RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ENPP2 (Homo sapiens)

Ensembl gene IDs: ENSG00000136960

Ensembl transcript IDs: ENST00000075322.11, ENST00000259486.10, ENST00000427067.6, ENST00000518109.1, ENST00000518958.1, ENST00000520066.5, ENST00000522167.5, ENST00000522826.5, ENST00000523861.1

Found 452 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TGCCTTTCTTCATGTATGATGCACGGAAGCCATCCACGGAGAAGATaGTTAATGGAGGGCGAACAAACCTGTTATTATTCATTGGTAGCT +
Preference number: 1 (lower is better)
Translates to: CLSSCMMHGSHPRRR*LMEGEQTCYYSLVA
Trigger: AGCTACCAATGAATAATAACAGGTTTGTTCGCCCTCCATTAATCATCTTCTCCGTGGATGGCTTCCGTGCATCATACATGAAGAAAGGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518958.1
3UTR CCA 90 bp TCAGTGTTTCCATACAGTACAGGACTAAATGTGGCAACTGTGCATTaGAAAATTAATATTTCCTCAATGCAAATATCAAATCTGCAGCAC +
Preference number: 1 (lower is better)
Translates to: SVFPYSTGLNVATVH*KINISSMQISNLQH
Trigger: GTGCTGCAGATTTGATATTTGCATTGAGGAAATATTAATTTTCCAATGCACAGTTGCCACATTTAGTCCTGTACTGTATGGAAACACTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
3UTR-3UTR TCA 90 bp ATGATTAAATTTCTCTCGCCCTCGCAGATGAAAAGTGGCATCAAATACAGGATCCATCCACGGAGAAGATaGTTAATGGAGGGCGAACAA +
Preference number: 2 (lower is better)
Translates to: MIKFLSPSQMKSGIKYRIHPRRR*LMEGEQ
Trigger: TTGTTCGCCCTCCATTAATCATCTTCTCCGTGGATG...GATCCTGTATTTGATGCCACTTTTCATCTGCGAGGGCGAGAGAAATTTAATCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518958.1
3UTR-3UTR TCA 90 bp TGTGATTCTGGATATAGCCCAGTGGCCAAAGTGTATAAGTTAGGAAAGGTTTTAGCCTTTCTTCATGTATaGTGCACGGAAGCCATCCAC +
Preference number: 2 (lower is better)
Translates to: CDSGYSPVAKVYKLGKVLAFLHV*CTEAIH
Trigger: GTGGATGGCTTCCGTGCATCATACATGAAGAAAGGC...TAAAACCTTTCCTAACTTATACACTTTGGCCACTGGGCTATATCCAGAATCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518958.1
3UTR TCA 72 bp TCATGTATGATGCACGGAAGCCATCCACGGAGAAGATaGTTAATGGAGGGCGAACAAACCTGTTATTATTCA +
Preference number: 3 (lower is better)
Translates to: SCMMHGSHPRRR*LMEGEQTCYYS
Trigger: TGAATAATAACAGGTTTGTTCGCCCTCCATTAATCATCTTCTCCGTGGATGGCTTCCGTGCATCATACATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518958.1
CDS-3UTR GCA 90 bp CTGCAGTATTTATTACAAGCTCTACTCAGAACACAAGGCTACCTAAATCAAGCACTCGGCGTCTGTTCCTaGCCGGGCGCTGCGGACGCG +
Preference number: 4 (lower is better)
Translates to: LQYLLQALLRTQGYLNQALGVCS*PGAADA
Trigger: CGCGTCCGCAGCGCCCGGGCAGGAACAGACGCCGAG...TGCTTGATTTAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAATAAATACTGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427067.6
CDS-3UTR GCA 90 bp AGGCAACTTTACAAAATCAGTGTTTCCATACAGTACAGGACTAAATGTGGCAACGCGACCTGGGAGCTGTaGTCGGGACGGCTGCTGCGG +
Preference number: 4 (lower is better)
Translates to: RQLYKISVSIQYRTKCGNATWEL*SGRLLR
Trigger: CCGCAGCAGCCGTCCCGAGCACAGCTCCCAGGTCGC...GTTGCCACATTTAGTCCTGTACTGTATGGAAACACTGATTTTGTAAAGTTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427067.6
CDS-3UTR GCA 90 bp ATATCAAATCTGCAGCACCATTTAGAAGCTTCCACTAAAAACTCAAGCTGCAGTCGGCGTGGCGGGTCATaGTGCGGGAGTCTCGGCGTC +
Preference number: 4 (lower is better)
Translates to: ISNLQHHLEASTKNSSCSRRGGS*CGSLGV
Trigger: GACGCCGAGACTCCCGCAGCATGACCCGCCACGCCG...ACTGCAGCTTGAGTTTTTAGTGGAAGCTTCTAAATGGTGCTGCAGATTTGATAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427067.6
CDS-3UTR CCA 90 bp AAACTCAAGCTGCAGTATTTATTACAAGCTCTACTCAGAACACAAGGCTACCTATGCAGCCCCGCGACCTaGGAGCTGTGCTCGGGACGG +
Preference number: 4 (lower is better)
Translates to: KLKLQYLLQALLRTQGYLCSPAT*ELCSGR
Trigger: CCGTCCCGAGCACAGCTCCCAGGTCGCGGGGCTGCA...TAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAATAAATACTGCAGCTTGAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427067.6
CDS-3UTR GCA 90 bp GTTAGGAAAGGTTTTAGTTGGGTACACCGGCCTCATGTAGGGAGAGTGTGTGCCGAAGTTCAAAGCACCTaGCCTTGCAAGATCCGGAGA +
Preference number: 4 (lower is better)
Translates to: VRKGFSWVHRPHVGRVCAEVQST*PCKIRR
Trigger: TCTCCGGATCTTGCAAGGGCAGGTGCTTTGAACTTC...GGCACACACTCTCCCTACATGAGGCCGGTGTACCCAACTAAAACCTTTCCTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518958.1
CDS-3UTR TCA 90 bp GGCATGACTTTGCTGCCTTTCTTCATGTATGATGCACGGAAGCCATCCACGGAGCATCCACGGAGAAGATaGTTAATGGAGGGCGAACAA +
Preference number: 4 (lower is better)
Translates to: GMTLLPFFMYDARKPSTEHPRRR*LMEGEQ
Trigger: TTGTTCGCCCTCCATTAATCATCTTCTCCGTGGATG...CTCCGTGGATGGCTTCCGTGCATCATACATGAAGAAAGGCAGCAAAGTCATGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518958.1
CDS-3UTR GCA 90 bp ATGACTTTGCTGCCTTTCTTCATGTATGATGCACGGAAGCCATCCACGGAGAAGCAAAGCACCTGCCCTTaGAAGATCCGGAGATGTTGG +
Preference number: 4 (lower is better)
Translates to: MTLLPFFMYDARKPSTEKQSTCP*KIRRCW
Trigger: CCAACATCTCCGGATCTTGCAAGGGCAGGTGCTTTG...CTTCTCCGTGGATGGCTTCCGTGCATCATACATGAAGAAAGGCAGCAAAGTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518958.1
CDS-3UTR CCA 90 bp GTTAGGAAAGGTTTTAGTTGGGTACACCGGCCTCATGTAGGGAGAGTGTGTGCCATGCTTTTGTTCTTATaGGCCTCCTGCAGGGCATTC +
Preference number: 4 (lower is better)
Translates to: VRKGFSWVHRPHVGRVCAMLLFL*ASCRAF
Trigger: GAATGCCCTGCAGGAGGCCCATAAGAACAAAAGCAT...GGCACACACTCTCCCTACATGAGGCCGGTGTACCCAACTAAAACCTTTCCTAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518958.1
CDS-3UTR TCA 90 bp AGCCCAGTGGCCAAAGTGTATAAGTTAGGAAAGGTTTTAGTTGGGTACACCGGCGCCTTTCTTCATGTATaGTGCACGGAAGCCATCCAC +
Preference number: 4 (lower is better)
Translates to: SPVAKVYKLGKVLVGYTGAFLHV*CTEAIH
Trigger: GTGGATGGCTTCCGTGCATCATACATGAAGAAAGGC...GCCGGTGTACCCAACTAAAACCTTTCCTAACTTATACACTTTGGCCACTGGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518958.1
CDS-3UTR GCA 90 bp GATGCACGGAAGCCATCCACGGAGAAGATGATTAATGGAGGGCGAACAAACCTGTTCCTCCCATCCTTCTaGTCTCTTAATTCGATGTGC +
Preference number: 4 (lower is better)
Translates to: DARKPSTEKMINGGRTNLFLPSF*SLNSMC
Trigger: GCACATCGAATTAAGAGAGCAGAAGGATGGGAGGAA...CAGGTTTGTTCGCCCTCCATTAATCATCTTCTCCGTGGATGGCTTCCGTGCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518958.1
CDS-3UTR GCA 90 bp GTTAGGAAAGGTTTTAGTTGGGTACACCGGCCTCATGTAGGGAGAGTGTGTGCCTCATCATCAACCCAATaGGACTCTCCTTTGCAAACC +
Preference number: 4 (lower is better)
Translates to: VRKGFSWVHRPHVGRVCASSSTQ*DSPLQT
Trigger: GGTTTGCAAAGGAGAGTCGCATTGGGTTGATGATGA...GGCACACACTCTCCCTACATGAGGCCGGTGTACCCAACTAAAACCTTTCCTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518958.1
CDS-3UTR GCA 90 bp GCTGCAGTATTTATTACAAGCTCTACTCAGAACACAAGGCTACCTAAATCAAGCGCTCGGGACGGCTGCTaGGGACTGCTCTTGTTTGCA +
Preference number: 4 (lower is better)
Translates to: AAVFITSSTQNTRLPKSSARDGC*GLLLFA
Trigger: TGCAAACAAGAGCAGTCCGCAGCAGCCGTCCCGAGC...GCTTGATTTAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAATAAATACTGCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427067.6
CDS-3UTR GCA 90 bp ACTAAAAACTCAAGCTGCAGTATTTATTACAAGCTCTACTCAGAACACAAGGCTCGTGGCGGGTCATGCTaGGGGAGTCTCGGCGTCTGT +
Preference number: 4 (lower is better)
Translates to: TKNSSCSIYYKLYSEHKARGGSC*GSLGVC
Trigger: ACAGACGCCGAGACTCCCGCAGCATGACCCGCCACG...AGCCTTGTGTTCTGAGTAGAGCTTGTAATAAATACTGCAGCTTGAGTTTTTAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427067.6
CDS-3UTR GCA 90 bp AGCCCAGTGGCCAAAGTGTATAAGTTAGGAAAGGTTTTAGTTGGGTACACCGGCTCCTGCAGGGCATTCTaGGGCCTTTATTTCCTCACA +
Preference number: 4 (lower is better)
Translates to: SPVAKVYKLGKVLVGYTGSCRAF*GLYFLT
Trigger: TGTGAGGAAATAAAGGCCGCAGAATGCCCTGCAGGA...GCCGGTGTACCCAACTAAAACCTTTCCTAACTTATACACTTTGGCCACTGGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518958.1
CDS-3UTR TCA 90 bp AGGCAACTTTACAAAATCAGTGTTTCCATACAGTACAGGACTAAATGTGGCAACACCGAAGGCCTCTCATaGTCTGGCAGGGTGAGCCAC +
Preference number: 4 (lower is better)
Translates to: RQLYKISVSIQYRTKCGNTEGLS*SGRVSH
Trigger: GTGGCTCACCCTGCCAGATCATGAGAGGCCTTCGGT...GTTGCCACATTTAGTCCTGTACTGTATGGAAACACTGATTTTGTAAAGTTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR TCA 90 bp CTGCAGTATTTATTACAAGCTCTACTCAGAACACAAGGCTACCTAAATCAAGCAACCGAAGGCCTCTCATaGTCTGGCAGGGTGAGCCAC +
Preference number: 4 (lower is better)
Translates to: LQYLLQALLRTQGYLNQATEGLS*SGRVSH
Trigger: GTGGCTCACCCTGCCAGATCATGAGAGGCCTTCGGT...TGCTTGATTTAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAATAAATACTGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR TCA 90 bp AAACTCAAGCTGCAGTATTTATTACAAGCTCTACTCAGAACACAAGGCTACCTAACCGAAGGCCTCTCATaGTCTGGCAGGGTGAGCCAC +
Preference number: 4 (lower is better)
Translates to: KLKLQYLLQALLRTQGYLTEGLS*SGRVSH
Trigger: GTGGCTCACCCTGCCAGATCATGAGAGGCCTTCGGT...TAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAATAAATACTGCAGCTTGAGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR TCA 90 bp ATATCAAATCTGCAGCACCATTTAGAAGCTTCCACTAAAAACTCAAGCTGCAGTGCCGGTGAGGCAGGATaGAGGAGGACACAGAGAGAG +
Preference number: 4 (lower is better)
Translates to: ISNLQHHLEASTKNSSCSAGEAG*RRTQRE
Trigger: CTCTCTCTGTGTCCTCCTTCATCCTGCCTCACCGGC...ACTGCAGCTTGAGTTTTTAGTGGAAGCTTCTAAATGGTGCTGCAGATTTGATAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR TCA 90 bp CTCAAGCTGCAGTATTTATTACAAGCTCTACTCAGAACACAAGGCTACCTAAATTCGTTGTCAGGCCGGTaGGGCAGGATGAAGGAGGAC +
Preference number: 4 (lower is better)
Translates to: LKLQYLLQALLRTQGYLNSLSGR*GRMKED
Trigger: GTCCTCCTTCATCCTGCCTCACCGGCCTGACAACGA...ATTTAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAATAAATACTGCAGCTTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR GCA 90 bp GATGCACGGAAGCCATCCACGGAGAAGATGATTAATGGAGGGCGAACAAACCTGTGTAGGGAGAGTGTGTaGCACAAGACCTTAGTTTTT +
Preference number: 4 (lower is better)
Translates to: DARKPSTEKMINGGRTNLCRESV*HKTLVF
Trigger: AAAAACTAAGGTCTTGTGGCACACACTCTCCCTACA...CAGGTTTGTTCGCCCTCCATTAATCATCTTCTCCGTGGATGGCTTCCGTGCATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518958.1
CDS-3UTR GCA 90 bp CTGCAGTATTTATTACAAGCTCTACTCAGAACACAAGGCTACCTAAATCAAGCAACGGCTGCTGCGGACTaGTCTTGTTTGCACTGGCCG +
Preference number: 4 (lower is better)
Translates to: LQYLLQALLRTQGYLNQATAAAD*SCLHWP
Trigger: CGGCCAGTGCAAACAAGAGCAGTCCGCAGCAGCCGT...TGCTTGATTTAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAATAAATACTGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427067.6
CDS-3UTR CCA 90 bp ATGATTAAATTTCTCTCGCCCTCGCAGATGAAAAGTGGCATCAAATACAGGATCTACAGCAGTCTCCCCTaGCCAAGCAGTCCTCTGAGC +
Preference number: 4 (lower is better)
Translates to: MIKFLSPSQMKSGIKYRIYSSLP*PSSPLS
Trigger: GCTCAGAGGACTGCTTGGCCAGGGGAGACTGCTGTA...GATCCTGTATTTGATGCCACTTTTCATCTGCGAGGGCGAGAGAAATTTAATCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518958.1
CDS-3UTR CCA 90 bp CTCAAGCTGCAGTATTTATTACAAGCTCTACTCAGAACACAAGGCTACCTAAATCAGGCCGGACGCAACTaGTCAGATGGTCAGGAACGC +
Preference number: 4 (lower is better)
Translates to: LKLQYLLQALLRTQGYLNQAGRN*SDGQER
Trigger: GCGTTCCTGACCATCTGACCAGTTGCGTCCGGCCTG...ATTTAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAATAAATACTGCAGCTTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CCA 90 bp ATATCAAATCTGCAGCACCATTTAGAAGCTTCCACTAAAAACTCAAGCTGCAGTCAGGCCGGACGCAACTaGTCAGATGGTCAGGAACGC +
Preference number: 4 (lower is better)
Translates to: ISNLQHHLEASTKNSSCSQAGRN*SDGQER
Trigger: GCGTTCCTGACCATCTGACCAGTTGCGTCCGGCCTG...ACTGCAGCTTGAGTTTTTAGTGGAAGCTTCTAAATGGTGCTGCAGATTTGATAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CCA 90 bp CTGCAGTATTTATTACAAGCTCTACTCAGAACACAAGGCTACCTAAATCAAGCACAGGCCGGACGCAACTaGTCAGATGGTCAGGAACGC +
Preference number: 4 (lower is better)
Translates to: LQYLLQALLRTQGYLNQAQAGRN*SDGQER
Trigger: GCGTTCCTGACCATCTGACCAGTTGCGTCCGGCCTG...TGCTTGATTTAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAATAAATACTGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR TCA 90 bp ATGACTTTGCTGCCTTTCTTCATGTATGATGCACGGAAGCCATCCACGGAGAAGCTCCAACGGCAAAAGTaGACAGGGATATTATCTGAC +
Preference number: 4 (lower is better)
Translates to: MTLLPFFMYDARKPSTEKLQRQK*TGILSD
Trigger: GTCAGATAATATCCCTGTTCACTTTTGCCGTTGGAG...CTTCTCCGTGGATGGCTTCCGTGCATCATACATGAAGAAAGGCAGCAAAGTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518958.1
CDS-3UTR TCA 90 bp CTCAAGCTGCAGTATTTATTACAAGCTCTACTCAGAACACAAGGCTACCTAAATGGAGGTCCAGCCTCTTaGAGTTCAAAGCACCTGCCC +
Preference number: 4 (lower is better)
Translates to: LKLQYLLQALLRTQGYLNGGPAS*SSKHLP
Trigger: GGGCAGGTGCTTTGAACTTCAAGAGGCTGGACCTCC...ATTTAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAATAAATACTGCAGCTTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR TCA 90 bp ACTAAAAACTCAAGCTGCAGTATTTATTACAAGCTCTACTCAGAACACAAGGCTGCCGGTGAGGCAGGATaGAGGAGGACACAGAGAGAG +
Preference number: 4 (lower is better)
Translates to: TKNSSCSIYYKLYSEHKAAGEAG*RRTQRE
Trigger: CTCTCTCTGTGTCCTCCTTCATCCTGCCTCACCGGC...AGCCTTGTGTTCTGAGTAGAGCTTGTAATAAATACTGCAGCTTGAGTTTTTAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR TCA 90 bp AATCTGCAGCACCATTTAGAAGCTTCCACTAAAAACTCAAGCTGCAGTATTTATTCGTTGTCAGGCCGGTaGGGCAGGATGAAGGAGGAC +
Preference number: 4 (lower is better)
Translates to: NLQHHLEASTKNSSCSIYSLSGR*GRMKED
Trigger: GTCCTCCTTCATCCTGCCTCACCGGCCTGACAACGA...ATAAATACTGCAGCTTGAGTTTTTAGTGGAAGCTTCTAAATGGTGCTGCAGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR GCA 90 bp CTGCAGTATTTATTACAAGCTCTACTCAGAACACAAGGCTACCTAAATCAAGCAAGGGCGAACAAACCCTaGAGGGCATTCTGCGGCCTT +
Preference number: 4 (lower is better)
Translates to: LQYLLQALLRTQGYLNQARANKP*RAFCGL
Trigger: AAGGCCGCAGAATGCCCTGCAGGGTTTGTTCGCCCT...TGCTTGATTTAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAATAAATACTGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR GCA 90 bp TCAGTGTTTCCATACAGTACAGGACTAAATGTGGCAACTGTGCATTGGAAAATTAGGGCGAACAAACCCTaGAGGGCATTCTGCGGCCTT +
Preference number: 4 (lower is better)
Translates to: SVFPYSTGLNVATVHWKIRANKP*RAFCGL
Trigger: AAGGCCGCAGAATGCCCTGCAGGGTTTGTTCGCCCT...AATTTTCCAATGCACAGTTGCCACATTTAGTCCTGTACTGTATGGAAACACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR GCA 90 bp CTGCAGTATTTATTACAAGCTCTACTCAGAACACAAGGCTACCTAAATCAAGCATGTGCTCGGGACGGCTaGTGCGGACTGCTCTTGTTT +
Preference number: 4 (lower is better)
Translates to: LQYLLQALLRTQGYLNQACARDG*CGLLLF
Trigger: AAACAAGAGCAGTCCGCAGCAGCCGTCCCGAGCACA...TGCTTGATTTAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAATAAATACTGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427067.6
CDS-3UTR TCA 90 bp CCATACAGTACAGGACTAAATGTGGCAACTGTGCATTGGAAAATTAATATTTCCGGAGGTCCAGCCTCTTaGAGTTCAAAGCACCTGCCC +
Preference number: 4 (lower is better)
Translates to: PYSTGLNVATVHWKINISGGPAS*SSKHLP
Trigger: GGGCAGGTGCTTTGAACTTCAAGAGGCTGGACCTCC...GGAAATATTAATTTTCCAATGCACAGTTGCCACATTTAGTCCTGTACTGTATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR TCA 90 bp CTGCAGTATTTATTACAAGCTCTACTCAGAACACAAGGCTACCTAAATCAAGCACACTTGTCGGCAGGCTaGGTGAAATCCAGACAGCTG +
Preference number: 4 (lower is better)
Translates to: LQYLLQALLRTQGYLNQAHLSAG*VKSRQL
Trigger: CAGCTGTCTGGATTTCACTCAGCCTGCCGACAAGTG...TGCTTGATTTAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAATAAATACTGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR TCA 90 bp TTATTACAAGCTCTACTCAGAACACAAGGCTACCTAAATCAAGCATTAGAGAAAGCCGGTGAGGCAGGATaGAGGAGGACACAGAGAGAG +
Preference number: 4 (lower is better)
Translates to: LLQALLRTQGYLNQALEKAGEAG*RRTQRE
Trigger: CTCTCTCTGTGTCCTCCTTCATCCTGCCTCACCGGC...TTTCTCTAATGCTTGATTTAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR TCA 90 bp CATTTAGAAGCTTCCACTAAAAACTCAAGCTGCAGTATTTATTACAAGCTCTACTCGTTGTCAGGCCGGTaGGGCAGGATGAAGGAGGAC +
Preference number: 4 (lower is better)
Translates to: HLEASTKNSSCSIYYKLYSLSGR*GRMKED
Trigger: GTCCTCCTTCATCCTGCCTCACCGGCCTGACAACGA...GTAGAGCTTGTAATAAATACTGCAGCTTGAGTTTTTAGTGGAAGCTTCTAAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR GCA 90 bp CCATCCACGGAGAAGATGATTAATGGAGGGCGAACAAACCTGTTATTATTCATTGAACGAGCTCCTCCTTaGCATGTCGAGGATTCTTGG +
Preference number: 4 (lower is better)
Translates to: PSTEKMINGGRTNLLLFIERAPP*HVEDSW
Trigger: CCAAGAATCCTCGACATGGCAAGGAGGAGCTCGTTC...AATGAATAATAACAGGTTTGTTCGCCCTCCATTAATCATCTTCTCCGTGGATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518958.1
CDS-3UTR GCA 90 bp GTGTTTCCATACAGTACAGGACTAAATGTGGCAACTGTGCATTGGAAAATTAATAGGGCGAACAAACCCTaGAGGGCATTCTGCGGCCTT +
Preference number: 4 (lower is better)
Translates to: VFPYSTGLNVATVHWKINRANKP*RAFCGL
Trigger: AAGGCCGCAGAATGCCCTGCAGGGTTTGTTCGCCCT...ATTAATTTTCCAATGCACAGTTGCCACATTTAGTCCTGTACTGTATGGAAACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CCA 90 bp AGGCAACTTTACAAAATCAGTGTTTCCATACAGTACAGGACTAAATGTGGCAACAGGCCTCTCATGATCTaGCAGGGTGAGCCACTGCAA +
Preference number: 4 (lower is better)
Translates to: RQLYKISVSIQYRTKCGNRPLMI*QGEPLQ
Trigger: TTGCAGTGGCTCACCCTGCCAGATCATGAGAGGCCT...GTTGCCACATTTAGTCCTGTACTGTATGGAAACACTGATTTTGTAAAGTTGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CCA 90 bp CTGCAGTATTTATTACAAGCTCTACTCAGAACACAAGGCTACCTAAATCAAGCACTGGGTAGCTGCGGCTaGTCTTTCGGAAGAAGTCCA +
Preference number: 4 (lower is better)
Translates to: LQYLLQALLRTQGYLNQALGSCG*SFGRSP
Trigger: TGGACTTCTTCCGAAAGACCAGCCGCAGCTACCCAG...TGCTTGATTTAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAATAAATACTGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CCA 90 bp TTATTACAAGCTCTACTCAGAACACAAGGCTACCTAAATCAAGCATTAGAGAAAATTATCCGATCGGCGTaGCGGGTCATGCTGCGGGAG +
Preference number: 4 (lower is better)
Translates to: LLQALLRTQGYLNQALEKIIRSA*RVMLRE
Trigger: CTCCCGCAGCATGACCCGCCACGCCGATCGGATAAT...TTTCTCTAATGCTTGATTTAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427067.6
CDS-3UTR TCA 90 bp CCATACAGTACAGGACTAAATGTGGCAACTGTGCATTGGAAAATTAATATTTCCCACTTGTCGGCAGGCTaGGTGAAATCCAGACAGCTG +
Preference number: 4 (lower is better)
Translates to: PYSTGLNVATVHWKINISHLSAG*VKSRQL
Trigger: CAGCTGTCTGGATTTCACTCAGCCTGCCGACAAGTG...GGAAATATTAATTTTCCAATGCACAGTTGCCACATTTAGTCCTGTACTGTATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR GCA 90 bp CTGCAGTATTTATTACAAGCTCTACTCAGAACACAAGGCTACCTAAATCAAGCACAAAGCACCTGCCCTTaGAAGATCCGGAGATGTTGG +
Preference number: 4 (lower is better)
Translates to: LQYLLQALLRTQGYLNQAQSTCP*KIRRCW
Trigger: CCAACATCTCCGGATCTTGCAAGGGCAGGTGCTTTG...TGCTTGATTTAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAATAAATACTGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR GCA 90 bp AAACTCAAGCTGCAGTATTTATTACAAGCTCTACTCAGAACACAAGGCTACCTACAAAGCACCTGCCCTTaGAAGATCCGGAGATGTTGG +
Preference number: 4 (lower is better)
Translates to: KLKLQYLLQALLRTQGYLQSTCP*KIRRCW
Trigger: CCAACATCTCCGGATCTTGCAAGGGCAGGTGCTTTG...TAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAATAAATACTGCAGCTTGAGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR GCA 90 bp AGGCAACTTTACAAAATCAGTGTTTCCATACAGTACAGGACTAAATGTGGCAACCCCTGCAGGGCATTCTaGGGCCTTTATTTCCTCACA +
Preference number: 4 (lower is better)
Translates to: RQLYKISVSIQYRTKCGNPCRAF*GLYFLT
Trigger: TGTGAGGAAATAAAGGCCGCAGAATGCCCTGCAGGG...GTTGCCACATTTAGTCCTGTACTGTATGGAAACACTGATTTTGTAAAGTTGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR GCA 90 bp TCAGTGTTTCCATACAGTACAGGACTAAATGTGGCAACTGTGCATTGGAAAATTCCCTGCAGGGCATTCTaGGGCCTTTATTTCCTCACA +
Preference number: 4 (lower is better)
Translates to: SVFPYSTGLNVATVHWKIPCRAF*GLYFLT
Trigger: TGTGAGGAAATAAAGGCCGCAGAATGCCCTGCAGGG...AATTTTCCAATGCACAGTTGCCACATTTAGTCCTGTACTGTATGGAAACACTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR GCA 90 bp GCTGCAGTATTTATTACAAGCTCTACTCAGAACACAAGGCTACCTAAATCAAGCCCAGCTTTCACCCCTTaGTTGGTGGCTGTAATCCAT +
Preference number: 4 (lower is better)
Translates to: AAVFITSSTQNTRLPKSSPAFTP*LVAVIH
Trigger: ATGGATTACAGCCACCAAGCAAGGGGTGAAAGCTGG...GCTTGATTTAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAATAAATACTGCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR GCA 90 bp ATATCAAATCTGCAGCACCATTTAGAAGCTTCCACTAAAAACTCAAGCTGCAGTAGTCCGATAAAGCACTaGAGGTCGCCCATAGAGGAG +
Preference number: 4 (lower is better)
Translates to: ISNLQHHLEASTKNSSCSSPIKH*RSPIEE
Trigger: CTCCTCTATGGGCGACCTGCAGTGCTTTATCGGACT...ACTGCAGCTTGAGTTTTTAGTGGAAGCTTCTAAATGGTGCTGCAGATTTGATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR GCA 90 bp AGGCAACTTTACAAAATCAGTGTTTCCATACAGTACAGGACTAAATGTGGCAACAGTCCGATAAAGCACTaGAGGTCGCCCATAGAGGAG +
Preference number: 4 (lower is better)
Translates to: RQLYKISVSIQYRTKCGNSPIKH*RSPIEE
Trigger: CTCCTCTATGGGCGACCTGCAGTGCTTTATCGGACT...GTTGCCACATTTAGTCCTGTACTGTATGGAAACACTGATTTTGTAAAGTTGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR GCA 90 bp CTCAAGCTGCAGTATTTATTACAAGCTCTACTCAGAACACAAGGCTACCTAAATGGATTTCTGGGTAGCTaGGGCTGGTCTTTCGGAAGA +
Preference number: 4 (lower is better)
Translates to: LKLQYLLQALLRTQGYLNGFLGS*GWSFGR
