RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ENO4 (Homo sapiens)

Ensembl gene IDs: ENSG00000188316

Ensembl transcript IDs: ENST00000341276.11, ENST00000369207.3, ENST00000409522.5, ENST00000622726.4

Found 313 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR TCA 90 bp CATCTGTTCCCAGCACAGAGAGCTTCTAGGGTCATTAGGTTTTTGTTCTCAGAGAAAGGATGGGGTGTTTaGCTGAGTGTGGAGTTGGCA +
Preference number: 2 (lower is better)
Translates to: HLFPAQRASRVIRFLFSEKGWGV*LSVELA
Trigger: TGCCAACTCCACACTCAGTCAAACACCCCATCCTTT...CTCTGAGAACAAAAACCTAATGACCCTAGAAGCTCTCTGTGCTGGGAACAGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
3UTR-3UTR CCA 90 bp AGGATGGGGTGTTTGACTGAGTGTGGAGTTGGCAACAAAAATATTGGCCTCTTTAGAGGAAACTCCATGTaGAGACACGGCGCCGTACTT +
Preference number: 2 (lower is better)
Translates to: RMGCLTECGVGNKNIGLFRGNSM*RHGAVL
Trigger: AAGTACGGCGCCGTGTCTCCACATGGAGTTTCCTCT...AAAGAGGCCAATATTTTTGTTGCCAACTCCACACTCAGTCAAACACCCCATCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
3UTR-3UTR GCA 90 bp GAGTGTGGAGTTGGCAACAAAAATATTGGCCTCTTTTACTGGAGCGTGTCCCTGTGGAAGTGTGGTGGCTaGAAAACGAAGTTCACAGAA +
Preference number: 2 (lower is better)
Translates to: ECGVGNKNIGLFYWSVSLWKCGG*KTKFTE
Trigger: TTCTGTGAACTTCGTTTTGCAGCCACCACACTTCCA...CAGGGACACGCTCCAGTAAAAGAGGCCAATATTTTTGTTGCCAACTCCACACTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
3UTR-3UTR CCA 90 bp ACAGGAGAGCTAATAGACAAACAAAATCCACATGGAAGTGTGGTGGCTGCAAAAAGAGGAAACTCCATGTaGAGACACGGCGCCGTACTT +
Preference number: 2 (lower is better)
Translates to: TGELIDKQNPHGSVVAAKRGNSM*RHGAVL
Trigger: AAGTACGGCGCCGTGTCTCCACATGGAGTTTCCTCT...TTTTGCAGCCACCACACTTCCATGTGGATTTTGTTTGTCTATTAGCTCTCCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
3UTR-3UTR CCA 90 bp CATCTGTTCCCAGCACAGAGAGCTTCTAGGGTCATTAGGTTTTTGTTCTCAGAGCACATGGAAGTGTGGTaGCTGCAAAACGAAGTTCAC +
Preference number: 2 (lower is better)
Translates to: HLFPAQRASRVIRFLFSEHMEVW*LQNEVH
Trigger: GTGAACTTCGTTTTGCAGCCACCACACTTCCATGTG...CTCTGAGAACAAAAACCTAATGACCCTAGAAGCTCTCTGTGCTGGGAACAGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
3UTR-3UTR CCA 90 bp GATGCTCTCACACTTCTACGTGAGGTTGGTTACAAAAATGTGTCAGTGCTTTTCCTAATACTGATGGTGTaGCTGGAACCTGGGGTGTGT +
Preference number: 2 (lower is better)
Translates to: DALTLLREVGYKNVSVLFLILMV*LEPGVC
Trigger: ACACACCCCAGGTTCCAGCCACACCATCAGTATTAG...GAAAAGCACTGACACATTTTTGTAACCAACCTCACGTAGAAGTGTGAGAGCATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
3UTR-3UTR CCA 90 bp GATGCTCTCACACTTCTACGTGAGGTTGGTTACAAAAATGTGTCAGTGCTTTTCCACATGGAAGTGTGGTaGCTGCAAAACGAAGTTCAC +
Preference number: 2 (lower is better)
Translates to: DALTLLREVGYKNVSVLFHMEVW*LQNEVH
Trigger: GTGAACTTCGTTTTGCAGCCACCACACTTCCATGTG...GAAAAGCACTGACACATTTTTGTAACCAACCTCACGTAGAAGTGTGAGAGCATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
3UTR-3UTR CCA 90 bp CATCTGTTCCCAGCACAGAGAGCTTCTAGGGTCATTAGGTTTTTGTTCTCAGAGCAAACAAAATCCACATaGAAGTGTGGTGGCTGCAAA +
Preference number: 2 (lower is better)
Translates to: HLFPAQRASRVIRFLFSEQTKST*KCGGCK
Trigger: TTTGCAGCCACCACACTTCCATGTGGATTTTGTTTG...CTCTGAGAACAAAAACCTAATGACCCTAGAAGCTCTCTGTGCTGGGAACAGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
3UTR-3UTR TCA 90 bp TTATTTCTGCTACTCCTCTGCTATAATCCCAACACTGGCTTACAAAAGAGCAATGATGGGGTGTTTGACTaGGTGTGGAGTTGGCAACAA +
Preference number: 2 (lower is better)
Translates to: LFLLLLCYNPNTGLQKSNDGVFD*VWSWQQ
Trigger: TTGTTGCCAACTCCACACTCAGTCAAACACCCCATC...ATTGCTCTTTTGTAAGCCAGTGTTGGGATTATAGCAGAGGAGTAGCAGAAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
3UTR-3UTR CCA 90 bp CATCTGTTCCCAGCACAGAGAGCTTCTAGGGTCATTAGGTTTTTGTTCTCAGAGTGGCAACAAAAATATTaGCCTCTTTTACTGGAGCGT +
Preference number: 2 (lower is better)
Translates to: HLFPAQRASRVIRFLFSEWQQKY*PLLLER
Trigger: ACGCTCCAGTAAAAGAGGCCAATATTTTTGTTGCCA...CTCTGAGAACAAAAACCTAATGACCCTAGAAGCTCTCTGTGCTGGGAACAGATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
3UTR-3UTR CCA 90 bp GGAGAAGCAAATGGTAACCATTTTAACGAGACCCTAAATCATATAAAGTGGTTGCAAACAAAATCCACATaGAAGTGTGGTGGCTGCAAA +
Preference number: 2 (lower is better)
Translates to: GEANGNHFNETLNHIKWLQTKST*KCGGCK
Trigger: TTTGCAGCCACCACACTTCCATGTGGATTTTGTTTG...CAACCACTTTATATGATTTAGGGTCTCGTTAAAATGGTTACCATTTGCTTCTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341276.11
ENST00000622726.4
3UTR-3UTR CCA 90 bp TTATTTCTGCTACTCCTCTGCTATAATCCCAACACTGGCTTACAAAAGAGCAATTGGCAACAAAAATATTaGCCTCTTTTACTGGAGCGT +
Preference number: 2 (lower is better)
Translates to: LFLLLLCYNPNTGLQKSNWQQKY*PLLLER
Trigger: ACGCTCCAGTAAAAGAGGCCAATATTTTTGTTGCCA...ATTGCTCTTTTGTAAGCCAGTGTTGGGATTATAGCAGAGGAGTAGCAGAAATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
3UTR CAA 90 bp ATTGTTTGTGGTGTGTTTTATTCCCATTTACAATTAGCCTCATCTTaGGCCAGTTTATTTGATCGTGCTTACAGACTGCTCCATCACATA +
Preference number: 2 (lower is better)
Translates to: IVCGVFYSHLQLASS*ASLFDRAYRLLHHI
Trigger: TATGTGATGGAGCAGTCTGTAAGCACGATCAAATAAACTGGCCAAAGATGAGGCTAATTGTAAATGGGAATAAAACACACCACAAACAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369207.3
3UTR-3UTR CCA 90 bp TATATTTATTTCTGCTACTCCTCTGCTATAATCCCAACACTGGCTTACAAAAGACAAACAAAATCCACATaGAAGTGTGGTGGCTGCAAA +
Preference number: 2 (lower is better)
Translates to: YIYFCYSSAIIPTLAYKRQTKST*KCGGCK
Trigger: TTTGCAGCCACCACACTTCCATGTGGATTTTGTTTG...TCTTTTGTAAGCCAGTGTTGGGATTATAGCAGAGGAGTAGCAGAAATAAATATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
3UTR-3UTR CCA 90 bp TATATTTATTTCTGCTACTCCTCTGCTATAATCCCAACACTGGCTTACAAAAGAATTGGCCTCTTTTACTaGAGCGTGTCCCTGAAAAAT +
Preference number: 2 (lower is better)
Translates to: YIYFCYSSAIIPTLAYKRIGLFY*SVSLKN
Trigger: ATTTTTCAGGGACACGCTCCAGTAAAAGAGGCCAAT...TCTTTTGTAAGCCAGTGTTGGGATTATAGCAGAGGAGTAGCAGAAATAAATATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
3UTR-3UTR CCA 90 bp TTATTTCTGCTACTCCTCTGCTATAATCCCAACACTGGCTTACAAAAGAGCAATTGTGGTATGAATAACTaGGCATTTAATAACCTTGAG +
Preference number: 2 (lower is better)
Translates to: LFLLLLCYNPNTGLQKSNCGMNN*AFNNLE
Trigger: CTCAAGGTTATTAAATGCCCAGTTATTCATACCACA...ATTGCTCTTTTGTAAGCCAGTGTTGGGATTATAGCAGAGGAGTAGCAGAAATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
3UTR-3UTR CCA 90 bp GGAGAAGCAAATGGTAACCATTTTAACGAGACCCTAAATCATATAAAGTGGTTGGAGCAATTCAGGCAATaGATATGTCACATCATTTTT +
Preference number: 2 (lower is better)
Translates to: GEANGNHFNETLNHIKWLEQFRQ*ICHIIF
Trigger: AAAAATGATGTGACATATCCATTGCCTGAATTGCTC...CAACCACTTTATATGATTTAGGGTCTCGTTAAAATGGTTACCATTTGCTTCTCC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341276.11
ENST00000622726.4
3UTR CCA 72 bp ATGGACAGGAGAGCTAATAGACAAACAAAATCCACATaGAAGTGTGGTGGCTGCAAAACGAAGTTCACAGAA +
Preference number: 3 (lower is better)
Translates to: MDRRANRQTKST*KCGGCKTKFTE
Trigger: TTCTGTGAACTTCGTTTTGCAGCCACCACACTTCCATGTGGATTTTGTTTGTCTATTAGCTCTCCTGTCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
3UTR-3UTR CAA 90 bp TTATTTCTGCTACTCCTCTGCTATAATCCCAACACTGGCTTACAAAAGAGCAATTTGGCAACAAAAATATaGGCCTCTTTTACTGGAGCG +
Preference number: 3 (lower is better)
Translates to: LFLLLLCYNPNTGLQKSNLATKI*ASFTGA
Trigger: CGCTCCAGTAAAAGAGGCCAATATTTTTGTTGCCAA...ATTGCTCTTTTGTAAGCCAGTGTTGGGATTATAGCAGAGGAGTAGCAGAAATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
3UTR-3UTR CAA 90 bp TTATTTCTGCTACTCCTCTGCTATAATCCCAACACTGGCTTACAAAAGAGCAATCACTTCTACGTGAGGTaGGTTACAAAAATGTGTCAG +
Preference number: 3 (lower is better)
Translates to: LFLLLLCYNPNTGLQKSNHFYVR*VTKMCQ
Trigger: CTGACACATTTTTGTAACCAACCTCACGTAGAAGTG...ATTGCTCTTTTGTAAGCCAGTGTTGGGATTATAGCAGAGGAGTAGCAGAAATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
3UTR-3UTR CAA 90 bp GGAGAAGCAAATGGTAACCATTTTAACGAGACCCTAAATCATATAAAGTGGTTGTTGGCAACAAAAATATaGGCCTCTTTTACTGGAGCG +
Preference number: 3 (lower is better)
Translates to: GEANGNHFNETLNHIKWLLATKI*ASFTGA
Trigger: CGCTCCAGTAAAAGAGGCCAATATTTTTGTTGCCAA...CAACCACTTTATATGATTTAGGGTCTCGTTAAAATGGTTACCATTTGCTTCTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341276.11
ENST00000622726.4
3UTR-3UTR CAA 90 bp TTATTTCTGCTACTCCTCTGCTATAATCCCAACACTGGCTTACAAAAGAGCAATTTTATCACTTGCGGATaGCTTTTTAAATGCTGTGGT +
Preference number: 3 (lower is better)
Translates to: LFLLLLCYNPNTGLQKSNFITCG*LFKCCG
Trigger: ACCACAGCATTTAAAAAGCAATCCGCAAGTGATAAA...ATTGCTCTTTTGTAAGCCAGTGTTGGGATTATAGCAGAGGAGTAGCAGAAATAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR CCA 90 bp GACACGGCGCCGTACTTCAGACCTCCCGGTCTACTAATACTGATGGTGTGGCTGCTGCCTCCTCCGCCTTaGCCAGCTCGGGCAGAGCAT +
Preference number: 4 (lower is better)
Translates to: DTAPYFRPPGLLILMVWLLPPPP*PARAEH
Trigger: ATGCTCTGCCCGAGCTGGCCAAGGCGGAGGAGGCAG...CAGCCACACCATCAGTATTAGTAGACCGGGAGGTCTGAAGTACGGCGCCGTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341276.11
ENST00000622726.4
CDS-3UTR CCA 90 bp GACACGGCGCCGTACTTCAGACCTCCCGGTCTACTAATACTGATGGTGTGGCTGGAGGGTGCCATCCCCTaGAGCTCGTGCGTGATGGTG +
Preference number: 4 (lower is better)
Translates to: DTAPYFRPPGLLILMVWLEGAIP*SSCVMV
Trigger: CACCATCACGCACGAGCTCCAGGGGATGGCACCCTC...CAGCCACACCATCAGTATTAGTAGACCGGGAGGTCTGAAGTACGGCGCCGTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341276.11
ENST00000622726.4
CDS-3UTR GCA 90 bp GAGTGTGGAGTTGGCAACAAAAATATTGGCCTCTTTTACTGGAGCGTGTCCCTGCCCACTGCACGGCGGTaGTCACCGCGCTGGCCCTCT +
Preference number: 4 (lower is better)
Translates to: ECGVGNKNIGLFYWSVSLPTARR*SPRWPS
Trigger: AGAGGGCCAGCGCGGTGAGCACCGCCGTGCAGTGGG...CAGGGACACGCTCCAGTAAAAGAGGCCAATATTTTTGTTGCCAACTCCACACTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341276.11
ENST00000622726.4
CDS-3UTR GCA 90 bp ACCTCCCGGTCTACTAATACTGATGGTGTGGCTGGAACCTGGGGTGTGTACAGCCGCAGCAGCCTCAAGTaGCTCCGCAGCCTTTTCAGC +
Preference number: 4 (lower is better)
Translates to: TSRSTNTDGVAGTWGVYSRSSLK*LRSLFS
Trigger: GCTGAAAAGGCTGCGGAGGCACTTGAGGCTGCTGCG...GCTGTACACACCCCAGGTTCCAGCCACACCATCAGTATTAGTAGACCGGGAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR GCA 90 bp GACACGGCGCCGTACTTCAGACCTCCCGGTCTACTAATACTGATGGTGTGGCTGTGCTGCTTCAGCTTCTaGAGCTCCCTAGTGGTCCCA +
Preference number: 4 (lower is better)
Translates to: DTAPYFRPPGLLILMVWLCCFSF*SSLVVP
Trigger: TGGGACCACTAGGGAGCTGCAGAAGCTGAAGCAGCA...CAGCCACACCATCAGTATTAGTAGACCGGGAGGTCTGAAGTACGGCGCCGTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR TCA 90 bp GCCGTACTTCAGACCTCCCGGTCTACTAATACTGATGGTGTGGCTGGAACCTGGATGACTTCCCACAGCTaGCCAGCGATACCATCAGCA +
Preference number: 4 (lower is better)
Translates to: AVLQTSRSTNTDGVAGTWMTSHS*PAIPSA
Trigger: TGCTGATGGTATCGCTGGTCAGCTGTGGGAAGTCAT...CCAGGTTCCAGCCACACCATCAGTATTAGTAGACCGGGAGGTCTGAAGTACGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341276.11
ENST00000622726.4
CDS-3UTR TCA 90 bp ACCTCCCGGTCTACTAATACTGATGGTGTGGCTGGAACCTGGGGTGTGTACAGCGATGGGGTGTTTGACTaGGTGTGGAGTTGGCAACAA +
Preference number: 4 (lower is better)
Translates to: TSRSTNTDGVAGTWGVYSDGVFD*VWSWQQ
Trigger: TTGTTGCCAACTCCACACTCAGTCAAACACCCCATC...GCTGTACACACCCCAGGTTCCAGCCACACCATCAGTATTAGTAGACCGGGAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR GCA 90 bp CATCTGTTCCCAGCACAGAGAGCTTCTAGGGTCATTAGGTTTTTGTTCTCAGAGGCAGCTCTTCCAGCCTaGGCGGAACGTCGTTCTCCC +
Preference number: 4 (lower is better)
Translates to: HLFPAQRASRVIRFLFSEAALPA*AERRSP
Trigger: GGGAGAACGACGTTCCGCGCAGGCTGGAAGAGCTGC...CTCTGAGAACAAAAACCTAATGACCCTAGAAGCTCTCTGTGCTGGGAACAGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR GCA 90 bp AGGATGGGGTGTTTGACTGAGTGTGGAGTTGGCAACAAAAATATTGGCCTCTTTGTGCTGTTGACCCACTaGACGGCGGTGCTCACCGCG +
Preference number: 4 (lower is better)
Translates to: RMGCLTECGVGNKNIGLFVLLTH*TAVLTA
Trigger: CGCGGTGAGCACCGCCGTGCAGTGGGTCAACAGCAC...AAAGAGGCCAATATTTTTGTTGCCAACTCCACACTCAGTCAAACACCCCATCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341276.11
ENST00000622726.4
CDS-3UTR CCA 90 bp CACATGGAAGTGTGGTGGCTGCAAAACGAAGTTCACAGAATTTCAGGCAAAAACCAGCGGGGTTTAGCCTaGGGTCCCACGAGCGTCCCT +
Preference number: 4 (lower is better)
Translates to: HMEVWWLQNEVHRISGKNQRGLA*GPTSVP
Trigger: AGGGACGCTCGTGGGACCCCAGGCTAAACCCCGCTG...GTTTTTGCCTGAAATTCTGTGAACTTCGTTTTGCAGCCACCACACTTCCATGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR CCA 90 bp AAATCCACATGGAAGTGTGGTGGCTGCAAAACGAAGTTCACAGAATTTCAGGCACAGCGGGGTTTAGCCTaGGGTCCCACGAGCGTCCCT +
Preference number: 4 (lower is better)
Translates to: KSTWKCGGCKTKFTEFQAQRGLA*GPTSVP
Trigger: AGGGACGCTCGTGGGACCCCAGGCTAAACCCCGCTG...TGCCTGAAATTCTGTGAACTTCGTTTTGCAGCCACCACACTTCCATGTGGATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR CCA 90 bp GACACGGCGCCGTACTTCAGACCTCCCGGTCTACTAATACTGATGGTGTGGCTGCACATGGAAGTGTGGTaGCTGCAAAACGAAGTTCAC +
Preference number: 4 (lower is better)
Translates to: DTAPYFRPPGLLILMVWLHMEVW*LQNEVH
Trigger: GTGAACTTCGTTTTGCAGCCACCACACTTCCATGTG...CAGCCACACCATCAGTATTAGTAGACCGGGAGGTCTGAAGTACGGCGCCGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR TCA 90 bp AACTCCATGTGGAGACACGGCGCCGTACTTCAGACCTCCCGGTCTACTAATACTCCAGTGATCTGCTGTTaGCCTCTTTTGCTTCCATCG +
Preference number: 4 (lower is better)
Translates to: NSMWRHGAVLQTSRSTNTPVICC*PLLLPS
Trigger: CGATGGAAGCAAAAGAGGTCAACAGCAGATCACTGG...AGTATTAGTAGACCGGGAGGTCTGAAGTACGGCGCCGTGTCTCCACATGGAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR TCA 90 bp GACACGGCGCCGTACTTCAGACCTCCCGGTCTACTAATACTGATGGTGTGGCTGTGGATTTGGGGATGCTaGTGTTTCCTTGCTCTAGAA +
Preference number: 4 (lower is better)
Translates to: DTAPYFRPPGLLILMVWLWIWGC*CFLALE
Trigger: TTCTAGAGCAAGGAAACATCAGCATCCCCAAATCCA...CAGCCACACCATCAGTATTAGTAGACCGGGAGGTCTGAAGTACGGCGCCGTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR TCA 90 bp AACTCCATGTGGAGACACGGCGCCGTACTTCAGACCTCCCGGTCTACTAATACTGATGGGGTGTTTGACTaGGTGTGGAGTTGGCAACAA +
Preference number: 4 (lower is better)
Translates to: NSMWRHGAVLQTSRSTNTDGVFD*VWSWQQ
Trigger: TTGTTGCCAACTCCACACTCAGTCAAACACCCCATC...AGTATTAGTAGACCGGGAGGTCTGAAGTACGGCGCCGTGTCTCCACATGGAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR GCA 90 bp AAATCCACATGGAAGTGTGGTGGCTGCAAAACGAAGTTCACAGAATTTCAGGCAGCAGCTCTTCCAGCCTaGGCGGAACGTCGTTCTCCC +
Preference number: 4 (lower is better)
Translates to: KSTWKCGGCKTKFTEFQAAALPA*AERRSP
Trigger: GGGAGAACGACGTTCCGCGCAGGCTGGAAGAGCTGC...TGCCTGAAATTCTGTGAACTTCGTTTTGCAGCCACCACACTTCCATGTGGATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR GCA 90 bp TTATTTCTGCTACTCCTCTGCTATAATCCCAACACTGGCTTACAAAAGAGCAATCCCACTGCACGGCGGTaGTCACCGCGCTGGCCCTCT +
Preference number: 4 (lower is better)
Translates to: LFLLLLCYNPNTGLQKSNPTARR*SPRWPS
