RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ENO2 (Homo sapiens)

Ensembl gene IDs: ENSG00000111674

Ensembl transcript IDs: ENST00000229277.6, ENST00000441285.2, ENST00000535275.5, ENST00000535366.5, ENST00000536199.5, ENST00000538763.5, ENST00000539713.5, ENST00000541477.5, ENST00000542509.1, ENST00000543975.1, ENST00000545045.6

Found 406 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CAGAGGTGGTGGCAACTGTGGAACGTGGCATGGGGAGTGAGAGGTTaGTCTGGTGCAGCTGGAGGAAGAACAGGGAACCTAGGGTTGGGG +
Preference number: 1 (lower is better)
Translates to: QRWWQLWNVAWGVRG*SGAAGGRTGNLGLG
Trigger: CCCCAACCCTAGGTTCCCTGTTCTTCCTCCAGCTGCACCAGAGCAACCTCTCACTCCCCATGCCACGTTCCACAGTTGCCACCACCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
3UTR CCA 90 bp CTCATTTCAATGCCACAGAGGTGGTGGCAACTGTGGAACGTGGCATaGGGAGTGAGAGGTTGCTCTGGTGCAGCTGGAGGAAGAACAGGG +
Preference number: 1 (lower is better)
Translates to: LISMPQRWWQLWNVA*GVRGCSGAAGGRTG
Trigger: CCCTGTTCTTCCTCCAGCTGCACCAGAGCAACCTCTCACTCCCCATGCCACGTTCCACAGTTGCCACCACCTCTGTGGCATTGAAATGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
3UTR GCA 90 bp CCAGGCGTGATCACATGCCCAACACTCCCCTCCATCCCAGCACTATaGACAGTTCACGGCTCATATGCAAAGTGGAAGACACGTGGGACA +
Preference number: 1 (lower is better)
Translates to: PGVITCPTLPSIPAL*TVHGSYAKWKTRGT
Trigger: TGTCCCACGTGTCTTCCACTTTGCATATGAGCCGTGAACTGTGCATAGTGCTGGGATGGAGGGGAGTGTTGGGCATGTGATCACGCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
3UTR CCA 90 bp TTAATGGAGGTGCTCATTTCAATGCCACAGAGGTGGTGGCAACTGTaGAACGTGGCATGGGGAGTGAGAGGTTGCTCTGGTGCAGCTGGA +
Preference number: 1 (lower is better)
Translates to: LMEVLISMPQRWWQL*NVAWGVRGCSGAAG
Trigger: TCCAGCTGCACCAGAGCAACCTCTCACTCCCCATGCCACGTTCCACAGTTGCCACCACCTCTGTGGCATTGAAATGAGCACCTCCATTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
3UTR CCA 90 bp ACAGAGGTTCCACGTCTCCAGGCAAGCAGAGGAATCACAGCACACTaGGATTACGGAAGTTATGTCCGGCAAAGCGAGCTTCATCCCCCA +
Preference number: 1 (lower is better)
Translates to: TEVPRLQASRGITAH*DYGSYVRQSELHPP
Trigger: TGGGGGATGAAGCTCGCTTTGCCGGACATAACTTCCGTAATCCCAGTGTGCTGTGATTCCTCTGCTTGCCTGGAGACGTGGAACCTCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543975.1
3UTR GCA 90 bp AACACTCCCCTCCATCCCAGCACTATGCACAGTTCACGGCTCATATaGAAAGTGGAAGACACGTGGGACAAGAGCAAAGCACAAGTGACA +
Preference number: 1 (lower is better)
Translates to: NTPLHPSTMHSSRLI*KVEDTWDKSKAQVT
Trigger: TGTCACTTGTGCTTTGCTCTTGTCCCACGTGTCTTCCACTTTGCATATGAGCCGTGAACTGTGCATAGTGCTGGGATGGAGGGGAGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
3UTR CCA 90 bp ATTCAGACTTTAATGGAGGTGCTCATTTCAATGCCACAGAGGTGGTaGCAACTGTGGAACGTGGCATGGGGAGTGAGAGGTTGCTCTGGT +
Preference number: 1 (lower is better)
Translates to: IQTLMEVLISMPQRW*QLWNVAWGVRGCSG
Trigger: ACCAGAGCAACCTCTCACTCCCCATGCCACGTTCCACAGTTGCCACCACCTCTGTGGCATTGAAATGAGCACCTCCATTAAAGTCTGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
3UTR CCA 90 bp CTGATTCAGACTTTAATGGAGGTGCTCATTTCAATGCCACAGAGGTaGTGGCAACTGTGGAACGTGGCATGGGGAGTGAGAGGTTGCTCT +
Preference number: 1 (lower is better)
Translates to: LIQTLMEVLISMPQR*WQLWNVAWGVRGCS
Trigger: AGAGCAACCTCTCACTCCCCATGCCACGTTCCACAGTTGCCACCACCTCTGTGGCATTGAAATGAGCACCTCCATTAAAGTCTGAATCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
3UTR-3UTR TCA 90 bp GGAGCAGCGGAGCAGGTCAATCAGGGAAGTTCTGGGCACCCTGGGGCTCAGGGGAAGGTTCCAGGAGGATaGGACAGAGGTTCCACGTCT +
Preference number: 2 (lower is better)
Translates to: GAAEQVNQGSSGHPGAQGKVPGG*DRGSTS
Trigger: AGACGTGGAACCTCTGTCTCATCCTCCTGGAACCTT...CCCCTGAGCCCCAGGGTGCCCAGAACTTCCCTGATTGACCTGCTCCGCTGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000538763.5
ENST00000541477.5
ENST00000545045.6
3UTR CAA 90 bp ACAGAGGTGGTGGCAACTGTGGAACGTGGCATGGGGAGTGAGAGGTaGCTCTGGTGCAGCTGGAGGAAGAACAGGGAACCTAGGGTTGGG +
Preference number: 2 (lower is better)
Translates to: TEVVATVERGMGSER*LWCSWRKNREPRVG
Trigger: CCCAACCCTAGGTTCCCTGTTCTTCCTCCAGCTGCACCAGAGCAACCTCTCACTCCCCATGCCACGTTCCACAGTTGCCACCACCTCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
3UTR-3UTR CCA 90 bp ACCCCAATGAGTAGGGCACAGAAAGGAGGGCGAGCAGAGACAGCAAGAGGTCAGAAGTTCTGGGCACCCTaGGGCTCAGGGGATCTCAGG +
Preference number: 2 (lower is better)
Translates to: TPMSRAQKGGRAETARGQKFWAP*GSGDLR
Trigger: CCTGAGATCCCCTGAGCCCCAGGGTGCCCAGAACTT...CTGACCTCTTGCTGTCTCTGCTCGCCCTCCTTTCTGTGCCCTACTCATTGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000538763.5
ENST00000541477.5
ENST00000545045.6
3UTR-3UTR CCA 90 bp GTGACACATGGTCCCTCTCTAACACCTCAGCACACCAACCCTGACGCTCCCATCAAGTTCTGGGCACCCTaGGGCTCAGGGGATCTCAGG +
Preference number: 2 (lower is better)
Translates to: VTHGPSLTPQHTNPDAPIKFWAP*GSGDLR
Trigger: CCTGAGATCCCCTGAGCCCCAGGGTGCCCAGAACTT...GATGGGAGCGTCAGGGTTGGTGTGCTGAGGTGTTAGAGAGGGACCATGTGTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000538763.5
ENST00000541477.5
ENST00000545045.6
3UTR-3UTR CCA 90 bp ACAGAAAGGAGGGCGAGCAGAGACAGCAAGAGGTCAGGTAAGCCAAGGAGCAGCAAGTTCTGGGCACCCTaGGGCTCAGGGGATCTCAGG +
Preference number: 2 (lower is better)
Translates to: TERRASRDSKRSGKPRSSKFWAP*GSGDLR
Trigger: CCTGAGATCCCCTGAGCCCCAGGGTGCCCAGAACTT...GCTGCTCCTTGGCTTACCTGACCTCTTGCTGTCTCTGCTCGCCCTCCTTTCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000538763.5
ENST00000541477.5
ENST00000545045.6
3UTR-3UTR CCA 90 bp CCAACCCTGACGCTCCCATCACAGATGCTGATCATTCTTCCACGGACCCCCTTTCAATCAGGGAAGTTCTaGGCACCCTGGGGCTCAGGG +
Preference number: 2 (lower is better)
Translates to: PTLTLPSQMLIILPRTPFQSGKF*APWGSG
Trigger: CCCTGAGCCCCAGGGTGCCCAGAACTTCCCTGATTG...AAAGGGGGTCCGTGGAAGAATGATCAGCATCTGTGATGGGAGCGTCAGGGTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000538763.5
ENST00000541477.5
ENST00000545045.6
3UTR-3UTR TCA 90 bp CCAGGCACACAGCCTCCGCTCTGGACCAACGCAGGCTTCAGTGAGTACACACAAAAGGTTCCAGGAGGATaGGACAGAGGTTCCACGTCT +
Preference number: 2 (lower is better)
Translates to: PGTQPPLWTNAGFSEYTQKVPGG*DRGSTS
Trigger: AGACGTGGAACCTCTGTCTCATCCTCCTGGAACCTT...TTGTGTGTACTCACTGAAGCCTGCGTTGGTCCAGAGCGGAGGCTGTGTGCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
3UTR-3UTR TCA 90 bp GTGGCATGGGGAGTGAGAGGTTGCTCTGGTGCAGCTGGAGGAAGAACAGGGAACCTTATTAGCCAGGCGTaGTCACATGCCCAACACTCC +
Preference number: 2 (lower is better)
Translates to: VAWGVRGCSGAAGGRTGNLISQA*SHAQHS
Trigger: GGAGTGTTGGGCATGTGATCACGCCTGGCTAATAAG...GTTCCCTGTTCTTCCTCCAGCTGCACCAGAGCAACCTCTCACTCCCCATGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
3UTR-3UTR GCA 90 bp AGAGGAAAACTCCCCCAGGCACACAGCCTCCGCTCTGGACCAACGCAGGCTTCAGGAAGAAGTGGAAAGTaGGGAACCCCAATGAGTAGG +
Preference number: 2 (lower is better)
Translates to: RGKLPQAHSLRSGPTQASGRSGK*GTPMSR
Trigger: CCTACTCATTGGGGTTCCGCACTTTCCACTTCTTCC...TGAAGCCTGCGTTGGTCCAGAGCGGAGGCTGTGTGCCTGGGGGAGTTTTCCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
3UTR-3UTR GCA 90 bp CTCATTTCAATGCCACAGAGGTGGTGGCAACTGTGGAACGTGGCATGGGGAGTGCCAGGCGTGATCACATaGCCAACACTCCCCTCCATC +
Preference number: 2 (lower is better)
Translates to: LISMPQRWWQLWNVAWGVPGVIT*PTLPSI
Trigger: GATGGAGGGGAGTGTTGGGCATGTGATCACGCCTGG...CACTCCCCATGCCACGTTCCACAGTTGCCACCACCTCTGTGGCATTGAAATGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
3UTR-3UTR TCA 90 bp GTGACACATGGTCCCTCTCTAACACCTCAGCACACCAACCCTGACGCTCCCATCAAGGTTCCAGGAGGATaGGACAGAGGTTCCACGTCT +
Preference number: 2 (lower is better)
Translates to: VTHGPSLTPQHTNPDAPIKVPGG*DRGSTS
Trigger: AGACGTGGAACCTCTGTCTCATCCTCCTGGAACCTT...GATGGGAGCGTCAGGGTTGGTGTGCTGAGGTGTTAGAGAGGGACCATGTGTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000538763.5
ENST00000541477.5
ENST00000545045.6
3UTR-3UTR TCA 90 bp TGGAACGTGGCATGGGGAGTGAGAGGTTGCTCTGGTGCAGCTGGAGGAAGAACATCCCATCACAGATGCTaGTCATTCTTCCACGGACCC +
Preference number: 2 (lower is better)
Translates to: WNVAWGVRGCSGAAGGRTSHHRC*SFFHGP
Trigger: GGGTCCGTGGAAGAATGATCAGCATCTGTGATGGGA...TGTTCTTCCTCCAGCTGCACCAGAGCAACCTCTCACTCCCCATGCCACGTTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
3UTR-3UTR TCA 90 bp CCTTTCTATGACCCTTCCCATTCTAGCAAGACCTCCCACCCCAGTCATCTTGGGTCAGCACACCAACCCTaGCGCTCCCATCACAGATGC +
Preference number: 2 (lower is better)
Translates to: PFYDPSHSSKTSHPSHLGSAHQP*RSHHRC
Trigger: GCATCTGTGATGGGAGCGTCAGGGTTGGTGTGCTGA...CCCAAGATGACTGGGGTGGGAGGTCTTGCTAGAATGGGAAGGGTCATAGAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
3UTR-3UTR GCA 90 bp AGAGGAAAACTCCCCCAGGCACACAGCCTCCGCTCTGGACCAACGCAGGCTTCATCCATCCCAGCACTATaGACAGTTCACGGCTCATAT +
Preference number: 2 (lower is better)
Translates to: RGKLPQAHSLRSGPTQASSIPAL*TVHGSY
Trigger: ATATGAGCCGTGAACTGTGCATAGTGCTGGGATGGA...TGAAGCCTGCGTTGGTCCAGAGCGGAGGCTGTGTGCCTGGGGGAGTTTTCCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
3UTR-3UTR GCA 90 bp CCTTTCTATGACCCTTCCCATTCTAGCAAGACCTCCCACCCCAGTCATCTTGGGCCAGGCGTGATCACATaGCCAACACTCCCCTCCATC +
Preference number: 2 (lower is better)
Translates to: PFYDPSHSSKTSHPSHLGPGVIT*PTLPSI
Trigger: GATGGAGGGGAGTGTTGGGCATGTGATCACGCCTGG...CCCAAGATGACTGGGGTGGGAGGTCTTGCTAGAATGGGAAGGGTCATAGAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
3UTR-3UTR GCA 90 bp GAGGTGCTCATTTCAATGCCACAGAGGTGGTGGCAACTGTGGAACGTGGCATGGGAGAGGTTGCTCTGGTaGAGCTGGAGGAAGAACAGG +
Preference number: 2 (lower is better)
Translates to: EVLISMPQRWWQLWNVAWERLLW*SWRKNR
Trigger: CCTGTTCTTCCTCCAGCTGCACCAGAGCAACCTCTC...CCATGCCACGTTCCACAGTTGCCACCACCTCTGTGGCATTGAAATGAGCACCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
3UTR-3UTR TCA 90 bp GCACAAGTGACACATGGTCCCTCTCTAACACCTCAGCACACCAACCCTGACGCTAAGGTTCCAGGAGGATaGGACAGAGGTTCCACGTCT +
Preference number: 2 (lower is better)
Translates to: AQVTHGPSLTPQHTNPDAKVPGG*DRGSTS
Trigger: AGACGTGGAACCTCTGTCTCATCCTCCTGGAACCTT...AGCGTCAGGGTTGGTGTGCTGAGGTGTTAGAGAGGGACCATGTGTCACTTGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000538763.5
ENST00000541477.5
ENST00000545045.6
3UTR-3UTR TCA 90 bp TGGAACGTGGCATGGGGAGTGAGAGGTTGCTCTGGTGCAGCTGGAGGAAGAACACAACGCAGGCTTCAGTaGGTACACACAAAGGAACTG +
Preference number: 2 (lower is better)
Translates to: WNVAWGVRGCSGAAGGRTQRRLQ*VHTKEL
Trigger: CAGTTCCTTTGTGTGTACTCACTGAAGCCTGCGTTG...TGTTCTTCCTCCAGCTGCACCAGAGCAACCTCTCACTCCCCATGCCACGTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
3UTR-3UTR GCA 90 bp GTGACACATGGTCCCTCTCTAACACCTCAGCACACCAACCCTGACGCTCCCATCGGAAGAAGTGGAAAGTaGGGAACCCCAATGAGTAGG +
Preference number: 2 (lower is better)
Translates to: VTHGPSLTPQHTNPDAPIGRSGK*GTPMSR
Trigger: CCTACTCATTGGGGTTCCGCACTTTCCACTTCTTCC...GATGGGAGCGTCAGGGTTGGTGTGCTGAGGTGTTAGAGAGGGACCATGTGTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000538763.5
ENST00000541477.5
ENST00000545045.6
3UTR-3UTR GCA 90 bp GCCTTATTAGCCAGGCGTGATCACATGCCCAACACTCCCCTCCATCCCAGCACTGGAAGAAGTGGAAAGTaGGGAACCCCAATGAGTAGG +
Preference number: 2 (lower is better)
Translates to: ALLARRDHMPNTPLHPSTGRSGK*GTPMSR
Trigger: CCTACTCATTGGGGTTCCGCACTTTCCACTTCTTCC...AGTGCTGGGATGGAGGGGAGTGTTGGGCATGTGATCACGCCTGGCTAATAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
3UTR-3UTR CCA 90 bp AGAGGAAAACTCCCCCAGGCACACAGCCTCCGCTCTGGACCAACGCAGGCTTCAAGAGAAAGGAAGAAGTaGAAAGTGCGGAACCCCAAT +
Preference number: 2 (lower is better)
Translates to: RGKLPQAHSLRSGPTQASRERKK*KVRNPN
Trigger: ATTGGGGTTCCGCACTTTCCACTTCTTCCTTTCTCT...TGAAGCCTGCGTTGGTCCAGAGCGGAGGCTGTGTGCCTGGGGGAGTTTTCCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
3UTR-3UTR TCA 90 bp ACCCTGACGCTCCCATCACAGATGCTGATCATTCTTCCACGGACCCCCTTTTATGGGGATCTCAGGGGGTaGACTATCACAGATCAGGAC +
Preference number: 2 (lower is better)
Translates to: TLTLPSQMLIILPRTPFYGDLRG*TITDQD
Trigger: GTCCTGATCTGTGATAGTTCACCCCCTGAGATCCCC...ATAAAAGGGGGTCCGTGGAAGAATGATCAGCATCTGTGATGGGAGCGTCAGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000538763.5
ENST00000541477.5
ENST00000545045.6
3UTR-3UTR TCA 90 bp GAGGTGCTCATTTCAATGCCACAGAGGTGGTGGCAACTGTGGAACGTGGCATGGCAACGCAGGCTTCAGTaGGTACACACAAAGGAACTG +
Preference number: 2 (lower is better)
Translates to: EVLISMPQRWWQLWNVAWQRRLQ*VHTKEL
Trigger: CAGTTCCTTTGTGTGTACTCACTGAAGCCTGCGTTG...CCATGCCACGTTCCACAGTTGCCACCACCTCTGTGGCATTGAAATGAGCACCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
3UTR-3UTR GCA 90 bp GCACAAGTGACACATGGTCCCTCTCTAACACCTCAGCACACCAACCCTGACGCTGGAAGAAGTGGAAAGTaGGGAACCCCAATGAGTAGG +
Preference number: 2 (lower is better)
Translates to: AQVTHGPSLTPQHTNPDAGRSGK*GTPMSR
Trigger: CCTACTCATTGGGGTTCCGCACTTTCCACTTCTTCC...AGCGTCAGGGTTGGTGTGCTGAGGTGTTAGAGAGGGACCATGTGTCACTTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000538763.5
ENST00000541477.5
ENST00000545045.6
3UTR-3UTR TCA 90 bp GATCTACAGCCACATGAAATACAGACACATCGTTCCCCCAAGTCAGGCCAGTTTTCAGCACACCAACCCTaGCGCTCCCATCACAGATGC +
Preference number: 2 (lower is better)
Translates to: DLQPHEIQTHRSPKSGQFSAHQP*RSHHRC
Trigger: GCATCTGTGATGGGAGCGTCAGGGTTGGTGTGCTGA...AAACTGGCCTGACTTGGGGGAACGATGTGTCTGTATTTCATGTGGCTGTAGATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
3UTR-3UTR GCA 90 bp GACTTTAATGGAGGTGCTCATTTCAATGCCACAGAGGTGGTGGCAACTGTGGAATGGGGAGTGAGAGGTTaGTCTGGTGCAGCTGGAGGA +
Preference number: 2 (lower is better)
Translates to: DFNGGAHFNATEVVATVEWGVRG*SGAAGG
Trigger: TCCTCCAGCTGCACCAGAGCAACCTCTCACTCCCCA...TTCCACAGTTGCCACCACCTCTGTGGCATTGAAATGAGCACCTCCATTAAAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
3UTR-3UTR CCA 90 bp GCCTTATTAGCCAGGCGTGATCACATGCCCAACACTCCCCTCCATCCCAGCACTAGAGAAAGGAAGAAGTaGAAAGTGCGGAACCCCAAT +
Preference number: 2 (lower is better)
Translates to: ALLARRDHMPNTPLHPSTRERKK*KVRNPN
Trigger: ATTGGGGTTCCGCACTTTCCACTTCTTCCTTTCTCT...AGTGCTGGGATGGAGGGGAGTGTTGGGCATGTGATCACGCCTGGCTAATAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
3UTR-3UTR CCA 90 bp TGGAACGTGGCATGGGGAGTGAGAGGTTGCTCTGGTGCAGCTGGAGGAAGAACAAGAGAAAGGAAGAAGTaGAAAGTGCGGAACCCCAAT +
Preference number: 2 (lower is better)
Translates to: WNVAWGVRGCSGAAGGRTRERKK*KVRNPN
Trigger: ATTGGGGTTCCGCACTTTCCACTTCTTCCTTTCTCT...TGTTCTTCCTCCAGCTGCACCAGAGCAACCTCTCACTCCCCATGCCACGTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
3UTR-3UTR CCA 90 bp GTGCTCATTTCAATGCCACAGAGGTGGTGGCAACTGTGGAACGTGGCATGGGGAGGCTCATATGCAAAGTaGAAGACACGTGGGACAAGA +
Preference number: 2 (lower is better)
Translates to: VLISMPQRWWQLWNVAWGGSYAK*KTRGTR
Trigger: TCTTGTCCCACGTGTCTTCCACTTTGCATATGAGCC...TCCCCATGCCACGTTCCACAGTTGCCACCACCTCTGTGGCATTGAAATGAGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
3UTR-3UTR CCA 90 bp CACTGGGATTACGGAAGTTATGTCCGGCAAAGCGAGCTTCATCCCCCAGCTCTTCAAATGGGTCCTCAATaGAGACCACTGCAGAGAGAG +
Preference number: 2 (lower is better)
Translates to: HWDYGSYVRQSELHPPALQMGPQ*RPLQRE
Trigger: CTCTCTCTGCAGTGGTCTCCATTGAGGACCCATTTG...AAGAGCTGGGGGATGAAGCTCGCTTTGCCGGACATAACTTCCGTAATCCCAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535275.5
3UTR-3UTR TCA 90 bp CTCATTTCAATGCCACAGAGGTGGTGGCAACTGTGGAACGTGGCATGGGGAGTGGGATCTACAGCCACATaGAATACAGACACATCGTTC +
Preference number: 2 (lower is better)
Translates to: LISMPQRWWQLWNVAWGVGSTAT*NTDTSF
Trigger: GAACGATGTGTCTGTATTTCATGTGGCTGTAGATCC...CACTCCCCATGCCACGTTCCACAGTTGCCACCACCTCTGTGGCATTGAAATGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
3UTR-3UTR CCA 90 bp TGGGATTACGGAAGTTATGTCCGGCAAAGCGAGCTTCATCCCCCAGCTCTTCCTTCATCACCCACAATCTaGATCCCTACATTGGCTGTG +
Preference number: 2 (lower is better)
Translates to: WDYGSYVRQSELHPPALPSSPTI*IPTLAV
Trigger: CACAGCCAATGTAGGGATCCAGATTGTGGGTGATGA...AGGAAGAGCTGGGGGATGAAGCTCGCTTTGCCGGACATAACTTCCGTAATCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535275.5
3UTR-3UTR GCA 90 bp TGGGATCTACAGCCACATGAAATACAGACACATCGTTCCCCCAAGTCAGGCCAGTCCATCCCAGCACTATaGACAGTTCACGGCTCATAT +
Preference number: 2 (lower is better)
Translates to: WDLQPHEIQTHRSPKSGQSIPAL*TVHGSY
Trigger: ATATGAGCCGTGAACTGTGCATAGTGCTGGGATGGA...CTGGCCTGACTTGGGGGAACGATGTGTCTGTATTTCATGTGGCTGTAGATCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
3UTR-3UTR CCA 90 bp CCATCACAGATGCTGATCATTCTTCCACGGACCCCCTTTTATAATAATCCTCATAAGTTCTGGGCACCCTaGGGCTCAGGGGATCTCAGG +
Preference number: 2 (lower is better)
Translates to: PSQMLIILPRTPFYNNPHKFWAP*GSGDLR
Trigger: CCTGAGATCCCCTGAGCCCCAGGGTGCCCAGAACTT...ATGAGGATTATTATAAAAGGGGGTCCGTGGAAGAATGATCAGCATCTGTGATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000538763.5
ENST00000541477.5
ENST00000545045.6
3UTR-3UTR CCA 90 bp AGAGGAATCACAGCACACTGGGATTACGGAAGTTATGTCCGGCAAAGCGAGCTTCCGCTCAATACGTTTTaGGTTGGTCACTGTCAGGTC +
Preference number: 2 (lower is better)
Translates to: RGITAHWDYGSYVRQSELPLNTF*VGHCQV
Trigger: GACCTGACAGTGACCAACCCAAAACGTATTGAGCGG...AAGCTCGCTTTGCCGGACATAACTTCCGTAATCCCAGTGTGCTGTGATTCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535275.5
3UTR-3UTR GCA 90 bp CTGACGCTCCCATCACAGATGCTGATCATTCTTCCACGGACCCCCTTTTATAATGGAAGAAGTGGAAAGTaGGGAACCCCAATGAGTAGG +
Preference number: 2 (lower is better)
Translates to: LTLPSQMLIILPRTPFYNGRSGK*GTPMSR
Trigger: CCTACTCATTGGGGTTCCGCACTTTCCACTTCTTCC...ATTATAAAAGGGGGTCCGTGGAAGAATGATCAGCATCTGTGATGGGAGCGTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000538763.5
ENST00000541477.5
ENST00000545045.6
3UTR-3UTR CCA 90 bp ACCCTGACGCTCCCATCACAGATGCTGATCATTCTTCCACGGACCCCCTTTTATAGAGAAAGGAAGAAGTaGAAAGTGCGGAACCCCAAT +
Preference number: 2 (lower is better)
Translates to: TLTLPSQMLIILPRTPFYRERKK*KVRNPN
Trigger: ATTGGGGTTCCGCACTTTCCACTTCTTCCTTTCTCT...ATAAAAGGGGGTCCGTGGAAGAATGATCAGCATCTGTGATGGGAGCGTCAGGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000538763.5
ENST00000541477.5
ENST00000545045.6
3UTR-3UTR TCA 90 bp CCTTTCTATGACCCTTCCCATTCTAGCAAGACCTCCCACCCCAGTCATCTTGGGCACATTTCTAGTTTCTaGGGGAAGAGAGAAAGAGAA +
Preference number: 2 (lower is better)
Translates to: PFYDPSHSSKTSHPSHLGHISSF*GKRERE
Trigger: TTCTCTTTCTCTCTTCCCTCAGAAACTAGAAATGTG...CCCAAGATGACTGGGGTGGGAGGTCTTGCTAGAATGGGAAGGGTCATAGAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
3UTR-3UTR CCA 90 bp GATCTACAGCCACATGAAATACAGACACATCGTTCCCCCAAGTCAGGCCAGTTTGGCTCATATGCAAAGTaGAAGACACGTGGGACAAGA +
Preference number: 2 (lower is better)
Translates to: DLQPHEIQTHRSPKSGQFGSYAK*KTRGTR
Trigger: TCTTGTCCCACGTGTCTTCCACTTTGCATATGAGCC...AAACTGGCCTGACTTGGGGGAACGATGTGTCTGTATTTCATGTGGCTGTAGATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
3UTR-3UTR TCA 90 bp GACTTTAATGGAGGTGCTCATTTCAATGCCACAGAGGTGGTGGCAACTGTGGAATACACACAAAGGAACTaGTGTCAAGGCCCTTTCTAT +
Preference number: 2 (lower is better)
Translates to: DFNGGAHFNATEVVATVEYTQRN*CQGPFY
Trigger: ATAGAAAGGGCCTTGACATCAGTTCCTTTGTGTGTA...TTCCACAGTTGCCACCACCTCTGTGGCATTGAAATGAGCACCTCCATTAAAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
3UTR-3UTR CCA 90 bp AGGAATCACAGCACACTGGGATTACGGAAGTTATGTCCGGCAAAGCGAGCTTCATCAATTCTCATGAGCTaGTTGTATTTAGCCAGACGT +
Preference number: 2 (lower is better)
Translates to: RNHSTLGLRKLCPAKRASSILMS*LYLARR
Trigger: ACGTCTGGCTAAATACAACCAGCTCATGAGAATTGA...TGAAGCTCGCTTTGCCGGACATAACTTCCGTAATCCCAGTGTGCTGTGATTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535275.5
3UTR-3UTR TCA 90 bp ACGCTCCCATCACAGATGCTGATCATTCTTCCACGGACCCCCTTTTATAATAATCACATTTCTAGTTTCTaGGGGAAGAGAGAAAGAGAA +
Preference number: 2 (lower is better)
Translates to: TLPSQMLIILPRTPFYNNHISSF*GKRERE
