RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ENKUR (Homo sapiens)

Ensembl gene IDs: ENSG00000151023

Ensembl transcript IDs: ENST00000331161.9, ENST00000376363.5, ENST00000483339.2, ENST00000496261.6, ENST00000615958.4

Found 255 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ATCAACAGAGTCACCAGACAAAAGGAGACTGGGTCCCTGAGTGACTaGATGGAACAGACTTATACCCCTACCCTTAGTCACATTGCACAG +
Preference number: 1 (lower is better)
Translates to: INRVTRQKETGSLSD*MEQTYTPTLSHIAQ
Trigger: CTGTGCAATGTGACTAAGGGTAGGGGTATAAGTCTGTTCCATGCAGTCACTCAGGGACCCAGTCTCCTTTTGTCTGGTGACTCTGTTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331161.9
ENST00000615958.4
3UTR TCA 90 bp GGAAGGCCAGATTCTGAGGAATCAAAGGGGATTGTCATGGAAATGTaGTGTGAGCTGATGAAGACTAGGGATTTGCCAGGCAGCTATGTA +
Preference number: 1 (lower is better)
Translates to: GRPDSEESKGIVMEM*CELMKTRDLPGSYV
Trigger: TACATAGCTGCCTGGCAAATCCCTAGTCTTCATCAGCTCACATCACATTTCCATGACAATCCCCTTTGATTCCTCAGAATCTGGCCTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
3UTR TCA 90 bp CAGTCTCCATGTCTCTTAATTCATGCTCTCAAGAGAGAGAGAATCTaGTCAGTCACTGGTCAGCTGTCCAAGTCAGATGTTTGTCCCTCT +
Preference number: 1 (lower is better)
Translates to: QSPCLLIHALKRERI*SVTGQLSKSDVCPS
Trigger: AGAGGGACAAACATCTGACTTGGACAGCTGACCAGTGACTGATCAGATTCTCTCTCTCTTGAGAGCATGAATTAAGAGACATGGAGACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
3UTR TCA 90 bp CTTTCCAGGAACAATGGATGGGAATGTTTCCCTCTGAAGGCTCTGTaGAAGAAAGGCAACAATGTTCATCTAGGACAACACTGTAGACCA +
Preference number: 1 (lower is better)
Translates to: LSRNNGWECFPLKAL*KKGNNVHLGQHCRP
Trigger: TGGTCTACAGTGTTGTCCTAGATGAACATTGTTGCCTTTCTTTCACAGAGCCTTCAGAGGGAAACATTCCCATCCATTGTTCCTGGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331161.9
ENST00000615958.4
3UTR CCA 90 bp ACTGCAAATGTCATGGGCCACAGGAAAATACATCTTTTGCATTTGTaGAGCTCAGAAACAATGTGTTGGAGACAGTTTAGAGTAGCAAGA +
Preference number: 1 (lower is better)
Translates to: TANVMGHRKIHLLHL*SSETMCWRQFRVAR
Trigger: TCTTGCTACTCTAAACTGTCTCCAACACATTGTTTCTGAGCTCCACAAATGCAAAAGATGTATTTTCCTGTGGCCCATGACATTTGCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
3UTR TCA 90 bp TACCTTCTCTATACCAGCTGTTATGCAGATTCTAAGGAATGCAGATaGAAATGTATACAGTGTCTTCTCCCCCATAAGCTTGAAATGTTC +
Preference number: 1 (lower is better)
Translates to: YLLYTSCYADSKECR*KCIQCLLPHKLEMF
Trigger: GAACATTTCAAGCTTATGGGGGAGAAGACACTGTATACATTTTCATCTGCATTCCTTAGAATCTGCATAACAGCTGGTATAGAGAAGGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
3UTR-3UTR GCA 90 bp TACGTGCCTCTCCCTAACTCTGGATCAGATGCATCCTACCCACTCTGTAAGTCTGGGTTCCTGCTGACCTaGTCACAGCAAAGTACTGCT +
Preference number: 2 (lower is better)
Translates to: YVPLPNSGSDASYPLCKSGFLLT*SQQSTA
Trigger: AGCAGTACTTTGCTGTGAGCAGGTCAGCAGGAACCC...AGACTTACAGAGTGGGTAGGATGCATCTGATCCAGAGTTAGGGAGAGGCACGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331161.9
ENST00000615958.4
3UTR CAA 90 bp TGTATGTGTATGGATTGGGGGAGGTTGAACTGGCTCTATCCAAGTTaGGGATCCCGTGGTAGGGATCACCTTTCCAGGAACAATGGATGG +
Preference number: 2 (lower is better)
Translates to: CMCMDWGRLNWLYPS*GSRGRDHLSRNNGW
Trigger: CCATCCATTGTTCCTGGAAAGGTGATCCCTACCACGGGATCCCAAACTTGGATAGAGCCAGTTCAACCTCCCCCAATCCATACACATACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
3UTR-3UTR GCA 90 bp GGGAGGTTGAACTGGCTCTATCCAAGTTTGGGATCCCGTGGTAGGGATCACCTTCAAACGGGAATGATATaGATCATTTCTAGGCCTGGC +
Preference number: 2 (lower is better)
Translates to: GRLNWLYPSLGSRGRDHLQTGMI*IISRPG
Trigger: GCCAGGCCTAGAAATGATGCATATCATTCCCGTTTG...AAGGTGATCCCTACCACGGGATCCCAAACTTGGATAGAGCCAGTTCAACCTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331161.9
ENST00000615958.4
3UTR-3UTR TCA 90 bp GGATCAGATGCATCCTACCCACTCTGTAAGTCTGGGTCCCTGAGTGACTGCAGACAAATTCTGTGTTTGTaGAAAAAGCCTGAAAGACTC +
Preference number: 2 (lower is better)
Translates to: GSDASYPLCKSGSLSDCRQILCL*KKPERL
Trigger: GAGTCTTTCAGGCTTTTTTCACAAACACAGAATTTG...TCTGCAGTCACTCAGGGACCCAGACTTACAGAGTGGGTAGGATGCATCTGATCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331161.9
ENST00000615958.4
3UTR-3UTR TCA 90 bp TCATGCTCTCAAGAGAGAGAGAATCTGATCAGTCACTGGTCAGCTGTCCAAGTCCGATGCAAACGGGAATaGTATGCATCATTTCTAGGC +
Preference number: 2 (lower is better)
Translates to: SCSQERENLISHWSAVQVRCKRE*YASFLG
Trigger: GCCTAGAAATGATGCATATCATTCCCGTTTGCATCG...GACTTGGACAGCTGACCAGTGACTGATCAGATTCTCTCTCTCTTGAGAGCATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331161.9
ENST00000615958.4
3UTR-3UTR TCA 90 bp TCATGCTCTCAAGAGAGAGAGAATCTGATCAGTCACTGGTCAGCTGTCCAAGTCCCTCTGAAGGCTCTGTaGAAGAAAGGCAACAATGTT +
Preference number: 2 (lower is better)
Translates to: SCSQERENLISHWSAVQVPLKAL*KKGNNV
Trigger: AACATTGTTGCCTTTCTTTCACAGAGCCTTCAGAGG...GACTTGGACAGCTGACCAGTGACTGATCAGATTCTCTCTCTCTTGAGAGCATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331161.9
ENST00000615958.4
3UTR-3UTR GCA 90 bp GATTGGGGGAGGTTGAACTGGCTCTATCCAAGTTTGGGATCCCGTGGTAGGGATGGAAAATACATCTTTTaGATTTGTGGAGCTCAGAAA +
Preference number: 2 (lower is better)
Translates to: DWGRLNWLYPSLGSRGRDGKYIF*ICGAQK
Trigger: TTTCTGAGCTCCACAAATGCAAAAGATGTATTTTCC...ATCCCTACCACGGGATCCCAAACTTGGATAGAGCCAGTTCAACCTCCCCCAATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
3UTR-3UTR GCA 90 bp AACAGACTTATACCCCTACCCTTAGTCACATTGCACAGTGATGTAAATGAAAAAGGCCTGGCCTGTACGTaGCTCTCCCTAACTCTGGAT +
Preference number: 2 (lower is better)
Translates to: NRLIPLPLVTLHSDVNEKGLACT*LSLTLD
Trigger: ATCCAGAGTTAGGGAGAGGCACGTACAGGCCAGGCC...TTTTTCATTTACATCACTGTGCAATGTGACTAAGGGTAGGGGTATAAGTCTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331161.9
ENST00000615958.4
3UTR-3UTR TCA 90 bp TACGTGCCTCTCCCTAACTCTGGATCAGATGCATCCTACCCACTCTGTAAGTCTCAGTGTTACGAATACTaGAAATATTTCTCACTGGGA +
Preference number: 2 (lower is better)
Translates to: YVPLPNSGSDASYPLCKSQCYEY*KYFSLG
Trigger: TCCCAGTGAGAAATATTTTCAGTATTCGTAACACTG...AGACTTACAGAGTGGGTAGGATGCATCTGATCCAGAGTTAGGGAGAGGCACGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331161.9
ENST00000615958.4
3UTR-3UTR TCA 90 bp ACAATACAATATGACCAGTGCTATAAAGGAAGGCCAGATTCTGAGGAATCAAAGGTAAGTCTGGGTCCCTaGGTGACTGCAGAAAAGGGT +
Preference number: 2 (lower is better)
Translates to: TIQYDQCYKGRPDSEESKVSLGP*VTAEKG
Trigger: ACCCTTTTCTGCAGTCACTCAGGGACCCAGACTTAC...CTTTGATTCCTCAGAATCTGGCCTTCCTTTATAGCACTGGTCATATTGTATTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331161.9
ENST00000615958.4
3UTR-3UTR TCA 90 bp ACAATACAATATGACCAGTGCTATAAAGGAAGGCCAGATTCTGAGGAATCAAAGGACTGGGTCCCTGAGTaGCTGCATGGAACAGACTTA +
Preference number: 2 (lower is better)
Translates to: TIQYDQCYKGRPDSEESKDWVPE*LHGTDL
Trigger: TAAGTCTGTTCCATGCAGTCACTCAGGGACCCAGTC...CTTTGATTCCTCAGAATCTGGCCTTCCTTTATAGCACTGGTCATATTGTATTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331161.9
ENST00000615958.4
3UTR-3UTR TCA 90 bp ACAATACAATATGACCAGTGCTATAAAGGAAGGCCAGATTCTGAGGAATCAAAGGTGTCTACTCCCAAGTaGCTGCAGTCTCCATGTCTC +
Preference number: 2 (lower is better)
Translates to: TIQYDQCYKGRPDSEESKVSTPK*LQSPCL
Trigger: GAGACATGGAGACTGCAGTCACTTGGGAGTAGACAC...CTTTGATTCCTCAGAATCTGGCCTTCCTTTATAGCACTGGTCATATTGTATTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
3UTR-3UTR CCA 90 bp TACGTGCCTCTCCCTAACTCTGGATCAGATGCATCCTACCCACTCTGTAAGTCTTCAGAAACAATGTGTTaGAGACAGTTTAGAGTAGCA +
Preference number: 2 (lower is better)
Translates to: YVPLPNSGSDASYPLCKSSETMC*RQFRVA
Trigger: TGCTACTCTAAACTGTCTCCAACACATTGTTTCTGA...AGACTTACAGAGTGGGTAGGATGCATCTGATCCAGAGTTAGGGAGAGGCACGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331161.9
ENST00000615958.4
3UTR-3UTR CCA 90 bp TCATGCTCTCAAGAGAGAGAGAATCTGATCAGTCACTGGTCAGCTGTCCAAGTCCGTAATTATACATTTTaGAGTGTACTGTCACAGCTG +
Preference number: 2 (lower is better)
Translates to: SCSQERENLISHWSAVQVRNYTF*SVLSQL
Trigger: CAGCTGTGACAGTACACTCCAAAATGTATAATTACG...GACTTGGACAGCTGACCAGTGACTGATCAGATTCTCTCTCTCTTGAGAGCATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331161.9
ENST00000615958.4
3UTR-3UTR TCA 90 bp ACAATACAATATGACCAGTGCTATAAAGGAAGGCCAGATTCTGAGGAATCAAAGAAGAGAGAGAGAATCTaGTCAGTCACTGGTCAGCTG +
Preference number: 2 (lower is better)
Translates to: TIQYDQCYKGRPDSEESKKRERI*SVTGQL
Trigger: CAGCTGACCAGTGACTGATCAGATTCTCTCTCTCTT...CTTTGATTCCTCAGAATCTGGCCTTCCTTTATAGCACTGGTCATATTGTATTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
3UTR-3UTR GCA 90 bp CAAATAACCAGATATGCACAATACAATATGACCAGTGCTATAAAGGAAGGCCAGAGGCTTGGGAATAACTaGAAATGTCATGGGCCACAG +
Preference number: 2 (lower is better)
Translates to: QITRYAQYNMTSAIKEGQRLGNN*KCHGPQ
Trigger: CTGTGGCCCATGACATTTGCAGTTATTCCCAAGCCT...CTGGCCTTCCTTTATAGCACTGGTCATATTGTATTGTGCATATCTGGTTATTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496261.6
3UTR-3UTR CCA 90 bp TTCATGCTCTCAAGAGAGAGAGAATCTGATCAGTCACTGGTCAGCTGTCCAAGTTCAGAAACAATGTGTTaGAGACAGTTTAGAGTAGCA +
Preference number: 2 (lower is better)
Translates to: FMLSRERESDQSLVSCPSSETMC*RQFRVA
Trigger: TGCTACTCTAAACTGTCTCCAACACATTGTTTCTGA...ACTTGGACAGCTGACCAGTGACTGATCAGATTCTCTCTCTCTTGAGAGCATGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
3UTR-3UTR CCA 90 bp GAAGGCCAGATTCTGAGGAATCAAAGGGGATTGTCATGGAAATGTGATGTGAGCTCAGAAACAATGTGTTaGAGACAGTTTAGAGTAGCA +
Preference number: 2 (lower is better)
Translates to: EGQILRNQRGLSWKCDVSSETMC*RQFRVA
Trigger: TGCTACTCTAAACTGTCTCCAACACATTGTTTCTGA...GCTCACATCACATTTCCATGACAATCCCCTTTGATTCCTCAGAATCTGGCCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
3UTR-3UTR CCA 90 bp GAAGGCCAGATTCTGAGGAATCAAAGGGGATTGTCATGGAAATGTGATGTGAGCCATCTTTTGCATTTGTaGAGCTCAGAAACAATGTGT +
Preference number: 2 (lower is better)
Translates to: EGQILRNQRGLSWKCDVSHLLHL*SSETMC
Trigger: ACACATTGTTTCTGAGCTCCACAAATGCAAAAGATG...GCTCACATCACATTTCCATGACAATCCCCTTTGATTCCTCAGAATCTGGCCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
3UTR-3UTR CCA 90 bp ACAATACAATATGACCAGTGCTATAAAGGAAGGCCAGATTCTGAGGAATCAAAGGAATGCCAGTTACAGTaGGTAGGGAAGAAGCAGCAT +
Preference number: 2 (lower is better)
Translates to: TIQYDQCYKGRPDSEESKECQLQ*VGKKQH
Trigger: ATGCTGCTTCTTCCCTACCCACTGTAACTGGCATTC...CTTTGATTCCTCAGAATCTGGCCTTCCTTTATAGCACTGGTCATATTGTATTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
3UTR CAA 90 bp CTGGGAATAACTGCAAATGTCATGGGCCACAGGAAAATACATCTTTaGCATTTGTGGAGCTCAGAAACAATGTGTTGGAGACAGTTTAGA +
Preference number: 2 (lower is better)
Translates to: LGITANVMGHRKIHL*HLWSSETMCWRQFR
Trigger: TCTAAACTGTCTCCAACACATTGTTTCTGAGCTCCACAAATGCAAAAGATGTATTTTCCTGTGGCCCATGACATTTGCAGTTATTCCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331161.9
ENST00000615958.4
3UTR CAA 90 bp TTGGGAATAACTGCAAATGTCATGGGCCACAGGAAAATACATCTTTaGCATTTGTGGAGCTCAGAAACAATGTGTTGGAGACAGTTTAGA +
Preference number: 2 (lower is better)
Translates to: LGITANVMGHRKIHL*HLWSSETMCWRQFR
Trigger: TCTAAACTGTCTCCAACACATTGTTTCTGAGCTCCACAAATGCAAAAGATGTATTTTCCTGTGGCCCATGACATTTGCAGTTATTCCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496261.6
3UTR-3UTR CCA 90 bp TTTGACTTTTTAGTTTCAGGTGTCTACTCCCAAGTGACTGCAGTCTCCATGTCTCATCTTTTGCATTTGTaGAGCTCAGAAACAATGTGT +
Preference number: 2 (lower is better)
Translates to: FDFLVSGVYSQVTAVSMSHLLHL*SSETMC
Trigger: ACACATTGTTTCTGAGCTCCACAAATGCAAAAGATG...AGACATGGAGACTGCAGTCACTTGGGAGTAGACACCTGAAACTAAAAAGTCAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
3UTR-3UTR GCA 90 bp TTTGACTTTTTAGTTTCAGGTGTCTACTCCCAAGTGACTGCAGTCTCCATGTCTGGAAAATACATCTTTTaGATTTGTGGAGCTCAGAAA +
Preference number: 2 (lower is better)
Translates to: FDFLVSGVYSQVTAVSMSGKYIF*ICGAQK
Trigger: TTTCTGAGCTCCACAAATGCAAAAGATGTATTTTCC...AGACATGGAGACTGCAGTCACTTGGGAGTAGACACCTGAAACTAAAAAGTCAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
3UTR-3UTR TCA 90 bp AAAAAGATCATAGACAAGGGGCCAGACCACATCAAATCTTTATTCTACCCATTCCAGTGTTACGAATACTaGAAATATTTCTCACTGGGA +
Preference number: 2 (lower is better)
Translates to: KKIIDKGPDHIKSLFYPFQCYEY*KYFSLG