Trigger: TCTTCCGAAAGACCAGCCGCAGCTACCCAGAAATCC...ATTTAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAATAAATACTGCAGCTTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR GCA 90 bp CTGCAGTATTTATTACAAGCTCTACTCAGAACACAAGGCTACCTAAATCAAGCAGGATTTCTGGGTAGCTaGGGCTGGTCTTTCGGAAGA +
Preference number: 4 (lower is better)
Translates to: LQYLLQALLRTQGYLNQAGFLGS*GWSFGR
Trigger: TCTTCCGAAAGACCAGCCGCAGCTACCCAGAAATCC...TGCTTGATTTAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAATAAATACTGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR GCA 90 bp GCTGCAGTATTTATTACAAGCTCTACTCAGAACACAAGGCTACCTAAATCAAGCCGGACTGCTCTTGTTTaGACTGGCCGTTTGCTTTTG +
Preference number: 4 (lower is better)
Translates to: AAVFITSSTQNTRLPKSSRTALV*TGRLLL
Trigger: CAAAAGCAAACGGCCAGTGCAAACAAGAGCAGTCCG...GCTTGATTTAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAATAAATACTGCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427067.6
CDS-3UTR CCA 90 bp ATTACAAGCTCTACTCAGAACACAAGGCTACCTAAATCAAGCATTAGAGAAAAATACAGCAGTCTCCCCTaGCCAAGCAGTCCTCTGAGC +
Preference number: 4 (lower is better)
Translates to: ITSSTQNTRLPKSSIREKYSSLP*PSSPLS
Trigger: GCTCAGAGGACTGCTTGGCCAGGGGAGACTGCTGTA...TTTTTCTCTAATGCTTGATTTAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CCA 90 bp AGTACAGGACTAAATGTGGCAACTGTGCATTGGAAAATTAATATTTCCTCAATGTACAGCAGTCTCCCCTaGCCAAGCAGTCCTCTGAGC +
Preference number: 4 (lower is better)
Translates to: STGLNVATVHWKINISSMYSSLP*PSSPLS
Trigger: GCTCAGAGGACTGCTTGGCCAGGGGAGACTGCTGTA...CATTGAGGAAATATTAATTTTCCAATGCACAGTTGCCACATTTAGTCCTGTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CCA 90 bp CATTTAGAAGCTTCCACTAAAAACTCAAGCTGCAGTATTTATTACAAGCTCTACTACAGCAGTCTCCCCTaGCCAAGCAGTCCTCTGAGC +
Preference number: 4 (lower is better)
Translates to: HLEASTKNSSCSIYYKLYYSSLP*PSSPLS
Trigger: GCTCAGAGGACTGCTTGGCCAGGGGAGACTGCTGTA...GTAGAGCTTGTAATAAATACTGCAGCTTGAGTTTTTAGTGGAAGCTTCTAAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CCA 90 bp AATCTGCAGCACCATTTAGAAGCTTCCACTAAAAACTCAAGCTGCAGTATTTATAGGCCTCTCATGATCTaGCAGGGTGAGCCACTGCAA +
Preference number: 4 (lower is better)
Translates to: NLQHHLEASTKNSSCSIYRPLMI*QGEPLQ
Trigger: TTGCAGTGGCTCACCCTGCCAGATCATGAGAGGCCT...ATAAATACTGCAGCTTGAGTTTTTAGTGGAAGCTTCTAAATGGTGCTGCAGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CCA 90 bp AGGCAACTTTACAAAATCAGTGTTTCCATACAGTACAGGACTAAATGTGGCAACGATGGTCAGGAACGCTaGAAACCTCAGCCTGTTTGG +
Preference number: 4 (lower is better)
Translates to: RQLYKISVSIQYRTKCGNDGQER*KPQPVW
Trigger: CCAAACAGGCTGAGGTTTCCAGCGTTCCTGACCATC...GTTGCCACATTTAGTCCTGTACTGTATGGAAACACTGATTTTGTAAAGTTGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CCA 90 bp AAACTCAAGCTGCAGTATTTATTACAAGCTCTACTCAGAACACAAGGCTACCTAGATGGTCAGGAACGCTaGAAACCTCAGCCTGTTTGG +
Preference number: 4 (lower is better)
Translates to: KLKLQYLLQALLRTQGYLDGQER*KPQPVW
Trigger: CCAAACAGGCTGAGGTTTCCAGCGTTCCTGACCATC...TAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAATAAATACTGCAGCTTGAGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CCA 90 bp CTCAAGCTGCAGTATTTATTACAAGCTCTACTCAGAACACAAGGCTACCTAAATACGCAACTGGTCAGATaGTCAGGAACGCTGGAAACC +
Preference number: 4 (lower is better)
Translates to: LKLQYLLQALLRTQGYLNTQLVR*SGTLET
Trigger: GGTTTCCAGCGTTCCTGACCATCTGACCAGTTGCGT...ATTTAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAATAAATACTGCAGCTTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CCA 90 bp AGGCAACTTTACAAAATCAGTGTTTCCATACAGTACAGGACTAAATGTGGCAACACGCAACTGGTCAGATaGTCAGGAACGCTGGAAACC +
Preference number: 4 (lower is better)
Translates to: RQLYKISVSIQYRTKCGNTQLVR*SGTLET
Trigger: GGTTTCCAGCGTTCCTGACCATCTGACCAGTTGCGT...GTTGCCACATTTAGTCCTGTACTGTATGGAAACACTGATTTTGTAAAGTTGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CCA 90 bp ACTAAAAACTCAAGCTGCAGTATTTATTACAAGCTCTACTCAGAACACAAGGCTCTGGGTAGCTGCGGCTaGTCTTTCGGAAGAAGTCCA +
Preference number: 4 (lower is better)
Translates to: TKNSSCSIYYKLYSEHKALGSCG*SFGRSP
Trigger: TGGACTTCTTCCGAAAGACCAGCCGCAGCTACCCAG...AGCCTTGTGTTCTGAGTAGAGCTTGTAATAAATACTGCAGCTTGAGTTTTTAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CCA 90 bp AAACTCAAGCTGCAGTATTTATTACAAGCTCTACTCAGAACACAAGGCTACCTAGAGTGTCAGGATTTCTaGGTAGCTGCGGCTGGTCTT +
Preference number: 4 (lower is better)
Translates to: KLKLQYLLQALLRTQGYLECQDF*VAAAGL
Trigger: AAGACCAGCCGCAGCTACCCAGAAATCCTGACACTC...TAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAATAAATACTGCAGCTTGAGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CCA 90 bp TCAGTGTTTCCATACAGTACAGGACTAAATGTGGCAACTGTGCATTGGAAAATTGAGTGTCAGGATTTCTaGGTAGCTGCGGCTGGTCTT +
Preference number: 4 (lower is better)
Translates to: SVFPYSTGLNVATVHWKIECQDF*VAAAGL
Trigger: AAGACCAGCCGCAGCTACCCAGAAATCCTGACACTC...AATTTTCCAATGCACAGTTGCCACATTTAGTCCTGTACTGTATGGAAACACTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CCA 90 bp CTGCAGTATTTATTACAAGCTCTACTCAGAACACAAGGCTACCTAAATCAAGCAGAGTGTCAGGATTTCTaGGTAGCTGCGGCTGGTCTT +
Preference number: 4 (lower is better)
Translates to: LQYLLQALLRTQGYLNQAECQDF*VAAAGL
Trigger: AAGACCAGCCGCAGCTACCCAGAAATCCTGACACTC...TGCTTGATTTAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAATAAATACTGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR TCA 90 bp GCTGCAGTATTTATTACAAGCTCTACTCAGAACACAAGGCTACCTAAATCAAGCCATCCACGGAGAAGATaGTTAATGGAGGGCGAACAA +
Preference number: 4 (lower is better)
Translates to: AAVFITSSTQNTRLPKSSHPRRR*LMEGEQ
Trigger: TTGTTCGCCCTCCATTAATCATCTTCTCCGTGGATG...GCTTGATTTAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAATAAATACTGCAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR TCA 90 bp TCAGTGTTTCCATACAGTACAGGACTAAATGTGGCAACTGTGCATTGGAAAATTGCCTTTCTTCATGTATaGTGCACGGAAGCCATCCAC +
Preference number: 4 (lower is better)
Translates to: SVFPYSTGLNVATVHWKIAFLHV*CTEAIH
Trigger: GTGGATGGCTTCCGTGCATCATACATGAAGAAAGGC...AATTTTCCAATGCACAGTTGCCACATTTAGTCCTGTACTGTATGGAAACACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR TCA 90 bp CTGCAGTATTTATTACAAGCTCTACTCAGAACACAAGGCTACCTAAATCAAGCAGCCTTTCTTCATGTATaGTGCACGGAAGCCATCCAC +
Preference number: 4 (lower is better)
Translates to: LQYLLQALLRTQGYLNQAAFLHV*CTEAIH
Trigger: GTGGATGGCTTCCGTGCATCATACATGAAGAAAGGC...TGCTTGATTTAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAATAAATACTGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR TCA 90 bp CCATCCACGGAGAAGATGATTAATGGAGGGCGAACAAACCTGTTATTATTCATTTCTCGCCCTCGCAGATaGAAAGTGGCATCAAATACA +
Preference number: 4 (lower is better)
Translates to: PSTEKMINGGRTNLLLFISRPRR*KVASNT
Trigger: TGTATTTGATGCCACTTTTCATCTGCGAGGGCGAGA...AATGAATAATAACAGGTTTGTTCGCCCTCCATTAATCATCTTCTCCGTGGATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518958.1
CDS-3UTR TCA 90 bp ATGATTAAATTTCTCTCGCCCTCGCAGATGAAAAGTGGCATCAAATACAGGATCCCTCCCCACCATCTATaGTTAAATTTCTCTCGCCCT +
Preference number: 4 (lower is better)
Translates to: MIKFLSPSQMKSGIKYRIPPHHL*LNFSRP
Trigger: AGGGCGAGAGAAATTTAATCATAGATGGTGGGGAGG...GATCCTGTATTTGATGCCACTTTTCATCTGCGAGGGCGAGAGAAATTTAATCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518958.1
CDS-3UTR TCA 90 bp TCAGTGTTTCCATACAGTACAGGACTAAATGTGGCAACTGTGCATTGGAAAATTCATGATCTGGCAGGGTaGGCCACTGCAATATGGTTA +
Preference number: 4 (lower is better)
Translates to: SVFPYSTGLNVATVHWKIHDLAG*ATAIWL
Trigger: TAACCATATTGCAGTGGCTCACCCTGCCAGATCATG...AATTTTCCAATGCACAGTTGCCACATTTAGTCCTGTACTGTATGGAAACACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR TCA 90 bp CTCAAGCTGCAGTATTTATTACAAGCTCTACTCAGAACACAAGGCTACCTAAATCATGATCTGGCAGGGTaGGCCACTGCAATATGGTTA +
Preference number: 4 (lower is better)
Translates to: LKLQYLLQALLRTQGYLNHDLAG*ATAIWL
Trigger: TAACCATATTGCAGTGGCTCACCCTGCCAGATCATG...ATTTAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAATAAATACTGCAGCTTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR TCA 90 bp CTGCAGTATTTATTACAAGCTCTACTCAGAACACAAGGCTACCTAAATCAAGCACATGATCTGGCAGGGTaGGCCACTGCAATATGGTTA +
Preference number: 4 (lower is better)
Translates to: LQYLLQALLRTQGYLNQAHDLAG*ATAIWL
Trigger: TAACCATATTGCAGTGGCTCACCCTGCCAGATCATG...TGCTTGATTTAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAATAAATACTGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR TCA 90 bp AGTACAGGACTAAATGTGGCAACTGTGCATTGGAAAATTAATATTTCCTCAATGCACTTGTCGGCAGGCTaGGTGAAATCCAGACAGCTG +
Preference number: 4 (lower is better)
Translates to: STGLNVATVHWKINISSMHLSAG*VKSRQL
Trigger: CAGCTGTCTGGATTTCACTCAGCCTGCCGACAAGTG...CATTGAGGAAATATTAATTTTCCAATGCACAGTTGCCACATTTAGTCCTGTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR TCA 90 bp AAACTCAAGCTGCAGTATTTATTACAAGCTCTACTCAGAACACAAGGCTACCTAAGAAGTCCAGGCTGGTaGGATGTTCAATGTCACGCA +
Preference number: 4 (lower is better)
Translates to: KLKLQYLLQALLRTQGYLRSPGW*DVQCHA
Trigger: TGCGTGACATTGAACATCTCACCAGCCTGGACTTCT...TAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAATAAATACTGCAGCTTGAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR GCA 90 bp AATCTGCAGCACCATTTAGAAGCTTCCACTAAAAACTCAAGCTGCAGTATTTATGAACGAGCTCCTCCTTaGCATGTCGAGGATTCTTGG +
Preference number: 4 (lower is better)
Translates to: NLQHHLEASTKNSSCSIYERAPP*HVEDSW
Trigger: CCAAGAATCCTCGACATGGCAAGGAGGAGCTCGTTC...ATAAATACTGCAGCTTGAGTTTTTAGTGGAAGCTTCTAAATGGTGCTGCAGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000075322.11
ENST00000259486.10
CDS-3UTR GCA 90 bp AAACTCAAGCTGCAGTATTTATTACAAGCTCTACTCAGAACACAAGGCTACCTAGAAGTTCAAAGCACCTaGCCTTGCAAGATCCGGAGA +
Preference number: 4 (lower is better)
Translates to: KLKLQYLLQALLRTQGYLEVQST*PCKIRR
Trigger: TCTCCGGATCTTGCAAGGGCAGGTGCTTTGAACTTC...TAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAATAAATACTGCAGCTTGAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR GCA 90 bp TCAGTGTTTCCATACAGTACAGGACTAAATGTGGCAACTGTGCATTGGAAAATTGAAGTTCAAAGCACCTaGCCTTGCAAGATCCGGAGA +
Preference number: 4 (lower is better)
Translates to: SVFPYSTGLNVATVHWKIEVQST*PCKIRR
Trigger: TCTCCGGATCTTGCAAGGGCAGGTGCTTTGAACTTC...AATTTTCCAATGCACAGTTGCCACATTTAGTCCTGTACTGTATGGAAACACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR GCA 90 bp ACTAAAAACTCAAGCTGCAGTATTTATTACAAGCTCTACTCAGAACACAAGGCTAGTCCGATAAAGCACTaGAGGTCGCCCATAGAGGAG +
Preference number: 4 (lower is better)
Translates to: TKNSSCSIYYKLYSEHKASPIKH*RSPIEE
Trigger: CTCCTCTATGGGCGACCTGCAGTGCTTTATCGGACT...AGCCTTGTGTTCTGAGTAGAGCTTGTAATAAATACTGCAGCTTGAGTTTTTAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CCA 90 bp CTCAAGCTGCAGTATTTATTACAAGCTCTACTCAGAACACAAGGCTACCTAAATAAGATCCGGAGATGTTaGTCCAGGGGGAGTCTGATA +
Preference number: 4 (lower is better)
Translates to: LKLQYLLQALLRTQGYLNKIRRC*SRGSLI
Trigger: TATCAGACTCCCCCTGGACCAACATCTCCGGATCTT...ATTTAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAATAAATACTGCAGCTTGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CCA 90 bp CCATCCACGGAGAAGATGATTAATGGAGGGCGAACAAACCTGTTATTATTCATTAAACCACTTGGTAATTaGTACAGCAGTCTCCCCTGG +
Preference number: 4 (lower is better)
Translates to: PSTEKMINGGRTNLLLFIKPLGN*YSSLPW
Trigger: CCAGGGGAGACTGCTGTACCAATTACCAAGTGGTTT...AATGAATAATAACAGGTTTGTTCGCCCTCCATTAATCATCTTCTCCGTGGATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518958.1
CDS-3UTR CCA 90 bp ATTACAAGCTCTACTCAGAACACAAGGCTACCTAAATCAAGCATTAGAGAAAAAAGGCCTCTCATGATCTaGCAGGGTGAGCCACTGCAA +
Preference number: 4 (lower is better)
Translates to: ITSSTQNTRLPKSSIREKRPLMI*QGEPLQ
Trigger: TTGCAGTGGCTCACCCTGCCAGATCATGAGAGGCCT...TTTTTCTCTAATGCTTGATTTAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAAT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CCA 90 bp CTCAAGCTGCAGTATTTATTACAAGCTCTACTCAGAACACAAGGCTACCTAAATTTCCTCTGGCATGGTTaGCCTGAAGGTATTAGTGCG +
Preference number: 4 (lower is better)
Translates to: LKLQYLLQALLRTQGYLNFLWHG*PEGISA
Trigger: CGCACTAATACCTTCAGGCCAACCATGCCAGAGGAA...ATTTAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAATAAATACTGCAGCTTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CCA 90 bp AAACTCAAGCTGCAGTATTTATTACAAGCTCTACTCAGAACACAAGGCTACCTATCTGGTAACTTCCTCTaGCATGGTTGGCCTGAAGGT +
Preference number: 4 (lower is better)
Translates to: KLKLQYLLQALLRTQGYLSGNFL*HGWPEG
Trigger: ACCTTCAGGCCAACCATGCCAGAGGAAGTTACCAGA...TAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAATAAATACTGCAGCTTGAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CCA 90 bp AGGCAACTTTACAAAATCAGTGTTTCCATACAGTACAGGACTAAATGTGGCAACTCTGGTAACTTCCTCTaGCATGGTTGGCCTGAAGGT +
Preference number: 4 (lower is better)
Translates to: RQLYKISVSIQYRTKCGNSGNFL*HGWPEG
Trigger: ACCTTCAGGCCAACCATGCCAGAGGAAGTTACCAGA...GTTGCCACATTTAGTCCTGTACTGTATGGAAACACTGATTTTGTAAAGTTGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CCA 90 bp GTGTTTCCATACAGTACAGGACTAAATGTGGCAACTGTGCATTGGAAAATTAATGATGGTCAGGAACGCTaGAAACCTCAGCCTGTTTGG +
Preference number: 4 (lower is better)
Translates to: VFPYSTGLNVATVHWKINDGQER*KPQPVW
Trigger: CCAAACAGGCTGAGGTTTCCAGCGTTCCTGACCATC...ATTAATTTTCCAATGCACAGTTGCCACATTTAGTCCTGTACTGTATGGAAACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CCA 90 bp GTGTTTCCATACAGTACAGGACTAAATGTGGCAACTGTGCATTGGAAAATTAATACGCAACTGGTCAGATaGTCAGGAACGCTGGAAACC +
Preference number: 4 (lower is better)
Translates to: VFPYSTGLNVATVHWKINTQLVR*SGTLET
Trigger: GGTTTCCAGCGTTCCTGACCATCTGACCAGTTGCGT...ATTAATTTTCCAATGCACAGTTGCCACATTTAGTCCTGTACTGTATGGAAACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CCA 90 bp TTATTACAAGCTCTACTCAGAACACAAGGCTACCTAAATCAAGCATTAGAGAAACTGGGTAGCTGCGGCTaGTCTTTCGGAAGAAGTCCA +
Preference number: 4 (lower is better)
Translates to: LLQALLRTQGYLNQALEKLGSCG*SFGRSP
Trigger: TGGACTTCTTCCGAAAGACCAGCCGCAGCTACCCAG...TTTCTCTAATGCTTGATTTAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR TCA 90 bp AGGCAACTTTACAAAATCAGTGTTTCCATACAGTACAGGACTAAATGTGGCAACCATCCACGGAGAAGATaGTTAATGGAGGGCGAACAA +
Preference number: 4 (lower is better)
Translates to: RQLYKISVSIQYRTKCGNHPRRR*LMEGEQ
Trigger: TTGTTCGCCCTCCATTAATCATCTTCTCCGTGGATG...GTTGCCACATTTAGTCCTGTACTGTATGGAAACACTGATTTTGTAAAGTTGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR TCA 90 bp CCATACAGTACAGGACTAAATGTGGCAACTGTGCATTGGAAAATTAATATTTCCGCCTTTCTTCATGTATaGTGCACGGAAGCCATCCAC +
Preference number: 4 (lower is better)
Translates to: PYSTGLNVATVHWKINISAFLHV*CTEAIH
Trigger: GTGGATGGCTTCCGTGCATCATACATGAAGAAAGGC...GGAAATATTAATTTTCCAATGCACAGTTGCCACATTTAGTCCTGTACTGTATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR TCA 90 bp CTGCAGTATTTATTACAAGCTCTACTCAGAACACAAGGCTACCTAAATCAAGCATCTCGCCCTCGCAGATaGAAAGTGGCATCAAATACA +
Preference number: 4 (lower is better)
Translates to: LQYLLQALLRTQGYLNQASRPRR*KVASNT
Trigger: TGTATTTGATGCCACTTTTCATCTGCGAGGGCGAGA...TGCTTGATTTAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAATAAATACTGCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR TCA 90 bp CTCAAGCTGCAGTATTTATTACAAGCTCTACTCAGAACACAAGGCTACCTAAATTCTCGCCCTCGCAGATaGAAAGTGGCATCAAATACA +
Preference number: 4 (lower is better)
Translates to: LKLQYLLQALLRTQGYLNSRPRR*KVASNT
Trigger: TGTATTTGATGCCACTTTTCATCTGCGAGGGCGAGA...ATTTAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAATAAATACTGCAGCTTGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR TCA 90 bp ATATCAAATCTGCAGCACCATTTAGAAGCTTCCACTAAAAACTCAAGCTGCAGTTCTCGCCCTCGCAGATaGAAAGTGGCATCAAATACA +
Preference number: 4 (lower is better)
Translates to: ISNLQHHLEASTKNSSCSSRPRR*KVASNT
Trigger: TGTATTTGATGCCACTTTTCATCTGCGAGGGCGAGA...ACTGCAGCTTGAGTTTTTAGTGGAAGCTTCTAAATGGTGCTGCAGATTTGATAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR TCA 90 bp ATATCAAATCTGCAGCACCATTTAGAAGCTTCCACTAAAAACTCAAGCTGCAGTCCTCCCCACCATCTATaGTTAAATTTCTCTCGCCCT +
Preference number: 4 (lower is better)
Translates to: ISNLQHHLEASTKNSSCSPPHHL*LNFSRP
Trigger: AGGGCGAGAGAAATTTAATCATAGATGGTGGGGAGG...ACTGCAGCTTGAGTTTTTAGTGGAAGCTTCTAAATGGTGCTGCAGATTTGATAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR TCA 90 bp AGGCAACTTTACAAAATCAGTGTTTCCATACAGTACAGGACTAAATGTGGCAACAATATTCTCCGCTCGTaGGGGATGACAACAGACCAA +
Preference number: 4 (lower is better)
Translates to: RQLYKISVSIQYRTKCGNNILRS*GMTTDQ
Trigger: TTGGTCTGTTGTCATCCCTCACGAGCGGAGAATATT...GTTGCCACATTTAGTCCTGTACTGTATGGAAACACTGATTTTGTAAAGTTGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR TCA 90 bp CTCAAGCTGCAGTATTTATTACAAGCTCTACTCAGAACACAAGGCTACCTAAATTTAGTGCGCAGGAGATaGTTCAAACTTCCATGGGTC +
Preference number: 4 (lower is better)
Translates to: LKLQYLLQALLRTQGYLNLVRRR*FKLPWV
Trigger: GACCCATGGAAGTTTGAATCATCTCCTGCGCACTAA...ATTTAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAATAAATACTGCAGCTTGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR TCA 90 bp AAACTCAAGCTGCAGTATTTATTACAAGCTCTACTCAGAACACAAGGCTACCTATTAGTGCGCAGGAGATaGTTCAAACTTCCATGGGTC +
Preference number: 4 (lower is better)
Translates to: KLKLQYLLQALLRTQGYLLVRRR*FKLPWV
Trigger: GACCCATGGAAGTTTGAATCATCTCCTGCGCACTAA...TAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAATAAATACTGCAGCTTGAGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR TCA 90 bp TCAGTGTTTCCATACAGTACAGGACTAAATGTGGCAACTGTGCATTGGAAAATTCCAAACAGTTCTGACTaGAACTCGGAGAAACACGGA +
Preference number: 4 (lower is better)
Translates to: SVFPYSTGLNVATVHWKIPNSSD*NSEKHG
Trigger: TCCGTGTTTCTCCGAGTTTCAGTCAGAACTGTTTGG...AATTTTCCAATGCACAGTTGCCACATTTAGTCCTGTACTGTATGGAAACACTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR TCA 90 bp CCATACAGTACAGGACTAAATGTGGCAACTGTGCATTGGAAAATTAATATTTCCAGAAGTCCAGGCTGGTaGGATGTTCAATGTCACGCA +
Preference number: 4 (lower is better)
Translates to: PYSTGLNVATVHWKINISRSPGW*DVQCHA
Trigger: TGCGTGACATTGAACATCTCACCAGCCTGGACTTCT...GGAAATATTAATTTTCCAATGCACAGTTGCCACATTTAGTCCTGTACTGTATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR TCA 90 bp GTGTTTCCATACAGTACAGGACTAAATGTGGCAACTGTGCATTGGAAAATTAATAGAAGTCCAGGCTGGTaGGATGTTCAATGTCACGCA +
Preference number: 4 (lower is better)
Translates to: VFPYSTGLNVATVHWKINRSPGW*DVQCHA
Trigger: TGCGTGACATTGAACATCTCACCAGCCTGGACTTCT...ATTAATTTTCCAATGCACAGTTGCCACATTTAGTCCTGTACTGTATGGAAACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR TCA 90 bp GCTGCAGTATTTATTACAAGCTCTACTCAGAACACAAGGCTACCTAAATCAAGCCATTTCTGCTGCCTCTaGATTTCCTGGTTTCAGCTT +
Preference number: 4 (lower is better)
Translates to: AAVFITSSTQNTRLPKSSHFCCL*ISWFQL
Trigger: AAGCTGAAACCAGGAAATTCAGAGGCAGCAGAAATG...GCTTGATTTAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAATAAATACTGCAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427067.6
CDS-3UTR GCA 90 bp CATTTAGAAGCTTCCACTAAAAACTCAAGCTGCAGTATTTATTACAAGCTCTACGAACGAGCTCCTCCTTaGCATGTCGAGGATTCTTGG +
Preference number: 4 (lower is better)
Translates to: HLEASTKNSSCSIYYKLYERAPP*HVEDSW
Trigger: CCAAGAATCCTCGACATGGCAAGGAGGAGCTCGTTC...GTAGAGCTTGTAATAAATACTGCAGCTTGAGTTTTTAGTGGAAGCTTCTAAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000075322.11
ENST00000259486.10
CDS-3UTR GCA 90 bp CCATACAGTACAGGACTAAATGTGGCAACTGTGCATTGGAAAATTAATATTTCCGAAGTTCAAAGCACCTaGCCTTGCAAGATCCGGAGA +
Preference number: 4 (lower is better)
Translates to: PYSTGLNVATVHWKINISEVQST*PCKIRR
Trigger: TCTCCGGATCTTGCAAGGGCAGGTGCTTTGAACTTC...GGAAATATTAATTTTCCAATGCACAGTTGCCACATTTAGTCCTGTACTGTATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR GCA 90 bp GCTGCAGTATTTATTACAAGCTCTACTCAGAACACAAGGCTACCTAAATCAAGCTCATCATCAACCCAATaGGACTCTCCTTTGCAAACC +
Preference number: 4 (lower is better)
Translates to: AAVFITSSTQNTRLPKSSSSSTQ*DSPLQT
Trigger: GGTTTGCAAAGGAGAGTCGCATTGGGTTGATGATGA...GCTTGATTTAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAATAAATACTGCAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR GCA 90 bp CATTTAGAAGCTTCCACTAAAAACTCAAGCTGCAGTATTTATTACAAGCTCTACCCCTGCAGGGCATTCTaGGGCCTTTATTTCCTCACA +
Preference number: 4 (lower is better)
Translates to: HLEASTKNSSCSIYYKLYPCRAF*GLYFLT
Trigger: TGTGAGGAAATAAAGGCCGCAGAATGCCCTGCAGGG...GTAGAGCTTGTAATAAATACTGCAGCTTGAGTTTTTAGTGGAAGCTTCTAAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR GCA 90 bp ACTAAAAACTCAAGCTGCAGTATTTATTACAAGCTCTACTCAGAACACAAGGCTCCAGCTTTCACCCCTTaGTTGGTGGCTGTAATCCAT +
Preference number: 4 (lower is better)
Translates to: TKNSSCSIYYKLYSEHKAPAFTP*LVAVIH
Trigger: ATGGATTACAGCCACCAAGCAAGGGGTGAAAGCTGG...AGCCTTGTGTTCTGAGTAGAGCTTGTAATAAATACTGCAGCTTGAGTTTTTAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR GCA 90 bp GCTGCAGTATTTATTACAAGCTCTACTCAGAACACAAGGCTACCTAAATCAAGCGGCAGGGTGAGCCACTaGAATATGGTTAATATTCTC +
Preference number: 4 (lower is better)
Translates to: AAVFITSSTQNTRLPKSSGRVSH*NMVNIL