Trigger: TTCTCTTTCTCTCTTCCCTCAGAAACTAGAAATGTG...ATTATTATAAAAGGGGGTCCGTGGAAGAATGATCAGCATCTGTGATGGGAGCGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000538763.5
ENST00000541477.5
ENST00000545045.6
3UTR CCA 72 bp ATGCCACAGAGGTGGTGGCAACTGTGGAACGTGGCATaGGGAGTGAGAGGTTGCTCTGGTGCAGCTGGAGGA +
Preference number: 3 (lower is better)
Translates to: MPQRWWQLWNVA*GVRGCSGAAGG
Trigger: TCCTCCAGCTGCACCAGAGCAACCTCTCACTCCCCATGCCACGTTCCACAGTTGCCACCACCTCTGTGGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
3UTR-3UTR CAA 90 bp CAGCACACTGGGATTACGGAAGTTATGTCCGGCAAAGCGAGCTTCATCCCCCAGGGCCAGCTTGCACGCTaGGATGGCTTCAGTGACCGA +
Preference number: 3 (lower is better)
Translates to: QHTGITEVMSGKASFIPQGQLAR*DGFSDR
Trigger: TCGGTCACTGAAGCCATCCAAGCGTGCAAGCTGGCC...CTGGGGGATGAAGCTCGCTTTGCCGGACATAACTTCCGTAATCCCAGTGTGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535275.5
3UTR-3UTR CAA 90 bp CACTGGGATTACGGAAGTTATGTCCGGCAAAGCGAGCTTCATCCCCCAGCTCTTCACGGGGCACCAGTCTaGATCTGGCCTGTGCACAGC +
Preference number: 3 (lower is better)
Translates to: HWDYGSYVRQSELHPPALHGAPV*IWPVHS
Trigger: GCTGTGCACAGGCCAGATCAAGACTGGTGCCCCGTG...AAGAGCTGGGGGATGAAGCTCGCTTTGCCGGACATAACTTCCGTAATCCCAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535275.5
3UTR TCA 72 bp AGAGGTGGTGGCAACTGTGGAACGTGGCATGGGGAGTaGGAGGTTGCTCTGGTGCAGCTGGAGGAAGAACAG +
Preference number: 3 (lower is better)
Translates to: RGGGNCGTWHGE*EVALVQLEEEQ
Trigger: CTGTTCTTCCTCCAGCTGCACCAGAGCAACCTCTCACTCCCCATGCCACGTTCCACAGTTGCCACCACCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
3UTR GCA 72 bp TGGCAACTGTGGAACGTGGCATGGGGAGTGAGAGGTTaGTCTGGTGCAGCTGGAGGAAGAACAGGGAACCTA +
Preference number: 3 (lower is better)
Translates to: WQLWNVAWGVRG*SGAAGGRTGNL
Trigger: TAGGTTCCCTGTTCTTCCTCCAGCTGCACCAGAGCAACCTCTCACTCCCCATGCCACGTTCCACAGTTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
3UTR CCA 72 bp ACTGTGGAACGTGGCATGGGGAGTGAGAGGTTGCTCTaGTGCAGCTGGAGGAAGAACAGGGAACCTAGGGTT +
Preference number: 3 (lower is better)
Translates to: TVERGMGSERLL*CSWRKNREPRV
Trigger: AACCCTAGGTTCCCTGTTCTTCCTCCAGCTGCACCAGAGCAACCTCTCACTCCCCATGCCACGTTCCACAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
3UTR CCA 72 bp GTGCTCATTTCAATGCCACAGAGGTGGTGGCAACTGTaGAACGTGGCATGGGGAGTGAGAGGTTGCTCTGGT +
Preference number: 3 (lower is better)
Translates to: VLISMPQRWWQL*NVAWGVRGCSG
Trigger: ACCAGAGCAACCTCTCACTCCCCATGCCACGTTCCACAGTTGCCACCACCTCTGTGGCATTGAAATGAGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
3UTR TCA 72 bp CCTCCCACCCCAGTCATCTTGGGATCTACAGCCACATaGAATACAGACACATCGTTCCCCCAAGTCAGGCCA +
Preference number: 3 (lower is better)
Translates to: PPTPVILGSTAT*NTDTSFPQVRP
Trigger: TGGCCTGACTTGGGGGAACGATGTGTCTGTATTTCATGTGGCTGTAGATCCCAAGATGACTGGGGTGGGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
3UTR TCA 72 bp CACACAGCCTCCGCTCTGGACCAACGCAGGCTTCAGTaGGTACACACAAAGGAACTGATGTCAAGGCCCTTT +
Preference number: 3 (lower is better)
Translates to: HTASALDQRRLQ*VHTKELMSRPF
Trigger: AAAGGGCCTTGACATCAGTTCCTTTGTGTGTACTCACTGAAGCCTGCGTTGGTCCAGAGCGGAGGCTGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
3UTR-3UTR CAA 90 bp AGAGGAAAACTCCCCCAGGCACACAGCCTCCGCTCTGGACCAACGCAGGCTTCAGCCAGTTTTAGGCCATaGAGTTATGGGGAAATGATT +
Preference number: 3 (lower is better)
Translates to: RGKLPQAHSLRSGPTQASASFRP*SYGEMI
Trigger: AATCATTTCCCCATAACTCAATGGCCTAAAACTGGC...TGAAGCCTGCGTTGGTCCAGAGCGGAGGCTGTGTGCCTGGGGGAGTTTTCCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
3UTR-3UTR CAA 90 bp CACTGGGATTACGGAAGTTATGTCCGGCAAAGCGAGCTTCATCCCCCAGCTCTTCCCGCTCAATACGTTTaGGGTTGGTCACTGTCAGGT +
Preference number: 3 (lower is better)
Translates to: HWDYGSYVRQSELHPPALPAQYV*GWSLSG
Trigger: ACCTGACAGTGACCAACCCAAAACGTATTGAGCGGG...AAGAGCTGGGGGATGAAGCTCGCTTTGCCGGACATAACTTCCGTAATCCCAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535275.5
3UTR GCA 72 bp ATCACATGCCCAACACTCCCCTCCATCCCAGCACTATaGACAGTTCACGGCTCATATGCAAAGTGGAAGACA +
Preference number: 3 (lower is better)
Translates to: ITCPTLPSIPAL*TVHGSYAKWKT
Trigger: TGTCTTCCACTTTGCATATGAGCCGTGAACTGTGCATAGTGCTGGGATGGAGGGGAGTGTTGGGCATGTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
3UTR-3UTR CAA 90 bp CCTTTCTATGACCCTTCCCATTCTAGCAAGACCTCCCACCCCAGTCATCTTGGGGCCAGTTTTAGGCCATaGAGTTATGGGGAAATGATT +
Preference number: 3 (lower is better)
Translates to: PFYDPSHSSKTSHPSHLGASFRP*SYGEMI
Trigger: AATCATTTCCCCATAACTCAATGGCCTAAAACTGGC...CCCAAGATGACTGGGGTGGGAGGTCTTGCTAGAATGGGAAGGGTCATAGAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR TCA 90 bp ACCCCAATGAGTAGGGCACAGAAAGGAGGGCGAGCAGAGACAGCAAGAGGTCAGCCGCGCGGGCGCATGTaGCCCGGAGCCCCCGATGAG +
Preference number: 4 (lower is better)
Translates to: TPMSRAQKGGRAETARGQPRGRM*PGAPDE
Trigger: CTCATCGGGGGCTCCGGGTCACATGCGCCCGCGCGG...CTGACCTCTTGCTGTCTCTGCTCGCCCTCCTTTCTGTGCCCTACTCATTGGGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000541477.5
CDS-3UTR TCA 90 bp GCCTTATTAGCCAGGCGTGATCACATGCCCAACACTCCCCTCCATCCCAGCACTACCCGGAGCCCCCGATaGGTCAGGAGCTGCCGGCGG +
Preference number: 4 (lower is better)
Translates to: ALLARRDHMPNTPLHPSTTRSPR*VRSCRR
Trigger: CCGCCGGCAGCTCCTGACTCATCGGGGGCTCCGGGT...AGTGCTGGGATGGAGGGGAGTGTTGGGCATGTGATCACGCCTGGCTAATAAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000541477.5
CDS-3UTR GCA 90 bp GGAGCAGCGGAGCAGGTCAATCAGGGAAGTTCTGGGCACCCTGGGGCTCAGGGGTGGGGAGTGAGAGGTTaGTCTGGTGCAGCTGGAGGA +
Preference number: 4 (lower is better)
Translates to: GAAEQVNQGSSGHPGAQGWGVRG*SGAAGG
Trigger: TCCTCCAGCTGCACCAGAGCAACCTCTCACTCCCCA...CCCCTGAGCCCCAGGGTGCCCAGAACTTCCCTGATTGACCTGCTCCGCTGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR CCA 90 bp GGAGCAGCGGAGCAGGTCAATCAGGGAAGTTCTGGGCACCCTGGGGCTCAGGGGACACAGCCTCCGCTCTaGACCAACGCAGGCTTCAGT +
Preference number: 4 (lower is better)
Translates to: GAAEQVNQGSSGHPGAQGTQPPL*TNAGFS
Trigger: ACTGAAGCCTGCGTTGGTCCAGAGCGGAGGCTGTGT...CCCCTGAGCCCCAGGGTGCCCAGAACTTCCCTGATTGACCTGCTCCGCTGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR CCA 90 bp GCCTTATTAGCCAGGCGTGATCACATGCCCAACACTCCCCTCCATCCCAGCACTGGGGCACCCACGACCTaGCCCCAGCGCACACAAGCG +
Preference number: 4 (lower is better)
Translates to: ALLARRDHMPNTPLHPSTGAPTT*PQRTQA
Trigger: CGCTTGTGTGCGCTGGGGCCAGGTCGTGGGTGCCCC...AGTGCTGGGATGGAGGGGAGTGTTGGGCATGTGATCACGCCTGGCTAATAAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000541477.5
CDS-3UTR TCA 90 bp GGAGCAGCGGAGCAGGTCAATCAGGGAAGTTCTGGGCACCCTGGGGCTCAGGGGGTCCTCAGTCTCTCCTaGGCGATGACTCACCATGAC +
Preference number: 4 (lower is better)
Translates to: GAAEQVNQGSSGHPGAQGVLSLS*AMTHHD
Trigger: GTCATGGTGAGTCATCGCTCAGGAGAGACTGAGGAC...CCCCTGAGCCCCAGGGTGCCCAGAACTTCCCTGATTGACCTGCTCCGCTGCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000538763.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR TCA 90 bp CAAGGTTCCAGGAGGATGAGACAGAGGTTCCACGTCTCCAGGCAAGCAGAGGAATGGCGACGGCGGCGCTaGGAGAGCGGGAGTGGCAGT +
Preference number: 4 (lower is better)
Translates to: QGSRRMRQRFHVSRQAEEWRRRR*ESGSGS
Trigger: ACTGCCACTCCCGCTCTCTCAGCGCCGCCGTCGCCA...TTCCTCTGCTTGCCTGGAGACGTGGAACCTCTGTCTCATCCTCCTGGAACCTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541477.5
CDS-3UTR GCA 90 bp AAAGGAGGGCGAGCAGAGACAGCAAGAGGTCAGGTAAGCCAAGGAGCAGCGGAGGTTCCCGCGCCTCTTTaGAGCTTGGCCAGCCGGTGG +
Preference number: 4 (lower is better)
Translates to: KGGRAETARGQVSQGAAEVPAPL*SLASRW
Trigger: CCACCGGCTGGCCAAGCTGCAAAGAGGCGCGGGAAC...CTCCGCTGCTCCTTGGCTTACCTGACCTCTTGCTGTCTCTGCTCGCCCTCCTTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535366.5
CDS-3UTR CCA 90 bp ACAGAAAGGAGGGCGAGCAGAGACAGCAAGAGGTCAGGTAAGCCAAGGAGCAGCAGGATGGGGGAAGGGTaGGGGCACCCACGACCTGGC +
Preference number: 4 (lower is better)
Translates to: TERRASRDSKRSGKPRSSRMGEG*GHPRPG
Trigger: GCCAGGTCGTGGGTGCCCCCACCCTTCCCCCATCCT...GCTGCTCCTTGGCTTACCTGACCTCTTGCTGTCTCTGCTCGCCCTCCTTTCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000541477.5
CDS-3UTR TCA 90 bp CAAGGAGCAGCGGAGCAGGTCAATCAGGGAAGTTCTGGGCACCCTGGGGCTCAGCCAGCTGGTCCCCAGTaGTGTATCGGGAAGGATCAG +
Preference number: 4 (lower is better)
Translates to: QGAAEQVNQGSSGHPGAQPAGPQ*CIGKDQ
Trigger: CTGATCCTTCCCGATACATCACTGGGGACCAGCTGG...CTGAGCCCCAGGGTGCCCAGAACTTCCCTGATTGACCTGCTCCGCTGCTCCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000538763.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR TCA 90 bp GGAGCAGCGGAGCAGGTCAATCAGGGAAGTTCTGGGCACCCTGGGGCTCAGGGGTCCCATCACAGATGCTaGTCATTCTTCCACGGACCC +
Preference number: 4 (lower is better)
Translates to: GAAEQVNQGSSGHPGAQGSHHRC*SFFHGP
Trigger: GGGTCCGTGGAAGAATGATCAGCATCTGTGATGGGA...CCCCTGAGCCCCAGGGTGCCCAGAACTTCCCTGATTGACCTGCTCCGCTGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000538763.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR CCA 90 bp GGAGCAGCGGAGCAGGTCAATCAGGGAAGTTCTGGGCACCCTGGGGCTCAGGGGTATGGACATGATGGCTaGGATCTCCTCGGGACTGCA +
Preference number: 4 (lower is better)
Translates to: GAAEQVNQGSSGHPGAQGYGHDG*DLLGTA
Trigger: TGCAGTCCCGAGGAGATCCCAGCCATCATGTCCATA...CCCCTGAGCCCCAGGGTGCCCAGAACTTCCCTGATTGACCTGCTCCGCTGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000538763.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR CCA 90 bp CCAGGCACACAGCCTCCGCTCTGGACCAACGCAGGCTTCAGTGAGTACACACAAGGAGGGGCACGACAGTaGTTCCCGCGCCTCTTTGCA +
Preference number: 4 (lower is better)
Translates to: PGTQPPLWTNAGFSEYTQGGARQ*FPRLFA
Trigger: TGCAAAGAGGCGCGGGAACCACTGTCGTGCCCCTCC...TTGTGTGTACTCACTGAAGCCTGCGTTGGTCCAGAGCGGAGGCTGTGTGCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535366.5
CDS-3UTR CCA 90 bp CTCATTTCAATGCCACAGAGGTGGTGGCAACTGTGGAACGTGGCATGGGGAGTGGGGGACCGACGAGGGTaGAGTGGGGAAGGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: LISMPQRWWQLWNVAWGVGDRRG*SGEGRR
Trigger: CCTCCTCCCTTCCCCACTCCACCCTCGTCGGTCCCC...CACTCCCCATGCCACGTTCCACAGTTGCCACCACCTCTGTGGCATTGAAATGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000541477.5
CDS-3UTR TCA 90 bp AGAGGAAAACTCCCCCAGGCACACAGCCTCCGCTCTGGACCAACGCAGGCTTCACCAGCTGGTCCCCAGTaGTGTATCGGGAAGGATCAG +
Preference number: 4 (lower is better)
Translates to: RGKLPQAHSLRSGPTQASPAGPQ*CIGKDQ
Trigger: CTGATCCTTCCCGATACATCACTGGGGACCAGCTGG...TGAAGCCTGCGTTGGTCCAGAGCGGAGGCTGTGTGCCTGGGGGAGTTTTCCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR GCA 90 bp AGAGGTCAGGTAAGCCAAGGAGCAGCGGAGCAGGTCAATCAGGGAAGTTCTGGGCAGTTCCCGCTCAGCTaGCCCTGCCTTACACACGGC +
Preference number: 4 (lower is better)
Translates to: RGQVSQGAAEQVNQGSSGQFPLS*PCLTHG
Trigger: GCCGTGTGTAAGGCAGGGGCAGCTGAGCGGGAACTG...CCCAGAACTTCCCTGATTGACCTGCTCCGCTGCTCCTTGGCTTACCTGACCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000538763.5
ENST00000541477.5
CDS-3UTR GCA 90 bp GGAGCAGCGGAGCAGGTCAATCAGGGAAGTTCTGGGCACCCTGGGGCTCAGGGGGGAAGAAGTGGAAAGTaGGGAACCCCAATGAGTAGG +
Preference number: 4 (lower is better)
Translates to: GAAEQVNQGSSGHPGAQGGRSGK*GTPMSR
Trigger: CCTACTCATTGGGGTTCCGCACTTTCCACTTCTTCC...CCCCTGAGCCCCAGGGTGCCCAGAACTTCCCTGATTGACCTGCTCCGCTGCTCC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000538763.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR CCA 90 bp GGAGCAGCGGAGCAGGTCAATCAGGGAAGTTCTGGGCACCCTGGGGCTCAGGGGATGGTGGAGTTGATGTaGTCCACTGCCTTCAGGACA +
Preference number: 4 (lower is better)
Translates to: GAAEQVNQGSSGHPGAQGMVELM*STAFRT
Trigger: TGTCCTGAAGGCAGTGGACCACATCAACTCCACCAT...CCCCTGAGCCCCAGGGTGCCCAGAACTTCCCTGATTGACCTGCTCCGCTGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR CCA 90 bp GGAGCAGCGGAGCAGGTCAATCAGGGAAGTTCTGGGCACCCTGGGGCTCAGGGGCCGCTCAATACGTTTTaGGTTGGTCACTGTCAGGTC +
Preference number: 4 (lower is better)
Translates to: GAAEQVNQGSSGHPGAQGPLNTF*VGHCQV
Trigger: GACCTGACAGTGACCAACCCAAAACGTATTGAGCGG...CCCCTGAGCCCCAGGGTGCCCAGAACTTCCCTGATTGACCTGCTCCGCTGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000538763.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR CCA 90 bp CAAGGAGCAGCGGAGCAGGTCAATCAGGGAAGTTCTGGGCACCCTGGGGCTCAGCTGTGGAACGTGGCATaGGGAGTGAGAGGTTGCTCT +
Preference number: 4 (lower is better)
Translates to: QGAAEQVNQGSSGHPGAQLWNVA*GVRGCS
Trigger: AGAGCAACCTCTCACTCCCCATGCCACGTTCCACAG...CTGAGCCCCAGGGTGCCCAGAACTTCCCTGATTGACCTGCTCCGCTGCTCCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR CCA 90 bp CGAGCAGAGACAGCAAGAGGTCAGGTAAGCCAAGGAGCAGCGGAGCAGGTCAATAGCTTGGCCAGCCGGTaGGGTTCCCCCAGATCTCCT +
Preference number: 4 (lower is better)
Translates to: RAETARGQVSQGAAEQVNSLASR*GSPRSP
Trigger: AGGAGATCTGGGGGAACCCCACCGGCTGGCCAAGCT...ATTGACCTGCTCCGCTGCTCCTTGGCTTACCTGACCTCTTGCTGTCTCTGCTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535366.5
CDS-3UTR CCA 90 bp GCCTTATTAGCCAGGCGTGATCACATGCCCAACACTCCCCTCCATCCCAGCACTAGAGGATGGGCTGCCTaGGCCTCTCTTCCAGAGCCC +
Preference number: 4 (lower is better)
Translates to: ALLARRDHMPNTPLHPSTRGWAA*ASLPEP
Trigger: GGGCTCTGGAAGAGAGGCCCAGGCAGCCCATCCTCT...AGTGCTGGGATGGAGGGGAGTGTTGGGCATGTGATCACGCCTGGCTAATAAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535366.5
CDS-3UTR GCA 90 bp GCACAAGTGACACATGGTCCCTCTCTAACACCTCAGCACACCAACCCTGACGCTCAGTTCCCGCTCAGCTaGCCCTGCCTTACACACGGC +
Preference number: 4 (lower is better)
Translates to: AQVTHGPSLTPQHTNPDAQFPLS*PCLTHG
Trigger: GCCGTGTGTAAGGCAGGGGCAGCTGAGCGGGAACTG...AGCGTCAGGGTTGGTGTGCTGAGGTGTTAGAGAGGGACCATGTGTCACTTGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000538763.5
ENST00000541477.5
CDS-3UTR GCA 90 bp ATAGAGGAAAACTCCCCCAGGCACACAGCCTCCGCTCTGGACCAACGCAGGCTTAAAGTCCTGGTAGAGTaGCCCCAGCTGGTCCCCAGT +
Preference number: 4 (lower is better)
Translates to: IEENSPRHTASALDQRRLKVLVE*PQLVPS
Trigger: ACTGGGGACCAGCTGGGGGCACTCTACCAGGACTTT...AAGCCTGCGTTGGTCCAGAGCGGAGGCTGTGTGCCTGGGGGAGTTTTCCTCTAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR GCA 90 bp AAAGGAGGGCGAGCAGAGACAGCAAGAGGTCAGGTAAGCCAAGGAGCAGCGGAGCCAGGCGTGATCACATaGCCAACACTCCCCTCCATC +
Preference number: 4 (lower is better)
Translates to: KGGRAETARGQVSQGAAEPGVIT*PTLPSI
Trigger: GATGGAGGGGAGTGTTGGGCATGTGATCACGCCTGG...CTCCGCTGCTCCTTGGCTTACCTGACCTCTTGCTGTCTCTGCTCGCCCTCCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR GCA 90 bp GAGGAAAACTCCCCCAGGCACACAGCCTCCGCTCTGGACCAACGCAGGCTTCAGTCAGAGCGGAATGGCTaGCAGGCTTGCATTTCTCCT +
Preference number: 4 (lower is better)
Translates to: EENSPRHTASALDQRRLQSERNG*QACISP
Trigger: AGGAGAAATGCAAGCCTGGCAGCCATTCCGCTCTGA...CTGAAGCCTGCGTTGGTCCAGAGCGGAGGCTGTGTGCCTGGGGGAGTTTTCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535366.5
CDS-3UTR CCA 90 bp GCCTTATTAGCCAGGCGTGATCACATGCCCAACACTCCCCTCCATCCCAGCACTAAGTTCTGGGCACCCTaGGGCTCAGGGGATCTCAGG +
Preference number: 4 (lower is better)
Translates to: ALLARRDHMPNTPLHPSTKFWAP*GSGDLR
Trigger: CCTGAGATCCCCTGAGCCCCAGGGTGCCCAGAACTT...AGTGCTGGGATGGAGGGGAGTGTTGGGCATGTGATCACGCCTGGCTAATAAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR CCA 90 bp GCCTTATTAGCCAGGCGTGATCACATGCCCAACACTCCCCTCCATCCCAGCACTCAATCAGGGAAGTTCTaGGCACCCTGGGGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: ALLARRDHMPNTPLHPSTQSGKF*APWGSG
Trigger: CCCTGAGCCCCAGGGTGCCCAGAACTTCCCTGATTG...AGTGCTGGGATGGAGGGGAGTGTTGGGCATGTGATCACGCCTGGCTAATAAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR CCA 90 bp GGAGCAGCGGAGCAGGTCAATCAGGGAAGTTCTGGGCACCCTGGGGCTCAGGGGGGCTCATATGCAAAGTaGAAGACACGTGGGACAAGA +
Preference number: 4 (lower is better)
Translates to: GAAEQVNQGSSGHPGAQGGSYAK*KTRGTR
Trigger: TCTTGTCCCACGTGTCTTCCACTTTGCATATGAGCC...CCCCTGAGCCCCAGGGTGCCCAGAACTTCCCTGATTGACCTGCTCCGCTGCTCC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR CCA 90 bp CAAGGAGCAGCGGAGCAGGTCAATCAGGGAAGTTCTGGGCACCCTGGGGCTCAGTTGCTCTGGTGCAGCTaGAGGAAGAACAGGGAACCT +
Preference number: 4 (lower is better)
Translates to: QGAAEQVNQGSSGHPGAQLLWCS*RKNREP
Trigger: AGGTTCCCTGTTCTTCCTCCAGCTGCACCAGAGCAA...CTGAGCCCCAGGGTGCCCAGAACTTCCCTGATTGACCTGCTCCGCTGCTCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR CCA 90 bp CAAGGAGCAGCGGAGCAGGTCAATCAGGGAAGTTCTGGGCACCCTGGGGCTCAGTATGGACATGATGGCTaGGATCTCCTCGGGACTGCA +
Preference number: 4 (lower is better)
Translates to: QGAAEQVNQGSSGHPGAQYGHDG*DLLGTA
Trigger: TGCAGTCCCGAGGAGATCCCAGCCATCATGTCCATA...CTGAGCCCCAGGGTGCCCAGAACTTCCCTGATTGACCTGCTCCGCTGCTCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000538763.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR CCA 90 bp CCAGGCACACAGCCTCCGCTCTGGACCAACGCAGGCTTCAGTGAGTACACACAAGAGCCAAGAAGAGGATaGGCTGCCTGGGCCTCTCTT +
Preference number: 4 (lower is better)
Translates to: PGTQPPLWTNAGFSEYTQEPRRG*AAWASL
Trigger: AAGAGAGGCCCAGGCAGCCCATCCTCTTCTTGGCTC...TTGTGTGTACTCACTGAAGCCTGCGTTGGTCCAGAGCGGAGGCTGTGTGCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535366.5
CDS-3UTR TCA 90 bp CGAGCAGAGACAGCAAGAGGTCAGGTAAGCCAAGGAGCAGCGGAGCAGGTCAATCCAGCTGGTCCCCAGTaGTGTATCGGGAAGGATCAG +
Preference number: 4 (lower is better)
Translates to: RAETARGQVSQGAAEQVNPAGPQ*CIGKDQ
Trigger: CTGATCCTTCCCGATACATCACTGGGGACCAGCTGG...ATTGACCTGCTCCGCTGCTCCTTGGCTTACCTGACCTCTTGCTGTCTCTGCTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000538763.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR TCA 90 bp CCAGGCACACAGCCTCCGCTCTGGACCAACGCAGGCTTCAGTGAGTACACACAAGGGGATCTCAGGGGGTaGACTATCACAGATCAGGAC +
Preference number: 4 (lower is better)
Translates to: PGTQPPLWTNAGFSEYTQGDLRG*TITDQD
Trigger: GTCCTGATCTGTGATAGTTCACCCCCTGAGATCCCC...TTGTGTGTACTCACTGAAGCCTGCGTTGGTCCAGAGCGGAGGCTGTGTGCCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR TCA 90 bp AAAGGAGGGCGAGCAGAGACAGCAAGAGGTCAGGTAAGCCAAGGAGCAGCGGAGGGGGATCTCAGGGGGTaGACTATCACAGATCAGGAC +
Preference number: 4 (lower is better)
Translates to: KGGRAETARGQVSQGAAEGDLRG*TITDQD
Trigger: GTCCTGATCTGTGATAGTTCACCCCCTGAGATCCCC...CTCCGCTGCTCCTTGGCTTACCTGACCTCTTGCTGTCTCTGCTCGCCCTCCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000538763.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR TCA 90 bp GAGGAAAACTCCCCCAGGCACACAGCCTCCGCTCTGGACCAACGCAGGCTTCAGCAACGCAGGCTTCAGTaGGTACACACAAAGGAACTG +
Preference number: 4 (lower is better)
Translates to: EENSPRHTASALDQRRLQQRRLQ*VHTKEL
Trigger: CAGTTCCTTTGTGTGTACTCACTGAAGCCTGCGTTG...CTGAAGCCTGCGTTGGTCCAGAGCGGAGGCTGTGTGCCTGGGGGAGTTTTCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR TCA 90 bp GCTCAGGGGATCTCAGGGGGTGAACTATCACAGATCAGGACAGCAAGGTTCCAGACGTGGCATGGGGAGTaGGAGGTTGCTCTGGTGCAG +
Preference number: 4 (lower is better)
Translates to: AQGISGGELSQIRTARFQTWHGE*EVALVQ
Trigger: CTGCACCAGAGCAACCTCTCACTCCCCATGCCACGT...CTGGAACCTTGCTGTCCTGATCTGTGATAGTTCACCCCCTGAGATCCCCTGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR GCA 90 bp CGAGCAGAGACAGCAAGAGGTCAGGTAAGCCAAGGAGCAGCGGAGCAGGTCAATGGCTCCACTGGGCACTaGAGCCCGGAAAAGACCTTT +
Preference number: 4 (lower is better)
Translates to: RAETARGQVSQGAAEQVNGSTGH*SPEKTF
Trigger: AAAGGTCTTTTCCGGGCTGCAGTGCCCAGTGGAGCC...ATTGACCTGCTCCGCTGCTCCTTGGCTTACCTGACCTCTTGCTGTCTCTGCTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000538763.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR GCA 90 bp ATGGGGAGTGAGAGGTTGCTCTGGTGCAGCTGGAGGAAGAACAGGGAACCTAGGGGCTCCACTGGGCACTaGAGCCCGGAAAAGACCTTT +
