RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ENG (Homo sapiens)

Ensembl gene IDs: ENSG00000106991

Ensembl transcript IDs: ENST00000344849.4, ENST00000373203.9, ENST00000462196.1, ENST00000480266.5, ENST00000486329.1

Found 623 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGGCAGGCCCAGGACAAGCAGCTTGGCTACTCCCCCTCTGCTGGCTaGCCGACCGGCAGAGGGGGCTCCATGTGGCAGGAGCTAGGCTCC +
Preference number: 1 (lower is better)
Translates to: GQAQDKQLGYSPSAG*PTGRGGSMWQELGS
Trigger: GGAGCCTAGCTCCTGCCACATGGAGCCCCCTCTGCCGGTCGGGCAGCCAGCAGAGGGGGAGTAGCCAAGCTGCTTGTCCTGGGCCTGCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
3UTR CCA 90 bp ATGCTGCTGGTGGAGCAGGGGGTGCTCTGGGTGCTCCCGATGCTGTaGTTGGTGCTGCTGCTCTCCGAGGAGGCCGGGGCAGCCACCGCC +
Preference number: 1 (lower is better)
Translates to: MLLVEQGVLWVLPML*LVLLLSEEAGAATA
Trigger: GGCGGTGGCTGCCCCGGCCTCCTCGGAGAGCAGCAGCACCAACCACAGCATCGGGAGCACCCAGAGCACCCCCTGCTCCACCAGCAGCAT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344849.4
3UTR CCA 90 bp GTGGCAGGAGCTAGGCTCCCAACGCCCACTGTTCTTGCCACCCTCTaGGCTCCCAGGCTGGGCTCCGCTAGGCTCCTGTCTCCCCTGCCA +
Preference number: 1 (lower is better)
Translates to: VAGARLPTPTVLATL*APRLGSARLLSPLP
Trigger: TGGCAGGGGAGACAGGAGCCTAGCGGAGCCCAGCCTGGGAGCCCAGAGGGTGGCAAGAACAGTGGGCGTTGGGAGCCTAGCTCCTGCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
3UTR GCA 90 bp TCTGGGTCGAGTGGAGGACTGGCTCCCAGGGTGAGTTCACACCAGTaGTCCCAGCTGGCGGCTGCTCAGTCTCTCCTGCTGGGCGAGCGC +
Preference number: 1 (lower is better)
Translates to: SGSSGGLAPRVSSHQ*SQLAAAQSLLLGER
Trigger: GCGCTCGCCCAGCAGGAGAGACTGAGCAGCCGCCAGCTGGGAGCACTGGTGTGAACTCACCCTGGGAGCCAGTCCTCCACTCGACCCAGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
3UTR CCA 90 bp TACTCCCCCTCTGCTGGCTGCCCGACCGGCAGAGGGGGCTCCATGTaGCAGGAGCTAGGCTCCCAACGCCCACTGTTCTTGCCACCCTCT +
Preference number: 1 (lower is better)
Translates to: YSPSAGCPTGRGGSM*QELGSQRPLFLPPS
Trigger: AGAGGGTGGCAAGAACAGTGGGCGTTGGGAGCCTAGCTCCTGCCACATGGAGCCCCCTCTGCCGGTCGGGCAGCCAGCAGAGGGGGAGTA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
3UTR CCA 90 bp GGCGGGAAGGGTAGGCGCGGAGAGCAGGCTCCATTCTGGGTCGAGTaGAGGACTGGCTCCCAGGGTGAGTTCACACCAGTGCTCCCAGCT +
Preference number: 1 (lower is better)
Translates to: GGKGRRGEQAPFWVE*RTGSQGEFTPVLPA
Trigger: AGCTGGGAGCACTGGTGTGAACTCACCCTGGGAGCCAGTCCTCCACTCGACCCAGAATGGAGCCTGCTCTCCGCGCCTACCCTTCCCGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
3UTR CCA 90 bp GGCTCCCAACGCCCACTGTTCTTGCCACCCTCTGGGCTCCCAGGCTaGGCTCCGCTAGGCTCCTGTCTCCCCTGCCAGTTAGTTAGGCAA +
Preference number: 1 (lower is better)
Translates to: GSQRPLFLPPSGLPG*APLGSCLPCQLVRQ
Trigger: TTGCCTAACTAACTGGCAGGGGAGACAGGAGCCTAGCGGAGCCCAGCCTGGGAGCCCAGAGGGTGGCAAGAACAGTGGGCGTTGGGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
3UTR TCA 90 bp AGAGCAGGCTCCATTCTGGGTCGAGTGGAGGACTGGCTCCCAGGGTaGGTTCACACCAGTGCTCCCAGCTGGCGGCTGCTCAGTCTCTCC +
Preference number: 1 (lower is better)
Translates to: RAGSILGRVEDWLPG*VHTSAPSWRLLSLS
Trigger: GGAGAGACTGAGCAGCCGCCAGCTGGGAGCACTGGTGTGAACTCACCCTGGGAGCCAGTCCTCCACTCGACCCAGAATGGAGCCTGCTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
3UTR CCA 90 bp GGCTCTGGGCTGGGCCCTCTTCTCTTCCCAGCGGGGAGGTGCTGTTaGCCTGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCC +
Preference number: 1 (lower is better)
Translates to: GSGLGPLLFPAGRCC*PGWAGLNLFQVLPS
Trigger: GGAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCAGGCCAACAGCACCTCCCCGCTGGGAAGAGAAGAGGGCCCAGCCCAGAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
3UTR CCA 90 bp TGGGCAGCCATATCCCAGACCCACTGGGTTGAAGGTTCTGTGGGGTaGAGGGACCCCAAGGTGTTCCAAGCCAGTGGCTGCACTGGCAGC +
Preference number: 1 (lower is better)
Translates to: WAAISQTHWVEGSVG*RDPKVFQASGCTGS
Trigger: GCTGCCAGTGCAGCCACTGGCTTGGAACACCTTGGGGTCCCTCCACCCCACAGAACCTTCAACCCAGTGGGTCTGGGATATGGCTGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
3UTR CCA 90 bp CTGGGCCCTCTTCTCTTCCCAGCGGGGAGGTGCTGTTGGCCTGGCTaGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCCTGCCCAGCT +
Preference number: 1 (lower is better)
Translates to: LGPLLFPAGRCCWPG*AGLNLFQVLPSCPA
Trigger: AGCTGGGCAGGAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCAGGCCAACAGCACCTCCCCGCTGGGAAGAGAAGAGGGCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
3UTR CCA 90 bp TCTCCTGGGCAGCCATATCCCAGACCCACTGGGTTGAAGGTTCTGTaGGGTGGAGGGACCCCAAGGTGTTCCAAGCCAGTGGCTGCACTG +
Preference number: 1 (lower is better)
Translates to: SPGQPYPRPTGLKVL*GGGTPRCSKPVAAL
Trigger: CAGTGCAGCCACTGGCTTGGAACACCTTGGGGTCCCTCCACCCCACAGAACCTTCAACCCAGTGGGTCTGGGATATGGCTGCCCAGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
3UTR TCA 90 bp TTCTCTTCCCAGCGGGGAGGTGCTGTTGGCCTGGCTGGGCTGGCCTaGATCTGTTTCAAGTTCTCCCTTCCTGCCCAGCTCAGTTCACCA +
Preference number: 1 (lower is better)
Translates to: FSSQRGGAVGLAGLA*ICFKFSLPAQLSSP
Trigger: TGGTGAACTGAGCTGGGCAGGAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCAGGCCAACAGCACCTCCCCGCTGGGAAGAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
3UTR CCA 90 bp TCTGTTTCAAGTTCTCCCTTCCTGCCCAGCTCAGTTCACCAGTGCTaGATCCAGGTTCAAATGACAGGGACTTGGGTTTTTACAACAGCG +
Preference number: 1 (lower is better)
Translates to: SVSSSPFLPSSVHQC*IQVQMTGTWVFTTA
Trigger: CGCTGTTGTAAAAACCCAAGTCCCTGTCATTTGAACCTGGATCCAGCACTGGTGAACTGAGCTGGGCAGGAAGGGAGAACTTGAAACAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
3UTR GCA 90 bp GAATCTGTTTCAAGTTCTCCCTTCCTGCCCAGCTCAGTTCACCAGTaGTGGATCCAGGTTCAAATGACAGGGACTTGGGTTTTTACAACA +
Preference number: 1 (lower is better)
Translates to: ESVSSSPFLPSSVHQ*WIQVQMTGTWVFTT
Trigger: TGTTGTAAAAACCCAAGTCCCTGTCATTTGAACCTGGATCCAGCACTGGTGAACTGAGCTGGGCAGGAAGGGAGAACTTGAAACAGATTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
3UTR-3UTR CCA 90 bp CTGTTCTTGCCACCCTCTGGGCTCCCAGGCTGGGCTCCGCTAGGCTCCTGTCTCCTGGGCTCCCCCGGGTaGATGGAGGGGCCCGGCATG +
Preference number: 2 (lower is better)
Translates to: LFLPPSGLPGWAPLGSCLLGSPG*MEGPGM
Trigger: CATGCCGGGCCCCTCCATCCACCCGGGGGAGCCCAG...GAGACAGGAGCCTAGCGGAGCCCAGCCTGGGAGCCCAGAGGGTGGCAAGAACAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344849.4
3UTR-3UTR CCA 90 bp AGGGAGGCGGGAAGGGTAGGCGCGGAGAGCAGGCTCCATTCTGGGTCGAGTGGACGGAGGTCAGGGTCCTaGCCAGGGCCCCTCAATCCC +
Preference number: 2 (lower is better)
Translates to: REAGRVGAESRLHSGSSGRRSGS*PGPLNP
Trigger: GGGATTGAGGGGCCCTGGCCAGGACCCTGACCTCCG...TCCACTCGACCCAGAATGGAGCCTGCTCTCCGCGCCTACCCTTCCCGCCTCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344849.4
3UTR-3UTR GCA 90 bp GGTAGGCGCGGAGAGCAGGCTCCATTCTGGGTCGAGTGGAGGACTGGCTCCCAGGGGGCTATGCCATGCTaGTGGTGGAGCAGGGGGTGC +
Preference number: 2 (lower is better)
Translates to: GRRGEQAPFWVEWRTGSQGAMPC*WWSRGC
Trigger: GCACCCCCTGCTCCACCAGCAGCATGGCATAGCCCC...CTGGGAGCCAGTCCTCCACTCGACCCAGAATGGAGCCTGCTCTCCGCGCCTACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000344849.4
3UTR-3UTR GCA 90 bp GGGCTCCATGTGGCAGGAGCTAGGCTCCCAACGCCCACTGTTCTTGCCACCCTCTTCCCAGCGGGGAGGTaGTGTTGGCCTGGCTGGGCT +
Preference number: 2 (lower is better)
Translates to: GLHVAGARLPTPTVLATLFPAGR*CWPGWA
Trigger: AGCCCAGCCAGGCCAACAGCACCTCCCCGCTGGGAA...GAGGGTGGCAAGAACAGTGGGCGTTGGGAGCCTAGCTCCTGCCACATGGAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
3UTR-3UTR GCA 90 bp ACTGTTCTTGCCACCCTCTGGGCTCCCAGGCTGGGCTCCGCTAGGCTCCTGTCTTGCTGTGGTTGGTGCTaGTGCTCTCCGAGGAGGCCG +
Preference number: 2 (lower is better)
Translates to: TVLATLWAPRLGSARLLSCCGWC*CSPRRP
Trigger: CGGCCTCCTCGGAGAGCAGCAGCACCAACCACAGCA...AGACAGGAGCCTAGCGGAGCCCAGCCTGGGAGCCCAGAGGGTGGCAAGAACAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344849.4
3UTR-3UTR CCA 90 bp AGTTCAGGTGTGGAGGCCGCAGGGATAGATCCAGGTGGCTCTGGGCTGGGCCCTACCAGTGCTCCCAGCTaGCGGCTGCTCAGTCTCTCC +
Preference number: 2 (lower is better)
Translates to: SSGVEAAGIDPGGSGLGPTSAPS*RLLSLS
Trigger: GGAGAGACTGAGCAGCCGCCAGCTGGGAGCACTGGT...AGGGCCCAGCCCAGAGCCACCTGGATCTATCCCTGCGGCCTCCACACCTGAACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
3UTR-3UTR GCA 90 bp GGCAGAGGGGGCTCCATGTGGCAGGAGCTAGGCTCCCAACGCCCACTGTTCTTGTCTGGGTGCTCCCGATaGTGTGGTTGGTGCTGCTGC +
Preference number: 2 (lower is better)
Translates to: GRGGSMWQELGSQRPLFLSGCSR*CGWCCC
Trigger: GCAGCAGCACCAACCACAGCATCGGGAGCACCCAGA...CAAGAACAGTGGGCGTTGGGAGCCTAGCTCCTGCCACATGGAGCCCCCTCTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344849.4
3UTR-3UTR CCA 90 bp ACTGTTCTTGCCACCCTCTGGGCTCCCAGGCTGGGCTCCGCTAGGCTCCTGTCTGAGCAGGCTCCATTCTaGGTCGAGTGGAGGACTGGC +
Preference number: 2 (lower is better)
Translates to: TVLATLWAPRLGSARLLSEQAPF*VEWRTG
Trigger: GCCAGTCCTCCACTCGACCCAGAATGGAGCCTGCTC...AGACAGGAGCCTAGCGGAGCCCAGCCTGGGAGCCCAGAGGGTGGCAAGAACAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
3UTR CAA 90 bp TGGCTCTGGGCTGGGCCCTCTTCTCTTCCCAGCGGGGAGGTGCTGTaGGCCTGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTC +
Preference number: 2 (lower is better)
Translates to: WLWAGPSSLPSGEVL*AWLGWPESVSSSPF
Trigger: GAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCAGGCCAACAGCACCTCCCCGCTGGGAAGAGAAGAGGGCCCAGCCCAGAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
3UTR-3UTR GCA 90 bp TGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCCTGCCCAGCTCAGTTCCACGGGCTCCCGCTTaGTGGGGGAACCTGGGAGCG +
Preference number: 2 (lower is better)
Translates to: WLGWPESVSSSPFLPSSVPRAPA*WGNLGA
Trigger: CGCTCCCAGGTTCCCCCAGCAAGCGGGAGCCCGTGG...AACTGAGCTGGGCAGGAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344849.4
3UTR-3UTR CCA 90 bp ACTGTTCTTGCCACCCTCTGGGCTCCCAGGCTGGGCTCCGCTAGGCTCCTGTCTGAAGGTTCTGTGGGGTaGAGGGACCCCAAGGTGTTC +
Preference number: 2 (lower is better)
Translates to: TVLATLWAPRLGSARLLSEGSVG*RDPKVF
Trigger: GAACACCTTGGGGTCCCTCCACCCCACAGAACCTTC...AGACAGGAGCCTAGCGGAGCCCAGCCTGGGAGCCCAGAGGGTGGCAAGAACAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
3UTR-3UTR CCA 90 bp CCAGGCTGGGCTCCGCTAGGCTCCTGTCTCCCCTGCCAGTTAGTTAGGCAAGTTCAGGTGGCTCTGGGCTaGGCCCTCTTCTCTTCCCAG +
Preference number: 2 (lower is better)
Translates to: PGWAPLGSCLPCQLVRQVQVALG*ALFSSQ
Trigger: CTGGGAAGAGAAGAGGGCCCAGCCCAGAGCCACCTG...AACTTGCCTAACTAACTGGCAGGGGAGACAGGAGCCTAGCGGAGCCCAGCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
3UTR-3UTR GCA 90 bp CTGCCCAGCTCAGTTCACCAGTGCTGGATCCAGGTTCAAATGACAGGGACTTGGGCCGGGGCTATGCCATaGTGCTGGTGGAGCAGGGGG +
Preference number: 2 (lower is better)
Translates to: LPSSVHQCWIQVQMTGTWAGAMP*CWWSRG
Trigger: CCCCCTGCTCCACCAGCAGCATGGCATAGCCCCGGC...CCAAGTCCCTGTCATTTGAACCTGGATCCAGCACTGGTGAACTGAGCTGGGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344849.4
3UTR-3UTR GCA 90 bp GTGCTGTTGGCCTGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCCTGCTCCCAGCTGGCGGCTaGTCAGTCTCTCCTGCTGGG +
Preference number: 2 (lower is better)
Translates to: VLLAWLGWPESVSSSPFLLPAGG*SVSPAG
Trigger: CCCAGCAGGAGAGACTGAGCAGCCGCCAGCTGGGAG...CAGGAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCAGGCCAACAGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
3UTR-3UTR CCA 90 bp TCCATGTGGCAGGAGCTAGGCTCCCAACGCCCACTGTTCTTGCCACCCTCTGGGGAAGGTTCTGTGGGGTaGAGGGACCCCAAGGTGTTC +
Preference number: 2 (lower is better)
Translates to: SMWQELGSQRPLFLPPSGEGSVG*RDPKVF
Trigger: GAACACCTTGGGGTCCCTCCACCCCACAGAACCTTC...CCCAGAGGGTGGCAAGAACAGTGGGCGTTGGGAGCCTAGCTCCTGCCACATGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
3UTR-3UTR TCA 90 bp TGCTGTTGGCCTGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCCTGCGACTGGCTCCCAGGGTaGGTTCACACCAGTGCTCCC +
Preference number: 2 (lower is better)
Translates to: CCWPGWAGLNLFQVLPSCDWLPG*VHTSAP
Trigger: GGGAGCACTGGTGTGAACTCACCCTGGGAGCCAGTC...GCAGGAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCAGGCCAACAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
3UTR-3UTR TCA 90 bp TGGCCTGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCCTGCCCAGCTCCAGACCCACTGGGTTaGAGGTTCTGTGGGGTGGAG +
Preference number: 2 (lower is better)
Translates to: WPGWAGLNLFQVLPSCPAPDPLG*RFCGVE
Trigger: CTCCACCCCACAGAACCTTCAACCCAGTGGGTCTGG...AGCTGGGCAGGAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCAGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
3UTR-3UTR GCA 90 bp TGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCCTGCCCAGCTCAGTTCTCCCAGCTGGCGGCTaGTCAGTCTCTCCTGCTGGG +
Preference number: 2 (lower is better)
Translates to: WLGWPESVSSSPFLPSSVLPAGG*SVSPAG
Trigger: CCCAGCAGGAGAGACTGAGCAGCCGCCAGCTGGGAG...AACTGAGCTGGGCAGGAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
3UTR-3UTR CCA 90 bp GAGGTGCTGTTGGCCTGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCGGTGTTCCAAGCCAGTaGCTGCACTGGCAGCAGGCC +
Preference number: 2 (lower is better)
Translates to: EVLLAWLGWPESVSSSPFGVPSQ*LHWQQA
Trigger: GGCCTGCTGCCAGTGCAGCCACTGGCTTGGAACACC...GAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCAGGCCAACAGCACCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
3UTR-3UTR CCA 90 bp ACTGTTCTTGCCACCCTCTGGGCTCCCAGGCTGGGCTCCGCTAGGCTCCTGTCTATATCCCAGACCCACTaGGTTGAAGGTTCTGTGGGG +
Preference number: 2 (lower is better)
Translates to: TVLATLWAPRLGSARLLSISQTH*VEGSVG
Trigger: CCCCACAGAACCTTCAACCCAGTGGGTCTGGGATAT...AGACAGGAGCCTAGCGGAGCCCAGCCTGGGAGCCCAGAGGGTGGCAAGAACAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
3UTR-3UTR CCA 90 bp GGGCTCCATGTGGCAGGAGCTAGGCTCCCAACGCCCACTGTTCTTGCCACCCTCTTGGCCTGGCTGGGCTaGCCTGAATCTGTTTCAAGT +
Preference number: 2 (lower is better)
Translates to: GLHVAGARLPTPTVLATLLAWLG*PESVSS
Trigger: ACTTGAAACAGATTCAGGCCAGCCCAGCCAGGCCAA...GAGGGTGGCAAGAACAGTGGGCGTTGGGAGCCTAGCTCCTGCCACATGGAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
3UTR-3UTR TCA 90 bp GAGGTGCTGTTGGCCTGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCCCAGACCCACTGGGTTaGAGGTTCTGTGGGGTGGAG +
Preference number: 2 (lower is better)
Translates to: EVLLAWLGWPESVSSSPFPDPLG*RFCGVE
Trigger: CTCCACCCCACAGAACCTTCAACCCAGTGGGTCTGG...GAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCAGGCCAACAGCACCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
3UTR-3UTR GCA 90 bp CCCAGCTCAGTTCACCAGTGCTGGATCCAGGTTCAAATGACAGGGACTTGGGTTTGTGGTTGGTGCTGCTaGTCTCCGAGGAGGCCGGGG +
Preference number: 2 (lower is better)
Translates to: PSSVHQCWIQVQMTGTWVCGWCC*SPRRPG
Trigger: CCCCGGCCTCCTCGGAGAGCAGCAGCACCAACCACA...AACCCAAGTCCCTGTCATTTGAACCTGGATCCAGCACTGGTGAACTGAGCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344849.4
3UTR-3UTR GCA 90 bp TGCTGTTGGCCTGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCCTGCGTGAGTTCACACCAGTaGTCCCAGCTGGCGGCTGCT +
Preference number: 2 (lower is better)
Translates to: CCWPGWAGLNLFQVLPSCVSSHQ*SQLAAA
Trigger: AGCAGCCGCCAGCTGGGAGCACTGGTGTGAACTCAC...GCAGGAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCAGGCCAACAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
3UTR-3UTR CCA 90 bp GAGGTGCTGTTGGCCTGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCCCATTCTGGGTCGAGTaGAGGACTGGCTCCCAGGGT +
Preference number: 2 (lower is better)
Translates to: EVLLAWLGWPESVSSSPFPFWVE*RTGSQG
Trigger: ACCCTGGGAGCCAGTCCTCCACTCGACCCAGAATGG...GAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCAGGCCAACAGCACCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
3UTR-3UTR CCA 90 bp GTGCTGTTGGCCTGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCCTGGAGCAGGCTCCATTCTaGGTCGAGTGGAGGACTGGC +
Preference number: 2 (lower is better)
Translates to: VLLAWLGWPESVSSSPFLEQAPF*VEWRTG
Trigger: GCCAGTCCTCCACTCGACCCAGAATGGAGCCTGCTC...CAGGAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCAGGCCAACAGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
3UTR-3UTR CCA 90 bp TGCTGTTGGCCTGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCCTGCGGGTTGAAGGTTCTGTaGGGTGGAGGGACCCCAAGG +
Preference number: 2 (lower is better)
Translates to: CCWPGWAGLNLFQVLPSCGLKVL*GGGTPR
Trigger: CCTTGGGGTCCCTCCACCCCACAGAACCTTCAACCC...GCAGGAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCAGGCCAACAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
3UTR-3UTR CCA 90 bp AGGTGCTGTTGGCCTGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCCGGGTTGAAGGTTCTGTaGGGTGGAGGGACCCCAAGG +
Preference number: 2 (lower is better)
Translates to: RCCWPGWAGLNLFQVLPSGLKVL*GGGTPR
Trigger: CCTTGGGGTCCCTCCACCCCACAGAACCTTCAACCC...GGAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCAGGCCAACAGCACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
3UTR-3UTR CCA 90 bp GAGGTGCTGTTGGCCTGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCAAGTGGTCTGTCTCCTaGGCAGCCATATCCCAGACC +
Preference number: 2 (lower is better)
Translates to: EVLLAWLGWPESVSSSPFKWSVS*AAISQT
Trigger: GGTCTGGGATATGGCTGCCCAGGAGACAGACCACTT...GAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCAGGCCAACAGCACCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
3UTR-3UTR CCA 90 bp GTGCTGGATCCAGGTTCAAATGACAGGGACTTGGGTTTTTACAACAGCGTGGCAACCAGTGCTCCCAGCTaGCGGCTGCTCAGTCTCTCC +
Preference number: 2 (lower is better)
Translates to: VLDPGSNDRDLGFYNSVATSAPS*RLLSLS
Trigger: GGAGAGACTGAGCAGCCGCCAGCTGGGAGCACTGGT...TGCCACGCTGTTGTAAAAACCCAAGTCCCTGTCATTTGAACCTGGATCCAGCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
3UTR-3UTR CCA 90 bp CCCAGCTCAGTTCACCAGTGCTGGATCCAGGTTCAAATGACAGGGACTTGGGTTGAAGGTTCTGTGGGGTaGAGGGACCCCAAGGTGTTC +
Preference number: 2 (lower is better)
Translates to: PSSVHQCWIQVQMTGTWVEGSVG*RDPKVF
Trigger: GAACACCTTGGGGTCCCTCCACCCCACAGAACCTTC...AACCCAAGTCCCTGTCATTTGAACCTGGATCCAGCACTGGTGAACTGAGCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
3UTR-3UTR GCA 90 bp GTGCTGGATCCAGGTTCAAATGACAGGGACTTGGGTTTTTACAACAGCGTGGCAGTGAGTTCACACCAGTaGTCCCAGCTGGCGGCTGCT +
Preference number: 2 (lower is better)
Translates to: VLDPGSNDRDLGFYNSVAVSSHQ*SQLAAA
Trigger: AGCAGCCGCCAGCTGGGAGCACTGGTGTGAACTCAC...TGCCACGCTGTTGTAAAAACCCAAGTCCCTGTCATTTGAACCTGGATCCAGCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
3UTR-3UTR CCA 90 bp CCCAGCTCAGTTCACCAGTGCTGGATCCAGGTTCAAATGACAGGGACTTGGGTTAAGTGGTCTGTCTCCTaGGCAGCCATATCCCAGACC +
Preference number: 2 (lower is better)
Translates to: PSSVHQCWIQVQMTGTWVKWSVS*AAISQT
Trigger: GGTCTGGGATATGGCTGCCCAGGAGACAGACCACTT...AACCCAAGTCCCTGTCATTTGAACCTGGATCCAGCACTGGTGAACTGAGCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
3UTR-3UTR TCA 90 bp TGGCCTGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCCTGCCCAGCTGGATCCAGGTTCAAATaGCAGGGACTTGGGTTTTTA +
Preference number: 2 (lower is better)
Translates to: WPGWAGLNLFQVLPSCPAGSRFK*QGLGFL
Trigger: TAAAAACCCAAGTCCCTGTCATTTGAACCTGGATCC...AGCTGGGCAGGAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCAGGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
3UTR-3UTR GCA 90 bp AGCTCAGTTCACCAGTGCTGGATCCAGGTTCAAATGACAGGGACTTGGGTTTTTCGATGCTGTGGTTGGTaGTGCTGCTCTCCGAGGAGG +
Preference number: 2 (lower is better)
Translates to: SSVHQCWIQVQMTGTWVFRCCGW*CCSPRR
Trigger: CCTCCTCGGAGAGCAGCAGCACCAACCACAGCATCG...AAAAACCCAAGTCCCTGTCATTTGAACCTGGATCCAGCACTGGTGAACTGAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344849.4
3UTR-3UTR GCA 90 bp AGGTGCTGTTGGCCTGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCCAGCTCAGTTCACCAGTaGTGGATCCAGGTTCAAATG +
Preference number: 2 (lower is better)
Translates to: RCCWPGWAGLNLFQVLPSSSVHQ*WIQVQM
Trigger: CATTTGAACCTGGATCCAGCACTGGTGAACTGAGCT...GGAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCAGGCCAACAGCACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
3UTR-3UTR CCA 90 bp CCCAGCTCAGTTCACCAGTGCTGGATCCAGGTTCAAATGACAGGGACTTGGGTTATATCCCAGACCCACTaGGTTGAAGGTTCTGTGGGG +
Preference number: 2 (lower is better)
Translates to: PSSVHQCWIQVQMTGTWVISQTH*VEGSVG
Trigger: CCCCACAGAACCTTCAACCCAGTGGGTCTGGGATAT...AACCCAAGTCCCTGTCATTTGAACCTGGATCCAGCACTGGTGAACTGAGCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
3UTR-3UTR CCA 90 bp GTGCTGTTGGCCTGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCCTGGTTTTTACAACAGCGTaGCAAGTGGTCTGTCTCCTG +
Preference number: 2 (lower is better)
Translates to: VLLAWLGWPESVSSSPFLVFTTA*QVVCLL
Trigger: CAGGAGACAGACCACTTGCCACGCTGTTGTAAAAAC...CAGGAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCAGGCCAACAGCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
3UTR-3UTR TCA 90 bp TGCTGTTGGCCTGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCCTGCGGATCCAGGTTCAAATaGCAGGGACTTGGGTTTTTA +
Preference number: 2 (lower is better)
Translates to: CCWPGWAGLNLFQVLPSCGSRFK*QGLGFL
Trigger: TAAAAACCCAAGTCCCTGTCATTTGAACCTGGATCC...GCAGGAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCAGGCCAACAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
3UTR CCA 72 bp GTGGAGCAGGGGGTGCTCTGGGTGCTCCCGATGCTGTaGTTGGTGCTGCTGCTCTCCGAGGAGGCCGGGGCA +
Preference number: 3 (lower is better)
Translates to: VEQGVLWVLPML*LVLLLSEEAGA
Trigger: TGCCCCGGCCTCCTCGGAGAGCAGCAGCACCAACCACAGCATCGGGAGCACCCAGAGCACCCCCTGCTCCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344849.4
3UTR GCA 72 bp CAGGACAAGCAGCTTGGCTACTCCCCCTCTGCTGGCTaGCCGACCGGCAGAGGGGGCTCCATGTGGCAGGAG +
Preference number: 3 (lower is better)
Translates to: QDKQLGYSPSAG*PTGRGGSMWQE
Trigger: CTCCTGCCACATGGAGCCCCCTCTGCCGGTCGGGCAGCCAGCAGAGGGGGAGTAGCCAAGCTGCTTGTCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
3UTR CCA 72 bp GGCGGGAAGGGTAGGCGCGGAGAGCAGGCTCCATTCTaGGTCGAGTGGAGGACTGGCTCCCAGGGTGAGTTC +
Preference number: 3 (lower is better)
Translates to: GGKGRRGEQAPF*VEWRTGSQGEF
Trigger: GAACTCACCCTGGGAGCCAGTCCTCCACTCGACCCAGAATGGAGCCTGCTCTCCGCGCCTACCCTTCCCGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
3UTR CCA 72 bp GGTGAATACACAGGGGCAGGCCCAGGACAAGCAGCTTaGCTACTCCCCCTCTGCTGGCTGCCCGACCGGCAG +
Preference number: 3 (lower is better)
Translates to: GEYTGAGPGQAA*LLPLCWLPDRQ
Trigger: CTGCCGGTCGGGCAGCCAGCAGAGGGGGAGTAGCCAAGCTGCTTGTCCTGGGCCTGCCCCTGTGTATTCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
3UTR TCA 72 bp TCCATTCTGGGTCGAGTGGAGGACTGGCTCCCAGGGTaGGTTCACACCAGTGCTCCCAGCTGGCGGCTGCTC +
Preference number: 3 (lower is better)
Translates to: SILGRVEDWLPG*VHTSAPSWRLL
Trigger: GAGCAGCCGCCAGCTGGGAGCACTGGTGTGAACTCACCCTGGGAGCCAGTCCTCCACTCGACCCAGAATGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
3UTR GCA 72 bp AGTGGAGGACTGGCTCCCAGGGTGAGTTCACACCAGTaGTCCCAGCTGGCGGCTGCTCAGTCTCTCCTGCTG +
Preference number: 3 (lower is better)
Translates to: SGGLAPRVSSHQ*SQLAAAQSLLL
Trigger: CAGCAGGAGAGACTGAGCAGCCGCCAGCTGGGAGCACTGGTGTGAACTCACCCTGGGAGCCAGTCCTCCACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
3UTR GCA 72 bp CTCCCAGGCTGGGCTCCGCTAGGCTCCTGTCTCCCCTaGCAGTTAGTTAGGCAAGTTCAGGTGTGGAGGCCG +
Preference number: 3 (lower is better)
Translates to: LPGWAPLGSCLP*QLVRQVQVWRP
Trigger: CGGCCTCCACACCTGAACTTGCCTAACTAACTGGCAGGGGAGACAGGAGCCTAGCGGAGCCCAGCCTGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
3UTR CCA 72 bp GGTAGGCGCGGAGAGCAGGCTCCATTCTGGGTCGAGTaGAGGACTGGCTCCCAGGGTGAGTTCACACCAGTG +
Preference number: 3 (lower is better)
Translates to: GRRGEQAPFWVE*RTGSQGEFTPV
Trigger: CACTGGTGTGAACTCACCCTGGGAGCCAGTCCTCCACTCGACCCAGAATGGAGCCTGCTCTCCGCGCCTACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
3UTR CCA 72 bp ATATCCCAGACCCACTGGGTTGAAGGTTCTGTGGGGTaGAGGGACCCCAAGGTGTTCCAAGCCAGTGGCTGC +
Preference number: 3 (lower is better)
Translates to: ISQTHWVEGSVG*RDPKVFQASGC
Trigger: GCAGCCACTGGCTTGGAACACCTTGGGGTCCCTCCACCCCACAGAACCTTCAACCCAGTGGGTCTGGGATAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
3UTR CCA 72 bp CAGCCATATCCCAGACCCACTGGGTTGAAGGTTCTGTaGGGTGGAGGGACCCCAAGGTGTTCCAAGCCAGTG +
Preference number: 3 (lower is better)
Translates to: QPYPRPTGLKVL*GGGTPRCSKPV
Trigger: CACTGGCTTGGAACACCTTGGGGTCCCTCCACCCCACAGAACCTTCAACCCAGTGGGTCTGGGATATGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
3UTR CCA 72 bp CTTCTCTTCCCAGCGGGGAGGTGCTGTTGGCCTGGCTaGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCC +
Preference number: 3 (lower is better)
Translates to: LLFPAGRCCWPG*AGLNLFQVLPS
Trigger: GGAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCAGGCCAACAGCACCTCCCCGCTGGGAAGAGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
3UTR-3UTR CAA 90 bp GAGGTGCTGTTGGCCTGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCCCCAGACCCACTGGGTaGAAGGTTCTGTGGGGTGGA +
Preference number: 3 (lower is better)
Translates to: EVLLAWLGWPESVSSSPFPRPTG*KVLWGG
Trigger: TCCACCCCACAGAACCTTCAACCCAGTGGGTCTGGG...GAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCAGGCCAACAGCACCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
3UTR GCA 72 bp TGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCCTaGCCAGCTCAGTTCACCAGTGCTGGATCCAGGTTC +
Preference number: 3 (lower is better)
Translates to: WAGLNLFQVLPS*PAQFTSAGSRF
Trigger: GAACCTGGATCCAGCACTGGTGAACTGAGCTGGGCAGGAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
3UTR TCA 72 bp CCAGCTCAGTTCACCAGTGCTGGATCCAGGTTCAAATaGCAGGGACTTGGGTTTTTACAACAGCGTGGCAAG +
Preference number: 3 (lower is better)
Translates to: PAQFTSAGSRFK*QGLGFLQQRGK
Trigger: CTTGCCACGCTGTTGTAAAAACCCAAGTCCCTGTCATTTGAACCTGGATCCAGCACTGGTGAACTGAGCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp GCCGGGGCAGCCACCGCCACCACGGGCTCCCGCTTGCTGGGGGAACCTGGGAGCCGGGCTCCCGCTTGCTaGGGGAACCTGGGAGCGGGA +
Preference number: 4 (lower is better)
Translates to: AGAATATTGSRLLGEPGSRAPAC*GNLGAG
Trigger: TCCCGCTCCCAGGTTCCCCCAGCAAGCGGGAGCCCG...GCTCCCAGGTTCCCCCAGCAAGCGGGAGCCCGTGGTGGCGGTGGCTGCCCCGGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000344849.4
CDS-3UTR GCA 90 bp GCCACCACGGGCTCCCGCTTGCTGGGGGAACCTGGGAGCGGGAGCGGGGGCAGGGAGCGACGGCGTCCCTaGTCCAGCCTTCTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: ATTGSRLLGEPGSGSGGRERRRP*SSLLGW
Trigger: CCACCCCAGAAGGCTGGAGCAGGGACGCCGTCGCTC...CCTGCCCCCGCTCCCGCTCCCAGGTTCCCCCAGCAAGCGGGAGCCCGTGGTGGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000344849.4
CDS-3UTR GCA 90 bp GGGGCAGCCACCGCCACCACGGGCTCCCGCTTGCTGGGGGAACCTGGGAGCGGGGCAGGCTCACACAGTTaGCCTTGGCCGCCCGGCCCT +
Preference number: 4 (lower is better)
Translates to: GAATATTGSRLLGEPGSGAGSHS*PWPPGP
Trigger: AGGGCCGGGCGGCCAAGGGCAACTGTGTGAGCCTGC...CCCGCTCCCAGGTTCCCCCAGCAAGCGGGAGCCCGTGGTGGCGGTGGCTGCCCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000344849.4
CDS-3UTR CCA 90 bp GCCGGGGCAGCCACCGCCACCACGGGCTCCCGCTTGCTGGGGGAACCTGGGAGCTCCATGCTGTCCACGTaGGGGCCTGTGCGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: AGAATATTGSRLLGEPGSSMLST*GPVRWA
Trigger: GGCCCAGCGCACAGGCCCCCACGTGGACAGCATGGA...GCTCCCAGGTTCCCCCAGCAAGCGGGAGCCCGTGGTGGCGGTGGCTGCCCCGGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000344849.4
CDS-3UTR CCA 90 bp GTGGTTGGTGCTGCTGCTCTCCGAGGAGGCCGGGGCAGCCACCGCCACCACGGGCCTGCTCCAGCCTTCTaGGGTGGCGGCCGAGGGGTC +
Preference number: 4 (lower is better)
Translates to: VVGAAALRGGRGSHRHHGPAPAF*GGGRGV
Trigger: GACCCCTCGGCCGCCACCCCAGAAGGCTGGAGCAGG...CCCGTGGTGGCGGTGGCTGCCCCGGCCTCCTCGGAGAGCAGCAGCACCAACCAC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344849.4
CDS-3UTR TCA 90 bp GCTGCTGCTCTCCGAGGAGGCCGGGGCAGCCACCGCCACCACGGGCTCCCGCTTATGGCATTGGGGGCCTaGGCCACGCAGCCCTTCGAG +
Preference number: 4 (lower is better)
Translates to: AAALRGGRGSHRHHGLPLMALGA*ATQPFE
Trigger: CTCGAAGGGCTGCGTGGCTCAGGCCCCCAATGCCAT...AAGCGGGAGCCCGTGGTGGCGGTGGCTGCCCCGGCCTCCTCGGAGAGCAGCAGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344849.4
CDS-3UTR TCA 90 bp GCCGGGGCAGCCACCGCCACCACGGGCTCCCGCTTGCTGGGGGAACCTGGGAGCAGTCAGCTCCAGCTGTaGCGGGCCCGTTGGGAACTC +
Preference number: 4 (lower is better)
Translates to: AGAATATTGSRLLGEPGSSQLQL*RARWEL
Trigger: GAGTTCCCAACGGGCCCGTCACAGCTGGAGCTGACT...GCTCCCAGGTTCCCCCAGCAAGCGGGAGCCCGTGGTGGCGGTGGCTGCCCCGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344849.4
CDS-3UTR TCA 90 bp GCCGGGGCAGCCACCGCCACCACGGGCTCCCGCTTGCTGGGGGAACCTGGGAGCGACTGGCTCCCAGGGTaGGTTCACACCAGTGCTCCC +
Preference number: 4 (lower is better)
Translates to: AGAATATTGSRLLGEPGSDWLPG*VHTSAP
