RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ENDOU (Homo sapiens)

Ensembl gene IDs: ENSG00000111405

Ensembl transcript IDs: ENST00000229003.7, ENST00000422538.8, ENST00000545824.2, ENST00000551186.1

Found 298 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCTGCACTAAACATCCACAAGTGGGAAACTTCTTGTTGCAGATACTaGGCTGGACACAAAAACACTCAGGCCTGGAGAAGGCCACCCCAC +
Preference number: 1 (lower is better)
Translates to: AALNIHKWETSCCRY*AGHKNTQAWRRPPH
Trigger: GTGGGGTGGCCTTCTCCAGGCCTGAGTGTTTTTGTGTCCAGCTCAGTATCTGCAACAAGAAGTTTCCCACTTGTGGATGTTTAGTGCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000229003.7
ENST00000422538.8
3UTR CCA 90 bp AAAGGACTTCTTCCTAGTTCCCCCACACATCAGGGCAGAGAGCTATaGAGGGTTCCTACCTTCTCTGCTTGGACTCTGTTTCTTAGTCAA +
Preference number: 1 (lower is better)
Translates to: KGLLPSSPTHQGREL*RVPTFSAWTLFLSQ
Trigger: TTGACTAAGAAACAGAGTCCAAGCAGAGAAGGTAGGAACCCTCCATAGCTCTCTGCCCTGATGTGTGGGGGAACTAGGAAGAAGTCCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
3UTR TCA 90 bp GGCACTTTGGGATTTAGGAATGCTTCTCATTGCTTTGAGATTTGGTaGTCCCTTCCAGTCCTCTCCCTCTTCTCTCTAGTCCAGAGAAGA +
Preference number: 1 (lower is better)
Translates to: GTLGFRNASHCFEIW*SLPVLSLFSLVQRR
Trigger: TCTTCTCTGGACTAGAGAGAAGAGGGAGAGGACTGGAAGGGATCACCAAATCTCAAAGCAATGAGAAGCATTCCTAAATCCCAAAGTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
3UTR TCA 90 bp CTTGATTACTGTGGCCTTACTTCTTTGAGGACCCCAACACAGGGCTaGGTGGTAGTTTACAGAGCTGTGTATAATAACAGCCATTATAGT +
Preference number: 1 (lower is better)
Translates to: LDYCGLTSLRTPTQG*VVVYRAVYNNSHYS
Trigger: ACTATAATGGCTGTTATTATACACAGCTCTGTAAACTACCACTCAGCCCTGTGTTGGGGTCCTCAAAGAAGTAAGGCCACAGTAATCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229003.7
ENST00000422538.8
3UTR TCA 90 bp TATAGTAATCTTGAATTTCTATCAGCTGTTCTTCCTAAGAACAACTaGAAACACCTTCACAGTAAAAATATCAGGGTTTGCCCTCTCACC +
Preference number: 1 (lower is better)
Translates to: YSNLEFLSAVLPKNN*KHLHSKNIRVCPLT
Trigger: GGTGAGAGGGCAAACCCTGATATTTTTACTGTGAAGGTGTTTTCAGTTGTTCTTAGGAAGAACAGCTGATAGAAATTCAAGATTACTATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229003.7
ENST00000422538.8
3UTR-3UTR TCA 90 bp ATGAGGCCTGGTGAGGTCAAAGGACTTCTTCCTAGTTCCCCCACACATCAGGGCTGCTTTGAGATTTGGTaGTCCCTTCCAGTCCTCTCC +
Preference number: 2 (lower is better)
Translates to: MRPGEVKGLLPSSPTHQGCFEIW*SLPVLS
Trigger: GGAGAGGACTGGAAGGGATCACCAAATCTCAAAGCA...GCCCTGATGTGTGGGGGAACTAGGAAGAAGTCCTTTGACCTCACCAGGCCTCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
3UTR-3UTR TCA 90 bp ACACCCGGCTCTGTGGTACAGCATTTAGTTCTCAGTGGGGTTGGGGGACAAATGAAGCATGAGGCCTGGTaGGGTCAAAGGACTTCTTCC +
Preference number: 2 (lower is better)
Translates to: TPGSVVQHLVLSGVGGQMKHEAW*GQRTSS
Trigger: GGAAGAAGTCCTTTGACCTCACCAGGCCTCATGCTT...CATTTGTCCCCCAACCCCACTGAGAACTAAATGCTGTACCACAGAGCCGGGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000229003.7
ENST00000422538.8
3UTR-3UTR TCA 90 bp AAGGGAAGCATGAGGCCTGGTGAGGTCAAAGGACTTCTTCCTAGTTCCCCCACATGCTTTGAGATTTGGTaGTCCCTTCCAGTCCTCTCC +
Preference number: 2 (lower is better)
Translates to: KGSMRPGEVKGLLPSSPTCFEIW*SLPVLS
Trigger: GGAGAGGACTGGAAGGGATCACCAAATCTCAAAGCA...TGTGGGGGAACTAGGAAGAAGTCCTTTGACCTCACCAGGCCTCATGCTTCCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
3UTR-3UTR TCA 90 bp TTCACACCCGGCTCTGTGGTACAGCATTTAGTTCTCAGTGGGGTTGGGGGACAACCAAAGGCCCTTGCTTaGTTACTGTGGCCTTACTTC +
Preference number: 2 (lower is better)
Translates to: FTPGSVVQHLVLSGVGGQPKALA*LLWPYF
Trigger: GAAGTAAGGCCACAGTAATCAAGCAAGGGCCTTTGG...TTGTCCCCCAACCCCACTGAGAACTAAATGCTGTACCACAGAGCCGGGTGTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000229003.7
ENST00000422538.8
3UTR-3UTR GCA 90 bp AGGGCAGAGAGCTATGGAGGGTTCCTACCTTCTCTGCTTGGACTCTGTTTCTTATCGCAAGAGCCCTCATaGCCCTTTCTGGCTCGAAGT +
Preference number: 2 (lower is better)
Translates to: RAESYGGFLPSLLGLCFLSQEPS*PFLARS
Trigger: ACTTCGAGCCAGAAAGGGGCATGAGGGCTCTTGCGA...TAAGAAACAGAGTCCAAGCAGAGAAGGTAGGAACCCTCCATAGCTCTCTGCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
3UTR-3UTR TCA 90 bp TTCACACCCGGCTCTGTGGTACAGCATTTAGTTCTCAGTGGGGTTGGGGGACAATCCCAGACTCTGTTCTaGGAGGATCTAACTCTGGAA +
Preference number: 2 (lower is better)
Translates to: FTPGSVVQHLVLSGVGGQSQTLF*EDLTLE
Trigger: TTCCAGAGTTAGATCCTCTCAGAACAGAGTCTGGGA...TTGTCCCCCAACCCCACTGAGAACTAAATGCTGTACCACAGAGCCGGGTGTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000229003.7
ENST00000422538.8
3UTR-3UTR CCA 90 bp CACATCAGGGCAGAGAGCTATGGAGGGTTCCTACCTTCTCTGCTTGGACTCTGTCCCATGTGGGCACTTTaGGATTTAGGAATGCTTCTC +
Preference number: 2 (lower is better)
Translates to: HIRAESYGGFLPSLLGLCPMWAL*DLGMLL
Trigger: GAGAAGCATTCCTAAATCCCAAAGTGCCCACATGGG...ACAGAGTCCAAGCAGAGAAGGTAGGAACCCTCCATAGCTCTCTGCCCTGATGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
3UTR-3UTR CCA 90 bp AAGGGAAGCATGAGGCCTGGTGAGGTCAAAGGACTTCTTCCTAGTTCCCCCACACCCATGTGGGCACTTTaGGATTTAGGAATGCTTCTC +
Preference number: 2 (lower is better)
Translates to: KGSMRPGEVKGLLPSSPTPMWAL*DLGMLL
Trigger: GAGAAGCATTCCTAAATCCCAAAGTGCCCACATGGG...TGTGGGGGAACTAGGAAGAAGTCCTTTGACCTCACCAGGCCTCATGCTTCCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
3UTR-3UTR CCA 90 bp TCAAAGGACTTCTTCCTAGTTCCCCCACACATCAGGGCAGAGAGCTATGGAGGGCCCATGTGGGCACTTTaGGATTTAGGAATGCTTCTC +
Preference number: 2 (lower is better)
Translates to: SKDFFLVPPHIRAESYGGPMWAL*DLGMLL
Trigger: GAGAAGCATTCCTAAATCCCAAAGTGCCCACATGGG...CCCTCCATAGCTCTCTGCCCTGATGTGTGGGGGAACTAGGAAGAAGTCCTTTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
3UTR-3UTR CCA 90 bp ATGAGGCCTGGTGAGGTCAAAGGACTTCTTCCTAGTTCCCCCACACATCAGGGCTATCTCTTTCCCATGTaGGCACTTTGGGATTTAGGA +
Preference number: 2 (lower is better)
Translates to: MRPGEVKGLLPSSPTHQGYLFPM*ALWDLG
Trigger: TCCTAAATCCCAAAGTGCCCACATGGGAAAGAGATA...GCCCTGATGTGTGGGGGAACTAGGAAGAAGTCCTTTGACCTCACCAGGCCTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
3UTR-3UTR CCA 90 bp GTGGGAAACTTCTTGTTGCAGATACTGAGCTGGACACAAAAACACTCAGGCCTGCAGGGCAGAGAGCTATaGAGGGTTCCTACCTTCTCT +
Preference number: 2 (lower is better)
Translates to: VGNFLLQILSWTQKHSGLQGREL*RVPTFS
Trigger: AGAGAAGGTAGGAACCCTCCATAGCTCTCTGCCCTG...CAGGCCTGAGTGTTTTTGTGTCCAGCTCAGTATCTGCAACAAGAAGTTTCCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229003.7
ENST00000422538.8
3UTR-3UTR CCA 90 bp ACACCCGGCTCTGTGGTACAGCATTTAGTTCTCAGTGGGGTTGGGGGACAAATGTTCTCCATTCAGCATTaGAGTTCTCCCAGACTCTGT +
Preference number: 2 (lower is better)
Translates to: TPGSVVQHLVLSGVGGQMFSIQH*SSPRLC
Trigger: ACAGAGTCTGGGAGAACTCCAATGCTGAATGGAGAA...CATTTGTCCCCCAACCCCACTGAGAACTAAATGCTGTACCACAGAGCCGGGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000229003.7
ENST00000422538.8
3UTR-3UTR TCA 90 bp ATACAAGTCTGTGGCTGCACTAAACATCCACAAGTGGGAAACTTCTTGTTGCAGGTGGCCTTACTTCTTTaGGGACCCCAACACAGGGCT +
Preference number: 2 (lower is better)
Translates to: IQVCGCTKHPQVGNFLLQVALLL*GPQHRA
Trigger: AGCCCTGTGTTGGGGTCCTCAAAGAAGTAAGGCCAC...CTGCAACAAGAAGTTTCCCACTTGTGGATGTTTAGTGCAGCCACAGACTTGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229003.7
ENST00000422538.8
3UTR-3UTR TCA 90 bp TTCACACCCGGCTCTGTGGTACAGCATTTAGTTCTCAGTGGGGTTGGGGGACAATCTTGTTGCAGATACTaGGCTGGACACAAAAACACT +
Preference number: 2 (lower is better)
Translates to: FTPGSVVQHLVLSGVGGQSCCRY*AGHKNT
Trigger: AGTGTTTTTGTGTCCAGCTCAGTATCTGCAACAAGA...TTGTCCCCCAACCCCACTGAGAACTAAATGCTGTACCACAGAGCCGGGTGTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000229003.7
ENST00000422538.8
3UTR-3UTR GCA 90 bp TGGGCACTTTGGGATTTAGGAATGCTTCTCATTGCTTTGAGATTTGGTGATCCCTCGCAAGAGCCCTCATaGCCCTTTCTGGCTCGAAGT +
Preference number: 2 (lower is better)
Translates to: WALWDLGMLLIALRFGDPSQEPS*PFLARS
Trigger: ACTTCGAGCCAGAAAGGGGCATGAGGGCTCTTGCGA...GGGATCACCAAATCTCAAAGCAATGAGAAGCATTCCTAAATCCCAAAGTGCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
3UTR CAA 90 bp CAAGTCTGTGGCTGCACTAAACATCCACAAGTGGGAAACTTCTTGTaGCAGATACTGAGCTGGACACAAAAACACTCAGGCCTGGAGAAG +
Preference number: 2 (lower is better)
Translates to: QVCGCTKHPQVGNFL*QILSWTQKHSGLEK
Trigger: CTTCTCCAGGCCTGAGTGTTTTTGTGTCCAGCTCAGTATCTGCAACAAGAAGTTTCCCACTTGTGGATGTTTAGTGCAGCCACAGACTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229003.7
ENST00000422538.8
3UTR-3UTR GCA 90 bp TACAGTCTCTCTGGTCTCGTAGAGTTATTCAAATTATGGCTGCTGGATAAGGCTTCGCAAGAGCCCTCATaGCCCTTTCTGGCTCGAAGT +
Preference number: 2 (lower is better)
Translates to: YSLSGLVELFKLWLLDKASQEPS*PFLARS
Trigger: ACTTCGAGCCAGAAAGGGGCATGAGGGCTCTTGCGA...AGCCTTATCCAGCAGCCATAATTTGAATAACTCTACGAGACCAGAGAGACTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229003.7
ENST00000422538.8
3UTR CAA 90 bp ATACAAGTCTGTGGCTGCACTAAACATCCACAAGTGGGAAACTTCTaGTTGCAGATACTGAGCTGGACACAAAAACACTCAGGCCTGGAG +
Preference number: 2 (lower is better)
Translates to: IQVCGCTKHPQVGNF*LQILSWTQKHSGLE
Trigger: CTCCAGGCCTGAGTGTTTTTGTGTCCAGCTCAGTATCTGCAACAAGAAGTTTCCCACTTGTGGATGTTTAGTGCAGCCACAGACTTGTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229003.7
ENST00000422538.8
3UTR-3UTR TCA 90 bp ATACAAGTCTGTGGCTGCACTAAACATCCACAAGTGGGAAACTTCTTGTTGCAGTGCTTTGAGATTTGGTaGTCCCTTCCAGTCCTCTCC +
Preference number: 2 (lower is better)
Translates to: IQVCGCTKHPQVGNFLLQCFEIW*SLPVLS
Trigger: GGAGAGGACTGGAAGGGATCACCAAATCTCAAAGCA...CTGCAACAAGAAGTTTCCCACTTGTGGATGTTTAGTGCAGCCACAGACTTGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229003.7
ENST00000422538.8
3UTR-3UTR TCA 90 bp TACAGTCTCTCTGGTCTCGTAGAGTTATTCAAATTATGGCTGCTGGATAAGGCTACCCCAACACAGGGCTaGGTGGTAGTTTACAGAGCT +
Preference number: 2 (lower is better)
Translates to: YSLSGLVELFKLWLLDKATPTQG*VVVYRA
Trigger: AGCTCTGTAAACTACCACTCAGCCCTGTGTTGGGGT...AGCCTTATCCAGCAGCCATAATTTGAATAACTCTACGAGACCAGAGAGACTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229003.7
ENST00000422538.8
3UTR-3UTR GCA 90 bp GGAAACTTCTTGTTGCAGATACTGAGCTGGACACAAAAACACTCAGGCCTGGAGAAAACCAAAGGCCCTTaGTTGATTACTGTGGCCTTA +
Preference number: 2 (lower is better)
Translates to: GNFLLQILSWTQKHSGLEKTKGP*LITVAL
Trigger: TAAGGCCACAGTAATCAAGCAAGGGCCTTTGGTTTT...CTCCAGGCCTGAGTGTTTTTGTGTCCAGCTCAGTATCTGCAACAAGAAGTTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000229003.7
ENST00000422538.8
3UTR-3UTR TCA 90 bp AGCCCATTCACTGCACCAACCTATTACCCTTCTCCATTCAGCATTGGAGTTCTCCTTCCTAAGAACAACTaGAAACACCTTCACAGTAAA +
Preference number: 2 (lower is better)
Translates to: SPFTAPTYYPSPFSIGVLLPKNN*KHLHSK
Trigger: TTTACTGTGAAGGTGTTTTCAGTTGTTCTTAGGAAG...GAGAACTCCAATGCTGAATGGAGAAGGGTAATAGGTTGGTGCAGTGAATGGGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229003.7
ENST00000422538.8
3UTR-3UTR TCA 90 bp ATCAAAATACAAGTCTGTGGCTGCACTAAACATCCACAAGTGGGAAACTTCTTGTCCCAGACTCTGTTCTaGGAGGATCTAACTCTGGAA +
Preference number: 2 (lower is better)
Translates to: IKIQVCGCTKHPQVGNFLSQTLF*EDLTLE
Trigger: TTCCAGAGTTAGATCCTCTCAGAACAGAGTCTGGGA...CAAGAAGTTTCCCACTTGTGGATGTTTAGTGCAGCCACAGACTTGTATTTTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229003.7
ENST00000422538.8
3UTR-3UTR CCA 90 bp TACAGTCTCTCTGGTCTCGTAGAGTTATTCAAATTATGGCTGCTGGATAAGGCTTTGCAGATACTGAGCTaGACACAAAAACACTCAGGC +
Preference number: 2 (lower is better)
Translates to: YSLSGLVELFKLWLLDKALQILS*TQKHSG
Trigger: GCCTGAGTGTTTTTGTGTCCAGCTCAGTATCTGCAA...AGCCTTATCCAGCAGCCATAATTTGAATAACTCTACGAGACCAGAGAGACTGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229003.7
ENST00000422538.8
3UTR-3UTR CCA 90 bp ATCAAAATACAAGTCTGTGGCTGCACTAAACATCCACAAGTGGGAAACTTCTTGTTGCAGATACTGAGCTaGACACAAAAACACTCAGGC +
Preference number: 2 (lower is better)
Translates to: IKIQVCGCTKHPQVGNFLLQILS*TQKHSG
Trigger: GCCTGAGTGTTTTTGTGTCCAGCTCAGTATCTGCAA...CAAGAAGTTTCCCACTTGTGGATGTTTAGTGCAGCCACAGACTTGTATTTTGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000229003.7
ENST00000422538.8
3UTR CCA 72 bp CTTCCTAGTTCCCCCACACATCAGGGCAGAGAGCTATaGAGGGTTCCTACCTTCTCTGCTTGGACTCTGTTT +
Preference number: 3 (lower is better)
Translates to: LPSSPTHQGREL*RVPTFSAWTLF
Trigger: AAACAGAGTCCAAGCAGAGAAGGTAGGAACCCTCCATAGCTCTCTGCCCTGATGTGTGGGGGAACTAGGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
3UTR-3UTR CAA 90 bp ATGAGGCCTGGTGAGGTCAAAGGACTTCTTCCTAGTTCCCCCACACATCAGGGCATGCTTCTCATTGCTTaGAGATTTGGTGATCCCTTC +
Preference number: 3 (lower is better)
Translates to: MRPGEVKGLLPSSPTHQGMLLIA*RFGDPF
Trigger: GAAGGGATCACCAAATCTCAAAGCAATGAGAAGCAT...GCCCTGATGTGTGGGGGAACTAGGAAGAAGTCCTTTGACCTCACCAGGCCTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
3UTR-3UTR CAA 90 bp ACATCAGGGCAGAGAGCTATGGAGGGTTCCTACCTTCTCTGCTTGGACTCTGTTTCCCATGTGGGCACTTaGGGATTTAGGAATGCTTCT +
Preference number: 3 (lower is better)
Translates to: TSGQRAMEGSYLLCLDSVSHVGT*GFRNAS
Trigger: AGAAGCATTCCTAAATCCCAAAGTGCCCACATGGGA...AACAGAGTCCAAGCAGAGAAGGTAGGAACCCTCCATAGCTCTCTGCCCTGATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
3UTR CCA 72 bp GGCAGAGAGCTATGGAGGGTTCCTACCTTCTCTGCTTaGACTCTGTTTCTTAGTCAACATTGCCAAAATTCT +
Preference number: 3 (lower is better)
Translates to: GRELWRVPTFSA*TLFLSQHCQNS
Trigger: AGAATTTTGGCAATGTTGACTAAGAAACAGAGTCCAAGCAGAGAAGGTAGGAACCCTCCATAGCTCTCTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS-3UTR TCA 90 bp CCTGGTGAGGTCAAAGGACTTCTTCCTAGTTCCCCCACACATCAGGGCAGAGAGCCAGCTCCTGGGCACTaGAGTGCTCCCCATGGCCTG +
