RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ENOX2 (Homo sapiens)

Ensembl gene IDs: ENSG00000165675

Ensembl transcript IDs: ENST00000338144.7, ENST00000338144.8, ENST00000370927.5, ENST00000370935.5, ENST00000394363.6, ENST00000432489.5, ENST00000492263.1

Found 557 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GTAGGGCAGGCCGGCAGGCTGGAAGTTCTGGCAGGAGTTGGATGTTaGAGTTTTGAGTCCAAAGGCAGTCTCGAAGCAGAATTCCCTCCT +
Preference number: 1 (lower is better)
Translates to: VGQAGRLEVLAGVGC*SFESKGSLEAEFPP
Trigger: AGGAGGGAATTCTGCTTCGAGACTGCCTTTGGACTCAAAACTGCAACATCCAACTCCTGCCAGAACTTCCAGCCTGCCGGCCTGCCCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394363.6
3UTR CCA 90 bp TGCCACAGCAGGGTGCTTCAGGGGGAAGCCAGTTTTCAGCACGAATaGGCTGCTGTGGAACCCTGTTTCCAGTTGTCAAGACAGACTTGG +
Preference number: 1 (lower is better)
Translates to: CHSRVLQGEASFQHE*AAVEPCFQLSRQTW
Trigger: CCAAGTCTGTCTTGACAACTGGAAACAGGGTTCCACAGCAGCCCATTCGTGCTGAAAACTGGCTTCCCCCTGAAGCACCCTGCTGTGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338144.7
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
3UTR GCA 90 bp CAGCAGGGTGCTTCAGGGGGAAGCCAGTTTTCAGCACGAATGGGCTaGTGTGGAACCCTGTTTCCAGTTGTCAAGACAGACTTGGCATCT +
Preference number: 1 (lower is better)
Translates to: QQGASGGSQFSARMG*CGTLFPVVKTDLAS
Trigger: AGATGCCAAGTCTGTCTTGACAACTGGAAACAGGGTTCCACAGCAGCCCATTCGTGCTGAAAACTGGCTTCCCCCTGAAGCACCCTGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338144.7
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
3UTR GCA 90 bp TCCACCAAGCAGAAGTTTCTGAATGGTCCACTCACATGCTGCCATTaGGATTTGCCGATGGGCACTACCAAGGTGTCTCTGGCAATTCGC +
Preference number: 1 (lower is better)
Translates to: STKQKFLNGPLTCCH*DLPMGTTKVSLAIR
Trigger: GCGAATTGCCAGAGACACCTTGGTAGTGCCCATCGGCAAATCGCAATGGCAGCATGTGAGTGGACCATTCAGAAACTTCTGCTTGGTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338144.7
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
3UTR GCA 90 bp TTACTTTCCACCAAGCAGAAGTTTCTGAATGGTCCACTCACATGCTaGCATTGCGATTTGCCGATGGGCACTACCAAGGTGTCTCTGGCA +
Preference number: 1 (lower is better)
Translates to: LLSTKQKFLNGPLTC*HCDLPMGTTKVSLA
Trigger: TGCCAGAGACACCTTGGTAGTGCCCATCGGCAAATCGCAATGGCAGCATGTGAGTGGACCATTCAGAAACTTCTGCTTGGTGGAAAGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338144.7
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
3UTR TCA 90 bp CAAACCTCCATCCTCTCTGTTTACTTTCCACCAAGCAGAAGTTTCTaGATGGTCCACTCACATGCTGCCATTGCGATTTGCCGATGGGCA +
Preference number: 1 (lower is better)
Translates to: QTSILSVYFPPSRSF*MVHSHAAIAICRWA
Trigger: TGCCCATCGGCAAATCGCAATGGCAGCATGTGAGTGGACCATTCAGAAACTTCTGCTTGGTGGAAAGTAAACAGAGAGGATGGAGGTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338144.7
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
3UTR GCA 90 bp TGTTTACTTTCCACCAAGCAGAAGTTTCTGAATGGTCCACTCACATaGTGCCATTGCGATTTGCCGATGGGCACTACCAAGGTGTCTCTG +
Preference number: 1 (lower is better)
Translates to: CLLSTKQKFLNGPLT*CHCDLPMGTTKVSL
Trigger: CAGAGACACCTTGGTAGTGCCCATCGGCAAATCGCAATGGCAGCATGTGAGTGGACCATTCAGAAACTTCTGCTTGGTGGAAAGTAAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338144.7
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
3UTR-3UTR GCA 90 bp CAGGGGGAAGCCAGTTTTCAGCACGAATGGGCTGCTGTGGAACCCTGTTTCCAGCTCACATGCTGCCATTaGGATTTGCCGATGGGCACT +
Preference number: 2 (lower is better)
Translates to: QGEASFQHEWAAVEPCFQLTCCH*DLPMGT
Trigger: AGTGCCCATCGGCAAATCGCAATGGCAGCATGTGAG...CTGGAAACAGGGTTCCACAGCAGCCCATTCGTGCTGAAAACTGGCTTCCCCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338144.7
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
3UTR-3UTR GCA 90 bp GCACGAATGGGCTGCTGTGGAACCCTGTTTCCAGTTGTCAAGACAGACTTGGCAGCTGCCATTGCGATTTaGCGATGGGCACTACCAAGG +
Preference number: 2 (lower is better)
Translates to: ARMGCCGTLFPVVKTDLAAAIAI*RWALPR
Trigger: CCTTGGTAGTGCCCATCGGCAAATCGCAATGGCAGC...TGCCAAGTCTGTCTTGACAACTGGAAACAGGGTTCCACAGCAGCCCATTCGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338144.7
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
3UTR-3UTR GCA 90 bp CAGGGGGAAGCCAGTTTTCAGCACGAATGGGCTGCTGTGGAACCCTGTTTCCAGAATGGTCCACTCACATaGTGCCATTGCGATTTGCCG +
Preference number: 2 (lower is better)
Translates to: QGEASFQHEWAAVEPCFQNGPLT*CHCDLP
Trigger: CGGCAAATCGCAATGGCAGCATGTGAGTGGACCATT...CTGGAAACAGGGTTCCACAGCAGCCCATTCGTGCTGAAAACTGGCTTCCCCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338144.7
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
3UTR-3UTR TCA 90 bp CAGGGGGAAGCCAGTTTTCAGCACGAATGGGCTGCTGTGGAACCCTGTTTCCAGTTGTCGTTTAAAAGGTaGACCTGGTCAGGCACCTTC +
Preference number: 2 (lower is better)
Translates to: QGEASFQHEWAAVEPCFQLSFKR*TWSGTF
Trigger: GAAGGTGCCTGACCAGGTTCACCTTTTAAACGACAA...CTGGAAACAGGGTTCCACAGCAGCCCATTCGTGCTGAAAACTGGCTTCCCCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000338144.7
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
3UTR-3UTR GCA 90 bp CAGGGGGAAGCCAGTTTTCAGCACGAATGGGCTGCTGTGGAACCCTGTTTCCAGAATAAAGACCATCTCTaGCTCAGGACATTCGCCCCA +
Preference number: 2 (lower is better)
Translates to: QGEASFQHEWAAVEPCFQNKDHL*LRTFAP
Trigger: TGGGGCGAATGTCCTGAGGCAGAGATGGTCTTTATT...CTGGAAACAGGGTTCCACAGCAGCCCATTCGTGCTGAAAACTGGCTTCCCCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000338144.7
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
3UTR-3UTR CCA 90 bp GCACGAATGGGCTGCTGTGGAACCCTGTTTCCAGTTGTCAAGACAGACTTGGCACTACCAAGGTGTCTCTaGCAATTCGCACTCCAGGTG +
Preference number: 2 (lower is better)
Translates to: ARMGCCGTLFPVVKTDLALPRCL*QFALQV
Trigger: CACCTGGAGTGCGAATTGCCAGAGACACCTTGGTAG...TGCCAAGTCTGTCTTGACAACTGGAAACAGGGTTCCACAGCAGCCCATTCGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338144.7
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
3UTR-3UTR TCA 90 bp CAGGGGGAAGCCAGTTTTCAGCACGAATGGGCTGCTGTGGAACCCTGTTTCCAGACAGCACTTGTGGTTTaGGGCAATTTCTCTTTAGGG +
Preference number: 2 (lower is better)
Translates to: QGEASFQHEWAAVEPCFQTALVV*GNFSLG
Trigger: CCCTAAAGAGAAATTGCCTCAAACCACAAGTGCTGT...CTGGAAACAGGGTTCCACAGCAGCCCATTCGTGCTGAAAACTGGCTTCCCCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338144.7
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
3UTR-3UTR GCA 90 bp GGCTGCTGTGGAACCCTGTTTCCAGTTGTCAAGACAGACTTGGCATCTTTTTCCGCTGCCATTGCGATTTaGCGATGGGCACTACCAAGG +
Preference number: 2 (lower is better)
Translates to: GCCGTLFPVVKTDLASFSAAIAI*RWALPR
Trigger: CCTTGGTAGTGCCCATCGGCAAATCGCAATGGCAGC...GGAAAAAGATGCCAAGTCTGTCTTGACAACTGGAAACAGGGTTCCACAGCAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338144.7
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
3UTR-3UTR GCA 90 bp GTTTTCAGCACGAATGGGCTGCTGTGGAACCCTGTTTCCAGTTGTCAAGACAGAGCTGCCATTGCGATTTaGCGATGGGCACTACCAAGG +
Preference number: 2 (lower is better)
Translates to: VFSTNGLLWNPVSSCQDRAAIAI*RWALPR
Trigger: CCTTGGTAGTGCCCATCGGCAAATCGCAATGGCAGC...TCTGTCTTGACAACTGGAAACAGGGTTCCACAGCAGCCCATTCGTGCTGAAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338144.7
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
3UTR-3UTR GCA 90 bp ACCACCACCACACACAATAAAGACCATCTCTGCCTCAGGACATTCGCCCCAAACCTCACATGCTGCCATTaGGATTTGCCGATGGGCACT +
Preference number: 2 (lower is better)
Translates to: TTTTHNKDHLCLRTFAPNLTCCH*DLPMGT
Trigger: AGTGCCCATCGGCAAATCGCAATGGCAGCATGTGAG...GTTTGGGGCGAATGTCCTGAGGCAGAGATGGTCTTTATTGTGTGTGGTGGTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338144.7
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
3UTR-3UTR GCA 90 bp TGCCTCAGGACATTCGCCCCAAACCTCCATCCTCTCTGTTTACTTTCCACCAAGGGTCCACTCACATGCTaGCATTGCGATTTGCCGATG +
Preference number: 2 (lower is better)
Translates to: CLRTFAPNLHPLCLLSTKGPLTC*HCDLPM
Trigger: CATCGGCAAATCGCAATGGCAGCATGTGAGTGGACC...CTTGGTGGAAAGTAAACAGAGAGGATGGAGGTTTGGGGCGAATGTCCTGAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338144.7
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
3UTR-3UTR GCA 90 bp GCACGAATGGGCTGCTGTGGAACCCTGTTTCCAGTTGTCAAGACAGACTTGGCAAATGGTCCACTCACATaGTGCCATTGCGATTTGCCG +
Preference number: 2 (lower is better)
Translates to: ARMGCCGTLFPVVKTDLANGPLT*CHCDLP
Trigger: CGGCAAATCGCAATGGCAGCATGTGAGTGGACCATT...TGCCAAGTCTGTCTTGACAACTGGAAACAGGGTTCCACAGCAGCCCATTCGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338144.7
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
3UTR CAA 90 bp AAGCAGAAGTTTCTGAATGGTCCACTCACATGCTGCCATTGCGATTaGCCGATGGGCACTACCAAGGTGTCTCTGGCAATTCGCACTCCA +
Preference number: 2 (lower is better)
Translates to: KQKFLNGPLTCCHCD*PMGTTKVSLAIRTP
Trigger: TGGAGTGCGAATTGCCAGAGACACCTTGGTAGTGCCCATCGGCAAATCGCAATGGCAGCATGTGAGTGGACCATTCAGAAACTTCTGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338144.7
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
3UTR CAA 90 bp TTCCACCAAGCAGAAGTTTCTGAATGGTCCACTCACATGCTGCCATaGCGATTTGCCGATGGGCACTACCAAGGTGTCTCTGGCAATTCG +
Preference number: 2 (lower is better)
Translates to: FHQAEVSEWSTHMLP*RFADGHYQGVSGNS
Trigger: CGAATTGCCAGAGACACCTTGGTAGTGCCCATCGGCAAATCGCAATGGCAGCATGTGAGTGGACCATTCAGAAACTTCTGCTTGGTGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338144.7
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
3UTR-3UTR TCA 90 bp CCACTCACATGCTGCCATTGCGATTTGCCGATGGGCACTACCAAGGTGTCTCTGACAGCACTTGTGGTTTaGGGCAATTTCTCTTTAGGG +
Preference number: 2 (lower is better)
Translates to: PLTCCHCDLPMGTTKVSLTALVV*GNFSLG
Trigger: CCCTAAAGAGAAATTGCCTCAAACCACAAGTGCTGT...CAGAGACACCTTGGTAGTGCCCATCGGCAAATCGCAATGGCAGCATGTGAGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338144.7
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
3UTR-3UTR TCA 90 bp CCTCAGGACATTCGCCCCAAACCTCCATCCTCTCTGTTTACTTTCCACCAAGCACACTCCAGGTGGAGCTaGCCTATTTGTAGAAAGCCT +
Preference number: 2 (lower is better)
Translates to: PQDIRPKPPSSLFTFHQAHSRWS*PICRKP
Trigger: AGGCTTTCTACAAATAGGTCAGCTCCACCTGGAGTG...TGCTTGGTGGAAAGTAAACAGAGAGGATGGAGGTTTGGGGCGAATGTCCTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338144.7
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
3UTR-3UTR TCA 90 bp GTTTCTGAATGGTCCACTCACATGCTGCCATTGCGATTTGCCGATGGGCACTACCACTCCAGGTGGAGCTaGCCTATTTGTAGAAAGCCT +
Preference number: 2 (lower is better)
Translates to: VSEWSTHMLPLRFADGHYHSRWS*PICRKP
Trigger: AGGCTTTCTACAAATAGGTCAGCTCCACCTGGAGTG...GTAGTGCCCATCGGCAAATCGCAATGGCAGCATGTGAGTGGACCATTCAGAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338144.7
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
3UTR-3UTR GCA 90 bp GCACGAATGGGCTGCTGTGGAACCCTGTTTCCAGTTGTCAAGACAGACTTGGCAAATAAAGACCATCTCTaGCTCAGGACATTCGCCCCA +
Preference number: 2 (lower is better)
Translates to: ARMGCCGTLFPVVKTDLANKDHL*LRTFAP
Trigger: TGGGGCGAATGTCCTGAGGCAGAGATGGTCTTTATT...TGCCAAGTCTGTCTTGACAACTGGAAACAGGGTTCCACAGCAGCCCATTCGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338144.7
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
3UTR-3UTR CCA 90 bp GGGCTGCTGTGGAACCCTGTTTCCAGTTGTCAAGACAGACTTGGCATCTTTTTCCTACCAAGGTGTCTCTaGCAATTCGCACTCCAGGTG +
Preference number: 2 (lower is better)
Translates to: GLLWNPVSSCQDRLGIFFLPRCL*QFALQV
Trigger: CACCTGGAGTGCGAATTGCCAGAGACACCTTGGTAG...GAAAAAGATGCCAAGTCTGTCTTGACAACTGGAAACAGGGTTCCACAGCAGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338144.7
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
3UTR-3UTR CCA 90 bp CCTCAGGACATTCGCCCCAAACCTCCATCCTCTCTGTTTACTTTCCACCAAGCAATTGCGATTTGCCGATaGGCACTACCAAGGTGTCTC +
Preference number: 2 (lower is better)
Translates to: PQDIRPKPPSSLFTFHQAIAICR*ALPRCL
Trigger: GAGACACCTTGGTAGTGCCCATCGGCAAATCGCAAT...TGCTTGGTGGAAAGTAAACAGAGAGGATGGAGGTTTGGGGCGAATGTCCTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338144.7
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
3UTR-3UTR GCA 90 bp CCCGAGACTGATGAATCAAAGCCTTCCGTAGCATTGATGAGAGATGCATCAGTGCTCACATGCTGCCATTaGGATTTGCCGATGGGCACT +
Preference number: 2 (lower is better)
Translates to: PETDESKPSVALMRDASVLTCCH*DLPMGT
Trigger: AGTGCCCATCGGCAAATCGCAATGGCAGCATGTGAG...CACTGATGCATCTCTCATCAATGCTACGGAAGGCTTTGATTCATCAGTCTCGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338144.7
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
3UTR-3UTR GCA 90 bp GGGCTGCTGTGGAACCCTGTTTCCAGTTGTCAAGACAGACTTGGCATCTTTTTCAATGGTCCACTCACATaGTGCCATTGCGATTTGCCG +
Preference number: 2 (lower is better)
Translates to: GLLWNPVSSCQDRLGIFFNGPLT*CHCDLP
Trigger: CGGCAAATCGCAATGGCAGCATGTGAGTGGACCATT...GAAAAAGATGCCAAGTCTGTCTTGACAACTGGAAACAGGGTTCCACAGCAGCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338144.7
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
3UTR-3UTR GCA 90 bp GCTGGCAAGTTAGAGATTTGTAGGGCAGGCCGGCAGGCTGGAAGTTCTGGCAGGTCCATTGGCTTTGCTTaGTCAGTACATTCTTTTATC +
Preference number: 2 (lower is better)
Translates to: AGKLEICRAGRQAGSSGRSIGFA*SVHSFI
Trigger: GATAAAAGAATGTACTGAGCAAGCAAAGCCAATGGA...CCTGCCAGAACTTCCAGCCTGCCGGCCTGCCCTACAAATCTCTAACTTGCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394363.6
3UTR-3UTR CCA 90 bp CCCGAGACTGATGAATCAAAGCCTTCCGTAGCATTGATGAGAGATGCATCAGTGCTACCAAGGTGTCTCTaGCAATTCGCACTCCAGGTG +
Preference number: 2 (lower is better)
Translates to: PETDESKPSVALMRDASVLPRCL*QFALQV
Trigger: CACCTGGAGTGCGAATTGCCAGAGACACCTTGGTAG...CACTGATGCATCTCTCATCAATGCTACGGAAGGCTTTGATTCATCAGTCTCGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338144.7
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
3UTR-3UTR TCA 90 bp GTTTCTGAATGGTCCACTCACATGCTGCCATTGCGATTTGCCGATGGGCACTACACAGCACTTGTGGTTTaGGGCAATTTCTCTTTAGGG +
Preference number: 2 (lower is better)
Translates to: VSEWSTHMLPLRFADGHYTALVV*GNFSLG
Trigger: CCCTAAAGAGAAATTGCCTCAAACCACAAGTGCTGT...GTAGTGCCCATCGGCAAATCGCAATGGCAGCATGTGAGTGGACCATTCAGAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338144.7
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
3UTR-3UTR TCA 90 bp TGCCTCAGGACATTCGCCCCAAACCTCCATCCTCTCTGTTTACTTTCCACCAAGACAGCACTTGTGGTTTaGGGCAATTTCTCTTTAGGG +
Preference number: 2 (lower is better)
Translates to: CLRTFAPNLHPLCLLSTKTALVV*GNFSLG
Trigger: CCCTAAAGAGAAATTGCCTCAAACCACAAGTGCTGT...CTTGGTGGAAAGTAAACAGAGAGGATGGAGGTTTGGGGCGAATGTCCTGAGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338144.7
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
3UTR-3UTR TCA 90 bp GTTTCTGAATGGTCCACTCACATGCTGCCATTGCGATTTGCCGATGGGCACTACTGCAATTCAACACACTaGCAACAGAAGCAAAGGGAC +
Preference number: 2 (lower is better)
Translates to: VSEWSTHMLPLRFADGHYCNSTH*QQKQRD
Trigger: GTCCCTTTGCTTCTGTTGTCAGTGTGTTGAATTGCA...GTAGTGCCCATCGGCAAATCGCAATGGCAGCATGTGAGTGGACCATTCAGAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338144.7
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
3UTR-3UTR TCA 90 bp CCTCAGGACATTCGCCCCAAACCTCCATCCTCTCTGTTTACTTTCCACCAAGCATGCAATTCAACACACTaGCAACAGAAGCAAAGGGAC +
Preference number: 2 (lower is better)
Translates to: PQDIRPKPPSSLFTFHQACNSTH*QQKQRD
Trigger: GTCCCTTTGCTTCTGTTGTCAGTGTGTTGAATTGCA...TGCTTGGTGGAAAGTAAACAGAGAGGATGGAGGTTTGGGGCGAATGTCCTGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338144.7
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
3UTR-3UTR TCA 90 bp GGCTGCTGTGGAACCCTGTTTCCAGTTGTCAAGACAGACTTGGCATCTTTTTCCCCAAGCAGAAGTTTCTaGATGGTCCACTCACATGCT +
Preference number: 2 (lower is better)
Translates to: GCCGTLFPVVKTDLASFSPSRSF*MVHSHA
Trigger: AGCATGTGAGTGGACCATTCAGAAACTTCTGCTTGG...GGAAAAAGATGCCAAGTCTGTCTTGACAACTGGAAACAGGGTTCCACAGCAGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338144.7
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
3UTR-3UTR TCA 90 bp AGTCCAAAGGCAGTCTCGAAGCAGAATTCCCTCCTCAGGGGACTTCAGTCTTTTAGTGTAAAATTAACCTaGGCTTCCTGCTGGTGCCAC +
Preference number: 2 (lower is better)
Translates to: SPKAVSKQNSLLRGLQSFSVKLT*ASCWCH
Trigger: GTGGCACCAGCAGGAAGCTCAGGTTAATTTTACACT...AAAAGACTGAAGTCCCCTGAGGAGGGAATTCTGCTTCGAGACTGCCTTTGGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394363.6
3UTR-3UTR GCA 90 bp GCTGGCAAGTTAGAGATTTGTAGGGCAGGCCGGCAGGCTGGAAGTTCTGGCAGGAAGGGAGGGTATGCTTaGATTATTATAAATACCACA +
Preference number: 2 (lower is better)
Translates to: AGKLEICRAGRQAGSSGRKGGYA*IIINTT
Trigger: TGTGGTATTTATAATAATGCAAGCATACCCTCCCTT...CCTGCCAGAACTTCCAGCCTGCCGGCCTGCCCTACAAATCTCTAACTTGCCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394363.6
3UTR-3UTR CCA 90 bp CCTCAGGACATTCGCCCCAAACCTCCATCCTCTCTGTTTACTTTCCACCAAGCATGGTCTACTGGGGATTaGAAAGACAATGGCAGTTAC +
Preference number: 2 (lower is better)
Translates to: PQDIRPKPPSSLFTFHQAWSTGD*KDNGSY
Trigger: GTAACTGCCATTGTCTTTCCAATCCCCAGTAGACCA...TGCTTGGTGGAAAGTAAACAGAGAGGATGGAGGTTTGGGGCGAATGTCCTGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338144.7
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
3UTR-3UTR CCA 90 bp CCCGAGACTGATGAATCAAAGCCTTCCGTAGCATTGATGAGAGATGCATCAGTGATTGCGATTTGCCGATaGGCACTACCAAGGTGTCTC +
Preference number: 2 (lower is better)
Translates to: PETDESKPSVALMRDASVIAICR*ALPRCL
Trigger: GAGACACCTTGGTAGTGCCCATCGGCAAATCGCAAT...CACTGATGCATCTCTCATCAATGCTACGGAAGGCTTTGATTCATCAGTCTCGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338144.7
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
3UTR-3UTR CCA 90 bp GGCTGCTGTGGAACCCTGTTTCCAGTTGTCAAGACAGACTTGGCATCTTTTTCCGCAGAAGTTTCTGAATaGTCCACTCACATGCTGCCA +
Preference number: 2 (lower is better)
Translates to: GCCGTLFPVVKTDLASFSAEVSE*STHMLP
Trigger: TGGCAGCATGTGAGTGGACCATTCAGAAACTTCTGC...GGAAAAAGATGCCAAGTCTGTCTTGACAACTGGAAACAGGGTTCCACAGCAGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338144.7
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
3UTR-3UTR CCA 90 bp GTTTTCAGCACGAATGGGCTGCTGTGGAACCCTGTTTCCAGTTGTCAAGACAGAGCAGAAGTTTCTGAATaGTCCACTCACATGCTGCCA +
Preference number: 2 (lower is better)
Translates to: VFSTNGLLWNPVSSCQDRAEVSE*STHMLP
Trigger: TGGCAGCATGTGAGTGGACCATTCAGAAACTTCTGC...TCTGTCTTGACAACTGGAAACAGGGTTCCACAGCAGCCCATTCGTGCTGAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338144.7
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
3UTR-3UTR CCA 90 bp CAGGGGGAAGCCAGTTTTCAGCACGAATGGGCTGCTGTGGAACCCTGTTTCCAGTTGTCAAGACAGACTTaGCATCTTTTTCCAACATTC +
Preference number: 2 (lower is better)
Translates to: QGEASFQHEWAAVEPCFQLSRQT*HLFPTF
Trigger: GAATGTTGGAAAAAGATGCCAAGTCTGTCTTGACAA...CTGGAAACAGGGTTCCACAGCAGCCCATTCGTGCTGAAAACTGGCTTCCCCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000338144.7
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
3UTR-3UTR CCA 90 bp CCCGAGACTGATGAATCAAAGCCTTCCGTAGCATTGATGAGAGATGCATCAGTGACGAATGGGCTGCTGTaGAACCCTGTTTCCAGTTGT +
Preference number: 2 (lower is better)
Translates to: PETDESKPSVALMRDASVTNGLL*NPVSSC
Trigger: ACAACTGGAAACAGGGTTCCACAGCAGCCCATTCGT...CACTGATGCATCTCTCATCAATGCTACGGAAGGCTTTGATTCATCAGTCTCGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338144.7
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
3UTR CAA 90 bp GACAACCAATTGACAGAAAGGGGAGGAAGTTACAGCACTTGTGGTTaGAGGCAATTTCTCTTTAGGGCCTGTAGTTCGAGGTGCTGTCCT +
Preference number: 2 (lower is better)
Translates to: DNQLTERGGSYSTCG*RQFLFRACSSRCCP
Trigger: AGGACAGCACCTCGAACTACAGGCCCTAAAGAGAAATTGCCTCAAACCACAAGTGCTGTAACTTCCTCCCCTTTCTGTCAATTGGTTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338144.7
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
3UTR-3UTR TCA 90 bp GCACGAATGGGCTGCTGTGGAACCCTGTTTCCAGTTGTCAAGACAGACTTGGCATTAAAGACAACCAATTaGCAGAAAGGGGAGGAAGTT +
Preference number: 2 (lower is better)
Translates to: ARMGCCGTLFPVVKTDLALKTTN*QKGEEV
Trigger: AACTTCCTCCCCTTTCTGTCAATTGGTTGTCTTTAA...TGCCAAGTCTGTCTTGACAACTGGAAACAGGGTTCCACAGCAGCCCATTCGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338144.7
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
3UTR-3UTR GCA 90 bp GCACGAATGGGCTGCTGTGGAACCCTGTTTCCAGTTGTCAAGACAGACTTGGCAACTCTCCATTGGCTTTaGTTGCTCAGTACATTCTTT +
Preference number: 2 (lower is better)
Translates to: ARMGCCGTLFPVVKTDLATLHWL*LLSTFF
Trigger: AAAGAATGTACTGAGCAAGCAAAGCCAATGGAGAGT...TGCCAAGTCTGTCTTGACAACTGGAAACAGGGTTCCACAGCAGCCCATTCGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338144.7
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
3UTR-3UTR CCA 90 bp ACATGCTGCCATTGCGATTTGCCGATGGGCACTACCAAGGTGTCTCTGGCAATTGGATTGGAAAGACAATaGCAGTTACACAGAGGACTT +
Preference number: 2 (lower is better)
Translates to: TCCHCDLPMGTTKVSLAIGLERQ*QLHRGL
Trigger: AAGTCCTCTGTGTAACTGCCATTGTCTTTCCAATCC...AATTGCCAGAGACACCTTGGTAGTGCCCATCGGCAAATCGCAATGGCAGCATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338144.7
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
3UTR CAA 90 bp CGAATGGGCTGCTGTGGAACCCTGTTTCCAGTTGTCAAGACAGACTaGGCATCTTTTTCCAACATTCTAGTAACCCAAAGGAAGGAACTG +
Preference number: 2 (lower is better)
Translates to: RMGCCGTLFPVVKTD*ASFSNILVTQRKEL
Trigger: CAGTTCCTTCCTTTGGGTTACTAGAATGTTGGAAAAAGATGCCAAGTCTGTCTTGACAACTGGAAACAGGGTTCCACAGCAGCCCATTCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338144.7
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
3UTR-3UTR GCA 90 bp GGGCTGCTGTGGAACCCTGTTTCCAGTTGTCAAGACAGACTTGGCATCTTTTTCTTAGTGCTGCTCTCATaGCTTTCACCAGTAACAACA +
Preference number: 2 (lower is better)
Translates to: GLLWNPVSSCQDRLGIFFLVLLS*LSPVTT
Trigger: TGTTGTTACTGGTGAAAGGCATGAGAGCAGCACTAA...GAAAAAGATGCCAAGTCTGTCTTGACAACTGGAAACAGGGTTCCACAGCAGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338144.7
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
3UTR-3UTR GCA 90 bp GGCTGCTGTGGAACCCTGTTTCCAGTTGTCAAGACAGACTTGGCATCTTTTTCCTTAGTGCTGCTCTCATaGCTTTCACCAGTAACAACA +
Preference number: 2 (lower is better)
Translates to: GCCGTLFPVVKTDLASFSLVLLS*LSPVTT
Trigger: TGTTGTTACTGGTGAAAGGCATGAGAGCAGCACTAA...GGAAAAAGATGCCAAGTCTGTCTTGACAACTGGAAACAGGGTTCCACAGCAGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338144.7
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
3UTR-3UTR CCA 90 bp CAAGCAGAAGTTTCTGAATGGTCCACTCACATGCTGCCATTGCGATTTGCCGATTGGTCTACTGGGGATTaGAAAGACAATGGCAGTTAC +
Preference number: 2 (lower is better)
Translates to: QAEVSEWSTHMLPLRFADWSTGD*KDNGSY
Trigger: GTAACTGCCATTGTCTTTCCAATCCCCAGTAGACCA...ATCGGCAAATCGCAATGGCAGCATGTGAGTGGACCATTCAGAAACTTCTGCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338144.7
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
3UTR-3UTR GCA 90 bp CAAGCAGAAGTTTCTGAATGGTCCACTCACATGCTGCCATTGCGATTTGCCGATTTAGTGCTGCTCTCATaGCTTTCACCAGTAACAACA +
Preference number: 2 (lower is better)
Translates to: QAEVSEWSTHMLPLRFADLVLLS*LSPVTT
Trigger: TGTTGTTACTGGTGAAAGGCATGAGAGCAGCACTAA...ATCGGCAAATCGCAATGGCAGCATGTGAGTGGACCATTCAGAAACTTCTGCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338144.7
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
3UTR-3UTR GCA 90 bp GCACGAATGGGCTGCTGTGGAACCCTGTTTCCAGTTGTCAAGACAGACTTGGCAACTCAAGGGAGGGTATaGTTGCATTATTATAAATAC +
Preference number: 2 (lower is better)
Translates to: ARMGCCGTLFPVVKTDLATQGRV*LHYYKY
Trigger: GTATTTATAATAATGCAAGCATACCCTCCCTTGAGT...TGCCAAGTCTGTCTTGACAACTGGAAACAGGGTTCCACAGCAGCCCATTCGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338144.7
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
3UTR-3UTR CCA 90 bp GTTTCTGAATGGTCCACTCACATGCTGCCATTGCGATTTGCCGATGGGCACTACAAGTTACAGCACTTGTaGTTTGAGGCAATTTCTCTT +
Preference number: 2 (lower is better)
Translates to: VSEWSTHMLPLRFADGHYKLQHL*FEAISL
Trigger: AAGAGAAATTGCCTCAAACCACAAGTGCTGTAACTT...GTAGTGCCCATCGGCAAATCGCAATGGCAGCATGTGAGTGGACCATTCAGAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338144.7
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
3UTR-3UTR CCA 90 bp AAGCCACAAACCATGCTTTGTCGTTTAAAAGGTGAACCTGGTCAGGCACCTTCTTGGTCTACTGGGGATTaGAAAGACAATGGCAGTTAC +
Preference number: 2 (lower is better)
Translates to: KPQTMLCRLKGEPGQAPSWSTGD*KDNGSY
Trigger: GTAACTGCCATTGTCTTTCCAATCCCCAGTAGACCA...AGAAGGTGCCTGACCAGGTTCACCTTTTAAACGACAAAGCATGGTTTGTGGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338144.7
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
3UTR-3UTR CCA 90 bp ACCACCACCACACACAATAAAGACCATCTCTGCCTCAGGACATTCGCCCCAAACACATGCCAGTCATACTaGATACTTGCTTTCTGTAAA +
Preference number: 2 (lower is better)
Translates to: TTTTHNKDHLCLRTFAPNTCQSY*ILAFCK
Trigger: TTTACAGAAAGCAAGTATCCAGTATGACTGGCATGT...GTTTGGGGCGAATGTCCTGAGGCAGAGATGGTCTTTATTGTGTGTGGTGGTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338144.7
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
3UTR-3UTR CCA 90 bp TGCCTCAGGACATTCGCCCCAAACCTCCATCCTCTCTGTTTACTTTCCACCAAGACATGCCAGTCATACTaGATACTTGCTTTCTGTAAA +
Preference number: 2 (lower is better)
Translates to: CLRTFAPNLHPLCLLSTKTCQSY*ILAFCK
Trigger: TTTACAGAAAGCAAGTATCCAGTATGACTGGCATGT...CTTGGTGGAAAGTAAACAGAGAGGATGGAGGTTTGGGGCGAATGTCCTGAGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338144.7
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
3UTR-3UTR CCA 90 bp GGCTGCTGTGGAACCCTGTTTCCAGTTGTCAAGACAGACTTGGCATCTTTTTCCAAGTTACAGCACTTGTaGTTTGAGGCAATTTCTCTT +
Preference number: 2 (lower is better)
Translates to: GCCGTLFPVVKTDLASFSKLQHL*FEAISL
Trigger: AAGAGAAATTGCCTCAAACCACAAGTGCTGTAACTT...GGAAAAAGATGCCAAGTCTGTCTTGACAACTGGAAACAGGGTTCCACAGCAGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338144.7
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
3UTR-3UTR CCA 90 bp GTTTTCAGCACGAATGGGCTGCTGTGGAACCCTGTTTCCAGTTGTCAAGACAGAAAGTTACAGCACTTGTaGTTTGAGGCAATTTCTCTT +
Preference number: 2 (lower is better)
Translates to: VFSTNGLLWNPVSSCQDRKLQHL*FEAISL
Trigger: AAGAGAAATTGCCTCAAACCACAAGTGCTGTAACTT...TCTGTCTTGACAACTGGAAACAGGGTTCCACAGCAGCCCATTCGTGCTGAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338144.7
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
3UTR-3UTR CCA 90 bp GGGCTGCTGTGGAACCCTGTTTCCAGTTGTCAAGACAGACTTGGCATCTTTTTCACATGCCAGTCATACTaGATACTTGCTTTCTGTAAA +
Preference number: 2 (lower is better)
Translates to: GLLWNPVSSCQDRLGIFFTCQSY*ILAFCK