Trigger: TCCCAGTGAGAAATATTTTCAGTATTCGTAACACTG...GAATGGGTAGAATAAAGATTTGATGTGGTCTGGCCCCTTGTCTATGATCTTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331161.9
ENST00000615958.4
3UTR-3UTR GCA 90 bp AAAAAGATCATAGACAAGGGGCCAGACCACATCAAATCTTTATTCTACCCATTCGGAAAATACATCTTTTaGATTTGTGGAGCTCAGAAA +
Preference number: 2 (lower is better)
Translates to: KKIIDKGPDHIKSLFYPFGKYIF*ICGAQK
Trigger: TTTCTGAGCTCCACAAATGCAAAAGATGTATTTTCC...GAATGGGTAGAATAAAGATTTGATGTGGTCTGGCCCCTTGTCTATGATCTTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
3UTR TCA 72 bp TCAACAGAGTCACCAGACAAAAGGAGACTGGGTCCCTaGGTGACTGCATGGAACAGACTTATACCCCTACCC +
Preference number: 3 (lower is better)
Translates to: STESPDKRRLGP*VTAWNRLIPLP
Trigger: GGGTAGGGGTATAAGTCTGTTCCATGCAGTCACTCAGGGACCCAGTCTCCTTTTGTCTGGTGACTCTGTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331161.9
ENST00000615958.4
3UTR-3UTR CAA 90 bp TCATGCTCTCAAGAGAGAGAGAATCTGATCAGTCACTGGTCAGCTGTCCAAGTCTGGCTCTATCCAAGTTaGGGATCCCGTGGTAGGGAT +
Preference number: 3 (lower is better)
Translates to: SCSQERENLISHWSAVQVWLYPS*GSRGRD
Trigger: ATCCCTACCACGGGATCCCAAACTTGGATAGAGCCA...GACTTGGACAGCTGACCAGTGACTGATCAGATTCTCTCTCTCTTGAGAGCATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
3UTR CCA 72 bp TGTAGGATGAGAGAAAGAAAAGGGCAGTTTTCTGGGTaGAGGGAACCATGTGTGCAGATCTCAGAGGTCTCT +
Preference number: 3 (lower is better)
Translates to: CRMRERKGQFSG*REPCVQISEVS
Trigger: AGAGACCTCTGAGATCTGCACACATGGTTCCCTCCACCCAGAAAACTGCCCTTTTCTTTCTCTCATCCTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
3UTR GCA 72 bp TCCCTGAGTGACTGCAGAAAAGGGTTCCTGCTGACCTaGTCACAGCAAAGTACTGCTATGTTAGCAAGAATT +
Preference number: 3 (lower is better)
Translates to: SLSDCRKGFLLT*SQQSTAMLARI
Trigger: AATTCTTGCTAACATAGCAGTACTTTGCTGTGAGCAGGTCAGCAGGAACCCTTTTCTGCAGTCACTCAGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331161.9
ENST00000615958.4
3UTR GCA 72 bp ATCTCAGAGGTCTCTAGTACCTCAGTACTATGGGAATaGCAGTTACAGTGGGTAGGGAAGAAGCAGCATTTC +
Preference number: 3 (lower is better)
Translates to: ISEVSSTSVLWE*QLQWVGKKQHF
Trigger: GAAATGCTGCTTCTTCCCTACCCACTGTAACTGGCATTCCCATAGTACTGAGGTACTAGAGACCTCTGAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
3UTR-3UTR CAA 90 bp ACTGGCTCTATCCAAGTTTGGGATCCCGTGGTAGGGATCACCTTTCCAGGAACAATACATCTTTTGCATTaGTGGAGCTCAGAAACAATG +
Preference number: 3 (lower is better)
Translates to: TGSIQVWDPVVGITFPGTIHLLH*WSSETM
Trigger: CATTGTTTCTGAGCTCCACAAATGCAAAAGATGTAT...TGTTCCTGGAAAGGTGATCCCTACCACGGGATCCCAAACTTGGATAGAGCCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
3UTR TCA 72 bp CAAGTCAGATGTTTGTCCCTCTTTTGGGTGATAGGATaGCCTAGGTATGTATGTGTATGGATTGGGGGAGGT +
Preference number: 3 (lower is better)
Translates to: QVRCLSLFWVIG*PRYVCVWIGGG
Trigger: ACCTCCCCCAATCCATACACATACATACCTAGGTCATCCTATCACCCAAAAGAGGGACAAACATCTGACTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
3UTR TCA 72 bp GATTCTGAGGAATCAAAGGGGATTGTCATGGAAATGTaGTGTGAGCTGATGAAGACTAGGGATTTGCCAGGC +
Preference number: 3 (lower is better)
Translates to: DSEESKGIVMEM*CELMKTRDLPG
Trigger: GCCTGGCAAATCCCTAGTCTTCATCAGCTCACATCACATTTCCATGACAATCCCCTTTGATTCCTCAGAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
3UTR CCA 72 bp TCATGCTCTCAAGAGAGAGAGAATCTGATCAGTCACTaGTCAGCTGTCCAAGTCAGATGTTTGTCCCTCTTT +
Preference number: 3 (lower is better)
Translates to: SCSQERENLISH*SAVQVRCLSLF
Trigger: AAAGAGGGACAAACATCTGACTTGGACAGCTGACCAGTGACTGATCAGATTCTCTCTCTCTTGAGAGCATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
3UTR-3UTR CAA 90 bp TACGTGCCTCTCCCTAACTCTGGATCAGATGCATCCTACCCACTCTGTAAGTCTAGGAAAATACATCTTTaGCATTTGTGGAGCTCAGAA +
Preference number: 3 (lower is better)
Translates to: YVPLPNSGSDASYPLCKSRKIHL*HLWSSE
Trigger: TTCTGAGCTCCACAAATGCAAAAGATGTATTTTCCT...AGACTTACAGAGTGGGTAGGATGCATCTGATCCAGAGTTAGGGAGAGGCACGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331161.9
ENST00000615958.4
3UTR CCA 72 bp TCTAGTACCTCAGTACTATGGGAATGCCAGTTACAGTaGGTAGGGAAGAAGCAGCATTTCAAGAAATCAAGC +
Preference number: 3 (lower is better)
Translates to: SSTSVLWECQLQ*VGKKQHFKKSS
Trigger: GCTTGATTTCTTGAAATGCTGCTTCTTCCCTACCCACTGTAACTGGCATTCCCATAGTACTGAGGTACTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
3UTR-3UTR CAA 90 bp TCATGCTCTCAAGAGAGAGAGAATCTGATCAGTCACTGGTCAGCTGTCCAAGTCAGGAAAATACATCTTTaGCATTTGTGGAGCTCAGAA +
Preference number: 3 (lower is better)
Translates to: SCSQERENLISHWSAVQVRKIHL*HLWSSE
Trigger: TTCTGAGCTCCACAAATGCAAAAGATGTATTTTCCT...GACTTGGACAGCTGACCAGTGACTGATCAGATTCTCTCTCTCTTGAGAGCATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
3UTR-3UTR CAA 90 bp TTTGACTTTTTAGTTTCAGGTGTCTACTCCCAAGTGACTGCAGTCTCCATGTCTTTTCCCTCTGAAGGCTaGGGAATAACTGCAAATGTC +
Preference number: 3 (lower is better)
Translates to: FDFLVSGVYSQVTAVSMSFPSEG*GITANV
Trigger: GACATTTGCAGTTATTCCCAAGCCTTCAGAGGGAAA...AGACATGGAGACTGCAGTCACTTGGGAGTAGACACCTGAAACTAAAAAGTCAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496261.6
3UTR-3UTR CAA 90 bp TCCCAAGTGACTGCAGTCTCCATGTCTCTTAATTCATGCTCTCAAGAGAGAGAGATACATCTTTTGCATTaGTGGAGCTCAGAAACAATG +
Preference number: 3 (lower is better)
Translates to: SQVTAVSMSLNSCSQEREIHLLH*WSSETM
Trigger: CATTGTTTCTGAGCTCCACAAATGCAAAAGATGTAT...CTCTCTCTCTTGAGAGCATGAATTAAGAGACATGGAGACTGCAGTCACTTGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
3UTR CCA 72 bp CATCTTTTGCATTTGTGGAGCTCAGAAACAATGTGTTaGAGACAGTTTAGAGTAGCAAGAAGGCACGTGTTA +
Preference number: 3 (lower is better)
Translates to: HLLHLWSSETMC*RQFRVARRHVL
Trigger: TAACACGTGCCTTCTTGCTACTCTAAACTGTCTCCAACACATTGTTTCTGAGCTCCACAAATGCAAAAGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
3UTR CCA 72 bp GTCATGGGCCACAGGAAAATACATCTTTTGCATTTGTaGAGCTCAGAAACAATGTGTTGGAGACAGTTTAGA +
Preference number: 3 (lower is better)
Translates to: VMGHRKIHLLHL*SSETMCWRQFR
Trigger: TCTAAACTGTCTCCAACACATTGTTTCTGAGCTCCACAAATGCAAAAGATGTATTTTCCTGTGGCCCATGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
3UTR-3UTR CAA 90 bp ACAATACAATATGACCAGTGCTATAAAGGAAGGCCAGATTCTGAGGAATCAAAGGTCCAAGTCAGATGTTaGTCCCTCTTTTGGGTGATA +
Preference number: 3 (lower is better)
Translates to: TIQYDQCYKGRPDSEESKVQVRC*SLFWVI
Trigger: TATCACCCAAAAGAGGGACAAACATCTGACTTGGAC...CTTTGATTCCTCAGAATCTGGCCTTCCTTTATAGCACTGGTCATATTGTATTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
3UTR GCA 72 bp GCAAATAACCAGATATGCACAATACAATATGACCAGTaGTATAAAGGAAGGCCAGATTCTGAGGAATCAAAG +
Preference number: 3 (lower is better)
Translates to: ANNQICTIQYDQ*YKGRPDSEESK
Trigger: CTTTGATTCCTCAGAATCTGGCCTTCCTTTATAGCACTGGTCATATTGTATTGTGCATATCTGGTTATTTGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
3UTR-3UTR CAA 90 bp AATCAAGCTAAAAAGATCATAGACAAGGGGCCAGACCACATCAAATCTTTATTCATACATCTTTTGCATTaGTGGAGCTCAGAAACAATG +
Preference number: 3 (lower is better)
Translates to: NQAKKIIDKGPDHIKSLFIHLLH*WSSETM
Trigger: CATTGTTTCTGAGCTCCACAAATGCAAAAGATGTAT...GAATAAAGATTTGATGTGGTCTGGCCCCTTGTCTATGATCTTTTTAGCTTGATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
CDS-3UTR GCA 90 bp GGGAGGTTGAACTGGCTCTATCCAAGTTTGGGATCCCGTGGTAGGGATCACCTTTCCCAGGCTTTCTTGTaGCGCTCCTCCAGCCGCCTG +
Preference number: 4 (lower is better)
Translates to: GRLNWLYPSLGSRGRDHLSQAFL*RSSSRL
Trigger: CAGGCGGCTGGAGGAGCGGCACAAGAAAGCCTGGGA...AAGGTGATCCCTACCACGGGATCCCAAACTTGGATAGAGCCAGTTCAACCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615958.4
CDS-3UTR CCA 90 bp ACTGGCTCTATCCAAGTTTGGGATCCCGTGGTAGGGATCACCTTTCCAGGAACACGTGTGGCCAGGCCCTaGGCTTTGAAATCGACCCTG +
Preference number: 4 (lower is better)
Translates to: TGSIQVWDPVVGITFPGTRVARP*ALKSTL
Trigger: CAGGGTCGATTTCAAAGCCCAGGGCCTGGCCACACG...TGTTCCTGGAAAGGTGATCCCTACCACGGGATCCCAAACTTGGATAGAGCCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615958.4
CDS-3UTR CCA 90 bp GGATCAGATGCATCCTACCCACTCTGTAAGTCTGGGTCCCTGAGTGACTGCAGAGGGCAGTTTTCTGGGTaGAGGGAACCATGTGTGCAG +
Preference number: 4 (lower is better)
Translates to: GSDASYPLCKSGSLSDCRGQFSG*REPCVQ
Trigger: CTGCACACATGGTTCCCTCCACCCAGAAAACTGCCC...TCTGCAGTCACTCAGGGACCCAGACTTACAGAGTGGGTAGGATGCATCTGATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331161.9
ENST00000615958.4
CDS-3UTR CCA 90 bp GGGAGGTTGAACTGGCTCTATCCAAGTTTGGGATCCCGTGGTAGGGATCACCTTGGCTCTATCCAAGTTTaGGATCCCGTGGTAGGGATC +
Preference number: 4 (lower is better)
Translates to: GRLNWLYPSLGSRGRDHLGSIQV*DPVVGI
Trigger: GATCCCTACCACGGGATCCCAAACTTGGATAGAGCC...AAGGTGATCCCTACCACGGGATCCCAAACTTGGATAGAGCCAGTTCAACCTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
3UTR CAA 72 bp ATGGATTGGGGGAGGTTGAACTGGCTCTATCCAAGTTaGGGATCCCGTGGTAGGGATCACCTTTCCAGGAAC +
Preference number: 4 (lower is better)
Translates to: MDWGRLNWLYPS*GSRGRDHLSRN
Trigger: GTTCCTGGAAAGGTGATCCCTACCACGGGATCCCAAACTTGGATAGAGCCAGTTCAACCTCCCCCAATCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
CDS-3UTR TCA 90 bp ACTGGCTCTATCCAAGTTTGGGATCCCGTGGTAGGGATCACCTTTCCAGGAACAGTGTCTACTCCCAAGTaGCTGCAGTCTCCATGTCTC +
Preference number: 4 (lower is better)
Translates to: TGSIQVWDPVVGITFPGTVSTPK*LQSPCL
Trigger: GAGACATGGAGACTGCAGTCACTTGGGAGTAGACAC...TGTTCCTGGAAAGGTGATCCCTACCACGGGATCCCAAACTTGGATAGAGCCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
CDS-3UTR CCA 90 bp TACGTGCCTCTCCCTAACTCTGGATCAGATGCATCCTACCCACTCTGTAAGTCTGGGCAGTTTTCTGGGTaGAGGGAACCATGTGTGCAG +
Preference number: 4 (lower is better)
Translates to: YVPLPNSGSDASYPLCKSGQFSG*REPCVQ
Trigger: CTGCACACATGGTTCCCTCCACCCAGAAAACTGCCC...AGACTTACAGAGTGGGTAGGATGCATCTGATCCAGAGTTAGGGAGAGGCACGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331161.9
ENST00000615958.4
CDS-3UTR TCA 90 bp TACGTGCCTCTCCCTAACTCTGGATCAGATGCATCCTACCCACTCTGTAAGTCTGTAAGTCTGGGTCCCTaGGTGACTGCAGAAAAGGGT +
Preference number: 4 (lower is better)
Translates to: YVPLPNSGSDASYPLCKSVSLGP*VTAEKG
Trigger: ACCCTTTTCTGCAGTCACTCAGGGACCCAGACTTAC...AGACTTACAGAGTGGGTAGGATGCATCTGATCCAGAGTTAGGGAGAGGCACGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331161.9
ENST00000615958.4
CDS-3UTR TCA 90 bp TACGTGCCTCTCCCTAACTCTGGATCAGATGCATCCTACCCACTCTGTAAGTCTGACTGGGTCCCTGAGTaGCTGCATGGAACAGACTTA +
Preference number: 4 (lower is better)
Translates to: YVPLPNSGSDASYPLCKSDWVPE*LHGTDL
Trigger: TAAGTCTGTTCCATGCAGTCACTCAGGGACCCAGTC...AGACTTACAGAGTGGGTAGGATGCATCTGATCCAGAGTTAGGGAGAGGCACGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331161.9
ENST00000615958.4
CDS-3UTR TCA 90 bp ACTGGCTCTATCCAAGTTTGGGATCCCGTGGTAGGGATCACCTTTCCAGGAACATGGATTGGGGGAGGTTaGACTGGCTCTATCCAAGTT +
Preference number: 4 (lower is better)
Translates to: TGSIQVWDPVVGITFPGTWIGGG*TGSIQV
Trigger: AACTTGGATAGAGCCAGTTCAACCTCCCCCAATCCA...TGTTCCTGGAAAGGTGATCCCTACCACGGGATCCCAAACTTGGATAGAGCCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
CDS-3UTR TCA 90 bp TTCATGCTCTCAAGAGAGAGAGAATCTGATCAGTCACTGGTCAGCTGTCCAAGTCCAGGCCCTGGGCTTTaGAATCGACCCTGGTTTGCA +
Preference number: 4 (lower is better)
Translates to: FMLSRERESDQSLVSCPSPGPGL*NRPWFA
Trigger: TGCAAACCAGGGTCGATTTCAAAGCCCAGGGCCTGG...ACTTGGACAGCTGACCAGTGACTGATCAGATTCTCTCTCTCTTGAGAGCATGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615958.4
CDS-3UTR GCA 90 bp GAAGGCCAGATTCTGAGGAATCAAAGGGGATTGTCATGGAAATGTGATGTGAGCGGCCTGGCCTGTACGTaGCTCTCCCTAACTCTGGAT +
Preference number: 4 (lower is better)
Translates to: EGQILRNQRGLSWKCDVSGLACT*LSLTLD
Trigger: ATCCAGAGTTAGGGAGAGGCACGTACAGGCCAGGCC...GCTCACATCACATTTCCATGACAATCCCCTTTGATTCCTCAGAATCTGGCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331161.9
ENST00000615958.4
CDS-3UTR CCA 90 bp GATTGGGGGAGGTTGAACTGGCTCTATCCAAGTTTGGGATCCCGTGGTAGGGATGAATGCCAGTTACAGTaGGTAGGGAAGAAGCAGCAT +
Preference number: 4 (lower is better)
Translates to: DWGRLNWLYPSLGSRGRDECQLQ*VGKKQH
Trigger: ATGCTGCTTCTTCCCTACCCACTGTAACTGGCATTC...ATCCCTACCACGGGATCCCAAACTTGGATAGAGCCAGTTCAACCTCCCCCAATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
CDS-3UTR CCA 90 bp GATTGGGGGAGGTTGAACTGGCTCTATCCAAGTTTGGGATCCCGTGGTAGGGATAAAAGGGCAGTTTTCTaGGTGGAGGGAACCATGTGT +
