Pregenerated sensors for ENHO (Homo sapiens)
Ensembl gene IDs: ENSG00000168913Ensembl transcript IDs: ENST00000399775.3
Found 43 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | TCCAGCAAACACTGGGAGGACCAGGGGAGGGGCCCAGCCTGGACACCCTCCTATAAGCAGGCGGACTCTTaGGTTCTGGACCCCAGGCTG | + |
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Preference number: 2 (lower is better) Translates to: SSKHWEDQGRGPAWTPSYKQADS*VLDPRL Trigger: CAGCCTGGGGTCCAGAACTCAAGAGTCCGCCTGCTT...ATAGGAGGGTGTCCAGGCTGGGCCCCTCCCCTGGTCCTCCCAGTGTTTGCTGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000399775.3 |
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| 3UTR-3UTR CCA 90 bp | CAGCCTAGAGGGCCTAGAGGTGCTCAGCCTAGGGAAAGAGTGGACCCGGCCCCTCGGACTCTTGAGTTCTaGACCCCAGGCTGGCTGAAC | + |
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Preference number: 2 (lower is better) Translates to: QPRGPRGAQPRERVDPAPRTLEF*TPGWLN Trigger: GTTCAGCCAGCCTGGGGTCCAGAACTCAAGAGTCCG...AGGGGCCGGGTCCACTCTTTCCCTAGGCTGAGCACCTCTAGGCCCTCTAGGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000399775.3 |
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| 3UTR-3UTR CCA 90 bp | TATTATCCAGCAAACACTGGGAGGACCAGGGGAGGGGCCCAGCCTGGACACCCTAAGCTGGCTAGACTCTaGGCCGCTGGGTCCAGCTCC | + |
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Preference number: 2 (lower is better) Translates to: YYPANTGRTRGGAQPGHPKLARL*AAGSSS Trigger: GGAGCTGGACCCAGCGGCCCAGAGTCTAGCCAGCTT...AGGGTGTCCAGGCTGGGCCCCTCCCCTGGTCCTCCCAGTGTTTGCTGGATAATA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000399775.3 |
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| 3UTR-3UTR CCA 90 bp | TTATCCAGCAAACACTGGGAGGACCAGGGGAGGGGCCCAGCCTGGACACCCTCCCTATTGGAGCCAAGCTaGCTAGACTCTGGGCCGCTG | + |
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Preference number: 2 (lower is better) Translates to: LSSKHWEDQGRGPAWTPSLLEPS*LDSGPL Trigger: CAGCGGCCCAGAGTCTAGCCAGCTTGGCTCCAATAG...GGAGGGTGTCCAGGCTGGGCCCCTCCCCTGGTCCTCCCAGTGTTTGCTGGATAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000399775.3 |
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| 3UTR-3UTR CCA 90 bp | TTATCCAGCAAACACTGGGAGGACCAGGGGAGGGGCCCAGCCTGGACACCCTCCCCTTGGCCCTTGGGATaGAGCATAGTCCAGATGGCC | + |
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Preference number: 2 (lower is better) Translates to: LSSKHWEDQGRGPAWTPSPWPLG*SIVQMA Trigger: GGCCATCTGGACTATGCTCCATCCCAAGGGCCAAGG...GGAGGGTGTCCAGGCTGGGCCCCTCCCCTGGTCCTCCCAGTGTTTGCTGGATAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000399775.3 |
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| 3UTR-3UTR CCA 90 bp | CCAGCAAACACTGGGAGGACCAGGGGAGGGGCCCAGCCTGGACACCCTCCTATTAGGCTGGCTGAACTCTaGGATCCTAATTCCAGGCTC | + |
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Preference number: 2 (lower is better) Translates to: PANTGRTRGGAQPGHPPIRLAEL*DPNSRL Trigger: GAGCCTGGAATTAGGATCCCAGAGTTCAGCCAGCCT...AATAGGAGGGTGTCCAGGCTGGGCCCCTCCCCTGGTCCTCCCAGTGTTTGCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000399775.3 |