Trigger: TTTACAGAAAGCAAGTATCCAGTATGACTGGCATGT...GAAAAAGATGCCAAGTCTGTCTTGACAACTGGAAACAGGGTTCCACAGCAGCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338144.7
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
3UTR-3UTR CCA 90 bp AGAGATCTATTTATTTTAAGGAATTGGCTCTTGCAATTATGGGGGCTGGCAAGTCTACCAAGGTGTCTCTaGCAATTCGCACTCCAGGTG +
Preference number: 2 (lower is better)
Translates to: RDLFILRNWLLQLWGLASLPRCL*QFALQV
Trigger: CACCTGGAGTGCGAATTGCCAGAGACACCTTGGTAG...ACTTGCCAGCCCCCATAATTGCAAGAGCCAATTCCTTAAAATAAATAGATCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394363.6
3UTR-3UTR TCA 90 bp AGATCTATTTATTTTAAGGAATTGGCTCTTGCAATTATGGGGGCTGGCAAGTTACTTAAGGCCTTCAGCTaGTCAGATGAGGTCCACCCA +
Preference number: 2 (lower is better)
Translates to: RSIYFKELALAIMGAGKLLKAFS*SDEVHP
Trigger: TGGGTGGACCTCATCTGATCAGCTGAAGGCCTTAAG...TAACTTGCCAGCCCCCATAATTGCAAGAGCCAATTCCTTAAAATAAATAGATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394363.6
3UTR-3UTR GCA 90 bp GTTTTCAGCACGAATGGGCTGCTGTGGAACCCTGTTTCCAGTTGTCAAGACAGAACTCAAGGGAGGGTATaGTTGCATTATTATAAATAC +
Preference number: 2 (lower is better)
Translates to: VFSTNGLLWNPVSSCQDRTQGRV*LHYYKY
Trigger: GTATTTATAATAATGCAAGCATACCCTCCCTTGAGT...TCTGTCTTGACAACTGGAAACAGGGTTCCACAGCAGCCCATTCGTGCTGAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338144.7
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
3UTR-3UTR GCA 90 bp AATATTAATATAAATCCCTTCTGCCACTGTGTGCGTGCGTGTGTGTGTTTGTGCTTAGTGCTGCTCTCATaGCTTTCACCAGTAACAACA +
Preference number: 2 (lower is better)
Translates to: NININPFCHCVRACVCLCLVLLS*LSPVTT
Trigger: TGTTGTTACTGGTGAAAGGCATGAGAGCAGCACTAA...GCACAAACACACACACGCACGCACACAGTGGCAGAAGGGATTTATATTAATATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338144.7
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
3UTR-3UTR GCA 90 bp CCCGAGACTGATGAATCAAAGCCTTCCGTAGCATTGATGAGAGATGCATCAGTGACTCAAGGGAGGGTATaGTTGCATTATTATAAATAC +
Preference number: 2 (lower is better)
Translates to: PETDESKPSVALMRDASVTQGRV*LHYYKY
Trigger: GTATTTATAATAATGCAAGCATACCCTCCCTTGAGT...CACTGATGCATCTCTCATCAATGCTACGGAAGGCTTTGATTCATCAGTCTCGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338144.7
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
3UTR-3UTR TCA 90 bp TATCTTCAATTGAGACTCAAGGGAGGGTATGCTTGCATTATTATAAATACCACACACTCCAGGTGGAGCTaGCCTATTTGTAGAAAGCCT +
Preference number: 2 (lower is better)
Translates to: YLQLRLKGGYACIIINTTHSRWS*PICRKP
Trigger: AGGCTTTCTACAAATAGGTCAGCTCCACCTGGAGTG...TGTGGTATTTATAATAATGCAAGCATACCCTCCCTTGAGTCTCAATTGAAGATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338144.7
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
3UTR-3UTR GCA 90 bp ATAGTATTTACAGCAGTACTCGGTTTGCAATTCAACACACTGACAACAGAAGCAAATATAAATCCCTTCTaGCACTGTGTGCGTGCGTGT +
Preference number: 2 (lower is better)
Translates to: IVFTAVLGLQFNTLTTEANINPF*HCVRAC
Trigger: ACACGCACGCACACAGTGGCAGAAGGGATTTATATT...TGCTTCTGTTGTCAGTGTGTTGAATTGCAAACCGAGTACTGCTGTAAATACTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338144.7
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
3UTR-3UTR GCA 90 bp AGATCTATTTATTTTAAGGAATTGGCTCTTGCAATTATGGGGGCTGGCAAGTTAAATAAAGACCATCTCTaGCTCAGGACATTCGCCCCA +
Preference number: 2 (lower is better)
Translates to: RSIYFKELALAIMGAGKLNKDHL*LRTFAP
Trigger: TGGGGCGAATGTCCTGAGGCAGAGATGGTCTTTATT...TAACTTGCCAGCCCCCATAATTGCAAGAGCCAATTCCTTAAAATAAATAGATCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394363.6
3UTR-3UTR CCA 90 bp AGATCTATTTATTTTAAGGAATTGGCTCTTGCAATTATGGGGGCTGGCAAGTTAGCAGAAGTTTCTGAATaGTCCACTCACATGCTGCCA +
Preference number: 2 (lower is better)
Translates to: RSIYFKELALAIMGAGKLAEVSE*STHMLP
Trigger: TGGCAGCATGTGAGTGGACCATTCAGAAACTTCTGC...TAACTTGCCAGCCCCCATAATTGCAAGAGCCAATTCCTTAAAATAAATAGATCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394363.6
3UTR-3UTR TCA 90 bp TATCTTCAATTGAGACTCAAGGGAGGGTATGCTTGCATTATTATAAATACCACATTGTCGTTTAAAAGGTaGACCTGGTCAGGCACCTTC +
Preference number: 2 (lower is better)
Translates to: YLQLRLKGGYACIIINTTLSFKR*TWSGTF
Trigger: GAAGGTGCCTGACCAGGTTCACCTTTTAAACGACAA...TGTGGTATTTATAATAATGCAAGCATACCCTCCCTTGAGTCTCAATTGAAGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338144.7
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
3UTR-3UTR GCA 90 bp TATCTTCAATTGAGACTCAAGGGAGGGTATGCTTGCATTATTATAAATACCACAAATAAAGACCATCTCTaGCTCAGGACATTCGCCCCA +
Preference number: 2 (lower is better)
Translates to: YLQLRLKGGYACIIINTTNKDHL*LRTFAP
Trigger: TGGGGCGAATGTCCTGAGGCAGAGATGGTCTTTATT...TGTGGTATTTATAATAATGCAAGCATACCCTCCCTTGAGTCTCAATTGAAGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338144.7
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
3UTR-3UTR CCA 90 bp AATATTAATATAAATCCCTTCTGCCACTGTGTGCGTGCGTGTGTGTGTTTGTGCACATGCCAGTCATACTaGATACTTGCTTTCTGTAAA +
Preference number: 2 (lower is better)
Translates to: NININPFCHCVRACVCLCTCQSY*ILAFCK
Trigger: TTTACAGAAAGCAAGTATCCAGTATGACTGGCATGT...GCACAAACACACACACGCACGCACACAGTGGCAGAAGGGATTTATATTAATATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338144.7
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
3UTR-3UTR GCA 90 bp AGATCTATTTATTTTAAGGAATTGGCTCTTGCAATTATGGGGGCTGGCAAGTTAAGCATTGATGAGAGATaGATCAGTGAGCAAGCTAGT +
Preference number: 2 (lower is better)
Translates to: RSIYFKELALAIMGAGKLSIDER*ISEQAS
Trigger: ACTAGCTTGCTCACTGATGCATCTCTCATCAATGCT...TAACTTGCCAGCCCCCATAATTGCAAGAGCCAATTCCTTAAAATAAATAGATCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394363.6
3UTR-3UTR CCA 90 bp TATCTTCAATTGAGACTCAAGGGAGGGTATGCTTGCATTATTATAAATACCACATGGTCTACTGGGGATTaGAAAGACAATGGCAGTTAC +
Preference number: 2 (lower is better)
Translates to: YLQLRLKGGYACIIINTTWSTGD*KDNGSY
Trigger: GTAACTGCCATTGTCTTTCCAATCCCCAGTAGACCA...TGTGGTATTTATAATAATGCAAGCATACCCTCCCTTGAGTCTCAATTGAAGATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338144.7
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
3UTR CAA 90 bp ACTCTCCATTGGCTTTGCTTGCTCAGTACATTCTTTTATCTTCAATaGAGACTCAAGGGAGGGTATGCTTGCATTATTATAAATACCACA +
Preference number: 2 (lower is better)
Translates to: TLHWLCLLSTFFYLQ*RLKGGYACIIINTT
Trigger: TGTGGTATTTATAATAATGCAAGCATACCCTCCCTTGAGTCTCAATTGAAGATAAAAGAATGTACTGAGCAAGCAAAGCCAATGGAGAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338144.7
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
3UTR-3UTR CCA 90 bp TATCTTCAATTGAGACTCAAGGGAGGGTATGCTTGCATTATTATAAATACCACAAAGTTACAGCACTTGTaGTTTGAGGCAATTTCTCTT +
Preference number: 2 (lower is better)
Translates to: YLQLRLKGGYACIIINTTKLQHL*FEAISL
Trigger: AAGAGAAATTGCCTCAAACCACAAGTGCTGTAACTT...TGTGGTATTTATAATAATGCAAGCATACCCTCCCTTGAGTCTCAATTGAAGATA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338144.7
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
3UTR-3UTR CAA 90 bp CAGGGGGAAGCCAGTTTTCAGCACGAATGGGCTGCTGTGGAACCCTGTTTCCAGACTCACATGCTGCCATaGCGATTTGCCGATGGGCAC +
Preference number: 3 (lower is better)
Translates to: QGEASFQHEWAAVEPCFQTHMLP*RFADGH
Trigger: GTGCCCATCGGCAAATCGCAATGGCAGCATGTGAGT...CTGGAAACAGGGTTCCACAGCAGCCCATTCGTGCTGAAAACTGGCTTCCCCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338144.7
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
3UTR GCA 72 bp GCTTCAGGGGGAAGCCAGTTTTCAGCACGAATGGGCTaGTGTGGAACCCTGTTTCCAGTTGTCAAGACAGAC +
Preference number: 3 (lower is better)
Translates to: ASGGSQFSARMG*CGTLFPVVKTD
Trigger: GTCTGTCTTGACAACTGGAAACAGGGTTCCACAGCAGCCCATTCGTGCTGAAAACTGGCTTCCCCCTGAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338144.7
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
3UTR GCA 72 bp GCCGGCAGGCTGGAAGTTCTGGCAGGAGTTGGATGTTaGAGTTTTGAGTCCAAAGGCAGTCTCGAAGCAGAA +
Preference number: 3 (lower is better)
Translates to: AGRLEVLAGVGC*SFESKGSLEAE
Trigger: TTCTGCTTCGAGACTGCCTTTGGACTCAAAACTGCAACATCCAACTCCTGCCAGAACTTCCAGCCTGCCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394363.6
3UTR CCA 72 bp ATGGTCCACTCACATGCTGCCATTGCGATTTGCCGATaGGCACTACCAAGGTGTCTCTGGCAATTCGCACTC +
Preference number: 3 (lower is better)
Translates to: MVHSHAAIAICR*ALPRCLWQFAL
Trigger: GAGTGCGAATTGCCAGAGACACCTTGGTAGTGCCCATCGGCAAATCGCAATGGCAGCATGTGAGTGGACCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338144.7
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
3UTR CCA 72 bp AGGGGGAAGCCAGTTTTCAGCACGAATGGGCTGCTGTaGAACCCTGTTTCCAGTTGTCAAGACAGACTTGGC +
Preference number: 3 (lower is better)
Translates to: RGKPVFSTNGLL*NPVSSCQDRLG
Trigger: GCCAAGTCTGTCTTGACAACTGGAAACAGGGTTCCACAGCAGCCCATTCGTGCTGAAAACTGGCTTCCCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338144.7
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
3UTR CCA 72 bp AGGGTGCTTCAGGGGGAAGCCAGTTTTCAGCACGAATaGGCTGCTGTGGAACCCTGTTTCCAGTTGTCAAGA +
Preference number: 3 (lower is better)
Translates to: RVLQGEASFQHE*AAVEPCFQLSR
Trigger: TCTTGACAACTGGAAACAGGGTTCCACAGCAGCCCATTCGTGCTGAAAACTGGCTTCCCCCTGAAGCACCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338144.7
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
3UTR-3UTR CAA 90 bp TGCCTCAGGACATTCGCCCCAAACCTCCATCCTCTCTGTTTACTTTCCACCAAGTGCTGCCATTGCGATTaGCCGATGGGCACTACCAAG +
Preference number: 3 (lower is better)
Translates to: CLRTFAPNLHPLCLLSTKCCHCD*PMGTTK
Trigger: CTTGGTAGTGCCCATCGGCAAATCGCAATGGCAGCA...CTTGGTGGAAAGTAAACAGAGAGGATGGAGGTTTGGGGCGAATGTCCTGAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338144.7
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
3UTR-3UTR CAA 90 bp TGCCTCAGGACATTCGCCCCAAACCTCCATCCTCTCTGTTTACTTTCCACCAAGACTCACATGCTGCCATaGCGATTTGCCGATGGGCAC +
Preference number: 3 (lower is better)
Translates to: CLRTFAPNLHPLCLLSTKTHMLP*RFADGH
Trigger: GTGCCCATCGGCAAATCGCAATGGCAGCATGTGAGT...CTTGGTGGAAAGTAAACAGAGAGGATGGAGGTTTGGGGCGAATGTCCTGAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338144.7
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
3UTR CCA 72 bp ATTGCGATTTGCCGATGGGCACTACCAAGGTGTCTCTaGCAATTCGCACTCCAGGTGGAGCTGACCTATTTG +
Preference number: 3 (lower is better)
Translates to: IAICRWALPRCL*QFALQVELTYL
Trigger: CAAATAGGTCAGCTCCACCTGGAGTGCGAATTGCCAGAGACACCTTGGTAGTGCCCATCGGCAAATCGCAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338144.7
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
3UTR-3UTR CAA 90 bp GGCTGCTGTGGAACCCTGTTTCCAGTTGTCAAGACAGACTTGGCATCTTTTTCCACTCACATGCTGCCATaGCGATTTGCCGATGGGCAC +
Preference number: 3 (lower is better)
Translates to: GCCGTLFPVVKTDLASFSTHMLP*RFADGH
Trigger: GTGCCCATCGGCAAATCGCAATGGCAGCATGTGAGT...GGAAAAAGATGCCAAGTCTGTCTTGACAACTGGAAACAGGGTTCCACAGCAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338144.7
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
3UTR-3UTR CAA 90 bp CAGGGGGAAGCCAGTTTTCAGCACGAATGGGCTGCTGTGGAACCCTGTTTCCAGGTGAAATACTCTCCATaGGCTTTGCTTGCTCAGTAC +
Preference number: 3 (lower is better)
Translates to: QGEASFQHEWAAVEPCFQVKYSP*ALLAQY
Trigger: GTACTGAGCAAGCAAAGCCAATGGAGAGTATTTCAC...CTGGAAACAGGGTTCCACAGCAGCCCATTCGTGCTGAAAACTGGCTTCCCCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338144.7
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
3UTR GCA 72 bp CAGAAGTTTCTGAATGGTCCACTCACATGCTGCCATTaGGATTTGCCGATGGGCACTACCAAGGTGTCTCTG +
Preference number: 3 (lower is better)
Translates to: QKFLNGPLTCCH*DLPMGTTKVSL
Trigger: CAGAGACACCTTGGTAGTGCCCATCGGCAAATCGCAATGGCAGCATGTGAGTGGACCATTCAGAAACTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338144.7
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
3UTR GCA 72 bp ACCAAGCAGAAGTTTCTGAATGGTCCACTCACATGCTaGCATTGCGATTTGCCGATGGGCACTACCAAGGTG +
Preference number: 3 (lower is better)
Translates to: TKQKFLNGPLTC*HCDLPMGTTKV
Trigger: CACCTTGGTAGTGCCCATCGGCAAATCGCAATGGCAGCATGTGAGTGGACCATTCAGAAACTTCTGCTTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338144.7
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
3UTR-3UTR CAA 90 bp ACATGCTGCCATTGCGATTTGCCGATGGGCACTACCAAGGTGTCTCTGGCAATTCTGGTCTACTGGGGATaGGAAAGACAATGGCAGTTA +
Preference number: 3 (lower is better)
Translates to: TCCHCDLPMGTTKVSLAILVYWG*ERQWQL
Trigger: TAACTGCCATTGTCTTTCCAATCCCCAGTAGACCAG...AATTGCCAGAGACACCTTGGTAGTGCCCATCGGCAAATCGCAATGGCAGCATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338144.7
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
3UTR TCA 72 bp AGATGCATCAGTGAGCAAGCTAGTGTAAAATTAACCTaGGCTTCCTGCTGGTGCCACAGCAGGGTGCTTCAG +
Preference number: 3 (lower is better)
Translates to: RCISEQASVKLT*ASCWCHSRVLQ
Trigger: CTGAAGCACCCTGCTGTGGCACCAGCAGGAAGCTCAGGTTAATTTTACACTAGCTTGCTCACTGATGCATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338144.7
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
3UTR GCA 72 bp GGCCAGAGGGGAAAGAATATTAATATAAATCCCTTCTaGCACTGTGTGCGTGCGTGTGTGTGTTTGTGCGTG +
Preference number: 3 (lower is better)
Translates to: GQRGKNININPF*HCVRACVCLCV
Trigger: CACGCACAAACACACACACGCACGCACACAGTGGCAGAAGGGATTTATATTAATATTCTTTCCCCTCTGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338144.7
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
3UTR-3UTR CAA 90 bp CCCGAGACTGATGAATCAAAGCCTTCCGTAGCATTGATGAGAGATGCATCAGTGCTGGTCTACTGGGGATaGGAAAGACAATGGCAGTTA +
Preference number: 3 (lower is better)
Translates to: PETDESKPSVALMRDASVLVYWG*ERQWQL
Trigger: TAACTGCCATTGTCTTTCCAATCCCCAGTAGACCAG...CACTGATGCATCTCTCATCAATGCTACGGAAGGCTTTGATTCATCAGTCTCGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338144.7
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
3UTR-3UTR CAA 90 bp GCACGAATGGGCTGCTGTGGAACCCTGTTTCCAGTTGTCAAGACAGACTTGGCACAAGGGAGGGTATGCTaGCATTATTATAAATACCAC +
Preference number: 3 (lower is better)
Translates to: ARMGCCGTLFPVVKTDLAQGRVC*HYYKYH
Trigger: GTGGTATTTATAATAATGCAAGCATACCCTCCCTTG...TGCCAAGTCTGTCTTGACAACTGGAAACAGGGTTCCACAGCAGCCCATTCGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338144.7
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
3UTR-3UTR CAA 90 bp GCACGAATGGGCTGCTGTGGAACCCTGTTTCCAGTTGTCAAGACAGACTTGGCACTCCATTGGCTTTGCTaGCTCAGTACATTCTTTTAT +
Preference number: 3 (lower is better)
Translates to: ARMGCCGTLFPVVKTDLALHWLC*LSTFFY
Trigger: ATAAAAGAATGTACTGAGCAAGCAAAGCCAATGGAG...TGCCAAGTCTGTCTTGACAACTGGAAACAGGGTTCCACAGCAGCCCATTCGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338144.7
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
3UTR-3UTR CAA 90 bp GGCTGCTGTGGAACCCTGTTTCCAGTTGTCAAGACAGACTTGGCATCTTTTTCCGTGAAATACTCTCCATaGGCTTTGCTTGCTCAGTAC +
Preference number: 3 (lower is better)
Translates to: GCCGTLFPVVKTDLASFSVKYSP*ALLAQY
Trigger: GTACTGAGCAAGCAAAGCCAATGGAGAGTATTTCAC...GGAAAAAGATGCCAAGTCTGTCTTGACAACTGGAAACAGGGTTCCACAGCAGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338144.7
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
3UTR-3UTR CAA 90 bp CCTCAGGACATTCGCCCCAAACCTCCATCCTCTCTGTTTACTTTCCACCAAGCATTTAAAGACAACCAATaGACAGAAAGGGGAGGAAGT +
Preference number: 3 (lower is better)
Translates to: PQDIRPKPPSSLFTFHQAFKDNQ*TERGGS
Trigger: ACTTCCTCCCCTTTCTGTCAATTGGTTGTCTTTAAA...TGCTTGGTGGAAAGTAAACAGAGAGGATGGAGGTTTGGGGCGAATGTCCTGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338144.7
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
3UTR-3UTR CAA 90 bp GTTTCTGAATGGTCCACTCACATGCTGCCATTGCGATTTGCCGATGGGCACTACTTTAAAGACAACCAATaGACAGAAAGGGGAGGAAGT +
Preference number: 3 (lower is better)
Translates to: VSEWSTHMLPLRFADGHYFKDNQ*TERGGS
Trigger: ACTTCCTCCCCTTTCTGTCAATTGGTTGTCTTTAAA...GTAGTGCCCATCGGCAAATCGCAATGGCAGCATGTGAGTGGACCATTCAGAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338144.7
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
3UTR-3UTR CAA 90 bp GTTTTCAGCACGAATGGGCTGCTGTGGAACCCTGTTTCCAGTTGTCAAGACAGATTTAAAGACAACCAATaGACAGAAAGGGGAGGAAGT +
Preference number: 3 (lower is better)
Translates to: VFSTNGLLWNPVSSCQDRFKDNQ*TERGGS
Trigger: ACTTCCTCCCCTTTCTGTCAATTGGTTGTCTTTAAA...TCTGTCTTGACAACTGGAAACAGGGTTCCACAGCAGCCCATTCGTGCTGAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338144.7
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
3UTR-3UTR CAA 90 bp GTTTTCAGCACGAATGGGCTGCTGTGGAACCCTGTTTCCAGTTGTCAAGACAGACAAGGGAGGGTATGCTaGCATTATTATAAATACCAC +
Preference number: 3 (lower is better)
Translates to: VFSTNGLLWNPVSSCQDRQGRVC*HYYKYH
Trigger: GTGGTATTTATAATAATGCAAGCATACCCTCCCTTG...TCTGTCTTGACAACTGGAAACAGGGTTCCACAGCAGCCCATTCGTGCTGAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338144.7
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
3UTR-3UTR CAA 90 bp GGCTGCTGTGGAACCCTGTTTCCAGTTGTCAAGACAGACTTGGCATCTTTTTCCCTCCATTGGCTTTGCTaGCTCAGTACATTCTTTTAT +
Preference number: 3 (lower is better)
Translates to: GCCGTLFPVVKTDLASFSLHWLC*LSTFFY
Trigger: ATAAAAGAATGTACTGAGCAAGCAAAGCCAATGGAG...GGAAAAAGATGCCAAGTCTGTCTTGACAACTGGAAACAGGGTTCCACAGCAGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338144.7
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
3UTR-3UTR CAA 90 bp GTTTTCAGCACGAATGGGCTGCTGTGGAACCCTGTTTCCAGTTGTCAAGACAGACTCCATTGGCTTTGCTaGCTCAGTACATTCTTTTAT +
Preference number: 3 (lower is better)
Translates to: VFSTNGLLWNPVSSCQDRLHWLC*LSTFFY
Trigger: ATAAAAGAATGTACTGAGCAAGCAAAGCCAATGGAG...TCTGTCTTGACAACTGGAAACAGGGTTCCACAGCAGCCCATTCGTGCTGAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338144.7
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
3UTR-3UTR CAA 90 bp GTTTTCAGCACGAATGGGCTGCTGTGGAACCCTGTTTCCAGTTGTCAAGACAGAAGTCATACTGGATACTaGCTTTCTGTAAACACATCT +
Preference number: 3 (lower is better)
Translates to: VFSTNGLLWNPVSSCQDRSHTGY*LSVNTS
Trigger: AGATGTGTTTACAGAAAGCAAGTATCCAGTATGACT...TCTGTCTTGACAACTGGAAACAGGGTTCCACAGCAGCCCATTCGTGCTGAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338144.7
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
3UTR-3UTR CAA 90 bp GGGCTGCTGTGGAACCCTGTTTCCAGTTGTCAAGACAGACTTGGCATCTTTTTCAGTCATACTGGATACTaGCTTTCTGTAAACACATCT +
Preference number: 3 (lower is better)
Translates to: GLLWNPVSSCQDRLGIFFSHTGY*LSVNTS
Trigger: AGATGTGTTTACAGAAAGCAAGTATCCAGTATGACT...GAAAAAGATGCCAAGTCTGTCTTGACAACTGGAAACAGGGTTCCACAGCAGCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338144.7
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
3UTR-3UTR CAA 90 bp GGGCTGCTGTGGAACCCTGTTTCCAGTTGTCAAGACAGACTTGGCATCTTTTTCTTCTTTTATCTTCAATaGAGACTCAAGGGAGGGTAT +
Preference number: 3 (lower is better)
Translates to: GLLWNPVSSCQDRLGIFFFFYLQ*RLKGGY
Trigger: ATACCCTCCCTTGAGTCTCAATTGAAGATAAAAGAA...GAAAAAGATGCCAAGTCTGTCTTGACAACTGGAAACAGGGTTCCACAGCAGCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338144.7
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
3UTR-3UTR CAA 90 bp GTTTTCAGCACGAATGGGCTGCTGTGGAACCCTGTTTCCAGTTGTCAAGACAGATTCTTTTATCTTCAATaGAGACTCAAGGGAGGGTAT +
Preference number: 3 (lower is better)
Translates to: VFSTNGLLWNPVSSCQDRFFYLQ*RLKGGY
Trigger: ATACCCTCCCTTGAGTCTCAATTGAAGATAAAAGAA...TCTGTCTTGACAACTGGAAACAGGGTTCCACAGCAGCCCATTCGTGCTGAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338144.7
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
3UTR-3UTR CAA 90 bp CCCGAGACTGATGAATCAAAGCCTTCCGTAGCATTGATGAGAGATGCATCAGTGAGTCATACTGGATACTaGCTTTCTGTAAACACATCT +
Preference number: 3 (lower is better)
Translates to: PETDESKPSVALMRDASVSHTGY*LSVNTS
Trigger: AGATGTGTTTACAGAAAGCAAGTATCCAGTATGACT...CACTGATGCATCTCTCATCAATGCTACGGAAGGCTTTGATTCATCAGTCTCGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338144.7
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
3UTR CCA 72 bp ATTTATTTACTGGTCTACTGGGGATTGGAAAGACAATaGCAGTTACACAGAGGACTTAGTGCTGCTCTCATG +
Preference number: 3 (lower is better)
Translates to: IYLLVYWGLERQ*QLHRGLSAALM
Trigger: CATGAGAGCAGCACTAAGTCCTCTGTGTAACTGCCATTGTCTTTCCAATCCCCAGTAGACCAGTAAATAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338144.7
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
3UTR TCA 72 bp TATTTACAGCAGTACTCGGTTTGCAATTCAACACACTaGCAACAGAAGCAAAGGGACCAACAGACTGTAAGA +
Preference number: 3 (lower is better)
Translates to: YLQQYSVCNSTH*QQKQRDQQTVR
Trigger: TCTTACAGTCTGTTGGTCCCTTTGCTTCTGTTGTCAGTGTGTTGAATTGCAAACCGAGTACTGCTGTAAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338144.7
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
3UTR-3UTR CAA 90 bp AGATCTATTTATTTTAAGGAATTGGCTCTTGCAATTATGGGGGCTGGCAAGTTATATAGCCTAGCCAAGTaGCCACACAAAATTAACCAT +
Preference number: 3 (lower is better)
Translates to: RSIYFKELALAIMGAGKLYSLAK*PHKINH
Trigger: ATGGTTAATTTTGTGTGGCAACTTGGCTAGGCTATA...TAACTTGCCAGCCCCCATAATTGCAAGAGCCAATTCCTTAAAATAAATAGATCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394363.6
CDS-3UTR CCA 90 bp CCCGAGACTGATGAATCAAAGCCTTCCGTAGCATTGATGAGAGATGCATCAGTGCGGCGCGGCAGTTCCTaGGCTCGTAGTGCCCTCGCG +
Preference number: 4 (lower is better)
Translates to: PETDESKPSVALMRDASVRRGSS*ARSALA
Trigger: CGCGAGGGCACTACGAGCCCAGGAACTGCCGCGCCG...CACTGATGCATCTCTCATCAATGCTACGGAAGGCTTTGATTCATCAGTCTCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370935.5
ENST00000394363.6
CDS-3UTR GCA 90 bp GCACGAATGGGCTGCTGTGGAACCCTGTTTCCAGTTGTCAAGACAGACTTGGCACACTCTCTTCCGAAATaGCCGCCTCGCGCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: ARMGCCGTLFPVVKTDLAHSLPK*PPRASR
Trigger: CCTGGAAGCGCGAGGCGGGCATTTCGGAAGAGAGTG...TGCCAAGTCTGTCTTGACAACTGGAAACAGGGTTCCACAGCAGCCCATTCGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CCA 90 bp CCACTCACATGCTGCCATTGCGATTTGCCGATGGGCACTACCAAGGTGTCTCTGGTGGACCACTGGGGGTaGAGATGGTGGACGCAATCT +
Preference number: 4 (lower is better)
Translates to: PLTCCHCDLPMGTTKVSLVDHWG*RWWTQS
Trigger: AGATTGCGTCCACCATCTCCACCCCCAGTGGTCCAC...CAGAGACACCTTGGTAGTGCCCATCGGCAAATCGCAATGGCAGCATGTGAGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CCA 90 bp CAGGGGGAAGCCAGTTTTCAGCACGAATGGGCTGCTGTGGAACCCTGTTTCCAGCCCATGCCTTCTGCTTaGAGGCGGAATGGTACACAG +
Preference number: 4 (lower is better)
Translates to: QGEASFQHEWAAVEPCFQPMPSA*RRNGTQ
Trigger: CTGTGTACCATTCCGCCTCCAAGCAGAAGGCATGGG...CTGGAAACAGGGTTCCACAGCAGCCCATTCGTGCTGAAAACTGGCTTCCCCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR TCA 90 bp CAGGGGGAAGCCAGTTTTCAGCACGAATGGGCTGCTGTGGAACCCTGTTTCCAGGCTGCATTCATGATCTaGATAGTGGACCACTGGGGG +
Preference number: 4 (lower is better)
Translates to: QGEASFQHEWAAVEPCFQAAFMI*IVDHWG
Trigger: CCCCCAGTGGTCCACTATTCAGATCATGAATGCAGC...CTGGAAACAGGGTTCCACAGCAGCCCATTCGTGCTGAAAACTGGCTTCCCCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR TCA 90 bp ACCACCACCACACACAATAAAGACCATCTCTGCCTCAGGACATTCGCCCCAAACTGGCGCTACGACGGTTaGCCTCTCCTCGCTCTATCC +
Preference number: 4 (lower is better)
Translates to: TTTTHNKDHLCLRTFAPNWRYDG*PLLALS
Trigger: GGATAGAGCGAGGAGAGGTCAACCGTCGTAGCGCCA...GTTTGGGGCGAATGTCCTGAGGCAGAGATGGTCTTTATTGTGTGTGGTGGTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR TCA 90 bp CAGGGGGAAGCCAGTTTTCAGCACGAATGGGCTGCTGTGGAACCCTGTTTCCAGTTCGCTATCCTGGTTTaGGGCACACAGCCTAGAAGC +
Preference number: 4 (lower is better)
Translates to: QGEASFQHEWAAVEPCFQFAILV*GTQPRS
Trigger: GCTTCTAGGCTGTGTGCCTCAAACCAGGATAGCGAA...CTGGAAACAGGGTTCCACAGCAGCCCATTCGTGCTGAAAACTGGCTTCCCCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR GCA 90 bp TGCCTCAGGACATTCGCCCCAAACCTCCATCCTCTCTGTTTACTTTCCACCAAGCACTCTCTTCCGAAATaGCCGCCTCGCGCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: CLRTFAPNLHPLCLLSTKHSLPK*PPRASR
Trigger: CCTGGAAGCGCGAGGCGGGCATTTCGGAAGAGAGTG...CTTGGTGGAAAGTAAACAGAGAGGATGGAGGTTTGGGGCGAATGTCCTGAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CCA 90 bp CAGGGGGAAGCCAGTTTTCAGCACGAATGGGCTGCTGTGGAACCCTGTTTCCAGTCGGGTTGCAGGAGGTaGGAGATTTGGATTTGGAGG +
Preference number: 4 (lower is better)
Translates to: QGEASFQHEWAAVEPCFQSGCRR*EIWIWR
Trigger: CCTCCAAATCCAAATCTCCCACCTCCTGCAACCCGA...CTGGAAACAGGGTTCCACAGCAGCCCATTCGTGCTGAAAACTGGCTTCCCCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CCA 90 bp GCCGGCAGGCTGGAAGTTCTGGCAGGAGTTGGATGTTGCAGTTTTGAGTCCAAAGGCGGACATGGCTGTTaGCCGACTGGATCATGGAGT +
Preference number: 4 (lower is better)
Translates to: AGRLEVLAGVGCCSFESKGGHGC*PTGSWS
Trigger: ACTCCATGATCCAGTCGGCCAACAGCCATGTCCGCC...TTTGGACTCAAAACTGCAACATCCAACTCCTGCCAGAACTTCCAGCCTGCCGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394363.6
CDS-3UTR CCA 90 bp GTTTCTGAATGGTCCACTCACATGCTGCCATTGCGATTTGCCGATGGGCACTACCTAGACCCGGCACTCTaGCCCAAGGCTGGACTCTCA +
Preference number: 4 (lower is better)
Translates to: VSEWSTHMLPLRFADGHYLDPAL*PKAGLS
Trigger: TGAGAGTCCAGCCTTGGGCCAGAGTGCCGGGTCTAG...GTAGTGCCCATCGGCAAATCGCAATGGCAGCATGTGAGTGGACCATTCAGAAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370935.5
CDS-3UTR TCA 90 bp CCTCAGGACATTCGCCCCAAACCTCCATCCTCTCTGTTTACTTTCCACCAAGCAGCTGGAGTCTACCCATaGGACACTCCACATCGCTGG +
Preference number: 4 (lower is better)
Translates to: PQDIRPKPPSSLFTFHQAAGVYP*DTPHRW
Trigger: CCAGCGATGTGGAGTGTCTCATGGGTAGACTCCAGC...TGCTTGGTGGAAAGTAAACAGAGAGGATGGAGGTTTGGGGCGAATGTCCTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR TCA 90 bp CAGGGGGAAGCCAGTTTTCAGCACGAATGGGCTGCTGTGGAACCCTGTTTCCAGCACTCCAGGTGGAGCTaGCCTATTTGTAGAAAGCCT +
Preference number: 4 (lower is better)
Translates to: QGEASFQHEWAAVEPCFQHSRWS*PICRKP
Trigger: AGGCTTTCTACAAATAGGTCAGCTCCACCTGGAGTG...CTGGAAACAGGGTTCCACAGCAGCCCATTCGTGCTGAAAACTGGCTTCCCCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR GCA 90 bp CCACTCACATGCTGCCATTGCGATTTGCCGATGGGCACTACCAAGGTGTCTCTGTGGTCTTTCTCGGGTTaGAGGAGGTGGGAGATTTGG +
Preference number: 4 (lower is better)
Translates to: PLTCCHCDLPMGTTKVSLWSFSG*RRWEIW
Trigger: CCAAATCTCCCACCTCCTGCAACCCGAGAAAGACCA...CAGAGACACCTTGGTAGTGCCCATCGGCAAATCGCAATGGCAGCATGTGAGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR GCA 90 bp GCCGGCAGGCTGGAAGTTCTGGCAGGAGTTGGATGTTGCAGTTTTGAGTCCAAATGGTCCCATGCCTTCTaGTTGGAGGCGGAATGGTAC +
Preference number: 4 (lower is better)
Translates to: AGRLEVLAGVGCCSFESKWSHAF*LEAEWY
Trigger: GTACCATTCCGCCTCCAAGCAGAAGGCATGGGACCA...TTTGGACTCAAAACTGCAACATCCAACTCCTGCCAGAACTTCCAGCCTGCCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394363.6