Trigger: AGAGGGCCAGCGCGGTGAGCACCGCCGTGCAGTGGG...ATTGCTCTTTTGTAAGCCAGTGTTGGGATTATAGCAGAGGAGTAGCAGAAATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341276.11
ENST00000622726.4
CDS-3UTR GCA 90 bp GCCGTACTTCAGACCTCCCGGTCTACTAATACTGATGGTGTGGCTGGAACCTGGCAAGTGCGTGATAGATaGTGTCCCACTGTTCAGAGT +
Preference number: 4 (lower is better)
Translates to: AVLQTSRSTNTDGVAGTWQVRDR*CPTVQS
Trigger: ACTCTGAACAGTGGGACAGCATCTATCACGCACTTG...CCAGGTTCCAGCCACACCATCAGTATTAGTAGACCGGGAGGTCTGAAGTACGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR CCA 90 bp GATGCTCTCACACTTCTACGTGAGGTTGGTTACAAAAATGTGTCAGTGCTTTTCCAGCGGGGTTTAGCCTaGGGTCCCACGAGCGTCCCT +
Preference number: 4 (lower is better)
Translates to: DALTLLREVGYKNVSVLFQRGLA*GPTSVP
Trigger: AGGGACGCTCGTGGGACCCCAGGCTAAACCCCGCTG...GAAAAGCACTGACACATTTTTGTAACCAACCTCACGTAGAAGTGTGAGAGCATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR CCA 90 bp GCCGTACTTCAGACCTCCCGGTCTACTAATACTGATGGTGTGGCTGGAACCTGGCACATGGAAGTGTGGTaGCTGCAAAACGAAGTTCAC +
Preference number: 4 (lower is better)
Translates to: AVLQTSRSTNTDGVAGTWHMEVW*LQNEVH
Trigger: GTGAACTTCGTTTTGCAGCCACCACACTTCCATGTG...CCAGGTTCCAGCCACACCATCAGTATTAGTAGACCGGGAGGTCTGAAGTACGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR TCA 90 bp GACACGGCGCCGTACTTCAGACCTCCCGGTCTACTAATACTGATGGTGTGGCTGTTGAAGGGTACTTGTTaGTCAGATCCACATACAGGT +
Preference number: 4 (lower is better)
Translates to: DTAPYFRPPGLLILMVWLLKGTC*SDPHTG
Trigger: ACCTGTATGTGGATCTGATCAACAAGTACCCTTCAA...CAGCCACACCATCAGTATTAGTAGACCGGGAGGTCTGAAGTACGGCGCCGTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341276.11
ENST00000622726.4
CDS-3UTR TCA 90 bp GCCGTACTTCAGACCTCCCGGTCTACTAATACTGATGGTGTGGCTGGAACCTGGCAGAGTCCTCCTTCCTaGAAGGATCAATTAAGGCAA +
Preference number: 4 (lower is better)
Translates to: AVLQTSRSTNTDGVAGTWQSPPS*KDQLRQ
Trigger: TTGCCTTAATTGATCCTTTCAGGAAGGAGGACTCTG...CCAGGTTCCAGCCACACCATCAGTATTAGTAGACCGGGAGGTCTGAAGTACGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341276.11
ENST00000622726.4
CDS-3UTR TCA 90 bp GCCGTACTTCAGACCTCCCGGTCTACTAATACTGATGGTGTGGCTGGAACCTGGTGGATTTGGGGATGCTaGTGTTTCCTTGCTCTAGAA +
Preference number: 4 (lower is better)
Translates to: AVLQTSRSTNTDGVAGTWWIWGC*CFLALE
Trigger: TTCTAGAGCAAGGAAACATCAGCATCCCCAAATCCA...CCAGGTTCCAGCCACACCATCAGTATTAGTAGACCGGGAGGTCTGAAGTACGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR GCA 90 bp CCTGAAAAATGGACAGGAGAGCTAATAGACAAACAAAATCCACATGGAAGTGTGGTGCTGTTGACCCACTaGACGGCGGTGCTCACCGCG +
Preference number: 4 (lower is better)
Translates to: PEKWTGELIDKQNPHGSVVLLTH*TAVLTA
Trigger: CGCGGTGAGCACCGCCGTGCAGTGGGTCAACAGCAC...CACACTTCCATGTGGATTTTGTTTGTCTATTAGCTCTCCTGTCCATTTTTCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341276.11
ENST00000622726.4
CDS-3UTR GCA 90 bp GCCGTACTTCAGACCTCCCGGTCTACTAATACTGATGGTGTGGCTGGAACCTGGGCTGTTGACCTCTTTTaGTTCCATCGTGCCCTTTTT +
Preference number: 4 (lower is better)
Translates to: AVLQTSRSTNTDGVAGTWAVDLF*FHRALF
Trigger: AAAAAGGGCACGATGGAAGCAAAAGAGGTCAACAGC...CCAGGTTCCAGCCACACCATCAGTATTAGTAGACCGGGAGGTCTGAAGTACGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR GCA 90 bp ACCTCCCGGTCTACTAATACTGATGGTGTGGCTGGAACCTGGGGTGTGTACAGCGCTGTTGACCTCTTTTaGTTCCATCGTGCCCTTTTT +
Preference number: 4 (lower is better)
Translates to: TSRSTNTDGVAGTWGVYSAVDLF*FHRALF
Trigger: AAAAAGGGCACGATGGAAGCAAAAGAGGTCAACAGC...GCTGTACACACCCCAGGTTCCAGCCACACCATCAGTATTAGTAGACCGGGAGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR CCA 90 bp ACATGGAAGTGTGGTGGCTGCAAAACGAAGTTCACAGAATTTCAGGCAAAAACAGAGGGTGCCATCCCCTaGAGCTCGTGCGTGATGGTG +
Preference number: 4 (lower is better)
Translates to: TWKCGGCKTKFTEFQAKTEGAIP*SSCVMV
Trigger: CACCATCACGCACGAGCTCCAGGGGATGGCACCCTC...TGTTTTTGCCTGAAATTCTGTGAACTTCGTTTTGCAGCCACCACACTTCCATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341276.11
ENST00000622726.4
CDS-3UTR CCA 90 bp ACCTCCCGGTCTACTAATACTGATGGTGTGGCTGGAACCTGGGGTGTGTACAGCGTTCTAGCCCCAGGTTaGCACAGATTTCCTGTATTA +
Preference number: 4 (lower is better)
Translates to: TSRSTNTDGVAGTWGVYSVLAPG*HRFPVL
Trigger: TAATACAGGAAATCTGTGCCAACCTGGGGCTAGAAC...GCTGTACACACCCCAGGTTCCAGCCACACCATCAGTATTAGTAGACCGGGAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR CCA 90 bp GCCGTACTTCAGACCTCCCGGTCTACTAATACTGATGGTGTGGCTGGAACCTGGATCCACATGGAAGTGTaGTGGCTGCAAAACGAAGTT +
Preference number: 4 (lower is better)
Translates to: AVLQTSRSTNTDGVAGTWIHMEV*WLQNEV
Trigger: AACTTCGTTTTGCAGCCACCACACTTCCATGTGGAT...CCAGGTTCCAGCCACACCATCAGTATTAGTAGACCGGGAGGTCTGAAGTACGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR CCA 90 bp GACACGGCGCCGTACTTCAGACCTCCCGGTCTACTAATACTGATGGTGTGGCTGCAAACAAAATCCACATaGAAGTGTGGTGGCTGCAAA +
Preference number: 4 (lower is better)
Translates to: DTAPYFRPPGLLILMVWLQTKST*KCGGCK
Trigger: TTTGCAGCCACCACACTTCCATGTGGATTTTGTTTG...CAGCCACACCATCAGTATTAGTAGACCGGGAGGTCTGAAGTACGGCGCCGTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR CCA 90 bp ACCTCCCGGTCTACTAATACTGATGGTGTGGCTGGAACCTGGGGTGTGTACAGCCGTGTCCCTGAAAAATaGACAGGAGAGCTAATAGAC +
Preference number: 4 (lower is better)
Translates to: TSRSTNTDGVAGTWGVYSRVPEK*TGELID
Trigger: GTCTATTAGCTCTCCTGTCCATTTTTCAGGGACACG...GCTGTACACACCCCAGGTTCCAGCCACACCATCAGTATTAGTAGACCGGGAGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR CCA 90 bp GACACGGCGCCGTACTTCAGACCTCCCGGTCTACTAATACTGATGGTGTGGCTGATTGGCCTCTTTTACTaGAGCGTGTCCCTGAAAAAT +
Preference number: 4 (lower is better)
Translates to: DTAPYFRPPGLLILMVWLIGLFY*SVSLKN
Trigger: ATTTTTCAGGGACACGCTCCAGTAAAAGAGGCCAAT...CAGCCACACCATCAGTATTAGTAGACCGGGAGGTCTGAAGTACGGCGCCGTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR TCA 90 bp ACCTCCCGGTCTACTAATACTGATGGTGTGGCTGGAACCTGGGGTGTGTACAGCTTGAAGGGTACTTGTTaGTCAGATCCACATACAGGT +
Preference number: 4 (lower is better)
Translates to: TSRSTNTDGVAGTWGVYSLKGTC*SDPHTG
Trigger: ACCTGTATGTGGATCTGATCAACAAGTACCCTTCAA...GCTGTACACACCCCAGGTTCCAGCCACACCATCAGTATTAGTAGACCGGGAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341276.11
ENST00000622726.4
CDS-3UTR TCA 90 bp ACCTCCCGGTCTACTAATACTGATGGTGTGGCTGGAACCTGGGGTGTGTACAGCGGTTTGTGTGTTTTATaGTCAGCCCATTGGATTTGG +
Preference number: 4 (lower is better)
Translates to: TSRSTNTDGVAGTWGVYSGLCVL*SAHWIW
Trigger: CCAAATCCAATGGGCTGATCATAAAACACACAAACC...GCTGTACACACCCCAGGTTCCAGCCACACCATCAGTATTAGTAGACCGGGAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR TCA 90 bp GACACGGCGCCGTACTTCAGACCTCCCGGTCTACTAATACTGATGGTGTGGCTGTACTTCCAAAGACAGTaGTGTGCTTCTTACTGTCAA +
Preference number: 4 (lower is better)
Translates to: DTAPYFRPPGLLILMVWLYFQRQ*CASYCQ
Trigger: TTGACAGTAAGAAGCACATCACTGTCTTTGGAAGTA...CAGCCACACCATCAGTATTAGTAGACCGGGAGGTCTGAAGTACGGCGCCGTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR TCA 90 bp GAGTGTGGAGTTGGCAACAAAAATATTGGCCTCTTTTACTGGAGCGTGTCCCTGACTGGAGCGTGTCCCTaGAAAATGGACAGGAGAGCT +
Preference number: 4 (lower is better)
Translates to: ECGVGNKNIGLFYWSVSLTGACP*KMDRRA
Trigger: AGCTCTCCTGTCCATTTTTCAGGGACACGCTCCAGT...CAGGGACACGCTCCAGTAAAAGAGGCCAATATTTTTGTTGCCAACTCCACACTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR GCA 90 bp GACACGGCGCCGTACTTCAGACCTCCCGGTCTACTAATACTGATGGTGTGGCTGCAGTTGATAGCTAGATaGAGATTTGTTCCCAGTTCT +
Preference number: 4 (lower is better)
Translates to: DTAPYFRPPGLLILMVWLQLIAR*RFVPSS
Trigger: AGAACTGGGAACAAATCTGCATCTAGCTATCAACTG...CAGCCACACCATCAGTATTAGTAGACCGGGAGGTCTGAAGTACGGCGCCGTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR GCA 90 bp GACACGGCGCCGTACTTCAGACCTCCCGGTCTACTAATACTGATGGTGTGGCTGCCAAAGACAGTGATGTaGTTCTTACTGTCAATCAGA +
Preference number: 4 (lower is better)
Translates to: DTAPYFRPPGLLILMVWLPKTVM*FLLSIR
Trigger: TCTGATTGACAGTAAGAAGCACATCACTGTCTTTGG...CAGCCACACCATCAGTATTAGTAGACCGGGAGGTCTGAAGTACGGCGCCGTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR GCA 90 bp ACATGGAAGTGTGGTGGCTGCAAAACGAAGTTCACAGAATTTCAGGCAAAAACACGCAGCAGCCTCAAGTaGCTCCGCAGCCTTTTCAGC +
Preference number: 4 (lower is better)
Translates to: TWKCGGCKTKFTEFQAKTRSSLK*LRSLFS
Trigger: GCTGAAAAGGCTGCGGAGGCACTTGAGGCTGCTGCG...TGTTTTTGCCTGAAATTCTGTGAACTTCGTTTTGCAGCCACCACACTTCCATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR GCA 90 bp AACTCCATGTGGAGACACGGCGCCGTACTTCAGACCTCCCGGTCTACTAATACTTGGAAGTGTGGTGGCTaGAAAACGAAGTTCACAGAA +
Preference number: 4 (lower is better)
Translates to: NSMWRHGAVLQTSRSTNTWKCGG*KTKFTE
Trigger: TTCTGTGAACTTCGTTTTGCAGCCACCACACTTCCA...AGTATTAGTAGACCGGGAGGTCTGAAGTACGGCGCCGTGTCTCCACATGGAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR CCA 90 bp ACCTCCCGGTCTACTAATACTGATGGTGTGGCTGGAACCTGGGGTGTGTACAGCCCACTATTTTGCATATaGTGGGAGGCTTTGCAAGTT +
Preference number: 4 (lower is better)
Translates to: TSRSTNTDGVAGTWGVYSPLFCI*WEALQV
Trigger: AACTTGCAAAGCCTCCCACCATATGCAAAATAGTGG...GCTGTACACACCCCAGGTTCCAGCCACACCATCAGTATTAGTAGACCGGGAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341276.11
ENST00000622726.4
CDS-3UTR CCA 90 bp GCCGTACTTCAGACCTCCCGGTCTACTAATACTGATGGTGTGGCTGGAACCTGGCCACTATTTTGCATATaGTGGGAGGCTTTGCAAGTT +
Preference number: 4 (lower is better)
Translates to: AVLQTSRSTNTDGVAGTWPLFCI*WEALQV
Trigger: AACTTGCAAAGCCTCCCACCATATGCAAAATAGTGG...CCAGGTTCCAGCCACACCATCAGTATTAGTAGACCGGGAGGTCTGAAGTACGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341276.11
ENST00000622726.4
CDS-3UTR CCA 90 bp GACACGGCGCCGTACTTCAGACCTCCCGGTCTACTAATACTGATGGTGTGGCTGCAGAACATACGTTCTTaGGAAAGTTTTGAATGGTGC +
Preference number: 4 (lower is better)
Translates to: DTAPYFRPPGLLILMVWLQNIRS*ESFEWC
Trigger: GCACCATTCAAAACTTTCCCAAGAACGTATGTTCTG...CAGCCACACCATCAGTATTAGTAGACCGGGAGGTCTGAAGTACGGCGCCGTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341276.11
ENST00000622726.4
CDS-3UTR CCA 90 bp CATCTGTTCCCAGCACAGAGAGCTTCTAGGGTCATTAGGTTTTTGTTCTCAGAGGCATGGCACAGGCTTTaGCAACAGCTAGTGACACGG +
Preference number: 4 (lower is better)
Translates to: HLFPAQRASRVIRFLFSEAWHRL*QQLVTR
Trigger: CCGTGTCACTAGCTGTTGCCAAAGCCTGTGCCATGC...CTCTGAGAACAAAAACCTAATGACCCTAGAAGCTCTCTGTGCTGGGAACAGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000341276.11
ENST00000622726.4
CDS-3UTR CCA 90 bp AACTCCATGTGGAGACACGGCGCCGTACTTCAGACCTCCCGGTCTACTAATACTGTTCTAGCCCCAGGTTaGCACAGATTTCCTGTATTA +
Preference number: 4 (lower is better)
Translates to: NSMWRHGAVLQTSRSTNTVLAPG*HRFPVL
Trigger: TAATACAGGAAATCTGTGCCAACCTGGGGCTAGAAC...AGTATTAGTAGACCGGGAGGTCTGAAGTACGGCGCCGTGTCTCCACATGGAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR CCA 90 bp GCCGTACTTCAGACCTCCCGGTCTACTAATACTGATGGTGTGGCTGGAACCTGGATTGGCCTCTTTTACTaGAGCGTGTCCCTGAAAAAT +
Preference number: 4 (lower is better)
Translates to: AVLQTSRSTNTDGVAGTWIGLFY*SVSLKN
Trigger: ATTTTTCAGGGACACGCTCCAGTAAAAGAGGCCAAT...CCAGGTTCCAGCCACACCATCAGTATTAGTAGACCGGGAGGTCTGAAGTACGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR TCA 90 bp ACCTCCCGGTCTACTAATACTGATGGTGTGGCTGGAACCTGGGGTGTGTACAGCTACTTCCAAAGACAGTaGTGTGCTTCTTACTGTCAA +
Preference number: 4 (lower is better)
Translates to: TSRSTNTDGVAGTWGVYSYFQRQ*CASYCQ
Trigger: TTGACAGTAAGAAGCACATCACTGTCTTTGGAAGTA...GCTGTACACACCCCAGGTTCCAGCCACACCATCAGTATTAGTAGACCGGGAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR GCA 90 bp AAATCCACATGGAAGTGTGGTGGCTGCAAAACGAAGTTCACAGAATTTCAGGCATGCTGCTTCAGCTTCTaGAGCTCCCTAGTGGTCCCA +
Preference number: 4 (lower is better)
Translates to: KSTWKCGGCKTKFTEFQACCFSF*SSLVVP
Trigger: TGGGACCACTAGGGAGCTGCAGAAGCTGAAGCAGCA...TGCCTGAAATTCTGTGAACTTCGTTTTGCAGCCACCACACTTCCATGTGGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR GCA 90 bp CACATGGAAGTGTGGTGGCTGCAAAACGAAGTTCACAGAATTTCAGGCAAAAACTACTCCATCGCCTGCTaGTTCAGCTTCTGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: HMEVWWLQNEVHRISGKNYSIAC*FSFCSS
Trigger: GGAGCTGCAGAAGCTGAAGCAGCAGGCGATGGAGTA...GTTTTTGCCTGAAATTCTGTGAACTTCGTTTTGCAGCCACCACACTTCCATGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR GCA 90 bp ACAGGAGAGCTAATAGACAAACAAAATCCACATGGAAGTGTGGTGGCTGCAAAAATCCCCTGGAGCTCGTaGGTGATGGTGCTGTTGACC +
Preference number: 4 (lower is better)
Translates to: TGELIDKQNPHGSVVAAKIPWSS*VMVLLT
Trigger: GGTCAACAGCACCATCACGCACGAGCTCCAGGGGAT...TTTTGCAGCCACCACACTTCCATGTGGATTTTGTTTGTCTATTAGCTCTCCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341276.11
ENST00000622726.4
CDS-3UTR GCA 90 bp GATGCTCTCACACTTCTACGTGAGGTTGGTTACAAAAATGTGTCAGTGCTTTTCATCCCCTGGAGCTCGTaGGTGATGGTGCTGTTGACC +
Preference number: 4 (lower is better)
Translates to: DALTLLREVGYKNVSVLFIPWSS*VMVLLT
Trigger: GGTCAACAGCACCATCACGCACGAGCTCCAGGGGAT...GAAAAGCACTGACACATTTTTGTAACCAACCTCACGTAGAAGTGTGAGAGCATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341276.11
ENST00000622726.4
CDS-3UTR GCA 90 bp GCCGTACTTCAGACCTCCCGGTCTACTAATACTGATGGTGTGGCTGGAACCTGGCCAAAGACAGTGATGTaGTTCTTACTGTCAATCAGA +
Preference number: 4 (lower is better)
Translates to: AVLQTSRSTNTDGVAGTWPKTVM*FLLSIR
Trigger: TCTGATTGACAGTAAGAAGCACATCACTGTCTTTGG...CCAGGTTCCAGCCACACCATCAGTATTAGTAGACCGGGAGGTCTGAAGTACGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR CCA 90 bp TTAGCCTCATCTTTGGCCAGTTTATTTGATCGTGCTTACAGACTGCTCCATCACGCATGGCACAGGCTTTaGCAACAGCTAGTGACACGG +
Preference number: 4 (lower is better)
Translates to: LASSLASLFDRAYRLLHHAWHRL*QQLVTR
Trigger: CCGTGTCACTAGCTGTTGCCAAAGCCTGTGCCATGC...GTGATGGAGCAGTCTGTAAGCACGATCAAATAAACTGGCCAAAGATGAGGCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369207.3
CDS-3UTR CCA 90 bp ACATGGAAGTGTGGTGGCTGCAAAACGAAGTTCACAGAATTTCAGGCAAAAACAGGTGTGGCTGGAACCTaGGGTGTGTACAGCCCTATC +
Preference number: 4 (lower is better)
Translates to: TWKCGGCKTKFTEFQAKTGVAGT*GVYSPI
Trigger: GATAGGGCTGTACACACCCCAGGTTCCAGCCACACC...TGTTTTTGCCTGAAATTCTGTGAACTTCGTTTTGCAGCCACCACACTTCCATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR CCA 90 bp GAGTGTGGAGTTGGCAACAAAAATATTGGCCTCTTTTACTGGAGCGTGTCCCTGCTAATACTGATGGTGTaGCTGGAACCTGGGGTGTGT +
Preference number: 4 (lower is better)
Translates to: ECGVGNKNIGLFYWSVSLLILMV*LEPGVC
Trigger: ACACACCCCAGGTTCCAGCCACACCATCAGTATTAG...CAGGGACACGCTCCAGTAAAAGAGGCCAATATTTTTGTTGCCAACTCCACACTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR CCA 90 bp ACCTCCCGGTCTACTAATACTGATGGTGTGGCTGGAACCTGGGGTGTGTACAGCTGGCAACAAAAATATTaGCCTCTTTTACTGGAGCGT +
Preference number: 4 (lower is better)
Translates to: TSRSTNTDGVAGTWGVYSWQQKY*PLLLER