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| 3UTR-3UTR CCA 90 bp | TATTATCCAGCAAACACTGGGAGGACCAGGGGAGGGGCCCAGCCTGGACACCCTTTCTGGACCCCAGGCTaGCTGAACTCTGGGATCCTA | + |
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Preference number: 2 (lower is better) Translates to: YYPANTGRTRGGAQPGHPFWTPG*LNSGIL Trigger: TAGGATCCCAGAGTTCAGCCAGCCTGGGGTCCAGAA...AGGGTGTCCAGGCTGGGCCCCTCCCCTGGTCCTCCCAGTGTTTGCTGGATAATA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000399775.3 |
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| 3UTR CCA 72 bp | CAGCCTAGGGAAAGAGTGGACCCGGCCCCTGACCCTTaGCCCTTGGGATGGAGCATAGTCCAGATGGCCCTG | + |
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Preference number: 3 (lower is better) Translates to: QPRERVDPAPDP*PLGWSIVQMAL Trigger: CAGGGCCATCTGGACTATGCTCCATCCCAAGGGCCAAGGGTCAGGGGCCGGGTCCACTCTTTCCCTAGGCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000399775.3 |
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| 3UTR CCA 72 bp | CTAGAGGGCCTAGAGGTGCTCAGCCTAGGGAAAGAGTaGACCCGGCCCCTGACCCTTGGCCCTTGGGATGGA | + |
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Preference number: 3 (lower is better) Translates to: LEGLEVLSLGKE*TRPLTLGPWDG Trigger: TCCATCCCAAGGGCCAAGGGTCAGGGGCCGGGTCCACTCTTTCCCTAGGCTGAGCACCTCTAGGCCCTCTAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000399775.3 |
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| 3UTR-3UTR CAA 90 bp | ACACTGGGAGGACCAGGGGAGGGGCCCAGCCTGGACACCCTCCTATTATTGCCACAAGCAGGCGGACTCTaGAGTTCTGGACCCCAGGCT | + |
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Preference number: 3 (lower is better) Translates to: TLGGPGEGPSLDTLLLLPQAGGL*SSGPQA Trigger: AGCCTGGGGTCCAGAACTCAAGAGTCCGCCTGCTTG...TGGCAATAATAGGAGGGTGTCCAGGCTGGGCCCCTCCCCTGGTCCTCCCAGTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000399775.3 |
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| 3UTR CCA 72 bp | CCAAGCAGGCGGACTCTTGAGTTCTGGACCCCAGGCTaGCTGAACTCTGGGATCCTAATTCCAGGCTCTAGG | + |
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Preference number: 3 (lower is better) Translates to: PSRRTLEFWTPG*LNSGILIPGSR Trigger: CCTAGAGCCTGGAATTAGGATCCCAGAGTTCAGCCAGCCTGGGGTCCAGAACTCAAGAGTCCGCCTGCTTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000399775.3 |
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| CDS-3UTR GCA 90 bp | GGGCCGCTGGGTCCAGCTCCAAGCAGGCGGACTCTTGAGTTCTGGACCCCAGGCTCCGGGGCAGCGGGATaGTCGGCGCCGACTAAGGCT | + |
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Preference number: 4 (lower is better) Translates to: GPLGPAPSRRTLEFWTPGSGAAG*SAPTKA Trigger: AGCCTTAGTCGGCGCCGAGCATCCCGCTGCCCCGGA...GCCTGGGGTCCAGAACTCAAGAGTCCGCCTGCTTGGAGCTGGACCCAGCGGCCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000399775.3 |
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| CDS-3UTR TCA 90 bp | TTATCCAGCAAACACTGGGAGGACCAGGGGAGGGGCCCAGCCTGGACACCCTCCGTCCTGAGCCTGAGTTaGGCCTGGTGCGCGCCCGCG | + |