CDS-3UTR GCA 90 bp CCACTCACATGCTGCCATTGCGATTTGCCGATGGGCACTACCAAGGTGTCTCTGGGTCCACTCACATGCTaGCATTGCGATTTGCCGATG +
Preference number: 4 (lower is better)
Translates to: PLTCCHCDLPMGTTKVSLGPLTC*HCDLPM
Trigger: CATCGGCAAATCGCAATGGCAGCATGTGAGTGGACC...CAGAGACACCTTGGTAGTGCCCATCGGCAAATCGCAATGGCAGCATGTGAGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR GCA 90 bp GCTGGCAAGTTAGAGATTTGTAGGGCAGGCCGGCAGGCTGGAAGTTCTGGCAGGAATAAAGACCATCTCTaGCTCAGGACATTCGCCCCA +
Preference number: 4 (lower is better)
Translates to: AGKLEICRAGRQAGSSGRNKDHL*LRTFAP
Trigger: TGGGGCGAATGTCCTGAGGCAGAGATGGTCTTTATT...CCTGCCAGAACTTCCAGCCTGCCGGCCTGCCCTACAAATCTCTAACTTGCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394363.6
CDS-3UTR CCA 90 bp AATATTAATATAAATCCCTTCTGCCACTGTGTGCGTGCGTGTGTGTGTTTGTGCCGGCGCGGCAGTTCCTaGGCTCGTAGTGCCCTCGCG +
Preference number: 4 (lower is better)
Translates to: NININPFCHCVRACVCLCRRGSS*ARSALA
Trigger: CGCGAGGGCACTACGAGCCCAGGAACTGCCGCGCCG...GCACAAACACACACACGCACGCACACAGTGGCAGAAGGGATTTATATTAATATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CCA 90 bp ACATGCTGCCATTGCGATTTGCCGATGGGCACTACCAAGGTGTCTCTGGCAATTGGCGGACATGGCTGTTaGCCGACTGGATCATGGAGT +
Preference number: 4 (lower is better)
Translates to: TCCHCDLPMGTTKVSLAIGGHGC*PTGSWS
Trigger: ACTCCATGATCCAGTCGGCCAACAGCCATGTCCGCC...AATTGCCAGAGACACCTTGGTAGTGCCCATCGGCAAATCGCAATGGCAGCATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CCA 90 bp GCCGGCAGGCTGGAAGTTCTGGCAGGAGTTGGATGTTGCAGTTTTGAGTCCAAACCCATGCCTTCTGCTTaGAGGCGGAATGGTACACAG +
Preference number: 4 (lower is better)
Translates to: AGRLEVLAGVGCCSFESKPMPSA*RRNGTQ
Trigger: CTGTGTACCATTCCGCCTCCAAGCAGAAGGCATGGG...TTTGGACTCAAAACTGCAACATCCAACTCCTGCCAGAACTTCCAGCCTGCCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394363.6
CDS-3UTR CCA 90 bp CAGGGGGAAGCCAGTTTTCAGCACGAATGGGCTGCTGTGGAACCCTGTTTCCAGTGGGCTTTTGTGAAGTaGTCCCATGCCTTCTGCTTG +
Preference number: 4 (lower is better)
Translates to: QGEASFQHEWAAVEPCFQWAFVK*SHAFCL
Trigger: CAAGCAGAAGGCATGGGACCACTTCACAAAAGCCCA...CTGGAAACAGGGTTCCACAGCAGCCCATTCGTGCTGAAAACTGGCTTCCCCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CCA 90 bp CCACTCACATGCTGCCATTGCGATTTGCCGATGGGCACTACCAAGGTGTCTCTGGGTGAACGTGTGCCATaGTGGTTTTGCTGCACCTCA +
Preference number: 4 (lower is better)
Translates to: PLTCCHCDLPMGTTKVSLGERVP*WFCCTS
Trigger: TGAGGTGCAGCAAAACCACCATGGCACACGTTCACC...CAGAGACACCTTGGTAGTGCCCATCGGCAAATCGCAATGGCAGCATGTGAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR TCA 90 bp CAAGCAGAAGTTTCTGAATGGTCCACTCACATGCTGCCATTGCGATTTGCCGATTGGCGCTACGACGGTTaGCCTCTCCTCGCTCTATCC +
Preference number: 4 (lower is better)
Translates to: QAEVSEWSTHMLPLRFADWRYDG*PLLALS
Trigger: GGATAGAGCGAGGAGAGGTCAACCGTCGTAGCGCCA...ATCGGCAAATCGCAATGGCAGCATGTGAGTGGACCATTCAGAAACTTCTGCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR TCA 90 bp CCCGAGACTGATGAATCAAAGCCTTCCGTAGCATTGATGAGAGATGCATCAGTGTGGCGCTACGACGGTTaGCCTCTCCTCGCTCTATCC +
Preference number: 4 (lower is better)
Translates to: PETDESKPSVALMRDASVWRYDG*PLLALS
Trigger: GGATAGAGCGAGGAGAGGTCAACCGTCGTAGCGCCA...CACTGATGCATCTCTCATCAATGCTACGGAAGGCTTTGATTCATCAGTCTCGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR TCA 90 bp ACCACCACCACACACAATAAAGACCATCTCTGCCTCAGGACATTCGCCCCAAACTCCGCTGGGCTTTTGTaGAGTGGTCCCATGCCTTCT +
Preference number: 4 (lower is better)
Translates to: TTTTHNKDHLCLRTFAPNSAGLL*SGPMPS
Trigger: AGAAGGCATGGGACCACTTCACAAAAGCCCAGCGGA...GTTTGGGGCGAATGTCCTGAGGCAGAGATGGTCTTTATTGTGTGTGGTGGTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR TCA 90 bp CAGGGGGAAGCCAGTTTTCAGCACGAATGGGCTGCTGTGGAACCCTGTTTCCAGCCAAGCAGAAGTTTCTaGATGGTCCACTCACATGCT +
Preference number: 4 (lower is better)
Translates to: QGEASFQHEWAAVEPCFQPSRSF*MVHSHA
Trigger: AGCATGTGAGTGGACCATTCAGAAACTTCTGCTTGG...CTGGAAACAGGGTTCCACAGCAGCCCATTCGTGCTGAAAACTGGCTTCCCCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR GCA 90 bp GCACGAATGGGCTGCTGTGGAACCCTGTTTCCAGTTGTCAAGACAGACTTGGCATGGTCTTTCTCGGGTTaGAGGAGGTGGGAGATTTGG +
Preference number: 4 (lower is better)
Translates to: ARMGCCGTLFPVVKTDLAWSFSG*RRWEIW
Trigger: CCAAATCTCCCACCTCCTGCAACCCGAGAAAGACCA...TGCCAAGTCTGTCTTGACAACTGGAAACAGGGTTCCACAGCAGCCCATTCGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR GCA 90 bp GCTGGCAAGTTAGAGATTTGTAGGGCAGGCCGGCAGGCTGGAAGTTCTGGCAGGATTCCAGAAAGGGCCTaGTTGAACTTCTCCTTTGCT +
Preference number: 4 (lower is better)
Translates to: AGKLEICRAGRQAGSSGRIPERA*LNFSFA
Trigger: AGCAAAGGAGAAGTTCAAGCAGGCCCTTTCTGGAAT...CCTGCCAGAACTTCCAGCCTGCCGGCCTGCCCTACAAATCTCTAACTTGCCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394363.6
CDS-3UTR GCA 90 bp GCTGGCAAGTTAGAGATTTGTAGGGCAGGCCGGCAGGCTGGAAGTTCTGGCAGGACTCCAGTCATTTCCTaGTTGAAGGTATGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: AGKLEICRAGRQAGSSGRTPVIS*LKVCWS
Trigger: ACTCCAGCATACCTTCAAGCAGGAAATGACTGGAGT...CCTGCCAGAACTTCCAGCCTGCCGGCCTGCCCTACAAATCTCTAACTTGCCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394363.6
CDS-3UTR GCA 90 bp GCCGGCAGGCTGGAAGTTCTGGCAGGAGTTGGATGTTGCAGTTTTGAGTCCAAACTCACATGCTGCCATTaGGATTTGCCGATGGGCACT +
Preference number: 4 (lower is better)
Translates to: AGRLEVLAGVGCCSFESKLTCCH*DLPMGT
Trigger: AGTGCCCATCGGCAAATCGCAATGGCAGCATGTGAG...TTTGGACTCAAAACTGCAACATCCAACTCCTGCCAGAACTTCCAGCCTGCCGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394363.6
CDS-3UTR GCA 90 bp GCACGAATGGGCTGCTGTGGAACCCTGTTTCCAGTTGTCAAGACAGACTTGGCAGGTCCACTCACATGCTaGCATTGCGATTTGCCGATG +
Preference number: 4 (lower is better)
Translates to: ARMGCCGTLFPVVKTDLAGPLTC*HCDLPM
Trigger: CATCGGCAAATCGCAATGGCAGCATGTGAGTGGACC...TGCCAAGTCTGTCTTGACAACTGGAAACAGGGTTCCACAGCAGCCCATTCGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR GCA 90 bp CCACTCACATGCTGCCATTGCGATTTGCCGATGGGCACTACCAAGGTGTCTCTGAATGGTCCACTCACATaGTGCCATTGCGATTTGCCG +
Preference number: 4 (lower is better)
Translates to: PLTCCHCDLPMGTTKVSLNGPLT*CHCDLP
Trigger: CGGCAAATCGCAATGGCAGCATGTGAGTGGACCATT...CAGAGACACCTTGGTAGTGCCCATCGGCAAATCGCAATGGCAGCATGTGAGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR GCA 90 bp CAAGCAGAAGTTTCTGAATGGTCCACTCACATGCTGCCATTGCGATTTGCCGATGGTGCCACAGCAGGGTaGTTCAGGGGGAAGCCAGTT +
Preference number: 4 (lower is better)
Translates to: QAEVSEWSTHMLPLRFADGATAG*FRGKPV
Trigger: AACTGGCTTCCCCCTGAAGCACCCTGCTGTGGCACC...ATCGGCAAATCGCAATGGCAGCATGTGAGTGGACCATTCAGAAACTTCTGCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CCA 90 bp CCACTCACATGCTGCCATTGCGATTTGCCGATGGGCACTACCAAGGTGTCTCTGAGGAGGTGGGAGATTTaGATTTGGAGGGAAGAGCGT +
Preference number: 4 (lower is better)
Translates to: PLTCCHCDLPMGTTKVSLRRWEI*IWREER
Trigger: ACGCTCTTCCCTCCAAATCCAAATCTCCCACCTCCT...CAGAGACACCTTGGTAGTGCCCATCGGCAAATCGCAATGGCAGCATGTGAGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CCA 90 bp GCACGAATGGGCTGCTGTGGAACCCTGTTTCCAGTTGTCAAGACAGACTTGGCAGATGGCGCTCCTCTCTaGCTAGCATACGCTGTTTAC +
Preference number: 4 (lower is better)
Translates to: ARMGCCGTLFPVVKTDLADGAPL*LAYAVY
Trigger: GTAAACAGCGTATGCTAGCCAGAGAGGAGCGCCATC...TGCCAAGTCTGTCTTGACAACTGGAAACAGGGTTCCACAGCAGCCCATTCGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CCA 90 bp AGTCCAAAGGCAGTCTCGAAGCAGAATTCCCTCCTCAGGGGACTTCAGTCTTTTGTGGACCACTGGGGGTaGAGATGGTGGACGCAATCT +
Preference number: 4 (lower is better)
Translates to: SPKAVSKQNSLLRGLQSFVDHWG*RWWTQS
Trigger: AGATTGCGTCCACCATCTCCACCCCCAGTGGTCCAC...AAAAGACTGAAGTCCCCTGAGGAGGGAATTCTGCTTCGAGACTGCCTTTGGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394363.6
CDS-3UTR CCA 90 bp CCACTCACATGCTGCCATTGCGATTTGCCGATGGGCACTACCAAGGTGTCTCTGACGAATGGGCTGCTGTaGAACCCTGTTTCCAGTTGT +
Preference number: 4 (lower is better)
Translates to: PLTCCHCDLPMGTTKVSLTNGLL*NPVSSC
Trigger: ACAACTGGAAACAGGGTTCCACAGCAGCCCATTCGT...CAGAGACACCTTGGTAGTGCCCATCGGCAAATCGCAATGGCAGCATGTGAGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CCA 90 bp GCACGAATGGGCTGCTGTGGAACCCTGTTTCCAGTTGTCAAGACAGACTTGGCAGGTGAACGTGTGCCATaGTGGTTTTGCTGCACCTCA +
Preference number: 4 (lower is better)
Translates to: ARMGCCGTLFPVVKTDLAGERVP*WFCCTS
Trigger: TGAGGTGCAGCAAAACCACCATGGCACACGTTCACC...TGCCAAGTCTGTCTTGACAACTGGAAACAGGGTTCCACAGCAGCCCATTCGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR TCA 90 bp GTTTCTGAATGGTCCACTCACATGCTGCCATTGCGATTTGCCGATGGGCACTACGCTGCATTCATGATCTaGATAGTGGACCACTGGGGG +
Preference number: 4 (lower is better)
Translates to: VSEWSTHMLPLRFADGHYAAFMI*IVDHWG
Trigger: CCCCCAGTGGTCCACTATTCAGATCATGAATGCAGC...GTAGTGCCCATCGGCAAATCGCAATGGCAGCATGTGAGTGGACCATTCAGAAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR TCA 90 bp GTTTTCAGCACGAATGGGCTGCTGTGGAACCCTGTTTCCAGTTGTCAAGACAGATCCGCTGGGCTTTTGTaGAGTGGTCCCATGCCTTCT +
Preference number: 4 (lower is better)
Translates to: VFSTNGLLWNPVSSCQDRSAGLL*SGPMPS
Trigger: AGAAGGCATGGGACCACTTCACAAAAGCCCAGCGGA...TCTGTCTTGACAACTGGAAACAGGGTTCCACAGCAGCCCATTCGTGCTGAAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR TCA 90 bp AGTCCAAAGGCAGTCTCGAAGCAGAATTCCCTCCTCAGGGGACTTCAGTCTTTTTCCGCTGGGCTTTTGTaGAGTGGTCCCATGCCTTCT +
Preference number: 4 (lower is better)
Translates to: SPKAVSKQNSLLRGLQSFSAGLL*SGPMPS
Trigger: AGAAGGCATGGGACCACTTCACAAAAGCCCAGCGGA...AAAAGACTGAAGTCCCCTGAGGAGGGAATTCTGCTTCGAGACTGCCTTTGGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394363.6
CDS-3UTR TCA 90 bp CAGGGGGAAGCCAGTTTTCAGCACGAATGGGCTGCTGTGGAACCCTGTTTCCAGTGCCTTGTTCTTGCTTaGGCAGTTCTACTTCATTCC +
Preference number: 4 (lower is better)
Translates to: QGEASFQHEWAAVEPCFQCLVLA*AVLLHS
Trigger: GGAATGAAGTAGAACTGCTCAAGCAAGAACAAGGCA...CTGGAAACAGGGTTCCACAGCAGCCCATTCGTGCTGAAAACTGGCTTCCCCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR GCA 90 bp CAGGGGGAAGCCAGTTTTCAGCACGAATGGGCTGCTGTGGAACCCTGTTTCCAGATTCCAGAAAGGGCCTaGTTGAACTTCTCCTTTGCT +
Preference number: 4 (lower is better)
Translates to: QGEASFQHEWAAVEPCFQIPERA*LNFSFA
Trigger: AGCAAAGGAGAAGTTCAAGCAGGCCCTTTCTGGAAT...CTGGAAACAGGGTTCCACAGCAGCCCATTCGTGCTGAAAACTGGCTTCCCCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR GCA 90 bp GGCTGCTGTGGAACCCTGTTTCCAGTTGTCAAGACAGACTTGGCATCTTTTTCCTGGTCCCATGCCTTCTaGTTGGAGGCGGAATGGTAC +
Preference number: 4 (lower is better)
Translates to: GCCGTLFPVVKTDLASFSWSHAF*LEAEWY
Trigger: GTACCATTCCGCCTCCAAGCAGAAGGCATGGGACCA...GGAAAAAGATGCCAAGTCTGTCTTGACAACTGGAAACAGGGTTCCACAGCAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR GCA 90 bp GGCTGCTGTGGAACCCTGTTTCCAGTTGTCAAGACAGACTTGGCATCTTTTTCCTGTGAAGTGGTCCCATaGCTTCTGCTTGGAGGCGGA +
Preference number: 4 (lower is better)
Translates to: GCCGTLFPVVKTDLASFSCEVVP*LLLGGG
Trigger: TCCGCCTCCAAGCAGAAGGCATGGGACCACTTCACA...GGAAAAAGATGCCAAGTCTGTCTTGACAACTGGAAACAGGGTTCCACAGCAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR GCA 90 bp GCACGAATGGGCTGCTGTGGAACCCTGTTTCCAGTTGTCAAGACAGACTTGGCATGCTGTTGCATTCCTTaGAGGGCTTGTTGCAGGAGT +
Preference number: 4 (lower is better)
Translates to: ARMGCCGTLFPVVKTDLACCCIP*RACCRS
Trigger: ACTCCTGCAACAAGCCCTGCAAGGAATGCAACAGCA...TGCCAAGTCTGTCTTGACAACTGGAAACAGGGTTCCACAGCAGCCCATTCGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR GCA 90 bp CAGGGGGAAGCCAGTTTTCAGCACGAATGGGCTGCTGTGGAACCCTGTTTCCAGACTCCAGTCATTTCCTaGTTGAAGGTATGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: QGEASFQHEWAAVEPCFQTPVIS*LKVCWS
Trigger: ACTCCAGCATACCTTCAAGCAGGAAATGACTGGAGT...CTGGAAACAGGGTTCCACAGCAGCCCATTCGTGCTGAAAACTGGCTTCCCCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR GCA 90 bp GGGCTGCTGTGGAACCCTGTTTCCAGTTGTCAAGACAGACTTGGCATCTTTTTCGCTGCCATTGCGATTTaGCGATGGGCACTACCAAGG +
Preference number: 4 (lower is better)
Translates to: GLLWNPVSSCQDRLGIFFAAIAI*RWALPR
Trigger: CCTTGGTAGTGCCCATCGGCAAATCGCAATGGCAGC...GAAAAAGATGCCAAGTCTGTCTTGACAACTGGAAACAGGGTTCCACAGCAGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CCA 90 bp GCCGGCAGGCTGGAAGTTCTGGCAGGAGTTGGATGTTGCAGTTTTGAGTCCAAAGGGTCAAAGGGCAGCTaGTTCAATCCATCACACTTC +
Preference number: 4 (lower is better)
Translates to: AGRLEVLAGVGCCSFESKGSKGS*FNPSHF
Trigger: GAAGTGTGATGGATTGAACCAGCTGCCCTTTGACCC...TTTGGACTCAAAACTGCAACATCCAACTCCTGCCAGAACTTCCAGCCTGCCGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394363.6
CDS-3UTR CCA 90 bp CCTCAGGACATTCGCCCCAAACCTCCATCCTCTCTGTTTACTTTCCACCAAGCAGATGGCGCTCCTCTCTaGCTAGCATACGCTGTTTAC +
Preference number: 4 (lower is better)
Translates to: PQDIRPKPPSSLFTFHQADGAPL*LAYAVY
Trigger: GTAAACAGCGTATGCTAGCCAGAGAGGAGCGCCATC...TGCTTGGTGGAAAGTAAACAGAGAGGATGGAGGTTTGGGGCGAATGTCCTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CCA 90 bp GTTTCTGAATGGTCCACTCACATGCTGCCATTGCGATTTGCCGATGGGCACTACTCCATTCTTCTACGATaGCGCTCCTCTCTGGCTAGC +
Preference number: 4 (lower is better)
Translates to: VSEWSTHMLPLRFADGHYSILLR*RSSLAS
Trigger: GCTAGCCAGAGAGGAGCGCCATCGTAGAAGAATGGA...GTAGTGCCCATCGGCAAATCGCAATGGCAGCATGTGAGTGGACCATTCAGAAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CCA 90 bp GCCGGCAGGCTGGAAGTTCTGGCAGGAGTTGGATGTTGCAGTTTTGAGTCCAAATGGGGGTGGAGATGGTaGACGCAATCTTTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: AGRLEVLAGVGCCSFESKWGWRW*TQSFFF
Trigger: GAAGAAGAAAGATTGCGTCCACCATCTCCACCCCCA...TTTGGACTCAAAACTGCAACATCCAACTCCTGCCAGAACTTCCAGCCTGCCGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394363.6
CDS-3UTR CCA 90 bp ACATGCTGCCATTGCGATTTGCCGATGGGCACTACCAAGGTGTCTCTGGCAATTCACTGGGGGTGGAGATaGTGGACGCAATCTTTCTTC +
Preference number: 4 (lower is better)
Translates to: TCCHCDLPMGTTKVSLAIHWGWR*WTQSFF
Trigger: GAAGAAAGATTGCGTCCACCATCTCCACCCCCAGTG...AATTGCCAGAGACACCTTGGTAGTGCCCATCGGCAAATCGCAATGGCAGCATGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CCA 90 bp CAGGGGGAAGCCAGTTTTCAGCACGAATGGGCTGCTGTGGAACCCTGTTTCCAGTCCATATCTTTCTCATaGGCAGCTTTCTCGTTCACC +
Preference number: 4 (lower is better)
Translates to: QGEASFQHEWAAVEPCFQSISFS*AAFSFT
Trigger: GGTGAACGAGAAAGCTGCCCATGAGAAAGATATGGA...CTGGAAACAGGGTTCCACAGCAGCCCATTCGTGCTGAAAACTGGCTTCCCCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CCA 90 bp GTTTCTGAATGGTCCACTCACATGCTGCCATTGCGATTTGCCGATGGGCACTACTGCTTGGAGGCGGAATaGTACACAGCCACTATCTGC +
Preference number: 4 (lower is better)
Translates to: VSEWSTHMLPLRFADGHYCLEAE*YTATIC
Trigger: GCAGATAGTGGCTGTGTACCATTCCGCCTCCAAGCA...GTAGTGCCCATCGGCAAATCGCAATGGCAGCATGTGAGTGGACCATTCAGAAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CCA 90 bp GCACGAATGGGCTGCTGTGGAACCCTGTTTCCAGTTGTCAAGACAGACTTGGCACTGATGTTCTTCCGCTaGGCTTTTGTGAAGTGGTCC +
Preference number: 4 (lower is better)
Translates to: ARMGCCGTLFPVVKTDLALMFFR*AFVKWS
Trigger: GGACCACTTCACAAAAGCCCAGCGGAAGAACATCAG...TGCCAAGTCTGTCTTGACAACTGGAAACAGGGTTCCACAGCAGCCCATTCGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CCA 90 bp GCTGGCAAGTTAGAGATTTGTAGGGCAGGCCGGCAGGCTGGAAGTTCTGGCAGGGGATTGGAAAGACAATaGCAGTTACACAGAGGACTT +
Preference number: 4 (lower is better)
Translates to: AGKLEICRAGRQAGSSGRGLERQ*QLHRGL
Trigger: AAGTCCTCTGTGTAACTGCCATTGTCTTTCCAATCC...CCTGCCAGAACTTCCAGCCTGCCGGCCTGCCCTACAAATCTCTAACTTGCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394363.6
CDS-3UTR CCA 90 bp TGCCTCAGGACATTCGCCCCAAACCTCCATCCTCTCTGTTTACTTTCCACCAAGCTACCAAGGTGTCTCTaGCAATTCGCACTCCAGGTG +
Preference number: 4 (lower is better)
Translates to: CLRTFAPNLHPLCLLSTKLPRCL*QFALQV
Trigger: CACCTGGAGTGCGAATTGCCAGAGACACCTTGGTAG...CTTGGTGGAAAGTAAACAGAGAGGATGGAGGTTTGGGGCGAATGTCCTGAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CCA 90 bp CCTCAGGACATTCGCCCCAAACCTCCATCCTCTCTGTTTACTTTCCACCAAGCACTACCAAGGTGTCTCTaGCAATTCGCACTCCAGGTG +
Preference number: 4 (lower is better)
Translates to: PQDIRPKPPSSLFTFHQALPRCL*QFALQV
Trigger: CACCTGGAGTGCGAATTGCCAGAGACACCTTGGTAG...TGCTTGGTGGAAAGTAAACAGAGAGGATGGAGGTTTGGGGCGAATGTCCTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR TCA 90 bp CAGGGGGAAGCCAGTTTTCAGCACGAATGGGCTGCTGTGGAACCCTGTTTCCAGGTGTTCTCCAAGAATTaGTCTCAAATCAGGTTCCCT +
Preference number: 4 (lower is better)
Translates to: QGEASFQHEWAAVEPCFQVFSKN*SQIRFP
Trigger: AGGGAACCTGATTTGAGATCAATTCTTGGAGAACAC...CTGGAAACAGGGTTCCACAGCAGCCCATTCGTGCTGAAAACTGGCTTCCCCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000370935.5
ENST00000394363.6
CDS-3UTR TCA 90 bp ACATGCTGCCATTGCGATTTGCCGATGGGCACTACCAAGGTGTCTCTGGCAATTTCTTGCGAATGGCAATaGTCTCTCCACACTGCTCGA +
Preference number: 4 (lower is better)
Translates to: TCCHCDLPMGTTKVSLAISCEWQ*SLHTAR
Trigger: TCGAGCAGTGTGGAGAGATCATTGCCATTCGCAAGA...AATTGCCAGAGACACCTTGGTAGTGCCCATCGGCAAATCGCAATGGCAGCATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR TCA 90 bp GTTTTCAGCACGAATGGGCTGCTGTGGAACCCTGTTTCCAGTTGTCAAGACAGATTCGCTATCCTGGTTTaGGGCACACAGCCTAGAAGC +
Preference number: 4 (lower is better)
Translates to: VFSTNGLLWNPVSSCQDRFAILV*GTQPRS
Trigger: GCTTCTAGGCTGTGTGCCTCAAACCAGGATAGCGAA...TCTGTCTTGACAACTGGAAACAGGGTTCCACAGCAGCCCATTCGTGCTGAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR TCA 90 bp CCACTCACATGCTGCCATTGCGATTTGCCGATGGGCACTACCAAGGTGTCTCTGTGCAATTCAACACACTaGCAACAGAAGCAAAGGGAC +
Preference number: 4 (lower is better)
Translates to: PLTCCHCDLPMGTTKVSLCNSTH*QQKQRD
Trigger: GTCCCTTTGCTTCTGTTGTCAGTGTGTTGAATTGCA...CAGAGACACCTTGGTAGTGCCCATCGGCAAATCGCAATGGCAGCATGTGAGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR GCA 90 bp GTTTCTGAATGGTCCACTCACATGCTGCCATTGCGATTTGCCGATGGGCACTACCTGGCACTACCAAACTaGAGGGGCTCGTTGTTGTTA +
Preference number: 4 (lower is better)
Translates to: VSEWSTHMLPLRFADGHYLALPN*RGSLLL
Trigger: TAACAACAACGAGCCCCTGCAGTTTGGTAGTGCCAG...GTAGTGCCCATCGGCAAATCGCAATGGCAGCATGTGAGTGGACCATTCAGAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394363.6
CDS-3UTR GCA 90 bp GGCTGCTGTGGAACCCTGTTTCCAGTTGTCAAGACAGACTTGGCATCTTTTTCCTGGTCTTTCTCGGGTTaGAGGAGGTGGGAGATTTGG +
Preference number: 4 (lower is better)
Translates to: GCCGTLFPVVKTDLASFSWSFSG*RRWEIW
Trigger: CCAAATCTCCCACCTCCTGCAACCCGAGAAAGACCA...GGAAAAAGATGCCAAGTCTGTCTTGACAACTGGAAACAGGGTTCCACAGCAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR GCA 90 bp ACCACCACCACACACAATAAAGACCATCTCTGCCTCAGGACATTCGCCCCAAACGTCATCTCGAGCCTGTaGGAAATCAACGTGGAGTCT +
Preference number: 4 (lower is better)
Translates to: TTTTHNKDHLCLRTFAPNVISSL*EINVES
Trigger: AGACTCCACGTTGATTTCGCACAGGCTCGAGATGAC...GTTTGGGGCGAATGTCCTGAGGCAGAGATGGTCTTTATTGTGTGTGGTGGTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR GCA 90 bp GCACGAATGGGCTGCTGTGGAACCCTGTTTCCAGTTGTCAAGACAGACTTGGCATCCTGCTTGAAGGTATaGTGGAGTCTACCCATGAGA +
Preference number: 4 (lower is better)
Translates to: ARMGCCGTLFPVVKTDLASCLKV*WSLPMR
Trigger: TCTCATGGGTAGACTCCAGCATACCTTCAAGCAGGA...TGCCAAGTCTGTCTTGACAACTGGAAACAGGGTTCCACAGCAGCCCATTCGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR GCA 90 bp GGGCTGCTGTGGAACCCTGTTTCCAGTTGTCAAGACAGACTTGGCATCTTTTTCCTCACATGCTGCCATTaGGATTTGCCGATGGGCACT +
Preference number: 4 (lower is better)
Translates to: GLLWNPVSSCQDRLGIFFLTCCH*DLPMGT
Trigger: AGTGCCCATCGGCAAATCGCAATGGCAGCATGTGAG...GAAAAAGATGCCAAGTCTGTCTTGACAACTGGAAACAGGGTTCCACAGCAGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR GCA 90 bp AGTCCAAAGGCAGTCTCGAAGCAGAATTCCCTCCTCAGGGGACTTCAGTCTTTTGGTCCACTCACATGCTaGCATTGCGATTTGCCGATG +
Preference number: 4 (lower is better)
Translates to: SPKAVSKQNSLLRGLQSFGPLTC*HCDLPM
Trigger: CATCGGCAAATCGCAATGGCAGCATGTGAGTGGACC...AAAAGACTGAAGTCCCCTGAGGAGGGAATTCTGCTTCGAGACTGCCTTTGGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394363.6
CDS-3UTR GCA 90 bp CAGGGGGAAGCCAGTTTTCAGCACGAATGGGCTGCTGTGGAACCCTGTTTCCAGAGCATTGATGAGAGATaGATCAGTGAGCAAGCTAGT +
Preference number: 4 (lower is better)
Translates to: QGEASFQHEWAAVEPCFQSIDER*ISEQAS
Trigger: ACTAGCTTGCTCACTGATGCATCTCTCATCAATGCT...CTGGAAACAGGGTTCCACAGCAGCCCATTCGTGCTGAAAACTGGCTTCCCCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CCA 90 bp CAGGGGGAAGCCAGTTTTCAGCACGAATGGGCTGCTGTGGAACCCTGTTTCCAGCAAACCAGGCATCATTaGAGTTATTGGTGGAATTCC +
Preference number: 4 (lower is better)
Translates to: QGEASFQHEWAAVEPCFQQTRHH*SYWWNS
Trigger: GGAATTCCACCAATAACTCCAATGATGCCTGGTTTG...CTGGAAACAGGGTTCCACAGCAGCCCATTCGTGCTGAAAACTGGCTTCCCCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CCA 90 bp GTTTCTGAATGGTCCACTCACATGCTGCCATTGCGATTTGCCGATGGGCACTACTGGGAGATTTGGATTTaGAGGGAAGAGCGTGCAGCT +
Preference number: 4 (lower is better)
Translates to: VSEWSTHMLPLRFADGHYWEIWI*REERAA
Trigger: AGCTGCACGCTCTTCCCTCCAAATCCAAATCTCCCA...GTAGTGCCCATCGGCAAATCGCAATGGCAGCATGTGAGTGGACCATTCAGAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CCA 90 bp ACATGCTGCCATTGCGATTTGCCGATGGGCACTACCAAGGTGTCTCTGGCAATTTGTTTTGCATCCTGGTaGTCTTTCTCGGGTTGCAGG +
Preference number: 4 (lower is better)
Translates to: TCCHCDLPMGTTKVSLAICFASW*SFSGCR
Trigger: CCTGCAACCCGAGAAAGACCACCAGGATGCAAAACA...AATTGCCAGAGACACCTTGGTAGTGCCCATCGGCAAATCGCAATGGCAGCATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CCA 90 bp ACCACCACCACACACAATAAAGACCATCTCTGCCTCAGGACATTCGCCCCAAACTGTTTTGCATCCTGGTaGTCTTTCTCGGGTTGCAGG +
Preference number: 4 (lower is better)
Translates to: TTTTHNKDHLCLRTFAPNCFASW*SFSGCR
Trigger: CCTGCAACCCGAGAAAGACCACCAGGATGCAAAACA...GTTTGGGGCGAATGTCCTGAGGCAGAGATGGTCTTTATTGTGTGTGGTGGTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CCA 90 bp GGCTGCTGTGGAACCCTGTTTCCAGTTGTCAAGACAGACTTGGCATCTTTTTCCCACTGGGGGTGGAGATaGTGGACGCAATCTTTCTTC +
Preference number: 4 (lower is better)
Translates to: GCCGTLFPVVKTDLASFSHWGWR*WTQSFF
Trigger: GAAGAAAGATTGCGTCCACCATCTCCACCCCCAGTG...GGAAAAAGATGCCAAGTCTGTCTTGACAACTGGAAACAGGGTTCCACAGCAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CCA 90 bp GTTTCTGAATGGTCCACTCACATGCTGCCATTGCGATTTGCCGATGGGCACTACGGGTATTCGCTATCCTaGTTTGAGGCACACAGCCTA +
Preference number: 4 (lower is better)
Translates to: VSEWSTHMLPLRFADGHYGYSLS*FEAHSL
Trigger: TAGGCTGTGTGCCTCAAACCAGGATAGCGAATACCC...GTAGTGCCCATCGGCAAATCGCAATGGCAGCATGTGAGTGGACCATTCAGAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CCA 90 bp CAGGGGGAAGCCAGTTTTCAGCACGAATGGGCTGCTGTGGAACCCTGTTTCCAGGACACTCCACATCGCTaGTGCAGATCTTATTATCAA +
Preference number: 4 (lower is better)
Translates to: QGEASFQHEWAAVEPCFQDTPHR*CRSYYQ
Trigger: TTGATAATAAGATCTGCACCAGCGATGTGGAGTGTC...CTGGAAACAGGGTTCCACAGCAGCCCATTCGTGCTGAAAACTGGCTTCCCCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CCA 90 bp TGCCTCAGGACATTCGCCCCAAACCTCCATCCTCTCTGTTTACTTTCCACCAAGATTGCGATTTGCCGATaGGCACTACCAAGGTGTCTC +
Preference number: 4 (lower is better)
Translates to: CLRTFAPNLHPLCLLSTKIAICR*ALPRCL
Trigger: GAGACACCTTGGTAGTGCCCATCGGCAAATCGCAAT...CTTGGTGGAAAGTAAACAGAGAGGATGGAGGTTTGGGGCGAATGTCCTGAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CCA 90 bp ACCACCACCACACACAATAAAGACCATCTCTGCCTCAGGACATTCGCCCCAAACATTGCGATTTGCCGATaGGCACTACCAAGGTGTCTC +
Preference number: 4 (lower is better)
Translates to: TTTTHNKDHLCLRTFAPNIAICR*ALPRCL
Trigger: GAGACACCTTGGTAGTGCCCATCGGCAAATCGCAAT...GTTTGGGGCGAATGTCCTGAGGCAGAGATGGTCTTTATTGTGTGTGGTGGTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CCA 90 bp ACCACCACCACACACAATAAAGACCATCTCTGCCTCAGGACATTCGCCCCAAACAGTTTTCAGCACGAATaGGCTGCTGTGGAACCCTGT +
Preference number: 4 (lower is better)
Translates to: TTTTHNKDHLCLRTFAPNSFQHE*AAVEPC
Trigger: ACAGGGTTCCACAGCAGCCCATTCGTGCTGAAAACT...GTTTGGGGCGAATGTCCTGAGGCAGAGATGGTCTTTATTGTGTGTGGTGGTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
3UTR CAA 72 bp GCAGAAGTTTCTGAATGGTCCACTCACATGCTGCCATaGCGATTTGCCGATGGGCACTACCAAGGTGTCTCT +
Preference number: 4 (lower is better)
Translates to: AEVSEWSTHMLP*RFADGHYQGVS
Trigger: AGAGACACCTTGGTAGTGCCCATCGGCAAATCGCAATGGCAGCATGTGAGTGGACCATTCAGAAACTTCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338144.7
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR TCA 90 bp GGCTGCTGTGGAACCCTGTTTCCAGTTGTCAAGACAGACTTGGCATCTTTTTCCTCTTGCGAATGGCAATaGTCTCTCCACACTGCTCGA +
Preference number: 4 (lower is better)
Translates to: GCCGTLFPVVKTDLASFSSCEWQ*SLHTAR
Trigger: TCGAGCAGTGTGGAGAGATCATTGCCATTCGCAAGA...GGAAAAAGATGCCAAGTCTGTCTTGACAACTGGAAACAGGGTTCCACAGCAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR TCA 90 bp GCACGAATGGGCTGCTGTGGAACCCTGTTTCCAGTTGTCAAGACAGACTTGGCATGCCTTGTTCTTGCTTaGGCAGTTCTACTTCATTCC +
Preference number: 4 (lower is better)
Translates to: ARMGCCGTLFPVVKTDLACLVLA*AVLLHS
Trigger: GGAATGAAGTAGAACTGCTCAAGCAAGAACAAGGCA...TGCCAAGTCTGTCTTGACAACTGGAAACAGGGTTCCACAGCAGCCCATTCGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR TCA 90 bp CCCGAGACTGATGAATCAAAGCCTTCCGTAGCATTGATGAGAGATGCATCAGTGTTCGCTATCCTGGTTTaGGGCACACAGCCTAGAAGC +
Preference number: 4 (lower is better)
Translates to: PETDESKPSVALMRDASVFAILV*GTQPRS
Trigger: GCTTCTAGGCTGTGTGCCTCAAACCAGGATAGCGAA...CACTGATGCATCTCTCATCAATGCTACGGAAGGCTTTGATTCATCAGTCTCGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR TCA 90 bp ACCACCACCACACACAATAAAGACCATCTCTGCCTCAGGACATTCGCCCCAAACTTGTCGTTTAAAAGGTaGACCTGGTCAGGCACCTTC +
Preference number: 4 (lower is better)
Translates to: TTTTHNKDHLCLRTFAPNLSFKR*TWSGTF
Trigger: GAAGGTGCCTGACCAGGTTCACCTTTTAAACGACAA...GTTTGGGGCGAATGTCCTGAGGCAGAGATGGTCTTTATTGTGTGTGGTGGTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR TCA 90 bp GTTTCTGAATGGTCCACTCACATGCTGCCATTGCGATTTGCCGATGGGCACTACTTGTCGTTTAAAAGGTaGACCTGGTCAGGCACCTTC +
Preference number: 4 (lower is better)
Translates to: VSEWSTHMLPLRFADGHYLSFKR*TWSGTF
Trigger: GAAGGTGCCTGACCAGGTTCACCTTTTAAACGACAA...GTAGTGCCCATCGGCAAATCGCAATGGCAGCATGTGAGTGGACCATTCAGAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR TCA 90 bp TGCCTCAGGACATTCGCCCCAAACCTCCATCCTCTCTGTTTACTTTCCACCAAGCCAAGCAGAAGTTTCTaGATGGTCCACTCACATGCT +
Preference number: 4 (lower is better)
Translates to: CLRTFAPNLHPLCLLSTKPSRSF*MVHSHA
Trigger: AGCATGTGAGTGGACCATTCAGAAACTTCTGCTTGG...CTTGGTGGAAAGTAAACAGAGAGGATGGAGGTTTGGGGCGAATGTCCTGAGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR TCA 90 bp ACCACCACCACACACAATAAAGACCATCTCTGCCTCAGGACATTCGCCCCAAACAGTGTAAAATTAACCTaGGCTTCCTGCTGGTGCCAC +
Preference number: 4 (lower is better)
Translates to: TTTTHNKDHLCLRTFAPNSVKLT*ASCWCH