Trigger: GAGAATATTAACCATATTGCAGTGGCTCACCCTGCC...GCTTGATTTAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAATAAATACTGCAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR GCA 90 bp AGGCAACTTTACAAAATCAGTGTTTCCATACAGTACAGGACTAAATGTGGCAACGGTTTCCTTGCAACATaGCATCTGCGTTCCACCAAT +
Preference number: 4 (lower is better)
Translates to: RQLYKISVSIQYRTKCGNGFLAT*HLRSTN
Trigger: ATTGGTGGAACGCAGATGGCATGTTGCAAGGAAACC...GTTGCCACATTTAGTCCTGTACTGTATGGAAACACTGATTTTGTAAAGTTGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR GCA 90 bp ATTACAAGCTCTACTCAGAACACAAGGCTACCTAAATCAAGCATTAGAGAAAAAGGATTTCTGGGTAGCTaGGGCTGGTCTTTCGGAAGA +
Preference number: 4 (lower is better)
Translates to: ITSSTQNTRLPKSSIREKGFLGS*GWSFGR
Trigger: TCTTCCGAAAGACCAGCCGCAGCTACCCAGAAATCC...TTTTTCTCTAATGCTTGATTTAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR GCA 90 bp CATTTAGAAGCTTCCACTAAAAACTCAAGCTGCAGTATTTATTACAAGCTCTACTTGGGATTTCTCCAGTaGAGATGTAGTCAGGGGGCC +
Preference number: 4 (lower is better)
Translates to: HLEASTKNSSCSIYYKLYLGFLQ*RCSQGA
Trigger: GGCCCCCTGACTACATCTGCACTGGAGAAATCCCAA...GTAGAGCTTGTAATAAATACTGCAGCTTGAGTTTTTAGTGGAAGCTTCTAAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000427067.6
CDS-3UTR CCA 90 bp TGTGATTCTGGATATAGCCCAGTGGCCAAAGTGTATAAGTTAGGAAAGGTTTTACATGTCGAGGATTCTTaGAAAGCCTTTTGCAGCGTG +
Preference number: 4 (lower is better)
Translates to: CDSGYSPVAKVYKLGKVLHVEDS*KAFCSV
Trigger: CACGCTGCAAAAGGCTTTCCAAGAATCCTCGACATG...TAAAACCTTTCCTAACTTATACACTTTGGCCACTGGGCTATATCCAGAATCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518958.1
CDS-3UTR CCA 90 bp CTGCAGTATTTATTACAAGCTCTACTCAGAACACAAGGCTACCTAAATCAAGCAAAACCACTTGGTAATTaGTACAGCAGTCTCCCCTGG +
Preference number: 4 (lower is better)
Translates to: LQYLLQALLRTQGYLNQAKPLGN*YSSLPW
Trigger: CCAGGGGAGACTGCTGTACCAATTACCAAGTGGTTT...TGCTTGATTTAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAATAAATACTGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CCA 90 bp TCAGTGTTTCCATACAGTACAGGACTAAATGTGGCAACTGTGCATTGGAAAATTCCCATTATTAGGAGCTaGCTTCAATCCCAGGAGATC +
Preference number: 4 (lower is better)
Translates to: SVFPYSTGLNVATVHWKIPIIRS*LQSQEI
Trigger: GATCTCCTGGGATTGAAGCCAGCTCCTAATAATGGG...AATTTTCCAATGCACAGTTGCCACATTTAGTCCTGTACTGTATGGAAACACTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CCA 90 bp AGGCAACTTTACAAAATCAGTGTTTCCATACAGTACAGGACTAAATGTGGCAACCCCATTATTAGGAGCTaGCTTCAATCCCAGGAGATC +
Preference number: 4 (lower is better)
Translates to: RQLYKISVSIQYRTKCGNPIIRS*LQSQEI
Trigger: GATCTCCTGGGATTGAAGCCAGCTCCTAATAATGGG...GTTGCCACATTTAGTCCTGTACTGTATGGAAACACTGATTTTGTAAAGTTGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CCA 90 bp AATCTGCAGCACCATTTAGAAGCTTCCACTAAAAACTCAAGCTGCAGTATTTATTTCCTCTGGCATGGTTaGCCTGAAGGTATTAGTGCG +
Preference number: 4 (lower is better)
Translates to: NLQHHLEASTKNSSCSIYFLWHG*PEGISA
Trigger: CGCACTAATACCTTCAGGCCAACCATGCCAGAGGAA...ATAAATACTGCAGCTTGAGTTTTTAGTGGAAGCTTCTAAATGGTGCTGCAGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CCA 90 bp ACTAAAAACTCAAGCTGCAGTATTTATTACAAGCTCTACTCAGAACACAAGGCTTCTGGTAACTTCCTCTaGCATGGTTGGCCTGAAGGT +
Preference number: 4 (lower is better)
Translates to: TKNSSCSIYYKLYSEHKASGNFL*HGWPEG
Trigger: ACCTTCAGGCCAACCATGCCAGAGGAAGTTACCAGA...AGCCTTGTGTTCTGAGTAGAGCTTGTAATAAATACTGCAGCTTGAGTTTTTAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CCA 90 bp TCAGTGTTTCCATACAGTACAGGACTAAATGTGGCAACTGTGCATTGGAAAATTGAGTTGGAACAGGAATaGAACTGCCTTCCACGTACT +
Preference number: 4 (lower is better)
Translates to: SVFPYSTGLNVATVHWKIELEQE*NCLPRT
Trigger: AGTACGTGGAAGGCAGTTCCATTCCTGTTCCAACTC...AATTTTCCAATGCACAGTTGCCACATTTAGTCCTGTACTGTATGGAAACACTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CCA 90 bp AGGCAACTTTACAAAATCAGTGTTTCCATACAGTACAGGACTAAATGTGGCAACGCTGTAGTAGTGAGTTaGAACAGGAATGGAACTGCC +
Preference number: 4 (lower is better)
Translates to: RQLYKISVSIQYRTKCGNAVVVS*NRNGTA
Trigger: GGCAGTTCCATTCCTGTTCCAACTCACTACTACAGC...GTTGCCACATTTAGTCCTGTACTGTATGGAAACACTGATTTTGTAAAGTTGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CCA 90 bp AAACTCAAGCTGCAGTATTTATTACAAGCTCTACTCAGAACACAAGGCTACCTAGCTGTAGTAGTGAGTTaGAACAGGAATGGAACTGCC +
Preference number: 4 (lower is better)
Translates to: KLKLQYLLQALLRTQGYLAVVVS*NRNGTA
Trigger: GGCAGTTCCATTCCTGTTCCAACTCACTACTACAGC...TAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAATAAATACTGCAGCTTGAGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CCA 90 bp ATATCAAATCTGCAGCACCATTTAGAAGCTTCCACTAAAAACTCAAGCTGCAGTGCTGTAGTAGTGAGTTaGAACAGGAATGGAACTGCC +
Preference number: 4 (lower is better)
Translates to: ISNLQHHLEASTKNSSCSAVVVS*NRNGTA
Trigger: GGCAGTTCCATTCCTGTTCCAACTCACTACTACAGC...ACTGCAGCTTGAGTTTTTAGTGGAAGCTTCTAAATGGTGCTGCAGATTTGATAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CCA 90 bp AGGCAACTTTACAAAATCAGTGTTTCCATACAGTACAGGACTAAATGTGGCAACCTTTGGAGGAGCAACTaGTCTTTCCTGTCTCCTCTT +
Preference number: 4 (lower is better)
Translates to: RQLYKISVSIQYRTKCGNLWRSN*SFLSPL
Trigger: AAGAGGAGACAGGAAAGACCAGTTGCTCCTCCAAAG...GTTGCCACATTTAGTCCTGTACTGTATGGAAACACTGATTTTGTAAAGTTGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259486.10
CDS-3UTR TCA 90 bp AAACTCAAGCTGCAGTATTTATTACAAGCTCTACTCAGAACACAAGGCTACCTACTCCAACGGCAAAAGTaGACAGGGATATTATCTGAC +
Preference number: 4 (lower is better)
Translates to: KLKLQYLLQALLRTQGYLLQRQK*TGILSD
Trigger: GTCAGATAATATCCCTGTTCACTTTTGCCGTTGGAG...TAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAATAAATACTGCAGCTTGAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000075322.11
ENST00000259486.10
CDS-3UTR TCA 90 bp CCATACAGTACAGGACTAAATGTGGCAACTGTGCATTGGAAAATTAATATTTCCCCTCCCCACCATCTATaGTTAAATTTCTCTCGCCCT +
Preference number: 4 (lower is better)
Translates to: PYSTGLNVATVHWKINISPPHHL*LNFSRP
Trigger: AGGGCGAGAGAAATTTAATCATAGATGGTGGGGAGG...GGAAATATTAATTTTCCAATGCACAGTTGCCACATTTAGTCCTGTACTGTATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR TCA 90 bp CCATACAGTACAGGACTAAATGTGGCAACTGTGCATTGGAAAATTAATATTTCCAATATTCTCCGCTCGTaGGGGATGACAACAGACCAA +
Preference number: 4 (lower is better)
Translates to: PYSTGLNVATVHWKINISNILRS*GMTTDQ
Trigger: TTGGTCTGTTGTCATCCCTCACGAGCGGAGAATATT...GGAAATATTAATTTTCCAATGCACAGTTGCCACATTTAGTCCTGTACTGTATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR TCA 90 bp ACTAAAAACTCAAGCTGCAGTATTTATTACAAGCTCTACTCAGAACACAAGGCTAATATTCTCCGCTCGTaGGGGATGACAACAGACCAA +
Preference number: 4 (lower is better)
Translates to: TKNSSCSIYYKLYSEHKANILRS*GMTTDQ
Trigger: TTGGTCTGTTGTCATCCCTCACGAGCGGAGAATATT...AGCCTTGTGTTCTGAGTAGAGCTTGTAATAAATACTGCAGCTTGAGTTTTTAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR TCA 90 bp GCTGCAGTATTTATTACAAGCTCTACTCAGAACACAAGGCTACCTAAATCAAGCCAGTTCTATCACATGTaGCATCTTCCATTCCATGGT +
Preference number: 4 (lower is better)
Translates to: AAVFITSSTQNTRLPKSSQFYHM*HLPFHG
Trigger: ACCATGGAATGGAAGATGTCACATGTGATAGAACTG...GCTTGATTTAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAATAAATACTGCAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR TCA 90 bp AGGCAACTTTACAAAATCAGTGTTTCCATACAGTACAGGACTAAATGTGGCAACCAGTCTGCATGCTGTTaGCCTTGTTATCAAATCCGT +
Preference number: 4 (lower is better)
Translates to: RQLYKISVSIQYRTKCGNQSACC*PCYQIR
Trigger: ACGGATTTGATAACAAGGTCAACAGCATGCAGACTG...GTTGCCACATTTAGTCCTGTACTGTATGGAAACACTGATTTTGTAAAGTTGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR TCA 90 bp CTGCAGTATTTATTACAAGCTCTACTCAGAACACAAGGCTACCTAAATCAAGCAATATTTAGCCTCTGGTaGAGAGCTCAGATAAGGAGG +
Preference number: 4 (lower is better)
Translates to: LQYLLQALLRTQGYLNQAIFSLW*RAQIRR
Trigger: CCTCCTTATCTGAGCTCTTCACCAGAGGCTAAATAT...TGCTTGATTTAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAATAAATACTGCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR TCA 90 bp GCTGCAGTATTTATTACAAGCTCTACTCAGAACACAAGGCTACCTAAATCAAGCAATTCCAGACCCGTTTaGAAGCAGGATACATTGGAA +
Preference number: 4 (lower is better)
Translates to: AAVFITSSTQNTRLPKSSNSRPV*KQDTLE
Trigger: TTCCAATGTATCCTGCTTTCAAACGGGTCTGGAATT...GCTTGATTTAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAATAAATACTGCAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR GCA 90 bp CTGCAGTATTTATTACAAGCTCTACTCAGAACACAAGGCTACCTAAATCAAGCATTCCTCCCATCCTTCTaGTCTCTTAATTCGATGTGC +
Preference number: 4 (lower is better)
Translates to: LQYLLQALLRTQGYLNQAFLPSF*SLNSMC
Trigger: GCACATCGAATTAAGAGAGCAGAAGGATGGGAGGAA...TGCTTGATTTAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAATAAATACTGCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR GCA 90 bp ATGATTAAATTTCTCTCGCCCTCGCAGATGAAAAGTGGCATCAAATACAGGATCAATGCGACTCTCCTTTaGAAACCACTTGGTAATTGG +
Preference number: 4 (lower is better)
Translates to: MIKFLSPSQMKSGIKYRINATLL*KPLGNW
Trigger: CCAATTACCAAGTGGTTTGCAAAGGAGAGTCGCATT...GATCCTGTATTTGATGCCACTTTTCATCTGCGAGGGCGAGAGAAATTTAATCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518958.1
CDS-3UTR GCA 90 bp ATATCAAATCTGCAGCACCATTTAGAAGCTTCCACTAAAAACTCAAGCTGCAGTTCATCATCAACCCAATaGGACTCTCCTTTGCAAACC +
Preference number: 4 (lower is better)
Translates to: ISNLQHHLEASTKNSSCSSSSTQ*DSPLQT
Trigger: GGTTTGCAAAGGAGAGTCGCATTGGGTTGATGATGA...ACTGCAGCTTGAGTTTTTAGTGGAAGCTTCTAAATGGTGCTGCAGATTTGATAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR GCA 90 bp TCAGTGTTTCCATACAGTACAGGACTAAATGTGGCAACTGTGCATTGGAAAATTGGCAGGGTGAGCCACTaGAATATGGTTAATATTCTC +
Preference number: 4 (lower is better)
Translates to: SVFPYSTGLNVATVHWKIGRVSH*NMVNIL
Trigger: GAGAATATTAACCATATTGCAGTGGCTCACCCTGCC...AATTTTCCAATGCACAGTTGCCACATTTAGTCCTGTACTGTATGGAAACACTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR GCA 90 bp GCTGCAGTATTTATTACAAGCTCTACTCAGAACACAAGGCTACCTAAATCAAGCTTGCAACATGCCATCTaGGTTCCACCAATAAATGGA +
Preference number: 4 (lower is better)
Translates to: AAVFITSSTQNTRLPKSSLQHAI*VPPING
Trigger: TCCATTTATTGGTGGAACGCAGATGGCATGTTGCAA...GCTTGATTTAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAATAAATACTGCAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR GCA 90 bp ACTAAAAACTCAAGCTGCAGTATTTATTACAAGCTCTACTCAGAACACAAGGCTGGTTTCCTTGCAACATaGCATCTGCGTTCCACCAAT +
Preference number: 4 (lower is better)
Translates to: TKNSSCSIYYKLYSEHKAGFLAT*HLRSTN
Trigger: ATTGGTGGAACGCAGATGGCATGTTGCAAGGAAACC...AGCCTTGTGTTCTGAGTAGAGCTTGTAATAAATACTGCAGCTTGAGTTTTTAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR GCA 90 bp ATATCAAATCTGCAGCACCATTTAGAAGCTTCCACTAAAAACTCAAGCTGCAGTATCCAAAGGTTTCCTTaGAACATGCCATCTGCGTTC +
Preference number: 4 (lower is better)
Translates to: ISNLQHHLEASTKNSSCSIQRFP*NMPSAF
Trigger: GAACGCAGATGGCATGTTGCAAGGAAACCTTTGGAT...ACTGCAGCTTGAGTTTTTAGTGGAAGCTTCTAAATGGTGCTGCAGATTTGATAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR GCA 90 bp ATATCAAATCTGCAGCACCATTTAGAAGCTTCCACTAAAAACTCAAGCTGCAGTCCTTATCATCACAAGTaGAGCCCAGGTCAAAATCAG +
Preference number: 4 (lower is better)
Translates to: ISNLQHHLEASTKNSSCSPYHHK*SPGQNQ
Trigger: CTGATTTTGACCTGGGCTGCACTTGTGATGATAAGG...ACTGCAGCTTGAGTTTTTAGTGGAAGCTTCTAAATGGTGCTGCAGATTTGATAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR GCA 90 bp CTCAAGCTGCAGTATTTATTACAAGCTCTACTCAGAACACAAGGCTACCTAAATCCTTATCATCACAAGTaGAGCCCAGGTCAAAATCAG +
Preference number: 4 (lower is better)
Translates to: LKLQYLLQALLRTQGYLNPYHHK*SPGQNQ
Trigger: CTGATTTTGACCTGGGCTGCACTTGTGATGATAAGG...ATTTAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAATAAATACTGCAGCTTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR GCA 90 bp GCTGCAGTATTTATTACAAGCTCTACTCAGAACACAAGGCTACCTAAATCAAGCGAACAGGAATGGAACTaGCTTCCACGTACTGTTTTA +
Preference number: 4 (lower is better)
Translates to: AAVFITSSTQNTRLPKSSEQEWN*LPRTVL
Trigger: TAAAACAGTACGTGGAAGGCAGTTCCATTCCTGTTC...GCTTGATTTAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAATAAATACTGCAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CCA 90 bp CATTTAGAAGCTTCCACTAAAAACTCAAGCTGCAGTATTTATTACAAGCTCTACAAGATCCGGAGATGTTaGTCCAGGGGGAGTCTGATA +
Preference number: 4 (lower is better)
Translates to: HLEASTKNSSCSIYYKLYKIRRC*SRGSLI
Trigger: TATCAGACTCCCCCTGGACCAACATCTCCGGATCTT...GTAGAGCTTGTAATAAATACTGCAGCTTGAGTTTTTAGTGGAAGCTTCTAAATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CCA 90 bp CCATACAGTACAGGACTAAATGTGGCAACTGTGCATTGGAAAATTAATATTTCCAAACCACTTGGTAATTaGTACAGCAGTCTCCCCTGG +
Preference number: 4 (lower is better)
Translates to: PYSTGLNVATVHWKINISKPLGN*YSSLPW
Trigger: CCAGGGGAGACTGCTGTACCAATTACCAAGTGGTTT...GGAAATATTAATTTTCCAATGCACAGTTGCCACATTTAGTCCTGTACTGTATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CCA 90 bp ACTAAAAACTCAAGCTGCAGTATTTATTACAAGCTCTACTCAGAACACAAGGCTAAACCACTTGGTAATTaGTACAGCAGTCTCCCCTGG +
Preference number: 4 (lower is better)
Translates to: TKNSSCSIYYKLYSEHKAKPLGN*YSSLPW
Trigger: CCAGGGGAGACTGCTGTACCAATTACCAAGTGGTTT...AGCCTTGTGTTCTGAGTAGAGCTTGTAATAAATACTGCAGCTTGAGTTTTTAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CCA 90 bp AAACTCAAGCTGCAGTATTTATTACAAGCTCTACTCAGAACACAAGGCTACCTAAGGAAAGGTTTTAGTTaGGTACACCGGCCTCATGTA +
Preference number: 4 (lower is better)
Translates to: KLKLQYLLQALLRTQGYLRKGFS*VHRPHV
Trigger: TACATGAGGCCGGTGTACCCAACTAAAACCTTTCCT...TAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAATAAATACTGCAGCTTGAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CCA 90 bp TCAGTGTTTCCATACAGTACAGGACTAAATGTGGCAACTGTGCATTGGAAAATTAGGAAAGGTTTTAGTTaGGTACACCGGCCTCATGTA +
Preference number: 4 (lower is better)
Translates to: SVFPYSTGLNVATVHWKIRKGFS*VHRPHV
Trigger: TACATGAGGCCGGTGTACCCAACTAAAACCTTTCCT...AATTTTCCAATGCACAGTTGCCACATTTAGTCCTGTACTGTATGGAAACACTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CCA 90 bp TGTGATTCTGGATATAGCCCAGTGGCCAAAGTGTATAAGTTAGGAAAGGTTTTAAGGAAAGGTTTTAGTTaGGTACACCGGCCTCATGTA +
Preference number: 4 (lower is better)
Translates to: CDSGYSPVAKVYKLGKVLRKGFS*VHRPHV
Trigger: TACATGAGGCCGGTGTACCCAACTAAAACCTTTCCT...TAAAACCTTTCCTAACTTATACACTTTGGCCACTGGGCTATATCCAGAATCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518958.1
CDS-3UTR CCA 90 bp TTGAATTGCCAACAATTCCATGTGATTCTGGATATAGCCCAGTGGCCAAAGTGTCTCGCAGATGAAAAGTaGCATCAAATACAGGATCAT +
Preference number: 4 (lower is better)
Translates to: LNCQQFHVILDIAQWPKCLADEK*HQIQDH
Trigger: ATGATCCTGTATTTGATGCCACTTTTCATCTGCGAG...ACACTTTGGCCACTGGGCTATATCCAGAATCACATGGAATTGTTGGCAATTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518958.1
CDS-3UTR CCA 90 bp ATATCAAATCTGCAGCACCATTTAGAAGCTTCCACTAAAAACTCAAGCTGCAGTACATCTTCCATTCCATaGTCTCCGACAAAGATGACG +
Preference number: 4 (lower is better)
Translates to: ISNLQHHLEASTKNSSCSTSSIP*SPTKMT
Trigger: CGTCATCTTTGTCGGAGACCATGGAATGGAAGATGT...ACTGCAGCTTGAGTTTTTAGTGGAAGCTTCTAAATGGTGCTGCAGATTTGATAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CCA 90 bp AAACTCAAGCTGCAGTATTTATTACAAGCTCTACTCAGAACACAAGGCTACCTAACATCTTCCATTCCATaGTCTCCGACAAAGATGACG +
Preference number: 4 (lower is better)
Translates to: KLKLQYLLQALLRTQGYLTSSIP*SPTKMT
Trigger: CGTCATCTTTGTCGGAGACCATGGAATGGAAGATGT...TAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAATAAATACTGCAGCTTGAGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CCA 90 bp CCATACAGTACAGGACTAAATGTGGCAACTGTGCATTGGAAAATTAATATTTCCCCCATTATTAGGAGCTaGCTTCAATCCCAGGAGATC +
Preference number: 4 (lower is better)
Translates to: PYSTGLNVATVHWKINISPIIRS*LQSQEI
Trigger: GATCTCCTGGGATTGAAGCCAGCTCCTAATAATGGG...GGAAATATTAATTTTCCAATGCACAGTTGCCACATTTAGTCCTGTACTGTATGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CCA 90 bp ACTAAAAACTCAAGCTGCAGTATTTATTACAAGCTCTACTCAGAACACAAGGCTGAGTTGGAACAGGAATaGAACTGCCTTCCACGTACT +
Preference number: 4 (lower is better)
Translates to: TKNSSCSIYYKLYSEHKAELEQE*NCLPRT
Trigger: AGTACGTGGAAGGCAGTTCCATTCCTGTTCCAACTC...AGCCTTGTGTTCTGAGTAGAGCTTGTAATAAATACTGCAGCTTGAGTTTTTAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CCA 90 bp GTGTTTCCATACAGTACAGGACTAAATGTGGCAACTGTGCATTGGAAAATTAATGAGTTGGAACAGGAATaGAACTGCCTTCCACGTACT +
Preference number: 4 (lower is better)
Translates to: VFPYSTGLNVATVHWKINELEQE*NCLPRT
Trigger: AGTACGTGGAAGGCAGTTCCATTCCTGTTCCAACTC...ATTAATTTTCCAATGCACAGTTGCCACATTTAGTCCTGTACTGTATGGAAACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR TCA 90 bp ATTACAAGCTCTACTCAGAACACAAGGCTACCTAAATCAAGCATTAGAGAAAAACATCCACGGAGAAGATaGTTAATGGAGGGCGAACAA +
Preference number: 4 (lower is better)
Translates to: ITSSTQNTRLPKSSIREKHPRRR*LMEGEQ
Trigger: TTGTTCGCCCTCCATTAATCATCTTCTCCGTGGATG...TTTTTCTCTAATGCTTGATTTAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR TCA 90 bp ATTACAAGCTCTACTCAGAACACAAGGCTACCTAAATCAAGCATTAGAGAAAAACCTCCCCACCATCTATaGTTAAATTTCTCTCGCCCT +
Preference number: 4 (lower is better)
Translates to: ITSSTQNTRLPKSSIREKPPHHL*LNFSRP
Trigger: AGGGCGAGAGAAATTTAATCATAGATGGTGGGGAGG...TTTTTCTCTAATGCTTGATTTAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR TCA 90 bp CTGCAGTATTTATTACAAGCTCTACTCAGAACACAAGGCTACCTAAATCAAGCACAGTTCTATCACATGTaGCATCTTCCATTCCATGGT +
Preference number: 4 (lower is better)
Translates to: LQYLLQALLRTQGYLNQAQFYHM*HLPFHG
Trigger: ACCATGGAATGGAAGATGTCACATGTGATAGAACTG...TGCTTGATTTAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAATAAATACTGCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR TCA 90 bp AGGCAACTTTACAAAATCAGTGTTTCCATACAGTACAGGACTAAATGTGGCAACCAGTTCTATCACATGTaGCATCTTCCATTCCATGGT +
Preference number: 4 (lower is better)
Translates to: RQLYKISVSIQYRTKCGNQFYHM*HLPFHG
Trigger: ACCATGGAATGGAAGATGTCACATGTGATAGAACTG...GTTGCCACATTTAGTCCTGTACTGTATGGAAACACTGATTTTGTAAAGTTGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR TCA 90 bp CCATACAGTACAGGACTAAATGTGGCAACTGTGCATTGGAAAATTAATATTTCCCAGTCTGCATGCTGTTaGCCTTGTTATCAAATCCGT +
Preference number: 4 (lower is better)
Translates to: PYSTGLNVATVHWKINISQSACC*PCYQIR
Trigger: ACGGATTTGATAACAAGGTCAACAGCATGCAGACTG...GGAAATATTAATTTTCCAATGCACAGTTGCCACATTTAGTCCTGTACTGTATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR TCA 90 bp TTATTACAAGCTCTACTCAGAACACAAGGCTACCTAAATCAAGCATTAGAGAAATTAGTGCGCAGGAGATaGTTCAAACTTCCATGGGTC +
Preference number: 4 (lower is better)
Translates to: LLQALLRTQGYLNQALEKLVRRR*FKLPWV
Trigger: GACCCATGGAAGTTTGAATCATCTCCTGCGCACTAA...TTTCTCTAATGCTTGATTTAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR TCA 90 bp CTGCAGTATTTATTACAAGCTCTACTCAGAACACAAGGCTACCTAAATCAAGCAAGGTCAAAATCAGACTaGAGGTACATAATCCCTGGA +
Preference number: 4 (lower is better)
Translates to: LQYLLQALLRTQGYLNQARSKSD*RYIIPG
Trigger: TCCAGGGATTATGTACCTTCAGTCTGATTTTGACCT...TGCTTGATTTAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAATAAATACTGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR TCA 90 bp AAACTCAAGCTGCAGTATTTATTACAAGCTCTACTCAGAACACAAGGCTACCTAGTAGACCCTTTTGTATaGAGCCGTTTGTTGAGTTCA +
Preference number: 4 (lower is better)
Translates to: KLKLQYLLQALLRTQGYLVDPFV*SRLLSS
Trigger: TGAACTCAACAAACGGCTTCATACAAAAGGGTCTAC...TAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAATAAATACTGCAGCTTGAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR TCA 90 bp CTGCAGTATTTATTACAAGCTCTACTCAGAACACAAGGCTACCTAAATCAAGCAGTAGACCCTTTTGTATaGAGCCGTTTGTTGAGTTCA +
Preference number: 4 (lower is better)
Translates to: LQYLLQALLRTQGYLNQAVDPFV*SRLLSS
Trigger: TGAACTCAACAAACGGCTTCATACAAAAGGGTCTAC...TGCTTGATTTAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAATAAATACTGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR TCA 90 bp AGGCAACTTTACAAAATCAGTGTTTCCATACAGTACAGGACTAAATGTGGCAACGTAGACCCTTTTGTATaGAGCCGTTTGTTGAGTTCA +
Preference number: 4 (lower is better)
Translates to: RQLYKISVSIQYRTKCGNVDPFV*SRLLSS
Trigger: TGAACTCAACAAACGGCTTCATACAAAAGGGTCTAC...GTTGCCACATTTAGTCCTGTACTGTATGGAAACACTGATTTTGTAAAGTTGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR TCA 90 bp AGTACAGGACTAAATGTGGCAACTGTGCATTGGAAAATTAATATTTCCTCAATGCCAAACAGTTCTGACTaGAACTCGGAGAAACACGGA +
Preference number: 4 (lower is better)
Translates to: STGLNVATVHWKINISSMPNSSD*NSEKHG
Trigger: TCCGTGTTTCTCCGAGTTTCAGTCAGAACTGTTTGG...CATTGAGGAAATATTAATTTTCCAATGCACAGTTGCCACATTTAGTCCTGTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR TCA 90 bp ATTACAAGCTCTACTCAGAACACAAGGCTACCTAAATCAAGCATTAGAGAAAAACCAAACAGTTCTGACTaGAACTCGGAGAAACACGGA +
Preference number: 4 (lower is better)
Translates to: ITSSTQNTRLPKSSIREKPNSSD*NSEKHG
Trigger: TCCGTGTTTCTCCGAGTTTCAGTCAGAACTGTTTGG...TTTTTCTCTAATGCTTGATTTAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR TCA 90 bp GTGTTTCCATACAGTACAGGACTAAATGTGGCAACTGTGCATTGGAAAATTAATATATTTAGCCTCTGGTaGAGAGCTCAGATAAGGAGG +
