RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ENKD1 (Homo sapiens)

Ensembl gene IDs: ENSG00000124074

Ensembl transcript IDs: ENST00000243878.9, ENST00000602409.2, ENST00000602415.2, ENST00000602531.1, ENST00000602642.1, ENST00000602644.5, ENST00000602942.5

Found 193 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ATGGCCTCCTCTACCTGCACCAGCTTCCGGTCCAGCTCAGCACGGTaGCTCTGGGCTCTCAGTGAGTCTGCCCCAGCAGGCAGCAGTACC +
Preference number: 1 (lower is better)
Translates to: MASSTCTSFRSSSAR*LWALSESAPAGSST
Trigger: GGTACTGCTGCCTGCTGGGGCAGACTCACTGAGAGCCCAGAGCCACCGTGCTGAGCTGGACCGGAAGCTGGTGCAGGTAGAGGAGGCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602644.5
3UTR CCA 90 bp TCCTCTACCTGCACCAGCTTCCGGTCCAGCTCAGCACGGTGGCTCTaGGCTCTCAGTGAGTCTGCCCCAGCAGGCAGCAGTACCAGCTCA +
Preference number: 1 (lower is better)
Translates to: SSTCTSFRSSSARWL*ALSESAPAGSSTSS
Trigger: TGAGCTGGTACTGCTGCCTGCTGGGGCAGACTCACTGAGAGCCCAGAGCCACCGTGCTGAGCTGGACCGGAAGCTGGTGCAGGTAGAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602644.5
3UTR CCA 90 bp ACCTCTGCTCTGGGATTGGGTCCAACCCTGTCCTTTGCAGCCATGTaGCGATCCTCAGCATGGAGCTCCTTGCCACTGTCCCCCAAAGGG +
Preference number: 1 (lower is better)
Translates to: TSALGLGPTLSFAAM*RSSAWSSLPLSPKG
Trigger: CCCTTTGGGGGACAGTGGCAAGGAGCTCCATGCTGAGGATCGCCACATGGCTGCAAAGGACAGGGTTGGACCCAATCCCAGAGCAGAGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243878.9
ENST00000602644.5
3UTR CCA 90 bp TTGGGTCCAACCCTGTCCTTTGCAGCCATGTGGCGATCCTCAGCATaGAGCTCCTTGCCACTGTCCCCCAAAGGGGCTCAGTCGTCCATC +
Preference number: 1 (lower is better)
Translates to: LGPTLSFAAMWRSSA*SSLPLSPKGAQSSI
Trigger: GATGGACGACTGAGCCCCTTTGGGGGACAGTGGCAAGGAGCTCCATGCTGAGGATCGCCACATGGCTGCAAAGGACAGGGTTGGACCCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602644.5
3UTR GCA 90 bp CCCTGTCCTTTGCAGCCATGTGGCGATCCTCAGCATGGAGCTCCTTaGCACTGTCCCCCAAAGGGGCTCAGTCGTCCATCTTCACGAAGA +
Preference number: 1 (lower is better)
Translates to: PCPLQPCGDPQHGAP*HCPPKGLSRPSSRR
Trigger: TCTTCGTGAAGATGGACGACTGAGCCCCTTTGGGGGACAGTGGCAAGGAGCTCCATGCTGAGGATCGCCACATGGCTGCAAAGGACAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602644.5
3UTR GCA 90 bp CTGTCTTCAGACCTCTGCTCTGGGATTGGGTCCAACCCTGTCCTTTaGAGCCATGTGGCGATCCTCAGCATGGAGCTCCTTGCCACTGTC +
Preference number: 1 (lower is better)
Translates to: LSSDLCSGIGSNPVL*SHVAILSMELLATV
Trigger: GACAGTGGCAAGGAGCTCCATGCTGAGGATCGCCACATGGCTGCAAAGGACAGGGTTGGACCCAATCCCAGAGCAGAGGTCTGAAGACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243878.9
ENST00000602644.5
3UTR TCA 90 bp CTCAGTCGTCCATCTTCACGAAGACTTTGGGCCGAGAAAAGATCTTaGTGGCCTCCTCTACCTGCACCAGCTTCCGGTCCAGCTCAGCAC +
Preference number: 1 (lower is better)
Translates to: LSRPSSRRLWAEKRS*WPPLPAPASGPAQH
Trigger: GTGCTGAGCTGGACCGGAAGCTGGTGCAGGTAGAGGAGGCCATCAAGATCTTTTCTCGGCCCAAAGTCTTCGTGAAGATGGACGACTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602644.5
3UTR-3UTR GCA 90 bp GCTAGGGTGGCCCTTCTGCAGCCACTGGTGACTGGGAAGAGTGCTCTAGGGACAATGGCCTCCTCTACCTaGACCAGCTTCCGGTCCAGC +
Preference number: 2 (lower is better)
Translates to: ARVALLQPLVTGKSALGTMASST*TSFRSS
Trigger: GCTGGACCGGAAGCTGGTGCAGGTAGAGGAGGCCAT...TGTCCCTAGAGCACTCTTCCCAGTCACCAGTGGCTGCAGAAGGGCCACCCTAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602644.5
3UTR CAA 90 bp ACCCTGTCCTTTGCAGCCATGTGGCGATCCTCAGCATGGAGCTCCTaGCCACTGTCCCCCAAAGGGGCTCAGTCGTCCATCTTCACGAAG +
Preference number: 2 (lower is better)
Translates to: TLSFAAMWRSSAWSS*PLSPKGAQSSIFTK
Trigger: CTTCGTGAAGATGGACGACTGAGCCCCTTTGGGGGACAGTGGCAAGGAGCTCCATGCTGAGGATCGCCACATGGCTGCAAAGGACAGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602644.5
3UTR-3UTR CCA 90 bp TCAGACCTCTGCTCTGGGATTGGGTCCAACCCTGTCCTTTGCAGCCATGTGGCGTGGCGATCCTCAGCATaGAGCTCCTTGCCACTGTCC +
Preference number: 2 (lower is better)
Translates to: SDLCSGIGSNPVLCSHVAWRSSA*SSLPLS
Trigger: GGACAGTGGCAAGGAGCTCCATGCTGAGGATCGCCA...CGCCACATGGCTGCAAAGGACAGGGTTGGACCCAATCCCAGAGCAGAGGTCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243878.9
ENST00000602644.5
3UTR CAA 90 bp CCTGTCTTCAGACCTCTGCTCTGGGATTGGGTCCAACCCTGTCCTTaGCAGCCATGTGGCGATCCTCAGCATGGAGCTCCTTGCCACTGT +
Preference number: 2 (lower is better)
Translates to: PVFRPLLWDWVQPCP*QPCGDPQHGAPCHC
Trigger: ACAGTGGCAAGGAGCTCCATGCTGAGGATCGCCACATGGCTGCAAAGGACAGGGTTGGACCCAATCCCAGAGCAGAGGTCTGAAGACAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243878.9
ENST00000602644.5
3UTR-3UTR CCA 90 bp AACCCTGTCCTTTGCAGCCATGTGGCGATCCTCAGCATGGAGCTCCTTGCCACTTGGCGATCCTCAGCATaGAGCTCCTTGCCACTGTCC +
Preference number: 2 (lower is better)
Translates to: NPVLCSHVAILSMELLATWRSSA*SSLPLS
Trigger: GGACAGTGGCAAGGAGCTCCATGCTGAGGATCGCCA...AGTGGCAAGGAGCTCCATGCTGAGGATCGCCACATGGCTGCAAAGGACAGGGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243878.9
ENST00000602644.5
3UTR-3UTR CCA 90 bp TCAGACCTCTGCTCTGGGATTGGGTCCAACCCTGTCCTTTGCAGCCATGTGGCGTCCTTTGCAGCCATGTaGCGATCCTCAGCATGGAGC +
Preference number: 2 (lower is better)
Translates to: SDLCSGIGSNPVLCSHVASFAAM*RSSAWS
Trigger: GCTCCATGCTGAGGATCGCCACATGGCTGCAAAGGA...CGCCACATGGCTGCAAAGGACAGGGTTGGACCCAATCCCAGAGCAGAGGTCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243878.9
ENST00000602644.5
3UTR-3UTR CCA 90 bp CTTGCCACTGTCCCCCAAAGGGGCTCAGTCGTCCATCTTCACGAAGACTTTGGGGGCTCTGGAGCAGCTTaGTCAGTGTTTCCAGCCGCT +
Preference number: 2 (lower is better)
Translates to: LATVPQRGSVVHLHEDFGGSGAA*SVFPAA
Trigger: AGCGGCTGGAAACACTGACCAAGCTGCTCCAGAGCC...CCCAAAGTCTTCGTGAAGATGGACGACTGAGCCCCTTTGGGGGACAGTGGCAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000602644.5
3UTR-3UTR GCA 90 bp AGGGGCTCAGTCGTCCATCTTCACGAAGACTTTGGGCCGAGAAAAGATCTTGATTCCAACCCTGTCCTTTaGAGCCATGTGGCGATCCTC +
Preference number: 2 (lower is better)
Translates to: RGSVVHLHEDFGPRKDLDSNPVL*SHVAIL
Trigger: GAGGATCGCCACATGGCTGCAAAGGACAGGGTTGGA...ATCAAGATCTTTTCTCGGCCCAAAGTCTTCGTGAAGATGGACGACTGAGCCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602644.5
3UTR CCA 72 bp TGCACCAGCTTCCGGTCCAGCTCAGCACGGTGGCTCTaGGCTCTCAGTGAGTCTGCCCCAGCAGGCAGCAGT +
Preference number: 3 (lower is better)
Translates to: CTSFRSSSARWL*ALSESAPAGSS
Trigger: ACTGCTGCCTGCTGGGGCAGACTCACTGAGAGCCCAGAGCCACCGTGCTGAGCTGGACCGGAAGCTGGTGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602644.5
3UTR CCA 72 bp TCTACCTGCACCAGCTTCCGGTCCAGCTCAGCACGGTaGCTCTGGGCTCTCAGTGAGTCTGCCCCAGCAGGC +
Preference number: 3 (lower is better)
Translates to: STCTSFRSSSAR*LWALSESAPAG
Trigger: GCCTGCTGGGGCAGACTCACTGAGAGCCCAGAGCCACCGTGCTGAGCTGGACCGGAAGCTGGTGCAGGTAGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602644.5
3UTR CCA 72 bp ACCCTGTCCTTTGCAGCCATGTGGCGATCCTCAGCATaGAGCTCCTTGCCACTGTCCCCCAAAGGGGCTCAG +
Preference number: 3 (lower is better)
Translates to: TLSFAAMWRSSA*SSLPLSPKGAQ
Trigger: CTGAGCCCCTTTGGGGGACAGTGGCAAGGAGCTCCATGCTGAGGATCGCCACATGGCTGCAAAGGACAGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602644.5
3UTR-3UTR CAA 90 bp CCTTCTGCAGCCACTGGTGACTGGGAAGAGTGCTCTAGGGACACTGGCCACCCCGGCCGAGAAAAGATCTaGATGGCCTCCTCTACCTGC +
Preference number: 3 (lower is better)
Translates to: PSAATGDWEECSRDTGHPGREKI*MASSTC
Trigger: GCAGGTAGAGGAGGCCATCAAGATCTTTTCTCGGCC...GGGGTGGCCAGTGTCCCTAGAGCACTCTTCCCAGTCACCAGTGGCTGCAGAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602644.5
3UTR GCA 72 bp TTGCAGCCATGTGGCGATCCTCAGCATGGAGCTCCTTaGCACTGTCCCCCAAAGGGGCTCAGTCGTCCATCT +
Preference number: 3 (lower is better)
Translates to: LQPCGDPQHGAP*HCPPKGLSRPS
Trigger: AGATGGACGACTGAGCCCCTTTGGGGGACAGTGGCAAGGAGCTCCATGCTGAGGATCGCCACATGGCTGCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602644.5
3UTR CCA 72 bp CTGGGATTGGGTCCAACCCTGTCCTTTGCAGCCATGTaGCGATCCTCAGCATGGAGCTCCTTGCCACTGTCC +
Preference number: 3 (lower is better)
Translates to: LGLGPTLSFAAM*RSSAWSSLPLS
Trigger: GGACAGTGGCAAGGAGCTCCATGCTGAGGATCGCCACATGGCTGCAAAGGACAGGGTTGGACCCAATCCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243878.9
ENST00000602644.5
3UTR-3UTR CAA 90 bp AACCCTGTCCTTTGCAGCCATGTGGCGATCCTCAGCATGGAGCTCCTTGCCACTGTCCAACCCTGTCCTTaGCAGCCATGTGGCGATCCT +
Preference number: 3 (lower is better)
Translates to: NPVLCSHVAILSMELLATVQPCP*QPCGDP
Trigger: AGGATCGCCACATGGCTGCAAAGGACAGGGTTGGAC...AGTGGCAAGGAGCTCCATGCTGAGGATCGCCACATGGCTGCAAAGGACAGGGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243878.9
ENST00000602644.5
3UTR GCA 72 bp GACCTCTGCTCTGGGATTGGGTCCAACCCTGTCCTTTaGAGCCATGTGGCGATCCTCAGCATGGAGCTCCTT +
Preference number: 3 (lower is better)
Translates to: DLCSGIGSNPVL*SHVAILSMELL
Trigger: AAGGAGCTCCATGCTGAGGATCGCCACATGGCTGCAAAGGACAGGGTTGGACCCAATCCCAGAGCAGAGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243878.9
ENST00000602644.5
3UTR-3UTR CAA 90 bp CACGAAGACTTTGGGCCGAGAAAAGATCTTGATGGCCTCCTCTACCTGCACCAGGTCCAACCCTGTCCTTaGCAGCCATGTGGCGATCCT +
Preference number: 3 (lower is better)
Translates to: HEDFGPRKDLDGLLYLHQVQPCP*QPCGDP
Trigger: AGGATCGCCACATGGCTGCAAAGGACAGGGTTGGAC...CTGGTGCAGGTAGAGGAGGCCATCAAGATCTTTTCTCGGCCCAAAGTCTTCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602644.5