Trigger: ACGCTCCAGTAAAAGAGGCCAATATTTTTGTTGCCA...GCTGTACACACCCCAGGTTCCAGCCACACCATCAGTATTAGTAGACCGGGAGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR TCA 90 bp GATGCTCTCACACTTCTACGTGAGGTTGGTTACAAAAATGTGTCAGTGCTTTTCTGGCCATACTGCCACTaGGTACAGGCTCAACAGGCT +
Preference number: 4 (lower is better)
Translates to: DALTLLREVGYKNVSVLFWPYCH*VQAQQA
Trigger: AGCCTGTTGAGCCTGTACTCAGTGGCAGTATGGCCA...GAAAAGCACTGACACATTTTTGTAACCAACCTCACGTAGAAGTGTGAGAGCATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341276.11
ENST00000622726.4
CDS-3UTR TCA 90 bp CCTCATCTTTGGCCAGTTTATTTGATCGTGCTTACAGACTGCTCCATCACATATTGGCCATACTGCCACTaGGTACAGGCTCAACAGGCT +
Preference number: 4 (lower is better)
Translates to: PHLWPVYLIVLTDCSITYWPYCH*VQAQQA
Trigger: AGCCTGTTGAGCCTGTACTCAGTGGCAGTATGGCCA...ATATGTGATGGAGCAGTCTGTAAGCACGATCAAATAAACTGGCCAAAGATGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369207.3
CDS-3UTR TCA 90 bp CATCTGTTCCCAGCACAGAGAGCTTCTAGGGTCATTAGGTTTTTGTTCTCAGAGCCAGTGATCTGCTGTTaGCCTCTTTTGCTTCCATCG +
Preference number: 4 (lower is better)
Translates to: HLFPAQRASRVIRFLFSEPVICC*PLLLPS
Trigger: CGATGGAAGCAAAAGAGGTCAACAGCAGATCACTGG...CTCTGAGAACAAAAACCTAATGACCCTAGAAGCTCTCTGTGCTGGGAACAGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR TCA 90 bp CATCTGTTCCCAGCACAGAGAGCTTCTAGGGTCATTAGGTTTTTGTTCTCAGAGTGCTCCTGTTTCGGCTaGTTCCTCTACACCTTGTGT +
Preference number: 4 (lower is better)
Translates to: HLFPAQRASRVIRFLFSECSCFG*FLYTLC
Trigger: ACACAAGGTGTAGAGGAATCAGCCGAAACAGGAGCA...CTCTGAGAACAAAAACCTAATGACCCTAGAAGCTCTCTGTGCTGGGAACAGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR TCA 90 bp CACATGGAAGTGTGGTGGCTGCAAAACGAAGTTCACAGAATTTCAGGCAAAAACACTGGAGCGTGTCCCTaGAAAATGGACAGGAGAGCT +
Preference number: 4 (lower is better)
Translates to: HMEVWWLQNEVHRISGKNTGACP*KMDRRA
Trigger: AGCTCTCCTGTCCATTTTTCAGGGACACGCTCCAGT...GTTTTTGCCTGAAATTCTGTGAACTTCGTTTTGCAGCCACCACACTTCCATGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR TCA 90 bp AAATCCACATGGAAGTGTGGTGGCTGCAAAACGAAGTTCACAGAATTTCAGGCAACTGGAGCGTGTCCCTaGAAAATGGACAGGAGAGCT +
Preference number: 4 (lower is better)
Translates to: KSTWKCGGCKTKFTEFQATGACP*KMDRRA
Trigger: AGCTCTCCTGTCCATTTTTCAGGGACACGCTCCAGT...TGCCTGAAATTCTGTGAACTTCGTTTTGCAGCCACCACACTTCCATGTGGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR GCA 90 bp GGAGAAGCAAATGGTAACCATTTTAACGAGACCCTAAATCATATAAAGTGGTTGGCAGCTCTTCCAGCCTaGGCGGAACGTCGTTCTCCC +
Preference number: 4 (lower is better)
Translates to: GEANGNHFNETLNHIKWLAALPA*AERRSP
Trigger: GGGAGAACGACGTTCCGCGCAGGCTGGAAGAGCTGC...CAACCACTTTATATGATTTAGGGTCTCGTTAAAATGGTTACCATTTGCTTCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341276.11
ENST00000622726.4
CDS-3UTR GCA 90 bp CACATGGAAGTGTGGTGGCTGCAAAACGAAGTTCACAGAATTTCAGGCAAAAACAGGCTCAACAGGCTCTaGAGGCGCAATAGGTTTCTC +
Preference number: 4 (lower is better)
Translates to: HMEVWWLQNEVHRISGKNRLNRL*RRNRFL
Trigger: GAGAAACCTATTGCGCCTGCAGAGCCTGTTGAGCCT...GTTTTTGCCTGAAATTCTGTGAACTTCGTTTTGCAGCCACCACACTTCCATGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341276.11
ENST00000622726.4
CDS-3UTR CCA 90 bp TATATTTATTTCTGCTACTCCTCTGCTATAATCCCAACACTGGCTTACAAAAGACTGCCTCCTCCGCCTTaGCCAGCTCGGGCAGAGCAT +
Preference number: 4 (lower is better)
Translates to: YIYFCYSSAIIPTLAYKRLPPPP*PARAEH
Trigger: ATGCTCTGCCCGAGCTGGCCAAGGCGGAGGAGGCAG...TCTTTTGTAAGCCAGTGTTGGGATTATAGCAGAGGAGTAGCAGAAATAAATATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341276.11
ENST00000622726.4
CDS-3UTR CCA 90 bp AACTCCATGTGGAGACACGGCGCCGTACTTCAGACCTCCCGGTCTACTAATACTCAATTATGTAACACCTaGAACCAAGTGCGTGATAGA +
Preference number: 4 (lower is better)
Translates to: NSMWRHGAVLQTSRSTNTQLCNT*NQVRDR
Trigger: TCTATCACGCACTTGGTTCCAGGTGTTACATAATTG...AGTATTAGTAGACCGGGAGGTCTGAAGTACGGCGCCGTGTCTCCACATGGAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR CCA 90 bp ACCTCCCGGTCTACTAATACTGATGGTGTGGCTGGAACCTGGGGTGTGTACAGCTACTGTCAATCAGATTaGTTATTTCCACCAAGTCAG +
Preference number: 4 (lower is better)
Translates to: TSRSTNTDGVAGTWGVYSYCQSD*LFPPSQ
Trigger: CTGACTTGGTGGAAATAACCAATCTGATTGACAGTA...GCTGTACACACCCCAGGTTCCAGCCACACCATCAGTATTAGTAGACCGGGAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR CCA 90 bp AACTCCATGTGGAGACACGGCGCCGTACTTCAGACCTCCCGGTCTACTAATACTTGGCAACAAAAATATTaGCCTCTTTTACTGGAGCGT +
Preference number: 4 (lower is better)
Translates to: NSMWRHGAVLQTSRSTNTWQQKY*PLLLER
Trigger: ACGCTCCAGTAAAAGAGGCCAATATTTTTGTTGCCA...AGTATTAGTAGACCGGGAGGTCTGAAGTACGGCGCCGTGTCTCCACATGGAGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR CCA 90 bp AACTCCATGTGGAGACACGGCGCCGTACTTCAGACCTCCCGGTCTACTAATACTAATAAACACAGAAGATaGACATCTGTTCCCAGCACA +
Preference number: 4 (lower is better)
Translates to: NSMWRHGAVLQTSRSTNTNKHRR*TSVPST
Trigger: TGTGCTGGGAACAGATGTCCATCTTCTGTGTTTATT...AGTATTAGTAGACCGGGAGGTCTGAAGTACGGCGCCGTGTCTCCACATGGAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR TCA 90 bp CACATGGAAGTGTGGTGGCTGCAAAACGAAGTTCACAGAATTTCAGGCAAAAACAATATCCTGAGTAGGTaGTCCACCTCTGCCTGGTCA +
Preference number: 4 (lower is better)
Translates to: HMEVWWLQNEVHRISGKNNILSR*STSAWS
Trigger: TGACCAGGCAGAGGTGGATCACCTACTCAGGATATT...GTTTTTGCCTGAAATTCTGTGAACTTCGTTTTGCAGCCACCACACTTCCATGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341276.11
ENST00000622726.4
CDS-3UTR TCA 90 bp CCTGAAAAATGGACAGGAGAGCTAATAGACAAACAAAATCCACATGGAAGTGTGTGGCCATACTGCCACTaGGTACAGGCTCAACAGGCT +
Preference number: 4 (lower is better)
Translates to: PEKWTGELIDKQNPHGSVWPYCH*VQAQQA
Trigger: AGCCTGTTGAGCCTGTACTCAGTGGCAGTATGGCCA...CACACTTCCATGTGGATTTTGTTTGTCTATTAGCTCTCCTGTCCATTTTTCAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341276.11
ENST00000622726.4
CDS-3UTR TCA 90 bp CCTCATCTTTGGCCAGTTTATTTGATCGTGCTTACAGACTGCTCCATCACATATATGACTTCCCACAGCTaGCCAGCGATACCATCAGCA +
Preference number: 4 (lower is better)
Translates to: PHLWPVYLIVLTDCSITYMTSHS*PAIPSA
Trigger: TGCTGATGGTATCGCTGGTCAGCTGTGGGAAGTCAT...ATATGTGATGGAGCAGTCTGTAAGCACGATCAAATAAACTGGCCAAAGATGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369207.3
CDS-3UTR TCA 90 bp AGGATGGGGTGTTTGACTGAGTGTGGAGTTGGCAACAAAAATATTGGCCTCTTTGATGGGGTGTTTGACTaGGTGTGGAGTTGGCAACAA +
Preference number: 4 (lower is better)
Translates to: RMGCLTECGVGNKNIGLFDGVFD*VWSWQQ
Trigger: TTGTTGCCAACTCCACACTCAGTCAAACACCCCATC...AAAGAGGCCAATATTTTTGTTGCCAACTCCACACTCAGTCAAACACCCCATCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR TCA 90 bp AAATCCACATGGAAGTGTGGTGGCTGCAAAACGAAGTTCACAGAATTTCAGGCAAAAGGATGGGGTGTTTaGCTGAGTGTGGAGTTGGCA +
Preference number: 4 (lower is better)
Translates to: KSTWKCGGCKTKFTEFQAKGWGV*LSVELA
Trigger: TGCCAACTCCACACTCAGTCAAACACCCCATCCTTT...TGCCTGAAATTCTGTGAACTTCGTTTTGCAGCCACCACACTTCCATGTGGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR TCA 90 bp CACATGGAAGTGTGGTGGCTGCAAAACGAAGTTCACAGAATTTCAGGCAAAAACAAAGGATGGGGTGTTTaGCTGAGTGTGGAGTTGGCA +
Preference number: 4 (lower is better)
Translates to: HMEVWWLQNEVHRISGKNKGWGV*LSVELA
Trigger: TGCCAACTCCACACTCAGTCAAACACCCCATCCTTT...GTTTTTGCCTGAAATTCTGTGAACTTCGTTTTGCAGCCACCACACTTCCATGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR TCA 90 bp AACTCCATGTGGAGACACGGCGCCGTACTTCAGACCTCCCGGTCTACTAATACTGGTAGGAAAGTGAGATaGAATTGGCTCTTACAAAAA +
Preference number: 4 (lower is better)
Translates to: NSMWRHGAVLQTSRSTNTGRKVR*NWLLQK
Trigger: TTTTTGTAAGAGCCAATTTCATCTCACTTTCCTACC...AGTATTAGTAGACCGGGAGGTCTGAAGTACGGCGCCGTGTCTCCACATGGAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR GCA 90 bp CCTCATCTTTGGCCAGTTTATTTGATCGTGCTTACAGACTGCTCCATCACATATAGGCTCAACAGGCTCTaGAGGCGCAATAGGTTTCTC +
Preference number: 4 (lower is better)
Translates to: PHLWPVYLIVLTDCSITYRLNRL*RRNRFL
Trigger: GAGAAACCTATTGCGCCTGCAGAGCCTGTTGAGCCT...ATATGTGATGGAGCAGTCTGTAAGCACGATCAAATAAACTGGCCAAAGATGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369207.3
CDS-3UTR GCA 90 bp ACATGGAAGTGTGGTGGCTGCAAAACGAAGTTCACAGAATTTCAGGCAAAAACAAGGCTCAACAGGCTCTaGAGGCGCAATAGGTTTCTC +
Preference number: 4 (lower is better)
Translates to: TWKCGGCKTKFTEFQAKTRLNRL*RRNRFL
Trigger: GAGAAACCTATTGCGCCTGCAGAGCCTGTTGAGCCT...TGTTTTTGCCTGAAATTCTGTGAACTTCGTTTTGCAGCCACCACACTTCCATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341276.11
ENST00000622726.4
CDS-3UTR GCA 90 bp GAGTGTGGAGTTGGCAACAAAAATATTGGCCTCTTTTACTGGAGCGTGTCCCTGGTCAACCATCTCCGCTaGATTTTTGTATGTGCCCAT +
Preference number: 4 (lower is better)
Translates to: ECGVGNKNIGLFYWSVSLVNHLR*IFVCAH
Trigger: ATGGGCACATACAAAAATGCAGCGGAGATGGTTGAC...CAGGGACACGCTCCAGTAAAAGAGGCCAATATTTTTGTTGCCAACTCCACACTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000341276.11
ENST00000622726.4
CDS-3UTR GCA 90 bp GGAGAAGCAAATGGTAACCATTTTAACGAGACCCTAAATCATATAAAGTGGTTGCGCAGCAGCCTCAAGTaGCTCCGCAGCCTTTTCAGC +
Preference number: 4 (lower is better)
Translates to: GEANGNHFNETLNHIKWLRSSLK*LRSLFS
Trigger: GCTGAAAAGGCTGCGGAGGCACTTGAGGCTGCTGCG...CAACCACTTTATATGATTTAGGGTCTCGTTAAAATGGTTACCATTTGCTTCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341276.11
ENST00000622726.4
CDS-3UTR CCA 90 bp AAATCCACATGGAAGTGTGGTGGCTGCAAAACGAAGTTCACAGAATTTCAGGCACTAATACTGATGGTGTaGCTGGAACCTGGGGTGTGT +
Preference number: 4 (lower is better)
Translates to: KSTWKCGGCKTKFTEFQALILMV*LEPGVC
Trigger: ACACACCCCAGGTTCCAGCCACACCATCAGTATTAG...TGCCTGAAATTCTGTGAACTTCGTTTTGCAGCCACCACACTTCCATGTGGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR CCA 90 bp ACCTCCCGGTCTACTAATACTGATGGTGTGGCTGGAACCTGGGGTGTGTACAGCGAGCAATTCAGGCAATaGATATGTCACATCATTTTT +
Preference number: 4 (lower is better)
Translates to: TSRSTNTDGVAGTWGVYSEQFRQ*ICHIIF
Trigger: AAAAATGATGTGACATATCCATTGCCTGAATTGCTC...GCTGTACACACCCCAGGTTCCAGCCACACCATCAGTATTAGTAGACCGGGAGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR TCA 90 bp AAATCCACATGGAAGTGTGGTGGCTGCAAAACGAAGTTCACAGAATTTCAGGCAAGGTGTAGGCACTGTTaGGTATTCCAGGCTCTTTTC +
Preference number: 4 (lower is better)
Translates to: KSTWKCGGCKTKFTEFQARCRHC*VFQALF
Trigger: GAAAAGAGCCTGGAATACTCAACAGTGCCTACACCT...TGCCTGAAATTCTGTGAACTTCGTTTTGCAGCCACCACACTTCCATGTGGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341276.11
ENST00000622726.4
CDS-3UTR TCA 90 bp ACATGGAAGTGTGGTGGCTGCAAAACGAAGTTCACAGAATTTCAGGCAAAAACACCAGTGATCTGCTGTTaGCCTCTTTTGCTTCCATCG +
Preference number: 4 (lower is better)
Translates to: TWKCGGCKTKFTEFQAKTPVICC*PLLLPS
Trigger: CGATGGAAGCAAAAGAGGTCAACAGCAGATCACTGG...TGTTTTTGCCTGAAATTCTGTGAACTTCGTTTTGCAGCCACCACACTTCCATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR TCA 90 bp CAATTAGCCTCATCTTTGGCCAGTTTATTTGATCGTGCTTACAGACTGCTCCATCCAGTGATCTGCTGTTaGCCTCTTTTGCTTCCATCG +
Preference number: 4 (lower is better)
Translates to: QLASSLASLFDRAYRLLHPVICC*PLLLPS
Trigger: CGATGGAAGCAAAAGAGGTCAACAGCAGATCACTGG...ATGGAGCAGTCTGTAAGCACGATCAAATAAACTGGCCAAAGATGAGGCTAATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369207.3
CDS-3UTR TCA 90 bp AAATCCACATGGAAGTGTGGTGGCTGCAAAACGAAGTTCACAGAATTTCAGGCAGAGACATCTTGCCAGTaGTCTGCTGTTGACCTCTTT +
Preference number: 4 (lower is better)
Translates to: KSTWKCGGCKTKFTEFQAETSCQ*SAVDLF
Trigger: AAAGAGGTCAACAGCAGATCACTGGCAAGATGTCTC...TGCCTGAAATTCTGTGAACTTCGTTTTGCAGCCACCACACTTCCATGTGGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR TCA 90 bp ACAGGAGAGCTAATAGACAAACAAAATCCACATGGAAGTGTGGTGGCTGCAAAATGCTCCTGTTTCGGCTaGTTCCTCTACACCTTGTGT +
Preference number: 4 (lower is better)
Translates to: TGELIDKQNPHGSVVAAKCSCFG*FLYTLC
Trigger: ACACAAGGTGTAGAGGAATCAGCCGAAACAGGAGCA...TTTTGCAGCCACCACACTTCCATGTGGATTTTGTTTGTCTATTAGCTCTCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR TCA 90 bp GATGCTCTCACACTTCTACGTGAGGTTGGTTACAAAAATGTGTCAGTGCTTTTCTGCTCCTGTTTCGGCTaGTTCCTCTACACCTTGTGT +
Preference number: 4 (lower is better)
Translates to: DALTLLREVGYKNVSVLFCSCFG*FLYTLC
Trigger: ACACAAGGTGTAGAGGAATCAGCCGAAACAGGAGCA...GAAAAGCACTGACACATTTTTGTAACCAACCTCACGTAGAAGTGTGAGAGCATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR GCA 90 bp TTATTTCTGCTACTCCTCTGCTATAATCCCAACACTGGCTTACAAAAGAGCAATTACTCCATCGCCTGCTaGTTCAGCTTCTGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: LFLLLLCYNPNTGLQKSNYSIAC*FSFCSS
Trigger: GGAGCTGCAGAAGCTGAAGCAGCAGGCGATGGAGTA...ATTGCTCTTTTGTAAGCCAGTGTTGGGATTATAGCAGAGGAGTAGCAGAAATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR GCA 90 bp AAATCCACATGGAAGTGTGGTGGCTGCAAAACGAAGTTCACAGAATTTCAGGCATTTAGAAAAGCAGTTTaGCAGGTGCCCGTAGACGTC +
Preference number: 4 (lower is better)
Translates to: KSTWKCGGCKTKFTEFQAFRKAV*QVPVDV
Trigger: GACGTCTACGGGCACCTGGCAAACTGCTTTTCTAAA...TGCCTGAAATTCTGTGAACTTCGTTTTGCAGCCACCACACTTCCATGTGGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000341276.11
CDS-3UTR GCA 90 bp ACAGGAGAGCTAATAGACAAACAAAATCCACATGGAAGTGTGGTGGCTGCAAAACAGAATATGTCCACTTaGAGGGTTGGAAGCCCCAGT +
Preference number: 4 (lower is better)
Translates to: TGELIDKQNPHGSVVAAKQNMST*RVGSPS
Trigger: ACTGGGGCTTCCAACCCTGCAAGTGGACATATTCTG...TTTTGCAGCCACCACACTTCCATGTGGATTTTGTTTGTCTATTAGCTCTCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000341276.11
ENST00000622726.4
CDS-3UTR GCA 90 bp ACATGGAAGTGTGGTGGCTGCAAAACGAAGTTCACAGAATTTCAGGCAAAAACAACACCTGGAACCAAGTaGGTGATAGATGCTGTCCCA +
Preference number: 4 (lower is better)
Translates to: TWKCGGCKTKFTEFQAKTTPGTK*VIDAVP
Trigger: TGGGACAGCATCTATCACGCACTTGGTTCCAGGTGT...TGTTTTTGCCTGAAATTCTGTGAACTTCGTTTTGCAGCCACCACACTTCCATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR GCA 90 bp CAATTAGCCTCATCTTTGGCCAGTTTATTTGATCGTGCTTACAGACTGCTCCATACACCTGGAACCAAGTaGGTGATAGATGCTGTCCCA +
Preference number: 4 (lower is better)
Translates to: QLASSLASLFDRAYRLLHTPGTK*VIDAVP
Trigger: TGGGACAGCATCTATCACGCACTTGGTTCCAGGTGT...ATGGAGCAGTCTGTAAGCACGATCAAATAAACTGGCCAAAGATGAGGCTAATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369207.3
CDS-3UTR GCA 90 bp GATGCTCTCACACTTCTACGTGAGGTTGGTTACAAAAATGTGTCAGTGCTTTTCACACCTGGAACCAAGTaGGTGATAGATGCTGTCCCA +
Preference number: 4 (lower is better)
Translates to: DALTLLREVGYKNVSVLFTPGTK*VIDAVP
Trigger: TGGGACAGCATCTATCACGCACTTGGTTCCAGGTGT...GAAAAGCACTGACACATTTTTGTAACCAACCTCACGTAGAAGTGTGAGAGCATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR CCA 90 bp CATCTGTTCCCAGCACAGAGAGCTTCTAGGGTCATTAGGTTTTTGTTCTCAGAGGTTCTAGCCCCAGGTTaGCACAGATTTCCTGTATTA +
Preference number: 4 (lower is better)
Translates to: HLFPAQRASRVIRFLFSEVLAPG*HRFPVL
Trigger: TAATACAGGAAATCTGTGCCAACCTGGGGCTAGAAC...CTCTGAGAACAAAAACCTAATGACCCTAGAAGCTCTCTGTGCTGGGAACAGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR CCA 90 bp CCTGAAAAATGGACAGGAGAGCTAATAGACAAACAAAATCCACATGGAAGTGTGAGAGGAAACTCCATGTaGAGACACGGCGCCGTACTT +