Preference number: 4 (lower is better)
Translates to: MGSERLLWCSWRKNREPRGSTGH*SPEKTF
Trigger: AAAGGTCTTTTCCGGGCTGCAGTGCCCAGTGGAGCC...CCTAGGTTCCCTGTTCTTCCTCCAGCTGCACCAGAGCAACCTCTCACTCCCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR GCA 90 bp ACCCCAATGAGTAGGGCACAGAAAGGAGGGCGAGCAGAGACAGCAAGAGGTCAGGGCTCCACTGGGCACTaGAGCCCGGAAAAGACCTTT +
Preference number: 4 (lower is better)
Translates to: TPMSRAQKGGRAETARGQGSTGH*SPEKTF
Trigger: AAAGGTCTTTTCCGGGCTGCAGTGCCCAGTGGAGCC...CTGACCTCTTGCTGTCTCTGCTCGCCCTCCTTTCTGTGCCCTACTCATTGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000538763.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR GCA 90 bp CCTTTCTATGACCCTTCCCATTCTAGCAAGACCTCCCACCCCAGTCATCTTGGGCAGTTCCCGCTCAGCTaGCCCTGCCTTACACACGGC +
Preference number: 4 (lower is better)
Translates to: PFYDPSHSSKTSHPSHLGQFPLS*PCLTHG
Trigger: GCCGTGTGTAAGGCAGGGGCAGCTGAGCGGGAACTG...CCCAAGATGACTGGGGTGGGAGGTCTTGCTAGAATGGGAAGGGTCATAGAAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
CDS-3UTR GCA 90 bp ACCCCAATGAGTAGGGCACAGAAAGGAGGGCGAGCAGAGACAGCAAGAGGTCAGAAAGTCCTGGTAGAGTaGCCCCAGCTGGTCCCCAGT +
Preference number: 4 (lower is better)
Translates to: TPMSRAQKGGRAETARGQKVLVE*PQLVPS
Trigger: ACTGGGGACCAGCTGGGGGCACTCTACCAGGACTTT...CTGACCTCTTGCTGTCTCTGCTCGCCCTCCTTTCTGTGCCCTACTCATTGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000538763.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR GCA 90 bp GAGGAAAACTCCCCCAGGCACACAGCCTCCGCTCTGGACCAACGCAGGCTTCAGGGCCTTTTCTTCCACTaGCCGCTCAATACGTTTTGG +
Preference number: 4 (lower is better)
Translates to: EENSPRHTASALDQRRLQGLFFH*PLNTFW
Trigger: CCAAAACGTATTGAGCGGGCAGTGGAAGAAAAGGCC...CTGAAGCCTGCGTTGGTCCAGAGCGGAGGCTGTGTGCCTGGGGGAGTTTTCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR GCA 90 bp AAAGGAGGGCGAGCAGAGACAGCAAGAGGTCAGGTAAGCCAAGGAGCAGCGGAGGAGAGGTTGCTCTGGTaGAGCTGGAGGAAGAACAGG +
Preference number: 4 (lower is better)
Translates to: KGGRAETARGQVSQGAAEERLLW*SWRKNR
Trigger: CCTGTTCTTCCTCCAGCTGCACCAGAGCAACCTCTC...CTCCGCTGCTCCTTGGCTTACCTGACCTCTTGCTGTCTCTGCTCGCCCTCCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR GCA 90 bp CCAGGCACACAGCCTCCGCTCTGGACCAACGCAGGCTTCAGTGAGTACACACAAGAGAGGTTGCTCTGGTaGAGCTGGAGGAAGAACAGG +
Preference number: 4 (lower is better)
Translates to: PGTQPPLWTNAGFSEYTQERLLW*SWRKNR
Trigger: CCTGTTCTTCCTCCAGCTGCACCAGAGCAACCTCTC...TTGTGTGTACTCACTGAAGCCTGCGTTGGTCCAGAGCGGAGGCTGTGTGCCTGG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR GCA 90 bp GAGGAAAACTCCCCCAGGCACACAGCCTCCGCTCTGGACCAACGCAGGCTTCAGAGGTGCTCATTTCAATaGCACAGAGGTGGTGGCAAC +
Preference number: 4 (lower is better)
Translates to: EENSPRHTASALDQRRLQRCSFQ*HRGGGN
Trigger: GTTGCCACCACCTCTGTGGCATTGAAATGAGCACCT...CTGAAGCCTGCGTTGGTCCAGAGCGGAGGCTGTGTGCCTGGGGGAGTTTTCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR CCA 90 bp GTGGCATGGGGAGTGAGAGGTTGCTCTGGTGCAGCTGGAGGAAGAACAGGGAACCTGCACCTAGTCGCATaGCATCCCGAAAGCTCTCAG +
Preference number: 4 (lower is better)
Translates to: VAWGVRGCSGAAGGRTGNLHLVA*HPESSQ
Trigger: CTGAGAGCTTTCGGGATGCCATGCGACTAGGTGCAG...GTTCCCTGTTCTTCCTCCAGCTGCACCAGAGCAACCTCTCACTCCCCATGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
CDS-3UTR CCA 90 bp CGAGCAGAGACAGCAAGAGGTCAGGTAAGCCAAGGAGCAGCGGAGCAGGTCAATGCCAGCTTGCACGCTTaGATGGCTTCAGTGACCGAG +
Preference number: 4 (lower is better)
Translates to: RAETARGQVSQGAAEQVNASLHA*MASVTE
Trigger: CTCGGTCACTGAAGCCATCCAAGCGTGCAAGCTGGC...ATTGACCTGCTCCGCTGCTCCTTGGCTTACCTGACCTCTTGCTGTCTCTGCTCG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000538763.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR CCA 90 bp GTGCTCATTTCAATGCCACAGAGGTGGTGGCAACTGTGGAACGTGGCATGGGGAAAGTTCTGGGCACCCTaGGGCTCAGGGGATCTCAGG +
Preference number: 4 (lower is better)
Translates to: VLISMPQRWWQLWNVAWGKFWAP*GSGDLR
Trigger: CCTGAGATCCCCTGAGCCCCAGGGTGCCCAGAACTT...TCCCCATGCCACGTTCCACAGTTGCCACCACCTCTGTGGCATTGAAATGAGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR CCA 90 bp GAGGTGCTCATTTCAATGCCACAGAGGTGGTGGCAACTGTGGAACGTGGCATGGCAATCAGGGAAGTTCTaGGCACCCTGGGGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: EVLISMPQRWWQLWNVAWQSGKF*APWGSG
Trigger: CCCTGAGCCCCAGGGTGCCCAGAACTTCCCTGATTG...CCATGCCACGTTCCACAGTTGCCACCACCTCTGTGGCATTGAAATGAGCACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR CCA 90 bp GAGGAAAACTCCCCCAGGCACACAGCCTCCGCTCTGGACCAACGCAGGCTTCAGCCACCCCAGTCATCTTaGGATCTACAGCCACATGAA +
Preference number: 4 (lower is better)
Translates to: EENSPRHTASALDQRRLQPPQSS*DLQPHE
Trigger: TTCATGTGGCTGTAGATCCCAAGATGACTGGGGTGG...CTGAAGCCTGCGTTGGTCCAGAGCGGAGGCTGTGTGCCTGGGGGAGTTTTCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR CCA 90 bp GCCTTATTAGCCAGGCGTGATCACATGCCCAACACTCCCCTCCATCCCAGCACTACACAGCCTCCGCTCTaGACCAACGCAGGCTTCAGT +
Preference number: 4 (lower is better)
Translates to: ALLARRDHMPNTPLHPSTTQPPL*TNAGFS
Trigger: ACTGAAGCCTGCGTTGGTCCAGAGCGGAGGCTGTGT...AGTGCTGGGATGGAGGGGAGTGTTGGGCATGTGATCACGCCTGGCTAATAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR CCA 90 bp AGAGGTCAGGTAAGCCAAGGAGCAGCGGAGCAGGTCAATCAGGGAAGTTCTGGGAGGTGGTGGCAACTGTaGAACGTGGCATGGGGAGTG +
Preference number: 4 (lower is better)
Translates to: RGQVSQGAAEQVNQGSSGRWWQL*NVAWGV
Trigger: CACTCCCCATGCCACGTTCCACAGTTGCCACCACCT...CCCAGAACTTCCCTGATTGACCTGCTCCGCTGCTCCTTGGCTTACCTGACCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR CCA 90 bp GTGACACATGGTCCCTCTCTAACACCTCAGCACACCAACCCTGACGCTCCCATCAGGTGGTGGCAACTGTaGAACGTGGCATGGGGAGTG +
Preference number: 4 (lower is better)
Translates to: VTHGPSLTPQHTNPDAPIRWWQL*NVAWGV
Trigger: CACTCCCCATGCCACGTTCCACAGTTGCCACCACCT...GATGGGAGCGTCAGGGTTGGTGTGCTGAGGTGTTAGAGAGGGACCATGTGTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR CCA 90 bp TGGAACGTGGCATGGGGAGTGAGAGGTTGCTCTGGTGCAGCTGGAGGAAGAACAAGGTGGTGGCAACTGTaGAACGTGGCATGGGGAGTG +
Preference number: 4 (lower is better)
Translates to: WNVAWGVRGCSGAAGGRTRWWQL*NVAWGV
Trigger: CACTCCCCATGCCACGTTCCACAGTTGCCACCACCT...TGTTCTTCCTCCAGCTGCACCAGAGCAACCTCTCACTCCCCATGCCACGTTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR CCA 90 bp CTCATTTCAATGCCACAGAGGTGGTGGCAACTGTGGAACGTGGCATGGGGAGTGTGGGTAGGGAGGCGCTaGCTGCAGTCTAGGGCTGTA +
Preference number: 4 (lower is better)
Translates to: LISMPQRWWQLWNVAWGVWVGRR*LQSRAV
Trigger: TACAGCCCTAGACTGCAGCCAGCGCCTCCCTACCCA...CACTCCCCATGCCACGTTCCACAGTTGCCACCACCTCTGTGGCATTGAAATGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535366.5
CDS-3UTR CCA 90 bp GTGGCATGGGGAGTGAGAGGTTGCTCTGGTGCAGCTGGAGGAAGAACAGGGAACAGAGGCTTAGAGGGGTaGAGCCTGAGATCAATGGGC +
Preference number: 4 (lower is better)
Translates to: VAWGVRGCSGAAGGRTGNRGLEG*SLRSMG
Trigger: GCCCATTGATCTCAGGCTCCACCCCTCTAAGCCTCT...GTTCCCTGTTCTTCCTCCAGCTGCACCAGAGCAACCTCTCACTCCCCATGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535366.5
3UTR CAA 72 bp GTGGCAACTGTGGAACGTGGCATGGGGAGTGAGAGGTaGCTCTGGTGCAGCTGGAGGAAGAACAGGGAACCT +
Preference number: 4 (lower is better)
Translates to: VATVERGMGSER*LWCSWRKNREP
Trigger: AGGTTCCCTGTTCTTCCTCCAGCTGCACCAGAGCAACCTCTCACTCCCCATGCCACGTTCCACAGTTGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR TCA 90 bp GCTCAGGGGATCTCAGGGGGTGAACTATCACAGATCAGGACAGCAAGGTTCCAGGCGCGATGGTGGAGTTaGTGTGGTCCACTGCCTTCA +
Preference number: 4 (lower is better)
Translates to: AQGISGGELSQIRTARFQARWWS*CGPLPS
Trigger: TGAAGGCAGTGGACCACATCAACTCCACCATCGCGC...CTGGAACCTTGCTGTCCTGATCTGTGATAGTTCACCCCCTGAGATCCCCTGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR TCA 90 bp GCACAAGTGACACATGGTCCCTCTCTAACACCTCAGCACACCAACCCTGACGCTCCAGCTGGTCCCCAGTaGTGTATCGGGAAGGATCAG +
Preference number: 4 (lower is better)
Translates to: AQVTHGPSLTPQHTNPDAPAGPQ*CIGKDQ
Trigger: CTGATCCTTCCCGATACATCACTGGGGACCAGCTGG...AGCGTCAGGGTTGGTGTGCTGAGGTGTTAGAGAGGGACCATGTGTCACTTGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000538763.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR TCA 90 bp AGAGGTCAGGTAAGCCAAGGAGCAGCGGAGCAGGTCAATCAGGGAAGTTCTGGGGTCCTCAGTCTCTCCTaGGCGATGACTCACCATGAC +
Preference number: 4 (lower is better)
Translates to: RGQVSQGAAEQVNQGSSGVLSLS*AMTHHD
Trigger: GTCATGGTGAGTCATCGCTCAGGAGAGACTGAGGAC...CCCAGAACTTCCCTGATTGACCTGCTCCGCTGCTCCTTGGCTTACCTGACCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000538763.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR TCA 90 bp GTGACACATGGTCCCTCTCTAACACCTCAGCACACCAACCCTGACGCTCCCATCGGGGATCTCAGGGGGTaGACTATCACAGATCAGGAC +
Preference number: 4 (lower is better)
Translates to: VTHGPSLTPQHTNPDAPIGDLRG*TITDQD
Trigger: GTCCTGATCTGTGATAGTTCACCCCCTGAGATCCCC...GATGGGAGCGTCAGGGTTGGTGTGCTGAGGTGTTAGAGAGGGACCATGTGTCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000538763.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR TCA 90 bp AAAGGAGGGCGAGCAGAGACAGCAAGAGGTCAGGTAAGCCAAGGAGCAGCGGAGTCCCATCACAGATGCTaGTCATTCTTCCACGGACCC +
Preference number: 4 (lower is better)
Translates to: KGGRAETARGQVSQGAAESHHRC*SFFHGP
Trigger: GGGTCCGTGGAAGAATGATCAGCATCTGTGATGGGA...CTCCGCTGCTCCTTGGCTTACCTGACCTCTTGCTGTCTCTGCTCGCCCTCCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000538763.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR TCA 90 bp CCAACCCTGACGCTCCCATCACAGATGCTGATCATTCTTCCACGGACCCCCTTTTCAGCACACCAACCCTaGCGCTCCCATCACAGATGC +
Preference number: 4 (lower is better)
Translates to: PTLTLPSQMLIILPRTPFSAHQP*RSHHRC
Trigger: GCATCTGTGATGGGAGCGTCAGGGTTGGTGTGCTGA...AAAGGGGGTCCGTGGAAGAATGATCAGCATCTGTGATGGGAGCGTCAGGGTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000538763.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR TCA 90 bp CCTTTCTATGACCCTTCCCATTCTAGCAAGACCTCCCACCCCAGTCATCTTGGGACGTGGCATGGGGAGTaGGAGGTTGCTCTGGTGCAG +
Preference number: 4 (lower is better)
Translates to: PFYDPSHSSKTSHPSHLGTWHGE*EVALVQ
Trigger: CTGCACCAGAGCAACCTCTCACTCCCCATGCCACGT...CCCAAGATGACTGGGGTGGGAGGTCTTGCTAGAATGGGAAGGGTCATAGAAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR TCA 90 bp GCCTTATTAGCCAGGCGTGATCACATGCCCAACACTCCCCTCCATCCCAGCACTAGAAGGTCAATGCAGTaGGGAAGGGGAGGTCACTGC +
Preference number: 4 (lower is better)
Translates to: ALLARRDHMPNTPLHPSTRRSMQ*GRGGHC
Trigger: GCAGTGACCTCCCCTTCCTCACTGCATTGACCTTCT...AGTGCTGGGATGGAGGGGAGTGTTGGGCATGTGATCACGCCTGGCTAATAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535366.5
CDS-3UTR GCA 90 bp CAAGGTTCCAGGAGGATGAGACAGAGGTTCCACGTCTCCAGGCAAGCAGAGGAAAAAGTCCTGGTAGAGTaGCCCCAGCTGGTCCCCAGT +
Preference number: 4 (lower is better)
Translates to: QGSRRMRQRFHVSRQAEEKVLVE*PQLVPS
Trigger: ACTGGGGACCAGCTGGGGGCACTCTACCAGGACTTT...TTCCTCTGCTTGCCTGGAGACGTGGAACCTCTGTCTCATCCTCCTGGAACCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000538763.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR GCA 90 bp GTGACACATGGTCCCTCTCTAACACCTCAGCACACCAACCCTGACGCTCCCATCGAGAGGTTGCTCTGGTaGAGCTGGAGGAAGAACAGG +
Preference number: 4 (lower is better)
Translates to: VTHGPSLTPQHTNPDAPIERLLW*SWRKNR
Trigger: CCTGTTCTTCCTCCAGCTGCACCAGAGCAACCTCTC...GATGGGAGCGTCAGGGTTGGTGTGCTGAGGTGTTAGAGAGGGACCATGTGTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR GCA 90 bp GTGCTCATTTCAATGCCACAGAGGTGGTGGCAACTGTGGAACGTGGCATGGGGATGGGGAGTGAGAGGTTaGTCTGGTGCAGCTGGAGGA +
Preference number: 4 (lower is better)
Translates to: VLISMPQRWWQLWNVAWGWGVRG*SGAAGG
Trigger: TCCTCCAGCTGCACCAGAGCAACCTCTCACTCCCCA...TCCCCATGCCACGTTCCACAGTTGCCACCACCTCTGTGGCATTGAAATGAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR GCA 90 bp GAGGTGCTCATTTCAATGCCACAGAGGTGGTGGCAACTGTGGAACGTGGCATGGTGGGGAGTGAGAGGTTaGTCTGGTGCAGCTGGAGGA +
Preference number: 4 (lower is better)
Translates to: EVLISMPQRWWQLWNVAWWGVRG*SGAAGG
Trigger: TCCTCCAGCTGCACCAGAGCAACCTCTCACTCCCCA...CCATGCCACGTTCCACAGTTGCCACCACCTCTGTGGCATTGAAATGAGCACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR CCA 90 bp CAAGGAGCAGCGGAGCAGGTCAATCAGGGAAGTTCTGGGCACCCTGGGGCTCAGGGCTCATATGCAAAGTaGAAGACACGTGGGACAAGA +
Preference number: 4 (lower is better)
Translates to: QGAAEQVNQGSSGHPGAQGSYAK*KTRGTR
Trigger: TCTTGTCCCACGTGTCTTCCACTTTGCATATGAGCC...CTGAGCCCCAGGGTGCCCAGAACTTCCCTGATTGACCTGCTCCGCTGCTCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR CCA 90 bp GCTCAGGGGATCTCAGGGGGTGAACTATCACAGATCAGGACAGCAAGGTTCCAGACACAGCCTCCGCTCTaGACCAACGCAGGCTTCAGT +
Preference number: 4 (lower is better)
Translates to: AQGISGGELSQIRTARFQTQPPL*TNAGFS
Trigger: ACTGAAGCCTGCGTTGGTCCAGAGCGGAGGCTGTGT...CTGGAACCTTGCTGTCCTGATCTGTGATAGTTCACCCCCTGAGATCCCCTGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR CCA 90 bp GCCTTATTAGCCAGGCGTGATCACATGCCCAACACTCCCCTCCATCCCAGCACTCTGTGGAACGTGGCATaGGGAGTGAGAGGTTGCTCT +
Preference number: 4 (lower is better)
Translates to: ALLARRDHMPNTPLHPSTLWNVA*GVRGCS
Trigger: AGAGCAACCTCTCACTCCCCATGCCACGTTCCACAG...AGTGCTGGGATGGAGGGGAGTGTTGGGCATGTGATCACGCCTGGCTAATAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR CCA 90 bp CCAGGCACACAGCCTCCGCTCTGGACCAACGCAGGCTTCAGTGAGTACACACAAGGCTTGCATTTCTCCTaGGAGCCAAGAAGAGGATGG +
Preference number: 4 (lower is better)
Translates to: PGTQPPLWTNAGFSEYTQGLHFS*EPRRGW
Trigger: CCATCCTCTTCTTGGCTCCCAGGAGAAATGCAAGCC...TTGTGTGTACTCACTGAAGCCTGCGTTGGTCCAGAGCGGAGGCTGTGTGCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535366.5
CDS-3UTR CCA 90 bp ACAGAAAGGAGGGCGAGCAGAGACAGCAAGAGGTCAGGTAAGCCAAGGAGCAGCCACCCAGGATGGCATTaGCCCCAAACTTGGCTTTGC +
Preference number: 4 (lower is better)
Translates to: TERRASRDSKRSGKPRSSHPGWH*PQTWLC
Trigger: GCAAAGCCAAGTTTGGGGCCAATGCCATCCTGGGTG...GCTGCTCCTTGGCTTACCTGACCTCTTGCTGTCTCTGCTCGCCCTCCTTTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538763.5
CDS-3UTR TCA 90 bp CTTGGGATCTACAGCCACATGAAATACAGACACATCGTTCCCCCAAGTCAGGCCGAGTTCCCGGCCAGCTaGGCAATGTGGCGATACAGG +
Preference number: 4 (lower is better)
Translates to: LGIYSHMKYRHIVPPSQAEFPAS*AMWRYR
Trigger: CCTGTATCGCCACATTGCTCAGCTGGCCGGGAACTC...GGCCTGACTTGGGGGAACGATGTGTCTGTATTTCATGTGGCTGTAGATCCCAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
CDS-3UTR TCA 90 bp AGAGGAAAACTCCCCCAGGCACACAGCCTCCGCTCTGGACCAACGCAGGCTTCAATCACGATAAAACTCTaGGGCAGCAACATCCATGCC +
Preference number: 4 (lower is better)
Translates to: RGKLPQAHSLRSGPTQASITIKL*GSNIHA
Trigger: GGCATGGATGTTGCTGCCTCAGAGTTTTATCGTGAT...TGAAGCCTGCGTTGGTCCAGAGCGGAGGCTGTGTGCCTGGGGGAGTTTTCCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR TCA 90 bp TGGGATTACGGAAGTTATGTCCGGCAAAGCGAGCTTCATCCCCCAGCTCTTCCTCCAGCTGGTCCCCAGTaGTGTATCGGGAAGGATCAG +
Preference number: 4 (lower is better)
Translates to: WDYGSYVRQSELHPPALPPAGPQ*CIGKDQ
Trigger: CTGATCCTTCCCGATACATCACTGGGGACCAGCTGG...AGGAAGAGCTGGGGGATGAAGCTCGCTTTGCCGGACATAACTTCCGTAATCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535275.5
CDS-3UTR TCA 90 bp CGAGCAGAGACAGCAAGAGGTCAGGTAAGCCAAGGAGCAGCGGAGCAGGTCAATCCACAGGATAGTCCCTaGCAAAGTCCTGGTAGAGTG +
Preference number: 4 (lower is better)
Translates to: RAETARGQVSQGAAEQVNPQDSP*QSPGRV
Trigger: CACTCTACCAGGACTTTGTCAGGGACTATCCTGTGG...ATTGACCTGCTCCGCTGCTCCTTGGCTTACCTGACCTCTTGCTGTCTCTGCTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000538763.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR TCA 90 bp AGAGGTCAGGTAAGCCAAGGAGCAGCGGAGCAGGTCAATCAGGGAAGTTCTGGGCCACAGGATAGTCCCTaGCAAAGTCCTGGTAGAGTG +
Preference number: 4 (lower is better)
Translates to: RGQVSQGAAEQVNQGSSGPQDSP*QSPGRV
Trigger: CACTCTACCAGGACTTTGTCAGGGACTATCCTGTGG...CCCAGAACTTCCCTGATTGACCTGCTCCGCTGCTCCTTGGCTTACCTGACCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000538763.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR TCA 90 bp AGCACACTGGGATTACGGAAGTTATGTCCGGCAAAGCGAGCTTCATCCCCCAGCGTCCTCAGTCTCTCCTaGGCGATGACTCACCATGAC +
Preference number: 4 (lower is better)
Translates to: STLGLRKLCPAKRASSPSVLSLS*AMTHHD
Trigger: GTCATGGTGAGTCATCGCTCAGGAGAGACTGAGGAC...GCTGGGGGATGAAGCTCGCTTTGCCGGACATAACTTCCGTAATCCCAGTGTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535275.5
CDS-3UTR TCA 90 bp GCACAAGTGACACATGGTCCCTCTCTAACACCTCAGCACACCAACCCTGACGCTGTCCTCAGTCTCTCCTaGGCGATGACTCACCATGAC +
Preference number: 4 (lower is better)
Translates to: AQVTHGPSLTPQHTNPDAVLSLS*AMTHHD
Trigger: GTCATGGTGAGTCATCGCTCAGGAGAGACTGAGGAC...AGCGTCAGGGTTGGTGTGCTGAGGTGTTAGAGAGGGACCATGTGTCACTTGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000538763.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR TCA 90 bp ACAGAAAGGAGGGCGAGCAGAGACAGCAAGAGGTCAGGTAAGCCAAGGAGCAGCCTTATTAGCCAGGCGTaGTCACATGCCCAACACTCC +
Preference number: 4 (lower is better)
Translates to: TERRASRDSKRSGKPRSSLISQA*SHAQHS
Trigger: GGAGTGTTGGGCATGTGATCACGCCTGGCTAATAAG...GCTGCTCCTTGGCTTACCTGACCTCTTGCTGTCTCTGCTCGCCCTCCTTTCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR TCA 90 bp CTGACGCTCCCATCACAGATGCTGATCATTCTTCCACGGACCCCCTTTTATAATCGGGGAAGAGGGTCCTaGGAAAGGCCCTGCAGTCCC +
Preference number: 4 (lower is better)
Translates to: LTLPSQMLIILPRTPFYNRGRGS*ERPCSP
Trigger: GGGACTGCAGGGCCTTTCTCAGGACCCTCTTCCCCG...ATTATAAAAGGGGGTCCGTGGAAGAATGATCAGCATCTGTGATGGGAGCGTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000535366.5
CDS-3UTR GCA 90 bp CACTGGGATTACGGAAGTTATGTCCGGCAAAGCGAGCTTCATCCCCCAGCTCTTAAAGTCCTGGTAGAGTaGCCCCAGCTGGTCCCCAGT +
Preference number: 4 (lower is better)
Translates to: HWDYGSYVRQSELHPPALKVLVE*PQLVPS
Trigger: ACTGGGGACCAGCTGGGGGCACTCTACCAGGACTTT...AAGAGCTGGGGGATGAAGCTCGCTTTGCCGGACATAACTTCCGTAATCCCAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000535275.5
CDS-3UTR GCA 90 bp GTGGCATGGGGAGTGAGAGGTTGCTCTGGTGCAGCTGGAGGAAGAACAGGGAACGGAAGAAGTGGAAAGTaGGGAACCCCAATGAGTAGG +
Preference number: 4 (lower is better)
Translates to: VAWGVRGCSGAAGGRTGNGRSGK*GTPMSR
Trigger: CCTACTCATTGGGGTTCCGCACTTTCCACTTCTTCC...GTTCCCTGTTCTTCCTCCAGCTGCACCAGAGCAACCTCTCACTCCCCATGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR GCA 90 bp AAAGGAGGGCGAGCAGAGACAGCAAGAGGTCAGGTAAGCCAAGGAGCAGCGGAGGGAAGAAGTGGAAAGTaGGGAACCCCAATGAGTAGG +
Preference number: 4 (lower is better)
Translates to: KGGRAETARGQVSQGAAEGRSGK*GTPMSR
Trigger: CCTACTCATTGGGGTTCCGCACTTTCCACTTCTTCC...CTCCGCTGCTCCTTGGCTTACCTGACCTCTTGCTGTCTCTGCTCGCCCTCCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000538763.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR GCA 90 bp TGGGATCTACAGCCACATGAAATACAGACACATCGTTCCCCCAAGTCAGGCCAGCAGCTGCCTGAACACTaGCCCTTCCCCAAGGTCCCA +
Preference number: 4 (lower is better)
Translates to: WDLQPHEIQTHRSPKSGQQLPEH*PFPKVP
Trigger: TGGGACCTTGGGGAAGGGGCAGTGTTCAGGCAGCTG...CTGGCCTGACTTGGGGGAACGATGTGTCTGTATTTCATGTGGCTGTAGATCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535366.5
CDS-3UTR GCA 90 bp CAAGGAGCAGCGGAGCAGGTCAATCAGGGAAGTTCTGGGCACCCTGGGGCTCAGCCCCAAACTTGGCTTTaGCTAAGTAACGCTGTTTGT +
Preference number: 4 (lower is better)
Translates to: QGAAEQVNQGSSGHPGAQPQTWL*LSNAVC
Trigger: ACAAACAGCGTTACTTAGGCAAAGCCAAGTTTGGGG...CTGAGCCCCAGGGTGCCCAGAACTTCCCTGATTGACCTGCTCCGCTGCTCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538763.5
CDS-3UTR CCA 90 bp GTGCTCATTTCAATGCCACAGAGGTGGTGGCAACTGTGGAACGTGGCATGGGGACTGCACCTAGTCGCATaGCATCCCGAAAGCTCTCAG +