Preference number: 4 (lower is better)
Translates to: DWGRLNWLYPSLGSRGRDKRAVF*VEGTMC
Trigger: ACACATGGTTCCCTCCACCCAGAAAACTGCCCTTTT...ATCCCTACCACGGGATCCCAAACTTGGATAGAGCCAGTTCAACCTCCCCCAATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
CDS-3UTR TCA 90 bp GATTGGGGGAGGTTGAACTGGCTCTATCCAAGTTTGGGATCCCGTGGTAGGGATTCCATGGCCACCAAATaGCTCCTTAAAAGCTACTCT +
Preference number: 4 (lower is better)
Translates to: DWGRLNWLYPSLGSRGRDSMATK*LLKSYS
Trigger: AGAGTAGCTTTTAAGGAGTCATTTGGTGGCCATGGA...ATCCCTACCACGGGATCCCAAACTTGGATAGAGCCAGTTCAACCTCCCCCAATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331161.9
ENST00000496261.6
CDS-3UTR TCA 90 bp GGATCAGATGCATCCTACCCACTCTGTAAGTCTGGGTCCCTGAGTGACTGCAGAATTCCCATGACAGGATaGTCAGTCTTCAATGGCACA +
Preference number: 4 (lower is better)
Translates to: GSDASYPLCKSGSLSDCRIPMTG*SVFNGT
Trigger: TGTGCCATTGAAGACTGATCATCCTGTCATGGGAAT...TCTGCAGTCACTCAGGGACCCAGACTTACAGAGTGGGTAGGATGCATCTGATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331161.9
ENST00000615958.4
CDS-3UTR TCA 90 bp GGGAGGTTGAACTGGCTCTATCCAAGTTTGGGATCCCGTGGTAGGGATCACCTTGGCAACTCCCACTCATaGCTTCAAAGCATAATATCC +
Preference number: 4 (lower is better)
Translates to: GRLNWLYPSLGSRGRDHLGNSHS*LQSIIS
Trigger: GGATATTATGCTTTGAAGTCATGAGTGGGAGTTGCC...AAGGTGATCCCTACCACGGGATCCCAAACTTGGATAGAGCCAGTTCAACCTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331161.9
ENST00000615958.4
CDS-3UTR TCA 90 bp ACTGGCTCTATCCAAGTTTGGGATCCCGTGGTAGGGATCACCTTTCCAGGAACAAAGAGAGAGAGAATCTaGTCAGTCACTGGTCAGCTG +
Preference number: 4 (lower is better)
Translates to: TGSIQVWDPVVGITFPGTKRERI*SVTGQL
Trigger: CAGCTGACCAGTGACTGATCAGATTCTCTCTCTCTT...TGTTCCTGGAAAGGTGATCCCTACCACGGGATCCCAAACTTGGATAGAGCCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
CDS-3UTR CCA 90 bp GATTGGGGGAGGTTGAACTGGCTCTATCCAAGTTTGGGATCCCGTGGTAGGGATATGATCAGTCTTCAATaGCACAGCAGGCTTTTTGGG +
Preference number: 4 (lower is better)
Translates to: DWGRLNWLYPSLGSRGRDMISLQ*HSRLFG
Trigger: CCCAAAAAGCCTGCTGTGCCATTGAAGACTGATCAT...ATCCCTACCACGGGATCCCAAACTTGGATAGAGCCAGTTCAACCTCCCCCAATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
CDS-3UTR CCA 90 bp GGATCAGATGCATCCTACCCACTCTGTAAGTCTGGGTCCCTGAGTGACTGCAGAATGATCAGTCTTCAATaGCACAGCAGGCTTTTTGGG +
Preference number: 4 (lower is better)
Translates to: GSDASYPLCKSGSLSDCRMISLQ*HSRLFG
Trigger: CCCAAAAAGCCTGCTGTGCCATTGAAGACTGATCAT...TCTGCAGTCACTCAGGGACCCAGACTTACAGAGTGGGTAGGATGCATCTGATCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331161.9
ENST00000615958.4
CDS-3UTR CCA 90 bp GAAGGCCAGATTCTGAGGAATCAAAGGGGATTGTCATGGAAATGTGATGTGAGCGAAGTTCATAGGTGTTaGACACGTGTGGCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: EGQILRNQRGLSWKCDVSEVHRC*TRVARP
Trigger: GGGCCTGGCCACACGTGTCCAACACCTATGAACTTC...GCTCACATCACATTTCCATGACAATCCCCTTTGATTCCTCAGAATCTGGCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615958.4
CDS-3UTR TCA 90 bp TTCATGCTCTCAAGAGAGAGAGAATCTGATCAGTCACTGGTCAGCTGTCCAAGTGTGTCTACTCCCAAGTaGCTGCAGTCTCCATGTCTC +
Preference number: 4 (lower is better)
Translates to: FMLSRERESDQSLVSCPSVSTPK*LQSPCL
Trigger: GAGACATGGAGACTGCAGTCACTTGGGAGTAGACAC...ACTTGGACAGCTGACCAGTGACTGATCAGATTCTCTCTCTCTTGAGAGCATGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
CDS-3UTR TCA 90 bp ACTGGCTCTATCCAAGTTTGGGATCCCGTGGTAGGGATCACCTTTCCAGGAACACTTCATGCTCCGTGGTaGACAATCTCCATAAGAAGT +
Preference number: 4 (lower is better)
Translates to: TGSIQVWDPVVGITFPGTLHAPW*TISIRS
Trigger: ACTTCTTATGGAGATTGTTCACCACGGAGCATGAAG...TGTTCCTGGAAAGGTGATCCCTACCACGGGATCCCAAACTTGGATAGAGCCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615958.4
CDS-3UTR GCA 90 bp TACGTGCCTCTCCCTAACTCTGGATCAGATGCATCCTACCCACTCTGTAAGTCTTCAGTACTATGGGAATaGCAGTTACAGTGGGTAGGG +
Preference number: 4 (lower is better)
Translates to: YVPLPNSGSDASYPLCKSSVLWE*QLQWVG
Trigger: CCCTACCCACTGTAACTGGCATTCCCATAGTACTGA...AGACTTACAGAGTGGGTAGGATGCATCTGATCCAGAGTTAGGGAGAGGCACGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331161.9
ENST00000615958.4
CDS-3UTR GCA 90 bp AATCAAGCTAAAAAGATCATAGACAAGGGGCCAGACCACATCAAATCTTTATTCGCTCCTCCAGCCGCCTaGTCTGTTGGGTGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: NQAKKIIDKGPDHIKSLFAPPAA*SVGCSS
Trigger: GGAGCTGCACCCAACAGAGCAGGCGGCTGGAGGAGC...GAATAAAGATTTGATGTGGTCTGGCCCCTTGTCTATGATCTTTTTAGCTTGATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615958.4
CDS-3UTR CCA 90 bp GAAGGCCAGATTCTGAGGAATCAAAGGGGATTGTCATGGAAATGTGATGTGAGCATGTACCTAGGAGGCTaGGGAGGCTCCTTCAAGTCA +
Preference number: 4 (lower is better)
Translates to: EGQILRNQRGLSWKCDVSMYLGG*GGSFKS
Trigger: TGACTTGAAGGAGCCTCCCCAGCCTCCTAGGTACAT...GCTCACATCACATTTCCATGACAATCCCCTTTGATTCCTCAGAATCTGGCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331161.9
ENST00000496261.6
CDS-3UTR CCA 90 bp ACTGGCTCTATCCAAGTTTGGGATCCCGTGGTAGGGATCACCTTTCCAGGAACAAAGACCGAGAGGGACTaGAATTCTTTATGCACCTCT +
Preference number: 4 (lower is better)
Translates to: TGSIQVWDPVVGITFPGTKTERD*NSLCTS
Trigger: AGAGGTGCATAAAGAATTCCAGTCCCTCTCGGTCTT...TGTTCCTGGAAAGGTGATCCCTACCACGGGATCCCAAACTTGGATAGAGCCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
CDS-3UTR CCA 90 bp GAAGGCCAGATTCTGAGGAATCAAAGGGGATTGTCATGGAAATGTGATGTGAGCGGCTCTATCCAAGTTTaGGATCCCGTGGTAGGGATC +
Preference number: 4 (lower is better)
Translates to: EGQILRNQRGLSWKCDVSGSIQV*DPVVGI
Trigger: GATCCCTACCACGGGATCCCAAACTTGGATAGAGCC...GCTCACATCACATTTCCATGACAATCCCCTTTGATTCCTCAGAATCTGGCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
CDS-3UTR TCA 90 bp TTCATGCTCTCAAGAGAGAGAGAATCTGATCAGTCACTGGTCAGCTGTCCAAGTTTCTTCTTCGCCTTCTaGAGGACCACAGGTTCTCTC +
Preference number: 4 (lower is better)
Translates to: FMLSRERESDQSLVSCPSFFFAF*RTTGSL
Trigger: GAGAGAACCTGTGGTCCTTCAGAAGGCGAAGAAGAA...ACTTGGACAGCTGACCAGTGACTGATCAGATTCTCTCTCTCTTGAGAGCATGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331161.9
ENST00000496261.6
CDS-3UTR TCA 90 bp TACGTGCCTCTCCCTAACTCTGGATCAGATGCATCCTACCCACTCTGTAAGTCTCCTCTGAAGGCTCTGTaGAAGAAAGGCAACAATGTT +
Preference number: 4 (lower is better)
Translates to: YVPLPNSGSDASYPLCKSPLKAL*KKGNNV
Trigger: AACATTGTTGCCTTTCTTTCACAGAGCCTTCAGAGG...AGACTTACAGAGTGGGTAGGATGCATCTGATCCAGAGTTAGGGAGAGGCACGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331161.9
ENST00000615958.4
CDS-3UTR TCA 90 bp GGGAGGTTGAACTGGCTCTATCCAAGTTTGGGATCCCGTGGTAGGGATCACCTTATTGTCATGGAAATGTaGTGTGAGCTGATGAAGACT +
Preference number: 4 (lower is better)
Translates to: GRLNWLYPSLGSRGRDHLIVMEM*CELMKT
Trigger: AGTCTTCATCAGCTCACATCACATTTCCATGACAAT...AAGGTGATCCCTACCACGGGATCCCAAACTTGGATAGAGCCAGTTCAACCTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
CDS-3UTR TCA 90 bp TCATGCTCTCAAGAGAGAGAGAATCTGATCAGTCACTGGTCAGCTGTCCAAGTCAGGAAGGCCAGATTCTaGGGAATCAAAGGGGATTGT +
Preference number: 4 (lower is better)
Translates to: SCSQERENLISHWSAVQVRKARF*GIKGDC
Trigger: ACAATCCCCTTTGATTCCTCAGAATCTGGCCTTCCT...GACTTGGACAGCTGACCAGTGACTGATCAGATTCTCTCTCTCTTGAGAGCATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
CDS-3UTR TCA 90 bp TACGTGCCTCTCCCTAACTCTGGATCAGATGCATCCTACCCACTCTGTAAGTCTGAGTCATTCTCTTCTTaGGCAAGTAGGACTTGTTGC +
Preference number: 4 (lower is better)
Translates to: YVPLPNSGSDASYPLCKSESFSS*ASRTCC
Trigger: GCAACAAGTCCTACTTGCTCAAGAAGAGAATGACTC...AGACTTACAGAGTGGGTAGGATGCATCTGATCCAGAGTTAGGGAGAGGCACGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615958.4
CDS-3UTR CCA 90 bp TCATGCTCTCAAGAGAGAGAGAATCTGATCAGTCACTGGTCAGCTGTCCAAGTCCAGAGAAAGACTGCCTaGATCAACAGAGTCACCAGA +
Preference number: 4 (lower is better)
Translates to: SCSQERENLISHWSAVQVQRKTA*INRVTR
Trigger: TCTGGTGACTCTGTTGATCCAGGCAGTCTTTCTCTG...GACTTGGACAGCTGACCAGTGACTGATCAGATTCTCTCTCTCTTGAGAGCATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331161.9
ENST00000615958.4
CDS-3UTR CCA 90 bp GAAGGCCAGATTCTGAGGAATCAAAGGGGATTGTCATGGAAATGTGATGTGAGCTGGGGGAGGTTGAACTaGCTCTATCCAAGTTTGGGA +
Preference number: 4 (lower is better)
Translates to: EGQILRNQRGLSWKCDVSWGRLN*LYPSLG
Trigger: TCCCAAACTTGGATAGAGCCAGTTCAACCTCCCCCA...GCTCACATCACATTTCCATGACAATCCCCTTTGATTCCTCAGAATCTGGCCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
CDS-3UTR CCA 90 bp TTTTTAGTTTCAGGTGTCTACTCCCAAGTGACTGCAGTCTCCATGTCTCTTAATAGCCGCCTGCTCTGTTaGGTGCAGCTCCTTCTGTTC +
Preference number: 4 (lower is better)
Translates to: FLVSGVYSQVTAVSMSLNSRLLC*VQLLLF
Trigger: GAACAGAAGGAGCTGCACCCAACAGAGCAGGCGGCT...ATTAAGAGACATGGAGACTGCAGTCACTTGGGAGTAGACACCTGAAACTAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615958.4
CDS-3UTR TCA 90 bp TCATGCTCTCAAGAGAGAGAGAATCTGATCAGTCACTGGTCAGCTGTCCAAGTCCACTCTGTATTCCCATaGCAGGATGATCAGTCTTCA +
Preference number: 4 (lower is better)
Translates to: SCSQERENLISHWSAVQVHSVFP*QDDQSS
Trigger: TGAAGACTGATCATCCTGTCATGGGAATACAGAGTG...GACTTGGACAGCTGACCAGTGACTGATCAGATTCTCTCTCTCTTGAGAGCATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
CDS-3UTR TCA 90 bp GGGAGGTTGAACTGGCTCTATCCAAGTTTGGGATCCCGTGGTAGGGATCACCTTCAGTGTTACGAATACTaGAAATATTTCTCACTGGGA +
Preference number: 4 (lower is better)
Translates to: GRLNWLYPSLGSRGRDHLQCYEY*KYFSLG
Trigger: TCCCAGTGAGAAATATTTTCAGTATTCGTAACACTG...AAGGTGATCCCTACCACGGGATCCCAAACTTGGATAGAGCCAGTTCAACCTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331161.9
ENST00000615958.4
CDS-3UTR TCA 90 bp TCCCAAGTGACTGCAGTCTCCATGTCTCTTAATTCATGCTCTCAAGAGAGAGAGAAGAGAGAGAGAATCTaGTCAGTCACTGGTCAGCTG +
Preference number: 4 (lower is better)
Translates to: SQVTAVSMSLNSCSQEREKRERI*SVTGQL
Trigger: CAGCTGACCAGTGACTGATCAGATTCTCTCTCTCTT...CTCTCTCTCTTGAGAGCATGAATTAAGAGACATGGAGACTGCAGTCACTTGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
CDS-3UTR TCA 90 bp GAAGGCCAGATTCTGAGGAATCAAAGGGGATTGTCATGGAAATGTGATGTGAGCTTGCAGCTATATGGTTaGTGCTGCCAGACACATCCA +
Preference number: 4 (lower is better)
Translates to: EGQILRNQRGLSWKCDVSLQLYG*CCQTHP
Trigger: TGGATGTGTCTGGCAGCATCAACCATATAGCTGCAA...GCTCACATCACATTTCCATGACAATCCCCTTTGATTCCTCAGAATCTGGCCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615958.4
CDS-3UTR GCA 90 bp ACAATACAATATGACCAGTGCTATAAAGGAAGGCCAGATTCTGAGGAATCAAAGGGCCTGGCCTGTACGTaGCTCTCCCTAACTCTGGAT +
Preference number: 4 (lower is better)
Translates to: TIQYDQCYKGRPDSEESKGLACT*LSLTLD
Trigger: ATCCAGAGTTAGGGAGAGGCACGTACAGGCCAGGCC...CTTTGATTCCTCAGAATCTGGCCTTCCTTTATAGCACTGGTCATATTGTATTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331161.9
ENST00000615958.4
CDS-3UTR CCA 90 bp GGATCAGATGCATCCTACCCACTCTGTAAGTCTGGGTCCCTGAGTGACTGCAGACGTAATTATACATTTTaGAGTGTACTGTCACAGCTG +
Preference number: 4 (lower is better)
Translates to: GSDASYPLCKSGSLSDCRRNYTF*SVLSQL
Trigger: CAGCTGTGACAGTACACTCCAAAATGTATAATTACG...TCTGCAGTCACTCAGGGACCCAGACTTACAGAGTGGGTAGGATGCATCTGATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331161.9
ENST00000615958.4
CDS-3UTR TCA 90 bp TACGTGCCTCTCCCTAACTCTGGATCAGATGCATCCTACCCACTCTGTAAGTCTTTTTGGGTGATAGGATaGCCTAGGTATGTATGTGTA +
Preference number: 4 (lower is better)
Translates to: YVPLPNSGSDASYPLCKSFWVIG*PRYVCV
Trigger: TACACATACATACCTAGGTCATCCTATCACCCAAAA...AGACTTACAGAGTGGGTAGGATGCATCTGATCCAGAGTTAGGGAGAGGCACGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331161.9
ENST00000615958.4
CDS-3UTR GCA 90 bp CTAAGGAATGCAGATGAAAATGTATACAGTGTCTTCTCCCCCATAAGCTTGAAAGGGTCCCTGAGTGACTaGAGAAAAGGGTTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: LRNADENVYSVFSPISLKGSLSD*RKGFLL
Trigger: CAGCAGGAACCCTTTTCTGCAGTCACTCAGGGACCC...TTTCAAGCTTATGGGGGAGAAGACACTGTATACATTTTCATCTGCATTCCTTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000331161.9
ENST00000615958.4
CDS-3UTR GCA 90 bp ACAATACAATATGACCAGTGCTATAAAGGAAGGCCAGATTCTGAGGAATCAAAGGGGTCCCTGAGTGACTaGAGAAAAGGGTTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: TIQYDQCYKGRPDSEESKGSLSD*RKGFLL