Trigger: GGGAGCACTGGTGTGAACTCACCCTGGGAGCCAGTC...GCTCCCAGGTTCCCCCAGCAAGCGGGAGCCCGTGGTGGCGGTGGCTGCCCCGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344849.4
CDS-3UTR CCA 90 bp GCCGGGGCAGCCACCGCCACCACGGGCTCCCGCTTGCTGGGGGAACCTGGGAGCTGGGGGCCTGTGCGCTaGGCCTTATCCTGTGTCCAG +
Preference number: 4 (lower is better)
Translates to: AGAATATTGSRLLGEPGSWGPVR*ALSCVQ
Trigger: CTGGACACAGGATAAGGCCCAGCGCACAGGCCCCCA...GCTCCCAGGTTCCCCCAGCAAGCGGGAGCCCGTGGTGGCGGTGGCTGCCCCGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000344849.4
CDS-3UTR CCA 90 bp GCCACCACGGGCTCCCGCTTGCTGGGGGAACCTGGGAGCGGGAGCGGGGGCAGGAGTGACCCCTGGGCTTaGCCCAGTCGGAGGAGGATG +
Preference number: 4 (lower is better)
Translates to: ATTGSRLLGEPGSGSGGRSDPWA*PSRRRM
Trigger: CATCCTCCTCCGACTGGGCCAAGCCCAGGGGTCACT...CCTGCCCCCGCTCCCGCTCCCAGGTTCCCCCAGCAAGCGGGAGCCCGTGGTGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000344849.4
CDS-3UTR CCA 90 bp GGAGGCCGGGGCAGCCACCGCCACCACGGGCTCCCGCTTGCTGGGGGAACCTGGGGCCTGGAGGAAGTGTaGGCTGAGGTAGAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: GGRGSHRHHGLPLAGGTWGLEEV*AEVEAQ
Trigger: CTGGGCCTCTACCTCAGCCCACACTTCCTCCAGGCC...CCAGGTTCCCCCAGCAAGCGGGAGCCCGTGGTGGCGGTGGCTGCCCCGGCCTCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000344849.4
CDS-3UTR CCA 90 bp GCCGGGGCAGCCACCGCCACCACGGGCTCCCGCTTGCTGGGGGAACCTGGGAGCCTTGAGACCCGGTCTTaGGACGCAGGGCTACCGTGC +
Preference number: 4 (lower is better)
Translates to: AGAATATTGSRLLGEPGSLETRS*DAGLPC
Trigger: GCACGGTAGCCCTGCGTCCCAAGACCGGGTCTCAAG...GCTCCCAGGTTCCCCCAGCAAGCGGGAGCCCGTGGTGGCGGTGGCTGCCCCGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344849.4
CDS-3UTR TCA 90 bp GGAGGCCGGGGCAGCCACCGCCACCACGGGCTCCCGCTTGCTGGGGGAACCTGGCCAGACCCACTGGGTTaGAGGTTCTGTGGGGTGGAG +
Preference number: 4 (lower is better)
Translates to: GGRGSHRHHGLPLAGGTWPDPLG*RFCGVE
Trigger: CTCCACCCCACAGAACCTTCAACCCAGTGGGTCTGG...CCAGGTTCCCCCAGCAAGCGGGAGCCCGTGGTGGCGGTGGCTGCCCCGGCCTCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000344849.4
CDS-3UTR GCA 90 bp GTGGTTGGTGCTGCTGCTCTCCGAGGAGGCCGGGGCAGCCACCGCCACCACGGGGGGGCTATGCCATGCTaGTGGTGGAGCAGGGGGTGC +
Preference number: 4 (lower is better)
Translates to: VVGAAALRGGRGSHRHHGGAMPC*WWSRGC
Trigger: GCACCCCCTGCTCCACCAGCAGCATGGCATAGCCCC...CCCGTGGTGGCGGTGGCTGCCCCGGCCTCCTCGGAGAGCAGCAGCACCAACCAC
71% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000344849.4
CDS-3UTR CCA 90 bp GCTGCTGCTCTCCGAGGAGGCCGGGGCAGCCACCGCCACCACGGGCTCCCGCTTAGGGGTCAGGAGAAGTaGACACAGGGACGCGGGGCT +
Preference number: 4 (lower is better)
Translates to: AAALRGGRGSHRHHGLPLRGQEK*TQGRGA
Trigger: AGCCCCGCGTCCCTGTGTCCACTTCTCCTGACCCCT...AAGCGGGAGCCCGTGGTGGCGGTGGCTGCCCCGGCCTCCTCGGAGAGCAGCAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344849.4
CDS-3UTR CCA 90 bp GTGGTTGGTGCTGCTGCTCTCCGAGGAGGCCGGGGCAGCCACCGCCACCACGGGCTCACTGTGGGGGCCTaGGGTACTCACGCGTGTGCG +
Preference number: 4 (lower is better)
Translates to: VVGAAALRGGRGSHRHHGLTVGA*GTHACA
Trigger: CGCACACGCGTGAGTACCCCAGGCCCCCACAGTGAG...CCCGTGGTGGCGGTGGCTGCCCCGGCCTCCTCGGAGAGCAGCAGCACCAACCAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344849.4
CDS-3UTR CCA 90 bp GCCGGGGCAGCCACCGCCACCACGGGCTCCCGCTTGCTGGGGGAACCTGGGAGCAGAGGGGGCTCCATGTaGCAGGAGCTAGGCTCCCAA +
Preference number: 4 (lower is better)
Translates to: AGAATATTGSRLLGEPGSRGGSM*QELGSQ
Trigger: TTGGGAGCCTAGCTCCTGCCACATGGAGCCCCCTCT...GCTCCCAGGTTCCCCCAGCAAGCGGGAGCCCGTGGTGGCGGTGGCTGCCCCGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000344849.4
CDS-3UTR CCA 90 bp GGGGCAGCCACCGCCACCACGGGCTCCCGCTTGCTGGGGGAACCTGGGAGCGGGCCAGGACAAGCAGCTTaGCTACTCCCCCTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: GAATATTGSRLLGEPGSGPGQAA*LLPLCW
Trigger: CCAGCAGAGGGGGAGTAGCCAAGCTGCTTGTCCTGG...CCCGCTCCCAGGTTCCCCCAGCAAGCGGGAGCCCGTGGTGGCGGTGGCTGCCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000344849.4
CDS-3UTR CCA 90 bp GCCGGGGCAGCCACCGCCACCACGGGCTCCCGCTTGCTGGGGGAACCTGGGAGCGAACTCGGAGACGGATaGGGACACTCTGACCTGCAC +
Preference number: 4 (lower is better)
Translates to: AGAATATTGSRLLGEPGSELGDG*GHSDLH
Trigger: GTGCAGGTCAGAGTGTCCCCATCCGTCTCCGAGTTC...GCTCCCAGGTTCCCCCAGCAAGCGGGAGCCCGTGGTGGCGGTGGCTGCCCCGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344849.4
CDS-3UTR CCA 90 bp GCTGCTGCTCTCCGAGGAGGCCGGGGCAGCCACCGCCACCACGGGCTCCCGCTTGGGTTGAAGGTTCTGTaGGGTGGAGGGACCCCAAGG +
Preference number: 4 (lower is better)
Translates to: AAALRGGRGSHRHHGLPLGLKVL*GGGTPR
Trigger: CCTTGGGGTCCCTCCACCCCACAGAACCTTCAACCC...AAGCGGGAGCCCGTGGTGGCGGTGGCTGCCCCGGCCTCCTCGGAGAGCAGCAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344849.4
CDS-3UTR TCA 90 bp GGGGCAGCCACCGCCACCACGGGCTCCCGCTTGCTGGGGGAACCTGGGAGCGGGTCTGGATCAAGGACATaGGCAGCTCCGGGCTACAAG +
Preference number: 4 (lower is better)
Translates to: GAATATTGSRLLGEPGSGSGSRT*AAPGYK
Trigger: CTTGTAGCCCGGAGCTGCTCATGTCCTTGATCCAGA...CCCGCTCCCAGGTTCCCCCAGCAAGCGGGAGCCCGTGGTGGCGGTGGCTGCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344849.4
CDS-3UTR GCA 90 bp AGGGAGGCGGGAAGGGTAGGCGCGGAGAGCAGGCTCCATTCTGGGTCGAGTGGAGCGTGCCGCGGTCCATaGTGTCCACGTGGGGGCCTG +
Preference number: 4 (lower is better)
Translates to: REAGRVGAESRLHSGSSGACRGP*CPRGGL
Trigger: CAGGCCCCCACGTGGACAGCATGGACCGCGGCACGC...TCCACTCGACCCAGAATGGAGCCTGCTCTCCGCGCCTACCCTTCCCGCCTCCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344849.4
ENST00000373203.9
CDS-3UTR GCA 90 bp GGAGGCCGGGGCAGCCACCGCCACCACGGGCTCCCGCTTGCTGGGGGAACCTGGGGCCAGGTGCCATTTTaGTTGGATGCCTGGAGAGTC +
Preference number: 4 (lower is better)
Translates to: GGRGSHRHHGLPLAGGTWGQVPF*LDAWRV
Trigger: GACTCTCCAGGCATCCAAGCAAAATGGCACCTGGCC...CCAGGTTCCCCCAGCAAGCGGGAGCCCGTGGTGGCGGTGGCTGCCCCGGCCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000344849.4
CDS-3UTR GCA 90 bp GCTGCTGCTCTCCGAGGAGGCCGGGGCAGCCACCGCCACCACGGGCTCCCGCTTCGAGGCCTTTGCTTGTaGAACCAGACAGGTCAGGGC +
Preference number: 4 (lower is better)
Translates to: AAALRGGRGSHRHHGLPLRGLCL*NQTGQG
Trigger: GCCCTGACCTGTCTGGTTGCACAAGCAAAGGCCTCG...AAGCGGGAGCCCGTGGTGGCGGTGGCTGCCCCGGCCTCCTCGGAGAGCAGCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344849.4
CDS-3UTR GCA 90 bp GGAAGGGTAGGCGCGGAGAGCAGGCTCCATTCTGGGTCGAGTGGAGGACTGGCTTCCCCCTCTGCTGGCTaGCCGACCGGCAGAGGGGGC +
Preference number: 4 (lower is better)
Translates to: GRVGAESRLHSGSSGGLASPSAG*PTGRGG
Trigger: GCCCCCTCTGCCGGTCGGGCAGCCAGCAGAGGGGGA...AGCCAGTCCTCCACTCGACCCAGAATGGAGCCTGCTCTCCGCGCCTACCCTTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp GCCACCACGGGCTCCCGCTTGCTGGGGGAACCTGGGAGCGGGAGCGGGGGCAGGGGTCTTGGGGAAGGATaGCAGCTCTGTGGTGTTGAC +
Preference number: 4 (lower is better)
Translates to: ATTGSRLLGEPGSGSGGRGLGEG*QLCGVD
Trigger: GTCAACACCACAGAGCTGCCATCCTTCCCCAAGACC...CCTGCCCCCGCTCCCGCTCCCAGGTTCCCCCAGCAAGCGGGAGCCCGTGGTGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000344849.4
CDS-3UTR GCA 90 bp CCAGGGCCCCTCAATCCCTCAGAGGCTTCACTGGGCTCCCCCGGGTGGATGGAGGGGCTGGGCTGGAGTTaGTGTCCGAAGGATGGGCGG +
Preference number: 4 (lower is better)
Translates to: PGPLNPSEASLGSPGWMEGLGWS*CPKDGR
Trigger: CCGCCCATCCTTCGGACAGCAACTCCAGCCCAGCCC...CTCCATCCACCCGGGGGAGCCCAGTGAAGCCTCTGAGGGATTGAGGGGCCCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000344849.4
CDS-3UTR GCA 90 bp GGCAGAGGGGGCTCCATGTGGCAGGAGCTAGGCTCCCAACGCCCACTGTTCTTGGCGTGCCGCGGTCCATaGTGTCCACGTGGGGGCCTG +
Preference number: 4 (lower is better)
Translates to: GRGGSMWQELGSQRPLFLACRGP*CPRGGL
Trigger: CAGGCCCCCACGTGGACAGCATGGACCGCGGCACGC...CAAGAACAGTGGGCGTTGGGAGCCTAGCTCCTGCCACATGGAGCCCCCTCTGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000344849.4
ENST00000373203.9
CDS-3UTR GCA 90 bp GGAAGGGTAGGCGCGGAGAGCAGGCTCCATTCTGGGTCGAGTGGAGGACTGGCTGCCGCCACTCGAGCGTaGGGCCCATGTCCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: GRVGAESRLHSGSSGGLAAATRA*GPCPGW
Trigger: CCAGCCAGGACATGGGCCGCACGCTCGAGTGGCGGC...AGCCAGTCCTCCACTCGACCCAGAATGGAGCCTGCTCTCCGCGCCTACCCTTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR GCA 90 bp AGTTCAGGTGTGGAGGCCGCAGGGATAGATCCAGGTGGCTCTGGGCTGGGCCCTCCACGGGCTCCCGCTTaGTGGGGGAACGCGTGTGCG +
Preference number: 4 (lower is better)
Translates to: SSGVEAAGIDPGGSGLGPPRAPA*WGNACA
Trigger: CGCACACGCGTTCCCCCAGCAAGCGGGAGCCCGTGG...AGGGCCCAGCCCAGAGCCACCTGGATCTATCCCTGCGGCCTCCACACCTGAACT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp GGGCTCCATGTGGCAGGAGCTAGGCTCCCAACGCCCACTGTTCTTGCCACCCTCCCTGCTCCAGCCTTCTaGGGTGGCGGCCGAGGGGTC +
Preference number: 4 (lower is better)
Translates to: GLHVAGARLPTPTVLATLPAPAF*GGGRGV
Trigger: GACCCCTCGGCCGCCACCCCAGAAGGCTGGAGCAGG...GAGGGTGGCAAGAACAGTGGGCGTTGGGAGCCTAGCTCCTGCCACATGGAGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344849.4
ENST00000373203.9
CDS-3UTR CCA 90 bp GGAAGGGTAGGCGCGGAGAGCAGGCTCCATTCTGGGTCGAGTGGAGGACTGGCTGCCCCGGACCAAGGCTaGAGTACGCGGCCGCCACTC +
Preference number: 4 (lower is better)
Translates to: GRVGAESRLHSGSSGGLAAPDQG*STRPPL
Trigger: GAGTGGCGGCCGCGTACTCCAGCCTTGGTCCGGGGC...AGCCAGTCCTCCACTCGACCCAGAATGGAGCCTGCTCTCCGCGCCTACCCTTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp GGGGCAGCCACCGCCACCACGGGCTCCCGCTTGCTGGGGGAACCTGGGAGCGGGGCCTTGAGGTGTGTCTaGGAGCTTGAAGCCACGAAT +
Preference number: 4 (lower is better)
Translates to: GAATATTGSRLLGEPGSGALRCV*ELEATN
Trigger: ATTCGTGGCTTCAAGCTCCCAGACACACCTCAAGGC...CCCGCTCCCAGGTTCCCCCAGCAAGCGGGAGCCCGTGGTGGCGGTGGCTGCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000344849.4
CDS-3UTR CCA 90 bp GCTGCTGCTCTCCGAGGAGGCCGGGGCAGCCACCGCCACCACGGGCTCCCGCTTGAAGTGAGACAATGCTaGCCAGCGGTAGCTCCACGA +
Preference number: 4 (lower is better)
Translates to: AAALRGGRGSHRHHGLPLEVRQC*PAVAPR
Trigger: TCGTGGAGCTACCGCTGGCCAGCATTGTCTCACTTC...AAGCGGGAGCCCGTGGTGGCGGTGGCTGCCCCGGCCTCCTCGGAGAGCAGCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344849.4
CDS-3UTR CCA 90 bp TCCATGTGGCAGGAGCTAGGCTCCCAACGCCCACTGTTCTTGCCACCCTCTGGGCTGGGCTCCCCCGGGTaGATGGAGGGGCCCGGCATG +
Preference number: 4 (lower is better)
Translates to: SMWQELGSQRPLFLPPSGLGSPG*MEGPGM
Trigger: CATGCCGGGCCCCTCCATCCACCCGGGGGAGCCCAG...CCCAGAGGGTGGCAAGAACAGTGGGCGTTGGGAGCCTAGCTCCTGCCACATGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344849.4
CDS-3UTR CCA 90 bp GCCACCACGGGCTCCCGCTTGCTGGGGGAACCTGGGAGCGGGAGCGGGGGCAGGTTGGCCTGGCTGGGCTaGCCTGAATCTGTTTCAAGT +
Preference number: 4 (lower is better)
Translates to: ATTGSRLLGEPGSGSGGRLAWLG*PESVSS
Trigger: ACTTGAAACAGATTCAGGCCAGCCCAGCCAGGCCAA...CCTGCCCCCGCTCCCGCTCCCAGGTTCCCCCAGCAAGCGGGAGCCCGTGGTGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000344849.4
CDS-3UTR CCA 90 bp CCAGGGCCCCTCAATCCCTCAGAGGCTTCACTGGGCTCCCCCGGGTGGATGGAGTCTGGGCTCCCAGGCTaGGCTCCGCTAGGCTCCTGT +
Preference number: 4 (lower is better)
Translates to: PGPLNPSEASLGSPGWMESGLPG*APLGSC
Trigger: ACAGGAGCCTAGCGGAGCCCAGCCTGGGAGCCCAGA...CTCCATCCACCCGGGGGAGCCCAGTGAAGCCTCTGAGGGATTGAGGGGCCCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344849.4
CDS-3UTR CCA 90 bp GGTAGGCGCGGAGAGCAGGCTCCATTCTGGGTCGAGTGGAGGACTGGCTCCCAGCTACTCCCCCTCTGCTaGCTGCCCGACCGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: GRRGEQAPFWVEWRTGSQLLPLC*LPDRQR
Trigger: CCTCTGCCGGTCGGGCAGCCAGCAGAGGGGGAGTAG...CTGGGAGCCAGTCCTCCACTCGACCCAGAATGGAGCCTGCTCTCCGCGCCTACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR TCA 90 bp GAGTGGAGGACTGGCTCCCAGGGTGAGTTCACACCAGTGCTCCCAGCTGGCGGCGGGGACCCTGCAGGATaGGGACGGCATCGAGATCCC +
Preference number: 4 (lower is better)
Translates to: EWRTGSQGEFTPVLPAGGGDPAG*GRHRDP
Trigger: GGGATCTCGATGCCGTCCTCATCCTGCAGGGTCCCC...GCCGCCAGCTGGGAGCACTGGTGTGAACTCACCCTGGGAGCCAGTCCTCCACTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR TCA 90 bp CTGTTCTTGCCACCCTCTGGGCTCCCAGGCTGGGCTCCGCTAGGCTCCTGTCTCCTGGATCGGTGCGGGTaGGGTCTGCAGCCTACCACC +
Preference number: 4 (lower is better)
Translates to: LFLPPSGLPGWAPLGSCLLDRCG*GLQPTT
Trigger: GGTGGTAGGCTGCAGACCTCACCCGCACCGATCCAG...GAGACAGGAGCCTAGCGGAGCCCAGCCTGGGAGCCCAGAGGGTGGCAAGAACAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR TCA 90 bp AGGGAGGCGGGAAGGGTAGGCGCGGAGAGCAGGCTCCATTCTGGGTCGAGTGGACTGGATCGGTGCGGGTaGGGTCTGCAGCCTACCACC +
Preference number: 4 (lower is better)
Translates to: REAGRVGAESRLHSGSSGLDRCG*GLQPTT
Trigger: GGTGGTAGGCTGCAGACCTCACCCGCACCGATCCAG...TCCACTCGACCCAGAATGGAGCCTGCTCTCCGCGCCTACCCTTCCCGCCTCCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR TCA 90 bp GAGTGGAGGACTGGCTCCCAGGGTGAGTTCACACCAGTGCTCCCAGCTGGCGGCAGTGGAGGAGGAAGCTaGAGCGCGGGTCACCCTCGG +
Preference number: 4 (lower is better)
Translates to: EWRTGSQGEFTPVLPAGGSGGGS*SAGHPR
Trigger: CCGAGGGTGACCCGCGCTTCAGCTTCCTCCTCCACT...GCCGCCAGCTGGGAGCACTGGTGTGAACTCACCCTGGGAGCCAGTCCTCCACTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR GCA 90 bp GAGTGGAGGACTGGCTCCCAGGGTGAGTTCACACCAGTGCTCCCAGCTGGCGGCCCACGTGGGGGCCTGTaGGCTGGGCCTTATCCTGTG +
Preference number: 4 (lower is better)
Translates to: EWRTGSQGEFTPVLPAGGPRGGL*AGPYPV
Trigger: CACAGGATAAGGCCCAGCGCACAGGCCCCCACGTGG...GCCGCCAGCTGGGAGCACTGGTGTGAACTCACCCTGGGAGCCAGTCCTCCACTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344849.4
ENST00000373203.9
CDS-3UTR GCA 90 bp GGTAGGCGCGGAGAGCAGGCTCCATTCTGGGTCGAGTGGAGGACTGGCTCCCAGCAGCCAGAGGGAGCGTaGCGCGGTCCATGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: GRRGEQAPFWVEWRTGSQQPEGA*RGPCCP
Trigger: TGGACAGCATGGACCGCGGCACGCTCCCTCTGGCTG...CTGGGAGCCAGTCCTCCACTCGACCCAGAATGGAGCCTGCTCTCCGCGCCTACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344849.4
ENST00000373203.9
CDS-3UTR GCA 90 bp ACTGTTCTTGCCACCCTCTGGGCTCCCAGGCTGGGCTCCGCTAGGCTCCTGTCTGCAGGCTCACACAGTTaGCCTTGGCCGCCCGGCCCT +
Preference number: 4 (lower is better)
Translates to: TVLATLWAPRLGSARLLSAGSHS*PWPPGP
Trigger: AGGGCCGGGCGGCCAAGGGCAACTGTGTGAGCCTGC...AGACAGGAGCCTAGCGGAGCCCAGCCTGGGAGCCCAGAGGGTGGCAAGAACAGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR GCA 90 bp AGTTCAGGTGTGGAGGCCGCAGGGATAGATCCAGGTGGCTCTGGGCTGGGCCCTGCAGGCTCACACAGTTaGCCTTGGCCGCCCGGCCCT +
Preference number: 4 (lower is better)
Translates to: SSGVEAAGIDPGGSGLGPAGSHS*PWPPGP
Trigger: AGGGCCGGGCGGCCAAGGGCAACTGTGTGAGCCTGC...AGGGCCCAGCCCAGAGCCACCTGGATCTATCCCTGCGGCCTCCACACCTGAACT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR GCA 90 bp GGAGAGCAGGCTCCATTCTGGGTCGAGTGGAGGACTGGCTCCCAGGGTGAGTTCCCACGGGCTCCCGCTTaGTGGGGGAACCTGGGAGCG +
Preference number: 4 (lower is better)
Translates to: GEQAPFWVEWRTGSQGEFPRAPA*WGNLGA
Trigger: CGCTCCCAGGTTCCCCCAGCAAGCGGGAGCCCGTGG...GAACTCACCCTGGGAGCCAGTCCTCCACTCGACCCAGAATGGAGCCTGCTCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344849.4
CDS-3UTR GCA 90 bp GAGTGGAGGACTGGCTCCCAGGGTGAGTTCACACCAGTGCTCCCAGCTGGCGGCTGTGGTTGGTGCTGCTaGTCTCCGAGGAGGCCGGGG +
Preference number: 4 (lower is better)
Translates to: EWRTGSQGEFTPVLPAGGCGWCC*SPRRPG
Trigger: CCCCGGCCTCCTCGGAGAGCAGCAGCACCAACCACA...GCCGCCAGCTGGGAGCACTGGTGTGAACTCACCCTGGGAGCCAGTCCTCCACTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR GCA 90 bp CTGTTCTTGCCACCCTCTGGGCTCCCAGGCTGGGCTCCGCTAGGCTCCTGTCTCCTCCCAGCTGGCGGCTaGTCAGTCTCTCCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: LFLPPSGLPGWAPLGSCLLPAGG*SVSPAG
Trigger: CCCAGCAGGAGAGACTGAGCAGCCGCCAGCTGGGAG...GAGACAGGAGCCTAGCGGAGCCCAGCCTGGGAGCCCAGAGGGTGGCAAGAACAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR GCA 90 bp CTGTTCTTGCCACCCTCTGGGCTCCCAGGCTGGGCTCCGCTAGGCTCCTGTCTCTTCCCAGCGGGGAGGTaGTGTTGGCCTGGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: LFLPPSGLPGWAPLGSCLFPAGR*CWPGWA
Trigger: AGCCCAGCCAGGCCAACAGCACCTCCCCGCTGGGAA...GAGACAGGAGCCTAGCGGAGCCCAGCCTGGGAGCCCAGAGGGTGGCAAGAACAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR GCA 90 bp CCAGGCTGGGCTCCGCTAGGCTCCTGTCTCCCCTGCCAGTTAGTTAGGCAAGTTTCCCCCTCTGCTGGCTaGCCGACCGGCAGAGGGGGC +
Preference number: 4 (lower is better)
Translates to: PGWAPLGSCLPCQLVRQVSPSAG*PTGRGG
Trigger: GCCCCCTCTGCCGGTCGGGCAGCCAGCAGAGGGGGA...AACTTGCCTAACTAACTGGCAGGGGAGACAGGAGCCTAGCGGAGCCCAGCCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR GCA 90 bp GGCAGAGGGGGCTCCATGTGGCAGGAGCTAGGCTCCCAACGCCCACTGTTCTTGTGGCTACTCCCCCTCTaGTGGCTGCCCGACCGGCAG +
Preference number: 4 (lower is better)
Translates to: GRGGSMWQELGSQRPLFLWLLPL*WLPDRQ
Trigger: CTGCCGGTCGGGCAGCCAGCAGAGGGGGAGTAGCCA...CAAGAACAGTGGGCGTTGGGAGCCTAGCTCCTGCCACATGGAGCCCCCTCTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp GGTAGGCGCGGAGAGCAGGCTCCATTCTGGGTCGAGTGGAGGACTGGCTCCCAGGCGGGGAGGGGGTGCTaGGCTCCAATGGATGGCAGT +
Preference number: 4 (lower is better)
Translates to: GRRGEQAPFWVEWRTGSQAGRGC*APMDGS
Trigger: ACTGCCATCCATTGGAGCCCAGCACCCCCTCCCCGC...CTGGGAGCCAGTCCTCCACTCGACCCAGAATGGAGCCTGCTCTCCGCGCCTACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344849.4
ENST00000373203.9
CDS-3UTR CCA 90 bp CTGTTCTTGCCACCCTCTGGGCTCCCAGGCTGGGCTCCGCTAGGCTCCTGTCTCGCGGGGAGGGGGTGCTaGGCTCCAATGGATGGCAGT +
Preference number: 4 (lower is better)
Translates to: LFLPPSGLPGWAPLGSCLAGRGC*APMDGS
Trigger: ACTGCCATCCATTGGAGCCCAGCACCCCCTCCCCGC...GAGACAGGAGCCTAGCGGAGCCCAGCCTGGGAGCCCAGAGGGTGGCAAGAACAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344849.4
ENST00000373203.9
CDS-3UTR CCA 90 bp GGTAGGCGCGGAGAGCAGGCTCCATTCTGGGTCGAGTGGAGGACTGGCTCCCAGTTGCTGTCCGAAGGATaGGCGGGGAGGGGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: GRRGEQAPFWVEWRTGSQLLSEG*AGRGCW
Trigger: CCAGCACCCCCTCCCCGCCCATCCTTCGGACAGCAA...CTGGGAGCCAGTCCTCCACTCGACCCAGAATGGAGCCTGCTCTCCGCGCCTACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344849.4
ENST00000373203.9
CDS-3UTR CCA 90 bp GAGTGGAGGACTGGCTCCCAGGGTGAGTTCACACCAGTGCTCCCAGCTGGCGGCACAGGGACGCGGGGCTaGGCTGGAGTTGCTGTCCGA +
Preference number: 4 (lower is better)
Translates to: EWRTGSQGEFTPVLPAGGTGTRG*AGVAVR
Trigger: TCGGACAGCAACTCCAGCCCAGCCCCGCGTCCCTGT...GCCGCCAGCTGGGAGCACTGGTGTGAACTCACCCTGGGAGCCAGTCCTCCACTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344849.4
ENST00000373203.9
CDS-3UTR CCA 90 bp CTGTTCTTGCCACCCTCTGGGCTCCCAGGCTGGGCTCCGCTAGGCTCCTGTCTCTTGGCCGCCCGGCCCTaGATGAGTTCCACGGTGCCT +
Preference number: 4 (lower is better)
Translates to: LFLPPSGLPGWAPLGSCLLAARP*MSSTVP
Trigger: AGGCACCGTGGAACTCATCCAGGGCCGGGCGGCCAA...GAGACAGGAGCCTAGCGGAGCCCAGCCTGGGAGCCCAGAGGGTGGCAAGAACAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp GAGTGGAGGACTGGCTCCCAGGGTGAGTTCACACCAGTGCTCCCAGCTGGCGGCCCTCAGAGGCTTCACTaGGCTCCCCCGGGTGGATGG +
Preference number: 4 (lower is better)
Translates to: EWRTGSQGEFTPVLPAGGPQRLH*APPGGW
Trigger: CCATCCACCCGGGGGAGCCCAGTGAAGCCTCTGAGG...GCCGCCAGCTGGGAGCACTGGTGTGAACTCACCCTGGGAGCCAGTCCTCCACTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344849.4
CDS-3UTR TCA 90 bp AGGGAGGCGGGAAGGGTAGGCGCGGAGAGCAGGCTCCATTCTGGGTCGAGTGGACAAGACTTGTGGGGCTaGGGCTGCAGCTGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: REAGRVGAESRLHSGSSGQDLWG*GCSWPA
Trigger: TGCTGGCCAGCTGCAGCCTCAGCCCCACAAGTCTTG...TCCACTCGACCCAGAATGGAGCCTGCTCTCCGCGCCTACCCTTCCCGCCTCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344849.4
ENST00000373203.9
CDS-3UTR TCA 90 bp CTGTTCTTGCCACCCTCTGGGCTCCCAGGCTGGGCTCCGCTAGGCTCCTGTCTCAGTCAGCTCCAGCTGTaGCGGGCCCGTTGGGAACTC +
Preference number: 4 (lower is better)
Translates to: LFLPPSGLPGWAPLGSCLSQLQL*RARWEL
Trigger: GAGTTCCCAACGGGCCCGTCACAGCTGGAGCTGACT...GAGACAGGAGCCTAGCGGAGCCCAGCCTGGGAGCCCAGAGGGTGGCAAGAACAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR TCA 90 bp GGTAGGCGCGGAGAGCAGGCTCCATTCTGGGTCGAGTGGAGGACTGGCTCCCAGCCACAATGCTGGCATTaGGCATCCGGGCCTCCCCCA +
Preference number: 4 (lower is better)
Translates to: GRRGEQAPFWVEWRTGSQPQCWH*ASGPPP
Trigger: TGGGGGAGGCCCGGATGCTCAATGCCAGCATTGTGG...CTGGGAGCCAGTCCTCCACTCGACCCAGAATGGAGCCTGCTCTCCGCGCCTACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR TCA 90 bp GGGCTCCATGTGGCAGGAGCTAGGCTCCCAACGCCCACTGTTCTTGCCACCCTCCTGGATCGGTGCGGGTaGGGTCTGCAGCCTACCACC +
Preference number: 4 (lower is better)
Translates to: GLHVAGARLPTPTVLATLLDRCG*GLQPTT
Trigger: GGTGGTAGGCTGCAGACCTCACCCGCACCGATCCAG...GAGGGTGGCAAGAACAGTGGGCGTTGGGAGCCTAGCTCCTGCCACATGGAGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR TCA 90 bp AGGGAGGCGGGAAGGGTAGGCGCGGAGAGCAGGCTCCATTCTGGGTCGAGTGGAGGAGGAAGTGTGGGCTaGGGTAGAGGCCCAGCTGGA +
Preference number: 4 (lower is better)
Translates to: REAGRVGAESRLHSGSSGGGSVG*GRGPAG
Trigger: TCCAGCTGGGCCTCTACCTCAGCCCACACTTCCTCC...TCCACTCGACCCAGAATGGAGCCTGCTCTCCGCGCCTACCCTTCCCGCCTCCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR TCA 90 bp GGCAGAGGGGGCTCCATGTGGCAGGAGCTAGGCTCCCAACGCCCACTGTTCTTGAGTGGAGGAGGAAGCTaGAGCGCGGGTCACCCTCGG +
Preference number: 4 (lower is better)
Translates to: GRGGSMWQELGSQRPLFLSGGGS*SAGHPR
Trigger: CCGAGGGTGACCCGCGCTTCAGCTTCCTCCTCCACT...CAAGAACAGTGGGCGTTGGGAGCCTAGCTCCTGCCACATGGAGCCCCCTCTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR TCA 90 bp GGTAGGCGCGGAGAGCAGGCTCCATTCTGGGTCGAGTGGAGGACTGGCTCCCAGGGGCTACCGTGCAGCTaGGGGTGCCGGTTTTGGGTA +
Preference number: 4 (lower is better)
Translates to: GRRGEQAPFWVEWRTGSQGLPCS*GCRFWV
Trigger: TACCCAAAACCGGCACCCTCAGCTGCACGGTAGCCC...CTGGGAGCCAGTCCTCCACTCGACCCAGAATGGAGCCTGCTCTCCGCGCCTACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR TCA 90 bp GGCAGAGGGGGCTCCATGTGGCAGGAGCTAGGCTCCCAACGCCCACTGTTCTTGGGAAGGCACCAAAGGTaGTGCCCAGCACGGCGGGCA +
Preference number: 4 (lower is better)
Translates to: GRGGSMWQELGSQRPLFLGRHQR*CPARRA
Trigger: TGCCCGCCGTGCTGGGCATCACCTTTGGTGCCTTCC...CAAGAACAGTGGGCGTTGGGAGCCTAGCTCCTGCCACATGGAGCCCCCTCTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR TCA 90 bp CTGTTCTTGCCACCCTCTGGGCTCCCAGGCTGGGCTCCGCTAGGCTCCTGTCTCGACTGGCTCCCAGGGTaGGTTCACACCAGTGCTCCC +
Preference number: 4 (lower is better)
Translates to: LFLPPSGLPGWAPLGSCLDWLPG*VHTSAP
Trigger: GGGAGCACTGGTGTGAACTCACCCTGGGAGCCAGTC...GAGACAGGAGCCTAGCGGAGCCCAGCCTGGGAGCCCAGAGGGTGGCAAGAACAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR GCA 90 bp GGGCTCCATGTGGCAGGAGCTAGGCTCCCAACGCCCACTGTTCTTGCCACCCTCCAGCCAGAGGGAGCGTaGCGCGGTCCATGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: GLHVAGARLPTPTVLATLQPEGA*RGPCCP
Trigger: TGGACAGCATGGACCGCGGCACGCTCCCTCTGGCTG...GAGGGTGGCAAGAACAGTGGGCGTTGGGAGCCTAGCTCCTGCCACATGGAGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000344849.4
ENST00000373203.9
CDS-3UTR GCA 90 bp AGTTCAGGTGTGGAGGCCGCAGGGATAGATCCAGGTGGCTCTGGGCTGGGCCCTAGGACCCTCAGGATGTaGGCCTCCTTGTGGCCGGCC +
Preference number: 4 (lower is better)
Translates to: SSGVEAAGIDPGGSGLGPRTLRM*ASLWPA
Trigger: GGCCGGCCACAAGGAGGCGCACATCCTGAGGGTCCT...AGGGCCCAGCCCAGAGCCACCTGGATCTATCCCTGCGGCCTCCACACCTGAACT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR GCA 90 bp GGAAGGGTAGGCGCGGAGAGCAGGCTCCATTCTGGGTCGAGTGGAGGACTGGCTAGGACCCTCAGGATGTaGGCCTCCTTGTGGCCGGCC +
Preference number: 4 (lower is better)
Translates to: GRVGAESRLHSGSSGGLARTLRM*ASLWPA
Trigger: GGCCGGCCACAAGGAGGCGCACATCCTGAGGGTCCT...AGCCAGTCCTCCACTCGACCCAGAATGGAGCCTGCTCTCCGCGCCTACCCTTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR GCA 90 bp AGTTCAGGTGTGGAGGCCGCAGGGATAGATCCAGGTGGCTCTGGGCTGGGCCCTGGTGCGGGTGAGGTCTaGAGCCTACCACCGCAGCTG +
Preference number: 4 (lower is better)
Translates to: SSGVEAAGIDPGGSGLGPGAGEV*SLPPQL
Trigger: CAGCTGCGGTGGTAGGCTGCAGACCTCACCCGCACC...AGGGCCCAGCCCAGAGCCACCTGGATCTATCCCTGCGGCCTCCACACCTGAACT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR GCA 90 bp AGGGAGGCGGGAAGGGTAGGCGCGGAGAGCAGGCTCCATTCTGGGTCGAGTGGATGCTGTGGTTGGTGCTaGTGCTCTCCGAGGAGGCCG +
Preference number: 4 (lower is better)
Translates to: REAGRVGAESRLHSGSSGCCGWC*CSPRRP
Trigger: CGGCCTCCTCGGAGAGCAGCAGCACCAACCACAGCA...TCCACTCGACCCAGAATGGAGCCTGCTCTCCGCGCCTACCCTTCCCGCCTCCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR GCA 90 bp GGGCTCCATGTGGCAGGAGCTAGGCTCCCAACGCCCACTGTTCTTGCCACCCTCGGGGCTATGCCATGCTaGTGGTGGAGCAGGGGGTGC +
Preference number: 4 (lower is better)
Translates to: GLHVAGARLPTPTVLATLGAMPC*WWSRGC
Trigger: GCACCCCCTGCTCCACCAGCAGCATGGCATAGCCCC...GAGGGTGGCAAGAACAGTGGGCGTTGGGAGCCTAGCTCCTGCCACATGGAGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR GCA 90 bp GGAGGCCGGGGCAGCCACCGCCACCACGGGCTCCCGCTTGCTGGGGGAACCTGGAGCTCAGTTCACCAGTaGTGGATCCAGGTTCAAATG +
Preference number: 4 (lower is better)
Translates to: GGRGSHRHHGLPLAGGTWSSVHQ*WIQVQM
Trigger: CATTTGAACCTGGATCCAGCACTGGTGAACTGAGCT...CCAGGTTCCCCCAGCAAGCGGGAGCCCGTGGTGGCGGTGGCTGCCCCGGCCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344849.4
CDS-3UTR GCA 90 bp ACTGTTCTTGCCACCCTCTGGGCTCCCAGGCTGGGCTCCGCTAGGCTCCTGTCTTTCCCAGCGGGGAGGTaGTGTTGGCCTGGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: TVLATLWAPRLGSARLLSFPAGR*CWPGWA
Trigger: AGCCCAGCCAGGCCAACAGCACCTCCCCGCTGGGAA...AGACAGGAGCCTAGCGGAGCCCAGCCTGGGAGCCCAGAGGGTGGCAAGAACAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR GCA 90 bp TGGCCTGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCCTGCCCAGCTTCCCCCTCTGCTGGCTaGCCGACCGGCAGAGGGGGC +
Preference number: 4 (lower is better)
Translates to: WPGWAGLNLFQVLPSCPASPSAG*PTGRGG
Trigger: GCCCCCTCTGCCGGTCGGGCAGCCAGCAGAGGGGGA...AGCTGGGCAGGAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCAGGCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR GCA 90 bp TCCATGTGGCAGGAGCTAGGCTCCCAACGCCCACTGTTCTTGCCACCCTCTGGGTGGCTACTCCCCCTCTaGTGGCTGCCCGACCGGCAG +
Preference number: 4 (lower is better)
Translates to: SMWQELGSQRPLFLPPSGWLLPL*WLPDRQ
Trigger: CTGCCGGTCGGGCAGCCAGCAGAGGGGGAGTAGCCA...CCCAGAGGGTGGCAAGAACAGTGGGCGTTGGGAGCCTAGCTCCTGCCACATGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp CCAGGCTGGGCTCCGCTAGGCTCCTGTCTCCCCTGCCAGTTAGTTAGGCAAGTTGCCCCGGACCAAGGCTaGAGTACGCGGCCGCCACTC +
Preference number: 4 (lower is better)
Translates to: PGWAPLGSCLPCQLVRQVAPDQG*STRPPL
Trigger: GAGTGGCGGCCGCGTACTCCAGCCTTGGTCCGGGGC...AACTTGCCTAACTAACTGGCAGGGGAGACAGGAGCCTAGCGGAGCCCAGCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp AGTTCAGGTGTGGAGGCCGCAGGGATAGATCCAGGTGGCTCTGGGCTGGGCCCTGCCACGCCTTCCAAGTaGCAGCCCCGGACCAAGGCT +
Preference number: 4 (lower is better)
Translates to: SSGVEAAGIDPGGSGLGPATPSK*QPRTKA
Trigger: AGCCTTGGTCCGGGGCTGCCACTTGGAAGGCGTGGC...AGGGCCCAGCCCAGAGCCACCTGGATCTATCCCTGCGGCCTCCACACCTGAACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp GAGTGGAGGACTGGCTCCCAGGGTGAGTTCACACCAGTGCTCCCAGCTGGCGGCCCTCTGCCTCACAGCTaGGGTCCCAGAAGGTCAGGC +
Preference number: 4 (lower is better)
Translates to: EWRTGSQGEFTPVLPAGGPLPHS*GPRRSG
Trigger: GCCTGACCTTCTGGGACCCCAGCTGTGAGGCAGAGG...GCCGCCAGCTGGGAGCACTGGTGTGAACTCACCCTGGGAGCCAGTCCTCCACTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp CTGTTCTTGCCACCCTCTGGGCTCCCAGGCTGGGCTCCGCTAGGCTCCTGTCTCGGCCTGGAGGAAGTGTaGGCTGAGGTAGAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: LFLPPSGLPGWAPLGSCLGLEEV*AEVEAQ
Trigger: CTGGGCCTCTACCTCAGCCCACACTTCCTCCAGGCC...GAGACAGGAGCCTAGCGGAGCCCAGCCTGGGAGCCCAGAGGGTGGCAAGAACAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp GGTAGGCGCGGAGAGCAGGCTCCATTCTGGGTCGAGTGGAGGACTGGCTCCCAGACCAGTGCTCCCAGCTaGCGGCTGCTCAGTCTCTCC +
Preference number: 4 (lower is better)
Translates to: GRRGEQAPFWVEWRTGSQTSAPS*RLLSLS
Trigger: GGAGAGACTGAGCAGCCGCCAGCTGGGAGCACTGGT...CTGGGAGCCAGTCCTCCACTCGACCCAGAATGGAGCCTGCTCTCCGCGCCTACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp GGAAGGGTAGGCGCGGAGAGCAGGCTCCATTCTGGGTCGAGTGGAGGACTGGCTTCTGGGCTCCCAGGCTaGGCTCCGCTAGGCTCCTGT +
Preference number: 4 (lower is better)
Translates to: GRVGAESRLHSGSSGGLASGLPG*APLGSC
Trigger: ACAGGAGCCTAGCGGAGCCCAGCCTGGGAGCCCAGA...AGCCAGTCCTCCACTCGACCCAGAATGGAGCCTGCTCTCCGCGCCTACCCTTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp TCCATGTGGCAGGAGCTAGGCTCCCAACGCCCACTGTTCTTGCCACCCTCTGGGCTACTCCCCCTCTGCTaGCTGCCCGACCGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: SMWQELGSQRPLFLPPSGLLPLC*LPDRQR
Trigger: CCTCTGCCGGTCGGGCAGCCAGCAGAGGGGGAGTAG...CCCAGAGGGTGGCAAGAACAGTGGGCGTTGGGAGCCTAGCTCCTGCCACATGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR TCA 90 bp GGAAGGGTAGGCGCGGAGAGCAGGCTCCATTCTGGGTCGAGTGGAGGACTGGCTCAAGACTTGTGGGGCTaGGGCTGCAGCTGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: GRVGAESRLHSGSSGGLAQDLWG*GCSWPA