Preference number: 4 (lower is better)
Translates to: VLISMPQRWWQLWNVAWGLHLVA*HPESSQ
Trigger: CTGAGAGCTTTCGGGATGCCATGCGACTAGGTGCAG...TCCCCATGCCACGTTCCACAGTTGCCACCACCTCTGTGGCATTGAAATGAGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
CDS-3UTR CCA 90 bp GCTCAGGGGATCTCAGGGGGTGAACTATCACAGATCAGGACAGCAAGGTTCCAGCTGCACCTAGTCGCATaGCATCCCGAAAGCTCTCAG +
Preference number: 4 (lower is better)
Translates to: AQGISGGELSQIRTARFQLHLVA*HPESSQ
Trigger: CTGAGAGCTTTCGGGATGCCATGCGACTAGGTGCAG...CTGGAACCTTGCTGTCCTGATCTGTGATAGTTCACCCCCTGAGATCCCCTGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000538763.5
ENST00000541477.5
CDS-3UTR CCA 90 bp TCACAGCACACTGGGATTACGGAAGTTATGTCCGGCAAAGCGAGCTTCATCCCCGCCAGCTTGCACGCTTaGATGGCTTCAGTGACCGAG +
Preference number: 4 (lower is better)
Translates to: SQHTGITEVMSGKASFIPASLHA*MASVTE
Trigger: CTCGGTCACTGAAGCCATCCAAGCGTGCAAGCTGGC...GGGGATGAAGCTCGCTTTGCCGGACATAACTTCCGTAATCCCAGTGTGCTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535275.5
CDS-3UTR CCA 90 bp CTTGGGATCTACAGCCACATGAAATACAGACACATCGTTCCCCCAAGTCAGGCCAAGTTCTGGGCACCCTaGGGCTCAGGGGATCTCAGG +
Preference number: 4 (lower is better)
Translates to: LGIYSHMKYRHIVPPSQAKFWAP*GSGDLR
Trigger: CCTGAGATCCCCTGAGCCCCAGGGTGCCCAGAACTT...GGCCTGACTTGGGGGAACGATGTGTCTGTATTTCATGTGGCTGTAGATCCCAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR CCA 90 bp GAGGAAAACTCCCCCAGGCACACAGCCTCCGCTCTGGACCAACGCAGGCTTCAGAGAGAAAGGAAGAAGTaGAAAGTGCGGAACCCCAAT +
Preference number: 4 (lower is better)
Translates to: EENSPRHTASALDQRRLQRERKK*KVRNPN
Trigger: ATTGGGGTTCCGCACTTTCCACTTCTTCCTTTCTCT...CTGAAGCCTGCGTTGGTCCAGAGCGGAGGCTGTGTGCCTGGGGGAGTTTTCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR CCA 90 bp GCTCAGGGGATCTCAGGGGGTGAACTATCACAGATCAGGACAGCAAGGTTCCAGCTGTGGAACGTGGCATaGGGAGTGAGAGGTTGCTCT +
Preference number: 4 (lower is better)
Translates to: AQGISGGELSQIRTARFQLWNVA*GVRGCS
Trigger: AGAGCAACCTCTCACTCCCCATGCCACGTTCCACAG...CTGGAACCTTGCTGTCCTGATCTGTGATAGTTCACCCCCTGAGATCCCCTGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR TCA 90 bp TGGGATCTACAGCCACATGAAATACAGACACATCGTTCCCCCAAGTCAGGCCAGGCGCGATGGTGGAGTTaGTGTGGTCCACTGCCTTCA +
Preference number: 4 (lower is better)
Translates to: WDLQPHEIQTHRSPKSGQARWWS*CGPLPS
Trigger: TGAAGGCAGTGGACCACATCAACTCCACCATCGCGC...CTGGCCTGACTTGGGGGAACGATGTGTCTGTATTTCATGTGGCTGTAGATCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR TCA 90 bp CTAACACCTCAGCACACCAACCCTGACGCTCCCATCACAGATGCTGATCATTCTGCGCGATGGTGGAGTTaGTGTGGTCCACTGCCTTCA +
Preference number: 4 (lower is better)
Translates to: LTPQHTNPDAPITDADHSARWWS*CGPLPS
Trigger: TGAAGGCAGTGGACCACATCAACTCCACCATCGCGC...AGAATGATCAGCATCTGTGATGGGAGCGTCAGGGTTGGTGTGCTGAGGTGTTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR TCA 90 bp AAAGGAGGGCGAGCAGAGACAGCAAGAGGTCAGGTAAGCCAAGGAGCAGCGGAGATCACGATAAAACTCTaGGGCAGCAACATCCATGCC +
Preference number: 4 (lower is better)
Translates to: KGGRAETARGQVSQGAAEITIKL*GSNIHA
Trigger: GGCATGGATGTTGCTGCCTCAGAGTTTTATCGTGAT...CTCCGCTGCTCCTTGGCTTACCTGACCTCTTGCTGTCTCTGCTCGCCCTCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000538763.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR TCA 90 bp ATAGAGGAAAACTCCCCCAGGCACACAGCCTCCGCTCTGGACCAACGCAGGCTTATCACGATAAAACTCTaGGGCAGCAACATCCATGCC +
Preference number: 4 (lower is better)
Translates to: IEENSPRHTASALDQRRLITIKL*GSNIHA
Trigger: GGCATGGATGTTGCTGCCTCAGAGTTTTATCGTGAT...AAGCCTGCGTTGGTCCAGAGCGGAGGCTGTGTGCCTGGGGGAGTTTTCCTCTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR TCA 90 bp ACCCTGACGCTCCCATCACAGATGCTGATCATTCTTCCACGGACCCCCTTTTATCCAGCTGGTCCCCAGTaGTGTATCGGGAAGGATCAG +
Preference number: 4 (lower is better)
Translates to: TLTLPSQMLIILPRTPFYPAGPQ*CIGKDQ
Trigger: CTGATCCTTCCCGATACATCACTGGGGACCAGCTGG...ATAAAAGGGGGTCCGTGGAAGAATGATCAGCATCTGTGATGGGAGCGTCAGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000538763.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR TCA 90 bp CAAGGTTCCAGGAGGATGAGACAGAGGTTCCACGTCTCCAGGCAAGCAGAGGAACCACAGGATAGTCCCTaGCAAAGTCCTGGTAGAGTG +
Preference number: 4 (lower is better)
Translates to: QGSRRMRQRFHVSRQAEEPQDSP*QSPGRV
Trigger: CACTCTACCAGGACTTTGTCAGGGACTATCCTGTGG...TTCCTCTGCTTGCCTGGAGACGTGGAACCTCTGTCTCATCCTCCTGGAACCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000538763.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR TCA 90 bp CCAACCCTGACGCTCCCATCACAGATGCTGATCATTCTTCCACGGACCCCCTTTCCACAGGATAGTCCCTaGCAAAGTCCTGGTAGAGTG +
Preference number: 4 (lower is better)
Translates to: PTLTLPSQMLIILPRTPFPQDSP*QSPGRV
Trigger: CACTCTACCAGGACTTTGTCAGGGACTATCCTGTGG...AAAGGGGGTCCGTGGAAGAATGATCAGCATCTGTGATGGGAGCGTCAGGGTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000538763.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR TCA 90 bp GTGCTCATTTCAATGCCACAGAGGTGGTGGCAACTGTGGAACGTGGCATGGGGAAAGGTTCCAGGAGGATaGGACAGAGGTTCCACGTCT +
Preference number: 4 (lower is better)
Translates to: VLISMPQRWWQLWNVAWGKVPGG*DRGSTS
Trigger: AGACGTGGAACCTCTGTCTCATCCTCCTGGAACCTT...TCCCCATGCCACGTTCCACAGTTGCCACCACCTCTGTGGCATTGAAATGAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR TCA 90 bp GCTCAGGGGATCTCAGGGGGTGAACTATCACAGATCAGGACAGCAAGGTTCCAGAAGGTTCCAGGAGGATaGGACAGAGGTTCCACGTCT +
Preference number: 4 (lower is better)
Translates to: AQGISGGELSQIRTARFQKVPGG*DRGSTS
Trigger: AGACGTGGAACCTCTGTCTCATCCTCCTGGAACCTT...CTGGAACCTTGCTGTCCTGATCTGTGATAGTTCACCCCCTGAGATCCCCTGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000538763.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR TCA 90 bp GAGGTGCTCATTTCAATGCCACAGAGGTGGTGGCAACTGTGGAACGTGGCATGGTCCCATCACAGATGCTaGTCATTCTTCCACGGACCC +
Preference number: 4 (lower is better)
Translates to: EVLISMPQRWWQLWNVAWSHHRC*SFFHGP
Trigger: GGGTCCGTGGAAGAATGATCAGCATCTGTGATGGGA...CCATGCCACGTTCCACAGTTGCCACCACCTCTGTGGCATTGAAATGAGCACCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR TCA 90 bp GCTCAGGGGATCTCAGGGGGTGAACTATCACAGATCAGGACAGCAAGGTTCCAGTCCCATCACAGATGCTaGTCATTCTTCCACGGACCC +
Preference number: 4 (lower is better)
Translates to: AQGISGGELSQIRTARFQSHHRC*SFFHGP
Trigger: GGGTCCGTGGAAGAATGATCAGCATCTGTGATGGGA...CTGGAACCTTGCTGTCCTGATCTGTGATAGTTCACCCCCTGAGATCCCCTGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000538763.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR TCA 90 bp CTAACACCTCAGCACACCAACCCTGACGCTCCCATCACAGATGCTGATCATTCTTCAGCACACCAACCCTaGCGCTCCCATCACAGATGC +
Preference number: 4 (lower is better)
Translates to: LTPQHTNPDAPITDADHSSAHQP*RSHHRC
Trigger: GCATCTGTGATGGGAGCGTCAGGGTTGGTGTGCTGA...AGAATGATCAGCATCTGTGATGGGAGCGTCAGGGTTGGTGTGCTGAGGTGTTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000538763.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR TCA 90 bp CTTGGGATCTACAGCCACATGAAATACAGACACATCGTTCCCCCAAGTCAGGCCTCAGCACACCAACCCTaGCGCTCCCATCACAGATGC +
Preference number: 4 (lower is better)
Translates to: LGIYSHMKYRHIVPPSQASAHQP*RSHHRC
Trigger: GCATCTGTGATGGGAGCGTCAGGGTTGGTGTGCTGA...GGCCTGACTTGGGGGAACGATGTGTCTGTATTTCATGTGGCTGTAGATCCCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR TCA 90 bp GAGGTGCTCATTTCAATGCCACAGAGGTGGTGGCAACTGTGGAACGTGGCATGGCTTATTAGCCAGGCGTaGTCACATGCCCAACACTCC +
Preference number: 4 (lower is better)
Translates to: EVLISMPQRWWQLWNVAWLISQA*SHAQHS
Trigger: GGAGTGTTGGGCATGTGATCACGCCTGGCTAATAAG...CCATGCCACGTTCCACAGTTGCCACCACCTCTGTGGCATTGAAATGAGCACCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR TCA 90 bp GTGCTCATTTCAATGCCACAGAGGTGGTGGCAACTGTGGAACGTGGCATGGGGACTTATTAGCCAGGCGTaGTCACATGCCCAACACTCC +
Preference number: 4 (lower is better)
Translates to: VLISMPQRWWQLWNVAWGLISQA*SHAQHS
Trigger: GGAGTGTTGGGCATGTGATCACGCCTGGCTAATAAG...TCCCCATGCCACGTTCCACAGTTGCCACCACCTCTGTGGCATTGAAATGAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR TCA 90 bp CAAGGTTCCAGGAGGATGAGACAGAGGTTCCACGTCTCCAGGCAAGCAGAGGAACTTATTAGCCAGGCGTaGTCACATGCCCAACACTCC +
Preference number: 4 (lower is better)
Translates to: QGSRRMRQRFHVSRQAEELISQA*SHAQHS
Trigger: GGAGTGTTGGGCATGTGATCACGCCTGGCTAATAAG...TTCCTCTGCTTGCCTGGAGACGTGGAACCTCTGTCTCATCCTCCTGGAACCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR TCA 90 bp AGAGGAAAACTCCCCCAGGCACACAGCCTCCGCTCTGGACCAACGCAGGCTTCAGGATCTACAGCCACATaGAATACAGACACATCGTTC +
Preference number: 4 (lower is better)
Translates to: RGKLPQAHSLRSGPTQASGSTAT*NTDTSF
Trigger: GAACGATGTGTCTGTATTTCATGTGGCTGTAGATCC...TGAAGCCTGCGTTGGTCCAGAGCGGAGGCTGTGTGCCTGGGGGAGTTTTCCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR TCA 90 bp CGAGCAGAGACAGCAAGAGGTCAGGTAAGCCAAGGAGCAGCGGAGCAGGTCAATCAACGCAGGCTTCAGTaGGTACACACAAAGGAACTG +
Preference number: 4 (lower is better)
Translates to: RAETARGQVSQGAAEQVNQRRLQ*VHTKEL
Trigger: CAGTTCCTTTGTGTGTACTCACTGAAGCCTGCGTTG...ATTGACCTGCTCCGCTGCTCCTTGGCTTACCTGACCTCTTGCTGTCTCTGCTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR TCA 90 bp ACCCCAATGAGTAGGGCACAGAAAGGAGGGCGAGCAGAGACAGCAAGAGGTCAGCAACGCAGGCTTCAGTaGGTACACACAAAGGAACTG +
Preference number: 4 (lower is better)
Translates to: TPMSRAQKGGRAETARGQQRRLQ*VHTKEL
Trigger: CAGTTCCTTTGTGTGTACTCACTGAAGCCTGCGTTG...CTGACCTCTTGCTGTCTCTGCTCGCCCTCCTTTCTGTGCCCTACTCATTGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR GCA 90 bp CTGACGCTCCCATCACAGATGCTGATCATTCTTCCACGGACCCCCTTTTATAATCAGTTCCCGCTCAGCTaGCCCTGCCTTACACACGGC +
Preference number: 4 (lower is better)
Translates to: LTLPSQMLIILPRTPFYNQFPLS*PCLTHG
Trigger: GCCGTGTGTAAGGCAGGGGCAGCTGAGCGGGAACTG...ATTATAAAAGGGGGTCCGTGGAAGAATGATCAGCATCTGTGATGGGAGCGTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000538763.5
ENST00000541477.5
CDS-3UTR GCA 90 bp GGAGCAGCGGAGCAGGTCAATCAGGGAAGTTCTGGGCACCCTGGGGCTCAGGGGAGTCCAAGTCATATTTaGCATCACGATAAAACTCTG +
Preference number: 4 (lower is better)
Translates to: GAAEQVNQGSSGHPGAQGSPSHI*HHDKTL
Trigger: CAGAGTTTTATCGTGATGGCAAATATGACTTGGACT...CCCCTGAGCCCCAGGGTGCCCAGAACTTCCCTGATTGACCTGCTCCGCTGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000538763.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR GCA 90 bp ACAGAAAGGAGGGCGAGCAGAGACAGCAAGAGGTCAGGTAAGCCAAGGAGCAGCGGCCTTTTCTTCCACTaGCCGCTCAATACGTTTTGG +
Preference number: 4 (lower is better)
Translates to: TERRASRDSKRSGKPRSSGLFFH*PLNTFW
Trigger: CCAAAACGTATTGAGCGGGCAGTGGAAGAAAAGGCC...GCTGCTCCTTGGCTTACCTGACCTCTTGCTGTCTCTGCTCGCCCTCCTTTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000538763.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR GCA 90 bp ACAGAAAGGAGGGCGAGCAGAGACAGCAAGAGGTCAGGTAAGCCAAGGAGCAGCGGAAGAAGTGGAAAGTaGGGAACCCCAATGAGTAGG +
Preference number: 4 (lower is better)
Translates to: TERRASRDSKRSGKPRSSGRSGK*GTPMSR
Trigger: CCTACTCATTGGGGTTCCGCACTTTCCACTTCTTCC...GCTGCTCCTTGGCTTACCTGACCTCTTGCTGTCTCTGCTCGCCCTCCTTTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000538763.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR GCA 90 bp ACCCCAATGAGTAGGGCACAGAAAGGAGGGCGAGCAGAGACAGCAAGAGGTCAGGGAAGAAGTGGAAAGTaGGGAACCCCAATGAGTAGG +
Preference number: 4 (lower is better)
Translates to: TPMSRAQKGGRAETARGQGRSGK*GTPMSR
Trigger: CCTACTCATTGGGGTTCCGCACTTTCCACTTCTTCC...CTGACCTCTTGCTGTCTCTGCTCGCCCTCCTTTCTGTGCCCTACTCATTGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000538763.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR GCA 90 bp CCAGGCACACAGCCTCCGCTCTGGACCAACGCAGGCTTCAGTGAGTACACACAATCCATCCCAGCACTATaGACAGTTCACGGCTCATAT +
Preference number: 4 (lower is better)
Translates to: PGTQPPLWTNAGFSEYTQSIPAL*TVHGSY
Trigger: ATATGAGCCGTGAACTGTGCATAGTGCTGGGATGGA...TTGTGTGTACTCACTGAAGCCTGCGTTGGTCCAGAGCGGAGGCTGTGTGCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR GCA 90 bp CTAACACCTCAGCACACCAACCCTGACGCTCCCATCACAGATGCTGATCATTCTCCAGGCGTGATCACATaGCCAACACTCCCCTCCATC +
Preference number: 4 (lower is better)
Translates to: LTPQHTNPDAPITDADHSPGVIT*PTLPSI
Trigger: GATGGAGGGGAGTGTTGGGCATGTGATCACGCCTGG...AGAATGATCAGCATCTGTGATGGGAGCGTCAGGGTTGGTGTGCTGAGGTGTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR GCA 90 bp TGGGATCTACAGCCACATGAAATACAGACACATCGTTCCCCCAAGTCAGGCCAGCCAGGCGTGATCACATaGCCAACACTCCCCTCCATC +
Preference number: 4 (lower is better)
Translates to: WDLQPHEIQTHRSPKSGQPGVIT*PTLPSI
Trigger: GATGGAGGGGAGTGTTGGGCATGTGATCACGCCTGG...CTGGCCTGACTTGGGGGAACGATGTGTCTGTATTTCATGTGGCTGTAGATCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR GCA 90 bp CTAACACCTCAGCACACCAACCCTGACGCTCCCATCACAGATGCTGATCATTCTTGGGGAGTGAGAGGTTaGTCTGGTGCAGCTGGAGGA +
Preference number: 4 (lower is better)
Translates to: LTPQHTNPDAPITDADHSWGVRG*SGAAGG
Trigger: TCCTCCAGCTGCACCAGAGCAACCTCTCACTCCCCA...AGAATGATCAGCATCTGTGATGGGAGCGTCAGGGTTGGTGTGCTGAGGTGTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR GCA 90 bp CAAGGTTCCAGGAGGATGAGACAGAGGTTCCACGTCTCCAGGCAAGCAGAGGAAAGAGGAGAAGGTCAATaGAGTGAGGAAGGGGAGGTC +
Preference number: 4 (lower is better)
Translates to: QGSRRMRQRFHVSRQAEERGEGQ*SEEGEV
Trigger: GACCTCCCCTTCCTCACTGCATTGACCTTCTCCTCT...TTCCTCTGCTTGCCTGGAGACGTGGAACCTCTGTCTCATCCTCCTGGAACCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535366.5
CDS-3UTR GCA 90 bp CTTGGGATCTACAGCCACATGAAATACAGACACATCGTTCCCCCAAGTCAGGCCCCCGCGAAAGGCGCATaGAATACAGGTGTCGGGGAA +
Preference number: 4 (lower is better)
Translates to: LGIYSHMKYRHIVPPSQAPAKGA*NTGVGE
Trigger: TTCCCCGACACCTGTATTGCATGCGCCTTTCGCGGG...GGCCTGACTTGGGGGAACGATGTGTCTGTATTTCATGTGGCTGTAGATCCCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000535366.5
CDS-3UTR CCA 90 bp GCCTTATTAGCCAGGCGTGATCACATGCCCAACACTCCCCTCCATCCCAGCACTATGGTGGAGTTGATGTaGTCCACTGCCTTCAGGACA +
Preference number: 4 (lower is better)
Translates to: ALLARRDHMPNTPLHPSTMVELM*STAFRT
Trigger: TGTCCTGAAGGCAGTGGACCACATCAACTCCACCAT...AGTGCTGGGATGGAGGGGAGTGTTGGGCATGTGATCACGCCTGGCTAATAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR CCA 90 bp ATGGGGAGTGAGAGGTTGCTCTGGTGCAGCTGGAGGAAGAACAGGGAACCTAGGCAAATGGGTCCTCAATaGAGACCACAGGATAGTCCC +
Preference number: 4 (lower is better)
Translates to: MGSERLLWCSWRKNREPRQMGPQ*RPQDSP
Trigger: GGGACTATCCTGTGGTCTCCATTGAGGACCCATTTG...CCTAGGTTCCCTGTTCTTCCTCCAGCTGCACCAGAGCAACCTCTCACTCCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR CCA 90 bp ACCCCAATGAGTAGGGCACAGAAAGGAGGGCGAGCAGAGACAGCAAGAGGTCAGCAAATGGGTCCTCAATaGAGACCACAGGATAGTCCC +
Preference number: 4 (lower is better)
Translates to: TPMSRAQKGGRAETARGQQMGPQ*RPQDSP
Trigger: GGGACTATCCTGTGGTCTCCATTGAGGACCCATTTG...CTGACCTCTTGCTGTCTCTGCTCGCCCTCCTTTCTGTGCCCTACTCATTGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000538763.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR CCA 90 bp ATAGAGGAAAACTCCCCCAGGCACACAGCCTCCGCTCTGGACCAACGCAGGCTTTCATCACCCACAATCTaGATCCCTACATTGGCTGTG +
Preference number: 4 (lower is better)
Translates to: IEENSPRHTASALDQRRLSSPTI*IPTLAV
Trigger: CACAGCCAATGTAGGGATCCAGATTGTGGGTGATGA...AAGCCTGCGTTGGTCCAGAGCGGAGGCTGTGTGCCTGGGGGAGTTTTCCTCTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR CCA 90 bp CTAACACCTCAGCACACCAACCCTGACGCTCCCATCACAGATGCTGATCATTCTGCCAGCTTGCACGCTTaGATGGCTTCAGTGACCGAG +
Preference number: 4 (lower is better)
Translates to: LTPQHTNPDAPITDADHSASLHA*MASVTE
Trigger: CTCGGTCACTGAAGCCATCCAAGCGTGCAAGCTGGC...AGAATGATCAGCATCTGTGATGGGAGCGTCAGGGTTGGTGTGCTGAGGTGTTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000538763.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR CCA 90 bp AGAGGAAAACTCCCCCAGGCACACAGCCTCCGCTCTGGACCAACGCAGGCTTCAGGAATCACAGCACACTaGGATTACGGAAGTTATGTC +
Preference number: 4 (lower is better)
Translates to: RGKLPQAHSLRSGPTQASGITAH*DYGSYV
Trigger: GACATAACTTCCGTAATCCCAGTGTGCTGTGATTCC...TGAAGCCTGCGTTGGTCCAGAGCGGAGGCTGTGTGCCTGGGGGAGTTTTCCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR CCA 90 bp GCTCAGGGGATCTCAGGGGGTGAACTATCACAGATCAGGACAGCAAGGTTCCAGTTGCTCTGGTGCAGCTaGAGGAAGAACAGGGAACCT +
Preference number: 4 (lower is better)
Translates to: AQGISGGELSQIRTARFQLLWCS*RKNREP
Trigger: AGGTTCCCTGTTCTTCCTCCAGCTGCACCAGAGCAA...CTGGAACCTTGCTGTCCTGATCTGTGATAGTTCACCCCCTGAGATCCCCTGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR CCA 90 bp CCAACCCTGACGCTCCCATCACAGATGCTGATCATTCTTCCACGGACCCCCTTTTTGCTCTGGTGCAGCTaGAGGAAGAACAGGGAACCT +
Preference number: 4 (lower is better)
Translates to: PTLTLPSQMLIILPRTPFLLWCS*RKNREP
Trigger: AGGTTCCCTGTTCTTCCTCCAGCTGCACCAGAGCAA...AAAGGGGGTCCGTGGAAGAATGATCAGCATCTGTGATGGGAGCGTCAGGGTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR CCA 90 bp CTAACACCTCAGCACACCAACCCTGACGCTCCCATCACAGATGCTGATCATTCTAGGTGGTGGCAACTGTaGAACGTGGCATGGGGAGTG +
Preference number: 4 (lower is better)
Translates to: LTPQHTNPDAPITDADHSRWWQL*NVAWGV
Trigger: CACTCCCCATGCCACGTTCCACAGTTGCCACCACCT...AGAATGATCAGCATCTGTGATGGGAGCGTCAGGGTTGGTGTGCTGAGGTGTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR CCA 90 bp CCAACCCTGACGCTCCCATCACAGATGCTGATCATTCTTCCACGGACCCCCTTTTATGGACATGATGGCTaGGATCTCCTCGGGACTGCA +
Preference number: 4 (lower is better)
Translates to: PTLTLPSQMLIILPRTPFYGHDG*DLLGTA
Trigger: TGCAGTCCCGAGGAGATCCCAGCCATCATGTCCATA...AAAGGGGGTCCGTGGAAGAATGATCAGCATCTGTGATGGGAGCGTCAGGGTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538763.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR CCA 90 bp CTCATTTCAATGCCACAGAGGTGGTGGCAACTGTGGAACGTGGCATGGGGAGTGTATGGACATGATGGCTaGGATCTCCTCGGGTGGAAG +
Preference number: 4 (lower is better)
Translates to: LISMPQRWWQLWNVAWGVYGHDG*DLLGWK
Trigger: CTTCCACCCGAGGAGATCCCAGCCATCATGTCCATA...CACTCCCCATGCCACGTTCCACAGTTGCCACCACCTCTGTGGCATTGAAATGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535366.5
CDS-3UTR TCA 90 bp ACTGGGATTACGGAAGTTATGTCCGGCAAAGCGAGCTTCATCCCCCAGCTCTTCAAGGTTCCAGGAGGATaGGACAGAGGTTCCACGTCT +
Preference number: 4 (lower is better)
Translates to: TGITEVMSGKASFIPQLFKVPGG*DRGSTS
Trigger: AGACGTGGAACCTCTGTCTCATCCTCCTGGAACCTT...GAAGAGCTGGGGGATGAAGCTCGCTTTGCCGGACATAACTTCCGTAATCCCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543975.1
CDS-3UTR TCA 90 bp TGGGATCTACAGCCACATGAAATACAGACACATCGTTCCCCCAAGTCAGGCCAGGGGGATCTCAGGGGGTaGACTATCACAGATCAGGAC +
Preference number: 4 (lower is better)
Translates to: WDLQPHEIQTHRSPKSGQGDLRG*TITDQD
Trigger: GTCCTGATCTGTGATAGTTCACCCCCTGAGATCCCC...CTGGCCTGACTTGGGGGAACGATGTGTCTGTATTTCATGTGGCTGTAGATCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR TCA 90 bp GACTTTAATGGAGGTGCTCATTTCAATGCCACAGAGGTGGTGGCAACTGTGGAAACGTGGCATGGGGAGTaGGAGGTTGCTCTGGTGCAG +
Preference number: 4 (lower is better)
Translates to: DFNGGAHFNATEVVATVETWHGE*EVALVQ
Trigger: CTGCACCAGAGCAACCTCTCACTCCCCATGCCACGT...TTCCACAGTTGCCACCACCTCTGTGGCATTGAAATGAGCACCTCCATTAAAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR TCA 90 bp GATCTACAGCCACATGAAATACAGACACATCGTTCCCCCAAGTCAGGCCAGTTTACGTGGCATGGGGAGTaGGAGGTTGCTCTGGTGCAG +
Preference number: 4 (lower is better)
Translates to: DLQPHEIQTHRSPKSGQFTWHGE*EVALVQ