3UTR TCA 72 bp CCATCTTCACGAAGACTTTGGGCCGAGAAAAGATCTTaGTGGCCTCCTCTACCTGCACCAGCTTCCGGTCCA +
Preference number: 3 (lower is better)
Translates to: PSSRRLWAEKRS*WPPLPAPASGP
Trigger: TGGACCGGAAGCTGGTGCAGGTAGAGGAGGCCATCAAGATCTTTTCTCGGCCCAAAGTCTTCGTGAAGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602644.5
CDS-3UTR GCA 90 bp GTGGCCCTTCTGCAGCCACTGGTGACTGGGAAGAGTGCTCTAGGGACACTGGCCGCCGCCCAGCAACGGTaGCCCGAGGCCTGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: VALLQPLVTGKSALGTLAAAQQR*PEACRA
Trigger: AGCCCTGCAGGCCTCGGGGCACCGTTGCTGGGCGGC...GGCCAGTGTCCCTAGAGCACTCTTCCCAGTCACCAGTGGCTGCAGAAGGGCCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243878.9
ENST00000602644.5
CDS-3UTR GCA 90 bp GCCACTGTCCCCCAAAGGGGCTCAGTCGTCCATCTTCACGAAGACTTTGGGCCGGGCCTGGGCTGGCCCTaGTCCCGGCTGCGCTCCTGT +
Preference number: 4 (lower is better)
Translates to: ATVPQRGSVVHLHEDFGPGLGWP*SRLRSC
Trigger: ACAGGAGCGCAGCCGGGAGCAGGGCCAGCCCAGGCC...CGGCCCAAAGTCTTCGTGAAGATGGACGACTGAGCCCCTTTGGGGGACAGTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602644.5
CDS-3UTR GCA 90 bp GCTAGGGTGGCCCTTCTGCAGCCACTGGTGACTGGGAAGAGTGCTCTAGGGACAGGGCCGCAGCGGGAGTaGGCCCGCAGGAAGTGGGCA +
Preference number: 4 (lower is better)
Translates to: ARVALLQPLVTGKSALGTGPQRE*ARRKWA
Trigger: TGCCCACTTCCTGCGGGCGCACTCCCGCTGCGGCCC...TGTCCCTAGAGCACTCTTCCCAGTCACCAGTGGCTGCAGAAGGGCCACCCTAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243878.9
ENST00000602644.5
CDS-3UTR GCA 90 bp GCCACTGTCCCCCAAAGGGGCTCAGTCGTCCATCTTCACGAAGACTTTGGGCCGGGGTCCGGCTGGCTCTaGTTGCGGGCCTCGGCCTCC +
Preference number: 4 (lower is better)
Translates to: ATVPQRGSVVHLHEDFGPGSGWL*LRASAS
Trigger: GGAGGCCGAGGCCCGCAAGCAGAGCCAGCCGGACCC...CGGCCCAAAGTCTTCGTGAAGATGGACGACTGAGCCCCTTTGGGGGACAGTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000602644.5
CDS-3UTR CCA 90 bp TCTGGGCTCTCAGTGAGTCTGCCCCAGCAGGCAGCAGTACCAGCTCACGCAGCATCCCCGACGCCGCGCTaGCCGCGCTCCAGGATCTCT +
Preference number: 4 (lower is better)
Translates to: SGLSVSLPQQAAVPAHAASPTPR*PRSRIS
Trigger: AGAGATCCTGGAGCGCGGCCAGCGCGGCGTCGGGGA...TGCTGCGTGAGCTGGTACTGCTGCCTGCTGGGGCAGACTCACTGAGAGCCCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602644.5
CDS-3UTR CCA 90 bp GTGGCCCTTCTGCAGCCACTGGTGACTGGGAAGAGTGCTCTAGGGACACTGGCCGCAGGGCCAGGCTCCTaGAGCTGGGCCTTGACCCGG +
Preference number: 4 (lower is better)
Translates to: VALLQPLVTGKSALGTLAAGPGS*SWALTR
Trigger: CCGGGTCAAGGCCCAGCTCCAGGAGCCTGGCCCTGC...GGCCAGTGTCCCTAGAGCACTCTTCCCAGTCACCAGTGGCTGCAGAAGGGCCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243878.9
ENST00000602644.5
CDS-3UTR GCA 90 bp GGGTCCAACCCTGTCCTTTGCAGCCATGTGGCGATCCTCAGCATGGAGCTCCTTGCCGCCCAGCAACGGTaGCCCGAGGCCTGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: GSNPVLCSHVAILSMELLAAQQR*PEACRA
Trigger: AGCCCTGCAGGCCTCGGGGCACCGTTGCTGGGCGGC...AAGGAGCTCCATGCTGAGGATCGCCACATGGCTGCAAAGGACAGGGTTGGACCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243878.9
ENST00000602644.5
CDS-3UTR GCA 90 bp CCTCTGCTCTGGGATTGGGTCCAACCCTGTCCTTTGCAGCCATGTGGCGATCCTGGCCTGGGCTGGCCCTaGTCCCGGCTGCGCTCCTGT +
Preference number: 4 (lower is better)
Translates to: PLLWDWVQPCPLQPCGDPGLGWP*SRLRSC
Trigger: ACAGGAGCGCAGCCGGGAGCAGGGCCAGCCCAGGCC...AGGATCGCCACATGGCTGCAAAGGACAGGGTTGGACCCAATCCCAGAGCAGAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243878.9
ENST00000602644.5
CDS-3UTR GCA 90 bp GGGTCCAACCCTGTCCTTTGCAGCCATGTGGCGATCCTCAGCATGGAGCTCCTTGGGCCGCAGCGGGAGTaGGCCCGCAGGAAGTGGGCA +
Preference number: 4 (lower is better)
Translates to: GSNPVLCSHVAILSMELLGPQRE*ARRKWA
Trigger: TGCCCACTTCCTGCGGGCGCACTCCCGCTGCGGCCC...AAGGAGCTCCATGCTGAGGATCGCCACATGGCTGCAAAGGACAGGGTTGGACCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243878.9
ENST00000602644.5
CDS-3UTR CCA 90 bp GCTAGGGTGGCCCTTCTGCAGCCACTGGTGACTGGGAAGAGTGCTCTAGGGACAGCAGGGCCAGGCTCCTaGAGCTGGGCCTTGACCCGG +
Preference number: 4 (lower is better)
Translates to: ARVALLQPLVTGKSALGTAGPGS*SWALTR
Trigger: CCGGGTCAAGGCCCAGCTCCAGGAGCCTGGCCCTGC...TGTCCCTAGAGCACTCTTCCCAGTCACCAGTGGCTGCAGAAGGGCCACCCTAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243878.9
ENST00000602644.5
CDS-3UTR GCA 90 bp TCTGGGCTCTCAGTGAGTCTGCCCCAGCAGGCAGCAGTACCAGCTCACGCAGCACACCTCCGCGACCTCTaGTCCCAGCCCACTTCTCGG +
Preference number: 4 (lower is better)
Translates to: SGLSVSLPQQAAVPAHAAHLRDL*SQPTSR
Trigger: CCGAGAAGTGGGCTGGGAGCAGAGGTCGCGGAGGTG...TGCTGCGTGAGCTGGTACTGCTGCCTGCTGGGGCAGACTCACTGAGAGCCCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602644.5
CDS-3UTR GCA 90 bp CTTCAGACCTCTGCTCTGGGATTGGGTCCAACCCTGTCCTTTGCAGCCATGTGGGGGTCCGGCTGGCTCTaGTTGCGGGCCTCGGCCTCC +
Preference number: 4 (lower is better)
Translates to: LQTSALGLGPTLSFAAMWGSGWL*LRASAS
Trigger: GGAGGCCGAGGCCCGCAAGCAGAGCCAGCCGGACCC...CCACATGGCTGCAAAGGACAGGGTTGGACCCAATCCCAGAGCAGAGGTCTGAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243878.9
ENST00000602644.5
CDS-3UTR CCA 90 bp TCCAACCCTGTCCTTTGCAGCCATGTGGCGATCCTCAGCATGGAGCTCCTTGCCGAGCTTTCAGGGGCCTaGGCTGGCCCTGCTCCCGGC +
Preference number: 4 (lower is better)
Translates to: SNPVLCSHVAILSMELLAELSGA*AGPAPG
Trigger: GCCGGGAGCAGGGCCAGCCCAGGCCCCTGAAAGCTC...GGCAAGGAGCTCCATGCTGAGGATCGCCACATGGCTGCAAAGGACAGGGTTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243878.9
ENST00000602644.5
CDS-3UTR CCA 90 bp CCAACCCTGTCCTTTGCAGCCATGTGGCGATCCTCAGCATGGAGCTCCTTGCCACATGCGCGTGTGGCCTaGGGGCATGGCAGGGTCCGG +
Preference number: 4 (lower is better)
Translates to: PTLSFAAMWRSSAWSSLPHARVA*GHGRVR
Trigger: CCGGACCCTGCCATGCCCCCAGGCCACACGCGCATG...TGGCAAGGAGCTCCATGCTGAGGATCGCCACATGGCTGCAAAGGACAGGGTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243878.9
ENST00000602644.5
CDS-3UTR CCA 90 bp TCCAACCCTGTCCTTTGCAGCCATGTGGCGATCCTCAGCATGGAGCTCCTTGCCCATGCGCGTGTGGCCTaGGGGCATGGCAGGGTCCGG +
Preference number: 4 (lower is better)
Translates to: SNPVLCSHVAILSMELLAHARVA*GHGRVR
Trigger: CCGGACCCTGCCATGCCCCCAGGCCACACGCGCATG...GGCAAGGAGCTCCATGCTGAGGATCGCCACATGGCTGCAAAGGACAGGGTTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243878.9
ENST00000602644.5
CDS-3UTR TCA 90 bp GCTAGGGTGGCCCTTCTGCAGCCACTGGTGACTGGGAAGAGTGCTCTAGGGACACCTGGAGCTGGGCCTTaGCCCGGGACTCCACCTTGT +
Preference number: 4 (lower is better)
Translates to: ARVALLQPLVTGKSALGTPGAGP*PGTPPC
Trigger: ACAAGGTGGAGTCCCGGGTCAAGGCCCAGCTCCAGG...TGTCCCTAGAGCACTCTTCCCAGTCACCAGTGGCTGCAGAAGGGCCACCCTAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243878.9
ENST00000602644.5
CDS-3UTR GCA 90 bp GCTAGGGTGGCCCTTCTGCAGCCACTGGTGACTGGGAAGAGTGCTCTAGGGACACGGTGCCCCGAGGCCTaGAGGGCTGTTTACCTCCCT +
Preference number: 4 (lower is better)
Translates to: ARVALLQPLVTGKSALGTRCPEA*RAVYLP
Trigger: AGGGAGGTAAACAGCCCTGCAGGCCTCGGGGCACCG...TGTCCCTAGAGCACTCTTCCCAGTCACCAGTGGCTGCAGAAGGGCCACCCTAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243878.9
ENST00000602644.5
CDS-3UTR GCA 90 bp GGCTCTGGGCTCTCAGTGAGTCTGCCCCAGCAGGCAGCAGTACCAGCTCACGCAGAGATCCCCTCGAGTTaGAACAGCACGTCCCCGACG +
Preference number: 4 (lower is better)
Translates to: GSGLSVSLPQQAAVPAHAEIPSS*NSTSPT
Trigger: CGTCGGGGACGTGCTGTTGCAACTCGAGGGGATCTC...TGCGTGAGCTGGTACTGCTGCCTGCTGGGGCAGACTCACTGAGAGCCCAGAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000602644.5
CDS-3UTR GCA 90 bp GTGGCCCTTCTGCAGCCACTGGTGACTGGGAAGAGTGCTCTAGGGACACTGGCCTGGGCCTGCCGCTGCTaGTCTAGCACTTGTGCCAGG +
Preference number: 4 (lower is better)
Translates to: VALLQPLVTGKSALGTLAWACRC*SSTCAR
Trigger: CCTGGCACAAGTGCTAGAGCAGCAGCGGCAGGCCCA...GGCCAGTGTCCCTAGAGCACTCTTCCCAGTCACCAGTGGCTGCAGAAGGGCCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243878.9
CDS-3UTR CCA 90 bp GCTCCTGTCTTCAGACCTCTGCTCTGGGATTGGGTCCAACCCTGTCCTTTGCAGGAGCTTTCAGGGGCCTaGGCTGGCCCTGCTCCCGGC +
Preference number: 4 (lower is better)
Translates to: APVFRPLLWDWVQPCPLQELSGA*AGPAPG
Trigger: GCCGGGAGCAGGGCCAGCCCAGGCCCCTGAAAGCTC...CTGCAAAGGACAGGGTTGGACCCAATCCCAGAGCAGAGGTCTGAAGACAGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243878.9
ENST00000602644.5
CDS-3UTR CCA 90 bp CTCTGCTCTGGGATTGGGTCCAACCCTGTCCTTTGCAGCCATGTGGCGATCCTCTCAGGCATGCGCGTGTaGCCTGGGGGCATGGCAGGG +
Preference number: 4 (lower is better)
Translates to: LCSGIGSNPVLCSHVAILSGMRV*PGGMAG
Trigger: CCCTGCCATGCCCCCAGGCCACACGCGCATGCCTGA...GAGGATCGCCACATGGCTGCAAAGGACAGGGTTGGACCCAATCCCAGAGCAGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243878.9
ENST00000602644.5
CDS-3UTR TCA 90 bp CTCTGCTCTGGGATTGGGTCCAACCCTGTCCTTTGCAGCCATGTGGCGATCCTCCCTGGAGCTGGGCCTTaGCCCGGGACTCCACCTTGT +
Preference number: 4 (lower is better)
Translates to: LCSGIGSNPVLCSHVAILPGAGP*PGTPPC
Trigger: ACAAGGTGGAGTCCCGGGTCAAGGCCCAGCTCCAGG...GAGGATCGCCACATGGCTGCAAAGGACAGGGTTGGACCCAATCCCAGAGCAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243878.9
ENST00000602644.5
CDS-3UTR GCA 90 bp GGTCCAACCCTGTCCTTTGCAGCCATGTGGCGATCCTCAGCATGGAGCTCCTTGCACCTCCGCGACCTCTaGTCCCAGCCCACTTCTCGG +
Preference number: 4 (lower is better)
Translates to: GPTLSFAAMWRSSAWSSLHLRDL*SQPTSR
Trigger: CCGAGAAGTGGGCTGGGAGCAGAGGTCGCGGAGGTG...CAAGGAGCTCCATGCTGAGGATCGCCACATGGCTGCAAAGGACAGGGTTGGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243878.9