Trigger: GTGGCACCAGCAGGAAGCTCAGGTTAATTTTACACT...GTTTGGGGCGAATGTCCTGAGGCAGAGATGGTCTTTATTGTGTGTGGTGGTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR GCA 90 bp GTTTTCAGCACGAATGGGCTGCTGTGGAACCCTGTTTCCAGTTGTCAAGACAGACATTGCTGTGGCCCATaGAGTTGGATCAGACATAGG +
Preference number: 4 (lower is better)
Translates to: VFSTNGLLWNPVSSCQDRHCCGP*SWIRHR
Trigger: CCTATGTCTGATCCAACTGCATGGGCCACAGCAATG...TCTGTCTTGACAACTGGAAACAGGGTTCCACAGCAGCCCATTCGTGCTGAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR GCA 90 bp GCCGGCAGGCTGGAAGTTCTGGCAGGAGTTGGATGTTGCAGTTTTGAGTCCAAATCCAAGATTATTCATTaGTGTGGCCCATGCAGTTGG +
Preference number: 4 (lower is better)
Translates to: AGRLEVLAGVGCCSFESKSKIIH*CGPCSW
Trigger: CCAACTGCATGGGCCACAGCAATGAATAATCTTGGA...TTTGGACTCAAAACTGCAACATCCAACTCCTGCCAGAACTTCCAGCCTGCCGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394363.6
CDS-3UTR GCA 90 bp GGGCTGCTGTGGAACCCTGTTTCCAGTTGTCAAGACAGACTTGGCATCTTTTTCGTCATCTCGAGCCTGTaGGAAATCAACGTGGAGTCT +
Preference number: 4 (lower is better)
Translates to: GLLWNPVSSCQDRLGIFFVISSL*EINVES
Trigger: AGACTCCACGTTGATTTCGCACAGGCTCGAGATGAC...GAAAAAGATGCCAAGTCTGTCTTGACAACTGGAAACAGGGTTCCACAGCAGCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR GCA 90 bp AAGCCACAAACCATGCTTTGTCGTTTAAAAGGTGAACCTGGTCAGGCACCTTCTTGTGAAGTGGTCCCATaGCTTCTGCTTGGAGGCGGA +
Preference number: 4 (lower is better)
Translates to: KPQTMLCRLKGEPGQAPSCEVVP*LLLGGG
Trigger: TCCGCCTCCAAGCAGAAGGCATGGGACCACTTCACA...AGAAGGTGCCTGACCAGGTTCACCTTTTAAACGACAAAGCATGGTTTGTGGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR GCA 90 bp GCCGGCAGGCTGGAAGTTCTGGCAGGAGTTGGATGTTGCAGTTTTGAGTCCAAATTGAGTAGATGCTGTTaGATTCCTTGCAGGGCTTGT +
Preference number: 4 (lower is better)
Translates to: AGRLEVLAGVGCCSFESKLSRCC*IPCRAC
Trigger: ACAAGCCCTGCAAGGAATGCAACAGCATCTACTCAA...TTTGGACTCAAAACTGCAACATCCAACTCCTGCCAGAACTTCCAGCCTGCCGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394363.6
CDS-3UTR GCA 90 bp CCACTCACATGCTGCCATTGCGATTTGCCGATGGGCACTACCAAGGTGTCTCTGACTCCACATCGCTGGTaGAGATCTTATTATCAAGAC +
Preference number: 4 (lower is better)
Translates to: PLTCCHCDLPMGTTKVSLTPHRW*RSYYQD
Trigger: GTCTTGATAATAAGATCTGCACCAGCGATGTGGAGT...CAGAGACACCTTGGTAGTGCCCATCGGCAAATCGCAATGGCAGCATGTGAGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR GCA 90 bp AAGCCACAAACCATGCTTTGTCGTTTAAAAGGTGAACCTGGTCAGGCACCTTCTGCTGCCATTGCGATTTaGCGATGGGCACTACCAAGG +
Preference number: 4 (lower is better)
Translates to: KPQTMLCRLKGEPGQAPSAAIAI*RWALPR
Trigger: CCTTGGTAGTGCCCATCGGCAAATCGCAATGGCAGC...AGAAGGTGCCTGACCAGGTTCACCTTTTAAACGACAAAGCATGGTTTGTGGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR GCA 90 bp CAAGCAGAAGTTTCTGAATGGTCCACTCACATGCTGCCATTGCGATTTGCCGATTCAGCACGAATGGGCTaGTGTGGAACCCTGTTTCCA +
Preference number: 4 (lower is better)
Translates to: QAEVSEWSTHMLPLRFADSARMG*CGTLFP
Trigger: TGGAAACAGGGTTCCACAGCAGCCCATTCGTGCTGA...ATCGGCAAATCGCAATGGCAGCATGTGAGTGGACCATTCAGAAACTTCTGCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CCA 90 bp GCACGAATGGGCTGCTGTGGAACCCTGTTTCCAGTTGTCAAGACAGACTTGGCAATCTGGAGGAATTGGTaGAGGTACTATTCCCAAACC +
Preference number: 4 (lower is better)
Translates to: ARMGCCGTLFPVVKTDLAIWRNW*RYYSQT
Trigger: GGTTTGGGAATAGTACCTCCACCAATTCCTCCAGAT...TGCCAAGTCTGTCTTGACAACTGGAAACAGGGTTCCACAGCAGCCCATTCGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CCA 90 bp GCACGAATGGGCTGCTGTGGAACCCTGTTTCCAGTTGTCAAGACAGACTTGGCATACTACTGGCATATCTaGAGGAATTGGTGGAGGTAC +
Preference number: 4 (lower is better)
Translates to: ARMGCCGTLFPVVKTDLAYYWHI*RNWWRY
Trigger: GTACCTCCACCAATTCCTCCAGATATGCCAGTAGTA...TGCCAAGTCTGTCTTGACAACTGGAAACAGGGTTCCACAGCAGCCCATTCGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CCA 90 bp CAGGGGGAAGCCAGTTTTCAGCACGAATGGGCTGCTGTGGAACCCTGTTTCCAGGATCTCTTTTACTACTaGCATATCTGGAGGAATTGG +
Preference number: 4 (lower is better)
Translates to: QGEASFQHEWAAVEPCFQDLFYY*HIWRNW
Trigger: CCAATTCCTCCAGATATGCCAGTAGTAAAAGAGATC...CTGGAAACAGGGTTCCACAGCAGCCCATTCGTGCTGAAAACTGGCTTCCCCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CCA 90 bp CCTCAGGACATTCGCCCCAAACCTCCATCCTCTCTGTTTACTTTCCACCAAGCATACTGTTTTGCATCCTaGTGGTCTTTCTCGGGTTGC +
Preference number: 4 (lower is better)
Translates to: PQDIRPKPPSSLFTFHQAYCFAS*WSFSGC
Trigger: GCAACCCGAGAAAGACCACCAGGATGCAAAACAGTA...TGCTTGGTGGAAAGTAAACAGAGAGGATGGAGGTTTGGGGCGAATGTCCTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CCA 90 bp GGCTGCTGTGGAACCCTGTTTCCAGTTGTCAAGACAGACTTGGCATCTTTTTCCTGTGCGAAATCAACGTaGAGTCTGCCTGTGTCCTTC +
Preference number: 4 (lower is better)
Translates to: GCCGTLFPVVKTDLASFSCAKST*SLPVSF
Trigger: GAAGGACACAGGCAGACTCCACGTTGATTTCGCACA...GGAAAAAGATGCCAAGTCTGTCTTGACAACTGGAAACAGGGTTCCACAGCAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CCA 90 bp GGGCTGCTGTGGAACCCTGTTTCCAGTTGTCAAGACAGACTTGGCATCTTTTTCTGGGGGTGGAGATGGTaGACGCAATCTTTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: GLLWNPVSSCQDRLGIFFWGWRW*TQSFFF
Trigger: GAAGAAGAAAGATTGCGTCCACCATCTCCACCCCCA...GAAAAAGATGCCAAGTCTGTCTTGACAACTGGAAACAGGGTTCCACAGCAGCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CCA 90 bp CAAGCAGAAGTTTCTGAATGGTCCACTCACATGCTGCCATTGCGATTTGCCGATCACTGGGGGTGGAGATaGTGGACGCAATCTTTCTTC +
Preference number: 4 (lower is better)
Translates to: QAEVSEWSTHMLPLRFADHWGWR*WTQSFF
Trigger: GAAGAAAGATTGCGTCCACCATCTCCACCCCCAGTG...ATCGGCAAATCGCAATGGCAGCATGTGAGTGGACCATTCAGAAACTTCTGCTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CCA 90 bp CCCGAGACTGATGAATCAAAGCCTTCCGTAGCATTGATGAGAGATGCATCAGTGTGCTTGGAGGCGGAATaGTACACAGCCACTATCTGC +
Preference number: 4 (lower is better)
Translates to: PETDESKPSVALMRDASVCLEAE*YTATIC
Trigger: GCAGATAGTGGCTGTGTACCATTCCGCCTCCAAGCA...CACTGATGCATCTCTCATCAATGCTACGGAAGGCTTTGATTCATCAGTCTCGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CCA 90 bp GTTTTCAGCACGAATGGGCTGCTGTGGAACCCTGTTTCCAGTTGTCAAGACAGATGGGCTTTTGTGAAGTaGTCCCATGCCTTCTGCTTG +
Preference number: 4 (lower is better)
Translates to: VFSTNGLLWNPVSSCQDRWAFVK*SHAFCL
Trigger: CAAGCAGAAGGCATGGGACCACTTCACAAAAGCCCA...TCTGTCTTGACAACTGGAAACAGGGTTCCACAGCAGCCCATTCGTGCTGAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CCA 90 bp GGGCTGCTGTGGAACCCTGTTTCCAGTTGTCAAGACAGACTTGGCATCTTTTTCGGGTATTCGCTATCCTaGTTTGAGGCACACAGCCTA +
Preference number: 4 (lower is better)
Translates to: GLLWNPVSSCQDRLGIFFGYSLS*FEAHSL
Trigger: TAGGCTGTGTGCCTCAAACCAGGATAGCGAATACCC...GAAAAAGATGCCAAGTCTGTCTTGACAACTGGAAACAGGGTTCCACAGCAGCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CCA 90 bp GGCTGCTGTGGAACCCTGTTTCCAGTTGTCAAGACAGACTTGGCATCTTTTTCCGGGTATTCGCTATCCTaGTTTGAGGCACACAGCCTA +
Preference number: 4 (lower is better)
Translates to: GCCGTLFPVVKTDLASFSGYSLS*FEAHSL
Trigger: TAGGCTGTGTGCCTCAAACCAGGATAGCGAATACCC...GGAAAAAGATGCCAAGTCTGTCTTGACAACTGGAAACAGGGTTCCACAGCAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CCA 90 bp CCACTCACATGCTGCCATTGCGATTTGCCGATGGGCACTACCAAGGTGTCTCTGGACACTCCACATCGCTaGTGCAGATCTTATTATCAA +
Preference number: 4 (lower is better)
Translates to: PLTCCHCDLPMGTTKVSLDTPHR*CRSYYQ
Trigger: TTGATAATAAGATCTGCACCAGCGATGTGGAGTGTC...CAGAGACACCTTGGTAGTGCCCATCGGCAAATCGCAATGGCAGCATGTGAGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CCA 90 bp CCTCAGGACATTCGCCCCAAACCTCCATCCTCTCTGTTTACTTTCCACCAAGCATGCTTGAAGGTATGCTaGAGTCTACCCATGAGACAC +
Preference number: 4 (lower is better)
Translates to: PQDIRPKPPSSLFTFHQACLKVC*SLPMRH
Trigger: GTGTCTCATGGGTAGACTCCAGCATACCTTCAAGCA...TGCTTGGTGGAAAGTAAACAGAGAGGATGGAGGTTTGGGGCGAATGTCCTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CCA 90 bp GGCTGCTGTGGAACCCTGTTTCCAGTTGTCAAGACAGACTTGGCATCTTTTTCCATTGCGATTTGCCGATaGGCACTACCAAGGTGTCTC +
Preference number: 4 (lower is better)
Translates to: GCCGTLFPVVKTDLASFSIAICR*ALPRCL
Trigger: GAGACACCTTGGTAGTGCCCATCGGCAAATCGCAAT...GGAAAAAGATGCCAAGTCTGTCTTGACAACTGGAAACAGGGTTCCACAGCAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CCA 90 bp GTTTCTGAATGGTCCACTCACATGCTGCCATTGCGATTTGCCGATGGGCACTACGCAGAAGTTTCTGAATaGTCCACTCACATGCTGCCA +
Preference number: 4 (lower is better)
Translates to: VSEWSTHMLPLRFADGHYAEVSE*STHMLP
Trigger: TGGCAGCATGTGAGTGGACCATTCAGAAACTTCTGC...GTAGTGCCCATCGGCAAATCGCAATGGCAGCATGTGAGTGGACCATTCAGAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CCA 90 bp AGTCCAAAGGCAGTCTCGAAGCAGAATTCCCTCCTCAGGGGACTTCAGTCTTTTAGTTTTCAGCACGAATaGGCTGCTGTGGAACCCTGT +
Preference number: 4 (lower is better)
Translates to: SPKAVSKQNSLLRGLQSFSFQHE*AAVEPC
Trigger: ACAGGGTTCCACAGCAGCCCATTCGTGCTGAAAACT...AAAAGACTGAAGTCCCCTGAGGAGGGAATTCTGCTTCGAGACTGCCTTTGGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394363.6
CDS-3UTR CCA 90 bp CAAGCAGAAGTTTCTGAATGGTCCACTCACATGCTGCCATTGCGATTTGCCGATGCAGGCTGGAAGTTCTaGCAGGAGTTGGATGTTGCA +
Preference number: 4 (lower is better)
Translates to: QAEVSEWSTHMLPLRFADAGWKF*QELDVA
Trigger: TGCAACATCCAACTCCTGCCAGAACTTCCAGCCTGC...ATCGGCAAATCGCAATGGCAGCATGTGAGTGGACCATTCAGAAACTTCTGCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394363.6
3UTR CAA 72 bp TTTCTGAATGGTCCACTCACATGCTGCCATTGCGATTaGCCGATGGGCACTACCAAGGTGTCTCTGGCAATT +
Preference number: 4 (lower is better)
Translates to: FLNGPLTCCHCD*PMGTTKVSLAI
Trigger: AATTGCCAGAGACACCTTGGTAGTGCCCATCGGCAAATCGCAATGGCAGCATGTGAGTGGACCATTCAGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338144.7
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR TCA 90 bp AATATTAATATAAATCCCTTCTGCCACTGTGTGCGTGCGTGTGTGTGTTTGTGCGCTGGAGTCTACCCATaGGACACTCCACATCGCTGG +
Preference number: 4 (lower is better)
Translates to: NININPFCHCVRACVCLCAGVYP*DTPHRW
Trigger: CCAGCGATGTGGAGTGTCTCATGGGTAGACTCCAGC...GCACAAACACACACACGCACGCACACAGTGGCAGAAGGGATTTATATTAATATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR TCA 90 bp CCACTCACATGCTGCCATTGCGATTTGCCGATGGGCACTACCAAGGTGTCTCTGTTAAAGACAACCAATTaGCAGAAAGGGGAGGAAGTT +
Preference number: 4 (lower is better)
Translates to: PLTCCHCDLPMGTTKVSLLKTTN*QKGEEV
Trigger: AACTTCCTCCCCTTTCTGTCAATTGGTTGTCTTTAA...CAGAGACACCTTGGTAGTGCCCATCGGCAAATCGCAATGGCAGCATGTGAGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR TCA 90 bp CAAGCAGAAGTTTCTGAATGGTCCACTCACATGCTGCCATTGCGATTTGCCGATCACTCCAGGTGGAGCTaGCCTATTTGTAGAAAGCCT +
Preference number: 4 (lower is better)
Translates to: QAEVSEWSTHMLPLRFADHSRWS*PICRKP
Trigger: AGGCTTTCTACAAATAGGTCAGCTCCACCTGGAGTG...ATCGGCAAATCGCAATGGCAGCATGTGAGTGGACCATTCAGAAACTTCTGCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR TCA 90 bp GGCTGCTGTGGAACCCTGTTTCCAGTTGTCAAGACAGACTTGGCATCTTTTTCCAGTGTAAAATTAACCTaGGCTTCCTGCTGGTGCCAC +
Preference number: 4 (lower is better)
Translates to: GCCGTLFPVVKTDLASFSSVKLT*ASCWCH
Trigger: GTGGCACCAGCAGGAAGCTCAGGTTAATTTTACACT...GGAAAAAGATGCCAAGTCTGTCTTGACAACTGGAAACAGGGTTCCACAGCAGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR GCA 90 bp CCTCAGGACATTCGCCCCAAACCTCCATCCTCTCTGTTTACTTTCCACCAAGCATCCAAGATTATTCATTaGTGTGGCCCATGCAGTTGG +
Preference number: 4 (lower is better)
Translates to: PQDIRPKPPSSLFTFHQASKIIH*CGPCSW
Trigger: CCAACTGCATGGGCCACAGCAATGAATAATCTTGGA...TGCTTGGTGGAAAGTAAACAGAGAGGATGGAGGTTTGGGGCGAATGTCCTGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR GCA 90 bp CCTCAGGACATTCGCCCCAAACCTCCATCCTCTCTGTTTACTTTCCACCAAGCAGGCAATTCCCAGCGGTaGCATTCCAAGATTATTCAT +
Preference number: 4 (lower is better)
Translates to: PQDIRPKPPSSLFTFHQAGNSQR*HSKIIH
Trigger: ATGAATAATCTTGGAATGGCACCGCTGGGAATTGCC...TGCTTGGTGGAAAGTAAACAGAGAGGATGGAGGTTTGGGGCGAATGTCCTGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR GCA 90 bp CAAGCAGAAGTTTCTGAATGGTCCACTCACATGCTGCCATTGCGATTTGCCGATGTCATCTCGAGCCTGTaGGAAATCAACGTGGAGTCT +
Preference number: 4 (lower is better)
Translates to: QAEVSEWSTHMLPLRFADVISSL*EINVES
Trigger: AGACTCCACGTTGATTTCGCACAGGCTCGAGATGAC...ATCGGCAAATCGCAATGGCAGCATGTGAGTGGACCATTCAGAAACTTCTGCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR GCA 90 bp GCTGGCAAGTTAGAGATTTGTAGGGCAGGCCGGCAGGCTGGAAGTTCTGGCAGGTTTCAGCAACAATGCTaGATTCATGATCTGAATAGT +
Preference number: 4 (lower is better)
Translates to: AGKLEICRAGRQAGSSGRFQQQC*IHDLNS
Trigger: ACTATTCAGATCATGAATGCAGCATTGTTGCTGAAA...CCTGCCAGAACTTCCAGCCTGCCGGCCTGCCCTACAAATCTCTAACTTGCCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394363.6
CDS-3UTR GCA 90 bp GTTTCTGAATGGTCCACTCACATGCTGCCATTGCGATTTGCCGATGGGCACTACATTCCAGAAAGGGCCTaGTTGAACTTCTCCTTTGCT +
Preference number: 4 (lower is better)
Translates to: VSEWSTHMLPLRFADGHYIPERA*LNFSFA
Trigger: AGCAAAGGAGAAGTTCAAGCAGGCCCTTTCTGGAAT...GTAGTGCCCATCGGCAAATCGCAATGGCAGCATGTGAGTGGACCATTCAGAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR GCA 90 bp ACATGCTGCCATTGCGATTTGCCGATGGGCACTACCAAGGTGTCTCTGGCAATTTGCAGGAGTTTCAGCTaGTGTTCTTTGTTAGGGTCA +
Preference number: 4 (lower is better)
Translates to: TCCHCDLPMGTTKVSLAICRSFS*CSLLGS
Trigger: TGACCCTAACAAAGAACAGCAGCTGAAACTCCTGCA...AATTGCCAGAGACACCTTGGTAGTGCCCATCGGCAAATCGCAATGGCAGCATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR GCA 90 bp CCTCAGGACATTCGCCCCAAACCTCCATCCTCTCTGTTTACTTTCCACCAAGCATGCAGGAGTTTCAGCTaGTGTTCTTTGTTAGGGTCA +
Preference number: 4 (lower is better)
Translates to: PQDIRPKPPSSLFTFHQACRSFS*CSLLGS
Trigger: TGACCCTAACAAAGAACAGCAGCTGAAACTCCTGCA...TGCTTGGTGGAAAGTAAACAGAGAGGATGGAGGTTTGGGGCGAATGTCCTGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR GCA 90 bp CCCGAGACTGATGAATCAAAGCCTTCCGTAGCATTGATGAGAGATGCATCAGTGTGCTGTTGCATTCCTTaGAGGGCTTGTTGCAGGAGT +
Preference number: 4 (lower is better)
Translates to: PETDESKPSVALMRDASVCCCIP*RACCRS
Trigger: ACTCCTGCAACAAGCCCTGCAAGGAATGCAACAGCA...CACTGATGCATCTCTCATCAATGCTACGGAAGGCTTTGATTCATCAGTCTCGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR GCA 90 bp ACCACCACCACACACAATAAAGACCATCTCTGCCTCAGGACATTCGCCCCAAACTTGAGTAGATGCTGTTaGATTCCTTGCAGGGCTTGT +
Preference number: 4 (lower is better)
Translates to: TTTTHNKDHLCLRTFAPNLSRCC*IPCRAC
Trigger: ACAAGCCCTGCAAGGAATGCAACAGCATCTACTCAA...GTTTGGGGCGAATGTCCTGAGGCAGAGATGGTCTTTATTGTGTGTGGTGGTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR GCA 90 bp TGCCTCAGGACATTCGCCCCAAACCTCCATCCTCTCTGTTTACTTTCCACCAAGTTGAGTAGATGCTGTTaGATTCCTTGCAGGGCTTGT +
Preference number: 4 (lower is better)
Translates to: CLRTFAPNLHPLCLLSTKLSRCC*IPCRAC
Trigger: ACAAGCCCTGCAAGGAATGCAACAGCATCTACTCAA...CTTGGTGGAAAGTAAACAGAGAGGATGGAGGTTTGGGGCGAATGTCCTGAGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR GCA 90 bp GTTTCTGAATGGTCCACTCACATGCTGCCATTGCGATTTGCCGATGGGCACTACTGGACTTTGAGTAGATaGTGTTGCATTCCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: VSEWSTHMLPLRFADGHYWTLSR*CCIPCR
Trigger: CCTGCAAGGAATGCAACAGCATCTACTCAAAGTCCA...GTAGTGCCCATCGGCAAATCGCAATGGCAGCATGTGAGTGGACCATTCAGAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR GCA 90 bp ACATGCTGCCATTGCGATTTGCCGATGGGCACTACCAAGGTGTCTCTGGCAATTACTCCAGTCATTTCCTaGTTGAAGGTATGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: TCCHCDLPMGTTKVSLAITPVIS*LKVCWS
Trigger: ACTCCAGCATACCTTCAAGCAGGAAATGACTGGAGT...AATTGCCAGAGACACCTTGGTAGTGCCCATCGGCAAATCGCAATGGCAGCATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR GCA 90 bp AAGCCACAAACCATGCTTTGTCGTTTAAAAGGTGAACCTGGTCAGGCACCTTCTTCAGCACGAATGGGCTaGTGTGGAACCCTGTTTCCA +
Preference number: 4 (lower is better)
Translates to: KPQTMLCRLKGEPGQAPSSARMG*CGTLFP
Trigger: TGGAAACAGGGTTCCACAGCAGCCCATTCGTGCTGA...AGAAGGTGCCTGACCAGGTTCACCTTTTAAACGACAAAGCATGGTTTGTGGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR GCA 90 bp GCACGAATGGGCTGCTGTGGAACCCTGTTTCCAGTTGTCAAGACAGACTTGGCAAGCATTGATGAGAGATaGATCAGTGAGCAAGCTAGT +
Preference number: 4 (lower is better)
Translates to: ARMGCCGTLFPVVKTDLASIDER*ISEQAS
Trigger: ACTAGCTTGCTCACTGATGCATCTCTCATCAATGCT...TGCCAAGTCTGTCTTGACAACTGGAAACAGGGTTCCACAGCAGCCCATTCGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR GCA 90 bp GGGCTGCTGTGGAACCCTGTTTCCAGTTGTCAAGACAGACTTGGCATCTTTTTCGCAGGAGTTGGATGTTaGAGTTTTGAGTCCAAAGGC +
Preference number: 4 (lower is better)
Translates to: GLLWNPVSSCQDRLGIFFAGVGC*SFESKG
Trigger: GCCTTTGGACTCAAAACTGCAACATCCAACTCCTGC...GAAAAAGATGCCAAGTCTGTCTTGACAACTGGAAACAGGGTTCCACAGCAGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394363.6
CDS-3UTR CCA 90 bp ACATGCTGCCATTGCGATTTGCCGATGGGCACTACCAAGGTGTCTCTGGCAATTATCTGGAGGAATTGGTaGAGGTACTATTCCCAAACC +
Preference number: 4 (lower is better)
Translates to: TCCHCDLPMGTTKVSLAIIWRNW*RYYSQT
Trigger: GGTTTGGGAATAGTACCTCCACCAATTCCTCCAGAT...AATTGCCAGAGACACCTTGGTAGTGCCCATCGGCAAATCGCAATGGCAGCATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CCA 90 bp CCCGAGACTGATGAATCAAAGCCTTCCGTAGCATTGATGAGAGATGCATCAGTGAGGAGGTGGGAGATTTaGATTTGGAGGGAAGAGCGT +
Preference number: 4 (lower is better)
Translates to: PETDESKPSVALMRDASVRRWEI*IWREER
Trigger: ACGCTCTTCCCTCCAAATCCAAATCTCCCACCTCCT...CACTGATGCATCTCTCATCAATGCTACGGAAGGCTTTGATTCATCAGTCTCGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CCA 90 bp AAGCCACAAACCATGCTTTGTCGTTTAAAAGGTGAACCTGGTCAGGCACCTTCTTCGGGTTGCAGGAGGTaGGAGATTTGGATTTGGAGG +
Preference number: 4 (lower is better)
Translates to: KPQTMLCRLKGEPGQAPSSGCRR*EIWIWR
Trigger: CCTCCAAATCCAAATCTCCCACCTCCTGCAACCCGA...AGAAGGTGCCTGACCAGGTTCACCTTTTAAACGACAAAGCATGGTTTGTGGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CCA 90 bp GGGCTGCTGTGGAACCCTGTTTCCAGTTGTCAAGACAGACTTGGCATCTTTTTCTACTGTTTTGCATCCTaGTGGTCTTTCTCGGGTTGC +
Preference number: 4 (lower is better)
Translates to: GLLWNPVSSCQDRLGIFFYCFAS*WSFSGC
Trigger: GCAACCCGAGAAAGACCACCAGGATGCAAAACAGTA...GAAAAAGATGCCAAGTCTGTCTTGACAACTGGAAACAGGGTTCCACAGCAGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CCA 90 bp CAAGCAGAAGTTTCTGAATGGTCCACTCACATGCTGCCATTGCGATTTGCCGATTGTGCGAAATCAACGTaGAGTCTGCCTGTGTCCTTC +
Preference number: 4 (lower is better)
Translates to: QAEVSEWSTHMLPLRFADCAKST*SLPVSF
Trigger: GAAGGACACAGGCAGACTCCACGTTGATTTCGCACA...ATCGGCAAATCGCAATGGCAGCATGTGAGTGGACCATTCAGAAACTTCTGCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CCA 90 bp CCCGAGACTGATGAATCAAAGCCTTCCGTAGCATTGATGAGAGATGCATCAGTGTGGCCGACTGGATCATaGAGTAGAAGTTATTGGCGC +
Preference number: 4 (lower is better)
Translates to: PETDESKPSVALMRDASVWPTGS*SRSYWR
Trigger: GCGCCAATAACTTCTACTCCATGATCCAGTCGGCCA...CACTGATGCATCTCTCATCAATGCTACGGAAGGCTTTGATTCATCAGTCTCGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CCA 90 bp CCTCAGGACATTCGCCCCAAACCTCCATCCTCTCTGTTTACTTTCCACCAAGCATCCATATCTTTCTCATaGGCAGCTTTCTCGTTCACC +
Preference number: 4 (lower is better)
Translates to: PQDIRPKPPSSLFTFHQASISFS*AAFSFT
Trigger: GGTGAACGAGAAAGCTGCCCATGAGAAAGATATGGA...TGCTTGGTGGAAAGTAAACAGAGAGGATGGAGGTTTGGGGCGAATGTCCTGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CCA 90 bp GTTTCTGAATGGTCCACTCACATGCTGCCATTGCGATTTGCCGATGGGCACTACTCCATATCTTTCTCATaGGCAGCTTTCTCGTTCACC +
Preference number: 4 (lower is better)
Translates to: VSEWSTHMLPLRFADGHYSISFS*AAFSFT
Trigger: GGTGAACGAGAAAGCTGCCCATGAGAAAGATATGGA...GTAGTGCCCATCGGCAAATCGCAATGGCAGCATGTGAGTGGACCATTCAGAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CCA 90 bp CCTCAGGACATTCGCCCCAAACCTCCATCCTCTCTGTTTACTTTCCACCAAGCAATCTCTTTTCCAGGCTaGCTCCAACTCCAGTCATTT +
Preference number: 4 (lower is better)
Translates to: PQDIRPKPPSSLFTFHQAISFPG*LQLQSF
Trigger: AAATGACTGGAGTTGGAGCCAGCCTGGAAAAGAGAT...TGCTTGGTGGAAAGTAAACAGAGAGGATGGAGGTTTGGGGCGAATGTCCTGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CCA 90 bp CAGGGGGAAGCCAGTTTTCAGCACGAATGGGCTGCTGTGGAACCCTGTTTCCAGAAGGTTTGTGAGAGATaGTATGTGCCACAATTTGAT +
Preference number: 4 (lower is better)
Translates to: QGEASFQHEWAAVEPCFQKVCER*YVPQFD
Trigger: ATCAAATTGTGGCACATACCATCTCTCACAAACCTT...CTGGAAACAGGGTTCCACAGCAGCCCATTCGTGCTGAAAACTGGCTTCCCCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394363.6
CDS-3UTR TCA 90 bp CCTCAGGACATTCGCCCCAAACCTCCATCCTCTCTGTTTACTTTCCACCAAGCAGTGTTCTCCAAGAATTaGTCTCAAATCAGGTTCCCT +
Preference number: 4 (lower is better)
Translates to: PQDIRPKPPSSLFTFHQAVFSKN*SQIRFP
Trigger: AGGGAACCTGATTTGAGATCAATTCTTGGAGAACAC...TGCTTGGTGGAAAGTAAACAGAGAGGATGGAGGTTTGGGGCGAATGTCCTGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370935.5
ENST00000394363.6
CDS-3UTR TCA 90 bp AAGCCACAAACCATGCTTTGTCGTTTAAAAGGTGAACCTGGTCAGGCACCTTCTTCTTGCGAATGGCAATaGTCTCTCCACACTGCTCGA +
Preference number: 4 (lower is better)
Translates to: KPQTMLCRLKGEPGQAPSSCEWQ*SLHTAR
Trigger: TCGAGCAGTGTGGAGAGATCATTGCCATTCGCAAGA...AGAAGGTGCCTGACCAGGTTCACCTTTTAAACGACAAAGCATGGTTTGTGGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR TCA 90 bp GGCTGCTGTGGAACCCTGTTTCCAGTTGTCAAGACAGACTTGGCATCTTTTTCCACAGCACTTGTGGTTTaGGGCAATTTCTCTTTAGGG +
Preference number: 4 (lower is better)
Translates to: GCCGTLFPVVKTDLASFSTALVV*GNFSLG
Trigger: CCCTAAAGAGAAATTGCCTCAAACCACAAGTGCTGT...GGAAAAAGATGCCAAGTCTGTCTTGACAACTGGAAACAGGGTTCCACAGCAGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR TCA 90 bp GGGCTGCTGTGGAACCCTGTTTCCAGTTGTCAAGACAGACTTGGCATCTTTTTCTGCAATTCAACACACTaGCAACAGAAGCAAAGGGAC +
Preference number: 4 (lower is better)
Translates to: GLLWNPVSSCQDRLGIFFCNSTH*QQKQRD
Trigger: GTCCCTTTGCTTCTGTTGTCAGTGTGTTGAATTGCA...GAAAAAGATGCCAAGTCTGTCTTGACAACTGGAAACAGGGTTCCACAGCAGCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR TCA 90 bp CCCGAGACTGATGAATCAAAGCCTTCCGTAGCATTGATGAGAGATGCATCAGTGAGTGTAAAATTAACCTaGGCTTCCTGCTGGTGCCAC +
Preference number: 4 (lower is better)
Translates to: PETDESKPSVALMRDASVSVKLT*ASCWCH
Trigger: GTGGCACCAGCAGGAAGCTCAGGTTAATTTTACACT...CACTGATGCATCTCTCATCAATGCTACGGAAGGCTTTGATTCATCAGTCTCGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR GCA 90 bp GGCTGCTGTGGAACCCTGTTTCCAGTTGTCAAGACAGACTTGGCATCTTTTTCCGGCAATTCCCAGCGGTaGCATTCCAAGATTATTCAT +
Preference number: 4 (lower is better)
Translates to: GCCGTLFPVVKTDLASFSGNSQR*HSKIIH
Trigger: ATGAATAATCTTGGAATGGCACCGCTGGGAATTGCC...GGAAAAAGATGCCAAGTCTGTCTTGACAACTGGAAACAGGGTTCCACAGCAGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR GCA 90 bp CCTCAGGACATTCGCCCCAAACCTCCATCCTCTCTGTTTACTTTCCACCAAGCACCACAAATACTGTTTTaGATCCTGGTGGTCTTTCTC +
Preference number: 4 (lower is better)
Translates to: PQDIRPKPPSSLFTFHQAPQILF*ILVVFL
Trigger: GAGAAAGACCACCAGGATGCAAAACAGTATTTGTGG...TGCTTGGTGGAAAGTAAACAGAGAGGATGGAGGTTTGGGGCGAATGTCCTGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR GCA 90 bp GTTTTCAGCACGAATGGGCTGCTGTGGAACCCTGTTTCCAGTTGTCAAGACAGATGCAGGAGTTTCAGCTaGTGTTCTTTGTTAGGGTCA +
Preference number: 4 (lower is better)
Translates to: VFSTNGLLWNPVSSCQDRCRSFS*CSLLGS
Trigger: TGACCCTAACAAAGAACAGCAGCTGAAACTCCTGCA...TCTGTCTTGACAACTGGAAACAGGGTTCCACAGCAGCCCATTCGTGCTGAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR GCA 90 bp GGCTGCTGTGGAACCCTGTTTCCAGTTGTCAAGACAGACTTGGCATCTTTTTCCTGGACTTTGAGTAGATaGTGTTGCATTCCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: GCCGTLFPVVKTDLASFSWTLSR*CCIPCR
Trigger: CCTGCAAGGAATGCAACAGCATCTACTCAAAGTCCA...GGAAAAAGATGCCAAGTCTGTCTTGACAACTGGAAACAGGGTTCCACAGCAGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR GCA 90 bp GTTTCTGAATGGTCCACTCACATGCTGCCATTGCGATTTGCCGATGGGCACTACTTAGTGCTGCTCTCATaGCTTTCACCAGTAACAACA +
Preference number: 4 (lower is better)
Translates to: VSEWSTHMLPLRFADGHYLVLLS*LSPVTT
Trigger: TGTTGTTACTGGTGAAAGGCATGAGAGCAGCACTAA...GTAGTGCCCATCGGCAAATCGCAATGGCAGCATGTGAGTGGACCATTCAGAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR GCA 90 bp GGCTGCTGTGGAACCCTGTTTCCAGTTGTCAAGACAGACTTGGCATCTTTTTCCAATATAAATCCCTTCTaGCACTGTGTGCGTGCGTGT +
Preference number: 4 (lower is better)
Translates to: GCCGTLFPVVKTDLASFSNINPF*HCVRAC
Trigger: ACACGCACGCACACAGTGGCAGAAGGGATTTATATT...GGAAAAAGATGCCAAGTCTGTCTTGACAACTGGAAACAGGGTTCCACAGCAGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR GCA 90 bp AAGCCACAAACCATGCTTTGTCGTTTAAAAGGTGAACCTGGTCAGGCACCTTCTAATGGTCCACTCACATaGTGCCATTGCGATTTGCCG +
Preference number: 4 (lower is better)
Translates to: KPQTMLCRLKGEPGQAPSNGPLT*CHCDLP
Trigger: CGGCAAATCGCAATGGCAGCATGTGAGTGGACCATT...AGAAGGTGCCTGACCAGGTTCACCTTTTAAACGACAAAGCATGGTTTGTGGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR GCA 90 bp CAGGGGGAAGCCAGTTTTCAGCACGAATGGGCTGCTGTGGAACCCTGTTTCCAGACTCAAGGGAGGGTATaGTTGCATTATTATAAATAC +
Preference number: 4 (lower is better)
Translates to: QGEASFQHEWAAVEPCFQTQGRV*LHYYKY
Trigger: GTATTTATAATAATGCAAGCATACCCTCCCTTGAGT...CTGGAAACAGGGTTCCACAGCAGCCCATTCGTGCTGAAAACTGGCTTCCCCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CCA 90 bp GGCTGCTGTGGAACCCTGTTTCCAGTTGTCAAGACAGACTTGGCATCTTTTTCCGTAGTGTCATTGCAGTaGAATCCACGTTCAGAGTTC +
Preference number: 4 (lower is better)
Translates to: GCCGTLFPVVKTDLASFSVVSLQ*NPRSEF
Trigger: GAACTCTGAACGTGGATTCCACTGCAATGACACTAC...GGAAAAAGATGCCAAGTCTGTCTTGACAACTGGAAACAGGGTTCCACAGCAGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CCA 90 bp CCACTCACATGCTGCCATTGCGATTTGCCGATGGGCACTACCAAGGTGTCTCTGCATCATTGGAGTTATTaGTGGAATTCCAGTCATCAT +
Preference number: 4 (lower is better)
Translates to: PLTCCHCDLPMGTTKVSLHHWSY*WNSSHH
Trigger: ATGATGACTGGAATTCCACCAATAACTCCAATGATG...CAGAGACACCTTGGTAGTGCCCATCGGCAAATCGCAATGGCAGCATGTGAGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CCA 90 bp GGCTGCTGTGGAACCCTGTTTCCAGTTGTCAAGACAGACTTGGCATCTTTTTCCTACTACTGGCATATCTaGAGGAATTGGTGGAGGTAC +
Preference number: 4 (lower is better)
Translates to: GCCGTLFPVVKTDLASFSYYWHI*RNWWRY
Trigger: GTACCTCCACCAATTCCTCCAGATATGCCAGTAGTA...GGAAAAAGATGCCAAGTCTGTCTTGACAACTGGAAACAGGGTTCCACAGCAGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CCA 90 bp GCCGGCAGGCTGGAAGTTCTGGCAGGAGTTGGATGTTGCAGTTTTGAGTCCAAAGATCTCTTTTACTACTaGCATATCTGGAGGAATTGG +
Preference number: 4 (lower is better)
Translates to: AGRLEVLAGVGCCSFESKDLFYY*HIWRNW
Trigger: CCAATTCCTCCAGATATGCCAGTAGTAAAAGAGATC...TTTGGACTCAAAACTGCAACATCCAACTCCTGCCAGAACTTCCAGCCTGCCGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394363.6
CDS-3UTR CCA 90 bp AAGCCACAAACCATGCTTTGTCGTTTAAAAGGTGAACCTGGTCAGGCACCTTCTTGGGAGATTTGGATTTaGAGGGAAGAGCGTGCAGCT +
Preference number: 4 (lower is better)
Translates to: KPQTMLCRLKGEPGQAPSWEIWI*REERAA