Trigger: CAGCAGGAACCCTTTTCTGCAGTCACTCAGGGACCC...CTTTGATTCCTCAGAATCTGGCCTTCCTTTATAGCACTGGTCATATTGTATTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331161.9
ENST00000615958.4
CDS-3UTR GCA 90 bp TCCCAAGTGACTGCAGTCTCCATGTCTCTTAATTCATGCTCTCAAGAGAGAGAGCAAACGGGAATGATATaGATCATTTCTAGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: SQVTAVSMSLNSCSQEREQTGMI*IISRPG
Trigger: GCCAGGCCTAGAAATGATGCATATCATTCCCGTTTG...CTCTCTCTCTTGAGAGCATGAATTAAGAGACATGGAGACTGCAGTCACTTGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331161.9
ENST00000615958.4
CDS-3UTR GCA 90 bp GATTGGGGGAGGTTGAACTGGCTCTATCCAAGTTTGGGATCCCGTGGTAGGGATCCAAGTCAAACTAGCTaGATAATGAAGTTTGACTTT +
Preference number: 4 (lower is better)
Translates to: DWGRLNWLYPSLGSRGRDPSQTS*IMKFDF
Trigger: AAAGTCAAACTTCATTATGCAGCTAGTTTGACTTGG...ATCCCTACCACGGGATCCCAAACTTGGATAGAGCCAGTTCAACCTCCCCCAATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
CDS-3UTR CCA 90 bp GAAGGCCAGATTCTGAGGAATCAAAGGGGATTGTCATGGAAATGTGATGTGAGCAAGACCGAGAGGGACTaGAATTCTTTATGCACCTCT +
Preference number: 4 (lower is better)
Translates to: EGQILRNQRGLSWKCDVSKTERD*NSLCTS
Trigger: AGAGGTGCATAAAGAATTCCAGTCCCTCTCGGTCTT...GCTCACATCACATTTCCATGACAATCCCCTTTGATTCCTCAGAATCTGGCCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
CDS-3UTR CCA 90 bp ACTGGCTCTATCCAAGTTTGGGATCCCGTGGTAGGGATCACCTTTCCAGGAACACATCTTTTGCATTTGTaGAGCTCAGAAACAATGTGT +
Preference number: 4 (lower is better)
Translates to: TGSIQVWDPVVGITFPGTHLLHL*SSETMC
Trigger: ACACATTGTTTCTGAGCTCCACAAATGCAAAAGATG...TGTTCCTGGAAAGGTGATCCCTACCACGGGATCCCAAACTTGGATAGAGCCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
CDS-3UTR CCA 90 bp AGCTGCATAATGAAGTTTGACTTTTTAGTTTCAGGTGTCTACTCCCAAGTGACTGGGCAGTTTTCTGGGTaGAGGGAACCATGTGTGCAG +
Preference number: 4 (lower is better)
Translates to: SCIMKFDFLVSGVYSQVTGQFSG*REPCVQ
Trigger: CTGCACACATGGTTCCCTCCACCCAGAAAACTGCCC...AGTCACTTGGGAGTAGACACCTGAAACTAAAAAGTCAAACTTCATTATGCAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
CDS-3UTR CCA 90 bp TTCATGCTCTCAAGAGAGAGAGAATCTGATCAGTCACTGGTCAGCTGTCCAAGTTGGTTTGCAGCTATATaGTTGATGCTGCCAGACACA +
Preference number: 4 (lower is better)
Translates to: FMLSRERESDQSLVSCPSWFAAI*LMLPDT
Trigger: TGTGTCTGGCAGCATCAACCATATAGCTGCAAACCA...ACTTGGACAGCTGACCAGTGACTGATCAGATTCTCTCTCTCTTGAGAGCATGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615958.4
CDS-3UTR TCA 90 bp GAAGGCCAGATTCTGAGGAATCAAAGGGGATTGTCATGGAAATGTGATGTGAGCTCAAGTCACTGGGTATaGGGTTATAAATGCACTCAG +
Preference number: 4 (lower is better)
Translates to: EGQILRNQRGLSWKCDVSSSHWV*GYKCTQ
Trigger: CTGAGTGCATTTATAACCTCATACCCAGTGACTTGA...GCTCACATCACATTTCCATGACAATCCCCTTTGATTCCTCAGAATCTGGCCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331161.9
ENST00000496261.6
CDS-3UTR TCA 90 bp TACGTGCCTCTCCCTAACTCTGGATCAGATGCATCCTACCCACTCTGTAAGTCTCAAATTCTGTGTTTGTaGAAAAAGCCTGAAAGACTC +
Preference number: 4 (lower is better)
Translates to: YVPLPNSGSDASYPLCKSQILCL*KKPERL
Trigger: GAGTCTTTCAGGCTTTTTTCACAAACACAGAATTTG...AGACTTACAGAGTGGGTAGGATGCATCTGATCCAGAGTTAGGGAGAGGCACGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331161.9
ENST00000615958.4
CDS-3UTR TCA 90 bp ATTCTAAGGAATGCAGATGAAAATGTATACAGTGTCTTCTCCCCCATAAGCTTGGTAAGTCTGGGTCCCTaGGTGACTGCAGAAAAGGGT +
Preference number: 4 (lower is better)
Translates to: ILRNADENVYSVFSPISLVSLGP*VTAEKG
Trigger: ACCCTTTTCTGCAGTCACTCAGGGACCCAGACTTAC...CAAGCTTATGGGGGAGAAGACACTGTATACATTTTCATCTGCATTCCTTAGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000331161.9
ENST00000615958.4
CDS-3UTR TCA 90 bp AGCTGCATAATGAAGTTTGACTTTTTAGTTTCAGGTGTCTACTCCCAAGTGACTGACTGGGTCCCTGAGTaGCTGCATGGAACAGACTTA +
Preference number: 4 (lower is better)
Translates to: SCIMKFDFLVSGVYSQVTDWVPE*LHGTDL
Trigger: TAAGTCTGTTCCATGCAGTCACTCAGGGACCCAGTC...AGTCACTTGGGAGTAGACACCTGAAACTAAAAAGTCAAACTTCATTATGCAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331161.9
ENST00000615958.4
CDS-3UTR TCA 90 bp CAATACAATATGACCAGTGCTATAAAGGAAGGCCAGATTCTGAGGAATCAAAGGTGGATTGGGGGAGGTTaGACTGGCTCTATCCAAGTT +
Preference number: 4 (lower is better)
Translates to: QYNMTSAIKEGQILRNQRWIGGG*TGSIQV
Trigger: AACTTGGATAGAGCCAGTTCAACCTCCCCCAATCCA...CCTTTGATTCCTCAGAATCTGGCCTTCCTTTATAGCACTGGTCATATTGTATTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
CDS-3UTR TCA 90 bp ATTCTAAGGAATGCAGATGAAAATGTATACAGTGTCTTCTCCCCCATAAGCTTGGTGTCTACTCCCAAGTaGCTGCAGTCTCCATGTCTC +
Preference number: 4 (lower is better)
Translates to: ILRNADENVYSVFSPISLVSTPK*LQSPCL
Trigger: GAGACATGGAGACTGCAGTCACTTGGGAGTAGACAC...CAAGCTTATGGGGGAGAAGACACTGTATACATTTTCATCTGCATTCCTTAGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
CDS-3UTR GCA 90 bp AGCTGCATAATGAAGTTTGACTTTTTAGTTTCAGGTGTCTACTCCCAAGTGACTGGGTTCCTGCTGACCTaGTCACAGCAAAGTACTGCT +
Preference number: 4 (lower is better)
Translates to: SCIMKFDFLVSGVYSQVTGFLLT*SQQSTA
Trigger: AGCAGTACTTTGCTGTGAGCAGGTCAGCAGGAACCC...AGTCACTTGGGAGTAGACACCTGAAACTAAAAAGTCAAACTTCATTATGCAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331161.9
ENST00000615958.4
CDS-3UTR GCA 90 bp GAAGGCCAGATTCTGAGGAATCAAAGGGGATTGTCATGGAAATGTGATGTGAGCGCAAGTAGGACTTGTTaGTCTCTTGTCACTTTTCCA +
Preference number: 4 (lower is better)
Translates to: EGQILRNQRGLSWKCDVSASRTC*SLVTFP
Trigger: TGGAAAAGTGACAAGAGAGCAACAAGTCCTACTTGC...GCTCACATCACATTTCCATGACAATCCCCTTTGATTCCTCAGAATCTGGCCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615958.4
CDS-3UTR GCA 90 bp ACAATACAATATGACCAGTGCTATAAAGGAAGGCCAGATTCTGAGGAATCAAAGCCCGCTCTGTCTTCATaGTCCGTGGTGAACAATCTC +
Preference number: 4 (lower is better)
Translates to: TIQYDQCYKGRPDSEESKPALSS*SVVNNL
Trigger: GAGATTGTTCACCACGGAGCATGAAGACAGAGCGGG...CTTTGATTCCTCAGAATCTGGCCTTCCTTTATAGCACTGGTCATATTGTATTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615958.4
CDS-3UTR CCA 90 bp TCATGCTCTCAAGAGAGAGAGAATCTGATCAGTCACTGGTCAGCTGTCCAAGTCTCAAAGTTGTGCTGTTaGTATCATGCGTTATTGGCA +
Preference number: 4 (lower is better)
Translates to: SCSQERENLISHWSAVQVSKLCC*YHALLA
Trigger: TGCCAATAACGCATGATACCAACAGCACAACTTTGA...GACTTGGACAGCTGACCAGTGACTGATCAGATTCTCTCTCTCTTGAGAGCATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
CDS-3UTR CCA 90 bp AGCTGCATAATGAAGTTTGACTTTTTAGTTTCAGGTGTCTACTCCCAAGTGACTGGCTCTATCCAAGTTTaGGATCCCGTGGTAGGGATC +
Preference number: 4 (lower is better)
Translates to: SCIMKFDFLVSGVYSQVTGSIQV*DPVVGI
Trigger: GATCCCTACCACGGGATCCCAAACTTGGATAGAGCC...AGTCACTTGGGAGTAGACACCTGAAACTAAAAAGTCAAACTTCATTATGCAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
CDS-3UTR CCA 90 bp TTTGACTTTTTAGTTTCAGGTGTCTACTCCCAAGTGACTGCAGTCTCCATGTCTGAATGCCAGTTACAGTaGGTAGGGAAGAAGCAGCAT +
Preference number: 4 (lower is better)
Translates to: FDFLVSGVYSQVTAVSMSECQLQ*VGKKQH
Trigger: ATGCTGCTTCTTCCCTACCCACTGTAACTGGCATTC...AGACATGGAGACTGCAGTCACTTGGGAGTAGACACCTGAAACTAAAAAGTCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
CDS-3UTR TCA 90 bp CAAATAACCAGATATGCACAATACAATATGACCAGTGCTATAAAGGAAGGCCAGTTCTTCTTCGCCTTCTaGAGGACCACAGGTTCTCTC +
Preference number: 4 (lower is better)
Translates to: QITRYAQYNMTSAIKEGQFFFAF*RTTGSL
Trigger: GAGAGAACCTGTGGTCCTTCAGAAGGCGAAGAAGAA...CTGGCCTTCCTTTATAGCACTGGTCATATTGTATTGTGCATATCTGGTTATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331161.9
ENST00000496261.6
CDS-3UTR TCA 90 bp TTTGACTTTTTAGTTTCAGGTGTCTACTCCCAAGTGACTGCAGTCTCCATGTCTTCCATGGCCACCAAATaGCTCCTTAAAAGCTACTCT +
Preference number: 4 (lower is better)
Translates to: FDFLVSGVYSQVTAVSMSSMATK*LLKSYS
Trigger: AGAGTAGCTTTTAAGGAGTCATTTGGTGGCCATGGA...AGACATGGAGACTGCAGTCACTTGGGAGTAGACACCTGAAACTAAAAAGTCAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331161.9
ENST00000496261.6
CDS-3UTR TCA 90 bp TTTGACTTTTTAGTTTCAGGTGTCTACTCCCAAGTGACTGCAGTCTCCATGTCTATTCCCATGACAGGATaGTCAGTCTTCAATGGCACA +
Preference number: 4 (lower is better)
Translates to: FDFLVSGVYSQVTAVSMSIPMTG*SVFNGT
Trigger: TGTGCCATTGAAGACTGATCATCCTGTCATGGGAAT...AGACATGGAGACTGCAGTCACTTGGGAGTAGACACCTGAAACTAAAAAGTCAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
CDS-3UTR TCA 90 bp CTAAGGAATGCAGATGAAAATGTATACAGTGTCTTCTCCCCCATAAGCTTGAAAGAAAAGGGTTCCTGCTaGCCTGCTCACAGCAAAGTA +
Preference number: 4 (lower is better)
Translates to: LRNADENVYSVFSPISLKEKGSC*PAHSKV
Trigger: TACTTTGCTGTGAGCAGGTCAGCAGGAACCCTTTTC...TTTCAAGCTTATGGGGGAGAAGACACTGTATACATTTTCATCTGCATTCCTTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000331161.9
ENST00000615958.4
CDS-3UTR TCA 90 bp ACAATACAATATGACCAGTGCTATAAAGGAAGGCCAGATTCTGAGGAATCAAAGGAAAAGGGTTCCTGCTaGCCTGCTCACAGCAAAGTA +
Preference number: 4 (lower is better)
Translates to: TIQYDQCYKGRPDSEESKEKGSC*PAHSKV
Trigger: TACTTTGCTGTGAGCAGGTCAGCAGGAACCCTTTTC...CTTTGATTCCTCAGAATCTGGCCTTCCTTTATAGCACTGGTCATATTGTATTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331161.9
ENST00000615958.4
CDS-3UTR TCA 90 bp TTCATGCTCTCAAGAGAGAGAGAATCTGATCAGTCACTGGTCAGCTGTCCAAGTTTTTGGGTGATAGGATaGCCTAGGTATGTATGTGTA +
Preference number: 4 (lower is better)
Translates to: FMLSRERESDQSLVSCPSFWVIG*PRYVCV
Trigger: TACACATACATACCTAGGTCATCCTATCACCCAAAA...ACTTGGACAGCTGACCAGTGACTGATCAGATTCTCTCTCTCTTGAGAGCATGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
CDS-3UTR TCA 90 bp TTTTTAGTTTCAGGTGTCTACTCCCAAGTGACTGCAGTCTCCATGTCTCTTAATAGGAAGGCCAGATTCTaGGGAATCAAAGGGGATTGT +
Preference number: 4 (lower is better)
Translates to: FLVSGVYSQVTAVSMSLNRKARF*GIKGDC
Trigger: ACAATCCCCTTTGATTCCTCAGAATCTGGCCTTCCT...ATTAAGAGACATGGAGACTGCAGTCACTTGGGAGTAGACACCTGAAACTAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
CDS-3UTR GCA 90 bp ACAATACAATATGACCAGTGCTATAAAGGAAGGCCAGATTCTGAGGAATCAAAGGGGTCCCTGAGTGACTaGATGGAACAGACTTATACC +
Preference number: 4 (lower is better)
Translates to: TIQYDQCYKGRPDSEESKGSLSD*MEQTYT
Trigger: GGTATAAGTCTGTTCCATGCAGTCACTCAGGGACCC...CTTTGATTCCTCAGAATCTGGCCTTCCTTTATAGCACTGGTCATATTGTATTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331161.9
ENST00000615958.4
CDS-3UTR GCA 90 bp ATTCTAAGGAATGCAGATGAAAATGTATACAGTGTCTTCTCCCCCATAAGCTTGGGGTCCCTGAGTGACTaGATGGAACAGACTTATACC +
Preference number: 4 (lower is better)
Translates to: ILRNADENVYSVFSPISLGSLSD*MEQTYT
Trigger: GGTATAAGTCTGTTCCATGCAGTCACTCAGGGACCC...CAAGCTTATGGGGGAGAAGACACTGTATACATTTTCATCTGCATTCCTTAGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000331161.9
ENST00000615958.4
CDS-3UTR GCA 90 bp CAATACAATATGACCAGTGCTATAAAGGAAGGCCAGATTCTGAGGAATCAAAGGTCAGTACTATGGGAATaGCAGTTACAGTGGGTAGGG +
Preference number: 4 (lower is better)
Translates to: QYNMTSAIKEGQILRNQRSVLWE*QLQWVG
Trigger: CCCTACCCACTGTAACTGGCATTCCCATAGTACTGA...CCTTTGATTCCTCAGAATCTGGCCTTCCTTTATAGCACTGGTCATATTGTATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
CDS-3UTR CCA 90 bp AATCAAGCTAAAAAGATCATAGACAAGGGGCCAGACCACATCAAATCTTTATTCATGTACCTAGGAGGCTaGGGAGGCTCCTTCAAGTCA +
Preference number: 4 (lower is better)
Translates to: NQAKKIIDKGPDHIKSLFMYLGG*GGSFKS
Trigger: TGACTTGAAGGAGCCTCCCCAGCCTCCTAGGTACAT...GAATAAAGATTTGATGTGGTCTGGCCCCTTGTCTATGATCTTTTTAGCTTGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331161.9
ENST00000496261.6
CDS-3UTR CCA 90 bp TCATGCTCTCAAGAGAGAGAGAATCTGATCAGTCACTGGTCAGCTGTCCAAGTCTACTTCAACTTTTGCTaGTCCCATAGTTTTCATTGC +
Preference number: 4 (lower is better)
Translates to: SCSQERENLISHWSAVQVYFNFC*SHSFHC
Trigger: GCAATGAAAACTATGGGACCAGCAAAAGTTGAAGTA...GACTTGGACAGCTGACCAGTGACTGATCAGATTCTCTCTCTCTTGAGAGCATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331161.9
ENST00000496261.6
CDS-3UTR CCA 90 bp TCATGCTCTCAAGAGAGAGAGAATCTGATCAGTCACTGGTCAGCTGTCCAAGTCCATCTTTTGCATTTGTaGAGCTCAGAAACAATGTGT +
Preference number: 4 (lower is better)
Translates to: SCSQERENLISHWSAVQVHLLHL*SSETMC
Trigger: ACACATTGTTTCTGAGCTCCACAAATGCAAAAGATG...GACTTGGACAGCTGACCAGTGACTGATCAGATTCTCTCTCTCTTGAGAGCATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