Preference number: 4 (lower is better)
Translates to: PGEVKGLLPSSPTHQGREPAPGH*SAPHGL
Trigger: CAGGCCATGGGGAGCACTTCAGTGCCCAGGAGCTGG...CTCTCTGCCCTGATGTGTGGGGGAACTAGGAAGAAGTCCTTTGACCTCACCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS-3UTR TCA 90 bp TCAAAGGACTTCTTCCTAGTTCCCCCACACATCAGGGCAGAGAGCTATGGAGGGCCAGCTCCTGGGCACTaGAGTGCTCCCCATGGCCTG +
Preference number: 4 (lower is better)
Translates to: SKDFFLVPPHIRAESYGGPAPGH*SAPHGL
Trigger: CAGGCCATGGGGAGCACTTCAGTGCCCAGGAGCTGG...CCCTCCATAGCTCTCTGCCCTGATGTGTGGGGGAACTAGGAAGAAGTCCTTTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS-3UTR TCA 90 bp AAGGGAAGCATGAGGCCTGGTGAGGTCAAAGGACTTCTTCCTAGTTCCCCCACACCAGCTCCTGGGCACTaGAGTGCTCCCCATGGCCTG +
Preference number: 4 (lower is better)
Translates to: KGSMRPGEVKGLLPSSPTPAPGH*SAPHGL
Trigger: CAGGCCATGGGGAGCACTTCAGTGCCCAGGAGCTGG...TGTGGGGGAACTAGGAAGAAGTCCTTTGACCTCACCAGGCCTCATGCTTCCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS-3UTR GCA 90 bp CACATCAGGGCAGAGAGCTATGGAGGGTTCCTACCTTCTCTGCTTGGACTCTGTCTGAGGAAGGCGTCCTaGTCGGCCAGCTCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: HIRAESYGGFLPSLLGLCLRKAS*SASSWA
Trigger: TGCCCAGGAGCTGGCCGAGCAGGACGCCTTCCTCAG...ACAGAGTCCAAGCAGAGAAGGTAGGAACCCTCCATAGCTCTCTGCCCTGATGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS-3UTR CCA 90 bp ATGAGGCCTGGTGAGGTCAAAGGACTTCTTCCTAGTTCCCCCACACATCAGGGCGGCCCTGGCAGGAGGTaGGTGCCGAGTACAAGTCAG +
Preference number: 4 (lower is better)
Translates to: MRPGEVKGLLPSSPTHQGGPGRR*VPSTSQ
Trigger: CTGACTTGTACTCGGCACCCACCTCCTGCCAGGGCC...GCCCTGATGTGTGGGGGAACTAGGAAGAAGTCCTTTGACCTCACCAGGCCTCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545824.2
CDS-3UTR TCA 90 bp CCTGGTGAGGTCAAAGGACTTCTTCCTAGTTCCCCCACACATCAGGGCAGAGAGTGCCTGGCCTGGCGATaGAGCACAGGGAGTAGAGTG +
Preference number: 4 (lower is better)
Translates to: PGEVKGLLPSSPTHQGRECLAWR*STGSRV
Trigger: CACTCTACTCCCTGTGCTTCATCGCCAGGCCAGGCA...CTCTCTGCCCTGATGTGTGGGGGAACTAGGAAGAAGTCCTTTGACCTCACCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS-3UTR GCA 90 bp CCTGGTGAGGTCAAAGGACTTCTTCCTAGTTCCCCCACACATCAGGGCAGAGAGCTGGCAGGAGGTGGGTaGCGAGTACAAGTTGCTGGC +
Preference number: 4 (lower is better)
Translates to: PGEVKGLLPSSPTHQGRELAGGG*RVQVAG
Trigger: GCCAGCAACTTGTACTCGGCACCCACCTCCTGCCAG...CTCTCTGCCCTGATGTGTGGGGGAACTAGGAAGAAGTCCTTTGACCTCACCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229003.7
ENST00000422538.8
CDS-3UTR GCA 90 bp ACATCAGGGCAGAGAGCTATGGAGGGTTCCTACCTTCTCTGCTTGGACTCTGTTCTGAGGAAGGCGTCCTaGTCGGCCAGCTCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: TSGQRAMEGSYLLCLDSVLRKAS*SASSWA
Trigger: TGCCCAGGAGCTGGCCGAGCAGGACGCCTTCCTCAG...AACAGAGTCCAAGCAGAGAAGGTAGGAACCCTCCATAGCTCTCTGCCCTGATGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS-3UTR CCA 90 bp GGTGAGGTCAAAGGACTTCTTCCTAGTTCCCCCACACATCAGGGCAGAGAGCTAGGCCCTGGCAGGAGGTaGGTGCCGAGTACAAGTTGC +
Preference number: 4 (lower is better)
Translates to: GEVKGLLPSSPTHQGRELGPGRR*VPSTSC
Trigger: GCAACTTGTACTCGGCACCCACCTCCTGCCAGGGCC...TAGCTCTCTGCCCTGATGTGTGGGGGAACTAGGAAGAAGTCCTTTGACCTCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229003.7
ENST00000422538.8
CDS-3UTR CCA 90 bp GTGGGCAAACCCCTTCCCTTTACATTAAAGGGAAGCATGAGGCCTGGTGAGGTCTGCTCGGCCAGCTCCTaGGCACTGAAGTGCTCCCCA +
Preference number: 4 (lower is better)
Translates to: VGKPLPFTLKGSMRPGEVCSASS*ALKCSP
Trigger: TGGGGAGCACTTCAGTGCCCAGGAGCTGGCCGAGCA...GACCTCACCAGGCCTCATGCTTCCCTTTAATGTAAAGGGAAGGGGTTTGCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229003.7
ENST00000422538.8
CDS-3UTR CCA 90 bp TCAAAGGACTTCTTCCTAGTTCCCCCACACATCAGGGCAGAGAGCTATGGAGGGTGCTCGGCCAGCTCCTaGGCACTGAAGTGCTCCCCA +
Preference number: 4 (lower is better)
Translates to: SKDFFLVPPHIRAESYGGCSASS*ALKCSP
Trigger: TGGGGAGCACTTCAGTGCCCAGGAGCTGGCCGAGCA...CCCTCCATAGCTCTCTGCCCTGATGTGTGGGGGAACTAGGAAGAAGTCCTTTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS-3UTR CCA 90 bp GATAGCACTTCAGTCTCGCAAGAGCCCTCATGCCCCTTTCTGGCTCGAAGTTCTTGCTCGGCCAGCTCCTaGGCACTGAAGTGCTCCCCA +
Preference number: 4 (lower is better)
Translates to: DSTSVSQEPSCPFLARSSCSASS*ALKCSP
Trigger: TGGGGAGCACTTCAGTGCCCAGGAGCTGGCCGAGCA...AGAACTTCGAGCCAGAAAGGGGCATGAGGGCTCTTGCGAGACTGAAGTGCTATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS-3UTR TCA 90 bp GATAGCACTTCAGTCTCGCAAGAGCCCTCATGCCCCTTTCTGGCTCGAAGTTCTTGCCTGGCCTGGCGATaGAGCACAGGGAGTAGAGTG +
Preference number: 4 (lower is better)
Translates to: DSTSVSQEPSCPFLARSSCLAWR*STGSRV
Trigger: CACTCTACTCCCTGTGCTTCATCGCCAGGCCAGGCA...AGAACTTCGAGCCAGAAAGGGGCATGAGGGCTCTTGCGAGACTGAAGTGCTATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS-3UTR GCA 90 bp AGGCCTGGTGAGGTCAAAGGACTTCTTCCTAGTTCCCCCACACATCAGGGCAGACTCCCCATGGCCTGTTaGCCGCTGGTAGTTGTTGAG +
Preference number: 4 (lower is better)
Translates to: RPGEVKGLLPSSPTHQGRLPMAC*PLVVVE
Trigger: CTCAACAACTACCAGCGGGCAACAGGCCATGGGGAG...TCTGCCCTGATGTGTGGGGGAACTAGGAAGAAGTCCTTTGACCTCACCAGGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS-3UTR GCA 90 bp TCAAAGGACTTCTTCCTAGTTCCCCCACACATCAGGGCAGAGAGCTATGGAGGGTCCTGGGCACTGAAGTaGTCCCCATGGCCTGTTGCC +
Preference number: 4 (lower is better)
Translates to: SKDFFLVPPHIRAESYGGSWALK*SPWPVA
Trigger: GGCAACAGGCCATGGGGAGCACTTCAGTGCCCAGGA...CCCTCCATAGCTCTCTGCCCTGATGTGTGGGGGAACTAGGAAGAAGTCCTTTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS-3UTR GCA 90 bp AAGGGAAGCATGAGGCCTGGTGAGGTCAAAGGACTTCTTCCTAGTTCCCCCACATCCTGGGCACTGAAGTaGTCCCCATGGCCTGTTGCC +
Preference number: 4 (lower is better)
Translates to: KGSMRPGEVKGLLPSSPTSWALK*SPWPVA
Trigger: GGCAACAGGCCATGGGGAGCACTTCAGTGCCCAGGA...TGTGGGGGAACTAGGAAGAAGTCCTTTGACCTCACCAGGCCTCATGCTTCCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS-3UTR GCA 90 bp ATGAGGCCTGGTGAGGTCAAAGGACTTCTTCCTAGTTCCCCCACACATCAGGGCCCGTCCCAGTTGAACTaGATTGCCAGCACATCGGGG +
Preference number: 4 (lower is better)
Translates to: MRPGEVKGLLPSSPTHQGPSQLN*IASTSG
Trigger: CCCCGATGTGCTGGCAATGCAGTTCAACTGGGACGG...GCCCTGATGTGTGGGGGAACTAGGAAGAAGTCCTTTGACCTCACCAGGCCTCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS-3UTR GCA 90 bp CCTGGTGAGGTCAAAGGACTTCTTCCTAGTTCCCCCACACATCAGGGCAGAGAGTCACAGCAGTTCCCATaGCAGAGACACCGGCGGTCA +
Preference number: 4 (lower is better)
Translates to: PGEVKGLLPSSPTHQGRESQQFP*QRHRRS
Trigger: TGACCGCCGGTGTCTCTGGCATGGGAACTGCTGTGA...CTCTCTGCCCTGATGTGTGGGGGAACTAGGAAGAAGTCCTTTGACCTCACCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000422538.8
CDS-3UTR GCA 90 bp AAGGGAAGCATGAGGCCTGGTGAGGTCAAAGGACTTCTTCCTAGTTCCCCCACACTGGCAGGAGGTGGGTaGCGAGTACAAGTCAGCCCA +
Preference number: 4 (lower is better)
Translates to: KGSMRPGEVKGLLPSSPTLAGGG*RVQVSP
Trigger: TGGGCTGACTTGTACTCGGCACCCACCTCCTGCCAG...TGTGGGGGAACTAGGAAGAAGTCCTTTGACCTCACCAGGCCTCATGCTTCCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545824.2
CDS-3UTR TCA 90 bp AGGCCTGGTGAGGTCAAAGGACTTCTTCCTAGTTCCCCCACACATCAGGGCAGACTGTGGCAATGGCTCTaGCTCTTTGTGGTCCTCAGC +
Preference number: 4 (lower is better)
Translates to: RPGEVKGLLPSSPTHQGRLWQWL*LFVVLS
Trigger: GCTGAGGACCACAAAGAGTCAGAGCCATTGCCACAG...TCTGCCCTGATGTGTGGGGGAACTAGGAAGAAGTCCTTTGACCTCACCAGGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000229003.7
CDS-3UTR GCA 90 bp AGGCCTGGTGAGGTCAAAGGACTTCTTCCTAGTTCCCCCACACATCAGGGCAGATGCAGGCCCTCATGGTaGCCAGTTGGAGGCCAAAAA +
Preference number: 4 (lower is better)
Translates to: RPGEVKGLLPSSPTHQGRCRPSW*PVGGQK
Trigger: TTTTTGGCCTCCAACTGGGCACCATGAGGGCCTGCA...TCTGCCCTGATGTGTGGGGGAACTAGGAAGAAGTCCTTTGACCTCACCAGGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS-3UTR GCA 90 bp GTGGGCAAACCCCTTCCCTTTACATTAAAGGGAAGCATGAGGCCTGGTGAGGTCCCAATACCAGGGAGATaGAGGCCCTCATGGTGCCCA +
Preference number: 4 (lower is better)
Translates to: VGKPLPFTLKGSMRPGEVPIPGR*RPSWCP
Trigger: TGGGCACCATGAGGGCCTGCATCTCCCTGGTATTGG...GACCTCACCAGGCCTCATGCTTCCCTTTAATGTAAAGGGAAGGGGTTTGCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229003.7
ENST00000422538.8
CDS-3UTR GCA 90 bp TCAAAGGACTTCTTCCTAGTTCCCCCACACATCAGGGCAGAGAGCTATGGAGGGCCAATACCAGGGAGATaGAGGCCCTCATGGTGCCCA +
Preference number: 4 (lower is better)
Translates to: SKDFFLVPPHIRAESYGGPIPGR*RPSWCP
Trigger: TGGGCACCATGAGGGCCTGCATCTCCCTGGTATTGG...CCCTCCATAGCTCTCTGCCCTGATGTGTGGGGGAACTAGGAAGAAGTCCTTTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS-3UTR GCA 90 bp CTTCTCTCTAGTCCAGAGAAGATAGCACTTCAGTCTCGCAAGAGCCCTCATGCCCTGGCAGGAGGTGGGTaGCGAGTACAAGTTGCTGGC +
Preference number: 4 (lower is better)
Translates to: LLSSPEKIALQSRKSPHALAGGG*RVQVAG
Trigger: GCCAGCAACTTGTACTCGGCACCCACCTCCTGCCAG...GGCATGAGGGCTCTTGCGAGACTGAAGTGCTATCTTCTCTGGACTAGAGAGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229003.7
ENST00000422538.8
CDS-3UTR GCA 90 bp CACATCAGGGCAGAGAGCTATGGAGGGTTCCTACCTTCTCTGCTTGGACTCTGTCTCCCCATGGCCTGTTaGCCGCTGGTAGTTGTTGAG +
Preference number: 4 (lower is better)
Translates to: HIRAESYGGFLPSLLGLCLPMAC*PLVVVE
Trigger: CTCAACAACTACCAGCGGGCAACAGGCCATGGGGAG...ACAGAGTCCAAGCAGAGAAGGTAGGAACCCTCCATAGCTCTCTGCCCTGATGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS-3UTR GCA 90 bp AAGGGAAGCATGAGGCCTGGTGAGGTCAAAGGACTTCTTCCTAGTTCCCCCACACCGTCCCAGTTGAACTaGATTGCCAGCACATCGGGG +
Preference number: 4 (lower is better)
Translates to: KGSMRPGEVKGLLPSSPTPSQLN*IASTSG
Trigger: CCCCGATGTGCTGGCAATGCAGTTCAACTGGGACGG...TGTGGGGGAACTAGGAAGAAGTCCTTTGACCTCACCAGGCCTCATGCTTCCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS-3UTR GCA 90 bp AGGCCTGGTGAGGTCAAAGGACTTCTTCCTAGTTCCCCCACACATCAGGGCAGATCGCAAGAGCCCTCATaGCCCTTTCTGGCTCGAAGT +
Preference number: 4 (lower is better)
Translates to: RPGEVKGLLPSSPTHQGRSQEPS*PFLARS
Trigger: ACTTCGAGCCAGAAAGGGGCATGAGGGCTCTTGCGA...TCTGCCCTGATGTGTGGGGGAACTAGGAAGAAGTCCTTTGACCTCACCAGGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS-3UTR CCA 90 bp ACATCAGGGCAGAGAGCTATGGAGGGTTCCTACCTTCTCTGCTTGGACTCTGTTGGCTCTGACTCTTTGTaGTCCTCAGCCCAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: TSGQRAMEGSYLLCLDSVGSDSL*SSAQAR
Trigger: CCTGGCCTGGGCTGAGGACCACAAAGAGTCAGAGCC...AACAGAGTCCAAGCAGAGAAGGTAGGAACCCTCCATAGCTCTCTGCCCTGATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000229003.7
CDS-3UTR CCA 90 bp GATAGCACTTCAGTCTCGCAAGAGCCCTCATGCCCCTTTCTGGCTCGAAGTTCTCTGGCACACTTTGCCTaGCCTGGCGATGAAGCACAG +
Preference number: 4 (lower is better)
Translates to: DSTSVSQEPSCPFLARSSLAHFA*PGDEAQ
Trigger: CTGTGCTTCATCGCCAGGCCAGGCAAAGTGTGCCAG...AGAACTTCGAGCCAGAAAGGGGCATGAGGGCTCTTGCGAGACTGAAGTGCTATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS-3UTR CCA 90 bp ACCCGGCTCTGTGGTACAGCATTTAGTTCTCAGTGGGGTTGGGGGACAAATGCACTGGCACACTTTGCCTaGCCTGGCGATGAAGCACAG +
Preference number: 4 (lower is better)
Translates to: TRLCGTAFSSQWGWGTNALAHFA*PGDEAQ
Trigger: CTGTGCTTCATCGCCAGGCCAGGCAAAGTGTGCCAG...TGCATTTGTCCCCCAACCCCACTGAGAACTAAATGCTGTACCACAGAGCCGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000229003.7
ENST00000422538.8
CDS-3UTR CCA 90 bp TTCACACCCGGCTCTGTGGTACAGCATTTAGTTCTCAGTGGGGTTGGGGGACAAAAAAACACTCAGGCCTaGAGAAGGCCACCCCACCCC +
Preference number: 4 (lower is better)
Translates to: FTPGSVVQHLVLSGVGGQKNTQA*RRPPHP
Trigger: GGGGTGGGGTGGCCTTCTCCAGGCCTGAGTGTTTTT...TTGTCCCCCAACCCCACTGAGAACTAAATGCTGTACCACAGAGCCGGGTGTGAA
56% GC, longest homopolymer 7 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000229003.7
ENST00000422538.8
CDS-3UTR CCA 90 bp GTGGGCAAACCCCTTCCCTTTACATTAAAGGGAAGCATGAGGCCTGGTGAGGTCAAAAACACTCAGGCCTaGAGAAGGCCACCCCACCCC +
Preference number: 4 (lower is better)
Translates to: VGKPLPFTLKGSMRPGEVKNTQA*RRPPHP
Trigger: GGGGTGGGGTGGCCTTCTCCAGGCCTGAGTGTTTTT...GACCTCACCAGGCCTCATGCTTCCCTTTAATGTAAAGGGAAGGGGTTTGCCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000229003.7
ENST00000422538.8
CDS-3UTR CCA 90 bp GGAAACTTCTTGTTGCAGATACTGAGCTGGACACAAAAACACTCAGGCCTGGAGCACCGGCGGTCACACTaGCAGGCAGCGTCCCGGTTA +
Preference number: 4 (lower is better)
Translates to: GNFLLQILSWTQKHSGLEHRRSH*QAASRL
Trigger: TAACCGGGACGCTGCCTGCCAGTGTGACCGCCGGTG...CTCCAGGCCTGAGTGTTTTTGTGTCCAGCTCAGTATCTGCAACAAGAAGTTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000422538.8
CDS-3UTR TCA 90 bp TCAAAGGACTTCTTCCTAGTTCCCCCACACATCAGGGCAGAGAGCTATGGAGGGCAGCGGGCATTGCAGTaGCATTGGTGGTGCTTGTCA +
Preference number: 4 (lower is better)
Translates to: SKDFFLVPPHIRAESYGGQRALQ*HWWCLS
Trigger: TGACAAGCACCACCAATGTCACTGCAATGCCCGCTG...CCCTCCATAGCTCTCTGCCCTGATGTGTGGGGGAACTAGGAAGAAGTCCTTTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS-3UTR TCA 90 bp TCAAAGGACTTCTTCCTAGTTCCCCCACACATCAGGGCAGAGAGCTATGGAGGGGTGGCCTTACTTCTTTaGGGACCCCAACACAGGGCT +
Preference number: 4 (lower is better)
Translates to: SKDFFLVPPHIRAESYGGVALLL*GPQHRA
Trigger: AGCCCTGTGTTGGGGTCCTCAAAGAAGTAAGGCCAC...CCCTCCATAGCTCTCTGCCCTGATGTGTGGGGGAACTAGGAAGAAGTCCTTTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000229003.7
ENST00000422538.8
CDS-3UTR GCA 90 bp CACATCAGGGCAGAGAGCTATGGAGGGTTCCTACCTTCTCTGCTTGGACTCTGTTGCAGGCCCTCATGGTaGCCAGTTGGAGGCCAAAAA +