Preference number: 4 (lower is better)
Translates to: VFPYSTGLNVATVHWKINIFSLW*RAQIRR
Trigger: CCTCCTTATCTGAGCTCTTCACCAGAGGCTAAATAT...ATTAATTTTCCAATGCACAGTTGCCACATTTAGTCCTGTACTGTATGGAAACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR TCA 90 bp AGGCAACTTTACAAAATCAGTGTTTCCATACAGTACAGGACTAAATGTGGCAACAATTCCAGACCCGTTTaGAAGCAGGATACATTGGAA +
Preference number: 4 (lower is better)
Translates to: RQLYKISVSIQYRTKCGNNSRPV*KQDTLE
Trigger: TTCCAATGTATCCTGCTTTCAAACGGGTCTGGAATT...GTTGCCACATTTAGTCCTGTACTGTATGGAAACACTGATTTTGTAAAGTTGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR TCA 90 bp AAACTCAAGCTGCAGTATTTATTACAAGCTCTACTCAGAACACAAGGCTACCTAAATTCCAGACCCGTTTaGAAGCAGGATACATTGGAA +
Preference number: 4 (lower is better)
Translates to: KLKLQYLLQALLRTQGYLNSRPV*KQDTLE
Trigger: TTCCAATGTATCCTGCTTTCAAACGGGTCTGGAATT...TAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAATAAATACTGCAGCTTGAGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR TCA 90 bp CTCAAGCTGCAGTATTTATTACAAGCTCTACTCAGAACACAAGGCTACCTAAATCTGTGTGCATCTTCATaGGTTCTTCTACCCATTTTG +
Preference number: 4 (lower is better)
Translates to: LKLQYLLQALLRTQGYLNLCASS*VLLPIL
Trigger: CAAAATGGGTAGAAGAACTCATGAAGATGCACACAG...ATTTAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAATAAATACTGCAGCTTGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR TCA 90 bp AATCTGCAGCACCATTTAGAAGCTTCCACTAAAAACTCAAGCTGCAGTATTTATCTCCAACGGCAAAAGTaGACAGGGATATTATCCGAT +
Preference number: 4 (lower is better)
Translates to: NLQHHLEASTKNSSCSIYLQRQK*TGILSD
Trigger: ATCGGATAATATCCCTGTTCACTTTTGCCGTTGGAG...ATAAATACTGCAGCTTGAGTTTTTAGTGGAAGCTTCTAAATGGTGCTGCAGATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427067.6
CDS-3UTR GCA 90 bp AATCTGCAGCACCATTTAGAAGCTTCCACTAAAAACTCAAGCTGCAGTATTTATTTCCTCCCATCCTTCTaGTCTCTTAATTCGATGTGC +
Preference number: 4 (lower is better)
Translates to: NLQHHLEASTKNSSCSIYFLPSF*SLNSMC
Trigger: GCACATCGAATTAAGAGAGCAGAAGGATGGGAGGAA...ATAAATACTGCAGCTTGAGTTTTTAGTGGAAGCTTCTAAATGGTGCTGCAGATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR GCA 90 bp AGGCAACTTTACAAAATCAGTGTTTCCATACAGTACAGGACTAAATGTGGCAACAATGCGACTCTCCTTTaGAAACCACTTGGTAATTGG +
Preference number: 4 (lower is better)
Translates to: RQLYKISVSIQYRTKCGNNATLL*KPLGNW
Trigger: CCAATTACCAAGTGGTTTGCAAAGGAGAGTCGCATT...GTTGCCACATTTAGTCCTGTACTGTATGGAAACACTGATTTTGTAAAGTTGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR GCA 90 bp AAACTCAAGCTGCAGTATTTATTACAAGCTCTACTCAGAACACAAGGCTACCTAAATGCGACTCTCCTTTaGAAACCACTTGGTAATTGG +
Preference number: 4 (lower is better)
Translates to: KLKLQYLLQALLRTQGYLNATLL*KPLGNW
Trigger: CCAATTACCAAGTGGTTTGCAAAGGAGAGTCGCATT...TAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAATAAATACTGCAGCTTGAGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR GCA 90 bp TCAGTGTTTCCATACAGTACAGGACTAAATGTGGCAACTGTGCATTGGAAAATTTGTAGGGAGAGTGTGTaGCACAAGACCTTAGTTTTT +
Preference number: 4 (lower is better)
Translates to: SVFPYSTGLNVATVHWKICRESV*HKTLVF
Trigger: AAAAACTAAGGTCTTGTGGCACACACTCTCCCTACA...AATTTTCCAATGCACAGTTGCCACATTTAGTCCTGTACTGTATGGAAACACTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR GCA 90 bp ATATCAAATCTGCAGCACCATTTAGAAGCTTCCACTAAAAACTCAAGCTGCAGTTGTAGGGAGAGTGTGTaGCACAAGACCTTAGTTTTT +
Preference number: 4 (lower is better)
Translates to: ISNLQHHLEASTKNSSCSCRESV*HKTLVF
Trigger: AAAAACTAAGGTCTTGTGGCACACACTCTCCCTACA...ACTGCAGCTTGAGTTTTTAGTGGAAGCTTCTAAATGGTGCTGCAGATTTGATAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR GCA 90 bp AGGCAACTTTACAAAATCAGTGTTTCCATACAGTACAGGACTAAATGTGGCAACTTGCAACATGCCATCTaGGTTCCACCAATAAATGGA +
Preference number: 4 (lower is better)
Translates to: RQLYKISVSIQYRTKCGNLQHAI*VPPING
Trigger: TCCATTTATTGGTGGAACGCAGATGGCATGTTGCAA...GTTGCCACATTTAGTCCTGTACTGTATGGAAACACTGATTTTGTAAAGTTGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR GCA 90 bp AAACTCAAGCTGCAGTATTTATTACAAGCTCTACTCAGAACACAAGGCTACCTAGAACAGGAATGGAACTaGCTTCCACGTACTGTTTTA +
Preference number: 4 (lower is better)
Translates to: KLKLQYLLQALLRTQGYLEQEWN*LPRTVL
Trigger: TAAAACAGTACGTGGAAGGCAGTTCCATTCCTGTTC...TAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAATAAATACTGCAGCTTGAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR GCA 90 bp CTCAAGCTGCAGTATTTATTACAAGCTCTACTCAGAACACAAGGCTACCTAAATGAACAGGAATGGAACTaGCTTCCACGTACTGTTTTA +
Preference number: 4 (lower is better)
Translates to: LKLQYLLQALLRTQGYLNEQEWN*LPRTVL
Trigger: TAAAACAGTACGTGGAAGGCAGTTCCATTCCTGTTC...ATTTAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAATAAATACTGCAGCTTGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR GCA 90 bp AGTACAGGACTAAATGTGGCAACTGTGCATTGGAAAATTAATATTTCCTCAATGCGCACCCTAGCTGTGTaGATCTTCATGAGTTCTTCT +
Preference number: 4 (lower is better)
Translates to: STGLNVATVHWKINISSMRTLAV*IFMSSS
Trigger: AGAAGAACTCATGAAGATGCACACAGCTAGGGTGCG...CATTGAGGAAATATTAATTTTCCAATGCACAGTTGCCACATTTAGTCCTGTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR GCA 90 bp ATTACAAGCTCTACTCAGAACACAAGGCTACCTAAATCAAGCATTAGAGAAAAACGCACCCTAGCTGTGTaGATCTTCATGAGTTCTTCT +
Preference number: 4 (lower is better)
Translates to: ITSSTQNTRLPKSSIREKRTLAV*IFMSSS
Trigger: AGAAGAACTCATGAAGATGCACACAGCTAGGGTGCG...TTTTTCTCTAATGCTTGATTTAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR GCA 90 bp TTATTACAAGCTCTACTCAGAACACAAGGCTACCTAAATCAAGCATTAGAGAAACGCACCCTAGCTGTGTaGATCTTCATGAGTTCTTCT +
Preference number: 4 (lower is better)
Translates to: LLQALLRTQGYLNQALEKRTLAV*IFMSSS
Trigger: AGAAGAACTCATGAAGATGCACACAGCTAGGGTGCG...TTTCTCTAATGCTTGATTTAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR GCA 90 bp TCAGTGTTTCCATACAGTACAGGACTAAATGTGGCAACTGTGCATTGGAAAATTTCGCTCTCATATGTATaGAGGTATGTCTTGAGTGTC +
Preference number: 4 (lower is better)
Translates to: SVFPYSTGLNVATVHWKISLSYV*RYVLSV
Trigger: GACACTCAAGACATACCTGCATACATATGAGAGCGA...AATTTTCCAATGCACAGTTGCCACATTTAGTCCTGTACTGTATGGAAACACTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR GCA 90 bp CTCAAGCTGCAGTATTTATTACAAGCTCTACTCAGAACACAAGGCTACCTAAATTCGCTCTCATATGTATaGAGGTATGTCTTGAGTGTC +
Preference number: 4 (lower is better)
Translates to: LKLQYLLQALLRTQGYLNSLSYV*RYVLSV
Trigger: GACACTCAAGACATACCTGCATACATATGAGAGCGA...ATTTAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAATAAATACTGCAGCTTGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CCA 90 bp AGTACAGGACTAAATGTGGCAACTGTGCATTGGAAAATTAATATTTCCTCAATGCATGTCGAGGATTCTTaGAAAGCCTTTTGCAGCGTG +
Preference number: 4 (lower is better)
Translates to: STGLNVATVHWKINISSMHVEDS*KAFCSV
Trigger: CACGCTGCAAAAGGCTTTCCAAGAATCCTCGACATG...CATTGAGGAAATATTAATTTTCCAATGCACAGTTGCCACATTTAGTCCTGTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000075322.11
ENST00000259486.10
CDS-3UTR CCA 90 bp TTATTACAAGCTCTACTCAGAACACAAGGCTACCTAAATCAAGCATTAGAGAAACATGTCGAGGATTCTTaGAAAGCCTTTTGCAGCGTG +
Preference number: 4 (lower is better)
Translates to: LLQALLRTQGYLNQALEKHVEDS*KAFCSV
Trigger: CACGCTGCAAAAGGCTTTCCAAGAATCCTCGACATG...TTTCTCTAATGCTTGATTTAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000075322.11
ENST00000259486.10
CDS-3UTR CCA 90 bp AGGCAACTTTACAAAATCAGTGTTTCCATACAGTACAGGACTAAATGTGGCAACCATAGTGCAAACGTTTaGGAAGGTGCTGTTTCAAGT +
Preference number: 4 (lower is better)
Translates to: RQLYKISVSIQYRTKCGNHSANV*EGAVSS
Trigger: ACTTGAAACAGCACCTTCCCAAACGTTTGCACTATG...GTTGCCACATTTAGTCCTGTACTGTATGGAAACACTGATTTTGTAAAGTTGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CCA 90 bp AATCTGCAGCACCATTTAGAAGCTTCCACTAAAAACTCAAGCTGCAGTATTTATTGCTCTTGTTTGCACTaGCCGTTTGCTTTTGGGATT +
Preference number: 4 (lower is better)
Translates to: NLQHHLEASTKNSSCSIYCSCLH*PFAFGI
Trigger: AATCCCAAAAGCAAACGGCCAGTGCAAACAAGAGCA...ATAAATACTGCAGCTTGAGTTTTTAGTGGAAGCTTCTAAATGGTGCTGCAGATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427067.6
CDS-3UTR TCA 90 bp ATTACAAGCTCTACTCAGAACACAAGGCTACCTAAATCAAGCATTAGAGAAAAACTCCAACGGCAAAAGTaGACAGGGATATTATCTGAC +
Preference number: 4 (lower is better)
Translates to: ITSSTQNTRLPKSSIREKLQRQK*TGILSD
Trigger: GTCAGATAATATCCCTGTTCACTTTTGCCGTTGGAG...TTTTTCTCTAATGCTTGATTTAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000075322.11
ENST00000259486.10
CDS-3UTR TCA 90 bp ACTAAAAACTCAAGCTGCAGTATTTATTACAAGCTCTACTCAGAACACAAGGCTAGGTCAAAATCAGACTaGAGGTACATAATCCCTGGA +
Preference number: 4 (lower is better)
Translates to: TKNSSCSIYYKLYSEHKARSKSD*RYIIPG
Trigger: TCCAGGGATTATGTACCTTCAGTCTGATTTTGACCT...AGCCTTGTGTTCTGAGTAGAGCTTGTAATAAATACTGCAGCTTGAGTTTTTAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR TCA 90 bp AAACTCAAGCTGCAGTATTTATTACAAGCTCTACTCAGAACACAAGGCTACCTATATGAAGCCGTTTGTTaGGTTCATCCAACTTGTTCT +
Preference number: 4 (lower is better)
Translates to: KLKLQYLLQALLRTQGYLYEAVC*VHPTCS
Trigger: AGAACAAGTTGGATGAACTCAACAAACGGCTTCATA...TAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAATAAATACTGCAGCTTGAGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR TCA 90 bp TTATTACAAGCTCTACTCAGAACACAAGGCTACCTAAATCAAGCATTAGAGAAAATATTTAGCCTCTGGTaGAGAGCTCAGATAAGGAGG +
Preference number: 4 (lower is better)
Translates to: LLQALLRTQGYLNQALEKIFSLW*RAQIRR
Trigger: CCTCCTTATCTGAGCTCTTCACCAGAGGCTAAATAT...TTTCTCTAATGCTTGATTTAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR GCA 90 bp TTATTACAAGCTCTACTCAGAACACAAGGCTACCTAAATCAAGCATTAGAGAAATCTTGGAAAGCCTTTTaGAGCGTGTTCTCTTTGCCT +
Preference number: 4 (lower is better)
Translates to: LLQALLRTQGYLNQALEKSWKAF*SVFSLP
Trigger: AGGCAAAGAGAACACGCTGCAAAAGGCTTTCCAAGA...TTTCTCTAATGCTTGATTTAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000075322.11
ENST00000259486.10
CDS-3UTR GCA 90 bp CATTTAGAAGCTTCCACTAAAAACTCAAGCTGCAGTATTTATTACAAGCTCTACTCTTGGAAAGCCTTTTaGAGCGTGTTCTCTTTGCCT +
Preference number: 4 (lower is better)
Translates to: HLEASTKNSSCSIYYKLYSWKAF*SVFSLP
Trigger: AGGCAAAGAGAACACGCTGCAAAAGGCTTTCCAAGA...GTAGAGCTTGTAATAAATACTGCAGCTTGAGTTTTTAGTGGAAGCTTCTAAATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000075322.11
ENST00000259486.10
CDS-3UTR GCA 90 bp CATTTAGAAGCTTCCACTAAAAACTCAAGCTGCAGTATTTATTACAAGCTCTACTTCCTCCCATCCTTCTaGTCTCTTAATTCGATGTGC +
Preference number: 4 (lower is better)
Translates to: HLEASTKNSSCSIYYKLYFLPSF*SLNSMC
Trigger: GCACATCGAATTAAGAGAGCAGAAGGATGGGAGGAA...GTAGAGCTTGTAATAAATACTGCAGCTTGAGTTTTTAGTGGAAGCTTCTAAATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR GCA 90 bp AGTACAGGACTAAATGTGGCAACTGTGCATTGGAAAATTAATATTTCCTCAATGTCATCATCAACCCAATaGGACTCTCCTTTGCAAACC +
Preference number: 4 (lower is better)
Translates to: STGLNVATVHWKINISSMSSSTQ*DSPLQT
Trigger: GGTTTGCAAAGGAGAGTCGCATTGGGTTGATGATGA...CATTGAGGAAATATTAATTTTCCAATGCACAGTTGCCACATTTAGTCCTGTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR GCA 90 bp AGTACAGGACTAAATGTGGCAACTGTGCATTGGAAAATTAATATTTCCTCAATGGGCAGGGTGAGCCACTaGAATATGGTTAATATTCTC +
Preference number: 4 (lower is better)
Translates to: STGLNVATVHWKINISSMGRVSH*NMVNIL
Trigger: GAGAATATTAACCATATTGCAGTGGCTCACCCTGCC...CATTGAGGAAATATTAATTTTCCAATGCACAGTTGCCACATTTAGTCCTGTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR GCA 90 bp ATATCAAATCTGCAGCACCATTTAGAAGCTTCCACTAAAAACTCAAGCTGCAGTACGTTGACACACCGATaGAGTTTTAGTTGTTTCAGT +
Preference number: 4 (lower is better)
Translates to: ISNLQHHLEASTKNSSCSTLTHR*SFSCFS
Trigger: ACTGAAACAACTAAAACTGCATCGGTGTGTCAACGT...ACTGCAGCTTGAGTTTTTAGTGGAAGCTTCTAAATGGTGCTGCAGATTTGATAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR GCA 90 bp AGGCAACTTTACAAAATCAGTGTTTCCATACAGTACAGGACTAAATGTGGCAACACGTTGACACACCGATaGAGTTTTAGTTGTTTCAGT +
Preference number: 4 (lower is better)
Translates to: RQLYKISVSIQYRTKCGNTLTHR*SFSCFS
Trigger: ACTGAAACAACTAAAACTGCATCGGTGTGTCAACGT...GTTGCCACATTTAGTCCTGTACTGTATGGAAACACTGATTTTGTAAAGTTGCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR GCA 90 bp ACTAAAAACTCAAGCTGCAGTATTTATTACAAGCTCTACTCAGAACACAAGGCTTTGCAACATGCCATCTaGGTTCCACCAATAAATGGA +
Preference number: 4 (lower is better)
Translates to: TKNSSCSIYYKLYSEHKALQHAI*VPPING
Trigger: TCCATTTATTGGTGGAACGCAGATGGCATGTTGCAA...AGCCTTGTGTTCTGAGTAGAGCTTGTAATAAATACTGCAGCTTGAGTTTTTAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR GCA 90 bp TTATTACAAGCTCTACTCAGAACACAAGGCTACCTAAATCAAGCATTAGAGAAAATCCAAAGGTTTCCTTaGAACATGCCATCTGCGTTC +
Preference number: 4 (lower is better)
Translates to: LLQALLRTQGYLNQALEKIQRFP*NMPSAF
Trigger: GAACGCAGATGGCATGTTGCAAGGAAACCTTTGGAT...TTTCTCTAATGCTTGATTTAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR GCA 90 bp AGTACAGGACTAAATGTGGCAACTGTGCATTGGAAAATTAATATTTCCTCAATGCCTTATCATCACAAGTaGAGCCCAGGTCAAAATCAG +
Preference number: 4 (lower is better)
Translates to: STGLNVATVHWKINISSMPYHHK*SPGQNQ
Trigger: CTGATTTTGACCTGGGCTGCACTTGTGATGATAAGG...CATTGAGGAAATATTAATTTTCCAATGCACAGTTGCCACATTTAGTCCTGTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR GCA 90 bp AATCTGCAGCACCATTTAGAAGCTTCCACTAAAAACTCAAGCTGCAGTATTTATTCGCTCTCATATGTATaGAGGTATGTCTTGAGTGTC +
Preference number: 4 (lower is better)
Translates to: NLQHHLEASTKNSSCSIYSLSYV*RYVLSV
Trigger: GACACTCAAGACATACCTGCATACATATGAGAGCGA...ATAAATACTGCAGCTTGAGTTTTTAGTGGAAGCTTCTAAATGGTGCTGCAGATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR GCA 90 bp AGTACAGGACTAAATGTGGCAACTGTGCATTGGAAAATTAATATTTCCTCAATGTTTGCACTGGCCGTTTaGTTTTGGGATTTCTCCAGT +
Preference number: 4 (lower is better)
Translates to: STGLNVATVHWKINISSMFALAV*FWDFSS
Trigger: ACTGGAGAAATCCCAAAAGCAAACGGCCAGTGCAAA...CATTGAGGAAATATTAATTTTCCAATGCACAGTTGCCACATTTAGTCCTGTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427067.6
CDS-3UTR CCA 90 bp TTATTACAAGCTCTACTCAGAACACAAGGCTACCTAAATCAAGCATTAGAGAAAAGGAAAGGTTTTAGTTaGGTACACCGGCCTCATGTA +
Preference number: 4 (lower is better)
Translates to: LLQALLRTQGYLNQALEKRKGFS*VHRPHV
Trigger: TACATGAGGCCGGTGTACCCAACTAAAACCTTTCCT...TTTCTCTAATGCTTGATTTAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CCA 90 bp ATTACAAGCTCTACTCAGAACACAAGGCTACCTAAATCAAGCATTAGAGAAAAAACATCTTCCATTCCATaGTCTCCGACAAAGATGACG +
Preference number: 4 (lower is better)
Translates to: ITSSTQNTRLPKSSIREKTSSIP*SPTKMT
Trigger: CGTCATCTTTGTCGGAGACCATGGAATGGAAGATGT...TTTTTCTCTAATGCTTGATTTAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAAT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CCA 90 bp CCATACAGTACAGGACTAAATGTGGCAACTGTGCATTGGAAAATTAATATTTCCCATAGTGCAAACGTTTaGGAAGGTGCTGTTTCAAGT +
Preference number: 4 (lower is better)
Translates to: PYSTGLNVATVHWKINISHSANV*EGAVSS
Trigger: ACTTGAAACAGCACCTTCCCAAACGTTTGCACTATG...GGAAATATTAATTTTCCAATGCACAGTTGCCACATTTAGTCCTGTACTGTATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CCA 90 bp CTGCAGTATTTATTACAAGCTCTACTCAGAACACAAGGCTACCTAAATCAAGCAAAGGTACATAATCCCTaGATAATTGGGTCTGGTAAC +
Preference number: 4 (lower is better)
Translates to: LQYLLQALLRTQGYLNQAKVHNP*IIGSGN
Trigger: GTTACCAGACCCAATTATCCAGGGATTATGTACCTT...TGCTTGATTTAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAATAAATACTGCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CCA 90 bp CTCAAGCTGCAGTATTTATTACAAGCTCTACTCAGAACACAAGGCTACCTAAATAAGGTACATAATCCCTaGATAATTGGGTCTGGTAAC +
Preference number: 4 (lower is better)
Translates to: LKLQYLLQALLRTQGYLNKVHNP*IIGSGN
Trigger: GTTACCAGACCCAATTATCCAGGGATTATGTACCTT...ATTTAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAATAAATACTGCAGCTTGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CCA 90 bp TCAGTGTTTCCATACAGTACAGGACTAAATGTGGCAACTGTGCATTGGAAAATTAAACCTCAGCCTGTTTaGAAACAGTATATGATGTCC +
Preference number: 4 (lower is better)
Translates to: SVFPYSTGLNVATVHWKIKPQPV*KQYMMS
Trigger: GGACATCATATACTGTTTCCAAACAGGCTGAGGTTT...AATTTTCCAATGCACAGTTGCCACATTTAGTCCTGTACTGTATGGAAACACTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CCA 90 bp GCTGCAGTATTTATTACAAGCTCTACTCAGAACACAAGGCTACCTAAATCAAGCGAAAGCAGGATACATTaGAACCATATTGGTTACAAG +
Preference number: 4 (lower is better)
Translates to: AAVFITSSTQNTRLPKSSESRIH*NHIGYK
Trigger: CTTGTAACCAATATGGTTCCAATGTATCCTGCTTTC...GCTTGATTTAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAATAAATACTGCAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CCA 90 bp AAACTCAAGCTGCAGTATTTATTACAAGCTCTACTCAGAACACAAGGCTACCTAGTCATAGTCGAAGATTaGTCCACTTATCACGTTAAC +
Preference number: 4 (lower is better)
Translates to: KLKLQYLLQALLRTQGYLVIVED*STYHVN
Trigger: GTTAACGTGATAAGTGGACCAATCTTCGACTATGAC...TAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAATAAATACTGCAGCTTGAGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR TCA 90 bp ATATCAAATCTGCAGCACCATTTAGAAGCTTCCACTAAAAACTCAAGCTGCAGTTACAGGATCATACATTaGATTGCCAACAATTCCATG +
Preference number: 4 (lower is better)
Translates to: ISNLQHHLEASTKNSSCSYRIIH*IANNSM
Trigger: CATGGAATTGTTGGCAATTCAATGTATGATCCTGTA...ACTGCAGCTTGAGTTTTTAGTGGAAGCTTCTAAATGGTGCTGCAGATTTGATAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR TCA 90 bp TGTGATTCTGGATATAGCCCAGTGGCCAAAGTGTATAAGTTAGGAAAGGTTTTATACAGGATCATACATTaGATTGCCAACAATTCCATG +
Preference number: 4 (lower is better)
Translates to: CDSGYSPVAKVYKLGKVLYRIIH*IANNSM
Trigger: CATGGAATTGTTGGCAATTCAATGTATGATCCTGTA...TAAAACCTTTCCTAACTTATACACTTTGGCCACTGGGCTATATCCAGAATCACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518958.1
CDS-3UTR TCA 90 bp AGTACAGGACTAAATGTGGCAACTGTGCATTGGAAAATTAATATTTCCTCAATGAGGTCAAAATCAGACTaGAGGTACATAATCCCTGGA +
Preference number: 4 (lower is better)
Translates to: STGLNVATVHWKINISSMRSKSD*RYIIPG
Trigger: TCCAGGGATTATGTACCTTCAGTCTGATTTTGACCT...CATTGAGGAAATATTAATTTTCCAATGCACAGTTGCCACATTTAGTCCTGTACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR TCA 90 bp GTGTTTCCATACAGTACAGGACTAAATGTGGCAACTGTGCATTGGAAAATTAATTATGAAGCCGTTTGTTaGGTTCATCCAACTTGTTCT +
Preference number: 4 (lower is better)
Translates to: VFPYSTGLNVATVHWKINYEAVC*VHPTCS
Trigger: AGAACAAGTTGGATGAACTCAACAAACGGCTTCATA...ATTAATTTTCCAATGCACAGTTGCCACATTTAGTCCTGTACTGTATGGAAACAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR TCA 90 bp ATTACAAGCTCTACTCAGAACACAAGGCTACCTAAATCAAGCATTAGAGAAAAACTGTGTGCATCTTCATaGGTTCTTCTACCCATTTTG +
Preference number: 4 (lower is better)
Translates to: ITSSTQNTRLPKSSIREKLCASS*VLLPIL
Trigger: CAAAATGGGTAGAAGAACTCATGAAGATGCACACAG...TTTTTCTCTAATGCTTGATTTAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR TCA 90 bp CATTTAGAAGCTTCCACTAAAAACTCAAGCTGCAGTATTTATTACAAGCTCTACCTGTGTGCATCTTCATaGGTTCTTCTACCCATTTTG +
Preference number: 4 (lower is better)
Translates to: HLEASTKNSSCSIYYKLYLCASS*VLLPIL
Trigger: CAAAATGGGTAGAAGAACTCATGAAGATGCACACAG...GTAGAGCTTGTAATAAATACTGCAGCTTGAGTTTTTAGTGGAAGCTTCTAAATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR GCA 90 bp AGTACAGGACTAAATGTGGCAACTGTGCATTGGAAAATTAATATTTCCTCAATGTGTAGGGAGAGTGTGTaGCACAAGACCTTAGTTTTT +
Preference number: 4 (lower is better)
Translates to: STGLNVATVHWKINISSMCRESV*HKTLVF
Trigger: AAAAACTAAGGTCTTGTGGCACACACTCTCCCTACA...CATTGAGGAAATATTAATTTTCCAATGCACAGTTGCCACATTTAGTCCTGTACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR GCA 90 bp ATATCAAATCTGCAGCACCATTTAGAAGCTTCCACTAAAAACTCAAGCTGCAGTAGTCCATCCATTAATTaGCCCACAATTTTGTCGATT +
Preference number: 4 (lower is better)
Translates to: ISNLQHHLEASTKNSSCSSPSIN*PTILSI
Trigger: AATCGACAAAATTGTGGGGCAATTAATGGATGGACT...ACTGCAGCTTGAGTTTTTAGTGGAAGCTTCTAAATGGTGCTGCAGATTTGATAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR GCA 90 bp CCATACAGTACAGGACTAAATGTGGCAACTGTGCATTGGAAAATTAATATTTCCACGTTGACACACCGATaGAGTTTTAGTTGTTTCAGT +
Preference number: 4 (lower is better)
Translates to: PYSTGLNVATVHWKINISTLTHR*SFSCFS
Trigger: ACTGAAACAACTAAAACTGCATCGGTGTGTCAACGT...GGAAATATTAATTTTCCAATGCACAGTTGCCACATTTAGTCCTGTACTGTATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR GCA 90 bp AATCTGCAGCACCATTTAGAAGCTTCCACTAAAAACTCAAGCTGCAGTATTTATCCTACAAAAACAGTCTaGATGCTGTTGACCTTGTTA +
Preference number: 4 (lower is better)
Translates to: NLQHHLEASTKNSSCSIYPTKTV*MLLTLL
Trigger: TAACAAGGTCAACAGCATGCAGACTGTTTTTGTAGG...ATAAATACTGCAGCTTGAGTTTTTAGTGGAAGCTTCTAAATGGTGCTGCAGATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR GCA 90 bp GTGTTTCCATACAGTACAGGACTAAATGTGGCAACTGTGCATTGGAAAATTAATCCTACAAAAACAGTCTaGATGCTGTTGACCTTGTTA +
Preference number: 4 (lower is better)
Translates to: VFPYSTGLNVATVHWKINPTKTV*MLLTLL