Trigger: AGCTGCACGCTCTTCCCTCCAAATCCAAATCTCCCA...AGAAGGTGCCTGACCAGGTTCACCTTTTAAACGACAAAGCATGGTTTGTGGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CCA 90 bp AAGCCACAAACCATGCTTTGTCGTTTAAAAGGTGAACCTGGTCAGGCACCTTCTTGGGGGTGGAGATGGTaGACGCAATCTTTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: KPQTMLCRLKGEPGQAPSWGWRW*TQSFFF
Trigger: GAAGAAGAAAGATTGCGTCCACCATCTCCACCCCCA...AGAAGGTGCCTGACCAGGTTCACCTTTTAAACGACAAAGCATGGTTTGTGGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CCA 90 bp AAGCCACAAACCATGCTTTGTCGTTTAAAAGGTGAACCTGGTCAGGCACCTTCTTGGCCGACTGGATCATaGAGTAGAAGTTATTGGCGC +
Preference number: 4 (lower is better)
Translates to: KPQTMLCRLKGEPGQAPSWPTGS*SRSYWR
Trigger: GCGCCAATAACTTCTACTCCATGATCCAGTCGGCCA...AGAAGGTGCCTGACCAGGTTCACCTTTTAAACGACAAAGCATGGTTTGTGGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CCA 90 bp CAAGCAGAAGTTTCTGAATGGTCCACTCACATGCTGCCATTGCGATTTGCCGATTGCTTGAAGGTATGCTaGAGTCTACCCATGAGACAC +
Preference number: 4 (lower is better)
Translates to: QAEVSEWSTHMLPLRFADCLKVC*SLPMRH
Trigger: GTGTCTCATGGGTAGACTCCAGCATACCTTCAAGCA...ATCGGCAAATCGCAATGGCAGCATGTGAGTGGACCATTCAGAAACTTCTGCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CCA 90 bp GTTTTCAGCACGAATGGGCTGCTGTGGAACCCTGTTTCCAGTTGTCAAGACAGATGGTCTACTGGGGATTaGAAAGACAATGGCAGTTAC +
Preference number: 4 (lower is better)
Translates to: VFSTNGLLWNPVSSCQDRWSTGD*KDNGSY
Trigger: GTAACTGCCATTGTCTTTCCAATCCCCAGTAGACCA...TCTGTCTTGACAACTGGAAACAGGGTTCCACAGCAGCCCATTCGTGCTGAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CCA 90 bp GGCTGCTGTGGAACCCTGTTTCCAGTTGTCAAGACAGACTTGGCATCTTTTTCCTGGTCTACTGGGGATTaGAAAGACAATGGCAGTTAC +
Preference number: 4 (lower is better)
Translates to: GCCGTLFPVVKTDLASFSWSTGD*KDNGSY
Trigger: GTAACTGCCATTGTCTTTCCAATCCCCAGTAGACCA...GGAAAAAGATGCCAAGTCTGTCTTGACAACTGGAAACAGGGTTCCACAGCAGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CCA 90 bp AGTCCAAAGGCAGTCTCGAAGCAGAATTCCCTCCTCAGGGGACTTCAGTCTTTTTGGTCTACTGGGGATTaGAAAGACAATGGCAGTTAC +
Preference number: 4 (lower is better)
Translates to: SPKAVSKQNSLLRGLQSFWSTGD*KDNGSY
Trigger: GTAACTGCCATTGTCTTTCCAATCCCCAGTAGACCA...AAAAGACTGAAGTCCCCTGAGGAGGGAATTCTGCTTCGAGACTGCCTTTGGACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394363.6
CDS-3UTR CCA 90 bp CCACTCACATGCTGCCATTGCGATTTGCCGATGGGCACTACCAAGGTGTCTCTGACATGCCAGTCATACTaGATACTTGCTTTCTGTAAA +
Preference number: 4 (lower is better)
Translates to: PLTCCHCDLPMGTTKVSLTCQSY*ILAFCK
Trigger: TTTACAGAAAGCAAGTATCCAGTATGACTGGCATGT...CAGAGACACCTTGGTAGTGCCCATCGGCAAATCGCAATGGCAGCATGTGAGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CCA 90 bp CAAGCAGAAGTTTCTGAATGGTCCACTCACATGCTGCCATTGCGATTTGCCGATGCAGAAGTTTCTGAATaGTCCACTCACATGCTGCCA +
Preference number: 4 (lower is better)
Translates to: QAEVSEWSTHMLPLRFADAEVSE*STHMLP
Trigger: TGGCAGCATGTGAGTGGACCATTCAGAAACTTCTGC...ATCGGCAAATCGCAATGGCAGCATGTGAGTGGACCATTCAGAAACTTCTGCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR TCA 90 bp GCACGAATGGGCTGCTGTGGAACCCTGTTTCCAGTTGTCAAGACAGACTTGGCAACTATCTGCTCAAATTaGATGAGAATTCCAGAAAGG +
Preference number: 4 (lower is better)
Translates to: ARMGCCGTLFPVVKTDLATICSN*MRIPER
Trigger: CCTTTCTGGAATTCTCATTCAATTTGAGCAGATAGT...TGCCAAGTCTGTCTTGACAACTGGAAACAGGGTTCCACAGCAGCCCATTCGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR TCA 90 bp ACATGCTGCCATTGCGATTTGCCGATGGGCACTACCAAGGTGTCTCTGGCAATTTCTTTTATCTTCAATTaGGACTCAAGGGAGGGTATG +
Preference number: 4 (lower is better)
Translates to: TCCHCDLPMGTTKVSLAISFIFN*DSREGM
Trigger: CATACCCTCCCTTGAGTCTCAATTGAAGATAAAAGA...AATTGCCAGAGACACCTTGGTAGTGCCCATCGGCAAATCGCAATGGCAGCATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR TCA 90 bp TGCCTCAGGACATTCGCCCCAAACCTCCATCCTCTCTGTTTACTTTCCACCAAGTCTTTTATCTTCAATTaGGACTCAAGGGAGGGTATG +
Preference number: 4 (lower is better)
Translates to: CLRTFAPNLHPLCLLSTKSFIFN*DSREGM
Trigger: CATACCCTCCCTTGAGTCTCAATTGAAGATAAAAGA...CTTGGTGGAAAGTAAACAGAGAGGATGGAGGTTTGGGGCGAATGTCCTGAGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR GCA 90 bp ACCACCACCACACACAATAAAGACCATCTCTGCCTCAGGACATTCGCCCCAAACACTTTGCCTTGTTCTTaGTTGAGCAGTTCTACTTCA +
Preference number: 4 (lower is better)
Translates to: TTTTHNKDHLCLRTFAPNTLPCS*LSSSTS
Trigger: TGAAGTAGAACTGCTCAAGCAAGAACAAGGCAAAGT...GTTTGGGGCGAATGTCCTGAGGCAGAGATGGTCTTTATTGTGTGTGGTGGTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR GCA 90 bp CAAGCAGAAGTTTCTGAATGGTCCACTCACATGCTGCCATTGCGATTTGCCGATTGGACTTTGAGTAGATaGTGTTGCATTCCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: QAEVSEWSTHMLPLRFADWTLSR*CCIPCR
Trigger: CCTGCAAGGAATGCAACAGCATCTACTCAAAGTCCA...ATCGGCAAATCGCAATGGCAGCATGTGAGTGGACCATTCAGAAACTTCTGCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR GCA 90 bp ACCACCACCACACACAATAAAGACCATCTCTGCCTCAGGACATTCGCCCCAAACGATGTATTCAATGCTTaGTCCAAATGGGTGAACATG +
Preference number: 4 (lower is better)
Translates to: TTTTHNKDHLCLRTFAPNDVFNA*SKWVNM
Trigger: CATGTTCACCCATTTGGAGCAAGCATTGAATACATC...GTTTGGGGCGAATGTCCTGAGGCAGAGATGGTCTTTATTGTGTGTGGTGGTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR GCA 90 bp CCTCAGGACATTCGCCCCAAACCTCCATCCTCTCTGTTTACTTTCCACCAAGCAGATGTATTCAATGCTTaGTCCAAATGGGTGAACATG +
Preference number: 4 (lower is better)
Translates to: PQDIRPKPPSSLFTFHQADVFNA*SKWVNM
Trigger: CATGTTCACCCATTTGGAGCAAGCATTGAATACATC...TGCTTGGTGGAAAGTAAACAGAGAGGATGGAGGTTTGGGGCGAATGTCCTGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR GCA 90 bp GCACGAATGGGCTGCTGTGGAACCCTGTTTCCAGTTGTCAAGACAGACTTGGCAAACAGATGTATTCAATaGTTGCTCCAAATGGGTGAA +
Preference number: 4 (lower is better)
Translates to: ARMGCCGTLFPVVKTDLANRCIQ*LLQMGE
Trigger: TTCACCCATTTGGAGCAAGCATTGAATACATCTGTT...TGCCAAGTCTGTCTTGACAACTGGAAACAGGGTTCCACAGCAGCCCATTCGTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR GCA 90 bp GTTTTCAGCACGAATGGGCTGCTGTGGAACCCTGTTTCCAGTTGTCAAGACAGAACTCCACATCGCTGGTaGAGATCTTATTATCAAGAC +
Preference number: 4 (lower is better)
Translates to: VFSTNGLLWNPVSSCQDRTPHRW*RSYYQD
Trigger: GTCTTGATAATAAGATCTGCACCAGCGATGTGGAGT...TCTGTCTTGACAACTGGAAACAGGGTTCCACAGCAGCCCATTCGTGCTGAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR GCA 90 bp AAGCCACAAACCATGCTTTGTCGTTTAAAAGGTGAACCTGGTCAGGCACCTTCTTCCTGCTTGAAGGTATaGTGGAGTCTACCCATGAGA +
Preference number: 4 (lower is better)
Translates to: KPQTMLCRLKGEPGQAPSSCLKV*WSLPMR
Trigger: TCTCATGGGTAGACTCCAGCATACCTTCAAGCAGGA...AGAAGGTGCCTGACCAGGTTCACCTTTTAAACGACAAAGCATGGTTTGTGGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR GCA 90 bp CCCGAGACTGATGAATCAAAGCCTTCCGTAGCATTGATGAGAGATGCATCAGTGAATATAAATCCCTTCTaGCACTGTGTGCGTGCGTGT +
Preference number: 4 (lower is better)
Translates to: PETDESKPSVALMRDASVNINPF*HCVRAC
Trigger: ACACGCACGCACACAGTGGCAGAAGGGATTTATATT...CACTGATGCATCTCTCATCAATGCTACGGAAGGCTTTGATTCATCAGTCTCGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR GCA 90 bp ACATGCTGCCATTGCGATTTGCCGATGGGCACTACCAAGGTGTCTCTGGCAATTACTCTCCATTGGCTTTaGTTGCTCAGTACATTCTTT +
Preference number: 4 (lower is better)
Translates to: TCCHCDLPMGTTKVSLAITLHWL*LLSTFF
Trigger: AAAGAATGTACTGAGCAAGCAAAGCCAATGGAGAGT...AATTGCCAGAGACACCTTGGTAGTGCCCATCGGCAAATCGCAATGGCAGCATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CCA 90 bp AAGCCACAAACCATGCTTTGTCGTTTAAAAGGTGAACCTGGTCAGGCACCTTCTTACTGTTTTGCATCCTaGTGGTCTTTCTCGGGTTGC +
Preference number: 4 (lower is better)
Translates to: KPQTMLCRLKGEPGQAPSYCFAS*WSFSGC
Trigger: GCAACCCGAGAAAGACCACCAGGATGCAAAACAGTA...AGAAGGTGCCTGACCAGGTTCACCTTTTAAACGACAAAGCATGGTTTGTGGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CCA 90 bp GGGCTGCTGTGGAACCCTGTTTCCAGTTGTCAAGACAGACTTGGCATCTTTTTCGACACTCCACATCGCTaGTGCAGATCTTATTATCAA +
Preference number: 4 (lower is better)
Translates to: GLLWNPVSSCQDRLGIFFDTPHR*CRSYYQ
Trigger: TTGATAATAAGATCTGCACCAGCGATGTGGAGTGTC...GAAAAAGATGCCAAGTCTGTCTTGACAACTGGAAACAGGGTTCCACAGCAGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CCA 90 bp CCCGAGACTGATGAATCAAAGCCTTCCGTAGCATTGATGAGAGATGCATCAGTGATCTCTTTTCCAGGCTaGCTCCAACTCCAGTCATTT +
Preference number: 4 (lower is better)
Translates to: PETDESKPSVALMRDASVISFPG*LQLQSF
Trigger: AAATGACTGGAGTTGGAGCCAGCCTGGAAAAGAGAT...CACTGATGCATCTCTCATCAATGCTACGGAAGGCTTTGATTCATCAGTCTCGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CCA 90 bp GTTTTCAGCACGAATGGGCTGCTGTGGAACCCTGTTTCCAGTTGTCAAGACAGAGGATTGGAAAGACAATaGCAGTTACACAGAGGACTT +
Preference number: 4 (lower is better)
Translates to: VFSTNGLLWNPVSSCQDRGLERQ*QLHRGL
Trigger: AAGTCCTCTGTGTAACTGCCATTGTCTTTCCAATCC...TCTGTCTTGACAACTGGAAACAGGGTTCCACAGCAGCCCATTCGTGCTGAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
3UTR CAA 72 bp TTGACAGAAAGGGGAGGAAGTTACAGCACTTGTGGTTaGAGGCAATTTCTCTTTAGGGCCTGTAGTTCGAGG +
Preference number: 4 (lower is better)
Translates to: LTERGGSYSTCG*RQFLFRACSSR
Trigger: CCTCGAACTACAGGCCCTAAAGAGAAATTGCCTCAAACCACAAGTGCTGTAACTTCCTCCCCTTTCTGTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338144.7
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR TCA 90 bp ACCACCACCACACACAATAAAGACCATCTCTGCCTCAGGACATTCGCCCCAAACAGCTTTTACAGTGTATaGTCTCTTTTACTACTGGCA +
Preference number: 4 (lower is better)
Translates to: TTTTHNKDHLCLRTFAPNSFYSV*SLLLLA
Trigger: TGCCAGTAGTAAAAGAGATCATACACTGTAAAAGCT...GTTTGGGGCGAATGTCCTGAGGCAGAGATGGTCTTTATTGTGTGTGGTGGTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR TCA 90 bp GGGCTGCTGTGGAACCCTGTTTCCAGTTGTCAAGACAGACTTGGCATCTTTTTCGGTCTGTACAGCTTCTaGGAATTTGGAATCATCTTT +
Preference number: 4 (lower is better)
Translates to: GLLWNPVSSCQDRLGIFFGLYSF*EFGIIF
Trigger: AAAGATGATTCCAAATTCTCAGAAGCTGTACAGACC...GAAAAAGATGCCAAGTCTGTCTTGACAACTGGAAACAGGGTTCCACAGCAGCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR TCA 90 bp ATAGTATTTACAGCAGTACTCGGTTTGCAATTCAACACACTGACAACAGAAGCAGTTTGCACCACACGCTaGTGTTCTTCCGCTGGGCTT +
Preference number: 4 (lower is better)
Translates to: IVFTAVLGLQFNTLTTEAVCTTR*CSSAGL
Trigger: AAGCCCAGCGGAAGAACATCAGCGTGTGGTGCAAAC...TGCTTCTGTTGTCAGTGTGTTGAATTGCAAACCGAGTACTGCTGTAAATACTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR TCA 90 bp AAGCCACAAACCATGCTTTGTCGTTTAAAAGGTGAACCTGGTCAGGCACCTTCTTGCAATTCAACACACTaGCAACAGAAGCAAAGGGAC +
Preference number: 4 (lower is better)
Translates to: KPQTMLCRLKGEPGQAPSCNSTH*QQKQRD
Trigger: GTCCCTTTGCTTCTGTTGTCAGTGTGTTGAATTGCA...AGAAGGTGCCTGACCAGGTTCACCTTTTAAACGACAAAGCATGGTTTGTGGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR GCA 90 bp ACCACCACCACACACAATAAAGACCATCTCTGCCTCAGGACATTCGCCCCAAACCATCTAAAATCTCTTTaGATTGTGTGGTCCTCAACT +
Preference number: 4 (lower is better)
Translates to: TTTTHNKDHLCLRTFAPNHLKSL*IVWSST
Trigger: AGTTGAGGACCACACAATGCAAAGAGATTTTAGATG...GTTTGGGGCGAATGTCCTGAGGCAGAGATGGTCTTTATTGTGTGTGGTGGTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370927.5
CDS-3UTR GCA 90 bp AAGCCACAAACCATGCTTTGTCGTTTAAAAGGTGAACCTGGTCAGGCACCTTCTTCCAAGATTATTCATTaGTGTGGCCCATGCAGTTGG +
Preference number: 4 (lower is better)
Translates to: KPQTMLCRLKGEPGQAPSSKIIH*CGPCSW
Trigger: CCAACTGCATGGGCCACAGCAATGAATAATCTTGGA...AGAAGGTGCCTGACCAGGTTCACCTTTTAAACGACAAAGCATGGTTTGTGGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR GCA 90 bp ATAGTATTTACAGCAGTACTCGGTTTGCAATTCAACACACTGACAACAGAAGCATGGTCCCATGCCTTCTaGTTGGAGGCGGAATGGTAC +
Preference number: 4 (lower is better)
Translates to: IVFTAVLGLQFNTLTTEAWSHAF*LEAEWY
Trigger: GTACCATTCCGCCTCCAAGCAGAAGGCATGGGACCA...TGCTTCTGTTGTCAGTGTGTTGAATTGCAAACCGAGTACTGCTGTAAATACTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR GCA 90 bp ATAGTATTTACAGCAGTACTCGGTTTGCAATTCAACACACTGACAACAGAAGCATGTGAAGTGGTCCCATaGCTTCTGCTTGGAGGCGGA +
Preference number: 4 (lower is better)
Translates to: IVFTAVLGLQFNTLTTEACEVVP*LLLGGG
Trigger: TCCGCCTCCAAGCAGAAGGCATGGGACCACTTCACA...TGCTTCTGTTGTCAGTGTGTTGAATTGCAAACCGAGTACTGCTGTAAATACTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR GCA 90 bp GGGCTGCTGTGGAACCCTGTTTCCAGTTGTCAAGACAGACTTGGCATCTTTTTCGATGTATTCAATGCTTaGTCCAAATGGGTGAACATG +
Preference number: 4 (lower is better)
Translates to: GLLWNPVSSCQDRLGIFFDVFNA*SKWVNM
Trigger: CATGTTCACCCATTTGGAGCAAGCATTGAATACATC...GAAAAAGATGCCAAGTCTGTCTTGACAACTGGAAACAGGGTTCCACAGCAGCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR GCA 90 bp ACCACCACCACACACAATAAAGACCATCTCTGCCTCAGGACATTCGCCCCAAACAACAGATGTATTCAATaGTTGCTCCAAATGGGTGAA +
Preference number: 4 (lower is better)
Translates to: TTTTHNKDHLCLRTFAPNNRCIQ*LLQMGE
Trigger: TTCACCCATTTGGAGCAAGCATTGAATACATCTGTT...GTTTGGGGCGAATGTCCTGAGGCAGAGATGGTCTTTATTGTGTGTGGTGGTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR GCA 90 bp TGCCTCAGGACATTCGCCCCAAACCTCCATCCTCTCTGTTTACTTTCCACCAAGAACAGATGTATTCAATaGTTGCTCCAAATGGGTGAA +
Preference number: 4 (lower is better)
Translates to: CLRTFAPNLHPLCLLSTKNRCIQ*LLQMGE
Trigger: TTCACCCATTTGGAGCAAGCATTGAATACATCTGTT...CTTGGTGGAAAGTAAACAGAGAGGATGGAGGTTTGGGGCGAATGTCCTGAGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR GCA 90 bp AAGCCACAAACCATGCTTTGTCGTTTAAAAGGTGAACCTGGTCAGGCACCTTCTAATATAAATCCCTTCTaGCACTGTGTGCGTGCGTGT +
Preference number: 4 (lower is better)
Translates to: KPQTMLCRLKGEPGQAPSNINPF*HCVRAC
Trigger: ACACGCACGCACACAGTGGCAGAAGGGATTTATATT...AGAAGGTGCCTGACCAGGTTCACCTTTTAAACGACAAAGCATGGTTTGTGGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR GCA 90 bp ACATGCTGCCATTGCGATTTGCCGATGGGCACTACCAAGGTGTCTCTGGCAATTTCCATTGGCTTTGCTTaGTCAGTACATTCTTTTATC +
Preference number: 4 (lower is better)
Translates to: TCCHCDLPMGTTKVSLAISIGFA*SVHSFI
Trigger: GATAAAAGAATGTACTGAGCAAGCAAAGCCAATGGA...AATTGCCAGAGACACCTTGGTAGTGCCCATCGGCAAATCGCAATGGCAGCATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR GCA 90 bp TATCTTCAATTGAGACTCAAGGGAGGGTATGCTTGCATTATTATAAATACCACAGGTGCCACAGCAGGGTaGTTCAGGGGGAAGCCAGTT +
Preference number: 4 (lower is better)
Translates to: YLQLRLKGGYACIIINTTGATAG*FRGKPV
Trigger: AACTGGCTTCCCCCTGAAGCACCCTGCTGTGGCACC...TGTGGTATTTATAATAATGCAAGCATACCCTCCCTTGAGTCTCAATTGAAGATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CCA 90 bp CCCGAGACTGATGAATCAAAGCCTTCCGTAGCATTGATGAGAGATGCATCAGTGCAAACCAGGCATCATTaGAGTTATTGGTGGAATTCC +
Preference number: 4 (lower is better)
Translates to: PETDESKPSVALMRDASVQTRHH*SYWWNS
Trigger: GGAATTCCACCAATAACTCCAATGATGCCTGGTTTG...CACTGATGCATCTCTCATCAATGCTACGGAAGGCTTTGATTCATCAGTCTCGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CCA 90 bp AATATTAATATAAATCCCTTCTGCCACTGTGTGCGTGCGTGTGTGTGTTTGTGCTGTTTTGCATCCTGGTaGTCTTTCTCGGGTTGCAGG +
Preference number: 4 (lower is better)
Translates to: NININPFCHCVRACVCLCCFASW*SFSGCR
Trigger: CCTGCAACCCGAGAAAGACCACCAGGATGCAAAACA...GCACAAACACACACACGCACGCACACAGTGGCAGAAGGGATTTATATTAATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CCA 90 bp AATATTAATATAAATCCCTTCTGCCACTGTGTGCGTGCGTGTGTGTGTTTGTGCCTGATGTTCTTCCGCTaGGCTTTTGTGAAGTGGTCC +
Preference number: 4 (lower is better)
Translates to: NININPFCHCVRACVCLCLMFFR*AFVKWS
Trigger: GGACCACTTCACAAAAGCCCAGCGGAAGAACATCAG...GCACAAACACACACACGCACGCACACAGTGGCAGAAGGGATTTATATTAATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CCA 90 bp GCACGAATGGGCTGCTGTGGAACCCTGTTTCCAGTTGTCAAGACAGACTTGGCATTTTTGTATTCCTCTTaGACTTTGAGTAGATGCTGT +
Preference number: 4 (lower is better)
Translates to: ARMGCCGTLFPVVKTDLAFLYSS*TLSRCC
Trigger: ACAGCATCTACTCAAAGTCCAAGAGGAATACAAAAA...TGCCAAGTCTGTCTTGACAACTGGAAACAGGGTTCCACAGCAGCCCATTCGTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CCA 90 bp AAGCCACAAACCATGCTTTGTCGTTTAAAAGGTGAACCTGGTCAGGCACCTTCTATCTCTTTTCCAGGCTaGCTCCAACTCCAGTCATTT +
Preference number: 4 (lower is better)
Translates to: KPQTMLCRLKGEPGQAPSISFPG*LQLQSF
Trigger: AAATGACTGGAGTTGGAGCCAGCCTGGAAAAGAGAT...AGAAGGTGCCTGACCAGGTTCACCTTTTAAACGACAAAGCATGGTTTGTGGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CCA 90 bp ACCACCACCACACACAATAAAGACCATCTCTGCCTCAGGACATTCGCCCCAAACTTGTCAAGACAGACTTaGCATCTTTTTCCAACATTC +
Preference number: 4 (lower is better)
Translates to: TTTTHNKDHLCLRTFAPNLSRQT*HLFPTF
Trigger: GAATGTTGGAAAAAGATGCCAAGTCTGTCTTGACAA...GTTTGGGGCGAATGTCCTGAGGCAGAGATGGTCTTTATTGTGTGTGGTGGTGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CCA 90 bp AATATTAATATAAATCCCTTCTGCCACTGTGTGCGTGCGTGTGTGTGTTTGTGCACGAATGGGCTGCTGTaGAACCCTGTTTCCAGTTGT +
Preference number: 4 (lower is better)
Translates to: NININPFCHCVRACVCLCTNGLL*NPVSSC
Trigger: ACAACTGGAAACAGGGTTCCACAGCAGCCCATTCGT...GCACAAACACACACACGCACGCACACAGTGGCAGAAGGGATTTATATTAATATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CCA 90 bp GCCGGCAGGCTGGAAGTTCTGGCAGGAGTTGGATGTTGCAGTTTTGAGTCCAAATATATTCAAGCAAACTaGGAGGAGTATACCTATACT +
Preference number: 4 (lower is better)
Translates to: AGRLEVLAGVGCCSFESKYIQAN*EEYTYT
Trigger: AGTATAGGTATACTCCTCCCAGTTTGCTTGAATATA...TTTGGACTCAAAACTGCAACATCCAACTCCTGCCAGAACTTCCAGCCTGCCGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394363.6
CDS-3UTR TCA 90 bp GGCTGCTGTGGAACCCTGTTTCCAGTTGTCAAGACAGACTTGGCATCTTTTTCCACTATCTGCTCAAATTaGATGAGAATTCCAGAAAGG +
Preference number: 4 (lower is better)
Translates to: GCCGTLFPVVKTDLASFSTICSN*MRIPER
Trigger: CCTTTCTGGAATTCTCATTCAATTTGAGCAGATAGT...GGAAAAAGATGCCAAGTCTGTCTTGACAACTGGAAACAGGGTTCCACAGCAGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR TCA 90 bp CCCGAGACTGATGAATCAAAGCCTTCCGTAGCATTGATGAGAGATGCATCAGTGTTAAAGACAACCAATTaGCAGAAAGGGGAGGAAGTT +
Preference number: 4 (lower is better)
Translates to: PETDESKPSVALMRDASVLKTTN*QKGEEV
Trigger: AACTTCCTCCCCTTTCTGTCAATTGGTTGTCTTTAA...CACTGATGCATCTCTCATCAATGCTACGGAAGGCTTTGATTCATCAGTCTCGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR TCA 90 bp AATATTAATATAAATCCCTTCTGCCACTGTGTGCGTGCGTGTGTGTGTTTGTGCTTGTCGTTTAAAAGGTaGACCTGGTCAGGCACCTTC +
Preference number: 4 (lower is better)
Translates to: NININPFCHCVRACVCLCLSFKR*TWSGTF
Trigger: GAAGGTGCCTGACCAGGTTCACCTTTTAAACGACAA...GCACAAACACACACACGCACGCACACAGTGGCAGAAGGGATTTATATTAATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR TCA 90 bp AATATTAATATAAATCCCTTCTGCCACTGTGTGCGTGCGTGTGTGTGTTTGTGCCCAAGCAGAAGTTTCTaGATGGTCCACTCACATGCT +
Preference number: 4 (lower is better)
Translates to: NININPFCHCVRACVCLCPSRSF*MVHSHA
Trigger: AGCATGTGAGTGGACCATTCAGAAACTTCTGCTTGG...GCACAAACACACACACGCACGCACACAGTGGCAGAAGGGATTTATATTAATATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR GCA 90 bp AAGCCACAAACCATGCTTTGTCGTTTAAAAGGTGAACCTGGTCAGGCACCTTCTCCACAAATACTGTTTTaGATCCTGGTGGTCTTTCTC +
Preference number: 4 (lower is better)
Translates to: KPQTMLCRLKGEPGQAPSPQILF*ILVVFL
Trigger: GAGAAAGACCACCAGGATGCAAAACAGTATTTGTGG...AGAAGGTGCCTGACCAGGTTCACCTTTTAAACGACAAAGCATGGTTTGTGGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR GCA 90 bp ACCACCACCACACACAATAAAGACCATCTCTGCCTCAGGACATTCGCCCCAAACTTTCAGCAACAATGCTaGATTCATGATCTGAATAGT +
Preference number: 4 (lower is better)
Translates to: TTTTHNKDHLCLRTFAPNFQQQC*IHDLNS
Trigger: ACTATTCAGATCATGAATGCAGCATTGTTGCTGAAA...GTTTGGGGCGAATGTCCTGAGGCAGAGATGGTCTTTATTGTGTGTGGTGGTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR GCA 90 bp AATATTAATATAAATCCCTTCTGCCACTGTGTGCGTGCGTGTGTGTGTTTGTGCTCCTGCTTGAAGGTATaGTGGAGTCTACCCATGAGA +
Preference number: 4 (lower is better)
Translates to: NININPFCHCVRACVCLCSCLKV*WSLPMR
Trigger: TCTCATGGGTAGACTCCAGCATACCTTCAAGCAGGA...GCACAAACACACACACGCACGCACACAGTGGCAGAAGGGATTTATATTAATATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR GCA 90 bp ACATGCTGCCATTGCGATTTGCCGATGGGCACTACCAAGGTGTCTCTGGCAATTAAGGGAGGGTATGCTTaGATTATTATAAATACCACA +
Preference number: 4 (lower is better)
Translates to: TCCHCDLPMGTTKVSLAIKGGYA*IIINTT
Trigger: TGTGGTATTTATAATAATGCAAGCATACCCTCCCTT...AATTGCCAGAGACACCTTGGTAGTGCCCATCGGCAAATCGCAATGGCAGCATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR GCA 90 bp ACCACCACCACACACAATAAAGACCATCTCTGCCTCAGGACATTCGCCCCAAACACTCAAGGGAGGGTATaGTTGCATTATTATAAATAC +
Preference number: 4 (lower is better)
Translates to: TTTTHNKDHLCLRTFAPNTQGRV*LHYYKY
Trigger: GTATTTATAATAATGCAAGCATACCCTCCCTTGAGT...GTTTGGGGCGAATGTCCTGAGGCAGAGATGGTCTTTATTGTGTGTGGTGGTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR GCA 90 bp GGGCTGCTGTGGAACCCTGTTTCCAGTTGTCAAGACAGACTTGGCATCTTTTTCTCCATTGGCTTTGCTTaGTCAGTACATTCTTTTATC +
Preference number: 4 (lower is better)
Translates to: GLLWNPVSSCQDRLGIFFSIGFA*SVHSFI
Trigger: GATAAAAGAATGTACTGAGCAAGCAAAGCCAATGGA...GAAAAAGATGCCAAGTCTGTCTTGACAACTGGAAACAGGGTTCCACAGCAGCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR GCA 90 bp CCCGAGACTGATGAATCAAAGCCTTCCGTAGCATTGATGAGAGATGCATCAGTGACTCTCCATTGGCTTTaGTTGCTCAGTACATTCTTT +
Preference number: 4 (lower is better)
Translates to: PETDESKPSVALMRDASVTLHWL*LLSTFF
Trigger: AAAGAATGTACTGAGCAAGCAAAGCCAATGGAGAGT...CACTGATGCATCTCTCATCAATGCTACGGAAGGCTTTGATTCATCAGTCTCGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CCA 90 bp AAGCCACAAACCATGCTTTGTCGTTTAAAAGGTGAACCTGGTCAGGCACCTTCTCATATCTGGAGGAATTaGTGGAGGTACTATTCCCAA +
Preference number: 4 (lower is better)
Translates to: KPQTMLCRLKGEPGQAPSHIWRN*WRYYSQ
Trigger: TTGGGAATAGTACCTCCACCAATTCCTCCAGATATG...AGAAGGTGCCTGACCAGGTTCACCTTTTAAACGACAAAGCATGGTTTGTGGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CCA 90 bp CCCGAGACTGATGAATCAAAGCCTTCCGTAGCATTGATGAGAGATGCATCAGTGGATCTCTTTTACTACTaGCATATCTGGAGGAATTGG +
Preference number: 4 (lower is better)
Translates to: PETDESKPSVALMRDASVDLFYY*HIWRNW
Trigger: CCAATTCCTCCAGATATGCCAGTAGTAAAAGAGATC...CACTGATGCATCTCTCATCAATGCTACGGAAGGCTTTGATTCATCAGTCTCGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CCA 90 bp TATCTTCAATTGAGACTCAAGGGAGGGTATGCTTGCATTATTATAAATACCACAGTGGACCACTGGGGGTaGAGATGGTGGACGCAATCT +
Preference number: 4 (lower is better)
Translates to: YLQLRLKGGYACIIINTTVDHWG*RWWTQS
Trigger: AGATTGCGTCCACCATCTCCACCCCCAGTGGTCCAC...TGTGGTATTTATAATAATGCAAGCATACCCTCCCTTGAGTCTCAATTGAAGATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CCA 90 bp TATCTTCAATTGAGACTCAAGGGAGGGTATGCTTGCATTATTATAAATACCACAGGCGGACATGGCTGTTaGCCGACTGGATCATGGAGT +
Preference number: 4 (lower is better)
Translates to: YLQLRLKGGYACIIINTTGGHGC*PTGSWS
Trigger: ACTCCATGATCCAGTCGGCCAACAGCCATGTCCGCC...TGTGGTATTTATAATAATGCAAGCATACCCTCCCTTGAGTCTCAATTGAAGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CCA 90 bp AGAGATCTATTTATTTTAAGGAATTGGCTCTTGCAATTATGGGGGCTGGCAAGTTGCTTGGAGGCGGAATaGTACACAGCCACTATCTGC +
Preference number: 4 (lower is better)
Translates to: RDLFILRNWLLQLWGLASCLEAE*YTATIC
Trigger: GCAGATAGTGGCTGTGTACCATTCCGCCTCCAAGCA...ACTTGCCAGCCCCCATAATTGCAAGAGCCAATTCCTTAAAATAAATAGATCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394363.6
CDS-3UTR CCA 90 bp CCTCAGGACATTCGCCCCAAACCTCCATCCTCTCTGTTTACTTTCCACCAAGCATTTTTGTATTCCTCTTaGACTTTGAGTAGATGCTGT +
Preference number: 4 (lower is better)
Translates to: PQDIRPKPPSSLFTFHQAFLYSS*TLSRCC
Trigger: ACAGCATCTACTCAAAGTCCAAGAGGAATACAAAAA...TGCTTGGTGGAAAGTAAACAGAGAGGATGGAGGTTTGGGGCGAATGTCCTGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CCA 90 bp GGCTGCTGTGGAACCCTGTTTCCAGTTGTCAAGACAGACTTGGCATCTTTTTCCTTGTCAAGACAGACTTaGCATCTTTTTCCAACATTC +
Preference number: 4 (lower is better)
Translates to: GCCGTLFPVVKTDLASFSLSRQT*HLFPTF
Trigger: GAATGTTGGAAAAAGATGCCAAGTCTGTCTTGACAA...GGAAAAAGATGCCAAGTCTGTCTTGACAACTGGAAACAGGGTTCCACAGCAGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CCA 90 bp GGGCTGCTGTGGAACCCTGTTTCCAGTTGTCAAGACAGACTTGGCATCTTTTTCTTGTCAAGACAGACTTaGCATCTTTTTCCAACATTC +
Preference number: 4 (lower is better)
Translates to: GLLWNPVSSCQDRLGIFFLSRQT*HLFPTF
Trigger: GAATGTTGGAAAAAGATGCCAAGTCTGTCTTGACAA...GAAAAAGATGCCAAGTCTGTCTTGACAACTGGAAACAGGGTTCCACAGCAGCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CCA 90 bp ATAGTATTTACAGCAGTACTCGGTTTGCAATTCAACACACTGACAACAGAAGCAGGTGAACGTGTGCCATaGTGGTTTTGCTGCACCTCA +
Preference number: 4 (lower is better)
Translates to: IVFTAVLGLQFNTLTTEAGERVP*WFCCTS
Trigger: TGAGGTGCAGCAAAACCACCATGGCACACGTTCACC...TGCTTCTGTTGTCAGTGTGTTGAATTGCAAACCGAGTACTGCTGTAAATACTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
3UTR CAA 72 bp TGCTGTGGAACCCTGTTTCCAGTTGTCAAGACAGACTaGGCATCTTTTTCCAACATTCTAGTAACCCAAAGG +
Preference number: 4 (lower is better)
Translates to: CCGTLFPVVKTD*ASFSNILVTQR
Trigger: CCTTTGGGTTACTAGAATGTTGGAAAAAGATGCCAAGTCTGTCTTGACAACTGGAAACAGGGTTCCACAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338144.7
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR TCA 90 bp TATCTTCAATTGAGACTCAAGGGAGGGTATGCTTGCATTATTATAAATACCACAGTTTGCACCACACGCTaGTGTTCTTCCGCTGGGCTT +
Preference number: 4 (lower is better)
Translates to: YLQLRLKGGYACIIINTTVCTTR*CSSAGL
Trigger: AAGCCCAGCGGAAGAACATCAGCGTGTGGTGCAAAC...TGTGGTATTTATAATAATGCAAGCATACCCTCCCTTGAGTCTCAATTGAAGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR TCA 90 bp AATATTAATATAAATCCCTTCTGCCACTGTGTGCGTGCGTGTGTGTGTTTGTGCTGCCTTGTTCTTGCTTaGGCAGTTCTACTTCATTCC +
Preference number: 4 (lower is better)
Translates to: NININPFCHCVRACVCLCCLVLA*AVLLHS
Trigger: GGAATGAAGTAGAACTGCTCAAGCAAGAACAAGGCA...GCACAAACACACACACGCACGCACACAGTGGCAGAAGGGATTTATATTAATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR GCA 90 bp AATATTAATATAAATCCCTTCTGCCACTGTGTGCGTGCGTGTGTGTGTTTGTGCGGCAATTCCCAGCGGTaGCATTCCAAGATTATTCAT +
Preference number: 4 (lower is better)
Translates to: NININPFCHCVRACVCLCGNSQR*HSKIIH
Trigger: ATGAATAATCTTGGAATGGCACCGCTGGGAATTGCC...GCACAAACACACACACGCACGCACACAGTGGCAGAAGGGATTTATATTAATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR GCA 90 bp AAGCCACAAACCATGCTTTGTCGTTTAAAAGGTGAACCTGGTCAGGCACCTTCTACTTTGCCTTGTTCTTaGTTGAGCAGTTCTACTTCA +
Preference number: 4 (lower is better)
Translates to: KPQTMLCRLKGEPGQAPSTLPCS*LSSSTS
Trigger: TGAAGTAGAACTGCTCAAGCAAGAACAAGGCAAAGT...AGAAGGTGCCTGACCAGGTTCACCTTTTAAACGACAAAGCATGGTTTGTGGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR GCA 90 bp ATAGTATTTACAGCAGTACTCGGTTTGCAATTCAACACACTGACAACAGAAGCATGCTGTTGCATTCCTTaGAGGGCTTGTTGCAGGAGT +
Preference number: 4 (lower is better)
Translates to: IVFTAVLGLQFNTLTTEACCCIP*RACCRS