Preference number: 4 (lower is better)
Translates to: HIRAESYGGFLPSLLGLCCRPSW*PVGGQK
Trigger: TTTTTGGCCTCCAACTGGGCACCATGAGGGCCTGCA...ACAGAGTCCAAGCAGAGAAGGTAGGAACCCTCCATAGCTCTCTGCCCTGATGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS-3UTR GCA 90 bp TCAAAGGACTTCTTCCTAGTTCCCCCACACATCAGGGCAGAGAGCTATGGAGGGCTTGGCAGCGGGCATTaGAGTGACATTGGTGGTGCT +
Preference number: 4 (lower is better)
Translates to: SKDFFLVPPHIRAESYGGLGSGH*SDIGGA
Trigger: AGCACCACCAATGTCACTGCAATGCCCGCTGCCAAG...CCCTCCATAGCTCTCTGCCCTGATGTGTGGGGGAACTAGGAAGAAGTCCTTTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS-3UTR GCA 90 bp ACATCAGGGCAGAGAGCTATGGAGGGTTCCTACCTTCTCTGCTTGGACTCTGTTCTCCCCATGGCCTGTTaGCCGCTGGTAGTTGTTGAG +
Preference number: 4 (lower is better)
Translates to: TSGQRAMEGSYLLCLDSVLPMAC*PLVVVE
Trigger: CTCAACAACTACCAGCGGGCAACAGGCCATGGGGAG...AACAGAGTCCAAGCAGAGAAGGTAGGAACCCTCCATAGCTCTCTGCCCTGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS-3UTR GCA 90 bp ACATCAGGGCAGAGAGCTATGGAGGGTTCCTACCTTCTCTGCTTGGACTCTGTTCCGTCCCAGTTGAACTaGATTGCCAGCACATCGGGG +
Preference number: 4 (lower is better)
Translates to: TSGQRAMEGSYLLCLDSVPSQLN*IASTSG
Trigger: CCCCGATGTGCTGGCAATGCAGTTCAACTGGGACGG...AACAGAGTCCAAGCAGAGAAGGTAGGAACCCTCCATAGCTCTCTGCCCTGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS-3UTR GCA 90 bp ACCCGGCTCTGTGGTACAGCATTTAGTTCTCAGTGGGGTTGGGGGACAAATGCATCGCAAGAGCCCTCATaGCCCTTTCTGGCTCGAAGT +
Preference number: 4 (lower is better)
Translates to: TRLCGTAFSSQWGWGTNASQEPS*PFLARS
Trigger: ACTTCGAGCCAGAAAGGGGCATGAGGGCTCTTGCGA...TGCATTTGTCCCCCAACCCCACTGAGAACTAAATGCTGTACCACAGAGCCGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000229003.7
ENST00000422538.8
CDS-3UTR CCA 90 bp GTCAAAGGACTTCTTCCTAGTTCCCCCACACATCAGGGCAGAGAGCTATGGAGGCTCATGGTGCCCAGTTaGAGGCCAAAAAGGGAGTGG +
Preference number: 4 (lower is better)
Translates to: VKGLLPSSPTHQGRELWRLMVPS*RPKREW
Trigger: CCACTCCCTTTTTGGCCTCCAACTGGGCACCATGAG...CCTCCATAGCTCTCTGCCCTGATGTGTGGGGGAACTAGGAAGAAGTCCTTTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS-3UTR CCA 90 bp ATGAGGCCTGGTGAGGTCAAAGGACTTCTTCCTAGTTCCCCCACACATCAGGGCATGGCATCACTGCTGTaGGAGACCTCGTGGTCACTA +
Preference number: 4 (lower is better)
Translates to: MRPGEVKGLLPSSPTHQGMASLL*ETSWSL
Trigger: TAGTGACCACGAGGTCTCCCACAGCAGTGATGCCAT...GCCCTGATGTGTGGGGGAACTAGGAAGAAGTCCTTTGACCTCACCAGGCCTCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS-3UTR TCA 90 bp CACATCAGGGCAGAGAGCTATGGAGGGTTCCTACCTTCTCTGCTTGGACTCTGTACCCCAACACAGGGCTaGGTGGTAGTTTACAGAGCT +
Preference number: 4 (lower is better)
Translates to: HIRAESYGGFLPSLLGLCTPTQG*VVVYRA
Trigger: AGCTCTGTAAACTACCACTCAGCCCTGTGTTGGGGT...ACAGAGTCCAAGCAGAGAAGGTAGGAACCCTCCATAGCTCTCTGCCCTGATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229003.7
ENST00000422538.8
CDS-3UTR GCA 90 bp GTGGGCAAACCCCTTCCCTTTACATTAAAGGGAAGCATGAGGCCTGGTGAGGTCCCCCAGCCCATTCACTaGACCAACCTATTACCCTTC +
Preference number: 4 (lower is better)
Translates to: VGKPLPFTLKGSMRPGEVPQPIH*TNLLPF
Trigger: GAAGGGTAATAGGTTGGTGCAGTGAATGGGCTGGGG...GACCTCACCAGGCCTCATGCTTCCCTTTAATGTAAAGGGAAGGGGTTTGCCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000229003.7
ENST00000422538.8
CDS-3UTR GCA 90 bp TCAAAGGACTTCTTCCTAGTTCCCCCACACATCAGGGCAGAGAGCTATGGAGGGCCCCAGCCCATTCACTaGACCAACCTATTACCCTTC +
Preference number: 4 (lower is better)
Translates to: SKDFFLVPPHIRAESYGGPQPIH*TNLLPF
Trigger: GAAGGGTAATAGGTTGGTGCAGTGAATGGGCTGGGG...CCCTCCATAGCTCTCTGCCCTGATGTGTGGGGGAACTAGGAAGAAGTCCTTTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000229003.7
ENST00000422538.8
CDS-3UTR CCA 90 bp GATAGCACTTCAGTCTCGCAAGAGCCCTCATGCCCCTTTCTGGCTCGAAGTTCTAGACACCAGGACTTGTaGAGCTGGTGTCTCCAGATC +
Preference number: 4 (lower is better)
Translates to: DSTSVSQEPSCPFLARSSRHQDL*SWCLQI
Trigger: GATCTGGAGACACCAGCTCCACAAGTCCTGGTGTCT...AGAACTTCGAGCCAGAAAGGGGCATGAGGGCTCTTGCGAGACTGAAGTGCTATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000229003.7
CDS-3UTR CCA 90 bp GATAGCACTTCAGTCTCGCAAGAGCCCTCATGCCCCTTTCTGGCTCGAAGTTCTATGGCATCACTGCTGTaGGAGACCTCGTGGTCACTA +
Preference number: 4 (lower is better)
Translates to: DSTSVSQEPSCPFLARSSMASLL*ETSWSL
Trigger: TAGTGACCACGAGGTCTCCCACAGCAGTGATGCCAT...AGAACTTCGAGCCAGAAAGGGGCATGAGGGCTCTTGCGAGACTGAAGTGCTATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS-3UTR CCA 90 bp AAGGGAAGCATGAGGCCTGGTGAGGTCAAAGGACTTCTTCCTAGTTCCCCCACAGATCCACTTGGTTTCTaGTCTCTGACGGGGAGATGC +
Preference number: 4 (lower is better)
Translates to: KGSMRPGEVKGLLPSSPTDPLGF*SLTGRC
Trigger: GCATCTCCCCGTCAGAGACCAGAAACCAAGTGGATC...TGTGGGGGAACTAGGAAGAAGTCCTTTGACCTCACCAGGCCTCATGCTTCCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS-3UTR CCA 90 bp GATAGCACTTCAGTCTCGCAAGAGCCCTCATGCCCCTTTCTGGCTCGAAGTTCTGATCCACTTGGTTTCTaGTCTCTGACGGGGAGATGC +
Preference number: 4 (lower is better)
Translates to: DSTSVSQEPSCPFLARSSDPLGF*SLTGRC
Trigger: GCATCTCCCCGTCAGAGACCAGAAACCAAGTGGATC...AGAACTTCGAGCCAGAAAGGGGCATGAGGGCTCTTGCGAGACTGAAGTGCTATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS-3UTR CCA 90 bp ATGAGGCCTGGTGAGGTCAAAGGACTTCTTCCTAGTTCCCCCACACATCAGGGCGACATAAGTGAAGAGTaGCTTTGGGCAGCGATCCAC +
Preference number: 4 (lower is better)
Translates to: MRPGEVKGLLPSSPTHQGDISEE*LWAAIH
Trigger: GTGGATCGCTGCCCAAAGCCACTCTTCACTTATGTC...GCCCTGATGTGTGGGGGAACTAGGAAGAAGTCCTTTGACCTCACCAGGCCTCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS-3UTR CCA 90 bp CCTGGTGAGGTCAAAGGACTTCTTCCTAGTTCCCCCACACATCAGGGCAGAGAGGACATAAGTGAAGAGTaGCTTTGGGCAGCGATCCAC +
Preference number: 4 (lower is better)
Translates to: PGEVKGLLPSSPTHQGREDISEE*LWAAIH
Trigger: GTGGATCGCTGCCCAAAGCCACTCTTCACTTATGTC...CTCTCTGCCCTGATGTGTGGGGGAACTAGGAAGAAGTCCTTTGACCTCACCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS-3UTR CCA 90 bp AAGGGAAGCATGAGGCCTGGTGAGGTCAAAGGACTTCTTCCTAGTTCCCCCACACAGGGCAGAGAGCTATaGAGGGTTCCTACCTTCTCT +
Preference number: 4 (lower is better)
Translates to: KGSMRPGEVKGLLPSSPTQGREL*RVPTFS
Trigger: AGAGAAGGTAGGAACCCTCCATAGCTCTCTGCCCTG...TGTGGGGGAACTAGGAAGAAGTCCTTTGACCTCACCAGGCCTCATGCTTCCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS-3UTR CCA 90 bp CACATCAGGGCAGAGAGCTATGGAGGGTTCCTACCTTCTCTGCTTGGACTCTGTCAGGGCAGAGAGCTATaGAGGGTTCCTACCTTCTCT +
Preference number: 4 (lower is better)
Translates to: HIRAESYGGFLPSLLGLCQGREL*RVPTFS
Trigger: AGAGAAGGTAGGAACCCTCCATAGCTCTCTGCCCTG...ACAGAGTCCAAGCAGAGAAGGTAGGAACCCTCCATAGCTCTCTGCCCTGATGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS-3UTR TCA 90 bp GATAGCACTTCAGTCTCGCAAGAGCCCTCATGCCCCTTTCTGGCTCGAAGTTCTTTGGTTTCTGGTCTCTaGCGGGGAGATGCAGTTTTG +
Preference number: 4 (lower is better)
Translates to: DSTSVSQEPSCPFLARSSLVSGL*RGDAVL
Trigger: CAAAACTGCATCTCCCCGTCAGAGACCAGAAACCAA...AGAACTTCGAGCCAGAAAGGGGCATGAGGGCTCTTGCGAGACTGAAGTGCTATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS-3UTR TCA 90 bp AAGGGAAGCATGAGGCCTGGTGAGGTCAAAGGACTTCTTCCTAGTTCCCCCACATTGGTTTCTGGTCTCTaGCGGGGAGATGCAGTTTTG +
Preference number: 4 (lower is better)
Translates to: KGSMRPGEVKGLLPSSPTLVSGL*RGDAVL
Trigger: CAAAACTGCATCTCCCCGTCAGAGACCAGAAACCAA...TGTGGGGGAACTAGGAAGAAGTCCTTTGACCTCACCAGGCCTCATGCTTCCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS-3UTR TCA 90 bp ACACCCGGCTCTGTGGTACAGCATTTAGTTCTCAGTGGGGTTGGGGGACAAATGGACAAACTCTTGCTCTaGGCCATAGCGATTCTGGTG +
Preference number: 4 (lower is better)
Translates to: TPGSVVQHLVLSGVGGQMDKLLL*AIAILV
Trigger: CACCAGAATCGCTATGGCTCAGAGCAAGAGTTTGTC...CATTTGTCCCCCAACCCCACTGAGAACTAAATGCTGTACCACAGAGCCGGGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000229003.7
ENST00000422538.8
CDS-3UTR TCA 90 bp ACATCAGGGCAGAGAGCTATGGAGGGTTCCTACCTTCTCTGCTTGGACTCTGTTAGTAGCCGTCCCAGTTaGACTGCATTGCCAGCACAT +
Preference number: 4 (lower is better)
Translates to: TSGQRAMEGSYLLCLDSVSSRPS*TALPAH
Trigger: ATGTGCTGGCAATGCAGTTCAACTGGGACGGCTACT...AACAGAGTCCAAGCAGAGAAGGTAGGAACCCTCCATAGCTCTCTGCCCTGATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS-3UTR TCA 90 bp TCAAAGGACTTCTTCCTAGTTCCCCCACACATCAGGGCAGAGAGCTATGGAGGGTGCTTTGAGATTTGGTaGTCCCTTCCAGTCCTCTCC +
Preference number: 4 (lower is better)
Translates to: SKDFFLVPPHIRAESYGGCFEIW*SLPVLS
Trigger: GGAGAGGACTGGAAGGGATCACCAAATCTCAAAGCA...CCCTCCATAGCTCTCTGCCCTGATGTGTGGGGGAACTAGGAAGAAGTCCTTTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS-3UTR TCA 90 bp GATAGCACTTCAGTCTCGCAAGAGCCCTCATGCCCCTTTCTGGCTCGAAGTTCTTGCTTTGAGATTTGGTaGTCCCTTCCAGTCCTCTCC +
Preference number: 4 (lower is better)
Translates to: DSTSVSQEPSCPFLARSSCFEIW*SLPVLS
Trigger: GGAGAGGACTGGAAGGGATCACCAAATCTCAAAGCA...AGAACTTCGAGCCAGAAAGGGGCATGAGGGCTCTTGCGAGACTGAAGTGCTATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS-3UTR TCA 90 bp GTCAAAGGACTTCTTCCTAGTTCCCCCACACATCAGGGCAGAGAGCTATGGAGGTGCTTTGAGATTTGGTaGTCCCTTCCAGTCCTCTCC +
Preference number: 4 (lower is better)
Translates to: VKGLLPSSPTHQGRELWRCFEIW*SLPVLS
Trigger: GGAGAGGACTGGAAGGGATCACCAAATCTCAAAGCA...CCTCCATAGCTCTCTGCCCTGATGTGTGGGGGAACTAGGAAGAAGTCCTTTGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS-3UTR TCA 90 bp ACATCAGGGCAGAGAGCTATGGAGGGTTCCTACCTTCTCTGCTTGGACTCTGTTACCCCAACACAGGGCTaGGTGGTAGTTTACAGAGCT +
Preference number: 4 (lower is better)
Translates to: TSGQRAMEGSYLLCLDSVTPTQG*VVVYRA
Trigger: AGCTCTGTAAACTACCACTCAGCCCTGTGTTGGGGT...AACAGAGTCCAAGCAGAGAAGGTAGGAACCCTCCATAGCTCTCTGCCCTGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229003.7
ENST00000422538.8
CDS-3UTR GCA 90 bp AGGGCAGAGAGCTATGGAGGGTTCCTACCTTCTCTGCTTGGACTCTGTTTCTTATGCAGGCCCTCATGGTaGCCAGTTGGAGGCCAAAAA +
Preference number: 4 (lower is better)
Translates to: RAESYGGFLPSLLGLCFLCRPSW*PVGGQK
Trigger: TTTTTGGCCTCCAACTGGGCACCATGAGGGCCTGCA...TAAGAAACAGAGTCCAAGCAGAGAAGGTAGGAACCCTCCATAGCTCTCTGCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS-3UTR GCA 90 bp GGTGAGGTCAAAGGACTTCTTCCTAGTTCCCCCACACATCAGGGCAGAGAGCTATTGTTATGGCATCACTaGTGTGGGAGACCTCGTGGT +
Preference number: 4 (lower is better)
Translates to: GEVKGLLPSSPTHQGRELLLWHH*CGRPRG
Trigger: ACCACGAGGTCTCCCACAGCAGTGATGCCATAACAA...TAGCTCTCTGCCCTGATGTGTGGGGGAACTAGGAAGAAGTCCTTTGACCTCACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS-3UTR GCA 90 bp AAGGGAAGCATGAGGCCTGGTGAGGTCAAAGGACTTCTTCCTAGTTCCCCCACATTGTTATGGCATCACTaGTGTGGGAGACCTCGTGGT +
Preference number: 4 (lower is better)
Translates to: KGSMRPGEVKGLLPSSPTLLWHH*CGRPRG
Trigger: ACCACGAGGTCTCCCACAGCAGTGATGCCATAACAA...TGTGGGGGAACTAGGAAGAAGTCCTTTGACCTCACCAGGCCTCATGCTTCCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS-3UTR GCA 90 bp TATCTCTTTCCCATGTGGGCACTTTGGGATTTAGGAATGCTTCTCATTGCTTTGCTGAGGAAGGCGTCCTaGTCGGCCAGCTCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: YLFPMWALWDLGMLLIALLRKAS*SASSWA
Trigger: TGCCCAGGAGCTGGCCGAGCAGGACGCCTTCCTCAG...CAAAGCAATGAGAAGCATTCCTAAATCCCAAAGTGCCCACATGGGAAAGAGATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS-3UTR GCA 90 bp GATAGCACTTCAGTCTCGCAAGAGCCCTCATGCCCCTTTCTGGCTCGAAGTTCTCCAGTTGAACTGCATTaGCAGCACATCGGGGTAAGA +
Preference number: 4 (lower is better)
Translates to: DSTSVSQEPSCPFLARSSPVELH*QHIGVR
Trigger: TCTTACCCCGATGTGCTGGCAATGCAGTTCAACTGG...AGAACTTCGAGCCAGAAAGGGGCATGAGGGCTCTTGCGAGACTGAAGTGCTATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS-3UTR GCA 90 bp CCTGGTGAGGTCAAAGGACTTCTTCCTAGTTCCCCCACACATCAGGGCAGAGAGTGGCGATGTACTTCTTaGCATTCCCATAGGTGGACT +
Preference number: 4 (lower is better)
Translates to: PGEVKGLLPSSPTHQGREWRCTS*HSHRWT
Trigger: AGTCCACCTATGGGAATGGCAAGAAGTACATCGCCA...CTCTCTGCCCTGATGTGTGGGGGAACTAGGAAGAAGTCCTTTGACCTCACCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS-3UTR CCA 90 bp GGTGAGGTCAAAGGACTTCTTCCTAGTTCCCCCACACATCAGGGCAGAGAGCTACAGGACTTGTGGAGCTaGTGTCTCCAGATCCTTTCA +
Preference number: 4 (lower is better)
Translates to: GEVKGLLPSSPTHQGRELQDLWS*CLQILS
Trigger: TGAAAGGATCTGGAGACACCAGCTCCACAAGTCCTG...TAGCTCTCTGCCCTGATGTGTGGGGGAACTAGGAAGAAGTCCTTTGACCTCACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000229003.7
CDS-3UTR CCA 90 bp TCCCATGTGGGCACTTTGGGATTTAGGAATGCTTCTCATTGCTTTGAGATTTGGGGCCCTGGCAGGAGGTaGGTGCCGAGTACAAGTTGC +
Preference number: 4 (lower is better)
Translates to: SHVGTLGFRNASHCFEIWGPGRR*VPSTSC
Trigger: GCAACTTGTACTCGGCACCCACCTCCTGCCAGGGCC...CCAAATCTCAAAGCAATGAGAAGCATTCCTAAATCCCAAAGTGCCCACATGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229003.7
ENST00000422538.8
CDS-3UTR CCA 90 bp ACCCGGCTCTGTGGTACAGCATTTAGTTCTCAGTGGGGTTGGGGGACAAATGCACCTTCTGGGCTTTGTTaGTGTCTGCCCTGTAGATCT +
Preference number: 4 (lower is better)
Translates to: TRLCGTAFSSQWGWGTNAPSGLC*CLPCRS
Trigger: AGATCTACAGGGCAGACACCAACAAAGCCCAGAAGG...TGCATTTGTCCCCCAACCCCACTGAGAACTAAATGCTGTACCACAGAGCCGGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000229003.7
ENST00000422538.8
CDS-3UTR CCA 90 bp GTCAAAGGACTTCTTCCTAGTTCCCCCACACATCAGGGCAGAGAGCTATGGAGGAGTGAAGAGTGGCTTTaGGCAGCGATCCACTTGGTT +
Preference number: 4 (lower is better)
Translates to: VKGLLPSSPTHQGRELWRSEEWL*AAIHLV