Trigger: TAACAAGGTCAACAGCATGCAGACTGTTTTTGTAGG...ATTAATTTTCCAATGCACAGTTGCCACATTTAGTCCTGTACTGTATGGAAACAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR GCA 90 bp CCATACAGTACAGGACTAAATGTGGCAACTGTGCATTGGAAAATTAATATTTCCCCTACAAAAACAGTCTaGATGCTGTTGACCTTGTTA +
Preference number: 4 (lower is better)
Translates to: PYSTGLNVATVHWKINISPTKTV*MLLTLL
Trigger: TAACAAGGTCAACAGCATGCAGACTGTTTTTGTAGG...GGAAATATTAATTTTCCAATGCACAGTTGCCACATTTAGTCCTGTACTGTATGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR GCA 90 bp CTCAAGCTGCAGTATTTATTACAAGCTCTACTCAGAACACAAGGCTACCTAAATATTGGTTACAAGGAATaGATCATATTTAGCCTCTGG +
Preference number: 4 (lower is better)
Translates to: LKLQYLLQALLRTQGYLNIGYKE*IIFSLW
Trigger: CCAGAGGCTAAATATGATGCATTCCTTGTAACCAAT...ATTTAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAATAAATACTGCAGCTTGAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CCA 90 bp GTGTTTCCATACAGTACAGGACTAAATGTGGCAACTGTGCATTGGAAAATTAATCTCGCAGATGAAAAGTaGCATCAAATACAGGATCAT +
Preference number: 4 (lower is better)
Translates to: VFPYSTGLNVATVHWKINLADEK*HQIQDH
Trigger: ATGATCCTGTATTTGATGCCACTTTTCATCTGCGAG...ATTAATTTTCCAATGCACAGTTGCCACATTTAGTCCTGTACTGTATGGAAACAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CCA 90 bp CATTTAGAAGCTTCCACTAAAAACTCAAGCTGCAGTATTTATTACAAGCTCTACCATAGTGCAAACGTTTaGGAAGGTGCTGTTTCAAGT +
Preference number: 4 (lower is better)
Translates to: HLEASTKNSSCSIYYKLYHSANV*EGAVSS
Trigger: ACTTGAAACAGCACCTTCCCAAACGTTTGCACTATG...GTAGAGCTTGTAATAAATACTGCAGCTTGAGTTTTTAGTGGAAGCTTCTAAATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CCA 90 bp ATTACAAGCTCTACTCAGAACACAAGGCTACCTAAATCAAGCATTAGAGAAAAAAATCCGTGGTCTCCCTaGAAAAAGCATTTTCCTGAT +
Preference number: 4 (lower is better)
Translates to: ITSSTQNTRLPKSSIREKNPWSP*KKHFPD
Trigger: ATCAGGAAAATGCTTTTTCCAGGGAGACCACGGATT...TTTTTCTCTAATGCTTGATTTAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAAT
38% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CCA 90 bp TTATTACAAGCTCTACTCAGAACACAAGGCTACCTAAATCAAGCATTAGAGAAAAATCCGTGGTCTCCCTaGAAAAAGCATTTTCCTGAT +
Preference number: 4 (lower is better)
Translates to: LLQALLRTQGYLNQALEKNPWSP*KKHFPD
Trigger: ATCAGGAAAATGCTTTTTCCAGGGAGACCACGGATT...TTTCTCTAATGCTTGATTTAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAATAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CCA 90 bp AATCTGCAGCACCATTTAGAAGCTTCCACTAAAAACTCAAGCTGCAGTATTTATTTGTTATCAAATCCGTaGTCTCCCTGGAAAAAGCAT +
Preference number: 4 (lower is better)
Translates to: NLQHHLEASTKNSSCSIYLLSNP*SPWKKH
Trigger: ATGCTTTTTCCAGGGAGACCACGGATTTGATAACAA...ATAAATACTGCAGCTTGAGTTTTTAGTGGAAGCTTCTAAATGGTGCTGCAGATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CCA 90 bp CCATACAGTACAGGACTAAATGTGGCAACTGTGCATTGGAAAATTAATATTTCCAAGGTACATAATCCCTaGATAATTGGGTCTGGTAAC +
Preference number: 4 (lower is better)
Translates to: PYSTGLNVATVHWKINISKVHNP*IIGSGN
Trigger: GTTACCAGACCCAATTATCCAGGGATTATGTACCTT...GGAAATATTAATTTTCCAATGCACAGTTGCCACATTTAGTCCTGTACTGTATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CCA 90 bp ATATCAAATCTGCAGCACCATTTAGAAGCTTCCACTAAAAACTCAAGCTGCAGTATCCAACTTGTTCTTTaGCTCTACCTTATCATCACA +
Preference number: 4 (lower is better)
Translates to: ISNLQHHLEASTKNSSCSIQLVL*LYLIIT
Trigger: TGTGATGATAAGGTAGAGCCAAAGAACAAGTTGGAT...ACTGCAGCTTGAGTTTTTAGTGGAAGCTTCTAAATGGTGCTGCAGATTTGATAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CCA 90 bp GTGTTTCCATACAGTACAGGACTAAATGTGGCAACTGTGCATTGGAAAATTAATAAACCTCAGCCTGTTTaGAAACAGTATATGATGTCC +
Preference number: 4 (lower is better)
Translates to: VFPYSTGLNVATVHWKINKPQPV*KQYMMS
Trigger: GGACATCATATACTGTTTCCAAACAGGCTGAGGTTT...ATTAATTTTCCAATGCACAGTTGCCACATTTAGTCCTGTACTGTATGGAAACAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CCA 90 bp GCTGCAGTATTTATTACAAGCTCTACTCAGAACACAAGGCTACCTAAATCAAGCACATTGGAACCATATTaGTTACAAGGAATGCATCAT +
Preference number: 4 (lower is better)
Translates to: AAVFITSSTQNTRLPKSSTLEPY*LQGMHH
Trigger: ATGATGCATTCCTTGTAACCAATATGGTTCCAATGT...GCTTGATTTAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAATAAATACTGCAGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CCA 90 bp CCATACAGTACAGGACTAAATGTGGCAACTGTGCATTGGAAAATTAATATTTCCGTCATAGTCGAAGATTaGTCCACTTATCACGTTAAC +
Preference number: 4 (lower is better)
Translates to: PYSTGLNVATVHWKINISVIVED*STYHVN
Trigger: GTTAACGTGATAAGTGGACCAATCTTCGACTATGAC...GGAAATATTAATTTTCCAATGCACAGTTGCCACATTTAGTCCTGTACTGTATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CCA 90 bp AATCTGCAGCACCATTTAGAAGCTTCCACTAAAAACTCAAGCTGCAGTATTTATTCTTCTTCTTTTCTTTaGAGGAGCAACTGGTCTTTC +
Preference number: 4 (lower is better)
Translates to: NLQHHLEASTKNSSCSIYSSSFL*RSNWSF
Trigger: GAAAGACCAGTTGCTCCTCCAAAGAAAAGAAGAAGA...ATAAATACTGCAGCTTGAGTTTTTAGTGGAAGCTTCTAAATGGTGCTGCAGATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259486.10
CDS-3UTR TCA 90 bp ACTAAAAACTCAAGCTGCAGTATTTATTACAAGCTCTACTCAGAACACAAGGCTTACAGGATCATACATTaGATTGCCAACAATTCCATG +
Preference number: 4 (lower is better)
Translates to: TKNSSCSIYYKLYSEHKAYRIIH*IANNSM
Trigger: CATGGAATTGTTGGCAATTCAATGTATGATCCTGTA...AGCCTTGTGTTCTGAGTAGAGCTTGTAATAAATACTGCAGCTTGAGTTTTTAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR TCA 90 bp ATTACAAGCTCTACTCAGAACACAAGGCTACCTAAATCAAGCATTAGAGAAAAATATGAAGCCGTTTGTTaGGTTCATCCAACTTGTTCT +
Preference number: 4 (lower is better)
Translates to: ITSSTQNTRLPKSSIREKYEAVC*VHPTCS
Trigger: AGAACAAGTTGGATGAACTCAACAAACGGCTTCATA...TTTTTCTCTAATGCTTGATTTAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR GCA 90 bp CCATACAGTACAGGACTAAATGTGGCAACTGTGCATTGGAAAATTAATATTTCCAGTCCATCCATTAATTaGCCCACAATTTTGTCGATT +
Preference number: 4 (lower is better)
Translates to: PYSTGLNVATVHWKINISSPSIN*PTILSI
Trigger: AATCGACAAAATTGTGGGGCAATTAATGGATGGACT...GGAAATATTAATTTTCCAATGCACAGTTGCCACATTTAGTCCTGTACTGTATGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR GCA 90 bp GTGTTTCCATACAGTACAGGACTAAATGTGGCAACTGTGCATTGGAAAATTAATAGTCCATCCATTAATTaGCCCACAATTTTGTCGATT +
Preference number: 4 (lower is better)
Translates to: VFPYSTGLNVATVHWKINSPSIN*PTILSI
Trigger: AATCGACAAAATTGTGGGGCAATTAATGGATGGACT...ATTAATTTTCCAATGCACAGTTGCCACATTTAGTCCTGTACTGTATGGAAACAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR GCA 90 bp GTGTTTCCATACAGTACAGGACTAAATGTGGCAACTGTGCATTGGAAAATTAATATTGGTTACAAGGAATaGATCATATTTAGCCTCTGG +
Preference number: 4 (lower is better)
Translates to: VFPYSTGLNVATVHWKINIGYKE*IIFSLW
Trigger: CCAGAGGCTAAATATGATGCATTCCTTGTAACCAAT...ATTAATTTTCCAATGCACAGTTGCCACATTTAGTCCTGTACTGTATGGAAACAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CCA 90 bp TTATTACAAGCTCTACTCAGAACACAAGGCTACCTAAATCAAGCATTAGAGAAACTCGCAGATGAAAAGTaGCATCAAATACAGGATCAT +
Preference number: 4 (lower is better)
Translates to: LLQALLRTQGYLNQALEKLADEK*HQIQDH
Trigger: ATGATCCTGTATTTGATGCCACTTTTCATCTGCGAG...TTTCTCTAATGCTTGATTTAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CCA 90 bp AGTACAGGACTAAATGTGGCAACTGTGCATTGGAAAATTAATATTTCCTCAATGCTCGCAGATGAAAAGTaGCATCAAATACAGGATCAT +
Preference number: 4 (lower is better)
Translates to: STGLNVATVHWKINISSMLADEK*HQIQDH
Trigger: ATGATCCTGTATTTGATGCCACTTTTCATCTGCGAG...CATTGAGGAAATATTAATTTTCCAATGCACAGTTGCCACATTTAGTCCTGTACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CCA 90 bp CATTTAGAAGCTTCCACTAAAAACTCAAGCTGCAGTATTTATTACAAGCTCTACTTGTTATCAAATCCGTaGTCTCCCTGGAAAAAGCAT +
Preference number: 4 (lower is better)
Translates to: HLEASTKNSSCSIYYKLYLLSNP*SPWKKH
Trigger: ATGCTTTTTCCAGGGAGACCACGGATTTGATAACAA...GTAGAGCTTGTAATAAATACTGCAGCTTGAGTTTTTAGTGGAAGCTTCTAAATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CCA 90 bp AGTACAGGACTAAATGTGGCAACTGTGCATTGGAAAATTAATATTTCCTCAATGTTGTTATCAAATCCGTaGTCTCCCTGGAAAAAGCAT +
Preference number: 4 (lower is better)
Translates to: STGLNVATVHWKINISSMLLSNP*SPWKKH
Trigger: ATGCTTTTTCCAGGGAGACCACGGATTTGATAACAA...CATTGAGGAAATATTAATTTTCCAATGCACAGTTGCCACATTTAGTCCTGTACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CCA 90 bp AGTACAGGACTAAATGTGGCAACTGTGCATTGGAAAATTAATATTTCCTCAATGAAACCTCAGCCTGTTTaGAAACAGTATATGATGTCC +
Preference number: 4 (lower is better)
Translates to: STGLNVATVHWKINISSMKPQPV*KQYMMS
Trigger: GGACATCATATACTGTTTCCAAACAGGCTGAGGTTT...CATTGAGGAAATATTAATTTTCCAATGCACAGTTGCCACATTTAGTCCTGTACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CCA 90 bp ATATCAAATCTGCAGCACCATTTAGAAGCTTCCACTAAAAACTCAAGCTGCAGTACATTGGAACCATATTaGTTACAAGGAATGCATCAT +
Preference number: 4 (lower is better)
Translates to: ISNLQHHLEASTKNSSCSTLEPY*LQGMHH
Trigger: ATGATGCATTCCTTGTAACCAATATGGTTCCAATGT...ACTGCAGCTTGAGTTTTTAGTGGAAGCTTCTAAATGGTGCTGCAGATTTGATAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CCA 90 bp CATTTAGAAGCTTCCACTAAAAACTCAAGCTGCAGTATTTATTACAAGCTCTACGTCATAGTCGAAGATTaGTCCACTTATCACGTTAAC +
Preference number: 4 (lower is better)
Translates to: HLEASTKNSSCSIYYKLYVIVED*STYHVN
Trigger: GTTAACGTGATAAGTGGACCAATCTTCGACTATGAC...GTAGAGCTTGTAATAAATACTGCAGCTTGAGTTTTTAGTGGAAGCTTCTAAATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR TCA 90 bp AGTACAGGACTAAATGTGGCAACTGTGCATTGGAAAATTAATATTTCCTCAATGTACAGGATCATACATTaGATTGCCAACAATTCCATG +
Preference number: 4 (lower is better)
Translates to: STGLNVATVHWKINISSMYRIIH*IANNSM
Trigger: CATGGAATTGTTGGCAATTCAATGTATGATCCTGTA...CATTGAGGAAATATTAATTTTCCAATGCACAGTTGCCACATTTAGTCCTGTACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR GCA 90 bp AGTACAGGACTAAATGTGGCAACTGTGCATTGGAAAATTAATATTTCCTCAATGATTGGTTACAAGGAATaGATCATATTTAGCCTCTGG +
Preference number: 4 (lower is better)
Translates to: STGLNVATVHWKINISSMIGYKE*IIFSLW
Trigger: CCAGAGGCTAAATATGATGCATTCCTTGTAACCAAT...CATTGAGGAAATATTAATTTTCCAATGCACAGTTGCCACATTTAGTCCTGTACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CCA 90 bp ATTACAAGCTCTACTCAGAACACAAGGCTACCTAAATCAAGCATTAGAGAAAAAATCCAACTTGTTCTTTaGCTCTACCTTATCATCACA +
Preference number: 4 (lower is better)
Translates to: ITSSTQNTRLPKSSIREKIQLVL*LYLIIT
Trigger: TGTGATGATAAGGTAGAGCCAAAGAACAAGTTGGAT...TTTTTCTCTAATGCTTGATTTAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAAT
36% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CCA 90 bp GTGTTTCCATACAGTACAGGACTAAATGTGGCAACTGTGCATTGGAAAATTAATACATTGGAACCATATTaGTTACAAGGAATGCATCAT +
Preference number: 4 (lower is better)
Translates to: VFPYSTGLNVATVHWKINTLEPY*LQGMHH
Trigger: ATGATGCATTCCTTGTAACCAATATGGTTCCAATGT...ATTAATTTTCCAATGCACAGTTGCCACATTTAGTCCTGTACTGTATGGAAACAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CCA 90 bp AGTACAGGACTAAATGTGGCAACTGTGCATTGGAAAATTAATATTTCCTCAATGGAAAGCAGGATACATTaGAACCATATTGGTTACAAG +
Preference number: 4 (lower is better)
Translates to: STGLNVATVHWKINISSMESRIH*NHIGYK
Trigger: CTTGTAACCAATATGGTTCCAATGTATCCTGCTTTC...CATTGAGGAAATATTAATTTTCCAATGCACAGTTGCCACATTTAGTCCTGTACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CCA 90 bp TTATTACAAGCTCTACTCAGAACACAAGGCTACCTAAATCAAGCATTAGAGAAAGAAAGCAGGATACATTaGAACCATATTGGTTACAAG +
Preference number: 4 (lower is better)
Translates to: LLQALLRTQGYLNQALEKESRIH*NHIGYK
Trigger: CTTGTAACCAATATGGTTCCAATGTATCCTGCTTTC...TTTCTCTAATGCTTGATTTAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAATAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CCA 90 bp GTGTTTCCATACAGTACAGGACTAAATGTGGCAACTGTGCATTGGAAAATTAATGTGGCAACTGTGCATTaGAAAATTAATATTTCCTCA +
Preference number: 4 (lower is better)
Translates to: VFPYSTGLNVATVHWKINVATVH*KINISS
Trigger: TGAGGAAATATTAATTTTCCAATGCACAGTTGCCAC...ATTAATTTTCCAATGCACAGTTGCCACATTTAGTCCTGTACTGTATGGAAACAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CCA 90 bp CATTTAGAAGCTTCCACTAAAAACTCAAGCTGCAGTATTTATTACAAGCTCTACGTGGCAACTGTGCATTaGAAAATTAATATTTCCTCA +
Preference number: 4 (lower is better)
Translates to: HLEASTKNSSCSIYYKLYVATVH*KINISS
Trigger: TGAGGAAATATTAATTTTCCAATGCACAGTTGCCAC...GTAGAGCTTGTAATAAATACTGCAGCTTGAGTTTTTAGTGGAAGCTTCTAAATG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CCA 90 bp AGTACAGGACTAAATGTGGCAACTGTGCATTGGAAAATTAATATTTCCTCAATGGTGGCAACTGTGCATTaGAAAATTAATATTTCCTCA +
Preference number: 4 (lower is better)
Translates to: STGLNVATVHWKINISSMVATVH*KINISS
Trigger: TGAGGAAATATTAATTTTCCAATGCACAGTTGCCAC...CATTGAGGAAATATTAATTTTCCAATGCACAGTTGCCACATTTAGTCCTGTACT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS GCA 90 bp GATCGGCGTGGCGGGTCATGCTGCGGGAGTCTCGGCGTCTGTTCCTaGCCGGGCGCTGCGGACGCGGCCTGGGCTGCAGCCCCGCGACCT +
Preference number: 5 (lower is better)
Translates to: DRRGGSCCGSLGVCS*PGAADAAWAAAPRP
Trigger: AGGTCGCGGGGCTGCAGCCCAGGCCGCGTCCGCAGCGCCCGGGCAGGAACAGACGCCGAGACTCCCGCAGCATGACCCGCCACGCCGATC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427067.6
CDS CCA 90 bp CTGCCCGGGCGCTGCGGACGCGGCCTGGGCTGCAGCCCCGCGACCTaGGAGCTGTGCTCGGGACGGCTGCTGCGGACTGCTCTTGTTTGC +
Preference number: 5 (lower is better)
Translates to: LPGRCGRGLGCSPAT*ELCSGRLLRTALVC
Trigger: GCAAACAAGAGCAGTCCGCAGCAGCCGTCCCGAGCACAGCTCCCAGGTCGCGGGGCTGCAGCCCAGGCCGCGTCCGCAGCGCCCGGGCAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427067.6
CDS GCA 90 bp GCCTGGGCTGCAGCCCCGCGACCTGGGAGCTGTGCTCGGGACGGCTaGTGCGGACTGCTCTTGTTTGCACTGGCCGTTTGCTTTTGGGAT +
Preference number: 5 (lower is better)
Translates to: AWAAAPRPGSCARDG*CGLLLFALAVCFWD
Trigger: ATCCCAAAAGCAAACGGCCAGTGCAAACAAGAGCAGTCCGCAGCAGCCGTCCCGAGCACAGCTCCCAGGTCGCGGGGCTGCAGCCCAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427067.6
CDS GCA 90 bp TGGGCTGCAGCCCCGCGACCTGGGAGCTGTGCTCGGGACGGCTGCTaGGGACTGCTCTTGTTTGCACTGGCCGTTTGCTTTTGGGATTTC +
Preference number: 5 (lower is better)
Translates to: WAAAPRPGSCARDGC*GLLLFALAVCFWDF
Trigger: GAAATCCCAAAAGCAAACGGCCAGTGCAAACAAGAGCAGTCCGCAGCAGCCGTCCCGAGCACAGCTCCCAGGTCGCGGGGCTGCAGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427067.6
CDS GCA 90 bp CAGCCCCGCGACCTGGGAGCTGTGCTCGGGACGGCTGCTGCGGACTaGTCTTGTTTGCACTGGCCGTTTGCTTTTGGGATTTCTCCAGTG +
Preference number: 5 (lower is better)
Translates to: QPRDLGAVLGTAAAD*SCLHWPFAFGISPV
Trigger: CACTGGAGAAATCCCAAAAGCAAACGGCCAGTGCAAACAAGAGCAGTCCGCAGCAGCCGTCCCGAGCACAGCTCCCAGGTCGCGGGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427067.6
CDS GCA 90 bp GCTCGGGACGGCTGCTGCGGACTGCTCTTGTTTGCACTGGCCGTTTaGTTTTGGGATTTCTCCAGTGCAGATGTAGTCAGGGGGCCGCTG +
Preference number: 5 (lower is better)
Translates to: ARDGCCGLLLFALAV*FWDFSSADVVRGPL
Trigger: CAGCGGCCCCCTGACTACATCTGCACTGGAGAAATCCCAAAAGCAAACGGCCAGTGCAAACAAGAGCAGTCCGCAGCAGCCGTCCCGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427067.6
CDS CCA 90 bp GACGGCTGCTGCGGACTGCTCTTGTTTGCACTGGCCGTTTGCTTTTaGGATTTCTCCAGTGCAGATGTAGTCAGGGGGCCGCTGTCCCGG +
Preference number: 5 (lower is better)
Translates to: DGCCGLLLFALAVCF*DFSSADVVRGPLSR
Trigger: CCGGGACAGCGGCCCCCTGACTACATCTGCACTGGAGAAATCCCAAAAGCAAACGGCCAGTGCAAACAAGAGCAGTCCGCAGCAGCCGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427067.6
CDS GCA 90 bp ACCTGGGAGCTGTGCTCGGGACGGCTGCTGCGGACTGCTCTTGTTTaGACTGGCCGTTTGCTTTTGGGATTTCTCCAGTGCAGATGTAGT +
Preference number: 5 (lower is better)
Translates to: TWELCSGRLLRTALV*TGRLLLGFLQCRCS
Trigger: ACTACATCTGCACTGGAGAAATCCCAAAAGCAAACGGCCAGTGCAAACAAGAGCAGTCCGCAGCAGCCGTCCCGAGCACAGCTCCCAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427067.6
CDS TCA 90 bp CCACGGGACAAGTTGTCACAGCGACAATCAGGAGGTCCAGCCTCTTaGAGTTCAAAGCACCTGCCCTTGCAAGATCCGGAGATGTTGGTC +
Preference number: 5 (lower is better)
Translates to: PRDKLSQRQSGGPAS*SSKHLPLQDPEMLV
Trigger: GACCAACATCTCCGGATCTTGCAAGGGCAGGTGCTTTGAACTTCAAGAGGCTGGACCTCCTGATTGTCGCTGTGACAACTTGTCCCGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520066.5
CDS CCA 90 bp CTGACACGACTGGAACGAGCTCCTCCTTGCCATGTCGAGGATTCTTaGAAAGCCTTTTGCAGCGTGTTCTCTTTGCCTTCACGGAGTGCA +
Preference number: 5 (lower is better)
Translates to: LTRLERAPPCHVEDS*KAFCSVFSLPSRSA
Trigger: TGCACTCCGTGAAGGCAAAGAGAACACGCTGCAAAAGGCTTTCCAAGAATCCTCGACATGGCAAGGAGGAGCTCGTTCCAGTCGTGTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000075322.11
CDS-3UTR CAA 90 bp GGCATGACTTTGCTGCCTTTCTTCATGTATGATGCACGGAAGCCATCCACGGAGGGAACGAGCTCCTCCTaGCCATGTCGAGGATTCTTG +
Preference number: 5 (lower is better)
Translates to: GMTLLPFFMYDARKPSTEGTSSS*PCRGFL
Trigger: CAAGAATCCTCGACATGGCAAGGAGGAGCTCGTTCC...CTCCGTGGATGGCTTCCGTGCATCATACATGAAGAAAGGCAGCAAAGTCATGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518958.1
CDS TCA 90 bp TGCCTTTCTTCATGTATGATGCACGGAAGCCATCCACGGAGAAGATaGTTAATGGAGGGCGAACAAACCCTGCAGGGCATTCTGCGGCCT +
Preference number: 5 (lower is better)
Translates to: CLSSCMMHGSHPRRR*LMEGEQTLQGILRP
Trigger: AGGCCGCAGAATGCCCTGCAGGGTTTGTTCGCCCTCCATTAATCATCTTCTCCGTGGATGGCTTCCGTGCATCATACATGAAGAAAGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
ENST00000520066.5
ENST00000522826.5
CDS CCA 90 bp CTCGCTCTCATATGTATGCAGGTATGTCTTGAGTGTCAGGATTTCTaGGTAGCTGCGGCTGGTCTTTCGGAAGAAGTCCAGGCTGGTGAG +
Preference number: 5 (lower is better)
Translates to: LALICMQVCLECQDF*VAAAGLSEEVQAGE
Trigger: CTCACCAGCCTGGACTTCTTCCGAAAGACCAGCCGCAGCTACCCAGAAATCCTGACACTCAAGACATACCTGCATACATATGAGAGCGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
ENST00000522167.5
ENST00000522826.5
ENST00000523861.1
CDS-3UTR CAA 90 bp AAAGGTTTTAGTTGGGTACACCGGCCTCATGTAGGGAGAGTGTGTGCCACAAGACCCCAGGAGATGCTTTaGTTCTTATGGGCCTCCTGC +
Preference number: 5 (lower is better)
Translates to: KGFSWVHRPHVGRVCATRPQEML*FLWASC
Trigger: GCAGGAGGCCCATAAGAACAAAAGCATCTCCTGGGG...TCTTGTGGCACACACTCTCCCTACATGAGGCCGGTGTACCCAACTAAAACCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518958.1
CDS TCA 90 bp CTCTTACACAAGTTGTCACAGCGACAATCAGGAGGTCCAGCCTCTTaGAGTTCAAAGCACCTGCCCTTGCAAGATCCGGAGATGTTGGTC +
Preference number: 5 (lower is better)
Translates to: LLHKLSQRQSGGPAS*SSKHLPLQDPEMLV
Trigger: GACCAACATCTCCGGATCTTGCAAGGGCAGGTGCTTTGAACTTCAAGAGGCTGGACCTCCTGATTGTCGCTGTGACAACTTGTGTAAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
ENST00000518958.1
ENST00000522826.5
CDS CCA 90 bp AAACTCGGAGAAACACGGACATCAGGCCGGACGCAACTGGTCAGATaGTCAGGAACGCTGGAAACCTCAGCCTGTTTGGAAACAGTATAT +
Preference number: 5 (lower is better)
Translates to: KLGETRTSGRTQLVR*SGTLETSACLETVY
Trigger: ATATACTGTTTCCAAACAGGCTGAGGTTTCCAGCGTTCCTGACCATCTGACCAGTTGCGTCCGGCCTGATGTCCGTGTTTCTCCGAGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
ENST00000522167.5
ENST00000522826.5
ENST00000523861.1
CDS-3UTR CAA 90 bp AGCCCAGTGGCCAAAGTGTATAAGTTAGGAAAGGTTTTAGTTGGGTACACCGGCCAAGATCCGGAGATGTaGGTCCAGGGGGAGTCTGAT +
Preference number: 5 (lower is better)
Translates to: SPVAKVYKLGKVLVGYTGQDPEM*VQGESD
Trigger: ATCAGACTCCCCCTGGACCAACATCTCCGGATCTTG...GCCGGTGTACCCAACTAAAACCTTTCCTAACTTATACACTTTGGCCACTGGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000518958.1
CDS CCA 90 bp GAGCGCCTTGGTTGTGCCAGACCTTGCGCTGTAGAATGGAGGTACTaGGCAAAGATGATTAAGATAGAGCTCTTACCCTCAAAGAGCTCA +
Preference number: 5 (lower is better)
Translates to: ERLGCARPCAVEWRY*AKMIKIELLPSKSS
Trigger: TGAGCTCTTTGAGGGTAAGAGCTCTATCTTAATCATCTTTGCCCAGTACCTCCATTCTACAGCGCAAGGTCTGGCACAACCAAGGCGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518109.1
CDS TCA 90 bp CACTTGGTAATTGGTACAGCAGTCTCCCCTGGCCAAGCAGTCCTCTaGGCAGTGACAGGCATTTTCTTCATTTCTGACTTCTCCACATCT +
Preference number: 5 (lower is better)
Translates to: HLVIGTAVSPGQAVL*AVTGIFFISDFSTS
Trigger: AGATGTGGAGAAGTCAGAAATGAAGAAAATGCCTGTCACTGCTCAGAGGACTGCTTGGCCAGGGGAGACTGCTGTACCAATTACCAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
ENST00000518958.1
ENST00000520066.5
ENST00000522826.5
CDS TCA 90 bp CGTAGGACATCTGCTTATCATTTTTGTAGGCCAAACAGTTCTGACTaGAACTCGGAGAAACACGGACATCAGGCCGGACGCAACTGGTCA +
Preference number: 5 (lower is better)
Translates to: RRTSAYHFCRPNSSD*NSEKHGHQAGRNWS
Trigger: TGACCAGTTGCGTCCGGCCTGATGTCCGTGTTTCTCCGAGTTTCAGTCAGAACTGTTTGGCCTACAAAAATGATAAGCAGATGTCCTACG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
ENST00000522167.5
ENST00000522826.5
ENST00000523861.1
CDS GCA 90 bp AGTGAACAGGGATATTATCTGACACGACTGGAACGAGCTCCTCCTTaGCATGTCGAGGATTCTTGGAAAGCCTTTTGCAGCGTGTTCTCT +
Preference number: 5 (lower is better)
Translates to: SEQGYYLTRLERAPP*HVEDSWKAFCSVFS
Trigger: AGAGAACACGCTGCAAAAGGCTTTCCAAGAATCCTCGACATGGCAAGGAGGAGCTCGTTCCAGTCGTGTCAGATAATATCCCTGTTCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000518958.1
CDS CCA 90 bp CACGGGCTGTCTTCAAACACAGCTCATCAAAGTCATGGCAGCAACTaGTATAGCTCTTACACAAGTTGTCACAGCGACAATCAGGAGGTC +
Preference number: 5 (lower is better)
Translates to: HGLSSNTAHQSHGSN*YSSYTSCHSDNQEV
Trigger: GACCTCCTGATTGTCGCTGTGACAACTTGTGTAAGAGCTATACCAGTTGCTGCCATGACTTTGATGAGCTGTGTTTGAAGACAGCCCGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