ENST00000602644.5
CDS-3UTR GCA 90 bp CCCTGTCCTTTGCAGCCATGTGGCGATCCTCAGCATGGAGCTCCTTGCCACTGTGCTGGTTCTCAGGCATaGGCGTGTGGCCTGGGGGCA +
Preference number: 4 (lower is better)
Translates to: PCPLQPCGDPQHGAPCHCAGSQA*ACGLGA
Trigger: TGCCCCCAGGCCACACGCGCATGCCTGAGAACCAGC...ACAGTGGCAAGGAGCTCCATGCTGAGGATCGCCACATGGCTGCAAAGGACAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243878.9
ENST00000602644.5
CDS-3UTR CCA 90 bp ACCCTGTCCTTTGCAGCCATGTGGCGATCCTCAGCATGGAGCTCCTTGCCACTGACAGAGCGTCGGGTCTaGGGGGATGGGCCCCGAGAT +
Preference number: 4 (lower is better)
Translates to: TLSFAAMWRSSAWSSLPLTERRV*GDGPRD
Trigger: ATCTCGGGGCCCATCCCCCCAGACCCGACGCTCTGT...CAGTGGCAAGGAGCTCCATGCTGAGGATCGCCACATGGCTGCAAAGGACAGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243878.9
ENST00000602644.5
CDS-3UTR CCA 90 bp CTGTCTTCAGACCTCTGCTCTGGGATTGGGTCCAACCCTGTCCTTTGCAGCCATTCCCCGACGCCGCGCTaGCCGCGCTCCAGGATCTCT +
Preference number: 4 (lower is better)
Translates to: LSSDLCSGIGSNPVLCSHSPTPR*PRSRIS
Trigger: AGAGATCCTGGAGCGCGGCCAGCGCGGCGTCGGGGA...ATGGCTGCAAAGGACAGGGTTGGACCCAATCCCAGAGCAGAGGTCTGAAGACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243878.9
ENST00000602644.5
CDS-3UTR CCA 90 bp TCAGACCTCTGCTCTGGGATTGGGTCCAACCCTGTCCTTTGCAGCCATGTGGCGAGATACATGGGGTGGTaGGAGGCCAGGGCCGCAGCG +
Preference number: 4 (lower is better)
Translates to: SDLCSGIGSNPVLCSHVARYMGW*EARAAA
Trigger: CGCTGCGGCCCTGGCCTCCCACCACCCCATGTATCT...CGCCACATGGCTGCAAAGGACAGGGTTGGACCCAATCCCAGAGCAGAGGTCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243878.9
ENST00000602644.5
CDS-3UTR CCA 90 bp TGGCTCTGGGCTCTCAGTGAGTCTGCCCCAGCAGGCAGCAGTACCAGCTCACGCCCTGGTGGGGTTGGCTaGGGACTAGATACATGGGGT +
Preference number: 4 (lower is better)
Translates to: WLWALSESAPAGSSTSSRPGGVG*GLDTWG
Trigger: ACCCCATGTATCTAGTCCCCAGCCAACCCCACCAGG...GCGTGAGCTGGTACTGCTGCCTGCTGGGGCAGACTCACTGAGAGCCCAGAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000602644.5
CDS-3UTR CCA 90 bp CTCTACCTGCACCAGCTTCCGGTCCAGCTCAGCACGGTGGCTCTGGGCTCTCAGGGGACCTGGTGGGGTTaGCTGGGGACTAGATACATG +
Preference number: 4 (lower is better)
Translates to: LYLHQLPVQLSTVALGSQGTWWG*LGTRYM
Trigger: CATGTATCTAGTCCCCAGCCAACCCCACCAGGTCCC...CTGAGAGCCCAGAGCCACCGTGCTGAGCTGGACCGGAAGCTGGTGCAGGTAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000602644.5
CDS-3UTR CCA 90 bp ACCCTGTCCTTTGCAGCCATGTGGCGATCCTCAGCATGGAGCTCCTTGCCACTGGTCCACCCCCAGGCCTaGCTCCTTAGCTTCGGGACC +
Preference number: 4 (lower is better)
Translates to: TLSFAAMWRSSAWSSLPLVHPQA*LLSFGT
Trigger: GGTCCCGAAGCTAAGGAGCCAGGCCTGGGGGTGGAC...CAGTGGCAAGGAGCTCCATGCTGAGGATCGCCACATGGCTGCAAAGGACAGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000243878.9
CDS-3UTR CCA 90 bp CTTCAGACCTCTGCTCTGGGATTGGGTCCAACCCTGTCCTTTGCAGCCATGTGGATGGCAGGGTCCGGCTaGCTCTGCTTGCGGGCCTCG +
Preference number: 4 (lower is better)
Translates to: LQTSALGLGPTLSFAAMWMAGSG*LCLRAS
Trigger: CGAGGCCCGCAAGCAGAGCCAGCCGGACCCTGCCAT...CCACATGGCTGCAAAGGACAGGGTTGGACCCAATCCCAGAGCAGAGGTCTGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243878.9
ENST00000602644.5
CDS-3UTR CCA 90 bp CCTGTCTTCAGACCTCTGCTCTGGGATTGGGTCCAACCCTGTCCTTTGCAGCCATCAGGCATGCGCGTGTaGCCTGGGGGCATGGCAGGG +
Preference number: 4 (lower is better)
Translates to: PVFRPLLWDWVQPCPLQPSGMRV*PGGMAG
Trigger: CCCTGCCATGCCCCCAGGCCACACGCGCATGCCTGA...TGGCTGCAAAGGACAGGGTTGGACCCAATCCCAGAGCAGAGGTCTGAAGACAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243878.9
ENST00000602644.5
CDS-3UTR CCA 90 bp TGGGCTCTCAGTGAGTCTGCCCCAGCAGGCAGCAGTACCAGCTCACGCAGCAGCTGGCGATCCTCAGCATaGAGCTCCTTGCCACTGTCC +
Preference number: 4 (lower is better)
Translates to: WALSESAPAGSSTSSRSSWRSSA*SSLPLS
Trigger: GGACAGTGGCAAGGAGCTCCATGCTGAGGATCGCCA...GCTGCTGCGTGAGCTGGTACTGCTGCCTGCTGGGGCAGACTCACTGAGAGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602644.5
CDS-3UTR GCA 90 bp CTGCTCTGGGATTGGGTCCAACCCTGTCCTTTGCAGCCATGTGGCGATCCTCAGTTTGCCGCCAGCCGCTaGCACCCGACGGGACTTGTT +
Preference number: 4 (lower is better)
Translates to: LLWDWVQPCPLQPCGDPQFAASR*HPTGLV
Trigger: AACAAGTCCCGTCGGGTGGCAGCGGCTGGCGGCAAA...CTGAGGATCGCCACATGGCTGCAAAGGACAGGGTTGGACCCAATCCCAGAGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243878.9
CDS-3UTR GCA 90 bp GGTCCAACCCTGTCCTTTGCAGCCATGTGGCGATCCTCAGCATGGAGCTCCTTGTCACTCGAGAGGTTTTaGCGCCAGCCGCTGCCACCC +
Preference number: 4 (lower is better)
Translates to: GPTLSFAAMWRSSAWSSLSLERF*RQPLPP
Trigger: GGGTGGCAGCGGCTGGCGGCAAAACCTCTCGAGTGA...CAAGGAGCTCCATGCTGAGGATCGCCACATGGCTGCAAAGGACAGGGTTGGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243878.9
ENST00000602644.5
CDS-3UTR GCA 90 bp CTCTGCTCTGGGATTGGGTCCAACCCTGTCCTTTGCAGCCATGTGGCGATCCTCTCACTCGAGAGGTTTTaGCGCCAGCCGCTGCCACCC +
Preference number: 4 (lower is better)
Translates to: LCSGIGSNPVLCSHVAILSLERF*RQPLPP
Trigger: GGGTGGCAGCGGCTGGCGGCAAAACCTCTCGAGTGA...GAGGATCGCCACATGGCTGCAAAGGACAGGGTTGGACCCAATCCCAGAGCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243878.9
ENST00000602644.5
CDS-3UTR GCA 90 bp TCAGACCTCTGCTCTGGGATTGGGTCCAACCCTGTCCTTTGCAGCCATGTGGCGTCCTGGGCCTGCCGCTaGTGCTCTAGCACTTGTGCC +
Preference number: 4 (lower is better)
Translates to: SDLCSGIGSNPVLCSHVASWACR*CSSTCA
Trigger: GGCACAAGTGCTAGAGCAGCAGCGGCAGGCCCAGGA...CGCCACATGGCTGCAAAGGACAGGGTTGGACCCAATCCCAGAGCAGAGGTCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243878.9
CDS-3UTR GCA 90 bp AACCCTGTCCTTTGCAGCCATGTGGCGATCCTCAGCATGGAGCTCCTTGCCACTGCTGGTTCTCAGGCATaGGCGTGTGGCCTGGGGGCA +
Preference number: 4 (lower is better)
Translates to: NPVLCSHVAILSMELLATAGSQA*ACGLGA
Trigger: TGCCCCCAGGCCACACGCGCATGCCTGAGAACCAGC...AGTGGCAAGGAGCTCCATGCTGAGGATCGCCACATGGCTGCAAAGGACAGGGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243878.9
ENST00000602644.5
CDS-3UTR CCA 90 bp TGGGCTCTCAGTGAGTCTGCCCCAGCAGGCAGCAGTACCAGCTCACGCAGCAGCCCACCTTGTCGTACTTaGGTGAGCGCCACAGAGCTT +
Preference number: 4 (lower is better)
Translates to: WALSESAPAGSSTSSRSSPPCRT*VSATEL
Trigger: AAGCTCTGTGGCGCTCACCCAAGTACGACAAGGTGG...GCTGCTGCGTGAGCTGGTACTGCTGCCTGCTGGGGCAGACTCACTGAGAGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602644.5
CDS-3UTR CCA 90 bp TCCTGTCTTCAGACCTCTGCTCTGGGATTGGGTCCAACCCTGTCCTTTGCAGCCAGATACATGGGGTGGTaGGAGGCCAGGGCCGCAGCG +
Preference number: 4 (lower is better)
Translates to: SCLQTSALGLGPTLSFAARYMGW*EARAAA
Trigger: CGCTGCGGCCCTGGCCTCCCACCACCCCATGTATCT...GGCTGCAAAGGACAGGGTTGGACCCAATCCCAGAGCAGAGGTCTGAAGACAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243878.9
ENST00000602644.5
CDS-3UTR CCA 90 bp CCTTCTGCAGCCACTGGTGACTGGGAAGAGTGCTCTAGGGACACTGGCCACCCCCCTGGTGGGGTTGGCTaGGGACTAGATACATGGGGT +
Preference number: 4 (lower is better)
Translates to: PSAATGDWEECSRDTGHPPGGVG*GLDTWG
Trigger: ACCCCATGTATCTAGTCCCCAGCCAACCCCACCAGG...GGGGTGGCCAGTGTCCCTAGAGCACTCTTCCCAGTCACCAGTGGCTGCAGAAGG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000243878.9
ENST00000602644.5
CDS-3UTR CCA 90 bp TGTCTTCAGACCTCTGCTCTGGGATTGGGTCCAACCCTGTCCTTTGCAGCCATGATGGCAGGGTCCGGCTaGCTCTGCTTGCGGGCCTCG +
Preference number: 4 (lower is better)
Translates to: CLQTSALGLGPTLSFAAMMAGSG*LCLRAS
Trigger: CGAGGCCCGCAAGCAGAGCCAGCCGGACCCTGCCAT...CATGGCTGCAAAGGACAGGGTTGGACCCAATCCCAGAGCAGAGGTCTGAAGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243878.9
ENST00000602644.5
CDS-3UTR CCA 90 bp CCTTCTGCAGCCACTGGTGACTGGGAAGAGTGCTCTAGGGACACTGGCCACCCCGGCTCTGGAGCAGCTTaGTCAGTGTTTCCAGCCGCT +
Preference number: 4 (lower is better)
Translates to: PSAATGDWEECSRDTGHPGSGAA*SVFPAA
Trigger: AGCGGCTGGAAACACTGACCAAGCTGCTCCAGAGCC...GGGGTGGCCAGTGTCCCTAGAGCACTCTTCCCAGTCACCAGTGGCTGCAGAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243878.9
ENST00000602644.5
CDS-3UTR CCA 90 bp GCTAGGGTGGCCCTTCTGCAGCCACTGGTGACTGGGAAGAGTGCTCTAGGGACATCAGCACGGTGGCTCTaGGCTCTCAGTGAGTCTGCC +
Preference number: 4 (lower is better)
Translates to: ARVALLQPLVTGKSALGTSARWL*ALSESA
Trigger: GGCAGACTCACTGAGAGCCCAGAGCCACCGTGCTGA...TGTCCCTAGAGCACTCTTCCCAGTCACCAGTGGCTGCAGAAGGGCCACCCTAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243878.9
ENST00000602644.5
CDS-3UTR TCA 90 bp GTGGCCCTTCTGCAGCCACTGGTGACTGGGAAGAGTGCTCTAGGGACACTGGCCTGCGCTCCTGTTCTCTaGAGCGCTTCTGAATCTCCC +
Preference number: 4 (lower is better)
Translates to: VALLQPLVTGKSALGTLACAPVL*SASESP
Trigger: GGGAGATTCAGAAGCGCTTCAGAGAACAGGAGCGCA...GGCCAGTGTCCCTAGAGCACTCTTCCCAGTCACCAGTGGCTGCAGAAGGGCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243878.9
ENST00000602644.5
CDS-3UTR TCA 90 bp GTGGCCCTTCTGCAGCCACTGGTGACTGGGAAGAGTGCTCTAGGGACACTGGCCCTTGTCGTACTTGGGTaGGCGCCACAGAGCTTTCAG +
Preference number: 4 (lower is better)
Translates to: VALLQPLVTGKSALGTLALVVLG*APQSFQ
Trigger: CTGAAAGCTCTGTGGCGCTCACCCAAGTACGACAAG...GGCCAGTGTCCCTAGAGCACTCTTCCCAGTCACCAGTGGCTGCAGAAGGGCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243878.9
ENST00000602644.5
CDS-3UTR GCA 90 bp TGTCCCCCAAAGGGGCTCAGTCGTCCATCTTCACGAAGACTTTGGGCCGAGAAACGGTGCCCCGAGGCCTaGAGGGCTGTTTACCTCCCT +
Preference number: 4 (lower is better)
Translates to: CPPKGLSRPSSRRLWAEKRCPEA*RAVYLP