Trigger: AACCAAGTGGATCGCTGCCCAAAGCCACTCTTCACT...CCTCCATAGCTCTCTGCCCTGATGTGTGGGGGAACTAGGAAGAAGTCCTTTGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS-3UTR CCA 90 bp AAGGGAAGCATGAGGCCTGGTGAGGTCAAAGGACTTCTTCCTAGTTCCCCCACAAGTGAAGAGTGGCTTTaGGCAGCGATCCACTTGGTT +
Preference number: 4 (lower is better)
Translates to: KGSMRPGEVKGLLPSSPTSEEWL*AAIHLV
Trigger: AACCAAGTGGATCGCTGCCCAAAGCCACTCTTCACT...TGTGGGGGAACTAGGAAGAAGTCCTTTGACCTCACCAGGCCTCATGCTTCCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS-3UTR CCA 90 bp TTCACACCCGGCTCTGTGGTACAGCATTTAGTTCTCAGTGGGGTTGGGGGACAAGACATAAGTGAAGAGTaGCTTTGGGCAGCGATCCAC +
Preference number: 4 (lower is better)
Translates to: FTPGSVVQHLVLSGVGGQDISEE*LWAAIH
Trigger: GTGGATCGCTGCCCAAAGCCACTCTTCACTTATGTC...TTGTCCCCCAACCCCACTGAGAACTAAATGCTGTACCACAGAGCCGGGTGTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000229003.7
ENST00000422538.8
CDS-3UTR CCA 90 bp AGGCCTGGTGAGGTCAAAGGACTTCTTCCTAGTTCCCCCACACATCAGGGCAGATGCCATTCCCATAGGTaGACTTGTCCCAGGTATATG +
Preference number: 4 (lower is better)
Translates to: RPGEVKGLLPSSPTHQGRCHSHR*TCPRYM
Trigger: CATATACCTGGGACAAGTCCACCTATGGGAATGGCA...TCTGCCCTGATGTGTGGGGGAACTAGGAAGAAGTCCTTTGACCTCACCAGGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS-3UTR TCA 90 bp AGGCCTGGTGAGGTCAAAGGACTTCTTCCTAGTTCCCCCACACATCAGGGCAGATTCACTAGAGTCAGATaGATGTCACAGCTCTCAGAC +
Preference number: 4 (lower is better)
Translates to: RPGEVKGLLPSSPTHQGRFTRVR*MSQLSD
Trigger: GTCTGAGAGCTGTGACATTCATCTGACTCTAGTGAA...TCTGCCCTGATGTGTGGGGGAACTAGGAAGAAGTCCTTTGACCTCACCAGGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS-3UTR TCA 90 bp GTGGGAAACTTCTTGTTGCAGATACTGAGCTGGACACAAAAACACTCAGGCCTGCAGCGGGCATTGCAGTaGCATTGGTGGTGCTTGTCA +
Preference number: 4 (lower is better)
Translates to: VGNFLLQILSWTQKHSGLQRALQ*HWWCLS
Trigger: TGACAAGCACCACCAATGTCACTGCAATGCCCGCTG...CAGGCCTGAGTGTTTTTGTGTCCAGCTCAGTATCTGCAACAAGAAGTTTCCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229003.7
ENST00000422538.8
CDS-3UTR TCA 90 bp ACATCAGGGCAGAGAGCTATGGAGGGTTCCTACCTTCTCTGCTTGGACTCTGTTGACAAACTCTTGCTCTaGGCCATAGCGATTCTGGTG +
Preference number: 4 (lower is better)
Translates to: TSGQRAMEGSYLLCLDSVDKLLL*AIAILV
Trigger: CACCAGAATCGCTATGGCTCAGAGCAAGAGTTTGTC...AACAGAGTCCAAGCAGAGAAGGTAGGAACCCTCCATAGCTCTCTGCCCTGATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS-3UTR TCA 90 bp GTGAGGTCAAAGGACTTCTTCCTAGTTCCCCCACACATCAGGGCAGAGAGCTATGACAAACTCTTGCTCTaGGCCATAGCGATTCTGGTG +
Preference number: 4 (lower is better)
Translates to: VRSKDFFLVPPHIRAESYDKLLL*AIAILV
Trigger: CACCAGAATCGCTATGGCTCAGAGCAAGAGTTTGTC...ATAGCTCTCTGCCCTGATGTGTGGGGGAACTAGGAAGAAGTCCTTTGACCTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS-3UTR TCA 90 bp TGGGCACTTTGGGATTTAGGAATGCTTCTCATTGCTTTGAGATTTGGTGATCCCTGCCTGGCCTGGCGATaGAGCACAGGGAGTAGAGTG +
Preference number: 4 (lower is better)
Translates to: WALWDLGMLLIALRFGDPCLAWR*STGSRV
Trigger: CACTCTACTCCCTGTGCTTCATCGCCAGGCCAGGCA...GGGATCACCAAATCTCAAAGCAATGAGAAGCATTCCTAAATCCCAAAGTGCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS-3UTR TCA 90 bp TCAAAGGACTTCTTCCTAGTTCCCCCACACATCAGGGCAGAGAGCTATGGAGGGTCCCAGACTCTGTTCTaGGAGGATCTAACTCTGGAA +
Preference number: 4 (lower is better)
Translates to: SKDFFLVPPHIRAESYGGSQTLF*EDLTLE
Trigger: TTCCAGAGTTAGATCCTCTCAGAACAGAGTCTGGGA...CCCTCCATAGCTCTCTGCCCTGATGTGTGGGGGAACTAGGAAGAAGTCCTTTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229003.7
ENST00000422538.8
CDS-3UTR GCA 90 bp TCAAAGGACTTCTTCCTAGTTCCCCCACACATCAGGGCAGAGAGCTATGGAGGGGGCTTTGTTGGTGTCTaGCCTGTAGATCTTCTCAGA +
Preference number: 4 (lower is better)
Translates to: SKDFFLVPPHIRAESYGGGFVGV*PVDLLR
Trigger: TCTGAGAAGATCTACAGGGCAGACACCAACAAAGCC...CCCTCCATAGCTCTCTGCCCTGATGTGTGGGGGAACTAGGAAGAAGTCCTTTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS-3UTR GCA 90 bp AAGGGAAGCATGAGGCCTGGTGAGGTCAAAGGACTTCTTCCTAGTTCCCCCACAGGCTTTGTTGGTGTCTaGCCTGTAGATCTTCTCAGA +
Preference number: 4 (lower is better)
Translates to: KGSMRPGEVKGLLPSSPTGFVGV*PVDLLR
Trigger: TCTGAGAAGATCTACAGGGCAGACACCAACAAAGCC...TGTGGGGGAACTAGGAAGAAGTCCTTTGACCTCACCAGGCCTCATGCTTCCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS-3UTR GCA 90 bp GATAGCACTTCAGTCTCGCAAGAGCCCTCATGCCCCTTTCTGGCTCGAAGTTCTAGTCCCCCTCTTCATTaGCTCTTGAATAGAGCCCAA +
Preference number: 4 (lower is better)
Translates to: DSTSVSQEPSCPFLARSSSPPLH*LLNRAQ
Trigger: TTGGGCTCTATTCAAGAGGCAATGAAGAGGGGGACT...AGAACTTCGAGCCAGAAAGGGGCATGAGGGCTCTTGCGAGACTGAAGTGCTATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS-3UTR GCA 90 bp CTTCTCTCTAGTCCAGAGAAGATAGCACTTCAGTCTCGCAAGAGCCCTCATGCCCCAGTTGAACTGCATTaGCAGCACATCGGGGTAAGA +
Preference number: 4 (lower is better)
Translates to: LLSSPEKIALQSRKSPHAPVELH*QHIGVR
Trigger: TCTTACCCCGATGTGCTGGCAATGCAGTTCAACTGG...GGCATGAGGGCTCTTGCGAGACTGAAGTGCTATCTTCTCTGGACTAGAGAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS-3UTR GCA 90 bp AAGGGAAGCATGAGGCCTGGTGAGGTCAAAGGACTTCTTCCTAGTTCCCCCACATGGCGATGTACTTCTTaGCATTCCCATAGGTGGACT +
Preference number: 4 (lower is better)
Translates to: KGSMRPGEVKGLLPSSPTWRCTS*HSHRWT
Trigger: AGTCCACCTATGGGAATGGCAAGAAGTACATCGCCA...TGTGGGGGAACTAGGAAGAAGTCCTTTGACCTCACCAGGCCTCATGCTTCCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS-3UTR GCA 90 bp GATAGCACTTCAGTCTCGCAAGAGCCCTCATGCCCCTTTCTGGCTCGAAGTTCTTGGCGATGTACTTCTTaGCATTCCCATAGGTGGACT +
Preference number: 4 (lower is better)
Translates to: DSTSVSQEPSCPFLARSSWRCTS*HSHRWT
Trigger: AGTCCACCTATGGGAATGGCAAGAAGTACATCGCCA...AGAACTTCGAGCCAGAAAGGGGCATGAGGGCTCTTGCGAGACTGAAGTGCTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS-3UTR CCA 90 bp AGCCCATTCACTGCACCAACCTATTACCCTTCTCCATTCAGCATTGGAGTTCTCCTCATGGTGCCCAGTTaGAGGCCAAAAAGGGAGTGG +
Preference number: 4 (lower is better)
Translates to: SPFTAPTYYPSPFSIGVLLMVPS*RPKREW
Trigger: CCACTCCCTTTTTGGCCTCCAACTGGGCACCATGAG...GAGAACTCCAATGCTGAATGGAGAAGGGTAATAGGTTGGTGCAGTGAATGGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229003.7
ENST00000422538.8
CDS-3UTR CCA 90 bp GTGGGAAACTTCTTGTTGCAGATACTGAGCTGGACACAAAAACACTCAGGCCTGCTGTGGGAGACCTCGTaGTCACTACACAGGCTCTCA +
Preference number: 4 (lower is better)
Translates to: VGNFLLQILSWTQKHSGLLWETS*SLHRLS
Trigger: TGAGAGCCTGTGTAGTGACCACGAGGTCTCCCACAG...CAGGCCTGAGTGTTTTTGTGTCCAGCTCAGTATCTGCAACAAGAAGTTTCCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229003.7
ENST00000422538.8
CDS-3UTR CCA 90 bp CCTGGTGAGGTCAAAGGACTTCTTCCTAGTTCCCCCACACATCAGGGCAGAGAGGGGGAGATGCAGTTTTaGCTATTGAGAACGATGTCT +
Preference number: 4 (lower is better)
Translates to: PGEVKGLLPSSPTHQGREGEMQF*LLRTMS
Trigger: AGACATCGTTCTCAATAGCCAAAACTGCATCTCCCC...CTCTCTGCCCTGATGTGTGGGGGAACTAGGAAGAAGTCCTTTGACCTCACCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS-3UTR CCA 90 bp AAGGGAAGCATGAGGCCTGGTGAGGTCAAAGGACTTCTTCCTAGTTCCCCCACAAAGCGGATCCAGTTATaGAAGCCAGTAACCTTGCCT +
Preference number: 4 (lower is better)
Translates to: KGSMRPGEVKGLLPSSPTKRIQL*KPVTLP
Trigger: AGGCAAGGTTACTGGCTTCCATAACTGGATCCGCTT...TGTGGGGGAACTAGGAAGAAGTCCTTTGACCTCACCAGGCCTCATGCTTCCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS-3UTR CCA 90 bp TCAAAGGACTTCTTCCTAGTTCCCCCACACATCAGGGCAGAGAGCTATGGAGGGCCTCATGCCCCTTTCTaGCTCGAAGTTCTATTAGGT +
Preference number: 4 (lower is better)
Translates to: SKDFFLVPPHIRAESYGGPHAPF*LEVLLG
Trigger: ACCTAATAGAACTTCGAGCCAGAAAGGGGCATGAGG...CCCTCCATAGCTCTCTGCCCTGATGTGTGGGGGAACTAGGAAGAAGTCCTTTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS-3UTR CCA 90 bp ACACCCGGCTCTGTGGTACAGCATTTAGTTCTCAGTGGGGTTGGGGGACAAATGCCCATGTGGGCACTTTaGGATTTAGGAATGCTTCTC +
Preference number: 4 (lower is better)
Translates to: TPGSVVQHLVLSGVGGQMPMWAL*DLGMLL
Trigger: GAGAAGCATTCCTAAATCCCAAAGTGCCCACATGGG...CATTTGTCCCCCAACCCCACTGAGAACTAAATGCTGTACCACAGAGCCGGGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000229003.7
ENST00000422538.8
CDS-3UTR CCA 90 bp ACACCCGGCTCTGTGGTACAGCATTTAGTTCTCAGTGGGGTTGGGGGACAAATGGCATTTAGTTCTCAGTaGGGTTGGGGGACAAATGCA +
Preference number: 4 (lower is better)
Translates to: TPGSVVQHLVLSGVGGQMAFSSQ*GWGTNA
Trigger: TGCATTTGTCCCCCAACCCCACTGAGAACTAAATGC...CATTTGTCCCCCAACCCCACTGAGAACTAAATGCTGTACCACAGAGCCGGGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000229003.7
ENST00000422538.8
CDS-3UTR TCA 90 bp GGTGAGGTCAAAGGACTTCTTCCTAGTTCCCCCACACATCAGGGCAGAGAGCTATTCACTAGAGTCAGATaGATGTCACAGCTCTCAGAC +
Preference number: 4 (lower is better)
Translates to: GEVKGLLPSSPTHQGRELFTRVR*MSQLSD
Trigger: GTCTGAGAGCTGTGACATTCATCTGACTCTAGTGAA...TAGCTCTCTGCCCTGATGTGTGGGGGAACTAGGAAGAAGTCCTTTGACCTCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS-3UTR TCA 90 bp AAGGGAAGCATGAGGCCTGGTGAGGTCAAAGGACTTCTTCCTAGTTCCCCCACACTCTTCATTGCCTCTTaGATAGAGCCCAAACCACAT +
Preference number: 4 (lower is better)
Translates to: KGSMRPGEVKGLLPSSPTLFIAS*IEPKPH
Trigger: ATGTGGTTTGGGCTCTATTCAAGAGGCAATGAAGAG...TGTGGGGGAACTAGGAAGAAGTCCTTTGACCTCACCAGGCCTCATGCTTCCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS-3UTR TCA 90 bp AGCCCATTCACTGCACCAACCTATTACCCTTCTCCATTCAGCATTGGAGTTCTCAGTAGCCGTCCCAGTTaGACTGCATTGCCAGCACAT +
Preference number: 4 (lower is better)
Translates to: SPFTAPTYYPSPFSIGVLSSRPS*TALPAH
Trigger: ATGTGCTGGCAATGCAGTTCAACTGGGACGGCTACT...GAGAACTCCAATGCTGAATGGAGAAGGGTAATAGGTTGGTGCAGTGAATGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229003.7
ENST00000422538.8
CDS-3UTR TCA 90 bp ACATCAGGGCAGAGAGCTATGGAGGGTTCCTACCTTCTCTGCTTGGACTCTGTTTCCCAGACTCTGTTCTaGGAGGATCTAACTCTGGAA +
Preference number: 4 (lower is better)
Translates to: TSGQRAMEGSYLLCLDSVSQTLF*EDLTLE
Trigger: TTCCAGAGTTAGATCCTCTCAGAACAGAGTCTGGGA...AACAGAGTCCAAGCAGAGAAGGTAGGAACCCTCCATAGCTCTCTGCCCTGATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229003.7
ENST00000422538.8
CDS-3UTR GCA 90 bp GTGAGGTCAAAGGACTTCTTCCTAGTTCCCCCACACATCAGGGCAGAGAGCTATGGCTTTGTTGGTGTCTaGCCTGTAGATCTTCTCAGA +
Preference number: 4 (lower is better)
Translates to: VRSKDFFLVPPHIRAESYGFVGV*PVDLLR
Trigger: TCTGAGAAGATCTACAGGGCAGACACCAACAAAGCC...ATAGCTCTCTGCCCTGATGTGTGGGGGAACTAGGAAGAAGTCCTTTGACCTCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS-3UTR GCA 90 bp ACATCAGGGCAGAGAGCTATGGAGGGTTCCTACCTTCTCTGCTTGGACTCTGTTAGTCCCCCTCTTCATTaGCTCTTGAATAGAGCCCAA +
Preference number: 4 (lower is better)
Translates to: TSGQRAMEGSYLLCLDSVSPPLH*LLNRAQ
Trigger: TTGGGCTCTATTCAAGAGGCAATGAAGAGGGGGACT...AACAGAGTCCAAGCAGAGAAGGTAGGAACCCTCCATAGCTCTCTGCCCTGATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS-3UTR CCA 90 bp TCAAAGGACTTCTTCCTAGTTCCCCCACACATCAGGGCAGAGAGCTATGGAGGGTCTCCTCTTTTGTTATaGCATCACTGCTGTGGGAGA +
Preference number: 4 (lower is better)
Translates to: SKDFFLVPPHIRAESYGGSPLLL*HHCCGR
Trigger: TCTCCCACAGCAGTGATGCCATAACAAAAGAGGAGA...CCCTCCATAGCTCTCTGCCCTGATGTGTGGGGGAACTAGGAAGAAGTCCTTTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS-3UTR CCA 90 bp AGGGCAGAGAGCTATGGAGGGTTCCTACCTTCTCTGCTTGGACTCTGTTTCTTACCTTCTGGGCTTTGTTaGTGTCTGCCCTGTAGATCT +
Preference number: 4 (lower is better)
Translates to: RAESYGGFLPSLLGLCFLPSGLC*CLPCRS
Trigger: AGATCTACAGGGCAGACACCAACAAAGCCCAGAAGG...TAAGAAACAGAGTCCAAGCAGAGAAGGTAGGAACCCTCCATAGCTCTCTGCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS-3UTR CCA 90 bp GTGGGCAAACCCCTTCCCTTTACATTAAAGGGAAGCATGAGGCCTGGTGAGGTCGGGGAGATGCAGTTTTaGCTATTGAGAACGATGTCT +
Preference number: 4 (lower is better)
Translates to: VGKPLPFTLKGSMRPGEVGEMQF*LLRTMS
Trigger: AGACATCGTTCTCAATAGCCAAAACTGCATCTCCCC...GACCTCACCAGGCCTCATGCTTCCCTTTAATGTAAAGGGAAGGGGTTTGCCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000229003.7
ENST00000422538.8
CDS-3UTR CCA 90 bp TGGGCACTTTGGGATTTAGGAATGCTTCTCATTGCTTTGAGATTTGGTGATCCCCTGGCACACTTTGCCTaGCCTGGCGATGAAGCACAG +
Preference number: 4 (lower is better)
Translates to: WALWDLGMLLIALRFGDPLAHFA*PGDEAQ
Trigger: CTGTGCTTCATCGCCAGGCCAGGCAAAGTGTGCCAG...GGGATCACCAAATCTCAAAGCAATGAGAAGCATTCCTAAATCCCAAAGTGCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS-3UTR CCA 90 bp CCTGGTGAGGTCAAAGGACTTCTTCCTAGTTCCCCCACACATCAGGGCAGAGAGCGAAGTTCTATTAGGTaGAAGACACTATGTAGGCTG +
Preference number: 4 (lower is better)
Translates to: PGEVKGLLPSSPTHQGRERSSIR*KTLCRL
Trigger: CAGCCTACATAGTGTCTTCCACCTAATAGAACTTCG...CTCTCTGCCCTGATGTGTGGGGGAACTAGGAAGAAGTCCTTTGACCTCACCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS-3UTR CCA 90 bp AGCCCATTCACTGCACCAACCTATTACCCTTCTCCATTCAGCATTGGAGTTCTCCAGGGCAGAGAGCTATaGAGGGTTCCTACCTTCTCT +
Preference number: 4 (lower is better)
Translates to: SPFTAPTYYPSPFSIGVLQGREL*RVPTFS
Trigger: AGAGAAGGTAGGAACCCTCCATAGCTCTCTGCCCTG...GAGAACTCCAATGCTGAATGGAGAAGGGTAATAGGTTGGTGCAGTGAATGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229003.7
ENST00000422538.8
CDS-3UTR CCA 90 bp GTCAAAGGACTTCTTCCTAGTTCCCCCACACATCAGGGCAGAGAGCTATGGAGGTTCTCCATTCAGCATTaGAGTTCTCCCAGACTCTGT +
Preference number: 4 (lower is better)
Translates to: VKGLLPSSPTHQGRELWRFSIQH*SSPRLC
Trigger: ACAGAGTCTGGGAGAACTCCAATGCTGAATGGAGAA...CCTCCATAGCTCTCTGCCCTGATGTGTGGGGGAACTAGGAAGAAGTCCTTTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229003.7