Trigger: TGCTGGCCAGCTGCAGCCTCAGCCCCACAAGTCTTG...AGCCAGTCCTCCACTCGACCCAGAATGGAGCCTGCTCTCCGCGCCTACCCTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344849.4
ENST00000373203.9
CDS-3UTR TCA 90 bp GGAGAGCAGGCTCCATTCTGGGTCGAGTGGAGGACTGGCTCCCAGGGTGAGTTCATGGCATTGGGGGCCTaGGCCACGCAGCCCTTCGAG +
Preference number: 4 (lower is better)
Translates to: GEQAPFWVEWRTGSQGEFMALGA*ATQPFE
Trigger: CTCGAAGGGCTGCGTGGCTCAGGCCCCCAATGCCAT...GAACTCACCCTGGGAGCCAGTCCTCCACTCGACCCAGAATGGAGCCTGCTCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR TCA 90 bp GGCAGAGGGGGCTCCATGTGGCAGGAGCTAGGCTCCCAACGCCCACTGTTCTTGTGTGGTTGGCGTCGATaGGCCAGGACACGTAGGGGG +
Preference number: 4 (lower is better)
Translates to: GRGGSMWQELGSQRPLFLCGWRR*ARTRRG
Trigger: CCCCCTACGTGTCCTGGCTCATCGACGCCAACCACA...CAAGAACAGTGGGCGTTGGGAGCCTAGCTCCTGCCACATGGAGCCCCCTCTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR TCA 90 bp GGAAGGGTAGGCGCGGAGAGCAGGCTCCATTCTGGGTCGAGTGGAGGACTGGCTTGTGGTTGGCGTCGATaGGCCAGGACACGTAGGGGG +
Preference number: 4 (lower is better)
Translates to: GRVGAESRLHSGSSGGLACGWRR*ARTRRG
Trigger: CCCCCTACGTGTCCTGGCTCATCGACGCCAACCACA...AGCCAGTCCTCCACTCGACCCAGAATGGAGCCTGCTCTCCGCGCCTACCCTTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR TCA 90 bp GAGTGGAGGACTGGCTCCCAGGGTGAGTTCACACCAGTGCTCCCAGCTGGCGGCGCTGGAGGCATGAAGTaGGACAATGCTGGCCAGCGG +
Preference number: 4 (lower is better)
Translates to: EWRTGSQGEFTPVLPAGGAGGMK*DNAGQR
Trigger: CCGCTGGCCAGCATTGTCTCACTTCATGCCTCCAGC...GCCGCCAGCTGGGAGCACTGGTGTGAACTCACCCTGGGAGCCAGTCCTCCACTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR TCA 90 bp GGCAGAGGGGGCTCCATGTGGCAGGAGCTAGGCTCCCAACGCCCACTGTTCTTGGGAGGAAGTGTGGGCTaGGGTAGAGGCCCAGCTGGA +
Preference number: 4 (lower is better)
Translates to: GRGGSMWQELGSQRPLFLGGSVG*GRGPAG
Trigger: TCCAGCTGGGCCTCTACCTCAGCCCACACTTCCTCC...CAAGAACAGTGGGCGTTGGGAGCCTAGCTCCTGCCACATGGAGCCCCCTCTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR TCA 90 bp GGAAGGGTAGGCGCGGAGAGCAGGCTCCATTCTGGGTCGAGTGGAGGACTGGCTGGAGGAAGTGTGGGCTaGGGTAGAGGCCCAGCTGGA +
Preference number: 4 (lower is better)
Translates to: GRVGAESRLHSGSSGGLAGGSVG*GRGPAG
Trigger: TCCAGCTGGGCCTCTACCTCAGCCCACACTTCCTCC...AGCCAGTCCTCCACTCGACCCAGAATGGAGCCTGCTCTCCGCGCCTACCCTTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR TCA 90 bp TGGCCTGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCCTGCCCAGCTCCGCCCGGCCCTGGATaGGTTCCACGGTGCCTCCCT +
Preference number: 4 (lower is better)
Translates to: WPGWAGLNLFQVLPSCPAPPGPG*VPRCLP
Trigger: AGGGAGGCACCGTGGAACTCATCCAGGGCCGGGCGG...AGCTGGGCAGGAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCAGGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR GCA 90 bp GGCAGAGGGGGCTCCATGTGGCAGGAGCTAGGCTCCCAACGCCCACTGTTCTTGGGGGCCCCTCTCAGCTaGCCACTCAAGGATCTGGGT +
Preference number: 4 (lower is better)
Translates to: GRGGSMWQELGSQRPLFLGAPLS*PLKDLG
Trigger: ACCCAGATCCTTGAGTGGGCAGCTGAGAGGGGCCCC...CAAGAACAGTGGGCGTTGGGAGCCTAGCTCCTGCCACATGGAGCCCCCTCTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR GCA 90 bp CTGTTCTTGCCACCCTCTGGGCTCCCAGGCTGGGCTCCGCTAGGCTCCTGTCTCGGGGACACTCTGACCTaGACAAAGCTCTGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: LFLPPSGLPGWAPLGSCLGDTLT*TKLCCP
Trigger: GGGGCAGCAGAGCTTTGTGCAGGTCAGAGTGTCCCC...GAGACAGGAGCCTAGCGGAGCCCAGCCTGGGAGCCCAGAGGGTGGCAAGAACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR GCA 90 bp GAGTGGAGGACTGGCTCCCAGGGTGAGTTCACACCAGTGCTCCCAGCTGGCGGCGGGGACACTCTGACCTaGACAAAGCTCTGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: EWRTGSQGEFTPVLPAGGGDTLT*TKLCCP
Trigger: GGGGCAGCAGAGCTTTGTGCAGGTCAGAGTGTCCCC...GCCGCCAGCTGGGAGCACTGGTGTGAACTCACCCTGGGAGCCAGTCCTCCACTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR GCA 90 bp GGAGAGCAGGCTCCATTCTGGGTCGAGTGGAGGACTGGCTCCCAGGGTGAGTTCTGGTGGAGCAGGGGGTaGTCTGGGTGCTCCCGATGC +
Preference number: 4 (lower is better)
Translates to: GEQAPFWVEWRTGSQGEFWWSRG*SGCSRC
Trigger: GCATCGGGAGCACCCAGAGCACCCCCTGCTCCACCA...GAACTCACCCTGGGAGCCAGTCCTCCACTCGACCCAGAATGGAGCCTGCTCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR GCA 90 bp TCCATGTGGCAGGAGCTAGGCTCCCAACGCCCACTGTTCTTGCCACCCTCTGGGTGGTGGAGCAGGGGGTaGTCTGGGTGCTCCCGATGC +
Preference number: 4 (lower is better)
Translates to: SMWQELGSQRPLFLPPSGWWSRG*SGCSRC
Trigger: GCATCGGGAGCACCCAGAGCACCCCCTGCTCCACCA...CCCAGAGGGTGGCAAGAACAGTGGGCGTTGGGAGCCTAGCTCCTGCCACATGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR GCA 90 bp AGGGAGGCGGGAAGGGTAGGCGCGGAGAGCAGGCTCCATTCTGGGTCGAGTGGATTCCAAGCCAGTGGCTaGACTGGCAGCAGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: REAGRVGAESRLHSGSSGFQASG*TGSRPL
Trigger: CAGAGGCCTGCTGCCAGTGCAGCCACTGGCTTGGAA...TCCACTCGACCCAGAATGGAGCCTGCTCTCCGCGCCTACCCTTCCCGCCTCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR GCA 90 bp AGGGAGGCGGGAAGGGTAGGCGCGGAGAGCAGGCTCCATTCTGGGTCGAGTGGAAACGCCCACTGTTCTTaGCACCCTCTGGGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: REAGRVGAESRLHSGSSGNAHCS*HPLGSQ
Trigger: CTGGGAGCCCAGAGGGTGGCAAGAACAGTGGGCGTT...TCCACTCGACCCAGAATGGAGCCTGCTCTCCGCGCCTACCCTTCCCGCCTCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp AGTTCAGGTGTGGAGGCCGCAGGGATAGATCCAGGTGGCTCTGGGCTGGGCCCTGACGCGGGGCTGGGCTaGAGTTGCTGTCCGAAGGAT +
Preference number: 4 (lower is better)
Translates to: SSGVEAAGIDPGGSGLGPDAGLG*SCCPKD
Trigger: ATCCTTCGGACAGCAACTCCAGCCCAGCCCCGCGTC...AGGGCCCAGCCCAGAGCCACCTGGATCTATCCCTGCGGCCTCCACACCTGAACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344849.4
ENST00000373203.9
CDS-3UTR CCA 90 bp CAGGCTCCATTCTGGGTCGAGTGGAGGACTGGCTCCCAGGGTGAGTTCACACCATCCATGCTGTCCACGTaGGGGCCTGTGCGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: QAPFWVEWRTGSQGEFTPSMLST*GPVRWA
Trigger: GGCCCAGCGCACAGGCCCCCACGTGGACAGCATGGA...TGGTGTGAACTCACCCTGGGAGCCAGTCCTCCACTCGACCCAGAATGGAGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344849.4
ENST00000373203.9
CDS-3UTR CCA 90 bp AGGGAGGCGGGAAGGGTAGGCGCGGAGAGCAGGCTCCATTCTGGGTCGAGTGGACTTCAAGGATGGCATTaGGGGCCTGAGCCACGCAGC +
Preference number: 4 (lower is better)
Translates to: REAGRVGAESRLHSGSSGLQGWH*GPEPRS
Trigger: GCTGCGTGGCTCAGGCCCCCAATGCCATCCTTGAAG...TCCACTCGACCCAGAATGGAGCCTGCTCTCCGCGCCTACCCTTCCCGCCTCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp CTGTTCTTGCCACCCTCTGGGCTCCCAGGCTGGGCTCCGCTAGGCTCCTGTCTCGGCCCATGTCCTGGCTaGCTTCCAGCATGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: LFLPPSGLPGWAPLGSCLGPCPG*LPACRR
Trigger: CCTTCTGCATGCTGGAAGCCAGCCAGGACATGGGCC...GAGACAGGAGCCTAGCGGAGCCCAGCCTGGGAGCCCAGAGGGTGGCAAGAACAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp GAGTGGAGGACTGGCTCCCAGGGTGAGTTCACACCAGTGCTCCCAGCTGGCGGCTTGGGAGGAGTGGTCTaGATCGGTGCGGGTGAGGTC +
Preference number: 4 (lower is better)
Translates to: EWRTGSQGEFTPVLPAGGLGGVV*IGAGEV
Trigger: GACCTCACCCGCACCGATCCAGACCACTCCTCCCAA...GCCGCCAGCTGGGAGCACTGGTGTGAACTCACCCTGGGAGCCAGTCCTCCACTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp AGTTCAGGTGTGGAGGCCGCAGGGATAGATCCAGGTGGCTCTGGGCTGGGCCCTCCTCTGCCTCACAGCTaGGGTCCCAGAAGGTCAGGC +
Preference number: 4 (lower is better)
Translates to: SSGVEAAGIDPGGSGLGPPLPHS*GPRRSG
Trigger: GCCTGACCTTCTGGGACCCCAGCTGTGAGGCAGAGG...AGGGCCCAGCCCAGAGCCACCTGGATCTATCCCTGCGGCCTCCACACCTGAACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp GGCAGAGGGGGCTCCATGTGGCAGGAGCTAGGCTCCCAACGCCCACTGTTCTTGGGCCTGGAGGAAGTGTaGGCTGAGGTAGAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: GRGGSMWQELGSQRPLFLGLEEV*AEVEAQ
Trigger: CTGGGCCTCTACCTCAGCCCACACTTCCTCCAGGCC...CAAGAACAGTGGGCGTTGGGAGCCTAGCTCCTGCCACATGGAGCCCCCTCTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp CTGTTCTTGCCACCCTCTGGGCTCCCAGGCTGGGCTCCGCTAGGCTCCTGTCTCCCGGCTCGATGGTGTTaGAGGCCTGGAGGAAGTGTG +
Preference number: 4 (lower is better)
Translates to: LFLPPSGLPGWAPLGSCLPARWC*RPGGSV
Trigger: CACACTTCCTCCAGGCCTCCAACACCATCGAGCCGG...GAGACAGGAGCCTAGCGGAGCCCAGCCTGGGAGCCCAGAGGGTGGCAAGAACAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp GGTAGGCGCGGAGAGCAGGCTCCATTCTGGGTCGAGTGGAGGACTGGCTCCCAGCCGGCTCGATGGTGTTaGAGGCCTGGAGGAAGTGTG +
Preference number: 4 (lower is better)
Translates to: GRRGEQAPFWVEWRTGSQPARWC*RPGGSV
Trigger: CACACTTCCTCCAGGCCTCCAACACCATCGAGCCGG...CTGGGAGCCAGTCCTCCACTCGACCCAGAATGGAGCCTGCTCTCCGCGCCTACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp ACTGTTCTTGCCACCCTCTGGGCTCCCAGGCTGGGCTCCGCTAGGCTCCTGTCTCTTGAGACCCGGTCTTaGGACGCAGGGCTACCGTGC +
Preference number: 4 (lower is better)
Translates to: TVLATLWAPRLGSARLLSLETRS*DAGLPC
Trigger: GCACGGTAGCCCTGCGTCCCAAGACCGGGTCTCAAG...AGACAGGAGCCTAGCGGAGCCCAGCCTGGGAGCCCAGAGGGTGGCAAGAACAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp CCAGGCTGGGCTCCGCTAGGCTCCTGTCTCCCCTGCCAGTTAGTTAGGCAAGTTCGGAGGTCAGGGTCCTaGCCAGGGCCCCTCAATCCC +
Preference number: 4 (lower is better)
Translates to: PGWAPLGSCLPCQLVRQVRRSGS*PGPLNP
Trigger: GGGATTGAGGGGCCCTGGCCAGGACCCTGACCTCCG...AACTTGCCTAACTAACTGGCAGGGGAGACAGGAGCCTAGCGGAGCCCAGCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344849.4
CDS-3UTR CCA 90 bp ACTGTTCTTGCCACCCTCTGGGCTCCCAGGCTGGGCTCCGCTAGGCTCCTGTCTGGTGTTCCAAGCCAGTaGCTGCACTGGCAGCAGGCC +
Preference number: 4 (lower is better)
Translates to: TVLATLWAPRLGSARLLSGVPSQ*LHWQQA
Trigger: GGCCTGCTGCCAGTGCAGCCACTGGCTTGGAACACC...AGACAGGAGCCTAGCGGAGCCCAGCCTGGGAGCCCAGAGGGTGGCAAGAACAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp AGGGAGGCGGGAAGGGTAGGCGCGGAGAGCAGGCTCCATTCTGGGTCGAGTGGAGAGGTGCTGTTGGCCTaGCTGGGCTGGCCTGAATCT +
Preference number: 4 (lower is better)
Translates to: REAGRVGAESRLHSGSSGEVLLA*LGWPES
Trigger: AGATTCAGGCCAGCCCAGCCAGGCCAACAGCACCTC...TCCACTCGACCCAGAATGGAGCCTGCTCTCCGCGCCTACCCTTCCCGCCTCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp GAGTGGAGGACTGGCTCCCAGGGTGAGTTCACACCAGTGCTCCCAGCTGGCGGCAGGGATAGATCCAGGTaGCTCTGGGCTGGGCCCTCT +
Preference number: 4 (lower is better)
Translates to: EWRTGSQGEFTPVLPAGGRDRSR*LWAGPS
Trigger: AGAGGGCCCAGCCCAGAGCCACCTGGATCTATCCCT...GCCGCCAGCTGGGAGCACTGGTGTGAACTCACCCTGGGAGCCAGTCCTCCACTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp GAGTGGAGGACTGGCTCCCAGGGTGAGTTCACACCAGTGCTCCCAGCTGGCGGCAGAGGGGGCTCCATGTaGCAGGAGCTAGGCTCCCAA +
Preference number: 4 (lower is better)
Translates to: EWRTGSQGEFTPVLPAGGRGGSM*QELGSQ
Trigger: TTGGGAGCCTAGCTCCTGCCACATGGAGCCCCCTCT...GCCGCCAGCTGGGAGCACTGGTGTGAACTCACCCTGGGAGCCAGTCCTCCACTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp GGTAGGCGCGGAGAGCAGGCTCCATTCTGGGTCGAGTGGAGGACTGGCTCCCAGCCAGGACAAGCAGCTTaGCTACTCCCCCTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: GRRGEQAPFWVEWRTGSQPGQAA*LLPLCW
Trigger: CCAGCAGAGGGGGAGTAGCCAAGCTGCTTGTCCTGG...CTGGGAGCCAGTCCTCCACTCGACCCAGAATGGAGCCTGCTCTCCGCGCCTACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR TCA 90 bp CTGTTCTTGCCACCCTCTGGGCTCCCAGGCTGGGCTCCGCTAGGCTCCTGTCTCTCGGGGCCCACAGGCTaGAGGTCACAATGGACTGTT +
Preference number: 4 (lower is better)
Translates to: LFLPPSGLPGWAPLGSCLSGPTG*RSQWTV
Trigger: AACAGTCCATTGTGACCTTCAGCCTGTGGGCCCCGA...GAGACAGGAGCCTAGCGGAGCCCAGCCTGGGAGCCCAGAGGGTGGCAAGAACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR TCA 90 bp CAGGCTCCATTCTGGGTCGAGTGGAGGACTGGCTCCCAGGGTGAGTTCACACCAATGGCATTGGGGGCCTaGGCCACGCAGCCCTTCGAG +
Preference number: 4 (lower is better)
Translates to: QAPFWVEWRTGSQGEFTPMALGA*ATQPFE
Trigger: CTCGAAGGGCTGCGTGGCTCAGGCCCCCAATGCCAT...TGGTGTGAACTCACCCTGGGAGCCAGTCCTCCACTCGACCCAGAATGGAGCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR TCA 90 bp GAGTGGAGGACTGGCTCCCAGGGTGAGTTCACACCAGTGCTCCCAGCTGGCGGCGGGGCTCTTGGAAGGTaGCCAGGCTGGAATTGTAGG +
Preference number: 4 (lower is better)
Translates to: EWRTGSQGEFTPVLPAGGGALGR*PGWNCR
Trigger: CCTACAATTCCAGCCTGGTCACCTTCCAAGAGCCCC...GCCGCCAGCTGGGAGCACTGGTGTGAACTCACCCTGGGAGCCAGTCCTCCACTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR TCA 90 bp GGTAGGCGCGGAGAGCAGGCTCCATTCTGGGTCGAGTGGAGGACTGGCTCCCAGGGGGCTCTTGGAAGGTaGCCAGGCTGGAATTGTAGG +
Preference number: 4 (lower is better)
Translates to: GRRGEQAPFWVEWRTGSQGALGR*PGWNCR
Trigger: CCTACAATTCCAGCCTGGTCACCTTCCAAGAGCCCC...CTGGGAGCCAGTCCTCCACTCGACCCAGAATGGAGCCTGCTCTCCGCGCCTACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR TCA 90 bp GGAGAGCAGGCTCCATTCTGGGTCGAGTGGAGGACTGGCTCCCAGGGTGAGTTCCATGCAGAAGGACAGTaGCCCCTGGGCTTGGCCCAG +
Preference number: 4 (lower is better)
Translates to: GEQAPFWVEWRTGSQGEFHAEGQ*PLGLAQ
Trigger: CTGGGCCAAGCCCAGGGGTCACTGTCCTTCTGCATG...GAACTCACCCTGGGAGCCAGTCCTCCACTCGACCCAGAATGGAGCCTGCTCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR TCA 90 bp TCCATGTGGCAGGAGCTAGGCTCCCAACGCCCACTGTTCTTGCCACCCTCTGGGCATGCAGAAGGACAGTaGCCCCTGGGCTTGGCCCAG +
Preference number: 4 (lower is better)
Translates to: SMWQELGSQRPLFLPPSGHAEGQ*PLGLAQ
Trigger: CTGGGCCAAGCCCAGGGGTCACTGTCCTTCTGCATG...CCCAGAGGGTGGCAAGAACAGTGGGCGTTGGGAGCCTAGCTCCTGCCACATGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR TCA 90 bp CAGGCTCCATTCTGGGTCGAGTGGAGGACTGGCTCCCAGGGTGAGTTCACACCAGGGGACCCTGCAGGATaGGGACGGCATCGAGATCCC +
Preference number: 4 (lower is better)
Translates to: QAPFWVEWRTGSQGEFTPGDPAG*GRHRDP
Trigger: GGGATCTCGATGCCGTCCTCATCCTGCAGGGTCCCC...TGGTGTGAACTCACCCTGGGAGCCAGTCCTCCACTCGACCCAGAATGGAGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR TCA 90 bp GGAGAGCAGGCTCCATTCTGGGTCGAGTGGAGGACTGGCTCCCAGGGTGAGTTCCCACAATGCTGGCATTaGGCATCCGGGCCTCCCCCA +
Preference number: 4 (lower is better)
Translates to: GEQAPFWVEWRTGSQGEFPQCWH*ASGPPP
Trigger: TGGGGGAGGCCCGGATGCTCAATGCCAGCATTGTGG...GAACTCACCCTGGGAGCCAGTCCTCCACTCGACCCAGAATGGAGCCTGCTCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR TCA 90 bp GGGCTCCATGTGGCAGGAGCTAGGCTCCCAACGCCCACTGTTCTTGCCACCCTCGCTGGAGGCATGAAGTaGGACAATGCTGGCCAGCGG +
Preference number: 4 (lower is better)
Translates to: GLHVAGARLPTPTVLATLAGGMK*DNAGQR
Trigger: CCGCTGGCCAGCATTGTCTCACTTCATGCCTCCAGC...GAGGGTGGCAAGAACAGTGGGCGTTGGGAGCCTAGCTCCTGCCACATGGAGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR TCA 90 bp CTGTTCTTGCCACCCTCTGGGCTCCCAGGCTGGGCTCCGCTAGGCTCCTGTCTCCGGATGGGGACACTCTaGCCTGCACAAAGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: LFLPPSGLPGWAPLGSCLRMGTL*PAQSSA
Trigger: AGCAGAGCTTTGTGCAGGTCAGAGTGTCCCCATCCG...GAGACAGGAGCCTAGCGGAGCCCAGCCTGGGAGCCCAGAGGGTGGCAAGAACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR TCA 90 bp TGCTGTTGGCCTGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCCTGCCCGCCCGGCCCTGGATaGGTTCCACGGTGCCTCCCT +
Preference number: 4 (lower is better)
Translates to: CCWPGWAGLNLFQVLPSCPPGPG*VPRCLP
Trigger: AGGGAGGCACCGTGGAACTCATCCAGGGCCGGGCGG...GCAGGAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCAGGCCAACAGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR TCA 90 bp GGAAGGGTAGGCGCGGAGAGCAGGCTCCATTCTGGGTCGAGTGGAGGACTGGCTTGGACTTCCTGGTCTTaGGACCCGGTCTTGGGACGC +
Preference number: 4 (lower is better)
Translates to: GRVGAESRLHSGSSGGLAWTSWS*DPVLGR
Trigger: GCGTCCCAAGACCGGGTCTCAAGACCAGGAAGTCCA...AGCCAGTCCTCCACTCGACCCAGAATGGAGCCTGCTCTCCGCGCCTACCCTTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR TCA 90 bp TCCATGTGGCAGGAGCTAGGCTCCCAACGCCCACTGTTCTTGCCACCCTCTGGGGACTGGCTCCCAGGGTaGGTTCACACCAGTGCTCCC +
Preference number: 4 (lower is better)
Translates to: SMWQELGSQRPLFLPPSGDWLPG*VHTSAP
Trigger: GGGAGCACTGGTGTGAACTCACCCTGGGAGCCAGTC...CCCAGAGGGTGGCAAGAACAGTGGGCGTTGGGAGCCTAGCTCCTGCCACATGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR GCA 90 bp CCAGGCTGGGCTCCGCTAGGCTCCTGTCTCCCCTGCCAGTTAGTTAGGCAAGTTGGGCTGGGCTGGAGTTaGTGTCCGAAGGATGGGCGG +
Preference number: 4 (lower is better)
Translates to: PGWAPLGSCLPCQLVRQVGLGWS*CPKDGR
Trigger: CCGCCCATCCTTCGGACAGCAACTCCAGCCCAGCCC...AACTTGCCTAACTAACTGGCAGGGGAGACAGGAGCCTAGCGGAGCCCAGCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344849.4
ENST00000373203.9
CDS-3UTR GCA 90 bp CTGTTCTTGCCACCCTCTGGGCTCCCAGGCTGGGCTCCGCTAGGCTCCTGTCTCCCTCTCGGGGCCAGGTaGCATTTTGCTTGGATGCCT +
Preference number: 4 (lower is better)
Translates to: LFLPPSGLPGWAPLGSCLPLGAR*HFAWMP
Trigger: AGGCATCCAAGCAAAATGGCACCTGGCCCCGAGAGG...GAGACAGGAGCCTAGCGGAGCCCAGCCTGGGAGCCCAGAGGGTGGCAAGAACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR GCA 90 bp GAGTGGAGGACTGGCTCCCAGGGTGAGTTCACACCAGTGCTCCCAGCTGGCGGCCCAGTCGGAGGAGGATaGTCTGGGGGTCATTCAGCT +
Preference number: 4 (lower is better)
Translates to: EWRTGSQGEFTPVLPAGGPVGGG*SGGHSA
Trigger: AGCTGAATGACCCCCAGAGCATCCTCCTCCGACTGG...GCCGCCAGCTGGGAGCACTGGTGTGAACTCACCCTGGGAGCCAGTCCTCCACTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR GCA 90 bp GGTAGGCGCGGAGAGCAGGCTCCATTCTGGGTCGAGTGGAGGACTGGCTCCCAGCCAGTCGGAGGAGGATaGTCTGGGGGTCATTCAGCT +
Preference number: 4 (lower is better)
Translates to: GRRGEQAPFWVEWRTGSQPVGGG*SGGHSA
Trigger: AGCTGAATGACCCCCAGAGCATCCTCCTCCGACTGG...CTGGGAGCCAGTCCTCCACTCGACCCAGAATGGAGCCTGCTCTCCGCGCCTACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR GCA 90 bp CTGTTCTTGCCACCCTCTGGGCTCCCAGGCTGGGCTCCGCTAGGCTCCTGTCTCTGCACAAAGCTCTGCTaGCCCGGCTCGATGGTGTTG +
Preference number: 4 (lower is better)
Translates to: LFLPPSGLPGWAPLGSCLCTKLC*PGSMVL
Trigger: CAACACCATCGAGCCGGGGCAGCAGAGCTTTGTGCA...GAGACAGGAGCCTAGCGGAGCCCAGCCTGGGAGCCCAGAGGGTGGCAAGAACAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR GCA 90 bp ACTGTTCTTGCCACCCTCTGGGCTCCCAGGCTGGGCTCCGCTAGGCTCCTGTCTACCTGCACAAAGCTCTaGTGCCCCGGCTCGATGGTG +
Preference number: 4 (lower is better)
Translates to: TVLATLWAPRLGSARLLSTCTKL*CPGSMV
Trigger: CACCATCGAGCCGGGGCAGCAGAGCTTTGTGCAGGT...AGACAGGAGCCTAGCGGAGCCCAGCCTGGGAGCCCAGAGGGTGGCAAGAACAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR GCA 90 bp TCCATGTGGCAGGAGCTAGGCTCCCAACGCCCACTGTTCTTGCCACCCTCTGGGTGCTGTGGTTGGTGCTaGTGCTCTCCGAGGAGGCCG +
Preference number: 4 (lower is better)
Translates to: SMWQELGSQRPLFLPPSGCCGWC*CSPRRP
Trigger: CGGCCTCCTCGGAGAGCAGCAGCACCAACCACAGCA...CCCAGAGGGTGGCAAGAACAGTGGGCGTTGGGAGCCTAGCTCCTGCCACATGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR GCA 90 bp CCATTCTGGGTCGAGTGGAGGACTGGCTCCCAGGGTGAGTTCACACCAGTGCTCGGGGCTATGCCATGCTaGTGGTGGAGCAGGGGGTGC +
Preference number: 4 (lower is better)
Translates to: PFWVEWRTGSQGEFTPVLGAMPC*WWSRGC
Trigger: GCACCCCCTGCTCCACCAGCAGCATGGCATAGCCCC...GAGCACTGGTGTGAACTCACCCTGGGAGCCAGTCCTCCACTCGACCCAGAATGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR GCA 90 bp GGAAGGGTAGGCGCGGAGAGCAGGCTCCATTCTGGGTCGAGTGGAGGACTGGCTGTGAGTTCACACCAGTaGTCCCAGCTGGCGGCTGCT +
Preference number: 4 (lower is better)
Translates to: GRVGAESRLHSGSSGGLAVSSHQ*SQLAAA
Trigger: AGCAGCCGCCAGCTGGGAGCACTGGTGTGAACTCAC...AGCCAGTCCTCCACTCGACCCAGAATGGAGCCTGCTCTCCGCGCCTACCCTTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR GCA 90 bp GGCAGAGGGGGCTCCATGTGGCAGGAGCTAGGCTCCCAACGCCCACTGTTCTTGGTGAGTTCACACCAGTaGTCCCAGCTGGCGGCTGCT +
Preference number: 4 (lower is better)
Translates to: GRGGSMWQELGSQRPLFLVSSHQ*SQLAAA
Trigger: AGCAGCCGCCAGCTGGGAGCACTGGTGTGAACTCAC...CAAGAACAGTGGGCGTTGGGAGCCTAGCTCCTGCCACATGGAGCCCCCTCTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR GCA 90 bp GGCAGAGGGGGCTCCATGTGGCAGGAGCTAGGCTCCCAACGCCCACTGTTCTTGTTCCAAGCCAGTGGCTaGACTGGCAGCAGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: GRGGSMWQELGSQRPLFLFQASG*TGSRPL
Trigger: CAGAGGCCTGCTGCCAGTGCAGCCACTGGCTTGGAA...CAAGAACAGTGGGCGTTGGGAGCCTAGCTCCTGCCACATGGAGCCCCCTCTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR GCA 90 bp GGGCTCCATGTGGCAGGAGCTAGGCTCCCAACGCCCACTGTTCTTGCCACCCTCAACGCCCACTGTTCTTaGCACCCTCTGGGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: GLHVAGARLPTPTVLATLNAHCS*HPLGSQ
Trigger: CTGGGAGCCCAGAGGGTGGCAAGAACAGTGGGCGTT...GAGGGTGGCAAGAACAGTGGGCGTTGGGAGCCTAGCTCCTGCCACATGGAGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR GCA 90 bp TGGCCTGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCCTGCCCAGCTTGGCTACTCCCCCTCTaGTGGCTGCCCGACCGGCAG +
Preference number: 4 (lower is better)
Translates to: WPGWAGLNLFQVLPSCPAWLLPL*WLPDRQ
Trigger: CTGCCGGTCGGGCAGCCAGCAGAGGGGGAGTAGCCA...AGCTGGGCAGGAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCAGGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp ACTGTTCTTGCCACCCTCTGGGCTCCCAGGCTGGGCTCCGCTAGGCTCCTGTCTCTTCAAGGATGGCATTaGGGGCCTGAGCCACGCAGC +
Preference number: 4 (lower is better)
Translates to: TVLATLWAPRLGSARLLSLQGWH*GPEPRS
Trigger: GCTGCGTGGCTCAGGCCCCCAATGCCATCCTTGAAG...AGACAGGAGCCTAGCGGAGCCCAGCCTGGGAGCCCAGAGGGTGGCAAGAACAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp GGAGAGCAGGCTCCATTCTGGGTCGAGTGGAGGACTGGCTCCCAGGGTGAGTTCACCCCCGGGGGCTCTTaGAAGGTGACCAGGCTGGAA +
Preference number: 4 (lower is better)
Translates to: GEQAPFWVEWRTGSQGEFTPGGS*KVTRLE
Trigger: TTCCAGCCTGGTCACCTTCCAAGAGCCCCCGGGGGT...GAACTCACCCTGGGAGCCAGTCCTCCACTCGACCCAGAATGGAGCCTGCTCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp GAGTGGAGGACTGGCTCCCAGGGTGAGTTCACACCAGTGCTCCCAGCTGGCGGCGCCCACTCAAGGATCTaGGTCTTGGGGAAGGATGGC +
Preference number: 4 (lower is better)
Translates to: EWRTGSQGEFTPVLPAGGAHSRI*VLGKDG
Trigger: GCCATCCTTCCCCAAGACCCAGATCCTTGAGTGGGC...GCCGCCAGCTGGGAGCACTGGTGTGAACTCACCCTGGGAGCCAGTCCTCCACTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp CTGTTCTTGCCACCCTCTGGGCTCCCAGGCTGGGCTCCGCTAGGCTCCTGTCTCGCCCACTCAAGGATCTaGGTCTTGGGGAAGGATGGC +
Preference number: 4 (lower is better)
Translates to: LFLPPSGLPGWAPLGSCLAHSRI*VLGKDG
Trigger: GCCATCCTTCCCCAAGACCCAGATCCTTGAGTGGGC...GAGACAGGAGCCTAGCGGAGCCCAGCCTGGGAGCCCAGAGGGTGGCAAGAACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp GGAGAGCAGGCTCCATTCTGGGTCGAGTGGAGGACTGGCTCCCAGGGTGAGTTCAGTGACCCCTGGGCTTaGCCCAGTCGGAGGAGGATG +
Preference number: 4 (lower is better)
Translates to: GEQAPFWVEWRTGSQGEFSDPWA*PSRRRM
Trigger: CATCCTCCTCCGACTGGGCCAAGCCCAGGGGTCACT...GAACTCACCCTGGGAGCCAGTCCTCCACTCGACCCAGAATGGAGCCTGCTCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp GAGGTGCTGTTGGCCTGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCGCCCCGGACCAAGGCTaGAGTACGCGGCCGCCACTC +
Preference number: 4 (lower is better)
Translates to: EVLLAWLGWPESVSSSPFAPDQG*STRPPL
Trigger: GAGTGGCGGCCGCGTACTCCAGCCTTGGTCCGGGGC...GAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCAGGCCAACAGCACCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp CCAGGCTGGGCTCCGCTAGGCTCCTGTCTCCCCTGCCAGTTAGTTAGGCAAGTTGCCACGCCTTCCAAGTaGCAGCCCCGGACCAAGGCT +
Preference number: 4 (lower is better)
Translates to: PGWAPLGSCLPCQLVRQVATPSK*QPRTKA
Trigger: AGCCTTGGTCCGGGGCTGCCACTTGGAAGGCGTGGC...AACTTGCCTAACTAACTGGCAGGGGAGACAGGAGCCTAGCGGAGCCCAGCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp AGTTCAGGTGTGGAGGCCGCAGGGATAGATCCAGGTGGCTCTGGGCTGGGCCCTTGTCCTTGGGAGGAGTaGTCTGGATCGGTGCGGGTG +
Preference number: 4 (lower is better)
Translates to: SSGVEAAGIDPGGSGLGPCPWEE*SGSVRV
Trigger: CACCCGCACCGATCCAGACCACTCCTCCCAAGGACA...AGGGCCCAGCCCAGAGCCACCTGGATCTATCCCTGCGGCCTCCACACCTGAACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp GGAAGGGTAGGCGCGGAGAGCAGGCTCCATTCTGGGTCGAGTGGAGGACTGGCTTGTCCTTGGGAGGAGTaGTCTGGATCGGTGCGGGTG +
Preference number: 4 (lower is better)
Translates to: GRVGAESRLHSGSSGGLACPWEE*SGSVRV
Trigger: CACCCGCACCGATCCAGACCACTCCTCCCAAGGACA...AGCCAGTCCTCCACTCGACCCAGAATGGAGCCTGCTCTCCGCGCCTACCCTTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp GGGCTCCATGTGGCAGGAGCTAGGCTCCCAACGCCCACTGTTCTTGCCACCCTCTGTCCTTGGGAGGAGTaGTCTGGATCGGTGCGGGTG +
Preference number: 4 (lower is better)
Translates to: GLHVAGARLPTPTVLATLCPWEE*SGSVRV
Trigger: CACCCGCACCGATCCAGACCACTCCTCCCAAGGACA...GAGGGTGGCAAGAACAGTGGGCGTTGGGAGCCTAGCTCCTGCCACATGGAGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp GAGGTGCTGTTGGCCTGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCGCTCCCCCGGGTGGATaGAGGGGCCCGGCATGCTCA +
Preference number: 4 (lower is better)
Translates to: EVLLAWLGWPESVSSSPFAPPGG*RGPACS
Trigger: TGAGCATGCCGGGCCCCTCCATCCACCCGGGGGAGC...GAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCAGGCCAACAGCACCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344849.4
CDS-3UTR CCA 90 bp GGAAGGGTAGGCGCGGAGAGCAGGCTCCATTCTGGGTCGAGTGGAGGACTGGCTGTGCTCCCGATGCTGTaGTTGGTGCTGCTGCTCTCC +
Preference number: 4 (lower is better)
Translates to: GRVGAESRLHSGSSGGLAVLPML*LVLLLS
Trigger: GGAGAGCAGCAGCACCAACCACAGCATCGGGAGCAC...AGCCAGTCCTCCACTCGACCCAGAATGGAGCCTGCTCTCCGCGCCTACCCTTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp GGAAGGGTAGGCGCGGAGAGCAGGCTCCATTCTGGGTCGAGTGGAGGACTGGCTCCATTCTGGGTCGAGTaGAGGACTGGCTCCCAGGGT +
Preference number: 4 (lower is better)
Translates to: GRVGAESRLHSGSSGGLAPFWVE*RTGSQG
Trigger: ACCCTGGGAGCCAGTCCTCCACTCGACCCAGAATGG...AGCCAGTCCTCCACTCGACCCAGAATGGAGCCTGCTCTCCGCGCCTACCCTTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp GGCAGAGGGGGCTCCATGTGGCAGGAGCTAGGCTCCCAACGCCCACTGTTCTTGGAGCAGGCTCCATTCTaGGTCGAGTGGAGGACTGGC +
Preference number: 4 (lower is better)
Translates to: GRGGSMWQELGSQRPLFLEQAPF*VEWRTG
Trigger: GCCAGTCCTCCACTCGACCCAGAATGGAGCCTGCTC...CAAGAACAGTGGGCGTTGGGAGCCTAGCTCCTGCCACATGGAGCCCCCTCTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp AGGGAGGCGGGAAGGGTAGGCGCGGAGAGCAGGCTCCATTCTGGGTCGAGTGGAGAAGGTTCTGTGGGGTaGAGGGACCCCAAGGTGTTC +
Preference number: 4 (lower is better)
Translates to: REAGRVGAESRLHSGSSGEGSVG*RDPKVF
Trigger: GAACACCTTGGGGTCCCTCCACCCCACAGAACCTTC...TCCACTCGACCCAGAATGGAGCCTGCTCTCCGCGCCTACCCTTCCCGCCTCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp AGTTCAGGTGTGGAGGCCGCAGGGATAGATCCAGGTGGCTCTGGGCTGGGCCCTGGGTTGAAGGTTCTGTaGGGTGGAGGGACCCCAAGG +
Preference number: 4 (lower is better)
Translates to: SSGVEAAGIDPGGSGLGPGLKVL*GGGTPR
Trigger: CCTTGGGGTCCCTCCACCCCACAGAACCTTCAACCC...AGGGCCCAGCCCAGAGCCACCTGGATCTATCCCTGCGGCCTCCACACCTGAACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp GCTGCTGCTCTCCGAGGAGGCCGGGGCAGCCACCGCCACCACGGGCTCCCGCTTCAAATGACAGGGACTTaGGTTTTTACAACAGCGTGG +
Preference number: 4 (lower is better)
Translates to: AAALRGGRGSHRHHGLPLQMTGT*VFTTAW
Trigger: CCACGCTGTTGTAAAAACCCAAGTCCCTGTCATTTG...AAGCGGGAGCCCGTGGTGGCGGTGGCTGCCCCGGCCTCCTCGGAGAGCAGCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344849.4
CDS-3UTR CCA 90 bp ACTGTTCTTGCCACCCTCTGGGCTCCCAGGCTGGGCTCCGCTAGGCTCCTGTCTGAGGTGCTGTTGGCCTaGCTGGGCTGGCCTGAATCT +
Preference number: 4 (lower is better)
Translates to: TVLATLWAPRLGSARLLSEVLLA*LGWPES
Trigger: AGATTCAGGCCAGCCCAGCCAGGCCAACAGCACCTC...AGACAGGAGCCTAGCGGAGCCCAGCCTGGGAGCCCAGAGGGTGGCAAGAACAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp GGAAGGGTAGGCGCGGAGAGCAGGCTCCATTCTGGGTCGAGTGGAGGACTGGCTGAGGTGCTGTTGGCCTaGCTGGGCTGGCCTGAATCT +
Preference number: 4 (lower is better)
Translates to: GRVGAESRLHSGSSGGLAEVLLA*LGWPES
Trigger: AGATTCAGGCCAGCCCAGCCAGGCCAACAGCACCTC...AGCCAGTCCTCCACTCGACCCAGAATGGAGCCTGCTCTCCGCGCCTACCCTTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp GGCAGAGGGGGCTCCATGTGGCAGGAGCTAGGCTCCCAACGCCCACTGTTCTTGAGGGATAGATCCAGGTaGCTCTGGGCTGGGCCCTCT +
Preference number: 4 (lower is better)
Translates to: GRGGSMWQELGSQRPLFLRDRSR*LWAGPS
Trigger: AGAGGGCCCAGCCCAGAGCCACCTGGATCTATCCCT...CAAGAACAGTGGGCGTTGGGAGCCTAGCTCCTGCCACATGGAGCCCCCTCTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp CCATTCTGGGTCGAGTGGAGGACTGGCTCCCAGGGTGAGTTCACACCAGTGCTCTCTGGGCTCCCAGGCTaGGCTCCGCTAGGCTCCTGT +
Preference number: 4 (lower is better)
Translates to: PFWVEWRTGSQGEFTPVLSGLPG*APLGSC
Trigger: ACAGGAGCCTAGCGGAGCCCAGCCTGGGAGCCCAGA...GAGCACTGGTGTGAACTCACCCTGGGAGCCAGTCCTCCACTCGACCCAGAATGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp TGGCCTGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCCTGCCCAGCTCGGGCTCCCGCTTGCTaGGGGAACGCGTGTGCGAGT +
Preference number: 4 (lower is better)
Translates to: WPGWAGLNLFQVLPSCPARAPAC*GNACAS
Trigger: ACTCGCACACGCGTTCCCCCAGCAAGCGGGAGCCCG...AGCTGGGCAGGAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCAGGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373203.9