Trigger: CTGCACCAGAGCAACCTCTCACTCCCCATGCCACGT...AAACTGGCCTGACTTGGGGGAACGATGTGTCTGTATTTCATGTGGCTGTAGATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR GCA 90 bp ATAGAGGAAAACTCCCCCAGGCACACAGCCTCCGCTCTGGACCAACGCAGGCTTCCTTCAGGACACCTTTaGCTAAGTAACGCTGTTTGT +
Preference number: 4 (lower is better)
Translates to: IEENSPRHTASALDQRRLPSGHL*LSNAVC
Trigger: ACAAACAGCGTTACTTAGGCAAAGGTGTCCTGAAGG...AAGCCTGCGTTGGTCCAGAGCGGAGGCTGTGTGCCTGGGGGAGTTTTCCTCTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR GCA 90 bp CCTTTCTATGACCCTTCCCATTCTAGCAAGACCTCCCACCCCAGTCATCTTGGGGTTGATGTGGTCCACTaGCTTCAGGACACCTTTGCC +
Preference number: 4 (lower is better)
Translates to: PFYDPSHSSKTSHPSHLGVDVVH*LQDTFA
Trigger: GGCAAAGGTGTCCTGAAGGCAGTGGACCACATCAAC...CCCAAGATGACTGGGGTGGGAGGTCTTGCTAGAATGGGAAGGGTCATAGAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR GCA 90 bp GCTCAGGGGATCTCAGGGGGTGAACTATCACAGATCAGGACAGCAAGGTTCCAGGGCCTTTTCTTCCACTaGCCGCTCAATACGTTTTGG +
Preference number: 4 (lower is better)
Translates to: AQGISGGELSQIRTARFQGLFFH*PLNTFW
Trigger: CCAAAACGTATTGAGCGGGCAGTGGAAGAAAAGGCC...CTGGAACCTTGCTGTCCTGATCTGTGATAGTTCACCCCCTGAGATCCCCTGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000538763.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR GCA 90 bp CTTGGGATCTACAGCCACATGAAATACAGACACATCGTTCCCCCAAGTCAGGCCGAGAGGTTGCTCTGGTaGAGCTGGAGGAAGAACAGG +
Preference number: 4 (lower is better)
Translates to: LGIYSHMKYRHIVPPSQAERLLW*SWRKNR
Trigger: CCTGTTCTTCCTCCAGCTGCACCAGAGCAACCTCTC...GGCCTGACTTGGGGGAACGATGTGTCTGTATTTCATGTGGCTGTAGATCCCAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR CCA 90 bp ACCCCAATGAGTAGGGCACAGAAAGGAGGGCGAGCAGAGACAGCAAGAGGTCAGCCCGGAAAAGACCTTTaGCAGTATAGAGATCCACCT +
Preference number: 4 (lower is better)
Translates to: TPMSRAQKGGRAETARGQPGKDL*QYRDPP
Trigger: AGGTGGATCTCTATACTGCCAAAGGTCTTTTCCGGG...CTGACCTCTTGCTGTCTCTGCTCGCCCTCCTTTCTGTGCCCTACTCATTGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000538763.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR CCA 90 bp ACAGAAAGGAGGGCGAGCAGAGACAGCAAGAGGTCAGGTAAGCCAAGGAGCAGCCCCGGAAAAGACCTTTaGCAGTATAGAGATCCACCT +
Preference number: 4 (lower is better)
Translates to: TERRASRDSKRSGKPRSSPGKDL*QYRDPP
Trigger: AGGTGGATCTCTATACTGCCAAAGGTCTTTTCCGGG...GCTGCTCCTTGGCTTACCTGACCTCTTGCTGTCTCTGCTCGCCCTCCTTTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000538763.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR CCA 90 bp CAAGGTTCCAGGAGGATGAGACAGAGGTTCCACGTCTCCAGGCAAGCAGAGGAAATGGTGGAGTTGATGTaGTCCACTGCCTTCAGGACA +
Preference number: 4 (lower is better)
Translates to: QGSRRMRQRFHVSRQAEEMVELM*STAFRT
Trigger: TGTCCTGAAGGCAGTGGACCACATCAACTCCACCAT...TTCCTCTGCTTGCCTGGAGACGTGGAACCTCTGTCTCATCCTCCTGGAACCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR CCA 90 bp CTCATTTCAATGCCACAGAGGTGGTGGCAACTGTGGAACGTGGCATGGGGAGTGATGGTGGAGTTGATGTaGTCCACTGCCTTCAGGACA +
Preference number: 4 (lower is better)
Translates to: LISMPQRWWQLWNVAWGVMVELM*STAFRT
Trigger: TGTCCTGAAGGCAGTGGACCACATCAACTCCACCAT...CACTCCCCATGCCACGTTCCACAGTTGCCACCACCTCTGTGGCATTGAAATGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR CCA 90 bp GTGCTCATTTCAATGCCACAGAGGTGGTGGCAACTGTGGAACGTGGCATGGGGACACCCAGGATGGCATTaGCCCCAAACTTGGATTTGT +
Preference number: 4 (lower is better)
Translates to: VLISMPQRWWQLWNVAWGHPGWH*PQTWIC
Trigger: ACAAATCCAAGTTTGGGGCCAATGCCATCCTGGGTG...TCCCCATGCCACGTTCCACAGTTGCCACCACCTCTGTGGCATTGAAATGAGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
CDS-3UTR CCA 90 bp CAAGGTTCCAGGAGGATGAGACAGAGGTTCCACGTCTCCAGGCAAGCAGAGGAACCGCTCAATACGTTTTaGGTTGGTCACTGTCAGGTC +
Preference number: 4 (lower is better)
Translates to: QGSRRMRQRFHVSRQAEEPLNTF*VGHCQV
Trigger: GACCTGACAGTGACCAACCCAAAACGTATTGAGCGG...TTCCTCTGCTTGCCTGGAGACGTGGAACCTCTGTCTCATCCTCCTGGAACCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000538763.5
ENST00000541477.5
ENST00000543975.1
ENST00000545045.6
CDS-3UTR CCA 90 bp GACTTTAATGGAGGTGCTCATTTCAATGCCACAGAGGTGGTGGCAACTGTGGAACAATCAGGGAAGTTCTaGGCACCCTGGGGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: DFNGGAHFNATEVVATVEQSGKF*APWGSG
Trigger: CCCTGAGCCCCAGGGTGCCCAGAACTTCCCTGATTG...TTCCACAGTTGCCACCACCTCTGTGGCATTGAAATGAGCACCTCCATTAAAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR CCA 90 bp GTGCTCATTTCAATGCCACAGAGGTGGTGGCAACTGTGGAACGTGGCATGGGGACCACCCCAGTCATCTTaGGATCTACAGCCACATGAA +
Preference number: 4 (lower is better)
Translates to: VLISMPQRWWQLWNVAWGPPQSS*DLQPHE
Trigger: TTCATGTGGCTGTAGATCCCAAGATGACTGGGGTGG...TCCCCATGCCACGTTCCACAGTTGCCACCACCTCTGTGGCATTGAAATGAGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR CCA 90 bp ACGCTCCCATCACAGATGCTGATCATTCTTCCACGGACCCCCTTTTATAATAATAGGCCCTGCAGTCCCTaGGGGTTGCAGCGGGAAGTG +
Preference number: 4 (lower is better)
Translates to: TLPSQMLIILPRTPFYNNRPCSP*GLQREV
Trigger: CACTTCCCGCTGCAACCCCCAGGGACTGCAGGGCCT...ATTATTATAAAAGGGGGTCCGTGGAAGAATGATCAGCATCTGTGATGGGAGCGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000535366.5
CDS-3UTR CCA 90 bp CGAGCAGAGACAGCAAGAGGTCAGGTAAGCCAAGGAGCAGCGGAGCAGGTCAATCATTGGCCCCAAACTTaGCTTTGCCTAAGTAACGCT +
Preference number: 4 (lower is better)
Translates to: RAETARGQVSQGAAEQVNHWPQT*LCLSNA
Trigger: AGCGTTACTTAGGCAAAGCCAAGTTTGGGGCCAATG...ATTGACCTGCTCCGCTGCTCCTTGGCTTACCTGACCTCTTGCTGTCTCTGCTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538763.5
CDS-3UTR CCA 90 bp ACTGGGATTACGGAAGTTATGTCCGGCAAAGCGAGCTTCATCCCCCAGCTCTTCGGTGTTCATCTTCCCTaGGTCTCTACATCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: TGITEVMSGKASFIPQLFGVHLP*VSTSGR
Trigger: CCTGCCTGATGTAGAGACCCAGGGAAGATGAACACC...GAAGAGCTGGGGGATGAAGCTCGCTTTGCCGGACATAACTTCCGTAATCCCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535275.5
CDS-3UTR CCA 90 bp CAGCACACTGGGATTACGGAAGTTATGTCCGGCAAAGCGAGCTTCATCCCCCAGACCAGTCTTGATGCTTaGATGGCTTCAGTGACCGAG +
Preference number: 4 (lower is better)
Translates to: QHTGITEVMSGKASFIPQTSLDA*MASVTE
Trigger: CTCGGTCACTGAAGCCATCCAAGCATCAAGACTGGT...CTGGGGGATGAAGCTCGCTTTGCCGGACATAACTTCCGTAATCCCAGTGTGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543975.1
CDS-3UTR TCA 90 bp ACCCCAATGAGTAGGGCACAGAAAGGAGGGCGAGCAGAGACAGCAAGAGGTCAGGATCAGTGGGAGACTTaGAGTCCAAGTCATATTTGC +
Preference number: 4 (lower is better)
Translates to: TPMSRAQKGGRAETARGQDQWET*SPSHIC
Trigger: GCAAATATGACTTGGACTTCAAGTCTCCCACTGATC...CTGACCTCTTGCTGTCTCTGCTCGCCCTCCTTTCTGTGCCCTACTCATTGGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000538763.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR TCA 90 bp GCCTTATTAGCCAGGCGTGATCACATGCCCAACACTCCCCTCCATCCCAGCACTGATCAGTGGGAGACTTaGAGTCCAAGTCATATTTGC +
Preference number: 4 (lower is better)
Translates to: ALLARRDHMPNTPLHPSTDQWET*SPSHIC
Trigger: GCAAATATGACTTGGACTTCAAGTCTCCCACTGATC...AGTGCTGGGATGGAGGGGAGTGTTGGGCATGTGATCACGCCTGGCTAATAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR TCA 90 bp ACCCTGACGCTCCCATCACAGATGCTGATCATTCTTCCACGGACCCCCTTTTATAAGGTTCCAGGAGGATaGGACAGAGGTTCCACGTCT +
Preference number: 4 (lower is better)
Translates to: TLTLPSQMLIILPRTPFYKVPGG*DRGSTS
Trigger: AGACGTGGAACCTCTGTCTCATCCTCCTGGAACCTT...ATAAAAGGGGGTCCGTGGAAGAATGATCAGCATCTGTGATGGGAGCGTCAGGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000538763.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR TCA 90 bp ACCCCAATGAGTAGGGCACAGAAAGGAGGGCGAGCAGAGACAGCAAGAGGTCAGGGATCTACAGCCACATaGAATACAGACACATCGTTC +
Preference number: 4 (lower is better)
Translates to: TPMSRAQKGGRAETARGQGSTAT*NTDTSF
Trigger: GAACGATGTGTCTGTATTTCATGTGGCTGTAGATCC...CTGACCTCTTGCTGTCTCTGCTCGCCCTCCTTTCTGTGCCCTACTCATTGGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR GCA 90 bp ACCCTGACGCTCCCATCACAGATGCTGATCATTCTTCCACGGACCCCCTTTTATGTTGATGTGGTCCACTaGCTTCAGGACACCTTTGCC +
Preference number: 4 (lower is better)
Translates to: TLTLPSQMLIILPRTPFYVDVVH*LQDTFA
Trigger: GGCAAAGGTGTCCTGAAGGCAGTGGACCACATCAAC...ATAAAAGGGGGTCCGTGGAAGAATGATCAGCATCTGTGATGGGAGCGTCAGGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR GCA 90 bp TGGGATCTACAGCCACATGAAATACAGACACATCGTTCCCCCAAGTCAGGCCAGGTTGATGTGGTCCACTaGCTTCAGGACACCTTTGCC +
Preference number: 4 (lower is better)
Translates to: WDLQPHEIQTHRSPKSGQVDVVH*LQDTFA
Trigger: GGCAAAGGTGTCCTGAAGGCAGTGGACCACATCAAC...CTGGCCTGACTTGGGGGAACGATGTGTCTGTATTTCATGTGGCTGTAGATCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR GCA 90 bp CTGACGCTCCCATCACAGATGCTGATCATTCTTCCACGGACCCCCTTTTATAATAAAGTCCTGGTAGAGTaGCCCCAGCTGGTCCCCAGT +
Preference number: 4 (lower is better)
Translates to: LTLPSQMLIILPRTPFYNKVLVE*PQLVPS
Trigger: ACTGGGGACCAGCTGGGGGCACTCTACCAGGACTTT...ATTATAAAAGGGGGTCCGTGGAAGAATGATCAGCATCTGTGATGGGAGCGTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000538763.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR GCA 90 bp TCACAGCACACTGGGATTACGGAAGTTATGTCCGGCAAAGCGAGCTTCATCCCCGGCCTTTTCTTCCACTaGCCGCTCAATACGTTTTGG +
Preference number: 4 (lower is better)
Translates to: SQHTGITEVMSGKASFIPGLFFH*PLNTFW
Trigger: CCAAAACGTATTGAGCGGGCAGTGGAAGAAAAGGCC...GGGGATGAAGCTCGCTTTGCCGGACATAACTTCCGTAATCCCAGTGTGCTGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000535275.5
ENST00000543975.1
CDS-3UTR GCA 90 bp AGGATGAGACAGAGGTTCCACGTCTCCAGGCAAGCAGAGGAATCACAGCACACTGGCCTTTTCTTCCACTaGCCGCTCAATACGTTTTGG +
Preference number: 4 (lower is better)
Translates to: RMRQRFHVSRQAEESQHTGLFFH*PLNTFW
Trigger: CCAAAACGTATTGAGCGGGCAGTGGAAGAAAAGGCC...AGTGTGCTGTGATTCCTCTGCTTGCCTGGAGACGTGGAACCTCTGTCTCATCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543975.1
CDS-3UTR GCA 90 bp CCAACCCTGACGCTCCCATCACAGATGCTGATCATTCTTCCACGGACCCCCTTTTCCATCCCAGCACTATaGACAGTTCACGGCTCATAT +
Preference number: 4 (lower is better)
Translates to: PTLTLPSQMLIILPRTPFSIPAL*TVHGSY
Trigger: ATATGAGCCGTGAACTGTGCATAGTGCTGGGATGGA...AAAGGGGGTCCGTGGAAGAATGATCAGCATCTGTGATGGGAGCGTCAGGGTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR GCA 90 bp GTGCTCATTTCAATGCCACAGAGGTGGTGGCAACTGTGGAACGTGGCATGGGGATCCATCCCAGCACTATaGACAGTTCACGGCTCATAT +
Preference number: 4 (lower is better)
Translates to: VLISMPQRWWQLWNVAWGSIPAL*TVHGSY
Trigger: ATATGAGCCGTGAACTGTGCATAGTGCTGGGATGGA...TCCCCATGCCACGTTCCACAGTTGCCACCACCTCTGTGGCATTGAAATGAGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR GCA 90 bp TTACGGAAGTTATGTCCGGCAAAGCGAGCTTCATCCCCCAGCTCTTCCTCAATTCTCAATGGAGACCACTaGAGAGAGAGCATGGTGGGG +
Preference number: 4 (lower is better)
Translates to: LRKLCPAKRASSPSSSSILNGDH*RESMVG
Trigger: CCCCACCATGCTCTCTCTGCAGTGGTCTCCATTGAG...AATTGAGGAAGAGCTGGGGGATGAAGCTCGCTTTGCCGGACATAACTTCCGTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535275.5
CDS-3UTR CCA 90 bp GAGGTGCTCATTTCAATGCCACAGAGGTGGTGGCAACTGTGGAACGTGGCATGGCCCGGAAAAGACCTTTaGCAGTATAGAGATCCACCT +
Preference number: 4 (lower is better)
Translates to: EVLISMPQRWWQLWNVAWPGKDL*QYRDPP
Trigger: AGGTGGATCTCTATACTGCCAAAGGTCTTTTCCGGG...CCATGCCACGTTCCACAGTTGCCACCACCTCTGTGGCATTGAAATGAGCACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR CCA 90 bp GCACAAGTGACACATGGTCCCTCTCTAACACCTCAGCACACCAACCCTGACGCTCCCGGAAAAGACCTTTaGCAGTATAGAGATCCACCT +
Preference number: 4 (lower is better)
Translates to: AQVTHGPSLTPQHTNPDAPGKDL*QYRDPP
Trigger: AGGTGGATCTCTATACTGCCAAAGGTCTTTTCCGGG...AGCGTCAGGGTTGGTGTGCTGAGGTGTTAGAGAGGGACCATGTGTCACTTGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000538763.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR CCA 90 bp ATGGGGAGTGAGAGGTTGCTCTGGTGCAGCTGGAGGAAGAACAGGGAACCTAGGCATTGGCCCCAAACTTaGATTTGTTCTCAGTCCCAT +
Preference number: 4 (lower is better)
Translates to: MGSERLLWCSWRKNREPRHWPQT*ICSQSH
Trigger: ATGGGACTGAGAACAAATCCAAGTTTGGGGCCAATG...CCTAGGTTCCCTGTTCTTCCTCCAGCTGCACCAGAGCAACCTCTCACTCCCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
CDS-3UTR CCA 90 bp CCTTTCTATGACCCTTCCCATTCTAGCAAGACCTCCCACCCCAGTCATCTTGGGCACCCAGGATGGCATTaGCCCCAAACTTGGATTTGT +
Preference number: 4 (lower is better)
Translates to: PFYDPSHSSKTSHPSHLGHPGWH*PQTWIC
Trigger: ACAAATCCAAGTTTGGGGCCAATGCCATCCTGGGTG...CCCAAGATGACTGGGGTGGGAGGTCTTGCTAGAATGGGAAGGGTCATAGAAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
CDS-3UTR CCA 90 bp AGCACACTGGGATTACGGAAGTTATGTCCGGCAAAGCGAGCTTCATCCCCCAGCTCATCACCCACAATCTaGATCCCTACATTGGCTGTG +
Preference number: 4 (lower is better)
Translates to: STLGLRKLCPAKRASSPSSSPTI*IPTLAV
Trigger: CACAGCCAATGTAGGGATCCAGATTGTGGGTGATGA...GCTGGGGGATGAAGCTCGCTTTGCCGGACATAACTTCCGTAATCCCAGTGTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000535275.5
ENST00000543975.1
CDS-3UTR CCA 90 bp TGGGATTACGGAAGTTATGTCCGGCAAAGCGAGCTTCATCCCCCAGCTCTTCCTCCGCTCAATACGTTTTaGGTTGGTCACTGTCAGGTC +
Preference number: 4 (lower is better)
Translates to: WDYGSYVRQSELHPPALPPLNTF*VGHCQV
Trigger: GACCTGACAGTGACCAACCCAAAACGTATTGAGCGG...AGGAAGAGCTGGGGGATGAAGCTCGCTTTGCCGGACATAACTTCCGTAATCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000535275.5
ENST00000543975.1
CDS-3UTR CCA 90 bp AGAGGAAAACTCCCCCAGGCACACAGCCTCCGCTCTGGACCAACGCAGGCTTCATCAATTCTCATGAGCTaGTTGTATTTAGCCAGACGT +
Preference number: 4 (lower is better)
Translates to: RGKLPQAHSLRSGPTQASSILMS*LYLARR
Trigger: ACGTCTGGCTAAATACAACCAGCTCATGAGAATTGA...TGAAGCCTGCGTTGGTCCAGAGCGGAGGCTGTGTGCCTGGGGGAGTTTTCCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR CCA 90 bp CGAGCAGAGACAGCAAGAGGTCAGGTAAGCCAAGGAGCAGCGGAGCAGGTCAATGGAATCACAGCACACTaGGATTACGGAAGTTATGTC +
Preference number: 4 (lower is better)
Translates to: RAETARGQVSQGAAEQVNGITAH*DYGSYV
Trigger: GACATAACTTCCGTAATCCCAGTGTGCTGTGATTCC...ATTGACCTGCTCCGCTGCTCCTTGGCTTACCTGACCTCTTGCTGTCTCTGCTCG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000538763.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR CCA 90 bp GTGACACATGGTCCCTCTCTAACACCTCAGCACACCAACCCTGACGCTCCCATCGGAATCACAGCACACTaGGATTACGGAAGTTATGTC +
Preference number: 4 (lower is better)
Translates to: VTHGPSLTPQHTNPDAPIGITAH*DYGSYV
Trigger: GACATAACTTCCGTAATCCCAGTGTGCTGTGATTCC...GATGGGAGCGTCAGGGTTGGTGTGCTGAGGTGTTAGAGAGGGACCATGTGTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000538763.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR CCA 90 bp ACAGAAAGGAGGGCGAGCAGAGACAGCAAGAGGTCAGGTAAGCCAAGGAGCAGCAGAGAAAGGAAGAAGTaGAAAGTGCGGAACCCCAAT +
Preference number: 4 (lower is better)
Translates to: TERRASRDSKRSGKPRSSRERKK*KVRNPN
Trigger: ATTGGGGTTCCGCACTTTCCACTTCTTCCTTTCTCT...GCTGCTCCTTGGCTTACCTGACCTCTTGCTGTCTCTGCTCGCCCTCCTTTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000538763.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR CCA 90 bp TGGGATCTACAGCCACATGAAATACAGACACATCGTTCCCCCAAGTCAGGCCAGTTGCTCTGGTGCAGCTaGAGGAAGAACAGGGAACCT +
Preference number: 4 (lower is better)
Translates to: WDLQPHEIQTHRSPKSGQLLWCS*RKNREP
Trigger: AGGTTCCCTGTTCTTCCTCCAGCTGCACCAGAGCAA...CTGGCCTGACTTGGGGGAACGATGTGTCTGTATTTCATGTGGCTGTAGATCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR CCA 90 bp TCACAGCACACTGGGATTACGGAAGTTATGTCCGGCAAAGCGAGCTTCATCCCCCAAATGGGTCCTCAATaGAGACCACTGCAGAGAGAG +
Preference number: 4 (lower is better)
Translates to: SQHTGITEVMSGKASFIPQMGPQ*RPLQRE
Trigger: CTCTCTCTGCAGTGGTCTCCATTGAGGACCCATTTG...GGGGATGAAGCTCGCTTTGCCGGACATAACTTCCGTAATCCCAGTGTGCTGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535275.5
CDS-3UTR TCA 90 bp ACTGGGATTACGGAAGTTATGTCCGGCAAAGCGAGCTTCATCCCCCAGCTCTTCATCACGATAAAACTCTaGGGCAGCAACATCCATGCC +
Preference number: 4 (lower is better)
Translates to: TGITEVMSGKASFIPQLFITIKL*GSNIHA
Trigger: GGCATGGATGTTGCTGCCTCAGAGTTTTATCGTGAT...GAAGAGCTGGGGGATGAAGCTCGCTTTGCCGGACATAACTTCCGTAATCCCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535275.5
CDS-3UTR TCA 90 bp CCAACCCTGACGCTCCCATCACAGATGCTGATCATTCTTCCACGGACCCCCTTTGATCAGTGGGAGACTTaGAGTCCAAGTCATATTTGC +
Preference number: 4 (lower is better)
Translates to: PTLTLPSQMLIILPRTPFDQWET*SPSHIC
Trigger: GCAAATATGACTTGGACTTCAAGTCTCCCACTGATC...AAAGGGGGTCCGTGGAAGAATGATCAGCATCTGTGATGGGAGCGTCAGGGTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000538763.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR TCA 90 bp GCACAAGTGACACATGGTCCCTCTCTAACACCTCAGCACACCAACCCTGACGCTGATCAGTGGGAGACTTaGAGTCCAAGTCATATTTGC +
Preference number: 4 (lower is better)
Translates to: AQVTHGPSLTPQHTNPDADQWET*SPSHIC
Trigger: GCAAATATGACTTGGACTTCAAGTCTCCCACTGATC...AGCGTCAGGGTTGGTGTGCTGAGGTGTTAGAGAGGGACCATGTGTCACTTGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000538763.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR TCA 90 bp CCAGGCACACAGCCTCCGCTCTGGACCAACGCAGGCTTCAGTGAGTACACACAACACATTTCTAGTTTCTaGGGGAAGAGAGAAAGAGAA +
Preference number: 4 (lower is better)
Translates to: PGTQPPLWTNAGFSEYTQHISSF*GKRERE
Trigger: TTCTCTTTCTCTCTTCCCTCAGAAACTAGAAATGTG...TTGTGTGTACTCACTGAAGCCTGCGTTGGTCCAGAGCGGAGGCTGTGTGCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR TCA 90 bp CAAGGTTCCAGGAGGATGAGACAGAGGTTCCACGTCTCCAGGCAAGCAGAGGAAGGATCTACAGCCACATaGAATACAGACACATCGTTC +
Preference number: 4 (lower is better)
Translates to: QGSRRMRQRFHVSRQAEEGSTAT*NTDTSF
Trigger: GAACGATGTGTCTGTATTTCATGTGGCTGTAGATCC...TTCCTCTGCTTGCCTGGAGACGTGGAACCTCTGTCTCATCCTCCTGGAACCTTG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR TCA 90 bp ACAGAAAGGAGGGCGAGCAGAGACAGCAAGAGGTCAGGTAAGCCAAGGAGCAGCTACACACAAAGGAACTaGTGTCAAGGCCCTTTCTAT +
Preference number: 4 (lower is better)
Translates to: TERRASRDSKRSGKPRSSYTQRN*CQGPFY
Trigger: ATAGAAAGGGCCTTGACATCAGTTCCTTTGTGTGTA...GCTGCTCCTTGGCTTACCTGACCTCTTGCTGTCTCTGCTCGCCCTCCTTTCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR TCA 90 bp GAATCACAGCACACTGGGATTACGGAAGTTATGTCCGGCAAAGCGAGCTTCATCTCCCAGGATAGTCCCTaGCAAAGTCCTGGTAGAGTG +
Preference number: 4 (lower is better)
Translates to: ESQHTGITEVMSGKASFISQDSP*QSPGRV
Trigger: CACTCTACCAGGACTTTGTCAGGGACTATCCTGGGA...GATGAAGCTCGCTTTGCCGGACATAACTTCCGTAATCCCAGTGTGCTGTGATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535275.5
CDS-3UTR GCA 90 bp ATCTACAGCCACATGAAATACAGACACATCGTTCCCCCAAGTCAGGCCAGTTTTGGCTCCACTGGGCACTaGAGCCCGGAAAAGACCTTT +
Preference number: 4 (lower is better)
Translates to: IYSHMKYRHIVPPSQASFGSTGH*SPEKTF
Trigger: AAAGGTCTTTTCCGGGCTGCAGTGCCCAGTGGAGCC...AAAACTGGCCTGACTTGGGGGAACGATGTGTCTGTATTTCATGTGGCTGTAGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR GCA 90 bp CTAACACCTCAGCACACCAACCCTGACGCTCCCATCACAGATGCTGATCATTCTAGGTGCTCATTTCAATaGCACAGAGGTGGTGGCAAC +
Preference number: 4 (lower is better)
Translates to: LTPQHTNPDAPITDADHSRCSFQ*HRGGGN
Trigger: GTTGCCACCACCTCTGTGGCATTGAAATGAGCACCT...AGAATGATCAGCATCTGTGATGGGAGCGTCAGGGTTGGTGTGCTGAGGTGTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR GCA 90 bp ACCCTGACGCTCCCATCACAGATGCTGATCATTCTTCCACGGACCCCCTTTTATAGGTGCTCATTTCAATaGCACAGAGGTGGTGGCAAC +
Preference number: 4 (lower is better)
Translates to: TLTLPSQMLIILPRTPFYRCSFQ*HRGGGN
Trigger: GTTGCCACCACCTCTGTGGCATTGAAATGAGCACCT...ATAAAAGGGGGTCCGTGGAAGAATGATCAGCATCTGTGATGGGAGCGTCAGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR GCA 90 bp TGGGATTACGGAAGTTATGTCCGGCAAAGCGAGCTTCATCCCCCAGCTCTTCCTCATCAGGCAGGAACATaGCCCTTTATTCCCAGGATA +