Trigger: AGGGAGGTAAACAGCCCTGCAGGCCTCGGGGCACCG...TTTCTCGGCCCAAAGTCTTCGTGAAGATGGACGACTGAGCCCCTTTGGGGGACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000602644.5
CDS-3UTR GCA 90 bp TCCAACCCTGTCCTTTGCAGCCATGTGGCGATCCTCAGCATGGAGCTCCTTGCCGAGATCCCCTCGAGTTaGAACAGCACGTCCCCGACG +
Preference number: 4 (lower is better)
Translates to: SNPVLCSHVAILSMELLAEIPSS*NSTSPT
Trigger: CGTCGGGGACGTGCTGTTGCAACTCGAGGGGATCTC...GGCAAGGAGCTCCATGCTGAGGATCGCCACATGGCTGCAAAGGACAGGGTTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243878.9
ENST00000602644.5
CDS-3UTR GCA 90 bp CCAACCCTGTCCTTTGCAGCCATGTGGCGATCCTCAGCATGGAGCTCCTTGCCAGCCGCCACAGGTCCCTaGGCTCCAACAAGCTTAGCT +
Preference number: 4 (lower is better)
Translates to: PTLSFAAMWRSSAWSSLPAATGP*APTSLA
Trigger: AGCTAAGCTTGTTGGAGCGCAGGGACCTGTGGCGGC...TGGCAAGGAGCTCCATGCTGAGGATCGCCACATGGCTGCAAAGGACAGGGTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602644.5
CDS-3UTR CCA 90 bp CCTGTCTTCAGACCTCTGCTCTGGGATTGGGTCCAACCCTGTCCTTTGCAGCCATGCGCCCGCAGGAAGTaGGCAGACTCTGTCCCAGAG +
Preference number: 4 (lower is better)
Translates to: PVFRPLLWDWVQPCPLQPCARRK*ADSVPE
Trigger: CTCTGGGACAGAGTCTGCCCACTTCCTGCGGGCGCA...TGGCTGCAAAGGACAGGGTTGGACCCAATCCCAGAGCAGAGGTCTGAAGACAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243878.9
ENST00000602644.5
CDS-3UTR CCA 90 bp TCAGACCTCTGCTCTGGGATTGGGTCCAACCCTGTCCTTTGCAGCCATGTGGCGACTAGATACATGGGGTaGTGGGAGGCCAGGGCCGCA +
Preference number: 4 (lower is better)
Translates to: SDLCSGIGSNPVLCSHVATRYMG*WEARAA
Trigger: TGCGGCCCTGGCCTCCCACCACCCCATGTATCTAGT...CGCCACATGGCTGCAAAGGACAGGGTTGGACCCAATCCCAGAGCAGAGGTCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243878.9
ENST00000602644.5
CDS-3UTR CCA 90 bp GACCTCTGCTCTGGGATTGGGTCCAACCCTGTCCTTTGCAGCCATGTGGCGATCACTAGATACATGGGGTaGTGGGAGGCCAGGGCCGCA +
Preference number: 4 (lower is better)
Translates to: DLCSGIGSNPVLCSHVAITRYMG*WEARAA
Trigger: TGCGGCCCTGGCCTCCCACCACCCCATGTATCTAGT...GATCGCCACATGGCTGCAAAGGACAGGGTTGGACCCAATCCCAGAGCAGAGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243878.9
ENST00000602644.5
CDS-3UTR CCA 90 bp ACCCTGTCCTTTGCAGCCATGTGGCGATCCTCAGCATGGAGCTCCTTGCCACTGTGGGGACTAGATACATaGGGTGGTGGGAGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: TLSFAAMWRSSAWSSLPLWGLDT*GGGRPG
Trigger: CCCTGGCCTCCCACCACCCCATGTATCTAGTCCCCA...CAGTGGCAAGGAGCTCCATGCTGAGGATCGCCACATGGCTGCAAAGGACAGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243878.9
ENST00000602644.5
CDS-3UTR CCA 90 bp CCTCTGCTCTGGGATTGGGTCCAACCCTGTCCTTTGCAGCCATGTGGCGATCCTTGGGGACTAGATACATaGGGTGGTGGGAGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: PLLWDWVQPCPLQPCGDPWGLDT*GGGRPG
Trigger: CCCTGGCCTCCCACCACCCCATGTATCTAGTCCCCA...AGGATCGCCACATGGCTGCAAAGGACAGGGTTGGACCCAATCCCAGAGCAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243878.9
ENST00000602644.5
CDS-3UTR TCA 90 bp GGGTCCAACCCTGTCCTTTGCAGCCATGTGGCGATCCTCAGCATGGAGCTCCTTGTGCATTGTGACGAATaGAGTCCACCCCCAGGCCTG +
Preference number: 4 (lower is better)
Translates to: GSNPVLCSHVAILSMELLVHCDE*SPPPGL
Trigger: CAGGCCTGGGGGTGGACTTCATTCGTCACAATGCAC...AAGGAGCTCCATGCTGAGGATCGCCACATGGCTGCAAAGGACAGGGTTGGACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000243878.9
CDS-3UTR GCA 90 bp CTTCAGACCTCTGCTCTGGGATTGGGTCCAACCCTGTCCTTTGCAGCCATGTGGATGGCCTCCTCTACCTaGACCAGCTTCCGGTCCAGC +
Preference number: 4 (lower is better)
Translates to: LQTSALGLGPTLSFAAMWMASST*TSFRSS
Trigger: GCTGGACCGGAAGCTGGTGCAGGTAGAGGAGGCCAT...CCACATGGCTGCAAAGGACAGGGTTGGACCCAATCCCAGAGCAGAGGTCTGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243878.9
ENST00000602644.5
CDS-3UTR GCA 90 bp CCTGTCTTCAGACCTCTGCTCTGGGATTGGGTCCAACCCTGTCCTTTGCAGCCAATGGCCTCCTCTACCTaGACCAGCTTCCGGTCCAGC +
Preference number: 4 (lower is better)
Translates to: PVFRPLLWDWVQPCPLQPMASST*TSFRSS
Trigger: GCTGGACCGGAAGCTGGTGCAGGTAGAGGAGGCCAT...TGGCTGCAAAGGACAGGGTTGGACCCAATCCCAGAGCAGAGGTCTGAAGACAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243878.9
ENST00000602644.5
CDS-3UTR GCA 90 bp GCCACTGTCCCCCAAAGGGGCTCAGTCGTCCATCTTCACGAAGACTTTGGGCCGTCCAACCCTGTCCTTTaGAGCCATGTGGCGATCCTC +
Preference number: 4 (lower is better)
Translates to: ATVPQRGSVVHLHEDFGPSNPVL*SHVAIL
Trigger: GAGGATCGCCACATGGCTGCAAAGGACAGGGTTGGA...CGGCCCAAAGTCTTCGTGAAGATGGACGACTGAGCCCCTTTGGGGGACAGTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602644.5
CDS-3UTR GCA 90 bp GGTCCAACCCTGTCCTTTGCAGCCATGTGGCGATCCTCAGCATGGAGCTCCTTGGGTGACTGGGAAGAGTaGTCTAGGGACACTGGCCAC +
Preference number: 4 (lower is better)
Translates to: GPTLSFAAMWRSSAWSSLGDWEE*SRDTGH
Trigger: GTGGCCAGTGTCCCTAGAGCACTCTTCCCAGTCACC...CAAGGAGCTCCATGCTGAGGATCGCCACATGGCTGCAAAGGACAGGGTTGGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243878.9
ENST00000602644.5
CDS-3UTR CCA 90 bp CTGTCTTCAGACCTCTGCTCTGGGATTGGGTCCAACCCTGTCCTTTGCAGCCATTGCGCCCGCAGGAAGTaGGCAGACTCTGTCCCAGAG +
Preference number: 4 (lower is better)
Translates to: LSSDLCSGIGSNPVLCSHCARRK*ADSVPE
Trigger: CTCTGGGACAGAGTCTGCCCACTTCCTGCGGGCGCA...ATGGCTGCAAAGGACAGGGTTGGACCCAATCCCAGAGCAGAGGTCTGAAGACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243878.9
ENST00000602644.5
CDS-3UTR CCA 90 bp TTCAGACCTCTGCTCTGGGATTGGGTCCAACCCTGTCCTTTGCAGCCATGTGGCCTTAGCTTCGGGACCTaGTGGGGTTGGCTGGGGACT +
Preference number: 4 (lower is better)
Translates to: FRPLLWDWVQPCPLQPCGLSFGT*WGWLGT
Trigger: AGTCCCCAGCCAACCCCACCAGGTCCCGAAGCTAAG...GCCACATGGCTGCAAAGGACAGGGTTGGACCCAATCCCAGAGCAGAGGTCTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243878.9
ENST00000602644.5
CDS-3UTR CCA 90 bp AGCTCCTTGCCACTGTCCCCCAAAGGGGCTCAGTCGTCCATCTTCACGAAGACTCTTAGCTTCGGGACCTaGTGGGGTTGGCTGGGGACT +
Preference number: 4 (lower is better)
Translates to: SSLPLSPKGAQSSIFTKTLSFGT*WGWLGT
Trigger: AGTCCCCAGCCAACCCCACCAGGTCCCGAAGCTAAG...AGTCTTCGTGAAGATGGACGACTGAGCCCCTTTGGGGGACAGTGGCAAGGAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000602644.5
CDS-3UTR CCA 90 bp CCTCTGCTCTGGGATTGGGTCCAACCCTGTCCTTTGCAGCCATGTGGCGATCCTCATGGCCCTTCTGCGTaGCATTGTAGTGCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: PLLWDWVQPCPLQPCGDPHGPSA*HCSAPG
Trigger: CCCAGGAGCACTACAATGCCACGCAGAAGGGCCATG...AGGATCGCCACATGGCTGCAAAGGACAGGGTTGGACCCAATCCCAGAGCAGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243878.9
CDS-3UTR CCA 90 bp CTCTGCTCTGGGATTGGGTCCAACCCTGTCCTTTGCAGCCATGTGGCGATCCTCAGTGTTTCCAGCCGCTaGTTCTCAGGCATGCGCGTG +
Preference number: 4 (lower is better)
Translates to: LCSGIGSNPVLCSHVAILSVSSR*FSGMRV
Trigger: CACGCGCATGCCTGAGAACCAGCGGCTGGAAACACT...GAGGATCGCCACATGGCTGCAAAGGACAGGGTTGGACCCAATCCCAGAGCAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243878.9
ENST00000602644.5
CDS-3UTR CCA 90 bp CCTCTGCTCTGGGATTGGGTCCAACCCTGTCCTTTGCAGCCATGTGGCGATCCTGGCTCTGGAGCAGCTTaGTCAGTGTTTCCAGCCGCT +
Preference number: 4 (lower is better)
Translates to: PLLWDWVQPCPLQPCGDPGSGAA*SVFPAA
Trigger: AGCGGCTGGAAACACTGACCAAGCTGCTCCAGAGCC...AGGATCGCCACATGGCTGCAAAGGACAGGGTTGGACCCAATCCCAGAGCAGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243878.9
ENST00000602644.5
CDS-3UTR CCA 90 bp GCTCCTGTCTTCAGACCTCTGCTCTGGGATTGGGTCCAACCCTGTCCTTTGCAGTCAGCACGGTGGCTCTaGGCTCTCAGTGAGTCTGCC +
Preference number: 4 (lower is better)
Translates to: APVFRPLLWDWVQPCPLQSARWL*ALSESA
Trigger: GGCAGACTCACTGAGAGCCCAGAGCCACCGTGCTGA...CTGCAAAGGACAGGGTTGGACCCAATCCCAGAGCAGAGGTCTGAAGACAGGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243878.9
ENST00000602644.5
CDS-3UTR CCA 90 bp CCAACCCTGTCCTTTGCAGCCATGTGGCGATCCTCAGCATGGAGCTCCTTGCCATGGCGATCCTCAGCATaGAGCTCCTTGCCACTGTCC +
Preference number: 4 (lower is better)
Translates to: PTLSFAAMWRSSAWSSLPWRSSA*SSLPLS
Trigger: GGACAGTGGCAAGGAGCTCCATGCTGAGGATCGCCA...TGGCAAGGAGCTCCATGCTGAGGATCGCCACATGGCTGCAAAGGACAGGGTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243878.9
ENST00000602644.5
CDS-3UTR TCA 90 bp GGGTCCAACCCTGTCCTTTGCAGCCATGTGGCGATCCTCAGCATGGAGCTCCTTTCTCTGAAGCGCTTCTaGATCTCCCTGATCCGCCTC +
Preference number: 4 (lower is better)
Translates to: GSNPVLCSHVAILSMELLSLKRF*ISLIRL
Trigger: GAGGCGGATCAGGGAGATTCAGAAGCGCTTCAGAGA...AAGGAGCTCCATGCTGAGGATCGCCACATGGCTGCAAAGGACAGGGTTGGACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243878.9
ENST00000602644.5
CDS-3UTR TCA 90 bp CCAACCCTGTCCTTTGCAGCCATGTGGCGATCCTCAGCATGGAGCTCCTTGCCATCTCTGAAGCGCTTCTaGATCTCCCTGATCCGCCTC +
Preference number: 4 (lower is better)
Translates to: PTLSFAAMWRSSAWSSLPSLKRF*ISLIRL
Trigger: GAGGCGGATCAGGGAGATTCAGAAGCGCTTCAGAGA...TGGCAAGGAGCTCCATGCTGAGGATCGCCACATGGCTGCAAAGGACAGGGTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243878.9
ENST00000602644.5
CDS-3UTR TCA 90 bp CTGCTCTGGGATTGGGTCCAACCCTGTCCTTTGCAGCCATGTGGCGATCCTCAGCTTGTCGTACTTGGGTaGGCGCCACAGAGCTTTCAG +
Preference number: 4 (lower is better)
Translates to: LLWDWVQPCPLQPCGDPQLVVLG*APQSFQ
Trigger: CTGAAAGCTCTGTGGCGCTCACCCAAGTACGACAAG...CTGAGGATCGCCACATGGCTGCAAAGGACAGGGTTGGACCCAATCCCAGAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243878.9
ENST00000602644.5
CDS-3UTR TCA 90 bp TTCAGACCTCTGCTCTGGGATTGGGTCCAACCCTGTCCTTTGCAGCCATGTGGCGCAGCTCGTGCATTGTaGCGAATGAAGTCCACCCCC +