ENST00000480266.5
CDS-3UTR TCA 90 bp GGCAGAGGGGGCTCCATGTGGCAGGAGCTAGGCTCCCAACGCCCACTGTTCTTGGGGGCTCTTGGAAGGTaGCCAGGCTGGAATTGTAGG +
Preference number: 4 (lower is better)
Translates to: GRGGSMWQELGSQRPLFLGALGR*PGWNCR
Trigger: CCTACAATTCCAGCCTGGTCACCTTCCAAGAGCCCC...CAAGAACAGTGGGCGTTGGGAGCCTAGCTCCTGCCACATGGAGCCCCCTCTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR TCA 90 bp TGGCCTGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCCTGCCCAGCTGGGGACCCTGCAGGATaGGGACGGCATCGAGATCCC +
Preference number: 4 (lower is better)
Translates to: WPGWAGLNLFQVLPSCPAGDPAG*GRHRDP
Trigger: GGGATCTCGATGCCGTCCTCATCCTGCAGGGTCCCC...AGCTGGGCAGGAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCAGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR TCA 90 bp GAGTGGAGGACTGGCTCCCAGGGTGAGTTCACACCAGTGCTCCCAGCTGGCGGCTCTGGATCAAGGACATaGGCAGCTCCGGGCTACAAG +
Preference number: 4 (lower is better)
Translates to: EWRTGSQGEFTPVLPAGGSGSRT*AAPGYK
Trigger: CTTGTAGCCCGGAGCTGCTCATGTCCTTGATCCAGA...GCCGCCAGCTGGGAGCACTGGTGTGAACTCACCCTGGGAGCCAGTCCTCCACTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR TCA 90 bp GGGCTCCATGTGGCAGGAGCTAGGCTCCCAACGCCCACTGTTCTTGCCACCCTCCGGATGGGGACACTCTaGCCTGCACAAAGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: GLHVAGARLPTPTVLATLRMGTL*PAQSSA
Trigger: AGCAGAGCTTTGTGCAGGTCAGAGTGTCCCCATCCG...GAGGGTGGCAAGAACAGTGGGCGTTGGGAGCCTAGCTCCTGCCACATGGAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR TCA 90 bp TGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCCTGCCCAGCTCAGTTCCGCCCGGCCCTGGATaGGTTCCACGGTGCCTCCCT +
Preference number: 4 (lower is better)
Translates to: WLGWPESVSSSPFLPSSVPPGPG*VPRCLP
Trigger: AGGGAGGCACCGTGGAACTCATCCAGGGCCGGGCGG...AACTGAGCTGGGCAGGAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR TCA 90 bp TGGCCTGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCCTGCCCAGCTAGTGGAGGAGGAAGCTaGAGCGCGGGTCACCCTCGG +
Preference number: 4 (lower is better)
Translates to: WPGWAGLNLFQVLPSCPASGGGS*SAGHPR
Trigger: CCGAGGGTGACCCGCGCTTCAGCTTCCTCCTCCACT...AGCTGGGCAGGAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCAGGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR TCA 90 bp CAGGCTCCATTCTGGGTCGAGTGGAGGACTGGCTCCCAGGGTGAGTTCACACCAGGGCTACCGTGCAGCTaGGGGTGCCGGTTTTGGGTA +
Preference number: 4 (lower is better)
Translates to: QAPFWVEWRTGSQGEFTPGLPCS*GCRFWV
Trigger: TACCCAAAACCGGCACCCTCAGCTGCACGGTAGCCC...TGGTGTGAACTCACCCTGGGAGCCAGTCCTCCACTCGACCCAGAATGGAGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR GCA 90 bp GGCAGAGGGGGCTCCATGTGGCAGGAGCTAGGCTCCCAACGCCCACTGTTCTTGCCTCTCGGGGCCAGGTaGCATTTTGCTTGGATGCCT +
Preference number: 4 (lower is better)
Translates to: GRGGSMWQELGSQRPLFLPLGAR*HFAWMP
Trigger: AGGCATCCAAGCAAAATGGCACCTGGCCCCGAGAGG...CAAGAACAGTGGGCGTTGGGAGCCTAGCTCCTGCCACATGGAGCCCCCTCTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR GCA 90 bp AGTTCAGGTGTGGAGGCCGCAGGGATAGATCCAGGTGGCTCTGGGCTGGGCCCTGGCTGGCTTCCAGCATaGAGAAGGACAGTGACCCCT +
Preference number: 4 (lower is better)
Translates to: SSGVEAAGIDPGGSGLGPGWLPA*RRTVTP
Trigger: AGGGGTCACTGTCCTTCTGCATGCTGGAAGCCAGCC...AGGGCCCAGCCCAGAGCCACCTGGATCTATCCCTGCGGCCTCCACACCTGAACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR GCA 90 bp CTGCCCAGCTCAGTTCACCAGTGCTGGATCCAGGTTCAAATGACAGGGACTTGGGCCGCCACTCGAGCGTaGGGCCCATGTCCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: LPSSVHQCWIQVQMTGTWAATRA*GPCPGW
Trigger: CCAGCCAGGACATGGGCCGCACGCTCGAGTGGCGGC...CCAAGTCCCTGTCATTTGAACCTGGATCCAGCACTGGTGAACTGAGCTGGGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR GCA 90 bp GAGTGGAGGACTGGCTCCCAGGGTGAGTTCACACCAGTGCTCCCAGCTGGCGGCCCAGTGGTCCAGATCTaGATGTTGTGGTTGGCGTCG +
Preference number: 4 (lower is better)
Translates to: EWRTGSQGEFTPVLPAGGPVVQI*MLWLAS
Trigger: CGACGCCAACCACAACATGCAGATCTGGACCACTGG...GCCGCCAGCTGGGAGCACTGGTGTGAACTCACCCTGGGAGCCAGTCCTCCACTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR GCA 90 bp GGCAGAGGGGGCTCCATGTGGCAGGAGCTAGGCTCCCAACGCCCACTGTTCTTGCGAGGCCTTTGCTTGTaGAACCAGACAGGTCAGGGC +
Preference number: 4 (lower is better)
Translates to: GRGGSMWQELGSQRPLFLRGLCL*NQTGQG
Trigger: GCCCTGACCTGTCTGGTTGCACAAGCAAAGGCCTCG...CAAGAACAGTGGGCGTTGGGAGCCTAGCTCCTGCCACATGGAGCCCCCTCTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR GCA 90 bp GGAGAGCAGGCTCCATTCTGGGTCGAGTGGAGGACTGGCTCCCAGGGTGAGTTCCGATGCTGTGGTTGGTaGTGCTGCTCTCCGAGGAGG +
Preference number: 4 (lower is better)
Translates to: GEQAPFWVEWRTGSQGEFRCCGW*CCSPRR
Trigger: CCTCCTCGGAGAGCAGCAGCACCAACCACAGCATCG...GAACTCACCCTGGGAGCCAGTCCTCCACTCGACCCAGAATGGAGCCTGCTCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR GCA 90 bp TCCATGTGGCAGGAGCTAGGCTCCCAACGCCCACTGTTCTTGCCACCCTCTGGGCGATGCTGTGGTTGGTaGTGCTGCTCTCCGAGGAGG +
Preference number: 4 (lower is better)
Translates to: SMWQELGSQRPLFLPPSGRCCGW*CCSPRR
Trigger: CCTCCTCGGAGAGCAGCAGCACCAACCACAGCATCG...CCCAGAGGGTGGCAAGAACAGTGGGCGTTGGGAGCCTAGCTCCTGCCACATGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR GCA 90 bp AGGTGCTGTTGGCCTGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCCGCCGGGGCTATGCCATaGTGCTGGTGGAGCAGGGGG +
Preference number: 4 (lower is better)
Translates to: RCCWPGWAGLNLFQVLPSAGAMP*CWWSRG
Trigger: CCCCCTGCTCCACCAGCAGCATGGCATAGCCCCGGC...GGAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCAGGCCAACAGCACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR GCA 90 bp TCCATGTGGCAGGAGCTAGGCTCCCAACGCCCACTGTTCTTGCCACCCTCTGGGGTGAGTTCACACCAGTaGTCCCAGCTGGCGGCTGCT +
Preference number: 4 (lower is better)
Translates to: SMWQELGSQRPLFLPPSGVSSHQ*SQLAAA
Trigger: AGCAGCCGCCAGCTGGGAGCACTGGTGTGAACTCAC...CCCAGAGGGTGGCAAGAACAGTGGGCGTTGGGAGCCTAGCTCCTGCCACATGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp TGGCCTGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCCTGCCCAGCTTTGCTGTCCGAAGGATaGGCGGGGAGGGGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: WPGWAGLNLFQVLPSCPALLSEG*AGRGCW
Trigger: CCAGCACCCCCTCCCCGCCCATCCTTCGGACAGCAA...AGCTGGGCAGGAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCAGGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344849.4
ENST00000373203.9
CDS-3UTR CCA 90 bp GGCAGAGGGGGCTCCATGTGGCAGGAGCTAGGCTCCCAACGCCCACTGTTCTTGGGGATTCCCAGGGCCTaGAGATGCAGGAAGACACTG +
Preference number: 4 (lower is better)
Translates to: GRGGSMWQELGSQRPLFLGIPRA*RCRKTL
Trigger: CAGTGTCTTCCTGCATCTCCAGGCCCTGGGAATCCC...CAAGAACAGTGGGCGTTGGGAGCCTAGCTCCTGCCACATGGAGCCCCCTCTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp GGAGAGCAGGCTCCATTCTGGGTCGAGTGGAGGACTGGCTCCCAGGGTGAGTTCGTAGGCCAAGTGCAGTaGGATTCCCAGGGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: GEQAPFWVEWRTGSQGEFVGQVQ*DSQGLE
Trigger: CTCCAGGCCCTGGGAATCCCACTGCACTTGGCCTAC...GAACTCACCCTGGGAGCCAGTCCTCCACTCGACCCAGAATGGAGCCTGCTCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp GGAAGGGTAGGCGCGGAGAGCAGGCTCCATTCTGGGTCGAGTGGAGGACTGGCTCGGAGGAGGATGCTCTaGGGGTCATTCAGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: GRVGAESRLHSGSSGGLARRRML*GSFSSA
Trigger: TGCTGAGCTGAATGACCCCCAGAGCATCCTCCTCCG...AGCCAGTCCTCCACTCGACCCAGAATGGAGCCTGCTCTCCGCGCCTACCCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp AGTTCAGGTGTGGAGGCCGCAGGGATAGATCCAGGTGGCTCTGGGCTGGGCCCTCGGAGGAGGATGCTCTaGGGGTCATTCAGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: SSGVEAAGIDPGGSGLGPRRRML*GSFSSA
Trigger: TGCTGAGCTGAATGACCCCCAGAGCATCCTCCTCCG...AGGGCCCAGCCCAGAGCCACCTGGATCTATCCCTGCGGCCTCCACACCTGAACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp CCAGGCTGGGCTCCGCTAGGCTCCTGTCTCCCCTGCCAGTTAGTTAGGCAAGTTAAGGACAGTGACCCCTaGGCTTGGCCCAGTCGGAGG +
Preference number: 4 (lower is better)
Translates to: PGWAPLGSCLPCQLVRQVKDSDP*AWPSRR
Trigger: CCTCCGACTGGGCCAAGCCCAGGGGTCACTGTCCTT...AACTTGCCTAACTAACTGGCAGGGGAGACAGGAGCCTAGCGGAGCCCAGCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp TCCATGTGGCAGGAGCTAGGCTCCCAACGCCCACTGTTCTTGCCACCCTCTGGGGGCCCATGTCCTGGCTaGCTTCCAGCATGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: SMWQELGSQRPLFLPPSGGPCPG*LPACRR
Trigger: CCTTCTGCATGCTGGAAGCCAGCCAGGACATGGGCC...CCCAGAGGGTGGCAAGAACAGTGGGCGTTGGGAGCCTAGCTCCTGCCACATGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp GAGTGGAGGACTGGCTCCCAGGGTGAGTTCACACCAGTGCTCCCAGCTGGCGGCGCCTACCACCGCAGCTaGAGGCATGAAGTGAGACAA +
Preference number: 4 (lower is better)
Translates to: EWRTGSQGEFTPVLPAGGAYHRS*RHEVRQ
Trigger: TTGTCTCACTTCATGCCTCCAGCTGCGGTGGTAGGC...GCCGCCAGCTGGGAGCACTGGTGTGAACTCACCCTGGGAGCCAGTCCTCCACTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp GGTAGGCGCGGAGAGCAGGCTCCATTCTGGGTCGAGTGGAGGACTGGCTCCCAGCCTGCATGCCACAGCTaGAGTAAGCACTGCGCAAGA +
Preference number: 4 (lower is better)
Translates to: GRRGEQAPFWVEWRTGSQPACHS*SKHCAR
Trigger: TCTTGCGCAGTGCTTACTCCAGCTGTGGCATGCAGG...CTGGGAGCCAGTCCTCCACTCGACCCAGAATGGAGCCTGCTCTCCGCGCCTACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp GGCAGAGGGGGCTCCATGTGGCAGGAGCTAGGCTCCCAACGCCCACTGTTCTTGGAACTCGGAGACGGATaGGGACACTCTGACCTGCAC +
Preference number: 4 (lower is better)
Translates to: GRGGSMWQELGSQRPLFLELGDG*GHSDLH
Trigger: GTGCAGGTCAGAGTGTCCCCATCCGTCTCCGAGTTC...CAAGAACAGTGGGCGTTGGGAGCCTAGCTCCTGCCACATGGAGCCCCCTCTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp CAGGCTCCATTCTGGGTCGAGTGGAGGACTGGCTCCCAGGGTGAGTTCACACCAGTCACCCTCGGGGCTTaGGGACAGCAGGCTCACACA +
Preference number: 4 (lower is better)
Translates to: QAPFWVEWRTGSQGEFTPVTLGA*GQQAHT
Trigger: TGTGTGAGCCTGCTGTCCCCAAGCCCCGAGGGTGAC...TGGTGTGAACTCACCCTGGGAGCCAGTCCTCCACTCGACCCAGAATGGAGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp CCAGGCTGGGCTCCGCTAGGCTCCTGTCTCCCCTGCCAGTTAGTTAGGCAAGTTCTTGAGACCCGGTCTTaGGACGCAGGGCTACCGTGC +
Preference number: 4 (lower is better)
Translates to: PGWAPLGSCLPCQLVRQVLETRS*DAGLPC
Trigger: GCACGGTAGCCCTGCGTCCCAAGACCGGGTCTCAAG...AACTTGCCTAACTAACTGGCAGGGGAGACAGGAGCCTAGCGGAGCCCAGCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp TGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCCTGCCCAGCTCAGTTCTTGCTGGGGGAACCTaGGAGCGGGAGCGGGGGCAG +
Preference number: 4 (lower is better)
Translates to: WLGWPESVSSSPFLPSSVLAGGT*ERERGQ
Trigger: CTGCCCCCGCTCCCGCTCCCAGGTTCCCCCAGCAAG...AACTGAGCTGGGCAGGAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000344849.4
CDS-3UTR CCA 90 bp CAGGCTCCATTCTGGGTCGAGTGGAGGACTGGCTCCCAGGGTGAGTTCACACCAACCAGTGCTCCCAGCTaGCGGCTGCTCAGTCTCTCC +
Preference number: 4 (lower is better)
Translates to: QAPFWVEWRTGSQGEFTPTSAPS*RLLSLS
Trigger: GGAGAGACTGAGCAGCCGCCAGCTGGGAGCACTGGT...TGGTGTGAACTCACCCTGGGAGCCAGTCCTCCACTCGACCCAGAATGGAGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp GGAGAGCAGGCTCCATTCTGGGTCGAGTGGAGGACTGGCTCCCAGGGTGAGTTCGAGCAGGCTCCATTCTaGGTCGAGTGGAGGACTGGC +
Preference number: 4 (lower is better)
Translates to: GEQAPFWVEWRTGSQGEFEQAPF*VEWRTG
Trigger: GCCAGTCCTCCACTCGACCCAGAATGGAGCCTGCTC...GAACTCACCCTGGGAGCCAGTCCTCCACTCGACCCAGAATGGAGCCTGCTCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp AGGTGCTGTTGGCCTGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCCCTACTCCCCCTCTGCTaGCTGCCCGACCGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: RCCWPGWAGLNLFQVLPSLLPLC*LPDRQR
Trigger: CCTCTGCCGGTCGGGCAGCCAGCAGAGGGGGAGTAG...GGAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCAGGCCAACAGCACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR TCA 90 bp GAGGTGCTGTTGGCCTGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCGCAGCTCTGTGGTGTTaGCCCCCGGGGGCTCTTGGA +
Preference number: 4 (lower is better)
Translates to: EVLLAWLGWPESVSSSPFAALWC*PPGALG
Trigger: TCCAAGAGCCCCCGGGGGTCAACACCACAGAGCTGC...GAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCAGGCCAACAGCACCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR TCA 90 bp CCATTCTGGGTCGAGTGGAGGACTGGCTCCCAGGGTGAGTTCACACCAGTGCTCGCTGGAGGCATGAAGTaGGACAATGCTGGCCAGCGG +
Preference number: 4 (lower is better)
Translates to: PFWVEWRTGSQGEFTPVLAGGMK*DNAGQR
Trigger: CCGCTGGCCAGCATTGTCTCACTTCATGCCTCCAGC...GAGCACTGGTGTGAACTCACCCTGGGAGCCAGTCCTCCACTCGACCCAGAATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR TCA 90 bp GGAAGGGTAGGCGCGGAGAGCAGGCTCCATTCTGGGTCGAGTGGAGGACTGGCTAGAAGGTCAGGCCCGTaGTGGTGCACTTCAAATGCG +
Preference number: 4 (lower is better)
Translates to: GRVGAESRLHSGSSGGLARRSGP*WCTSNA
Trigger: CGCATTTGAAGTGCACCATCACGGGCCTGACCTTCT...AGCCAGTCCTCCACTCGACCCAGAATGGAGCCTGCTCTCCGCGCCTACCCTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR TCA 90 bp GAGTGGAGGACTGGCTCCCAGGGTGAGTTCACACCAGTGCTCCCAGCTGGCGGCAGAGGCTGTCCATGTTaGGGCAGTGCACCTTTTTCC +
Preference number: 4 (lower is better)
Translates to: EWRTGSQGEFTPVLPAGGRGCPC*GSAPFS
Trigger: GGAAAAAGGTGCACTGCCTCAACATGGACAGCCTCT...GCCGCCAGCTGGGAGCACTGGTGTGAACTCACCCTGGGAGCCAGTCCTCCACTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR TCA 90 bp AGGGAGGCGGGAAGGGTAGGCGCGGAGAGCAGGCTCCATTCTGGGTCGAGTGGAAGAGGCTGTCCATGTTaGGGCAGTGCACCTTTTTCC +
Preference number: 4 (lower is better)
Translates to: REAGRVGAESRLHSGSSGRGCPC*GSAPFS
Trigger: GGAAAAAGGTGCACTGCCTCAACATGGACAGCCTCT...TCCACTCGACCCAGAATGGAGCCTGCTCTCCGCGCCTACCCTTCCCGCCTCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR TCA 90 bp TGCTGTTGGCCTGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCCTGCGGAAGGCACCAAAGGTaGTGCCCAGCACGGCGGGCA +
Preference number: 4 (lower is better)
Translates to: CCWPGWAGLNLFQVLPSCGRHQR*CPARRA
Trigger: TGCCCGCCGTGCTGGGCATCACCTTTGGTGCCTTCC...GCAGGAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCAGGCCAACAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR TCA 90 bp GTGCTGTTGGCCTGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCCTGGGAAGGCACCAAAGGTaGTGCCCAGCACGGCGGGCA +
Preference number: 4 (lower is better)
Translates to: VLLAWLGWPESVSSSPFLGRHQR*CPARRA
Trigger: TGCCCGCCGTGCTGGGCATCACCTTTGGTGCCTTCC...CAGGAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCAGGCCAACAGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR TCA 90 bp GGCAGAGGGGGCTCCATGTGGCAGGAGCTAGGCTCCCAACGCCCACTGTTCTTGCTGGCTGGGCTGGCCTaGATCTGTTTCAAGTTCTCC +
Preference number: 4 (lower is better)
Translates to: GRGGSMWQELGSQRPLFLLAGLA*ICFKFS
Trigger: GGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCAG...CAAGAACAGTGGGCGTTGGGAGCCTAGCTCCTGCCACATGGAGCCCCCTCTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR GCA 90 bp GGAGAGCAGGCTCCATTCTGGGTCGAGTGGAGGACTGGCTCCCAGGGTGAGTTCCCAGTCGGAGGAGGATaGTCTGGGGGTCATTCAGCT +
Preference number: 4 (lower is better)
Translates to: GEQAPFWVEWRTGSQGEFPVGGG*SGGHSA
Trigger: AGCTGAATGACCCCCAGAGCATCCTCCTCCGACTGG...GAACTCACCCTGGGAGCCAGTCCTCCACTCGACCCAGAATGGAGCCTGCTCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR GCA 90 bp AGGTGCTGTTGGCCTGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCCAGGACCCTCAGGATGTaGGCCTCCTTGTGGCCGGCC +
Preference number: 4 (lower is better)
Translates to: RCCWPGWAGLNLFQVLPSRTLRM*ASLWPA
Trigger: GGCCGGCCACAAGGAGGCGCACATCCTGAGGGTCCT...GGAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCAGGCCAACAGCACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR GCA 90 bp GGCAGAGGGGGCTCCATGTGGCAGGAGCTAGGCTCCCAACGCCCACTGTTCTTGCCAGTGGTCCAGATCTaGATGTTGTGGTTGGCGTCG +
Preference number: 4 (lower is better)
Translates to: GRGGSMWQELGSQRPLFLPVVQI*MLWLAS
Trigger: CGACGCCAACCACAACATGCAGATCTGGACCACTGG...CAAGAACAGTGGGCGTTGGGAGCCTAGCTCCTGCCACATGGAGCCCCCTCTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR GCA 90 bp CCAGGCTGGGCTCCGCTAGGCTCCTGTCTCCCCTGCCAGTTAGTTAGGCAAGTTACCTGCACAAAGCTCTaGTGCCCCGGCTCGATGGTG +
Preference number: 4 (lower is better)
Translates to: PGWAPLGSCLPCQLVRQVTCTKL*CPGSMV
Trigger: CACCATCGAGCCGGGGCAGCAGAGCTTTGTGCAGGT...AACTTGCCTAACTAACTGGCAGGGGAGACAGGAGCCTAGCGGAGCCCAGCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR GCA 90 bp CAGGCTCCATTCTGGGTCGAGTGGAGGACTGGCTCCCAGGGTGAGTTCACACCAGGGGACACTCTGACCTaGACAAAGCTCTGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: QAPFWVEWRTGSQGEFTPGDTLT*TKLCCP
Trigger: GGGGCAGCAGAGCTTTGTGCAGGTCAGAGTGTCCCC...TGGTGTGAACTCACCCTGGGAGCCAGTCCTCCACTCGACCCAGAATGGAGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR GCA 90 bp GTGCTGTTGGCCTGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCCTGTGTGGTTGGTGCTGCTaGTCTCCGAGGAGGCCGGGG +
Preference number: 4 (lower is better)
Translates to: VLLAWLGWPESVSSSPFLCGWCC*SPRRPG
Trigger: CCCCGGCCTCCTCGGAGAGCAGCAGCACCAACCACA...CAGGAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCAGGCCAACAGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR GCA 90 bp CCAGGCTGGGCTCCGCTAGGCTCCTGTCTCCCCTGCCAGTTAGTTAGGCAAGTTCGATGCTGTGGTTGGTaGTGCTGCTCTCCGAGGAGG +
Preference number: 4 (lower is better)
Translates to: PGWAPLGSCLPCQLVRQVRCCGW*CCSPRR
Trigger: CCTCCTCGGAGAGCAGCAGCACCAACCACAGCATCG...AACTTGCCTAACTAACTGGCAGGGGAGACAGGAGCCTAGCGGAGCCCAGCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR GCA 90 bp CAGGCTCCATTCTGGGTCGAGTGGAGGACTGGCTCCCAGGGTGAGTTCACACCATCTGGGTGCTCCCGATaGTGTGGTTGGTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: QAPFWVEWRTGSQGEFTPSGCSR*CGWCCC
Trigger: GCAGCAGCACCAACCACAGCATCGGGAGCACCCAGA...TGGTGTGAACTCACCCTGGGAGCCAGTCCTCCACTCGACCCAGAATGGAGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR GCA 90 bp CCAGGCTGGGCTCCGCTAGGCTCCTGTCTCCCCTGCCAGTTAGTTAGGCAAGTTTCTGGGTGCTCCCGATaGTGTGGTTGGTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: PGWAPLGSCLPCQLVRQVSGCSR*CGWCCC
Trigger: GCAGCAGCACCAACCACAGCATCGGGAGCACCCAGA...AACTTGCCTAACTAACTGGCAGGGGAGACAGGAGCCTAGCGGAGCCCAGCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR GCA 90 bp TGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCCTGCCCAGCTCAGTTGCCGGGGCTATGCCATaGTGCTGGTGGAGCAGGGGG +
Preference number: 4 (lower is better)
Translates to: WLGWPESVSSSPFLPSSVAGAMP*CWWSRG
Trigger: CCCCCTGCTCCACCAGCAGCATGGCATAGCCCCGGC...AACTGAGCTGGGCAGGAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR GCA 90 bp GGTAGGCGCGGAGAGCAGGCTCCATTCTGGGTCGAGTGGAGGACTGGCTCCCAGCAAGTTCTCCCTTCCTaGCCAGCTCAGTTCACCAGT +
Preference number: 4 (lower is better)
Translates to: GRRGEQAPFWVEWRTGSQQVLPS*PAQFTS
Trigger: ACTGGTGAACTGAGCTGGGCAGGAAGGGAGAACTTG...CTGGGAGCCAGTCCTCCACTCGACCCAGAATGGAGCCTGCTCTCCGCGCCTACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR GCA 90 bp CTGTTCTTGCCACCCTCTGGGCTCCCAGGCTGGGCTCCGCTAGGCTCCTGTCTCGGCTCCTGTCTCCCCTaGCAGTTAGTTAGGCAAGTT +
Preference number: 4 (lower is better)
Translates to: LFLPPSGLPGWAPLGSCLGSCLP*QLVRQV
Trigger: AACTTGCCTAACTAACTGGCAGGGGAGACAGGAGCC...GAGACAGGAGCCTAGCGGAGCCCAGCCTGGGAGCCCAGAGGGTGGCAAGAACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR GCA 90 bp GGTAGGCGCGGAGAGCAGGCTCCATTCTGGGTCGAGTGGAGGACTGGCTCCCAGGGCTCCTGTCTCCCCTaGCAGTTAGTTAGGCAAGTT +
Preference number: 4 (lower is better)
Translates to: GRRGEQAPFWVEWRTGSQGSCLP*QLVRQV
Trigger: AACTTGCCTAACTAACTGGCAGGGGAGACAGGAGCC...CTGGGAGCCAGTCCTCCACTCGACCCAGAATGGAGCCTGCTCTCCGCGCCTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR GCA 90 bp CCCAGCTCAGTTCACCAGTGCTGGATCCAGGTTCAAATGACAGGGACTTGGGTTCCACGGGCTCCCGCTTaGTGGGGGAACGCGTGTGCG +
Preference number: 4 (lower is better)
Translates to: PSSVHQCWIQVQMTGTWVPRAPA*WGNACA
Trigger: CGCACACGCGTTCCCCCAGCAAGCGGGAGCCCGTGG...AACCCAAGTCCCTGTCATTTGAACCTGGATCCAGCACTGGTGAACTGAGCTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp TGGCCTGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCCTGCCCAGCTTGGGGGCCTGTGCGCTaGGCCTTATCCTGTGTCCAG +
Preference number: 4 (lower is better)
Translates to: WPGWAGLNLFQVLPSCPAWGPVR*ALSCVQ
Trigger: CTGGACACAGGATAAGGCCCAGCGCACAGGCCCCCA...AGCTGGGCAGGAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCAGGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344849.4
ENST00000373203.9
CDS-3UTR CCA 90 bp CCAGGCTGGGCTCCGCTAGGCTCCTGTCTCCCCTGCCAGTTAGTTAGGCAAGTTCTTCAAGGATGGCATTaGGGGCCTGAGCCACGCAGC +
Preference number: 4 (lower is better)
Translates to: PGWAPLGSCLPCQLVRQVLQGWH*GPEPRS
Trigger: GCTGCGTGGCTCAGGCCCCCAATGCCATCCTTGAAG...AACTTGCCTAACTAACTGGCAGGGGAGACAGGAGCCTAGCGGAGCCCAGCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp CAGGCTCCATTCTGGGTCGAGTGGAGGACTGGCTCCCAGGGTGAGTTCACACCAGTAGGCCAAGTGCAGTaGGATTCCCAGGGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: QAPFWVEWRTGSQGEFTPVGQVQ*DSQGLE
Trigger: CTCCAGGCCCTGGGAATCCCACTGCACTTGGCCTAC...TGGTGTGAACTCACCCTGGGAGCCAGTCCTCCACTCGACCCAGAATGGAGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp GGAGAGCAGGCTCCATTCTGGGTCGAGTGGAGGACTGGCTCCCAGGGTGAGTTCGCCCACTCAAGGATCTaGGTCTTGGGGAAGGATGGC +
Preference number: 4 (lower is better)
Translates to: GEQAPFWVEWRTGSQGEFAHSRI*VLGKDG
Trigger: GCCATCCTTCCCCAAGACCCAGATCCTTGAGTGGGC...GAACTCACCCTGGGAGCCAGTCCTCCACTCGACCCAGAATGGAGCCTGCTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp AGGGAGGCGGGAAGGGTAGGCGCGGAGAGCAGGCTCCATTCTGGGTCGAGTGGACAGATCTGCATGTTGTaGTTGGCGTCGATGAGCCAG +
Preference number: 4 (lower is better)
Translates to: REAGRVGAESRLHSGSSGQICML*LASMSQ
Trigger: CTGGCTCATCGACGCCAACCACAACATGCAGATCTG...TCCACTCGACCCAGAATGGAGCCTGCTCTCCGCGCCTACCCTTCCCGCCTCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp CTGTTCTTGCCACCCTCTGGGCTCCCAGGCTGGGCTCCGCTAGGCTCCTGTCTCGCCTTGAGGTGTGTCTaGGAGCTTGAAGCCACGAAT +
Preference number: 4 (lower is better)
Translates to: LFLPPSGLPGWAPLGSCLALRCV*ELEATN
Trigger: ATTCGTGGCTTCAAGCTCCCAGACACACCTCAAGGC...GAGACAGGAGCCTAGCGGAGCCCAGCCTGGGAGCCCAGAGGGTGGCAAGAACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp AGTTCAGGTGTGGAGGCCGCAGGGATAGATCCAGGTGGCTCTGGGCTGGGCCCTGAAGTGAGACAATGCTaGCCAGCGGTAGCTCCACGA +
Preference number: 4 (lower is better)
Translates to: SSGVEAAGIDPGGSGLGPEVRQC*PAVAPR
Trigger: TCGTGGAGCTACCGCTGGCCAGCATTGTCTCACTTC...AGGGCCCAGCCCAGAGCCACCTGGATCTATCCCTGCGGCCTCCACACCTGAACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp CCATTCTGGGTCGAGTGGAGGACTGGCTCCCAGGGTGAGTTCACACCAGTGCTCTTGGGAGGAGTGGTCTaGATCGGTGCGGGTGAGGTC +
Preference number: 4 (lower is better)
Translates to: PFWVEWRTGSQGEFTPVLLGGVV*IGAGEV
Trigger: GACCTCACCCGCACCGATCCAGACCACTCCTCCCAA...GAGCACTGGTGTGAACTCACCCTGGGAGCCAGTCCTCCACTCGACCCAGAATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp GGGCTCCATGTGGCAGGAGCTAGGCTCCCAACGCCCACTGTTCTTGCCACCCTCCCTGCATGCCACAGCTaGAGTAAGCACTGCGCAAGA +
Preference number: 4 (lower is better)
Translates to: GLHVAGARLPTPTVLATLPACHS*SKHCAR
Trigger: TCTTGCGCAGTGCTTACTCCAGCTGTGGCATGCAGG...GAGGGTGGCAAGAACAGTGGGCGTTGGGAGCCTAGCTCCTGCCACATGGAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp CCATTCTGGGTCGAGTGGAGGACTGGCTCCCAGGGTGAGTTCACACCAGTGCTCCCGGCTCGATGGTGTTaGAGGCCTGGAGGAAGTGTG +
Preference number: 4 (lower is better)
Translates to: PFWVEWRTGSQGEFTPVLPARWC*RPGGSV
Trigger: CACACTTCCTCCAGGCCTCCAACACCATCGAGCCGG...GAGCACTGGTGTGAACTCACCCTGGGAGCCAGTCCTCCACTCGACCCAGAATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp AGGTGCTGTTGGCCTGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCCGCTGCCCCGGCTCGATaGTGTTGGAGGCCTGGAGGA +
Preference number: 4 (lower is better)
Translates to: RCCWPGWAGLNLFQVLPSAAPAR*CWRPGG
Trigger: TCCTCCAGGCCTCCAACACCATCGAGCCGGGGCAGC...GGAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCAGGCCAACAGCACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp GTGCTGTTGGCCTGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCCTGGCTGCCCCGGCTCGATaGTGTTGGAGGCCTGGAGGA +
Preference number: 4 (lower is better)
Translates to: VLLAWLGWPESVSSSPFLAAPAR*CWRPGG
Trigger: TCCTCCAGGCCTCCAACACCATCGAGCCGGGGCAGC...CAGGAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCAGGCCAACAGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp GAGGTGCTGTTGGCCTGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCGCTGCCCCGGCTCGATaGTGTTGGAGGCCTGGAGGA +
Preference number: 4 (lower is better)
Translates to: EVLLAWLGWPESVSSSPFAAPAR*CWRPGG
Trigger: TCCTCCAGGCCTCCAACACCATCGAGCCGGGGCAGC...GAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCAGGCCAACAGCACCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp GGGCTCCATGTGGCAGGAGCTAGGCTCCCAACGCCCACTGTTCTTGCCACCCTCTGGCAGCTGTCTAACTaGAGCAGGAACTCGGAGACG +
Preference number: 4 (lower is better)
Translates to: GLHVAGARLPTPTVLATLWQLSN*SRNSET
Trigger: CGTCTCCGAGTTCCTGCTCCAGTTAGACAGCTGCCA...GAGGGTGGCAAGAACAGTGGGCGTTGGGAGCCTAGCTCCTGCCACATGGAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp GTGCTGTTGGCCTGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCCTGTTGGCCGCCCGGCCCTaGATGAGTTCCACGGTGCCT +
Preference number: 4 (lower is better)
Translates to: VLLAWLGWPESVSSSPFLLAARP*MSSTVP
Trigger: AGGCACCGTGGAACTCATCCAGGGCCGGGCGGCCAA...CAGGAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCAGGCCAACAGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp TGGCCTGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCCTGCCCAGCTGTCACCCTCGGGGCTTaGGGACAGCAGGCTCACACA +
Preference number: 4 (lower is better)
Translates to: WPGWAGLNLFQVLPSCPAVTLGA*GQQAHT
Trigger: TGTGTGAGCCTGCTGTCCCCAAGCCCCGAGGGTGAC...AGCTGGGCAGGAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCAGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp GGAGAGCAGGCTCCATTCTGGGTCGAGTGGAGGACTGGCTCCCAGGGTGAGTTCGAAGGTTCTGTGGGGTaGAGGGACCCCAAGGTGTTC +
Preference number: 4 (lower is better)
Translates to: GEQAPFWVEWRTGSQGEFEGSVG*RDPKVF
Trigger: GAACACCTTGGGGTCCCTCCACCCCACAGAACCTTC...GAACTCACCCTGGGAGCCAGTCCTCCACTCGACCCAGAATGGAGCCTGCTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp CCATTCTGGGTCGAGTGGAGGACTGGCTCCCAGGGTGAGTTCACACCAGTGCTCGGGTTGAAGGTTCTGTaGGGTGGAGGGACCCCAAGG +
Preference number: 4 (lower is better)
Translates to: PFWVEWRTGSQGEFTPVLGLKVL*GGGTPR
Trigger: CCTTGGGGTCCCTCCACCCCACAGAACCTTCAACCC...GAGCACTGGTGTGAACTCACCCTGGGAGCCAGTCCTCCACTCGACCCAGAATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp AGTTCAGGTGTGGAGGCCGCAGGGATAGATCCAGGTGGCTCTGGGCTGGGCCCTAAGTGGTCTGTCTCCTaGGCAGCCATATCCCAGACC +
Preference number: 4 (lower is better)
Translates to: SSGVEAAGIDPGGSGLGPKWSVS*AAISQT
Trigger: GGTCTGGGATATGGCTGCCCAGGAGACAGACCACTT...AGGGCCCAGCCCAGAGCCACCTGGATCTATCCCTGCGGCCTCCACACCTGAACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp GGCAGAGGGGGCTCCATGTGGCAGGAGCTAGGCTCCCAACGCCCACTGTTCTTGAAGTGGTCTGTCTCCTaGGCAGCCATATCCCAGACC +
Preference number: 4 (lower is better)
Translates to: GRGGSMWQELGSQRPLFLKWSVS*AAISQT
Trigger: GGTCTGGGATATGGCTGCCCAGGAGACAGACCACTT...CAAGAACAGTGGGCGTTGGGAGCCTAGCTCCTGCCACATGGAGCCCCCTCTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp AGTTCAGGTGTGGAGGCCGCAGGGATAGATCCAGGTGGCTCTGGGCTGGGCCCTTGCTGTTGGCCTGGCTaGGCTGGCCTGAATCTGTTT +
Preference number: 4 (lower is better)
Translates to: SSGVEAAGIDPGGSGLGPCCWPG*AGLNLF
Trigger: AAACAGATTCAGGCCAGCCCAGCCAGGCCAACAGCA...AGGGCCCAGCCCAGAGCCACCTGGATCTATCCCTGCGGCCTCCACACCTGAACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp CCATTCTGGGTCGAGTGGAGGACTGGCTCCCAGGGTGAGTTCACACCAGTGCTCCCAGGACAAGCAGCTTaGCTACTCCCCCTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: PFWVEWRTGSQGEFTPVLPGQAA*LLPLCW
Trigger: CCAGCAGAGGGGGAGTAGCCAAGCTGCTTGTCCTGG...GAGCACTGGTGTGAACTCACCCTGGGAGCCAGTCCTCCACTCGACCCAGAATGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp GGGCTCCATGTGGCAGGAGCTAGGCTCCCAACGCCCACTGTTCTTGCCACCCTCAGCTCTGGAGCCAGATaGCCTGGATCAAATCCCAGC +
Preference number: 4 (lower is better)
Translates to: GLHVAGARLPTPTVLATLSSGAR*PGSNPS
Trigger: GCTGGGATTTGATCCAGGCCATCTGGCTCCAGAGCT...GAGGGTGGCAAGAACAGTGGGCGTTGGGAGCCTAGCTCCTGCCACATGGAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480266.5
CDS-3UTR TCA 90 bp AGGTGCTGTTGGCCTGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCCGGGCTACCGTGCAGCTaGGGGTGCCGGTTTTGGGTA +
Preference number: 4 (lower is better)
Translates to: RCCWPGWAGLNLFQVLPSGLPCS*GCRFWV