Preference number: 4 (lower is better)
Translates to: WDYGSYVRQSELHPPALPHQAGT*PFIPRI
Trigger: TATCCTGGGAATAAAGGGGCATGTTCCTGCCTGATG...AGGAAGAGCTGGGGGATGAAGCTCGCTTTGCCGGACATAACTTCCGTAATCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535275.5
CDS-3UTR CCA 90 bp TGGGATCTACAGCCACATGAAATACAGACACATCGTTCCCCCAAGTCAGGCCAGCACCCAGGATGGCATTaGCCCCAAACTTGGATTTGT +
Preference number: 4 (lower is better)
Translates to: WDLQPHEIQTHRSPKSGQHPGWH*PQTWIC
Trigger: ACAAATCCAAGTTTGGGGCCAATGCCATCCTGGGTG...CTGGCCTGACTTGGGGGAACGATGTGTCTGTATTTCATGTGGCTGTAGATCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
CDS-3UTR CCA 90 bp AAAGGAGGGCGAGCAGAGACAGCAAGAGGTCAGGTAAGCCAAGGAGCAGCGGAGTCAATTCTCATGAGCTaGTTGTATTTAGCCAGACGT +
Preference number: 4 (lower is better)
Translates to: KGGRAETARGQVSQGAAESILMS*LYLARR
Trigger: ACGTCTGGCTAAATACAACCAGCTCATGAGAATTGA...CTCCGCTGCTCCTTGGCTTACCTGACCTCTTGCTGTCTCTGCTCGCCCTCCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000538763.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR CCA 90 bp ACGCTCCCATCACAGATGCTGATCATTCTTCCACGGACCCCCTTTTATAATAATCAATCAGGGAAGTTCTaGGCACCCTGGGGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: TLPSQMLIILPRTPFYNNQSGKF*APWGSG
Trigger: CCCTGAGCCCCAGGGTGCCCAGAACTTCCCTGATTG...ATTATTATAAAAGGGGGTCCGTGGAAGAATGATCAGCATCTGTGATGGGAGCGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000538763.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR CCA 90 bp GAGGTGCTCATTTCAATGCCACAGAGGTGGTGGCAACTGTGGAACGTGGCATGGAGAGAAAGGAAGAAGTaGAAAGTGCGGAACCCCAAT +
Preference number: 4 (lower is better)
Translates to: EVLISMPQRWWQLWNVAWRERKK*KVRNPN
Trigger: ATTGGGGTTCCGCACTTTCCACTTCTTCCTTTCTCT...CCATGCCACGTTCCACAGTTGCCACCACCTCTGTGGCATTGAAATGAGCACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR CCA 90 bp GCACAAGTGACACATGGTCCCTCTCTAACACCTCAGCACACCAACCCTGACGCTAGAGAAAGGAAGAAGTaGAAAGTGCGGAACCCCAAT +
Preference number: 4 (lower is better)
Translates to: AQVTHGPSLTPQHTNPDARERKK*KVRNPN
Trigger: ATTGGGGTTCCGCACTTTCCACTTCTTCCTTTCTCT...AGCGTCAGGGTTGGTGTGCTGAGGTGTTAGAGAGGGACCATGTGTCACTTGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000538763.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR CCA 90 bp GACTTTAATGGAGGTGCTCATTTCAATGCCACAGAGGTGGTGGCAACTGTGGAACTCCTCAGAGCGGAATaGCTGCCAGGCTTGCATTTC +
Preference number: 4 (lower is better)
Translates to: DFNGGAHFNATEVVATVELLRAE*LPGLHF
Trigger: GAAATGCAAGCCTGGCAGCCATTCCGCTCTGAGGAG...TTCCACAGTTGCCACCACCTCTGTGGCATTGAAATGAGCACCTCCATTAAAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535366.5
CDS-3UTR TCA 90 bp ACGCTCCCATCACAGATGCTGATCATTCTTCCACGGACCCCCTTTTATAATAATGCGCGATGGTGGAGTTaGTGTGGTCCACTGCCTTCA +
Preference number: 4 (lower is better)
Translates to: TLPSQMLIILPRTPFYNNARWWS*CGPLPS
Trigger: TGAAGGCAGTGGACCACATCAACTCCACCATCGCGC...ATTATTATAAAAGGGGGTCCGTGGAAGAATGATCAGCATCTGTGATGGGAGCGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR TCA 90 bp GCCTTATTAGCCAGGCGTGATCACATGCCCAACACTCCCCTCCATCCCAGCACTCACATTTCTAGTTTCTaGGGGAAGAGAGAAAGAGAA +
Preference number: 4 (lower is better)
Translates to: ALLARRDHMPNTPLHPSTHISSF*GKRERE
Trigger: TTCTCTTTCTCTCTTCCCTCAGAAACTAGAAATGTG...AGTGCTGGGATGGAGGGGAGTGTTGGGCATGTGATCACGCCTGGCTAATAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR TCA 90 bp CGAGCAGAGACAGCAAGAGGTCAGGTAAGCCAAGGAGCAGCGGAGCAGGTCAATCACATTTCTAGTTTCTaGGGGAAGAGAGAAAGAGAA +
Preference number: 4 (lower is better)
Translates to: RAETARGQVSQGAAEQVNHISSF*GKRERE
Trigger: TTCTCTTTCTCTCTTCCCTCAGAAACTAGAAATGTG...ATTGACCTGCTCCGCTGCTCCTTGGCTTACCTGACCTCTTGCTGTCTCTGCTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000538763.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR TCA 90 bp GCACAAGTGACACATGGTCCCTCTCTAACACCTCAGCACACCAACCCTGACGCTTACACACAAAGGAACTaGTGTCAAGGCCCTTTCTAT +
Preference number: 4 (lower is better)
Translates to: AQVTHGPSLTPQHTNPDAYTQRN*CQGPFY
Trigger: ATAGAAAGGGCCTTGACATCAGTTCCTTTGTGTGTA...AGCGTCAGGGTTGGTGTGCTGAGGTGTTAGAGAGGGACCATGTGTCACTTGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR GCA 90 bp CTGACGCTCCCATCACAGATGCTGATCATTCTTCCACGGACCCCCTTTTATAATAATGGCTGCCAGGCTTaGATTTCTCCTGGGAGCCAA +
Preference number: 4 (lower is better)
Translates to: LTLPSQMLIILPRTPFYNNGCQA*ISPGSQ
Trigger: TTGGCTCCCAGGAGAAATGCAAGCCTGGCAGCCATT...ATTATAAAAGGGGGTCCGTGGAAGAATGATCAGCATCTGTGATGGGAGCGTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535366.5
CDS-3UTR CCA 90 bp CTTGGGATCTACAGCCACATGAAATACAGACACATCGTTCCCCCAAGTCAGGCCTCATCACCCACAATCTaGATCCCTACATTGGCTGTG +
Preference number: 4 (lower is better)
Translates to: LGIYSHMKYRHIVPPSQASSPTI*IPTLAV
Trigger: CACAGCCAATGTAGGGATCCAGATTGTGGGTGATGA...GGCCTGACTTGGGGGAACGATGTGTCTGTATTTCATGTGGCTGTAGATCCCAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR CCA 90 bp CGAGCAGAGACAGCAAGAGGTCAGGTAAGCCAAGGAGCAGCGGAGCAGGTCAATTCAATTCTCATGAGCTaGTTGTATTTAGCCAGACGT +
Preference number: 4 (lower is better)
Translates to: RAETARGQVSQGAAEQVNSILMS*LYLARR
Trigger: ACGTCTGGCTAAATACAACCAGCTCATGAGAATTGA...ATTGACCTGCTCCGCTGCTCCTTGGCTTACCTGACCTCTTGCTGTCTCTGCTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000538763.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR CCA 90 bp GGATTACGGAAGTTATGTCCGGCAAAGCGAGCTTCATCCCCCAGCTCTTCCTCAGGAATCACAGCACACTaGGATTACGGAAGTTATGTC +
Preference number: 4 (lower is better)
Translates to: GLRKLCPAKRASSPSSSSGITAH*DYGSYV
Trigger: GACATAACTTCCGTAATCCCAGTGTGCTGTGATTCC...TGAGGAAGAGCTGGGGGATGAAGCTCGCTTTGCCGGACATAACTTCCGTAATCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000535275.5
ENST00000543975.1
CDS-3UTR CCA 90 bp ACTGGGATTACGGAAGTTATGTCCGGCAAAGCGAGCTTCATCCCCCAGCTCTTCGGAATCACAGCACACTaGGATTACGGAAGTTATGTC +
Preference number: 4 (lower is better)
Translates to: TGITEVMSGKASFIPQLFGITAH*DYGSYV
Trigger: GACATAACTTCCGTAATCCCAGTGTGCTGTGATTCC...GAAGAGCTGGGGGATGAAGCTCGCTTTGCCGGACATAACTTCCGTAATCCCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000535275.5
ENST00000543975.1
CDS-3UTR CCA 90 bp TGGGATCTACAGCCACATGAAATACAGACACATCGTTCCCCCAAGTCAGGCCAGGGCTCATATGCAAAGTaGAAGACACGTGGGACAAGA +
Preference number: 4 (lower is better)
Translates to: WDLQPHEIQTHRSPKSGQGSYAK*KTRGTR
Trigger: TCTTGTCCCACGTGTCTTCCACTTTGCATATGAGCC...CTGGCCTGACTTGGGGGAACGATGTGTCTGTATTTCATGTGGCTGTAGATCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR CCA 90 bp ATCTACAGCCACATGAAATACAGACACATCGTTCCCCCAAGTCAGGCCAGTTTTCTGTGGAACGTGGCATaGGGAGTGAGAGGTTGCTCT +
Preference number: 4 (lower is better)
Translates to: IYSHMKYRHIVPPSQASFLWNVA*GVRGCS
Trigger: AGAGCAACCTCTCACTCCCCATGCCACGTTCCACAG...AAAACTGGCCTGACTTGGGGGAACGATGTGTCTGTATTTCATGTGGCTGTAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR TCA 90 bp CTTGGGATCTACAGCCACATGAAATACAGACACATCGTTCCCCCAAGTCAGGCCGATCAGTGGGAGACTTaGAGTCCAAGTCATATTTGC +
Preference number: 4 (lower is better)
Translates to: LGIYSHMKYRHIVPPSQADQWET*SPSHIC
Trigger: GCAAATATGACTTGGACTTCAAGTCTCCCACTGATC...GGCCTGACTTGGGGGAACGATGTGTCTGTATTTCATGTGGCTGTAGATCCCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR TCA 90 bp ACGCTCCCATCACAGATGCTGATCATTCTTCCACGGACCCCCTTTTATAATAATGTCCTCAGTCTCTCCTaGGCGATGACTCACCATGAC +
Preference number: 4 (lower is better)
Translates to: TLPSQMLIILPRTPFYNNVLSLS*AMTHHD
Trigger: GTCATGGTGAGTCATCGCTCAGGAGAGACTGAGGAC...ATTATTATAAAAGGGGGTCCGTGGAAGAATGATCAGCATCTGTGATGGGAGCGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000538763.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR TCA 90 bp ATCTACAGCCACATGAAATACAGACACATCGTTCCCCCAAGTCAGGCCAGTTTTAAGGTTCCAGGAGGATaGGACAGAGGTTCCACGTCT +
Preference number: 4 (lower is better)
Translates to: IYSHMKYRHIVPPSQASFKVPGG*DRGSTS
Trigger: AGACGTGGAACCTCTGTCTCATCCTCCTGGAACCTT...AAAACTGGCCTGACTTGGGGGAACGATGTGTCTGTATTTCATGTGGCTGTAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR TCA 90 bp CCAACCCTGACGCTCCCATCACAGATGCTGATCATTCTTCCACGGACCCCCTTTCACATTTCTAGTTTCTaGGGGAAGAGAGAAAGAGAA +
Preference number: 4 (lower is better)
Translates to: PTLTLPSQMLIILPRTPFHISSF*GKRERE
Trigger: TTCTCTTTCTCTCTTCCCTCAGAAACTAGAAATGTG...AAAGGGGGTCCGTGGAAGAATGATCAGCATCTGTGATGGGAGCGTCAGGGTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000538763.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR TCA 90 bp CTGACGCTCCCATCACAGATGCTGATCATTCTTCCACGGACCCCCTTTTATAATCAACGCAGGCTTCAGTaGGTACACACAAAGGAACTG +
Preference number: 4 (lower is better)
Translates to: LTLPSQMLIILPRTPFYNQRRLQ*VHTKEL
Trigger: CAGTTCCTTTGTGTGTACTCACTGAAGCCTGCGTTG...ATTATAAAAGGGGGTCCGTGGAAGAATGATCAGCATCTGTGATGGGAGCGTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR GCA 90 bp ATCTACAGCCACATGAAATACAGACACATCGTTCCCCCAAGTCAGGCCAGTTTTGTTGATGTGGTCCACTaGCTTCAGGACACCTTTGCC +
Preference number: 4 (lower is better)
Translates to: IYSHMKYRHIVPPSQASFVDVVH*LQDTFA
Trigger: GGCAAAGGTGTCCTGAAGGCAGTGGACCACATCAAC...AAAACTGGCCTGACTTGGGGGAACGATGTGTCTGTATTTCATGTGGCTGTAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR GCA 90 bp AGAGGTCAGGTAAGCCAAGGAGCAGCGGAGCAGGTCAATCAGGGAAGTTCTGGGAGTCCAAGTCATATTTaGCATCACGATAAAACTCTG +
Preference number: 4 (lower is better)
Translates to: RGQVSQGAAEQVNQGSSGSPSHI*HHDKTL
Trigger: CAGAGTTTTATCGTGATGGCAAATATGACTTGGACT...CCCAGAACTTCCCTGATTGACCTGCTCCGCTGCTCCTTGGCTTACCTGACCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000538763.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR GCA 90 bp GATCTACAGCCACATGAAATACAGACACATCGTTCCCCCAAGTCAGGCCAGTTTGGCCTTTTCTTCCACTaGCCGCTCAATACGTTTTGG +
Preference number: 4 (lower is better)
Translates to: DLQPHEIQTHRSPKSGQFGLFFH*PLNTFW
Trigger: CCAAAACGTATTGAGCGGGCAGTGGAAGAAAAGGCC...AAACTGGCCTGACTTGGGGGAACGATGTGTCTGTATTTCATGTGGCTGTAGATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR GCA 90 bp GATCTACAGCCACATGAAATACAGACACATCGTTCCCCCAAGTCAGGCCAGTTTAGGTGCTCATTTCAATaGCACAGAGGTGGTGGCAAC +
Preference number: 4 (lower is better)
Translates to: DLQPHEIQTHRSPKSGQFRCSFQ*HRGGGN
Trigger: GTTGCCACCACCTCTGTGGCATTGAAATGAGCACCT...AAACTGGCCTGACTTGGGGGAACGATGTGTCTGTATTTCATGTGGCTGTAGATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR CCA 90 bp ATCTACAGCCACATGAAATACAGACACATCGTTCCCCCAAGTCAGGCCAGTTTTTATGGACATGATGGCTaGGATCTCGGGACTGCAGAC +
Preference number: 4 (lower is better)
Translates to: IYSHMKYRHIVPPSQASFYGHDG*DLGTAD
Trigger: GTCTGCAGTCCCGAGATCCCAGCCATCATGTCCATA...AAAACTGGCCTGACTTGGGGGAACGATGTGTCTGTATTTCATGTGGCTGTAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000229277.6
CDS-3UTR CCA 90 bp CTGACGCTCCCATCACAGATGCTGATCATTCTTCCACGGACCCCCTTTTATAATCAAATGGGTCCTCAATaGAGACCACAGGATAGTCCC +
Preference number: 4 (lower is better)
Translates to: LTLPSQMLIILPRTPFYNQMGPQ*RPQDSP
Trigger: GGGACTATCCTGTGGTCTCCATTGAGGACCCATTTG...ATTATAAAAGGGGGTCCGTGGAAGAATGATCAGCATCTGTGATGGGAGCGTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000538763.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR CCA 90 bp AGAGGAATCACAGCACACTGGGATTACGGAAGTTATGTCCGGCAAAGCGAGCTTTCATCACCCACAATCTaGATCCCTACATTGGCTGTG +
Preference number: 4 (lower is better)
Translates to: RGITAHWDYGSYVRQSELSSPTI*IPTLAV
Trigger: CACAGCCAATGTAGGGATCCAGATTGTGGGTGATGA...AAGCTCGCTTTGCCGGACATAACTTCCGTAATCCCAGTGTGCTGTGATTCCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535275.5
ENST00000543975.1
CDS-3UTR CCA 90 bp GATCTACAGCCACATGAAATACAGACACATCGTTCCCCCAAGTCAGGCCAGTTTCCGCTCAATACGTTTTaGGTTGGTCACTGTCAGGTC +
Preference number: 4 (lower is better)
Translates to: DLQPHEIQTHRSPKSGQFPLNTF*VGHCQV
Trigger: GACCTGACAGTGACCAACCCAAAACGTATTGAGCGG...AAACTGGCCTGACTTGGGGGAACGATGTGTCTGTATTTCATGTGGCTGTAGATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR CCA 90 bp GACTTTAATGGAGGTGCTCATTTCAATGCCACAGAGGTGGTGGCAACTGTGGAACCGCTCAATACGTTTTaGGTTGGTCACTGTCAGGTC +
Preference number: 4 (lower is better)
Translates to: DFNGGAHFNATEVVATVEPLNTF*VGHCQV
Trigger: GACCTGACAGTGACCAACCCAAAACGTATTGAGCGG...TTCCACAGTTGCCACCACCTCTGTGGCATTGAAATGAGCACCTCCATTAAAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR CCA 90 bp CTGACGCTCCCATCACAGATGCTGATCATTCTTCCACGGACCCCCTTTTATAATCCGCTCAATACGTTTTaGGTTGGTCACTGTCAGGTC +
Preference number: 4 (lower is better)
Translates to: LTLPSQMLIILPRTPFYNPLNTF*VGHCQV
Trigger: GACCTGACAGTGACCAACCCAAAACGTATTGAGCGG...ATTATAAAAGGGGGTCCGTGGAAGAATGATCAGCATCTGTGATGGGAGCGTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000538763.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR CCA 90 bp CCATCACAGATGCTGATCATTCTTCCACGGACCCCCTTTTATAATAATCCTCATGCCAGCTTGCACGCTTaGATGGCTTCAGTGACCGAG +
Preference number: 4 (lower is better)
Translates to: PSQMLIILPRTPFYNNPHASLHA*MASVTE
Trigger: CTCGGTCACTGAAGCCATCCAAGCGTGCAAGCTGGC...ATGAGGATTATTATAAAAGGGGGTCCGTGGAAGAATGATCAGCATCTGTGATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000538763.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR CCA 90 bp GCACAAGTGACACATGGTCCCTCTCTAACACCTCAGCACACCAACCCTGACGCTTCAATTCTCATGAGCTaGTTGTATTTAGCCAGACGT +
Preference number: 4 (lower is better)
Translates to: AQVTHGPSLTPQHTNPDASILMS*LYLARR
Trigger: ACGTCTGGCTAAATACAACCAGCTCATGAGAATTGA...AGCGTCAGGGTTGGTGTGCTGAGGTGTTAGAGAGGGACCATGTGTCACTTGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000538763.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR CCA 90 bp GACTTTAATGGAGGTGCTCATTTCAATGCCACAGAGGTGGTGGCAACTGTGGAACCACCCCAGTCATCTTaGGATCTACAGCCACATGAA +
Preference number: 4 (lower is better)
Translates to: DFNGGAHFNATEVVATVEPPQSS*DLQPHE
Trigger: TTCATGTGGCTGTAGATCCCAAGATGACTGGGGTGG...TTCCACAGTTGCCACCACCTCTGTGGCATTGAAATGAGCACCTCCATTAAAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR CCA 90 bp CCATCACAGATGCTGATCATTCTTCCACGGACCCCCTTTTATAATAATCCTCATACACAGCCTCCGCTCTaGACCAACGCAGGCTTCAGT +
Preference number: 4 (lower is better)
Translates to: PSQMLIILPRTPFYNNPHTQPPL*TNAGFS
Trigger: ACTGAAGCCTGCGTTGGTCCAGAGCGGAGGCTGTGT...ATGAGGATTATTATAAAAGGGGGTCCGTGGAAGAATGATCAGCATCTGTGATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR CCA 90 bp CTTGGGATCTACAGCCACATGAAATACAGACACATCGTTCCCCCAAGTCAGGCCGATCAAATGATGAGATaGGAGAACACTGCAGTGAGG +
Preference number: 4 (lower is better)
Translates to: LGIYSHMKYRHIVPPSQADQMMR*ENTAVR
Trigger: CCTCACTGCAGTGTTCTCCCATCTCATCATTTGATC...GGCCTGACTTGGGGGAACGATGTGTCTGTATTTCATGTGGCTGTAGATCCCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535366.5
CDS-3UTR TCA 90 bp GGAATCACAGCACACTGGGATTACGGAAGTTATGTCCGGCAAAGCGAGCTTCATGATCAGTGGGAGACTTaGAGTCCAAGTCATATTTGC +
Preference number: 4 (lower is better)
Translates to: GITAHWDYGSYVRQSELHDQWET*SPSHIC
Trigger: GCAAATATGACTTGGACTTCAAGTCTCCCACTGATC...ATGAAGCTCGCTTTGCCGGACATAACTTCCGTAATCCCAGTGTGCTGTGATTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535275.5
CDS-3UTR TCA 90 bp TGGGATCTACAGCCACATGAAATACAGACACATCGTTCCCCCAAGTCAGGCCAGTACACACAAAGGAACTaGTGTCAAGGCCCTTTCTAT +
Preference number: 4 (lower is better)
Translates to: WDLQPHEIQTHRSPKSGQYTQRN*CQGPFY
Trigger: ATAGAAAGGGCCTTGACATCAGTTCCTTTGTGTGTA...CTGGCCTGACTTGGGGGAACGATGTGTCTGTATTTCATGTGGCTGTAGATCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR GCA 90 bp CTCATTTCAATGCCACAGAGGTGGTGGCAACTGTGGAACGTGGCATGGGGAGTGAGTCCAAGTCATATTTaGCATCACGATAAAACTCTG +
Preference number: 4 (lower is better)
Translates to: LISMPQRWWQLWNVAWGVSPSHI*HHDKTL
Trigger: CAGAGTTTTATCGTGATGGCAAATATGACTTGGACT...CACTCCCCATGCCACGTTCCACAGTTGCCACCACCTCTGTGGCATTGAAATGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR GCA 90 bp GACTTTAATGGAGGTGCTCATTTCAATGCCACAGAGGTGGTGGCAACTGTGGAATCCATCCCAGCACTATaGACAGTTCACGGCTCATAT +
Preference number: 4 (lower is better)
Translates to: DFNGGAHFNATEVVATVESIPAL*TVHGSY
Trigger: ATATGAGCCGTGAACTGTGCATAGTGCTGGGATGGA...TTCCACAGTTGCCACCACCTCTGTGGCATTGAAATGAGCACCTCCATTAAAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR CCA 90 bp CCATCACAGATGCTGATCATTCTTCCACGGACCCCCTTTTATAATAATCCTCATCTGCACCTAGTCGCATaGCATCCCGAAAGCTCTCAG +
Preference number: 4 (lower is better)
Translates to: PSQMLIILPRTPFYNNPHLHLVA*HPESSQ
Trigger: CTGAGAGCTTTCGGGATGCCATGCGACTAGGTGCAG...ATGAGGATTATTATAAAAGGGGGTCCGTGGAAGAATGATCAGCATCTGTGATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000538763.5
ENST00000541477.5
CDS-3UTR CCA 90 bp ATCTACAGCCACATGAAATACAGACACATCGTTCCCCCAAGTCAGGCCAGTTTTCAAATGGGTCCTCAATaGAGACCACAGGATAGTCCC +
Preference number: 4 (lower is better)
Translates to: IYSHMKYRHIVPPSQASFQMGPQ*RPQDSP
Trigger: GGGACTATCCTGTGGTCTCCATTGAGGACCCATTTG...AAAACTGGCCTGACTTGGGGGAACGATGTGTCTGTATTTCATGTGGCTGTAGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR CCA 90 bp TGGGATTACGGAAGTTATGTCCGGCAAAGCGAGCTTCATCCCCCAGCTCTTCCTTCAATTCTCATGAGCTaGTTGTATTTAGCCAGACGT +
Preference number: 4 (lower is better)
Translates to: WDYGSYVRQSELHPPALPSILMS*LYLARR
Trigger: ACGTCTGGCTAAATACAACCAGCTCATGAGAATTGA...AGGAAGAGCTGGGGGATGAAGCTCGCTTTGCCGGACATAACTTCCGTAATCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000535275.5
ENST00000543975.1
CDS-3UTR TCA 90 bp CCATCACAGATGCTGATCATTCTTCCACGGACCCCCTTTTATAATAATCCTCATAAGGTTCCAGGAGGATaGGACAGAGGTTCCACGTCT +
Preference number: 4 (lower is better)
Translates to: PSQMLIILPRTPFYNNPHKVPGG*DRGSTS
Trigger: AGACGTGGAACCTCTGTCTCATCCTCCTGGAACCTT...ATGAGGATTATTATAAAAGGGGGTCCGTGGAAGAATGATCAGCATCTGTGATGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000538763.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR GCA 90 bp ACGCTCCCATCACAGATGCTGATCATTCTTCCACGGACCCCCTTTTATAATAATGGCCTTTTCTTCCACTaGCCGCTCAATACGTTTTGG +
Preference number: 4 (lower is better)
Translates to: TLPSQMLIILPRTPFYNNGLFFH*PLNTFW
Trigger: CCAAAACGTATTGAGCGGGCAGTGGAAGAAAAGGCC...ATTATTATAAAAGGGGGTCCGTGGAAGAATGATCAGCATCTGTGATGGGAGCGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000538763.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR CCA 90 bp GACTTTAATGGAGGTGCTCATTTCAATGCCACAGAGGTGGTGGCAACTGTGGAACATTGGCCCCAAACTTaGATTTGTTCTCAGTCCCAT +
Preference number: 4 (lower is better)
Translates to: DFNGGAHFNATEVVATVEHWPQT*ICSQSH
Trigger: ATGGGACTGAGAACAAATCCAAGTTTGGGGCCAATG...TTCCACAGTTGCCACCACCTCTGTGGCATTGAAATGAGCACCTCCATTAAAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
CDS-3UTR CCA 90 bp ATCTACAGCCACATGAAATACAGACACATCGTTCCCCCAAGTCAGGCCAGTTTTTCATCACCCACAATCTaGATCCCTACATTGGCTGTG +
Preference number: 4 (lower is better)
Translates to: IYSHMKYRHIVPPSQASFSSPTI*IPTLAV
Trigger: CACAGCCAATGTAGGGATCCAGATTGTGGGTGATGA...AAAACTGGCCTGACTTGGGGGAACGATGTGTCTGTATTTCATGTGGCTGTAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR CCA 90 bp CTTGGGATCTACAGCCACATGAAATACAGACACATCGTTCCCCCAAGTCAGGCCTCAATTCTCATGAGCTaGTTGTATTTAGCCAGACGT +
Preference number: 4 (lower is better)
Translates to: LGIYSHMKYRHIVPPSQASILMS*LYLARR
Trigger: ACGTCTGGCTAAATACAACCAGCTCATGAGAATTGA...GGCCTGACTTGGGGGAACGATGTGTCTGTATTTCATGTGGCTGTAGATCCCAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR TCA 90 bp GATCTACAGCCACATGAAATACAGACACATCGTTCCCCCAAGTCAGGCCAGTTTTACACACAAAGGAACTaGTGTCAAGGCCCTTTCTAT +
Preference number: 4 (lower is better)
Translates to: DLQPHEIQTHRSPKSGQFYTQRN*CQGPFY