ENST00000422538.8
CDS-3UTR CCA 90 bp GTCAAAGGACTTCTTCCTAGTTCCCCCACACATCAGGGCAGAGAGCTATGGAGGTTGCAGATACTGAGCTaGACACAAAAACACTCAGGC +
Preference number: 4 (lower is better)
Translates to: VKGLLPSSPTHQGRELWRLQILS*TQKHSG
Trigger: GCCTGAGTGTTTTTGTGTCCAGCTCAGTATCTGCAA...CCTCCATAGCTCTCTGCCCTGATGTGTGGGGGAACTAGGAAGAAGTCCTTTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000229003.7
ENST00000422538.8
CDS-3UTR CCA 90 bp GTGAGGTCAAAGGACTTCTTCCTAGTTCCCCCACACATCAGGGCAGAGAGCTATGCATTTAGTTCTCAGTaGGGTTGGGGGACAAATGCA +
Preference number: 4 (lower is better)
Translates to: VRSKDFFLVPPHIRAESYAFSSQ*GWGTNA
Trigger: TGCATTTGTCCCCCAACCCCACTGAGAACTAAATGC...ATAGCTCTCTGCCCTGATGTGTGGGGGAACTAGGAAGAAGTCCTTTGACCTCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000229003.7
ENST00000422538.8
CDS-3UTR CCA 90 bp CTTCTCTCTAGTCCAGAGAAGATAGCACTTCAGTCTCGCAAGAGCCCTCATGCCGGCTCTGACTCTTTGTaGTCCTCAGTACACAGATGT +
Preference number: 4 (lower is better)
Translates to: LLSSPEKIALQSRKSPHAGSDSL*SSVHRC
Trigger: ACATCTGTGTACTGAGGACCACAAAGAGTCAGAGCC...GGCATGAGGGCTCTTGCGAGACTGAAGTGCTATCTTCTCTGGACTAGAGAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422538.8
CDS-3UTR TCA 90 bp GGTGAGGTCAAAGGACTTCTTCCTAGTTCCCCCACACATCAGGGCAGAGAGCTATGCAGTTTTGGCTATTaGGAACGATGTCTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: GEVKGLLPSSPTHQGRELCSFGY*ERCLPS
Trigger: AGAAGGAAGACATCGTTCTCAATAGCCAAAACTGCA...TAGCTCTCTGCCCTGATGTGTGGGGGAACTAGGAAGAAGTCCTTTGACCTCACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS-3UTR TCA 90 bp TTCACACCCGGCTCTGTGGTACAGCATTTAGTTCTCAGTGGGGTTGGGGGACAATGCAGTTTTGGCTATTaGGAACGATGTCTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: FTPGSVVQHLVLSGVGGQCSFGY*ERCLPS
Trigger: AGAAGGAAGACATCGTTCTCAATAGCCAAAACTGCA...TTGTCCCCCAACCCCACTGAGAACTAAATGCTGTACCACAGAGCCGGGTGTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000229003.7
ENST00000422538.8
CDS-3UTR TCA 90 bp CACATCAGGGCAGAGAGCTATGGAGGGTTCCTACCTTCTCTGCTTGGACTCTGTTGCAGTTTTGGCTATTaGGAACGATGTCTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: HIRAESYGGFLPSLLGLCCSFGY*ERCLPS
Trigger: AGAAGGAAGACATCGTTCTCAATAGCCAAAACTGCA...ACAGAGTCCAAGCAGAGAAGGTAGGAACCCTCCATAGCTCTCTGCCCTGATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS-3UTR TCA 90 bp CCCAAAAAGAGGAAAGTGGGCAAACCCCTTCCCTTTACATTAAAGGGAAGCATGAAGCATGAGGCCTGGTaGGGTCAAAGGACTTCTTCC +
Preference number: 4 (lower is better)
Translates to: PKKRKVGKPLPFTLKGSMKHEAW*GQRTSS
Trigger: GGAAGAAGTCCTTTGACCTCACCAGGCCTCATGCTT...CATGCTTCCCTTTAATGTAAAGGGAAGGGGTTTGCCCACTTTCCTCTTTTTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000229003.7
ENST00000422538.8
CDS-3UTR TCA 90 bp ACACCCGGCTCTGTGGTACAGCATTTAGTTCTCAGTGGGGTTGGGGGACAAATGTCTTGTTGCAGATACTaGGCTGGACACAAAAACACT +
Preference number: 4 (lower is better)
Translates to: TPGSVVQHLVLSGVGGQMSCCRY*AGHKNT
Trigger: AGTGTTTTTGTGTCCAGCTCAGTATCTGCAACAAGA...CATTTGTCCCCCAACCCCACTGAGAACTAAATGCTGTACCACAGAGCCGGGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000229003.7
ENST00000422538.8
CDS-3UTR GCA 90 bp CCTGGTGAGGTCAAAGGACTTCTTCCTAGTTCCCCCACACATCAGGGCAGAGAGAGATCTTCTCAGAGATaGTCTGAATCTCCTCTTTTG +
Preference number: 4 (lower is better)
Translates to: PGEVKGLLPSSPTHQGRERSSQR*SESPLL
Trigger: CAAAAGAGGAGATTCAGAGCATCTCTGAGAAGATCT...CTCTCTGCCCTGATGTGTGGGGGAACTAGGAAGAAGTCCTTTGACCTCACCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS-3UTR GCA 90 bp GGAAACTTCTTGTTGCAGATACTGAGCTGGACACAAAAACACTCAGGCCTGGAGCCAGTTGAACTGCATTaGCAGCACATCGGGGTAAGA +
Preference number: 4 (lower is better)
Translates to: GNFLLQILSWTQKHSGLEPVELH*QHIGVR
Trigger: TCTTACCCCGATGTGCTGGCAATGCAGTTCAACTGG...CTCCAGGCCTGAGTGTTTTTGTGTCCAGCTCAGTATCTGCAACAAGAAGTTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000229003.7
ENST00000422538.8
CDS-3UTR GCA 90 bp GTCAAAGGACTTCTTCCTAGTTCCCCCACACATCAGGGCAGAGAGCTATGGAGGAAAAATATCAGGGTTTaGCCTCTCACCAACCCCAAA +
Preference number: 4 (lower is better)
Translates to: VKGLLPSSPTHQGRELWRKNIRV*PLTNPK
Trigger: TTTGGGGTTGGTGAGAGGGCAAACCCTGATATTTTT...CCTCCATAGCTCTCTGCCCTGATGTGTGGGGGAACTAGGAAGAAGTCCTTTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000229003.7
ENST00000422538.8
CDS-3UTR GCA 90 bp GATAGCACTTCAGTCTCGCAAGAGCCCTCATGCCCCTTTCTGGCTCGAAGTTCTAAAAATATCAGGGTTTaGCCTCTCACCAACCCCAAA +
Preference number: 4 (lower is better)
Translates to: DSTSVSQEPSCPFLARSSKNIRV*PLTNPK
Trigger: TTTGGGGTTGGTGAGAGGGCAAACCCTGATATTTTT...AGAACTTCGAGCCAGAAAGGGGCATGAGGGCTCTTGCGAGACTGAAGTGCTATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000229003.7
ENST00000422538.8
CDS-3UTR GCA 90 bp GATAGCACTTCAGTCTCGCAAGAGCCCTCATGCCCCTTTCTGGCTCGAAGTTCTAAAACCAAAGGCCCTTaGTTGATTACTGTGGCCTTA +
Preference number: 4 (lower is better)
Translates to: DSTSVSQEPSCPFLARSSKTKGP*LITVAL
Trigger: TAAGGCCACAGTAATCAAGCAAGGGCCTTTGGTTTT...AGAACTTCGAGCCAGAAAGGGGCATGAGGGCTCTTGCGAGACTGAAGTGCTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229003.7
ENST00000422538.8
CDS-3UTR CCA 90 bp TCCCATGTGGGCACTTTGGGATTTAGGAATGCTTCTCATTGCTTTGAGATTTGGCTCATGGTGCCCAGTTaGAGGCCAAAAAGGGAGTGG +
Preference number: 4 (lower is better)
Translates to: SHVGTLGFRNASHCFEIWLMVPS*RPKREW
Trigger: CCACTCCCTTTTTGGCCTCCAACTGGGCACCATGAG...CCAAATCTCAAAGCAATGAGAAGCATTCCTAAATCCCAAAGTGCCCACATGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS-3UTR CCA 90 bp ATACAAGTCTGTGGCTGCACTAAACATCCACAAGTGGGAAACTTCTTGTTGCAGCTGTGGGAGACCTCGTaGTCACTACACAGGCTCTCA +
Preference number: 4 (lower is better)
Translates to: IQVCGCTKHPQVGNFLLQLWETS*SLHRLS
Trigger: TGAGAGCCTGTGTAGTGACCACGAGGTCTCCCACAG...CTGCAACAAGAAGTTTCCCACTTGTGGATGTTTAGTGCAGCCACAGACTTGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229003.7
ENST00000422538.8
CDS-3UTR CCA 90 bp TGGGCACTTTGGGATTTAGGAATGCTTCTCATTGCTTTGAGATTTGGTGATCCCCTGTGGGAGACCTCGTaGTCACTACACAGGCTCTCA +
Preference number: 4 (lower is better)
Translates to: WALWDLGMLLIALRFGDPLWETS*SLHRLS
Trigger: TGAGAGCCTGTGTAGTGACCACGAGGTCTCCCACAG...GGGATCACCAAATCTCAAAGCAATGAGAAGCATTCCTAAATCCCAAAGTGCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS-3UTR CCA 90 bp AGGGCAGAGAGCTATGGAGGGTTCCTACCTTCTCTGCTTGGACTCTGTTTCTTAAAGCGGATCCAGTTATaGAAGCCAGTAACCTTGCCT +
Preference number: 4 (lower is better)
Translates to: RAESYGGFLPSLLGLCFLKRIQL*KPVTLP
Trigger: AGGCAAGGTTACTGGCTTCCATAACTGGATCCGCTT...TAAGAAACAGAGTCCAAGCAGAGAAGGTAGGAACCCTCCATAGCTCTCTGCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS-3UTR CCA 90 bp GTCAAAGGACTTCTTCCTAGTTCCCCCACACATCAGGGCAGAGAGCTATGGAGGCGAAGTTCTATTAGGTaGAAGACACTATGTAGGCTG +
Preference number: 4 (lower is better)
Translates to: VKGLLPSSPTHQGRELWRRSSIR*KTLCRL
Trigger: CAGCCTACATAGTGTCTTCCACCTAATAGAACTTCG...CCTCCATAGCTCTCTGCCCTGATGTGTGGGGGAACTAGGAAGAAGTCCTTTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS-3UTR CCA 90 bp AAGGGAAGCATGAGGCCTGGTGAGGTCAAAGGACTTCTTCCTAGTTCCCCCACATATCTCTTTCCCATGTaGGCACTTTGGGATTTAGGA +
Preference number: 4 (lower is better)
Translates to: KGSMRPGEVKGLLPSSPTYLFPM*ALWDLG
Trigger: TCCTAAATCCCAAAGTGCCCACATGGGAAAGAGATA...TGTGGGGGAACTAGGAAGAAGTCCTTTGACCTCACCAGGCCTCATGCTTCCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS-3UTR CCA 90 bp GGTGAGGTCAAAGGACTTCTTCCTAGTTCCCCCACACATCAGGGCAGAGAGCTATATCTCTTTCCCATGTaGGCACTTTGGGATTTAGGA +
Preference number: 4 (lower is better)
Translates to: GEVKGLLPSSPTHQGRELYLFPM*ALWDLG
Trigger: TCCTAAATCCCAAAGTGCCCACATGGGAAAGAGATA...TAGCTCTCTGCCCTGATGTGTGGGGGAACTAGGAAGAAGTCCTTTGACCTCACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS-3UTR CCA 90 bp GATAGCACTTCAGTCTCGCAAGAGCCCTCATGCCCCTTTCTGGCTCGAAGTTCTTATCTCTTTCCCATGTaGGCACTTTGGGATTTAGGA +
Preference number: 4 (lower is better)
Translates to: DSTSVSQEPSCPFLARSSYLFPM*ALWDLG
Trigger: TCCTAAATCCCAAAGTGCCCACATGGGAAAGAGATA...AGAACTTCGAGCCAGAAAGGGGCATGAGGGCTCTTGCGAGACTGAAGTGCTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS-3UTR CCA 90 bp ACATCAGGGCAGAGAGCTATGGAGGGTTCCTACCTTCTCTGCTTGGACTCTGTTTTCTCCATTCAGCATTaGAGTTCTCCCAGACTCTGT +
Preference number: 4 (lower is better)
Translates to: TSGQRAMEGSYLLCLDSVFSIQH*SSPRLC
Trigger: ACAGAGTCTGGGAGAACTCCAATGCTGAATGGAGAA...AACAGAGTCCAAGCAGAGAAGGTAGGAACCCTCCATAGCTCTCTGCCCTGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229003.7
ENST00000422538.8
CDS-3UTR TCA 90 bp TGGGCACTTTGGGATTTAGGAATGCTTCTCATTGCTTTGAGATTTGGTGATCCCAGTAGCCGTCCCAGTTaGACTGCATTGCCAGCACAT +
Preference number: 4 (lower is better)
Translates to: WALWDLGMLLIALRFGDPSSRPS*TALPAH
Trigger: ATGTGCTGGCAATGCAGTTCAACTGGGACGGCTACT...GGGATCACCAAATCTCAAAGCAATGAGAAGCATTCCTAAATCCCAAAGTGCCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS-3UTR TCA 90 bp ATACAAGTCTGTGGCTGCACTAAACATCCACAAGTGGGAAACTTCTTGTTGCAGAAGCATGAGGCCTGGTaGGGTCAAAGGACTTCTTCC +
Preference number: 4 (lower is better)
Translates to: IQVCGCTKHPQVGNFLLQKHEAW*GQRTSS
Trigger: GGAAGAAGTCCTTTGACCTCACCAGGCCTCATGCTT...CTGCAACAAGAAGTTTCCCACTTGTGGATGTTTAGTGCAGCCACAGACTTGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229003.7
ENST00000422538.8
CDS-3UTR TCA 90 bp TGGGCACTTTGGGATTTAGGAATGCTTCTCATTGCTTTGAGATTTGGTGATCCCAAGCATGAGGCCTGGTaGGGTCAAAGGACTTCTTCC +
Preference number: 4 (lower is better)
Translates to: WALWDLGMLLIALRFGDPKHEAW*GQRTSS
Trigger: GGAAGAAGTCCTTTGACCTCACCAGGCCTCATGCTT...GGGATCACCAAATCTCAAAGCAATGAGAAGCATTCCTAAATCCCAAAGTGCCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS-3UTR GCA 90 bp TATCTCTTTCCCATGTGGGCACTTTGGGATTTAGGAATGCTTCTCATTGCTTTGCTTGGCAGCGGGCATTaGAGTGACATTGGTGGTGCT +
Preference number: 4 (lower is better)
Translates to: YLFPMWALWDLGMLLIALLGSGH*SDIGGA
Trigger: AGCACCACCAATGTCACTGCAATGCCCGCTGCCAAG...CAAAGCAATGAGAAGCATTCCTAAATCCCAAAGTGCCCACATGGGAAAGAGATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS-3UTR GCA 90 bp CACATCAGGGCAGAGAGCTATGGAGGGTTCCTACCTTCTCTGCTTGGACTCTGTAGATCTTCTCAGAGATaGTCTGAATCTCCTCTTTTG +
Preference number: 4 (lower is better)
Translates to: HIRAESYGGFLPSLLGLCRSSQR*SESPLL
Trigger: CAAAAGAGGAGATTCAGAGCATCTCTGAGAAGATCT...ACAGAGTCCAAGCAGAGAAGGTAGGAACCCTCCATAGCTCTCTGCCCTGATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS-3UTR CCA 90 bp GGAAACTTCTTGTTGCAGATACTGAGCTGGACACAAAAACACTCAGGCCTGGAGAAGCGGATCCAGTTATaGAAGCCAGTAACCTTGCCT +
Preference number: 4 (lower is better)
Translates to: GNFLLQILSWTQKHSGLEKRIQL*KPVTLP
Trigger: AGGCAAGGTTACTGGCTTCCATAACTGGATCCGCTT...CTCCAGGCCTGAGTGTTTTTGTGTCCAGCTCAGTATCTGCAACAAGAAGTTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229003.7
ENST00000422538.8
CDS-3UTR CCA 90 bp AGCCCATTCACTGCACCAACCTATTACCCTTCTCCATTCAGCATTGGAGTTCTCTGCCATTCCCATAGGTaGACTTGTCCCAGGTATATG +
Preference number: 4 (lower is better)
Translates to: SPFTAPTYYPSPFSIGVLCHSHR*TCPRYM
Trigger: CATATACCTGGGACAAGTCCACCTATGGGAATGGCA...GAGAACTCCAATGCTGAATGGAGAAGGGTAATAGGTTGGTGCAGTGAATGGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229003.7
ENST00000422538.8
CDS-3UTR CCA 90 bp AGCCCATTCACTGCACCAACCTATTACCCTTCTCCATTCAGCATTGGAGTTCTCCCCATGTGGGCACTTTaGGATTTAGGAATGCTTCTC +
Preference number: 4 (lower is better)
Translates to: SPFTAPTYYPSPFSIGVLPMWAL*DLGMLL
Trigger: GAGAAGCATTCCTAAATCCCAAAGTGCCCACATGGG...GAGAACTCCAATGCTGAATGGAGAAGGGTAATAGGTTGGTGCAGTGAATGGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229003.7
ENST00000422538.8
CDS-3UTR CCA 90 bp TCAAAGGACTTCTTCCTAGTTCCCCCACACATCAGGGCAGAGAGCTATGGAGGGGAACTACAGTCTCTCTaGTCTCGTAGAGTTATTCAA +
Preference number: 4 (lower is better)
Translates to: SKDFFLVPPHIRAESYGGELQSL*SRRVIQ
Trigger: TTGAATAACTCTACGAGACCAGAGAGACTGTAGTTC...CCCTCCATAGCTCTCTGCCCTGATGTGTGGGGGAACTAGGAAGAAGTCCTTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000229003.7
ENST00000422538.8
CDS-3UTR TCA 90 bp TGGGCACTTTGGGATTTAGGAATGCTTCTCATTGCTTTGAGATTTGGTGATCCCTTGGTTTCTGGTCTCTaGCGGGGAGATGCAGTTTTG +
Preference number: 4 (lower is better)
Translates to: WALWDLGMLLIALRFGDPLVSGL*RGDAVL
Trigger: CAAAACTGCATCTCCCCGTCAGAGACCAGAAACCAA...GGGATCACCAAATCTCAAAGCAATGAGAAGCATTCCTAAATCCCAAAGTGCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS-3UTR TCA 90 bp ATACAAGTCTGTGGCTGCACTAAACATCCACAAGTGGGAAACTTCTTGTTGCAGCCAAAGGCCCTTGCTTaGTTACTGTGGCCTTACTTC +
Preference number: 4 (lower is better)
Translates to: IQVCGCTKHPQVGNFLLQPKALA*LLWPYF
Trigger: GAAGTAAGGCCACAGTAATCAAGCAAGGGCCTTTGG...CTGCAACAAGAAGTTTCCCACTTGTGGATGTTTAGTGCAGCCACAGACTTGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229003.7
ENST00000422538.8
CDS-3UTR GCA 90 bp CCCAAAAAGAGGAAAGTGGGCAAACCCCTTCCCTTTACATTAAAGGGAAGCATGAGTCCCCCTCTTCATTaGCTCTTGAATAGAGCCCAA +
Preference number: 4 (lower is better)
Translates to: PKKRKVGKPLPFTLKGSMSPPLH*LLNRAQ
Trigger: TTGGGCTCTATTCAAGAGGCAATGAAGAGGGGGACT...CATGCTTCCCTTTAATGTAAAGGGAAGGGGTTTGCCCACTTTCCTCTTTTTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000229003.7
ENST00000422538.8
CDS-3UTR GCA 90 bp AGGGCAGAGAGCTATGGAGGGTTCCTACCTTCTCTGCTTGGACTCTGTTTCTTAAAAACCAAAGGCCCTTaGTTGATTACTGTGGCCTTA +
Preference number: 4 (lower is better)