Preference number: 4 (lower is better)
Translates to: FRPLLWDWVQPCPLQPCGAARAL*RMKSTP
Trigger: GGGGGTGGACTTCATTCGTCACAATGCACGAGCTGC...GCCACATGGCTGCAAAGGACAGGGTTGGACCCAATCCCAGAGCAGAGGTCTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243878.9
CDS-3UTR GCA 90 bp ACCCTGTCCTTTGCAGCCATGTGGCGATCCTCAGCATGGAGCTCCTTGCCACTGACTTGTGCCAGGACCTaGAGTGAGCAGGAATGCCTC +
Preference number: 4 (lower is better)
Translates to: TLSFAAMWRSSAWSSLPLTCART*SEQECL
Trigger: GAGGCATTCCTGCTCACTGCAGGTCCTGGCACAAGT...CAGTGGCAAGGAGCTCCATGCTGAGGATCGCCACATGGCTGCAAAGGACAGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243878.9
CDS-3UTR GCA 90 bp CCAACCCTGTCCTTTGCAGCCATGTGGCGATCCTCAGCATGGAGCTCCTTGCCATCCAACCCTGTCCTTTaGAGCCATGTGGCGATCCTC +
Preference number: 4 (lower is better)
Translates to: PTLSFAAMWRSSAWSSLPSNPVL*SHVAIL
Trigger: GAGGATCGCCACATGGCTGCAAAGGACAGGGTTGGA...TGGCAAGGAGCTCCATGCTGAGGATCGCCACATGGCTGCAAAGGACAGGGTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243878.9
ENST00000602644.5
CDS-3UTR GCA 90 bp GCTCCTGTCTTCAGACCTCTGCTCTGGGATTGGGTCCAACCCTGTCCTTTGCAGGGTGACTGGGAAGAGTaGTCTAGGGACACTGGCCAC +
Preference number: 4 (lower is better)
Translates to: APVFRPLLWDWVQPCPLQGDWEE*SRDTGH
Trigger: GTGGCCAGTGTCCCTAGAGCACTCTTCCCAGTCACC...CTGCAAAGGACAGGGTTGGACCCAATCCCAGAGCAGAGGTCTGAAGACAGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243878.9
ENST00000602644.5
CDS-3UTR CCA 90 bp CTTCAGACCTCTGCTCTGGGATTGGGTCCAACCCTGTCCTTTGCAGCCATGTGGGGGACCTGGTGGGGTTaGCTGGGGACTAGATACATG +
Preference number: 4 (lower is better)
Translates to: LQTSALGLGPTLSFAAMWGTWWG*LGTRYM
Trigger: CATGTATCTAGTCCCCAGCCAACCCCACCAGGTCCC...CCACATGGCTGCAAAGGACAGGGTTGGACCCAATCCCAGAGCAGAGGTCTGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000243878.9
ENST00000602644.5
CDS-3UTR CCA 90 bp CCTGTCTTCAGACCTCTGCTCTGGGATTGGGTCCAACCCTGTCCTTTGCAGCCAAGTGTTTCCAGCCGCTaGTTCTCAGGCATGCGCGTG +
Preference number: 4 (lower is better)
Translates to: PVFRPLLWDWVQPCPLQPSVSSR*FSGMRV
Trigger: CACGCGCATGCCTGAGAACCAGCGGCTGGAAACACT...TGGCTGCAAAGGACAGGGTTGGACCCAATCCCAGAGCAGAGGTCTGAAGACAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243878.9
ENST00000602644.5
CDS-3UTR CCA 90 bp CCTCTGCTCTGGGATTGGGTCCAACCCTGTCCTTTGCAGCCATGTGGCGATCCTAGCTGGCTCTGGCTCTaGAGCAGCTTGGTCAGTGTT +
Preference number: 4 (lower is better)
Translates to: PLLWDWVQPCPLQPCGDPSWLWL*SSLVSV
Trigger: AACACTGACCAAGCTGCTCCAGAGCCAGAGCCAGCT...AGGATCGCCACATGGCTGCAAAGGACAGGGTTGGACCCAATCCCAGAGCAGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243878.9
ENST00000602644.5
3UTR CAA 72 bp AGACCTCTGCTCTGGGATTGGGTCCAACCCTGTCCTTaGCAGCCATGTGGCGATCCTCAGCATGGAGCTCCT +
Preference number: 4 (lower is better)
Translates to: RPLLWDWVQPCP*QPCGDPQHGAP
Trigger: AGGAGCTCCATGCTGAGGATCGCCACATGGCTGCAAAGGACAGGGTTGGACCCAATCCCAGAGCAGAGGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243878.9
ENST00000602644.5
CDS-3UTR TCA 90 bp GCTCCTGTCTTCAGACCTCTGCTCTGGGATTGGGTCCAACCCTGTCCTTTGCAGGCTTCTGAATCTCCCTaGTCCGCCTCAGGTTCTCCT +
Preference number: 4 (lower is better)
Translates to: APVFRPLLWDWVQPCPLQASESP*SASGSP
Trigger: AGGAGAACCTGAGGCGGATCAGGGAGATTCAGAAGC...CTGCAAAGGACAGGGTTGGACCCAATCCCAGAGCAGAGGTCTGAAGACAGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243878.9
ENST00000602644.5
CDS-3UTR GCA 90 bp CTGTCTTCAGACCTCTGCTCTGGGATTGGGTCCAACCCTGTCCTTTGCAGCCATGCCGCCACAGGTCCCTaGGCTCCAACAAGTAATGTG +
Preference number: 4 (lower is better)
Translates to: LSSDLCSGIGSNPVLCSHAATGP*APTSNV
Trigger: CACATTACTTGTTGGAGCGCAGGGACCTGTGGCGGC...ATGGCTGCAAAGGACAGGGTTGGACCCAATCCCAGAGCAGAGGTCTGAAGACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243878.9
CDS-3UTR GCA 90 bp GGGTCCAACCCTGTCCTTTGCAGCCATGTGGCGATCCTCAGCATGGAGCTCCTTCTGTCTTCAGACCTCTaGTCTGGGATTGGGTCCAAC +
Preference number: 4 (lower is better)
Translates to: GSNPVLCSHVAILSMELLLSSDL*SGIGSN
Trigger: GTTGGACCCAATCCCAGAGCAGAGGTCTGAAGACAG...AAGGAGCTCCATGCTGAGGATCGCCACATGGCTGCAAAGGACAGGGTTGGACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243878.9
ENST00000602644.5
CDS-3UTR CCA 90 bp AGGGGCTCAGTCGTCCATCTTCACGAAGACTTTGGGCCGAGAAAAGATCTTGATACAGAGCGTCGGGTCTaGGGGGATGGGCCCCGAGAT +
Preference number: 4 (lower is better)
Translates to: RGSVVHLHEDFGPRKDLDTERRV*GDGPRD
Trigger: ATCTCGGGGCCCATCCCCCCAGACCCGACGCTCTGT...ATCAAGATCTTTTCTCGGCCCAAAGTCTTCGTGAAGATGGACGACTGAGCCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000602644.5
CDS-3UTR CCA 90 bp GCTCCTGTCTTCAGACCTCTGCTCTGGGATTGGGTCCAACCCTGTCCTTTGCAGAGCTGGCTCTGGCTCTaGAGCAGCTTGGTCAGTGTT +
Preference number: 4 (lower is better)
Translates to: APVFRPLLWDWVQPCPLQSWLWL*SSLVSV
Trigger: AACACTGACCAAGCTGCTCCAGAGCCAGAGCCAGCT...CTGCAAAGGACAGGGTTGGACCCAATCCCAGAGCAGAGGTCTGAAGACAGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243878.9
ENST00000602644.5
CDS-3UTR CCA 90 bp TTCAGACCTCTGCTCTGGGATTGGGTCCAACCCTGTCCTTTGCAGCCATGTGGCTCCTTTGCAGCCATGTaGCGATCCTCAGCATGGAGC +
Preference number: 4 (lower is better)
Translates to: FRPLLWDWVQPCPLQPCGSFAAM*RSSAWS
Trigger: GCTCCATGCTGAGGATCGCCACATGGCTGCAAAGGA...GCCACATGGCTGCAAAGGACAGGGTTGGACCCAATCCCAGAGCAGAGGTCTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243878.9
ENST00000602644.5
CDS-3UTR CCA 90 bp CTTGCCACTGTCCCCCAAAGGGGCTCAGTCGTCCATCTTCACGAAGACTTTGGGTCCTTTGCAGCCATGTaGCGATCCTCAGCATGGAGC +
Preference number: 4 (lower is better)
Translates to: LATVPQRGSVVHLHEDFGSFAAM*RSSAWS
Trigger: GCTCCATGCTGAGGATCGCCACATGGCTGCAAAGGA...CCCAAAGTCTTCGTGAAGATGGACGACTGAGCCCCTTTGGGGGACAGTGGCAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602644.5
CDS-3UTR CCA 90 bp CTGCTCTGGGATTGGGTCCAACCCTGTCCTTTGCAGCCATGTGGCGATCCTCAGTTCAGACCTCTGCTCTaGGATTGGGTCCAACCCTGT +
Preference number: 4 (lower is better)
Translates to: LLWDWVQPCPLQPCGDPQFRPLL*DWVQPC
Trigger: ACAGGGTTGGACCCAATCCCAGAGCAGAGGTCTGAA...CTGAGGATCGCCACATGGCTGCAAAGGACAGGGTTGGACCCAATCCCAGAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243878.9
ENST00000602644.5
CDS-3UTR TCA 90 bp CTGTCTTCAGACCTCTGCTCTGGGATTGGGTCCAACCCTGTCCTTTGCAGCCATGCTTCTGAATCTCCCTaGTCCGCCTCAGGTTCTCCT +
Preference number: 4 (lower is better)
Translates to: LSSDLCSGIGSNPVLCSHASESP*SASGSP
Trigger: AGGAGAACCTGAGGCGGATCAGGGAGATTCAGAAGC...ATGGCTGCAAAGGACAGGGTTGGACCCAATCCCAGAGCAGAGGTCTGAAGACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243878.9
ENST00000602644.5
CDS-3UTR TCA 90 bp AACCCTGTCCTTTGCAGCCATGTGGCGATCCTCAGCATGGAGCTCCTTGCCACTGCCGAGAAAAGATCTTaGTGGCCTCCTCTACCTGCA +
Preference number: 4 (lower is better)
Translates to: NPVLCSHVAILSMELLATAEKRS*WPPLPA
Trigger: TGCAGGTAGAGGAGGCCATCAAGATCTTTTCTCGGC...AGTGGCAAGGAGCTCCATGCTGAGGATCGCCACATGGCTGCAAAGGACAGGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243878.9
ENST00000602644.5
CDS-3UTR GCA 90 bp GCTCCTGTCTTCAGACCTCTGCTCTGGGATTGGGTCCAACCCTGTCCTTTGCAGCTGTCTTCAGACCTCTaGTCTGGGATTGGGTCCAAC +
Preference number: 4 (lower is better)
Translates to: APVFRPLLWDWVQPCPLQLSSDL*SGIGSN
Trigger: GTTGGACCCAATCCCAGAGCAGAGGTCTGAAGACAG...CTGCAAAGGACAGGGTTGGACCCAATCCCAGAGCAGAGGTCTGAAGACAGGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243878.9
ENST00000602644.5
CDS-3UTR CCA 90 bp TGTCTTCAGACCTCTGCTCTGGGATTGGGTCCAACCCTGTCCTTTGCAGCCATGCCACCTTGTCGTACTTaGGTGAGCGCCACAGAGCTT +
Preference number: 4 (lower is better)
Translates to: CLQTSALGLGPTLSFAAMPPCRT*VSATEL
Trigger: AAGCTCTGTGGCGCTCACCCAAGTACGACAAGGTGG...CATGGCTGCAAAGGACAGGGTTGGACCCAATCCCAGAGCAGAGGTCTGAAGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243878.9
ENST00000602644.5
CDS-3UTR CCA 90 bp CTGCTCTGGGATTGGGTCCAACCCTGTCCTTTGCAGCCATGTGGCGATCCTCAGCTCCAACAAGTAATGTaGCACATGGCCCTTCTGCGT +
Preference number: 4 (lower is better)
Translates to: LLWDWVQPCPLQPCGDPQLQQVM*HMALLR
Trigger: ACGCAGAAGGGCCATGTGCCACATTACTTGTTGGAG...CTGAGGATCGCCACATGGCTGCAAAGGACAGGGTTGGACCCAATCCCAGAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243878.9
CDS-3UTR TCA 90 bp TGTCCCCCAAAGGGGCTCAGTCGTCCATCTTCACGAAGACTTTGGGCCGAGAAAGCCGAGAAAAGATCTTaGTGGCCTCCTCTACCTGCA +
Preference number: 4 (lower is better)
Translates to: CPPKGLSRPSSRRLWAEKAEKRS*WPPLPA
Trigger: TGCAGGTAGAGGAGGCCATCAAGATCTTTTCTCGGC...TTTCTCGGCCCAAAGTCTTCGTGAAGATGGACGACTGAGCCCCTTTGGGGGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000602644.5
CDS-3UTR CCA 90 bp CTTCAGACCTCTGCTCTGGGATTGGGTCCAACCCTGTCCTTTGCAGCCATGTGGAGGTTCTCCTTCTCATaGTCCTTAGGGTCCTTCCTC +
Preference number: 4 (lower is better)
Translates to: LQTSALGLGPTLSFAAMWRFSFS*SLGSFL
Trigger: GAGGAAGGACCCTAAGGACCATGAGAAGGAGAACCT...CCACATGGCTGCAAAGGACAGGGTTGGACCCAATCCCAGAGCAGAGGTCTGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243878.9
ENST00000602644.5
CDS-3UTR CCA 90 bp CTGTCTTCAGACCTCTGCTCTGGGATTGGGTCCAACCCTGTCCTTTGCAGCCATTTCAGACCTCTGCTCTaGGATTGGGTCCAACCCTGT +
Preference number: 4 (lower is better)
Translates to: LSSDLCSGIGSNPVLCSHFRPLL*DWVQPC
Trigger: ACAGGGTTGGACCCAATCCCAGAGCAGAGGTCTGAA...ATGGCTGCAAAGGACAGGGTTGGACCCAATCCCAGAGCAGAGGTCTGAAGACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243878.9