Preference number: 4 (lower is better)
Translates to: PEKWTGELIDKQNPHGSVRGNSM*RHGAVL
Trigger: AAGTACGGCGCCGTGTCTCCACATGGAGTTTCCTCT...CACACTTCCATGTGGATTTTGTTTGTCTATTAGCTCTCCTGTCCATTTTTCAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR TCA 90 bp CATCTTTGGCCAGTTTATTTGATCGTGCTTACAGACTGCTCCATCACATATGTTGTTGTTGGCTGTTCCTaGTTGTGCTTCAGTAGAGCG +
Preference number: 4 (lower is better)
Translates to: HLWPVYLIVLTDCSITYVVVGCS*LCFSRA
Trigger: CGCTCTACTGAAGCACAATCAGGAACAGCCAACAAC...AACATATGTGATGGAGCAGTCTGTAAGCACGATCAAATAAACTGGCCAAAGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369207.3
CDS-3UTR TCA 90 bp TTATTTCTGCTACTCCTCTGCTATAATCCCAACACTGGCTTACAAAAGAGCAATATGACTTCCCACAGCTaGCCAGCGATACCATCAGCA +
Preference number: 4 (lower is better)
Translates to: LFLLLLCYNPNTGLQKSNMTSHS*PAIPSA
Trigger: TGCTGATGGTATCGCTGGTCAGCTGTGGGAAGTCAT...ATTGCTCTTTTGTAAGCCAGTGTTGGGATTATAGCAGAGGAGTAGCAGAAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341276.11
ENST00000622726.4
CDS-3UTR TCA 90 bp GATGCTCTCACACTTCTACGTGAGGTTGGTTACAAAAATGTGTCAGTGCTTTTCGAGACATCTTGCCAGTaGTCTGCTGTTGACCTCTTT +
Preference number: 4 (lower is better)
Translates to: DALTLLREVGYKNVSVLFETSCQ*SAVDLF
Trigger: AAAGAGGTCAACAGCAGATCACTGGCAAGATGTCTC...GAAAAGCACTGACACATTTTTGTAACCAACCTCACGTAGAAGTGTGAGAGCATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR TCA 90 bp CAATTAGCCTCATCTTTGGCCAGTTTATTTGATCGTGCTTACAGACTGCTCCATGAGACATCTTGCCAGTaGTCTGCTGTTGACCTCTTT +
Preference number: 4 (lower is better)
Translates to: QLASSLASLFDRAYRLLHETSCQ*SAVDLF
Trigger: AAAGAGGTCAACAGCAGATCACTGGCAAGATGTCTC...ATGGAGCAGTCTGTAAGCACGATCAAATAAACTGGCCAAAGATGAGGCTAATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369207.3
CDS-3UTR GCA 90 bp GAGTGTGGAGTTGGCAACAAAAATATTGGCCTCTTTTACTGGAGCGTGTCCCTGTATGGTGGGAGGCTTTaGAAGTTTAGAAAAGCAGTT +
Preference number: 4 (lower is better)
Translates to: ECGVGNKNIGLFYWSVSLYGGRL*KFRKAV
Trigger: AACTGCTTTTCTAAACTTGCAAAGCCTCCCACCATA...CAGGGACACGCTCCAGTAAAAGAGGCCAATATTTTTGTTGCCAACTCCACACTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341276.11
ENST00000622726.4
CDS-3UTR GCA 90 bp CCTGAAAAATGGACAGGAGAGCTAATAGACAAACAAAATCCACATGGAAGTGTGCAGAATATGTCCACTTaGAGGGTTGGAAGCCCCAGT +
Preference number: 4 (lower is better)
Translates to: PEKWTGELIDKQNPHGSVQNMST*RVGSPS
Trigger: ACTGGGGCTTCCAACCCTGCAAGTGGACATATTCTG...CACACTTCCATGTGGATTTTGTTTGTCTATTAGCTCTCCTGTCCATTTTTCAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341276.11
ENST00000622726.4
CDS-3UTR GCA 90 bp TTAGCCTCATCTTTGGCCAGTTTATTTGATCGTGCTTACAGACTGCTCCATCACGTCAACCATCTCCGCTaGATTTTTGTATGTGCCCAT +
Preference number: 4 (lower is better)
Translates to: LASSLASLFDRAYRLLHHVNHLR*IFVCAH
Trigger: ATGGGCACATACAAAAATGCAGCGGAGATGGTTGAC...GTGATGGAGCAGTCTGTAAGCACGATCAAATAAACTGGCCAAAGATGAGGCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369207.3
CDS-3UTR GCA 90 bp ACATGGAAGTGTGGTGGCTGCAAAACGAAGTTCACAGAATTTCAGGCAAAAACACAAGTGCGTGATAGATaGTGTCCCACTGTTCAGAGT +
Preference number: 4 (lower is better)
Translates to: TWKCGGCKTKFTEFQAKTQVRDR*CPTVQS
Trigger: ACTCTGAACAGTGGGACAGCATCTATCACGCACTTG...TGTTTTTGCCTGAAATTCTGTGAACTTCGTTTTGCAGCCACCACACTTCCATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR GCA 90 bp ACAGGAGAGCTAATAGACAAACAAAATCCACATGGAAGTGTGGTGGCTGCAAAACAAGTGCGTGATAGATaGTGTCCCACTGTTCAGAGT +
Preference number: 4 (lower is better)
Translates to: TGELIDKQNPHGSVVAAKQVRDR*CPTVQS
Trigger: ACTCTGAACAGTGGGACAGCATCTATCACGCACTTG...TTTTGCAGCCACCACACTTCCATGTGGATTTTGTTTGTCTATTAGCTCTCCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR GCA 90 bp GAGTGTGGAGTTGGCAACAAAAATATTGGCCTCTTTTACTGGAGCGTGTCCCTGTTTGGAAGCAGTTCCTaGAATTATGTAACACCTGGA +
Preference number: 4 (lower is better)
Translates to: ECGVGNKNIGLFYWSVSLFGSSS*NYVTPG
Trigger: TCCAGGTGTTACATAATTGCAGGAACTGCTTCCAAA...CAGGGACACGCTCCAGTAAAAGAGGCCAATATTTTTGTTGCCAACTCCACACTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR GCA 90 bp CATCTGTTCCCAGCACAGAGAGCTTCTAGGGTCATTAGGTTTTTGTTCTCAGAGTTTAGAAAAGCAGTTTaGTTTCAGGTGCCCGTAGAC +
Preference number: 4 (lower is better)
Translates to: HLFPAQRASRVIRFLFSEFRKAV*FQVPVD
Trigger: GTCTACGGGCACCTGAAAGCAAACTGCTTTTCTAAA...CTCTGAGAACAAAAACCTAATGACCCTAGAAGCTCTCTGTGCTGGGAACAGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000622726.4
CDS-3UTR CCA 90 bp GGAGAAGCAAATGGTAACCATTTTAACGAGACCCTAAATCATATAAAGTGGTTGGCATGGCACAGGCTTTaGCAACAGCTAGTGACACGG +
Preference number: 4 (lower is better)
Translates to: GEANGNHFNETLNHIKWLAWHRL*QQLVTR
Trigger: CCGTGTCACTAGCTGTTGCCAAAGCCTGTGCCATGC...CAACCACTTTATATGATTTAGGGTCTCGTTAAAATGGTTACCATTTGCTTCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341276.11
ENST00000622726.4
CDS-3UTR CCA 90 bp CACATGGAAGTGTGGTGGCTGCAAAACGAAGTTCACAGAATTTCAGGCAAAAACATCCACATGGAAGTGTaGTGGCTGCAAAACGAAGTT +
Preference number: 4 (lower is better)
Translates to: HMEVWWLQNEVHRISGKNIHMEV*WLQNEV
Trigger: AACTTCGTTTTGCAGCCACCACACTTCCATGTGGAT...GTTTTTGCCTGAAATTCTGTGAACTTCGTTTTGCAGCCACCACACTTCCATGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR CCA 90 bp AAATCCACATGGAAGTGTGGTGGCTGCAAAACGAAGTTCACAGAATTTCAGGCAATCCACATGGAAGTGTaGTGGCTGCAAAACGAAGTT +
Preference number: 4 (lower is better)
Translates to: KSTWKCGGCKTKFTEFQAIHMEV*WLQNEV
Trigger: AACTTCGTTTTGCAGCCACCACACTTCCATGTGGAT...TGCCTGAAATTCTGTGAACTTCGTTTTGCAGCCACCACACTTCCATGTGGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR CCA 90 bp AGGATGGGGTGTTTGACTGAGTGTGGAGTTGGCAACAAAAATATTGGCCTCTTTCGTGTCCCTGAAAAATaGACAGGAGAGCTAATAGAC +
Preference number: 4 (lower is better)
Translates to: RMGCLTECGVGNKNIGLFRVPEK*TGELID
Trigger: GTCTATTAGCTCTCCTGTCCATTTTTCAGGGACACG...AAAGAGGCCAATATTTTTGTTGCCAACTCCACACTCAGTCAAACACCCCATCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR CCA 90 bp CATCTTTGGCCAGTTTATTTGATCGTGCTTACAGACTGCTCCATCACATATGTTCTTGCCCTCCAATCCTaGCATCACAGCTTGAAGATG +
Preference number: 4 (lower is better)
Translates to: HLWPVYLIVLTDCSITYVLALQS*HHSLKM
Trigger: CATCTTCAAGCTGTGATGCCAGGATTGGAGGGCAAG...AACATATGTGATGGAGCAGTCTGTAAGCACGATCAAATAAACTGGCCAAAGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369207.3
CDS-3UTR TCA 90 bp TTATTTCTGCTACTCCTCTGCTATAATCCCAACACTGGCTTACAAAAGAGCAATGTTGTTGGCTGTTCCTaGTTGTGCTTCAGTAGAGCG +
Preference number: 4 (lower is better)
Translates to: LFLLLLCYNPNTGLQKSNVVGCS*LCFSRA
Trigger: CGCTCTACTGAAGCACAATCAGGAACAGCCAACAAC...ATTGCTCTTTTGTAAGCCAGTGTTGGGATTATAGCAGAGGAGTAGCAGAAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341276.11
ENST00000622726.4
CDS-3UTR TCA 90 bp CAATTAGCCTCATCTTTGGCCAGTTTATTTGATCGTGCTTACAGACTGCTCCATGTTAAACAGCCAAGATaGGACATCTTGCCAGTGATC +
Preference number: 4 (lower is better)
Translates to: QLASSLASLFDRAYRLLHVKQPR*DILPVI
Trigger: GATCACTGGCAAGATGTCTCATCTTGGCTGTTTAAC...ATGGAGCAGTCTGTAAGCACGATCAAATAAACTGGCCAAAGATGAGGCTAATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369207.3
CDS-3UTR TCA 90 bp ACATGGAAGTGTGGTGGCTGCAAAACGAAGTTCACAGAATTTCAGGCAAAAACAGTTAAACAGCCAAGATaGGACATCTTGCCAGTGATC +
Preference number: 4 (lower is better)
Translates to: TWKCGGCKTKFTEFQAKTVKQPR*DILPVI
Trigger: GATCACTGGCAAGATGTCTCATCTTGGCTGTTTAAC...TGTTTTTGCCTGAAATTCTGTGAACTTCGTTTTGCAGCCACCACACTTCCATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR TCA 90 bp ACAGGAGAGCTAATAGACAAACAAAATCCACATGGAAGTGTGGTGGCTGCAAAAGTTAAACAGCCAAGATaGGACATCTTGCCAGTGATC +
Preference number: 4 (lower is better)
Translates to: TGELIDKQNPHGSVVAAKVKQPR*DILPVI
Trigger: GATCACTGGCAAGATGTCTCATCTTGGCTGTTTAAC...TTTTGCAGCCACCACACTTCCATGTGGATTTTGTTTGTCTATTAGCTCTCCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR TCA 90 bp TTAGCCTCATCTTTGGCCAGTTTATTTGATCGTGCTTACAGACTGCTCCATCACTTGAAGGGTACTTGTTaGTCAGATCCACATACAGGT +
Preference number: 4 (lower is better)
Translates to: LASSLASLFDRAYRLLHHLKGTC*SDPHTG
Trigger: ACCTGTATGTGGATCTGATCAACAAGTACCCTTCAA...GTGATGGAGCAGTCTGTAAGCACGATCAAATAAACTGGCCAAAGATGAGGCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369207.3
CDS-3UTR TCA 90 bp TTAGCCTCATCTTTGGCCAGTTTATTTGATCGTGCTTACAGACTGCTCCATCACGGTTTGTGTGTTTTATaGTCAGCCCATTGGATTTGG +
Preference number: 4 (lower is better)
Translates to: LASSLASLFDRAYRLLHHGLCVL*SAHWIW
Trigger: CCAAATCCAATGGGCTGATCATAAAACACACAAACC...GTGATGGAGCAGTCTGTAAGCACGATCAAATAAACTGGCCAAAGATGAGGCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369207.3
CDS-3UTR TCA 90 bp AAATCCACATGGAAGTGTGGTGGCTGCAAAACGAAGTTCACAGAATTTCAGGCAGGTTTGTGTGTTTTATaGTCAGCCCATTGGATTTGG +
Preference number: 4 (lower is better)
Translates to: KSTWKCGGCKTKFTEFQAGLCVL*SAHWIW
Trigger: CCAAATCCAATGGGCTGATCATAAAACACACAAACC...TGCCTGAAATTCTGTGAACTTCGTTTTGCAGCCACCACACTTCCATGTGGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR TCA 90 bp CATCTGTTCCCAGCACAGAGAGCTTCTAGGGTCATTAGGTTTTTGTTCTCAGAGAAGTGTGTTCTTCTTTaGAACCCAGTGTTCCATTCT +
Preference number: 4 (lower is better)
Translates to: HLFPAQRASRVIRFLFSEKCVLL*NPVFHS
Trigger: AGAATGGAACACTGGGTTTCAAAGAAGAACACACTT...CTCTGAGAACAAAAACCTAATGACCCTAGAAGCTCTCTGTGCTGGGAACAGATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR TCA 90 bp CACATGGAAGTGTGGTGGCTGCAAAACGAAGTTCACAGAATTTCAGGCAAAAACTCAAGGGTAGGAAAGTaGGATGAAATTGGCTCTTAC +
Preference number: 4 (lower is better)
Translates to: HMEVWWLQNEVHRISGKNSRVGK*DEIGSY
Trigger: GTAAGAGCCAATTTCATCTCACTTTCCTACCCTTGA...GTTTTTGCCTGAAATTCTGTGAACTTCGTTTTGCAGCCACCACACTTCCATGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR GCA 90 bp TATATTTATTTCTGCTACTCCTCTGCTATAATCCCAACACTGGCTTACAAAAGATGCTGCTTCAGCTTCTaGAGCTCCCTAGTGGTCCCA +
Preference number: 4 (lower is better)
Translates to: YIYFCYSSAIIPTLAYKRCCFSF*SSLVVP
Trigger: TGGGACCACTAGGGAGCTGCAGAAGCTGAAGCAGCA...TCTTTTGTAAGCCAGTGTTGGGATTATAGCAGAGGAGTAGCAGAAATAAATATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR GCA 90 bp CATCTGTTCCCAGCACAGAGAGCTTCTAGGGTCATTAGGTTTTTGTTCTCAGAGCAGTTGATAGCTAGATaGAGATTTGTTCCCAGTTCT +
Preference number: 4 (lower is better)
Translates to: HLFPAQRASRVIRFLFSEQLIAR*RFVPSS
Trigger: AGAACTGGGAACAAATCTGCATCTAGCTATCAACTG...CTCTGAGAACAAAAACCTAATGACCCTAGAAGCTCTCTGTGCTGGGAACAGATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR GCA 90 bp CATCTTTGGCCAGTTTATTTGATCGTGCTTACAGACTGCTCCATCACATATGTTCAAGTGCGTGATAGATaGTGTCCCACTGTTCAGAGT +
Preference number: 4 (lower is better)
Translates to: HLWPVYLIVLTDCSITYVQVRDR*CPTVQS
Trigger: ACTCTGAACAGTGGGACAGCATCTATCACGCACTTG...AACATATGTGATGGAGCAGTCTGTAAGCACGATCAAATAAACTGGCCAAAGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369207.3
CDS-3UTR GCA 90 bp ACATGGAAGTGTGGTGGCTGCAAAACGAAGTTCACAGAATTTCAGGCAAAAACATGGAAGTGTGGTGGCTaGAAAACGAAGTTCACAGAA +
Preference number: 4 (lower is better)
Translates to: TWKCGGCKTKFTEFQAKTWKCGG*KTKFTE
Trigger: TTCTGTGAACTTCGTTTTGCAGCCACCACACTTCCA...TGTTTTTGCCTGAAATTCTGTGAACTTCGTTTTGCAGCCACCACACTTCCATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR CCA 90 bp CACATGGAAGTGTGGTGGCTGCAAAACGAAGTTCACAGAATTTCAGGCAAAAACTCTCGACACCTTGTTTaGTTGTTAATTCAGGATGGG +
Preference number: 4 (lower is better)
Translates to: HMEVWWLQNEVHRISGKNSRHLV*LLIQDG
Trigger: CCCATCCTGAATTAACAACCAAACAAGGTGTCGAGA...GTTTTTGCCTGAAATTCTGTGAACTTCGTTTTGCAGCCACCACACTTCCATGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341276.11
ENST00000622726.4
CDS-3UTR CCA 90 bp AAATCCACATGGAAGTGTGGTGGCTGCAAAACGAAGTTCACAGAATTTCAGGCATCTCGACACCTTGTTTaGTTGTTAATTCAGGATGGG +
Preference number: 4 (lower is better)
Translates to: KSTWKCGGCKTKFTEFQASRHLV*LLIQDG
Trigger: CCCATCCTGAATTAACAACCAAACAAGGTGTCGAGA...TGCCTGAAATTCTGTGAACTTCGTTTTGCAGCCACCACACTTCCATGTGGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341276.11
ENST00000622726.4
CDS-3UTR CCA 90 bp CCTCATCTTTGGCCAGTTTATTTGATCGTGCTTACAGACTGCTCCATCACATATGTTCTAGCCCCAGGTTaGCACAGATTTCCTGTATTA +
Preference number: 4 (lower is better)
Translates to: PHLWPVYLIVLTDCSITYVLAPG*HRFPVL
Trigger: TAATACAGGAAATCTGTGCCAACCTGGGGCTAGAAC...ATATGTGATGGAGCAGTCTGTAAGCACGATCAAATAAACTGGCCAAAGATGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369207.3
CDS-3UTR CCA 90 bp CATCTGTTCCCAGCACAGAGAGCTTCTAGGGTCATTAGGTTTTTGTTCTCAGAGCAATTATGTAACACCTaGAACCAAGTGCGTGATAGA +
Preference number: 4 (lower is better)
Translates to: HLFPAQRASRVIRFLFSEQLCNT*NQVRDR
Trigger: TCTATCACGCACTTGGTTCCAGGTGTTACATAATTG...CTCTGAGAACAAAAACCTAATGACCCTAGAAGCTCTCTGTGCTGGGAACAGATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR CCA 90 bp GAGTGTGGAGTTGGCAACAAAAATATTGGCCTCTTTTACTGGAGCGTGTCCCTGTACTGTCAATCAGATTaGTTATTTCCACCAAGTCAG +
Preference number: 4 (lower is better)
Translates to: ECGVGNKNIGLFYWSVSLYCQSD*LFPPSQ
Trigger: CTGACTTGGTGGAAATAACCAATCTGATTGACAGTA...CAGGGACACGCTCCAGTAAAAGAGGCCAATATTTTTGTTGCCAACTCCACACTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR CCA 90 bp CACATGGAAGTGTGGTGGCTGCAAAACGAAGTTCACAGAATTTCAGGCAAAAACCAAACAAAATCCACATaGAAGTGTGGTGGCTGCAAA +
Preference number: 4 (lower is better)
Translates to: HMEVWWLQNEVHRISGKNQTKST*KCGGCK
Trigger: TTTGCAGCCACCACACTTCCATGTGGATTTTGTTTG...GTTTTTGCCTGAAATTCTGTGAACTTCGTTTTGCAGCCACCACACTTCCATGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR CCA 90 bp CACATGGAAGTGTGGTGGCTGCAAAACGAAGTTCACAGAATTTCAGGCAAAAACATTGGCCTCTTTTACTaGAGCGTGTCCCTGAAAAAT +
Preference number: 4 (lower is better)
Translates to: HMEVWWLQNEVHRISGKNIGLFY*SVSLKN
Trigger: ATTTTTCAGGGACACGCTCCAGTAAAAGAGGCCAAT...GTTTTTGCCTGAAATTCTGTGAACTTCGTTTTGCAGCCACCACACTTCCATGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR CCA 90 bp CATCTGTTCCCAGCACAGAGAGCTTCTAGGGTCATTAGGTTTTTGTTCTCAGAGAATAAACACAGAAGATaGACATCTGTTCCCAGCACA +
Preference number: 4 (lower is better)
Translates to: HLFPAQRASRVIRFLFSENKHRR*TSVPST
Trigger: TGTGCTGGGAACAGATGTCCATCTTCTGTGTTTATT...CTCTGAGAACAAAAACCTAATGACCCTAGAAGCTCTCTGTGCTGGGAACAGATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR TCA 90 bp GATGCTCTCACACTTCTACGTGAGGTTGGTTACAAAAATGTGTCAGTGCTTTTCTCATGGACTTCAAAATaGGTCGAGATCACCACAGAA +
Preference number: 4 (lower is better)
Translates to: DALTLLREVGYKNVSVLFSWTSK*VEITTE
Trigger: TTCTGTGGTGATCTCGACTCATTTTGAAGTCCATGA...GAAAAGCACTGACACATTTTTGTAACCAACCTCACGTAGAAGTGTGAGAGCATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341276.11
ENST00000622726.4
CDS-3UTR TCA 90 bp TCATCTTTGGCCAGTTTATTTGATCGTGCTTACAGACTGCTCCATCACATATGTCAGAGTCCTCCTTCCTaGAAGGATCAATTAAGGCAA +