Translates to: RAESYGGFLPSLLGLCFLKTKGP*LITVAL
Trigger: TAAGGCCACAGTAATCAAGCAAGGGCCTTTGGTTTT...TAAGAAACAGAGTCCAAGCAGAGAAGGTAGGAACCCTCCATAGCTCTCTGCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229003.7
ENST00000422538.8
CDS-3UTR CCA 90 bp GTGGGAAACTTCTTGTTGCAGATACTGAGCTGGACACAAAAACACTCAGGCCTGTCTCCTCTTTTGTTATaGCATCACTGCTGTGGGAGA +
Preference number: 4 (lower is better)
Translates to: VGNFLLQILSWTQKHSGLSPLLL*HHCCGR
Trigger: TCTCCCACAGCAGTGATGCCATAACAAAAGAGGAGA...CAGGCCTGAGTGTTTTTGTGTCCAGCTCAGTATCTGCAACAAGAAGTTTCCCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000229003.7
ENST00000422538.8
CDS-3UTR CCA 90 bp TGGGCACTTTGGGATTTAGGAATGCTTCTCATTGCTTTGAGATTTGGTGATCCCCCTTCTGGGCTTTGTTaGTGTCTGCCCTGTAGATCT +
Preference number: 4 (lower is better)
Translates to: WALWDLGMLLIALRFGDPPSGLC*CLPCRS
Trigger: AGATCTACAGGGCAGACACCAACAAAGCCCAGAAGG...GGGATCACCAAATCTCAAAGCAATGAGAAGCATTCCTAAATCCCAAAGTGCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
3UTR CAA 72 bp TGGGCACTTTGGGATTTAGGAATGCTTCTCATTGCTTaGAGATTTGGTGATCCCTTCCAGTCCTCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: WALWDLGMLLIA*RFGDPFQSSPS
Trigger: AGAGGGAGAGGACTGGAAGGGATCACCAAATCTCAAAGCAATGAGAAGCATTCCTAAATCCCAAAGTGCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
3UTR CAA 72 bp GGCTGCACTAAACATCCACAAGTGGGAAACTTCTTGTaGCAGATACTGAGCTGGACACAAAAACACTCAGGC +
Preference number: 4 (lower is better)
Translates to: GCTKHPQVGNFL*QILSWTQKHSG
Trigger: GCCTGAGTGTTTTTGTGTCCAGCTCAGTATCTGCAACAAGAAGTTTCCCACTTGTGGATGTTTAGTGCAGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229003.7
ENST00000422538.8
CDS-3UTR TCA 90 bp TACAGTCTCTCTGGTCTCGTAGAGTTATTCAAATTATGGCTGCTGGATAAGGCTCCAAAGGCCCTTGCTTaGTTACTGTGGCCTTACTTC +
Preference number: 4 (lower is better)
Translates to: YSLSGLVELFKLWLLDKAPKALA*LLWPYF
Trigger: GAAGTAAGGCCACAGTAATCAAGCAAGGGCCTTTGG...AGCCTTATCCAGCAGCCATAATTTGAATAACTCTACGAGACCAGAGAGACTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229003.7
ENST00000422538.8
CDS-3UTR TCA 90 bp ATCAAAATACAAGTCTGTGGCTGCACTAAACATCCACAAGTGGGAAACTTCTTGCTGTGGCAATGGCTCTaGCTCTTTGTGGTCCTCAGT +
Preference number: 4 (lower is better)
Translates to: IKIQVCGCTKHPQVGNFLLWQWL*LFVVLS
Trigger: ACTGAGGACCACAAAGAGTCAGAGCCATTGCCACAG...CAAGAAGTTTCCCACTTGTGGATGTTTAGTGCAGCCACAGACTTGTATTTTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422538.8
CDS-3UTR CCA 90 bp TGGGCACTTTGGGATTTAGGAATGCTTCTCATTGCTTTGAGATTTGGTGATCCCTGCCATTCCCATAGGTaGACTTGTCCCAGGTATATG +
Preference number: 4 (lower is better)
Translates to: WALWDLGMLLIALRFGDPCHSHR*TCPRYM
Trigger: CATATACCTGGGACAAGTCCACCTATGGGAATGGCA...GGGATCACCAAATCTCAAAGCAATGAGAAGCATTCCTAAATCCCAAAGTGCCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS-3UTR CCA 90 bp TGGGCACTTTGGGATTTAGGAATGCTTCTCATTGCTTTGAGATTTGGTGATCCCCCTCATGCCCCTTTCTaGCTCGAAGTTCTATTAGGT +
Preference number: 4 (lower is better)
Translates to: WALWDLGMLLIALRFGDPPHAPF*LEVLLG
Trigger: ACCTAATAGAACTTCGAGCCAGAAAGGGGCATGAGG...GGGATCACCAAATCTCAAAGCAATGAGAAGCATTCCTAAATCCCAAAGTGCCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS-3UTR TCA 90 bp TCCCATGTGGGCACTTTGGGATTTAGGAATGCTTCTCATTGCTTTGAGATTTGGCTCTTCATTGCCTCTTaGATAGAGCCCAAACCACAT +
Preference number: 4 (lower is better)
Translates to: SHVGTLGFRNASHCFEIWLFIAS*IEPKPH
Trigger: ATGTGGTTTGGGCTCTATTCAAGAGGCAATGAAGAG...CCAAATCTCAAAGCAATGAGAAGCATTCCTAAATCCCAAAGTGCCCACATGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS-3UTR GCA 90 bp AGGGCAGAGAGCTATGGAGGGTTCCTACCTTCTCTGCTTGGACTCTGTTTCTTACTCATTACATCGAGATaGACAGGATTCTATTTTTCC +
Preference number: 4 (lower is better)
Translates to: RAESYGGFLPSLLGLCFLLITSR*TGFYFS
Trigger: GGAAAAATAGAATCCTGTGCATCTCGATGTAATGAG...TAAGAAACAGAGTCCAAGCAGAGAAGGTAGGAACCCTCCATAGCTCTCTGCCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000422538.8
CDS-3UTR CCA 90 bp TATCTCTTTCCCATGTGGGCACTTTGGGATTTAGGAATGCTTCTCATTGCTTTGCCTCATGCCCCTTTCTaGCTCGAAGTTCTATTAGGT +
Preference number: 4 (lower is better)
Translates to: YLFPMWALWDLGMLLIALPHAPF*LEVLLG
Trigger: ACCTAATAGAACTTCGAGCCAGAAAGGGGCATGAGG...CAAAGCAATGAGAAGCATTCCTAAATCCCAAAGTGCCCACATGGGAAAGAGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS-3UTR CCA 90 bp GGAAACTTCTTGTTGCAGATACTGAGCTGGACACAAAAACACTCAGGCCTGGAGCTAAACATCCACAAGTaGGAAACTTCTTGTTGCAGA +
Preference number: 4 (lower is better)
Translates to: GNFLLQILSWTQKHSGLELNIHK*ETSCCR
Trigger: TCTGCAACAAGAAGTTTCCCACTTGTGGATGTTTAG...CTCCAGGCCTGAGTGTTTTTGTGTCCAGCTCAGTATCTGCAACAAGAAGTTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229003.7
ENST00000422538.8
3UTR CAA 72 bp TGTGGCTGCACTAAACATCCACAAGTGGGAAACTTCTaGTTGCAGATACTGAGCTGGACACAAAAACACTCA +
Preference number: 4 (lower is better)
Translates to: CGCTKHPQVGNF*LQILSWTQKHS
Trigger: TGAGTGTTTTTGTGTCCAGCTCAGTATCTGCAACAAGAAGTTTCCCACTTGTGGATGTTTAGTGCAGCCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229003.7
ENST00000422538.8
CDS-3UTR TCA 90 bp TGGGCACTTTGGGATTTAGGAATGCTTCTCATTGCTTTGAGATTTGGTGATCCCTCTTGTTGCAGATACTaGGCTGGACACAAAAACACT +
Preference number: 4 (lower is better)
Translates to: WALWDLGMLLIALRFGDPSCCRY*AGHKNT
Trigger: AGTGTTTTTGTGTCCAGCTCAGTATCTGCAACAAGA...GGGATCACCAAATCTCAAAGCAATGAGAAGCATTCCTAAATCCCAAAGTGCCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229003.7
ENST00000422538.8
CDS-3UTR CCA 90 bp TATCTCTTTCCCATGTGGGCACTTTGGGATTTAGGAATGCTTCTCATTGCTTTGTCTCCTCTTTTGTTATaGCATCACTGCTGTGGGAGA +
Preference number: 4 (lower is better)
Translates to: YLFPMWALWDLGMLLIALSPLLL*HHCCGR
Trigger: TCTCCCACAGCAGTGATGCCATAACAAAAGAGGAGA...CAAAGCAATGAGAAGCATTCCTAAATCCCAAAGTGCCCACATGGGAAAGAGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS-3UTR CCA 90 bp TATCTCTTTCCCATGTGGGCACTTTGGGATTTAGGAATGCTTCTCATTGCTTTGGGGGAGATGCAGTTTTaGCTATTGAGAACGATGTCT +
Preference number: 4 (lower is better)
Translates to: YLFPMWALWDLGMLLIALGEMQF*LLRTMS
Trigger: AGACATCGTTCTCAATAGCCAAAACTGCATCTCCCC...CAAAGCAATGAGAAGCATTCCTAAATCCCAAAGTGCCCACATGGGAAAGAGATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS-3UTR TCA 90 bp ATCAAAATACAAGTCTGTGGCTGCACTAAACATCCACAAGTGGGAAACTTCTTGCTCTTCATTGCCTCTTaGATAGAGCCCAAACCACAT +
Preference number: 4 (lower is better)
Translates to: IKIQVCGCTKHPQVGNFLLFIAS*IEPKPH
Trigger: ATGTGGTTTGGGCTCTATTCAAGAGGCAATGAAGAG...CAAGAAGTTTCCCACTTGTGGATGTTTAGTGCAGCCACAGACTTGTATTTTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229003.7
ENST00000422538.8
CDS-3UTR GCA 90 bp ATACAAGTCTGTGGCTGCACTAAACATCCACAAGTGGGAAACTTCTTGTTGCAGAGATCTTCTCAGAGATaGTCTGAATCTCCTCTTTTG +
Preference number: 4 (lower is better)
Translates to: IQVCGCTKHPQVGNFLLQRSSQR*SESPLL
Trigger: CAAAAGAGGAGATTCAGAGCATCTCTGAGAAGATCT...CTGCAACAAGAAGTTTCCCACTTGTGGATGTTTAGTGCAGCCACAGACTTGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229003.7
ENST00000422538.8
CDS-3UTR GCA 90 bp TATCTCTTTCCCATGTGGGCACTTTGGGATTTAGGAATGCTTCTCATTGCTTTGATACAAGTCTGTGGCTaGACTAAACATCCACAAGTG +
Preference number: 4 (lower is better)
Translates to: YLFPMWALWDLGMLLIALIQVCG*TKHPQV
Trigger: CACTTGTGGATGTTTAGTGCAGCCACAGACTTGTAT...CAAAGCAATGAGAAGCATTCCTAAATCCCAAAGTGCCCACATGGGAAAGAGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229003.7
ENST00000422538.8
CDS-3UTR GCA 90 bp TACAGTCTCTCTGGTCTCGTAGAGTTATTCAAATTATGGCTGCTGGATAAGGCTATACAAGTCTGTGGCTaGACTAAACATCCACAAGTG +
Preference number: 4 (lower is better)
Translates to: YSLSGLVELFKLWLLDKAIQVCG*TKHPQV
Trigger: CACTTGTGGATGTTTAGTGCAGCCACAGACTTGTAT...AGCCTTATCCAGCAGCCATAATTTGAATAACTCTACGAGACCAGAGAGACTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229003.7
ENST00000422538.8
CDS-3UTR CCA 90 bp TACAGTCTCTCTGGTCTCGTAGAGTTATTCAAATTATGGCTGCTGGATAAGGCTCGAAGTTCTATTAGGTaGAAGACACTATGTAGGCTG +
Preference number: 4 (lower is better)
Translates to: YSLSGLVELFKLWLLDKARSSIR*KTLCRL
Trigger: CAGCCTACATAGTGTCTTCCACCTAATAGAACTTCG...AGCCTTATCCAGCAGCCATAATTTGAATAACTCTACGAGACCAGAGAGACTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229003.7
ENST00000422538.8
CDS-3UTR CCA 90 bp TGGGCACTTTGGGATTTAGGAATGCTTCTCATTGCTTTGAGATTTGGTGATCCCCTAAACATCCACAAGTaGGAAACTTCTTGTTGCAGA +
Preference number: 4 (lower is better)
Translates to: WALWDLGMLLIALRFGDPLNIHK*ETSCCR
Trigger: TCTGCAACAAGAAGTTTCCCACTTGTGGATGTTTAG...GGGATCACCAAATCTCAAAGCAATGAGAAGCATTCCTAAATCCCAAAGTGCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229003.7
ENST00000422538.8
CDS-3UTR TCA 90 bp TGGGCACTTTGGGATTTAGGAATGCTTCTCATTGCTTTGAGATTTGGTGATCCCCTTCCTAAGAACAACTaGAAACACCTTCACAGTAAA +
Preference number: 4 (lower is better)
Translates to: WALWDLGMLLIALRFGDPLPKNN*KHLHSK
Trigger: TTTACTGTGAAGGTGTTTTCAGTTGTTCTTAGGAAG...GGGATCACCAAATCTCAAAGCAATGAGAAGCATTCCTAAATCCCAAAGTGCCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229003.7
ENST00000422538.8
CDS-3UTR CCA 90 bp ATCAAAATACAAGTCTGTGGCTGCACTAAACATCCACAAGTGGGAAACTTCTTGGAACTACAGTCTCTCTaGTCTCGTAGAGTTATTCAA +
Preference number: 4 (lower is better)
Translates to: IKIQVCGCTKHPQVGNFLELQSL*SRRVIQ
Trigger: TTGAATAACTCTACGAGACCAGAGAGACTGTAGTTC...CAAGAAGTTTCCCACTTGTGGATGTTTAGTGCAGCCACAGACTTGTATTTTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229003.7
ENST00000422538.8
CDS GCA 90 bp CCTCAGCCCAGGCCAGGCCACACAGCACGGCCAATACCAGGGAGATaGAGGCCCTCATGGTGCCCAGTTGGAGGCCAAAAAGGGAGTGGC +
Preference number: 5 (lower is better)
Translates to: PQPRPGHTARPIPGR*RPSWCPVGGQKGSG
Trigger: GCCACTCCCTTTTTGGCCTCCAACTGGGCACCATGAGGGCCTGCATCTCCCTGGTATTGGCCGTGCTGTGTGGCCTGGCCTGGGCTGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000229003.7
CDS TCA 90 bp GTGCCGAGTACAAGTCTGAGAAGAGAGGGGTGGTGTGTCCCGGGCTaGCCTCTAGAGGTCGCTCTGAACGCCCCACAGGCTGTCGCTCCC +
Preference number: 5 (lower is better)
Translates to: VPSTSLRREGWCVPG*PLEVALNAPQAVAP
Trigger: GGGAGCGACAGCCTGTGGGGCGTTCAGAGCGACCTCTAGAGGTCAGCCCGGGACACACCACCCCTCTCTTCTCAGACTTGTACTCGGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551186.1
CDS GCA 90 bp TTCCAGCCCAGGCCAGGCCACACAGCACGGCCAATACCAGGGAGATaGAGGCCCTCATGGTGCCCAGTTGGAGGCCAAAAAGGGAGTGGC +
Preference number: 5 (lower is better)
Translates to: FQPRPGHTARPIPGR*RPSWCPVGGQKGSG
Trigger: GCCACTCCCTTTTTGGCCTCCAACTGGGCACCATGAGGGCCTGCATCTCCCTGGTATTGGCCGTGCTGTGTGGCCTGGCCTGGGCTGGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000422538.8
CDS GCA 90 bp AGTCAGCCCAGGCCAGGCCACACAGCACGGCCAATACCAGGGAGATaGAGGCCCTCATGGTGCCCAGTTGGAGGCCAAAAAGGGAGTGGC +
Preference number: 5 (lower is better)
Translates to: SQPRPGHTARPIPGR*RPSWCPVGGQKGSG
Trigger: GCCACTCCCTTTTTGGCCTCCAACTGGGCACCATGAGGGCCTGCATCTCCCTGGTATTGGCCGTGCTGTGTGGCCTGGCCTGGGCTGACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545824.2
CDS CCA 90 bp GGTGGTGCTTGTCAAAGGCTTCGTAGCAGCGGCCCTGGCAGGAGGTaGGTGCCGAGTACAAGTCTGAGAAGAGAGGGGTGGTGTGTCCCG +
Preference number: 5 (lower is better)
Translates to: GGACQRLRSSGPGRR*VPSTSLRREGWCVP
Trigger: CGGGACACACCACCCCTCTCTTCTCAGACTTGTACTCGGCACCCACCTCCTGCCAGGGCCGCTGCTACGAAGCCTTTGACAAGCACCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551186.1
CDS GCA 90 bp GTGCTTGTCAAAGGCTTCGTAGCAGCGGCCCTGGCAGGAGGTGGGTaGCGAGTACAAGTTGCTGGCGAGGGCCTCTTCTGTCTCTTCCTC +
Preference number: 5 (lower is better)
Translates to: VLVKGFVAAALAGGG*RVQVAGEGLFCLFL
Trigger: GAGGAAGAGACAGAAGAGGCCCTCGCCAGCAACTTGTACTCGGCACCCACCTCCTGCCAGGGCCGCTGCTACGAAGCCTTTGACAAGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229003.7
ENST00000422538.8
CDS CCA 90 bp GGTGGTGCTTGTCAAAGGCTTCGTAGCAGCGGCCCTGGCAGGAGGTaGGTGCCGAGTACAAGTTGCTGGCGAGGGCCTCTTCTGTCTCTT +
Preference number: 5 (lower is better)
Translates to: GGACQRLRSSGPGRR*VPSTSCWRGPLLSL
Trigger: AAGAGACAGAAGAGGCCCTCGCCAGCAACTTGTACTCGGCACCCACCTCCTGCCAGGGCCGCTGCTACGAAGCCTTTGACAAGCACCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229003.7
ENST00000422538.8
CDS GCA 90 bp TCCTTCATGACTGCTGTCTTCATGATCTCTCTGAGGAAGGCGTCCTaGTCGGCCAGCTCCTGGGCACTGAAGTGCTCCCCATGGCCTGTT +
Preference number: 5 (lower is better)
Translates to: SFMTAVFMISLRKAS*SASSWALKCSPWPV
Trigger: AACAGGCCATGGGGAGCACTTCAGTGCCCAGGAGCTGGCCGAGCAGGACGCCTTCCTCAGAGAGATCATGAAGACAGCAGTCATGAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS GCA 90 bp CTGGCACACTTTGCCTGGCCTGGCGATGAAGCACAGGGAGTAGAGTaGAAACTCAAACTCAGGGCTGCTGCCGATGAAAGCAGAGCCCAC +
Preference number: 5 (lower is better)
Translates to: LAHFAWPGDEAQGVE*KLKLRAAADESRAH
Trigger: GTGGGCTCTGCTTTCATCGGCAGCAGCCCTGAGTTTGAGTTTGCACTCTACTCCCTGTGCTTCATCGCCAGGCCAGGCAAAGTGTGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS-3UTR CAA 90 bp AGGCCTGGTGAGGTCAAAGGACTTCTTCCTAGTTCCCCCACACATCAGGGCAGACCTCATGGTGCCCAGTaGGAGGCCAAAAAGGGAGTG +
Preference number: 5 (lower is better)
Translates to: RPGEVKGLLPSSPTHQGRPHGAQ*EAKKGV
Trigger: CACTCCCTTTTTGGCCTCCAACTGGGCACCATGAGG...TCTGCCCTGATGTGTGGGGGAACTAGGAAGAAGTCCTTTGACCTCACCAGGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS-3UTR CAA 90 bp AAGGGAAGCATGAGGCCTGGTGAGGTCAAAGGACTTCTTCCTAGTTCCCCCACACCTCATGGTGCCCAGTaGGAGGCCAAAAAGGGAGTG +
Preference number: 5 (lower is better)
Translates to: KGSMRPGEVKGLLPSSPTPHGAQ*EAKKGV