ENST00000602644.5
3UTR CAA 72 bp CCCAAAGGGGCTCAGTCGTCCATCTTCACGAAGACTTaGGGCCGAGAAAAGATCTTGATGGCCTCCTCTACC +
Preference number: 4 (lower is better)
Translates to: PKGAQSSIFTKT*GREKILMASST
Trigger: GGTAGAGGAGGCCATCAAGATCTTTTCTCGGCCCAAAGTCTTCGTGAAGATGGACGACTGAGCCCCTTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602644.5
CDS-3UTR GCA 90 bp AACCCTGTCCTTTGCAGCCATGTGGCGATCCTCAGCATGGAGCTCCTTGCCACTTCTCTTGGCAGCTCGTaGATTGTGACGAATGAAGTC +
Preference number: 4 (lower is better)
Translates to: NPVLCSHVAILSMELLATSLGSS*IVTNEV
Trigger: GACTTCATTCGTCACAATGCACGAGCTGCCAAGAGA...AGTGGCAAGGAGCTCCATGCTGAGGATCGCCACATGGCTGCAAAGGACAGGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000243878.9
CDS GCA 90 bp CGCCGCGCTGGCCGCGCTCCAGGATCTCTCCGGCACCGGGACCGATaGAGGGGCCACGGGGAGCGGTGGTGTCCAGGGCCCGGTCGGAAG +
Preference number: 5 (lower is better)
Translates to: RRAGRAPGSLRHRDR*RGHGERWCPGPGRK
Trigger: CTTCCGACCGGGCCCTGGACACCACCGCTCCCCGTGGCCCCTGCATCGGTCCCGGTGCCGGAGAGATCCTGGAGCGCGGCCAGCGCGGCG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000243878.9
ENST00000602415.2
ENST00000602531.1
ENST00000602644.5
CDS GCA 90 bp GGCATGCGCGTGTGGCCTGGGGGCATGGCAGGGTCCGGCTGGCTCTaGTTGCGGGCCTCGGCCTCCCGCCGCCACAGGTCCCTGCGCTCC +
Preference number: 5 (lower is better)
Translates to: GMRVWPGGMAGSGWL*LRASASRRHRSLRS
Trigger: GGAGCGCAGGGACCTGTGGCGGCGGGAGGCCGAGGCCCGCAAGCAGAGCCAGCCGGACCCTGCCATGCCCCCAGGCCACACGCGCATGCC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000243878.9
ENST00000602415.2
ENST00000602642.1
ENST00000602644.5
ENST00000602942.5
CDS GCA 90 bp CGGCCGAGGGTGGGCTCCGCGGTCGCCGGTTTCTCTTCCCAGCTCTaGCCTCGCTTGCTGGCCGGTCTCCGGGGTCAGCGCGGGGCCACC +
Preference number: 5 (lower is better)
Translates to: RPRVGSAVAGFSSQL*PRLLAGLRGQRGAT
Trigger: GGTGGCCCCGCGCTGACCCCGGAGACCGGCCAGCAAGCGAGGGCAGAGCTGGGAAGAGAAACCGGCGACCGCGGAGCCCACCCTCGGCCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602531.1
CDS GCA 90 bp TGGGCTCCGCGGTCGCCGGTTTCTCTTCCCAGCTCTGCCCTCGCTTaGTGGCCGGTCTCCGGGGTCAGCGCGGGGCCACCATCCAGCCCC +
Preference number: 5 (lower is better)
Translates to: WAPRSPVSLPSSALA*WPVSGVSAGPPSSP
Trigger: GGGGCTGGATGGTGGCCCCGCGCTGACCCCGGAGACCGGCCAGCAAGCGAGGGCAGAGCTGGGAAGAGAAACCGGCGACCGCGGAGCCCA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602531.1
CDS CCA 90 bp AGCCGAGGTCGGCCGCCTGTAGTTGTCAGGACAGAGCGTCGGGTCTaGGGGGATGGGCCCCGAGATGCGGGACGGGCCCTCGCACATGCC +
Preference number: 5 (lower is better)
Translates to: SRGRPPVVVRTERRV*GDGPRDAGRALAHA
Trigger: GGCATGTGCGAGGGCCCGTCCCGCATCTCGGGGCCCATCCCCCCAGACCCGACGCTCTGTCCTGACAACTACAGGCGGCCGACCTCGGCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243878.9
ENST00000602644.5
CDS CCA 90 bp AGGGAGATCCCCTCGAGTTGCAACAGCACGTCCCCGACGCCGCGCTaGCCGCGCTCCAGGATCTCTCCGGCACCGGGACCGATGCAGGGG +
Preference number: 5 (lower is better)
Translates to: REIPSSCNSTSPTPR*PRSRISPAPGPMQG
Trigger: CCCCTGCATCGGTCCCGGTGCCGGAGAGATCCTGGAGCGCGGCCAGCGCGGCGTCGGGGACGTGCTGTTGCAACTCGAGGGGATCTCCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000243878.9
ENST00000602415.2
ENST00000602531.1
ENST00000602644.5
CDS CCA 90 bp GGATCTCTCCGGCACCGGGACCGATGCAGGGGCCACGGGGAGCGGTaGTGTCCAGGGCCCGGTCGGAAGTCAGCAAGTCCAGCTTCAGCG +
Preference number: 5 (lower is better)
Translates to: GSLRHRDRCRGHGER*CPGPGRKSASPASA
Trigger: CGCTGAAGCTGGACTTGCTGACTTCCGACCGGGCCCTGGACACCACCGCTCCCCGTGGCCCCTGCATCGGTCCCGGTGCCGGAGAGATCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000243878.9
ENST00000602415.2
ENST00000602531.1
ENST00000602644.5
CDS CCA 90 bp GGTCAGTGTTTCCAGCCGCTGGTTCTCAGGCATGCGCGTGTGGCCTaGGGGCATGGCAGGGTCCGGCTGGCTCTGCTTGCGGGCCTCGGC +
Preference number: 5 (lower is better)
Translates to: GQCFQPLVLRHARVA*GHGRVRLALLAGLG
Trigger: GCCGAGGCCCGCAAGCAGAGCCAGCCGGACCCTGCCATGCCCCCAGGCCACACGCGCATGCCTGAGAACCAGCGGCTGGAAACACTGACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000243878.9
ENST00000602415.2
ENST00000602642.1
ENST00000602644.5
ENST00000602942.5
CDS CCA 90 bp GGTGGTGGGAGGCCAGGGCCGCAGCGGGAGTGCGCCCGCAGGAAGTaGGCAGACTCTGTCCCAGAGGCAGGGCCAGGCTCTCTTGAGAGA +
Preference number: 5 (lower is better)
Translates to: GGGRPGPQRECARRK*ADSVPEAGPGSLER
Trigger: TCTCTCAAGAGAGCCTGGCCCTGCCTCTGGGACAGAGTCTGCCCACTTCCTGCGGGCGCACTCCCGCTGCGGCCCTGGCCTCCCACCACC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602415.2
CDS TCA 90 bp CTGGAGCTGGGCCTTGACCCGGGACTCCACCTTGTCGTACTTGGGTaGGCGCCACAGAGCTTTCAGGGGCCTGGGCTGGCCCTGCTCCCG +
Preference number: 5 (lower is better)
Translates to: LELGLDPGLHLVVLG*APQSFQGPGLALLP
Trigger: CGGGAGCAGGGCCAGCCCAGGCCCCTGAAAGCTCTGTGGCGCTCACCCAAGTACGACAAGGTGGAGTCCCGGGTCAAGGCCCAGCTCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000243878.9
ENST00000602409.2
ENST00000602531.1
ENST00000602644.5
CDS CCA 90 bp AGCTTGGTCAGTGTTTCCAGCCGCTGGTTCTCAGGCATGCGCGTGTaGCCTGGGGGCATGGCAGGGTCCGGCTGGCTCTGCTTGCGGGCC +
Preference number: 5 (lower is better)
Translates to: SLVSVSSRWFSGMRV*PGGMAGSGWLCLRA
Trigger: GGCCCGCAAGCAGAGCCAGCCGGACCCTGCCATGCCCCCAGGCCACACGCGCATGCCTGAGAACCAGCGGCTGGAAACACTGACCAAGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000243878.9
ENST00000602415.2
ENST00000602642.1
ENST00000602644.5
ENST00000602942.5
CDS CCA 90 bp CCCTGCGCTCCAACAAGCTTAGCTTCGGGACCTGGTGGGGTTGGCTaGGGACTAGATACATGGGGTGGTGGGAGGCCAGGGCCGCAGCGG +
Preference number: 5 (lower is better)
Translates to: PCAPTSLASGPGGVG*GLDTWGGGRPGPQR
Trigger: CCGCTGCGGCCCTGGCCTCCCACCACCCCATGTATCTAGTCCCCAGCCAACCCCACCAGGTCCCGAAGCTAAGCTTGTTGGAGCGCAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602644.5
CDS-3UTR CAA 90 bp CCCTGTCCTTTGCAGCCATGTGGCGATCCTCAGCATGGAGCTCCTTGCCACTGTTCCGGCTGGCTCTGCTaGCGGGCCTCGGCCTCCCGC +
Preference number: 5 (lower is better)
Translates to: PCPLQPCGDPQHGAPCHCSGWLC*RASASR
Trigger: GCGGGAGGCCGAGGCCCGCAAGCAGAGCCAGCCGGA...ACAGTGGCAAGGAGCTCCATGCTGAGGATCGCCACATGGCTGCAAAGGACAGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243878.9
ENST00000602644.5
CDS CCA 90 bp AGCTGGCTCTGGCTCTGGAGCAGCTTGGTCAGTGTTTCCAGCCGCTaGTTCTCAGGCATGCGCGTGTGGCCTGGGGGCATGGCAGGGTCC +
Preference number: 5 (lower is better)
Translates to: SWLWLWSSLVSVSSR*FSGMRVWPGGMAGS
Trigger: GGACCCTGCCATGCCCCCAGGCCACACGCGCATGCCTGAGAACCAGCGGCTGGAAACACTGACCAAGCTGCTCCAGAGCCAGAGCCAGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000243878.9
ENST00000602415.2
ENST00000602642.1
ENST00000602644.5
ENST00000602942.5
CDS CCA 90 bp GCCTCGGCCTCCCGCCGCCACAGGTCCCTGCGCTCCAACAAGCTGTaGGTACACAGGCTCAGAGTTGATGACCCGAGGGCAGAGGTTGGT +
Preference number: 5 (lower is better)
Translates to: ASASRRHRSLRSNKL*VHRLRVDDPRAEVG
Trigger: ACCAACCTCTGCCCTCGGGTCATCAACTCTGAGCCTGTGTACCCACAGCTTGTTGGAGCGCAGGGACCTGTGGCGGCGGGAGGCCGAGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602642.1
CDS-3UTR CAA 90 bp GCTCCTGTCTTCAGACCTCTGCTCTGGGATTGGGTCCAACCCTGTCCTTTGCAGTCCGGCTGGCTCTGCTaGCGGGCCTCGGCCTCCCGC +
Preference number: 5 (lower is better)
Translates to: APVFRPLLWDWVQPCPLQSGWLC*RASASR
Trigger: GCGGGAGGCCGAGGCCCGCAAGCAGAGCCAGCCGGA...CTGCAAAGGACAGGGTTGGACCCAATCCCAGAGCAGAGGTCTGAAGACAGGAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243878.9
ENST00000602644.5
CDS TCA 90 bp AGGGACAGCTCACGGAGGAGCCCGGCAGCGCTCAGACCTCCGAGGTaGCCGTCAGGCTGTTTAACCTTCAAACACAGGGCCGCAGCGCTC +
Preference number: 5 (lower is better)
Translates to: RDSSRRSPAALRPPR*PSGCLTFKHRAAAL
Trigger: GAGCGCTGCGGCCCTGTGTTTGAAGGTTAAACAGCCTGACGGTCACCTCGGAGGTCTGAGCGCTGCCGGGCTCCTCCGTGAGCTGTCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602531.1
CDS-3UTR CAA 90 bp GGTCCAACCCTGTCCTTTGCAGCCATGTGGCGATCCTCAGCATGGAGCTCCTTGCTCACTCGAGAGGTTTaGCCGCCAGCCGCTGCCACC +
Preference number: 5 (lower is better)
Translates to: GPTLSFAAMWRSSAWSSLLTREV*PPAAAT
Trigger: GGTGGCAGCGGCTGGCGGCAAAACCTCTCGAGTGAG...CAAGGAGCTCCATGCTGAGGATCGCCACATGGCTGCAAAGGACAGGGTTGGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243878.9
ENST00000602644.5
CDS-3UTR CAA 90 bp GGGTCCAACCCTGTCCTTTGCAGCCATGTGGCGATCCTCAGCATGGAGCTCCTTCTCACTCGAGAGGTTTaGCCGCCAGCCGCTGCCACC +
Preference number: 5 (lower is better)
Translates to: GSNPVLCSHVAILSMELLLTREV*PPAAAT
Trigger: GGTGGCAGCGGCTGGCGGCAAAACCTCTCGAGTGAG...AAGGAGCTCCATGCTGAGGATCGCCACATGGCTGCAAAGGACAGGGTTGGACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243878.9
ENST00000602644.5
CDS-3UTR CAA 90 bp GCTAGGGTGGCCCTTCTGCAGCCACTGGTGACTGGGAAGAGTGCTCTAGGGACAGGAGATCCCCTCGAGTaGCAACAGCACGTCCCCGAC +
Preference number: 5 (lower is better)
Translates to: ARVALLQPLVTGKSALGTGDPLE*QQHVPD
Trigger: GTCGGGGACGTGCTGTTGCAACTCGAGGGGATCTCC...TGTCCCTAGAGCACTCTTCCCAGTCACCAGTGGCTGCAGAAGGGCCACCCTAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243878.9
ENST00000602644.5
CDS-3UTR CAA 90 bp CCTCTGCTCTGGGATTGGGTCCAACCCTGTCCTTTGCAGCCATGTGGCGATCCTACCCGGGACTCCACCTaGTCGTACTTGGGTGAGCGC +
Preference number: 5 (lower is better)
Translates to: PLLWDWVQPCPLQPCGDPTRDST*SYLGER
Trigger: GCGCTCACCCAAGTACGACAAGGTGGAGTCCCGGGT...AGGATCGCCACATGGCTGCAAAGGACAGGGTTGGACCCAATCCCAGAGCAGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243878.9
ENST00000602644.5