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Preference number: 4 (lower is better) Translates to: LSSKHWEDQGRGPAWTPSVLSLS*AWCAPA Trigger: CGCGGGCGCGCACCAGGCTCAACTCAGGCTCAGGAC...GGAGGGTGTCCAGGCTGGGCCCCTCCCCTGGTCCTCCCAGTGTTTGCTGGATAA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000399775.3 |
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| CDS-3UTR CCA 90 bp | CTAGAGGGCCTAGAGGTGCTCAGCCTAGGGAAAGAGTGGACCCGGCCCCTGACCGCGATGAGGGCCCCCTaGGAGATGGCTGCCCCCATG | + |
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Preference number: 4 (lower is better) Translates to: LEGLEVLSLGKEWTRPLTAMRAP*EMAAPM Trigger: CATGGGGGCAGCCATCTCCCAGGGGGCCCTCATCGC...GGTCAGGGGCCGGGTCCACTCTTTCCCTAGGCTGAGCACCTCTAGGCCCTCTAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000399775.3 |
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| CDS-3UTR TCA 90 bp | AGAGGGCCTAGAGGTGCTCAGCCTAGGGAAAGAGTGGACCCGGCCCCTGACCCTTGCAGACGATGGCGATaGGGGCCCCCTGGGAGATGG | + |
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Preference number: 4 (lower is better) Translates to: RGPRGAQPRERVDPAPDPCRRWR*GPPGRW Trigger: CCATCTCCCAGGGGGCCCTCATCGCCATCGTCTGCA...AGGGTCAGGGGCCGGGTCCACTCTTTCCCTAGGCTGAGCACCTCTAGGCCCTCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000399775.3 |
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| CDS-3UTR CCA 90 bp | CCAGCAAACACTGGGAGGACCAGGGGAGGGGCCCAGCCTGGACACCCTCCTATTGGGCTTCTGGGGTGGTaGGGCCTTCTCAGGACAGGG | + |
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Preference number: 4 (lower is better) Translates to: PANTGRTRGGAQPGHPPIGLLGW*GLLRTG Trigger: CCCTGTCCTGAGAAGGCCCCACCACCCCAGAAGCCC...AATAGGAGGGTGTCCAGGCTGGGCCCCTCCCCTGGTCCTCCCAGTGTTTGCTGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000399775.3 |
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| CDS-3UTR TCA 90 bp | CAGCCTAGAGGGCCTAGAGGTGCTCAGCCTAGGGAAAGAGTGGACCCGGCCCCTAGGCCCAGCAGAGGATaGCCCAGAGCAGCAGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: QPRGPRGAQPRERVDPAPRPSRG*PRAAAA Trigger: TGCTGCTGCTGCTCTGGGTCATCCTCTGCTGGGCCT...AGGGGCCGGGTCCACTCTTTCCCTAGGCTGAGCACCTCTAGGCCCTCTAGGCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000399775.3 |
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| CDS-3UTR CCA 90 bp | CCAGCAAACACTGGGAGGACCAGGGGAGGGGCCCAGCCTGGACACCCTCCTATTGGCAGGACTCTGGTATaGCCGGCCTTCAGAGGAGGC | + |
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Preference number: 4 (lower is better) Translates to: PANTGRTRGGAQPGHPPIGRTLV*PAFRGG Trigger: GCCTCCTCTGAAGGCCGGCCATACCAGAGTCCTGCC...AATAGGAGGGTGTCCAGGCTGGGCCCCTCCCCTGGTCCTCCCAGTGTTTGCTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000399775.3 |
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| CDS-3UTR CCA 90 bp | CTAGAGGGCCTAGAGGTGCTCAGCCTAGGGAAAGAGTGGACCCGGCCCCTGACCAAGCTGGCTAGACTCTaGGCCGCTGGGTCCAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: LEGLEVLSLGKEWTRPLTKLARL*AAGSSS Trigger: GGAGCTGGACCCAGCGGCCCAGAGTCTAGCCAGCTT...GGTCAGGGGCCGGGTCCACTCTTTCCCTAGGCTGAGCACCTCTAGGCCCTCTAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000399775.3 |