Trigger: CACTCCCTTTTTGGCCTCCAACTGGGCACCATGAGG...TGTGGGGGAACTAGGAAGAAGTCCTTTGACCTCACCAGGCCTCATGCTTCCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS-3UTR CAA 90 bp AGGCCTGGTGAGGTCAAAGGACTTCTTCCTAGTTCCCCCACACATCAGGGCAGACTTAACTGGCACACTTaGCCTGGCCTGGCGATGAAG +
Preference number: 5 (lower is better)
Translates to: RPGEVKGLLPSSPTHQGRLNWHT*PGLAMK
Trigger: CTTCATCGCCAGGCCAGGCAAAGTGTGCCAGTTAAG...TCTGCCCTGATGTGTGGGGGAACTAGGAAGAAGTCCTTTGACCTCACCAGGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS-3UTR CAA 90 bp GTGAGGTCAAAGGACTTCTTCCTAGTTCCCCCACACATCAGGGCAGAGAGCTATCCTCATGGTGCCCAGTaGGAGGCCAAAAAGGGAGTG +
Preference number: 5 (lower is better)
Translates to: VRSKDFFLVPPHIRAESYPHGAQ*EAKKGV
Trigger: CACTCCCTTTTTGGCCTCCAACTGGGCACCATGAGG...ATAGCTCTCTGCCCTGATGTGTGGGGGAACTAGGAAGAAGTCCTTTGACCTCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS-3UTR CAA 90 bp GTCAAAGGACTTCTTCCTAGTTCCCCCACACATCAGGGCAGAGAGCTATGGAGGCTTAACTGGCACACTTaGCCTGGCCTGGCGATGAAG +
Preference number: 5 (lower is better)
Translates to: VKGLLPSSPTHQGRELWRLNWHT*PGLAMK
Trigger: CTTCATCGCCAGGCCAGGCAAAGTGTGCCAGTTAAG...CCTCCATAGCTCTCTGCCCTGATGTGTGGGGGAACTAGGAAGAAGTCCTTTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS GCA 90 bp TCTCAAAATCCTTGCAGCAGTTCCCAAACTCTTGGCAGCGGGCATTaGAGTGACATTGGTGGTGCTTGTCAAAGGCTTCGTAGCAGCGGC +
Preference number: 5 (lower is better)
Translates to: SQNPCSSSQTLGSGH*SDIGGACQRLRSSG
Trigger: GCCGCTGCTACGAAGCCTTTGACAAGCACCACCAATGTCACTGCAATGCCCGCTGCCAAGAGTTTGGGAACTGCTGCAAGGATTTTGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
ENST00000551186.1
CDS GCA 90 bp TGCTGTGGGAGACCTCGTGGTCACTACACAGGCTCTCAAAATCCTTaGAGCAGTTCCCAAACTCTTGGCAGCGGGCATTGCAGTGACATT +
Preference number: 5 (lower is better)
Translates to: CCGRPRGHYTGSQNP*SSSQTLGSGHCSDI
Trigger: AATGTCACTGCAATGCCCGCTGCCAAGAGTTTGGGAACTGCTGCAAGGATTTTGAGAGCCTGTGTAGTGACCACGAGGTCTCCCACAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
ENST00000551186.1
CDS GCA 90 bp ATAGCGATTCTGGTGATGGAGGAAGCTGTAGAGCTCCTTCATGACTaGTGTCTTCATGATCTCTCTGAGGAAGGCGTCCTGCTCGGCCAG +
Preference number: 5 (lower is better)
Translates to: IAILVMEEAVELLHD*CLHDLSEEGVLLGQ
Trigger: CTGGCCGAGCAGGACGCCTTCCTCAGAGAGATCATGAAGACAGCAGTCATGAAGGAGCTCTACAGCTTCCTCCATCACCAGAATCGCTAT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS GCA 90 bp AGCAGAGCCCACTTCCTTATAGTAGCCGTCCCAGTTGAACTGCATTaGCAGCACATCGGGGTAAGAATCCCAAGGCCCATCGTAGATGTG +
Preference number: 5 (lower is better)
Translates to: SRAHFLIVAVPVELH*QHIGVRIPRPIVDV
Trigger: CACATCTACGATGGGCCTTGGGATTCTTACCCCGATGTGCTGGCAATGCAGTTCAACTGGGACGGCTACTATAAGGAAGTGGGCTCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS-3UTR CAA 90 bp CACATCAGGGCAGAGAGCTATGGAGGGTTCCTACCTTCTCTGCTTGGACTCTGTGGCATTGCAGTGACATaGGTGGTGCTTGTCAAAGGC +
Preference number: 5 (lower is better)
Translates to: HIRAESYGGFLPSLLGLCGIAVT*VVLVKG
Trigger: GCCTTTGACAAGCACCACCAATGTCACTGCAATGCC...ACAGAGTCCAAGCAGAGAAGGTAGGAACCCTCCATAGCTCTCTGCCCTGATGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS-3UTR CAA 90 bp TCAAAGGACTTCTTCCTAGTTCCCCCACACATCAGGGCAGAGAGCTATGGAGGGGGCATTGCAGTGACATaGGTGGTGCTTGTCAAAGGC +
Preference number: 5 (lower is better)
Translates to: SKDFFLVPPHIRAESYGGGIAVT*VVLVKG
Trigger: GCCTTTGACAAGCACCACCAATGTCACTGCAATGCC...CCCTCCATAGCTCTCTGCCCTGATGTGTGGGGGAACTAGGAAGAAGTCCTTTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS-3UTR CAA 90 bp GTGGGCAAACCCCTTCCCTTTACATTAAAGGGAAGCATGAGGCCTGGTGAGGTCCGGGGAGATGCAGTTTaGGCTATTGAGAACGATGTC +
Preference number: 5 (lower is better)
Translates to: VGKPLPFTLKGSMRPGEVRGDAV*AIENDV
Trigger: GACATCGTTCTCAATAGCCAAAACTGCATCTCCCCG...GACCTCACCAGGCCTCATGCTTCCCTTTAATGTAAAGGGAAGGGGTTTGCCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000229003.7
ENST00000422538.8
CDS-3UTR CAA 90 bp ACACCCGGCTCTGTGGTACAGCATTTAGTTCTCAGTGGGGTTGGGGGACAAATGCGGGGAGATGCAGTTTaGGCTATTGAGAACGATGTC +
Preference number: 5 (lower is better)
Translates to: TPGSVVQHLVLSGVGGQMRGDAV*AIENDV
Trigger: GACATCGTTCTCAATAGCCAAAACTGCATCTCCCCG...CATTTGTCCCCCAACCCCACTGAGAACTAAATGCTGTACCACAGAGCCGGGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000229003.7
ENST00000422538.8
CDS-3UTR CAA 90 bp ATGAGGCCTGGTGAGGTCAAAGGACTTCTTCCTAGTTCCCCCACACATCAGGGCTCCCATGTGGGCACTTaGGGATTTAGGAATGCTTCT +
Preference number: 5 (lower is better)
Translates to: MRPGEVKGLLPSSPTHQGSHVGT*GFRNAS
Trigger: AGAAGCATTCCTAAATCCCAAAGTGCCCACATGGGA...GCCCTGATGTGTGGGGGAACTAGGAAGAAGTCCTTTGACCTCACCAGGCCTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS TCA 90 bp CCACTTGGTTTCTGGTCTCTGACGGGGAGATGCAGTTTTGGCTATTaGGAACGATGTCTTCCTTCTGGGCTTTGTTGGTGTCTGCCCTGT +
Preference number: 5 (lower is better)
Translates to: PLGFWSLTGRCSFGY*ERCLPSGLCWCLPC
Trigger: ACAGGGCAGACACCAACAAAGCCCAGAAGGAAGACATCGTTCTCAATAGCCAAAACTGCATCTCCCCGTCAGAGACCAGAAACCAAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
ENST00000551186.1
CDS CCA 90 bp TCGCAAGAGCCCTCATGCCCCTTTCTGGCTCGAAGTTCTATTAGGTaGAAGACACTATGTAGGCTGTGGCGATGTACTTCTTGCCATTCC +
Preference number: 5 (lower is better)
Translates to: SQEPSCPFLARSSIR*KTLCRLWRCTSCHS
Trigger: GGAATGGCAAGAAGTACATCGCCACAGCCTACATAGTGTCTTCCACCTAATAGAACTTCGAGCCAGAAAGGGGCATGAGGGCTCTTGCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS CCA 90 bp GAGAAGATAGCACTTCAGTCTCGCAAGAGCCCTCATGCCCCTTTCTaGCTCGAAGTTCTATTAGGTGGAAGACACTATGTAGGCTGTGGC +
Preference number: 5 (lower is better)
Translates to: EKIALQSRKSPHAPF*LEVLLGGRHYVGCG
Trigger: GCCACAGCCTACATAGTGTCTTCCACCTAATAGAACTTCGAGCCAGAAAGGGGCATGAGGGCTCTTGCGAGACTGAAGTGCTATCTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS-3UTR CAA 90 bp CTTCTCTCTAGTCCAGAGAAGATAGCACTTCAGTCTCGCAAGAGCCCTCATGCCCGGGGAGATGCAGTTTaGGCTATTGAGAACGATGTC +
Preference number: 5 (lower is better)
Translates to: LLSSPEKIALQSRKSPHARGDAV*AIENDV
Trigger: GACATCGTTCTCAATAGCCAAAACTGCATCTCCCCG...GGCATGAGGGCTCTTGCGAGACTGAAGTGCTATCTTCTCTGGACTAGAGAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS-3UTR CAA 90 bp TCAAAGGACTTCTTCCTAGTTCCCCCACACATCAGGGCAGAGAGCTATGGAGGGTCCCATGTGGGCACTTaGGGATTTAGGAATGCTTCT +
Preference number: 5 (lower is better)
Translates to: SKDFFLVPPHIRAESYGGSHVGT*GFRNAS
Trigger: AGAAGCATTCCTAAATCCCAAAGTGCCCACATGGGA...CCCTCCATAGCTCTCTGCCCTGATGTGTGGGGGAACTAGGAAGAAGTCCTTTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS-3UTR CAA 90 bp GATAGCACTTCAGTCTCGCAAGAGCCCTCATGCCCCTTTCTGGCTCGAAGTTCTACCAAAGGCCCTTGCTaGATTACTGTGGCCTTACTT +
Preference number: 5 (lower is better)
Translates to: DSTSVSQEPSCPFLARSSTKGPC*ITVALL
Trigger: AAGTAAGGCCACAGTAATCAAGCAAGGGCCTTTGGT...AGAACTTCGAGCCAGAAAGGGGCATGAGGGCTCTTGCGAGACTGAAGTGCTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229003.7
ENST00000422538.8
CDS TCA 90 bp AGTGAAGAGTGGCTTTGGGCAGCGATCCACTTGGTTTCTGGTCTCTaGCGGGGAGATGCAGTTTTGGCTATTGAGAACGATGTCTTCCTT +
Preference number: 5 (lower is better)
Translates to: SEEWLWAAIHLVSGL*RGDAVLAIENDVFL
Trigger: AAGGAAGACATCGTTCTCAATAGCCAAAACTGCATCTCCCCGTCAGAGACCAGAAACCAAGTGGATCGCTGCCCAAAGCCACTCTTCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
ENST00000551186.1
CDS GCA 90 bp ATGGCCTGTTGCCCGCTGGTAGTTGTTGAGGAGGTTGATGAAGGCTaGATAGGTGGGCTTGGAGAACAGCTTCTCATTGACATAAGTGAA +
Preference number: 5 (lower is better)
Translates to: MACCPLVVVEEVDEG*IGGLGEQLLIDISE
Trigger: TTCACTTATGTCAATGAGAAGCTGTTCTCCAAGCCCACCTATGCAGCCTTCATCAACCTCCTCAACAACTACCAGCGGGCAACAGGCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
ENST00000551186.1
CDS CCA 90 bp CCCTGTAGATCTTCTCAGAGATGCTCTGAATCTCCTCTTTTGTTATaGCATCACTGCTGTGGGAGACCTCGTGGTCACTACACAGGCTCT +
Preference number: 5 (lower is better)
Translates to: PCRSSQRCSESPLLL*HHCCGRPRGHYTGS
Trigger: AGAGCCTGTGTAGTGACCACGAGGTCTCCCACAGCAGTGATGCCATAACAAAAGAGGAGATTCAGAGCATCTCTGAGAAGATCTACAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
ENST00000551186.1
CDS CCA 90 bp CAGCGATCCACTTGGTTTCTGGTCTCTGACGGGGAGATGCAGTTTTaGCTATTGAGAACGATGTCTTCCTTCTGGGCTTTGTTGGTGTCT +
Preference number: 5 (lower is better)
Translates to: QRSTWFLVSDGEMQF*LLRTMSSFWALLVS
Trigger: AGACACCAACAAAGCCCAGAAGGAAGACATCGTTCTCAATAGCCAAAACTGCATCTCCCCGTCAGAGACCAGAAACCAAGTGGATCGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
ENST00000551186.1
CDS CCA 90 bp ACACTATGTAGGCTGTGGCGATGTACTTCTTGCCATTCCCATAGGTaGACTTGTCCCAGGTATATGTCCGGACAGCTAAGGGATATCCTC +
Preference number: 5 (lower is better)
Translates to: TLCRLWRCTSCHSHR*TCPRYMSGQLRDIL
Trigger: GAGGATATCCCTTAGCTGTCCGGACATATACCTGGGACAAGTCCACCTATGGGAATGGCAAGAAGTACATCGCCACAGCCTACATAGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS-3UTR CAA 90 bp TCCCATGTGGGCACTTTGGGATTTAGGAATGCTTCTCATTGCTTTGAGATTTGGGCAGTTCCCAAACTCTaGGCAGCGGGCATTGCAGTG +
Preference number: 5 (lower is better)
Translates to: SHVGTLGFRNASHCFEIWAVPKL*AAGIAV
Trigger: CACTGCAATGCCCGCTGCCAAGAGTTTGGGAACTGC...CCAAATCTCAAAGCAATGAGAAGCATTCCTAAATCCCAAAGTGCCCACATGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS-3UTR CAA 90 bp ACATCAGGGCAGAGAGCTATGGAGGGTTCCTACCTTCTCTGCTTGGACTCTGTTCCTCTTCATTGCCTCTaGAATAGAGCCCAAACCACA +
Preference number: 5 (lower is better)
Translates to: TSGQRAMEGSYLLCLDSVPLHCL*NRAQTT
Trigger: TGTGGTTTGGGCTCTATTCAAGAGGCAATGAAGAGG...AACAGAGTCCAAGCAGAGAAGGTAGGAACCCTCCATAGCTCTCTGCCCTGATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS-3UTR CAA 90 bp CCTGGTGAGGTCAAAGGACTTCTTCCTAGTTCCCCCACACATCAGGGCAGAGAGATGCTTCTCATTGCTTaGAGATTTGGTGATCCCTTC +
Preference number: 5 (lower is better)
Translates to: PGEVKGLLPSSPTHQGREMLLIA*RFGDPF
Trigger: GAAGGGATCACCAAATCTCAAAGCAATGAGAAGCAT...CTCTCTGCCCTGATGTGTGGGGGAACTAGGAAGAAGTCCTTTGACCTCACCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS-3UTR CAA 90 bp CTTCTCTCTAGTCCAGAGAAGATAGCACTTCAGTCTCGCAAGAGCCCTCATGCCCAAGTGGGAAACTTCTaGTTGCAGATACTGAGCTGG +
Preference number: 5 (lower is better)
Translates to: LLSSPEKIALQSRKSPHAQVGNF*LQILSW
Trigger: CCAGCTCAGTATCTGCAACAAGAAGTTTCCCACTTG...GGCATGAGGGCTCTTGCGAGACTGAAGTGCTATCTTCTCTGGACTAGAGAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229003.7
ENST00000422538.8
CDS GCA 90 bp TCTATTAGGTGGAAGACACTATGTAGGCTGTGGCGATGTACTTCTTaGCATTCCCATAGGTGGACTTGTCCCAGGTATATGTCCGGACAG +
Preference number: 5 (lower is better)
Translates to: SIRWKTLCRLWRCTS*HSHRWTCPRYMSGQ
Trigger: CTGTCCGGACATATACCTGGGACAAGTCCACCTATGGGAATGGCAAGAAGTACATCGCCACAGCCTACATAGTGTCTTCCACCTAATAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS-3UTR CAA 90 bp TACAGTCTCTCTGGTCTCGTAGAGTTATTCAAATTATGGCTGCTGGATAAGGCTGCAGTTCCCAAACTCTaGGCAGCGGGCATTGCAGTG +
Preference number: 5 (lower is better)
Translates to: YSLSGLVELFKLWLLDKAAVPKL*AAGIAV
Trigger: CACTGCAATGCCCGCTGCCAAGAGTTTGGGAACTGC...AGCCTTATCCAGCAGCCATAATTTGAATAACTCTACGAGACCAGAGAGACTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229003.7
ENST00000422538.8
CDS-3UTR CAA 90 bp CACATCAGGGCAGAGAGCTATGGAGGGTTCCTACCTTCTCTGCTTGGACTCTGTTCTGAATCTCCTCTTTaGTTATGGCATCACTGCTGT +
Preference number: 5 (lower is better)
Translates to: HIRAESYGGFLPSLLGLCSESPL*LWHHCC
Trigger: ACAGCAGTGATGCCATAACAAAAGAGGAGATTCAGA...ACAGAGTCCAAGCAGAGAAGGTAGGAACCCTCCATAGCTCTCTGCCCTGATGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS-3UTR CAA 90 bp AAGGGAAGCATGAGGCCTGGTGAGGTCAAAGGACTTCTTCCTAGTTCCCCCACAATGCAGTTTTGGCTATaGAGAACGATGTCTTCCTTC +
Preference number: 5 (lower is better)
Translates to: KGSMRPGEVKGLLPSSPTMQFWL*RTMSSF
Trigger: GAAGGAAGACATCGTTCTCAATAGCCAAAACTGCAT...TGTGGGGGAACTAGGAAGAAGTCCTTTGACCTCACCAGGCCTCATGCTTCCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS-3UTR CAA 90 bp GATAGCACTTCAGTCTCGCAAGAGCCCTCATGCCCCTTTCTGGCTCGAAGTTCTATGCTTCTCATTGCTTaGAGATTTGGTGATCCCTTC +
Preference number: 5 (lower is better)
Translates to: DSTSVSQEPSCPFLARSSMLLIA*RFGDPF
Trigger: GAAGGGATCACCAAATCTCAAAGCAATGAGAAGCAT...AGAACTTCGAGCCAGAAAGGGGCATGAGGGCTCTTGCGAGACTGAAGTGCTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS-3UTR CAA 90 bp ACCCGGCTCTGTGGTACAGCATTTAGTTCTCAGTGGGGTTGGGGGACAAATGCAATGCTTCTCATTGCTTaGAGATTTGGTGATCCCTTC +
Preference number: 5 (lower is better)
Translates to: TRLCGTAFSSQWGWGTNAMLLIA*RFGDPF
Trigger: GAAGGGATCACCAAATCTCAAAGCAATGAGAAGCAT...TGCATTTGTCCCCCAACCCCACTGAGAACTAAATGCTGTACCACAGAGCCGGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000229003.7
ENST00000422538.8
CDS-3UTR CAA 90 bp AGGGCAGAGAGCTATGGAGGGTTCCTACCTTCTCTGCTTGGACTCTGTTTCTTAACCAAAGGCCCTTGCTaGATTACTGTGGCCTTACTT +
Preference number: 5 (lower is better)
Translates to: RAESYGGFLPSLLGLCFLTKGPC*ITVALL
Trigger: AAGTAAGGCCACAGTAATCAAGCAAGGGCCTTTGGT...TAAGAAACAGAGTCCAAGCAGAGAAGGTAGGAACCCTCCATAGCTCTCTGCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229003.7
ENST00000422538.8
CDS-3UTR CAA 90 bp GTGAGGTCAAAGGACTTCTTCCTAGTTCCCCCACACATCAGGGCAGAGAGCTATAAAAACCAAAGGCCCTaGCTTGATTACTGTGGCCTT +
Preference number: 5 (lower is better)
Translates to: VRSKDFFLVPPHIRAESYKNQRP*LDYCGL
Trigger: AAGGCCACAGTAATCAAGCAAGGGCCTTTGGTTTTT...ATAGCTCTCTGCCCTGATGTGTGGGGGAACTAGGAAGAAGTCCTTTGACCTCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000229003.7
ENST00000422538.8