CDS-3UTR CCA 90 bp ATTCTAAGGAATGCAGATGAAAATGTATACAGTGTCTTCTCCCCCATAAGCTTGTGGGGGAGGTTGAACTaGCTCTATCCAAGTTTGGGA +
Preference number: 4 (lower is better)
Translates to: ILRNADENVYSVFSPISLWGRLN*LYPSLG
Trigger: TCCCAAACTTGGATAGAGCCAGTTCAACCTCCCCCA...CAAGCTTATGGGGGAGAAGACACTGTATACATTTTCATCTGCATTCCTTAGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
CDS-3UTR CCA 90 bp AAAAAGATCATAGACAAGGGGCCAGACCACATCAAATCTTTATTCTACCCATTCTGGGGGAGGTTGAACTaGCTCTATCCAAGTTTGGGA +
Preference number: 4 (lower is better)
Translates to: KKIIDKGPDHIKSLFYPFWGRLN*LYPSLG
Trigger: TCCCAAACTTGGATAGAGCCAGTTCAACCTCCCCCA...GAATGGGTAGAATAAAGATTTGATGTGGTCTGGCCCCTTGTCTATGATCTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
CDS-3UTR TCA 90 bp TTCATGCTCTCAAGAGAGAGAGAATCTGATCAGTCACTGGTCAGCTGTCCAAGTCAAATTCTGTGTTTGTaGAAAAAGCCTGAAAGACTC +
Preference number: 4 (lower is better)
Translates to: FMLSRERESDQSLVSCPSQILCL*KKPERL
Trigger: GAGTCTTTCAGGCTTTTTTCACAAACACAGAATTTG...ACTTGGACAGCTGACCAGTGACTGATCAGATTCTCTCTCTCTTGAGAGCATGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331161.9
ENST00000615958.4
CDS-3UTR TCA 90 bp CTAAGGAATGCAGATGAAAATGTATACAGTGTCTTCTCCCCCATAAGCTTGAAAAAGAGAGAGAGAATCTaGTCAGTCACTGGTCAGCTG +
Preference number: 4 (lower is better)
Translates to: LRNADENVYSVFSPISLKKRERI*SVTGQL
Trigger: CAGCTGACCAGTGACTGATCAGATTCTCTCTCTCTT...TTTCAAGCTTATGGGGGAGAAGACACTGTATACATTTTCATCTGCATTCCTTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
CDS-3UTR TCA 90 bp AGCTGCATAATGAAGTTTGACTTTTTAGTTTCAGGTGTCTACTCCCAAGTGACTAGGAAGGCCAGATTCTaGGGAATCAAAGGGGATTGT +
Preference number: 4 (lower is better)
Translates to: SCIMKFDFLVSGVYSQVTRKARF*GIKGDC
Trigger: ACAATCCCCTTTGATTCCTCAGAATCTGGCCTTCCT...AGTCACTTGGGAGTAGACACCTGAAACTAAAAAGTCAAACTTCATTATGCAGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
CDS-3UTR GCA 90 bp ACAATACAATATGACCAGTGCTATAAAGGAAGGCCAGATTCTGAGGAATCAAAGTCTTCTTCCAGCCTCTaGTTGCGGATCTTCTTTGGT +
Preference number: 4 (lower is better)
Translates to: TIQYDQCYKGRPDSEESKSSSSL*LRIFFG
Trigger: ACCAAAGAAGATCCGCAAGCAGAGGCTGGAAGAAGA...CTTTGATTCCTCAGAATCTGGCCTTCCTTTATAGCACTGGTCATATTGTATTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
CDS-3UTR GCA 90 bp GAAGGCCAGATTCTGAGGAATCAAAGGGGATTGTCATGGAAATGTGATGTGAGCCAGTTTTCAAAGTTGTaGTGTTGGTATCATGCGTTA +
Preference number: 4 (lower is better)
Translates to: EGQILRNQRGLSWKCDVSQFSKL*CWYHAL
Trigger: TAACGCATGATACCAACAGCACAACTTTGAAAACTG...GCTCACATCACATTTCCATGACAATCCCCTTTGATTCCTCAGAATCTGGCCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
CDS-3UTR GCA 90 bp TCATGCTCTCAAGAGAGAGAGAATCTGATCAGTCACTGGTCAGCTGTCCAAGTCGGAAAATACATCTTTTaGATTTGTGGAGCTCAGAAA +
Preference number: 4 (lower is better)
Translates to: SCSQERENLISHWSAVQVGKYIF*ICGAQK
Trigger: TTTCTGAGCTCCACAAATGCAAAAGATGTATTTTCC...GACTTGGACAGCTGACCAGTGACTGATCAGATTCTCTCTCTCTTGAGAGCATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
CDS-3UTR GCA 90 bp ATTCTAAGGAATGCAGATGAAAATGTATACAGTGTCTTCTCCCCCATAAGCTTGTTGGCAGAGAAAGACTaGCTGGATCAACAGAGTCAC +
Preference number: 4 (lower is better)
Translates to: ILRNADENVYSVFSPISLLAEKD*LDQQSH
Trigger: GTGACTCTGTTGATCCAGGCAGTCTTTCTCTGCCAA...CAAGCTTATGGGGGAGAAGACACTGTATACATTTTCATCTGCATTCCTTAGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331161.9
ENST00000615958.4
CDS-3UTR GCA 90 bp CTAAGGAATGCAGATGAAAATGTATACAGTGTCTTCTCCCCCATAAGCTTGAAATTGGCAGAGAAAGACTaGCTGGATCAACAGAGTCAC +
Preference number: 4 (lower is better)
Translates to: LRNADENVYSVFSPISLKLAEKD*LDQQSH
Trigger: GTGACTCTGTTGATCCAGGCAGTCTTTCTCTGCCAA...TTTCAAGCTTATGGGGGAGAAGACACTGTATACATTTTCATCTGCATTCCTTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331161.9
ENST00000615958.4
CDS-3UTR GCA 90 bp ACAATACAATATGACCAGTGCTATAAAGGAAGGCCAGATTCTGAGGAATCAAAGTCAGTACTATGGGAATaGCAGTTACAGTGGGTAGGG +
Preference number: 4 (lower is better)
Translates to: TIQYDQCYKGRPDSEESKSVLWE*QLQWVG
Trigger: CCCTACCCACTGTAACTGGCATTCCCATAGTACTGA...CTTTGATTCCTCAGAATCTGGCCTTCCTTTATAGCACTGGTCATATTGTATTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
CDS-3UTR GCA 90 bp TCATGCTCTCAAGAGAGAGAGAATCTGATCAGTCACTGGTCAGCTGTCCAAGTCGCAAATAACCAGATATaGACAATACAATATGACCAG +
Preference number: 4 (lower is better)
Translates to: SCSQERENLISHWSAVQVANNQI*TIQYDQ
Trigger: CTGGTCATATTGTATTGTGCATATCTGGTTATTTGC...GACTTGGACAGCTGACCAGTGACTGATCAGATTCTCTCTCTCTTGAGAGCATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
CDS-3UTR GCA 90 bp CTAAGGAATGCAGATGAAAATGTATACAGTGTCTTCTCCCCCATAAGCTTGAAAAGGCTTGGGAATAACTaGAAATGTCATGGGCCACAG +
Preference number: 4 (lower is better)
Translates to: LRNADENVYSVFSPISLKRLGNN*KCHGPQ
Trigger: CTGTGGCCCATGACATTTGCAGTTATTCCCAAGCCT...TTTCAAGCTTATGGGGGAGAAGACACTGTATACATTTTCATCTGCATTCCTTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000496261.6
CDS-3UTR CCA 90 bp TCCCAAGTGACTGCAGTCTCCATGTCTCTTAATTCATGCTCTCAAGAGAGAGAGTACTTCAACTTTTGCTaGTCCCATAGTTTTCATTGC +
Preference number: 4 (lower is better)
Translates to: SQVTAVSMSLNSCSQEREYFNFC*SHSFHC
Trigger: GCAATGAAAACTATGGGACCAGCAAAAGTTGAAGTA...CTCTCTCTCTTGAGAGCATGAATTAAGAGACATGGAGACTGCAGTCACTTGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331161.9
ENST00000496261.6
CDS-3UTR CCA 90 bp ATACATCTTTTGCATTTGTGGAGCTCAGAAACAATGTGTTGGAGACAGTTTAGAGCACAGCAGGCTTTTTaGGCACGTTCCGATCAAAGT +
Preference number: 4 (lower is better)
Translates to: IHLLHLWSSETMCWRQFRAQQAF*ARSDQS
Trigger: ACTTTGATCGGAACGTGCCCAAAAAGCCTGCTGTGC...TCTAAACTGTCTCCAACACATTGTTTCTGAGCTCCACAAATGCAAAAGATGTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
CDS-3UTR CCA 90 bp TCCCAAGTGACTGCAGTCTCCATGTCTCTTAATTCATGCTCTCAAGAGAGAGAGTCAGAAACAATGTGTTaGAGACAGTTTAGAGTAGCA +
Preference number: 4 (lower is better)
Translates to: SQVTAVSMSLNSCSQERESETMC*RQFRVA
Trigger: TGCTACTCTAAACTGTCTCCAACACATTGTTTCTGA...CTCTCTCTCTTGAGAGCATGAATTAAGAGACATGGAGACTGCAGTCACTTGGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
CDS-3UTR CCA 90 bp GAAGGCCAGATTCTGAGGAATCAAAGGGGATTGTCATGGAAATGTGATGTGAGCCGTAATTATACATTTTaGAGTGTACTGTCACAGCTG +
Preference number: 4 (lower is better)
Translates to: EGQILRNQRGLSWKCDVSRNYTF*SVLSQL
Trigger: CAGCTGTGACAGTACACTCCAAAATGTATAATTACG...GCTCACATCACATTTCCATGACAATCCCCTTTGATTCCTCAGAATCTGGCCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331161.9
ENST00000615958.4
CDS-3UTR CCA 90 bp ACAATACAATATGACCAGTGCTATAAAGGAAGGCCAGATTCTGAGGAATCAAAGAAAAGGGCAGTTTTCTaGGTGGAGGGAACCATGTGT +
Preference number: 4 (lower is better)
Translates to: TIQYDQCYKGRPDSEESKKRAVF*VEGTMC
Trigger: ACACATGGTTCCCTCCACCCAGAAAACTGCCCTTTT...CTTTGATTCCTCAGAATCTGGCCTTCCTTTATAGCACTGGTCATATTGTATTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
CDS-3UTR CCA 90 bp ATTCTAAGGAATGCAGATGAAAATGTATACAGTGTCTTCTCCCCCATAAGCTTGAAAAGGGCAGTTTTCTaGGTGGAGGGAACCATGTGT +
Preference number: 4 (lower is better)
Translates to: ILRNADENVYSVFSPISLKRAVF*VEGTMC
Trigger: ACACATGGTTCCCTCCACCCAGAAAACTGCCCTTTT...CAAGCTTATGGGGGAGAAGACACTGTATACATTTTCATCTGCATTCCTTAGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
CDS-3UTR TCA 90 bp ATTCTAAGGAATGCAGATGAAAATGTATACAGTGTCTTCTCCCCCATAAGCTTGATTCCCATGACAGGATaGTCAGTCTTCAATGGCACA +
Preference number: 4 (lower is better)
Translates to: ILRNADENVYSVFSPISLIPMTG*SVFNGT
Trigger: TGTGCCATTGAAGACTGATCATCCTGTCATGGGAAT...CAAGCTTATGGGGGAGAAGACACTGTATACATTTTCATCTGCATTCCTTAGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
CDS-3UTR TCA 90 bp AAAAAGATCATAGACAAGGGGCCAGACCACATCAAATCTTTATTCTACCCATTCCACTCTGTATTCCCATaGCAGGATGATCAGTCTTCA +
Preference number: 4 (lower is better)
Translates to: KKIIDKGPDHIKSLFYPFHSVFP*QDDQSS
Trigger: TGAAGACTGATCATCCTGTCATGGGAATACAGAGTG...GAATGGGTAGAATAAAGATTTGATGTGGTCTGGCCCCTTGTCTATGATCTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
CDS-3UTR TCA 90 bp CTAAGGAATGCAGATGAAAATGTATACAGTGTCTTCTCCCCCATAAGCTTGAAACACTCTGTATTCCCATaGCAGGATGATCAGTCTTCA +
Preference number: 4 (lower is better)
Translates to: LRNADENVYSVFSPISLKHSVFP*QDDQSS
Trigger: TGAAGACTGATCATCCTGTCATGGGAATACAGAGTG...TTTCAAGCTTATGGGGGAGAAGACACTGTATACATTTTCATCTGCATTCCTTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
CDS-3UTR TCA 90 bp AAAAAGATCATAGACAAGGGGCCAGACCACATCAAATCTTTATTCTACCCATTCCGATGCAAACGGGAATaGTATGCATCATTTCTAGGC +
Preference number: 4 (lower is better)
Translates to: KKIIDKGPDHIKSLFYPFRCKRE*YASFLG
Trigger: GCCTAGAAATGATGCATATCATTCCCGTTTGCATCG...GAATGGGTAGAATAAAGATTTGATGTGGTCTGGCCCCTTGTCTATGATCTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331161.9
ENST00000615958.4
CDS-3UTR TCA 90 bp AGCTGCATAATGAAGTTTGACTTTTTAGTTTCAGGTGTCTACTCCCAAGTGACTGGCAACTCCCACTCATaGCTTCAAAGCATAATATCC +
Preference number: 4 (lower is better)
Translates to: SCIMKFDFLVSGVYSQVTGNSHS*LQSIIS
Trigger: GGATATTATGCTTTGAAGTCATGAGTGGGAGTTGCC...AGTCACTTGGGAGTAGACACCTGAAACTAAAAAGTCAAACTTCATTATGCAGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331161.9
ENST00000615958.4
CDS-3UTR TCA 90 bp AGCTGCATAATGAAGTTTGACTTTTTAGTTTCAGGTGTCTACTCCCAAGTGACTCCTCTGAAGGCTCTGTaGAAGAAAGGCAACAATGTT +
Preference number: 4 (lower is better)
Translates to: SCIMKFDFLVSGVYSQVTPLKAL*KKGNNV
Trigger: AACATTGTTGCCTTTCTTTCACAGAGCCTTCAGAGG...AGTCACTTGGGAGTAGACACCTGAAACTAAAAAGTCAAACTTCATTATGCAGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331161.9
ENST00000615958.4
CDS-3UTR GCA 90 bp AACAGACTTATACCCCTACCCTTAGTCACATTGCACAGTGATGTAAATGAAAAATCTTCTTCCAGCCTCTaGTTGCGGATCTTCTTTGGT +
Preference number: 4 (lower is better)
Translates to: NRLIPLPLVTLHSDVNEKSSSSL*LRIFFG
Trigger: ACCAAAGAAGATCCGCAAGCAGAGGCTGGAAGAAGA...TTTTTCATTTACATCACTGTGCAATGTGACTAAGGGTAGGGGTATAAGTCTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331161.9
ENST00000615958.4
CDS-3UTR GCA 90 bp ATACATCTTTTGCATTTGTGGAGCTCAGAAACAATGTGTTGGAGACAGTTTAGATCTTCTTCCAGCCTCTaGTTGCGGATCTTCTTTGGT +
Preference number: 4 (lower is better)
Translates to: IHLLHLWSSETMCWRQFRSSSSL*LRIFFG
Trigger: ACCAAAGAAGATCCGCAAGCAGAGGCTGGAAGAAGA...TCTAAACTGTCTCCAACACATTGTTTCTGAGCTCCACAAATGCAAAAGATGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
CDS-3UTR GCA 90 bp TCCCAAGTGACTGCAGTCTCCATGTCTCTTAATTCATGCTCTCAAGAGAGAGAGTGTGCTTTTCAATTATaGCAATGTCGTGTTCTAGTT +
Preference number: 4 (lower is better)
Translates to: SQVTAVSMSLNSCSQERECAFQL*QCRVLV
Trigger: AACTAGAACACGACATTGGCATAATTGAAAAGCACA...CTCTCTCTCTTGAGAGCATGAATTAAGAGACATGGAGACTGCAGTCACTTGGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
CDS-3UTR GCA 90 bp ACAATACAATATGACCAGTGCTATAAAGGAAGGCCAGATTCTGAGGAATCAAAGCAAACGGGAATGATATaGATCATTTCTAGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: TIQYDQCYKGRPDSEESKQTGMI*IISRPG
Trigger: GCCAGGCCTAGAAATGATGCATATCATTCCCGTTTG...CTTTGATTCCTCAGAATCTGGCCTTCCTTTATAGCACTGGTCATATTGTATTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331161.9
ENST00000615958.4
CDS-3UTR GCA 90 bp TTCATGCTCTCAAGAGAGAGAGAATCTGATCAGTCACTGGTCAGCTGTCCAAGTGCAAATAACCAGATATaGACAATACAATATGACCAG +
Preference number: 4 (lower is better)
Translates to: FMLSRERESDQSLVSCPSANNQI*TIQYDQ
Trigger: CTGGTCATATTGTATTGTGCATATCTGGTTATTTGC...ACTTGGACAGCTGACCAGTGACTGATCAGATTCTCTCTCTCTTGAGAGCATGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
CDS-3UTR GCA 90 bp CAATACAATATGACCAGTGCTATAAAGGAAGGCCAGATTCTGAGGAATCAAAGGCCTTCTGTTCCATTTTaGTTCATGGGCTCTATAAGC +
Preference number: 4 (lower is better)
Translates to: QYNMTSAIKEGQILRNQRPSVPF*FMGSIS
Trigger: GCTTATAGAGCCCATGAAGCAAAATGGAACAGAAGG...CCTTTGATTCCTCAGAATCTGGCCTTCCTTTATAGCACTGGTCATATTGTATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615958.4
CDS-3UTR CCA 90 bp AAAAAGATCATAGACAAGGGGCCAGACCACATCAAATCTTTATTCTACCCATTCATGATCAGTCTTCAATaGCACAGCAGGCTTTTTGGG +
Preference number: 4 (lower is better)
Translates to: KKIIDKGPDHIKSLFYPFMISLQ*HSRLFG
Trigger: CCCAAAAAGCCTGCTGTGCCATTGAAGACTGATCAT...GAATGGGTAGAATAAAGATTTGATGTGGTCTGGCCCCTTGTCTATGATCTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