ENST00000518958.1
ENST00000522826.5
CDS TCA 90 bp TTCGTAGAATACTTTGCAAGACCCTCCCAGATAGAACTGCGGATTTaGGACAAAGCGGCCCACACTATTACAACACAAGCCTGTTCTGGG +
Preference number: 5 (lower is better)
Translates to: FVEYFARPSQIELRI*DKAAHTITTQACSG
Trigger: CCCAGAACAGGCTTGTGTTGTAATAGTGTGGGCCGCTTTGTCTCAAATCCGCAGTTCTATCTGGGAGGGTCTTGCAAAGTATTCTACGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523861.1
CDS CCA 90 bp ACAAGTGCAGCCCAGGTCAAAATCAGACTGAAGGTACATAATCCCTaGATAATTGGGTCTGGTAACTTCCTCTGGCATGGTTGGCCTGAA +
Preference number: 5 (lower is better)
Translates to: TSAAQVKIRLKVHNP*IIGSGNFLWHGWPE
Trigger: TTCAGGCCAACCATGCCAGAGGAAGTTACCAGACCCAATTATCCAGGGATTATGTACCTTCAGTCTGATTTTGACCTGGGCTGCACTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
ENST00000522167.5
ENST00000522826.5
CDS CCA 90 bp TCAAACATTGAGCGCCTTGGTTGTGCCAGACCTTGCGCTGTAGAATaGAGGTACTGGGCAAAGATGATTAAGATAGAGCTCTTACCCTCA +
Preference number: 5 (lower is better)
Translates to: SNIERLGCARPCAVE*RYWAKMIKIELLPS
Trigger: TGAGGGTAAGAGCTCTATCTTAATCATCTTTGCCCAGTACCTCCATTCTACAGCGCAAGGTCTGGCACAACCAAGGCGCTCAATGTTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518109.1
CDS CCA 90 bp GATTTGAGACAAAGCGGCCCACACTATTACAACACAAGCCTGTTCTaGGTAGTTCGGCTGCTCCAGCATTGCAGTAAATGTAGAAGCCTT +
Preference number: 5 (lower is better)
Translates to: DLRQSGPHYYNTSLF*VVRLLQHCSKCRSL
Trigger: AAGGCTTCTACATTTACTGCAATGCTGGAGCAGCCGAACTACCCAGAACAGGCTTGTGTTGTAATAGTGTGGGCCGCTTTGTCTCAAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523861.1
CDS-3UTR CAA 90 bp TTGAATTGCCAACAATTCCATGTGATTCTGGATATAGCCCAGTGGCCAAAGTGTAGGAGGTCCAGCCTCTaGAAGTTCAAAGCACCTGCC +
Preference number: 5 (lower is better)
Translates to: LNCQQFHVILDIAQWPKCRRSSL*KFKAPA
Trigger: GGCAGGTGCTTTGAACTTCAAGAGGCTGGACCTCCT...ACACTTTGGCCACTGGGCTATATCCAGAATCACATGGAATTGTTGGCAATTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518958.1
CDS CCA 90 bp CATAATCCCTGGATAATTGGGTCTGGTAACTTCCTCTGGCATGGTTaGCCTGAAGGTATTAGTGCGCAGGAGATGATTCAAACTTCCATG +
Preference number: 5 (lower is better)
Translates to: HNPWIIGSGNFLWHG*PEGISAQEMIQTSM
Trigger: CATGGAAGTTTGAATCATCTCCTGCGCACTAATACCTTCAGGCCAACCATGCCAGAGGAAGTTACCAGACCCAATTATCCAGGGATTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
ENST00000522167.5
ENST00000522826.5
CDS CCA 90 bp CTGAAGGTACATAATCCCTGGATAATTGGGTCTGGTAACTTCCTCTaGCATGGTTGGCCTGAAGGTATTAGTGCGCAGGAGATGATTCAA +
Preference number: 5 (lower is better)
Translates to: LKVHNPWIIGSGNFL*HGWPEGISAQEMIQ
Trigger: TTGAATCATCTCCTGCGCACTAATACCTTCAGGCCAACCATGCCAGAGGAAGTTACCAGACCCAATTATCCAGGGATTATGTACCTTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
ENST00000522167.5
ENST00000522826.5
CDS-3UTR CAA 90 bp GCTGCAGTATTTATTACAAGCTCTACTCAGAACACAAGGCTACCTAAATCAAGCCAAGATCCGGAGATGTaGGTCCAGGGGGAGTCTGAT +
Preference number: 5 (lower is better)
Translates to: AAVFITSSTQNTRLPKSSQDPEM*VQGESD
Trigger: ATCAGACTCCCCCTGGACCAACATCTCCGGATCTTG...GCTTGATTTAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAATAAATACTGCAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CAA 90 bp TCAGTGTTTCCATACAGTACAGGACTAAATGTGGCAACTGTGCATTGGAAAATTGGAACGAGCTCCTCCTaGCCATGTCGAGGATTCTTG +
Preference number: 5 (lower is better)
Translates to: SVFPYSTGLNVATVHWKIGTSSS*PCRGFL
Trigger: CAAGAATCCTCGACATGGCAAGGAGGAGCTCGTTCC...AATTTTCCAATGCACAGTTGCCACATTTAGTCCTGTACTGTATGGAAACACTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000075322.11
ENST00000259486.10
CDS-3UTR CAA 90 bp AAACTCAAGCTGCAGTATTTATTACAAGCTCTACTCAGAACACAAGGCTACCTAGGAACGAGCTCCTCCTaGCCATGTCGAGGATTCTTG +
Preference number: 5 (lower is better)
Translates to: KLKLQYLLQALLRTQGYLGTSSS*PCRGFL
Trigger: CAAGAATCCTCGACATGGCAAGGAGGAGCTCGTTCC...TAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAATAAATACTGCAGCTTGAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000075322.11
ENST00000259486.10
CDS-3UTR CAA 90 bp GCTGCAGTATTTATTACAAGCTCTACTCAGAACACAAGGCTACCTAAATCAAGCTCAAAGCACCTGCCCTaGCAAGATCCGGAGATGTTG +
Preference number: 5 (lower is better)
Translates to: AAVFITSSTQNTRLPKSSSKHLP*QDPEML
Trigger: CAACATCTCCGGATCTTGCAAGGGCAGGTGCTTTGA...GCTTGATTTAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAATAAATACTGCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CAA 90 bp AAACTCAAGCTGCAGTATTTATTACAAGCTCTACTCAGAACACAAGGCTACCTAAGGAGGTCCAGCCTCTaGAAGTTCAAAGCACCTGCC +
Preference number: 5 (lower is better)
Translates to: KLKLQYLLQALLRTQGYLRRSSL*KFKAPA
Trigger: GGCAGGTGCTTTGAACTTCAAGAGGCTGGACCTCCT...TAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAATAAATACTGCAGCTTGAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS TCA 90 bp TCTAAGTACAGAAGAGGGAAGTTCATCAGTTACCAAAGAACTCAATaGAGACCCCCAGTGCAGATTCAGACCTCCAAAGGAAAGCTCTCT +
Preference number: 5 (lower is better)
Translates to: SKYRRGKFISYQRTQ*RPPVQIQTSKGKLS
Trigger: AGAGAGCTTTCCTTTGGAGGTCTGAATCTGCACTGGGGGTCTTCATTGAGTTCTTTGGTAACTGATGAACTTCCCTCTTCTGTACTTAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523861.1
CDS GCA 90 bp TATTCTTCATCATCAAACATTGAGCGCCTTGGTTGTGCCAGACCTTaGGCTGTAGAATGGAGGTACTGGGCAAAGATGATTAAGATAGAG +
Preference number: 5 (lower is better)
Translates to: YSSSSNIERLGCARP*AVEWRYWAKMIKIE
Trigger: CTCTATCTTAATCATCTTTGCCCAGTACCTCCATTCTACAGCGCAAGGTCTGGCACAACCAAGGCGCTCAATGTTTGATGATGAAGAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518109.1
CDS GCA 90 bp CAGCATGAGTCAGCAACTCTACCCTTCACTGTATACCCTAGCATATaGGTGCAAGAAGACATTTCCAGTAATGTCTGTGGCAACATTGTT +
Preference number: 5 (lower is better)
Translates to: QHESATLPFTVYPSI*VQEDISSNVCGNIV
Trigger: AACAATGTTGCCACAGACATTACTGGAAATGTCTTCTTGCACGCATATGCTAGGGTATACAGTGAAGGGTAGAGTTGCTGACTCATGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523861.1
CDS-3UTR CAA 90 bp AATCTGCAGCACCATTTAGAAGCTTCCACTAAAAACTCAAGCTGCAGTATTTATCAAGATCCGGAGATGTaGGTCCAGGGGGAGTCTGAT +
Preference number: 5 (lower is better)
Translates to: NLQHHLEASTKNSSCSIYQDPEM*VQGESD
Trigger: ATCAGACTCCCCCTGGACCAACATCTCCGGATCTTG...ATAAATACTGCAGCTTGAGTTTTTAGTGGAAGCTTCTAAATGGTGCTGCAGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CAA 90 bp TGTGATTCTGGATATAGCCCAGTGGCCAAAGTGTATAAGTTAGGAAAGGTTTTATCAAAGCACCTGCCCTaGCAAGATCCGGAGATGTTG +
Preference number: 5 (lower is better)
Translates to: CDSGYSPVAKVYKLGKVLSKHLP*QDPEML
Trigger: CAACATCTCCGGATCTTGCAAGGGCAGGTGCTTTGA...TAAAACCTTTCCTAACTTATACACTTTGGCCACTGGGCTATATCCAGAATCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518958.1
CDS-3UTR CAA 90 bp AATCTGCAGCACCATTTAGAAGCTTCCACTAAAAACTCAAGCTGCAGTATTTATAGGAGGTCCAGCCTCTaGAAGTTCAAAGCACCTGCC +
Preference number: 5 (lower is better)
Translates to: NLQHHLEASTKNSSCSIYRRSSL*KFKAPA
Trigger: GGCAGGTGCTTTGAACTTCAAGAGGCTGGACCTCCT...ATAAATACTGCAGCTTGAGTTTTTAGTGGAAGCTTCTAAATGGTGCTGCAGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CAA 90 bp TCAGTGTTTCCATACAGTACAGGACTAAATGTGGCAACTGTGCATTGGAAAATTGCTTTCACCCCTTGCTaGGTGGCTGTAATCCATAGC +
Preference number: 5 (lower is better)
Translates to: SVFPYSTGLNVATVHWKIAFTPC*VAVIHS
Trigger: GCTATGGATTACAGCCACCAAGCAAGGGGTGAAAGC...AATTTTCCAATGCACAGTTGCCACATTTAGTCCTGTACTGTATGGAAACACTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CAA 90 bp CTGCAGTATTTATTACAAGCTCTACTCAGAACACAAGGCTACCTAAATCAAGCAGCTTTCACCCCTTGCTaGGTGGCTGTAATCCATAGC +
Preference number: 5 (lower is better)
Translates to: LQYLLQALLRTQGYLNQAAFTPC*VAVIHS
Trigger: GCTATGGATTACAGCCACCAAGCAAGGGGTGAAAGC...TGCTTGATTTAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAATAAATACTGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CAA 90 bp CTCAAGCTGCAGTATTTATTACAAGCTCTACTCAGAACACAAGGCTACCTAAATTCCAGCTTTCACCCCTaGCTTGGTGGCTGTAATCCA +
Preference number: 5 (lower is better)
Translates to: LKLQYLLQALLRTQGYLNSSFHP*LGGCNP
Trigger: TGGATTACAGCCACCAAGCAAGGGGTGAAAGCTGGA...ATTTAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAATAAATACTGCAGCTTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CAA 90 bp AGTACAGGACTAAATGTGGCAACTGTGCATTGGAAAATTAATATTTCCTCAATGTGCTGCGGACTGCTCTaGTTTGCACTGGCCGTTTGC +
Preference number: 5 (lower is better)
Translates to: STGLNVATVHWKINISSMCCGLL*FALAVC
Trigger: GCAAACGGCCAGTGCAAACAAGAGCAGTCCGCAGCA...CATTGAGGAAATATTAATTTTCCAATGCACAGTTGCCACATTTAGTCCTGTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427067.6
CDS GCA 90 bp TCTTCCATTCCATGGTCTCCGACAAAGATGACGTTGACACACCGATaGAGTTTTAGTTGTTTCAGTCCATCCATTAATTGCCCCACAATT +
Preference number: 5 (lower is better)
Translates to: SSIPWSPTKMTLTHR*SFSCFSPSINCPTI
Trigger: AATTGTGGGGCAATTAATGGATGGACTGAAACAACTAAAACTGCATCGGTGTGTCAACGTCATCTTTGTCGGAGACCATGGAATGGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
ENST00000522826.5
CDS GCA 90 bp TACCATTCTATGCAAGTAATGGAGAAAAGTCTTCGTAGAATACTTTaGAAGACCCTCCCAGATAGAACTGCGGATTTGAGACAAAGCGGC +
Preference number: 5 (lower is better)
Translates to: YHSMQVMEKSLRRIL*KTLPDRTADLRQSG
Trigger: GCCGCTTTGTCTCAAATCCGCAGTTCTATCTGGGAGGGTCTTGCAAAGTATTCTACGAAGACTTTTCTCCATTACTTGCATAGAATGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523861.1
CDS-3UTR CAA 90 bp ATATCAAATCTGCAGCACCATTTAGAAGCTTCCACTAAAAACTCAAGCTGCAGTCCATGTCGAGGATTCTaGGAAAGCCTTTTGCAGCGT +
Preference number: 5 (lower is better)
Translates to: ISNLQHHLEASTKNSSCSPCRGF*ESLLQR
Trigger: ACGCTGCAAAAGGCTTTCCAAGAATCCTCGACATGG...ACTGCAGCTTGAGTTTTTAGTGGAAGCTTCTAAATGGTGCTGCAGATTTGATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000075322.11
ENST00000259486.10
CDS-3UTR CAA 90 bp TGTGATTCTGGATATAGCCCAGTGGCCAAAGTGTATAAGTTAGGAAAGGTTTTACCATGTCGAGGATTCTaGGAAAGCCTTTTGCAGCGT +
Preference number: 5 (lower is better)
Translates to: CDSGYSPVAKVYKLGKVLPCRGF*ESLLQR
Trigger: ACGCTGCAAAAGGCTTTCCAAGAATCCTCGACATGG...TAAAACCTTTCCTAACTTATACACTTTGGCCACTGGGCTATATCCAGAATCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518958.1
CDS-3UTR CAA 90 bp ATTACAAGCTCTACTCAGAACACAAGGCTACCTAAATCAAGCATTAGAGAAAAACAAGATCCGGAGATGTaGGTCCAGGGGGAGTCTGAT +
Preference number: 5 (lower is better)
Translates to: ITSSTQNTRLPKSSIREKQDPEM*VQGESD
Trigger: ATCAGACTCCCCCTGGACCAACATCTCCGGATCTTG...TTTTTCTCTAATGCTTGATTTAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CAA 90 bp CCATACAGTACAGGACTAAATGTGGCAACTGTGCATTGGAAAATTAATATTTCCTCAAAGCACCTGCCCTaGCAAGATCCGGAGATGTTG +
Preference number: 5 (lower is better)
Translates to: PYSTGLNVATVHWKINISSKHLP*QDPEML
Trigger: CAACATCTCCGGATCTTGCAAGGGCAGGTGCTTTGA...GGAAATATTAATTTTCCAATGCACAGTTGCCACATTTAGTCCTGTACTGTATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CAA 90 bp AATCTGCAGCACCATTTAGAAGCTTCCACTAAAAACTCAAGCTGCAGTATTTATTCAAAGCACCTGCCCTaGCAAGATCCGGAGATGTTG +
Preference number: 5 (lower is better)
Translates to: NLQHHLEASTKNSSCSIYSKHLP*QDPEML
Trigger: CAACATCTCCGGATCTTGCAAGGGCAGGTGCTTTGA...ATAAATACTGCAGCTTGAGTTTTTAGTGGAAGCTTCTAAATGGTGCTGCAGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CAA 90 bp TTATTACAAGCTCTACTCAGAACACAAGGCTACCTAAATCAAGCATTAGAGAAAAGGAGGTCCAGCCTCTaGAAGTTCAAAGCACCTGCC +
Preference number: 5 (lower is better)
Translates to: LLQALLRTQGYLNQALEKRRSSL*KFKAPA
Trigger: GGCAGGTGCTTTGAACTTCAAGAGGCTGGACCTCCT...TTTCTCTAATGCTTGATTTAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CAA 90 bp CCATACAGTACAGGACTAAATGTGGCAACTGTGCATTGGAAAATTAATATTTCCGCTTTCACCCCTTGCTaGGTGGCTGTAATCCATAGC +
Preference number: 5 (lower is better)
Translates to: PYSTGLNVATVHWKINISAFTPC*VAVIHS
Trigger: GCTATGGATTACAGCCACCAAGCAAGGGGTGAAAGC...GGAAATATTAATTTTCCAATGCACAGTTGCCACATTTAGTCCTGTACTGTATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CAA 90 bp CTGCAGTATTTATTACAAGCTCTACTCAGAACACAAGGCTACCTAAATCAAGCATTTCCCTCAGAGGATTaGTCATCTCAGGGCCGAAAG +
Preference number: 5 (lower is better)
Translates to: LQYLLQALLRTQGYLNQAFPSED*SSQGRK
Trigger: CTTTCGGCCCTGAGATGACAAATCCTCTGAGGGAAA...TGCTTGATTTAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAATAAATACTGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000075322.11
ENST00000427067.6
CDS-3UTR CAA 90 bp AATCTGCAGCACCATTTAGAAGCTTCCACTAAAAACTCAAGCTGCAGTATTTATTCGTCCTCTGAGCTATaGCAGCTCTCCTCGTTGTCA +
Preference number: 5 (lower is better)
Translates to: NLQHHLEASTKNSSCSIYSSSEL*QLSSLS
Trigger: TGACAACGAGGAGAGCTGCAATAGCTCAGAGGACGA...ATAAATACTGCAGCTTGAGTTTTTAGTGGAAGCTTCTAAATGGTGCTGCAGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CAA 90 bp GTGTTTCCATACAGTACAGGACTAAATGTGGCAACTGTGCATTGGAAAATTAATTCGTCCTCTGAGCTATaGCAGCTCTCCTCGTTGTCA +
Preference number: 5 (lower is better)
Translates to: VFPYSTGLNVATVHWKINSSSEL*QLSSLS
Trigger: TGACAACGAGGAGAGCTGCAATAGCTCAGAGGACGA...ATTAATTTTCCAATGCACAGTTGCCACATTTAGTCCTGTACTGTATGGAAACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CAA 90 bp GCTGCAGTATTTATTACAAGCTCTACTCAGAACACAAGGCTACCTAAATCAAGCGTATGCAGGTATGTCTaGAGTGTCAGGATTTCTGGG +
Preference number: 5 (lower is better)
Translates to: AAVFITSSTQNTRLPKSSVCRYV*SVRISG
Trigger: CCCAGAAATCCTGACACTCAAGACATACCTGCATAC...GCTTGATTTAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAATAAATACTGCAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CAA 90 bp CTGCAGTATTTATTACAAGCTCTACTCAGAACACAAGGCTACCTAAATCAAGCAGTTTGCACTGGCCGTTaGCTTTTGGGATTTCTCCAG +
Preference number: 5 (lower is better)
Translates to: LQYLLQALLRTQGYLNQAVCTGR*LLGFLQ
Trigger: CTGGAGAAATCCCAAAAGCAAACGGCCAGTGCAAAC...TGCTTGATTTAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAATAAATACTGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427067.6
CDS-3UTR CAA 90 bp TGTGATTCTGGATATAGCCCAGTGGCCAAAGTGTATAAGTTAGGAAAGGTTTTATTCTTGGAAAGCCTTTaGCAGCGTGTTCTCTTTGCC +
Preference number: 5 (lower is better)
Translates to: CDSGYSPVAKVYKLGKVLFLESL*QRVLFA
Trigger: GGCAAAGAGAACACGCTGCAAAAGGCTTTCCAAGAA...TAAAACCTTTCCTAACTTATACACTTTGGCCACTGGGCTATATCCAGAATCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518958.1
CDS-3UTR CAA 90 bp AATCTGCAGCACCATTTAGAAGCTTCCACTAAAAACTCAAGCTGCAGTATTTATCCATGTCGAGGATTCTaGGAAAGCCTTTTGCAGCGT +
Preference number: 5 (lower is better)
Translates to: NLQHHLEASTKNSSCSIYPCRGF*ESLLQR
Trigger: ACGCTGCAAAAGGCTTTCCAAGAATCCTCGACATGG...ATAAATACTGCAGCTTGAGTTTTTAGTGGAAGCTTCTAAATGGTGCTGCAGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000075322.11
ENST00000259486.10
CDS-3UTR CAA 90 bp CCATCCACGGAGAAGATGATTAATGGAGGGCGAACAAACCTGTTATTATTCATTTCCTTTGCAAACCACTaGGTAATTGGTACAGCAGTC +
Preference number: 5 (lower is better)
Translates to: PSTEKMINGGRTNLLLFISFANH*VIGTAV
Trigger: GACTGCTGTACCAATTACCAAGTGGTTTGCAAAGGA...AATGAATAATAACAGGTTTGTTCGCCCTCCATTAATCATCTTCTCCGTGGATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518958.1
CDS-3UTR CAA 90 bp AGTACAGGACTAAATGTGGCAACTGTGCATTGGAAAATTAATATTTCCTCAATGTCCAGCTTTCACCCCTaGCTTGGTGGCTGTAATCCA +
Preference number: 5 (lower is better)
Translates to: STGLNVATVHWKINISSMSSFHP*LGGCNP
Trigger: TGGATTACAGCCACCAAGCAAGGGGTGAAAGCTGGA...CATTGAGGAAATATTAATTTTCCAATGCACAGTTGCCACATTTAGTCCTGTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CAA 90 bp TTATTACAAGCTCTACTCAGAACACAAGGCTACCTAAATCAAGCATTAGAGAAATCCAGCTTTCACCCCTaGCTTGGTGGCTGTAATCCA +
Preference number: 5 (lower is better)
Translates to: LLQALLRTQGYLNQALEKSSFHP*LGGCNP
Trigger: TGGATTACAGCCACCAAGCAAGGGGTGAAAGCTGGA...TTTCTCTAATGCTTGATTTAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CAA 90 bp AGGCAACTTTACAAAATCAGTGTTTCCATACAGTACAGGACTAAATGTGGCAACCCGAAAGGGCCATATTaGTGTCCAGAGAAATCAGGT +
Preference number: 5 (lower is better)
Translates to: RQLYKISVSIQYRTKCGNPKGPY*CPEKSG
Trigger: ACCTGATTTCTCTGGACACAAATATGGCCCTTTCGG...GTTGCCACATTTAGTCCTGTACTGTATGGAAACACTGATTTTGTAAAGTTGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CAA 90 bp CTCAAGCTGCAGTATTTATTACAAGCTCTACTCAGAACACAAGGCTACCTAAATCCGACAAAGATGACGTaGACACACCGATGCAGTTTT +
Preference number: 5 (lower is better)
Translates to: LKLQYLLQALLRTQGYLNPTKMT*THRCSF
Trigger: AAAACTGCATCGGTGTGTCAACGTCATCTTTGTCGG...ATTTAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAATAAATACTGCAGCTTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CAA 90 bp GCTGCAGTATTTATTACAAGCTCTACTCAGAACACAAGGCTACCTAAATCAAGCTGCATGCTGTTGACCTaGTTATCAAATCCGTGGTCT +
Preference number: 5 (lower is better)
Translates to: AAVFITSSTQNTRLPKSSCMLLT*LSNPWS
Trigger: AGACCACGGATTTGATAACAAGGTCAACAGCATGCA...GCTTGATTTAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAATAAATACTGCAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CAA 90 bp AAACTCAAGCTGCAGTATTTATTACAAGCTCTACTCAGAACACAAGGCTACCTATGCTGTAGTAGTGAGTaGGAACAGGAATGGAACTGC +
Preference number: 5 (lower is better)
Translates to: KLKLQYLLQALLRTQGYLCCSSE*EQEWNC
Trigger: GCAGTTCCATTCCTGTTCCAACTCACTACTACAGCA...TAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAATAAATACTGCAGCTTGAGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CAA 90 bp AGGCAACTTTACAAAATCAGTGTTTCCATACAGTACAGGACTAAATGTGGCAACTGCTGTAGTAGTGAGTaGGAACAGGAATGGAACTGC +
Preference number: 5 (lower is better)
Translates to: RQLYKISVSIQYRTKCGNCCSSE*EQEWNC
Trigger: GCAGTTCCATTCCTGTTCCAACTCACTACTACAGCA...GTTGCCACATTTAGTCCTGTACTGTATGGAAACACTGATTTTGTAAAGTTGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CAA 90 bp AGTACAGGACTAAATGTGGCAACTGTGCATTGGAAAATTAATATTTCCTCAATGTCGTCCTCTGAGCTATaGCAGCTCTCCTCGTTGTCA +
Preference number: 5 (lower is better)
Translates to: STGLNVATVHWKINISSMSSSEL*QLSSLS
Trigger: TGACAACGAGGAGAGCTGCAATAGCTCAGAGGACGA...CATTGAGGAAATATTAATTTTCCAATGCACAGTTGCCACATTTAGTCCTGTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CAA 90 bp AGGCAACTTTACAAAATCAGTGTTTCCATACAGTACAGGACTAAATGTGGCAACGTATGCAGGTATGTCTaGAGTGTCAGGATTTCTGGG +
Preference number: 5 (lower is better)
Translates to: RQLYKISVSIQYRTKCGNVCRYV*SVRISG
Trigger: CCCAGAAATCCTGACACTCAAGACATACCTGCATAC...GTTGCCACATTTAGTCCTGTACTGTATGGAAACACTGATTTTGTAAAGTTGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CAA 90 bp GTGTTTCCATACAGTACAGGACTAAATGTGGCAACTGTGCATTGGAAAATTAATACTGGCCGTTTGCTTTaGGGATTTCTCCAGTGCAGA +
Preference number: 5 (lower is better)
Translates to: VFPYSTGLNVATVHWKINTGRLL*GFLQCR
Trigger: TCTGCACTGGAGAAATCCCAAAAGCAAACGGCCAGT...ATTAATTTTCCAATGCACAGTTGCCACATTTAGTCCTGTACTGTATGGAAACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427067.6
CDS-3UTR CAA 90 bp ATTACAAGCTCTACTCAGAACACAAGGCTACCTAAATCAAGCATTAGAGAAAAAGCGGACTGCTCTTGTTaGCACTGGCCGTTTGCTTTT +
Preference number: 5 (lower is better)
Translates to: ITSSTQNTRLPKSSIREKADCSC*HWPFAF
Trigger: AAAAGCAAACGGCCAGTGCAAACAAGAGCAGTCCGC...TTTTTCTCTAATGCTTGATTTAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427067.6
CDS TCA 90 bp GACCTTGTTATCAAATCCGTGGTCTCCCTGGAAAAAGCATTTTCCTaGTGGTTTCTTATAAACATCCAAAGGTTTCCTTGCAACATGCCA +
Preference number: 5 (lower is better)
Translates to: DLVIKSVVSLEKAFS*WFLINIQRFPCNMP
Trigger: TGGCATGTTGCAAGGAAACCTTTGGATGTTTATAAGAAACCATCAGGAAAATGCTTTTTCCAGGGAGACCACGGATTTGATAACAAGGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
ENST00000522167.5
ENST00000522826.5
CDS GCA 90 bp TTGACACACCGATGCAGTTTTAGTTGTTTCAGTCCATCCATTAATTaGCCCACAATTTTGTCGATTTCCCTCAGAGGATTTGTCATCTCA +
Preference number: 5 (lower is better)
Translates to: LTHRCSFSCFSPSIN*PTILSISLRGFVIS
Trigger: TGAGATGACAAATCCTCTGAGGGAAATCGACAAAATTGTGGGGCAATTAATGGATGGACTGAAACAACTAAAACTGCATCGGTGTGTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000427067.6
ENST00000522826.5
CDS GCA 90 bp AAAGGGAGAGACAAACATAGCACAAATAACAGATGCCATGTGGTCTaGACCATATTAAAGATAGTTACAGAGTGTGATGGGAATGCAGAG +
Preference number: 5 (lower is better)
Translates to: KGRDKHSTNNRCHVV*TILKIVTECDGNAE
Trigger: CTCTGCATTCCCATCACACTCTGTAACTATCTTTAATATGGTGCAGACCACATGGCATCTGTTATTTGTGCTATGTTTGTCTCTCCCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518109.1
CDS-3UTR CAA 90 bp CCATACAGTACAGGACTAAATGTGGCAACTGTGCATTGGAAAATTAATATTTCCTTCTTGGAAAGCCTTTaGCAGCGTGTTCTCTTTGCC +
Preference number: 5 (lower is better)
Translates to: PYSTGLNVATVHWKINISFLESL*QRVLFA
Trigger: GGCAAAGAGAACACGCTGCAAAAGGCTTTCCAAGAA...GGAAATATTAATTTTCCAATGCACAGTTGCCACATTTAGTCCTGTACTGTATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000075322.11
ENST00000259486.10
CDS-3UTR CAA 90 bp CCATCCACGGAGAAGATGATTAATGGAGGGCGAACAAACCTGTTATTATTCATTAATCCTAAGCAGATATaGACTCCAACGGCAAAAGTG +
Preference number: 5 (lower is better)
Translates to: PSTEKMINGGRTNLLLFINPKQI*TPTAKV
Trigger: CACTTTTGCCGTTGGAGTCAATATCTGCTTAGGATT...AATGAATAATAACAGGTTTGTTCGCCCTCCATTAATCATCTTCTCCGTGGATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518958.1
CDS-3UTR CAA 90 bp ATATCAAATCTGCAGCACCATTTAGAAGCTTCCACTAAAAACTCAAGCTGCAGTTCCTTTGCAAACCACTaGGTAATTGGTACAGCAGTC +
