGACATCGAGTTTGAGCTCCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328313.10
CDS TCA 72 bp CGTAGTCCAGGAGCTCAAACTCGATGTCCCGGAAGGTaGAGTTGGGGAACTTGTGGAATTCAACCAGGTCGC +
Preference number: 6 (lower is better)
Translates to: RSPGAQTRCPGR*SWGTCGIQPGR
Trigger: GCGACCTGGTTGAATTCCACAAGTTCCCCAACTTCACCTTCCGGGACATCGAGTTTGAGCTCCTGGACTACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328313.10
CDS CAA 72 bp TCAAACTCGATGTCCCGGAAGGTGAAGTTGGGGAACTaGTGGAATTCAACCAGGTCGCCAGCCCGTTTGTCC +
Preference number: 6 (lower is better)
Translates to: SNSMSRKVKLGN*WNSTRSPARLS
Trigger: GGACAAACGGGCTGGCGACCTGGTTGAATTCCACAAGTTCCCCAACTTCACCTTCCGGGACATCGAGTTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000328313.10
CDS CAA 72 bp CCCACAGCGCGGAAGATGGTCTTCATGTCCATGTCCTaGTTGTCAAAGCCGTGCTCCCCATTGTTGAACTGG +
Preference number: 6 (lower is better)
Translates to: PTARKMVFMSMS*LSKPCSPLLNW
Trigger: CCAGTTCAACAATGGGGAGCACGGCTTTGACAACAAGGACATGGACATGAAGACCATCTTCCGCGCTGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328313.10
ENST00000576512.1
CDS CAA 72 bp ACAGCGCGGAAGATGGTCTTCATGTCCATGTCCTTGTaGTCAAAGCCGTGCTCCCCATTGTTGAACTGGACG +
Preference number: 6 (lower is better)
Translates to: TARKMVFMSMSL*SKPCSPLLNWT
Trigger: CGTCCAGTTCAACAATGGGGAGCACGGCTTTGACAACAAGGACATGGACATGAAGACCATCTTCCGCGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328313.10
ENST00000576512.1
CDS CAA 90 bp CTAGGGCCCACAGCGCGGAAGATGGTCTTCATGTCCATGTCCTTGTaGTCAAAGCCGTGCTCCCCATTGTTGAACTGGACGTTAATTCTC +
Preference number: 6 (lower is better)
Translates to: LGPTARKMVFMSMSL*SKPCSPLLNWTLIL
Trigger: GAGAATTAACGTCCAGTTCAACAATGGGGAGCACGGCTTTGACAACAAGGACATGGACATGAAGACCATCTTCCGCGCTGTGGGCCCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328313.10
ENST00000576512.1
CDS CAA 90 bp AAGCTAGGGCCCACAGCGCGGAAGATGGTCTTCATGTCCATGTCCTaGTTGTCAAAGCCGTGCTCCCCATTGTTGAACTGGACGTTAATT +
Preference number: 6 (lower is better)
Translates to: KLGPTARKMVFMSMS*LSKPCSPLLNWTLI
Trigger: AATTAACGTCCAGTTCAACAATGGGGAGCACGGCTTTGACAACAAGGACATGGACATGAAGACCATCTTCCGCGCTGTGGGCCCTAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328313.10
ENST00000576512.1
CDS CAA 72 bp ATGTCCATGTCCTTGTTGTCAAAGCCGTGCTCCCCATaGTTGAACTGGACGTTAATTCTCCCATGGATGACG +
Preference number: 6 (lower is better)
Translates to: MSMSLLSKPCSP*LNWTLILPWMT
Trigger: CGTCATCCATGGGAGAATTAACGTCCAGTTCAACAATGGGGAGCACGGCTTTGACAACAAGGACATGGACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328313.10
ENST00000576512.1
CDS GCA 72 bp ATGGTCTTCATGTCCATGTCCTTGTTGTCAAAGCCGTaGTCCCCATTGTTGAACTGGACGTTAATTCTCCCA +
Preference number: 6 (lower is better)
Translates to: MVFMSMSLLSKP*SPLLNWTLILP
Trigger: TGGGAGAATTAACGTCCAGTTCAACAATGGGGAGCACGGCTTTGACAACAAGGACATGGACATGAAGACCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000328313.10
ENST00000576512.1