Trigger: TACCCAAAACCGGCACCCTCAGCTGCACGGTAGCCC...GGAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCAGGCCAACAGCACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR GCA 90 bp GGAGAGCAGGCTCCATTCTGGGTCGAGTGGAGGACTGGCTCCCAGGGTGAGTTCGGCCAGGTGCCATTTTaGTTGGATGCCTGGAGAGTC +
Preference number: 4 (lower is better)
Translates to: GEQAPFWVEWRTGSQGEFGQVPF*LDAWRV
Trigger: GACTCTCCAGGCATCCAAGCAAAATGGCACCTGGCC...GAACTCACCCTGGGAGCCAGTCCTCCACTCGACCCAGAATGGAGCCTGCTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR GCA 90 bp GAGGTGCTGTTGGCCTGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCGGGGCCCCTCTCAGCTaGCCACTCAAGGATCTGGGT +
Preference number: 4 (lower is better)
Translates to: EVLLAWLGWPESVSSSPFGAPLS*PLKDLG
Trigger: ACCCAGATCCTTGAGTGGGCAGCTGAGAGGGGCCCC...GAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCAGGCCAACAGCACCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR GCA 90 bp GTGCTGTTGGCCTGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCCTGGGGGCCCCTCTCAGCTaGCCACTCAAGGATCTGGGT +
Preference number: 4 (lower is better)
Translates to: VLLAWLGWPESVSSSPFLGAPLS*PLKDLG
Trigger: ACCCAGATCCTTGAGTGGGCAGCTGAGAGGGGCCCC...CAGGAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCAGGCCAACAGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR GCA 90 bp CAGGCTCCATTCTGGGTCGAGTGGAGGACTGGCTCCCAGGGTGAGTTCACACCAATCGAGATCCCCGGGTaGGCAGCTCAGTTCCACCTT +
Preference number: 4 (lower is better)
Translates to: QAPFWVEWRTGSQGEFTPIEIPG*AAQFHL
Trigger: AAGGTGGAACTGAGCTGCGCACCCGGGGATCTCGAT...TGGTGTGAACTCACCCTGGGAGCCAGTCCTCCACTCGACCCAGAATGGAGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR GCA 90 bp AGTTCAGGTGTGGAGGCCGCAGGGATAGATCCAGGTGGCTCTGGGCTGGGCCCTCATGAAGTGAGACAATaGTGGCCAGCGGTAGCTCCA +
Preference number: 4 (lower is better)
Translates to: SSGVEAAGIDPGGSGLGPHEVRQ*WPAVAP
Trigger: TGGAGCTACCGCTGGCCAGCATTGTCTCACTTCATG...AGGGCCCAGCCCAGAGCCACCTGGATCTATCCCTGCGGCCTCCACACCTGAACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR GCA 90 bp TGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCCTGCCCAGCTCAGTTGGTGCGGGTGAGGTCTaGAGCCTACCACCGCAGCTG +
Preference number: 4 (lower is better)
Translates to: WLGWPESVSSSPFLPSSVGAGEV*SLPPQL
Trigger: CAGCTGCGGTGGTAGGCTGCAGACCTCACCCGCACC...AACTGAGCTGGGCAGGAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR GCA 90 bp TGCTGTTGGCCTGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCCTGCTGCTGTGGTTGGTGCTaGTGCTCTCCGAGGAGGCCG +
Preference number: 4 (lower is better)
Translates to: CCWPGWAGLNLFQVLPSCCCGWC*CSPRRP
Trigger: CGGCCTCCTCGGAGAGCAGCAGCACCAACCACAGCA...GCAGGAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCAGGCCAACAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR GCA 90 bp AGGTGCTGTTGGCCTGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCCAGGGGGTGCTCTGGGTaGTCCCGATGCTGTGGTTGG +
Preference number: 4 (lower is better)
Translates to: RCCWPGWAGLNLFQVLPSRGCSG*SRCCGW
Trigger: CCAACCACAGCATCGGGAGCACCCAGAGCACCCCCT...GGAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCAGGCCAACAGCACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR GCA 90 bp GAGGTGCTGTTGGCCTGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCAGGGGGTGCTCTGGGTaGTCCCGATGCTGTGGTTGG +
Preference number: 4 (lower is better)
Translates to: EVLLAWLGWPESVSSSPFRGCSG*SRCCGW
Trigger: CCAACCACAGCATCGGGAGCACCCAGAGCACCCCCT...GAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCAGGCCAACAGCACCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR GCA 90 bp CTGCCCAGCTCAGTTCACCAGTGCTGGATCCAGGTTCAAATGACAGGGACTTGGTGGTGGAGCAGGGGGTaGTCTGGGTGCTCCCGATGC +
Preference number: 4 (lower is better)
Translates to: LPSSVHQCWIQVQMTGTWWWSRG*SGCSRC
Trigger: GCATCGGGAGCACCCAGAGCACCCCCTGCTCCACCA...CCAAGTCCCTGTCATTTGAACCTGGATCCAGCACTGGTGAACTGAGCTGGGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp TGCTGTTGGCCTGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCCTGCAGGGGTCAGGAGAAGTaGACACAGGGACGCGGGGCT +
Preference number: 4 (lower is better)
Translates to: CCWPGWAGLNLFQVLPSCRGQEK*TQGRGA
Trigger: AGCCCCGCGTCCCTGTGTCCACTTCTCCTGACCCCT...GCAGGAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCAGGCCAACAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344849.4
ENST00000373203.9
CDS-3UTR CCA 90 bp GGCAGAGGGGGCTCCATGTGGCAGGAGCTAGGCTCCCAACGCCCACTGTTCTTGCAGCCCTTCGAGACCTaGCTAGTGGTATATGTCACC +
Preference number: 4 (lower is better)
Translates to: GRGGSMWQELGSQRPLFLQPFET*LVVYVT
Trigger: GGTGACATATACCACTAGCCAGGTCTCGAAGGGCTG...CAAGAACAGTGGGCGTTGGGAGCCTAGCTCCTGCCACATGGAGCCCCCTCTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp GGGCTCCATGTGGCAGGAGCTAGGCTCCCAACGCCCACTGTTCTTGCCACCCTCCAGCCCTTCGAGACCTaGCTAGTGGTATATGTCACC +
Preference number: 4 (lower is better)
Translates to: GLHVAGARLPTPTVLATLQPFET*LVVYVT
Trigger: GGTGACATATACCACTAGCCAGGTCTCGAAGGGCTG...GAGGGTGGCAAGAACAGTGGGCGTTGGGAGCCTAGCTCCTGCCACATGGAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp GGAGAGCAGGCTCCATTCTGGGTCGAGTGGAGGACTGGCTCCCAGGGTGAGTTCCATGGACTTCAAGGATaGCATTGGGGGCCTGAGCCA +
Preference number: 4 (lower is better)
Translates to: GEQAPFWVEWRTGSQGEFHGLQG*HWGPEP
Trigger: TGGCTCAGGCCCCCAATGCCATCCTTGAAGTCCATG...GAACTCACCCTGGGAGCCAGTCCTCCACTCGACCCAGAATGGAGCCTGCTCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp CCAGGGCCCCTCAATCCCTCAGAGGCTTCACTGGGCTCCCCCGGGTGGATGGAGTCCAGGAAGAGGACATaGACTTCAAGGATGGCATTG +
Preference number: 4 (lower is better)
Translates to: PGPLNPSEASLGSPGWMESRKRT*TSRMAL
Trigger: CAATGCCATCCTTGAAGTCCATGTCCTCTTCCTGGA...CTCCATCCACCCGGGGGAGCCCAGTGAAGCCTCTGAGGGATTGAGGGGCCCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344849.4
CDS-3UTR CCA 90 bp GTGCTGTTGGCCTGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCCTGAAGGACAGTGACCCCTaGGCTTGGCCCAGTCGGAGG +
Preference number: 4 (lower is better)
Translates to: VLLAWLGWPESVSSSPFLKDSDP*AWPSRR
Trigger: CCTCCGACTGGGCCAAGCCCAGGGGTCACTGTCCTT...CAGGAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCAGGCCAACAGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp AGGTGCTGTTGGCCTGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCCATGTGCGCCTCCTTGTaGCCGGCCACGCCTTCCAAG +
Preference number: 4 (lower is better)
Translates to: RCCWPGWAGLNLFQVLPSMCASL*PATPSK
Trigger: CTTGGAAGGCGTGGCCGGCCACAAGGAGGCGCACAT...GGAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCAGGCCAACAGCACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp GGAGAGCAGGCTCCATTCTGGGTCGAGTGGAGGACTGGCTCCCAGGGTGAGTTCGAAGTGAGACAATGCTaGCCAGCGGTAGCTCCACGA +
Preference number: 4 (lower is better)
Translates to: GEQAPFWVEWRTGSQGEFEVRQC*PAVAPR
Trigger: TCGTGGAGCTACCGCTGGCCAGCATTGTCTCACTTC...GAACTCACCCTGGGAGCCAGTCCTCCACTCGACCCAGAATGGAGCCTGCTCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp GGGCTCCATGTGGCAGGAGCTAGGCTCCCAACGCCCACTGTTCTTGCCACCCTCTTAGTACCAGGGTCATaGCGTCGTCGGCACACTTTG +
Preference number: 4 (lower is better)
Translates to: GLHVAGARLPTPTVLATLLVPGS*RRRHTL
Trigger: CAAAGTGTGCCGACGACGCCATGACCCTGGTACTAA...GAGGGTGGCAAGAACAGTGGGCGTTGGGAGCCTAGCTCCTGCCACATGGAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp CCATTCTGGGTCGAGTGGAGGACTGGCTCCCAGGGTGAGTTCACACCAGTGCTCGAACTCGGAGACGGATaGGGACACTCTGACCTGCAC +
Preference number: 4 (lower is better)
Translates to: PFWVEWRTGSQGEFTPVLELGDG*GHSDLH
Trigger: GTGCAGGTCAGAGTGTCCCCATCCGTCTCCGAGTTC...GAGCACTGGTGTGAACTCACCCTGGGAGCCAGTCCTCCACTCGACCCAGAATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp GAGGTGCTGTTGGCCTGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCGTCACCCTCGGGGCTTaGGGACAGCAGGCTCACACA +
Preference number: 4 (lower is better)
Translates to: EVLLAWLGWPESVSSSPFVTLGA*GQQAHT
Trigger: TGTGTGAGCCTGCTGTCCCCAAGCCCCGAGGGTGAC...GAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCAGGCCAACAGCACCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp CCAGGCTGGGCTCCGCTAGGCTCCTGTCTCCCCTGCCAGTTAGTTAGGCAAGTTGAAGGTTCTGTGGGGTaGAGGGACCCCAAGGTGTTC +
Preference number: 4 (lower is better)
Translates to: PGWAPLGSCLPCQLVRQVEGSVG*RDPKVF
Trigger: GAACACCTTGGGGTCCCTCCACCCCACAGAACCTTC...AACTTGCCTAACTAACTGGCAGGGGAGACAGGAGCCTAGCGGAGCCCAGCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp GGGCTCCATGTGGCAGGAGCTAGGCTCCCAACGCCCACTGTTCTTGCCACCCTCATATCCCAGACCCACTaGGTTGAAGGTTCTGTGGGG +
Preference number: 4 (lower is better)
Translates to: GLHVAGARLPTPTVLATLISQTH*VEGSVG
Trigger: CCCCACAGAACCTTCAACCCAGTGGGTCTGGGATAT...GAGGGTGGCAAGAACAGTGGGCGTTGGGAGCCTAGCTCCTGCCACATGGAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp ACTGTTCTTGCCACCCTCTGGGCTCCCAGGCTGGGCTCCGCTAGGCTCCTGTCTTTGGCCTGGCTGGGCTaGCCTGAATCTGTTTCAAGT +
Preference number: 4 (lower is better)
Translates to: TVLATLWAPRLGSARLLSLAWLG*PESVSS
Trigger: ACTTGAAACAGATTCAGGCCAGCCCAGCCAGGCCAA...AGACAGGAGCCTAGCGGAGCCCAGCCTGGGAGCCCAGAGGGTGGCAAGAACAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp GTGCTGTTGGCCTGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCCTGCAGGTGGCTCTGGGCTaGGCCCTCTTCTCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: VLLAWLGWPESVSSSPFLQVALG*ALFSSQ
Trigger: CTGGGAAGAGAAGAGGGCCCAGCCCAGAGCCACCTG...CAGGAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCAGGCCAACAGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp CCCAGCTCAGTTCACCAGTGCTGGATCCAGGTTCAAATGACAGGGACTTGGGTTCGGGCTCCCGCTTGCTaGGGGAACGCGTGTGCGAGT +
Preference number: 4 (lower is better)
Translates to: PSSVHQCWIQVQMTGTWVRAPAC*GNACAS
Trigger: ACTCGCACACGCGTTCCCCCAGCAAGCGGGAGCCCG...AACCCAAGTCCCTGTCATTTGAACCTGGATCCAGCACTGGTGAACTGAGCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373203.9
ENST00000480266.5
CDS-3UTR TCA 90 bp TGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCCTGCCCAGCTCAGTTAGTCAGCTCCAGCTGTaGCGGGCCCGTTGGGAACTC +
Preference number: 4 (lower is better)
Translates to: WLGWPESVSSSPFLPSSVSQLQL*RARWEL
Trigger: GAGTTCCCAACGGGCCCGTCACAGCTGGAGCTGACT...AACTGAGCTGGGCAGGAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR TCA 90 bp TGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCCTGCCCAGCTCAGTTTGTGGTTGGCGTCGATaGGCCAGGACACGTAGGGGG +
Preference number: 4 (lower is better)
Translates to: WLGWPESVSSSPFLPSSVCGWRR*ARTRRG
Trigger: CCCCCTACGTGTCCTGGCTCATCGACGCCAACCACA...AACTGAGCTGGGCAGGAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR TCA 90 bp AGGTGCTGTTGGCCTGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCCTGGACTTCCTGGTCTTaGGACCCGGTCTTGGGACGC +
Preference number: 4 (lower is better)
Translates to: RCCWPGWAGLNLFQVLPSWTSWS*DPVLGR
Trigger: GCGTCCCAAGACCGGGTCTCAAGACCAGGAAGTCCA...GGAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCAGGCCAACAGCACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR TCA 90 bp TGCTGTTGGCCTGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCCTGCCCAGACCCACTGGGTTaGAGGTTCTGTGGGGTGGAG +
Preference number: 4 (lower is better)
Translates to: CCWPGWAGLNLFQVLPSCPDPLG*RFCGVE
Trigger: CTCCACCCCACAGAACCTTCAACCCAGTGGGTCTGG...GCAGGAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCAGGCCAACAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR GCA 90 bp CCAGGCTGGGCTCCGCTAGGCTCCTGTCTCCCCTGCCAGTTAGTTAGGCAAGTTGGCCAGGTGCCATTTTaGTTGGATGCCTGGAGAGTC +
Preference number: 4 (lower is better)
Translates to: PGWAPLGSCLPCQLVRQVGQVPF*LDAWRV
Trigger: GACTCTCCAGGCATCCAAGCAAAATGGCACCTGGCC...AACTTGCCTAACTAACTGGCAGGGGAGACAGGAGCCTAGCGGAGCCCAGCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR GCA 90 bp TGGCCTGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCCTGCCCAGCTGGCTGGCTTCCAGCATaGAGAAGGACAGTGACCCCT +
Preference number: 4 (lower is better)
Translates to: WPGWAGLNLFQVLPSCPAGWLPA*RRTVTP
Trigger: AGGGGTCACTGTCCTTCTGCATGCTGGAAGCCAGCC...AGCTGGGCAGGAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCAGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR GCA 90 bp CAGGCTCCATTCTGGGTCGAGTGGAGGACTGGCTCCCAGGGTGAGTTCACACCACCAGTGGTCCAGATCTaGATGTTGTGGTTGGCGTCG +
Preference number: 4 (lower is better)
Translates to: QAPFWVEWRTGSQGEFTPPVVQI*MLWLAS
Trigger: CGACGCCAACCACAACATGCAGATCTGGACCACTGG...TGGTGTGAACTCACCCTGGGAGCCAGTCCTCCACTCGACCCAGAATGGAGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR GCA 90 bp TCCATGTGGCAGGAGCTAGGCTCCCAACGCCCACTGTTCTTGCCACCCTCTGGGCATGAAGTGAGACAATaGTGGCCAGCGGTAGCTCCA +
Preference number: 4 (lower is better)
Translates to: SMWQELGSQRPLFLPPSGHEVRQ*WPAVAP
Trigger: TGGAGCTACCGCTGGCCAGCATTGTCTCACTTCATG...CCCAGAGGGTGGCAAGAACAGTGGGCGTTGGGAGCCTAGCTCCTGCCACATGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR GCA 90 bp GGAAGGGTAGGCGCGGAGAGCAGGCTCCATTCTGGGTCGAGTGGAGGACTGGCTTCCATGTTGAGGCAGTaGACCTTTTTCCGCTGTGGT +
Preference number: 4 (lower is better)
Translates to: GRVGAESRLHSGSSGGLASMLRQ*TFFRCG
Trigger: ACCACAGCGGAAAAAGGTGCACTGCCTCAACATGGA...AGCCAGTCCTCCACTCGACCCAGAATGGAGCCTGCTCTCCGCGCCTACCCTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR GCA 90 bp CCCAGCTCAGTTCACCAGTGCTGGATCCAGGTTCAAATGACAGGGACTTGGGTTCTCCCAGCTGGCGGCTaGTCAGTCTCTCCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: PSSVHQCWIQVQMTGTWVLPAGG*SVSPAG
Trigger: CCCAGCAGGAGAGACTGAGCAGCCGCCAGCTGGGAG...AACCCAAGTCCCTGTCATTTGAACCTGGATCCAGCACTGGTGAACTGAGCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp CCAGGCTGGGCTCCGCTAGGCTCCTGTCTCCCCTGCCAGTTAGTTAGGCAAGTTCATGGACTTCAAGGATaGCATTGGGGGCCTGAGCCA +
Preference number: 4 (lower is better)
Translates to: PGWAPLGSCLPCQLVRQVHGLQG*HWGPEP
Trigger: TGGCTCAGGCCCCCAATGCCATCCTTGAAGTCCATG...AACTTGCCTAACTAACTGGCAGGGGAGACAGGAGCCTAGCGGAGCCCAGCCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp GGAAGGGTAGGCGCGGAGAGCAGGCTCCATTCTGGGTCGAGTGGAGGACTGGCTAGGTGCCATTTTGCTTaGATGCCTGGAGAGTCAGCT +
Preference number: 4 (lower is better)
Translates to: GRVGAESRLHSGSSGGLARCHFA*MPGESA
Trigger: AGCTGACTCTCCAGGCATCCAAGCAAAATGGCACCT...AGCCAGTCCTCCACTCGACCCAGAATGGAGCCTGCTCTCCGCGCCTACCCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp CTGCCCAGCTCAGTTCACCAGTGCTGGATCCAGGTTCAAATGACAGGGACTTGGACCCCCGGGGGCTCTTaGAAGGTGACCAGGCTGGAA +
Preference number: 4 (lower is better)
Translates to: LPSSVHQCWIQVQMTGTWTPGGS*KVTRLE
Trigger: TTCCAGCCTGGTCACCTTCCAAGAGCCCCCGGGGGT...CCAAGTCCCTGTCATTTGAACCTGGATCCAGCACTGGTGAACTGAGCTGGGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp TGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCCTGCCCAGCTCAGTTACCCCCGGGGGCTCTTaGAAGGTGACCAGGCTGGAA +
Preference number: 4 (lower is better)
Translates to: WLGWPESVSSSPFLPSSVTPGGS*KVTRLE
Trigger: TTCCAGCCTGGTCACCTTCCAAGAGCCCCCGGGGGT...AACTGAGCTGGGCAGGAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp CCATTCTGGGTCGAGTGGAGGACTGGCTCCCAGGGTGAGTTCACACCAGTGCTCGGTCTTGGGGAAGGATaGCAGCTCTGTGGTGTTGAC +
Preference number: 4 (lower is better)
Translates to: PFWVEWRTGSQGEFTPVLGLGEG*QLCGVD
Trigger: GTCAACACCACAGAGCTGCCATCCTTCCCCAAGACC...GAGCACTGGTGTGAACTCACCCTGGGAGCCAGTCCTCCACTCGACCCAGAATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp CTGCCCAGCTCAGTTCACCAGTGCTGGATCCAGGTTCAAATGACAGGGACTTGGAAGGACAGTGACCCCTaGGCTTGGCCCAGTCGGAGG +
Preference number: 4 (lower is better)
Translates to: LPSSVHQCWIQVQMTGTWKDSDP*AWPSRR
Trigger: CCTCCGACTGGGCCAAGCCCAGGGGTCACTGTCCTT...CCAAGTCCCTGTCATTTGAACCTGGATCCAGCACTGGTGAACTGAGCTGGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp TGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCCTGCCCAGCTCAGTTATGTGCGCCTCCTTGTaGCCGGCCACGCCTTCCAAG +
Preference number: 4 (lower is better)
Translates to: WLGWPESVSSSPFLPSSVMCASL*PATPSK
Trigger: CTTGGAAGGCGTGGCCGGCCACAAGGAGGCGCACAT...AACTGAGCTGGGCAGGAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp AGGTGCTGTTGGCCTGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCCTTGGGAGGAGTGGTCTaGATCGGTGCGGGTGAGGTC +
Preference number: 4 (lower is better)
Translates to: RCCWPGWAGLNLFQVLPSLGGVV*IGAGEV
Trigger: GACCTCACCCGCACCGATCCAGACCACTCCTCCCAA...GGAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCAGGCCAACAGCACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp GGAAGGGTAGGCGCGGAGAGCAGGCTCCATTCTGGGTCGAGTGGAGGACTGGCTTCGGCACACTTTGTCTaGATCAAGGACATGAGCAGC +
Preference number: 4 (lower is better)
Translates to: GRVGAESRLHSGSSGGLASAHFV*IKDMSS
Trigger: GCTGCTCATGTCCTTGATCCAGACAAAGTGTGCCGA...AGCCAGTCCTCCACTCGACCCAGAATGGAGCCTGCTCTCCGCGCCTACCCTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp CCATTCTGGGTCGAGTGGAGGACTGGCTCCCAGGGTGAGTTCACACCAGTGCTCTGGCAGCTGTCTAACTaGAGCAGGAACTCGGAGACG +
Preference number: 4 (lower is better)
Translates to: PFWVEWRTGSQGEFTPVLWQLSN*SRNSET
Trigger: CGTCTCCGAGTTCCTGCTCCAGTTAGACAGCTGCCA...GAGCACTGGTGTGAACTCACCCTGGGAGCCAGTCCTCCACTCGACCCAGAATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp CCCAGCTCAGTTCACCAGTGCTGGATCCAGGTTCAAATGACAGGGACTTGGGTTTTGGCCGCCCGGCCCTaGATGAGTTCCACGGTGCCT +
Preference number: 4 (lower is better)
Translates to: PSSVHQCWIQVQMTGTWVLAARP*MSSTVP
Trigger: AGGCACCGTGGAACTCATCCAGGGCCGGGCGGCCAA...AACCCAAGTCCCTGTCATTTGAACCTGGATCCAGCACTGGTGAACTGAGCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp GGTAGGCGCGGAGAGCAGGCTCCATTCTGGGTCGAGTGGAGGACTGGCTCCCAGTGCCGGTTTTGGGTATaGGTACTGTGTAGAAGTGGA +
Preference number: 4 (lower is better)
Translates to: GRRGEQAPFWVEWRTGSQCRFWV*VLCRSG
Trigger: TCCACTTCTACACAGTACCCATACCCAAAACCGGCA...CTGGGAGCCAGTCCTCCACTCGACCCAGAATGGAGCCTGCTCTCCGCGCCTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp GTGCTGTTGGCCTGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCCTGCCATTCTGGGTCGAGTaGAGGACTGGCTCCCAGGGT +
Preference number: 4 (lower is better)
Translates to: VLLAWLGWPESVSSSPFLPFWVE*RTGSQG
Trigger: ACCCTGGGAGCCAGTCCTCCACTCGACCCAGAATGG...CAGGAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCAGGCCAACAGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp AGGTGCTGTTGGCCTGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCCCCATTCTGGGTCGAGTaGAGGACTGGCTCCCAGGGT +
Preference number: 4 (lower is better)
Translates to: RCCWPGWAGLNLFQVLPSPFWVE*RTGSQG
Trigger: ACCCTGGGAGCCAGTCCTCCACTCGACCCAGAATGG...GGAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCAGGCCAACAGCACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp TGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCCTGCCCAGCTCAGTTGGTGTTCCAAGCCAGTaGCTGCACTGGCAGCAGGCC +
Preference number: 4 (lower is better)
Translates to: WLGWPESVSSSPFLPSSVGVPSQ*LHWQQA
Trigger: GGCCTGCTGCCAGTGCAGCCACTGGCTTGGAACACC...AACTGAGCTGGGCAGGAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp GGAGAGCAGGCTCCATTCTGGGTCGAGTGGAGGACTGGCTCCCAGGGTGAGTTCATATCCCAGACCCACTaGGTTGAAGGTTCTGTGGGG +
Preference number: 4 (lower is better)
Translates to: GEQAPFWVEWRTGSQGEFISQTH*VEGSVG
Trigger: CCCCACAGAACCTTCAACCCAGTGGGTCTGGGATAT...GAACTCACCCTGGGAGCCAGTCCTCCACTCGACCCAGAATGGAGCCTGCTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp TGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCCTGCCCAGCTCAGTTCAGGTGGCTCTGGGCTaGGCCCTCTTCTCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: WLGWPESVSSSPFLPSSVQVALG*ALFSSQ
Trigger: CTGGGAAGAGAAGAGGGCCCAGCCCAGAGCCACCTG...AACTGAGCTGGGCAGGAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp AGGTGCTGTTGGCCTGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCCAGAGGGGGCTCCATGTaGCAGGAGCTAGGCTCCCAA +
Preference number: 4 (lower is better)
Translates to: RCCWPGWAGLNLFQVLPSRGGSM*QELGSQ
Trigger: TTGGGAGCCTAGCTCCTGCCACATGGAGCCCCCTCT...GGAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCAGGCCAACAGCACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR TCA 90 bp GTGCTGTTGGCCTGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCCTGTCGGGGCCCACAGGCTaGAGGTCACAATGGACTGTT +
Preference number: 4 (lower is better)
Translates to: VLLAWLGWPESVSSSPFLSGPTG*RSQWTV
Trigger: AACAGTCCATTGTGACCTTCAGCCTGTGGGCCCCGA...CAGGAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCAGGCCAACAGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR TCA 90 bp CTGTTCTTGCCACCCTCTGGGCTCCCAGGCTGGGCTCCGCTAGGCTCCTGTCTCTCTCTGGAAAGATCTTaGAGGAGTATTCTCCAGTGG +
Preference number: 4 (lower is better)
Translates to: LFLPPSGLPGWAPLGSCLSLERS*RSILQW
Trigger: CCACTGGAGAATACTCCTTCAAGATCTTTCCAGAGA...GAGACAGGAGCCTAGCGGAGCCCAGCCTGGGAGCCCAGAGGGTGGCAAGAACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR GCA 90 bp GTGCTGGATCCAGGTTCAAATGACAGGGACTTGGGTTTTTACAACAGCGTGGCAGAGCGACGGCGTCCCTaGTCCAGCCTTCTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: VLDPGSNDRDLGFYNSVAERRRP*SSLLGW
Trigger: CCACCCCAGAAGGCTGGAGCAGGGACGCCGTCGCTC...TGCCACGCTGTTGTAAAAACCCAAGTCCCTGTCATTTGAACCTGGATCCAGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344849.4
ENST00000373203.9
CDS-3UTR GCA 90 bp GAGGTGCTGTTGGCCTGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCGGCTGGCTTCCAGCATaGAGAAGGACAGTGACCCCT +
Preference number: 4 (lower is better)
Translates to: EVLLAWLGWPESVSSSPFGWLPA*RRTVTP
Trigger: AGGGGTCACTGTCCTTCTGCATGCTGGAAGCCAGCC...GAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCAGGCCAACAGCACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR GCA 90 bp GAGGTGCTGTTGGCCTGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCATCGAGATCCCCGGGTaGGCAGCTCAGTTCCACCTT +
Preference number: 4 (lower is better)
Translates to: EVLLAWLGWPESVSSSPFIEIPG*AAQFHL
Trigger: AAGGTGGAACTGAGCTGCGCACCCGGGGATCTCGAT...GAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCAGGCCAACAGCACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR GCA 90 bp GTGCTGTTGGCCTGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCCTGTGCACAAAGCTCTGCTaGCCCGGCTCGATGGTGTTG +
Preference number: 4 (lower is better)
Translates to: VLLAWLGWPESVSSSPFLCTKLC*PGSMVL
Trigger: CAACACCATCGAGCCGGGGCAGCAGAGCTTTGTGCA...CAGGAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCAGGCCAACAGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR GCA 90 bp CTGCCCAGCTCAGTTCACCAGTGCTGGATCCAGGTTCAAATGACAGGGACTTGGTTCCAAGCCAGTGGCTaGACTGGCAGCAGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: LPSSVHQCWIQVQMTGTWFQASG*TGSRPL
Trigger: CAGAGGCCTGCTGCCAGTGCAGCCACTGGCTTGGAA...CCAAGTCCCTGTCATTTGAACCTGGATCCAGCACTGGTGAACTGAGCTGGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR GCA 90 bp GGGCTCCATGTGGCAGGAGCTAGGCTCCCAACGCCCACTGTTCTTGCCACCCTCAGCTCAGTTCACCAGTaGTGGATCCAGGTTCAAATG +
Preference number: 4 (lower is better)
Translates to: GLHVAGARLPTPTVLATLSSVHQ*WIQVQM
Trigger: CATTTGAACCTGGATCCAGCACTGGTGAACTGAGCT...GAGGGTGGCAAGAACAGTGGGCGTTGGGAGCCTAGCTCCTGCCACATGGAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp TCCATGTGGCAGGAGCTAGGCTCCCAACGCCCACTGTTCTTGCCACCCTCTGGGAGGTGCCATTTTGCTTaGATGCCTGGAGAGTCAGCT +
Preference number: 4 (lower is better)
Translates to: SMWQELGSQRPLFLPPSGRCHFA*MPGESA
Trigger: AGCTGACTCTCCAGGCATCCAAGCAAAATGGCACCT...CCCAGAGGGTGGCAAGAACAGTGGGCGTTGGGAGCCTAGCTCCTGCCACATGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp AGGTGCTGTTGGCCTGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCCCGGAGGAGGATGCTCTaGGGGTCATTCAGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: RCCWPGWAGLNLFQVLPSRRRML*GSFSSA
Trigger: TGCTGAGCTGAATGACCCCCAGAGCATCCTCCTCCG...GGAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCAGGCCAACAGCACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp CAGGCTCCATTCTGGGTCGAGTGGAGGACTGGCTCCCAGGGTGAGTTCACACCACAGATCTGCATGTTGTaGTTGGCGTCGATGAGCCAG +
Preference number: 4 (lower is better)
Translates to: QAPFWVEWRTGSQGEFTPQICML*LASMSQ
Trigger: CTGGCTCATCGACGCCAACCACAACATGCAGATCTG...TGGTGTGAACTCACCCTGGGAGCCAGTCCTCCACTCGACCCAGAATGGAGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp TGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCCTGCCCAGCTCAGTTGTGCTCCCGATGCTGTaGTTGGTGCTGCTGCTCTCC +
Preference number: 4 (lower is better)
Translates to: WLGWPESVSSSPFLPSSVVLPML*LVLLLS
Trigger: GGAGAGCAGCAGCACCAACCACAGCATCGGGAGCAC...AACTGAGCTGGGCAGGAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp ACTGTTCTTGCCACCCTCTGGGCTCCCAGGCTGGGCTCCGCTAGGCTCCTGTCTGTTTTTACAACAGCGTaGCAAGTGGTCTGTCTCCTG +
Preference number: 4 (lower is better)
Translates to: TVLATLWAPRLGSARLLSVFTTA*QVVCLL
Trigger: CAGGAGACAGACCACTTGCCACGCTGTTGTAAAAAC...AGACAGGAGCCTAGCGGAGCCCAGCCTGGGAGCCCAGAGGGTGGCAAGAACAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR TCA 90 bp GTGCTGGATCCAGGTTCAAATGACAGGGACTTGGGTTTTTACAACAGCGTGGCAGCAGCTCTGTGGTGTTaGCCCCCGGGGGCTCTTGGA +
Preference number: 4 (lower is better)
Translates to: VLDPGSNDRDLGFYNSVAAALWC*PPGALG
Trigger: TCCAAGAGCCCCCGGGGGTCAACACCACAGAGCTGC...TGCCACGCTGTTGTAAAAACCCAAGTCCCTGTCATTTGAACCTGGATCCAGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR TCA 90 bp TGCTGTTGGCCTGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCCTGCAGAAGGTCAGGCCCGTaGTGGTGCACTTCAAATGCG +
Preference number: 4 (lower is better)
Translates to: CCWPGWAGLNLFQVLPSCRRSGP*WCTSNA
Trigger: CGCATTTGAAGTGCACCATCACGGGCCTGACCTTCT...GCAGGAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCAGGCCAACAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR TCA 90 bp TGCTGTTGGCCTGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCCTGCCTGGCTGGGCTGGCCTaGATCTGTTTCAAGTTCTCC +
Preference number: 4 (lower is better)
Translates to: CCWPGWAGLNLFQVLPSCLAGLA*ICFKFS
Trigger: GGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCAG...GCAGGAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCAGGCCAACAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR TCA 90 bp GAGGTGCTGTTGGCCTGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCCTGGCTGGGCTGGCCTaGATCTGTTTCAAGTTCTCC +
Preference number: 4 (lower is better)
Translates to: EVLLAWLGWPESVSSSPFLAGLA*ICFKFS
Trigger: GGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCAG...GAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCAGGCCAACAGCACCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR GCA 90 bp TGGCCTGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCCTGCCCAGCTCATGAAGTGAGACAATaGTGGCCAGCGGTAGCTCCA +
Preference number: 4 (lower is better)
Translates to: WPGWAGLNLFQVLPSCPAHEVRQ*WPAVAP
Trigger: TGGAGCTACCGCTGGCCAGCATTGTCTCACTTCATG...AGCTGGGCAGGAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCAGGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR GCA 90 bp CCATTCTGGGTCGAGTGGAGGACTGGCTCCCAGGGTGAGTTCACACCAGTGCTCTCCATGTTGAGGCAGTaGACCTTTTTCCGCTGTGGT +
Preference number: 4 (lower is better)
Translates to: PFWVEWRTGSQGEFTPVLSMLRQ*TFFRCG
Trigger: ACCACAGCGGAAAAAGGTGCACTGCCTCAACATGGA...GAGCACTGGTGTGAACTCACCCTGGGAGCCAGTCCTCCACTCGACCCAGAATGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR GCA 90 bp TGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCCTGCCCAGCTCAGTTTGCACAAAGCTCTGCTaGCCCGGCTCGATGGTGTTG +
Preference number: 4 (lower is better)
Translates to: WLGWPESVSSSPFLPSSVCTKLC*PGSMVL
Trigger: CAACACCATCGAGCCGGGGCAGCAGAGCTTTGTGCA...AACTGAGCTGGGCAGGAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR GCA 90 bp CTGCCCAGCTCAGTTCACCAGTGCTGGATCCAGGTTCAAATGACAGGGACTTGGCGAGGCCTTTGCTTGTaGAACCAGACAGGTCAGGGC +
Preference number: 4 (lower is better)
Translates to: LPSSVHQCWIQVQMTGTWRGLCL*NQTGQG
Trigger: GCCCTGACCTGTCTGGTTGCACAAGCAAAGGCCTCG...CCAAGTCCCTGTCATTTGAACCTGGATCCAGCACTGGTGAACTGAGCTGGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR GCA 90 bp GTGCTGGATCCAGGTTCAAATGACAGGGACTTGGGTTTTTACAACAGCGTGGCATTCCCAGCGGGGAGGTaGTGTTGGCCTGGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: VLDPGSNDRDLGFYNSVAFPAGR*CWPGWA
Trigger: AGCCCAGCCAGGCCAACAGCACCTCCCCGCTGGGAA...TGCCACGCTGTTGTAAAAACCCAAGTCCCTGTCATTTGAACCTGGATCCAGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR GCA 90 bp GGTAGGCGCGGAGAGCAGGCTCCATTCTGGGTCGAGTGGAGGACTGGCTCCCAGATCAAATCCCAGCTCTaGCTCTTAAAATGCTGGTCA +
Preference number: 4 (lower is better)
Translates to: GRRGEQAPFWVEWRTGSQIKSQL*LLKCWS
Trigger: TGACCAGCATTTTAAGAGGCAGAGCTGGGATTTGAT...CTGGGAGCCAGTCCTCCACTCGACCCAGAATGGAGCCTGCTCTCCGCGCCTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480266.5