Preference number: 5 (lower is better)
Translates to: ISNLQHHLEASTKNSSCSSFANH*VIGTAV
Trigger: GACTGCTGTACCAATTACCAAGTGGTTTGCAAAGGA...ACTGCAGCTTGAGTTTTTAGTGGAAGCTTCTAAATGGTGCTGCAGATTTGATAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CAA 90 bp CCATACAGTACAGGACTAAATGTGGCAACTGTGCATTGGAAAATTAATATTTCCCCGAAAGGGCCATATTaGTGTCCAGAGAAATCAGGT +
Preference number: 5 (lower is better)
Translates to: PYSTGLNVATVHWKINISPKGPY*CPEKSG
Trigger: ACCTGATTTCTCTGGACACAAATATGGCCCTTTCGG...GGAAATATTAATTTTCCAATGCACAGTTGCCACATTTAGTCCTGTACTGTATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CAA 90 bp ACTAAAAACTCAAGCTGCAGTATTTATTACAAGCTCTACTCAGAACACAAGGCTCCGAAAGGGCCATATTaGTGTCCAGAGAAATCAGGT +
Preference number: 5 (lower is better)
Translates to: TKNSSCSIYYKLYSEHKAPKGPY*CPEKSG
Trigger: ACCTGATTTCTCTGGACACAAATATGGCCCTTTCGG...AGCCTTGTGTTCTGAGTAGAGCTTGTAATAAATACTGCAGCTTGAGTTTTTAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CAA 90 bp ATTACAAGCTCTACTCAGAACACAAGGCTACCTAAATCAAGCATTAGAGAAAAATTTCCCTCAGAGGATTaGTCATCTCAGGGCCGAAAG +
Preference number: 5 (lower is better)
Translates to: ITSSTQNTRLPKSSIREKFPSED*SSQGRK
Trigger: CTTTCGGCCCTGAGATGACAAATCCTCTGAGGGAAA...TTTTTCTCTAATGCTTGATTTAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000075322.11
ENST00000427067.6
CDS-3UTR CAA 90 bp CTGCAGTATTTATTACAAGCTCTACTCAGAACACAAGGCTACCTAAATCAAGCAAATTGCCCCACAATTTaGTCGATTTCCCTCAGAGGA +
Preference number: 5 (lower is better)
Translates to: LQYLLQALLRTQGYLNQANCPTI*SISLRG
Trigger: TCCTCTGAGGGAAATCGACAAAATTGTGGGGCAATT...TGCTTGATTTAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAATAAATACTGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CAA 90 bp TCAGTGTTTCCATACAGTACAGGACTAAATGTGGCAACTGTGCATTGGAAAATTAATTGCCCCACAATTTaGTCGATTTCCCTCAGAGGA +
Preference number: 5 (lower is better)
Translates to: SVFPYSTGLNVATVHWKINCPTI*SISLRG
Trigger: TCCTCTGAGGGAAATCGACAAAATTGTGGGGCAATT...AATTTTCCAATGCACAGTTGCCACATTTAGTCCTGTACTGTATGGAAACACTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CAA 90 bp CCATACAGTACAGGACTAAATGTGGCAACTGTGCATTGGAAAATTAATATTTCCCATCCAAAGGTTTCCTaGCAACATGCCATCTGCGTT +
Preference number: 5 (lower is better)
Translates to: PYSTGLNVATVHWKINISHPKVS*QHAICV
Trigger: AACGCAGATGGCATGTTGCAAGGAAACCTTTGGATG...GGAAATATTAATTTTCCAATGCACAGTTGCCACATTTAGTCCTGTACTGTATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CAA 90 bp TCAGTGTTTCCATACAGTACAGGACTAAATGTGGCAACTGTGCATTGGAAAATTTTTCCCTCAGAGGATTaGTCATTTTGTCCTGACGAG +
Preference number: 5 (lower is better)
Translates to: SVFPYSTGLNVATVHWKIFPSED*SFCPDE
Trigger: CTCGTCAGGACAAAATGACAAATCCTCTGAGGGAAA...AATTTTCCAATGCACAGTTGCCACATTTAGTCCTGTACTGTATGGAAACACTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000259486.10
CDS-3UTR CAA 90 bp AATCTGCAGCACCATTTAGAAGCTTCCACTAAAAACTCAAGCTGCAGTATTTATTCCTTTGCAAACCACTaGGTAATTGGTACAGCAGTC +
Preference number: 5 (lower is better)
Translates to: NLQHHLEASTKNSSCSIYSFANH*VIGTAV
Trigger: GACTGCTGTACCAATTACCAAGTGGTTTGCAAAGGA...ATAAATACTGCAGCTTGAGTTTTTAGTGGAAGCTTCTAAATGGTGCTGCAGATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CAA 90 bp GTGTTTCCATACAGTACAGGACTAAATGTGGCAACTGTGCATTGGAAAATTAATTCCTTTGCAAACCACTaGGTAATTGGTACAGCAGTC +
Preference number: 5 (lower is better)
Translates to: VFPYSTGLNVATVHWKINSFANH*VIGTAV
Trigger: GACTGCTGTACCAATTACCAAGTGGTTTGCAAAGGA...ATTAATTTTCCAATGCACAGTTGCCACATTTAGTCCTGTACTGTATGGAAACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CAA 90 bp CTGCAGTATTTATTACAAGCTCTACTCAGAACACAAGGCTACCTAAATCAAGCATCCAGAGAAATCAGGTaGCTCAGAATAGAAGGCATA +
Preference number: 5 (lower is better)
Translates to: LQYLLQALLRTQGYLNQASREIR*LRIEGI
Trigger: TATGCCTTCTATTCTGAGCAACCTGATTTCTCTGGA...TGCTTGATTTAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAATAAATACTGCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CAA 90 bp AGTACAGGACTAAATGTGGCAACTGTGCATTGGAAAATTAATATTTCCTCAATGCCGACAAAGATGACGTaGACACACCGATGCAGTTTT +
Preference number: 5 (lower is better)
Translates to: STGLNVATVHWKINISSMPTKMT*THRCSF
Trigger: AAAACTGCATCGGTGTGTCAACGTCATCTTTGTCGG...CATTGAGGAAATATTAATTTTCCAATGCACAGTTGCCACATTTAGTCCTGTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CAA 90 bp GCTGCAGTATTTATTACAAGCTCTACTCAGAACACAAGGCTACCTAAATCAAGCTTGGCAATAATGGCTTaGGGGTCATATTTAGCATTG +
Preference number: 5 (lower is better)
Translates to: AAVFITSSTQNTRLPKSSLAIMA*GSYLAL
Trigger: CAATGCTAAATATGACCCCAAAGCCATTATTGCCAA...GCTTGATTTAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAATAAATACTGCAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CAA 90 bp ATATCAAATCTGCAGCACCATTTAGAAGCTTCCACTAAAAACTCAAGCTGCAGTTTTTTACACGTGAGATaGGCAATAATGGCTTTGGGG +
Preference number: 5 (lower is better)
Translates to: ISNLQHHLEASTKNSSCSFLHVR*AIMALG
Trigger: CCCCAAAGCCATTATTGCCAATCTCACGTGTAAAAA...ACTGCAGCTTGAGTTTTTAGTGGAAGCTTCTAAATGGTGCTGCAGATTTGATAT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CAA 90 bp CTGCAGTATTTATTACAAGCTCTACTCAGAACACAAGGCTACCTAAATCAAGCATTTTTACACGTGAGATaGGCAATAATGGCTTTGGGG +
Preference number: 5 (lower is better)
Translates to: LQYLLQALLRTQGYLNQAFLHVR*AIMALG
Trigger: CCCCAAAGCCATTATTGCCAATCTCACGTGTAAAAA...TGCTTGATTTAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAATAAATACTGCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CAA 90 bp AGTACAGGACTAAATGTGGCAACTGTGCATTGGAAAATTAATATTTCCTCAATGCATCCAAAGGTTTCCTaGCAACATGCCATCTGCGTT +
Preference number: 5 (lower is better)
Translates to: STGLNVATVHWKINISSMHPKVS*QHAICV
Trigger: AACGCAGATGGCATGTTGCAAGGAAACCTTTGGATG...CATTGAGGAAATATTAATTTTCCAATGCACAGTTGCCACATTTAGTCCTGTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CAA 90 bp ACTAAAAACTCAAGCTGCAGTATTTATTACAAGCTCTACTCAGAACACAAGGCTTGCATGCTGTTGACCTaGTTATCAAATCCGTGGTCT +
Preference number: 5 (lower is better)
Translates to: TKNSSCSIYYKLYSEHKACMLLT*LSNPWS
Trigger: AGACCACGGATTTGATAACAAGGTCAACAGCATGCA...AGCCTTGTGTTCTGAGTAGAGCTTGTAATAAATACTGCAGCTTGAGTTTTTAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CAA 90 bp AGGCAACTTTACAAAATCAGTGTTTCCATACAGTACAGGACTAAATGTGGCAACGGAGGCACTTTAGTCTaGTACTTAAATGTTGAGCCA +
Preference number: 5 (lower is better)
Translates to: RQLYKISVSIQYRTKCGNGGTLV*YLNVEP
Trigger: TGGCTCAACATTTAAGTACAAGACTAAAGTGCCTCC...GTTGCCACATTTAGTCCTGTACTGTATGGAAACACTGATTTTGTAAAGTTGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CAA 90 bp CTGCAGTATTTATTACAAGCTCTACTCAGAACACAAGGCTACCTAAATCAAGCAGGAGGCACTTTAGTCTaGTACTTAAATGTTGAGCCA +
Preference number: 5 (lower is better)
Translates to: LQYLLQALLRTQGYLNQAGGTLV*YLNVEP
Trigger: TGGCTCAACATTTAAGTACAAGACTAAAGTGCCTCC...TGCTTGATTTAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAATAAATACTGCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CAA 90 bp AAACTCAAGCTGCAGTATTTATTACAAGCTCTACTCAGAACACAAGGCTACCTACATCCAACTTGTTCTTaGGCTCTACCTTATCATCAC +
Preference number: 5 (lower is better)
Translates to: KLKLQYLLQALLRTQGYLHPTCS*ALPYHH
Trigger: GTGATGATAAGGTAGAGCCAAAGAACAAGTTGGATG...TAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAATAAATACTGCAGCTTGAGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CAA 90 bp ATATCAAATCTGCAGCACCATTTAGAAGCTTCCACTAAAAACTCAAGCTGCAGTGAAACCTCAGCCTGTTaGGAAACAGTATATGATGTC +
Preference number: 5 (lower is better)
Translates to: ISNLQHHLEASTKNSSCSETSAC*ETVYDV
Trigger: GACATCATATACTGTTTCCAAACAGGCTGAGGTTTC...ACTGCAGCTTGAGTTTTTAGTGGAAGCTTCTAAATGGTGCTGCAGATTTGATAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CAA 90 bp AATCTGCAGCACCATTTAGAAGCTTCCACTAAAAACTCAAGCTGCAGTATTTATCTTCACCAATACCCTTaGGAAATAATTCCAGACCCG +
Preference number: 5 (lower is better)
Translates to: NLQHHLEASTKNSSCSIYLHQYP*EIIPDP
Trigger: CGGGTCTGGAATTATTTCCAAAGGGTATTGGTGAAG...ATAAATACTGCAGCTTGAGTTTTTAGTGGAAGCTTCTAAATGGTGCTGCAGATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CAA 90 bp ATTACAAGCTCTACTCAGAACACAAGGCTACCTAAATCAAGCATTAGAGAAAAATGCTGTAGTAGTGAGTaGGAACAGGAATGGAACTGC +
Preference number: 5 (lower is better)
Translates to: ITSSTQNTRLPKSSIREKCCSSE*EQEWNC
Trigger: GCAGTTCCATTCCTGTTCCAACTCACTACTACAGCA...TTTTTCTCTAATGCTTGATTTAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CAA 90 bp ATTACAAGCTCTACTCAGAACACAAGGCTACCTAAATCAAGCATTAGAGAAAAAGTATGCAGGTATGTCTaGAGTGTCAGGATTTCTGGG +
Preference number: 5 (lower is better)
Translates to: ITSSTQNTRLPKSSIREKVCRYV*SVRISG
Trigger: CCCAGAAATCCTGACACTCAAGACATACCTGCATAC...TTTTTCTCTAATGCTTGATTTAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CAA 90 bp AATCTGCAGCACCATTTAGAAGCTTCCACTAAAAACTCAAGCTGCAGTATTTATAATCCTAAGCAGATATaGACTCCAACGGCAAAAGTG +
Preference number: 5 (lower is better)
Translates to: NLQHHLEASTKNSSCSIYNPKQI*TPTAKV
Trigger: CACTTTTGCCGTTGGAGTCAATATCTGCTTAGGATT...ATAAATACTGCAGCTTGAGTTTTTAGTGGAAGCTTCTAAATGGTGCTGCAGATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CAA 90 bp GTGTTTCCATACAGTACAGGACTAAATGTGGCAACTGTGCATTGGAAAATTAATAATCCTAAGCAGATATaGACTCCAACGGCAAAAGTG +
Preference number: 5 (lower is better)
Translates to: VFPYSTGLNVATVHWKINNPKQI*TPTAKV
Trigger: CACTTTTGCCGTTGGAGTCAATATCTGCTTAGGATT...ATTAATTTTCCAATGCACAGTTGCCACATTTAGTCCTGTACTGTATGGAAACAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CAA 90 bp AATCTGCAGCACCATTTAGAAGCTTCCACTAAAAACTCAAGCTGCAGTATTTATTCCAGAGAAATCAGGTaGCTCAGAATAGAAGGCATA +
Preference number: 5 (lower is better)
Translates to: NLQHHLEASTKNSSCSIYSREIR*LRIEGI
Trigger: TATGCCTTCTATTCTGAGCAACCTGATTTCTCTGGA...ATAAATACTGCAGCTTGAGTTTTTAGTGGAAGCTTCTAAATGGTGCTGCAGATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CAA 90 bp GTGTTTCCATACAGTACAGGACTAAATGTGGCAACTGTGCATTGGAAAATTAATTCCAGAGAAATCAGGTaGCTCAGAATAGAAGGCATA +
Preference number: 5 (lower is better)
Translates to: VFPYSTGLNVATVHWKINSREIR*LRIEGI
Trigger: TATGCCTTCTATTCTGAGCAACCTGATTTCTCTGGA...ATTAATTTTCCAATGCACAGTTGCCACATTTAGTCCTGTACTGTATGGAAACAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CAA 90 bp ATTACAAGCTCTACTCAGAACACAAGGCTACCTAAATCAAGCATTAGAGAAAAAAATTGCCCCACAATTTaGTCGATTTCCCTCAGAGGA +
Preference number: 5 (lower is better)
Translates to: ITSSTQNTRLPKSSIREKNCPTI*SISLRG
Trigger: TCCTCTGAGGGAAATCGACAAAATTGTGGGGCAATT...TTTTTCTCTAATGCTTGATTTAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAAT
39% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CAA 90 bp AAACTCAAGCTGCAGTATTTATTACAAGCTCTACTCAGAACACAAGGCTACCTATTGGCAATAATGGCTTaGGGGTCATATTTAGCATTG +
Preference number: 5 (lower is better)
Translates to: KLKLQYLLQALLRTQGYLLAIMA*GSYLAL
Trigger: CAATGCTAAATATGACCCCAAAGCCATTATTGCCAA...TAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAATAAATACTGCAGCTTGAGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CAA 90 bp CCATACAGTACAGGACTAAATGTGGCAACTGTGCATTGGAAAATTAATATTTCCTTTTTACACGTGAGATaGGCAATAATGGCTTTGGGG +
Preference number: 5 (lower is better)
Translates to: PYSTGLNVATVHWKINISFLHVR*AIMALG
Trigger: CCCCAAAGCCATTATTGCCAATCTCACGTGTAAAAA...GGAAATATTAATTTTCCAATGCACAGTTGCCACATTTAGTCCTGTACTGTATGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CAA 90 bp ATTACAAGCTCTACTCAGAACACAAGGCTACCTAAATCAAGCATTAGAGAAAAATGCATGCTGTTGACCTaGTTATCAAATCCGTGGTCT +
Preference number: 5 (lower is better)
Translates to: ITSSTQNTRLPKSSIREKCMLLT*LSNPWS
Trigger: AGACCACGGATTTGATAACAAGGTCAACAGCATGCA...TTTTTCTCTAATGCTTGATTTAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CAA 90 bp GTGTTTCCATACAGTACAGGACTAAATGTGGCAACTGTGCATTGGAAAATTAATCATCCAACTTGTTCTTaGGCTCTACCTTATCATCAC +
Preference number: 5 (lower is better)
Translates to: VFPYSTGLNVATVHWKINHPTCS*ALPYHH
Trigger: GTGATGATAAGGTAGAGCCAAAGAACAAGTTGGATG...ATTAATTTTCCAATGCACAGTTGCCACATTTAGTCCTGTACTGTATGGAAACAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CAA 90 bp TCAGTGTTTCCATACAGTACAGGACTAAATGTGGCAACTGTGCATTGGAAAATTTTGAGTTCATCCAACTaGTTCTTTGGCTCTACCTTA +
Preference number: 5 (lower is better)
Translates to: SVFPYSTGLNVATVHWKILSSSN*FFGSTL
Trigger: TAAGGTAGAGCCAAAGAACAAGTTGGATGAACTCAA...AATTTTCCAATGCACAGTTGCCACATTTAGTCCTGTACTGTATGGAAACACTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CAA 90 bp CTCAAGCTGCAGTATTTATTACAAGCTCTACTCAGAACACAAGGCTACCTAAATTTGAGTTCATCCAACTaGTTCTTTGGCTCTACCTTA +
Preference number: 5 (lower is better)
Translates to: LKLQYLLQALLRTQGYLNLSSSN*FFGSTL
Trigger: TAAGGTAGAGCCAAAGAACAAGTTGGATGAACTCAA...ATTTAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAATAAATACTGCAGCTTGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CAA 90 bp ATATCAAATCTGCAGCACCATTTAGAAGCTTCCACTAAAAACTCAAGCTGCAGTTTGAGTTCATCCAACTaGTTCTTTGGCTCTACCTTA +
Preference number: 5 (lower is better)
Translates to: ISNLQHHLEASTKNSSCSLSSSN*FFGSTL
Trigger: TAAGGTAGAGCCAAAGAACAAGTTGGATGAACTCAA...ACTGCAGCTTGAGTTTTTAGTGGAAGCTTCTAAATGGTGCTGCAGATTTGATAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CAA 90 bp ACTAAAAACTCAAGCTGCAGTATTTATTACAAGCTCTACTCAGAACACAAGGCTGAAACCTCAGCCTGTTaGGAAACAGTATATGATGTC +
Preference number: 5 (lower is better)
Translates to: TKNSSCSIYYKLYSEHKAETSAC*ETVYDV
Trigger: GACATCATATACTGTTTCCAAACAGGCTGAGGTTTC...AGCCTTGTGTTCTGAGTAGAGCTTGTAATAAATACTGCAGCTTGAGTTTTTAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CAA 90 bp GTGTTTCCATACAGTACAGGACTAAATGTGGCAACTGTGCATTGGAAAATTAATGAAACCTCAGCCTGTTaGGAAACAGTATATGATGTC +
Preference number: 5 (lower is better)
Translates to: VFPYSTGLNVATVHWKINETSAC*ETVYDV
Trigger: GACATCATATACTGTTTCCAAACAGGCTGAGGTTTC...ATTAATTTTCCAATGCACAGTTGCCACATTTAGTCCTGTACTGTATGGAAACAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CAA 90 bp ATTACAAGCTCTACTCAGAACACAAGGCTACCTAAATCAAGCATTAGAGAAAAACTTCACCAATACCCTTaGGAAATAATTCCAGACCCG +
Preference number: 5 (lower is better)
Translates to: ITSSTQNTRLPKSSIREKLHQYP*EIIPDP
Trigger: CGGGTCTGGAATTATTTCCAAAGGGTATTGGTGAAG...TTTTTCTCTAATGCTTGATTTAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CAA 90 bp CATTTAGAAGCTTCCACTAAAAACTCAAGCTGCAGTATTTATTACAAGCTCTACCTTCACCAATACCCTTaGGAAATAATTCCAGACCCG +
Preference number: 5 (lower is better)
Translates to: HLEASTKNSSCSIYYKLYLHQYP*EIIPDP
Trigger: CGGGTCTGGAATTATTTCCAAAGGGTATTGGTGAAG...GTAGAGCTTGTAATAAATACTGCAGCTTGAGTTTTTAGTGGAAGCTTCTAAATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CAA 90 bp CATTTAGAAGCTTCCACTAAAAACTCAAGCTGCAGTATTTATTACAAGCTCTACAATCCTAAGCAGATATaGACTCCAACGGCAAAAGTG +
Preference number: 5 (lower is better)
Translates to: HLEASTKNSSCSIYYKLYNPKQI*TPTAKV
Trigger: CACTTTTGCCGTTGGAGTCAATATCTGCTTAGGATT...GTAGAGCTTGTAATAAATACTGCAGCTTGAGTTTTTAGTGGAAGCTTCTAAATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CAA 90 bp TCAGTGTTTCCATACAGTACAGGACTAAATGTGGCAACTGTGCATTGGAAAATTGGATCATACATTGAATaGCCAACAATTCCATGTGAT +
Preference number: 5 (lower is better)
Translates to: SVFPYSTGLNVATVHWKIGSYIE*PTIPCD
Trigger: ATCACATGGAATTGTTGGCAATTCAATGTATGATCC...AATTTTCCAATGCACAGTTGCCACATTTAGTCCTGTACTGTATGGAAACACTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CAA 90 bp CTGCAGTATTTATTACAAGCTCTACTCAGAACACAAGGCTACCTAAATCAAGCAGGATCATACATTGAATaGCCAACAATTCCATGTGAT +
Preference number: 5 (lower is better)
Translates to: LQYLLQALLRTQGYLNQAGSYIE*PTIPCD
Trigger: ATCACATGGAATTGTTGGCAATTCAATGTATGATCC...TGCTTGATTTAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAATAAATACTGCAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CAA 90 bp TGTGATTCTGGATATAGCCCAGTGGCCAAAGTGTATAAGTTAGGAAAGGTTTTAGGATCATACATTGAATaGCCAACAATTCCATGTGAT +
Preference number: 5 (lower is better)
Translates to: CDSGYSPVAKVYKLGKVLGSYIE*PTIPCD
Trigger: ATCACATGGAATTGTTGGCAATTCAATGTATGATCC...TAAAACCTTTCCTAACTTATACACTTTGGCCACTGGGCTATATCCAGAATCACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518958.1
CDS-3UTR CAA 90 bp CTGCAGTATTTATTACAAGCTCTACTCAGAACACAAGGCTACCTAAATCAAGCAGCATTGTTGCTAAATTaGGATCGAATTCTTCCTAGA +
Preference number: 5 (lower is better)
Translates to: LQYLLQALLRTQGYLNQAALLLN*DRILPR
Trigger: TCTAGGAAGAATTCGATCCAAATTTAGCAACAATGC...TGCTTGATTTAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAATAAATACTGCAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CAA 90 bp ACTAAAAACTCAAGCTGCAGTATTTATTACAAGCTCTACTCAGAACACAAGGCTTTGGCAATAATGGCTTaGGGGTCATATTTAGCATTG +
Preference number: 5 (lower is better)
Translates to: TKNSSCSIYYKLYSEHKALAIMA*GSYLAL
Trigger: CAATGCTAAATATGACCCCAAAGCCATTATTGCCAA...AGCCTTGTGTTCTGAGTAGAGCTTGTAATAAATACTGCAGCTTGAGTTTTTAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CAA 90 bp AGTACAGGACTAAATGTGGCAACTGTGCATTGGAAAATTAATATTTCCTCAATGGGAGGCACTTTAGTCTaGTACTTAAATGTTGAGCCA +
Preference number: 5 (lower is better)
Translates to: STGLNVATVHWKINISSMGGTLV*YLNVEP
Trigger: TGGCTCAACATTTAAGTACAAGACTAAAGTGCCTCC...CATTGAGGAAATATTAATTTTCCAATGCACAGTTGCCACATTTAGTCCTGTACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CAA 90 bp TTATTACAAGCTCTACTCAGAACACAAGGCTACCTAAATCAAGCATTAGAGAAACATCCAACTTGTTCTTaGGCTCTACCTTATCATCAC +
Preference number: 5 (lower is better)
Translates to: LLQALLRTQGYLNQALEKHPTCS*ALPYHH
Trigger: GTGATGATAAGGTAGAGCCAAAGAACAAGTTGGATG...TTTCTCTAATGCTTGATTTAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAATAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS TCA 90 bp TTCAATGTTTTCAAATGGAGGCACTTTAGTCTTGTACTTAAATGTTaGGCCATAACCTACAAAAACAGTCTGCATGCTGTTGACCTTGTT +
Preference number: 5 (lower is better)
Translates to: FNVFKWRHFSLVLKC*AITYKNSLHAVDLV
Trigger: AACAAGGTCAACAGCATGCAGACTGTTTTTGTAGGTTATGGCTCAACATTTAAGTACAAGACTAAAGTGCCTCCATTTGAAAACATTGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
ENST00000522167.5
ENST00000522826.5
CDS-3UTR CAA 90 bp ACTAAAAACTCAAGCTGCAGTATTTATTACAAGCTCTACTCAGAACACAAGGCTGCATTGTTGCTAAATTaGGATCGAATTCTTCCTAGA +
Preference number: 5 (lower is better)
Translates to: TKNSSCSIYYKLYSEHKAALLLN*DRILPR
Trigger: TCTAGGAAGAATTCGATCCAAATTTAGCAACAATGC...AGCCTTGTGTTCTGAGTAGAGCTTGTAATAAATACTGCAGCTTGAGTTTTTAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CAA 90 bp TTATTACAAGCTCTACTCAGAACACAAGGCTACCTAAATCAAGCATTAGAGAAATTCTTCTTCTTTTCTTaGGAGGAGCAACTGGTCTTT +
Preference number: 5 (lower is better)
Translates to: LLQALLRTQGYLNQALEKFFFFS*EEQLVF
Trigger: AAAGACCAGTTGCTCCTCCAAAGAAAAGAAGAAGAA...TTTCTCTAATGCTTGATTTAGGTAGCCTTGTGTTCTGAGTAGAGCTTGTAATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259486.10
CDS-3UTR CAA 90 bp CATTTAGAAGCTTCCACTAAAAACTCAAGCTGCAGTATTTATTACAAGCTCTACGGATCATACATTGAATaGCCAACAATTCCATGTGAT +
Preference number: 5 (lower is better)
Translates to: HLEASTKNSSCSIYYKLYGSYIE*PTIPCD
Trigger: ATCACATGGAATTGTTGGCAATTCAATGTATGATCC...GTAGAGCTTGTAATAAATACTGCAGCTTGAGTTTTTAGTGGAAGCTTCTAAATG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS-3UTR CAA 90 bp CATTTAGAAGCTTCCACTAAAAACTCAAGCTGCAGTATTTATTACAAGCTCTACGCATTGTTGCTAAATTaGGATCGAATTCTTCCTAGA +
Preference number: 5 (lower is better)
Translates to: HLEASTKNSSCSIYYKLYALLLN*DRILPR
Trigger: TCTAGGAAGAATTCGATCCAAATTTAGCAACAATGC...GTAGAGCTTGTAATAAATACTGCAGCTTGAGTTTTTAGTGGAAGCTTCTAAATG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
CDS GCA 72 bp GCAGCCCCGCGACCTGGGAGCTGTGCTCGGGACGGCTaGTGCGGACTGCTCTTGTTTGCACTGGCCGTTTGC +
Preference number: 6 (lower is better)
Translates to: AAPRPGSCARDG*CGLLLFALAVC
Trigger: GCAAACGGCCAGTGCAAACAAGAGCAGTCCGCAGCAGCCGTCCCGAGCACAGCTCCCAGGTCGCGGGGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427067.6
CDS GCA 72 bp GCCCCGCGACCTGGGAGCTGTGCTCGGGACGGCTGCTaGGGACTGCTCTTGTTTGCACTGGCCGTTTGCTTT +
Preference number: 6 (lower is better)
Translates to: APRPGSCARDGC*GLLLFALAVCF
Trigger: AAAGCAAACGGCCAGTGCAAACAAGAGCAGTCCGCAGCAGCCGTCCCGAGCACAGCTCCCAGGTCGCGGGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427067.6
CDS GCA 72 bp ACAGGGATATTATCCGATCGGCGTGGCGGGTCATGCTaGGGGAGTCTCGGCGTCTGTTCCTGCCCGGGCGCT +
Preference number: 6 (lower is better)
Translates to: TGILSDRRGGSC*GSLGVCSCPGA
Trigger: AGCGCCCGGGCAGGAACAGACGCCGAGACTCCCGCAGCATGACCCGCCACGCCGATCGGATAATATCCCTGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427067.6
CDS CAA 90 bp GGACGGCTGCTGCGGACTGCTCTTGTTTGCACTGGCCGTTTGCTTTaGGGATTTCTCCAGTGCAGATGTAGTCAGGGGGCCGCTGTCCCG +
Preference number: 6 (lower is better)
Translates to: GRLLRTALVCTGRLL*GFLQCRCSQGAAVP
Trigger: CGGGACAGCGGCCCCCTGACTACATCTGCACTGGAGAAATCCCAAAAGCAAACGGCCAGTGCAAACAAGAGCAGTCCGCAGCAGCCGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427067.6
CDS CAA 90 bp CCGCGACCTGGGAGCTGTGCTCGGGACGGCTGCTGCGGACTGCTCTaGTTTGCACTGGCCGTTTGCTTTTGGGATTTCTCCAGTGCAGAT +
Preference number: 6 (lower is better)
Translates to: PRPGSCARDGCCGLL*FALAVCFWDFSSAD