Trigger: ACTCCTGCAACAAGCCCTGCAAGGAATGCAACAGCA...TGCTTCTGTTGTCAGTGTGTTGAATTGCAAACCGAGTACTGCTGTAAATACTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR GCA 90 bp AGTCCAAAGGCAGTCTCGAAGCAGAATTCCCTCCTCAGGGGACTTCAGTCTTTTAAGGGAGGGTATGCTTaGATTATTATAAATACCACA +
Preference number: 4 (lower is better)
Translates to: SPKAVSKQNSLLRGLQSFKGGYA*IIINTT
Trigger: TGTGGTATTTATAATAATGCAAGCATACCCTCCCTT...AAAAGACTGAAGTCCCCTGAGGAGGGAATTCTGCTTCGAGACTGCCTTTGGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394363.6
CDS-3UTR GCA 90 bp AAGCCACAAACCATGCTTTGTCGTTTAAAAGGTGAACCTGGTCAGGCACCTTCTACTCTCCATTGGCTTTaGTTGCTCAGTACATTCTTT +
Preference number: 4 (lower is better)
Translates to: KPQTMLCRLKGEPGQAPSTLHWL*LLSTFF
Trigger: AAAGAATGTACTGAGCAAGCAAAGCCAATGGAGAGT...AGAAGGTGCCTGACCAGGTTCACCTTTTAAACGACAAAGCATGGTTTGTGGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CCA 90 bp AGATCTATTTATTTTAAGGAATTGGCTCTTGCAATTATGGGGGCTGGCAAGTTAGATGGCGCTCCTCTCTaGCTAGCATACGCTGTTTAC +
Preference number: 4 (lower is better)
Translates to: RSIYFKELALAIMGAGKLDGAPL*LAYAVY
Trigger: GTAAACAGCGTATGCTAGCCAGAGAGGAGCGCCATC...TAACTTGCCAGCCCCCATAATTGCAAGAGCCAATTCCTTAAAATAAATAGATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394363.6
CDS-3UTR CCA 90 bp TATCTTCAATTGAGACTCAAGGGAGGGTATGCTTGCATTATTATAAATACCACACCCATGCCTTCTGCTTaGAGGCGGAATGGTACACAG +
Preference number: 4 (lower is better)
Translates to: YLQLRLKGGYACIIINTTPMPSA*RRNGTQ
Trigger: CTGTGTACCATTCCGCCTCCAAGCAGAAGGCATGGG...TGTGGTATTTATAATAATGCAAGCATACCCTCCCTTGAGTCTCAATTGAAGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CCA 90 bp AAGCCACAAACCATGCTTTGTCGTTTAAAAGGTGAACCTGGTCAGGCACCTTCTAATGCTTGCTCCAAATaGGTGAACATGAAGGAATGT +
Preference number: 4 (lower is better)
Translates to: KPQTMLCRLKGEPGQAPSNACSK*VNMKEC
Trigger: ACATTCCTTCATGTTCACCCATTTGGAGCAAGCATT...AGAAGGTGCCTGACCAGGTTCACCTTTTAAACGACAAAGCATGGTTTGTGGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CCA 90 bp CCCGAGACTGATGAATCAAAGCCTTCCGTAGCATTGATGAGAGATGCATCAGTGACATGCCAGTCATACTaGATACTTGCTTTCTGTAAA +
Preference number: 4 (lower is better)
Translates to: PETDESKPSVALMRDASVTCQSY*ILAFCK
Trigger: TTTACAGAAAGCAAGTATCCAGTATGACTGGCATGT...CACTGATGCATCTCTCATCAATGCTACGGAAGGCTTTGATTCATCAGTCTCGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CCA 90 bp AGATCTATTTATTTTAAGGAATTGGCTCTTGCAATTATGGGGGCTGGCAAGTTACTACCAAGGTGTCTCTaGCAATTCGCACTCCAGGTG +
Preference number: 4 (lower is better)
Translates to: RSIYFKELALAIMGAGKLLPRCL*QFALQV
Trigger: CACCTGGAGTGCGAATTGCCAGAGACACCTTGGTAG...TAACTTGCCAGCCCCCATAATTGCAAGAGCCAATTCCTTAAAATAAATAGATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394363.6
CDS-3UTR TCA 90 bp AAGCCACAAACCATGCTTTGTCGTTTAAAAGGTGAACCTGGTCAGGCACCTTCTTTTCTTCTTCTCGCCTaGTTCCCATTAATTCATCAT +
Preference number: 4 (lower is better)
Translates to: KPQTMLCRLKGEPGQAPSFLLLA*FPLIHH
Trigger: ATGATGAATTAATGGGAATCAGGCGAGAAGAAGAAA...AGAAGGTGCCTGACCAGGTTCACCTTTTAAACGACAAAGCATGGTTTGTGGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR TCA 90 bp TATCTTCAATTGAGACTCAAGGGAGGGTATGCTTGCATTATTATAAATACCACACTTAAGGCCTTCAGCTaGTCAGATGAGGTCCACCCA +
Preference number: 4 (lower is better)
Translates to: YLQLRLKGGYACIIINTTLKAFS*SDEVHP
Trigger: TGGGTGGACCTCATCTGATCAGCTGAAGGCCTTAAG...TGTGGTATTTATAATAATGCAAGCATACCCTCCCTTGAGTCTCAATTGAAGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394363.6
CDS-3UTR GCA 90 bp ATAGTATTTACAGCAGTACTCGGTTTGCAATTCAACACACTGACAACAGAAGCAAATAAAGACCATCTCTaGCTCAGGACATTCGCCCCA +
Preference number: 4 (lower is better)
Translates to: IVFTAVLGLQFNTLTTEANKDHL*LRTFAP
Trigger: TGGGGCGAATGTCCTGAGGCAGAGATGGTCTTTATT...TGCTTCTGTTGTCAGTGTGTTGAATTGCAAACCGAGTACTGCTGTAAATACTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR GCA 90 bp AAGCCACAAACCATGCTTTGTCGTTTAAAAGGTGAACCTGGTCAGGCACCTTCTTCCATTGGCTTTGCTTaGTCAGTACATTCTTTTATC +
Preference number: 4 (lower is better)
Translates to: KPQTMLCRLKGEPGQAPSSIGFA*SVHSFI
Trigger: GATAAAAGAATGTACTGAGCAAGCAAAGCCAATGGA...AGAAGGTGCCTGACCAGGTTCACCTTTTAAACGACAAAGCATGGTTTGTGGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR GCA 90 bp TATCTTCAATTGAGACTCAAGGGAGGGTATGCTTGCATTATTATAAATACCACATCAGCACGAATGGGCTaGTGTGGAACCCTGTTTCCA +
Preference number: 4 (lower is better)
Translates to: YLQLRLKGGYACIIINTTSARMG*CGTLFP
Trigger: TGGAAACAGGGTTCCACAGCAGCCCATTCGTGCTGA...TGTGGTATTTATAATAATGCAAGCATACCCTCCCTTGAGTCTCAATTGAAGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CCA 90 bp AATATTAATATAAATCCCTTCTGCCACTGTGTGCGTGCGTGTGTGTGTTTGTGCCAAACCAGGCATCATTaGAGTTATTGGTGGAATTCC +
Preference number: 4 (lower is better)
Translates to: NININPFCHCVRACVCLCQTRHH*SYWWNS
Trigger: GGAATTCCACCAATAACTCCAATGATGCCTGGTTTG...GCACAAACACACACACGCACGCACACAGTGGCAGAAGGGATTTATATTAATATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CCA 90 bp AATATTAATATAAATCCCTTCTGCCACTGTGTGCGTGCGTGTGTGTGTTTGTGCCATATCTGGAGGAATTaGTGGAGGTACTATTCCCAA +
Preference number: 4 (lower is better)
Translates to: NININPFCHCVRACVCLCHIWRN*WRYYSQ
Trigger: TTGGGAATAGTACCTCCACCAATTCCTCCAGATATG...GCACAAACACACACACGCACGCACACAGTGGCAGAAGGGATTTATATTAATATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CCA 90 bp TATCTTCAATTGAGACTCAAGGGAGGGTATGCTTGCATTATTATAAATACCACATCGGGTTGCAGGAGGTaGGAGATTTGGATTTGGAGG +
Preference number: 4 (lower is better)
Translates to: YLQLRLKGGYACIIINTTSGCRR*EIWIWR
Trigger: CCTCCAAATCCAAATCTCCCACCTCCTGCAACCCGA...TGTGGTATTTATAATAATGCAAGCATACCCTCCCTTGAGTCTCAATTGAAGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CCA 90 bp AGATCTATTTATTTTAAGGAATTGGCTCTTGCAATTATGGGGGCTGGCAAGTTATGTGCGAAATCAACGTaGAGTCTGCCTGTGTCCTTC +
Preference number: 4 (lower is better)
Translates to: RSIYFKELALAIMGAGKLCAKST*SLPVSF
Trigger: GAAGGACACAGGCAGACTCCACGTTGATTTCGCACA...TAACTTGCCAGCCCCCATAATTGCAAGAGCCAATTCCTTAAAATAAATAGATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394363.6
CDS-3UTR CCA 90 bp TATCTTCAATTGAGACTCAAGGGAGGGTATGCTTGCATTATTATAAATACCACATCCATTCTTCTACGATaGCGCTCCTCTCTGGCTAGC +
Preference number: 4 (lower is better)
Translates to: YLQLRLKGGYACIIINTTSILLR*RSSLAS
Trigger: GCTAGCCAGAGAGGAGCGCCATCGTAGAAGAATGGA...TGTGGTATTTATAATAATGCAAGCATACCCTCCCTTGAGTCTCAATTGAAGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CCA 90 bp CAAGCAGAAGTTTCTGAATGGTCCACTCACATGCTGCCATTGCGATTTGCCGATTTTTTGTATTCCTCTTaGACTTTGAGTAGATGCTGT +
Preference number: 4 (lower is better)
Translates to: QAEVSEWSTHMLPLRFADFLYSS*TLSRCC
Trigger: ACAGCATCTACTCAAAGTCCAAGAGGAATACAAAAA...ATCGGCAAATCGCAATGGCAGCATGTGAGTGGACCATTCAGAAACTTCTGCTTG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR TCA 90 bp AGAGATCTATTTATTTTAAGGAATTGGCTCTTGCAATTATGGGGGCTGGCAAGTACAGCACTTGTGGTTTaGGGCAATTTCTCTTTAGGG +
Preference number: 4 (lower is better)
Translates to: RDLFILRNWLLQLWGLASTALVV*GNFSLG
Trigger: CCCTAAAGAGAAATTGCCTCAAACCACAAGTGCTGT...ACTTGCCAGCCCCCATAATTGCAAGAGCCAATTCCTTAAAATAAATAGATCTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394363.6
CDS-3UTR GCA 90 bp AAGCCACAAACCATGCTTTGTCGTTTAAAAGGTGAACCTGGTCAGGCACCTTCTTTTCAGCAACAATGCTaGATTCATGATCTGAATAGT +
Preference number: 4 (lower is better)
Translates to: KPQTMLCRLKGEPGQAPSFQQQC*IHDLNS
Trigger: ACTATTCAGATCATGAATGCAGCATTGTTGCTGAAA...AGAAGGTGCCTGACCAGGTTCACCTTTTAAACGACAAAGCATGGTTTGTGGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CCA 90 bp ATAGTATTTACAGCAGTACTCGGTTTGCAATTCAACACACTGACAACAGAAGCAGTAGTGTCATTGCAGTaGAATCCACGTTCAGAGTTC +
Preference number: 4 (lower is better)
Translates to: IVFTAVLGLQFNTLTTEAVVSLQ*NPRSEF
Trigger: GAACTCTGAACGTGGATTCCACTGCAATGACACTAC...TGCTTCTGTTGTCAGTGTGTTGAATTGCAAACCGAGTACTGCTGTAAATACTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CCA 90 bp ATAGTATTTACAGCAGTACTCGGTTTGCAATTCAACACACTGACAACAGAAGCAATCTGGAGGAATTGGTaGAGGTACTATTCCCAAACC +
Preference number: 4 (lower is better)
Translates to: IVFTAVLGLQFNTLTTEAIWRNW*RYYSQT
Trigger: GGTTTGGGAATAGTACCTCCACCAATTCCTCCAGAT...TGCTTCTGTTGTCAGTGTGTTGAATTGCAAACCGAGTACTGCTGTAAATACTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CCA 90 bp TATCTTCAATTGAGACTCAAGGGAGGGTATGCTTGCATTATTATAAATACCACAAGGAGGTGGGAGATTTaGATTTGGAGGGAAGAGCGT +
Preference number: 4 (lower is better)
Translates to: YLQLRLKGGYACIIINTTRRWEI*IWREER
Trigger: ACGCTCTTCCCTCCAAATCCAAATCTCCCACCTCCT...TGTGGTATTTATAATAATGCAAGCATACCCTCCCTTGAGTCTCAATTGAAGATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CCA 90 bp TATCTTCAATTGAGACTCAAGGGAGGGTATGCTTGCATTATTATAAATACCACAACGAATGGGCTGCTGTaGAACCCTGTTTCCAGTTGT +
Preference number: 4 (lower is better)
Translates to: YLQLRLKGGYACIIINTTTNGLL*NPVSSC
Trigger: ACAACTGGAAACAGGGTTCCACAGCAGCCCATTCGT...TGTGGTATTTATAATAATGCAAGCATACCCTCCCTTGAGTCTCAATTGAAGATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CCA 90 bp TATCTTCAATTGAGACTCAAGGGAGGGTATGCTTGCATTATTATAAATACCACAAGTTTTCAGCACGAATaGGCTGCTGTGGAACCCTGT +
Preference number: 4 (lower is better)
Translates to: YLQLRLKGGYACIIINTTSFQHE*AAVEPC
Trigger: ACAGGGTTCCACAGCAGCCCATTCGTGCTGAAAACT...TGTGGTATTTATAATAATGCAAGCATACCCTCCCTTGAGTCTCAATTGAAGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR TCA 90 bp AATATTAATATAAATCCCTTCTGCCACTGTGTGCGTGCGTGTGTGTGTTTGTGCTTTCTTCTTCTCGCCTaGTTCCCATTAATTCATCAT +
Preference number: 4 (lower is better)
Translates to: NININPFCHCVRACVCLCFLLLA*FPLIHH
Trigger: ATGATGAATTAATGGGAATCAGGCGAGAAGAAGAAA...GCACAAACACACACACGCACGCACACAGTGGCAGAAGGGATTTATATTAATATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR GCA 90 bp ATAGTATTTACAGCAGTACTCGGTTTGCAATTCAACACACTGACAACAGAAGCACCACAAATACTGTTTTaGATCCTGGTGGTCTTTCTC +
Preference number: 4 (lower is better)
Translates to: IVFTAVLGLQFNTLTTEAPQILF*ILVVFL
Trigger: GAGAAAGACCACCAGGATGCAAAACAGTATTTGTGG...TGCTTCTGTTGTCAGTGTGTTGAATTGCAAACCGAGTACTGCTGTAAATACTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR GCA 90 bp ATAGTATTTACAGCAGTACTCGGTTTGCAATTCAACACACTGACAACAGAAGCAACTCCACATCGCTGGTaGAGATCTTATTATCAAGAC +
Preference number: 4 (lower is better)
Translates to: IVFTAVLGLQFNTLTTEATPHRW*RSYYQD
Trigger: GTCTTGATAATAAGATCTGCACCAGCGATGTGGAGT...TGCTTCTGTTGTCAGTGTGTTGAATTGCAAACCGAGTACTGCTGTAAATACTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CCA 90 bp AATATTAATATAAATCCCTTCTGCCACTGTGTGCGTGCGTGTGTGTGTTTGTGCCATCATTGGAGTTATTaGTGGAATTCCAGTCATCAT +
Preference number: 4 (lower is better)
Translates to: NININPFCHCVRACVCLCHHWSY*WNSSHH
Trigger: ATGATGACTGGAATTCCACCAATAACTCCAATGATG...GCACAAACACACACACGCACGCACACAGTGGCAGAAGGGATTTATATTAATATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR TCA 90 bp ATAGTATTTACAGCAGTACTCGGTTTGCAATTCAACACACTGACAACAGAAGCATTAAAGACAACCAATTaGCAGAAAGGGGAGGAAGTT +
Preference number: 4 (lower is better)
Translates to: IVFTAVLGLQFNTLTTEALKTTN*QKGEEV
Trigger: AACTTCCTCCCCTTTCTGTCAATTGGTTGTCTTTAA...TGCTTCTGTTGTCAGTGTGTTGAATTGCAAACCGAGTACTGCTGTAAATACTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CCA 90 bp TATCTTCAATTGAGACTCAAGGGAGGGTATGCTTGCATTATTATAAATACCACATACTACTGGCATATCTaGAGGAATTGGTGGAGGTAC +
Preference number: 4 (lower is better)
Translates to: YLQLRLKGGYACIIINTTYYWHI*RNWWRY
Trigger: GTACCTCCACCAATTCCTCCAGATATGCCAGTAGTA...TGTGGTATTTATAATAATGCAAGCATACCCTCCCTTGAGTCTCAATTGAAGATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR TCA 90 bp AGAGATCTATTTATTTTAAGGAATTGGCTCTTGCAATTATGGGGGCTGGCAAGTAGCTTTTACAGTGTATaGTCTCTTTTACTACTGGCA +
Preference number: 4 (lower is better)
Translates to: RDLFILRNWLLQLWGLASSFYSV*SLLLLA
Trigger: TGCCAGTAGTAAAAGAGATCATACACTGTAAAAGCT...ACTTGCCAGCCCCCATAATTGCAAGAGCCAATTCCTTAAAATAAATAGATCTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000394363.6
CDS-3UTR TCA 90 bp AGATCTATTTATTTTAAGGAATTGGCTCTTGCAATTATGGGGGCTGGCAAGTTAGGTCTGTACAGCTTCTaGGAATTTGGAATCATCTTT +
Preference number: 4 (lower is better)
Translates to: RSIYFKELALAIMGAGKLGLYSF*EFGIIF
Trigger: AAAGATGATTCCAAATTCTCAGAAGCTGTACAGACC...TAACTTGCCAGCCCCCATAATTGCAAGAGCCAATTCCTTAAAATAAATAGATCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394363.6
CDS-3UTR TCA 90 bp AGAGATCTATTTATTTTAAGGAATTGGCTCTTGCAATTATGGGGGCTGGCAAGTACTATCTGCTCAAATTaGATGAGAATTCCAGAAAGG +
Preference number: 4 (lower is better)
Translates to: RDLFILRNWLLQLWGLASTICSN*MRIPER
Trigger: CCTTTCTGGAATTCTCATTCAATTTGAGCAGATAGT...ACTTGCCAGCCCCCATAATTGCAAGAGCCAATTCCTTAAAATAAATAGATCTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394363.6
CDS-3UTR CCA 90 bp AGAGATCTATTTATTTTAAGGAATTGGCTCTTGCAATTATGGGGGCTGGCAAGTAAGTTACAGCACTTGTaGTTTGAGGCAATTTCTCTT +
Preference number: 4 (lower is better)
Translates to: RDLFILRNWLLQLWGLASKLQHL*FEAISL
Trigger: AAGAGAAATTGCCTCAAACCACAAGTGCTGTAACTT...ACTTGCCAGCCCCCATAATTGCAAGAGCCAATTCCTTAAAATAAATAGATCTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394363.6
3UTR CAA 72 bp TGGCTTTGCTTGCTCAGTACATTCTTTTATCTTCAATaGAGACTCAAGGGAGGGTATGCTTGCATTATTATA +
Preference number: 4 (lower is better)
Translates to: WLCLLSTFFYLQ*RLKGGYACIII
Trigger: TATAATAATGCAAGCATACCCTCCCTTGAGTCTCAATTGAAGATAAAAGAATGTACTGAGCAAGCAAAGCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338144.7
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR TCA 90 bp TATCTTCAATTGAGACTCAAGGGAGGGTATGCTTGCATTATTATAAATACCACAGGTCTGTACAGCTTCTaGGAATTTGGAATCATCTTT +
Preference number: 4 (lower is better)
Translates to: YLQLRLKGGYACIIINTTGLYSF*EFGIIF
Trigger: AAAGATGATTCCAAATTCTCAGAAGCTGTACAGACC...TGTGGTATTTATAATAATGCAAGCATACCCTCCCTTGAGTCTCAATTGAAGATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CCA 90 bp TATCTTCAATTGAGACTCAAGGGAGGGTATGCTTGCATTATTATAAATACCACAAATGCTTGCTCCAAATaGGTGAACATGAAGGAATGT +
Preference number: 4 (lower is better)
Translates to: YLQLRLKGGYACIIINTTNACSK*VNMKEC
Trigger: ACATTCCTTCATGTTCACCCATTTGGAGCAAGCATT...TGTGGTATTTATAATAATGCAAGCATACCCTCCCTTGAGTCTCAATTGAAGATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CCA 90 bp ATAGTATTTACAGCAGTACTCGGTTTGCAATTCAACACACTGACAACAGAAGCATTTATTTTAAGGAATTaGCTCTTGCAATTATGGGGG +
Preference number: 4 (lower is better)
Translates to: IVFTAVLGLQFNTLTTEAFILRN*LLQLWG
Trigger: CCCCCATAATTGCAAGAGCCAATTCCTTAAAATAAA...TGCTTCTGTTGTCAGTGTGTTGAATTGCAAACCGAGTACTGCTGTAAATACTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394363.6
CDS-3UTR TCA 90 bp TATCTTCAATTGAGACTCAAGGGAGGGTATGCTTGCATTATTATAAATACCACAAGCTTTTACAGTGTATaGTCTCTTTTACTACTGGCA +
Preference number: 4 (lower is better)
Translates to: YLQLRLKGGYACIIINTTSFYSV*SLLLLA
Trigger: TGCCAGTAGTAAAAGAGATCATACACTGTAAAAGCT...TGTGGTATTTATAATAATGCAAGCATACCCTCCCTTGAGTCTCAATTGAAGATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR TCA 90 bp TATCTTCAATTGAGACTCAAGGGAGGGTATGCTTGCATTATTATAAATACCACATTTCTTCTTCTCGCCTaGTTCCCATTAATTCATCAT +
Preference number: 4 (lower is better)
Translates to: YLQLRLKGGYACIIINTTFLLLA*FPLIHH
Trigger: ATGATGAATTAATGGGAATCAGGCGAGAAGAAGAAA...TGTGGTATTTATAATAATGCAAGCATACCCTCCCTTGAGTCTCAATTGAAGATA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR GCA 90 bp TATCTTCAATTGAGACTCAAGGGAGGGTATGCTTGCATTATTATAAATACCACAAAGGGAGGGTATGCTTaGATTATTATAAATACCACA +
Preference number: 4 (lower is better)
Translates to: YLQLRLKGGYACIIINTTKGGYA*IIINTT
Trigger: TGTGGTATTTATAATAATGCAAGCATACCCTCCCTT...TGTGGTATTTATAATAATGCAAGCATACCCTCCCTTGAGTCTCAATTGAAGATA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS GCA 90 bp GTAGTGCCCTCGCGGCGCCCCACGCCGCGCCACTCTCTTCCGAAATaGCCGCCTCGCGCTTCCAGGCCTAGACCCGGCACTCTGGCCCAA +
Preference number: 5 (lower is better)
Translates to: VVPSRRPTPRHSLPK*PPRASRPRPGTLAQ
Trigger: TTGGGCCAGAGTGCCGGGTCTAGGCCTGGAAGCGCGAGGCGGGCATTTCGGAAGAGAGTGGCGCGGCGTGGGGCGCCGCGAGGGCACTAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370935.5
CDS-3UTR CAA 90 bp GCTGGCAAGTTAGAGATTTGTAGGGCAGGCCGGCAGGCTGGAAGTTCTGGCAGGTCCCATGCCTTCTGCTaGGAGGCGGAATGGTACACA +
Preference number: 5 (lower is better)
Translates to: AGKLEICRAGRQAGSSGRSHAFC*EAEWYT
Trigger: TGTGTACCATTCCGCCTCCAAGCAGAAGGCATGGGA...CCTGCCAGAACTTCCAGCCTGCCGGCCTGCCCTACAAATCTCTAACTTGCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394363.6
CDS GCA 90 bp TCAATGAGGCCTTCTGTGACCAGAGGGCCACTGGCACTACCAAACTaGAGGGGCTCGTTGTTGTTAGCAGGGTCAAAGGGCAGCTGGTTC +
Preference number: 5 (lower is better)
Translates to: SMRPSVTRGPLALPN*RGSLLLAGSKGSWF
Trigger: GAACCAGCTGCCCTTTGACCCTGCTAACAACAACGAGCCCCTGCAGTTTGGTAGTGCCAGTGGCCCTCTGGTCACAGAAGGCCTCATTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338144.8
ENST00000394363.6
ENST00000432489.5
ENST00000492263.1
CDS CCA 90 bp TCTCATGGGCAGCTTTCTCGTTCACCAGGCGGCGGACATGGCTGTTaGCCGACTGGATCATGGAGTAGAAGTTATTGGCGCTACGACGGT +
Preference number: 5 (lower is better)
Translates to: SHGQLSRSPGGGHGC*PTGSWSRSYWRYDG
Trigger: ACCGTCGTAGCGCCAATAACTTCTACTCCATGATCCAGTCGGCCAACAGCCATGTCCGCCGCCTGGTGAACGAGAAAGCTGCCCATGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338144.8
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
ENST00000432489.5
CDS-3UTR CAA 90 bp GCTGGCAAGTTAGAGATTTGTAGGGCAGGCCGGCAGGCTGGAAGTTCTGGCAGGATGCTGTTGCATTCCTaGCAGGGCTTGTTGCAGGAG +
Preference number: 5 (lower is better)
Translates to: AGKLEICRAGRQAGSSGRMLLHS*QGLLQE
Trigger: CTCCTGCAACAAGCCCTGCAAGGAATGCAACAGCAT...CCTGCCAGAACTTCCAGCCTGCCGGCCTGCCCTACAAATCTCTAACTTGCCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394363.6
CDS-3UTR CAA 90 bp CCACTCACATGCTGCCATTGCGATTTGCCGATGGGCACTACCAAGGTGTCTCTGTCCTTGCAGGGCTTGTaGCAGGAGTTTCAGCTGCTG +
Preference number: 5 (lower is better)
Translates to: PLTCCHCDLPMGTTKVSLSLQGL*QEFQLL
Trigger: CAGCAGCTGAAACTCCTGCAACAAGCCCTGCAAGGA...CAGAGACACCTTGGTAGTGCCCATCGGCAAATCGCAATGGCAGCATGTGAGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CAA 90 bp CAGGGGGAAGCCAGTTTTCAGCACGAATGGGCTGCTGTGGAACCCTGTTTCCAGCATTCCTTGCAGGGCTaGTTGCAGGAGTTTCAGCTG +
Preference number: 5 (lower is better)
Translates to: QGEASFQHEWAAVEPCFQHSLQG*LQEFQL
Trigger: CAGCTGAAACTCCTGCAACAAGCCCTGCAAGGAATG...CTGGAAACAGGGTTCCACAGCAGCCCATTCGTGCTGAAAACTGGCTTCCCCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CAA 90 bp CCACTCACATGCTGCCATTGCGATTTGCCGATGGGCACTACCAAGGTGTCTCTGTGCTGCCATTGCGATTaGCCGATGGGCACTACCAAG +
Preference number: 5 (lower is better)
Translates to: PLTCCHCDLPMGTTKVSLCCHCD*PMGTTK
Trigger: CTTGGTAGTGCCCATCGGCAAATCGCAATGGCAGCA...CAGAGACACCTTGGTAGTGCCCATCGGCAAATCGCAATGGCAGCATGTGAGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CAA 90 bp CAGGGGGAAGCCAGTTTTCAGCACGAATGGGCTGCTGTGGAACCCTGTTTCCAGTGTGCCATGGTGGTTTaGCTGCACCTCAACCCATCA +
Preference number: 5 (lower is better)
Translates to: QGEASFQHEWAAVEPCFQCAMVV*LHLNPS
Trigger: TGATGGGTTGAGGTGCAGCAAAACCACCATGGCACA...CTGGAAACAGGGTTCCACAGCAGCCCATTCGTGCTGAAAACTGGCTTCCCCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CAA 90 bp CCACTCACATGCTGCCATTGCGATTTGCCGATGGGCACTACCAAGGTGTCTCTGAACTGCAGGGGCTCGTaGTTGTTAGCAGGGTCAAAG +
Preference number: 5 (lower is better)
Translates to: PLTCCHCDLPMGTTKVSLNCRGS*LLAGSK
Trigger: CTTTGACCCTGCTAACAACAACGAGCCCCTGCAGTT...CAGAGACACCTTGGTAGTGCCCATCGGCAAATCGCAATGGCAGCATGTGAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394363.6
CDS-3UTR CAA 90 bp TGCCTCAGGACATTCGCCCCAAACCTCCATCCTCTCTGTTTACTTTCCACCAAGTTGGCGCTACGACGGTaGACCTCTCCTCGCTCTATC +
Preference number: 5 (lower is better)
Translates to: CLRTFAPNLHPLCLLSTKLALRR*TSPRSI
Trigger: GATAGAGCGAGGAGAGGTCAACCGTCGTAGCGCCAA...CTTGGTGGAAAGTAAACAGAGAGGATGGAGGTTTGGGGCGAATGTCCTGAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CAA 90 bp CCTCAGGACATTCGCCCCAAACCTCCATCCTCTCTGTTTACTTTCCACCAAGCATTGGCGCTACGACGGTaGACCTCTCCTCGCTCTATC +
Preference number: 5 (lower is better)
Translates to: PQDIRPKPPSSLFTFHQALALRR*TSPRSI
Trigger: GATAGAGCGAGGAGAGGTCAACCGTCGTAGCGCCAA...TGCTTGGTGGAAAGTAAACAGAGAGGATGGAGGTTTGGGGCGAATGTCCTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CAA 90 bp CCACTCACATGCTGCCATTGCGATTTGCCGATGGGCACTACCAAGGTGTCTCTGATGCTGTTGCATTCCTaGCAGGGCTTGTTGCAGGAG +
Preference number: 5 (lower is better)
Translates to: PLTCCHCDLPMGTTKVSLMLLHS*QGLLQE
Trigger: CTCCTGCAACAAGCCCTGCAAGGAATGCAACAGCAT...CAGAGACACCTTGGTAGTGCCCATCGGCAAATCGCAATGGCAGCATGTGAGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CAA 90 bp GCTGGCAAGTTAGAGATTTGTAGGGCAGGCCGGCAGGCTGGAAGTTCTGGCAGGAAGCCTTCCGTAGCATaGATGAGAGATGCATCAGTG +
Preference number: 5 (lower is better)
Translates to: AGKLEICRAGRQAGSSGRKPSVA*MRDASV
Trigger: CACTGATGCATCTCTCATCAATGCTACGGAAGGCTT...CCTGCCAGAACTTCCAGCCTGCCGGCCTGCCCTACAAATCTCTAACTTGCCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394363.6
CDS CCA 90 bp CGAATTTCCTCAGCTTGTTTGCACCACACGCTGATGTTCTTCCGCTaGGCTTTTGTGAAGTGGTCCCATGCCTTCTGCTTGGAGGCGGAA +
Preference number: 5 (lower is better)
Translates to: RISSACLHHTLMFFR*AFVKWSHAFCLEAE
Trigger: TTCCGCCTCCAAGCAGAAGGCATGGGACCACTTCACAAAAGCCCAGCGGAAGAACATCAGCGTGTGGTGCAAACAAGCTGAGGAAATTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338144.8
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
ENST00000432489.5
CDS-3UTR CAA 90 bp GCTGGCAAGTTAGAGATTTGTAGGGCAGGCCGGCAGGCTGGAAGTTCTGGCAGGTTCCAAGATTATTCATaGCTGTGGCCCATGCAGTTG +
Preference number: 5 (lower is better)
Translates to: AGKLEICRAGRQAGSSGRFQDYS*LWPMQL
Trigger: CAACTGCATGGGCCACAGCAATGAATAATCTTGGAA...CCTGCCAGAACTTCCAGCCTGCCGGCCTGCCCTACAAATCTCTAACTTGCCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394363.6
CDS-3UTR CAA 90 bp CAGGGGGAAGCCAGTTTTCAGCACGAATGGGCTGCTGTGGAACCCTGTTTCCAGGCATATCTGGAGGAATaGGTGGAGGTACTATTCCCA +
Preference number: 5 (lower is better)
Translates to: QGEASFQHEWAAVEPCFQAYLEE*VEVLFP
Trigger: TGGGAATAGTACCTCCACCAATTCCTCCAGATATGC...CTGGAAACAGGGTTCCACAGCAGCCCATTCGTGCTGAAAACTGGCTTCCCCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CAA 90 bp ACCACCACCACACACAATAAAGACCATCTCTGCCTCAGGACATTCGCCCCAAACGTGGGAGATTTGGATTaGGAGGGAAGAGCGTGCAGC +
Preference number: 5 (lower is better)
Translates to: TTTTHNKDHLCLRTFAPNVGDLD*EGRACS
Trigger: GCTGCACGCTCTTCCCTCCAAATCCAAATCTCCCAC...GTTTGGGGCGAATGTCCTGAGGCAGAGATGGTCTTTATTGTGTGTGGTGGTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CAA 90 bp ACCACCACCACACACAATAAAGACCATCTCTGCCTCAGGACATTCGCCCCAAACGTGGTCTTTCTCGGGTaGCAGGAGGTGGGAGATTTG +
Preference number: 5 (lower is better)
Translates to: TTTTHNKDHLCLRTFAPNVVFLG*QEVGDL
Trigger: CAAATCTCCCACCTCCTGCAACCCGAGAAAGACCAC...GTTTGGGGCGAATGTCCTGAGGCAGAGATGGTCTTTATTGTGTGTGGTGGTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CAA 90 bp CCACTCACATGCTGCCATTGCGATTTGCCGATGGGCACTACCAAGGTGTCTCTGGACAGATACAGGGCTTaGTCCACCATGTACTCCTCA +
Preference number: 5 (lower is better)
Translates to: PLTCCHCDLPMGTTKVSLDRYRA*STMYSS
Trigger: TGAGGAGTACATGGTGGACAAAGCCCTGTATCTGTC...CAGAGACACCTTGGTAGTGCCCATCGGCAAATCGCAATGGCAGCATGTGAGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CAA 90 bp TGCCTCAGGACATTCGCCCCAAACCTCCATCCTCTCTGTTTACTTTCCACCAAGCTGCCTGTGTCCTTCTaGTCAGTACTAGAGCCCAGG +
Preference number: 5 (lower is better)
Translates to: CLRTFAPNLHPLCLLSTKLPVSF*SVLEPR
Trigger: CCTGGGCTCTAGTACTGACAAGAAGGACACAGGCAG...CTTGGTGGAAAGTAAACAGAGAGGATGGAGGTTTGGGGCGAATGTCCTGAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CAA 90 bp AAGCCACAAACCATGCTTTGTCGTTTAAAAGGTGAACCTGGTCAGGCACCTTCTCGGCGGACATGGCTGTaGGCCGACTGGATCATGGAG +
Preference number: 5 (lower is better)
Translates to: KPQTMLCRLKGEPGQAPSRRTWL*ADWIME
Trigger: CTCCATGATCCAGTCGGCCAACAGCCATGTCCGCCG...AGAAGGTGCCTGACCAGGTTCACCTTTTAAACGACAAAGCATGGTTTGTGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CAA 90 bp ACATGCTGCCATTGCGATTTGCCGATGGGCACTACCAAGGTGTCTCTGGCAATTTCCCATGCCTTCTGCTaGGAGGCGGAATGGTACACA +
Preference number: 5 (lower is better)
Translates to: TCCHCDLPMGTTKVSLAISHAFC*EAEWYT
Trigger: TGTGTACCATTCCGCCTCCAAGCAGAAGGCATGGGA...AATTGCCAGAGACACCTTGGTAGTGCCCATCGGCAAATCGCAATGGCAGCATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CAA 90 bp CCACTCACATGCTGCCATTGCGATTTGCCGATGGGCACTACCAAGGTGTCTCTGGCGAATTTCCTCAGCTaGTTTGCACCACACGCTGAT +
Preference number: 5 (lower is better)
Translates to: PLTCCHCDLPMGTTKVSLANFLS*FAPHAD
Trigger: ATCAGCGTGTGGTGCAAACAAGCTGAGGAAATTCGC...CAGAGACACCTTGGTAGTGCCCATCGGCAAATCGCAATGGCAGCATGTGAGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CAA 90 bp ACCACCACCACACACAATAAAGACCATCTCTGCCTCAGGACATTCGCCCCAAACTCCTTGCAGGGCTTGTaGCAGGAGTTTCAGCTGCTG +
Preference number: 5 (lower is better)
Translates to: TTTTHNKDHLCLRTFAPNSLQGL*QEFQLL
Trigger: CAGCAGCTGAAACTCCTGCAACAAGCCCTGCAAGGA...GTTTGGGGCGAATGTCCTGAGGCAGAGATGGTCTTTATTGTGTGTGGTGGTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CAA 90 bp ACATGCTGCCATTGCGATTTGCCGATGGGCACTACCAAGGTGTCTCTGGCAATTTGCTGCCATTGCGATTaGCCGATGGGCACTACCAAG +
Preference number: 5 (lower is better)
Translates to: TCCHCDLPMGTTKVSLAICCHCD*PMGTTK
Trigger: CTTGGTAGTGCCCATCGGCAAATCGCAATGGCAGCA...AATTGCCAGAGACACCTTGGTAGTGCCCATCGGCAAATCGCAATGGCAGCATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CAA 90 bp GCCGGCAGGCTGGAAGTTCTGGCAGGAGTTGGATGTTGCAGTTTTGAGTCCAAATGTGCCATGGTGGTTTaGCTGCACCTCAACCCATCA +
Preference number: 5 (lower is better)
Translates to: AGRLEVLAGVGCCSFESKCAMVV*LHLNPS
Trigger: TGATGGGTTGAGGTGCAGCAAAACCACCATGGCACA...TTTGGACTCAAAACTGCAACATCCAACTCCTGCCAGAACTTCCAGCCTGCCGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394363.6
CDS CCA 90 bp TCCAGGCTGGCTCCAACTCCAGTCATTTCCTGCTTGAAGGTATGCTaGAGTCTACCCATGAGACACTCCACATCGCTGGTGCAGATCTTA +
Preference number: 5 (lower is better)
Translates to: SRLAPTPVISCLKVC*SLPMRHSTSLVQIL
Trigger: TAAGATCTGCACCAGCGATGTGGAGTGTCTCATGGGTAGACTCCAGCATACCTTCAAGCAGGAAATGACTGGAGTTGGAGCCAGCCTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338144.8
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CAA 90 bp GCTGGCAAGTTAGAGATTTGTAGGGCAGGCCGGCAGGCTGGAAGTTCTGGCAGGTGTGTTCTCCAAGAATaGATCTCAAATCAGGTTCCC +
Preference number: 5 (lower is better)
Translates to: AGKLEICRAGRQAGSSGRCVLQE*ISNQVP
Trigger: GGGAACCTGATTTGAGATCAATTCTTGGAGAACACA...CCTGCCAGAACTTCCAGCCTGCCGGCCTGCCCTACAAATCTCTAACTTGCCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394363.6