CDS-3UTR CCA 90 bp TCCATGTGGCAGGAGCTAGGCTCCCAACGCCCACTGTTCTTGCCACCCTCTGGGTCCAGGAAGAGGACATaGACTTCAAGGATGGCATTG +
Preference number: 4 (lower is better)
Translates to: SMWQELGSQRPLFLPPSGSRKRT*TSRMAL
Trigger: CAATGCCATCCTTGAAGTCCATGTCCTCTTCCTGGA...CCCAGAGGGTGGCAAGAACAGTGGGCGTTGGGAGCCTAGCTCCTGCCACATGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp CAGGCTCCATTCTGGGTCGAGTGGAGGACTGGCTCCCAGGGTGAGTTCACACCATTTTGCTTGGATGCCTaGAGAGTCAGCTCCAGCTGT +
Preference number: 4 (lower is better)
Translates to: QAPFWVEWRTGSQGEFTPFCLDA*RVSSSC
Trigger: ACAGCTGGAGCTGACTCTCCAGGCATCCAAGCAAAA...TGGTGTGAACTCACCCTGGGAGCCAGTCCTCCACTCGACCCAGAATGGAGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp TGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCCTGCCCAGCTCAGTTGGGATTCCCAGGGCCTaGAGATGCAGGAAGACACTG +
Preference number: 4 (lower is better)
Translates to: WLGWPESVSSSPFLPSSVGIPRA*RCRKTL
Trigger: CAGTGTCTTCCTGCATCTCCAGGCCCTGGGAATCCC...AACTGAGCTGGGCAGGAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp CCCAGCTCAGTTCACCAGTGCTGGATCCAGGTTCAAATGACAGGGACTTGGGTTGGCCCATGTCCTGGCTaGCTTCCAGCATGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: PSSVHQCWIQVQMTGTWVGPCPG*LPACRR
Trigger: CCTTCTGCATGCTGGAAGCCAGCCAGGACATGGGCC...AACCCAAGTCCCTGTCATTTGAACCTGGATCCAGCACTGGTGAACTGAGCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp GGGCTCCATGTGGCAGGAGCTAGGCTCCCAACGCCCACTGTTCTTGCCACCCTCAGGAGTATTCTCCAGTaGTCCAGATCTGCATGTTGT +
Preference number: 4 (lower is better)
Translates to: GLHVAGARLPTPTVLATLRSILQ*SRSACC
Trigger: ACAACATGCAGATCTGGACCACTGGAGAATACTCCT...GAGGGTGGCAAGAACAGTGGGCGTTGGGAGCCTAGCTCCTGCCACATGGAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp CAGGCTCCATTCTGGGTCGAGTGGAGGACTGGCTCCCAGGGTGAGTTCACACCATCGGCACACTTTGTCTaGATCAAGGACATGAGCAGC +
Preference number: 4 (lower is better)
Translates to: QAPFWVEWRTGSQGEFTPSAHFV*IKDMSS
Trigger: GCTGCTCATGTCCTTGATCCAGACAAAGTGTGCCGA...TGGTGTGAACTCACCCTGGGAGCCAGTCCTCCACTCGACCCAGAATGGAGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp GGAAGGGTAGGCGCGGAGAGCAGGCTCCATTCTGGGTCGAGTGGAGGACTGGCTCAAATGACAGGGACTTaGGTTTTTACAACAGCGTGG +
Preference number: 4 (lower is better)
Translates to: GRVGAESRLHSGSSGGLAQMTGT*VFTTAW
Trigger: CCACGCTGTTGTAAAAACCCAAGTCCCTGTCATTTG...AGCCAGTCCTCCACTCGACCCAGAATGGAGCCTGCTCTCCGCGCCTACCCTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp ACTGTTCTTGCCACCCTCTGGGCTCCCAGGCTGGGCTCCGCTAGGCTCCTGTCTTCAGTTCACCAGTGCTaGATCCAGGTTCAAATGACA +
Preference number: 4 (lower is better)
Translates to: TVLATLWAPRLGSARLLSSVHQC*IQVQMT
Trigger: TGTCATTTGAACCTGGATCCAGCACTGGTGAACTGA...AGACAGGAGCCTAGCGGAGCCCAGCCTGGGAGCCCAGAGGGTGGCAAGAACAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp GGCAGAGGGGGCTCCATGTGGCAGGAGCTAGGCTCCCAACGCCCACTGTTCTTGTCAGTTCACCAGTGCTaGATCCAGGTTCAAATGACA +
Preference number: 4 (lower is better)
Translates to: GRGGSMWQELGSQRPLFLSVHQC*IQVQMT
Trigger: TGTCATTTGAACCTGGATCCAGCACTGGTGAACTGA...CAAGAACAGTGGGCGTTGGGAGCCTAGCTCCTGCCACATGGAGCCCCCTCTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp GGAAGGGTAGGCGCGGAGAGCAGGCTCCATTCTGGGTCGAGTGGAGGACTGGCTTCAGTTCACCAGTGCTaGATCCAGGTTCAAATGACA +
Preference number: 4 (lower is better)
Translates to: GRVGAESRLHSGSSGGLASVHQC*IQVQMT
Trigger: TGTCATTTGAACCTGGATCCAGCACTGGTGAACTGA...AGCCAGTCCTCCACTCGACCCAGAATGGAGCCTGCTCTCCGCGCCTACCCTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp GTGCTGTTGGCCTGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCCTGTGCTGTTGGCCTGGCTaGGCTGGCCTGAATCTGTTT +
Preference number: 4 (lower is better)
Translates to: VLLAWLGWPESVSSSPFLCCWPG*AGLNLF
Trigger: AAACAGATTCAGGCCAGCCCAGCCAGGCCAACAGCA...CAGGAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCAGGCCAACAGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp CAGGCTCCATTCTGGGTCGAGTGGAGGACTGGCTCCCAGGGTGAGTTCACACCATCCCATCATGCTTACTaGGAGCCTAGGCAGCTTTAC +
Preference number: 4 (lower is better)
Translates to: QAPFWVEWRTGSQGEFTPSHHAY*EPRQLY
Trigger: GTAAAGCTGCCTAGGCTCCCAGTAAGCATGATGGGA...TGGTGTGAACTCACCCTGGGAGCCAGTCCTCCACTCGACCCAGAATGGAGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480266.5
CDS-3UTR CCA 90 bp GAGGTGCTGTTGGCCTGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCTGGAGCCAGATGGCCTaGATCAAATCCCAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: EVLLAWLGWPESVSSSPFWSQMA*IKSQLC
Trigger: GCAGAGCTGGGATTTGATCCAGGCCATCTGGCTCCA...GAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCAGGCCAACAGCACCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480266.5
CDS-3UTR TCA 90 bp CCCAGCTCAGTTCACCAGTGCTGGATCCAGGTTCAAATGACAGGGACTTGGGTTTCGGGGCCCACAGGCTaGAGGTCACAATGGACTGTT +
Preference number: 4 (lower is better)
Translates to: PSSVHQCWIQVQMTGTWVSGPTG*RSQWTV
Trigger: AACAGTCCATTGTGACCTTCAGCCTGTGGGCCCCGA...AACCCAAGTCCCTGTCATTTGAACCTGGATCCAGCACTGGTGAACTGAGCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR TCA 90 bp TCCATGTGGCAGGAGCTAGGCTCCCAACGCCCACTGTTCTTGCCACCCTCTGGGTCTCTGGAAAGATCTTaGAGGAGTATTCTCCAGTGG +
Preference number: 4 (lower is better)
Translates to: SMWQELGSQRPLFLPPSGSLERS*RSILQW
Trigger: CCACTGGAGAATACTCCTTCAAGATCTTTCCAGAGA...CCCAGAGGGTGGCAAGAACAGTGGGCGTTGGGAGCCTAGCTCCTGCCACATGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR TCA 90 bp TGCTGTTGGCCTGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCCTGCCCACCGCCTCATTGCTaGTCATACTTGCTGACACCT +
Preference number: 4 (lower is better)
Translates to: CCWPGWAGLNLFQVLPSCPPPHC*SYLLTP
Trigger: AGGTGTCAGCAAGTATGATCAGCAATGAGGCGGTGG...GCAGGAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCAGGCCAACAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR TCA 90 bp AGGTGCTGTTGGCCTGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCCCCACCGCCTCATTGCTaGTCATACTTGCTGACACCT +
Preference number: 4 (lower is better)
Translates to: RCCWPGWAGLNLFQVLPSPPPHC*SYLLTP
Trigger: AGGTGTCAGCAAGTATGATCAGCAATGAGGCGGTGG...GGAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCAGGCCAACAGCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR TCA 90 bp AGGTGCTGTTGGCCTGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCCAGAGGCTGTCCATGTTaGGGCAGTGCACCTTTTTCC +
Preference number: 4 (lower is better)
Translates to: RCCWPGWAGLNLFQVLPSRGCPC*GSAPFS
Trigger: GGAAAAAGGTGCACTGCCTCAACATGGACAGCCTCT...GGAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCAGGCCAACAGCACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR GCA 90 bp TGGATCCAGGTTCAAATGACAGGGACTTGGGTTTTTACAACAGCGTGGCAAGTGGGTGCGGGTGAGGTCTaGAGCCTACCACCGCAGCTG +
Preference number: 4 (lower is better)
Translates to: WIQVQMTGTWVFTTAWQVGAGEV*SLPPQL
Trigger: CAGCTGCGGTGGTAGGCTGCAGACCTCACCCGCACC...CACTTGCCACGCTGTTGTAAAAACCCAAGTCCCTGTCATTTGAACCTGGATCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR GCA 90 bp AGCTCAGTTCACCAGTGCTGGATCCAGGTTCAAATGACAGGGACTTGGGTTTTTCTCCCAGCTGGCGGCTaGTCAGTCTCTCCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: SSVHQCWIQVQMTGTWVFLPAGG*SVSPAG
Trigger: CCCAGCAGGAGAGACTGAGCAGCCGCCAGCTGGGAG...AAAAACCCAAGTCCCTGTCATTTGAACCTGGATCCAGCACTGGTGAACTGAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR GCA 90 bp GAGGTGCTGTTGGCCTGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCCAAGTTCTCCCTTCCTaGCCAGCTCAGTTCACCAGT +
Preference number: 4 (lower is better)
Translates to: EVLLAWLGWPESVSSSPFQVLPS*PAQFTS
Trigger: ACTGGTGAACTGAGCTGGGCAGGAAGGGAGAACTTG...GAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCAGGCCAACAGCACCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR GCA 90 bp TGCTGTTGGCCTGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCCTGCCAAGTTCTCCCTTCCTaGCCAGCTCAGTTCACCAGT +
Preference number: 4 (lower is better)
Translates to: CCWPGWAGLNLFQVLPSCQVLPS*PAQFTS
Trigger: ACTGGTGAACTGAGCTGGGCAGGAAGGGAGAACTTG...GCAGGAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCAGGCCAACAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR GCA 90 bp GTGCTGTTGGCCTGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCCTGGGCTCCTGTCTCCCCTaGCAGTTAGTTAGGCAAGTT +
Preference number: 4 (lower is better)
Translates to: VLLAWLGWPESVSSSPFLGSCLP*QLVRQV
Trigger: AACTTGCCTAACTAACTGGCAGGGGAGACAGGAGCC...CAGGAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCAGGCCAACAGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR GCA 90 bp ACTGTTCTTGCCACCCTCTGGGCTCCCAGGCTGGGCTCCGCTAGGCTCCTGTCTAATAATCACTGCAGATaGTCCCATCATGCTTACTGG +
Preference number: 4 (lower is better)
Translates to: TVLATLWAPRLGSARLLSNNHCR*SHHAYW
Trigger: CCAGTAAGCATGATGGGAGCATCTGCAGTGATTATT...AGACAGGAGCCTAGCGGAGCCCAGCCTGGGAGCCCAGAGGGTGGCAAGAACAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480266.5
CDS-3UTR GCA 90 bp ACTGTTCTTGCCACCCTCTGGGCTCCCAGGCTGGGCTCCGCTAGGCTCCTGTCTACAATGGACTGTTTCTaGAAGACCTTGGAGGATGAT +
Preference number: 4 (lower is better)
Translates to: TVLATLWAPRLGSARLLSTMDCF*KTLEDD
Trigger: ATCATCCTCCAAGGTCTTGCAGAAACAGTCCATTGT...AGACAGGAGCCTAGCGGAGCCCAGCCTGGGAGCCCAGAGGGTGGCAAGAACAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480266.5
CDS-3UTR CCA 90 bp AGCTCAGTTCACCAGTGCTGGATCCAGGTTCAAATGACAGGGACTTGGGTTTTTACAGGGACGCGGGGCTaGGCTGGAGTTGCTGTCCGA +
Preference number: 4 (lower is better)
Translates to: SSVHQCWIQVQMTGTWVFTGTRG*AGVAVR
Trigger: TCGGACAGCAACTCCAGCCCAGCCCCGCGTCCCTGT...AAAAACCCAAGTCCCTGTCATTTGAACCTGGATCCAGCACTGGTGAACTGAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344849.4
ENST00000373203.9
CDS-3UTR CCA 90 bp AGGTGCTGTTGGCCTGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCCCAGCCCTTCGAGACCTaGCTAGTGGTATATGTCACC +
Preference number: 4 (lower is better)
Translates to: RCCWPGWAGLNLFQVLPSQPFET*LVVYVT
Trigger: GGTGACATATACCACTAGCCAGGTCTCGAAGGGCTG...GGAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCAGGCCAACAGCACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp CCCAGCTCAGTTCACCAGTGCTGGATCCAGGTTCAAATGACAGGGACTTGGGTTGGGATTCCCAGGGCCTaGAGATGCAGGAAGACACTG +
Preference number: 4 (lower is better)
Translates to: PSSVHQCWIQVQMTGTWVGIPRA*RCRKTL
Trigger: CAGTGTCTTCCTGCATCTCCAGGCCCTGGGAATCCC...AACCCAAGTCCCTGTCATTTGAACCTGGATCCAGCACTGGTGAACTGAGCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp TGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCCTGCCCAGCTCAGTTGGTCTTGGGGAAGGATaGCAGCTCTGTGGTGTTGAC +
Preference number: 4 (lower is better)
Translates to: WLGWPESVSSSPFLPSSVGLGEG*QLCGVD
Trigger: GTCAACACCACAGAGCTGCCATCCTTCCCCAAGACC...AACTGAGCTGGGCAGGAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp GTGCTGGATCCAGGTTCAAATGACAGGGACTTGGGTTTTTACAACAGCGTGGCAAGTGACCCCTGGGCTTaGCCCAGTCGGAGGAGGATG +
Preference number: 4 (lower is better)
Translates to: VLDPGSNDRDLGFYNSVASDPWA*PSRRRM
Trigger: CATCCTCCTCCGACTGGGCCAAGCCCAGGGGTCACT...TGCCACGCTGTTGTAAAAACCCAAGTCCCTGTCATTTGAACCTGGATCCAGCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp AGCTCAGTTCACCAGTGCTGGATCCAGGTTCAAATGACAGGGACTTGGGTTTTTGCCACGCCTTCCAAGTaGCAGCCCCGGACCAAGGCT +
Preference number: 4 (lower is better)
Translates to: SSVHQCWIQVQMTGTWVFATPSK*QPRTKA
Trigger: AGCCTTGGTCCGGGGCTGCCACTTGGAAGGCGTGGC...AAAAACCCAAGTCCCTGTCATTTGAACCTGGATCCAGCACTGGTGAACTGAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp TGCTGTTGGCCTGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCCTGCCAGATCTGCATGTTGTaGTTGGCGTCGATGAGCCAG +
Preference number: 4 (lower is better)
Translates to: CCWPGWAGLNLFQVLPSCQICML*LASMSQ
Trigger: CTGGCTCATCGACGCCAACCACAACATGCAGATCTG...GCAGGAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCAGGCCAACAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp GAGGTGCTGTTGGCCTGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCGCCTTGAGGTGTGTCTaGGAGCTTGAAGCCACGAAT +
Preference number: 4 (lower is better)
Translates to: EVLLAWLGWPESVSSSPFALRCV*ELEATN
Trigger: ATTCGTGGCTTCAAGCTCCCAGACACACCTCAAGGC...GAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCAGGCCAACAGCACCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp TGCTGTTGGCCTGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCCTGCTTAGTACCAGGGTCATaGCGTCGTCGGCACACTTTG +
Preference number: 4 (lower is better)
Translates to: CCWPGWAGLNLFQVLPSCLVPGS*RRRHTL
Trigger: CAAAGTGTGCCGACGACGCCATGACCCTGGTACTAA...GCAGGAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCAGGCCAACAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp CTGCCCAGCTCAGTTCACCAGTGCTGGATCCAGGTTCAAATGACAGGGACTTGGTGGCAGCTGTCTAACTaGAGCAGGAACTCGGAGACG +
Preference number: 4 (lower is better)
Translates to: LPSSVHQCWIQVQMTGTWWQLSN*SRNSET
Trigger: CGTCTCCGAGTTCCTGCTCCAGTTAGACAGCTGCCA...CCAAGTCCCTGTCATTTGAACCTGGATCCAGCACTGGTGAACTGAGCTGGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp GTGCTGGATCCAGGTTCAAATGACAGGGACTTGGGTTTTTACAACAGCGTGGCAGGTGTTCCAAGCCAGTaGCTGCACTGGCAGCAGGCC +
Preference number: 4 (lower is better)
Translates to: VLDPGSNDRDLGFYNSVAGVPSQ*LHWQQA
Trigger: GGCCTGCTGCCAGTGCAGCCACTGGCTTGGAACACC...TGCCACGCTGTTGTAAAAACCCAAGTCCCTGTCATTTGAACCTGGATCCAGCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp GGAGAGCAGGCTCCATTCTGGGTCGAGTGGAGGACTGGCTCCCAGGGTGAGTTCCAAATGACAGGGACTTaGGTTTTTACAACAGCGTGG +
Preference number: 4 (lower is better)
Translates to: GEQAPFWVEWRTGSQGEFQMTGT*VFTTAW
Trigger: CCACGCTGTTGTAAAAACCCAAGTCCCTGTCATTTG...GAACTCACCCTGGGAGCCAGTCCTCCACTCGACCCAGAATGGAGCCTGCTCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp CTGCCCAGCTCAGTTCACCAGTGCTGGATCCAGGTTCAAATGACAGGGACTTGGTGCTGTTGGCCTGGCTaGGCTGGCCTGAATCTGTTT +
Preference number: 4 (lower is better)
Translates to: LPSSVHQCWIQVQMTGTWCCWPG*AGLNLF
Trigger: AAACAGATTCAGGCCAGCCCAGCCAGGCCAACAGCA...CCAAGTCCCTGTCATTTGAACCTGGATCCAGCACTGGTGAACTGAGCTGGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp GTGCTGGATCCAGGTTCAAATGACAGGGACTTGGGTTTTTACAACAGCGTGGCACAGGTGGCTCTGGGCTaGGCCCTCTTCTCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: VLDPGSNDRDLGFYNSVAQVALG*ALFSSQ
Trigger: CTGGGAAGAGAAGAGGGCCCAGCCCAGAGCCACCTG...TGCCACGCTGTTGTAAAAACCCAAGTCCCTGTCATTTGAACCTGGATCCAGCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR TCA 90 bp CCATTCTGGGTCGAGTGGAGGACTGGCTCCCAGGGTGAGTTCACACCAGTGCTCCAAGACCTTGGAGGATaGTCAAGAAAAACAGCTCTG +
Preference number: 4 (lower is better)
Translates to: PFWVEWRTGSQGEFTPVLQDLGG*SRKTAL
Trigger: CAGAGCTGTTTTTCTTGATCATCCTCCAAGGTCTTG...GAGCACTGGTGTGAACTCACCCTGGGAGCCAGTCCTCCACTCGACCCAGAATGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480266.5
CDS-3UTR GCA 90 bp GGGCTCCATGTGGCAGGAGCTAGGCTCCCAACGCCCACTGTTCTTGCCACCCTCATGGTGCACTTCAAATaGGCAACAAGCTCTTTCTTT +
Preference number: 4 (lower is better)
Translates to: GLHVAGARLPTPTVLATLMVHFK*ATSSFF
Trigger: AAAGAAAGAGCTTGTTGCGCATTTGAAGTGCACCAT...GAGGGTGGCAAGAACAGTGGGCGTTGGGAGCCTAGCTCCTGCCACATGGAGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR GCA 90 bp GAGGTGCTGTTGGCCTGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCTCCATGTTGAGGCAGTaGACCTTTTTCCGCTGTGGT +
Preference number: 4 (lower is better)
Translates to: EVLLAWLGWPESVSSSPFSMLRQ*TFFRCG
Trigger: ACCACAGCGGAAAAAGGTGCACTGCCTCAACATGGA...GAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCAGGCCAACAGCACCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR GCA 90 bp GTGCTGGATCCAGGTTCAAATGACAGGGACTTGGGTTTTTACAACAGCGTGGCAAACGCCCACTGTTCTTaGCACCCTCTGGGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: VLDPGSNDRDLGFYNSVANAHCS*HPLGSQ
Trigger: CTGGGAGCCCAGAGGGTGGCAAGAACAGTGGGCGTT...TGCCACGCTGTTGTAAAAACCCAAGTCCCTGTCATTTGAACCTGGATCCAGCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp AGGTGCTGTTGGCCTGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCCAGGTGCCATTTTGCTTaGATGCCTGGAGAGTCAGCT +
Preference number: 4 (lower is better)
Translates to: RCCWPGWAGLNLFQVLPSRCHFA*MPGESA
Trigger: AGCTGACTCTCCAGGCATCCAAGCAAAATGGCACCT...GGAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCAGGCCAACAGCACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp GTGCTGGATCCAGGTTCAAATGACAGGGACTTGGGTTTTTACAACAGCGTGGCAGTAGGCCAAGTGCAGTaGGATTCCCAGGGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: VLDPGSNDRDLGFYNSVAVGQVQ*DSQGLE
Trigger: CTCCAGGCCCTGGGAATCCCACTGCACTTGGCCTAC...TGCCACGCTGTTGTAAAAACCCAAGTCCCTGTCATTTGAACCTGGATCCAGCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp TGGATCCAGGTTCAAATGACAGGGACTTGGGTTTTTACAACAGCGTGGCAAGTGATGTGCGCCTCCTTGTaGCCGGCCACGCCTTCCAAG +
Preference number: 4 (lower is better)
Translates to: WIQVQMTGTWVFTTAWQVMCASL*PATPSK
Trigger: CTTGGAAGGCGTGGCCGGCCACAAGGAGGCGCACAT...CACTTGCCACGCTGTTGTAAAAACCCAAGTCCCTGTCATTTGAACCTGGATCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp TGGATCCAGGTTCAAATGACAGGGACTTGGGTTTTTACAACAGCGTGGCAAGTGCCTCTGCCTCACAGCTaGGGTCCCAGAAGGTCAGGC +
Preference number: 4 (lower is better)
Translates to: WIQVQMTGTWVFTTAWQVPLPHS*GPRRSG
Trigger: GCCTGACCTTCTGGGACCCCAGCTGTGAGGCAGAGG...CACTTGCCACGCTGTTGTAAAAACCCAAGTCCCTGTCATTTGAACCTGGATCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp TGGCCTGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCCTGCCCAGCTTGCCGGTTTTGGGTATaGGTACTGTGTAGAAGTGGA +
Preference number: 4 (lower is better)
Translates to: WPGWAGLNLFQVLPSCPACRFWV*VLCRSG
Trigger: TCCACTTCTACACAGTACCCATACCCAAAACCGGCA...AGCTGGGCAGGAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCAGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp GTGCTGGATCCAGGTTCAAATGACAGGGACTTGGGTTTTTACAACAGCGTGGCAGTGCTCCCGATGCTGTaGTTGGTGCTGCTGCTCTCC +
Preference number: 4 (lower is better)
Translates to: VLDPGSNDRDLGFYNSVAVLPML*LVLLLS
Trigger: GGAGAGCAGCAGCACCAACCACAGCATCGGGAGCAC...TGCCACGCTGTTGTAAAAACCCAAGTCCCTGTCATTTGAACCTGGATCCAGCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp TGGCCTGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCCTGCCCAGCTGTTTTTACAACAGCGTaGCAAGTGGTCTGTCTCCTG +
Preference number: 4 (lower is better)
Translates to: WPGWAGLNLFQVLPSCPAVFTTA*QVVCLL
Trigger: CAGGAGACAGACCACTTGCCACGCTGTTGTAAAAAC...AGCTGGGCAGGAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCAGGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp GTGCTGTTGGCCTGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCCTGCAAGAAAAACAGCTCTaGAGCCAGATGGCCTGGATC +
Preference number: 4 (lower is better)
Translates to: VLLAWLGWPESVSSSPFLQEKQL*SQMAWI
Trigger: GATCCAGGCCATCTGGCTCCAGAGCTGTTTTTCTTG...CAGGAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCAGGCCAACAGCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480266.5
CDS-3UTR TCA 90 bp TGGATCCAGGTTCAAATGACAGGGACTTGGGTTTTTACAACAGCGTGGCAAGTGTGGACTTCCTGGTCTTaGGACCCGGTCTTGGGACGC +
Preference number: 4 (lower is better)
Translates to: WIQVQMTGTWVFTTAWQVWTSWS*DPVLGR
Trigger: GCGTCCCAAGACCGGGTCTCAAGACCAGGAAGTCCA...CACTTGCCACGCTGTTGTAAAAACCCAAGTCCCTGTCATTTGAACCTGGATCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp TGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCCTGCCCAGCTCAGTTTTTTGCTTGGATGCCTaGAGAGTCAGCTCCAGCTGT +
Preference number: 4 (lower is better)
Translates to: WLGWPESVSSSPFLPSSVFCLDA*RVSSSC
Trigger: ACAGCTGGAGCTGACTCTCCAGGCATCCAAGCAAAA...AACTGAGCTGGGCAGGAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCA
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp CCCAGCTCAGTTCACCAGTGCTGGATCCAGGTTCAAATGACAGGGACTTGGGTTTTAGTACCAGGGTCATaGCGTCGTCGGCACACTTTG +
Preference number: 4 (lower is better)
Translates to: PSSVHQCWIQVQMTGTWVLVPGS*RRRHTL
Trigger: CAAAGTGTGCCGACGACGCCATGACCCTGGTACTAA...AACCCAAGTCCCTGTCATTTGAACCTGGATCCAGCACTGGTGAACTGAGCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR TCA 90 bp AGCTCAGTTCACCAGTGCTGGATCCAGGTTCAAATGACAGGGACTTGGGTTTTTCGGATGGGGACACTCTaGCCTGCACAAAGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: SSVHQCWIQVQMTGTWVFRMGTL*PAQSSA
Trigger: AGCAGAGCTTTGTGCAGGTCAGAGTGTCCCCATCCG...AAAAACCCAAGTCCCTGTCATTTGAACCTGGATCCAGCACTGGTGAACTGAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR GCA 90 bp AGCTCAGTTCACCAGTGCTGGATCCAGGTTCAAATGACAGGGACTTGGGTTTTTCCTCTCGGGGCCAGGTaGCATTTTGCTTGGATGCCT +
Preference number: 4 (lower is better)
Translates to: SSVHQCWIQVQMTGTWVFPLGAR*HFAWMP
Trigger: AGGCATCCAAGCAAAATGGCACCTGGCCCCGAGAGG...AAAAACCCAAGTCCCTGTCATTTGAACCTGGATCCAGCACTGGTGAACTGAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp CTGCCCAGCTCAGTTCACCAGTGCTGGATCCAGGTTCAAATGACAGGGACTTGGTCCAGGAAGAGGACATaGACTTCAAGGATGGCATTG +
Preference number: 4 (lower is better)
Translates to: LPSSVHQCWIQVQMTGTWSRKRT*TSRMAL
Trigger: CAATGCCATCCTTGAAGTCCATGTCCTCTTCCTGGA...CCAAGTCCCTGTCATTTGAACCTGGATCCAGCACTGGTGAACTGAGCTGGGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp GTGCTGGATCCAGGTTCAAATGACAGGGACTTGGGTTTTTACAACAGCGTGGCAGCCTACCACCGCAGCTaGAGGCATGAAGTGAGACAA +
Preference number: 4 (lower is better)
Translates to: VLDPGSNDRDLGFYNSVAAYHRS*RHEVRQ
Trigger: TTGTCTCACTTCATGCCTCCAGCTGCGGTGGTAGGC...TGCCACGCTGTTGTAAAAACCCAAGTCCCTGTCATTTGAACCTGGATCCAGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp TGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCCTGCCCAGCTCAGTTTGCCGGTTTTGGGTATaGGTACTGTGTAGAAGTGGA +
Preference number: 4 (lower is better)
Translates to: WLGWPESVSSSPFLPSSVCRFWV*VLCRSG
Trigger: TCCACTTCTACACAGTACCCATACCCAAAACCGGCA...AACTGAGCTGGGCAGGAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp GTGCTGGATCCAGGTTCAAATGACAGGGACTTGGGTTTTTACAACAGCGTGGCAAAGTGGTCTGTCTCCTaGGCAGCCATATCCCAGACC +
Preference number: 4 (lower is better)
Translates to: VLDPGSNDRDLGFYNSVAKWSVS*AAISQT
Trigger: GGTCTGGGATATGGCTGCCCAGGAGACAGACCACTT...TGCCACGCTGTTGTAAAAACCCAAGTCCCTGTCATTTGAACCTGGATCCAGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR TCA 90 bp AGCTCAGTTCACCAGTGCTGGATCCAGGTTCAAATGACAGGGACTTGGGTTTTTTCTGGATCAAGGACATaGGCAGCTCCGGGCTACAAG +
Preference number: 4 (lower is better)
Translates to: SSVHQCWIQVQMTGTWVFSGSRT*AAPGYK
Trigger: CTTGTAGCCCGGAGCTGCTCATGTCCTTGATCCAGA...AAAAACCCAAGTCCCTGTCATTTGAACCTGGATCCAGCACTGGTGAACTGAGCT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR TCA 90 bp AGCTCAGTTCACCAGTGCTGGATCCAGGTTCAAATGACAGGGACTTGGGTTTTTAGAAGGTCAGGCCCGTaGTGGTGCACTTCAAATGCG +
Preference number: 4 (lower is better)
Translates to: SSVHQCWIQVQMTGTWVFRRSGP*WCTSNA
Trigger: CGCATTTGAAGTGCACCATCACGGGCCTGACCTTCT...AAAAACCCAAGTCCCTGTCATTTGAACCTGGATCCAGCACTGGTGAACTGAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR TCA 90 bp CTGCCCAGCTCAGTTCACCAGTGCTGGATCCAGGTTCAAATGACAGGGACTTGGGGATCCAGGTTCAAATaGCAGGGACTTGGGTTTTTA +
Preference number: 4 (lower is better)
Translates to: LPSSVHQCWIQVQMTGTWGSRFK*QGLGFL
Trigger: TAAAAACCCAAGTCCCTGTCATTTGAACCTGGATCC...CCAAGTCCCTGTCATTTGAACCTGGATCCAGCACTGGTGAACTGAGCTGGGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR GCA 90 bp TGGCCTGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCCTGCCCAGCTATGGTGCACTTCAAATaGGCAACAAGCTCTTTCTTT +
Preference number: 4 (lower is better)
Translates to: WPGWAGLNLFQVLPSCPAMVHFK*ATSSFF
Trigger: AAAGAAAGAGCTTGTTGCGCATTTGAAGTGCACCAT...AGCTGGGCAGGAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCAGGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR GCA 90 bp AGGTGCTGTTGGCCTGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCCCTCAGTTTCCCCATTTaGAGACCACCAATAATCACT +
Preference number: 4 (lower is better)
Translates to: RCCWPGWAGLNLFQVLPSLSFPI*RPPIIT
Trigger: AGTGATTATTGGTGGTCTGCAAATGGGGAAACTGAG...GGAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCAGGCCAACAGCACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480266.5
CDS-3UTR CCA 90 bp CTGCCCAGCTCAGTTCACCAGTGCTGGATCCAGGTTCAAATGACAGGGACTTGGAGGAGTATTCTCCAGTaGTCCAGATCTGCATGTTGT +
Preference number: 4 (lower is better)
Translates to: LPSSVHQCWIQVQMTGTWRSILQ*SRSACC
Trigger: ACAACATGCAGATCTGGACCACTGGAGAATACTCCT...CCAAGTCCCTGTCATTTGAACCTGGATCCAGCACTGGTGAACTGAGCTGGGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CCA 90 bp TGGATCCAGGTTCAAATGACAGGGACTTGGGTTTTTACAACAGCGTGGCAAGTGCCTGCATGCCACAGCTaGAGTAAGCACTGCGCAAGA +
Preference number: 4 (lower is better)
Translates to: WIQVQMTGTWVFTTAWQVPACHS*SKHCAR
Trigger: TCTTGCGCAGTGCTTACTCCAGCTGTGGCATGCAGG...CACTTGCCACGCTGTTGTAAAAACCCAAGTCCCTGTCATTTGAACCTGGATCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR TCA 90 bp CCCAGCTCAGTTCACCAGTGCTGGATCCAGGTTCAAATGACAGGGACTTGGGTTTCTCTGGAAAGATCTTaGAGGAGTATTCTCCAGTGG +
Preference number: 4 (lower is better)
Translates to: PSSVHQCWIQVQMTGTWVSLERS*RSILQW
Trigger: CCACTGGAGAATACTCCTTCAAGATCTTTCCAGAGA...AACCCAAGTCCCTGTCATTTGAACCTGGATCCAGCACTGGTGAACTGAGCTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR TCA 90 bp CCCAGCTCAGTTCACCAGTGCTGGATCCAGGTTCAAATGACAGGGACTTGGGTTGGATCCAGGTTCAAATaGCAGGGACTTGGGTTTTTA +
Preference number: 4 (lower is better)
Translates to: PSSVHQCWIQVQMTGTWVGSRFK*QGLGFL
Trigger: TAAAAACCCAAGTCCCTGTCATTTGAACCTGGATCC...AACCCAAGTCCCTGTCATTTGAACCTGGATCCAGCACTGGTGAACTGAGCTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR TCA 90 bp TGCTGTTGGCCTGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCCTGCACTGGTTTCATGGTCTaGTTTATTGGTGGTGAATAC +
Preference number: 4 (lower is better)
Translates to: CCWPGWAGLNLFQVLPSCTGFMV*FIGGEY
Trigger: GTATTCACCACCAATAAATCAGACCATGAAACCAGT...GCAGGAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCAGGCCAACAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480266.5
CDS-3UTR CCA 90 bp AGGTGCTGTTGGCCTGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCCGTTTCTGCAAGACCTTaGAGGATGATCAAGAAAAAC +
Preference number: 4 (lower is better)
Translates to: RCCWPGWAGLNLFQVLPSVSARP*RMIKKN
Trigger: GTTTTTCTTGATCATCCTCCAAGGTCTTGCAGAAAC...GGAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCAGGCCAACAGCACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480266.5
CDS-3UTR CCA 90 bp GTGCTGGATCCAGGTTCAAATGACAGGGACTTGGGTTTTTACAACAGCGTGGCAGTTTTTACAACAGCGTaGCAAGTGGTCTGTCTCCTG +
Preference number: 4 (lower is better)
Translates to: VLDPGSNDRDLGFYNSVAVFTTA*QVVCLL
Trigger: CAGGAGACAGACCACTTGCCACGCTGTTGTAAAAAC...TGCCACGCTGTTGTAAAAACCCAAGTCCCTGTCATTTGAACCTGGATCCAGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR TCA 90 bp GTGCTGGATCCAGGTTCAAATGACAGGGACTTGGGTTTTTACAACAGCGTGGCAGGATCCAGGTTCAAATaGCAGGGACTTGGGTTTTTA +
Preference number: 4 (lower is better)
Translates to: VLDPGSNDRDLGFYNSVAGSRFK*QGLGFL
Trigger: TAAAAACCCAAGTCCCTGTCATTTGAACCTGGATCC...TGCCACGCTGTTGTAAAAACCCAAGTCCCTGTCATTTGAACCTGGATCCAGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR GCA 90 bp AGCTCAGTTCACCAGTGCTGGATCCAGGTTCAAATGACAGGGACTTGGGTTTTTAGCTCAGTTCACCAGTaGTGGATCCAGGTTCAAATG +
Preference number: 4 (lower is better)
Translates to: SSVHQCWIQVQMTGTWVFSSVHQ*WIQVQM
Trigger: CATTTGAACCTGGATCCAGCACTGGTGAACTGAGCT...AAAAACCCAAGTCCCTGTCATTTGAACCTGGATCCAGCACTGGTGAACTGAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR GCA 90 bp AGCTCAGTTCACCAGTGCTGGATCCAGGTTCAAATGACAGGGACTTGGGTTTTTACCACCAATAATCACTaGAGATGCTCCCATCATGCT +
Preference number: 4 (lower is better)
Translates to: SSVHQCWIQVQMTGTWVFTTNNH*RCSHHA
Trigger: AGCATGATGGGAGCATCTGCAGTGATTATTGGTGGT...AAAAACCCAAGTCCCTGTCATTTGAACCTGGATCCAGCACTGGTGAACTGAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480266.5
CDS-3UTR GCA 90 bp GTGCTGGATCCAGGTTCAAATGACAGGGACTTGGGTTTTTACAACAGCGTGGCAATGGTGCACTTCAAATaGGCAACAAGCTCTTTCTTT +
Preference number: 4 (lower is better)
Translates to: VLDPGSNDRDLGFYNSVAMVHFK*ATSSFF
Trigger: AAAGAAAGAGCTTGTTGCGCATTTGAAGTGCACCAT...TGCCACGCTGTTGTAAAAACCCAAGTCCCTGTCATTTGAACCTGGATCCAGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS GCA 90 bp ACCGTCCGGGGCCCGGCCGAGTGGCCCGGCAGGACCCTCAGGATGTaGGCCTCCTTGTGGCCGGCCACGCCTTCCAAGTGGCAGCCCCGG +
Preference number: 5 (lower is better)
Translates to: TVRGPAEWPGRTLRM*ASLWPATPSKWQPR
Trigger: CCGGGGCTGCCACTTGGAAGGCGTGGCCGGCCACAAGGAGGCGCACATCCTGAGGGTCCTGCCGGGCCACTCGGCCGGGCCCCGGACGGT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CAA 90 bp GCTGCTGCTCTCCGAGGAGGCCGGGGCAGCCACCGCCACCACGGGCTCCCGCTTAGCGGGGAGGTGCTGTaGGCCTGGCTGGGCTGGCCT +