CDS CCA 90 bp GGTCCCTGCGCTCCAACAAGTAATGTGGCACATGGCCCTTCTGCGTaGCATTGTAGTGCTCCTGGGCCTGCCGCTGCTGCTCTAGCACTT +
Preference number: 5 (lower is better)
Translates to: GPCAPTSNVAHGPSA*HCSAPGPAAAALAL
Trigger: AAGTGCTAGAGCAGCAGCGGCAGGCCCAGGAGCACTACAATGCCACGCAGAAGGGCCATGTGCCACATTACTTGTTGGAGCGCAGGGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243878.9
ENST00000602415.2
ENST00000602942.5
CDS-3UTR CAA 90 bp GCTCCTGTCTTCAGACCTCTGCTCTGGGATTGGGTCCAACCCTGTCCTTTGCAGACCCGGGACTCCACCTaGTCGTACTTGGGTGAGCGC +
Preference number: 5 (lower is better)
Translates to: APVFRPLLWDWVQPCPLQTRDST*SYLGER
Trigger: GCGCTCACCCAAGTACGACAAGGTGGAGTCCCGGGT...CTGCAAAGGACAGGGTTGGACCCAATCCCAGAGCAGAGGTCTGAAGACAGGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243878.9
ENST00000602644.5
CDS TCA 90 bp GATAATACTTCTGGCTCCCTGAAGCAGGTACCTGGAGCTGGGCCTTaGCCCGGGACTCCACCTTGTCGTACTTGGGTGAGCGCCACAGAG +
Preference number: 5 (lower is better)
Translates to: DNTSGSLKQVPGAGP*PGTPPCRTWVSATE
Trigger: CTCTGTGGCGCTCACCCAAGTACGACAAGGTGGAGTCCCGGGTCAAGGCCCAGCTCCAGGTACCTGCTTCAGGGAGCCAGAAGTATTATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602531.1
CDS GCA 90 bp GGGCTCAAGCTGCAAGACCCTGGCCATCTTGGCCCTTCTGACCTTTaGATCCATGTCCCTCGGGCCCTCTTCCCTCTTCAAGGGACACTT +
Preference number: 5 (lower is better)
Translates to: GLKLQDPGHLGPSDL*IHVPRALFPLQGTL
Trigger: AAGTGTCCCTTGAAGAGGGAAGAGGGCCCGAGGGACATGGATGCAAAGGTCAGAAGGGCCAAGATGGCCAGGGTCTTGCAGCTTGAGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602942.5
CDS CCA 90 bp TGTCGGGCAGTGAGACCTACTAATGTGGCACATGGCCCTTCTGCGTaGCATTGTAGTGCTCCTGGGCCTGCCGCTGCTGCTCTAGCACTT +
Preference number: 5 (lower is better)
Translates to: CRAVRPTNVAHGPSA*HCSAPGPAAAALAL
Trigger: AAGTGCTAGAGCAGCAGCGGCAGGCCCAGGAGCACTACAATGCCACGCAGAAGGGCCATGTGCCACATTAGTAGGTCTCACTGCCCGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602642.1
CDS-3UTR CAA 90 bp TTTGGGCCGAGAAAAGATCTTGATGGCCTCCTCTACCTGCACCAGCTTCCGGTCGGAGATCCCCTCGAGTaGCAACAGCACGTCCCCGAC +
Preference number: 5 (lower is better)
Translates to: FGPRKDLDGLLYLHQLPVGDPLE*QQHVPD
Trigger: GTCGGGGACGTGCTGTTGCAACTCGAGGGGATCTCC...GACCGGAAGCTGGTGCAGGTAGAGGAGGCCATCAAGATCTTTTCTCGGCCCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000602644.5
CDS-3UTR CAA 90 bp CTCTGCTCTGGGATTGGGTCCAACCCTGTCCTTTGCAGCCATGTGGCGATCCTCTCCACCTTGTCGTACTaGGGTGAGCGCCACAGAGCT +
Preference number: 5 (lower is better)
Translates to: LCSGIGSNPVLCSHVAILSTLSY*GERHRA
Trigger: AGCTCTGTGGCGCTCACCCAAGTACGACAAGGTGGA...GAGGATCGCCACATGGCTGCAAAGGACAGGGTTGGACCCAATCCCAGAGCAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243878.9
ENST00000602644.5
CDS-3UTR CAA 90 bp CCTGTCTTCAGACCTCTGCTCTGGGATTGGGTCCAACCCTGTCCTTTGCAGCCATCAGCATGGAGCTCCTaGCCACTGTCCCCCAAAGGG +
Preference number: 5 (lower is better)
Translates to: PVFRPLLWDWVQPCPLQPSAWSS*PLSPKG
Trigger: CCCTTTGGGGGACAGTGGCAAGGAGCTCCATGCTGA...TGGCTGCAAAGGACAGGGTTGGACCCAATCCCAGAGCAGAGGTCTGAAGACAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243878.9
ENST00000602644.5
CDS-3UTR CAA 90 bp CTGTCTTCAGACCTCTGCTCTGGGATTGGGTCCAACCCTGTCCTTTGCAGCCATTCAGCATGGAGCTCCTaGCCACTGTCCCCCAAAGGG +
Preference number: 5 (lower is better)
Translates to: LSSDLCSGIGSNPVLCSHSAWSS*PLSPKG
Trigger: CCCTTTGGGGGACAGTGGCAAGGAGCTCCATGCTGA...ATGGCTGCAAAGGACAGGGTTGGACCCAATCCCAGAGCAGAGGTCTGAAGACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000243878.9
ENST00000602644.5
CDS-3UTR CAA 90 bp TTCAGACCTCTGCTCTGGGATTGGGTCCAACCCTGTCCTTTGCAGCCATGTGGCGGCCGAGAAAAGATCTaGATGGCCTCCTCTACCTGC +
Preference number: 5 (lower is better)
Translates to: FRPLLWDWVQPCPLQPCGGREKI*MASSTC
Trigger: GCAGGTAGAGGAGGCCATCAAGATCTTTTCTCGGCC...GCCACATGGCTGCAAAGGACAGGGTTGGACCCAATCCCAGAGCAGAGGTCTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243878.9
ENST00000602644.5
CDS-3UTR CAA 90 bp TGTCTTCAGACCTCTGCTCTGGGATTGGGTCCAACCCTGTCCTTTGCAGCCATGGGCCGAGAAAAGATCTaGATGGCCTCCTCTACCTGC +
Preference number: 5 (lower is better)
Translates to: CLQTSALGLGPTLSFAAMGREKI*MASSTC
Trigger: GCAGGTAGAGGAGGCCATCAAGATCTTTTCTCGGCC...CATGGCTGCAAAGGACAGGGTTGGACCCAATCCCAGAGCAGAGGTCTGAAGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243878.9
ENST00000602644.5
CDS-3UTR CAA 90 bp ACCCTGTCCTTTGCAGCCATGTGGCGATCCTCAGCATGGAGCTCCTTGCCACTGATCTTCACGAAGACTTaGGGCCGAGAAAAGATCTTG +
Preference number: 5 (lower is better)
Translates to: TLSFAAMWRSSAWSSLPLIFTKT*GREKIL
Trigger: CAAGATCTTTTCTCGGCCCAAAGTCTTCGTGAAGAT...CAGTGGCAAGGAGCTCCATGCTGAGGATCGCCACATGGCTGCAAAGGACAGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243878.9
ENST00000602644.5
CDS-3UTR CAA 90 bp GGTCCAACCCTGTCCTTTGCAGCCATGTGGCGATCCTCAGCATGGAGCTCCTTGATCTTCACGAAGACTTaGGGCCGAGAAAAGATCTTG +
Preference number: 5 (lower is better)
Translates to: GPTLSFAAMWRSSAWSSLIFTKT*GREKIL
Trigger: CAAGATCTTTTCTCGGCCCAAAGTCTTCGTGAAGAT...CAAGGAGCTCCATGCTGAGGATCGCCACATGGCTGCAAAGGACAGGGTTGGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243878.9
ENST00000602644.5
CDS GCA 72 bp GGATGGGCCCCGAGATGCGGGACGGGCCCTCGCACATaGCGCCGGCGCCGCCCAGCAACGGTGCCCCGAGGC +
Preference number: 6 (lower is better)
Translates to: GWAPRCGTGPRT*RRRRPATVPRG
Trigger: GCCTCGGGGCACCGTTGCTGGGCGGCGCCGGCGGCATGTGCGAGGGCCCGTCCCGCATCTCGGGGCCCATCC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243878.9
ENST00000602644.5
CDS GCA 72 bp CTGGGCCCCGGCCTCGCTCGCCACCTCCGCGACCTCTaGTCCCAGCCCACTTCTCGGTCCCGCTCGCGGCCT +
Preference number: 6 (lower is better)
Translates to: LGPGLARHLRDL*SQPTSRSRSRP
Trigger: AGGCCGCGAGCGGGACCGAGAAGTGGGCTGGGAGCAGAGGTCGCGGAGGTGGCGAGCGAGGCCGGGGCCCAG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243878.9
ENST00000602644.5
CDS GCA 72 bp GGCCGCGCTCCAGGATCTCTCCGGCACCGGGACCGATaGAGGGGCCACGGGGAGCGGTGGTGTCCAGGGCCC +
Preference number: 6 (lower is better)
Translates to: GRAPGSLRHRDR*RGHGERWCPGP
Trigger: GGGCCCTGGACACCACCGCTCCCCGTGGCCCCTGCATCGGTCCCGGTGCCGGAGAGATCCTGGAGCGCGGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000243878.9
ENST00000602415.2
ENST00000602531.1
ENST00000602644.5
CDS GCA 72 bp GTGTGGCCTGGGGGCATGGCAGGGTCCGGCTGGCTCTaGTTGCGGGCCTCGGCCTCCCGCCGCCACAGGTCC +
Preference number: 6 (lower is better)
Translates to: VWPGGMAGSGWL*LRASASRRHRS
Trigger: GGACCTGTGGCGGCGGGAGGCCGAGGCCCGCAAGCAGAGCCAGCCGGACCCTGCCATGCCCCCAGGCCACAC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000243878.9
ENST00000602415.2
ENST00000602642.1
ENST00000602644.5
ENST00000602942.5
CDS GCA 72 bp GCCCGCCCCAAGCAGCTGTCGAGGACGCACTCAGCCTaGGCAGCCATGGCCTCGGCAGGGGCGGAGAGGCGG +
Preference number: 6 (lower is better)
Translates to: ARPKQLSRTHSA*AAMASAGAERR
Trigger: CCGCCTCTCCGCCCCTGCCGAGGCCATGGCTGCGCAGGCTGAGTGCGTCCTCGACAGCTGCTTGGGGCGGGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602531.1
CDS CCA 72 bp CCCTCGAGTTGCAACAGCACGTCCCCGACGCCGCGCTaGCCGCGCTCCAGGATCTCTCCGGCACCGGGACCG +
Preference number: 6 (lower is better)
Translates to: PSSCNSTSPTPR*PRSRISPAPGP
Trigger: CGGTCCCGGTGCCGGAGAGATCCTGGAGCGCGGCCAGCGCGGCGTCGGGGACGTGCTGTTGCAACTCGAGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000243878.9
ENST00000602415.2
ENST00000602531.1
ENST00000602644.5
CDS CAA 90 bp GGCCTCTCCCCCGCGGCACTCGGGCAGGGGCTCACTCGAGAGGTTTaGCCGCCAGCCGCTGCCACCCGACGGGACTTGTTGTTGCCGGGC +
Preference number: 6 (lower is better)
Translates to: GLSPAALGQGLTREV*PPAAATRRDLLLPG
Trigger: GCCCGGCAACAACAAGTCCCGTCGGGTGGCAGCGGCTGGCGGCAAAACCTCTCGAGTGAGCCCCTGCCCGAGTGCCGCGGGGGAGAGGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000243878.9
CDS GCA 72 bp CGGTCGCCGGTTTCTCTTCCCAGCTCTGCCCTCGCTTaGTGGCCGGTCTCCGGGGTCAGCGCGGGGCCACCA +
Preference number: 6 (lower is better)
Translates to: RSPVSLPSSALA*WPVSGVSAGPP
Trigger: TGGTGGCCCCGCGCTGACCCCGGAGACCGGCCAGCAAGCGAGGGCAGAGCTGGGAAGAGAAACCGGCGACCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602531.1
CDS GCA 72 bp GTGGGCTCCGCGGTCGCCGGTTTCTCTTCCCAGCTCTaGCCTCGCTTGCTGGCCGGTCTCCGGGGTCAGCGC +
Preference number: 6 (lower is better)
Translates to: VGSAVAGFSSQL*PRLLAGLRGQR
Trigger: GCGCTGACCCCGGAGACCGGCCAGCAAGCGAGGGCAGAGCTGGGAAGAGAAACCGGCGACCGCGGAGCCCAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602531.1
CDS CCA 72 bp CGGCCGCCTGTAGTTGTCAGGACAGAGCGTCGGGTCTaGGGGGATGGGCCCCGAGATGCGGGACGGGCCCTC +
Preference number: 6 (lower is better)
Translates to: RPPVVVRTERRV*GDGPRDAGRAL
Trigger: GAGGGCCCGTCCCGCATCTCGGGGCCCATCCCCCCAGACCCGACGCTCTGTCCTGACAACTACAGGCGGCCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243878.9
ENST00000602644.5
CDS CCA 72 bp CGGCACCGGGACCGATGCAGGGGCCACGGGGAGCGGTaGTGTCCAGGGCCCGGTCGGAAGTCAGCAAGTCCA +
Preference number: 6 (lower is better)
Translates to: RHRDRCRGHGER*CPGPGRKSASP
Trigger: TGGACTTGCTGACTTCCGACCGGGCCCTGGACACCACCGCTCCCCGTGGCCCCTGCATCGGTCCCGGTGCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000243878.9
ENST00000602415.2
ENST00000602531.1
ENST00000602644.5
CDS GCA 72 bp GCTTGCGGGCCTCGGCCTCCCGCCGCCACAGGTCCCTaGGCTCCAACAAGCTTAGCTTCGGGACCTGGTGGG +
Preference number: 6 (lower is better)
Translates to: ACGPRPPAATGP*APTSLASGPGG