Preference number: 4 (lower is better)
Translates to: SSLASLFDRAYRLLHHICQSPPS*KDQLRQ
Trigger: TTGCCTTAATTGATCCTTTCAGGAAGGAGGACTCTG...ACATATGTGATGGAGCAGTCTGTAAGCACGATCAAATAAACTGGCCAAAGATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369207.3
CDS-3UTR TCA 90 bp CATCTTTGGCCAGTTTATTTGATCGTGCTTACAGACTGCTCCATCACATATGTTTGGATTTGGGGATGCTaGTGTTTCCTTGCTCTAGAA +
Preference number: 4 (lower is better)
Translates to: HLWPVYLIVLTDCSITYVWIWGC*CFLALE
Trigger: TTCTAGAGCAAGGAAACATCAGCATCCCCAAATCCA...AACATATGTGATGGAGCAGTCTGTAAGCACGATCAAATAAACTGGCCAAAGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369207.3
CDS-3UTR TCA 90 bp GATGCTCTCACACTTCTACGTGAGGTTGGTTACAAAAATGTGTCAGTGCTTTTCGGTTTGTGTGTTTTATaGTCAGCCCATTGGATTTGG +
Preference number: 4 (lower is better)
Translates to: DALTLLREVGYKNVSVLFGLCVL*SAHWIW
Trigger: CCAAATCCAATGGGCTGATCATAAAACACACAAACC...GAAAAGCACTGACACATTTTTGTAACCAACCTCACGTAGAAGTGTGAGAGCATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR TCA 90 bp GATGCTCTCACACTTCTACGTGAGGTTGGTTACAAAAATGTGTCAGTGCTTTTCTCAAGGGTAGGAAAGTaGGATGAAATTGGCTCTTAC +
Preference number: 4 (lower is better)
Translates to: DALTLLREVGYKNVSVLFSRVGK*DEIGSY
Trigger: GTAAGAGCCAATTTCATCTCACTTTCCTACCCTTGA...GAAAAGCACTGACACATTTTTGTAACCAACCTCACGTAGAAGTGTGAGAGCATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR TCA 90 bp CAATTAGCCTCATCTTTGGCCAGTTTATTTGATCGTGCTTACAGACTGCTCCATTTTGGCCAGTTTATTTaGTCGTGCTTACAGACTGCT +
Preference number: 4 (lower is better)
Translates to: QLASSLASLFDRAYRLLHFGQFI*SCLQTA
Trigger: AGCAGTCTGTAAGCACGATCAAATAAACTGGCCAAA...ATGGAGCAGTCTGTAAGCACGATCAAATAAACTGGCCAAAGATGAGGCTAATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369207.3
CDS-3UTR GCA 90 bp TCATCTTTGGCCAGTTTATTTGATCGTGCTTACAGACTGCTCCATCACATATGTGCTGTTGACCTCTTTTaGTTCCATCGTGCCCTTTTT +
Preference number: 4 (lower is better)
Translates to: SSLASLFDRAYRLLHHICAVDLF*FHRALF
Trigger: AAAAAGGGCACGATGGAAGCAAAAGAGGTCAACAGC...ACATATGTGATGGAGCAGTCTGTAAGCACGATCAAATAAACTGGCCAAAGATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369207.3
CDS-3UTR GCA 90 bp AAATCCACATGGAAGTGTGGTGGCTGCAAAACGAAGTTCACAGAATTTCAGGCATTTGGAAGCAGTTCCTaGAATTATGTAACACCTGGA +
Preference number: 4 (lower is better)
Translates to: KSTWKCGGCKTKFTEFQAFGSSS*NYVTPG
Trigger: TCCAGGTGTTACATAATTGCAGGAACTGCTTCCAAA...TGCCTGAAATTCTGTGAACTTCGTTTTGCAGCCACCACACTTCCATGTGGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR GCA 90 bp AGGATGGGGTGTTTGACTGAGTGTGGAGTTGGCAACAAAAATATTGGCCTCTTTCCAAAGACAGTGATGTaGTTCTTACTGTCAATCAGA +
Preference number: 4 (lower is better)
Translates to: RMGCLTECGVGNKNIGLFPKTVM*FLLSIR
Trigger: TCTGATTGACAGTAAGAAGCACATCACTGTCTTTGG...AAAGAGGCCAATATTTTTGTTGCCAACTCCACACTCAGTCAAACACCCCATCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR CCA 90 bp CATCTGTTCCCAGCACAGAGAGCTTCTAGGGTCATTAGGTTTTTGTTCTCAGAGTGGGAAAGTTTTGAATaGTGCAGAATATGTCCACTT +
Preference number: 4 (lower is better)
Translates to: HLFPAQRASRVIRFLFSEWESFE*CRICPL
Trigger: AAGTGGACATATTCTGCACCATTCAAAACTTTCCCA...CTCTGAGAACAAAAACCTAATGACCCTAGAAGCTCTCTGTGCTGGGAACAGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341276.11
ENST00000622726.4
CDS-3UTR CCA 90 bp CCTCATCTTTGGCCAGTTTATTTGATCGTGCTTACAGACTGCTCCATCACATATTCTCGACACCTTGTTTaGTTGTTAATTCAGGATGGG +
Preference number: 4 (lower is better)
Translates to: PHLWPVYLIVLTDCSITYSRHLV*LLIQDG
Trigger: CCCATCCTGAATTAACAACCAAACAAGGTGTCGAGA...ATATGTGATGGAGCAGTCTGTAAGCACGATCAAATAAACTGGCCAAAGATGAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369207.3
CDS-3UTR CCA 90 bp AAATCCACATGGAAGTGTGGTGGCTGCAAAACGAAGTTCACAGAATTTCAGGCACAATTATGTAACACCTaGAACCAAGTGCGTGATAGA +
Preference number: 4 (lower is better)
Translates to: KSTWKCGGCKTKFTEFQAQLCNT*NQVRDR
Trigger: TCTATCACGCACTTGGTTCCAGGTGTTACATAATTG...TGCCTGAAATTCTGTGAACTTCGTTTTGCAGCCACCACACTTCCATGTGGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR CCA 90 bp TTATTTCTGCTACTCCTCTGCTATAATCCCAACACTGGCTTACAAAAGAGCAATCACATGGAAGTGTGGTaGCTGCAAAACGAAGTTCAC +
Preference number: 4 (lower is better)
Translates to: LFLLLLCYNPNTGLQKSNHMEVW*LQNEVH
Trigger: GTGAACTTCGTTTTGCAGCCACCACACTTCCATGTG...ATTGCTCTTTTGTAAGCCAGTGTTGGGATTATAGCAGAGGAGTAGCAGAAATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR CCA 90 bp CCTGAAAAATGGACAGGAGAGCTAATAGACAAACAAAATCCACATGGAAGTGTGCGTGTCCCTGAAAAATaGACAGGAGAGCTAATAGAC +
Preference number: 4 (lower is better)
Translates to: PEKWTGELIDKQNPHGSVRVPEK*TGELID
Trigger: GTCTATTAGCTCTCCTGTCCATTTTTCAGGGACACG...CACACTTCCATGTGGATTTTGTTTGTCTATTAGCTCTCCTGTCCATTTTTCAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR TCA 90 bp TATATTTATTTCTGCTACTCCTCTGCTATAATCCCAACACTGGCTTACAAAAGAAATATCCTGAGTAGGTaGTCCACCTCTGCCTGGTCA +
Preference number: 4 (lower is better)
Translates to: YIYFCYSSAIIPTLAYKRNILSR*STSAWS
Trigger: TGACCAGGCAGAGGTGGATCACCTACTCAGGATATT...TCTTTTGTAAGCCAGTGTTGGGATTATAGCAGAGGAGTAGCAGAAATAAATATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341276.11
ENST00000622726.4
CDS-3UTR TCA 90 bp CAATTAGCCTCATCTTTGGCCAGTTTATTTGATCGTGCTTACAGACTGCTCCATTACTTCCAAAGACAGTaGTGTGCTTCTTACTGTCAA +
Preference number: 4 (lower is better)
Translates to: QLASSLASLFDRAYRLLHYFQRQ*CASYCQ
Trigger: TTGACAGTAAGAAGCACATCACTGTCTTTGGAAGTA...ATGGAGCAGTCTGTAAGCACGATCAAATAAACTGGCCAAAGATGAGGCTAATTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369207.3
CDS-3UTR TCA 90 bp GATGCTCTCACACTTCTACGTGAGGTTGGTTACAAAAATGTGTCAGTGCTTTTCTACTTCCAAAGACAGTaGTGTGCTTCTTACTGTCAA +
Preference number: 4 (lower is better)
Translates to: DALTLLREVGYKNVSVLFYFQRQ*CASYCQ
Trigger: TTGACAGTAAGAAGCACATCACTGTCTTTGGAAGTA...GAAAAGCACTGACACATTTTTGTAACCAACCTCACGTAGAAGTGTGAGAGCATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR TCA 90 bp ACATGGAAGTGTGGTGGCTGCAAAACGAAGTTCACAGAATTTCAGGCAAAAACAAAGTGTGTTCTTCTTTaGAACCCAGTGTTCCATTCT +
Preference number: 4 (lower is better)
Translates to: TWKCGGCKTKFTEFQAKTKCVLL*NPVFHS
Trigger: AGAATGGAACACTGGGTTTCAAAGAAGAACACACTT...TGTTTTTGCCTGAAATTCTGTGAACTTCGTTTTGCAGCCACCACACTTCCATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR TCA 90 bp AAATCCACATGGAAGTGTGGTGGCTGCAAAACGAAGTTCACAGAATTTCAGGCAGGTAGGAAAGTGAGATaGAATTGGCTCTTACAAAAA +
Preference number: 4 (lower is better)
Translates to: KSTWKCGGCKTKFTEFQAGRKVR*NWLLQK
Trigger: TTTTTGTAAGAGCCAATTTCATCTCACTTTCCTACC...TGCCTGAAATTCTGTGAACTTCGTTTTGCAGCCACCACACTTCCATGTGGATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR GCA 90 bp CCTCATCTTTGGCCAGTTTATTTGATCGTGCTTACAGACTGCTCCATCACATATTTTGGAAGCAGTTCCTaGAATTATGTAACACCTGGA +
Preference number: 4 (lower is better)
Translates to: PHLWPVYLIVLTDCSITYFGSSS*NYVTPG
Trigger: TCCAGGTGTTACATAATTGCAGGAACTGCTTCCAAA...ATATGTGATGGAGCAGTCTGTAAGCACGATCAAATAAACTGGCCAAAGATGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369207.3
CDS-3UTR CCA 90 bp AAATCCACATGGAAGTGTGGTGGCTGCAAAACGAAGTTCACAGAATTTCAGGCATGGGAAAGTTTTGAATaGTGCAGAATATGTCCACTT +
Preference number: 4 (lower is better)
Translates to: KSTWKCGGCKTKFTEFQAWESFE*CRICPL
Trigger: AAGTGGACATATTCTGCACCATTCAAAACTTTCCCA...TGCCTGAAATTCTGTGAACTTCGTTTTGCAGCCACCACACTTCCATGTGGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341276.11
ENST00000622726.4
CDS-3UTR CCA 90 bp CATCTGTTCCCAGCACAGAGAGCTTCTAGGGTCATTAGGTTTTTGTTCTCAGAGGAGCAATTCAGGCAATaGATATGTCACATCATTTTT +
Preference number: 4 (lower is better)
Translates to: HLFPAQRASRVIRFLFSEEQFRQ*ICHIIF
Trigger: AAAAATGATGTGACATATCCATTGCCTGAATTGCTC...CTCTGAGAACAAAAACCTAATGACCCTAGAAGCTCTCTGTGCTGGGAACAGATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR TCA 90 bp GGAGAAGCAAATGGTAACCATTTTAACGAGACCCTAAATCATATAAAGTGGTTGCAGAGTCCTCCTTCCTaGAAGGATCAATTAAGGCAA +
Preference number: 4 (lower is better)
Translates to: GEANGNHFNETLNHIKWLQSPPS*KDQLRQ
Trigger: TTGCCTTAATTGATCCTTTCAGGAAGGAGGACTCTG...CAACCACTTTATATGATTTAGGGTCTCGTTAAAATGGTTACCATTTGCTTCTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341276.11
ENST00000622726.4
CDS-3UTR TCA 90 bp CCTGAAAAATGGACAGGAGAGCTAATAGACAAACAAAATCCACATGGAAGTGTGAAGTGTGTTCTTCTTTaGAACCCAGTGTTCCATTCT +
Preference number: 4 (lower is better)
Translates to: PEKWTGELIDKQNPHGSVKCVLL*NPVFHS
Trigger: AGAATGGAACACTGGGTTTCAAAGAAGAACACACTT...CACACTTCCATGTGGATTTTGTTTGTCTATTAGCTCTCCTGTCCATTTTTCAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR GCA 90 bp CATCTTTGGCCAGTTTATTTGATCGTGCTTACAGACTGCTCCATCACATATGTTCAGTTGATAGCTAGATaGAGATTTGTTCCCAGTTCT +
Preference number: 4 (lower is better)
Translates to: HLWPVYLIVLTDCSITYVQLIAR*RFVPSS
Trigger: AGAACTGGGAACAAATCTGCATCTAGCTATCAACTG...AACATATGTGATGGAGCAGTCTGTAAGCACGATCAAATAAACTGGCCAAAGATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369207.3
CDS-3UTR GCA 90 bp GGAGAAGCAAATGGTAACCATTTTAACGAGACCCTAAATCATATAAAGTGGTTGGTCAACCATCTCCGCTaGATTTTTGTATGTGCCCAT +
Preference number: 4 (lower is better)
Translates to: GEANGNHFNETLNHIKWLVNHLR*IFVCAH
Trigger: ATGGGCACATACAAAAATGCAGCGGAGATGGTTGAC...CAACCACTTTATATGATTTAGGGTCTCGTTAAAATGGTTACCATTTGCTTCTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341276.11
ENST00000622726.4
CDS-3UTR GCA 90 bp AAATCCACATGGAAGTGTGGTGGCTGCAAAACGAAGTTCACAGAATTTCAGGCAATGCTGATGTTTCCTTaGTCTAGAAGTTTAGAAATG +
Preference number: 4 (lower is better)
Translates to: KSTWKCGGCKTKFTEFQAMLMFP*SRSLEM
Trigger: CATTTCTAAACTTCTAGAGCAAGGAAACATCAGCAT...TGCCTGAAATTCTGTGAACTTCGTTTTGCAGCCACCACACTTCCATGTGGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR GCA 90 bp CATCTTTGGCCAGTTTATTTGATCGTGCTTACAGACTGCTCCATCACATATGTTCCAAAGACAGTGATGTaGTTCTTACTGTCAATCAGA +
Preference number: 4 (lower is better)
Translates to: HLWPVYLIVLTDCSITYVPKTVM*FLLSIR
Trigger: TCTGATTGACAGTAAGAAGCACATCACTGTCTTTGG...AACATATGTGATGGAGCAGTCTGTAAGCACGATCAAATAAACTGGCCAAAGATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369207.3
CDS-3UTR GCA 90 bp CCTCATCTTTGGCCAGTTTATTTGATCGTGCTTACAGACTGCTCCATCACATATATCGTGCTTACAGACTaGTCCATCACATATGTTAAT +
Preference number: 4 (lower is better)
Translates to: PHLWPVYLIVLTDCSITYIVLTD*SITYVN
Trigger: ATTAACATATGTGATGGAGCAGTCTGTAAGCACGAT...ATATGTGATGGAGCAGTCTGTAAGCACGATCAAATAAACTGGCCAAAGATGAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369207.3
CDS-3UTR CCA 90 bp CCTGAAAAATGGACAGGAGAGCTAATAGACAAACAAAATCCACATGGAAGTGTGCAGAACATACGTTCTTaGGAAAGTTTTGAATGGTGC +
Preference number: 4 (lower is better)
Translates to: PEKWTGELIDKQNPHGSVQNIRS*ESFEWC
Trigger: GCACCATTCAAAACTTTCCCAAGAACGTATGTTCTG...CACACTTCCATGTGGATTTTGTTTGTCTATTAGCTCTCCTGTCCATTTTTCAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341276.11
ENST00000622726.4
CDS-3UTR CCA 90 bp TTAGCCTCATCTTTGGCCAGTTTATTTGATCGTGCTTACAGACTGCTCCATCACGTTGTTAATTCAGGATaGGGTATACAAATCACTTCT +
Preference number: 4 (lower is better)
Translates to: LASSLASLFDRAYRLLHHVVNSG*GIQITS
Trigger: AGAAGTGATTTGTATACCCCATCCTGAATTAACAAC...GTGATGGAGCAGTCTGTAAGCACGATCAAATAAACTGGCCAAAGATGAGGCTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369207.3
CDS-3UTR CCA 90 bp AAATCCACATGGAAGTGTGGTGGCTGCAAAACGAAGTTCACAGAATTTCAGGCAGTTGTTAATTCAGGATaGGGTATACAAATCACTTCT +
Preference number: 4 (lower is better)
Translates to: KSTWKCGGCKTKFTEFQAVVNSG*GIQITS
Trigger: AGAAGTGATTTGTATACCCCATCCTGAATTAACAAC...TGCCTGAAATTCTGTGAACTTCGTTTTGCAGCCACCACACTTCCATGTGGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341276.11
ENST00000622726.4
CDS-3UTR CCA 90 bp TCATCTTTGGCCAGTTTATTTGATCGTGCTTACAGACTGCTCCATCACATATGTCAATTATGTAACACCTaGAACCAAGTGCGTGATAGA +
Preference number: 4 (lower is better)
Translates to: SSLASLFDRAYRLLHHICQLCNT*NQVRDR
Trigger: TCTATCACGCACTTGGTTCCAGGTGTTACATAATTG...ACATATGTGATGGAGCAGTCTGTAAGCACGATCAAATAAACTGGCCAAAGATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369207.3
CDS-3UTR CCA 90 bp GATGCTCTCACACTTCTACGTGAGGTTGGTTACAAAAATGTGTCAGTGCTTTTCTACTGTCAATCAGATTaGTTATTTCCACCAAGTCAG +
Preference number: 4 (lower is better)
Translates to: DALTLLREVGYKNVSVLFYCQSD*LFPPSQ
Trigger: CTGACTTGGTGGAAATAACCAATCTGATTGACAGTA...GAAAAGCACTGACACATTTTTGTAACCAACCTCACGTAGAAGTGTGAGAGCATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR CCA 90 bp CACATGGAAGTGTGGTGGCTGCAAAACGAAGTTCACAGAATTTCAGGCAAAAACTGTGGTATGAATAACTaGGCATTTAATAACCTTGAG +
Preference number: 4 (lower is better)
Translates to: HMEVWWLQNEVHRISGKNCGMNN*AFNNLE
Trigger: CTCAAGGTTATTAAATGCCCAGTTATTCATACCACA...GTTTTTGCCTGAAATTCTGTGAACTTCGTTTTGCAGCCACCACACTTCCATGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
3UTR CAA 72 bp GGTGTGTTTTATTCCCATTTACAATTAGCCTCATCTTaGGCCAGTTTATTTGATCGTGCTTACAGACTGCTC +
Preference number: 4 (lower is better)
Translates to: GVFYSHLQLASS*ASLFDRAYRLL
Trigger: GAGCAGTCTGTAAGCACGATCAAATAAACTGGCCAAAGATGAGGCTAATTGTAAATGGGAATAAAACACACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369207.3
CDS-3UTR TCA 90 bp TATATTTATTTCTGCTACTCCTCTGCTATAATCCCAACACTGGCTTACAAAAGAGTTAAACAGCCAAGATaGGACATCTTGCCAGTGATC +
Preference number: 4 (lower is better)
Translates to: YIYFCYSSAIIPTLAYKRVKQPR*DILPVI
Trigger: GATCACTGGCAAGATGTCTCATCTTGGCTGTTTAAC...TCTTTTGTAAGCCAGTGTTGGGATTATAGCAGAGGAGTAGCAGAAATAAATATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR TCA 90 bp GGAGAAGCAAATGGTAACCATTTTAACGAGACCCTAAATCATATAAAGTGGTTGTCAAGGGTAGGAAAGTaGGATGAAATTGGCTCTTAC +
Preference number: 4 (lower is better)
Translates to: GEANGNHFNETLNHIKWLSRVGK*DEIGSY
Trigger: GTAAGAGCCAATTTCATCTCACTTTCCTACCCTTGA...CAACCACTTTATATGATTTAGGGTCTCGTTAAAATGGTTACCATTTGCTTCTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341276.11
ENST00000622726.4
CDS-3UTR GCA 90 bp TTATTTCTGCTACTCCTCTGCTATAATCCCAACACTGGCTTACAAAAGAGCAATTATGGTGGGAGGCTTTaGAAGTTTAGAAAAGCAGTT +
Preference number: 4 (lower is better)
Translates to: LFLLLLCYNPNTGLQKSNYGGRL*KFRKAV
Trigger: AACTGCTTTTCTAAACTTGCAAAGCCTCCCACCATA...ATTGCTCTTTTGTAAGCCAGTGTTGGGATTATAGCAGAGGAGTAGCAGAAATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341276.11
ENST00000622726.4
CDS-3UTR GCA 90 bp TATATTTATTTCTGCTACTCCTCTGCTATAATCCCAACACTGGCTTACAAAAGAGCTGTTGACCTCTTTTaGTTCCATCGTGCCCTTTTT +
Preference number: 4 (lower is better)
Translates to: YIYFCYSSAIIPTLAYKRAVDLF*FHRALF
Trigger: AAAAAGGGCACGATGGAAGCAAAAGAGGTCAACAGC...TCTTTTGTAAGCCAGTGTTGGGATTATAGCAGAGGAGTAGCAGAAATAAATATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR GCA 90 bp CCTCATCTTTGGCCAGTTTATTTGATCGTGCTTACAGACTGCTCCATCACATATATGCTGATGTTTCCTTaGTCTAGAAGTTTAGAAATG +
Preference number: 4 (lower is better)