CDS-3UTR CAA 90 bp GTTTTCAGCACGAATGGGCTGCTGTGGAACCCTGTTTCCAGTTGTCAAGACAGAGTGGTCTTTCTCGGGTaGCAGGAGGTGGGAGATTTG +
Preference number: 5 (lower is better)
Translates to: VFSTNGLLWNPVSSCQDRVVFLG*QEVGDL
Trigger: CAAATCTCCCACCTCCTGCAACCCGAGAAAGACCAC...TCTGTCTTGACAACTGGAAACAGGGTTCCACAGCAGCCCATTCGTGCTGAAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CAA 90 bp GCACGAATGGGCTGCTGTGGAACCCTGTTTCCAGTTGTCAAGACAGACTTGGCAGACAGATACAGGGCTTaGTCCACCATGTACTCCTCA +
Preference number: 5 (lower is better)
Translates to: ARMGCCGTLFPVVKTDLADRYRA*STMYSS
Trigger: TGAGGAGTACATGGTGGACAAAGCCCTGTATCTGTC...TGCCAAGTCTGTCTTGACAACTGGAAACAGGGTTCCACAGCAGCCCATTCGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CAA 90 bp GGCTGCTGTGGAACCCTGTTTCCAGTTGTCAAGACAGACTTGGCATCTTTTTCCCTGCCTGTGTCCTTCTaGTCAGTACTAGAGCCCAGG +
Preference number: 5 (lower is better)
Translates to: GCCGTLFPVVKTDLASFSLPVSF*SVLEPR
Trigger: CCTGGGCTCTAGTACTGACAAGAAGGACACAGGCAG...GGAAAAAGATGCCAAGTCTGTCTTGACAACTGGAAACAGGGTTCCACAGCAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CAA 90 bp CCCGAGACTGATGAATCAAAGCCTTCCGTAGCATTGATGAGAGATGCATCAGTGTTGGCGCTACGACGGTaGACCTCTCCTCGCTCTATC +
Preference number: 5 (lower is better)
Translates to: PETDESKPSVALMRDASVLALRR*TSPRSI
Trigger: GATAGAGCGAGGAGAGGTCAACCGTCGTAGCGCCAA...CACTGATGCATCTCTCATCAATGCTACGGAAGGCTTTGATTCATCAGTCTCGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CAA 90 bp GGGCTGCTGTGGAACCCTGTTTCCAGTTGTCAAGACAGACTTGGCATCTTTTTCTCCCATGCCTTCTGCTaGGAGGCGGAATGGTACACA +
Preference number: 5 (lower is better)
Translates to: GLLWNPVSSCQDRLGIFFSHAFC*EAEWYT
Trigger: TGTGTACCATTCCGCCTCCAAGCAGAAGGCATGGGA...GAAAAAGATGCCAAGTCTGTCTTGACAACTGGAAACAGGGTTCCACAGCAGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CAA 90 bp CAGGGGGAAGCCAGTTTTCAGCACGAATGGGCTGCTGTGGAACCCTGTTTCCAGGACTTTGCCTTGTTCTaGCTTGAGCAGTTCTACTTC +
Preference number: 5 (lower is better)
Translates to: QGEASFQHEWAAVEPCFQDFALF*LEQFYF
Trigger: GAAGTAGAACTGCTCAAGCAAGAACAAGGCAAAGTC...CTGGAAACAGGGTTCCACAGCAGCCCATTCGTGCTGAAAACTGGCTTCCCCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CAA 90 bp CAGGGGGAAGCCAGTTTTCAGCACGAATGGGCTGCTGTGGAACCCTGTTTCCAGTTCAGCTGCTGTTCTTaGTTAGGGTCATCTTCTCTG +
Preference number: 5 (lower is better)
Translates to: QGEASFQHEWAAVEPCFQFSCCS*LGSSSL
Trigger: CAGAGAAGATGACCCTAACAAAGAACAGCAGCTGAA...CTGGAAACAGGGTTCCACAGCAGCCCATTCGTGCTGAAAACTGGCTTCCCCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CAA 90 bp GGCTGCTGTGGAACCCTGTTTCCAGTTGTCAAGACAGACTTGGCATCTTTTTCCTCCTTGCAGGGCTTGTaGCAGGAGTTTCAGCTGCTG +
Preference number: 5 (lower is better)
Translates to: GCCGTLFPVVKTDLASFSSLQGL*QEFQLL
Trigger: CAGCAGCTGAAACTCCTGCAACAAGCCCTGCAAGGA...GGAAAAAGATGCCAAGTCTGTCTTGACAACTGGAAACAGGGTTCCACAGCAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CAA 90 bp CAGGGGGAAGCCAGTTTTCAGCACGAATGGGCTGCTGTGGAACCCTGTTTCCAGGCTTCACGTTCAGATTaGATAGGACTGCTGTTCATG +
Preference number: 5 (lower is better)
Translates to: QGEASFQHEWAAVEPCFQASRSD*IGLLFM
Trigger: CATGAACAGCAGTCCTATCAAATCTGAACGTGAAGC...CTGGAAACAGGGTTCCACAGCAGCCCATTCGTGCTGAAAACTGGCTTCCCCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CAA 90 bp CCACTCACATGCTGCCATTGCGATTTGCCGATGGGCACTACCAAGGTGTCTCTGCTGGTCTACTGGGGATaGGAAAGACAATGGCAGTTA +
Preference number: 5 (lower is better)
Translates to: PLTCCHCDLPMGTTKVSLLVYWG*ERQWQL
Trigger: TAACTGCCATTGTCTTTCCAATCCCCAGTAGACCAG...CAGAGACACCTTGGTAGTGCCCATCGGCAAATCGCAATGGCAGCATGTGAGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CAA 90 bp GTTTTCAGCACGAATGGGCTGCTGTGGAACCCTGTTTCCAGTTGTCAAGACAGATGCTGCCATTGCGATTaGCCGATGGGCACTACCAAG +
Preference number: 5 (lower is better)
Translates to: VFSTNGLLWNPVSSCQDRCCHCD*PMGTTK
Trigger: CTTGGTAGTGCCCATCGGCAAATCGCAATGGCAGCA...TCTGTCTTGACAACTGGAAACAGGGTTCCACAGCAGCCCATTCGTGCTGAAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CAA 90 bp CCACTCACATGCTGCCATTGCGATTTGCCGATGGGCACTACCAAGGTGTCTCTGGAACCCTGTTTCCAGTaGTCAAGACAGACTTGGCAT +
Preference number: 5 (lower is better)
Translates to: PLTCCHCDLPMGTTKVSLEPCFQ*SRQTWH
Trigger: ATGCCAAGTCTGTCTTGACAACTGGAAACAGGGTTC...CAGAGACACCTTGGTAGTGCCCATCGGCAAATCGCAATGGCAGCATGTGAGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CAA 90 bp CAGGGGGAAGCCAGTTTTCAGCACGAATGGGCTGCTGTGGAACCCTGTTTCCAGAAGTTCTGGCAGGAGTaGGATGTTGCAGTTTTGAGT +
Preference number: 5 (lower is better)
Translates to: QGEASFQHEWAAVEPCFQKFWQE*DVAVLS
Trigger: ACTCAAAACTGCAACATCCAACTCCTGCCAGAACTT...CTGGAAACAGGGTTCCACAGCAGCCCATTCGTGCTGAAAACTGGCTTCCCCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394363.6
CDS CCA 90 bp GGTGGAGATGGTGGACGCAATCTTTCTTCTTCCATTCTTCTACGATaGCGCTCCTCTCTGGCTAGCATACGCTGTTTACACTCCCACTCA +
Preference number: 5 (lower is better)
Translates to: GGDGGRNLSSSILLR*RSSLASIRCLHSHS
Trigger: TGAGTGGGAGTGTAAACAGCGTATGCTAGCCAGAGAGGAGCGCCATCGTAGAAGAATGGAAGAAGAAAGATTGCGTCCACCATCTCCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338144.8
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
ENST00000432489.5
CDS-3UTR CAA 90 bp CAGGGGGAAGCCAGTTTTCAGCACGAATGGGCTGCTGTGGAACCCTGTTTCCAGGCATCATTGGAGTTATaGGTGGAATTCCAGTCATCA +
Preference number: 5 (lower is better)
Translates to: QGEASFQHEWAAVEPCFQASLEL*VEFQSS
Trigger: TGATGACTGGAATTCCACCAATAACTCCAATGATGC...CTGGAAACAGGGTTCCACAGCAGCCCATTCGTGCTGAAAACTGGCTTCCCCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CAA 90 bp CCCGAGACTGATGAATCAAAGCCTTCCGTAGCATTGATGAGAGATGCATCAGTGGTGGGAGATTTGGATTaGGAGGGAAGAGCGTGCAGC +
Preference number: 5 (lower is better)
Translates to: PETDESKPSVALMRDASVVGDLD*EGRACS
Trigger: GCTGCACGCTCTTCCCTCCAAATCCAAATCTCCCAC...CACTGATGCATCTCTCATCAATGCTACGGAAGGCTTTGATTCATCAGTCTCGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CAA 90 bp CCACTCACATGCTGCCATTGCGATTTGCCGATGGGCACTACCAAGGTGTCTCTGCCCACAAATACTGTTTaGCATCCTGGTGGTCTTTCT +
Preference number: 5 (lower is better)
Translates to: PLTCCHCDLPMGTTKVSLPTNTV*HPGGLS
Trigger: AGAAAGACCACCAGGATGCAAAACAGTATTTGTGGG...CAGAGACACCTTGGTAGTGCCCATCGGCAAATCGCAATGGCAGCATGTGAGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CAA 90 bp CAAGCAGAAGTTTCTGAATGGTCCACTCACATGCTGCCATTGCGATTTGCCGATCTGCCTGTGTCCTTCTaGTCAGTACTAGAGCCCAGG +
Preference number: 5 (lower is better)
Translates to: QAEVSEWSTHMLPLRFADLPVSF*SVLEPR
Trigger: CCTGGGCTCTAGTACTGACAAGAAGGACACAGGCAG...ATCGGCAAATCGCAATGGCAGCATGTGAGTGGACCATTCAGAAACTTCTGCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CAA 90 bp AATATTAATATAAATCCCTTCTGCCACTGTGTGCGTGCGTGTGTGTGTTTGTGCCGGCGGACATGGCTGTaGGCCGACTGGATCATGGAG +
Preference number: 5 (lower is better)
Translates to: NININPFCHCVRACVCLCRRTWL*ADWIME
Trigger: CTCCATGATCCAGTCGGCCAACAGCCATGTCCGCCG...GCACAAACACACACACGCACGCACACAGTGGCAGAAGGGATTTATATTAATATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CAA 90 bp GCACGAATGGGCTGCTGTGGAACCCTGTTTCCAGTTGTCAAGACAGACTTGGCAATTTCCTCAGCTTGTTaGCACCACACGCTGATGTTC +
Preference number: 5 (lower is better)
Translates to: ARMGCCGTLFPVVKTDLAISSAC*HHTLMF
Trigger: GAACATCAGCGTGTGGTGCAAACAAGCTGAGGAAAT...TGCCAAGTCTGTCTTGACAACTGGAAACAGGGTTCCACAGCAGCCCATTCGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CAA 90 bp TGCCTCAGGACATTCGCCCCAAACCTCCATCCTCTCTGTTTACTTTCCACCAAGGCGAATTTCCTCAGCTaGTTTGCACCACACGCTGAT +
Preference number: 5 (lower is better)
Translates to: CLRTFAPNLHPLCLLSTKANFLS*FAPHAD
Trigger: ATCAGCGTGTGGTGCAAACAAGCTGAGGAAATTCGC...CTTGGTGGAAAGTAAACAGAGAGGATGGAGGTTTGGGGCGAATGTCCTGAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CAA 90 bp GGGCTGCTGTGGAACCCTGTTTCCAGTTGTCAAGACAGACTTGGCATCTTTTTCTGTGCCATGGTGGTTTaGCTGCACCTCAACCCATCA +
Preference number: 5 (lower is better)
Translates to: GLLWNPVSSCQDRLGIFFCAMVV*LHLNPS
Trigger: TGATGGGTTGAGGTGCAGCAAAACCACCATGGCACA...GAAAAAGATGCCAAGTCTGTCTTGACAACTGGAAACAGGGTTCCACAGCAGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS GCA 90 bp TTTGCTCTGTCCCATTTTCAGGCAGACCACCCACAAATACTGTTTTaGATCCTGGTGGTCTTTCTCGGGTTGCAGGAGGTGGGAGATTTG +
Preference number: 5 (lower is better)
Translates to: FALSHFQADHPQILF*ILVVFLGLQEVGDL
Trigger: CAAATCTCCCACCTCCTGCAACCCGAGAAAGACCACCAGGATGCAAAACAGTATTTGTGGGTGGTCTGCCTGAAAATGGGACAGAGCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000338144.8
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
ENST00000432489.5
ENST00000492263.1
CDS-3UTR CAA 90 bp ACCACCACCACACACAATAAAGACCATCTCTGCCTCAGGACATTCGCCCCAAACGCATATCTGGAGGAATaGGTGGAGGTACTATTCCCA +
Preference number: 5 (lower is better)
Translates to: TTTTHNKDHLCLRTFAPNAYLEE*VEVLFP
Trigger: TGGGAATAGTACCTCCACCAATTCCTCCAGATATGC...GTTTGGGGCGAATGTCCTGAGGCAGAGATGGTCTTTATTGTGTGTGGTGGTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CAA 90 bp AAGCCACAAACCATGCTTTGTCGTTTAAAAGGTGAACCTGGTCAGGCACCTTCTGTGGGAGATTTGGATTaGGAGGGAAGAGCGTGCAGC +
Preference number: 5 (lower is better)
Translates to: KPQTMLCRLKGEPGQAPSVGDLD*EGRACS
Trigger: GCTGCACGCTCTTCCCTCCAAATCCAAATCTCCCAC...AGAAGGTGCCTGACCAGGTTCACCTTTTAAACGACAAAGCATGGTTTGTGGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CAA 90 bp CCACTCACATGCTGCCATTGCGATTTGCCGATGGGCACTACCAAGGTGTCTCTGAACTTCCACAATGATTaGCTCTGTCCCATTTTCAGG +
Preference number: 5 (lower is better)
Translates to: PLTCCHCDLPMGTTKVSLNFHND*LCPIFR
Trigger: CCTGAAAATGGGACAGAGCAAATCATTGTGGAAGTT...CAGAGACACCTTGGTAGTGCCCATCGGCAAATCGCAATGGCAGCATGTGAGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CAA 90 bp CCTCAGGACATTCGCCCCAAACCTCCATCCTCTCTGTTTACTTTCCACCAAGCATGGCAGAAGTTCTTCTaGCTCTTGCGAATGGCAATG +
Preference number: 5 (lower is better)
Translates to: PQDIRPKPPSSLFTFHQAWQKFF*LLRMAM
Trigger: CATTGCCATTCGCAAGAGCAAGAAGAACTTCTGCCA...TGCTTGGTGGAAAGTAAACAGAGAGGATGGAGGTTTGGGGCGAATGTCCTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CAA 90 bp GCTGGCAAGTTAGAGATTTGTAGGGCAGGCCGGCAGGCTGGAAGTTCTGGCAGGCACTATCTGCTCAAATaGAATGAGAATTCCAGAAAG +
Preference number: 5 (lower is better)
Translates to: AGKLEICRAGRQAGSSGRHYLLK*NENSRK
Trigger: CTTTCTGGAATTCTCATTCAATTTGAGCAGATAGTG...CCTGCCAGAACTTCCAGCCTGCCGGCCTGCCCTACAAATCTCTAACTTGCCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394363.6
CDS-3UTR CAA 90 bp GCACGAATGGGCTGCTGTGGAACCCTGTTTCCAGTTGTCAAGACAGACTTGGCAGACTTTGCCTTGTTCTaGCTTGAGCAGTTCTACTTC +
Preference number: 5 (lower is better)
Translates to: ARMGCCGTLFPVVKTDLADFALF*LEQFYF
Trigger: GAAGTAGAACTGCTCAAGCAAGAACAAGGCAAAGTC...TGCCAAGTCTGTCTTGACAACTGGAAACAGGGTTCCACAGCAGCCCATTCGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CAA 90 bp TGCCTCAGGACATTCGCCCCAAACCTCCATCCTCTCTGTTTACTTTCCACCAAGTCTGTGGACTTTGCCTaGTTCTTGCTTGAGCAGTTC +
Preference number: 5 (lower is better)
Translates to: CLRTFAPNLHPLCLLSTKSVDFA*FLLEQF
Trigger: GAACTGCTCAAGCAAGAACAAGGCAAAGTCCACAGA...CTTGGTGGAAAGTAAACAGAGAGGATGGAGGTTTGGGGCGAATGTCCTGAGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CAA 90 bp TGCCTCAGGACATTCGCCCCAAACCTCCATCCTCTCTGTTTACTTTCCACCAAGTCTTCTCTGTGGACTTaGCCTTGTTCTTGCTTGAGC +
Preference number: 5 (lower is better)
Translates to: CLRTFAPNLHPLCLLSTKSSLWT*PCSCLS
Trigger: GCTCAAGCAAGAACAAGGCAAAGTCCACAGAGAAGA...CTTGGTGGAAAGTAAACAGAGAGGATGGAGGTTTGGGGCGAATGTCCTGAGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CAA 90 bp GTTTCTGAATGGTCCACTCACATGCTGCCATTGCGATTTGCCGATGGGCACTACTCTTCTCTGTGGACTTaGCCTTGTTCTTGCTTGAGC +
Preference number: 5 (lower is better)
Translates to: VSEWSTHMLPLRFADGHYSSLWT*PCSCLS
Trigger: GCTCAAGCAAGAACAAGGCAAAGTCCACAGAGAAGA...GTAGTGCCCATCGGCAAATCGCAATGGCAGCATGTGAGTGGACCATTCAGAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CAA 90 bp GTTTCTGAATGGTCCACTCACATGCTGCCATTGCGATTTGCCGATGGGCACTACCTGGTCTACTGGGGATaGGAAAGACAATGGCAGTTA +
Preference number: 5 (lower is better)
Translates to: VSEWSTHMLPLRFADGHYLVYWG*ERQWQL
Trigger: TAACTGCCATTGTCTTTCCAATCCCCAGTAGACCAG...GTAGTGCCCATCGGCAAATCGCAATGGCAGCATGTGAGTGGACCATTCAGAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CAA 90 bp GTTTCTGAATGGTCCACTCACATGCTGCCATTGCGATTTGCCGATGGGCACTACAAGCCTTCCGTAGCATaGATGAGAGATGCATCAGTG +
Preference number: 5 (lower is better)
Translates to: VSEWSTHMLPLRFADGHYKPSVA*MRDASV
Trigger: CACTGATGCATCTCTCATCAATGCTACGGAAGGCTT...GTAGTGCCCATCGGCAAATCGCAATGGCAGCATGTGAGTGGACCATTCAGAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CAA 90 bp ACCACCACCACACACAATAAAGACCATCTCTGCCTCAGGACATTCGCCCCAAACCAAAGTCAGGTAAAATaGGTTGTCCGGCAATTCCCA +
Preference number: 5 (lower is better)
Translates to: TTTTHNKDHLCLRTFAPNQSQVK*VVRQFP
Trigger: TGGGAATTGCCGGACAACCAATTTTACCTGACTTTG...GTTTGGGGCGAATGTCCTGAGGCAGAGATGGTCTTTATTGTGTGTGGTGGTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CAA 90 bp CCTCAGGACATTCGCCCCAAACCTCCATCCTCTCTGTTTACTTTCCACCAAGCACCAAACCAGGCATCATaGGAGTTATTGGTGGAATTC +
Preference number: 5 (lower is better)
Translates to: PQDIRPKPPSSLFTFHQAPNQAS*ELLVEF
Trigger: GAATTCCACCAATAACTCCAATGATGCCTGGTTTGG...TGCTTGGTGGAAAGTAAACAGAGAGGATGGAGGTTTGGGGCGAATGTCCTGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CAA 90 bp GGGCTGCTGTGGAACCCTGTTTCCAGTTGTCAAGACAGACTTGGCATCTTTTTCGCATATCTGGAGGAATaGGTGGAGGTACTATTCCCA +
Preference number: 5 (lower is better)
Translates to: GLLWNPVSSCQDRLGIFFAYLEE*VEVLFP
Trigger: TGGGAATAGTACCTCCACCAATTCCTCCAGATATGC...GAAAAAGATGCCAAGTCTGTCTTGACAACTGGAAACAGGGTTCCACAGCAGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CAA 90 bp GTTTCTGAATGGTCCACTCACATGCTGCCATTGCGATTTGCCGATGGGCACTACCCCACAAATACTGTTTaGCATCCTGGTGGTCTTTCT +
Preference number: 5 (lower is better)
Translates to: VSEWSTHMLPLRFADGHYPTNTV*HPGGLS
Trigger: AGAAAGACCACCAGGATGCAAAACAGTATTTGTGGG...GTAGTGCCCATCGGCAAATCGCAATGGCAGCATGTGAGTGGACCATTCAGAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CAA 90 bp GCACGAATGGGCTGCTGTGGAACCCTGTTTCCAGTTGTCAAGACAGACTTGGCAAACTTCCACAATGATTaGCTCTGTCCCATTTTCAGG +
Preference number: 5 (lower is better)
Translates to: ARMGCCGTLFPVVKTDLANFHND*LCPIFR
Trigger: CCTGAAAATGGGACAGAGCAAATCATTGTGGAAGTT...TGCCAAGTCTGTCTTGACAACTGGAAACAGGGTTCCACAGCAGCCCATTCGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CAA 90 bp GTTTTCAGCACGAATGGGCTGCTGTGGAACCCTGTTTCCAGTTGTCAAGACAGATCTTCTCTGTGGACTTaGCCTTGTTCTTGCTTGAGC +
Preference number: 5 (lower is better)
Translates to: VFSTNGLLWNPVSSCQDRSSLWT*PCSCLS
Trigger: GCTCAAGCAAGAACAAGGCAAAGTCCACAGAGAAGA...TCTGTCTTGACAACTGGAAACAGGGTTCCACAGCAGCCCATTCGTGCTGAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CAA 90 bp GTTTCTGAATGGTCCACTCACATGCTGCCATTGCGATTTGCCGATGGGCACTACTTCAGCTGCTGTTCTTaGTTAGGGTCATCTTCTCTG +
Preference number: 5 (lower is better)
Translates to: VSEWSTHMLPLRFADGHYFSCCS*LGSSSL
Trigger: CAGAGAAGATGACCCTAACAAAGAACAGCAGCTGAA...GTAGTGCCCATCGGCAAATCGCAATGGCAGCATGTGAGTGGACCATTCAGAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CAA 90 bp AAGCCACAAACCATGCTTTGTCGTTTAAAAGGTGAACCTGGTCAGGCACCTTCTCATTCCTTGCAGGGCTaGTTGCAGGAGTTTCAGCTG +
Preference number: 5 (lower is better)
Translates to: KPQTMLCRLKGEPGQAPSHSLQG*LQEFQL
Trigger: CAGCTGAAACTCCTGCAACAAGCCCTGCAAGGAATG...AGAAGGTGCCTGACCAGGTTCACCTTTTAAACGACAAAGCATGGTTTGTGGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CAA 90 bp GGGCTGCTGTGGAACCCTGTTTCCAGTTGTCAAGACAGACTTGGCATCTTTTTCCTGGTCTACTGGGGATaGGAAAGACAATGGCAGTTA +
Preference number: 5 (lower is better)
Translates to: GLLWNPVSSCQDRLGIFFLVYWG*ERQWQL
Trigger: TAACTGCCATTGTCTTTCCAATCCCCAGTAGACCAG...GAAAAAGATGCCAAGTCTGTCTTGACAACTGGAAACAGGGTTCCACAGCAGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CAA 90 bp CAGGGGGAAGCCAGTTTTCAGCACGAATGGGCTGCTGTGGAACCCTGTTTCCAGAGTCATACTGGATACTaGCTTTCTGTAAACACATCT +
Preference number: 5 (lower is better)
Translates to: QGEASFQHEWAAVEPCFQSHTGY*LSVNTS
Trigger: AGATGTGTTTACAGAAAGCAAGTATCCAGTATGACT...CTGGAAACAGGGTTCCACAGCAGCCCATTCGTGCTGAAAACTGGCTTCCCCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CAA 90 bp GTTTCTGAATGGTCCACTCACATGCTGCCATTGCGATTTGCCGATGGGCACTACGTGAAATACTCTCCATaGGCTTTGCTTGCTCAGTAC +
Preference number: 5 (lower is better)
Translates to: VSEWSTHMLPLRFADGHYVKYSP*ALLAQY
Trigger: GTACTGAGCAAGCAAAGCCAATGGAGAGTATTTCAC...GTAGTGCCCATCGGCAAATCGCAATGGCAGCATGTGAGTGGACCATTCAGAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CAA 90 bp CCTCAGGACATTCGCCCCAAACCTCCATCCTCTCTGTTTACTTTCCACCAAGCATGTGTTCTCCAAGAATaGATCTCAAATCAGGTTCCC +
Preference number: 5 (lower is better)
Translates to: PQDIRPKPPSSLFTFHQACVLQE*ISNQVP
Trigger: GGGAACCTGATTTGAGATCAATTCTTGGAGAACACA...TGCTTGGTGGAAAGTAAACAGAGAGGATGGAGGTTTGGGGCGAATGTCCTGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CAA 90 bp CCTCAGGACATTCGCCCCAAACCTCCATCCTCTCTGTTTACTTTCCACCAAGCAGTTCTCTTTCTTTTCTaGCTTGATTCCCCTCCATTC +
Preference number: 5 (lower is better)
Translates to: PQDIRPKPPSSLFTFHQAVLFLF*LDSPPF
Trigger: GAATGGAGGGGAATCAAGCAAGAAAAGAAAGAGAAC...TGCTTGGTGGAAAGTAAACAGAGAGGATGGAGGTTTGGGGCGAATGTCCTGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394363.6
CDS-3UTR CAA 90 bp ACATGCTGCCATTGCGATTTGCCGATGGGCACTACCAAGGTGTCTCTGGCAATTCCATCTAAAATCTCTTaGCATTGTGTGGTCCTCAAC +
Preference number: 5 (lower is better)
Translates to: TCCHCDLPMGTTKVSLAIPSKIS*HCVVLN
Trigger: GTTGAGGACCACACAATGCAAAGAGATTTTAGATGG...AATTGCCAGAGACACCTTGGTAGTGCCCATCGGCAAATCGCAATGGCAGCATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370927.5
CDS-3UTR CAA 90 bp GTTTTCAGCACGAATGGGCTGCTGTGGAACCCTGTTTCCAGTTGTCAAGACAGATTCCAAGATTATTCATaGCTGTGGCCCATGCAGTTG +
Preference number: 5 (lower is better)
Translates to: VFSTNGLLWNPVSSCQDRFQDYS*LWPMQL
Trigger: CAACTGCATGGGCCACAGCAATGAATAATCTTGGAA...TCTGTCTTGACAACTGGAAACAGGGTTCCACAGCAGCCCATTCGTGCTGAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CAA 90 bp AGTCCAAAGGCAGTCTCGAAGCAGAATTCCCTCCTCAGGGGACTTCAGTCTTTTCAAAGTCAGGTAAAATaGGTTGTCCGGCAATTCCCA +
Preference number: 5 (lower is better)
Translates to: SPKAVSKQNSLLRGLQSFQSQVK*VVRQFP
Trigger: TGGGAATTGCCGGACAACCAATTTTACCTGACTTTG...AAAAGACTGAAGTCCCCTGAGGAGGGAATTCTGCTTCGAGACTGCCTTTGGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394363.6
CDS-3UTR CAA 90 bp CCTCAGGACATTCGCCCCAAACCTCCATCCTCTCTGTTTACTTTCCACCAAGCAGCATCATTGGAGTTATaGGTGGAATTCCAGTCATCA +
Preference number: 5 (lower is better)
Translates to: PQDIRPKPPSSLFTFHQAASLEL*VEFQSS
Trigger: TGATGACTGGAATTCCACCAATAACTCCAATGATGC...TGCTTGGTGGAAAGTAAACAGAGAGGATGGAGGTTTGGGGCGAATGTCCTGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CAA 90 bp AGTCCAAAGGCAGTCTCGAAGCAGAATTCCCTCCTCAGGGGACTTCAGTCTTTTCCAAACCAGGCATCATaGGAGTTATTGGTGGAATTC +
Preference number: 5 (lower is better)
Translates to: SPKAVSKQNSLLRGLQSFPNQAS*ELLVEF
Trigger: GAATTCCACCAATAACTCCAATGATGCCTGGTTTGG...AAAAGACTGAAGTCCCCTGAGGAGGGAATTCTGCTTCGAGACTGCCTTTGGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394363.6
CDS-3UTR CAA 90 bp GGCTGCTGTGGAACCCTGTTTCCAGTTGTCAAGACAGACTTGGCATCTTTTTCCCCCACAAATACTGTTTaGCATCCTGGTGGTCTTTCT +
Preference number: 5 (lower is better)
Translates to: GCCGTLFPVVKTDLASFSPTNTV*HPGGLS
Trigger: AGAAAGACCACCAGGATGCAAAACAGTATTTGTGGG...GGAAAAAGATGCCAAGTCTGTCTTGACAACTGGAAACAGGGTTCCACAGCAGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CAA 90 bp TGCCTCAGGACATTCGCCCCAAACCTCCATCCTCTCTGTTTACTTTCCACCAAGAACTTCCACAATGATTaGCTCTGTCCCATTTTCAGG +
Preference number: 5 (lower is better)
Translates to: CLRTFAPNLHPLCLLSTKNFHND*LCPIFR
Trigger: CCTGAAAATGGGACAGAGCAAATCATTGTGGAAGTT...CTTGGTGGAAAGTAAACAGAGAGGATGGAGGTTTGGGGCGAATGTCCTGAGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CAA 90 bp TGCCTCAGGACATTCGCCCCAAACCTCCATCCTCTCTGTTTACTTTCCACCAAGAAGTTCTTCTTGCTCTaGCGAATGGCAATGATCTCT +
Preference number: 5 (lower is better)
Translates to: CLRTFAPNLHPLCLLSTKKFFLL*RMAMIS
Trigger: AGAGATCATTGCCATTCGCAAGAGCAAGAAGAACTT...CTTGGTGGAAAGTAAACAGAGAGGATGGAGGTTTGGGGCGAATGTCCTGAGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CAA 90 bp CAAGCAGAAGTTTCTGAATGGTCCACTCACATGCTGCCATTGCGATTTGCCGATATTTCCTCAGCTTGTTaGCACCACACGCTGATGTTC +
Preference number: 5 (lower is better)
Translates to: QAEVSEWSTHMLPLRFADISSAC*HHTLMF
Trigger: GAACATCAGCGTGTGGTGCAAACAAGCTGAGGAAAT...ATCGGCAAATCGCAATGGCAGCATGTGAGTGGACCATTCAGAAACTTCTGCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CAA 90 bp AAGCCACAAACCATGCTTTGTCGTTTAAAAGGTGAACCTGGTCAGGCACCTTCTGCGAATTTCCTCAGCTaGTTTGCACCACACGCTGAT +
Preference number: 5 (lower is better)
Translates to: KPQTMLCRLKGEPGQAPSANFLS*FAPHAD
Trigger: ATCAGCGTGTGGTGCAAACAAGCTGAGGAAATTCGC...AGAAGGTGCCTGACCAGGTTCACCTTTTAAACGACAAAGCATGGTTTGTGGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CAA 90 bp GTTTTCAGCACGAATGGGCTGCTGTGGAACCCTGTTTCCAGTTGTCAAGACAGAGCTTCACGTTCAGATTaGATAGGACTGCTGTTCATG +
Preference number: 5 (lower is better)
Translates to: VFSTNGLLWNPVSSCQDRASRSD*IGLLFM
Trigger: CATGAACAGCAGTCCTATCAAATCTGAACGTGAAGC...TCTGTCTTGACAACTGGAAACAGGGTTCCACAGCAGCCCATTCGTGCTGAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CAA 90 bp AATATTAATATAAATCCCTTCTGCCACTGTGTGCGTGCGTGTGTGTGTTTGTGCACTCACATGCTGCCATaGCGATTTGCCGATGGGCAC +
Preference number: 5 (lower is better)
Translates to: NININPFCHCVRACVCLCTHMLP*RFADGH
Trigger: GTGCCCATCGGCAAATCGCAATGGCAGCATGTGAGT...GCACAAACACACACACGCACGCACACAGTGGCAGAAGGGATTTATATTAATATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CAA 90 bp GGGCTGCTGTGGAACCCTGTTTCCAGTTGTCAAGACAGACTTGGCATCTTTTTCGTGAAATACTCTCCATaGGCTTTGCTTGCTCAGTAC +
Preference number: 5 (lower is better)
Translates to: GLLWNPVSSCQDRLGIFFVKYSP*ALLAQY
Trigger: GTACTGAGCAAGCAAAGCCAATGGAGAGTATTTCAC...GAAAAAGATGCCAAGTCTGTCTTGACAACTGGAAACAGGGTTCCACAGCAGCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CAA 90 bp CCCGAGACTGATGAATCAAAGCCTTCCGTAGCATTGATGAGAGATGCATCAGTGGAACCCTGTTTCCAGTaGTCAAGACAGACTTGGCAT +
Preference number: 5 (lower is better)
Translates to: PETDESKPSVALMRDASVEPCFQ*SRQTWH
Trigger: ATGCCAAGTCTGTCTTGACAACTGGAAACAGGGTTC...CACTGATGCATCTCTCATCAATGCTACGGAAGGCTTTGATTCATCAGTCTCGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS GCA 90 bp TCTTGGACTTTGAGTAGATGCTGTTGCATTCCTTGCAGGGCTTGTTaGAGGAGTTTCAGCTGCTGTTCTTTGTTAGGGTCATCTTCTCTG +
Preference number: 5 (lower is better)
Translates to: SWTLSRCCCIPCRAC*RSFSCCSLLGSSSL
Trigger: CAGAGAAGATGACCCTAACAAAGAACAGCAGCTGAAACTCCTGCAACAAGCCCTGCAAGGAATGCAACAGCATCTACTCAAAGTCCAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338144.8
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CAA 90 bp GTTTTCAGCACGAATGGGCTGCTGTGGAACCCTGTTTCCAGTTGTCAAGACAGAAAGTTCTTCTTGCTCTaGCGAATGGCAATGATCTCT +
Preference number: 5 (lower is better)
Translates to: VFSTNGLLWNPVSSCQDRKFFLL*RMAMIS
Trigger: AGAGATCATTGCCATTCGCAAGAGCAAGAAGAACTT...TCTGTCTTGACAACTGGAAACAGGGTTCCACAGCAGCCCATTCGTGCTGAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CAA 90 bp AAGCCACAAACCATGCTTTGTCGTTTAAAAGGTGAACCTGGTCAGGCACCTTCTTGGCAGAAGTTCTTCTaGCTCTTGCGAATGGCAATG +
Preference number: 5 (lower is better)
Translates to: KPQTMLCRLKGEPGQAPSWQKFF*LLRMAM
Trigger: CATTGCCATTCGCAAGAGCAAGAAGAACTTCTGCCA...AGAAGGTGCCTGACCAGGTTCACCTTTTAAACGACAAAGCATGGTTTGTGGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CAA 90 bp AATATTAATATAAATCCCTTCTGCCACTGTGTGCGTGCGTGTGTGTGTTTGTGCCATTCCTTGCAGGGCTaGTTGCAGGAGTTTCAGCTG +
Preference number: 5 (lower is better)
Translates to: NININPFCHCVRACVCLCHSLQG*LQEFQL
Trigger: CAGCTGAAACTCCTGCAACAAGCCCTGCAAGGAATG...GCACAAACACACACACGCACGCACACAGTGGCAGAAGGGATTTATATTAATATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CAA 90 bp AATATTAATATAAATCCCTTCTGCCACTGTGTGCGTGCGTGTGTGTGTTTGTGCATGCTGTTGCATTCCTaGCAGGGCTTGTTGCAGGAG +
Preference number: 5 (lower is better)
Translates to: NININPFCHCVRACVCLCMLLHS*QGLLQE
Trigger: CTCCTGCAACAAGCCCTGCAAGGAATGCAACAGCAT...GCACAAACACACACACGCACGCACACAGTGGCAGAAGGGATTTATATTAATATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CAA 90 bp ACCACCACCACACACAATAAAGACCATCTCTGCCTCAGGACATTCGCCCCAAACTTTAAAGACAACCAATaGACAGAAAGGGGAGGAAGT +
Preference number: 5 (lower is better)
Translates to: TTTTHNKDHLCLRTFAPNFKDNQ*TERGGS
Trigger: ACTTCCTCCCCTTTCTGTCAATTGGTTGTCTTTAAA...GTTTGGGGCGAATGTCCTGAGGCAGAGATGGTCTTTATTGTGTGTGGTGGTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CAA 90 bp CCTCAGGACATTCGCCCCAAACCTCCATCCTCTCTGTTTACTTTCCACCAAGCACAAGGGAGGGTATGCTaGCATTATTATAAATACCAC +
Preference number: 5 (lower is better)
Translates to: PQDIRPKPPSSLFTFHQAQGRVC*HYYKYH
Trigger: GTGGTATTTATAATAATGCAAGCATACCCTCCCTTG...TGCTTGGTGGAAAGTAAACAGAGAGGATGGAGGTTTGGGGCGAATGTCCTGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CAA 90 bp GCACGAATGGGCTGCTGTGGAACCCTGTTTCCAGTTGTCAAGACAGACTTGGCATTCTTTTATCTTCAATaGAGACTCAAGGGAGGGTAT +
Preference number: 5 (lower is better)
Translates to: ARMGCCGTLFPVVKTDLAFFYLQ*RLKGGY
Trigger: ATACCCTCCCTTGAGTCTCAATTGAAGATAAAAGAA...TGCCAAGTCTGTCTTGACAACTGGAAACAGGGTTCCACAGCAGCCCATTCGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CAA 90 bp ACCACCACCACACACAATAAAGACCATCTCTGCCTCAGGACATTCGCCCCAAACCTCCATTGGCTTTGCTaGCTCAGTACATTCTTTTAT +
Preference number: 5 (lower is better)
Translates to: TTTTHNKDHLCLRTFAPNLHWLC*LSTFFY
Trigger: ATAAAAGAATGTACTGAGCAAGCAAAGCCAATGGAG...GTTTGGGGCGAATGTCCTGAGGCAGAGATGGTCTTTATTGTGTGTGGTGGTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CAA 90 bp GTTTCTGAATGGTCCACTCACATGCTGCCATTGCGATTTGCCGATGGGCACTACCTCCATTGGCTTTGCTaGCTCAGTACATTCTTTTAT +
Preference number: 5 (lower is better)
Translates to: VSEWSTHMLPLRFADGHYLHWLC*LSTFFY
Trigger: ATAAAAGAATGTACTGAGCAAGCAAAGCCAATGGAG...GTAGTGCCCATCGGCAAATCGCAATGGCAGCATGTGAGTGGACCATTCAGAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CAA 90 bp TGCCTCAGGACATTCGCCCCAAACCTCCATCCTCTCTGTTTACTTTCCACCAAGGTTGTCAAGACAGACTaGGCATCTTTTTCCAACATT +
Preference number: 5 (lower is better)
Translates to: CLRTFAPNLHPLCLLSTKVVKTD*ASFSNI
Trigger: AATGTTGGAAAAAGATGCCAAGTCTGTCTTGACAAC...CTTGGTGGAAAGTAAACAGAGAGGATGGAGGTTTGGGGCGAATGTCCTGAGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS CCA 90 bp ATAGGACTGCTGTTCATGGTCTTCTCAAGAGGGTATTCGCTATCCTaGTTTGAGGCACACAGCCTAGAAGCACAGCTTTCCTTTTCTTTA +
Preference number: 5 (lower is better)
Translates to: IGLLFMVFSRGYSLS*FEAHSLEAQLSFSL