Trigger: CCCACCAGGTCCCGAAGCTAAGCTTGTTGGAGCGCAGGGACCTGTGGCGGCGGGAGGCCGAGGCCCGCAAGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602644.5
CDS CCA 72 bp TCGCCGGTTTCTCTTCCCAGCTCTGCCCTCGCTTGCTaGCCGGTCTCCGGGGTCAGCGCGGGGCCACCATCC +
Preference number: 6 (lower is better)
Translates to: SPVSLPSSALAC*PVSGVSAGPPS
Trigger: GGATGGTGGCCCCGCGCTGACCCCGGAGACCGGCCAGCAAGCGAGGGCAGAGCTGGGAAGAGAAACCGGCGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602531.1
CDS CAA 72 bp CCCGCGGCACTCGGGCAGGGGCTCACTCGAGAGGTTTaGCCGCCAGCCGCTGCCACCCGACGGGACTTGTTG +
Preference number: 6 (lower is better)
Translates to: PAALGQGLTREV*PPAAATRRDLL
Trigger: CAACAAGTCCCGTCGGGTGGCAGCGGCTGGCGGCAAAACCTCTCGAGTGAGCCCCTGCCCGAGTGCCGCGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000243878.9
CDS GCA 72 bp CCGCGGCACTCGGGCAGGGGCTCACTCGAGAGGTTTTaGCGCCAGCCGCTGCCACCCGACGGGACTTGTTGT +
Preference number: 6 (lower is better)
Translates to: PRHSGRGSLERF*RQPLPPDGTCC
Trigger: ACAACAAGTCCCGTCGGGTGGCAGCGGCTGGCGGCAAAACCTCTCGAGTGAGCCCCTGCCCGAGTGCCGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000243878.9
CDS GCA 72 bp GCTTGCGGGCCTCGGCCTCCCGCCGCCACAGGTCCCTaGGCTCCAACAAGCTGTGGGTACACAGGCTCAGAG +
Preference number: 6 (lower is better)
Translates to: ACGPRPPAATGP*APTSCGYTGSE
Trigger: CTCTGAGCCTGTGTACCCACAGCTTGTTGGAGCGCAGGGACCTGTGGCGGCGGGAGGCCGAGGCCCGCAAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602642.1
CDS CCA 72 bp TTCCAGCCGCTGGTTCTCAGGCATGCGCGTGTGGCCTaGGGGCATGGCAGGGTCCGGCTGGCTCTGCTTGCG +
Preference number: 6 (lower is better)
Translates to: FQPLVLRHARVA*GHGRVRLALLA
Trigger: CGCAAGCAGAGCCAGCCGGACCCTGCCATGCCCCCAGGCCACACGCGCATGCCTGAGAACCAGCGGCTGGAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000243878.9
ENST00000602415.2
ENST00000602642.1
ENST00000602644.5
ENST00000602942.5
CDS TCA 72 bp TCAAACACAGGGCCGCAGCGCTCTGAGAGGTGGAACTaGGCGCCCCGACCCGCTAACTGCCAGGCTGGGCCC +
Preference number: 6 (lower is better)
Translates to: SNTGPQRSERWN*APRPANCQAGP
Trigger: GGGCCCAGCCTGGCAGTTAGCGGGTCGGGGCGCTCAGTTCCACCTCTCAGAGCGCTGCGGCCCTGTGTTTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602531.1
CDS CCA 72 bp AGTGTTTCCAGCCGCTGGTTCTCAGGCATGCGCGTGTaGCCTGGGGGCATGGCAGGGTCCGGCTGGCTCTGC +
Preference number: 6 (lower is better)
Translates to: SVSSRWFSGMRV*PGGMAGSGWLC
Trigger: GCAGAGCCAGCCGGACCCTGCCATGCCCCCAGGCCACACGCGCATGCCTGAGAACCAGCGGCTGGAAACACT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000243878.9
ENST00000602415.2
ENST00000602642.1
ENST00000602644.5
ENST00000602942.5
CDS CAA 90 bp GGTACCTGGAGCTGGGCCTTGACCCGGGACTCCACCTTGTCGTACTaGGGTGAGCGCCACAGAGCTTTCAGGGGCCTGGGCTGGCCCTGC +
Preference number: 6 (lower is better)
Translates to: GTWSWALTRDSTLSY*GERHRAFRGLGWPC
Trigger: GCAGGGCCAGCCCAGGCCCCTGAAAGCTCTGTGGCGCTCACCCAAGTACGACAAGGTGGAGTCCCGGGTCAAGGCCCAGCTCCAGGTACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602531.1
CDS TCA 72 bp GGCCTTGACCCGGGACTCCACCTTGTCGTACTTGGGTaGGCGCCACAGAGCTTTCAGGGGCCTGGGCTGGCC +
Preference number: 6 (lower is better)
Translates to: GLDPGLHLVVLG*APQSFQGPGLA
Trigger: GGCCAGCCCAGGCCCCTGAAAGCTCTGTGGCGCTCACCCAAGTACGACAAGGTGGAGTCCCGGGTCAAGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000243878.9
ENST00000602409.2
ENST00000602531.1
ENST00000602644.5
CDS GCA 72 bp GCTTGCGGGCCTCGGCCTCCCGCCGCCACAGGTCCCTaGGCTCCAACAAGTAATGTGGCACATGGCCCTTCT +
Preference number: 6 (lower is better)
Translates to: ACGPRPPAATGP*APTSNVAHGPS
Trigger: AGAAGGGCCATGTGCCACATTACTTGTTGGAGCGCAGGGACCTGTGGCGGCGGGAGGCCGAGGCCCGCAAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243878.9
ENST00000602415.2
ENST00000602942.5
CDS CCA 72 bp CCTGGCTCCTTAGCTTCGGGACCTGGTGGGGTTGGCTaGGGACTAGATACATGGGGTGGTGGGAGGCCAGGG +
Preference number: 6 (lower is better)
Translates to: PGSLASGPGGVG*GLDTWGGGRPG
Trigger: CCCTGGCCTCCCACCACCCCATGTATCTAGTCCCCAGCCAACCCCACCAGGTCCCGAAGCTAAGGAGCCAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000243878.9
ENST00000602415.2
ENST00000602942.5
CDS CCA 72 bp GCAAAGCGTCCTGGGGCTTGTAGTTTCGGCCGAGGGTaGGCTCCGCGGTCGCCGGTTTCTCTTCCCAGCTCT +
Preference number: 6 (lower is better)
Translates to: AKRPGACSFGRG*APRSPVSLPSS
Trigger: AGAGCTGGGAAGAGAAACCGGCGACCGCGGAGCCCACCCTCGGCCGAAACTACAAGCCCCAGGACGCTTTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602531.1
CDS CAA 72 bp AGCTGGGCCTTGACCCGGGACTCCACCTTGTCGTACTaGGGTGAGCGCCACAGAGCTTTCAGGGGCCTGGGC +
Preference number: 6 (lower is better)
Translates to: SWALTRDSTLSY*GERHRAFRGLG
Trigger: GCCCAGGCCCCTGAAAGCTCTGTGGCGCTCACCCAAGTACGACAAGGTGGAGTCCCGGGTCAAGGCCCAGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000243878.9
ENST00000602409.2
ENST00000602531.1
ENST00000602644.5
CDS CAA 90 bp CCTGAAGCAGGTACCTGGAGCTGGGCCTTGACCCGGGACTCCACCTaGTCGTACTTGGGTGAGCGCCACAGAGCTTTCAGGGGCCTGGGC +
Preference number: 6 (lower is better)
Translates to: PEAGTWSWALTRDST*SYLGERHRAFRGLG
Trigger: GCCCAGGCCCCTGAAAGCTCTGTGGCGCTCACCCAAGTACGACAAGGTGGAGTCCCGGGTCAAGGCCCAGCTCCAGGTACCTGCTTCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602531.1
CDS CCA 72 bp TGGCTCTGGAGCAGCTTGGTCAGTGTTTCCAGCCGCTaGTTCTCAGGCATGCGCGTGTGGCCTGGGGGCATG +
Preference number: 6 (lower is better)
Translates to: WLWSSLVSVSSR*FSGMRVWPGGM
Trigger: CATGCCCCCAGGCCACACGCGCATGCCTGAGAACCAGCGGCTGGAAACACTGACCAAGCTGCTCCAGAGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000243878.9
ENST00000602415.2
ENST00000602642.1
ENST00000602644.5
ENST00000602942.5
CDS TCA 72 bp TCACGGAGGAGCCCGGCAGCGCTCAGACCTCCGAGGTaGCCGTCAGGCTGTTTAACCTTCAAACACAGGGCC +
Preference number: 6 (lower is better)
Translates to: SRRSPAALRPPR*PSGCLTFKHRA
Trigger: GGCCCTGTGTTTGAAGGTTAAACAGCCTGACGGTCACCTCGGAGGTCTGAGCGCTGCCGGGCTCCTCCGTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602531.1
CDS CCA 72 bp CCAACAAGCTTAGCTTCGGGACCTGGTGGGGTTGGCTaGGGACTAGATACATGGGGTGGTGGGAGGCCAGGG +
Preference number: 6 (lower is better)
Translates to: PTSLASGPGGVG*GLDTWGGGRPG
Trigger: CCCTGGCCTCCCACCACCCCATGTATCTAGTCCCCAGCCAACCCCACCAGGTCCCGAAGCTAAGCTTGTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602644.5
CDS CAA 72 bp GGTACCTGGAGCTGGGCCTTGACCCGGGACTCCACCTaGTCGTACTTGGGTGAGCGCCACAGAGCTTTCAGG +
Preference number: 6 (lower is better)
Translates to: GTWSWALTRDST*SYLGERHRAFR
Trigger: CCTGAAAGCTCTGTGGCGCTCACCCAAGTACGACAAGGTGGAGTCCCGGGTCAAGGCCCAGCTCCAGGTACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602531.1
CDS TCA 72 bp GCTCAAGCTGCAAGACCCTGGCCATCTTGGCCCTTCTaGCCTTTGCATCCATGTCCCTCGGGCCCTCTTCCC +
Preference number: 6 (lower is better)
Translates to: AQAARPWPSWPF*PLHPCPSGPLP
Trigger: GGGAAGAGGGCCCGAGGGACATGGATGCAAAGGTCAGAAGGGCCAAGATGGCCAGGGTCTTGCAGCTTGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602942.5
CDS CAA 90 bp ACAGGTCCCTGCGCTCCAACAAGCTGTGGGTACACAGGCTCAGAGTaGATGACCCGAGGGCAGAGGTTGGTTCCCACCCTCCACAGGTGT +
Preference number: 6 (lower is better)
Translates to: TGPCAPTSCGYTGSE*MTRGQRLVPTLHRC
Trigger: ACACCTGTGGAGGGTGGGAACCAACCTCTGCCCTCGGGTCATCAACTCTGAGCCTGTGTACCCACAGCTTGTTGGAGCGCAGGGACCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602642.1
CDS CCA 72 bp GCTCCAACAAGTAATGTGGCACATGGCCCTTCTGCGTaGCATTGTAGTGCTCCTGGGCCTGCCGCTGCTGCT +
Preference number: 6 (lower is better)
Translates to: APTSNVAHGPSA*HCSAPGPAAAA
Trigger: AGCAGCAGCGGCAGGCCCAGGAGCACTACAATGCCACGCAGAAGGGCCATGTGCCACATTACTTGTTGGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000243878.9
ENST00000602415.2
ENST00000602942.5
CDS CCA 72 bp GTGAGACCTACTAATGTGGCACATGGCCCTTCTGCGTaGCATTGTAGTGCTCCTGGGCCTGCCGCTGCTGCT +
Preference number: 6 (lower is better)
Translates to: VRPTNVAHGPSA*HCSAPGPAAAA
Trigger: AGCAGCAGCGGCAGGCCCAGGAGCACTACAATGCCACGCAGAAGGGCCATGTGCCACATTAGTAGGTCTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602642.1
CDS CAA 72 bp TGCGCTCCAACAAGCTGTGGGTACACAGGCTCAGAGTaGATGACCCGAGGGCAGAGGTTGGTTCCCACCCTC +
Preference number: 6 (lower is better)
Translates to: CAPTSCGYTGSE*MTRGQRLVPTL
Trigger: GAGGGTGGGAACCAACCTCTGCCCTCGGGTCATCAACTCTGAGCCTGTGTACCCACAGCTTGTTGGAGCGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602642.1
CDS TCA 72 bp TGCTCCCGGCTGCGCTCCTGTTCTCTGAAGCGCTTCTaGATCTCCCTGATCCGCCTCAGGTTCTCCTTCTCA +
Preference number: 6 (lower is better)
Translates to: CSRLRSCSLKRF*ISLIRLRFSFS
Trigger: TGAGAAGGAGAACCTGAGGCGGATCAGGGAGATTCAGAAGCGCTTCAGAGAACAGGAGCGCAGCCGGGAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000243878.9
ENST00000602409.2
ENST00000602531.1
ENST00000602644.5
CDS CCA 72 bp CTCCTGAGATCCAGGCCTGAATTTCCATCTGCTTCCTaGACACACTCCCACCCCCTGGGAACCCCACAGATG +
Preference number: 6 (lower is better)
Translates to: LLRSRPEFPSAS*THSHPLGTPQM
Trigger: CATCTGTGGGGTTCCCAGGGGGTGGGAGTGTGTCCAGGAAGCAGATGGAAATTCAGGCCTGGATCTCAGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602942.5
CDS CAA 72 bp ATGTCCCTCGGGCCCTCTTCCCTCTTCAAGGGACACTaGTCCTCATCAGCACACAAATGTGTGAGTATGTCA +
Preference number: 6 (lower is better)
Translates to: MSLGPSSLFKGH*SSSAHKCVSMS
Trigger: TGACATACTCACACATTTGTGTGCTGATGAGGACAAGTGTCCCTTGAAGAGGGAAGAGGGCCCGAGGGACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602942.5