Trigger: ATAGAAAGGGCCTTGACATCAGTTCCTTTGTGTGTA...AAACTGGCCTGACTTGGGGGAACGATGTGTCTGTATTTCATGTGGCTGTAGATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR CCA 90 bp ATCTACAGCCACATGAAATACAGACACATCGTTCCCCCAAGTCAGGCCAGTTTTCATTGGCCCCAAACTTaGATTTGTTCTCAGTCCCAT +
Preference number: 4 (lower is better)
Translates to: IYSHMKYRHIVPPSQASFHWPQT*ICSQSH
Trigger: ATGGGACTGAGAACAAATCCAAGTTTGGGGCCAATG...AAAACTGGCCTGACTTGGGGGAACGATGTGTCTGTATTTCATGTGGCTGTAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
CDS-3UTR CCA 90 bp ACGCTCCCATCACAGATGCTGATCATTCTTCCACGGACCCCCTTTTATAATAATTCATCACCCACAATCTaGATCCCTACATTGGCTGTG +
Preference number: 4 (lower is better)
Translates to: TLPSQMLIILPRTPFYNNSSPTI*IPTLAV
Trigger: CACAGCCAATGTAGGGATCCAGATTGTGGGTGATGA...ATTATTATAAAAGGGGGTCCGTGGAAGAATGATCAGCATCTGTGATGGGAGCGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000538763.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR CCA 90 bp GGAATCACAGCACACTGGGATTACGGAAGTTATGTCCGGCAAAGCGAGCTTCATTCAATTCTCATGAGCTaGTTGTATTTAGCCAGACGT +
Preference number: 4 (lower is better)
Translates to: GITAHWDYGSYVRQSELHSILMS*LYLARR
Trigger: ACGTCTGGCTAAATACAACCAGCTCATGAGAATTGA...ATGAAGCTCGCTTTGCCGGACATAACTTCCGTAATCCCAGTGTGCTGTGATTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535275.5
ENST00000543975.1
CDS-3UTR TCA 90 bp CTGACGCTCCCATCACAGATGCTGATCATTCTTCCACGGACCCCCTTTTATAATCACATTTCTAGTTTCTaGGGGAAGAGAGAAAGAGAA +
Preference number: 4 (lower is better)
Translates to: LTLPSQMLIILPRTPFYNHISSF*GKRERE
Trigger: TTCTCTTTCTCTCTTCCCTCAGAAACTAGAAATGTG...ATTATAAAAGGGGGTCCGTGGAAGAATGATCAGCATCTGTGATGGGAGCGTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000538763.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR GCA 90 bp AGGAATCACAGCACACTGGGATTACGGAAGTTATGTCCGGCAAAGCGAGCTTCAAGTCCAAGTCATATTTaGCATCACGATAAAACTCTG +
Preference number: 4 (lower is better)
Translates to: RNHSTLGLRKLCPAKRASSPSHI*HHDKTL
Trigger: CAGAGTTTTATCGTGATGGCAAATATGACTTGGACT...TGAAGCTCGCTTTGCCGGACATAACTTCCGTAATCCCAGTGTGCTGTGATTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535275.5
CDS-3UTR CCA 90 bp CCATCACAGATGCTGATCATTCTTCCACGGACCCCCTTTTATAATAATCCTCATTCATCACCCACAATCTaGATCCCTACATTGGCTGTG +
Preference number: 4 (lower is better)
Translates to: PSQMLIILPRTPFYNNPHSSPTI*IPTLAV
Trigger: CACAGCCAATGTAGGGATCCAGATTGTGGGTGATGA...ATGAGGATTATTATAAAAGGGGGTCCGTGGAAGAATGATCAGCATCTGTGATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000538763.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR CCA 90 bp ACGCTCCCATCACAGATGCTGATCATTCTTCCACGGACCCCCTTTTATAATAATGGAATCACAGCACACTaGGATTACGGAAGTTATGTC +
Preference number: 4 (lower is better)
Translates to: TLPSQMLIILPRTPFYNNGITAH*DYGSYV
Trigger: GACATAACTTCCGTAATCCCAGTGTGCTGTGATTCC...ATTATTATAAAAGGGGGTCCGTGGAAGAATGATCAGCATCTGTGATGGGAGCGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000538763.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR CCA 90 bp CCATCACAGATGCTGATCATTCTTCCACGGACCCCCTTTTATAATAATCCTCATGGCTCATATGCAAAGTaGAAGACACGTGGGACAAGA +
Preference number: 4 (lower is better)
Translates to: PSQMLIILPRTPFYNNPHGSYAK*KTRGTR
Trigger: TCTTGTCCCACGTGTCTTCCACTTTGCATATGAGCC...ATGAGGATTATTATAAAAGGGGGTCCGTGGAAGAATGATCAGCATCTGTGATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR TCA 90 bp CCATCACAGATGCTGATCATTCTTCCACGGACCCCCTTTTATAATAATCCTCATGGATCTACAGCCACATaGAATACAGACACATCGTTC +
Preference number: 4 (lower is better)
Translates to: PSQMLIILPRTPFYNNPHGSTAT*NTDTSF
Trigger: GAACGATGTGTCTGTATTTCATGTGGCTGTAGATCC...ATGAGGATTATTATAAAAGGGGGTCCGTGGAAGAATGATCAGCATCTGTGATGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR GCA 90 bp ATCTACAGCCACATGAAATACAGACACATCGTTCCCCCAAGTCAGGCCAGTTTTAGTCCAAGTCATATTTaGCATCACGATAAAACTCTG +
Preference number: 4 (lower is better)
Translates to: IYSHMKYRHIVPPSQASFSPSHI*HHDKTL
Trigger: CAGAGTTTTATCGTGATGGCAAATATGACTTGGACT...AAAACTGGCCTGACTTGGGGGAACGATGTGTCTGTATTTCATGTGGCTGTAGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR GCA 90 bp ACGCTCCCATCACAGATGCTGATCATTCTTCCACGGACCCCCTTTTATAATAATAGTCCAAGTCATATTTaGCATCACGATAAAACTCTG +
Preference number: 4 (lower is better)
Translates to: TLPSQMLIILPRTPFYNNSPSHI*HHDKTL
Trigger: CAGAGTTTTATCGTGATGGCAAATATGACTTGGACT...ATTATTATAAAAGGGGGTCCGTGGAAGAATGATCAGCATCTGTGATGGGAGCGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000538763.5
ENST00000541477.5
ENST00000545045.6
CDS TCA 90 bp GGCGCCTATAGGGCCGCGCGGGCGCATGTGACCCGGAGCCCCCGATaGGTCAGGAGCTGCCGGCGGAGGCGCACGTACGAGCGCGGGTGG +
Preference number: 5 (lower is better)
Translates to: GAYRAARAHVTRSPR*VRSCRRRRTYERGW
Trigger: CCACCCGCGCTCGTACGTGCGCCTCCGCCGGCAGCTCCTGACTCATCGGGGGCTCCGGGTCACATGCGCCCGCGCGGCCCTATAGGCGCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000541477.5
CDS CCA 90 bp GGCACGACAGTGGTTCCCGCGCCTCTTTGCAGCTTGGCCAGCCGGTaGGGTTCCCCCAGATCTCCTCAGAGCGGAATGGCTGCCAGGCTT +
Preference number: 5 (lower is better)
Translates to: GTTVVPAPLCSLASR*GSPRSPQSGMAARL
Trigger: AAGCCTGGCAGCCATTCCGCTCTGAGGAGATCTGGGGGAACCCCACCGGCTGGCCAAGCTGCAAAGAGGCGCGGGAACCACTGTCGTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000535366.5
ENST00000536199.5
CDS-3UTR CAA 90 bp GGAGCAGCGGAGCAGGTCAATCAGGGAAGTTCTGGGCACCCTGGGGCTCAGGGGCCACCATTGATCACGTaGAAGGCCGGCACAGGCAGG +
Preference number: 5 (lower is better)
Translates to: GAAEQVNQGSSGHPGAQGPPLIT*KAGTGR
Trigger: CCTGCCTGTGCCGGCCTTCAACGTGATCAATGGTGG...CCCCTGAGCCCCAGGGTGCCCAGAACTTCCCTGATTGACCTGCTCCGCTGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000538763.5
ENST00000541477.5
CDS GCA 90 bp GGCCAGCCGGTGGGGTTCCCCCAGATCTCCTCAGAGCGGAATGGCTaGCAGGCTTGCATTTCTCCTGGGAGCCAAGAAGAGGATGGGCTG +
Preference number: 5 (lower is better)
Translates to: GQPVGFPQISSERNG*QACISPGSQEEDGL
Trigger: CAGCCCATCCTCTTCTTGGCTCCCAGGAGAAATGCAAGCCTGGCAGCCATTCCGCTCTGAGGAGATCTGGGGGAACCCCACCGGCTGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535366.5
CDS-3UTR CAA 90 bp GAGGAAAACTCCCCCAGGCACACAGCCTCCGCTCTGGACCAACGCAGGCTTCAGCACGGGGCACCAGTCTaGATCTGGCCTGTGCACAGC +
Preference number: 5 (lower is better)
Translates to: EENSPRHTASALDQRRLQHGAPV*IWPVHS
Trigger: GCTGTGCACAGGCCAGATCAAGACTGGTGCCCCGTG...CTGAAGCCTGCGTTGGTCCAGAGCGGAGGCTGTGTGCCTGGGGGAGTTTTCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS TCA 90 bp TCCCGCGAAAGGCGCATGCAATACAGGTGTCGGGGAAGAGGGTCCTaGGAAAGGCCCTGCAGTCCCTGGGGGTTGCAGCGGGAAGTGAAG +
Preference number: 5 (lower is better)
Translates to: SRERRMQYRCRGRGS*ERPCSPWGLQREVK
Trigger: CTTCACTTCCCGCTGCAACCCCCAGGGACTGCAGGGCCTTTCTCAGGACCCTCTTCCCCGACACCTGTATTGCATGCGCCTTTCGCGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535366.5
CDS CCA 90 bp GCTTGGCCAGCCGGTGGGGTTCCCCCAGATCTCCTCAGAGCGGAATaGCTGCCAGGCTTGCATTTCTCCTGGGAGCCAAGAAGAGGATGG +
Preference number: 5 (lower is better)
Translates to: AWPAGGVPPDLLRAE*LPGLHFSWEPRRGW
Trigger: CCATCCTCTTCTTGGCTCCCAGGAGAAATGCAAGCCTGGCAGCCATTCCGCTCTGAGGAGATCTGGGGGAACCCCACCGGCTGGCCAAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535366.5
CDS-3UTR CAA 90 bp CAAGGAGCAGCGGAGCAGGTCAATCAGGGAAGTTCTGGGCACCCTGGGGCTCAGCCACCATTGATCACGTaGAAGGCCGGCACAGGCAGG +
Preference number: 5 (lower is better)
Translates to: QGAAEQVNQGSSGHPGAQPPLIT*KAGTGR
Trigger: CCTGCCTGTGCCGGCCTTCAACGTGATCAATGGTGG...CTGAGCCCCAGGGTGCCCAGAACTTCCCTGATTGACCTGCTCCGCTGCTCCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000538763.5
ENST00000541477.5
CDS-3UTR CAA 90 bp ATGGGGAGTGAGAGGTTGCTCTGGTGCAGCTGGAGGAAGAACAGGGAACCTAGGGGTTCCCGCGCCTCTTaGCAGCTTGGCCAGCCGGTG +
Preference number: 5 (lower is better)
Translates to: MGSERLLWCSWRKNREPRGSRAS*QLGQPV
Trigger: CACCGGCTGGCCAAGCTGCAAAGAGGCGCGGGAACC...CCTAGGTTCCCTGTTCTTCCTCCAGCTGCACCAGAGCAACCTCTCACTCCCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535366.5
CDS GCA 90 bp ATTCCTGAGGAAGCCACTACAGCACTGGCCCTTCAGCTCTCTATCTaGTCCACGCCTCCCCACCCTGACGCTTCCCCACTTTCTCCCGGC +
Preference number: 5 (lower is better)
Translates to: IPEEATTALALQLSI*STPPHPDASPLSPG
Trigger: GCCGGGAGAAAGTGGGGAAGCGTCAGGGTGGGGAGGCGTGGAGCAGATAGAGAGCTGAAGGGCCAGTGCTGTAGTGGCTTCCTCAGGAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539713.5
CDS-3UTR CAA 90 bp GGAGCAGCGGAGCAGGTCAATCAGGGAAGTTCTGGGCACCCTGGGGCTCAGGGGCCCGCTCAATACGTTTaGGGTTGGTCACTGTCAGGT +
Preference number: 5 (lower is better)
Translates to: GAAEQVNQGSSGHPGAQGPAQYV*GWSLSG
Trigger: ACCTGACAGTGACCAACCCAAAACGTATTGAGCGGG...CCCCTGAGCCCCAGGGTGCCCAGAACTTCCCTGATTGACCTGCTCCGCTGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000538763.5
ENST00000541477.5
ENST00000545045.6
CDS GCA 90 bp GCTGCCAGGCTTGCATTTCTCCTGGGAGCCAAGAAGAGGATGGGCTaGCTGGGCCTCTCTTCCAGAGCCCCCATACCTCCCCAACTTAAC +
Preference number: 5 (lower is better)
Translates to: AARLAFLLGAKKRMG*LGLSSRAPIPPQLN
Trigger: GTTAAGTTGGGGAGGTATGGGGGCTCTGGAAGAGAGGCCCAGGCAGCCCATCCTCTTCTTGGCTCCCAGGAGAAATGCAAGCCTGGCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535366.5
CDS CCA 90 bp AGCCCTAAGGCAGAGGGTCCCCTCATTCACACCCAAGCTCACATTTaGCCAGGGTCCAACCAGGTCCCTGTGACAGGGGCCTACCTGGAT +
Preference number: 5 (lower is better)
Translates to: SPKAEGPLIHTQAHI*PGSNQVPVTGAYLD
Trigger: ATCCAGGTAGGCCCCTGTCACAGGGACCTGGTTGGACCCTGGCCAAATGTGAGCTTGGGTGTGAATGAGGGGACCCTCTGCCTTAGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542509.1
CDS-3UTR CAA 90 bp AAAGGAGGGCGAGCAGAGACAGCAAGAGGTCAGGTAAGCCAAGGAGCAGCGGAGCCACCATTGATCACGTaGAAGGCCGGCACAGGCAGG +
Preference number: 5 (lower is better)
Translates to: KGGRAETARGQVSQGAAEPPLIT*KAGTGR
Trigger: CCTGCCTGTGCCGGCCTTCAACGTGATCAATGGTGG...CTCCGCTGCTCCTTGGCTTACCTGACCTCTTGCTGTCTCTGCTCGCCCTCCTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000538763.5
ENST00000541477.5
CDS-3UTR CAA 90 bp ACAGAAAGGAGGGCGAGCAGAGACAGCAAGAGGTCAGGTAAGCCAAGGAGCAGCCACGGGGCACCAGTCTaGATCTGGCCTGTGCACAGC +
Preference number: 5 (lower is better)
Translates to: TERRASRDSKRSGKPRSSHGAPV*IWPVHS
Trigger: GCTGTGCACAGGCCAGATCAAGACTGGTGCCCCGTG...GCTGCTCCTTGGCTTACCTGACCTCTTGCTGTCTCTGCTCGCCCTCCTTTCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000538763.5
ENST00000541477.5
ENST00000545045.6
CDS TCA 90 bp TTCACACCCAAGCTCACATTTGGCCAGGGTCCAACCAGGTCCCTGTaGCAGGGGCCTACCTGGATTAGGGGACCTGAACTCCCATGGGAG +
Preference number: 5 (lower is better)
Translates to: FTPKLTFGQGPTRSL*QGPTWIRGPELPWE
Trigger: CTCCCATGGGAGTTCAGGTCCCCTAATCCAGGTAGGCCCCTGTCACAGGGACCTGGTTGGACCCTGGCCAAATGTGAGCTTGGGTGTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542509.1
CDS-3UTR CAA 90 bp GTGACACATGGTCCCTCTCTAACACCTCAGCACACCAACCCTGACGCTCCCATCGGCCAGCTTGCACGCTaGGATGGCTTCAGTGACCGA +
Preference number: 5 (lower is better)
Translates to: VTHGPSLTPQHTNPDAPIGQLAR*DGFSDR
Trigger: TCGGTCACTGAAGCCATCCAAGCGTGCAAGCTGGCC...GATGGGAGCGTCAGGGTTGGTGTGCTGAGGTGTTAGAGAGGGACCATGTGTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000538763.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR CAA 90 bp CCAACCCTGACGCTCCCATCACAGATGCTGATCATTCTTCCACGGACCCCCTTTCACGGGGCACCAGTCTaGATCTGGCCTGTGCACAGC +
Preference number: 5 (lower is better)
Translates to: PTLTLPSQMLIILPRTPFHGAPV*IWPVHS
Trigger: GCTGTGCACAGGCCAGATCAAGACTGGTGCCCCGTG...AAAGGGGGTCCGTGGAAGAATGATCAGCATCTGTGATGGGAGCGTCAGGGTTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000538763.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR CAA 90 bp GAGGTGCTCATTTCAATGCCACAGAGGTGGTGGCAACTGTGGAACGTGGCATGGCACGGGGCACCAGTCTaGATCTGGCCTGTGCACAGC +
Preference number: 5 (lower is better)
Translates to: EVLISMPQRWWQLWNVAWHGAPV*IWPVHS
Trigger: GCTGTGCACAGGCCAGATCAAGACTGGTGCCCCGTG...CCATGCCACGTTCCACAGTTGCCACCACCTCTGTGGCATTGAAATGAGCACCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS GCA 90 bp ACTCTCTCCCAAACGTGTATCCCTCCTCTTCCCGCGAAAGGCGCATaGAATACAGGTGTCGGGGAAGAGGGTCCTGAGAAAGGCCCTGCA +
Preference number: 5 (lower is better)
Translates to: TLSQTCIPPLPAKGA*NTGVGEEGPEKGPA
Trigger: TGCAGGGCCTTTCTCAGGACCCTCTTCCCCGACACCTGTATTGCATGCGCCTTTCGCGGGAAGAGGAGGGATACACGTTTGGGAGAGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535366.5
CDS-3UTR CAA 90 bp AGCACACTGGGATTACGGAAGTTATGTCCGGCAAAGCGAGCTTCATCCCCCAGCGGCCAGCTTGCACGCTaGGATGGCTTCAGTGACCGA +
Preference number: 5 (lower is better)
Translates to: STLGLRKLCPAKRASSPSGQLAR*DGFSDR
Trigger: TCGGTCACTGAAGCCATCCAAGCGTGCAAGCTGGCC...GCTGGGGGATGAAGCTCGCTTTGCCGGACATAACTTCCGTAATCCCAGTGTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535275.5
CDS-3UTR CAA 90 bp GCTCAGGGGATCTCAGGGGGTGAACTATCACAGATCAGGACAGCAAGGTTCCAGGGCCAGCTTGCACGCTaGGATGGCTTCAGTGACCGA +
Preference number: 5 (lower is better)
Translates to: AQGISGGELSQIRTARFQGQLAR*DGFSDR
Trigger: TCGGTCACTGAAGCCATCCAAGCGTGCAAGCTGGCC...CTGGAACCTTGCTGTCCTGATCTGTGATAGTTCACCCCCTGAGATCCCCTGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000538763.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR CAA 90 bp GCACAAGTGACACATGGTCCCTCTCTAACACCTCAGCACACCAACCCTGACGCTGGCCAGCTTGCACGCTaGGATGGCTTCAGTGACCGA +
Preference number: 5 (lower is better)
Translates to: AQVTHGPSLTPQHTNPDAGQLAR*DGFSDR
Trigger: TCGGTCACTGAAGCCATCCAAGCGTGCAAGCTGGCC...AGCGTCAGGGTTGGTGTGCTGAGGTGTTAGAGAGGGACCATGTGTCACTTGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000538763.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR CAA 90 bp AAAGGAGGGCGAGCAGAGACAGCAAGAGGTCAGGTAAGCCAAGGAGCAGCGGAGGTTGTCCAGTTTCTCTaGCTCCACCACAGAGAGACC +
Preference number: 5 (lower is better)
Translates to: KGGRAETARGQVSQGAAEVVQFL*LHHRET
Trigger: GGTCTCTCTGTGGTGGAGCAAGAGAAACTGGACAAC...CTCCGCTGCTCCTTGGCTTACCTGACCTCTTGCTGTCTCTGCTCGCCCTCCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR CAA 90 bp AGAGGAAAACTCCCCCAGGCACACAGCCTCCGCTCTGGACCAACGCAGGCTTCAGCCCCAAACTTGGATTaGTTCTCAGTCCCATCCAAC +
Preference number: 5 (lower is better)
Translates to: RGKLPQAHSLRSGPTQASAPNLD*FSVPSN
Trigger: GTTGGATGGGACTGAGAACAAATCCAAGTTTGGGGC...TGAAGCCTGCGTTGGTCCAGAGCGGAGGCTGTGTGCCTGGGGGAGTTTTCCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
CDS-3UTR CAA 90 bp CTTGGGATCTACAGCCACATGAAATACAGACACATCGTTCCCCCAAGTCAGGCCCACGGGGCACCAGTCTaGATCTGGCCTGTGCACAGC +
Preference number: 5 (lower is better)
Translates to: LGIYSHMKYRHIVPPSQAHGAPV*IWPVHS
Trigger: GCTGTGCACAGGCCAGATCAAGACTGGTGCCCCGTG...GGCCTGACTTGGGGGAACGATGTGTCTGTATTTCATGTGGCTGTAGATCCCAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR CAA 90 bp ATAGAGGAAAACTCCCCCAGGCACACAGCCTCCGCTCTGGACCAACGCAGGCTTGCCCCAAACTTGGATTaGTTCTCAGTCCCATCCAAC +
Preference number: 5 (lower is better)
Translates to: IEENSPRHTASALDQRRLAPNLD*FSVPSN
Trigger: GTTGGATGGGACTGAGAACAAATCCAAGTTTGGGGC...AAGCCTGCGTTGGTCCAGAGCGGAGGCTGTGTGCCTGGGGGAGTTTTCCTCTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
CDS-3UTR CAA 90 bp CTAACACCTCAGCACACCAACCCTGACGCTCCCATCACAGATGCTGATCATTCTCCACCATTGATCACGTaGAAGGCCGGCACAGGCAGG +
Preference number: 5 (lower is better)
Translates to: LTPQHTNPDAPITDADHSPPLIT*KAGTGR
Trigger: CCTGCCTGTGCCGGCCTTCAACGTGATCAATGGTGG...AGAATGATCAGCATCTGTGATGGGAGCGTCAGGGTTGGTGTGCTGAGGTGTTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000538763.5
ENST00000541477.5
CDS-3UTR CAA 90 bp ATAGAGGAAAACTCCCCCAGGCACACAGCCTCCGCTCTGGACCAACGCAGGCTTGCATCCTTGCCGTATTaGTCCTTGATGACTCCCTTG +
Preference number: 5 (lower is better)
Translates to: IEENSPRHTASALDQRRLASLPY*SLMTPL
Trigger: CAAGGGAGTCATCAAGGACAAATACGGCAAGGATGC...AAGCCTGCGTTGGTCCAGAGCGGAGGCTGTGTGCCTGGGGGAGTTTTCCTCTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
CDS-3UTR CAA 90 bp AAAGGAGGGCGAGCAGAGACAGCAAGAGGTCAGGTAAGCCAAGGAGCAGCGGAGGCATCCTTGCCGTATTaGTCCTTGATGACTCCCTTG +
Preference number: 5 (lower is better)
Translates to: KGGRAETARGQVSQGAAEASLPY*SLMTPL
Trigger: CAAGGGAGTCATCAAGGACAAATACGGCAAGGATGC...CTCCGCTGCTCCTTGGCTTACCTGACCTCTTGCTGTCTCTGCTCGCCCTCCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000538763.5
ENST00000541477.5
CDS-3UTR CAA 90 bp ATAGAGGAAAACTCCCCCAGGCACACAGCCTCCGCTCTGGACCAACGCAGGCTTATCTGGATCCCTACATaGGCTGTGAACTTGGACCAG +
Preference number: 5 (lower is better)
Translates to: IEENSPRHTASALDQRRLIWIPT*AVNLDQ
Trigger: CTGGTCCAAGTTCACAGCCAATGTAGGGATCCAGAT...AAGCCTGCGTTGGTCCAGAGCGGAGGCTGTGTGCCTGGGGGAGTTTTCCTCTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR CAA 90 bp GCCTTATTAGCCAGGCGTGATCACATGCCCAACACTCCCCTCCATCCCAGCACTCCCGCTCAATACGTTTaGGGTTGGTCACTGTCAGGT +
Preference number: 5 (lower is better)
Translates to: ALLARRDHMPNTPLHPSTPAQYV*GWSLSG
Trigger: ACCTGACAGTGACCAACCCAAAACGTATTGAGCGGG...AGTGCTGGGATGGAGGGGAGTGTTGGGCATGTGATCACGCCTGGCTAATAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR CAA 90 bp GGAATCACAGCACACTGGGATTACGGAAGTTATGTCCGGCAAAGCGAGCTTCATCACGGGGCACCAGTCTaGATCTGGCCTGTGCACAGC +
Preference number: 5 (lower is better)
Translates to: GITAHWDYGSYVRQSELHHGAPV*IWPVHS
Trigger: GCTGTGCACAGGCCAGATCAAGACTGGTGCCCCGTG...ATGAAGCTCGCTTTGCCGGACATAACTTCCGTAATCCCAGTGTGCTGTGATTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535275.5
CDS-3UTR CAA 90 bp GAGGTGCTCATTTCAATGCCACAGAGGTGGTGGCAACTGTGGAACGTGGCATGGGTTGTCCAGTTTCTCTaGCTCCACCACAGAGAGACC +
Preference number: 5 (lower is better)
Translates to: EVLISMPQRWWQLWNVAWVVQFL*LHHRET
Trigger: GGTCTCTCTGTGGTGGAGCAAGAGAAACTGGACAAC...CCATGCCACGTTCCACAGTTGCCACCACCTCTGTGGCATTGAAATGAGCACCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR CAA 90 bp CTCATTTCAATGCCACAGAGGTGGTGGCAACTGTGGAACGTGGCATGGGGAGTGGTTGTCCAGTTTCTCTaGCTCCACCACAGAGAGACC +
Preference number: 5 (lower is better)
Translates to: LISMPQRWWQLWNVAWGVVVQFL*LHHRET
Trigger: GGTCTCTCTGTGGTGGAGCAAGAGAAACTGGACAAC...CACTCCCCATGCCACGTTCCACAGTTGCCACCACCTCTGTGGCATTGAAATGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR CAA 90 bp TGGAACGTGGCATGGGGAGTGAGAGGTTGCTCTGGTGCAGCTGGAGGAAGAACAAACTCCAGCATCAGGTaGTCCAGTTTCTCTTGCTCC +
Preference number: 5 (lower is better)
Translates to: WNVAWGVRGCSGAAGGRTNSSIR*SSFSCS
Trigger: GGAGCAAGAGAAACTGGACAACCTGATGCTGGAGTT...TGTTCTTCCTCCAGCTGCACCAGAGCAACCTCTCACTCCCCATGCCACGTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR CAA 90 bp ATGGGGAGTGAGAGGTTGCTCTGGTGCAGCTGGAGGAAGAACAGGGAACCTAGGATCTGGATCCCTACATaGGCTGTGAACTTGGACCAG +
Preference number: 5 (lower is better)
Translates to: MGSERLLWCSWRKNREPRIWIPT*AVNLDQ
Trigger: CTGGTCCAAGTTCACAGCCAATGTAGGGATCCAGAT...CCTAGGTTCCCTGTTCTTCCTCCAGCTGCACCAGAGCAACCTCTCACTCCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR CAA 90 bp CCAACCCTGACGCTCCCATCACAGATGCTGATCATTCTTCCACGGACCCCCTTTCCCGCTCAATACGTTTaGGGTTGGTCACTGTCAGGT +
Preference number: 5 (lower is better)
Translates to: PTLTLPSQMLIILPRTPFPAQYV*GWSLSG
Trigger: ACCTGACAGTGACCAACCCAAAACGTATTGAGCGGG...AAAGGGGGTCCGTGGAAGAATGATCAGCATCTGTGATGGGAGCGTCAGGGTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000538763.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR CAA 90 bp CAGCACACTGGGATTACGGAAGTTATGTCCGGCAAAGCGAGCTTCATCCCCCAGCCCGCTCAATACGTTTaGGGTTGGTCACTGTCAGGT +
Preference number: 5 (lower is better)
Translates to: QHTGITEVMSGKASFIPQPAQYV*GWSLSG
Trigger: ACCTGACAGTGACCAACCCAAAACGTATTGAGCGGG...CTGGGGGATGAAGCTCGCTTTGCCGGACATAACTTCCGTAATCCCAGTGTGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000535275.5