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| CDS-3UTR CCA 90 bp | AGAGGGCCTAGAGGTGCTCAGCCTAGGGAAAGAGTGGACCCGGCCCCTGACCCTTCATGGCTGGGCTTCTaGGGTGGTGGGGCCTTCTCA | + |
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Preference number: 4 (lower is better) Translates to: RGPRGAQPRERVDPAPDPSWLGF*GGGAFS Trigger: TGAGAAGGCCCCACCACCCCAGAAGCCCAGCCATGA...AGGGTCAGGGGCCGGGTCCACTCTTTCCCTAGGCTGAGCACCTCTAGGCCCTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000399775.3 |
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| CDS-3UTR GCA 90 bp | AGAGGGCCTAGAGGTGCTCAGCCTAGGGAAAGAGTGGACCCGGCCCCTGACCCTGGAGGCTGTGCTGTCTaGACGCTCAGTGATTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: RGPRGAQPRERVDPAPDPGGCAV*TLSDSW Trigger: CCAGGAATCACTGAGCGTGCAGACAGCACAGCCTCC...AGGGTCAGGGGCCGGGTCCACTCTTTCCCTAGGCTGAGCACCTCTAGGCCCTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000399775.3 |
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| CDS-3UTR GCA 90 bp | CAGCCTAGAGGGCCTAGAGGTGCTCAGCCTAGGGAAAGAGTGGACCCGGCCCCTCCATGGGTTCCAGTTTaGTTCCCCAGCCTAGAGGGC | + |
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Preference number: 4 (lower is better) Translates to: QPRGPRGAQPRERVDPAPPWVPV*FPSLEG Trigger: GCCCTCTAGGCTGGGGAAGCAAACTGGAACCCATGG...AGGGGCCGGGTCCACTCTTTCCCTAGGCTGAGCACCTCTAGGCCCTCTAGGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000399775.3 |
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| CDS-3UTR CCA 90 bp | ATAAGCCCCCACCCCAGGCCCATCTCCTTAGGGCCACTGAGCTCCTATTGGAGCGCCGAGGCAGGACTCTaGTATGGCCGGCCTTCAGAG | + |
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Preference number: 4 (lower is better) Translates to: ISPHPRPISLGPLSSYWSAEAGL*YGRPSE Trigger: CTCTGAAGGCCGGCCATACCAGAGTCCTGCCTCGGC...GCTCCAATAGGAGCTCAGTGGCCCTAAGGAGATGGGCCTGGGGTGGGGGCTTAT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000399775.3 |
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| CDS-3UTR CCA 90 bp | ATAAGCCCCCACCCCAGGCCCATCTCCTTAGGGCCACTGAGCTCCTATTGGAGCGCTGGGCTTCTGGGGTaGTGGGGCCTTCTCAGGACA | + |
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Preference number: 4 (lower is better) Translates to: ISPHPRPISLGPLSSYWSAGLLG*WGLLRT Trigger: TGTCCTGAGAAGGCCCCACCACCCCAGAAGCCCAGC...GCTCCAATAGGAGCTCAGTGGCCCTAAGGAGATGGGCCTGGGGTGGGGGCTTAT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000399775.3 |
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| CDS-3UTR CCA 90 bp | GGGCCGCTGGGTCCAGCTCCAAGCAGGCGGACTCTTGAGTTCTGGACCCCAGGCAGGCTGGCTGAACTCTaGGATCCTAATTCCAGGCTC | + |
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Preference number: 4 (lower is better) Translates to: GPLGPAPSRRTLEFWTPGRLAEL*DPNSRL Trigger: GAGCCTGGAATTAGGATCCCAGAGTTCAGCCAGCCT...GCCTGGGGTCCAGAACTCAAGAGTCCGCCTGCTTGGAGCTGGACCCAGCGGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000399775.3 |