CDS-3UTR CCA 90 bp ATTCTAAGGAATGCAGATGAAAATGTATACAGTGTCTTCTCCCCCATAAGCTTGAAGACCGAGAGGGACTaGAATTCTTTATGCACCTCT +
Preference number: 4 (lower is better)
Translates to: ILRNADENVYSVFSPISLKTERD*NSLCTS
Trigger: AGAGGTGCATAAAGAATTCCAGTCCCTCTCGGTCTT...CAAGCTTATGGGGGAGAAGACACTGTATACATTTTCATCTGCATTCCTTAGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
CDS-3UTR CCA 90 bp ATACATCTTTTGCATTTGTGGAGCTCAGAAACAATGTGTTGGAGACAGTTTAGACAGAGAAAGACTGCCTaGATCAACAGAGTCACCAGA +
Preference number: 4 (lower is better)
Translates to: IHLLHLWSSETMCWRQFRQRKTA*INRVTR
Trigger: TCTGGTGACTCTGTTGATCCAGGCAGTCTTTCTCTG...TCTAAACTGTCTCCAACACATTGTTTCTGAGCTCCACAAATGCAAAAGATGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331161.9
ENST00000615958.4
CDS-3UTR CCA 90 bp AACAGACTTATACCCCTACCCTTAGTCACATTGCACAGTGATGTAAATGAAAAAGAATGCCAGTTACAGTaGGTAGGGAAGAAGCAGCAT +
Preference number: 4 (lower is better)
Translates to: NRLIPLPLVTLHSDVNEKECQLQ*VGKKQH
Trigger: ATGCTGCTTCTTCCCTACCCACTGTAACTGGCATTC...TTTTTCATTTACATCACTGTGCAATGTGACTAAGGGTAGGGGTATAAGTCTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331161.9
ENST00000615958.4
CDS-3UTR TCA 90 bp AACAGACTTATACCCCTACCCTTAGTCACATTGCACAGTGATGTAAATGAAAAACGATGCAAACGGGAATaGTATGCATCATTTCTAGGC +
Preference number: 4 (lower is better)
Translates to: NRLIPLPLVTLHSDVNEKRCKRE*YASFLG
Trigger: GCCTAGAAATGATGCATATCATTCCCGTTTGCATCG...TTTTTCATTTACATCACTGTGCAATGTGACTAAGGGTAGGGGTATAAGTCTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331161.9
ENST00000615958.4
CDS-3UTR TCA 90 bp CAATACAATATGACCAGTGCTATAAAGGAAGGCCAGATTCTGAGGAATCAAAGGATTGTCATGGAAATGTaGTGTGAGCTGATGAAGACT +
Preference number: 4 (lower is better)
Translates to: QYNMTSAIKEGQILRNQRIVMEM*CELMKT
Trigger: AGTCTTCATCAGCTCACATCACATTTCCATGACAAT...CCTTTGATTCCTCAGAATCTGGCCTTCCTTTATAGCACTGGTCATATTGTATTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
CDS-3UTR TCA 90 bp AACAGACTTATACCCCTACCCTTAGTCACATTGCACAGTGATGTAAATGAAAAACCTAATCCTGCGTATTaGGTCATTCTCTTCTTGAGC +
Preference number: 4 (lower is better)
Translates to: NRLIPLPLVTLHSDVNEKPNPAY*VILFLS
Trigger: GCTCAAGAAGAGAATGACTCAATACGCAGGATTAGG...TTTTTCATTTACATCACTGTGCAATGTGACTAAGGGTAGGGGTATAAGTCTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615958.4
CDS-3UTR TCA 90 bp AGCTGCATAATGAAGTTTGACTTTTTAGTTTCAGGTGTCTACTCCCAAGTGACTTTTTGGGTGATAGGATaGCCTAGGTATGTATGTGTA +
Preference number: 4 (lower is better)
Translates to: SCIMKFDFLVSGVYSQVTFWVIG*PRYVCV
Trigger: TACACATACATACCTAGGTCATCCTATCACCCAAAA...AGTCACTTGGGAGTAGACACCTGAAACTAAAAAGTCAAACTTCATTATGCAGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
CDS-3UTR TCA 90 bp CTAAGGAATGCAGATGAAAATGTATACAGTGTCTTCTCCCCCATAAGCTTGAAAATTGTCATGGAAATGTaGTGTGAGCTGATGAAGACT +
Preference number: 4 (lower is better)
Translates to: LRNADENVYSVFSPISLKIVMEM*CELMKT
Trigger: AGTCTTCATCAGCTCACATCACATTTCCATGACAAT...TTTCAAGCTTATGGGGGAGAAGACACTGTATACATTTTCATCTGCATTCCTTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
CDS-3UTR GCA 90 bp AGCTGCATAATGAAGTTTGACTTTTTAGTTTCAGGTGTCTACTCCCAAGTGACTGAAGGCTCAAGATCATaGTTGTCTCCAGTTCTTTTA +
Preference number: 4 (lower is better)
Translates to: SCIMKFDFLVSGVYSQVTEGSRS*LSPVLL
Trigger: TAAAAGAACTGGAGACAAGCATGATCTTGAGCCTTC...AGTCACTTGGGAGTAGACACCTGAAACTAAAAAGTCAAACTTCATTATGCAGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
CDS-3UTR GCA 90 bp ACAATACAATATGACCAGTGCTATAAAGGAAGGCCAGATTCTGAGGAATCAAAGGAAGGCTCAAGATCATaGTTGTCTCCAGTTCTTTTA +
Preference number: 4 (lower is better)
Translates to: TIQYDQCYKGRPDSEESKEGSRS*LSPVLL
Trigger: TAAAAGAACTGGAGACAAGCATGATCTTGAGCCTTC...CTTTGATTCCTCAGAATCTGGCCTTCCTTTATAGCACTGGTCATATTGTATTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
CDS-3UTR GCA 90 bp CTAAGGAATGCAGATGAAAATGTATACAGTGTCTTCTCCCCCATAAGCTTGAAAGAGCCTTTTCATAGCTaGTTTCTTAAGGTTTTCCTG +
Preference number: 4 (lower is better)
Translates to: LRNADENVYSVFSPISLKEPFHS*FLKVFL
Trigger: CAGGAAAACCTTAAGAAAGCAGCTATGAAAAGGCTC...TTTCAAGCTTATGGGGGAGAAGACACTGTATACATTTTCATCTGCATTCCTTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
CDS-3UTR GCA 90 bp AAAAAGATCATAGACAAGGGGCCAGACCACATCAAATCTTTATTCTACCCATTCGAGCCTTTTCATAGCTaGTTTCTTAAGGTTTTCCTG +
Preference number: 4 (lower is better)
Translates to: KKIIDKGPDHIKSLFYPFEPFHS*FLKVFL
Trigger: CAGGAAAACCTTAAGAAAGCAGCTATGAAAAGGCTC...GAATGGGTAGAATAAAGATTTGATGTGGTCTGGCCCCTTGTCTATGATCTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
CDS-3UTR GCA 90 bp TTTTTAGTTTCAGGTGTCTACTCCCAAGTGACTGCAGTCTCCATGTCTCTTAATCAGTTTTCAAAGTTGTaGTGTTGGTATCATGCGTTA +
Preference number: 4 (lower is better)
Translates to: FLVSGVYSQVTAVSMSLNQFSKL*CWYHAL
Trigger: TAACGCATGATACCAACAGCACAACTTTGAAAACTG...ATTAAGAGACATGGAGACTGCAGTCACTTGGGAGTAGACACCTGAAACTAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
CDS-3UTR GCA 90 bp AATCAAGCTAAAAAGATCATAGACAAGGGGCCAGACCACATCAAATCTTTATTCAAATCGACCCTGGTTTaGAGCTATATGGTTGATGCT +
Preference number: 4 (lower is better)
Translates to: NQAKKIIDKGPDHIKSLFKSTLV*SYMVDA
Trigger: AGCATCAACCATATAGCTGCAAACCAGGGTCGATTT...GAATAAAGATTTGATGTGGTCTGGCCCCTTGTCTATGATCTTTTTAGCTTGATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615958.4
CDS-3UTR CCA 90 bp ATTCTAAGGAATGCAGATGAAAATGTATACAGTGTCTTCTCCCCCATAAGCTTGTCAAAGTTGTGCTGTTaGTATCATGCGTTATTGGCA +
Preference number: 4 (lower is better)
Translates to: ILRNADENVYSVFSPISLSKLCC*YHALLA
Trigger: TGCCAATAACGCATGATACCAACAGCACAACTTTGA...CAAGCTTATGGGGGAGAAGACACTGTATACATTTTCATCTGCATTCCTTAGAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
CDS-3UTR CCA 90 bp AGCTGCATAATGAAGTTTGACTTTTTAGTTTCAGGTGTCTACTCCCAAGTGACTTCAAAGTTGTGCTGTTaGTATCATGCGTTATTGGCA +
Preference number: 4 (lower is better)
Translates to: SCIMKFDFLVSGVYSQVTSKLCC*YHALLA
Trigger: TGCCAATAACGCATGATACCAACAGCACAACTTTGA...AGTCACTTGGGAGTAGACACCTGAAACTAAAAAGTCAAACTTCATTATGCAGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
CDS-3UTR GCA 90 bp AATCAAGCTAAAAAGATCATAGACAAGGGGCCAGACCACATCAAATCTTTATTCGAAGGCTCAAGATCATaGTTGTCTCCAGTTCTTTTA +
Preference number: 4 (lower is better)
Translates to: NQAKKIIDKGPDHIKSLFEGSRS*LSPVLL
Trigger: TAAAAGAACTGGAGACAAGCATGATCTTGAGCCTTC...GAATAAAGATTTGATGTGGTCTGGCCCCTTGTCTATGATCTTTTTAGCTTGATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
CDS-3UTR GCA 90 bp TTTTTAGTTTCAGGTGTCTACTCCCAAGTGACTGCAGTCTCCATGTCTCTTAATTGTGCTTTTCAATTATaGCAATGTCGTGTTCTAGTT +
Preference number: 4 (lower is better)
Translates to: FLVSGVYSQVTAVSMSLNCAFQL*QCRVLV
Trigger: AACTAGAACACGACATTGGCATAATTGAAAAGCACA...ATTAAGAGACATGGAGACTGCAGTCACTTGGGAGTAGACACCTGAAACTAAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
CDS-3UTR GCA 90 bp ATTCTAAGGAATGCAGATGAAAATGTATACAGTGTCTTCTCCCCCATAAGCTTGCAGTTTTCAAAGTTGTaGTGTTGGTATCATGCGTTA +
Preference number: 4 (lower is better)
Translates to: ILRNADENVYSVFSPISLQFSKL*CWYHAL
Trigger: TAACGCATGATACCAACAGCACAACTTTGAAAACTG...CAAGCTTATGGGGGAGAAGACACTGTATACATTTTCATCTGCATTCCTTAGAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
CDS-3UTR GCA 90 bp CAATACAATATGACCAGTGCTATAAAGGAAGGCCAGATTCTGAGGAATCAAAGGGGAAAATACATCTTTTaGATTTGTGGAGCTCAGAAA +
Preference number: 4 (lower is better)
Translates to: QYNMTSAIKEGQILRNQRGKYIF*ICGAQK
Trigger: TTTCTGAGCTCCACAAATGCAAAAGATGTATTTTCC...CCTTTGATTCCTCAGAATCTGGCCTTCCTTTATAGCACTGGTCATATTGTATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
CDS-3UTR GCA 90 bp CAATACAATATGACCAGTGCTATAAAGGAAGGCCAGATTCTGAGGAATCAAAGGGCAAATAACCAGATATaGACAATACAATATGACCAG +
Preference number: 4 (lower is better)
Translates to: QYNMTSAIKEGQILRNQRANNQI*TIQYDQ
Trigger: CTGGTCATATTGTATTGTGCATATCTGGTTATTTGC...CCTTTGATTCCTCAGAATCTGGCCTTCCTTTATAGCACTGGTCATATTGTATTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
CDS-3UTR CCA 90 bp CTAAGGAATGCAGATGAAAATGTATACAGTGTCTTCTCCCCCATAAGCTTGAAATCAGAAACAATGTGTTaGAGACAGTTTAGAGTAGCA +
Preference number: 4 (lower is better)
Translates to: LRNADENVYSVFSPISLKSETMC*RQFRVA
Trigger: TGCTACTCTAAACTGTCTCCAACACATTGTTTCTGA...TTTCAAGCTTATGGGGGAGAAGACACTGTATACATTTTCATCTGCATTCCTTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
CDS-3UTR CCA 90 bp ATTCTAAGGAATGCAGATGAAAATGTATACAGTGTCTTCTCCCCCATAAGCTTGTCAGAAACAATGTGTTaGAGACAGTTTAGAGTAGCA +
Preference number: 4 (lower is better)
Translates to: ILRNADENVYSVFSPISLSETMC*RQFRVA
Trigger: TGCTACTCTAAACTGTCTCCAACACATTGTTTCTGA...CAAGCTTATGGGGGAGAAGACACTGTATACATTTTCATCTGCATTCCTTAGAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
CDS-3UTR CCA 90 bp AAAAAGATCATAGACAAGGGGCCAGACCACATCAAATCTTTATTCTACCCATTCCATCTTTTGCATTTGTaGAGCTCAGAAACAATGTGT +
Preference number: 4 (lower is better)
Translates to: KKIIDKGPDHIKSLFYPFHLLHL*SSETMC
Trigger: ACACATTGTTTCTGAGCTCCACAAATGCAAAAGATG...GAATGGGTAGAATAAAGATTTGATGTGGTCTGGCCCCTTGTCTATGATCTTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
3UTR CAA 72 bp GCATGGAACAGACTTATACCCCTACCCTTAGTCACATaGCACAGTGATGTAAATGAAAAATGTATCTTTATC +
Preference number: 4 (lower is better)
Translates to: AWNRLIPLPLVT*HSDVNEKCIFI
Trigger: GATAAAGATACATTTTTCATTTACATCACTGTGCAATGTGACTAAGGGTAGGGGTATAAGTCTGTTCCATGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331161.9
ENST00000615958.4
CDS-3UTR TCA 90 bp AACAGACTTATACCCCTACCCTTAGTCACATTGCACAGTGATGTAAATGAAAAACAGTGTTACGAATACTaGAAATATTTCTCACTGGGA +
Preference number: 4 (lower is better)
Translates to: NRLIPLPLVTLHSDVNEKQCYEY*KYFSLG
Trigger: TCCCAGTGAGAAATATTTTCAGTATTCGTAACACTG...TTTTTCATTTACATCACTGTGCAATGTGACTAAGGGTAGGGGTATAAGTCTGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000331161.9
ENST00000615958.4
CDS-3UTR GCA 90 bp CTAAGGAATGCAGATGAAAATGTATACAGTGTCTTCTCCCCCATAAGCTTGAAAGGAAAATACATCTTTTaGATTTGTGGAGCTCAGAAA +
Preference number: 4 (lower is better)
Translates to: LRNADENVYSVFSPISLKGKYIF*ICGAQK
Trigger: TTTCTGAGCTCCACAAATGCAAAAGATGTATTTTCC...TTTCAAGCTTATGGGGGAGAAGACACTGTATACATTTTCATCTGCATTCCTTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
CDS-3UTR GCA 90 bp AAAAAGATCATAGACAAGGGGCCAGACCACATCAAATCTTTATTCTACCCATTCCCAAGTCAAACTAGCTaGATAATGAAGTTTGACTTT +
Preference number: 4 (lower is better)
Translates to: KKIIDKGPDHIKSLFYPFPSQTS*IMKFDF
Trigger: AAAGTCAAACTTCATTATGCAGCTAGTTTGACTTGG...GAATGGGTAGAATAAAGATTTGATGTGGTCTGGCCCCTTGTCTATGATCTTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
CDS-3UTR GCA 90 bp ATTCTAAGGAATGCAGATGAAAATGTATACAGTGTCTTCTCCCCCATAAGCTTGCCAAGTCAAACTAGCTaGATAATGAAGTTTGACTTT +
Preference number: 4 (lower is better)
Translates to: ILRNADENVYSVFSPISLPSQTS*IMKFDF
Trigger: AAAGTCAAACTTCATTATGCAGCTAGTTTGACTTGG...CAAGCTTATGGGGGAGAAGACACTGTATACATTTTCATCTGCATTCCTTAGAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
CDS-3UTR GCA 90 bp ATACATCTTTTGCATTTGTGGAGCTCAGAAACAATGTGTTGGAGACAGTTTAGATGTGCTTTTCAATTATaGCAATGTCGTGTTCTAGTT +
Preference number: 4 (lower is better)
Translates to: IHLLHLWSSETMCWRQFRCAFQL*QCRVLV
Trigger: AACTAGAACACGACATTGGCATAATTGAAAAGCACA...TCTAAACTGTCTCCAACACATTGTTTCTGAGCTCCACAAATGCAAAAGATGTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
CDS-3UTR CCA 90 bp AATCAAGCTAAAAAGATCATAGACAAGGGGCCAGACCACATCAAATCTTTATTCAGACACATCCAGATATaGAAAATCAACTTTATCCCA +
Preference number: 4 (lower is better)
Translates to: NQAKKIIDKGPDHIKSLFRHIQI*KINFIP
Trigger: TGGGATAAAGTTGATTTTCCATATCTGGATGTGTCT...GAATAAAGATTTGATGTGGTCTGGCCCCTTGTCTATGATCTTTTTAGCTTGATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000615958.4
CDS-3UTR CAA 90 bp TACGTGCCTCTCCCTAACTCTGGATCAGATGCATCCTACCCACTCTGTAAGTCTGCCAGGCCCTGGGCTTaGAAATCGACCCTGGTTTGC +
Preference number: 5 (lower is better)
Translates to: YVPLPNSGSDASYPLCKSARPWA*KSTLVC
Trigger: GCAAACCAGGGTCGATTTCAAAGCCCAGGGCCTGGC...AGACTTACAGAGTGGGTAGGATGCATCTGATCCAGAGTTAGGGAGAGGCACGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615958.4