Trigger: TAAAGAAAAGGAAAGCTGTGCTTCTAGGCTGTGTGCCTCAAACCAGGATAGCGAATACCCTCTTGAGAAGACCATGAACAGCAGTCCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338144.8
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CAA 90 bp AAGCCACAAACCATGCTTTGTCGTTTAAAAGGTGAACCTGGTCAGGCACCTTCTCAAAGTCAGGTAAAATaGGTTGTCCGGCAATTCCCA +
Preference number: 5 (lower is better)
Translates to: KPQTMLCRLKGEPGQAPSQSQVK*VVRQFP
Trigger: TGGGAATTGCCGGACAACCAATTTTACCTGACTTTG...AGAAGGTGCCTGACCAGGTTCACCTTTTAAACGACAAAGCATGGTTTGTGGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CAA 90 bp CCCGAGACTGATGAATCAAAGCCTTCCGTAGCATTGATGAGAGATGCATCAGTGAAGTTCTTCTTGCTCTaGCGAATGGCAATGATCTCT +
Preference number: 5 (lower is better)
Translates to: PETDESKPSVALMRDASVKFFLL*RMAMIS
Trigger: AGAGATCATTGCCATTCGCAAGAGCAAGAAGAACTT...CACTGATGCATCTCTCATCAATGCTACGGAAGGCTTTGATTCATCAGTCTCGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CAA 90 bp AATATTAATATAAATCCCTTCTGCCACTGTGTGCGTGCGTGTGTGTGTTTGTGCGACAGATACAGGGCTTaGTCCACCATGTACTCCTCA +
Preference number: 5 (lower is better)
Translates to: NININPFCHCVRACVCLCDRYRA*STMYSS
Trigger: TGAGGAGTACATGGTGGACAAAGCCCTGTATCTGTC...GCACAAACACACACACGCACGCACACAGTGGCAGAAGGGATTTATATTAATATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CAA 90 bp AAGCCACAAACCATGCTTTGTCGTTTAAAAGGTGAACCTGGTCAGGCACCTTCTGACTTTGCCTTGTTCTaGCTTGAGCAGTTCTACTTC +
Preference number: 5 (lower is better)
Translates to: KPQTMLCRLKGEPGQAPSDFALF*LEQFYF
Trigger: GAAGTAGAACTGCTCAAGCAAGAACAAGGCAAAGTC...AGAAGGTGCCTGACCAGGTTCACCTTTTAAACGACAAAGCATGGTTTGTGGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CAA 90 bp GGGCTGCTGTGGAACCCTGTTTCCAGTTGTCAAGACAGACTTGGCATCTTTTTCTTTAAAGACAACCAATaGACAGAAAGGGGAGGAAGT +
Preference number: 5 (lower is better)
Translates to: GLLWNPVSSCQDRLGIFFFKDNQ*TERGGS
Trigger: ACTTCCTCCCCTTTCTGTCAATTGGTTGTCTTTAAA...GAAAAAGATGCCAAGTCTGTCTTGACAACTGGAAACAGGGTTCCACAGCAGCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CAA 90 bp AGTCCAAAGGCAGTCTCGAAGCAGAATTCCCTCCTCAGGGGACTTCAGTCTTTTTTTAAAGACAACCAATaGACAGAAAGGGGAGGAAGT +
Preference number: 5 (lower is better)
Translates to: SPKAVSKQNSLLRGLQSFFKDNQ*TERGGS
Trigger: ACTTCCTCCCCTTTCTGTCAATTGGTTGTCTTTAAA...AAAAGACTGAAGTCCCCTGAGGAGGGAATTCTGCTTCGAGACTGCCTTTGGACT
46% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000394363.6
CDS-3UTR CAA 90 bp ACATGCTGCCATTGCGATTTGCCGATGGGCACTACCAAGGTGTCTCTGGCAATTAGTCATACTGGATACTaGCTTTCTGTAAACACATCT +
Preference number: 5 (lower is better)
Translates to: TCCHCDLPMGTTKVSLAISHTGY*LSVNTS
Trigger: AGATGTGTTTACAGAAAGCAAGTATCCAGTATGACT...AATTGCCAGAGACACCTTGGTAGTGCCCATCGGCAAATCGCAATGGCAGCATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CAA 90 bp GTTTCTGAATGGTCCACTCACATGCTGCCATTGCGATTTGCCGATGGGCACTACTTCTTTTATCTTCAATaGAGACTCAAGGGAGGGTAT +
Preference number: 5 (lower is better)
Translates to: VSEWSTHMLPLRFADGHYFFYLQ*RLKGGY
Trigger: ATACCCTCCCTTGAGTCTCAATTGAAGATAAAAGAA...GTAGTGCCCATCGGCAAATCGCAATGGCAGCATGTGAGTGGACCATTCAGAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CAA 90 bp GTTTTCAGCACGAATGGGCTGCTGTGGAACCCTGTTTCCAGTTGTCAAGACAGAGTTGTCAAGACAGACTaGGCATCTTTTTCCAACATT +
Preference number: 5 (lower is better)
Translates to: VFSTNGLLWNPVSSCQDRVVKTD*ASFSNI
Trigger: AATGTTGGAAAAAGATGCCAAGTCTGTCTTGACAAC...TCTGTCTTGACAACTGGAAACAGGGTTCCACAGCAGCCCATTCGTGCTGAAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CAA 90 bp GGCTGCTGTGGAACCCTGTTTCCAGTTGTCAAGACAGACTTGGCATCTTTTTCCTATAGCCTAGCCAAGTaGCCACACAAAATTAACCAT +
Preference number: 5 (lower is better)
Translates to: GCCGTLFPVVKTDLASFSYSLAK*PHKINH
Trigger: ATGGTTAATTTTGTGTGGCAACTTGGCTAGGCTATA...GGAAAAAGATGCCAAGTCTGTCTTGACAACTGGAAACAGGGTTCCACAGCAGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394363.6
CDS TCA 90 bp ACTGCTGTTCATGGTCTTCTCAAGAGGGTATTCGCTATCCTGGTTTaGGGCACACAGCCTAGAAGCACAGCTTTCCTTTTCTTTAAGATT +
Preference number: 5 (lower is better)
Translates to: TAVHGLLKRVFAILV*GTQPRSTAFLFFKI
Trigger: AATCTTAAAGAAAAGGAAAGCTGTGCTTCTAGGCTGTGTGCCTCAAACCAGGATAGCGAATACCCTCTTGAGAAGACCATGAACAGCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338144.8
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS CCA 90 bp CGTGCAGCTTTTACAGTGTATGATCTCTTTTACTACTGGCATATCTaGAGGAATTGGTGGAGGTACTATTCCCAAACCAGGCATCATTGG +
Preference number: 5 (lower is better)
Translates to: RAAFTVYDLFYYWHI*RNWWRYYSQTRHHW
Trigger: CCAATGATGCCTGGTTTGGGAATAGTACCTCCACCAATTCCTCCAGATATGCCAGTAGTAAAAGAGATCATACACTGTAAAAGCTGCACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000338144.8
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
ENST00000432489.5
ENST00000492263.1
CDS-3UTR CAA 90 bp TATCTTCAATTGAGACTCAAGGGAGGGTATGCTTGCATTATTATAAATACCACATGCAGGGGCTCGTTGTaGTTAGCAGGGTCAAAGGGC +
Preference number: 5 (lower is better)
Translates to: YLQLRLKGGYACIIINTTCRGSL*LAGSKG
Trigger: GCCCTTTGACCCTGCTAACAACAACGAGCCCCTGCA...TGTGGTATTTATAATAATGCAAGCATACCCTCCCTTGAGTCTCAATTGAAGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394363.6
CDS-3UTR CAA 90 bp CAAGCAGAAGTTTCTGAATGGTCCACTCACATGCTGCCATTGCGATTTGCCGATAGATGTATTCAATGCTaGCTCCAAATGGGTGAACAT +
Preference number: 5 (lower is better)
Translates to: QAEVSEWSTHMLPLRFADRCIQC*LQMGEH
Trigger: ATGTTCACCCATTTGGAGCAAGCATTGAATACATCT...ATCGGCAAATCGCAATGGCAGCATGTGAGTGGACCATTCAGAAACTTCTGCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CAA 90 bp CAAGCAGAAGTTTCTGAATGGTCCACTCACATGCTGCCATTGCGATTTGCCGATCAAGGGAGGGTATGCTaGCATTATTATAAATACCAC +
Preference number: 5 (lower is better)
Translates to: QAEVSEWSTHMLPLRFADQGRVC*HYYKYH
Trigger: GTGGTATTTATAATAATGCAAGCATACCCTCCCTTG...ATCGGCAAATCGCAATGGCAGCATGTGAGTGGACCATTCAGAAACTTCTGCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CAA 90 bp AATATTAATATAAATCCCTTCTGCCACTGTGTGCGTGCGTGTGTGTGTTTGTGCAAGCCTTCCGTAGCATaGATGAGAGATGCATCAGTG +
Preference number: 5 (lower is better)
Translates to: NININPFCHCVRACVCLCKPSVA*MRDASV
Trigger: CACTGATGCATCTCTCATCAATGCTACGGAAGGCTT...GCACAAACACACACACGCACGCACACAGTGGCAGAAGGGATTTATATTAATATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS GCA 90 bp AAATTGAATGAGAATTCCAGAAAGGGCCTGCTTGAACTTCTCCTTTaGTTCTTCCATATCTTTCTCATGGGCAGCTTTCTCGTTCACCAG +
Preference number: 5 (lower is better)
Translates to: KLNENSRKGLLELLL*FFHIFLMGSFLVHQ
Trigger: CTGGTGAACGAGAAAGCTGCCCATGAGAAAGATATGGAAGAAGCAAAGGAGAAGTTCAAGCAGGCCCTTTCTGGAATTCTCATTCAATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338144.8
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
ENST00000432489.5
CDS-3UTR CAA 90 bp AATATTAATATAAATCCCTTCTGCCACTGTGTGCGTGCGTGTGTGTGTTTGTGCCCAAACCAGGCATCATaGGAGTTATTGGTGGAATTC +
Preference number: 5 (lower is better)
Translates to: NININPFCHCVRACVCLCPNQAS*ELLVEF
Trigger: GAATTCCACCAATAACTCCAATGATGCCTGGTTTGG...GCACAAACACACACACGCACGCACACAGTGGCAGAAGGGATTTATATTAATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CAA 90 bp TATCTTCAATTGAGACTCAAGGGAGGGTATGCTTGCATTATTATAAATACCACAGTGGTCTTTCTCGGGTaGCAGGAGGTGGGAGATTTG +
Preference number: 5 (lower is better)
Translates to: YLQLRLKGGYACIIINTTVVFLG*QEVGDL
Trigger: CAAATCTCCCACCTCCTGCAACCCGAGAAAGACCAC...TGTGGTATTTATAATAATGCAAGCATACCCTCCCTTGAGTCTCAATTGAAGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CAA 90 bp CAAGCAGAAGTTTCTGAATGGTCCACTCACATGCTGCCATTGCGATTTGCCGATCACTATCTGCTCAAATaGAATGAGAATTCCAGAAAG +
Preference number: 5 (lower is better)
Translates to: QAEVSEWSTHMLPLRFADHYLLK*NENSRK
Trigger: CTTTCTGGAATTCTCATTCAATTTGAGCAGATAGTG...ATCGGCAAATCGCAATGGCAGCATGTGAGTGGACCATTCAGAAACTTCTGCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CAA 90 bp AATATTAATATAAATCCCTTCTGCCACTGTGTGCGTGCGTGTGTGTGTTTGTGCTTCAGCTGCTGTTCTTaGTTAGGGTCATCTTCTCTG +
Preference number: 5 (lower is better)
Translates to: NININPFCHCVRACVCLCFSCCS*LGSSSL
Trigger: CAGAGAAGATGACCCTAACAAAGAACAGCAGCTGAA...GCACAAACACACACACGCACGCACACAGTGGCAGAAGGGATTTATATTAATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CAA 90 bp CAAGCAGAAGTTTCTGAATGGTCCACTCACATGCTGCCATTGCGATTTGCCGATAGTCATACTGGATACTaGCTTTCTGTAAACACATCT +
Preference number: 5 (lower is better)
Translates to: QAEVSEWSTHMLPLRFADSHTGY*LSVNTS
Trigger: AGATGTGTTTACAGAAAGCAAGTATCCAGTATGACT...ATCGGCAAATCGCAATGGCAGCATGTGAGTGGACCATTCAGAAACTTCTGCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CAA 90 bp AAGCCACAAACCATGCTTTGTCGTTTAAAAGGTGAACCTGGTCAGGCACCTTCTCAAGGGAGGGTATGCTaGCATTATTATAAATACCAC +
Preference number: 5 (lower is better)
Translates to: KPQTMLCRLKGEPGQAPSQGRVC*HYYKYH
Trigger: GTGGTATTTATAATAATGCAAGCATACCCTCCCTTG...AGAAGGTGCCTGACCAGGTTCACCTTTTAAACGACAAAGCATGGTTTGTGGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CAA 90 bp AAGCCACAAACCATGCTTTGTCGTTTAAAAGGTGAACCTGGTCAGGCACCTTCTCACTATCTGCTCAAATaGAATGAGAATTCCAGAAAG +
Preference number: 5 (lower is better)
Translates to: KPQTMLCRLKGEPGQAPSHYLLK*NENSRK
Trigger: CTTTCTGGAATTCTCATTCAATTTGAGCAGATAGTG...AGAAGGTGCCTGACCAGGTTCACCTTTTAAACGACAAAGCATGGTTTGTGGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CAA 90 bp ATAGTATTTACAGCAGTACTCGGTTTGCAATTCAACACACTGACAACAGAAGCATCTGTGGACTTTGCCTaGTTCTTGCTTGAGCAGTTC +
Preference number: 5 (lower is better)
Translates to: IVFTAVLGLQFNTLTTEASVDFA*FLLEQF
Trigger: GAACTGCTCAAGCAAGAACAAGGCAAAGTCCACAGA...TGCTTCTGTTGTCAGTGTGTTGAATTGCAAACCGAGTACTGCTGTAAATACTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CAA 90 bp ATAGTATTTACAGCAGTACTCGGTTTGCAATTCAACACACTGACAACAGAAGCATTAAGGAATTGGCTCTaGCAATTATGGGGGCTGGCA +
Preference number: 5 (lower is better)
Translates to: IVFTAVLGLQFNTLTTEALRNWL*QLWGLA
Trigger: TGCCAGCCCCCATAATTGCAAGAGCCAATTCCTTAA...TGCTTCTGTTGTCAGTGTGTTGAATTGCAAACCGAGTACTGCTGTAAATACTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394363.6
CDS-3UTR CAA 90 bp ATAGTATTTACAGCAGTACTCGGTTTGCAATTCAACACACTGACAACAGAAGCAGTGAAATACTCTCCATaGGCTTTGCTTGCTCAGTAC +
Preference number: 5 (lower is better)
Translates to: IVFTAVLGLQFNTLTTEAVKYSP*ALLAQY
Trigger: GTACTGAGCAAGCAAAGCCAATGGAGAGTATTTCAC...TGCTTCTGTTGTCAGTGTGTTGAATTGCAAACCGAGTACTGCTGTAAATACTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CAA 90 bp AATATTAATATAAATCCCTTCTGCCACTGTGTGCGTGCGTGTGTGTGTTTGTGCGTTGTCAAGACAGACTaGGCATCTTTTTCCAACATT +
Preference number: 5 (lower is better)
Translates to: NININPFCHCVRACVCLCVVKTD*ASFSNI
Trigger: AATGTTGGAAAAAGATGCCAAGTCTGTCTTGACAAC...GCACAAACACACACACGCACGCACACAGTGGCAGAAGGGATTTATATTAATATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CAA 90 bp AGATCTATTTATTTTAAGGAATTGGCTCTTGCAATTATGGGGGCTGGCAAGTTAGCTTCACGTTCAGATTaGATAGGACTGCTGTTCATG +
Preference number: 5 (lower is better)
Translates to: RSIYFKELALAIMGAGKLASRSD*IGLLFM
Trigger: CATGAACAGCAGTCCTATCAAATCTGAACGTGAAGC...TAACTTGCCAGCCCCCATAATTGCAAGAGCCAATTCCTTAAAATAAATAGATCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394363.6
CDS-3UTR CAA 90 bp TATCTTCAATTGAGACTCAAGGGAGGGTATGCTTGCATTATTATAAATACCACAGAACCCTGTTTCCAGTaGTCAAGACAGACTTGGCAT +
Preference number: 5 (lower is better)
Translates to: YLQLRLKGGYACIIINTTEPCFQ*SRQTWH
Trigger: ATGCCAAGTCTGTCTTGACAACTGGAAACAGGGTTC...TGTGGTATTTATAATAATGCAAGCATACCCTCCCTTGAGTCTCAATTGAAGATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CAA 90 bp AGAGATCTATTTATTTTAAGGAATTGGCTCTTGCAATTATGGGGGCTGGCAAGTAGATGTATTCAATGCTaGCTCCAAATGGGTGAACAT +
Preference number: 5 (lower is better)
Translates to: RDLFILRNWLLQLWGLASRCIQC*LQMGEH
Trigger: ATGTTCACCCATTTGGAGCAAGCATTGAATACATCT...ACTTGCCAGCCCCCATAATTGCAAGAGCCAATTCCTTAAAATAAATAGATCTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394363.6
CDS-3UTR CAA 90 bp AGATCTATTTATTTTAAGGAATTGGCTCTTGCAATTATGGGGGCTGGCAAGTTACTCCATTGGCTTTGCTaGCTCAGTACATTCTTTTAT +
Preference number: 5 (lower is better)
Translates to: RSIYFKELALAIMGAGKLLHWLC*LSTFFY
Trigger: ATAAAAGAATGTACTGAGCAAGCAAAGCCAATGGAG...TAACTTGCCAGCCCCCATAATTGCAAGAGCCAATTCCTTAAAATAAATAGATCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394363.6
CDS-3UTR CAA 90 bp TATCTTCAATTGAGACTCAAGGGAGGGTATGCTTGCATTATTATAAATACCACAAGATGTATTCAATGCTaGCTCCAAATGGGTGAACAT +
Preference number: 5 (lower is better)
Translates to: YLQLRLKGGYACIIINTTRCIQC*LQMGEH
Trigger: ATGTTCACCCATTTGGAGCAAGCATTGAATACATCT...TGTGGTATTTATAATAATGCAAGCATACCCTCCCTTGAGTCTCAATTGAAGATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS-3UTR CAA 90 bp AGATCTATTTATTTTAAGGAATTGGCTCTTGCAATTATGGGGGCTGGCAAGTTATTCTTTTATCTTCAATaGAGACTCAAGGGAGGGTAT +
Preference number: 5 (lower is better)
Translates to: RSIYFKELALAIMGAGKLFFYLQ*RLKGGY
Trigger: ATACCCTCCCTTGAGTCTCAATTGAAGATAAAAGAA...TAACTTGCCAGCCCCCATAATTGCAAGAGCCAATTCCTTAAAATAAATAGATCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394363.6
CDS CCA 72 bp TACAGCCGCGGAAAATCGGGCCGGCGCGGCAGTTCCTaGGCTCGTAGTGCCCTCGCGGCGCCCCACGCCGCG +
Preference number: 6 (lower is better)
Translates to: YSRGKSGRRGSS*ARSALAAPHAA
Trigger: CGCGGCGTGGGGCGCCGCGAGGGCACTACGAGCCCAGGAACTGCCGCGCCGGCCCGATTTTCCGCGGCTGTA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000338144.8
ENST00000370935.5
ENST00000394363.6
ENST00000432489.5
ENST00000492263.1
CDS GCA 72 bp TCGCGGCGCCCCACGCCGCGCCACTCTCTTCCGAAATaGCCGCCTCGCGCTTCCAGGCCTAGACCCGGCACT +
Preference number: 6 (lower is better)
Translates to: SRRPTPRHSLPK*PPRASRPRPGT
Trigger: AGTGCCGGGTCTAGGCCTGGAAGCGCGAGGCGGGCATTTCGGAAGAGAGTGGCGCGGCGTGGGGCGCCGCGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338144.8
ENST00000370935.5
ENST00000394363.6
CDS GCA 72 bp CCTTCTGTGACCAGAGGGCCACTGGCACTACCAAACTaGAGGGGCTCGTTGTTGTTAGCAGGGTCAAAGGGC +
Preference number: 6 (lower is better)
Translates to: PSVTRGPLALPN*RGSLLLAGSKG
Trigger: GCCCTTTGACCCTGCTAACAACAACGAGCCCCTGCAGTTTGGTAGTGCCAGTGGCCCTCTGGTCACAGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338144.8
ENST00000394363.6
ENST00000432489.5
ENST00000492263.1
CDS CCA 72 bp CAGCTTTCTCGTTCACCAGGCGGCGGACATGGCTGTTaGCCGACTGGATCATGGAGTAGAAGTTATTGGCGC +
Preference number: 6 (lower is better)
Translates to: QLSRSPGGGHGC*PTGSWSRSYWR
Trigger: GCGCCAATAACTTCTACTCCATGATCCAGTCGGCCAACAGCCATGTCCGCCGCCTGGTGAACGAGAAAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338144.8
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
ENST00000432489.5
CDS CAA 72 bp GGGCCACTGGCACTACCAAACTGCAGGGGCTCGTTGTaGTTAGCAGGGTCAAAGGGCAGCTGGTTCAATCCA +
Preference number: 6 (lower is better)
Translates to: GPLALPNCRGSL*LAGSKGSWFNP
Trigger: TGGATTGAACCAGCTGCCCTTTGACCCTGCTAACAACAACGAGCCCCTGCAGTTTGGTAGTGCCAGTGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338144.8
ENST00000394363.6
ENST00000432489.5
ENST00000492263.1
CDS CAA 90 bp GTGACCAGAGGGCCACTGGCACTACCAAACTGCAGGGGCTCGTTGTaGTTAGCAGGGTCAAAGGGCAGCTGGTTCAATCCATCACACTTC +
Preference number: 6 (lower is better)
Translates to: VTRGPLALPNCRGSL*LAGSKGSWFNPSHF
Trigger: GAAGTGTGATGGATTGAACCAGCTGCCCTTTGACCCTGCTAACAACAACGAGCCCCTGCAGTTTGGTAGTGCCAGTGGCCCTCTGGTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338144.8
ENST00000394363.6
ENST00000432489.5
ENST00000492263.1
CDS CAA 90 bp TCTGTGACCAGAGGGCCACTGGCACTACCAAACTGCAGGGGCTCGTaGTTGTTAGCAGGGTCAAAGGGCAGCTGGTTCAATCCATCACAC +
Preference number: 6 (lower is better)
Translates to: SVTRGPLALPNCRGS*LLAGSKGSWFNPSH
Trigger: GTGTGATGGATTGAACCAGCTGCCCTTTGACCCTGCTAACAACAACGAGCCCCTGCAGTTTGGTAGTGCCAGTGGCCCTCTGGTCACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338144.8
ENST00000394363.6
ENST00000432489.5
ENST00000492263.1
CDS CAA 72 bp AGAGGGCCACTGGCACTACCAAACTGCAGGGGCTCGTaGTTGTTAGCAGGGTCAAAGGGCAGCTGGTTCAAT +
Preference number: 6 (lower is better)
Translates to: RGPLALPNCRGS*LLAGSKGSWFN
Trigger: ATTGAACCAGCTGCCCTTTGACCCTGCTAACAACAACGAGCCCCTGCAGTTTGGTAGTGCCAGTGGCCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338144.8
ENST00000394363.6
ENST00000432489.5
ENST00000492263.1
CDS CCA 72 bp TCAGCTTGTTTGCACCACACGCTGATGTTCTTCCGCTaGGCTTTTGTGAAGTGGTCCCATGCCTTCTGCTTG +
Preference number: 6 (lower is better)
Translates to: SACLHHTLMFFR*AFVKWSHAFCL
Trigger: CAAGCAGAAGGCATGGGACCACTTCACAAAAGCCCAGCGGAAGAACATCAGCGTGTGGTGCAAACAAGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000338144.8
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
ENST00000432489.5
CDS CCA 72 bp GCTCCAACTCCAGTCATTTCCTGCTTGAAGGTATGCTaGAGTCTACCCATGAGACACTCCACATCGCTGGTG +
Preference number: 6 (lower is better)
Translates to: APTPVISCLKVC*SLPMRHSTSLV
Trigger: CACCAGCGATGTGGAGTGTCTCATGGGTAGACTCCAGCATACCTTCAAGCAGGAAATGACTGGAGTTGGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338144.8
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS CAA 72 bp GTCCCATTTTCAGGCAGACCACCCACAAATACTGTTTaGCATCCTGGTGGTCTTTCTCGGGTTGCAGGAGGT +
Preference number: 6 (lower is better)
Translates to: VPFSGRPPTNTV*HPGGLSRVAGG
Trigger: ACCTCCTGCAACCCGAGAAAGACCACCAGGATGCAAAACAGTATTTGTGGGTGGTCTGCCTGAAAATGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338144.8
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
ENST00000432489.5
ENST00000492263.1
CDS CCA 72 bp TCATACAGGTCATCTCGAGCCTGTGCGAAATCAACGTaGAGTCTGCCTGTGTCCTTCTTGTCAGTACTAGAG +
Preference number: 6 (lower is better)
Translates to: SYRSSRACAKST*SLPVSFLSVLE
Trigger: CTCTAGTACTGACAAGAAGGACACAGGCAGACTCCACGTTGATTTCGCACAGGCTCGAGATGACCTGTATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338144.8
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
ENST00000432489.5
CDS CCA 72 bp GGTGGACGCAATCTTTCTTCTTCCATTCTTCTACGATaGCGCTCCTCTCTGGCTAGCATACGCTGTTTACAC +
Preference number: 6 (lower is better)
Translates to: GGRNLSSSILLR*RSSLASIRCLH
Trigger: GTGTAAACAGCGTATGCTAGCCAGAGAGGAGCGCCATCGTAGAAGAATGGAAGAAGAAAGATTGCGTCCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338144.8
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
ENST00000432489.5
CDS CCA 72 bp CTGTTCATGGTCTTCTCAAGAGGGTATTCGCTATCCTaGTTTGAGGCACACAGCCTAGAAGCACAGCTTTCC +
Preference number: 6 (lower is better)
Translates to: LFMVFSRGYSLS*FEAHSLEAQLS
Trigger: GGAAAGCTGTGCTTCTAGGCTGTGTGCCTCAAACCAGGATAGCGAATACCCTCTTGAGAAGACCATGAACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338144.8
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS CAA 90 bp ATTTGCTCTGTCCCATTTTCAGGCAGACCACCCACAAATACTGTTTaGCATCCTGGTGGTCTTTCTCGGGTTGCAGGAGGTGGGAGATTT +
Preference number: 6 (lower is better)
Translates to: ICSVPFSGRPPTNTV*HPGGLSRVAGGGRF
Trigger: AAATCTCCCACCTCCTGCAACCCGAGAAAGACCACCAGGATGCAAAACAGTATTTGTGGGTGGTCTGCCTGAAAATGGGACAGAGCAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338144.8
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
ENST00000432489.5
ENST00000492263.1
CDS TCA 72 bp GGTCATCTTCTCTGTGGACTTTGCCTTGTTCTTGCTTaGGCAGTTCTACTTCATTCCGGTAGGCATCGAGCT +
Preference number: 6 (lower is better)
Translates to: GHLLCGLCLVLA*AVLLHSGRHRA
Trigger: AGCTCGATGCCTACCGGAATGAAGTAGAACTGCTCAAGCAAGAACAAGGCAAAGTCCACAGAGAAGATGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338144.8
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS CAA 90 bp CAGCTGCTGTTCTTTGTTAGGGTCATCTTCTCTGTGGACTTTGCCTaGTTCTTGCTTGAGCAGTTCTACTTCATTCCGGTAGGCATCGAG +
Preference number: 6 (lower is better)
Translates to: QLLFFVRVIFSVDFA*FLLEQFYFIPVGIE
Trigger: CTCGATGCCTACCGGAATGAAGTAGAACTGCTCAAGCAAGAACAAGGCAAAGTCCACAGAGAAGATGACCCTAACAAAGAACAGCAGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338144.8
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS CAA 90 bp TGCATTCCTTGCAGGGCTTGTTGCAGGAGTTTCAGCTGCTGTTCTTaGTTAGGGTCATCTTCTCTGTGGACTTTGCCTTGTTCTTGCTTG +
Preference number: 6 (lower is better)
Translates to: CIPCRACCRSFSCCS*LGSSSLWTLPCSCL
Trigger: CAAGCAAGAACAAGGCAAAGTCCACAGAGAAGATGACCCTAACAAAGAACAGCAGCTGAAACTCCTGCAACAAGCCCTGCAAGGAATGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338144.8
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS TCA 72 bp TTATCGGCATCACACTTCTTTGTGTTCTCCAAGAATTaGTCTCAAATCAGGTTCCCTCCAGCTCCCCGGCTA +
Preference number: 6 (lower is better)
Translates to: LSASHFFVFSKN*SQIRFPPAPRL
Trigger: TAGCCGGGGAGCTGGAGGGAACCTGATTTGAGATCAATTCTTGGAGAACACAAAGAAGTGTGATGCCGATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370935.5
CDS CAA 72 bp GATCTCTCCACACTGCTCGAAAACTTCCACAATGATTaGCTCTGTCCCATTTTCAGGCAGACCACCCACAAA +
Preference number: 6 (lower is better)
Translates to: DLSTLLENFHND*LCPIFRQTTHK
Trigger: TTTGTGGGTGGTCTGCCTGAAAATGGGACAGAGCAAATCATTGTGGAAGTTTTCGAGCAGTGTGGAGAGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000338144.8
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
ENST00000432489.5
CDS CAA 72 bp GAGATAATCCCCACTAGCAGTGCTTCACGTTCAGATTaGATAGGACTGCTGTTCATGGTCTTCTCAAGAGGG +
Preference number: 6 (lower is better)
Translates to: EIIPTSSASRSD*IGLLFMVFSRG
Trigger: CCCTCTTGAGAAGACCATGAACAGCAGTCCTATCAAATCTGAACGTGAAGCACTGCTAGTGGGGATTATCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338144.8
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS CAA 90 bp AGGAATGTGGAGATAATCCCCACTAGCAGTGCTTCACGTTCAGATTaGATAGGACTGCTGTTCATGGTCTTCTCAAGAGGGTATTCGCTA +
Preference number: 6 (lower is better)
Translates to: RNVEIIPTSSASRSD*IGLLFMVFSRGYSL
Trigger: TAGCGAATACCCTCTTGAGAAGACCATGAACAGCAGTCCTATCAAATCTGAACGTGAAGCACTGCTAGTGGGGATTATCTCCACATTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338144.8
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS GCA 72 bp ATCTCTCCACACTGCTCGAAAACTTCCACAATGATTTaGTCTGTCCCATTTTCAGGCAGACCACCCACAAAT +
Preference number: 6 (lower is better)
Translates to: ISPHCSKTSTMI*SVPFSGRPPTN
Trigger: ATTTGTGGGTGGTCTGCCTGAAAATGGGACAGAGCAAATCATTGTGGAAGTTTTCGAGCAGTGTGGAGAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000338144.8
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
ENST00000432489.5
CDS GCA 72 bp GAGAATTCCAGAAAGGGCCTGCTTGAACTTCTCCTTTaGTTCTTCCATATCTTTCTCATGGGCAGCTTTCTC +
Preference number: 6 (lower is better)
Translates to: ENSRKGLLELLL*FFHIFLMGSFL
Trigger: GAGAAAGCTGCCCATGAGAAAGATATGGAAGAAGCAAAGGAGAAGTTCAAGCAGGCCCTTTCTGGAATTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000338144.8
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
ENST00000432489.5
CDS CAA 90 bp GGCTGCATAGCCTATTTCGTAGACCCACAGCCATCTAAAATCTCTTaGCATTGTGTGGTCCTCAACTGTGAACTTAGCTCTGTCATCATT +
Preference number: 6 (lower is better)
Translates to: GCIAYFVDPQPSKIS*HCVVLNCELSSVII
Trigger: AATGATGACAGAGCTAAGTTCACAGTTGAGGACCACACAATGCAAAGAGATTTTAGATGGCTGTGGGTCTACGAAATAGGCTATGCAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338144.8
ENST00000492263.1
CDS CAA 72 bp GCCTATTTCGTAGACCCACAGCCATCTAAAATCTCTTaGCATTGTGTGGTCCTCAACTGTGAACTTAGCTCT +
Preference number: 6 (lower is better)
Translates to: AYFVDPQPSKIS*HCVVLNCELSS
Trigger: AGAGCTAAGTTCACAGTTGAGGACCACACAATGCAAAGAGATTTTAGATGGCTGTGGGTCTACGAAATAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338144.8
ENST00000492263.1
CDS CAA 72 bp CAAGACGGTGCAAGTAGGAACAGATGTATTCAATGCTaGCTCCAAATGGGTGAACATGAAGGAATGTGGAGA +
Preference number: 6 (lower is better)
Translates to: QDGASRNRCIQC*LQMGEHEGMWR
Trigger: TCTCCACATTCCTTCATGTTCACCCATTTGGAGCAAGCATTGAATACATCTGTTCCTACTTGCACCGTCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338144.8
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS CAA 90 bp AATGGCAATGATCTCTCCACACTGCTCGAAAACTTCCACAATGATTaGCTCTGTCCCATTTTCAGGCAGACCACCCACAAATACTGTTTT +
Preference number: 6 (lower is better)
Translates to: NGNDLSTLLENFHND*LCPIFRQTTHKYCF
Trigger: AAAACAGTATTTGTGGGTGGTCTGCCTGAAAATGGGACAGAGCAAATCATTGTGGAAGTTTTCGAGCAGTGTGGAGAGATCATTGCCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000338144.8
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
ENST00000432489.5
CDS TCA 72 bp GATTTGGAGGGAAGAGCGTGCAGCTTTTACAGTGTATaGTCTCTTTTACTACTGGCATATCTGGAGGAATTG +
Preference number: 6 (lower is better)
Translates to: DLEGRACSFYSV*SLLLLAYLEEL
Trigger: CAATTCCTCCAGATATGCCAGTAGTAAAAGAGATCATACACTGTAAAAGCTGCACGCTCTTCCCTCCAAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000338144.8
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
ENST00000432489.5
ENST00000492263.1
CDS GCA 72 bp TATCAAGACGGTGCAAGTAGGAACAGATGTATTCAATaGTTGCTCCAAATGGGTGAACATGAAGGAATGTGG +
Preference number: 6 (lower is better)
Translates to: YQDGASRNRCIQ*LLQMGEHEGMW
Trigger: CCACATTCCTTCATGTTCACCCATTTGGAGCAAGCATTGAATACATCTGTTCCTACTTGCACCGTCTTGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338144.8
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS CCA 72 bp TATGATCTCTTTTACTACTGGCATATCTGGAGGAATTaGTGGAGGTACTATTCCCAAACCAGGCATCATTGG +
Preference number: 6 (lower is better)
Translates to: YDLFYYWHIWRN*WRYYSQTRHHW
Trigger: CCAATGATGCCTGGTTTGGGAATAGTACCTCCACCAATTCCTCCAGATATGCCAGTAGTAAAAGAGATCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000338144.8
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
ENST00000432489.5
ENST00000492263.1
CDS CAA 72 bp TTCTTTGTTAGGGTCATCTTCTCTGTGGACTTTGCCTaGTTCTTGCTTGAGCAGTTCTACTTCATTCCGGTA +
Preference number: 6 (lower is better)
Translates to: FFVRVIFSVDFA*FLLEQFYFIPV
Trigger: TACCGGAATGAAGTAGAACTGCTCAAGCAAGAACAAGGCAAAGTCCACAGAGAAGATGACCCTAACAAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338144.8
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS CAA 72 bp TGCTGTTCTTTGTTAGGGTCATCTTCTCTGTGGACTTaGCCTTGTTCTTGCTTGAGCAGTTCTACTTCATTC +
Preference number: 6 (lower is better)
Translates to: CCSLLGSSSLWT*PCSCLSSSTSF
Trigger: GAATGAAGTAGAACTGCTCAAGCAAGAACAAGGCAAAGTCCACAGAGAAGATGACCCTAACAAAGAACAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000338144.8
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6
CDS CAA 90 bp TGTAACTTGTCATCTTTGAGTTTTTCAAGTTCAGCTTCTTTCTTTTaGTATTCCTCTTGGACTTTGAGTAGATGCTGTTGCATTCCTTGC +
Preference number: 6 (lower is better)
Translates to: CNLSSLSFSSSASFF*YSSWTLSRCCCIPC
Trigger: GCAAGGAATGCAACAGCATCTACTCAAAGTCCAAGAGGAATACAAAAAGAAAGAAGCTGAACTTGAAAAACTCAAAGATGACAAGTTACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338144.8
ENST00000370927.5
ENST00000370935.5
ENST00000394363.6