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| CDS-3UTR CCA 90 bp | AGAGGGCCTAGAGGTGCTCAGCCTAGGGAAAGAGTGGACCCGGCCCCTGACCCTCCTTGGCCCTTGGGATaGAGCATAGTCCAGATGGCC | + |
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Preference number: 4 (lower is better) Translates to: RGPRGAQPRERVDPAPDPPWPLG*SIVQMA Trigger: GGCCATCTGGACTATGCTCCATCCCAAGGGCCAAGG...AGGGTCAGGGGCCGGGTCCACTCTTTCCCTAGGCTGAGCACCTCTAGGCCCTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000399775.3 |
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| CDS-3UTR CCA 90 bp | AGAGGGCCTAGAGGTGCTCAGCCTAGGGAAAGAGTGGACCCGGCCCCTGACCCTTTATCCAGCAAACACTaGGAGGACCAGGGGAGGGGC | + |
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Preference number: 4 (lower is better) Translates to: RGPRGAQPRERVDPAPDPLSSKH*EDQGRG Trigger: GCCCCTCCCCTGGTCCTCCCAGTGTTTGCTGGATAA...AGGGTCAGGGGCCGGGTCCACTCTTTCCCTAGGCTGAGCACCTCTAGGCCCTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000399775.3 |
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| CDS-3UTR GCA 90 bp | TTATCCAGCAAACACTGGGAGGACCAGGGGAGGGGCCCAGCCTGGACACCCTCCCACAGACAGTGGAGCTaGCTCAATGGTGAGGCCCAT | + |
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Preference number: 4 (lower is better) Translates to: LSSKHWEDQGRGPAWTPSHRQWS*LNGEAH Trigger: ATGGGCCTCACCATTGAGGCAGCTCCACTGTCTGTG...GGAGGGTGTCCAGGCTGGGCCCCTCCCCTGGTCCTCCCAGTGTTTGCTGGATAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000399775.3 |
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| CDS-3UTR CCA 90 bp | ACACTGGGAGGACCAGGGGAGGGGCCCAGCCTGGACACCCTCCTATTATTGCCACTATTGGAGCCAAGCTaGCTAGACTCTGGGCCGCTG | + |
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Preference number: 4 (lower is better) Translates to: TLGGPGEGPSLDTLLLLPLLEPS*LDSGPL Trigger: CAGCGGCCCAGAGTCTAGCCAGCTTGGCTCCAATAG...TGGCAATAATAGGAGGGTGTCCAGGCTGGGCCCCTCCCCTGGTCCTCCCAGTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000399775.3 |
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| CDS-3UTR CCA 90 bp | ATAAGCCCCCACCCCAGGCCCATCTCCTTAGGGCCACTGAGCTCCTATTGGAGCAGCCTAGGGAAAGAGTaGACCCGGCCCCTGACCCTT | + |
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Preference number: 4 (lower is better) Translates to: ISPHPRPISLGPLSSYWSSLGKE*TRPLTL Trigger: AAGGGTCAGGGGCCGGGTCCACTCTTTCCCTAGGCT...GCTCCAATAGGAGCTCAGTGGCCCTAAGGAGATGGGCCTGGGGTGGGGGCTTAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000399775.3 |
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| CDS-3UTR CCA 90 bp | ATAAGCCCCCACCCCAGGCCCATCTCCTTAGGGCCACTGAGCTCCTATTGGAGCGGGAGGGGCCCAGCCTaGACACCCTCCTATTATTGC | + |
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Preference number: 4 (lower is better) Translates to: ISPHPRPISLGPLSSYWSGRGPA*TPSYYC Trigger: GCAATAATAGGAGGGTGTCCAGGCTGGGCCCCTCCC...GCTCCAATAGGAGCTCAGTGGCCCTAAGGAGATGGGCCTGGGGTGGGGGCTTAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000399775.3 |