Preference number: 5 (lower is better)
Translates to: AAALRGGRGSHRHHGLPLSGEVL*AWLGWP
Trigger: AGGCCAGCCCAGCCAGGCCAACAGCACCTCCCCGCT...AAGCGGGAGCCCGTGGTGGCGGTGGCTGCCCCGGCCTCCTCGGAGAGCAGCAGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344849.4
CDS CCA 90 bp CCGGCCGAGTGGCCCGGCAGGACCCTCAGGATGTGCGCCTCCTTGTaGCCGGCCACGCCTTCCAAGTGGCAGCCCCGGACCAAGGCTGGA +
Preference number: 5 (lower is better)
Translates to: PAEWPGRTLRMCASL*PATPSKWQPRTKAG
Trigger: TCCAGCCTTGGTCCGGGGCTGCCACTTGGAAGGCGTGGCCGGCCACAAGGAGGCGCACATCCTGAGGGTCCTGCCGGGCCACTCGGCCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CAA 90 bp GTGGTTGGTGCTGCTGCTCTCCGAGGAGGCCGGGGCAGCCACCGCCACCACGGGAGGATGTGCGCCTCCTaGTGGCCGGCCACGCCTTCC +
Preference number: 5 (lower is better)
Translates to: VVGAAALRGGRGSHRHHGRMCAS*WPATPS
Trigger: GGAAGGCGTGGCCGGCCACAAGGAGGCGCACATCCT...CCCGTGGTGGCGGTGGCTGCCCCGGCCTCCTCGGAGAGCAGCAGCACCAACCAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344849.4
CDS CCA 90 bp CTTGTGGCCGGCCACGCCTTCCAAGTGGCAGCCCCGGACCAAGGCTaGAGTACGCGGCCGCCACTCGAGCGTGCGGCCCATGTCCTGGCT +
Preference number: 5 (lower is better)
Translates to: LVAGHAFQVAAPDQG*STRPPLERAAHVLA
Trigger: AGCCAGGACATGGGCCGCACGCTCGAGTGGCGGCCGCGTACTCCAGCCTTGGTCCGGGGCTGCCACTTGGAAGGCGTGGCCGGCCACAAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS CCA 90 bp ACCCTCAGGATGTGCGCCTCCTTGTGGCCGGCCACGCCTTCCAAGTaGCAGCCCCGGACCAAGGCTGGAGTACGCGGCCGCCACTCGAGC +
Preference number: 5 (lower is better)
Translates to: TLRMCASLWPATPSK*QPRTKAGVRGRHSS
Trigger: GCTCGAGTGGCGGCCGCGTACTCCAGCCTTGGTCCGGGGCTGCCACTTGGAAGGCGTGGCCGGCCACAAGGAGGCGCACATCCTGAGGGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CAA 90 bp GCCGGGGCAGCCACCGCCACCACGGGCTCCCGCTTGCTGGGGGAACCTGGGAGCATGGACTTCCTGGTCTaGAGACCCGGTCTTGGGACG +
Preference number: 5 (lower is better)
Translates to: AGAATATTGSRLLGEPGSMDFLV*RPGLGT
Trigger: CGTCCCAAGACCGGGTCTCAAGACCAGGAAGTCCAT...GCTCCCAGGTTCCCCCAGCAAGCGGGAGCCCGTGGTGGCGGTGGCTGCCCCGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344849.4
CDS GCA 90 bp TGGCCAGCAGCAGGGCAACAGCCAGAGGGAGCGTGCCGCGGTCCATaGTGTCCACGTGGGGGCCTGTGCGCTGGGCCTTATCCTGTGTCC +
Preference number: 5 (lower is better)
Translates to: WPAAGQQPEGACRGP*CPRGGLCAGPYPVS
Trigger: GGACACAGGATAAGGCCCAGCGCACAGGCCCCCACGTGGACAGCATGGACCGCGGCACGCTCCCTCTGGCTGTTGCCCTGCTGCTGGCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344849.4
ENST00000373203.9
CDS-3UTR CAA 90 bp GAGTGGAGGACTGGCTCCCAGGGTGAGTTCACACCAGTGCTCCCAGCTGGCGGCACCACGGGCTCCCGCTaGCTGGGGGAACGCGTGTGC +
Preference number: 5 (lower is better)
Translates to: EWRTGSQGEFTPVLPAGGTTGSR*LGERVC
Trigger: GCACACGCGTTCCCCCAGCAAGCGGGAGCCCGTGGT...GCCGCCAGCTGGGAGCACTGGTGTGAACTCACCCTGGGAGCCAGTCCTCCACTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373203.9
ENST00000480266.5
CDS CCA 90 bp GTAGAAGTGGAGGAGGAAGCTGAAGCGCGGGTCACCCTCGGGGCTTaGGGACAGCAGGCTCACACAGTTGCCCTTGGCCGCCCGGCCCTG +
Preference number: 5 (lower is better)
Translates to: VEVEEEAEARVTLGA*GQQAHTVALGRPAL
Trigger: CAGGGCCGGGCGGCCAAGGGCAACTGTGTGAGCCTGCTGTCCCCAAGCCCCGAGGGTGACCCGCGCTTCAGCTTCCTCCTCCACTTCTAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CAA 90 bp AGGGAGGCGGGAAGGGTAGGCGCGGAGAGCAGGCTCCATTCTGGGTCGAGTGGAGGGGCTGGGCTGGAGTaGCTGTCCGAAGGATGGGCG +
Preference number: 5 (lower is better)
Translates to: REAGRVGAESRLHSGSSGGAGLE*LSEGWA
Trigger: CGCCCATCCTTCGGACAGCAACTCCAGCCCAGCCCC...TCCACTCGACCCAGAATGGAGCCTGCTCTCCGCGCCTACCCTTCCCGCCTCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344849.4
ENST00000373203.9
CDS-3UTR CAA 90 bp GAGTGGAGGACTGGCTCCCAGGGTGAGTTCACACCAGTGCTCCCAGCTGGCGGCGGGGCTGGGCTGGAGTaGCTGTCCGAAGGATGGGCG +
Preference number: 5 (lower is better)
Translates to: EWRTGSQGEFTPVLPAGGGAGLE*LSEGWA
Trigger: CGCCCATCCTTCGGACAGCAACTCCAGCCCAGCCCC...GCCGCCAGCTGGGAGCACTGGTGTGAACTCACCCTGGGAGCCAGTCCTCCACTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344849.4
ENST00000373203.9
CDS-3UTR CAA 90 bp GTGGTTGGTGCTGCTGCTCTCCGAGGAGGCCGGGGCAGCCACCGCCACCACGGGGGGCTACAAGTGTCCTaGGGAGGAGTGGTCTGGATC +
Preference number: 5 (lower is better)
Translates to: VVGAAALRGGRGSHRHHGGLQVS*GGVVWI
Trigger: GATCCAGACCACTCCTCCCAAGGACACTTGTAGCCC...CCCGTGGTGGCGGTGGCTGCCCCGGCCTCCTCGGAGAGCAGCAGCACCAACCAC
68% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000344849.4
CDS-3UTR CAA 90 bp GAGGCCGGGGCAGCCACCGCCACCACGGGCTCCCGCTTGCTGGGGGAACCTGGGGAGAGGCTGTCCATGTaGAGGCAGTGCACCTTTTTC +
Preference number: 5 (lower is better)
Translates to: EAGAATATTGSRLLGEPGERLSM*RQCTFF
Trigger: GAAAAAGGTGCACTGCCTCAACATGGACAGCCTCTC...CCCAGGTTCCCCCAGCAAGCGGGAGCCCGTGGTGGCGGTGGCTGCCCCGGCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000344849.4
CDS-3UTR CAA 90 bp GGAAGGGTAGGCGCGGAGAGCAGGCTCCATTCTGGGTCGAGTGGAGGACTGGCTAGCAGGCTCACACAGTaGCCCTTGGCCGCCCGGCCC +
Preference number: 5 (lower is better)
Translates to: GRVGAESRLHSGSSGGLASRLTQ*PLAARP
Trigger: GGGCCGGGCGGCCAAGGGCAACTGTGTGAGCCTGCT...AGCCAGTCCTCCACTCGACCCAGAATGGAGCCTGCTCTCCGCGCCTACCCTTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CAA 90 bp ACTGTTCTTGCCACCCTCTGGGCTCCCAGGCTGGGCTCCGCTAGGCTCCTGTCTAGCAGGCTCACACAGTaGCCCTTGGCCGCCCGGCCC +
Preference number: 5 (lower is better)
Translates to: TVLATLWAPRLGSARLLSSRLTQ*PLAARP
Trigger: GGGCCGGGCGGCCAAGGGCAACTGTGTGAGCCTGCT...AGACAGGAGCCTAGCGGAGCCCAGCCTGGGAGCCCAGAGGGTGGCAAGAACAGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CAA 90 bp GGAAGGGTAGGCGCGGAGAGCAGGCTCCATTCTGGGTCGAGTGGAGGACTGGCTCTCACACAGTTGCCCTaGGCCGCCCGGCCCTGGATG +
Preference number: 5 (lower is better)
Translates to: GRVGAESRLHSGSSGGLALTQLP*AARPWM
Trigger: CATCCAGGGCCGGGCGGCCAAGGGCAACTGTGTGAG...AGCCAGTCCTCCACTCGACCCAGAATGGAGCCTGCTCTCCGCGCCTACCCTTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CAA 90 bp GGAGAGCAGGCTCCATTCTGGGTCGAGTGGAGGACTGGCTCCCAGGGTGAGTTCAGCAGGCTCACACAGTaGCCCTTGGCCGCCCGGCCC +
Preference number: 5 (lower is better)
Translates to: GEQAPFWVEWRTGSQGEFSRLTQ*PLAARP
Trigger: GGGCCGGGCGGCCAAGGGCAACTGTGTGAGCCTGCT...GAACTCACCCTGGGAGCCAGTCCTCCACTCGACCCAGAATGGAGCCTGCTCTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CAA 90 bp GGAGAGCAGGCTCCATTCTGGGTCGAGTGGAGGACTGGCTCCCAGGGTGAGTTCAGCGGGGAGGTGCTGTaGGCCTGGCTGGGCTGGCCT +
Preference number: 5 (lower is better)
Translates to: GEQAPFWVEWRTGSQGEFSGEVL*AWLGWP
Trigger: AGGCCAGCCCAGCCAGGCCAACAGCACCTCCCCGCT...GAACTCACCCTGGGAGCCAGTCCTCCACTCGACCCAGAATGGAGCCTGCTCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CAA 90 bp TCCATGTGGCAGGAGCTAGGCTCCCAACGCCCACTGTTCTTGCCACCCTCTGGGACCACGGGCTCCCGCTaGCTGGGGGAACGCGTGTGC +
Preference number: 5 (lower is better)
Translates to: SMWQELGSQRPLFLPPSGTTGSR*LGERVC
Trigger: GCACACGCGTTCCCCCAGCAAGCGGGAGCCCGTGGT...CCCAGAGGGTGGCAAGAACAGTGGGCGTTGGGAGCCTAGCTCCTGCCACATGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CAA 90 bp GGTAGGCGCGGAGAGCAGGCTCCATTCTGGGTCGAGTGGAGGACTGGCTCCCAGGCTGTGACGGGCCCGTaGGGAACTCCAGGAAGAGGA +
Preference number: 5 (lower is better)
Translates to: GRRGEQAPFWVEWRTGSQAVTGP*GTPGRG
Trigger: TCCTCTTCCTGGAGTTCCCAACGGGCCCGTCACAGC...CTGGGAGCCAGTCCTCCACTCGACCCAGAATGGAGCCTGCTCTCCGCGCCTACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CAA 90 bp TCCATGTGGCAGGAGCTAGGCTCCCAACGCCCACTGTTCTTGCCACCCTCTGGGAGGATGTGCGCCTCCTaGTGGCCGGCCACGCCTTCC +
Preference number: 5 (lower is better)
Translates to: SMWQELGSQRPLFLPPSGRMCAS*WPATPS
Trigger: GGAAGGCGTGGCCGGCCACAAGGAGGCGCACATCCT...CCCAGAGGGTGGCAAGAACAGTGGGCGTTGGGAGCCTAGCTCCTGCCACATGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CAA 90 bp AGTTCAGGTGTGGAGGCCGCAGGGATAGATCCAGGTGGCTCTGGGCTGGGCCCTGCCACAATGCTGGCATaGAGCATCCGGGCCTCCCCC +
Preference number: 5 (lower is better)
Translates to: SSGVEAAGIDPGGSGLGPATMLA*SIRASP
Trigger: GGGGGAGGCCCGGATGCTCAATGCCAGCATTGTGGC...AGGGCCCAGCCCAGAGCCACCTGGATCTATCCCTGCGGCCTCCACACCTGAACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CAA 90 bp GGGCTCCATGTGGCAGGAGCTAGGCTCCCAACGCCCACTGTTCTTGCCACCCTCGCCACAATGCTGGCATaGAGCATCCGGGCCTCCCCC +
Preference number: 5 (lower is better)
Translates to: GLHVAGARLPTPTVLATLATMLA*SIRASP
Trigger: GGGGGAGGCCCGGATGCTCAATGCCAGCATTGTGGC...GAGGGTGGCAAGAACAGTGGGCGTTGGGAGCCTAGCTCCTGCCACATGGAGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CAA 90 bp GGAGAGCAGGCTCCATTCTGGGTCGAGTGGAGGACTGGCTCCCAGGGTGAGTTCCTCACACAGTTGCCCTaGGCCGCCCGGCCCTGGATG +
Preference number: 5 (lower is better)
Translates to: GEQAPFWVEWRTGSQGEFLTQLP*AARPWM
Trigger: CATCCAGGGCCGGGCGGCCAAGGGCAACTGTGTGAG...GAACTCACCCTGGGAGCCAGTCCTCCACTCGACCCAGAATGGAGCCTGCTCTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CAA 90 bp AGGGAGGCGGGAAGGGTAGGCGCGGAGAGCAGGCTCCATTCTGGGTCGAGTGGACTCCCGATGCTGTGGTaGGTGCTGCTGCTCTCCGAG +
Preference number: 5 (lower is better)
Translates to: REAGRVGAESRLHSGSSGLPMLW*VLLLSE
Trigger: CTCGGAGAGCAGCAGCACCAACCACAGCATCGGGAG...TCCACTCGACCCAGAATGGAGCCTGCTCTCCGCGCCTACCCTTCCCGCCTCCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CAA 90 bp AGGGAGGCGGGAAGGGTAGGCGCGGAGAGCAGGCTCCATTCTGGGTCGAGTGGACAACGCCCACTGTTCTaGCCACCCTCTGGGCTCCCA +
Preference number: 5 (lower is better)
Translates to: REAGRVGAESRLHSGSSGQRPLF*PPSGLP
Trigger: TGGGAGCCCAGAGGGTGGCAAGAACAGTGGGCGTTG...TCCACTCGACCCAGAATGGAGCCTGCTCTCCGCGCCTACCCTTCCCGCCTCCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CAA 90 bp GGTAGGCGCGGAGAGCAGGCTCCATTCTGGGTCGAGTGGAGGACTGGCTCCCAGCCCAGGACAAGCAGCTaGGCTACTCCCCCTCTGCTG +
Preference number: 5 (lower is better)
Translates to: GRRGEQAPFWVEWRTGSQPRTSS*ATPPLL
Trigger: CAGCAGAGGGGGAGTAGCCAAGCTGCTTGTCCTGGG...CTGGGAGCCAGTCCTCCACTCGACCCAGAATGGAGCCTGCTCTCCGCGCCTACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS TCA 90 bp TGGGCCCTGGGCCCATCACAGGATCCTGACATGCCAGCGTCACCCTaGCACCCAGCATGTGATGGGTGCTCCCCGCGTAGGCCAAGTGCA +
Preference number: 5 (lower is better)
Translates to: WALGPSQDPDMPASP*HPACDGCSPRRPSA
Trigger: TGCACTTGGCCTACGCGGGGAGCACCCATCACATGCTGGGTGTCAGGGTGACGCTGGCATGTCAGGATCCTGTGATGGGCCCAGGGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462196.1
CDS-3UTR CAA 90 bp ACTGTTCTTGCCACCCTCTGGGCTCCCAGGCTGGGCTCCGCTAGGCTCCTGTCTGCTGTGACGGGCCCGTaGGGAACTCCAGGAAGAGGA +
Preference number: 5 (lower is better)
Translates to: TVLATLWAPRLGSARLLSAVTGP*GTPGRG
Trigger: TCCTCTTCCTGGAGTTCCCAACGGGCCCGTCACAGC...AGACAGGAGCCTAGCGGAGCCCAGCCTGGGAGCCCAGAGGGTGGCAAGAACAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CAA 90 bp CTGTTCTTGCCACCCTCTGGGCTCCCAGGCTGGGCTCCGCTAGGCTCCTGTCTCGGCAGGACGAGGCCTTaGCTTGTGCAACCAGACAGG +
Preference number: 5 (lower is better)
Translates to: LFLPPSGLPGWAPLGSCLGRTRP*LVQPDR
Trigger: CCTGTCTGGTTGCACAAGCAAAGGCCTCGTCCTGCC...GAGACAGGAGCCTAGCGGAGCCCAGCCTGGGAGCCCAGAGGGTGGCAAGAACAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CAA 90 bp AGTTCAGGTGTGGAGGCCGCAGGGATAGATCCAGGTGGCTCTGGGCTGGGCCCTCAACGCCCACTGTTCTaGCCACCCTCTGGGCTCCCA +
Preference number: 5 (lower is better)
Translates to: SSGVEAAGIDPGGSGLGPQRPLF*PPSGLP
Trigger: TGGGAGCCCAGAGGGTGGCAAGAACAGTGGGCGTTG...AGGGCCCAGCCCAGAGCCACCTGGATCTATCCCTGCGGCCTCCACACCTGAACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CAA 90 bp ACTGTTCTTGCCACCCTCTGGGCTCCCAGGCTGGGCTCCGCTAGGCTCCTGTCTCCCAGGACAAGCAGCTaGGCTACTCCCCCTCTGCTG +
Preference number: 5 (lower is better)
Translates to: TVLATLWAPRLGSARLLSPRTSS*ATPPLL
Trigger: CAGCAGAGGGGGAGTAGCCAAGCTGCTTGTCCTGGG...AGACAGGAGCCTAGCGGAGCCCAGCCTGGGAGCCCAGAGGGTGGCAAGAACAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CAA 90 bp GGAAGGGTAGGCGCGGAGAGCAGGCTCCATTCTGGGTCGAGTGGAGGACTGGCTCCCAGGACAAGCAGCTaGGCTACTCCCCCTCTGCTG +
Preference number: 5 (lower is better)
Translates to: GRVGAESRLHSGSSGGLAPRTSS*ATPPLL
Trigger: CAGCAGAGGGGGAGTAGCCAAGCTGCTTGTCCTGGG...AGCCAGTCCTCCACTCGACCCAGAATGGAGCCTGCTCTCCGCGCCTACCCTTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS TCA 90 bp TGCTGGCCAGCGGTAGCTCCACGAAGGATGCCACAATGCTGGCATTaGGCATCCGGGCCTCCCCCAGGAGGCCTTGAGGTGTGTCTGGGA +
Preference number: 5 (lower is better)
Translates to: CWPAVAPRRMPQCWH*ASGPPPGGLEVCLG
Trigger: TCCCAGACACACCTCAAGGCCTCCTGGGGGAGGCCCGGATGCTCAATGCCAGCATTGTGGCATCCTTCGTGGAGCTACCGCTGGCCAGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS CCA 90 bp GACATGAGCAGCTCCGGGCTACAAGTGTCCTTGGGAGGAGTGGTCTaGATCGGTGCGGGTGAGGTCTGCAGCCTACCACCGCAGCTGGAG +
Preference number: 5 (lower is better)
Translates to: DMSSSGLQVSLGGVV*IGAGEVCSLPPQLE
Trigger: CTCCAGCTGCGGTGGTAGGCTGCAGACCTCACCCGCACCGATCCAGACCACTCCTCCCAAGGACACTTGTAGCCCGGAGCTGCTCATGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS CCA 90 bp CCCTGGATGAGTTCCACGGTGCCTCCCTCAGGCCCCAAGTCCAGGTaGCAGCTGTCTAACTGGAGCAGGAACTCGGAGACGGATGGGGAC +
Preference number: 5 (lower is better)
Translates to: PWMSSTVPPSGPKSR*QLSNWSRNSETDGD
Trigger: GTCCCCATCCGTCTCCGAGTTCCTGCTCCAGTTAGACAGCTGCCACCTGGACTTGGGGCCTGAGGGAGGCACCGTGGAACTCATCCAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CAA 90 bp GGAGAGCAGGCTCCATTCTGGGTCGAGTGGAGGACTGGCTCCCAGGGTGAGTTCGCTGTGACGGGCCCGTaGGGAACTCCAGGAAGAGGA +
Preference number: 5 (lower is better)
Translates to: GEQAPFWVEWRTGSQGEFAVTGP*GTPGRG
Trigger: TCCTCTTCCTGGAGTTCCCAACGGGCCCGTCACAGC...GAACTCACCCTGGGAGCCAGTCCTCCACTCGACCCAGAATGGAGCCTGCTCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CAA 90 bp CTGTTCTTGCCACCCTCTGGGCTCCCAGGCTGGGCTCCGCTAGGCTCCTGTCTCGGGCCAGGTGCCATTTaGCTTGGATGCCTGGAGAGT +
Preference number: 5 (lower is better)
Translates to: LFLPPSGLPGWAPLGSCLGPGAI*LGCLES
Trigger: ACTCTCCAGGCATCCAAGCAAAATGGCACCTGGCCC...GAGACAGGAGCCTAGCGGAGCCCAGCCTGGGAGCCCAGAGGGTGGCAAGAACAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CAA 90 bp CCAGGGCCCCTCAATCCCTCAGAGGCTTCACTGGGCTCCCCCGGGTGGATGGAGATCTGCATGTTGTGGTaGGCGTCGATGAGCCAGGAC +
Preference number: 5 (lower is better)
Translates to: PGPLNPSEASLGSPGWMEICMLW*ASMSQD
Trigger: GTCCTGGCTCATCGACGCCAACCACAACATGCAGAT...CTCCATCCACCCGGGGGAGCCCAGTGAAGCCTCTGAGGGATTGAGGGGCCCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344849.4
CDS-3UTR CAA 90 bp GCCGGGGCAGCCACCGCCACCACGGGCTCCCGCTTGCTGGGGGAACCTGGGAGCTTCTCTGGAAAGATCTaGAAGGAGTATTCTCCAGTG +
Preference number: 5 (lower is better)
Translates to: AGAATATTGSRLLGEPGSFSGKI*KEYSPV
Trigger: CACTGGAGAATACTCCTTCAAGATCTTTCCAGAGAA...GCTCCCAGGTTCCCCCAGCAAGCGGGAGCCCGTGGTGGCGGTGGCTGCCCCGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344849.4
CDS-3UTR CAA 90 bp GGCAGAGGGGGCTCCATGTGGCAGGAGCTAGGCTCCCAACGCCCACTGTTCTTGGGCAGGACGAGGCCTTaGCTTGTGCAACCAGACAGG +
Preference number: 5 (lower is better)
Translates to: GRGGSMWQELGSQRPLFLGRTRP*LVQPDR
Trigger: CCTGTCTGGTTGCACAAGCAAAGGCCTCGTCCTGCC...CAAGAACAGTGGGCGTTGGGAGCCTAGCTCCTGCCACATGGAGCCCCCTCTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CAA 90 bp GGAAGGGTAGGCGCGGAGAGCAGGCTCCATTCTGGGTCGAGTGGAGGACTGGCTCCCAGACCCACTGGGTaGAAGGTTCTGTGGGGTGGA +
Preference number: 5 (lower is better)
Translates to: GRVGAESRLHSGSSGGLAPRPTG*KVLWGG
Trigger: TCCACCCCACAGAACCTTCAACCCAGTGGGTCTGGG...AGCCAGTCCTCCACTCGACCCAGAATGGAGCCTGCTCTCCGCGCCTACCCTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS CCA 90 bp ACCAGAAGCACCTCTCGGGGCCAGGTGCCATTTTGCTTGGATGCCTaGAGAGTCAGCTCCAGCTGTGACGGGCCCGTTGGGAACTCCAGG +
Preference number: 5 (lower is better)
Translates to: TRSTSRGQVPFCLDA*RVSSSCDGPVGNSR
Trigger: CCTGGAGTTCCCAACGGGCCCGTCACAGCTGGAGCTGACTCTCCAGGCATCCAAGCAAAATGGCACCTGGCCCCGAGAGGTGCTTCTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CAA 90 bp GAGTGGAGGACTGGCTCCCAGGGTGAGTTCACACCAGTGCTCCCAGCTGGCGGCGTCCAGATCTGCATGTaGTGGTTGGCGTCGATGAGC +
Preference number: 5 (lower is better)
Translates to: EWRTGSQGEFTPVLPAGGVQICM*WLASMS
Trigger: GCTCATCGACGCCAACCACAACATGCAGATCTGGAC...GCCGCCAGCTGGGAGCACTGGTGTGAACTCACCCTGGGAGCCAGTCCTCCACTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CAA 90 bp CCATTCTGGGTCGAGTGGAGGACTGGCTCCCAGGGTGAGTTCACACCAGTGCTCCTCCCCCAGGAGGCCTaGAGGTGTGTCTGGGAGCTT +
Preference number: 5 (lower is better)
Translates to: PFWVEWRTGSQGEFTPVLLPQEA*RCVWEL
Trigger: AAGCTCCCAGACACACCTCAAGGCCTCCTGGGGGAG...GAGCACTGGTGTGAACTCACCCTGGGAGCCAGTCCTCCACTCGACCCAGAATGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CAA 90 bp GGCAGAGGGGGCTCCATGTGGCAGGAGCTAGGCTCCCAACGCCCACTGTTCTTGCTGCGCAAGACAAACTaGTCACCCCTGTCCTCTGCC +
Preference number: 5 (lower is better)
Translates to: GRGGSMWQELGSQRPLFLLRKTN*SPLSSA
Trigger: GGCAGAGGACAGGGGTGACAAGTTTGTCTTGCGCAG...CAAGAACAGTGGGCGTTGGGAGCCTAGCTCCTGCCACATGGAGCCCCCTCTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CAA 90 bp GGCAGAGGGGGCTCCATGTGGCAGGAGCTAGGCTCCCAACGCCCACTGTTCTTGGGACGAGGCCTTTGCTaGTGCAACCAGACAGGTCAG +
Preference number: 5 (lower is better)
Translates to: GRGGSMWQELGSQRPLFLGRGLC*CNQTGQ
Trigger: CTGACCTGTCTGGTTGCACAAGCAAAGGCCTCGTCC...CAAGAACAGTGGGCGTTGGGAGCCTAGCTCCTGCCACATGGAGCCCCCTCTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS GCA 90 bp GGTCATACAGAAGGGGAGACCGAGGCATTCCAGACACACATGGCTTaGCAGGAGTTTCCCGAGGCCTGCTCCCTCCCAGGCCAGGAAGAG +
Preference number: 5 (lower is better)
Translates to: GHTEGETEAFQTHMA*QEFPEACSLPGQEE
Trigger: CTCTTCCTGGCCTGGGAGGGAGCAGGCCTCGGGAAACTCCTGGCAAGCCATGTGTGTCTGGAATGCCTCGGTCTCCCCTTCTGTATGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486329.1
CDS-3UTR CAA 90 bp ACTGTTCTTGCCACCCTCTGGGCTCCCAGGCTGGGCTCCGCTAGGCTCCTGTCTATCTGCATGTTGTGGTaGGCGTCGATGAGCCAGGAC +
Preference number: 5 (lower is better)
Translates to: TVLATLWAPRLGSARLLSICMLW*ASMSQD
Trigger: GTCCTGGCTCATCGACGCCAACCACAACATGCAGAT...AGACAGGAGCCTAGCGGAGCCCAGCCTGGGAGCCCAGAGGGTGGCAAGAACAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CAA 90 bp GGCAGAGGGGGCTCCATGTGGCAGGAGCTAGGCTCCCAACGCCCACTGTTCTTGATCTGCATGTTGTGGTaGGCGTCGATGAGCCAGGAC +
Preference number: 5 (lower is better)
Translates to: GRGGSMWQELGSQRPLFLICMLW*ASMSQD
Trigger: GTCCTGGCTCATCGACGCCAACCACAACATGCAGAT...CAAGAACAGTGGGCGTTGGGAGCCTAGCTCCTGCCACATGGAGCCCCCTCTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CAA 90 bp GAGGTGCTGTTGGCCTGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCGCCACAATGCTGGCATaGAGCATCCGGGCCTCCCCC +
Preference number: 5 (lower is better)
Translates to: EVLLAWLGWPESVSSSPFATMLA*SIRASP
Trigger: GGGGGAGGCCCGGATGCTCAATGCCAGCATTGTGGC...GAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCAGGCCAACAGCACCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CAA 90 bp GAGTGGAGGACTGGCTCCCAGGGTGAGTTCACACCAGTGCTCCCAGCTGGCGGCGAGAGGCTGTCCATGTaGAGGCAGTGCACCTTTTTC +
Preference number: 5 (lower is better)
Translates to: EWRTGSQGEFTPVLPAGGERLSM*RQCTFF
Trigger: GAAAAAGGTGCACTGCCTCAACATGGACAGCCTCTC...GCCGCCAGCTGGGAGCACTGGTGTGAACTCACCCTGGGAGCCAGTCCTCCACTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CAA 90 bp CTGCCCAGCTCAGTTCACCAGTGCTGGATCCAGGTTCAAATGACAGGGACTTGGCTCACACAGTTGCCCTaGGCCGCCCGGCCCTGGATG +
Preference number: 5 (lower is better)
Translates to: LPSSVHQCWIQVQMTGTWLTQLP*AARPWM
Trigger: CATCCAGGGCCGGGCGGCCAAGGGCAACTGTGTGAG...CCAAGTCCCTGTCATTTGAACCTGGATCCAGCACTGGTGAACTGAGCTGGGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS TCA 90 bp CCTGGTCTTGAGACCCGGTCTTGGGACGCAGGGCTACCGTGCAGCTaGGGGTGCCGGTTTTGGGTATGGGTACTGTGTAGAAGTGGAGGA +
Preference number: 5 (lower is better)
Translates to: PGLETRSWDAGLPCS*GCRFWVWVLCRSGG
Trigger: TCCTCCACTTCTACACAGTACCCATACCCAAAACCGGCACCCTCAGCTGCACGGTAGCCCTGCGTCCCAAGACCGGGTCTCAAGACCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CAA 90 bp GAGGTGCTGTTGGCCTGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCCTCCCCCAGGAGGCCTaGAGGTGTGTCTGGGAGCTT +
Preference number: 5 (lower is better)
Translates to: EVLLAWLGWPESVSSSPFLPQEA*RCVWEL
Trigger: AAGCTCCCAGACACACCTCAAGGCCTCCTGGGGGAG...GAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCAGGCCAACAGCACCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CAA 90 bp CTGTTCTTGCCACCCTCTGGGCTCCCAGGCTGGGCTCCGCTAGGCTCCTGTCTCTTGACCACCGCCTCATaGCTGATCATACTTGCTGAC +
Preference number: 5 (lower is better)
Translates to: LFLPPSGLPGWAPLGSCLLTTAS*LIILAD
Trigger: GTCAGCAAGTATGATCAGCAATGAGGCGGTGGTCAA...GAGACAGGAGCCTAGCGGAGCCCAGCCTGGGAGCCCAGAGGGTGGCAAGAACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CAA 90 bp TCCATGTGGCAGGAGCTAGGCTCCCAACGCCCACTGTTCTTGCCACCCTCTGGGGAGCTCGACAGGATATaGACCACCGCCTCATTGCTG +
Preference number: 5 (lower is better)
Translates to: SMWQELGSQRPLFLPPSGELDRI*TTASLL
Trigger: CAGCAATGAGGCGGTGGTCAATATCCTGTCGAGCTC...CCCAGAGGGTGGCAAGAACAGTGGGCGTTGGGAGCCTAGCTCCTGCCACATGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CAA 90 bp CAGGCTCCATTCTGGGTCGAGTGGAGGACTGGCTCCCAGGGTGAGTTCACACCAATGGACTTCCTGGTCTaGAGACCCGGTCTTGGGACG +
Preference number: 5 (lower is better)
Translates to: QAPFWVEWRTGSQGEFTPMDFLV*RPGLGT
Trigger: CGTCCCAAGACCGGGTCTCAAGACCAGGAAGTCCAT...TGGTGTGAACTCACCCTGGGAGCCAGTCCTCCACTCGACCCAGAATGGAGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CAA 90 bp CCAGGCTGGGCTCCGCTAGGCTCCTGTCTCCCCTGCCAGTTAGTTAGGCAAGTTGGACGAGGCCTTTGCTaGTGCAACCAGACAGGTCAG +
Preference number: 5 (lower is better)
Translates to: PGWAPLGSCLPCQLVRQVGRGLC*CNQTGQ
Trigger: CTGACCTGTCTGGTTGCACAAGCAAAGGCCTCGTCC...AACTTGCCTAACTAACTGGCAGGGGAGACAGGAGCCTAGCGGAGCCCAGCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CAA 90 bp TGGCCTGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCCTGCCCAGCTGGCAGGACGAGGCCTTaGCTTGTGCAACCAGACAGG +
Preference number: 5 (lower is better)
Translates to: WPGWAGLNLFQVLPSCPAGRTRP*LVQPDR
Trigger: CCTGTCTGGTTGCACAAGCAAAGGCCTCGTCCTGCC...AGCTGGGCAGGAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCAGGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CAA 90 bp GAGGTGCTGTTGGCCTGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCCTCCCGATGCTGTGGTaGGTGCTGCTGCTCTCCGAG +
Preference number: 5 (lower is better)
Translates to: EVLLAWLGWPESVSSSPFLPMLW*VLLLSE
Trigger: CTCGGAGAGCAGCAGCACCAACCACAGCATCGGGAG...GAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCAGGCCAACAGCACCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CAA 90 bp GAGGTGCTGTTGGCCTGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCCAACGCCCACTGTTCTaGCCACCCTCTGGGCTCCCA +
Preference number: 5 (lower is better)
Translates to: EVLLAWLGWPESVSSSPFQRPLF*PPSGLP
Trigger: TGGGAGCCCAGAGGGTGGCAAGAACAGTGGGCGTTG...GAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCAGGCCAACAGCACCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS TCA 90 bp CCAGGGTCATGGCGTCGTCGGCACACTTTGTCTGGATCAAGGACATaGGCAGCTCCGGGCTACAAGTGTCCTTGGGAGGAGTGGTCTGGA +
Preference number: 5 (lower is better)
Translates to: PGSWRRRHTLSGSRT*AAPGYKCPWEEWSG
Trigger: TCCAGACCACTCCTCCCAAGGACACTTGTAGCCCGGAGCTGCTCATGTCCTTGATCCAGACAAAGTGTGCCGACGACGCCATGACCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS GCA 90 bp TTTACACTGAGGACCAGAAGCACCTCTCGGGGCCAGGTGCCATTTTaGTTGGATGCCTGGAGAGTCAGCTCCAGCTGTGACGGGCCCGTT +
Preference number: 5 (lower is better)
Translates to: FTLRTRSTSRGQVPF*LDAWRVSSSCDGPV
Trigger: AACGGGCCCGTCACAGCTGGAGCTGACTCTCCAGGCATCCAAGCAAAATGGCACCTGGCCCCGAGAGGTGCTTCTGGTCCTCAGTGTAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS GCA 90 bp AGGTCTGCAGCCTACCACCGCAGCTGGAGGCATGAAGTGAGACAATaGTGGCCAGCGGTAGCTCCACGAAGGATGCCACAATGCTGGCAT +
Preference number: 5 (lower is better)
Translates to: RSAAYHRSWRHEVRQ*WPAVAPRRMPQCWH
Trigger: ATGCCAGCATTGTGGCATCCTTCGTGGAGCTACCGCTGGCCAGCATTGTCTCACTTCATGCCTCCAGCTGCGGTGGTAGGCTGCAGACCT
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CAA 90 bp ACTGTTCTTGCCACCCTCTGGGCTCCCAGGCTGGGCTCCGCTAGGCTCCTGTCTGGTGTGTCTGGGAGCTaGAAGCCACGAATGTTTTTC +
Preference number: 5 (lower is better)
Translates to: TVLATLWAPRLGSARLLSGVSGS*KPRMFF
Trigger: GAAAAACATTCGTGGCTTCAAGCTCCCAGACACACC...AGACAGGAGCCTAGCGGAGCCCAGCCTGGGAGCCCAGAGGGTGGCAAGAACAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CAA 90 bp AGTTCAGGTGTGGAGGCCGCAGGGATAGATCCAGGTGGCTCTGGGCTGGGCCCTGGTGTGTCTGGGAGCTaGAAGCCACGAATGTTTTTC +
Preference number: 5 (lower is better)
Translates to: SSGVEAAGIDPGGSGLGPGVSGS*KPRMFF
Trigger: GAAAAACATTCGTGGCTTCAAGCTCCCAGACACACC...AGGGCCCAGCCCAGAGCCACCTGGATCTATCCCTGCGGCCTCCACACCTGAACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CAA 90 bp CAGGCTCCATTCTGGGTCGAGTGGAGGACTGGCTCCCAGGGTGAGTTCACACCAGAGCTCGACAGGATATaGACCACCGCCTCATTGCTG +
Preference number: 5 (lower is better)
Translates to: QAPFWVEWRTGSQGEFTPELDRI*TTASLL
Trigger: CAGCAATGAGGCGGTGGTCAATATCCTGTCGAGCTC...TGGTGTGAACTCACCCTGGGAGCCAGTCCTCCACTCGACCCAGAATGGAGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CAA 90 bp CCATTCTGGGTCGAGTGGAGGACTGGCTCCCAGGGTGAGTTCACACCAGTGCTCGAGCTCGACAGGATATaGACCACCGCCTCATTGCTG +
Preference number: 5 (lower is better)
Translates to: PFWVEWRTGSQGEFTPVLELDRI*TTASLL
Trigger: CAGCAATGAGGCGGTGGTCAATATCCTGTCGAGCTC...GAGCACTGGTGTGAACTCACCCTGGGAGCCAGTCCTCCACTCGACCCAGAATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CAA 90 bp GTGCTGTTGGCCTGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCCTGCCCAGACCCACTGGGTaGAAGGTTCTGTGGGGTGGA +
Preference number: 5 (lower is better)
Translates to: VLLAWLGWPESVSSSPFLPRPTG*KVLWGG
Trigger: TCCACCCCACAGAACCTTCAACCCAGTGGGTCTGGG...CAGGAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCAGGCCAACAGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CAA 90 bp GTGCTGGATCCAGGTTCAAATGACAGGGACTTGGGTTTTTACAACAGCGTGGCAAGCGGGGAGGTGCTGTaGGCCTGGCTGGGCTGGCCT +
Preference number: 5 (lower is better)
Translates to: VLDPGSNDRDLGFYNSVASGEVL*AWLGWP
Trigger: AGGCCAGCCCAGCCAGGCCAACAGCACCTCCCCGCT...TGCCACGCTGTTGTAAAAACCCAAGTCCCTGTCATTTGAACCTGGATCCAGCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS TCA 90 bp GGATTCCCAGGGCCTGGAGATGCAGGAAGACACTGCTGTTTACACTaGGGACCAGAAGCACCTCTCGGGGCCAGGTGCCATTTTGCTTGG +
Preference number: 5 (lower is better)
Translates to: GFPGPGDAGRHCCLH*GPEAPLGARCHFAW
Trigger: CCAAGCAAAATGGCACCTGGCCCCGAGAGGTGCTTCTGGTCCTCAGTGTAAACAGCAGTGTCTTCCTGCATCTCCAGGCCCTGGGAATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000462196.1
ENST00000480266.5
CDS GCA 90 bp AAGCCCTCTGACTTGAGAGACCAAGAGCGTCACCCTCAGCAGTCCTaGTCCGGTCATACAGAAGGGGAGACCGAGGCATTCCAGACACAC +
Preference number: 5 (lower is better)
Translates to: KPSDLRDQERHPQQS*SGHTEGETEAFQTH
Trigger: GTGTGTCTGGAATGCCTCGGTCTCCCCTTCTGTATGACCGGAGCAGGACTGCTGAGGGTGACGCTCTTGGTCTCTCAAGTCAGAGGGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486329.1
CDS-3UTR CAA 90 bp AGGTGCTGTTGGCCTGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCCGGGCCAGGTGCCATTTaGCTTGGATGCCTGGAGAGT +
Preference number: 5 (lower is better)
Translates to: RCCWPGWAGLNLFQVLPSGPGAI*LGCLES
Trigger: ACTCTCCAGGCATCCAAGCAAAATGGCACCTGGCCC...GGAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCAGGCCAACAGCACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CAA 90 bp GAGGTGCTGTTGGCCTGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCCTGCGCAAGACAAACTaGTCACCCCTGTCCTCTGCC +
Preference number: 5 (lower is better)
Translates to: EVLLAWLGWPESVSSSPFLRKTN*SPLSSA
Trigger: GGCAGAGGACAGGGGTGACAAGTTTGTCTTGCGCAG...GAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCAGGCCAACAGCACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CAA 90 bp GTGCTGTTGGCCTGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCCTGGGACGAGGCCTTTGCTaGTGCAACCAGACAGGTCAG +
Preference number: 5 (lower is better)
Translates to: VLLAWLGWPESVSSSPFLGRGLC*CNQTGQ
Trigger: CTGACCTGTCTGGTTGCACAAGCAAAGGCCTCGTCC...CAGGAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCAGGCCAACAGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CAA 90 bp AGGGAGGCGGGAAGGGTAGGCGCGGAGAGCAGGCTCCATTCTGGGTCGAGTGGATCATGGTCTGATTTATaGGTGGTGAATACACAGGGG +
Preference number: 5 (lower is better)
Translates to: REAGRVGAESRLHSGSSGSWSDL*VVNTQG
Trigger: CCCCTGTGTATTCACCACCAATAAATCAGACCATGA...TCCACTCGACCCAGAATGGAGCCTGCTCTCCGCGCCTACCCTTCCCGCCTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CAA 90 bp GGTAGGCGCGGAGAGCAGGCTCCATTCTGGGTCGAGTGGAGGACTGGCTCCCAGTCATGGTCTGATTTATaGGTGGTGAATACACAGGGG +