Translates to: PHLWPVYLIVLTDCSITYMLMFP*SRSLEM
Trigger: CATTTCTAAACTTCTAGAGCAAGGAAACATCAGCAT...ATATGTGATGGAGCAGTCTGTAAGCACGATCAAATAAACTGGCCAAAGATGAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369207.3
CDS-3UTR CCA 90 bp TCATCTTTGGCCAGTTTATTTGATCGTGCTTACAGACTGCTCCATCACATATGTTACTGTCAATCAGATTaGTTATTTCCACCAAGTCAG +
Preference number: 4 (lower is better)
Translates to: SSLASLFDRAYRLLHHICYCQSD*LFPPSQ
Trigger: CTGACTTGGTGGAAATAACCAATCTGATTGACAGTA...ACATATGTGATGGAGCAGTCTGTAAGCACGATCAAATAAACTGGCCAAAGATGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369207.3
CDS-3UTR CCA 90 bp GATGCTCTCACACTTCTACGTGAGGTTGGTTACAAAAATGTGTCAGTGCTTTTCTGTGGTATGAATAACTaGGCATTTAATAACCTTGAG +
Preference number: 4 (lower is better)
Translates to: DALTLLREVGYKNVSVLFCGMNN*AFNNLE
Trigger: CTCAAGGTTATTAAATGCCCAGTTATTCATACCACA...GAAAAGCACTGACACATTTTTGTAACCAACCTCACGTAGAAGTGTGAGAGCATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR CCA 90 bp ACAGGAGAGCTAATAGACAAACAAAATCCACATGGAAGTGTGGTGGCTGCAAAAGAGCAATTCAGGCAATaGATATGTCACATCATTTTT +
Preference number: 4 (lower is better)
Translates to: TGELIDKQNPHGSVVAAKEQFRQ*ICHIIF
Trigger: AAAAATGATGTGACATATCCATTGCCTGAATTGCTC...TTTTGCAGCCACCACACTTCCATGTGGATTTTGTTTGTCTATTAGCTCTCCTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR TCA 90 bp TATATTTATTTCTGCTACTCCTCTGCTATAATCCCAACACTGGCTTACAAAAGATCATGGACTTCAAAATaGGTCGAGATCACCACAGAA +
Preference number: 4 (lower is better)
Translates to: YIYFCYSSAIIPTLAYKRSWTSK*VEITTE
Trigger: TTCTGTGGTGATCTCGACTCATTTTGAAGTCCATGA...TCTTTTGTAAGCCAGTGTTGGGATTATAGCAGAGGAGTAGCAGAAATAAATATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341276.11
ENST00000622726.4
CDS-3UTR GCA 90 bp TATATTTATTTCTGCTACTCCTCTGCTATAATCCCAACACTGGCTTACAAAAGACAGTTGATAGCTAGATaGAGATTTGTTCCCAGTTCT +
Preference number: 4 (lower is better)
Translates to: YIYFCYSSAIIPTLAYKRQLIAR*RFVPSS
Trigger: AGAACTGGGAACAAATCTGCATCTAGCTATCAACTG...TCTTTTGTAAGCCAGTGTTGGGATTATAGCAGAGGAGTAGCAGAAATAAATATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR GCA 90 bp TATATTTATTTCTGCTACTCCTCTGCTATAATCCCAACACTGGCTTACAAAAGATTTGGAAGCAGTTCCTaGAATTATGTAACACCTGGA +
Preference number: 4 (lower is better)
Translates to: YIYFCYSSAIIPTLAYKRFGSSS*NYVTPG
Trigger: TCCAGGTGTTACATAATTGCAGGAACTGCTTCCAAA...TCTTTTGTAAGCCAGTGTTGGGATTATAGCAGAGGAGTAGCAGAAATAAATATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR CCA 90 bp TTATTTCTGCTACTCCTCTGCTATAATCCCAACACTGGCTTACAAAAGAGCAATGTTGTTAATTCAGGATaGGGTATACAAATCACTTCT +
Preference number: 4 (lower is better)
Translates to: LFLLLLCYNPNTGLQKSNVVNSG*GIQITS
Trigger: AGAAGTGATTTGTATACCCCATCCTGAATTAACAAC...ATTGCTCTTTTGTAAGCCAGTGTTGGGATTATAGCAGAGGAGTAGCAGAAATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341276.11
ENST00000622726.4
CDS-3UTR CCA 90 bp TATATTTATTTCTGCTACTCCTCTGCTATAATCCCAACACTGGCTTACAAAAGAAATAAACACAGAAGATaGACATCTGTTCCCAGCACA +
Preference number: 4 (lower is better)
Translates to: YIYFCYSSAIIPTLAYKRNKHRR*TSVPST
Trigger: TGTGCTGGGAACAGATGTCCATCTTCTGTGTTTATT...TCTTTTGTAAGCCAGTGTTGGGATTATAGCAGAGGAGTAGCAGAAATAAATATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR GCA 90 bp GGAGAAGCAAATGGTAACCATTTTAACGAGACCCTAAATCATATAAAGTGGTTGATGCTGATGTTTCCTTaGTCTAGAAGTTTAGAAATG +
Preference number: 4 (lower is better)
Translates to: GEANGNHFNETLNHIKWLMLMFP*SRSLEM
Trigger: CATTTCTAAACTTCTAGAGCAAGGAAACATCAGCAT...CAACCACTTTATATGATTTAGGGTCTCGTTAAAATGGTTACCATTTGCTTCTCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341276.11
ENST00000622726.4
CDS-3UTR GCA 90 bp TATATTTATTTCTGCTACTCCTCTGCTATAATCCCAACACTGGCTTACAAAAGAATGCTGATGTTTCCTTaGTCTAGAAGTTTAGAAATG +
Preference number: 4 (lower is better)
Translates to: YIYFCYSSAIIPTLAYKRMLMFP*SRSLEM
Trigger: CATTTCTAAACTTCTAGAGCAAGGAAACATCAGCAT...TCTTTTGTAAGCCAGTGTTGGGATTATAGCAGAGGAGTAGCAGAAATAAATATA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS TCA 90 bp CCTGGGGTGTGTACAGCCCTATCCAGAGGATGCTCCTGTTTCGGCTaGTTCCTCTACACCTTGTGTGGGGAAGGTGGGCACCAGCGGCTC +
Preference number: 5 (lower is better)
Translates to: PGVCTALSRGCSCFG*FLYTLCGEGGHQRL
Trigger: GAGCCGCTGGTGCCCACCTTCCCCACACAAGGTGTAGAGGAATCAGCCGAAACAGGAGCATCCTCTGGATAGGGCTGTACACACCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR CAA 90 bp AACTCCATGTGGAGACACGGCGCCGTACTTCAGACCTCCCGGTCTACTAATACTTCTGCCTCCTCCGCCTaGGCCAGCTCGGGCAGAGCA +
Preference number: 5 (lower is better)
Translates to: NSMWRHGAVLQTSRSTNTSASSA*ASSGRA
Trigger: TGCTCTGCCCGAGCTGGCCAAGGCGGAGGAGGCAGA...AGTATTAGTAGACCGGGAGGTCTGAAGTACGGCGCCGTGTCTCCACATGGAGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341276.11
ENST00000622726.4
CDS-3UTR CAA 90 bp GCCGTACTTCAGACCTCCCGGTCTACTAATACTGATGGTGTGGCTGGAACCTGGTGCGTGATGGTGCTGTaGACCCACTGCACGGCGGTG +
Preference number: 5 (lower is better)
Translates to: AVLQTSRSTNTDGVAGTWCVMVL*THCTAV
Trigger: CACCGCCGTGCAGTGGGTCAACAGCACCATCACGCA...CCAGGTTCCAGCCACACCATCAGTATTAGTAGACCGGGAGGTCTGAAGTACGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341276.11
ENST00000622726.4
CDS CCA 90 bp ACGGCGCCGTACTTCAGACCTCCCGGTCTACTAATACTGATGGTGTaGCTGGAACCTGGGGTGTGTACAGCCCTATCCAGAGGATGCTCC +
Preference number: 5 (lower is better)
Translates to: TAPYFRPPGLLILMV*LEPGVCTALSRGCS
Trigger: GGAGCATCCTCTGGATAGGGCTGTACACACCCCAGGTTCCAGCCACACCATCAGTATTAGTAGACCGGGAGGTCTGAAGTACGGCGCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS CCA 90 bp CTTCAGACCTCCCGGTCTACTAATACTGATGGTGTGGCTGGAACCTaGGGTGTGTACAGCCCTATCCAGAGGATGCTCCTGTTTCGGCTG +
Preference number: 5 (lower is better)
Translates to: LQTSRSTNTDGVAGT*GVYSPIQRMLLFRL
Trigger: CAGCCGAAACAGGAGCATCCTCTGGATAGGGCTGTACACACCCCAGGTTCCAGCCACACCATCAGTATTAGTAGACCGGGAGGTCTGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR CAA 90 bp GCCGTACTTCAGACCTCCCGGTCTACTAATACTGATGGTGTGGCTGGAACCTGGTGTCCACTTGCAGGGTaGGAAGCCCCAGTCCATCTA +
Preference number: 5 (lower is better)
Translates to: AVLQTSRSTNTDGVAGTWCPLAG*EAPVHL
Trigger: TAGATGGACTGGGGCTTCCAACCCTGCAAGTGGACA...CCAGGTTCCAGCCACACCATCAGTATTAGTAGACCGGGAGGTCTGAAGTACGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341276.11
ENST00000622726.4
CDS GCA 90 bp GGCCCCTATGGCCATACTGCCACTGAGTACAGGCTCAACAGGCTCTaGAGGCGCAATAGGTTTCTCTGTAATAGTATCCTTCCTCCCTGG +
Preference number: 5 (lower is better)
Translates to: GPYGHTATEYRLNRL*RRNRFLCNSILPPW
Trigger: CCAGGGAGGAAGGATACTATTACAGAGAAACCTATTGCGCCTGCAGAGCCTGTTGAGCCTGTACTCAGTGGCAGTATGGCCATAGGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000369207.3
ENST00000622726.4
CDS-3UTR CAA 90 bp GAGTGTGGAGTTGGCAACAAAAATATTGGCCTCTTTTACTGGAGCGTGTCCCTGTGCGTGATGGTGCTGTaGACCCACTGCACGGCGGTG +
Preference number: 5 (lower is better)
Translates to: ECGVGNKNIGLFYWSVSLCVMVL*THCTAV
Trigger: CACCGCCGTGCAGTGGGTCAACAGCACCATCACGCA...CAGGGACACGCTCCAGTAAAAGAGGCCAATATTTTTGTTGCCAACTCCACACTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341276.11
ENST00000622726.4
CDS-3UTR CAA 90 bp GACACGGCGCCGTACTTCAGACCTCCCGGTCTACTAATACTGATGGTGTGGCTGCGACACCTTGTTTGGTaGTTAATTCAGGATGGGGTA +
Preference number: 5 (lower is better)
Translates to: DTAPYFRPPGLLILMVWLRHLVW*LIQDGV
Trigger: TACCCCATCCTGAATTAACAACCAAACAAGGTGTCG...CAGCCACACCATCAGTATTAGTAGACCGGGAGGTCTGAAGTACGGCGCCGTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341276.11
ENST00000622726.4
CDS-3UTR CAA 90 bp AACTCCATGTGGAGACACGGCGCCGTACTTCAGACCTCCCGGTCTACTAATACTGCCAGTGATCTGCTGTaGACCTCTTTTGCTTCCATC +
Preference number: 5 (lower is better)
Translates to: NSMWRHGAVLQTSRSTNTASDLL*TSFASI
Trigger: GATGGAAGCAAAAGAGGTCAACAGCAGATCACTGGC...AGTATTAGTAGACCGGGAGGTCTGAAGTACGGCGCCGTGTCTCCACATGGAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR CAA 90 bp ACCTCCCGGTCTACTAATACTGATGGTGTGGCTGGAACCTGGGGTGTGTACAGCATCAGCCCATTGGATTaGGGGATGCTGATGTTTCCT +
Preference number: 5 (lower is better)
Translates to: TSRSTNTDGVAGTWGVYSISPLD*GMLMFP
Trigger: AGGAAACATCAGCATCCCCAAATCCAATGGGCTGAT...GCTGTACACACCCCAGGTTCCAGCCACACCATCAGTATTAGTAGACCGGGAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR CAA 90 bp GCCGTACTTCAGACCTCCCGGTCTACTAATACTGATGGTGTGGCTGGAACCTGGATCAGCCCATTGGATTaGGGGATGCTGATGTTTCCT +
Preference number: 5 (lower is better)
Translates to: AVLQTSRSTNTDGVAGTWISPLD*GMLMFP
Trigger: AGGAAACATCAGCATCCCCAAATCCAATGGGCTGAT...CCAGGTTCCAGCCACACCATCAGTATTAGTAGACCGGGAGGTCTGAAGTACGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR CAA 90 bp GCCGTACTTCAGACCTCCCGGTCTACTAATACTGATGGTGTGGCTGGAACCTGGCGACACCTTGTTTGGTaGTTAATTCAGGATGGGGTA +
Preference number: 5 (lower is better)
Translates to: AVLQTSRSTNTDGVAGTWRHLVW*LIQDGV
Trigger: TACCCCATCCTGAATTAACAACCAAACAAGGTGTCG...CCAGGTTCCAGCCACACCATCAGTATTAGTAGACCGGGAGGTCTGAAGTACGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341276.11
ENST00000622726.4
CDS-3UTR CAA 90 bp AACTCCATGTGGAGACACGGCGCCGTACTTCAGACCTCCCGGTCTACTAATACTAGTTCTAGCCCCAGGTaGGCACAGATTTCCTGTATT +
Preference number: 5 (lower is better)
Translates to: NSMWRHGAVLQTSRSTNTSSSPR*AQISCI
Trigger: AATACAGGAAATCTGTGCCAACCTGGGGCTAGAACT...AGTATTAGTAGACCGGGAGGTCTGAAGTACGGCGCCGTGTCTCCACATGGAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR CAA 90 bp AACTCCATGTGGAGACACGGCGCCGTACTTCAGACCTCCCGGTCTACTAATACTTCTTTCCCCACTATTTaGCATATGGTGGGAGGCTTT +
Preference number: 5 (lower is better)
Translates to: NSMWRHGAVLQTSRSTNTSFPTI*HMVGGF
Trigger: AAAGCCTCCCACCATATGCAAAATAGTGGGGAAAGA...AGTATTAGTAGACCGGGAGGTCTGAAGTACGGCGCCGTGTCTCCACATGGAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341276.11
ENST00000622726.4
CDS-3UTR CAA 90 bp CATCTGTTCCCAGCACAGAGAGCTTCTAGGGTCATTAGGTTTTTGTTCTCAGAGTGTCCACTTGCAGGGTaGGAAGCCCCAGTCCATCTA +
Preference number: 5 (lower is better)
Translates to: HLFPAQRASRVIRFLFSECPLAG*EAPVHL
Trigger: TAGATGGACTGGGGCTTCCAACCCTGCAAGTGGACA...CTCTGAGAACAAAAACCTAATGACCCTAGAAGCTCTCTGTGCTGGGAACAGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341276.11
ENST00000622726.4
CDS-3UTR CAA 90 bp GACACGGCGCCGTACTTCAGACCTCCCGGTCTACTAATACTGATGGTGTGGCTGTCTCCCCTTATCTTCTaGTACTTTACTTGCGAAGAA +
Preference number: 5 (lower is better)
Translates to: DTAPYFRPPGLLILMVWLSPLIF*YFTCEE
Trigger: TTCTTCGCAAGTAAAGTACAAGAAGATAAGGGGAGA...CAGCCACACCATCAGTATTAGTAGACCGGGAGGTCTGAAGTACGGCGCCGTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341276.11
ENST00000622726.4
CDS-3UTR CAA 90 bp GCCGTACTTCAGACCTCCCGGTCTACTAATACTGATGGTGTGGCTGGAACCTGGATCTCGACACCTTGTTaGGTTGTTAATTCAGGATGG +
Preference number: 5 (lower is better)
Translates to: AVLQTSRSTNTDGVAGTWISTPC*VVNSGW
Trigger: CCATCCTGAATTAACAACCAAACAAGGTGTCGAGAT...CCAGGTTCCAGCCACACCATCAGTATTAGTAGACCGGGAGGTCTGAAGTACGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341276.11
ENST00000622726.4
CDS-3UTR CAA 90 bp ACCTCCCGGTCTACTAATACTGATGGTGTGGCTGGAACCTGGGGTGTGTACAGCATCTCGACACCTTGTTaGGTTGTTAATTCAGGATGG +
Preference number: 5 (lower is better)
Translates to: TSRSTNTDGVAGTWGVYSISTPC*VVNSGW
Trigger: CCATCCTGAATTAACAACCAAACAAGGTGTCGAGAT...GCTGTACACACCCCAGGTTCCAGCCACACCATCAGTATTAGTAGACCGGGAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341276.11
ENST00000622726.4
CDS-3UTR CAA 90 bp GCCGTACTTCAGACCTCCCGGTCTACTAATACTGATGGTGTGGCTGGAACCTGGTCATGTCCAGCACAGTaGATAGCTAGATGCAGATTT +
Preference number: 5 (lower is better)
Translates to: AVLQTSRSTNTDGVAGTWSCPAQ*IARCRF
Trigger: AAATCTGCATCTAGCTATCAACTGTGCTGGACATGA...CCAGGTTCCAGCCACACCATCAGTATTAGTAGACCGGGAGGTCTGAAGTACGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR CAA 90 bp AACTCCATGTGGAGACACGGCGCCGTACTTCAGACCTCCCGGTCTACTAATACTTTTATGATCAGCCCATaGGATTTGGGGATGCTGATG +
Preference number: 5 (lower is better)
Translates to: NSMWRHGAVLQTSRSTNTFMISP*DLGMLM
Trigger: CATCAGCATCCCCAAATCCAATGGGCTGATCATAAA...AGTATTAGTAGACCGGGAGGTCTGAAGTACGGCGCCGTGTCTCCACATGGAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR CAA 90 bp ACCTCCCGGTCTACTAATACTGATGGTGTGGCTGGAACCTGGGGTGTGTACAGCTTGGCAACAAAAATATaGGCCTCTTTTACTGGAGCG +
Preference number: 5 (lower is better)
Translates to: TSRSTNTDGVAGTWGVYSLATKI*ASFTGA
Trigger: CGCTCCAGTAAAAGAGGCCAATATTTTTGTTGCCAA...GCTGTACACACCCCAGGTTCCAGCCACACCATCAGTATTAGTAGACCGGGAGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR CAA 90 bp ACCTCCCGGTCTACTAATACTGATGGTGTGGCTGGAACCTGGGGTGTGTACAGCCACTTCTACGTGAGGTaGGTTACAAAAATGTGTCAG +
Preference number: 5 (lower is better)
Translates to: TSRSTNTDGVAGTWGVYSHFYVR*VTKMCQ
Trigger: CTGACACATTTTTGTAACCAACCTCACGTAGAAGTG...GCTGTACACACCCCAGGTTCCAGCCACACCATCAGTATTAGTAGACCGGGAGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS GCA 90 bp CAGTTCCTGCAATTATGTAACACCTGGAACCAAGTGCGTGATAGATaGTGTCCCACTGTTCAGAGTCGTAGTCCATCAGCTCATGTCCAG +
Preference number: 5 (lower is better)
Translates to: QFLQLCNTWNQVRDR*CPTVQSRSPSAHVQ
Trigger: CTGGACATGAGCTGATGGACTACGACTCTGAACAGTGGGACAGCATCTATCACGCACTTGGTTCCAGGTGTTACATAATTGCAGGAACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409522.5
CDS-3UTR CAA 90 bp ACCTCCCGGTCTACTAATACTGATGGTGTGGCTGGAACCTGGGGTGTGTACAGCGTTCTTGGGAAAGTTTaGAATGGTGCAGAATATGTC +
Preference number: 5 (lower is better)
Translates to: TSRSTNTDGVAGTWGVYSVLGKV*NGAEYV
Trigger: GACATATTCTGCACCATTCAAAACTTTCCCAAGAAC...GCTGTACACACCCCAGGTTCCAGCCACACCATCAGTATTAGTAGACCGGGAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341276.11
ENST00000622726.4
CDS-3UTR CAA 90 bp TATATTTATTTCTGCTACTCCTCTGCTATAATCCCAACACTGGCTTACAAAAGATCTGCCTCCTCCGCCTaGGCCAGCTCGGGCAGAGCA +
Preference number: 5 (lower is better)
Translates to: YIYFCYSSAIIPTLAYKRSASSA*ASSGRA
Trigger: TGCTCTGCCCGAGCTGGCCAAGGCGGAGGAGGCAGA...TCTTTTGTAAGCCAGTGTTGGGATTATAGCAGAGGAGTAGCAGAAATAAATATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341276.11
ENST00000622726.4
CDS-3UTR CAA 90 bp AAATCCACATGGAAGTGTGGTGGCTGCAAAACGAAGTTCACAGAATTTCAGGCAAGCATGGCACAGGCTTaGGCAACAGCTAGTGACACG +
Preference number: 5 (lower is better)
Translates to: KSTWKCGGCKTKFTEFQASMAQA*ATASDT
Trigger: CGTGTCACTAGCTGTTGCCAAAGCCTGTGCCATGCT...TGCCTGAAATTCTGTGAACTTCGTTTTGCAGCCACCACACTTCCATGTGGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341276.11
ENST00000622726.4
CDS-3UTR CAA 90 bp AACTCCATGTGGAGACACGGCGCCGTACTTCAGACCTCCCGGTCTACTAATACTATTGAAGGGTACTTGTaGATCAGATCCACATACAGG +
Preference number: 5 (lower is better)
Translates to: NSMWRHGAVLQTSRSTNTIEGYL*IRSTYR
Trigger: CCTGTATGTGGATCTGATCAACAAGTACCCTTCAAT...AGTATTAGTAGACCGGGAGGTCTGAAGTACGGCGCCGTGTCTCCACATGGAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341276.11
ENST00000622726.4