Trigger: ATCTGCACTGGAGAAATCCCAAAAGCAAACGGCCAGTGCAAACAAGAGCAGTCCGCAGCAGCCGTCCCGAGCACAGCTCCCAGGTCGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427067.6
CDS GCA 72 bp GACCTGGGAGCTGTGCTCGGGACGGCTGCTGCGGACTaGTCTTGTTTGCACTGGCCGTTTGCTTTTGGGATT +
Preference number: 6 (lower is better)
Translates to: DLGAVLGTAAAD*SCLHWPFAFGI
Trigger: AATCCCAAAAGCAAACGGCCAGTGCAAACAAGAGCAGTCCGCAGCAGCCGTCCCGAGCACAGCTCCCAGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427067.6
CDS CAA 72 bp GGGAGCTGTGCTCGGGACGGCTGCTGCGGACTGCTCTaGTTTGCACTGGCCGTTTGCTTTTGGGATTTCTCC +
Preference number: 6 (lower is better)
Translates to: GSCARDGCCGLL*FALAVCFWDFS
Trigger: GGAGAAATCCCAAAAGCAAACGGCCAGTGCAAACAAGAGCAGTCCGCAGCAGCCGTCCCGAGCACAGCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427067.6
CDS CAA 90 bp TGCTCGGGACGGCTGCTGCGGACTGCTCTTGTTTGCACTGGCCGTTaGCTTTTGGGATTTCTCCAGTGCAGATGTAGTCAGGGGGCCGCT +
Preference number: 6 (lower is better)
Translates to: CSGRLLRTALVCTGR*LLGFLQCRCSQGAA
Trigger: AGCGGCCCCCTGACTACATCTGCACTGGAGAAATCCCAAAAGCAAACGGCCAGTGCAAACAAGAGCAGTCCGCAGCAGCCGTCCCGAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427067.6
CDS GCA 72 bp CTGTGCTCGGGACGGCTGCTGCGGACTGCTCTTGTTTaGACTGGCCGTTTGCTTTTGGGATTTCTCCAGTGC +
Preference number: 6 (lower is better)
Translates to: LCSGRLLRTALV*TGRLLLGFLQC
Trigger: GCACTGGAGAAATCCCAAAAGCAAACGGCCAGTGCAAACAAGAGCAGTCCGCAGCAGCCGTCCCGAGCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427067.6
CDS CAA 72 bp GCTGTGCTCGGGACGGCTGCTGCGGACTGCTCTTGTTaGCACTGGCCGTTTGCTTTTGGGATTTCTCCAGTG +
Preference number: 6 (lower is better)
Translates to: AVLGTAAADCSC*HWPFAFGISPV
Trigger: CACTGGAGAAATCCCAAAAGCAAACGGCCAGTGCAAACAAGAGCAGTCCGCAGCAGCCGTCCCGAGCACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427067.6
CDS CCA 72 bp AACTCGGAGAAACACGGACATCAGGCCGGACGCAACTaGTCAGATGGTCAGGAACGCTGGAAACCTCAGCCT +
Preference number: 6 (lower is better)
Translates to: NSEKHGHQAGRN*SDGQERWKPQP
Trigger: AGGCTGAGGTTTCCAGCGTTCCTGACCATCTGACCAGTTGCGTCCGGCCTGATGTCCGTGTTTCTCCGAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
ENST00000522167.5
ENST00000522826.5
ENST00000523861.1
CDS CCA 72 bp GAAACACGGACATCAGGCCGGACGCAACTGGTCAGATaGTCAGGAACGCTGGAAACCTCAGCCTGTTTGGAA +
Preference number: 6 (lower is better)
Translates to: ETRTSGRTQLVR*SGTLETSACLE
Trigger: TTCCAAACAGGCTGAGGTTTCCAGCGTTCCTGACCATCTGACCAGTTGCGTCCGGCCTGATGTCCGTGTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
ENST00000522167.5
ENST00000522826.5
ENST00000523861.1
CDS CCA 72 bp TGCGGACTGCTCTTGTTTGCACTGGCCGTTTGCTTTTaGGATTTCTCCAGTGCAGATGTAGTCAGGGGGCCG +
Preference number: 6 (lower is better)
Translates to: CGLLLFALAVCF*DFSSADVVRGP
Trigger: CGGCCCCCTGACTACATCTGCACTGGAGAAATCCCAAAAGCAAACGGCCAGTGCAAACAAGAGCAGTCCGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427067.6
CDS CAA 90 bp GCCACGGGACAAGTTGTCACAGCGACAATCAGGAGGTCCAGCCTCTaGAAGTTCAAAGCACCTGCCCTTGCAAGATCCGGAGATGTTGGT +
Preference number: 6 (lower is better)
Translates to: ATGQVVTATIRRSSL*KFKAPALARSGDVG
Trigger: ACCAACATCTCCGGATCTTGCAAGGGCAGGTGCTTTGAACTTCAAGAGGCTGGACCTCCTGATTGTCGCTGTGACAACTTGTCCCGTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520066.5
CDS CCA 72 bp CCCAATGCGACTCTCCTTTGCAAACCACTTGGTAATTaGTACAGCAGTCTCCCCTGGCCAAGCAGTCCTCTG +
Preference number: 6 (lower is better)
Translates to: PNATLLCKPLGN*YSSLPWPSSPL
Trigger: CAGAGGACTGCTTGGCCAGGGGAGACTGCTGTACCAATTACCAAGTGGTTTGCAAAGGAGAGTCGCATTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
ENST00000518958.1
ENST00000520066.5
ENST00000522826.5
CDS CAA 72 bp AGTTCAAAGCACCTGCCCTTGCAAGATCCGGAGATGTaGGTCCAGGGGGAGTCTGATAGCACTGTAGGAGGA +
Preference number: 6 (lower is better)
Translates to: SSKHLPLQDPEM*VQGESDSTVGG
Trigger: TCCTCCTACAGTGCTATCAGACTCCCCCTGGACCAACATCTCCGGATCTTGCAAGGGCAGGTGCTTTGAACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
ENST00000518958.1
ENST00000520066.5
ENST00000522826.5
CDS CAA 90 bp TCTGACACGACTGGAACGAGCTCCTCCTTGCCATGTCGAGGATTCTaGGAAAGCCTTTTGCAGCGTGTTCTCTTTGCCTTCACGGAGTGC +
Preference number: 6 (lower is better)
Translates to: SDTTGTSSSLPCRGF*ESLLQRVLFAFTEC
Trigger: GCACTCCGTGAAGGCAAAGAGAACACGCTGCAAAAGGCTTTCCAAGAATCCTCGACATGGCAAGGAGGAGCTCGTTCCAGTCGTGTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000075322.11
CDS CCA 72 bp CAGGCCGGACGCAACTGGTCAGATGGTCAGGAACGCTaGAAACCTCAGCCTGTTTGGAAACAGTATATGATG +
Preference number: 6 (lower is better)
Translates to: QAGRNWSDGQER*KPQPVWKQYMM
Trigger: CATCATATACTGTTTCCAAACAGGCTGAGGTTTCCAGCGTTCCTGACCATCTGACCAGTTGCGTCCGGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
ENST00000522167.5
ENST00000522826.5
ENST00000523861.1
CDS CAA 72 bp CAAGTTGTCACAGCGACAATCAGGAGGTCCAGCCTCTaGAAGTTCAAAGCACCTGCCCTTGCAAGATCCGGA +
Preference number: 6 (lower is better)
Translates to: QVVTATIRRSSL*KFKAPALARSG
Trigger: TCCGGATCTTGCAAGGGCAGGTGCTTTGAACTTCAAGAGGCTGGACCTCCTGATTGTCGCTGTGACAACTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
ENST00000518958.1
ENST00000520066.5
ENST00000522826.5
CDS CAA 90 bp GCTCTTACACAAGTTGTCACAGCGACAATCAGGAGGTCCAGCCTCTaGAAGTTCAAAGCACCTGCCCTTGCAAGATCCGGAGATGTTGGT +
Preference number: 6 (lower is better)
Translates to: ALTQVVTATIRRSSL*KFKAPALARSGDVG
Trigger: ACCAACATCTCCGGATCTTGCAAGGGCAGGTGCTTTGAACTTCAAGAGGCTGGACCTCCTGATTGTCGCTGTGACAACTTGTGTAAGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
ENST00000518958.1
ENST00000522826.5
CDS CAA 90 bp CTCCTCAGGGCCGAAAGGGCCATATTTGTGTCCAGAGAAATCAGGTaGCTCAGAATAGAAGGCATAGACCGAAGGCCTCTCATGATCTGG +
Preference number: 6 (lower is better)
Translates to: LLRAERAIFVSREIR*LRIEGIDRRPLMIW
Trigger: CCAGATCATGAGAGGCCTTCGGTCTATGCCTTCTATTCTGAGCAACCTGATTTCTCTGGACACAAATATGGCCCTTTCGGCCCTGAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259486.10
CDS TCA 72 bp AGGCATAGACCGAAGGCCTCTCATGATCTGGCAGGGTaGGCCACTGCAATATGGTTAATATTCTCCGCTCGT +
Preference number: 6 (lower is better)
Translates to: RHRPKASHDLAG*ATAIWLIFSAR
Trigger: ACGAGCGGAGAATATTAACCATATTGCAGTGGCTCACCCTGCCAGATCATGAGAGGCCTTCGGTCTATGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
ENST00000522826.5
CDS CCA 72 bp TGCAAACCACTTGGTAATTGGTACAGCAGTCTCCCCTaGCCAAGCAGTCCTCTGAGCAGTGACAGGCATTTT +
Preference number: 6 (lower is better)
Translates to: CKPLGNWYSSLP*PSSPLSSDRHF
Trigger: AAAATGCCTGTCACTGCTCAGAGGACTGCTTGGCCAGGGGAGACTGCTGTACCAATTACCAAGTGGTTTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
ENST00000518958.1
ENST00000520066.5
ENST00000522826.5
CDS CCA 72 bp GAGCGCCTTGGTTGTGCCAGACCTTGCGCTGTAGAATaGAGGTACTGGGCAAAGATGATTAAGATAGAGCTC +
Preference number: 6 (lower is better)
Translates to: ERLGCARPCAVE*RYWAKMIKIEL
Trigger: GAGCTCTATCTTAATCATCTTTGCCCAGTACCTCCATTCTACAGCGCAAGGTCTGGCACAACCAAGGCGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518109.1
CDS CAA 72 bp ACTGGAACGAGCTCCTCCTTGCCATGTCGAGGATTCTaGGAAAGCCTTTTGCAGCGTGTTCTCTTTGCCTTC +
Preference number: 6 (lower is better)
Translates to: TGTSSSLPCRGF*ESLLQRVLFAF
Trigger: GAAGGCAAAGAGAACACGCTGCAAAAGGCTTTCCAAGAATCCTCGACATGGCAAGGAGGAGCTCGTTCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000075322.11
ENST00000259486.10
CDS CAA 90 bp CATCTCAGGGCCGAAAGGGCCATATTTGTGTCCAGAGAAATCAGGTaGCTCAGAATAGAAGGCATAGACCGAAGGCCTCTCATGATCTGG +
Preference number: 6 (lower is better)
Translates to: HLRAERAIFVSREIR*LRIEGIDRRPLMIW
Trigger: CCAGATCATGAGAGGCCTTCGGTCTATGCCTTCTATTCTGAGCAACCTGATTTCTCTGGACACAAATATGGCCCTTTCGGCCCTGAGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000427067.6
ENST00000522826.5
CDS TCA 72 bp TCATGTATGATGCACGGAAGCCATCCACGGAGAAGATaGTTAATGGAGGGCGAACAAACCCTGCAGGGCATT +
Preference number: 6 (lower is better)
Translates to: SCMMHGSHPRRR*LMEGEQTLQGI
Trigger: AATGCCCTGCAGGGTTTGTTCGCCCTCCATTAATCATCTTCTCCGTGGATGGCTTCCGTGCATCATACATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
ENST00000520066.5
ENST00000522826.5
CDS GCA 72 bp GGATATTATCTGACACGACTGGAACGAGCTCCTCCTTaGCATGTCGAGGATTCTTGGAAAGCCTTTTGCAGC +
Preference number: 6 (lower is better)
Translates to: GYYLTRLERAPP*HVEDSWKAFCS
Trigger: GCTGCAAAAGGCTTTCCAAGAATCCTCGACATGGCAAGGAGGAGCTCGTTCCAGTCGTGTCAGATAATATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000518958.1
ENST00000520066.5
CDS CCA 72 bp CATAATCCCTGGATAATTGGGTCTGGTAACTTCCTCTaGCATGGTTGGCCTGAAGGTATTAGTGCGCAGGAG +
Preference number: 6 (lower is better)
Translates to: HNPWIIGSGNFL*HGWPEGISAQE
Trigger: CTCCTGCGCACTAATACCTTCAGGCCAACCATGCCAGAGGAAGTTACCAGACCCAATTATCCAGGGATTATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
ENST00000522167.5
ENST00000522826.5
CDS CCA 72 bp CAAAGCGGCCCACACTATTACAACACAAGCCTGTTCTaGGTAGTTCGGCTGCTCCAGCATTGCAGTAAATGT +
Preference number: 6 (lower is better)
Translates to: QSGPHYYNTSLF*VVRLLQHCSKC
Trigger: ACATTTACTGCAATGCTGGAGCAGCCGAACTACCCAGAACAGGCTTGTGTTGTAATAGTGTGGGCCGCTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523861.1
CDS CAA 72 bp GGGATATTATCTGACACGACTGGAACGAGCTCCTCCTaGCCATGTCGAGGATTCTTGGAAAGCCTTTTGCAG +
Preference number: 6 (lower is better)
Translates to: GILSDTTGTSSS*PCRGFLESLLQ
Trigger: CTGCAAAAGGCTTTCCAAGAATCCTCGACATGGCAAGGAGGAGCTCGTTCCAGTCGTGTCAGATAATATCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000518958.1
ENST00000520066.5
CDS TCA 72 bp TCTGCTTATCATTTTTGTAGGCCAAACAGTTCTGACTaGAACTCGGAGAAACACGGACATCAGGCCGGACGC +
Preference number: 6 (lower is better)
Translates to: SAYHFCRPNSSD*NSEKHGHQAGR
Trigger: GCGTCCGGCCTGATGTCCGTGTTTCTCCGAGTTTCAGTCAGAACTGTTTGGCCTACAAAAATGATAAGCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
ENST00000522167.5
ENST00000522826.5
ENST00000523861.1
CDS TCA 72 bp TACTTTGCAAGACCCTCCCAGATAGAACTGCGGATTTaGGACAAAGCGGCCCACACTATTACAACACAAGCC +
Preference number: 6 (lower is better)
Translates to: YFARPSQIELRI*DKAAHTITTQA
Trigger: GGCTTGTGTTGTAATAGTGTGGGCCGCTTTGTCTCAAATCCGCAGTTCTATCTGGGAGGGTCTTGCAAAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523861.1
CDS GCA 72 bp TCATCAAACATTGAGCGCCTTGGTTGTGCCAGACCTTaGGCTGTAGAATGGAGGTACTGGGCAAAGATGATT +
Preference number: 6 (lower is better)
Translates to: SSNIERLGCARP*AVEWRYWAKMI
Trigger: AATCATCTTTGCCCAGTACCTCCATTCTACAGCGCAAGGTCTGGCACAACCAAGGCGCTCAATGTTTGATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518109.1
CDS CCA 72 bp ATATGTATGCAGGTATGTCTTGAGTGTCAGGATTTCTaGGTAGCTGCGGCTGGTCTTTCGGAAGAAGTCCAG +
Preference number: 6 (lower is better)
Translates to: ICMQVCLECQDF*VAAAGLSEEVQ
Trigger: CTGGACTTCTTCCGAAAGACCAGCCGCAGCTACCCAGAAATCCTGACACTCAAGACATACCTGCATACATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
ENST00000522167.5
ENST00000522826.5
ENST00000523861.1
CDS CCA 72 bp CACGCTCAAAAGTGTATGACAAATATTCAGCCCTCATaGAAGAGACATGAAGAAGAAAGGGCGAGGGGCCCA +
Preference number: 6 (lower is better)
Translates to: HAQKCMTNIQPS*KRHEEERARGP
Trigger: TGGGCCCCTCGCCCTTTCTTCTTCATGTCTCTTCCATGAGGGCTGAATATTTGTCATACACTTTTGAGCGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000518109.1
CDS CCA 72 bp GGTTGTGCCAGACCTTGCGCTGTAGAATGGAGGTACTaGGCAAAGATGATTAAGATAGAGCTCTTACCCTCA +
Preference number: 6 (lower is better)
Translates to: GCARPCAVEWRY*AKMIKIELLPS
Trigger: TGAGGGTAAGAGCTCTATCTTAATCATCTTTGCCCAGTACCTCCATTCTACAGCGCAAGGTCTGGCACAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518109.1
CDS CAA 90 bp CTTCGTAGAATACTTTGCAAGACCCTCCCAGATAGAACTGCGGATTaGAGACAAAGCGGCCCACACTATTACAACACAAGCCTGTTCTGG +
Preference number: 6 (lower is better)
Translates to: LRRILCKTLPDRTAD*RQSGPHYYNTSLFW
Trigger: CCAGAACAGGCTTGTGTTGTAATAGTGTGGGCCGCTTTGTCTCAAATCCGCAGTTCTATCTGGGAGGGTCTTGCAAAGTATTCTACGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523861.1
CDS CCA 72 bp TGGATAATTGGGTCTGGTAACTTCCTCTGGCATGGTTaGCCTGAAGGTATTAGTGCGCAGGAGATGATTCAA +
Preference number: 6 (lower is better)
Translates to: WIIGSGNFLWHG*PEGISAQEMIQ
Trigger: TTGAATCATCTCCTGCGCACTAATACCTTCAGGCCAACCATGCCAGAGGAAGTTACCAGACCCAATTATCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
ENST00000522167.5
ENST00000522826.5
CDS CCA 72 bp GCCCAGGTCAAAATCAGACTGAAGGTACATAATCCCTaGATAATTGGGTCTGGTAACTTCCTCTGGCATGGT +
Preference number: 6 (lower is better)
Translates to: AQVKIRLKVHNP*IIGSGNFLWHG
Trigger: ACCATGCCAGAGGAAGTTACCAGACCCAATTATCCAGGGATTATGTACCTTCAGTCTGATTTTGACCTGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
ENST00000522167.5
ENST00000522826.5
CDS CAA 72 bp ATACTTTGCAAGACCCTCCCAGATAGAACTGCGGATTaGAGACAAAGCGGCCCACACTATTACAACACAAGC +
Preference number: 6 (lower is better)
Translates to: ILCKTLPDRTAD*RQSGPHYYNTS
Trigger: GCTTGTGTTGTAATAGTGTGGGCCGCTTTGTCTCAAATCCGCAGTTCTATCTGGGAGGGTCTTGCAAAGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523861.1
CDS CAA 90 bp CCTTCTGCTCTCTTAATTCGATGTGCAGTGAATCCTAAGCAGATATaGACTCCAACGGCAAAAGTGAACAGGGATATTATCCGATCGGCG +
Preference number: 6 (lower is better)
Translates to: PSALLIRCAVNPKQI*TPTAKVNRDIIRSA
Trigger: CGCCGATCGGATAATATCCCTGTTCACTTTTGCCGTTGGAGTCAATATCTGCTTAGGATTCACTGCACATCGAATTAAGAGAGCAGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427067.6
CDS TCA 72 bp GTGAGCCACTGCAATATGGTTAATATTCTCCGCTCGTaGGGGATGACAACAGACCAAAAGAATGTTCCAGCT +
Preference number: 6 (lower is better)
Translates to: VSHCNMVNILRS*GMTTDQKNVPA
Trigger: AGCTGGAACATTCTTTTGGTCTGTTGTCATCCCTCACGAGCGGAGAATATTAACCATATTGCAGTGGCTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
ENST00000522826.5
CDS TCA 72 bp AGAAGAGGGAAGTTCATCAGTTACCAAAGAACTCAATaGAGACCCCCAGTGCAGATTCAGACCTCCAAAGGA +
Preference number: 6 (lower is better)
Translates to: RRGKFISYQRTQ*RPPVQIQTSKG
Trigger: TCCTTTGGAGGTCTGAATCTGCACTGGGGGTCTTCATTGAGTTCTTTGGTAACTGATGAACTTCCCTCTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523861.1
CDS GCA 72 bp TCAGCAACTCTACCCTTCACTGTATACCCTAGCATATaGGTGCAAGAAGACATTTCCAGTAATGTCTGTGGC +
Preference number: 6 (lower is better)
Translates to: SATLPFTVYPSI*VQEDISSNVCG
Trigger: GCCACAGACATTACTGGAAATGTCTTCTTGCACGCATATGCTAGGGTATACAGTGAAGGGTAGAGTTGCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523861.1
CDS CAA 90 bp TGCAGTTTTAGTTGTTTCAGTCCATCCATTAATTGCCCCACAATTTaGTCGATTTCCCTCAGAGGATTTGTCATCTCAGGGCCGAAAGGG +
Preference number: 6 (lower is better)
Translates to: CSFSCFSPSINCPTI*SISLRGFVISGPKG
Trigger: CCCTTTCGGCCCTGAGATGACAAATCCTCTGAGGGAAATCGACAAAATTGTGGGGCAATTAATGGATGGACTGAAACAACTAAAACTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000427067.6
ENST00000522826.5
CDS GCA 72 bp CCATGGTCTCCGACAAAGATGACGTTGACACACCGATaGAGTTTTAGTTGTTTCAGTCCATCCATTAATTGC +
Preference number: 6 (lower is better)
Translates to: PWSPTKMTLTHR*SFSCFSPSINC
Trigger: GCAATTAATGGATGGACTGAAACAACTAAAACTGCATCGGTGTGTCAACGTCATCTTTGTCGGAGACCATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
ENST00000522826.5
CDS GCA 72 bp TCATCAGTTACCAAAGAACTCAATGAAGACCCCCAGTaGAGATTCAGACCTCCAAAGGAAAGCTCTCTTCTT +
Preference number: 6 (lower is better)
Translates to: SSVTKELNEDPQ*RFRPPKESSLL
Trigger: AAGAAGAGAGCTTTCCTTTGGAGGTCTGAATCTGCACTGGGGGTCTTCATTGAGTTCTTTGGTAACTGATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523861.1
CDS CCA 72 bp ACAGTCTGCATGCTGTTGACCTTGTTATCAAATCCGTaGTCTCCCTGGAAAAAGCATTTTCCTGATGGTTTC +
Preference number: 6 (lower is better)
Translates to: TVCMLLTLLSNP*SPWKKHFPDGF
Trigger: GAAACCATCAGGAAAATGCTTTTTCCAGGGAGACCACGGATTTGATAACAAGGTCAACAGCATGCAGACTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
ENST00000522167.5
ENST00000522826.5
CDS CAA 72 bp ACATCTTCCATTCCATGGTCTCCGACAAAGATGACGTaGACACACCGATGCAGTTTTAGTTGTTTCAGTCCA +
Preference number: 6 (lower is better)
Translates to: TSSIPWSPTKMT*THRCSFSCFSP
Trigger: TGGACTGAAACAACTAAAACTGCATCGGTGTGTCAACGTCATCTTTGTCGGAGACCATGGAATGGAAGATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
ENST00000522826.5
CDS TCA 72 bp TTCCAAATGTATCCATTATTCTTCATCATCAAACATTaGGCGCCTTGGTTGTGCCAGACCTTGCGCTGTAGA +
Preference number: 6 (lower is better)
Translates to: FQMYPLFFIIKH*APWLCQTLRCR
Trigger: TCTACAGCGCAAGGTCTGGCACAACCAAGGCGCTCAATGTTTGATGATGAAGAATAATGGATACATTTGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518109.1
CDS CAA 72 bp AGTTGTTTCAGTCCATCCATTAATTGCCCCACAATTTaGTCGATTTCCCTCAGAGGATTTGTCATCTCAGGG +
Preference number: 6 (lower is better)
Translates to: SCFSPSINCPTI*SISLRGFVISG
Trigger: CCCTGAGATGACAAATCCTCTGAGGGAAATCGACAAAATTGTGGGGCAATTAATGGATGGACTGAAACAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000075322.11
ENST00000427067.6
ENST00000522826.5
CDS TCA 72 bp ATTGGTTACAAGGAATGCATCATATTTAGCCTCTGGTaGAGAGCTCAGATAAGGAGGAAAGAGGAATCCGTA +
Preference number: 6 (lower is better)
Translates to: IGYKECIIFSLW*RAQIRRKEESV
Trigger: TACGGATTCCTCTTTCCTCCTTATCTGAGCTCTTCACCAGAGGCTAAATATGATGCATTCCTTGTAACCAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
ENST00000522167.5
ENST00000522826.5
ENST00000523861.1
CDS TCA 72 bp TCATGCCCGGCTGAGGTTATTGTTTATAATGAATTGTaGGACTGGTTTTGTCATATAAGGACACTGCCACCA +
Preference number: 6 (lower is better)
Translates to: SCPAEVIVYNEL*DWFCHIRTLPP
Trigger: TGGTGGCAGTGTCCTTATATGACAAAACCAGTCTCACAATTCATTATAAACAATAACCTCAGCCGGGCATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518109.1
CDS CAA 72 bp CTCTGCAATAAATACCTGGAGCTTGATCTGCCCACTTaGGATAGGCTAAAGTCAAAACTTCCACAGATTCTT +
Preference number: 6 (lower is better)
Translates to: LCNKYLELDLPT*DRLKSKLPQIL
Trigger: AAGAATCTGTGGAAGTTTTGACTTTAGCCTATCCAAAGTGGGCAGATCAAGCTCCAGGTATTTATTGCAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523861.1
CDS TCA 72 bp ATCAAATCCGTGGTCTCCCTGGAAAAAGCATTTTCCTaGTGGTTTCTTATAAACATCCAAAGGTTTCCTTGC +
Preference number: 6 (lower is better)
Translates to: IKSVVSLEKAFS*WFLINIQRFPC
Trigger: GCAAGGAAACCTTTGGATGTTTATAAGAAACCATCAGGAAAATGCTTTTTCCAGGGAGACCACGGATTTGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
ENST00000522167.5
ENST00000522826.5
CDS GCA 72 bp CGATGCAGTTTTAGTTGTTTCAGTCCATCCATTAATTaGCCCACAATTTTGTCGATTTCCCTCAGAGGATTT +
Preference number: 6 (lower is better)
Translates to: RCSFSCFSPSIN*PTILSISLRGF
Trigger: AAATCCTCTGAGGGAAATCGACAAAATTGTGGGGCAATTAATGGATGGACTGAAACAACTAAAACTGCATCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
ENST00000522826.5
CDS GCA 72 bp GACAAACATAGCACAAATAACAGATGCCATGTGGTCTaGACCATATTAAAGATAGTTACAGAGTGTGATGGG +
Preference number: 6 (lower is better)
Translates to: DKHSTNNRCHVV*TILKIVTECDG
Trigger: CCCATCACACTCTGTAACTATCTTTAATATGGTGCAGACCACATGGCATCTGTTATTTGTGCTATGTTTGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518109.1
CDS CAA 72 bp AGTTGTTTCAGTCCATCCATTAATTGCCCCACAATTTaGTCGATTTCCCTCAGAGGATTTGTCATTTTGTCC +
Preference number: 6 (lower is better)
Translates to: SCFSPSINCPTI*SISLRGFVILS
Trigger: GGACAAAATGACAAATCCTCTGAGGGAAATCGACAAAATTGTGGGGCAATTAATGGATGGACTGAAACAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259486.10
CDS TCA 72 bp ATCAAGCTAGTTTTCCTAACACTTTTGTGGTTGATCTaGTCACCTAACCATGGGTCAAGCTTTACAGTTATC +
Preference number: 6 (lower is better)
Translates to: IKLVFLTLLWLI*SPNHGSSFTVI
Trigger: GATAACTGTAAAGCTTGACCCATGGTTAGGTGATCAGATCAACCACAAAAGTGTTAGGAAAACTAGCTTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523861.1
CDS GCA 72 bp TATAAACATCCAAAGGTTTCCTTGCAACATGCCATCTaGGTTCCACCAATAAATGGATATCCTCAATTCTTC +
Preference number: 6 (lower is better)
Translates to: YKHPKVSLQHAI*VPPINGYPQFF
Trigger: GAAGAATTGAGGATATCCATTTATTGGTGGAACGCAGATGGCATGTTGCAAGGAAACCTTTGGATGTTTATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
ENST00000522167.5
ENST00000522826.5
CDS GCA 72 bp GTCAAAGGGAGAGACAAACATAGCACAAATAACAGATaGCATGTGGTCTGCACCATATTAAAGATAGTTACA +
Preference number: 6 (lower is better)
Translates to: VKGRDKHSTNNR*HVVCTILKIVT
Trigger: TGTAACTATCTTTAATATGGTGCAGACCACATGGCATCTGTTATTTGTGCTATGTTTGTCTCTCCCTTTGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518109.1
CDS TCA 72 bp TTCAAATGGAGGCACTTTAGTCTTGTACTTAAATGTTaGGCCATAACCTACAAAAACAGTCTGCATGCTGTT +
Preference number: 6 (lower is better)
Translates to: FKWRHFSLVLKC*AITYKNSLHAV
Trigger: AACAGCATGCAGACTGTTTTTGTAGGTTATGGCTCAACATTTAAGTACAAGACTAAAGTGCCTCCATTTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
ENST00000522167.5
ENST00000522826.5
CDS CAA 72 bp ATTTCTTTCCGAAGCATATTTCTTCACCAATACCCTTaGGAAATAATTCCAGACCCGTTTGAAAGCAGGATA +
Preference number: 6 (lower is better)
Translates to: ISFRSIFLHQYP*EIIPDPFESRI
Trigger: TATCCTGCTTTCAAACGGGTCTGGAATTATTTCCAAAGGGTATTGGTGAAGAAATATGCTTCGGAAAGAAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000075322.11
ENST00000259486.10
ENST00000427067.6
ENST00000522167.5
ENST00000522826.5
ENST00000523861.1