CDS GCA 90 bp AATCAACTTTATCCCAGGCTTTCTTGTGCCGCTCCTCCAGCCGCCTaGTCTGTTGGGTGCAGCTCCTTCTGTTCCATTTTGCTTCATGGG +
Preference number: 5 (lower is better)
Translates to: NQLYPRLSCAAPPAA*SVGCSSFCSILLHG
Trigger: CCCATGAAGCAAAATGGAACAGAAGGAGCTGCACCCAACAGAGCAGGCGGCTGGAGGAGCGGCACAAGAAAGCCTGGGATAAAGTTGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615958.4
CDS GCA 90 bp GACACATCCAGATATGGAAAATCAACTTTATCCCAGGCTTTCTTGTaGCGCTCCTCCAGCCGCCTGCTCTGTTGGGTGCAGCTCCTTCTG +
Preference number: 5 (lower is better)
Translates to: DTSRYGKSTLSQAFL*RSSSRLLCWVQLLL
Trigger: CAGAAGGAGCTGCACCCAACAGAGCAGGCGGCTGGAGGAGCGGCACAAGAAAGCCTGGGATAAAGTTGATTTTCCATATCTGGATGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615958.4
CDS TCA 90 bp AAGAAGTTCATAGGTGTTGGACACGTGTGGCCAGGCCCTGGGCTTTaGAATCGACCCTGGTTTGCAGCTATATGGTTGATGCTGCCAGAC +
Preference number: 5 (lower is better)
Translates to: KKFIGVGHVWPGPGL*NRPWFAAIWLMLPD
Trigger: GTCTGGCAGCATCAACCATATAGCTGCAAACCAGGGTCGATTTCAAAGCCCAGGGCCTGGCCACACGTGTCCAACACCTATGAACTTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615958.4
CDS GCA 90 bp TGGACACGTGTGGCCAGGCCCTGGGCTTTGAAATCGACCCTGGTTTaGAGCTATATGGTTGATGCTGCCAGACACATCCAGATATGGAAA +
Preference number: 5 (lower is better)
Translates to: WTRVARPWALKSTLV*SYMVDAARHIQIWK
Trigger: TTTCCATATCTGGATGTGTCTGGCAGCATCAACCATATAGCTGCAAACCAGGGTCGATTTCAAAGCCCAGGGCCTGGCCACACGTGTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615958.4
CDS-3UTR CAA 90 bp GGATCAGATGCATCCTACCCACTCTGTAAGTCTGGGTCCCTGAGTGACTGCAGAACTCAGAAGAGCACGTaGGATCCATGGCCACCAAAT +
Preference number: 5 (lower is better)
Translates to: GSDASYPLCKSGSLSDCRTQKST*DPWPPN
Trigger: ATTTGGTGGCCATGGATCCAACGTGCTCTTCTGAGT...TCTGCAGTCACTCAGGGACCCAGACTTACAGAGTGGGTAGGATGCATCTGATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000331161.9
CDS-3UTR CAA 90 bp GGGAGGTTGAACTGGCTCTATCCAAGTTTGGGATCCCGTGGTAGGGATCACCTTTCTTCCAGCCTCTGCTaGCGGATCTTCTTTGGTATA +
Preference number: 5 (lower is better)
Translates to: GRLNWLYPSLGSRGRDHLSSSLC*RIFFGI
Trigger: TATACCAAAGAAGATCCGCAAGCAGAGGCTGGAAGA...AAGGTGATCCCTACCACGGGATCCCAAACTTGGATAGAGCCAGTTCAACCTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
CDS-3UTR CAA 90 bp ACTGGCTCTATCCAAGTTTGGGATCCCGTGGTAGGGATCACCTTTCCAGGAACATCTTCCAGCCTCTGCTaGCGGATCTTCTTTGGTATA +
Preference number: 5 (lower is better)
Translates to: TGSIQVWDPVVGITFPGTSSSLC*RIFFGI
Trigger: TATACCAAAGAAGATCCGCAAGCAGAGGCTGGAAGA...TGTTCCTGGAAAGGTGATCCCTACCACGGGATCCCAAACTTGGATAGAGCCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
CDS-3UTR CAA 90 bp GAAGGCCAGATTCTGAGGAATCAAAGGGGATTGTCATGGAAATGTGATGTGAGCTGGCTCTATCCAAGTTaGGGATCCCGTGGTAGGGAT +
Preference number: 5 (lower is better)
Translates to: EGQILRNQRGLSWKCDVSWLYPS*GSRGRD
Trigger: ATCCCTACCACGGGATCCCAAACTTGGATAGAGCCA...GCTCACATCACATTTCCATGACAATCCCCTTTGATTCCTCAGAATCTGGCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
CDS-3UTR CAA 90 bp TCATGCTCTCAAGAGAGAGAGAATCTGATCAGTCACTGGTCAGCTGTCCAAGTCATGGATTGGGGGAGGTaGAACTGGCTCTATCCAAGT +
Preference number: 5 (lower is better)
Translates to: SCSQERENLISHWSAVQVMDWGR*NWLYPS
Trigger: ACTTGGATAGAGCCAGTTCAACCTCCCCCAATCCAT...GACTTGGACAGCTGACCAGTGACTGATCAGATTCTCTCTCTCTTGAGAGCATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
CDS-3UTR CAA 90 bp TTTTTAGTTTCAGGTGTCTACTCCCAAGTGACTGCAGTCTCCATGTCTCTTAATCAGCCGCCTGCTCTGTaGGGTGCAGCTCCTTCTGTT +
Preference number: 5 (lower is better)
Translates to: FLVSGVYSQVTAVSMSLNQPPAL*GAAPSV
Trigger: AACAGAAGGAGCTGCACCCAACAGAGCAGGCGGCTG...ATTAAGAGACATGGAGACTGCAGTCACTTGGGAGTAGACACCTGAAACTAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615958.4
CDS-3UTR CAA 90 bp CAATACAATATGACCAGTGCTATAAAGGAAGGCCAGATTCTGAGGAATCAAAGGTTATCCCAGGCTTTCTaGTGCCGCTCCTCCAGCCGC +
Preference number: 5 (lower is better)
Translates to: QYNMTSAIKEGQILRNQRLSQAF*CRSSSR
Trigger: GCGGCTGGAGGAGCGGCACAAGAAAGCCTGGGATAA...CCTTTGATTCCTCAGAATCTGGCCTTCCTTTATAGCACTGGTCATATTGTATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615958.4
CDS TCA 90 bp CAGGCCCTGGGCTTTGAAATCGACCCTGGTTTGCAGCTATATGGTTaGTGCTGCCAGACACATCCAGATATGGAAAATCAACTTTATCCC +
Preference number: 5 (lower is better)
Translates to: QALGFEIDPGLQLYG*CCQTHPDMENQLYP
Trigger: GGGATAAAGTTGATTTTCCATATCTGGATGTGTCTGGCAGCATCAACCATATAGCTGCAAACCAGGGTCGATTTCAAAGCCCAGGGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615958.4
CDS CCA 90 bp CTGGTTTGCAGCTATATGGTTGATGCTGCCAGACACATCCAGATATaGAAAATCAACTTTATCCCAGGCTTTCTTGTGCCGCTCCTCCAG +
Preference number: 5 (lower is better)
Translates to: LVCSYMVDAARHIQI*KINFIPGFLVPLLQ
Trigger: CTGGAGGAGCGGCACAAGAAAGCCTGGGATAAAGTTGATTTTCCATATCTGGATGTGTCTGGCAGCATCAACCATATAGCTGCAAACCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615958.4
CDS-3UTR CAA 90 bp TCCCAAGTGACTGCAGTCTCCATGTCTCTTAATTCATGCTCTCAAGAGAGAGAGACTCAGAAGAGCACGTaGGATCCATGGCCACCAAAT +
Preference number: 5 (lower is better)
Translates to: SQVTAVSMSLNSCSQERETQKST*DPWPPN
Trigger: ATTTGGTGGCCATGGATCCAACGTGCTCTTCTGAGT...CTCTCTCTCTTGAGAGCATGAATTAAGAGACATGGAGACTGCAGTCACTTGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331161.9
ENST00000496261.6
CDS-3UTR CAA 90 bp ACTGGCTCTATCCAAGTTTGGGATCCCGTGGTAGGGATCACCTTTCCAGGAACATTCAAAGTTGTGCTGTaGGTATCATGCGTTATTGGC +
Preference number: 5 (lower is better)
Translates to: TGSIQVWDPVVGITFPGTFKVVL*VSCVIG
Trigger: GCCAATAACGCATGATACCAACAGCACAACTTTGAA...TGTTCCTGGAAAGGTGATCCCTACCACGGGATCCCAAACTTGGATAGAGCCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
CDS-3UTR CAA 90 bp TCCCAAGTGACTGCAGTCTCCATGTCTCTTAATTCATGCTCTCAAGAGAGAGAGATGGATTGGGGGAGGTaGAACTGGCTCTATCCAAGT +
Preference number: 5 (lower is better)
Translates to: SQVTAVSMSLNSCSQEREMDWGR*NWLYPS
Trigger: ACTTGGATAGAGCCAGTTCAACCTCCCCCAATCCAT...CTCTCTCTCTTGAGAGCATGAATTAAGAGACATGGAGACTGCAGTCACTTGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
CDS-3UTR CAA 90 bp TACGTGCCTCTCCCTAACTCTGGATCAGATGCATCCTACCCACTCTGTAAGTCTGGCTCAAGATCATGCTaGTCTCCAGTTCTTTTATCA +
Preference number: 5 (lower is better)
Translates to: YVPLPNSGSDASYPLCKSGSRSC*SPVLLS
Trigger: TGATAAAAGAACTGGAGACAAGCATGATCTTGAGCC...AGACTTACAGAGTGGGTAGGATGCATCTGATCCAGAGTTAGGGAGAGGCACGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331161.9
ENST00000615958.4
CDS-3UTR CAA 90 bp GATTGGGGGAGGTTGAACTGGCTCTATCCAAGTTTGGGATCCCGTGGTAGGGATAGGAAAATACATCTTTaGCATTTGTGGAGCTCAGAA +
Preference number: 5 (lower is better)
Translates to: DWGRLNWLYPSLGSRGRDRKIHL*HLWSSE
Trigger: TTCTGAGCTCCACAAATGCAAAAGATGTATTTTCCT...ATCCCTACCACGGGATCCCAAACTTGGATAGAGCCAGTTCAACCTCCCCCAATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
CDS-3UTR CAA 90 bp GAAGGCCAGATTCTGAGGAATCAAAGGGGATTGTCATGGAAATGTGATGTGAGCTTTGCAGCTATATGGTaGATGCTGCCAGACACATCC +
Preference number: 5 (lower is better)
Translates to: EGQILRNQRGLSWKCDVSFAAIW*MLPDTS
Trigger: GGATGTGTCTGGCAGCATCAACCATATAGCTGCAAA...GCTCACATCACATTTCCATGACAATCCCCTTTGATTCCTCAGAATCTGGCCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615958.4
CDS-3UTR CAA 90 bp CAAATAACCAGATATGCACAATACAATATGACCAGTGCTATAAAGGAAGGCCAGGGCACAGCAGGCTTTTaGGGCACGTTCCGATCAAAG +
Preference number: 5 (lower is better)
Translates to: QITRYAQYNMTSAIKEGQGTAGF*GTFRSK
Trigger: CTTTGATCGGAACGTGCCCAAAAAGCCTGCTGTGCC...CTGGCCTTCCTTTATAGCACTGGTCATATTGTATTGTGCATATCTGGTTATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
CDS-3UTR CAA 90 bp CTAAGGAATGCAGATGAAAATGTATACAGTGTCTTCTCCCCCATAAGCTTGAAAGGCACAGCAGGCTTTTaGGGCACGTTCCGATCAAAG +
Preference number: 5 (lower is better)
Translates to: LRNADENVYSVFSPISLKGTAGF*GTFRSK
Trigger: CTTTGATCGGAACGTGCCCAAAAAGCCTGCTGTGCC...TTTCAAGCTTATGGGGGAGAAGACACTGTATACATTTTCATCTGCATTCCTTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
CDS-3UTR CAA 90 bp TACGTGCCTCTCCCTAACTCTGGATCAGATGCATCCTACCCACTCTGTAAGTCTACGATCATAGTCTTCTaGGGCTTTCTTTATTTCCTC +
Preference number: 5 (lower is better)
Translates to: YVPLPNSGSDASYPLCKSTIIVF*GFLYFL
Trigger: GAGGAAATAAAGAAAGCCCAAGAAGACTATGATCGT...AGACTTACAGAGTGGGTAGGATGCATCTGATCCAGAGTTAGGGAGAGGCACGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331161.9
ENST00000615958.4
CDS-3UTR CAA 90 bp ACTGGCTCTATCCAAGTTTGGGATCCCGTGGTAGGGATCACCTTTCCAGGAACAAGGAAAATACATCTTTaGCATTTGTGGAGCTCAGAA +
Preference number: 5 (lower is better)
Translates to: TGSIQVWDPVVGITFPGTRKIHL*HLWSSE
Trigger: TTCTGAGCTCCACAAATGCAAAAGATGTATTTTCCT...TGTTCCTGGAAAGGTGATCCCTACCACGGGATCCCAAACTTGGATAGAGCCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
CDS-3UTR CAA 90 bp ATACATCTTTTGCATTTGTGGAGCTCAGAAACAATGTGTTGGAGACAGTTTAGAGGCACAGCAGGCTTTTaGGGCACGTTCCGATCAAAG +
Preference number: 5 (lower is better)
Translates to: IHLLHLWSSETMCWRQFRGTAGF*GTFRSK
Trigger: CTTTGATCGGAACGTGCCCAAAAAGCCTGCTGTGCC...TCTAAACTGTCTCCAACACATTGTTTCTGAGCTCCACAAATGCAAAAGATGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
CDS-3UTR CAA 90 bp TTCATGCTCTCAAGAGAGAGAGAATCTGATCAGTCACTGGTCAGCTGTCCAAGTGGCTCAAGATCATGCTaGTCTCCAGTTCTTTTATCA +
Preference number: 5 (lower is better)
Translates to: FMLSRERESDQSLVSCPSGSRSC*SPVLLS
Trigger: TGATAAAAGAACTGGAGACAAGCATGATCTTGAGCC...ACTTGGACAGCTGACCAGTGACTGATCAGATTCTCTCTCTCTTGAGAGCATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
CDS-3UTR CAA 90 bp TCCCAAGTGACTGCAGTCTCCATGTCTCTTAATTCATGCTCTCAAGAGAGAGAGTTCAAAGTTGTGCTGTaGGTATCATGCGTTATTGGC +
Preference number: 5 (lower is better)
Translates to: SQVTAVSMSLNSCSQEREFKVVL*VSCVIG
Trigger: GCCAATAACGCATGATACCAACAGCACAACTTTGAA...CTCTCTCTCTTGAGAGCATGAATTAAGAGACATGGAGACTGCAGTCACTTGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
CDS-3UTR CAA 90 bp AAAAAGATCATAGACAAGGGGCCAGACCACATCAAATCTTTATTCTACCCATTCTGGCTCTATCCAAGTTaGGGATCCCGTGGTAGGGAT +
Preference number: 5 (lower is better)
Translates to: KKIIDKGPDHIKSLFYPFWLYPS*GSRGRD
Trigger: ATCCCTACCACGGGATCCCAAACTTGGATAGAGCCA...GAATGGGTAGAATAAAGATTTGATGTGGTCTGGCCCCTTGTCTATGATCTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
CDS-3UTR CAA 90 bp CAATACAATATGACCAGTGCTATAAAGGAAGGCCAGATTCTGAGGAATCAAAGGCTATTTCTCTCCGGATaGCTAAGCGTCGTTGACTGT +
Preference number: 5 (lower is better)
Translates to: QYNMTSAIKEGQILRNQRLFLSG*LSVVDC
Trigger: ACAGTCAACGACGCTTAGCAATCCGGAGAGAAATAG...CCTTTGATTCCTCAGAATCTGGCCTTCCTTTATAGCACTGGTCATATTGTATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000331161.9
ENST00000496261.6
CDS-3UTR CAA 90 bp TCATGCTCTCAAGAGAGAGAGAATCTGATCAGTCACTGGTCAGCTGTCCAAGTCATACATCTTTTGCATTaGTGGAGCTCAGAAACAATG +
Preference number: 5 (lower is better)
Translates to: SCSQERENLISHWSAVQVIHLLH*WSSETM
Trigger: CATTGTTTCTGAGCTCCACAAATGCAAAAGATGTAT...GACTTGGACAGCTGACCAGTGACTGATCAGATTCTCTCTCTCTTGAGAGCATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
CDS-3UTR CAA 90 bp ACAATACAATATGACCAGTGCTATAAAGGAAGGCCAGATTCTGAGGAATCAAAGATGGATTGGGGGAGGTaGAACTGGCTCTATCCAAGT +
Preference number: 5 (lower is better)
Translates to: TIQYDQCYKGRPDSEESKMDWGR*NWLYPS
Trigger: ACTTGGATAGAGCCAGTTCAACCTCCCCCAATCCAT...CTTTGATTCCTCAGAATCTGGCCTTCCTTTATAGCACTGGTCATATTGTATTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
CDS GCA 90 bp ATGCCAATGTCGTGTTCTAGTTGTTTCATTTCTTCTTCCAGCCTCTaGTTGCGGATCTTCTTTGGTATAGAATCTATAAAGACCGAGAGG +
Preference number: 5 (lower is better)
Translates to: MPMSCSSCFISSSSL*LRIFFGIESIKTER
Trigger: CCTCTCGGTCTTTATAGATTCTATACCAAAGAAGATCCGCAAGCAGAGGCTGGAAGAAGAAATGAAACAACTAGAACACGACATTGGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331161.9
ENST00000376363.5
ENST00000496261.6
ENST00000615958.4
CDS-3UTR CAA 90 bp CAAATAACCAGATATGCACAATACAATATGACCAGTGCTATAAAGGAAGGCCAGTCTTCCAGCCTCTGCTaGCGGATCTTCTTTGGTATA +
Preference number: 5 (lower is better)
Translates to: QITRYAQYNMTSAIKEGQSSSLC*RIFFGI
Trigger: TATACCAAAGAAGATCCGCAAGCAGAGGCTGGAAGA...CTGGCCTTCCTTTATAGCACTGGTCATATTGTATTGTGCATATCTGGTTATTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