CDS-3UTR CAA 90 bp GACACGGCGCCGTACTTCAGACCTCCCGGTCTACTAATACTGATGGTGTGGCTGTTTATCACTTGCGGATaGCTTTTTAAATGCTGTGGT +
Preference number: 5 (lower is better)
Translates to: DTAPYFRPPGLLILMVWLFITCG*LFKCCG
Trigger: ACCACAGCATTTAAAAAGCAATCCGCAAGTGATAAA...CAGCCACACCATCAGTATTAGTAGACCGGGAGGTCTGAAGTACGGCGCCGTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR CAA 90 bp CAATTAGCCTCATCTTTGGCCAGTTTATTTGATCGTGCTTACAGACTGCTCCATAGCATGGCACAGGCTTaGGCAACAGCTAGTGACACG +
Preference number: 5 (lower is better)
Translates to: QLASSLASLFDRAYRLLHSMAQA*ATASDT
Trigger: CGTGTCACTAGCTGTTGCCAAAGCCTGTGCCATGCT...ATGGAGCAGTCTGTAAGCACGATCAAATAAACTGGCCAAAGATGAGGCTAATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369207.3
CDS-3UTR CAA 90 bp GCCGTACTTCAGACCTCCCGGTCTACTAATACTGATGGTGTGGCTGGAACCTGGTTACTGTCAATCAGATaGGTTATTTCCACCAAGTCA +
Preference number: 5 (lower is better)
Translates to: AVLQTSRSTNTDGVAGTWLLSIR*VISTKS
Trigger: TGACTTGGTGGAAATAACCAATCTGATTGACAGTAA...CCAGGTTCCAGCCACACCATCAGTATTAGTAGACCGGGAGGTCTGAAGTACGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR CAA 90 bp TTAGCCTCATCTTTGGCCAGTTTATTTGATCGTGCTTACAGACTGCTCCATCACTCCTGGCATCACAGCTaGAAGATGAAGTGGCCAGTG +
Preference number: 5 (lower is better)
Translates to: LASSLASLFDRAYRLLHHSWHHS*KMKWPV
Trigger: CACTGGCCACTTCATCTTCAAGCTGTGATGCCAGGA...GTGATGGAGCAGTCTGTAAGCACGATCAAATAAACTGGCCAAAGATGAGGCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369207.3
CDS CCA 90 bp ACACTTTCACCAAAGTCATTGTTTCCTGTTCTTGCCCTCCAATCCTaGCATCACAGCTTGAAGATGAAGTGGCCAGTGTTCCATTCTGGA +
Preference number: 5 (lower is better)
Translates to: TLSPKSLFPVLALQS*HHSLKMKWPVFHSG
Trigger: TCCAGAATGGAACACTGGCCACTTCATCTTCAAGCTGTGATGCCAGGATTGGAGGGCAAGAACAGGAAACAATGACTTTGGTGAAAGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369207.3
CDS-3UTR CAA 90 bp TTATTTCTGCTACTCCTCTGCTATAATCCCAACACTGGCTTACAAAAGAGCAATGCAGAATATGTCCACTaGCAGGGTTGGAAGCCCCAG +
Preference number: 5 (lower is better)
Translates to: LFLLLLCYNPNTGLQKSNAEYVH*QGWKPQ
Trigger: CTGGGGCTTCCAACCCTGCAAGTGGACATATTCTGC...ATTGCTCTTTTGTAAGCCAGTGTTGGGATTATAGCAGAGGAGTAGCAGAAATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341276.11
ENST00000622726.4
CDS-3UTR CAA 90 bp TTATTTCTGCTACTCCTCTGCTATAATCCCAACACTGGCTTACAAAAGAGCAATAGCATGGCACAGGCTTaGGCAACAGCTAGTGACACG +
Preference number: 5 (lower is better)
Translates to: LFLLLLCYNPNTGLQKSNSMAQA*ATASDT
Trigger: CGTGTCACTAGCTGTTGCCAAAGCCTGTGCCATGCT...ATTGCTCTTTTGTAAGCCAGTGTTGGGATTATAGCAGAGGAGTAGCAGAAATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341276.11
ENST00000622726.4
CDS-3UTR CAA 90 bp GATGCTCTCACACTTCTACGTGAGGTTGGTTACAAAAATGTGTCAGTGCTTTTCGCCAGTGATCTGCTGTaGACCTCTTTTGCTTCCATC +
Preference number: 5 (lower is better)
Translates to: DALTLLREVGYKNVSVLFASDLL*TSFASI
Trigger: GATGGAAGCAAAAGAGGTCAACAGCAGATCACTGGC...GAAAAGCACTGACACATTTTTGTAACCAACCTCACGTAGAAGTGTGAGAGCATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR CAA 90 bp CACATGGAAGTGTGGTGGCTGCAAAACGAAGTTCACAGAATTTCAGGCAAAAACAGTTCTAGCCCCAGGTaGGCACAGATTTCCTGTATT +
Preference number: 5 (lower is better)
Translates to: HMEVWWLQNEVHRISGKNSSSPR*AQISCI
Trigger: AATACAGGAAATCTGTGCCAACCTGGGGCTAGAACT...GTTTTTGCCTGAAATTCTGTGAACTTCGTTTTGCAGCCACCACACTTCCATGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR CAA 90 bp CCTGAAAAATGGACAGGAGAGCTAATAGACAAACAAAATCCACATGGAAGTGTGTTTTTGTCTCTGCTTTaGGAGGAGAGGGAGGCGCCA +
Preference number: 5 (lower is better)
Translates to: PEKWTGELIDKQNPHGSVFLSLL*EEREAP
Trigger: TGGCGCCTCCCTCTCCTCCAAAAGCAGAGACAAAAA...CACACTTCCATGTGGATTTTGTTTGTCTATTAGCTCTCCTGTCCATTTTTCAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000622726.4
CDS-3UTR CAA 90 bp TTAGCCTCATCTTTGGCCAGTTTATTTGATCGTGCTTACAGACTGCTCCATCACCGACACCTTGTTTGGTaGTTAATTCAGGATGGGGTA +
Preference number: 5 (lower is better)
Translates to: LASSLASLFDRAYRLLHHRHLVW*LIQDGV
Trigger: TACCCCATCCTGAATTAACAACCAAACAAGGTGTCG...GTGATGGAGCAGTCTGTAAGCACGATCAAATAAACTGGCCAAAGATGAGGCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369207.3
CDS-3UTR CAA 90 bp CATCTTTGGCCAGTTTATTTGATCGTGCTTACAGACTGCTCCATCACATATGTTGCCAGTGATCTGCTGTaGACCTCTTTTGCTTCCATC +
Preference number: 5 (lower is better)
Translates to: HLWPVYLIVLTDCSITYVASDLL*TSFASI
Trigger: GATGGAAGCAAAAGAGGTCAACAGCAGATCACTGGC...AACATATGTGATGGAGCAGTCTGTAAGCACGATCAAATAAACTGGCCAAAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369207.3
CDS-3UTR CAA 90 bp TTAGCCTCATCTTTGGCCAGTTTATTTGATCGTGCTTACAGACTGCTCCATCACATCTCCGCTGCATTTTaGTATGTGCCCATGATCACT +
Preference number: 5 (lower is better)
Translates to: LASSLASLFDRAYRLLHHISAAF*YVPMIT
Trigger: AGTGATCATGGGCACATACAAAAATGCAGCGGAGAT...GTGATGGAGCAGTCTGTAAGCACGATCAAATAAACTGGCCAAAGATGAGGCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369207.3
CDS-3UTR CAA 90 bp AGGATGGGGTGTTTGACTGAGTGTGGAGTTGGCAACAAAAATATTGGCCTCTTTATCTCCGCTGCATTTTaGTATGTGCCCATGATCACT +
Preference number: 5 (lower is better)
Translates to: RMGCLTECGVGNKNIGLFISAAF*YVPMIT
Trigger: AGTGATCATGGGCACATACAAAAATGCAGCGGAGAT...AAAGAGGCCAATATTTTTGTTGCCAACTCCACACTCAGTCAAACACCCCATCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341276.11
ENST00000622726.4
CDS-3UTR CAA 90 bp GATGCTCTCACACTTCTACGTGAGGTTGGTTACAAAAATGTGTCAGTGCTTTTCATCAGCCCATTGGATTaGGGGATGCTGATGTTTCCT +
Preference number: 5 (lower is better)
Translates to: DALTLLREVGYKNVSVLFISPLD*GMLMFP
Trigger: AGGAAACATCAGCATCCCCAAATCCAATGGGCTGAT...GAAAAGCACTGACACATTTTTGTAACCAACCTCACGTAGAAGTGTGAGAGCATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS TCA 90 bp CCACATACAGGTCAACCATCTCCGCTGCATTTTTGTATGTGCCCATaGTCACTTCATACTTTCCTTTATTGTAGTCCATCAGCTCATGTC +
Preference number: 5 (lower is better)
Translates to: PHTGQPSPLHFCMCP*SLHTFLYCSPSAHV
Trigger: GACATGAGCTGATGGACTACAATAAAGGAAAGTATGAAGTGATCATGGGCACATACAAAAATGCAGCGGAGATGGTTGACCTGTATGTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000369207.3
ENST00000622726.4
CDS-3UTR CAA 90 bp CATCTTTGGCCAGTTTATTTGATCGTGCTTACAGACTGCTCCATCACATATGTTAGTTCTAGCCCCAGGTaGGCACAGATTTCCTGTATT +
Preference number: 5 (lower is better)
Translates to: HLWPVYLIVLTDCSITYVSSSPR*AQISCI
Trigger: AATACAGGAAATCTGTGCCAACCTGGGGCTAGAACT...AACATATGTGATGGAGCAGTCTGTAAGCACGATCAAATAAACTGGCCAAAGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369207.3
CDS-3UTR CAA 90 bp TCATCTTTGGCCAGTTTATTTGATCGTGCTTACAGACTGCTCCATCACATATGTATCAGCCCATTGGATTaGGGGATGCTGATGTTTCCT +
Preference number: 5 (lower is better)
Translates to: SSLASLFDRAYRLLHHICISPLD*GMLMFP
Trigger: AGGAAACATCAGCATCCCCAAATCCAATGGGCTGAT...ACATATGTGATGGAGCAGTCTGTAAGCACGATCAAATAAACTGGCCAAAGATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369207.3
CDS-3UTR CAA 90 bp CAATTAGCCTCATCTTTGGCCAGTTTATTTGATCGTGCTTACAGACTGCTCCATTTTATGATCAGCCCATaGGATTTGGGGATGCTGATG +
Preference number: 5 (lower is better)
Translates to: QLASSLASLFDRAYRLLHFMISP*DLGMLM
Trigger: CATCAGCATCCCCAAATCCAATGGGCTGATCATAAA...ATGGAGCAGTCTGTAAGCACGATCAAATAAACTGGCCAAAGATGAGGCTAATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369207.3
CDS-3UTR CAA 90 bp AAATCCACATGGAAGTGTGGTGGCTGCAAAACGAAGTTCACAGAATTTCAGGCATTGGCAACAAAAATATaGGCCTCTTTTACTGGAGCG +
Preference number: 5 (lower is better)
Translates to: KSTWKCGGCKTKFTEFQALATKI*ASFTGA
Trigger: CGCTCCAGTAAAAGAGGCCAATATTTTTGTTGCCAA...TGCCTGAAATTCTGTGAACTTCGTTTTGCAGCCACCACACTTCCATGTGGATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR CAA 90 bp AGGATGGGGTGTTTGACTGAGTGTGGAGTTGGCAACAAAAATATTGGCCTCTTTCACTTCTACGTGAGGTaGGTTACAAAAATGTGTCAG +
Preference number: 5 (lower is better)
Translates to: RMGCLTECGVGNKNIGLFHFYVR*VTKMCQ
Trigger: CTGACACATTTTTGTAACCAACCTCACGTAGAAGTG...AAAGAGGCCAATATTTTTGTTGCCAACTCCACACTCAGTCAAACACCCCATCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR CAA 90 bp CACATGGAAGTGTGGTGGCTGCAAAACGAAGTTCACAGAATTTCAGGCAAAAACGTTCTTGGGAAAGTTTaGAATGGTGCAGAATATGTC +
Preference number: 5 (lower is better)
Translates to: HMEVWWLQNEVHRISGKNVLGKV*NGAEYV
Trigger: GACATATTCTGCACCATTCAAAACTTTCCCAAGAAC...GTTTTTGCCTGAAATTCTGTGAACTTCGTTTTGCAGCCACCACACTTCCATGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341276.11
ENST00000622726.4
CDS-3UTR CAA 90 bp AGGATGGGGTGTTTGACTGAGTGTGGAGTTGGCAACAAAAATATTGGCCTCTTTTCTCCCCTTATCTTCTaGTACTTTACTTGCGAAGAA +
Preference number: 5 (lower is better)
Translates to: RMGCLTECGVGNKNIGLFSPLIF*YFTCEE
Trigger: TTCTTCGCAAGTAAAGTACAAGAAGATAAGGGGAGA...AAAGAGGCCAATATTTTTGTTGCCAACTCCACACTCAGTCAAACACCCCATCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000341276.11
ENST00000622726.4
CDS-3UTR CAA 90 bp CAATTAGCCTCATCTTTGGCCAGTTTATTTGATCGTGCTTACAGACTGCTCCATATCTCGACACCTTGTTaGGTTGTTAATTCAGGATGG +
Preference number: 5 (lower is better)
Translates to: QLASSLASLFDRAYRLLHISTPC*VVNSGW
Trigger: CCATCCTGAATTAACAACCAAACAAGGTGTCGAGAT...ATGGAGCAGTCTGTAAGCACGATCAAATAAACTGGCCAAAGATGAGGCTAATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369207.3
CDS-3UTR CAA 90 bp CAATTAGCCTCATCTTTGGCCAGTTTATTTGATCGTGCTTACAGACTGCTCCATTCATGTCCAGCACAGTaGATAGCTAGATGCAGATTT +
Preference number: 5 (lower is better)
Translates to: QLASSLASLFDRAYRLLHSCPAQ*IARCRF
Trigger: AAATCTGCATCTAGCTATCAACTGTGCTGGACATGA...ATGGAGCAGTCTGTAAGCACGATCAAATAAACTGGCCAAAGATGAGGCTAATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369207.3
CDS-3UTR CAA 90 bp CCTGAAAAATGGACAGGAGAGCTAATAGACAAACAAAATCCACATGGAAGTGTGATCTCCGCTGCATTTTaGTATGTGCCCATGATCACT +
Preference number: 5 (lower is better)
Translates to: PEKWTGELIDKQNPHGSVISAAF*YVPMIT
Trigger: AGTGATCATGGGCACATACAAAAATGCAGCGGAGAT...CACACTTCCATGTGGATTTTGTTTGTCTATTAGCTCTCCTGTCCATTTTTCAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000341276.11
ENST00000622726.4
CDS-3UTR CAA 90 bp CCTGAAAAATGGACAGGAGAGCTAATAGACAAACAAAATCCACATGGAAGTGTGTTTATGATCAGCCCATaGGATTTGGGGATGCTGATG +
Preference number: 5 (lower is better)
Translates to: PEKWTGELIDKQNPHGSVFMISP*DLGMLM
Trigger: CATCAGCATCCCCAAATCCAATGGGCTGATCATAAA...CACACTTCCATGTGGATTTTGTTTGTCTATTAGCTCTCCTGTCCATTTTTCAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR CAA 90 bp TCATCTTTGGCCAGTTTATTTGATCGTGCTTACAGACTGCTCCATCACATATGTCTTTCACCAAAGTCATaGTTTCCTGTTCTTGCCCTC +
Preference number: 5 (lower is better)
Translates to: SSLASLFDRAYRLLHHICLSPKS*FPVLAL
Trigger: GAGGGCAAGAACAGGAAACAATGACTTTGGTGAAAG...ACATATGTGATGGAGCAGTCTGTAAGCACGATCAAATAAACTGGCCAAAGATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369207.3
CDS-3UTR CAA 90 bp CATCTTTGGCCAGTTTATTTGATCGTGCTTACAGACTGCTCCATCACATATGTTCTTTGGCCAGTTTATTaGATCGTGCTTACAGACTGC +
Preference number: 5 (lower is better)
Translates to: HLWPVYLIVLTDCSITYVLWPVY*IVLTDC
Trigger: GCAGTCTGTAAGCACGATCAAATAAACTGGCCAAAG...AACATATGTGATGGAGCAGTCTGTAAGCACGATCAAATAAACTGGCCAAAGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369207.3
CDS-3UTR CAA 90 bp TATATTTATTTCTGCTACTCCTCTGCTATAATCCCAACACTGGCTTACAAAAGATTTTTGTCTCTGCTTTaGGAGGAGAGGGCAGGTGCC +
Preference number: 5 (lower is better)
Translates to: YIYFCYSSAIIPTLAYKRFLSLL*EERAGA
Trigger: GGCACCTGCCCTCTCCTCCAAAAGCAGAGACAAAAA...TCTTTTGTAAGCCAGTGTTGGGATTATAGCAGAGGAGTAGCAGAAATAAATATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409522.5
CDS GCA 90 bp AGGGTACTTGTTGATCAGATCCACATACAGGTCAACCATCTCCGCTaGATTTTTGTATGTGCCCATGATCACTTCATACTTTCCTTTATT +
Preference number: 5 (lower is better)
Translates to: RVLVDQIHIQVNHLR*IFVCAHDHFILSFI
Trigger: AATAAAGGAAAGTATGAAGTGATCATGGGCACATACAAAAATGCAGCGGAGATGGTTGACCTGTATGTGGATCTGATCAACAAGTACCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000369207.3
ENST00000622726.4
CDS-3UTR CAA 90 bp TATATTTATTTCTGCTACTCCTCTGCTATAATCCCAACACTGGCTTACAAAAGAGCCAGTGATCTGCTGTaGACCTCTTTTGCTTCCATC +
Preference number: 5 (lower is better)
Translates to: YIYFCYSSAIIPTLAYKRASDLL*TSFASI
Trigger: GATGGAAGCAAAAGAGGTCAACAGCAGATCACTGGC...TCTTTTGTAAGCCAGTGTTGGGATTATAGCAGAGGAGTAGCAGAAATAAATATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR CAA 90 bp CCTGAAAAATGGACAGGAGAGCTAATAGACAAACAAAATCCACATGGAAGTGTGATTGAAGGGTACTTGTaGATCAGATCCACATACAGG +
Preference number: 5 (lower is better)
Translates to: PEKWTGELIDKQNPHGSVIEGYL*IRSTYR
Trigger: CCTGTATGTGGATCTGATCAACAAGTACCCTTCAAT...CACACTTCCATGTGGATTTTGTTTGTCTATTAGCTCTCCTGTCCATTTTTCAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341276.11
ENST00000622726.4
CDS-3UTR CAA 90 bp TCATCTTTGGCCAGTTTATTTGATCGTGCTTACAGACTGCTCCATCACATATGTATTGAAGGGTACTTGTaGATCAGATCCACATACAGG +
Preference number: 5 (lower is better)
Translates to: SSLASLFDRAYRLLHHICIEGYL*IRSTYR
Trigger: CCTGTATGTGGATCTGATCAACAAGTACCCTTCAAT...ACATATGTGATGGAGCAGTCTGTAAGCACGATCAAATAAACTGGCCAAAGATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369207.3
CDS-3UTR CAA 90 bp AGGATGGGGTGTTTGACTGAGTGTGGAGTTGGCAACAAAAATATTGGCCTCTTTATAATTGAAGGGTACTaGTTGATCAGATCCACATAC +
Preference number: 5 (lower is better)
Translates to: RMGCLTECGVGNKNIGLFIIEGY*LIRSTY
Trigger: GTATGTGGATCTGATCAACAAGTACCCTTCAATTAT...AAAGAGGCCAATATTTTTGTTGCCAACTCCACACTCAGTCAAACACCCCATCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341276.11
ENST00000622726.4
CDS-3UTR CAA 90 bp AAATCCACATGGAAGTGTGGTGGCTGCAAAACGAAGTTCACAGAATTTCAGGCAAGTTTAGAAATGCTTTaGGAAGCAGTTCCTGCAATT +
Preference number: 5 (lower is better)
Translates to: KSTWKCGGCKTKFTEFQASLEML*EAVPAI
Trigger: AATTGCAGGAACTGCTTCCAAAAGCATTTCTAAACT...TGCCTGAAATTCTGTGAACTTCGTTTTGCAGCCACCACACTTCCATGTGGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR CAA 90 bp TTATTTCTGCTACTCCTCTGCTATAATCCCAACACTGGCTTACAAAAGAGCAATTTTATGATCAGCCCATaGGATTTGGGGATGCTGATG +
Preference number: 5 (lower is better)
Translates to: LFLLLLCYNPNTGLQKSNFMISP*DLGMLM
Trigger: CATCAGCATCCCCAAATCCAATGGGCTGATCATAAA...ATTGCTCTTTTGTAAGCCAGTGTTGGGATTATAGCAGAGGAGTAGCAGAAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR CAA 90 bp AGGATGGGGTGTTTGACTGAGTGTGGAGTTGGCAACAAAAATATTGGCCTCTTTTTACTGTCAATCAGATaGGTTATTTCCACCAAGTCA +
Preference number: 5 (lower is better)
Translates to: RMGCLTECGVGNKNIGLFLLSIR*VISTKS
Trigger: TGACTTGGTGGAAATAACCAATCTGATTGACAGTAA...AAAGAGGCCAATATTTTTGTTGCCAACTCCACACTCAGTCAAACACCCCATCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR CAA 90 bp CCTGAAAAATGGACAGGAGAGCTAATAGACAAACAAAATCCACATGGAAGTGTGTTGGCAACAAAAATATaGGCCTCTTTTACTGGAGCG +
Preference number: 5 (lower is better)
Translates to: PEKWTGELIDKQNPHGSVLATKI*ASFTGA