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| CDS-3UTR TCA 90 bp | GGTCCAGCTCCAAGCAGGCGGACTCTTGAGTTCTGGACCCCAGGCTGGCTGAACTGTCTGCACGCTCAGTaGTTCCTGGGCAGTGGAGAT | + |
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Preference number: 4 (lower is better) Translates to: GPAPSRRTLEFWTPGWLNCLHAQ*FLGSGD Trigger: ATCTCCACTGCCCAGGAATCACTGAGCGTGCAGACA...GTTCAGCCAGCCTGGGGTCCAGAACTCAAGAGTCCGCCTGCTTGGAGCTGGACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000399775.3 |
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| CDS-3UTR GCA 90 bp | CAGCCTAGAGGGCCTAGAGGTGCTCAGCCTAGGGAAAGAGTGGACCCGGCCCCTGTGGAGATGTCTACCTaGAGTCCTGAGCCTGAGTTG | + |
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Preference number: 4 (lower is better) Translates to: QPRGPRGAQPRERVDPAPVEMST*SPEPEL Trigger: CAACTCAGGCTCAGGACTGCAGGTAGACATCTCCAC...AGGGGCCGGGTCCACTCTTTCCCTAGGCTGAGCACCTCTAGGCCCTCTAGGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000399775.3 |
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| CDS-3UTR CCA 90 bp | ATAAGCCCCCACCCCAGGCCCATCTCCTTAGGGCCACTGAGCTCCTATTGGAGCTTCTGGACCCCAGGCTaGCTGAACTCTGGGATCCTA | + |
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Preference number: 4 (lower is better) Translates to: ISPHPRPISLGPLSSYWSFWTPG*LNSGIL Trigger: TAGGATCCCAGAGTTCAGCCAGCCTGGGGTCCAGAA...GCTCCAATAGGAGCTCAGTGGCCCTAAGGAGATGGGCCTGGGGTGGGGGCTTAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000399775.3 |
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| CDS-3UTR CCA 90 bp | AAACACTGGGAGGACCAGGGGAGGGGCCCAGCCTGGACACCCTCCTATTATTGCGTGATTCCTGGGCAGTaGAGATGTCTACCTGCAGTC | + |
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Preference number: 4 (lower is better) Translates to: KHWEDQGRGPAWTPSYYCVIPGQ*RCLPAV Trigger: GACTGCAGGTAGACATCTCCACTGCCCAGGAATCAC...GCAATAATAGGAGGGTGTCCAGGCTGGGCCCCTCCCCTGGTCCTCCCAGTGTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000399775.3 |
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| CDS-3UTR GCA 90 bp | CAGCCTAGAGGGCCTAGAGGTGCTCAGCCTAGGGAAAGAGTGGACCCGGCCCCTACACCCTCCTATTATTaGCATGGGTTCCAGTTTGCT | + |
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Preference number: 4 (lower is better) Translates to: QPRGPRGAQPRERVDPAPTPSYY*HGFQFA Trigger: AGCAAACTGGAACCCATGGCAATAATAGGAGGGTGT...AGGGGCCGGGTCCACTCTTTCCCTAGGCTGAGCACCTCTAGGCCCTCTAGGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000399775.3 |
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| CDS-3UTR CAA 90 bp | GGTCCAGCTCCAAGCAGGCGGACTCTTGAGTTCTGGACCCCAGGCTGGCTGAACAGTCCTGAGCCTGAGTaGAGCCTGGTGCGCGCCCGC | + |
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Preference number: 5 (lower is better) Translates to: GPAPSRRTLEFWTPGWLNSPEPE*SLVRAR Trigger: GCGGGCGCGCACCAGGCTCAACTCAGGCTCAGGACT...GTTCAGCCAGCCTGGGGTCCAGAACTCAAGAGTCCGCCTGCTTGGAGCTGGACC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000399775.3 |