CDS-3UTR CAA 90 bp GAAGGCCAGATTCTGAGGAATCAAAGGGGATTGTCATGGAAATGTGATGTGAGCATACATCTTTTGCATTaGTGGAGCTCAGAAACAATG +
Preference number: 5 (lower is better)
Translates to: EGQILRNQRGLSWKCDVSIHLLH*WSSETM
Trigger: CATTGTTTCTGAGCTCCACAAATGCAAAAGATGTAT...GCTCACATCACATTTCCATGACAATCCCCTTTGATTCCTCAGAATCTGGCCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
CDS-3UTR CAA 90 bp TTTTTAGTTTCAGGTGTCTACTCCCAAGTGACTGCAGTCTCCATGTCTCTTAATGTCCAAGTCAGATGTTaGTCCCTCTTTTGGGTGATA +
Preference number: 5 (lower is better)
Translates to: FLVSGVYSQVTAVSMSLNVQVRC*SLFWVI
Trigger: TATCACCCAAAAGAGGGACAAACATCTGACTTGGAC...ATTAAGAGACATGGAGACTGCAGTCACTTGGGAGTAGACACCTGAAACTAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
CDS-3UTR CAA 90 bp CTAAGGAATGCAGATGAAAATGTATACAGTGTCTTCTCCCCCATAAGCTTGAAAATGAAGACTAGGGATTaGCCAGGCAGCTATGTAGGA +
Preference number: 5 (lower is better)
Translates to: LRNADENVYSVFSPISLKMKTRD*PGSYVG
Trigger: TCCTACATAGCTGCCTGGCAAATCCCTAGTCTTCAT...TTTCAAGCTTATGGGGGAGAAGACACTGTATACATTTTCATCTGCATTCCTTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
CDS-3UTR CAA 90 bp AAAAAGATCATAGACAAGGGGCCAGACCACATCAAATCTTTATTCTACCCATTCATGAAGACTAGGGATTaGCCAGGCAGCTATGTAGGA +
Preference number: 5 (lower is better)
Translates to: KKIIDKGPDHIKSLFYPFMKTRD*PGSYVG
Trigger: TCCTACATAGCTGCCTGGCAAATCCCTAGTCTTCAT...GAATGGGTAGAATAAAGATTTGATGTGGTCTGGCCCCTTGTCTATGATCTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
CDS-3UTR CAA 90 bp AACAGACTTATACCCCTACCCTTAGTCACATTGCACAGTGATGTAAATGAAAAACTATTTCTCTCCGGATaGCTAAGCGTCGTTGACTGT +
Preference number: 5 (lower is better)
Translates to: NRLIPLPLVTLHSDVNEKLFLSG*LSVVDC
Trigger: ACAGTCAACGACGCTTAGCAATCCGGAGAGAAATAG...TTTTTCATTTACATCACTGTGCAATGTGACTAAGGGTAGGGGTATAAGTCTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331161.9
CDS-3UTR CAA 90 bp AGCTGCATAATGAAGTTTGACTTTTTAGTTTCAGGTGTCTACTCCCAAGTGACTGTCCAAGTCAGATGTTaGTCCCTCTTTTGGGTGATA +
Preference number: 5 (lower is better)
Translates to: SCIMKFDFLVSGVYSQVTVQVRC*SLFWVI
Trigger: TATCACCCAAAAGAGGGACAAACATCTGACTTGGAC...AGTCACTTGGGAGTAGACACCTGAAACTAAAAAGTCAAACTTCATTATGCAGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
CDS-3UTR CAA 90 bp CTAAGGAATGCAGATGAAAATGTATACAGTGTCTTCTCCCCCATAAGCTTGAAATTTCCCTCTGAAGGCTaGGGAATAACTGCAAATGTC +
Preference number: 5 (lower is better)
Translates to: LRNADENVYSVFSPISLKFPSEG*GITANV
Trigger: GACATTTGCAGTTATTCCCAAGCCTTCAGAGGGAAA...TTTCAAGCTTATGGGGGAGAAGACACTGTATACATTTTCATCTGCATTCCTTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000496261.6
CDS-3UTR CAA 90 bp TTTTTAGTTTCAGGTGTCTACTCCCAAGTGACTGCAGTCTCCATGTCTCTTAATTCCTTCTGTTCCATTTaGCTTCATGGGCTCTATAAG +
Preference number: 5 (lower is better)
Translates to: FLVSGVYSQVTAVSMSLNSFCSI*LHGLYK
Trigger: CTTATAGAGCCCATGAAGCAAAATGGAACAGAAGGA...ATTAAGAGACATGGAGACTGCAGTCACTTGGGAGTAGACACCTGAAACTAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615958.4
CDS-3UTR CAA 90 bp TTTTTAGTTTCAGGTGTCTACTCCCAAGTGACTGCAGTCTCCATGTCTCTTAATACGATCATAGTCTTCTaGGGCTTTCTTTATTTCCTC +
Preference number: 5 (lower is better)
Translates to: FLVSGVYSQVTAVSMSLNTIIVF*GFLYFL
Trigger: GAGGAAATAAAGAAAGCCCAAGAAGACTATGATCGT...ATTAAGAGACATGGAGACTGCAGTCACTTGGGAGTAGACACCTGAAACTAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
CDS-3UTR CAA 90 bp AAAAAGATCATAGACAAGGGGCCAGACCACATCAAATCTTTATTCTACCCATTCTTCAAAGTTGTGCTGTaGGTATCATGCGTTATTGGC +
Preference number: 5 (lower is better)
Translates to: KKIIDKGPDHIKSLFYPFFKVVL*VSCVIG
Trigger: GCCAATAACGCATGATACCAACAGCACAACTTTGAA...GAATGGGTAGAATAAAGATTTGATGTGGTCTGGCCCCTTGTCTATGATCTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
CDS-3UTR CAA 90 bp TTTGACTTTTTAGTTTCAGGTGTCTACTCCCAAGTGACTGCAGTCTCCATGTCTATACATCTTTTGCATTaGTGGAGCTCAGAAACAATG +
Preference number: 5 (lower is better)
Translates to: FDFLVSGVYSQVTAVSMSIHLLH*WSSETM
Trigger: CATTGTTTCTGAGCTCCACAAATGCAAAAGATGTAT...AGACATGGAGACTGCAGTCACTTGGGAGTAGACACCTGAAACTAAAAAGTCAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
CDS-3UTR CAA 90 bp TTTTTAGTTTCAGGTGTCTACTCCCAAGTGACTGCAGTCTCCATGTCTCTTAATAGCAACCAACCATTCTaGGTAAGTGAGAATTTGTCA +
Preference number: 5 (lower is better)
Translates to: FLVSGVYSQVTAVSMSLNSNQPF*VSENLS
Trigger: TGACAAATTCTCACTTACCAAGAATGGTTGGTTGCT...ATTAAGAGACATGGAGACTGCAGTCACTTGGGAGTAGACACCTGAAACTAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331161.9
ENST00000615958.4
CDS-3UTR CAA 90 bp CAATACAATATGACCAGTGCTATAAAGGAAGGCCAGATTCTGAGGAATCAAAGGTTCTCCCCCATAAGCTaGAAATGTTCATGGAAAACA +
Preference number: 5 (lower is better)
Translates to: QYNMTSAIKEGQILRNQRFSPIS*KCSWKT
Trigger: TGTTTTCCATGAACATTTCAAGCTTATGGGGGAGAA...CCTTTGATTCCTCAGAATCTGGCCTTCCTTTATAGCACTGGTCATATTGTATTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
CDS-3UTR CAA 90 bp AATCAAGCTAAAAAGATCATAGACAAGGGGCCAGACCACATCAAATCTTTATTCGGCTCAAGATCATGCTaGTCTCCAGTTCTTTTATCA +
Preference number: 5 (lower is better)
Translates to: NQAKKIIDKGPDHIKSLFGSRSC*SPVLLS
Trigger: TGATAAAAGAACTGGAGACAAGCATGATCTTGAGCC...GAATAAAGATTTGATGTGGTCTGGCCCCTTGTCTATGATCTTTTTAGCTTGATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
CDS-3UTR CAA 90 bp AGCTGCATAATGAAGTTTGACTTTTTAGTTTCAGGTGTCTACTCCCAAGTGACTACGATCATAGTCTTCTaGGGCTTTCTTTATTTCCTC +
Preference number: 5 (lower is better)
Translates to: SCIMKFDFLVSGVYSQVTTIIVF*GFLYFL
Trigger: GAGGAAATAAAGAAAGCCCAAGAAGACTATGATCGT...AGTCACTTGGGAGTAGACACCTGAAACTAAAAAGTCAAACTTCATTATGCAGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
CDS-3UTR CAA 90 bp AGCTGCATAATGAAGTTTGACTTTTTAGTTTCAGGTGTCTACTCCCAAGTGACTAGCAACCAACCATTCTaGGTAAGTGAGAATTTGTCA +
Preference number: 5 (lower is better)
Translates to: SCIMKFDFLVSGVYSQVTSNQPF*VSENLS
Trigger: TGACAAATTCTCACTTACCAAGAATGGTTGGTTGCT...AGTCACTTGGGAGTAGACACCTGAAACTAAAAAGTCAAACTTCATTATGCAGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000331161.9
ENST00000615958.4
CDS-3UTR CAA 90 bp AAAAAGATCATAGACAAGGGGCCAGACCACATCAAATCTTTATTCTACCCATTCTTCTCCCCCATAAGCTaGAAATGTTCATGGAAAACA +
Preference number: 5 (lower is better)
Translates to: KKIIDKGPDHIKSLFYPFFSPIS*KCSWKT
Trigger: TGTTTTCCATGAACATTTCAAGCTTATGGGGGAGAA...GAATGGGTAGAATAAAGATTTGATGTGGTCTGGCCCCTTGTCTATGATCTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
CDS-3UTR CAA 90 bp AATCAAGCTAAAAAGATCATAGACAAGGGGCCAGACCACATCAAATCTTTATTCTTCTCCCCCATAAGCTaGAAATGTTCATGGAAAACA +
Preference number: 5 (lower is better)
Translates to: NQAKKIIDKGPDHIKSLFFSPIS*KCSWKT
Trigger: TGTTTTCCATGAACATTTCAAGCTTATGGGGGAGAA...GAATAAAGATTTGATGTGGTCTGGCCCCTTGTCTATGATCTTTTTAGCTTGATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
CDS-3UTR CAA 90 bp AACAGACTTATACCCCTACCCTTAGTCACATTGCACAGTGATGTAAATGAAAAATCTTTAGGAAATCCTTaGGAGAAGGTACTTCAACTT +
Preference number: 5 (lower is better)
Translates to: NRLIPLPLVTLHSDVNEKSLGNP*EKVLQL
Trigger: AAGTTGAAGTACCTTCTCCAAAGGATTTCCTAAAGA...TTTTTCATTTACATCACTGTGCAATGTGACTAAGGGTAGGGGTATAAGTCTGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000331161.9
CDS-3UTR CAA 90 bp ATACATCTTTTGCATTTGTGGAGCTCAGAAACAATGTGTTGGAGACAGTTTAGAAGGAAAATACATCTTTaGCATTTGTGGAGCTCAGAA +
Preference number: 5 (lower is better)
Translates to: IHLLHLWSSETMCWRQFRRKIHL*HLWSSE
Trigger: TTCTGAGCTCCACAAATGCAAAAGATGTATTTTCCT...TCTAAACTGTCTCCAACACATTGTTTCTGAGCTCCACAAATGCAAAAGATGTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331161.9
ENST00000496261.6
ENST00000615958.4
CDS CAA 90 bp CCAGACACATCCAGATATGGAAAATCAACTTTATCCCAGGCTTTCTaGTGCCGCTCCTCCAGCCGCCTGCTCTGTTGGGTGCAGCTCCTT +
Preference number: 6 (lower is better)
Translates to: PDTSRYGKSTLSQAF*CRSSSRLLCWVQLL
Trigger: AAGGAGCTGCACCCAACAGAGCAGGCGGCTGGAGGAGCGGCACAAGAAAGCCTGGGATAAAGTTGATTTTCCATATCTGGATGTGTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615958.4
CDS GCA 72 bp CTGGGGAGCCACCTCCAGTCACCCGCTCTGTCTTCATaGTCCGTGGTGAACAATCTCCATAAGAAGTTCATA +
Preference number: 6 (lower is better)
Translates to: LGSHLQSPALSS*SVVNNLHKKFI
Trigger: TATGAACTTCTTATGGAGATTGTTCACCACGGAGCATGAAGACAGAGCGGGTGACTGGAGGTGGCTCCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615958.4
CDS CCA 72 bp GAAGTTCATAGGTGTTGGACACGTGTGGCCAGGCCCTaGGCTTTGAAATCGACCCTGGTTTGCAGCTATATG +
Preference number: 6 (lower is better)
Translates to: EVHRCWTRVARP*ALKSTLVCSYM
Trigger: CATATAGCTGCAAACCAGGGTCGATTTCAAAGCCCAGGGCCTGGCCACACGTGTCCAACACCTATGAACTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615958.4
CDS CAA 72 bp TCCAGATATGGAAAATCAACTTTATCCCAGGCTTTCTaGTGCCGCTCCTCCAGCCGCCTGCTCTGTTGGGTG +
Preference number: 6 (lower is better)
Translates to: SRYGKSTLSQAF*CRSSSRLLCWV
Trigger: CACCCAACAGAGCAGGCGGCTGGAGGAGCGGCACAAGAAAGCCTGGGATAAAGTTGATTTTCCATATCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615958.4
CDS CCA 72 bp ACTCTGTATTCCCATGACAGGATGATCAGTCTTCAATaGCACAGCAGGCTTTTTGGGCACGTTCCGATCAAA +
Preference number: 6 (lower is better)
Translates to: TLYSHDRMISLQ*HSRLFGHVPIK
Trigger: TTTGATCGGAACGTGCCCAAAAAGCCTGCTGTGCCATTGAAGACTGATCATCCTGTCATGGGAATACAGAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000331161.9
ENST00000376363.5
ENST00000483339.2
ENST00000496261.6
ENST00000615958.4
CDS CCA 72 bp AGCTATATGGTTGATGCTGCCAGACACATCCAGATATaGAAAATCAACTTTATCCCAGGCTTTCTTGTGCCG +
Preference number: 6 (lower is better)
Translates to: SYMVDAARHIQI*KINFIPGFLVP
Trigger: CGGCACAAGAAAGCCTGGGATAAAGTTGATTTTCCATATCTGGATGTGTCTGGCAGCATCAACCATATAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615958.4
CDS CAA 90 bp CCAATGTCGTGTTCTAGTTGTTTCATTTCTTCTTCCAGCCTCTGCTaGCGGATCTTCTTTGGTATAGAATCTATAAAGACCGAGAGGGAC +
Preference number: 6 (lower is better)
Translates to: PMSCSSCFISSSSLC*RIFFGIESIKTERD
Trigger: GTCCCTCTCGGTCTTTATAGATTCTATACCAAAGAAGATCCGCAAGCAGAGGCTGGAAGAAGAAATGAAACAACTAGAACACGACATTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331161.9
ENST00000376363.5
ENST00000496261.6
ENST00000615958.4
CDS GCA 72 bp TGCCTCCCTTTCTTCATCGGAGAGCCTTTTCATAGCTaGTTTCTTAAGGTTTTCCTGGATATAACGATCATA +
Preference number: 6 (lower is better)
Translates to: CLPFFIGEPFHS*FLKVFLDITII
Trigger: TATGATCGTTATATCCAGGAAAACCTTAAGAAAGCAGCTATGAAAAGGCTCTCCGATGAAGAAAGGGAGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000331161.9
ENST00000376363.5
ENST00000483339.2
ENST00000496261.6
ENST00000615958.4
CDS GCA 72 bp TCGTGTTCTAGTTGTTTCATTTCTTCTTCCAGCCTCTaGTTGCGGATCTTCTTTGGTATAGAATCTATAAAG +
Preference number: 6 (lower is better)
Translates to: SCSSCFISSSSL*LRIFFGIESIK
Trigger: CTTTATAGATTCTATACCAAAGAAGATCCGCAAGCAGAGGCTGGAAGAAGAAATGAAACAACTAGAACACGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331161.9
ENST00000376363.5
ENST00000496261.6
ENST00000615958.4
CDS CCA 72 bp TTCTTTGGTATAGAATCTATAAAGACCGAGAGGGACTaGAATTCTTTATGCACCTCTTCCCAGTTCTTTTTC +
Preference number: 6 (lower is better)
Translates to: FFGIESIKTERD*NSLCTSSQFFF
Trigger: GAAAAAGAACTGGGAAGAGGTGCATAAAGAATTCCAGTCCCTCTCGGTCTTTATAGATTCTATACCAAAGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000331161.9
ENST00000376363.5
ENST00000496261.6
ENST00000615958.4
CDS CAA 90 bp AGCTGCTTTCTTAAGGTTTTCCTGGATATAACGATCATAGTCTTCTaGGGCTTTCTTTATTTCCTCGTTTCGCTTACATATGTATTCAGG +
Preference number: 6 (lower is better)
Translates to: SCFLKVFLDITIIVF*GFLYFLVSLTYVFR
Trigger: CCTGAATACATATGTAAGCGAAACGAGGAAATAAAGAAAGCCCAAGAAGACTATGATCGTTATATCCAGGAAAACCTTAAGAAAGCAGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331161.9
ENST00000376363.5
ENST00000483339.2
ENST00000496261.6
ENST00000615958.4
CDS CAA 72 bp CTTAAGGTTTTCCTGGATATAACGATCATAGTCTTCTaGGGCTTTCTTTATTTCCTCGTTTCGCTTACATAT +
Preference number: 6 (lower is better)
Translates to: LKVFLDITIIVF*GFLYFLVSLTY
Trigger: ATATGTAAGCGAAACGAGGAAATAAAGAAAGCCCAAGAAGACTATGATCGTTATATCCAGGAAAACCTTAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000331161.9
ENST00000376363.5
ENST00000483339.2
ENST00000496261.6
ENST00000615958.4