ENST00000543975.1
CDS-3UTR CAA 90 bp GAGGTGCTCATTTCAATGCCACAGAGGTGGTGGCAACTGTGGAACGTGGCATGGGCCCCAAACTTGGATTaGTTCTCAGTCCCATCCAAC +
Preference number: 5 (lower is better)
Translates to: EVLISMPQRWWQLWNVAWAPNLD*FSVPSN
Trigger: GTTGGATGGGACTGAGAACAAATCCAAGTTTGGGGC...CCATGCCACGTTCCACAGTTGCCACCACCTCTGTGGCATTGAAATGAGCACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
CDS-3UTR CAA 90 bp AAAGGAGGGCGAGCAGAGACAGCAAGAGGTCAGGTAAGCCAAGGAGCAGCGGAGTTGCCGTATTTGTCCTaGATGACTCCCTTGAGTGTA +
Preference number: 5 (lower is better)
Translates to: KGGRAETARGQVSQGAAELPYLS*MTPLSV
Trigger: TACACTCAAGGGAGTCATCAAGGACAAATACGGCAA...CTCCGCTGCTCCTTGGCTTACCTGACCTCTTGCTGTCTCTGCTCGCCCTCCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000538763.5
ENST00000541477.5
CDS-3UTR CAA 90 bp CCAGGCACACAGCCTCCGCTCTGGACCAACGCAGGCTTCAGTGAGTACACACAATTGCCGTATTTGTCCTaGATGACTCCCTTGAGTGTA +
Preference number: 5 (lower is better)
Translates to: PGTQPPLWTNAGFSEYTQLPYLS*MTPLSV
Trigger: TACACTCAAGGGAGTCATCAAGGACAAATACGGCAA...TTGTGTGTACTCACTGAAGCCTGCGTTGGTCCAGAGCGGAGGCTGTGTGCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
CDS-3UTR CAA 90 bp CCTTTCTATGACCCTTCCCATTCTAGCAAGACCTCCCACCCCAGTCATCTTGGGCCCGCTCAATACGTTTaGGGTTGGTCACTGTCAGGT +
Preference number: 5 (lower is better)
Translates to: PFYDPSHSSKTSHPSHLGPAQYV*GWSLSG
Trigger: ACCTGACAGTGACCAACCCAAAACGTATTGAGCGGG...CCCAAGATGACTGGGGTGGGAGGTCTTGCTAGAATGGGAAGGGTCATAGAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR CAA 90 bp GACTTTAATGGAGGTGCTCATTTCAATGCCACAGAGGTGGTGGCAACTGTGGAAGGCCAGCTTGCACGCTaGGATGGCTTCAGTGACCGA +
Preference number: 5 (lower is better)
Translates to: DFNGGAHFNATEVVATVEGQLAR*DGFSDR
Trigger: TCGGTCACTGAAGCCATCCAAGCGTGCAAGCTGGCC...TTCCACAGTTGCCACCACCTCTGTGGCATTGAAATGAGCACCTCCATTAAAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR CAA 90 bp AGAGGAATCACAGCACACTGGGATTACGGAAGTTATGTCCGGCAAAGCGAGCTTCACGGGGCACCAGTCTaGATGCTTGGATGGCTTCAG +
Preference number: 5 (lower is better)
Translates to: RGITAHWDYGSYVRQSELHGAPV*MLGWLQ
Trigger: CTGAAGCCATCCAAGCATCAAGACTGGTGCCCCGTG...AAGCTCGCTTTGCCGGACATAACTTCCGTAATCCCAGTGTGCTGTGATTCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543975.1
CDS TCA 90 bp TGGCATTGGCCCCAAACTTGGCTAGGAGATTATAGAGGAAGGTGCTaGGCACAATGTCCCCTTCTCCTTTCTAGCTCCTGCCTCCATCTG +
Preference number: 5 (lower is better)
Translates to: WHWPQTWLGDYRGRC*AQCPLLLSSSCLHL
Trigger: CAGATGGAGGCAGGAGCTAGAAAGGAGAAGGGGACATTGTGCTCAGCACCTTCCTCTATAATCTCCTAGCCAAGTTTGGGGCCAATGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441285.2
CDS-3UTR CAA 90 bp CGAGCAGAGACAGCAAGAGGTCAGGTAAGCCAAGGAGCAGCGGAGCAGGTCAATTTGCCGTATTTGTCCTaGATGACTCCCTTGAGTGTA +
Preference number: 5 (lower is better)
Translates to: RAETARGQVSQGAAEQVNLPYLS*MTPLSV
Trigger: TACACTCAAGGGAGTCATCAAGGACAAATACGGCAA...ATTGACCTGCTCCGCTGCTCCTTGGCTTACCTGACCTCTTGCTGTCTCTGCTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000538763.5
ENST00000541477.5
CDS-3UTR CAA 90 bp CACTGGGATTACGGAAGTTATGTCCGGCAAAGCGAGCTTCATCCCCCAGCTCTTATCTGGATCCCTACATaGGCTGTGAACTTGGACCAG +
Preference number: 5 (lower is better)
Translates to: HWDYGSYVRQSELHPPALIWIPT*AVNLDQ
Trigger: CTGGTCCAAGTTCACAGCCAATGTAGGGATCCAGAT...AAGAGCTGGGGGATGAAGCTCGCTTTGCCGGACATAACTTCCGTAATCCCAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000535275.5
ENST00000543975.1
CDS-3UTR CAA 90 bp AAAGGAGGGCGAGCAGAGACAGCAAGAGGTCAGGTAAGCCAAGGAGCAGCGGAGATTCTCATGAGCTGGTaGTATTTAGCCAGACGTTCA +
Preference number: 5 (lower is better)
Translates to: KGGRAETARGQVSQGAAEILMSW*YLARRS
Trigger: TGAACGTCTGGCTAAATACAACCAGCTCATGAGAAT...CTCCGCTGCTCCTTGGCTTACCTGACCTCTTGCTGTCTCTGCTCGCCCTCCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000538763.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR CAA 90 bp CCTTTCTATGACCCTTCCCATTCTAGCAAGACCTCCCACCCCAGTCATCTTGGGACCAGCTCCAAGGATTaGTTCTCAGTCCCATCCAAC +
Preference number: 5 (lower is better)
Translates to: PFYDPSHSSKTSHPSHLGTSSKD*FSVPSN
Trigger: GTTGGATGGGACTGAGAACAAATCCTTGGAGCTGGT...CCCAAGATGACTGGGGTGGGAGGTCTTGCTAGAATGGGAAGGGTCATAGAAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545045.6
CDS-3UTR CAA 90 bp ACCCTGACGCTCCCATCACAGATGCTGATCATTCTTCCACGGACCCCCTTTTATGCATTGGCCCCAAACTaGGATTTGTTCTCAGTCCCA +
Preference number: 5 (lower is better)
Translates to: TLTLPSQMLIILPRTPFYALAPN*DLFSVP
Trigger: TGGGACTGAGAACAAATCCAAGTTTGGGGCCAATGC...ATAAAAGGGGGTCCGTGGAAGAATGATCAGCATCTGTGATGGGAGCGTCAGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
CDS-3UTR CAA 90 bp ACCCTGACGCTCCCATCACAGATGCTGATCATTCTTCCACGGACCCCCTTTTATATCTGGATCCCTACATaGGCTGTGAACTTGGACCAG +
Preference number: 5 (lower is better)
Translates to: TLTLPSQMLIILPRTPFYIWIPT*AVNLDQ
Trigger: CTGGTCCAAGTTCACAGCCAATGTAGGGATCCAGAT...ATAAAAGGGGGTCCGTGGAAGAATGATCAGCATCTGTGATGGGAGCGTCAGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000538763.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR CAA 90 bp AGGAATCACAGCACACTGGGATTACGGAAGTTATGTCCGGCAAAGCGAGCTTCACCCGCTCAATACGTTTaGGGTTGGTCACTGTCAGGT +
Preference number: 5 (lower is better)
Translates to: RNHSTLGLRKLCPAKRASPAQYV*GWSLSG
Trigger: ACCTGACAGTGACCAACCCAAAACGTATTGAGCGGG...TGAAGCTCGCTTTGCCGGACATAACTTCCGTAATCCCAGTGTGCTGTGATTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535275.5
ENST00000543975.1
CDS-3UTR CAA 90 bp ACGCTCCCATCACAGATGCTGATCATTCTTCCACGGACCCCCTTTTATAATAATGGCCAGCTTGCACGCTaGGATGGCTTCAGTGACCGA +
Preference number: 5 (lower is better)
Translates to: TLPSQMLIILPRTPFYNNGQLAR*DGFSDR
Trigger: TCGGTCACTGAAGCCATCCAAGCGTGCAAGCTGGCC...ATTATTATAAAAGGGGGTCCGTGGAAGAATGATCAGCATCTGTGATGGGAGCGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000538763.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR CAA 90 bp GTGACACATGGTCCCTCTCTAACACCTCAGCACACCAACCCTGACGCTCCCATCATTCTCATGAGCTGGTaGTATTTAGCCAGACGTTCA +
Preference number: 5 (lower is better)
Translates to: VTHGPSLTPQHTNPDAPIILMSW*YLARRS
Trigger: TGAACGTCTGGCTAAATACAACCAGCTCATGAGAAT...GATGGGAGCGTCAGGGTTGGTGTGCTGAGGTGTTAGAGAGGGACCATGTGTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000538763.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR CAA 90 bp CGAGCAGAGACAGCAAGAGGTCAGGTAAGCCAAGGAGCAGCGGAGCAGGTCAATATTCTCATGAGCTGGTaGTATTTAGCCAGACGTTCA +
Preference number: 5 (lower is better)
Translates to: RAETARGQVSQGAAEQVNILMSW*YLARRS
Trigger: TGAACGTCTGGCTAAATACAACCAGCTCATGAGAAT...ATTGACCTGCTCCGCTGCTCCTTGGCTTACCTGACCTCTTGCTGTCTCTGCTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000538763.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR CAA 90 bp GATCTACAGCCACATGAAATACAGACACATCGTTCCCCCAAGTCAGGCCAGTTTGTTGTCCAGTTTCTCTaGCTCCACCACAGAGAGACC +
Preference number: 5 (lower is better)
Translates to: DLQPHEIQTHRSPKSGQFVVQFL*LHHRET
Trigger: GGTCTCTCTGTGGTGGAGCAAGAGAAACTGGACAAC...AAACTGGCCTGACTTGGGGGAACGATGTGTCTGTATTTCATGTGGCTGTAGATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR CAA 90 bp AGAGGAATCACAGCACACTGGGATTACGGAAGTTATGTCCGGCAAAGCGAGCTTATCTGGATCCCTACATaGGCTGTGAACTTGGACCAG +
Preference number: 5 (lower is better)
Translates to: RGITAHWDYGSYVRQSELIWIPT*AVNLDQ
Trigger: CTGGTCCAAGTTCACAGCCAATGTAGGGATCCAGAT...AAGCTCGCTTTGCCGGACATAACTTCCGTAATCCCAGTGTGCTGTGATTCCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535275.5
ENST00000543975.1
CDS-3UTR CAA 90 bp GATCTACAGCCACATGAAATACAGACACATCGTTCCCCCAAGTCAGGCCAGTTTCCCGCTCAATACGTTTaGGGTTGGTCACTGTCAGGT +
Preference number: 5 (lower is better)
Translates to: DLQPHEIQTHRSPKSGQFPAQYV*GWSLSG
Trigger: ACCTGACAGTGACCAACCCAAAACGTATTGAGCGGG...AAACTGGCCTGACTTGGGGGAACGATGTGTCTGTATTTCATGTGGCTGTAGATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR CAA 90 bp CAGCACACTGGGATTACGGAAGTTATGTCCGGCAAAGCGAGCTTCATCCCCCAGATTCTCATGAGCTGGTaGTATTTAGCCAGACGTTCA +
Preference number: 5 (lower is better)
Translates to: QHTGITEVMSGKASFIPQILMSW*YLARRS
Trigger: TGAACGTCTGGCTAAATACAACCAGCTCATGAGAAT...CTGGGGGATGAAGCTCGCTTTGCCGGACATAACTTCCGTAATCCCAGTGTGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000535275.5
ENST00000543975.1
CDS-3UTR CAA 90 bp GCACAAGTGACACATGGTCCCTCTCTAACACCTCAGCACACCAACCCTGACGCTGCCAGTTTTAGGCCATaGAGTTATGGGGAAATGATT +
Preference number: 5 (lower is better)
Translates to: AQVTHGPSLTPQHTNPDAASFRP*SYGEMI
Trigger: AATCATTTCCCCATAACTCAATGGCCTAAAACTGGC...AGCGTCAGGGTTGGTGTGCTGAGGTGTTAGAGAGGGACCATGTGTCACTTGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR CAA 90 bp GCTCAGGGGATCTCAGGGGGTGAACTATCACAGATCAGGACAGCAAGGTTCCAGGCCAGTTTTAGGCCATaGAGTTATGGGGAAATGATT +
Preference number: 5 (lower is better)
Translates to: AQGISGGELSQIRTARFQASFRP*SYGEMI
Trigger: AATCATTTCCCCATAACTCAATGGCCTAAAACTGGC...CTGGAACCTTGCTGTCCTGATCTGTGATAGTTCACCCCCTGAGATCCCCTGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR CAA 90 bp ACCCTGACGCTCCCATCACAGATGCTGATCATTCTTCCACGGACCCCCTTTTATTTGCCGTATTTGTCCTaGATGACTCCCTTGAGTGTA +
Preference number: 5 (lower is better)
Translates to: TLTLPSQMLIILPRTPFYLPYLS*MTPLSV
Trigger: TACACTCAAGGGAGTCATCAAGGACAAATACGGCAA...ATAAAAGGGGGTCCGTGGAAGAATGATCAGCATCTGTGATGGGAGCGTCAGGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000538763.5
ENST00000541477.5
CDS-3UTR CAA 90 bp CTGACGCTCCCATCACAGATGCTGATCATTCTTCCACGGACCCCCTTTTATAATGCATCCTTGCCGTATTaGTCCTTGATGACTCCCTTG +
Preference number: 5 (lower is better)
Translates to: LTLPSQMLIILPRTPFYNASLPY*SLMTPL
Trigger: CAAGGGAGTCATCAAGGACAAATACGGCAAGGATGC...ATTATAAAAGGGGGTCCGTGGAAGAATGATCAGCATCTGTGATGGGAGCGTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000538763.5
ENST00000541477.5
CDS-3UTR CAA 90 bp CTGACGCTCCCATCACAGATGCTGATCATTCTTCCACGGACCCCCTTTTATAATATCTGGATCCCTACATaGGCTGTGAACTTGGACCAG +
Preference number: 5 (lower is better)
Translates to: LTLPSQMLIILPRTPFYNIWIPT*AVNLDQ
Trigger: CTGGTCCAAGTTCACAGCCAATGTAGGGATCCAGAT...ATTATAAAAGGGGGTCCGTGGAAGAATGATCAGCATCTGTGATGGGAGCGTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000538763.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR CAA 90 bp ACGCTCCCATCACAGATGCTGATCATTCTTCCACGGACCCCCTTTTATAATAATACACCCAGGATGGCATaGGCCCCAAACTTGGCTTTG +
Preference number: 5 (lower is better)
Translates to: TLPSQMLIILPRTPFYNNTPRMA*APNLAL
Trigger: CAAAGCCAAGTTTGGGGCCAATGCCATCCTGGGTGT...ATTATTATAAAAGGGGGTCCGTGGAAGAATGATCAGCATCTGTGATGGGAGCGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000538763.5
CDS-3UTR CAA 90 bp ATCTACAGCCACATGAAATACAGACACATCGTTCCCCCAAGTCAGGCCAGTTTTGCATTGGCCCCAAACTaGGATTTGTTCTCAGTCCCA +
Preference number: 5 (lower is better)
Translates to: IYSHMKYRHIVPPSQASFALAPN*DLFSVP
Trigger: TGGGACTGAGAACAAATCCAAGTTTGGGGCCAATGC...AAAACTGGCCTGACTTGGGGGAACGATGTGTCTGTATTTCATGTGGCTGTAGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
CDS-3UTR CAA 90 bp ATCTACAGCCACATGAAATACAGACACATCGTTCCCCCAAGTCAGGCCAGTTTTGCATCCTTGCCGTATTaGTCCTTGATGACTCCCTTG +
Preference number: 5 (lower is better)
Translates to: IYSHMKYRHIVPPSQASFASLPY*SLMTPL
Trigger: CAAGGGAGTCATCAAGGACAAATACGGCAAGGATGC...AAAACTGGCCTGACTTGGGGGAACGATGTGTCTGTATTTCATGTGGCTGTAGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
CDS-3UTR CAA 90 bp AGAGGAATCACAGCACACTGGGATTACGGAAGTTATGTCCGGCAAAGCGAGCTTATTCTCATGAGCTGGTaGTATTTAGCCAGACGTTCA +
Preference number: 5 (lower is better)
Translates to: RGITAHWDYGSYVRQSELILMSW*YLARRS
Trigger: TGAACGTCTGGCTAAATACAACCAGCTCATGAGAAT...AAGCTCGCTTTGCCGGACATAACTTCCGTAATCCCAGTGTGCTGTGATTCCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535275.5
ENST00000543975.1
CDS-3UTR CAA 90 bp CCATCACAGATGCTGATCATTCTTCCACGGACCCCCTTTTATAATAATCCTCATGCATTGGCCCCAAACTaGGATTTGTTCTCAGTCCCA +
Preference number: 5 (lower is better)
Translates to: PSQMLIILPRTPFYNNPHALAPN*DLFSVP
Trigger: TGGGACTGAGAACAAATCCAAGTTTGGGGCCAATGC...ATGAGGATTATTATAAAAGGGGGTCCGTGGAAGAATGATCAGCATCTGTGATGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
CDS-3UTR CAA 90 bp GATCTACAGCCACATGAAATACAGACACATCGTTCCCCCAAGTCAGGCCAGTTTATTCTCATGAGCTGGTaGTATTTAGCCAGACGTTCA +
Preference number: 5 (lower is better)
Translates to: DLQPHEIQTHRSPKSGQFILMSW*YLARRS
Trigger: TGAACGTCTGGCTAAATACAACCAGCTCATGAGAAT...AAACTGGCCTGACTTGGGGGAACGATGTGTCTGTATTTCATGTGGCTGTAGATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR CAA 90 bp GATCTACAGCCACATGAAATACAGACACATCGTTCCCCCAAGTCAGGCCAGTTTGCCAGTTTTAGGCCATaGAGTTATGGGGAAATGATT +
Preference number: 5 (lower is better)
Translates to: DLQPHEIQTHRSPKSGQFASFRP*SYGEMI
Trigger: AATCATTTCCCCATAACTCAATGGCCTAAAACTGGC...AAACTGGCCTGACTTGGGGGAACGATGTGTCTGTATTTCATGTGGCTGTAGATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS-3UTR CAA 90 bp ACGCTCCCATCACAGATGCTGATCATTCTTCCACGGACCCCCTTTTATAATAATATTCTCATGAGCTGGTaGTATTTAGCCAGACGTTCA +
Preference number: 5 (lower is better)
Translates to: TLPSQMLIILPRTPFYNNILMSW*YLARRS
Trigger: TGAACGTCTGGCTAAATACAACCAGCTCATGAGAAT...ATTATTATAAAAGGGGGTCCGTGGAAGAATGATCAGCATCTGTGATGGGAGCGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000538763.5
ENST00000541477.5
ENST00000545045.6
CDS TCA 72 bp AGGGCCGCGCGGGCGCATGTGACCCGGAGCCCCCGATaGGTCAGGAGCTGCCGGCGGAGGCGCACGTACGAG +
Preference number: 6 (lower is better)
Translates to: RAARAHVTRSPR*VRSCRRRRTYE
Trigger: CTCGTACGTGCGCCTCCGCCGGCAGCTCCTGACTCATCGGGGGCTCCGGGTCACATGCGCCCGCGCGGCCCT
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000541477.5
CDS CCA 72 bp GTGGTTCCCGCGCCTCTTTGCAGCTTGGCCAGCCGGTaGGGTTCCCCCAGATCTCCTCAGAGCGGAATGGCT +
Preference number: 6 (lower is better)
Translates to: VVPAPLCSLASR*GSPRSPQSGMA
Trigger: AGCCATTCCGCTCTGAGGAGATCTGGGGGAACCCCACCGGCTGGCCAAGCTGCAAAGAGGCGCGGGAACCAC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000535366.5
ENST00000536199.5
CDS CCA 72 bp GAGAACACTGCAGTGAGGAGGGGAGGGGCACGACAGTaGTTCCCGCGCCTCTTTGCAGCTTGGCCAGCCGGT +
Preference number: 6 (lower is better)
Translates to: ENTAVRRGGARQ*FPRLFAAWPAG
Trigger: ACCGGCTGGCCAAGCTGCAAAGAGGCGCGGGAACCACTGTCGTGCCCCTCCCCTCCTCACTGCAGTGTTCTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000535366.5
ENST00000536199.5
CDS CCA 72 bp GCCGGTGGGGTTCCCCCAGATCTCCTCAGAGCGGAATaGCTGCCAGGCTTGCATTTCTCCTCGGGACTGCAG +
Preference number: 6 (lower is better)
Translates to: AGGVPPDLLRAE*LPGLHFSSGLQ
Trigger: CTGCAGTCCCGAGGAGAAATGCAAGCCTGGCAGCCATTCCGCTCTGAGGAGATCTGGGGGAACCCCACCGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536199.5
CDS TCA 72 bp GGCACAGGCAGGATGAGGTCTGAGTTCCCGGCCAGCTaGGCAATGTGGCGATACAGGGGCAGTTCCCGCTCA +
Preference number: 6 (lower is better)
Translates to: GTGRMRSEFPAS*AMWRYRGSSRS
Trigger: TGAGCGGGAACTGCCCCTGTATCGCCACATTGCTCAGCTGGCCGGGAACTCAGACCTCATCCTGCCTGTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000229277.6
ENST00000441285.2
ENST00000535366.5
ENST00000538763.5
ENST00000541477.5
CDS CCA 72 bp GCCGGTGGGGTTCCCCCAGATCTCCTCAGAGCGGAATaGCTGCCAGGCTTGCATTTCTCCTGGGAGCCAAGA +
Preference number: 6 (lower is better)
Translates to: AGGVPPDLLRAE*LPGLHFSWEPR
Trigger: TCTTGGCTCCCAGGAGAAATGCAAGCCTGGCAGCCATTCCGCTCTGAGGAGATCTGGGGGAACCCCACCGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535366.5
CDS GCA 72 bp GAAGCCACTACAGCACTGGCCCTTCAGCTCTCTATCTaGTCCACGCCTCCCCACCCTGACGCTTCCCCACTT +
Preference number: 6 (lower is better)
Translates to: EATTALALQLSI*STPPHPDASPL
Trigger: AAGTGGGGAAGCGTCAGGGTGGGGAGGCGTGGAGCAGATAGAGAGCTGAAGGGCCAGTGCTGTAGTGGCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539713.5
CDS GCA 72 bp GTGGGGTTCCCCCAGATCTCCTCAGAGCGGAATGGCTaGCAGGCTTGCATTTCTCCTGGGAGCCAAGAAGAG +
Preference number: 6 (lower is better)
Translates to: VGFPQISSERNG*QACISPGSQEE
Trigger: CTCTTCTTGGCTCCCAGGAGAAATGCAAGCCTGGCAGCCATTCCGCTCTGAGGAGATCTGGGGGAACCCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535366.5
CDS TCA 72 bp AAGCTCACATTTGGCCAGGGTCCAACCAGGTCCCTGTaGCAGGGGCCTACCTGGATTAGGGGACCTGAACTC +
Preference number: 6 (lower is better)
Translates to: KLTFGQGPTRSL*QGPTWIRGPEL
Trigger: GAGTTCAGGTCCCCTAATCCAGGTAGGCCCCTGTCACAGGGACCTGGTTGGACCCTGGCCAAATGTGAGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542509.1
CDS GCA 72 bp GACCACAGGATAGTCCCTGACAAAGTCCTGGTAGAGTaGCCCCAGCTGGTCCCCAGTGATGTATCGGGAAGG +
Preference number: 6 (lower is better)
Translates to: DHRIVPDKVLVE*PQLVPSDVSGR
Trigger: CCTTCCCGATACATCACTGGGGACCAGCTGGGGGCACTCTACCAGGACTTTGTCAGGGACTATCCTGTGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000538763.5
ENST00000541477.5
ENST00000545045.6
CDS CAA 72 bp CCCATCCAACTCCAGCATCAGGTTGTCCAGTTTCTCTaGCTCCACCACAGAGAGACCCTGAGGGCAGAGCCT +
Preference number: 6 (lower is better)
Translates to: PIQLQHQVVQFL*LHHRETLRAEP
Trigger: AGGCTCTGCCCTCAGGGTCTCTCTGTGGTGGAGCAAGAGAAACTGGACAACCTGATGCTGGAGTTGGATGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542509.1
CDS TCA 72 bp TCTCCCCTTGCTCTGGCTTTGAGAGGAGAATGCCCCTaGCAGTCATTCCTGAGGAAGCCACTACAGCACTGG +
Preference number: 6 (lower is better)
Translates to: SPLALALRGECP*QSFLRKPLQHW
Trigger: CCAGTGCTGTAGTGGCTTCCTCAGGAATGACTGTCAGGGGCATTCTCCTCTCAAAGCCAGAGCAAGGGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539713.5
CDS GCA 72 bp CAAACGTGTATCCCTCCTCTTCCCGCGAAAGGCGCATaGAATACAGGTGTCGGGGAAGAGGGTCCTGAGAAA +
Preference number: 6 (lower is better)
Translates to: QTCIPPLPAKGA*NTGVGEEGPEK
Trigger: TTTCTCAGGACCCTCTTCCCCGACACCTGTATTGCATGCGCCTTTCGCGGGAAGAGGAGGGATACACGTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535366.5
CDS TCA 72 bp CCCCAAACTTGGCTAGGAGATTATAGAGGAAGGTGCTaGGCACAATGTCCCCTTCTCCTTTCTAGCTCCTGC +
Preference number: 6 (lower is better)
Translates to: PQTWLGDYRGRC*AQCPLLLSSSC
Trigger: GCAGGAGCTAGAAAGGAGAAGGGGACATTGTGCTCAGCACCTTCCTCTATAATCTCCTAGCCAAGTTTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441285.2
CDS CAA 72 bp GATTTGTTCTCAGTCCCATCCAACTCCAGCATCAGGTaGTCCAGTTTCTCTTGCTCCACCACAGAGAGACCC +
Preference number: 6 (lower is better)
Translates to: DLFSVPSNSSIR*SSFSCSTTERP
Trigger: GGGTCTCTCTGTGGTGGAGCAAGAGAAACTGGACAACCTGATGCTGGAGTTGGATGGGACTGAGAACAAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542509.1
CDS GCA 72 bp TTCATCTTCCCTGGGTCTCTACATCAGGCAGGAACATaGCCCTTTATTCCCAGGATAGTCCCTGACAAAGTC +
Preference number: 6 (lower is better)
Translates to: FIFPGSLHQAGT*PFIPRIVPDKV
Trigger: GACTTTGTCAGGGACTATCCTGGGAATAAAGGGGCATGTTCCTGCCTGATGTAGAGACCCAGGGAAGATGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535275.5
CDS CAA 72 bp GATTTGTTCTCAGTCCCATCCAACTCCAGCATCAGGTaGTCCAGTTTCTCTTGCTCCACCACAGAGAGACCT +
Preference number: 6 (lower is better)
Translates to: DLFSVPSNSSIR*SSFSCSTTERP
Trigger: AGGTCTCTCTGTGGTGGAGCAAGAGAAACTGGACAACCTGATGCTGGAGTTGGATGGGACTGAGAACAAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000229277.6
ENST00000535366.5
ENST00000541477.5
ENST00000545045.6
CDS CAA 72 bp CATTTGTTCTCAGTCCCATCCAACTCCAGCATCAGGTaGTCCAGTTTCTCTTGCTCCACCACAGAGAGACCT +
Preference number: 6 (lower is better)
Translates to: HLFSVPSNSSIR*SSFSCSTTERP
Trigger: AGGTCTCTCTGTGGTGGAGCAAGAGAAACTGGACAACCTGATGCTGGAGTTGGATGGGACTGAGAACAAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539713.5