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| CDS-3UTR CAA 90 bp | GGGCCGCTGGGTCCAGCTCCAAGCAGGCGGACTCTTGAGTTCTGGACCCCAGGCGCCATGGGTTCCAGTTaGCTTCCCCAGCCTAGAGGG | + |
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Preference number: 5 (lower is better) Translates to: GPLGPAPSRRTLEFWTPGAMGSS*LPQPRG Trigger: CCCTCTAGGCTGGGGAAGCAAACTGGAACCCATGGC...GCCTGGGGTCCAGAACTCAAGAGTCCGCCTGCTTGGAGCTGGACCCAGCGGCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000399775.3 |
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| CDS-3UTR CAA 90 bp | TCCAGCAAACACTGGGAGGACCAGGGGAGGGGCCCAGCCTGGACACCCTCCTATGGGCCAGGGCTGGAGTaGGGACTGGATTCAGAGAGA | + |
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Preference number: 5 (lower is better) Translates to: SSKHWEDQGRGPAWTPSYGPGLE*GLDSER Trigger: TCTCTCTGAATCCAGTCCCAACTCCAGCCCTGGCCC...ATAGGAGGGTGTCCAGGCTGGGCCCCTCCCCTGGTCCTCCCAGTGTTTGCTGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000399775.3 |
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| CDS-3UTR CAA 90 bp | CCAGCAAACACTGGGAGGACCAGGGGAGGGGCCCAGCCTGGACACCCTCCTATTCAAGCAGGCGGACTCTaGAGTTCTGGACCCCAGGCT | + |
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Preference number: 5 (lower is better) Translates to: PANTGRTRGGAQPGHPPIQAGGL*SSGPQA Trigger: AGCCTGGGGTCCAGAACTCAAGAGTCCGCCTGCTTG...AATAGGAGGGTGTCCAGGCTGGGCCCCTCCCCTGGTCCTCCCAGTGTTTGCTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000399775.3 |
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| CDS-3UTR CAA 90 bp | CCAGCAAACACTGGGAGGACCAGGGGAGGGGCCCAGCCTGGACACCCTCCTATTCCTGACCCTTGGCCCTaGGGATGGAGCATAGTCCAG | + |
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Preference number: 5 (lower is better) Translates to: PANTGRTRGGAQPGHPPIPDPWP*GWSIVQ Trigger: CTGGACTATGCTCCATCCCAAGGGCCAAGGGTCAGG...AATAGGAGGGTGTCCAGGCTGGGCCCCTCCCCTGGTCCTCCCAGTGTTTGCTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000399775.3 |
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| CDS-3UTR CAA 90 bp | CAGCAAACACTGGGAGGACCAGGGGAGGGGCCCAGCCTGGACACCCTCCTATTAAAGCCCACGAGACCGTaGCAGACGATGGCGATGAGG | + |
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Preference number: 5 (lower is better) Translates to: QQTLGGPGEGPSLDTLLLKPTRP*QTMAMR Trigger: CCTCATCGCCATCGTCTGCAACGGTCTCGTGGGCTT...TAATAGGAGGGTGTCCAGGCTGGGCCCCTCCCCTGGTCCTCCCAGTGTTTGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000399775.3 |
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| CDS-3UTR CAA 90 bp | TATTATCCAGCAAACACTGGGAGGACCAGGGGAGGGGCCCAGCCTGGACACCCTGACACCCTCCTATTATaGCCATGGGTTCCAGTTTGC | + |
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Preference number: 5 (lower is better) Translates to: YYPANTGRTRGGAQPGHPDTLLL*PWVPVC Trigger: GCAAACTGGAACCCATGGCAATAATAGGAGGGTGTC...AGGGTGTCCAGGCTGGGCCCCTCCCCTGGTCCTCCCAGTGTTTGCTGGATAATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000399775.3 |
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