Trigger: CGCTCCAGTAAAAGAGGCCAATATTTTTGTTGCCAA...CACACTTCCATGTGGATTTTGTTTGTCTATTAGCTCTCCTGTCCATTTTTCAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR CAA 90 bp CAATTAGCCTCATCTTTGGCCAGTTTATTTGATCGTGCTTACAGACTGCTCCATCAATTAGCCTCATCTTaGGCCAGTTTATTTGATCGT +
Preference number: 5 (lower is better)
Translates to: QLASSLASLFDRAYRLLHQLASS*ASLFDR
Trigger: ACGATCAAATAAACTGGCCAAAGATGAGGCTAATTG...ATGGAGCAGTCTGTAAGCACGATCAAATAAACTGGCCAAAGATGAGGCTAATTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369207.3
CDS-3UTR CAA 90 bp GGAGAAGCAAATGGTAACCATTTTAACGAGACCCTAAATCATATAAAGTGGTTGTCTTTCCCCACTATTTaGCATATGGTGGGAGGCTTT +
Preference number: 5 (lower is better)
Translates to: GEANGNHFNETLNHIKWLSFPTI*HMVGGF
Trigger: AAAGCCTCCCACCATATGCAAAATAGTGGGGAAAGA...CAACCACTTTATATGATTTAGGGTCTCGTTAAAATGGTTACCATTTGCTTCTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341276.11
ENST00000622726.4
CDS-3UTR CAA 90 bp TTATTTCTGCTACTCCTCTGCTATAATCCCAACACTGGCTTACAAAAGAGCAATTCATGTCCAGCACAGTaGATAGCTAGATGCAGATTT +
Preference number: 5 (lower is better)
Translates to: LFLLLLCYNPNTGLQKSNSCPAQ*IARCRF
Trigger: AAATCTGCATCTAGCTATCAACTGTGCTGGACATGA...ATTGCTCTTTTGTAAGCCAGTGTTGGGATTATAGCAGAGGAGTAGCAGAAATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR CAA 90 bp ACATGGAAGTGTGGTGGCTGCAAAACGAAGTTCACAGAATTTCAGGCAAAAACAAGTTTAGAAATGCTTTaGGAAGCAGTTCCTGCAATT +
Preference number: 5 (lower is better)
Translates to: TWKCGGCKTKFTEFQAKTSLEML*EAVPAI
Trigger: AATTGCAGGAACTGCTTCCAAAAGCATTTCTAAACT...TGTTTTTGCCTGAAATTCTGTGAACTTCGTTTTGCAGCCACCACACTTCCATGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR CAA 90 bp CCTCATCTTTGGCCAGTTTATTTGATCGTGCTTACAGACTGCTCCATCACATATAGTTTAGAAATGCTTTaGGAAGCAGTTCCTGCAATT +
Preference number: 5 (lower is better)
Translates to: PHLWPVYLIVLTDCSITYSLEML*EAVPAI
Trigger: AATTGCAGGAACTGCTTCCAAAAGCATTTCTAAACT...ATATGTGATGGAGCAGTCTGTAAGCACGATCAAATAAACTGGCCAAAGATGAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369207.3
CDS-3UTR CAA 90 bp CCTCATCTTTGGCCAGTTTATTTGATCGTGCTTACAGACTGCTCCATCACATATTTACTGTCAATCAGATaGGTTATTTCCACCAAGTCA +
Preference number: 5 (lower is better)
Translates to: PHLWPVYLIVLTDCSITYLLSIR*VISTKS
Trigger: TGACTTGGTGGAAATAACCAATCTGATTGACAGTAA...ATATGTGATGGAGCAGTCTGTAAGCACGATCAAATAAACTGGCCAAAGATGAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369207.3
CDS-3UTR CAA 90 bp TCATCTTTGGCCAGTTTATTTGATCGTGCTTACAGACTGCTCCATCACATATGTATAATTGAAGGGTACTaGTTGATCAGATCCACATAC +
Preference number: 5 (lower is better)
Translates to: SSLASLFDRAYRLLHHICIIEGY*LIRSTY
Trigger: GTATGTGGATCTGATCAACAAGTACCCTTCAATTAT...ACATATGTGATGGAGCAGTCTGTAAGCACGATCAAATAAACTGGCCAAAGATGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369207.3
CDS-3UTR CAA 90 bp CCTGAAAAATGGACAGGAGAGCTAATAGACAAACAAAATCCACATGGAAGTGTGATAATTGAAGGGTACTaGTTGATCAGATCCACATAC +
Preference number: 5 (lower is better)
Translates to: PEKWTGELIDKQNPHGSVIIEGY*LIRSTY
Trigger: GTATGTGGATCTGATCAACAAGTACCCTTCAATTAT...CACACTTCCATGTGGATTTTGTTTGTCTATTAGCTCTCCTGTCCATTTTTCAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341276.11
ENST00000622726.4
CDS-3UTR CAA 90 bp CCTGAAAAATGGACAGGAGAGCTAATAGACAAACAAAATCCACATGGAAGTGTGTTACTGTCAATCAGATaGGTTATTTCCACCAAGTCA +
Preference number: 5 (lower is better)
Translates to: PEKWTGELIDKQNPHGSVLLSIR*VISTKS
Trigger: TGACTTGGTGGAAATAACCAATCTGATTGACAGTAA...CACACTTCCATGTGGATTTTGTTTGTCTATTAGCTCTCCTGTCCATTTTTCAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR CAA 90 bp TTATTTCTGCTACTCCTCTGCTATAATCCCAACACTGGCTTACAAAAGAGCAATAAAGTGTGTTCTTCTTaGAAACCCAGTGTTCCATTC +
Preference number: 5 (lower is better)
Translates to: LFLLLLCYNPNTGLQKSNKVCSS*KPSVPF
Trigger: GAATGGAACACTGGGTTTCAAAGAAGAACACACTTT...ATTGCTCTTTTGTAAGCCAGTGTTGGGATTATAGCAGAGGAGTAGCAGAAATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS-3UTR CAA 90 bp GGAGAAGCAAATGGTAACCATTTTAACGAGACCCTAAATCATATAAAGTGGTTGTTTATCACTTGCGGATaGCTTTTTAAATGCTGTGGT +
Preference number: 5 (lower is better)
Translates to: GEANGNHFNETLNHIKWLFITCG*LFKCCG
Trigger: ACCACAGCATTTAAAAAGCAATCCGCAAGTGATAAA...CAACCACTTTATATGATTTAGGGTCTCGTTAAAATGGTTACCATTTGCTTCTCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341276.11
ENST00000622726.4
CDS GCA 72 bp CCCTGGAGCTCGTGCGTGATGGTGCTGTTGACCCACTaGACGGCGGTGCTCACCGCGCTGGCCCTCTCTGCC +
Preference number: 6 (lower is better)
Translates to: PWSSCVMVLLTH*TAVLTALALSA
Trigger: GGCAGAGAGGGCCAGCGCGGTGAGCACCGCCGTGCAGTGGGTCAACAGCACCATCACGCACGAGCTCCAGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000341276.11
ENST00000622726.4
CDS CAA 72 bp GGTGCCATCCCCTGGAGCTCGTGCGTGATGGTGCTGTaGACCCACTGCACGGCGGTGCTCACCGCGCTGGCC +
Preference number: 6 (lower is better)
Translates to: GAIPWSSCVMVL*THCTAVLTALA
Trigger: GGCCAGCGCGGTGAGCACCGCCGTGCAGTGGGTCAACAGCACCATCACGCACGAGCTCCAGGGGATGGCACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341276.11
ENST00000622726.4
CDS CAA 90 bp TGGTCAGAGGGTGCCATCCCCTGGAGCTCGTGCGTGATGGTGCTGTaGACCCACTGCACGGCGGTGCTCACCGCGCTGGCCCTCTCTGCC +
Preference number: 6 (lower is better)
Translates to: WSEGAIPWSSCVMVL*THCTAVLTALALSA
Trigger: GGCAGAGAGGGCCAGCGCGGTGAGCACCGCCGTGCAGTGGGTCAACAGCACCATCACGCACGAGCTCCAGGGGATGGCACCCTCTGACCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341276.11
ENST00000622726.4
CDS GCA 72 bp TCTGCCTGGTCAGAGGGTGCCATCCCCTGGAGCTCGTaGGTGATGGTGCTGTTGACCCACTGCACGGCGGTG +
Preference number: 6 (lower is better)
Translates to: SAWSEGAIPWSS*VMVLLTHCTAV
Trigger: CACCGCCGTGCAGTGGGTCAACAGCACCATCACGCACGAGCTCCAGGGGATGGCACCCTCTGACCAGGCAGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341276.11
ENST00000622726.4
CDS GCA 72 bp GGGCACCAGCGGCTCCCTAGCCGCAGCAGCCTCAAGTaGCTCCGCAGCCTTTTCAGCTTCCTCATTAAAGTA +
Preference number: 6 (lower is better)
Translates to: GHQRLPSRSSLK*LRSLFSFLIKV
Trigger: TACTTTAATGAGGAAGCTGAAAAGGCTGCGGAGGCACTTGAGGCTGCTGCGGCTAGGGAGCCGCTGGTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS TCA 72 bp TGTACAGCCCTATCCAGAGGATGCTCCTGTTTCGGCTaGTTCCTCTACACCTTGTGTGGGGAAGGTGGGCAC +
Preference number: 6 (lower is better)
Translates to: CTALSRGCSCFG*FLYTLCGEGGH
Trigger: GTGCCCACCTTCCCCACACAAGGTGTAGAGGAATCAGCCGAAACAGGAGCATCCTCTGGATAGGGCTGTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS CCA 72 bp TCCCGGTCTACTAATACTGATGGTGTGGCTGGAACCTaGGGTGTGTACAGCCCTATCCAGAGGATGCTCCTG +
Preference number: 6 (lower is better)
Translates to: SRSTNTDGVAGT*GVYSPIQRMLL
Trigger: CAGGAGCATCCTCTGGATAGGGCTGTACACACCCCAGGTTCCAGCCACACCATCAGTATTAGTAGACCGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS CCA 72 bp TACTTCAGACCTCCCGGTCTACTAATACTGATGGTGTaGCTGGAACCTGGGGTGTGTACAGCCCTATCCAGA +
Preference number: 6 (lower is better)
Translates to: YFRPPGLLILMV*LEPGVCTALSR
Trigger: TCTGGATAGGGCTGTACACACCCCAGGTTCCAGCCACACCATCAGTATTAGTAGACCGGGAGGTCTGAAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000409522.5
ENST00000622726.4
CDS CAA 90 bp GCGATATTTAAGTACAGAGGTTTATTAAGCAGCATGGCACAGGCTTaGGCAACAGCTAGTGACACGGCCCCTATGGCCATACTGCCACTG +
Preference number: 6 (lower is better)
Translates to: AIFKYRGLLSSMAQA*ATASDTAPMAILPL
Trigger: CAGTGGCAGTATGGCCATAGGGGCCGTGTCACTAGCTGTTGCCAAAGCCTGTGCCATGCTGCTTAATAAACCTCTGTACTTAAATATCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000369207.3
ENST00000622726.4
CDS TCA 72 bp GCCAGCTCGGGCAGAGCATTCTCATGGACTTCAAAATaGGTCGAGATCACCACAGAACATACGTTCTTGGGA +
Preference number: 6 (lower is better)
Translates to: ASSGRAFSWTSK*VEITTEHTFLG
Trigger: TCCCAAGAACGTATGTTCTGTGGTGATCTCGACTCATTTTGAAGTCCATGAGAATGCTCTGCCCGAGCTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341276.11
ENST00000622726.4
CDS GCA 72 bp GGCCATACTGCCACTGAGTACAGGCTCAACAGGCTCTaGAGGCGCAATAGGTTTCTCTGTAATAGTATCCTT +
Preference number: 6 (lower is better)
Translates to: GHTATEYRLNRL*RRNRFLCNSIL
Trigger: AAGGATACTATTACAGAGAAACCTATTGCGCCTGCAGAGCCTGTTGAGCCTGTACTCAGTGGCAGTATGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000369207.3
ENST00000622726.4
CDS GCA 72 bp TCCATCAGCTCATGTCCAGCACAGTTGATAGCTAGATaGAGATTTGTTCCCAGTTCTAGCCCCAGGTTGGCA +
Preference number: 6 (lower is better)
Translates to: SISSCPAQLIAR*RFVPSSSPRLA
Trigger: TGCCAACCTGGGGCTAGAACTGGGAACAAATCTGCATCTAGCTATCAACTGTGCTGGACATGAGCTGATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341276.11
ENST00000369207.3
ENST00000409522.5
ENST00000622726.4
CDS CAA 72 bp GCTAGATGCAGATTTGTTCCCAGTTCTAGCCCCAGGTaGGCACAGATTTCCTGTATTAGAAGCAGTGGCTGT +
Preference number: 6 (lower is better)
Translates to: ARCRFVPSSSPR*AQISCIRSSGC
Trigger: ACAGCCACTGCTTCTAATACAGGAAATCTGTGCCAACCTGGGGCTAGAACTGGGAACAAATCTGCATCTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341276.11
ENST00000369207.3
ENST00000409522.5
ENST00000622726.4
CDS CAA 72 bp TTTCCTGTTCTTGCCCTCCAATCCTGGCATCACAGCTaGAAGATGAAGTGGCCAGTGTTCCATTCTGGACAA +
Preference number: 6 (lower is better)
Translates to: FPVLALQSWHHS*KMKWPVFHSGQ
Trigger: TTGTCCAGAATGGAACACTGGCCACTTCATCTTCAAGCTGTGATGCCAGGATTGGAGGGCAAGAACAGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369207.3
CDS CAA 90 bp CAGTTGATAGCTAGATGCAGATTTGTTCCCAGTTCTAGCCCCAGGTaGGCACAGATTTCCTGTATTAGAAGCAGTGGCTGTTCTATGGAG +
Preference number: 6 (lower is better)
Translates to: QLIARCRFVPSSSPR*AQISCIRSSGCSME
Trigger: CTCCATAGAACAGCCACTGCTTCTAATACAGGAAATCTGTGCCAACCTGGGGCTAGAACTGGGAACAAATCTGCATCTAGCTATCAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341276.11
ENST00000369207.3
ENST00000409522.5
ENST00000622726.4
CDS GCA 72 bp CAATTATGTAACACCTGGAACCAAGTGCGTGATAGATaGTGTCCCACTGTTCAGAGTCGTAGTCCATCAGCT +
Preference number: 6 (lower is better)
Translates to: QLCNTWNQVRDR*CPTVQSRSPSA
Trigger: AGCTGATGGACTACGACTCTGAACAGTGGGACAGCATCTATCACGCACTTGGTTCCAGGTGTTACATAATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409522.5
CDS CCA 72 bp CTAGATGCAGATTTGTTCCCAGTTCTAGCCCCAGGTTaGCACAGATTTCCTGTATTAGAAGCAGTGGCTGTT +
Preference number: 6 (lower is better)
Translates to: LDADLFPVLAPG*HRFPVLEAVAV
Trigger: AACAGCCACTGCTTCTAATACAGGAAATCTGTGCCAACCTGGGGCTAGAACTGGGAACAAATCTGCATCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341276.11
ENST00000369207.3
ENST00000409522.5
ENST00000622726.4
CDS CAA 72 bp TTCTGGACAAGTTCTTCCTCTATAGTGAGAAGGCGGTaGTATTTAGTCACTCGTTCACCACGGGAAAGACCC +
Preference number: 6 (lower is better)
Translates to: FWTSSSSIVRRR*YLVTRSPRERP
Trigger: GGGTCTTTCCCGTGGTGAACGAGTGACTAAATACAACCGCCTTCTCACTATAGAGGAAGAACTTGTCCAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341276.11
ENST00000369207.3
ENST00000409522.5
ENST00000622726.4
CDS CCA 72 bp TCACCACAGAACATACGTTCTTGGGAAAGTTTTGAATaGTGCAGAATATGTCCACTTGCAGGGTTGGAAGCC +
Preference number: 6 (lower is better)
Translates to: SPQNIRSWESFE*CRICPLAGLEA
Trigger: GGCTTCCAACCCTGCAAGTGGACATATTCTGCACCATTCAAAACTTTCCCAAGAACGTATGTTCTGTGGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341276.11
ENST00000622726.4
CDS GCA 72 bp GTTGATCAGATCCACATACAGGTCAACCATCTCCGCTaGATTTTTGTATGTGCCCATGATCACTTCATACTT +
Preference number: 6 (lower is better)
Translates to: VDQIHIQVNHLR*IFVCAHDHFIL
Trigger: AAGTATGAAGTGATCATGGGCACATACAAAAATGCAGCGGAGATGGTTGACCTGTATGTGGATCTGATCAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000369207.3
ENST00000622726.4
CDS CAA 72 bp TGTTCTAAAAGAGTGGTTACACTTTCACCAAAGTCATaGTTTCCTGTTCTTGCCCTCCAATCCTGGCATCAC +
Preference number: 6 (lower is better)
Translates to: CSKRVVTLSPKS*FPVLALQSWHH
Trigger: GTGATGCCAGGATTGGAGGGCAAGAACAGGAAACAATGACTTTGGTGAAAGTGTAACCACTCTTTTAGAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369207.3
CDS CAA 90 bp TCCTCCTTCCTGAAAGGATCAATTAAGGCAATAATTGAAGGGTACTaGTTGATCAGATCCACATACAGGTCAACCATCTCCGCTGCATTT +
Preference number: 6 (lower is better)
Translates to: SSFLKGSIKAIIEGY*LIRSTYRSTISAAF
Trigger: AAATGCAGCGGAGATGGTTGACCTGTATGTGGATCTGATCAACAAGTACCCTTCAATTATTGCCTTAATTGATCCTTTCAGGAAGGAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000369207.3
ENST00000622726.4
CDS CAA 90 bp TGCTGTTTTTGTTCTAAAAGAGTGGTTACACTTTCACCAAAGTCATaGTTTCCTGTTCTTGCCCTCCAATCCTGGCATCACAGCTTGAAG +
Preference number: 6 (lower is better)
Translates to: CCFCSKRVVTLSPKS*FPVLALQSWHHSLK
Trigger: CTTCAAGCTGTGATGCCAGGATTGGAGGGCAAGAACAGGAAACAATGACTTTGGTGAAAGTGTAACCACTCTTTTAGAACAAAAACAGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369207.3
CDS TCA 72 bp GGTCAACCATCTCCGCTGCATTTTTGTATGTGCCCATaGTCACTTCATACTTTCCTTTATTGTAGTCCATCA +
Preference number: 6 (lower is better)
Translates to: GQPSPLHFCMCP*SLHTFLYCSPS
Trigger: TGATGGACTACAATAAAGGAAAGTATGAAGTGATCATGGGCACATACAAAAATGCAGCGGAGATGGTTGACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000369207.3
ENST00000622726.4
CDS CAA 72 bp AGATCCACATACAGGTCAACCATCTCCGCTGCATTTTaGTATGTGCCCATGATCACTTCATACTTTCCTTTA +
Preference number: 6 (lower is better)
Translates to: RSTYRSTISAAF*YVPMITSYFPL
Trigger: TAAAGGAAAGTATGAAGTGATCATGGGCACATACAAAAATGCAGCGGAGATGGTTGACCTGTATGTGGATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000369207.3
ENST00000622726.4
CDS CAA 90 bp TCCTTCCTGAAAGGATCAATTAAGGCAATAATTGAAGGGTACTTGTaGATCAGATCCACATACAGGTCAACCATCTCCGCTGCATTTTTG +
Preference number: 6 (lower is better)
Translates to: SFLKGSIKAIIEGYL*IRSTYRSTISAAFL
Trigger: CAAAAATGCAGCGGAGATGGTTGACCTGTATGTGGATCTGATCAACAAGTACCCTTCAATTATTGCCTTAATTGATCCTTTCAGGAAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000369207.3
ENST00000622726.4
CDS CAA 90 bp ACTGTCAATCAGATTGGTTATTTCCACCAAGTCAGACATTGTAGTTaGGTTTGTGTGTTTTATGATCAGCCCATTGGATTTGGGGATGCT +
Preference number: 6 (lower is better)
Translates to: TVNQIGYFHQVRHCS*VCVFYDQPIGFGDA
Trigger: AGCATCCCCAAATCCAATGGGCTGATCATAAAACACACAAACCAAACTACAATGTCTGACTTGGTGGAAATAACCAATCTGATTGACAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341276.11
ENST00000369207.3
ENST00000409522.5
ENST00000622726.4
CDS CAA 72 bp AAAGGATCAATTAAGGCAATAATTGAAGGGTACTTGTaGATCAGATCCACATACAGGTCAACCATCTCCGCT +
Preference number: 6 (lower is better)
Translates to: KGSIKAIIEGYL*IRSTYRSTISA
Trigger: AGCGGAGATGGTTGACCTGTATGTGGATCTGATCAACAAGTACCCTTCAATTATTGCCTTAATTGATCCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000369207.3
ENST00000622726.4
CDS CAA 72 bp CTGAAAGGATCAATTAAGGCAATAATTGAAGGGTACTaGTTGATCAGATCCACATACAGGTCAACCATCTCC +
Preference number: 6 (lower is better)
Translates to: LKGSIKAIIEGY*LIRSTYRSTIS
Trigger: GGAGATGGTTGACCTGTATGTGGATCTGATCAACAAGTACCCTTCAATTATTGCCTTAATTGATCCTTTCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000341276.11
ENST00000369207.3
ENST00000622726.4