Preference number: 5 (lower is better)
Translates to: GRRGEQAPFWVEWRTGSQSWSDL*VVNTQG
Trigger: CCCCTGTGTATTCACCACCAATAAATCAGACCATGA...CTGGGAGCCAGTCCTCCACTCGACCCAGAATGGAGCCTGCTCTCCGCGCCTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS TCA 90 bp AACTCCAGGAAGAGGACATGGACTTCAAGGATGGCATTGGGGGCCTaGGCCACGCAGCCCTTCGAGACCTGGCTAGTGGTATATGTCACC +
Preference number: 5 (lower is better)
Translates to: NSRKRTWTSRMALGA*ATQPFETWLVVYVT
Trigger: GGTGACATATACCACTAGCCAGGTCTCGAAGGGCTGCGTGGCTCAGGCCCCCAATGCCATCCTTGAAGTCCATGTCCTCTTCCTGGAGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS TCA 90 bp ACTTGCCCAAGGCCACACAGCCAGTATGTGCTAAGCCCTCTGACTTaGGAGACCAAGAGCGTCACCCTCAGCAGTCCTGCTCCGGTCATA +
Preference number: 5 (lower is better)
Translates to: TCPRPHSQYVLSPLT*ETKSVTLSSPAPVI
Trigger: TATGACCGGAGCAGGACTGCTGAGGGTGACGCTCTTGGTCTCTCAAGTCAGAGGGCTTAGCACATACTGGCTGTGTGGCCTTGGGCAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486329.1
CDS-3UTR CAA 90 bp GAGGTGCTGTTGGCCTGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCCAGGTGCCATTTTGCTaGGATGCCTGGAGAGTCAGC +
Preference number: 5 (lower is better)
Translates to: EVLLAWLGWPESVSSSPFQVPFC*DAWRVS
Trigger: GCTGACTCTCCAGGCATCCAAGCAAAATGGCACCTG...GAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCAGGCCAACAGCACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CAA 90 bp GTGCTGTTGGCCTGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCCTGCAGGTGCCATTTTGCTaGGATGCCTGGAGAGTCAGC +
Preference number: 5 (lower is better)
Translates to: VLLAWLGWPESVSSSPFLQVPFC*DAWRVS
Trigger: GCTGACTCTCCAGGCATCCAAGCAAAATGGCACCTG...CAGGAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCAGGCCAACAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CAA 90 bp CTGCCCAGCTCAGTTCACCAGTGCTGGATCCAGGTTCAAATGACAGGGACTTGGGGGCCAGGTGCCATTTaGCTTGGATGCCTGGAGAGT +
Preference number: 5 (lower is better)
Translates to: LPSSVHQCWIQVQMTGTWGPGAI*LGCLES
Trigger: ACTCTCCAGGCATCCAAGCAAAATGGCACCTGGCCC...CCAAGTCCCTGTCATTTGAACCTGGATCCAGCACTGGTGAACTGAGCTGGGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CAA 90 bp TGGATCCAGGTTCAAATGACAGGGACTTGGGTTTTTACAACAGCGTGGCAAGTGAGGATGTGCGCCTCCTaGTGGCCGGCCACGCCTTCC +
Preference number: 5 (lower is better)
Translates to: WIQVQMTGTWVFTTAWQVRMCAS*WPATPS
Trigger: GGAAGGCGTGGCCGGCCACAAGGAGGCGCACATCCT...CACTTGCCACGCTGTTGTAAAAACCCAAGTCCCTGTCATTTGAACCTGGATCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CAA 90 bp CCAGGCTGGGCTCCGCTAGGCTCCTGTCTCCCCTGCCAGTTAGTTAGGCAAGTTTTGACCACCGCCTCATaGCTGATCATACTTGCTGAC +
Preference number: 5 (lower is better)
Translates to: PGWAPLGSCLPCQLVRQVLTTAS*LIILAD
Trigger: GTCAGCAAGTATGATCAGCAATGAGGCGGTGGTCAA...AACTTGCCTAACTAACTGGCAGGGGAGACAGGAGCCTAGCGGAGCCCAGCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CAA 90 bp TGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCCTGCCCAGCTCAGTTATGGACTTCCTGGTCTaGAGACCCGGTCTTGGGACG +
Preference number: 5 (lower is better)
Translates to: WLGWPESVSSSPFLPSSVMDFLV*RPGLGT
Trigger: CGTCCCAAGACCGGGTCTCAAGACCAGGAAGTCCAT...AACTGAGCTGGGCAGGAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CAA 90 bp TCCATGTGGCAGGAGCTAGGCTCCCAACGCCCACTGTTCTTGCCACCCTCTGGGAAAATGCTGGTCACCTaGAGCAGAAGCCTAACCTCT +
Preference number: 5 (lower is better)
Translates to: SMWQELGSQRPLFLPPSGKMLVT*SRSLTS
Trigger: AGAGGTTAGGCTTCTGCTCAAGGTGACCAGCATTTT...CCCAGAGGGTGGCAAGAACAGTGGGCGTTGGGAGCCTAGCTCCTGCCACATGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480266.5
CDS-3UTR CAA 90 bp CTGCCCAGCTCAGTTCACCAGTGCTGGATCCAGGTTCAAATGACAGGGACTTGGCAGGTGCCATTTTGCTaGGATGCCTGGAGAGTCAGC +
Preference number: 5 (lower is better)
Translates to: LPSSVHQCWIQVQMTGTWQVPFC*DAWRVS
Trigger: GCTGACTCTCCAGGCATCCAAGCAAAATGGCACCTG...CCAAGTCCCTGTCATTTGAACCTGGATCCAGCACTGGTGAACTGAGCTGGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CAA 90 bp CTGCCCAGCTCAGTTCACCAGTGCTGGATCCAGGTTCAAATGACAGGGACTTGGGTCCAGATCTGCATGTaGTGGTTGGCGTCGATGAGC +
Preference number: 5 (lower is better)
Translates to: LPSSVHQCWIQVQMTGTWVQICM*WLASMS
Trigger: GCTCATCGACGCCAACCACAACATGCAGATCTGGAC...CCAAGTCCCTGTCATTTGAACCTGGATCCAGCACTGGTGAACTGAGCTGGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CAA 90 bp CCCAGCTCAGTTCACCAGTGCTGGATCCAGGTTCAAATGACAGGGACTTGGGTTGGGCTACAAGTGTCCTaGGGAGGAGTGGTCTGGATC +
Preference number: 5 (lower is better)
Translates to: PSSVHQCWIQVQMTGTWVGLQVS*GGVVWI
Trigger: GATCCAGACCACTCCTCCCAAGGACACTTGTAGCCC...AACCCAAGTCCCTGTCATTTGAACCTGGATCCAGCACTGGTGAACTGAGCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CAA 90 bp AGGTGCTGTTGGCCTGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCCGAGAGGCTGTCCATGTaGAGGCAGTGCACCTTTTTC +
Preference number: 5 (lower is better)
Translates to: RCCWPGWAGLNLFQVLPSERLSM*RQCTFF
Trigger: GAAAAAGGTGCACTGCCTCAACATGGACAGCCTCTC...GGAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCAGGCCAACAGCACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CAA 90 bp TCCATGTGGCAGGAGCTAGGCTCCCAACGCCCACTGTTCTTGCCACCCTCTGGGTCAAATGACAGGGACTaGGGTTTTTACAACAGCGTG +
Preference number: 5 (lower is better)
Translates to: SMWQELGSQRPLFLPPSGSNDRD*GFYNSV
Trigger: CACGCTGTTGTAAAAACCCAAGTCCCTGTCATTTGA...CCCAGAGGGTGGCAAGAACAGTGGGCGTTGGGAGCCTAGCTCCTGCCACATGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS CCA 90 bp GGCATTGAGCATCCGGGCCTCCCCCAGGAGGCCTTGAGGTGTGTCTaGGAGCTTGAAGCCACGAATGTTTTTCTCTGGAAAGATCTTGAA +
Preference number: 5 (lower is better)
Translates to: GIEHPGLPQEALRCV*ELEATNVFLWKDLE
Trigger: TTCAAGATCTTTCCAGAGAAAAACATTCGTGGCTTCAAGCTCCCAGACACACCTCAAGGCCTCCTGGGGGAGGCCCGGATGCTCAATGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CAA 90 bp CCCAGCTCAGTTCACCAGTGCTGGATCCAGGTTCAAATGACAGGGACTTGGGTTGTCCAGATCTGCATGTaGTGGTTGGCGTCGATGAGC +
Preference number: 5 (lower is better)
Translates to: PSSVHQCWIQVQMTGTWVVQICM*WLASMS
Trigger: GCTCATCGACGCCAACCACAACATGCAGATCTGGAC...AACCCAAGTCCCTGTCATTTGAACCTGGATCCAGCACTGGTGAACTGAGCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CAA 90 bp AGGTGCTGTTGGCCTGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCCGGTGTGTCTGGGAGCTaGAAGCCACGAATGTTTTTC +
Preference number: 5 (lower is better)
Translates to: RCCWPGWAGLNLFQVLPSGVSGS*KPRMFF
Trigger: GAAAAACATTCGTGGCTTCAAGCTCCCAGACACACC...GGAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCAGGCCAACAGCACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CAA 90 bp AGCTCAGTTCACCAGTGCTGGATCCAGGTTCAAATGACAGGGACTTGGGTTTTTCTCCCGATGCTGTGGTaGGTGCTGCTGCTCTCCGAG +
Preference number: 5 (lower is better)
Translates to: SSVHQCWIQVQMTGTWVFLPMLW*VLLLSE
Trigger: CTCGGAGAGCAGCAGCACCAACCACAGCATCGGGAG...AAAAACCCAAGTCCCTGTCATTTGAACCTGGATCCAGCACTGGTGAACTGAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CAA 90 bp GTGCTGGATCCAGGTTCAAATGACAGGGACTTGGGTTTTTACAACAGCGTGGCACCCAGACCCACTGGGTaGAAGGTTCTGTGGGGTGGA +
Preference number: 5 (lower is better)
Translates to: VLDPGSNDRDLGFYNSVAPRPTG*KVLWGG
Trigger: TCCACCCCACAGAACCTTCAACCCAGTGGGTCTGGG...TGCCACGCTGTTGTAAAAACCCAAGTCCCTGTCATTTGAACCTGGATCCAGCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS CCA 90 bp TCTTTCTTTAGTACCAGGGTCATGGCGTCGTCGGCACACTTTGTCTaGATCAAGGACATGAGCAGCTCCGGGCTACAAGTGTCCTTGGGA +
Preference number: 5 (lower is better)
Translates to: SFFSTRVMASSAHFV*IKDMSSSGLQVSLG
Trigger: TCCCAAGGACACTTGTAGCCCGGAGCTGCTCATGTCCTTGATCCAGACAAAGTGTGCCGACGACGCCATGACCCTGGTACTAAAGAAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
ENST00000486329.1
CDS-3UTR CAA 90 bp GTGCTGGATCCAGGTTCAAATGACAGGGACTTGGGTTTTTACAACAGCGTGGCAGGGCTACAAGTGTCCTaGGGAGGAGTGGTCTGGATC +
Preference number: 5 (lower is better)
Translates to: VLDPGSNDRDLGFYNSVAGLQVS*GGVVWI
Trigger: GATCCAGACCACTCCTCCCAAGGACACTTGTAGCCC...TGCCACGCTGTTGTAAAAACCCAAGTCCCTGTCATTTGAACCTGGATCCAGCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CAA 90 bp CTGCCCAGCTCAGTTCACCAGTGCTGGATCCAGGTTCAAATGACAGGGACTTGGTTGACCACCGCCTCATaGCTGATCATACTTGCTGAC +
Preference number: 5 (lower is better)
Translates to: LPSSVHQCWIQVQMTGTWLTTAS*LIILAD
Trigger: GTCAGCAAGTATGATCAGCAATGAGGCGGTGGTCAA...CCAAGTCCCTGTCATTTGAACCTGGATCCAGCACTGGTGAACTGAGCTGGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CAA 90 bp TGGCCTGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCCTGCCCAGCTTTCTCTGGAAAGATCTaGAAGGAGTATTCTCCAGTG +
Preference number: 5 (lower is better)
Translates to: WPGWAGLNLFQVLPSCPAFSGKI*KEYSPV
Trigger: CACTGGAGAATACTCCTTCAAGATCTTTCCAGAGAA...AGCTGGGCAGGAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCAGGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CAA 90 bp GAGGTGCTGTTGGCCTGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCTCAAATGACAGGGACTaGGGTTTTTACAACAGCGTG +
Preference number: 5 (lower is better)
Translates to: EVLLAWLGWPESVSSSPFSNDRD*GFYNSV
Trigger: CACGCTGTTGTAAAAACCCAAGTCCCTGTCATTTGA...GAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCAGGCCAACAGCACCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CAA 90 bp GAGGTGCTGTTGGCCTGGCTGGGCTGGCCTGAATCTGTTTCAAGTTCTCCCTTCTCATGGTCTGATTTATaGGTGGTGAATACACAGGGG +
Preference number: 5 (lower is better)
Translates to: EVLLAWLGWPESVSSSPFSWSDL*VVNTQG
Trigger: CCCCTGTGTATTCACCACCAATAAATCAGACCATGA...GAAGGGAGAACTTGAAACAGATTCAGGCCAGCCCAGCCAGGCCAACAGCACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS GCA 90 bp GAGCCTCAGTTTCCCCATTTGCAGACCACCAATAATCACTGCAGATaGTCCCATCATGCTTACTGGGAGCCTAGGCAGCTTTACACGAGT +
Preference number: 5 (lower is better)
Translates to: EPQFPHLQTTNNHCR*SHHAYWEPRQLYTS
Trigger: ACTCGTGTAAAGCTGCCTAGGCTCCCAGTAAGCATGATGGGAGCATCTGCAGTGATTATTGGTGGTCTGCAAATGGGGAAACTGAGGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480266.5
CDS-3UTR CAA 90 bp CCCAGCTCAGTTCACCAGTGCTGGATCCAGGTTCAAATGACAGGGACTTGGGTTCCTCAGTTTCCCCATTaGCAGACCACCAATAATCAC +
Preference number: 5 (lower is better)
Translates to: PSSVHQCWIQVQMTGTWVPQFPH*QTTNNH
Trigger: GTGATTATTGGTGGTCTGCAAATGGGGAAACTGAGG...AACCCAAGTCCCTGTCATTTGAACCTGGATCCAGCACTGGTGAACTGAGCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480266.5
CDS-3UTR CAA 90 bp CCCAGCTCAGTTCACCAGTGCTGGATCCAGGTTCAAATGACAGGGACTTGGGTTTCAAATGACAGGGACTaGGGTTTTTACAACAGCGTG +
Preference number: 5 (lower is better)
Translates to: PSSVHQCWIQVQMTGTWVSNDRD*GFYNSV
Trigger: CACGCTGTTGTAAAAACCCAAGTCCCTGTCATTTGA...AACCCAAGTCCCTGTCATTTGAACCTGGATCCAGCACTGGTGAACTGAGCTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS CCA 90 bp GCCTTGAGGTGTGTCTGGGAGCTTGAAGCCACGAATGTTTTTCTCTaGAAAGATCTTGAAGGAGTATTCTCCAGTGGTCCAGATCTGCAT +
Preference number: 5 (lower is better)
Translates to: ALRCVWELEATNVFL*KDLEGVFSSGPDLH
Trigger: ATGCAGATCTGGACCACTGGAGAATACTCCTTCAAGATCTTTCCAGAGAAAAACATTCGTGGCTTCAAGCTCCCAGACACACCTCAAGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CAA 90 bp GTGCTGGATCCAGGTTCAAATGACAGGGACTTGGGTTTTTACAACAGCGTGGCATTCTCTGGAAAGATCTaGAAGGAGTATTCTCCAGTG +
Preference number: 5 (lower is better)
Translates to: VLDPGSNDRDLGFYNSVAFSGKI*KEYSPV
Trigger: CACTGGAGAATACTCCTTCAAGATCTTTCCAGAGAA...TGCCACGCTGTTGTAAAAACCCAAGTCCCTGTCATTTGAACCTGGATCCAGCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS-3UTR CAA 90 bp TGGATCCAGGTTCAAATGACAGGGACTTGGGTTTTTACAACAGCGTGGCAAGTGTGTTTCTGCAAGACCTaGGAGGATGATCAAGAAAAA +
Preference number: 5 (lower is better)
Translates to: WIQVQMTGTWVFTTAWQVCFCKT*EDDQEK
Trigger: TTTTTCTTGATCATCCTCCAAGGTCTTGCAGAAACA...CACTTGCCACGCTGTTGTAAAAACCCAAGTCCCTGTCATTTGAACCTGGATCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480266.5
CDS GCA 72 bp GGCCCGGCCGAGTGGCCCGGCAGGACCCTCAGGATGTaGGCCTCCTTGTGGCCGGCCACGCCTTCCAAGTGG +
Preference number: 6 (lower is better)
Translates to: GPAEWPGRTLRM*ASLWPATPSKW
Trigger: CCACTTGGAAGGCGTGGCCGGCCACAAGGAGGCGCACATCCTGAGGGTCCTGCCGGGCCACTCGGCCGGGCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS CAA 90 bp GGCCCGGCCGAGTGGCCCGGCAGGACCCTCAGGATGTGCGCCTCCTaGTGGCCGGCCACGCCTTCCAAGTGGCAGCCCCGGACCAAGGCT +
Preference number: 6 (lower is better)
Translates to: GPAEWPGRTLRMCAS*WPATPSKWQPRTKA
Trigger: AGCCTTGGTCCGGGGCTGCCACTTGGAAGGCGTGGCCGGCCACAAGGAGGCGCACATCCTGAGGGTCCTGCCGGGCCACTCGGCCGGGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS CCA 72 bp GGCCACGCCTTCCAAGTGGCAGCCCCGGACCAAGGCTaGAGTACGCGGCCGCCACTCGAGCGTGCGGCCCAT +
Preference number: 6 (lower is better)
Translates to: GHAFQVAAPDQG*STRPPLERAAH
Trigger: ATGGGCCGCACGCTCGAGTGGCGGCCGCGTACTCCAGCCTTGGTCCGGGGCTGCCACTTGGAAGGCGTGGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS CCA 72 bp TGGCCCGGCAGGACCCTCAGGATGTGCGCCTCCTTGTaGCCGGCCACGCCTTCCAAGTGGCAGCCCCGGACC +
Preference number: 6 (lower is better)
Translates to: WPGRTLRMCASL*PATPSKWQPRT
Trigger: GGTCCGGGGCTGCCACTTGGAAGGCGTGGCCGGCCACAAGGAGGCGCACATCCTGAGGGTCCTGCCGGGCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS CAA 72 bp GAGTGGCCCGGCAGGACCCTCAGGATGTGCGCCTCCTaGTGGCCGGCCACGCCTTCCAAGTGGCAGCCCCGG +
Preference number: 6 (lower is better)
Translates to: EWPGRTLRMCAS*WPATPSKWQPR
Trigger: CCGGGGCTGCCACTTGGAAGGCGTGGCCGGCCACAAGGAGGCGCACATCCTGAGGGTCCTGCCGGGCCACTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS CCA 72 bp ATGTGCGCCTCCTTGTGGCCGGCCACGCCTTCCAAGTaGCAGCCCCGGACCAAGGCTGGAGTACGCGGCCGC +
Preference number: 6 (lower is better)
Translates to: MCASLWPATPSK*QPRTKAGVRGR
Trigger: GCGGCCGCGTACTCCAGCCTTGGTCCGGGGCTGCCACTTGGAAGGCGTGGCCGGCCACAAGGAGGCGCACAT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS CAA 90 bp GGGTCACCCTCGGGGCTTGGGGACAGCAGGCTCACACAGTTGCCCTaGGCCGCCCGGCCCTGGATGAGTTCCACGGTGCCTCCCTCAGGC +
Preference number: 6 (lower is better)
Translates to: GSPSGLGDSRLTQLP*AARPWMSSTVPPSG
Trigger: GCCTGAGGGAGGCACCGTGGAACTCATCCAGGGCCGGGCGGCCAAGGGCAACTGTGTGAGCCTGCTGTCCCCAAGCCCCGAGGGTGACCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS CAA 90 bp AAGCGCGGGTCACCCTCGGGGCTTGGGGACAGCAGGCTCACACAGTaGCCCTTGGCCGCCCGGCCCTGGATGAGTTCCACGGTGCCTCCC +
Preference number: 6 (lower is better)
Translates to: KRGSPSGLGDSRLTQ*PLAARPWMSSTVPP
Trigger: GGGAGGCACCGTGGAACTCATCCAGGGCCGGGCGGCCAAGGGCAACTGTGTGAGCCTGCTGTCCCCAAGCCCCGAGGGTGACCCGCGCTT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS GCA 72 bp GCGTGCCGCGGTCCATGCTGTCCACGTGGGGGCCTGTaGGCTGGGCCTTATCCTGTGTCCAGTGGCAGGGCT +
Preference number: 6 (lower is better)
Translates to: ACRGPCCPRGGL*AGPYPVSSGRA
Trigger: AGCCCTGCCACTGGACACAGGATAAGGCCCAGCGCACAGGCCCCCACGTGGACAGCATGGACCGCGGCACGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344849.4
ENST00000373203.9
CDS GCA 72 bp GCAGGGCAACAGCCAGAGGGAGCGTGCCGCGGTCCATaGTGTCCACGTGGGGGCCTGTGCGCTGGGCCTTAT +
Preference number: 6 (lower is better)
Translates to: AGQQPEGACRGP*CPRGGLCAGPY
Trigger: ATAAGGCCCAGCGCACAGGCCCCCACGTGGACAGCATGGACCGCGGCACGCTCCCTCTGGCTGTTGCCCTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344849.4
ENST00000373203.9
CDS CCA 72 bp GCGGCCGCCACTCGAGCGTGCGGCCCATGTCCTGGCTaGCTTCCAGCATGCAGAAGGACAGTGACCCCTGGG +
Preference number: 6 (lower is better)
Translates to: AAATRACGPCPG*LPACRRTVTPG
Trigger: CCCAGGGGTCACTGTCCTTCTGCATGCTGGAAGCCAGCCAGGACATGGGCCGCACGCTCGAGTGGCGGCCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000462196.1
ENST00000480266.5
CDS CCA 72 bp AGCAGGCTCACACAGTTGCCCTTGGCCGCCCGGCCCTaGATGAGTTCCACGGTGCCTCCCTCAGGCCCCAAG +
Preference number: 6 (lower is better)
Translates to: SRLTQLPLAARP*MSSTVPPSGPK
Trigger: CTTGGGGCCTGAGGGAGGCACCGTGGAACTCATCCAGGGCCGGGCGGCCAAGGGCAACTGTGTGAGCCTGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS CCA 72 bp GAGGAGGAAGCTGAAGCGCGGGTCACCCTCGGGGCTTaGGGACAGCAGGCTCACACAGTTGCCCTTGGCCGC +
Preference number: 6 (lower is better)
Translates to: EEEAEARVTLGA*GQQAHTVALGR
Trigger: GCGGCCAAGGGCAACTGTGTGAGCCTGCTGTCCCCAAGCCCCGAGGGTGACCCGCGCTTCAGCTTCCTCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS CAA 72 bp TCGGGGCTTGGGGACAGCAGGCTCACACAGTTGCCCTaGGCCGCCCGGCCCTGGATGAGTTCCACGGTGCCT +
Preference number: 6 (lower is better)
Translates to: SGLGDSRLTQLP*AARPWMSSTVP
Trigger: AGGCACCGTGGAACTCATCCAGGGCCGGGCGGCCAAGGGCAACTGTGTGAGCCTGCTGTCCCCAAGCCCCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS CAA 72 bp TCACCCTCGGGGCTTGGGGACAGCAGGCTCACACAGTaGCCCTTGGCCGCCCGGCCCTGGATGAGTTCCACG +
Preference number: 6 (lower is better)
Translates to: SPSGLGDSRLTQ*PLAARPWMSST
Trigger: CGTGGAACTCATCCAGGGCCGGGCGGCCAAGGGCAACTGTGTGAGCCTGCTGTCCCCAAGCCCCGAGGGTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS TCA 72 bp CCCAGCAGCAGCCCCTGGGCCAGGTGGGTTAGCACGTaGCTGTCCATCTCACCCGCTGTGGTGATGAGCTCG +
Preference number: 6 (lower is better)
Translates to: PSSSPWARWVST*LSISPAVVMSS
Trigger: CGAGCTCATCACCACAGCGGGTGAGATGGACAGTCACGTGCTAACCCACCTGGCCCAGGGGCTGCTGCTGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486329.1
CDS GCA 72 bp ACCCTGCAGGATGAGGACGGCATCGAGATCCCCGGGTaGGCAGCTCAGTTCCACCTTCACCGTCACCGTCCG +
Preference number: 6 (lower is better)
Translates to: TLQDEDGIEIPG*AAQFHLHRHRP
Trigger: CGGACGGTGACGGTGAAGGTGGAACTGAGCTGCGCACCCGGGGATCTCGATGCCGTCCTCATCCTGCAGGGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS TCA 72 bp AGTGTCCTTGGGAGGAGTGGTCTGGATCGGTGCGGGTaGGGTCTGCAGCCTACCACCGCAGCTGGAGGCATG +
Preference number: 6 (lower is better)
Translates to: SVLGRSGLDRCG*GLQPTTAAGGM
Trigger: CATGCCTCCAGCTGCGGTGGTAGGCTGCAGACCTCACCCGCACCGATCCAGACCACTCCTCCCAAGGACACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS TCA 72 bp GGCCCATCACAGGATCCTGACATGCCAGCGTCACCCTaGCACCCAGCATGTGATGGGTGCTCCCCGCGTAGG +
Preference number: 6 (lower is better)
Translates to: GPSQDPDMPASP*HPACDGCSPRR
Trigger: CCTACGCGGGGAGCACCCATCACATGCTGGGTGTCAGGGTGACGCTGGCATGTCAGGATCCTGTGATGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462196.1
CDS CCA 72 bp GAGTTGCTGTCCGAAGGATGGGCGGGGAGGGGGTGCTaGGCTCCAATGGATGGCAGTGACAGCAGCAGTCCT +
Preference number: 6 (lower is better)
Translates to: ELLSEGWAGRGC*APMDGSDSSSP
Trigger: AGGACTGCTGCTGTCACTGCCATCCATTGGAGCCCAGCACCCCCTCCCCGCCCATCCTTCGGACAGCAACTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344849.4
ENST00000373203.9
CDS CCA 72 bp ACCTCTCGGGGCCAGGTGCCATTTTGCTTGGATGCCTaGAGAGTCAGCTCCAGCTGTGACGGGCCCGTTGGG +
Preference number: 6 (lower is better)
Translates to: TSRGQVPFCLDA*RVSSSCDGPVG
Trigger: CCCAACGGGCCCGTCACAGCTGGAGCTGACTCTCCAGGCATCCAAGCAAAATGGCACCTGGCCCCGAGAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS CCA 72 bp AGCTCCGGGCTACAAGTGTCCTTGGGAGGAGTGGTCTaGATCGGTGCGGGTGAGGTCTGCAGCCTACCACCG +
Preference number: 6 (lower is better)
Translates to: SSGLQVSLGGVV*IGAGEVCSLPP
Trigger: CGGTGGTAGGCTGCAGACCTCACCCGCACCGATCCAGACCACTCCTCCCAAGGACACTTGTAGCCCGGAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS CCA 72 bp TGGATGGAGGGGCCCGGCATGCTCACTGTGGGGGCCTaGGGTACTCACGCGTGTGCGAGTAGATGTACCAGA +
Preference number: 6 (lower is better)
Translates to: WMEGPGMLTVGA*GTHACASRCTR
Trigger: TCTGGTACATCTACTCGCACACGCGTGAGTACCCCAGGCCCCCACAGTGAGCATGCCGGGCCCCTCCATCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344849.4
CDS CAA 90 bp ACACTGAGGACCAGAAGCACCTCTCGGGGCCAGGTGCCATTTTGCTaGGATGCCTGGAGAGTCAGCTCCAGCTGTGACGGGCCCGTTGGG +
Preference number: 6 (lower is better)
Translates to: TLRTRSTSRGQVPFC*DAWRVSSSCDGPVG
Trigger: CCCAACGGGCCCGTCACAGCTGGAGCTGACTCTCCAGGCATCCAAGCAAAATGGCACCTGGCCCCGAGAGGTGCTTCTGGTCCTCAGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS CCA 72 bp AGTTCCACGGTGCCTCCCTCAGGCCCCAAGTCCAGGTaGCAGCTGTCTAACTGGAGCAGGAACTCGGAGACG +
Preference number: 6 (lower is better)
Translates to: SSTVPPSGPKSR*QLSNWSRNSET
Trigger: CGTCTCCGAGTTCCTGCTCCAGTTAGACAGCTGCCACCTGGACTTGGGGCCTGAGGGAGGCACCGTGGAACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS TCA 72 bp GAGACCCGGTCTTGGGACGCAGGGCTACCGTGCAGCTaGGGGTGCCGGTTTTGGGTATGGGTACTGTGTAGA +
Preference number: 6 (lower is better)
Translates to: ETRSWDAGLPCS*GCRFWVWVLCR
Trigger: TCTACACAGTACCCATACCCAAAACCGGCACCCTCAGCTGCACGGTAGCCCTGCGTCCCAAGACCGGGTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS CCA 72 bp ACTCCAGGAAGAGGACATGGACTTCAAGGATGGCATTaGGGGCCTGAGCCACGCAGCCCTTCGAGACCTGGC +
Preference number: 6 (lower is better)
Translates to: TPGRGHGLQGWH*GPEPRSPSRPG
Trigger: GCCAGGTCTCGAAGGGCTGCGTGGCTCAGGCCCCCAATGCCATCCTTGAAGTCCATGTCCTCTTCCTGGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS CCA 72 bp CATGTGATGGGTGCTCCCCGCGTAGGCCAAGTGCAGTaGGATTCCCAGGGCCTGGAGATGCAGGAAGACACT +
Preference number: 6 (lower is better)
Translates to: HVMGAPRVGQVQ*DSQGLEMQEDT
Trigger: AGTGTCTTCCTGCATCTCCAGGCCCTGGGAATCCCACTGCACTTGGCCTACGCGGGGAGCACCCATCACATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462196.1
CDS CAA 72 bp ACCAGAAGCACCTCTCGGGGCCAGGTGCCATTTTGCTaGGATGCCTGGAGAGTCAGCTCCAGCTGTGACGGG +
Preference number: 6 (lower is better)
Translates to: TRSTSRGQVPFC*DAWRVSSSCDG
Trigger: CCCGTCACAGCTGGAGCTGACTCTCCAGGCATCCAAGCAAAATGGCACCTGGCCCCGAGAGGTGCTTCTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS CAA 72 bp GCCAGGCTGTGTGAAGAGCTTCCACACAGCACCTCATaGGCTGCCCAGAAGCACCCTGTGGCGCAGAGTCCT +
Preference number: 6 (lower is better)
Translates to: ARLCEELPHSTS*AAQKHPVAQSP
Trigger: AGGACTCTGCGCCACAGGGTGCTTCTGGGCAGCCAATGAGGTGCTGTGTGGAAGCTCTTCACACAGCCTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486329.1
CDS GCA 72 bp GCCTACCACCGCAGCTGGAGGCATGAAGTGAGACAATaGTGGCCAGCGGTAGCTCCACGAAGGATGCCACAA +
Preference number: 6 (lower is better)
Translates to: AYHRSWRHEVRQ*WPAVAPRRMPQ
Trigger: TTGTGGCATCCTTCGTGGAGCTACCGCTGGCCAGCATTGTCTCACTTCATGCCTCCAGCTGCGGTGGTAGGC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS CCA 72 bp CCAGGCTGTGTGAAGAGCTTCCACACAGCACCTCATTaGCTGCCCAGAAGCACCCTGTGGCGCAGAGTCCTT +
Preference number: 6 (lower is better)
Translates to: PGCVKSFHTAPH*LPRSTLWRRVL
Trigger: AAGGACTCTGCGCCACAGGGTGCTTCTGGGCAGCCAATGAGGTGCTGTGTGGAAGCTCTTCACACAGCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486329.1
CDS CAA 72 bp ATCAAGGACATGAGCAGCTCCGGGCTACAAGTGTCCTaGGGAGGAGTGGTCTGGATCGGTGCGGGTGAGGTC +
Preference number: 6 (lower is better)
Translates to: IKDMSSSGLQVS*GGVVWIGAGEV
Trigger: GACCTCACCCGCACCGATCCAGACCACTCCTCCCAAGGACACTTGTAGCCCGGAGCTGCTCATGTCCTTGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS CAA 90 bp TTTGTCTGGATCAAGGACATGAGCAGCTCCGGGCTACAAGTGTCCTaGGGAGGAGTGGTCTGGATCGGTGCGGGTGAGGTCTGCAGCCTA +
Preference number: 6 (lower is better)
Translates to: FVWIKDMSSSGLQVS*GGVVWIGAGEVCSL
Trigger: TAGGCTGCAGACCTCACCCGCACCGATCCAGACCACTCCTCCCAAGGACACTTGTAGCCCGGAGCTGCTCATGTCCTTGATCCAGACAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS TCA 72 bp AAGAGGACATGGACTTCAAGGATGGCATTGGGGGCCTaGGCCACGCAGCCCTTCGAGACCTGGCTAGTGGTA +
Preference number: 6 (lower is better)
Translates to: KRTWTSRMALGA*ATQPFETWLVV
Trigger: TACCACTAGCCAGGTCTCGAAGGGCTGCGTGGCTCAGGCCCCCAATGCCATCCTTGAAGTCCATGTCCTCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS TCA 72 bp TGGCGTCGTCGGCACACTTTGTCTGGATCAAGGACATaGGCAGCTCCGGGCTACAAGTGTCCTTGGGAGGAG +
Preference number: 6 (lower is better)
Translates to: WRRRHTLSGSRT*AAPGYKCPWEE
Trigger: CTCCTCCCAAGGACACTTGTAGCCCGGAGCTGCTCATGTCCTTGATCCAGACAAAGTGTGCCGACGACGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS GCA 72 bp GACTTGAGAGACCAAGAGCGTCACCCTCAGCAGTCCTaGTCCGGTCATACAGAAGGGGAGACCGAGGCATTC +
Preference number: 6 (lower is better)
Translates to: DLRDQERHPQQS*SGHTEGETEAF
Trigger: GAATGCCTCGGTCTCCCCTTCTGTATGACCGGAGCAGGACTGCTGAGGGTGACGCTCTTGGTCTCTCAAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486329.1
CDS CCA 72 bp TTGGGAACTCCAGGAAGAGGACATGGACTTCAAGGATaGCATTGGGGGCCTGAGCCACGCAGCCCTTCGAGA +
Preference number: 6 (lower is better)
Translates to: LGTPGRGHGLQG*HWGPEPRSPSR
Trigger: TCTCGAAGGGCTGCGTGGCTCAGGCCCCCAATGCCATCCTTGAAGTCCATGTCCTCTTCCTGGAGTTCCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS TCA 72 bp CTGCCTCACAGCTGGGGTCCCAGAAGGTCAGGCCCGTaGTGGTGCACTTCAAATGCGCAACAAGCTCTTTCT +
Preference number: 6 (lower is better)
Translates to: LPHSWGPRRSGP*WCTSNAQQALS
Trigger: AGAAAGAGCTTGTTGCGCATTTGAAGTGCACCATCACGGGCCTGACCTTCTGGGACCCCAGCTGTGAGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
ENST00000486329.1
CDS TCA 72 bp GGTAGAGGCCCAGCTGGAAAGAGAGGCTGTCCATGTTaGGGCAGTGCACCTTTTTCCGCTGTGGTGATGAGC +
Preference number: 6 (lower is better)
Translates to: GRGPAGKRGCPC*GSAPFSAVVMS
Trigger: GCTCATCACCACAGCGGAAAAAGGTGCACTGCCTCAACATGGACAGCCTCTCTTTCCAGCTGGGCCTCTACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS TCA 72 bp AGGCCACACAGCCAGTATGTGCTAAGCCCTCTGACTTaGGAGACCAAGAGCGTCACCCTCAGCAGTCCTGCT +
Preference number: 6 (lower is better)
Translates to: RPHSQYVLSPLT*ETKSVTLSSPA
Trigger: AGCAGGACTGCTGAGGGTGACGCTCTTGGTCTCTCAAGTCAGAGGGCTTAGCACATACTGGCTGTGTGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486329.1
CDS CCA 72 bp GAAGGTGACCAGGCTGGAATTGTAGGCCAAGTGCAGTaGGATTCCCAGGGCCTGGAGATGCAGGAAGACACT +
Preference number: 6 (lower is better)
Translates to: EGDQAGIVGQVQ*DSQGLEMQEDT
Trigger: AGTGTCTTCCTGCATCTCCAGGCCCTGGGAATCCCACTGCACTTGGCCTACAATTCCAGCCTGGTCACCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS CCA 72 bp AGTACCAGGGTCATGGCGTCGTCGGCACACTTTGTCTaGATCAAGGACATGAGCAGCTCCGGGCTACAAGTG +
Preference number: 6 (lower is better)
Translates to: STRVMASSAHFV*IKDMSSSGLQV
Trigger: CACTTGTAGCCCGGAGCTGCTCATGTCCTTGATCCAGACAAAGTGTGCCGACGACGCCATGACCCTGGTACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
ENST00000486329.1
CDS TCA 72 bp AATATTTATCAAGGAGGCACCAGCTGCCAGGCTGTGTaGAGAGCTTCCACACAGCACCTCATTGGCTGCCCA +
Preference number: 6 (lower is better)
Translates to: NIYQGGTSCQAV*RASTQHLIGCP
Trigger: TGGGCAGCCAATGAGGTGCTGTGTGGAAGCTCTTCACACAGCCTGGCAGCTGGTGCCTCCTTGATAAATATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486329.1
CDS GCA 72 bp CCTCAGTTTCCCCATTTGCAGACCACCAATAATCACTaGAGATGCTCCCATCATGCTTACTGGGAGCCTAGG +
Preference number: 6 (lower is better)
Translates to: PQFPHLQTTNNH*RCSHHAYWEPR
Trigger: CCTAGGCTCCCAGTAAGCATGATGGGAGCATCTGCAGTGATTATTGGTGGTCTGCAAATGGGGAAACTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480266.5
CDS GCA 72 bp GGGGCCCACAGGCTGAAGGTCACAATGGACTGTTTCTaGAAGACCTTGGAGGATGATCAAGAAAAACAGCTC +
Preference number: 6 (lower is better)
Translates to: GAHRLKVTMDCF*KTLEDDQEKQL
Trigger: GAGCTGTTTTTCTTGATCATCCTCCAAGGTCTTGCAGAAACAGTCCATTGTGACCTTCAGCCTGTGGGCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480266.5
CDS GCA 72 bp TTTCCCCATTTGCAGACCACCAATAATCACTGCAGATaGTCCCATCATGCTTACTGGGAGCCTAGGCAGCTT +
Preference number: 6 (lower is better)
Translates to: FPHLQTTNNHCR*SHHAYWEPRQL
Trigger: AAGCTGCCTAGGCTCCCAGTAAGCATGATGGGAGCATCTGCAGTGATTATTGGTGGTCTGCAAATGGGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480266.5
CDS CCA 72 bp AATGCGCAACAAGCTCTTTCTTTAGTACCAGGGTCATaGCGTCGTCGGCACACTTTGTCTGGATCAAGGACA +
Preference number: 6 (lower is better)
Translates to: NAQQALSLVPGS*RRRHTLSGSRT
Trigger: TGTCCTTGATCCAGACAAAGTGTGCCGACGACGCCATGACCCTGGTACTAAAGAAAGAGCTTGTTGCGCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
ENST00000486329.1
CDS CAA 90 bp GTGTCTGGGAGCTTGAAGCCACGAATGTTTTTCTCTGGAAAGATCTaGAAGGAGTATTCTCCAGTGGTCCAGATCTGCATGTTGTGGTTG +
Preference number: 6 (lower is better)
Translates to: VSGSLKPRMFFSGKI*KEYSPVVQICMLWL
Trigger: CAACCACAACATGCAGATCTGGACCACTGGAGAATACTCCTTCAAGATCTTTCCAGAGAAAAACATTCGTGGCTTCAAGCTCCCAGACAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5
CDS CCA 72 bp ACCAATAATCACTGCAGATGCTCCCATCATGCTTACTaGGAGCCTAGGCAGCTTTACACGAGTGAACTCATT +
Preference number: 6 (lower is better)
Translates to: TNNHCRCSHHAY*EPRQLYTSELI
Trigger: AATGAGTTCACTCGTGTAAAGCTGCCTAGGCTCCCAGTAAGCATGATGGGAGCATCTGCAGTGATTATTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480266.5
CDS CAA 72 bp AGCTTGAAGCCACGAATGTTTTTCTCTGGAAAGATCTaGAAGGAGTATTCTCCAGTGGTCCAGATCTGCATG +
Preference number: 6 (lower is better)
Translates to: SLKPRMFFSGKI*KEYSPVVQICM
Trigger: CATGCAGATCTGGACCACTGGAGAATACTCCTTCAAGATCTTTCCAGAGAAAAACATTCGTGGCTTCAAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000344849.4
ENST00000373203.9
ENST00000480266.5