CDS-3UTR CAA 90 bp GGAAACTTCTTGTTGCAGATACTGAGCTGGACACAAAAACACTCAGGCCTGGAGCCTCTTCATTGCCTCTaGAATAGAGCCCAAACCACA +
Preference number: 5 (lower is better)
Translates to: GNFLLQILSWTQKHSGLEPLHCL*NRAQTT
Trigger: TGTGGTTTGGGCTCTATTCAAGAGGCAATGAAGAGG...CTCCAGGCCTGAGTGTTTTTGTGTCCAGCTCAGTATCTGCAACAAGAAGTTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229003.7
ENST00000422538.8
CDS-3UTR CAA 90 bp TACAGTCTCTCTGGTCTCGTAGAGTTATTCAAATTATGGCTGCTGGATAAGGCTCTTAACTGGCACACTTaGCCTGGCCTGGCGATGAAG +
Preference number: 5 (lower is better)
Translates to: YSLSGLVELFKLWLLDKALNWHT*PGLAMK
Trigger: CTTCATCGCCAGGCCAGGCAAAGTGTGCCAGTTAAG...AGCCTTATCCAGCAGCCATAATTTGAATAACTCTACGAGACCAGAGAGACTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229003.7
ENST00000422538.8
CDS TCA 90 bp GAAGACATGTTCAAAGCCACTCGAGTCCCCCTCTTCATTGCCTCTTaGATAGAGCCCAAACCACATGTTCTTCAAGTCATCGACAAACTC +
Preference number: 5 (lower is better)
Translates to: EDMFKATRVPLFIAS*IEPKPHVLQVIDKL
Trigger: GAGTTTGTCGATGACTTGAAGAACATGTGGTTTGGGCTCTATTCAAGAGGCAATGAAGAGGGGGACTCGAGTGGCTTTGAACATGTCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS-3UTR CAA 90 bp AGGGCAGAGAGCTATGGAGGGTTCCTACCTTCTCTGCTTGGACTCTGTTTCTTATCTGAATCTCCTCTTTaGTTATGGCATCACTGCTGT +
Preference number: 5 (lower is better)
Translates to: RAESYGGFLPSLLGLCFLSESPL*LWHHCC
Trigger: ACAGCAGTGATGCCATAACAAAAGAGGAGATTCAGA...TAAGAAACAGAGTCCAAGCAGAGAAGGTAGGAACCCTCCATAGCTCTCTGCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS GCA 90 bp TTGGCTATTGAGAACGATGTCTTCCTTCTGGGCTTTGTTGGTGTCTaGCCTGTAGATCTTCTCAGAGATGCTCTGAATCTCCTCTTTTGT +
Preference number: 5 (lower is better)
Translates to: LAIENDVFLLGFVGV*PVDLLRDALNLLFC
Trigger: ACAAAAGAGGAGATTCAGAGCATCTCTGAGAAGATCTACAGGGCAGACACCAACAAAGCCCAGAAGGAAGACATCGTTCTCAATAGCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
ENST00000551186.1
CDS-3UTR CAA 90 bp TCCCATGTGGGCACTTTGGGATTTAGGAATGCTTCTCATTGCTTTGAGATTTGGCCTCTTCATTGCCTCTaGAATAGAGCCCAAACCACA +
Preference number: 5 (lower is better)
Translates to: SHVGTLGFRNASHCFEIWPLHCL*NRAQTT
Trigger: TGTGGTTTGGGCTCTATTCAAGAGGCAATGAAGAGG...CCAAATCTCAAAGCAATGAGAAGCATTCCTAAATCCCAAAGTGCCCACATGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS-3UTR CAA 90 bp TACAGTCTCTCTGGTCTCGTAGAGTTATTCAAATTATGGCTGCTGGATAAGGCTTCCCATGTGGGCACTTaGGGATTTAGGAATGCTTCT +
Preference number: 5 (lower is better)
Translates to: YSLSGLVELFKLWLLDKASHVGT*GFRNAS
Trigger: AGAAGCATTCCTAAATCCCAAAGTGCCCACATGGGA...AGCCTTATCCAGCAGCCATAATTTGAATAACTCTACGAGACCAGAGAGACTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229003.7
ENST00000422538.8
CDS-3UTR CAA 90 bp TCCCATGTGGGCACTTTGGGATTTAGGAATGCTTCTCATTGCTTTGAGATTTGGAAAAACCAAAGGCCCTaGCTTGATTACTGTGGCCTT +
Preference number: 5 (lower is better)
Translates to: SHVGTLGFRNASHCFEIWKNQRP*LDYCGL
Trigger: AAGGCCACAGTAATCAAGCAAGGGCCTTTGGTTTTT...CCAAATCTCAAAGCAATGAGAAGCATTCCTAAATCCCAAAGTGCCCACATGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000229003.7
ENST00000422538.8
CDS-3UTR CAA 90 bp TATCTCTTTCCCATGTGGGCACTTTGGGATTTAGGAATGCTTCTCATTGCTTTGGTGGGAAACTTCTTGTaGCAGATACTGAGCTGGACA +
Preference number: 5 (lower is better)
Translates to: YLFPMWALWDLGMLLIALVGNFL*QILSWT
Trigger: TGTCCAGCTCAGTATCTGCAACAAGAAGTTTCCCAC...CAAAGCAATGAGAAGCATTCCTAAATCCCAAAGTGCCCACATGGGAAAGAGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229003.7
ENST00000422538.8
CDS-3UTR CAA 90 bp ATACAAGTCTGTGGCTGCACTAAACATCCACAAGTGGGAAACTTCTTGTTGCAGTCTGAATCTCCTCTTTaGTTATGGCATCACTGCTGT +
Preference number: 5 (lower is better)
Translates to: IQVCGCTKHPQVGNFLLQSESPL*LWHHCC
Trigger: ACAGCAGTGATGCCATAACAAAAGAGGAGATTCAGA...CTGCAACAAGAAGTTTCCCACTTGTGGATGTTTAGTGCAGCCACAGACTTGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229003.7
ENST00000422538.8
CDS-3UTR CAA 90 bp ATACAAGTCTGTGGCTGCACTAAACATCCACAAGTGGGAAACTTCTTGTTGCAGATGCAGTTTTGGCTATaGAGAACGATGTCTTCCTTC +
Preference number: 5 (lower is better)
Translates to: IQVCGCTKHPQVGNFLLQMQFWL*RTMSSF
Trigger: GAAGGAAGACATCGTTCTCAATAGCCAAAACTGCAT...CTGCAACAAGAAGTTTCCCACTTGTGGATGTTTAGTGCAGCCACAGACTTGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229003.7
ENST00000422538.8
CDS-3UTR CAA 90 bp TGGGCACTTTGGGATTTAGGAATGCTTCTCATTGCTTTGAGATTTGGTGATCCCATGCAGTTTTGGCTATaGAGAACGATGTCTTCCTTC +
Preference number: 5 (lower is better)
Translates to: WALWDLGMLLIALRFGDPMQFWL*RTMSSF
Trigger: GAAGGAAGACATCGTTCTCAATAGCCAAAACTGCAT...GGGATCACCAAATCTCAAAGCAATGAGAAGCATTCCTAAATCCCAAAGTGCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS-3UTR CAA 90 bp ATCAAAATACAAGTCTGTGGCTGCACTAAACATCCACAAGTGGGAAACTTCTTGGTGGGAAACTTCTTGTaGCAGATACTGAGCTGGACA +
Preference number: 5 (lower is better)
Translates to: IKIQVCGCTKHPQVGNFLVGNFL*QILSWT
Trigger: TGTCCAGCTCAGTATCTGCAACAAGAAGTTTCCCAC...CAAGAAGTTTCCCACTTGTGGATGTTTAGTGCAGCCACAGACTTGTATTTTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229003.7
ENST00000422538.8
CDS-3UTR CAA 90 bp ATCAAAATACAAGTCTGTGGCTGCACTAAACATCCACAAGTGGGAAACTTCTTGCAAGTGGGAAACTTCTaGTTGCAGATACTGAGCTGG +
Preference number: 5 (lower is better)
Translates to: IKIQVCGCTKHPQVGNFLQVGNF*LQILSW
Trigger: CCAGCTCAGTATCTGCAACAAGAAGTTTCCCACTTG...CAAGAAGTTTCCCACTTGTGGATGTTTAGTGCAGCCACAGACTTGTATTTTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000229003.7
ENST00000422538.8
CDS TCA 72 bp GCGGCCCTGGCAGGAGGTGGGTGCCGAGTACAAGTCTaGGAAGAGAGGGGTGGTGTGTCCCGGGCTGACCTC +
Preference number: 6 (lower is better)
Translates to: AALAGGGCRVQV*EERGGVSRADL
Trigger: GAGGTCAGCCCGGGACACACCACCCCTCTCTTCTCAGACTTGTACTCGGCACCCACCTCCTGCCAGGGCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551186.1
CDS CCA 72 bp TGTCAAAGGCTTCGTAGCAGCGGCCCTGGCAGGAGGTaGGTGCCGAGTACAAGTCAGCCCAGGCCAGGCCAC +
Preference number: 6 (lower is better)
Translates to: CQRLRSSGPGRR*VPSTSQPRPGH
Trigger: GTGGCCTGGCCTGGGCTGACTTGTACTCGGCACCCACCTCCTGCCAGGGCCGCTGCTACGAAGCCTTTGACA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545824.2
CDS GCA 72 bp AGCGGCCCTGGCAGGAGGTGGGTGCCGAGTACAAGTTaGTGGCGAGGGCCTCTTCTGTCTCTTCCTCCAGCT +
Preference number: 6 (lower is better)
Translates to: SGPGRRWVPSTS*WRGPLLSLPPA
Trigger: AGCTGGAGGAAGAGACAGAAGAGGCCCTCGCCAGCAACTTGTACTCGGCACCCACCTCCTGCCAGGGCCGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229003.7
ENST00000422538.8
CDS GCA 72 bp AAAGGCTTCGTAGCAGCGGCCCTGGCAGGAGGTGGGTaGCGAGTACAAGTTGCTGGCGAGGGCCTCTTCTGT +
Preference number: 6 (lower is better)
Translates to: KGFVAAALAGGG*RVQVAGEGLFC
Trigger: ACAGAAGAGGCCCTCGCCAGCAACTTGTACTCGGCACCCACCTCCTGCCAGGGCCGCTGCTACGAAGCCTTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229003.7
ENST00000422538.8
CDS CCA 72 bp TGTCAAAGGCTTCGTAGCAGCGGCCCTGGCAGGAGGTaGGTGCCGAGTACAAGTTGCTGGCGAGGGCCTCTT +
Preference number: 6 (lower is better)
Translates to: CQRLRSSGPGRR*VPSTSCWRGPL
Trigger: AAGAGGCCCTCGCCAGCAACTTGTACTCGGCACCCACCTCCTGCCAGGGCCGCTGCTACGAAGCCTTTGACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000229003.7
ENST00000422538.8
CDS TCA 72 bp ACAAGTCTGAGAAGAGAGGGGTGGTGTGTCCCGGGCTaGCCTCTAGAGGTCGCTCTGAACGCCCCACAGGCT +
Preference number: 6 (lower is better)
Translates to: TSLRREGWCVPG*PLEVALNAPQA
Trigger: AGCCTGTGGGGCGTTCAGAGCGACCTCTAGAGGTCAGCCCGGGACACACCACCCCTCTCTTCTCAGACTTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551186.1
CDS GCA 72 bp AGGCCAGGCCACACAGCACGGCCAATACCAGGGAGATaGAGGCCCTCATGGTGCCCAGTTGGAGGCCAAAAA +
Preference number: 6 (lower is better)
Translates to: RPGHTARPIPGR*RPSWCPVGGQK
Trigger: TTTTTGGCCTCCAACTGGGCACCATGAGGGCCTGCATCTCCCTGGTATTGGCCGTGCTGTGTGGCCTGGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS CCA 72 bp TGTCAAAGGCTTCGTAGCAGCGGCCCTGGCAGGAGGTaGGTGCCGAGTACAAGTCTGAGAAGAGAGGGGTGG +
Preference number: 6 (lower is better)
Translates to: CQRLRSSGPGRR*VPSTSLRREGW
Trigger: CCACCCCTCTCTTCTCAGACTTGTACTCGGCACCCACCTCCTGCCAGGGCCGCTGCTACGAAGCCTTTGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551186.1
CDS GCA 72 bp ACTGCTGTCTTCATGATCTCTCTGAGGAAGGCGTCCTaGTCGGCCAGCTCCTGGGCACTGAAGTGCTCCCCA +
Preference number: 6 (lower is better)
Translates to: TAVFMISLRKAS*SASSWALKCSP
Trigger: TGGGGAGCACTTCAGTGCCCAGGAGCTGGCCGAGCAGGACGCCTTCCTCAGAGAGATCATGAAGACAGCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS CAA 90 bp CTTGCAGCAGTTCCCAAACTCTTGGCAGCGGGCATTGCAGTGACATaGGTGGTGCTTGTCAAAGGCTTCGTAGCAGCGGCCCTGGCAGGA +
Preference number: 6 (lower is better)
Translates to: LAAVPKLLAAGIAVT*VVLVKGFVAAALAG
Trigger: TCCTGCCAGGGCCGCTGCTACGAAGCCTTTGACAAGCACCACCAATGTCACTGCAATGCCCGCTGCCAAGAGTTTGGGAACTGCTGCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
ENST00000551186.1
CDS CAA 72 bp GTTCCCAAACTCTTGGCAGCGGGCATTGCAGTGACATaGGTGGTGCTTGTCAAAGGCTTCGTAGCAGCGGCC +
Preference number: 6 (lower is better)
Translates to: VPKLLAAGIAVT*VVLVKGFVAAA
Trigger: GGCCGCTGCTACGAAGCCTTTGACAAGCACCACCAATGTCACTGCAATGCCCGCTGCCAAGAGTTTGGGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
ENST00000551186.1
CDS CCA 72 bp CAGCAGTTCCCATGCCAGAGACACCGGCGGTCACACTaGCAGGCAGCGTCCCGGTTAAATTTCTCATTACAT +
Preference number: 6 (lower is better)
Translates to: QQFPCQRHRRSH*QAASRLNFSLH
Trigger: ATGTAATGAGAAATTTAACCGGGACGCTGCCTGCCAGTGTGACCGCCGGTGTCTCTGGCATGGGAACTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422538.8
CDS TCA 72 bp CCAGGCTTAACTGGCACACTTTGCCTGGCCTGGCGATaGAGCACAGGGAGTAGAGTGCAAACTCAAACTCAG +
Preference number: 6 (lower is better)
Translates to: PGLTGTLCLAWR*STGSRVQTQTQ
Trigger: CTGAGTTTGAGTTTGCACTCTACTCCCTGTGCTTCATCGCCAGGCCAGGCAAAGTGTGCCAGTTAAGCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS GCA 72 bp CCTTGCAGCAGTTCCCAAACTCTTGGCAGCGGGCATTaGAGTGACATTGGTGGTGCTTGTCAAAGGCTTCGT +
Preference number: 6 (lower is better)
Translates to: PCSSSQTLGSGH*SDIGGACQRLR
Trigger: ACGAAGCCTTTGACAAGCACCACCAATGTCACTGCAATGCCCGCTGCCAAGAGTTTGGGAACTGCTGCAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
ENST00000551186.1
CDS TCA 72 bp AAGCAGAGCCCACTTCCTTATAGTAGCCGTCCCAGTTaGACTGCATTGCCAGCACATCGGGGTAAGAATCCC +
Preference number: 6 (lower is better)
Translates to: KQSPLPYSSRPS*TALPAHRGKNP
Trigger: GGGATTCTTACCCCGATGTGCTGGCAATGCAGTTCAACTGGGACGGCTACTATAAGGAAGTGGGCTCTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS GCA 72 bp TGCCCGCTGGTAGTTGTTGAGGAGGTTGATGAAGGCTaGATAGGTGGGCTTGGAGAACAGCTTCTCATTGAC +
Preference number: 6 (lower is better)
Translates to: CPLVVVEEVDEG*IGGLGEQLLID
Trigger: GTCAATGAGAAGCTGTTCTCCAAGCCCACCTATGCAGCCTTCATCAACCTCCTCAACAACTACCAGCGGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
ENST00000551186.1
CDS GCA 72 bp CACTTCCTTATAGTAGCCGTCCCAGTTGAACTGCATTaGCAGCACATCGGGGTAAGAATCCCAAGGCCCATC +
Preference number: 6 (lower is better)
Translates to: HFLIVAVPVELH*QHIGVRIPRPI
Trigger: GATGGGCCTTGGGATTCTTACCCCGATGTGCTGGCAATGCAGTTCAACTGGGACGGCTACTATAAGGAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS CCA 72 bp AGGCTGTGGCGATGTACTTCTTGCCATTCCCATAGGTaGACTTGTCCCAGGTATATGTCCGGACAGCTAAGG +
Preference number: 6 (lower is better)
Translates to: RLWRCTSCHSHR*TCPRYMSGQLR
Trigger: CCTTAGCTGTCCGGACATATACCTGGGACAAGTCCACCTATGGGAATGGCAAGAAGTACATCGCCACAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS CAA 72 bp CAGGCTCTCAAAATCCTTGCAGCAGTTCCCAAACTCTaGGCAGCGGGCATTGCAGTGACATTGGTGGTGCTT +
Preference number: 6 (lower is better)
Translates to: QALKILAAVPKL*AAGIAVTLVVL
Trigger: AAGCACCACCAATGTCACTGCAATGCCCGCTGCCAAGAGTTTGGGAACTGCTGCAAGGATTTTGAGAGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
ENST00000551186.1
CDS CAA 90 bp GTCACTACACAGGCTCTCAAAATCCTTGCAGCAGTTCCCAAACTCTaGGCAGCGGGCATTGCAGTGACATTGGTGGTGCTTGTCAAAGGC +
Preference number: 6 (lower is better)
Translates to: VTTQALKILAAVPKL*AAGIAVTLVVLVKG
Trigger: GCCTTTGACAAGCACCACCAATGTCACTGCAATGCCCGCTGCCAAGAGTTTGGGAACTGCTGCAAGGATTTTGAGAGCCTGTGTAGTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
ENST00000551186.1
CDS CAA 90 bp TCCACTTGGTTTCTGGTCTCTGACGGGGAGATGCAGTTTTGGCTATaGAGAACGATGTCTTCCTTCTGGGCTTTGTTGGTGTCTGCCCTG +
Preference number: 6 (lower is better)
Translates to: STWFLVSDGEMQFWL*RTMSSFWALLVSAL
Trigger: CAGGGCAGACACCAACAAAGCCCAGAAGGAAGACATCGTTCTCAATAGCCAAAACTGCATCTCCCCGTCAGAGACCAGAAACCAAGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
ENST00000551186.1
CDS TCA 72 bp TGGCTTTGGGCAGCGATCCACTTGGTTTCTGGTCTCTaGCGGGGAGATGCAGTTTTGGCTATTGAGAACGAT +
Preference number: 6 (lower is better)
Translates to: WLWAAIHLVSGL*RGDAVLAIEND
Trigger: ATCGTTCTCAATAGCCAAAACTGCATCTCCCCGTCAGAGACCAGAAACCAAGTGGATCGCTGCCCAAAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
ENST00000551186.1
CDS GCA 72 bp GGCAGCGTCCCGGTTAAATTTCTCATTACATCGAGATaGACAGGATTCTATTTTTCCAGCCCAGGCCAGGCC +
Preference number: 6 (lower is better)
Translates to: GSVPVKFLITSR*TGFYFSSPGQA
Trigger: GGCCTGGCCTGGGCTGGAAAAATAGAATCCTGTGCATCTCGATGTAATGAGAAATTTAACCGGGACGCTGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000422538.8
CDS GCA 72 bp AGATGCTCTGAATCTCCTCTTTTGTTATGGCATCACTaGTGTGGGAGACCTCGTGGTCACTACACAGGCTCT +
Preference number: 6 (lower is better)
Translates to: RCSESPLLLWHH*CGRPRGHYTGS
Trigger: AGAGCCTGTGTAGTGACCACGAGGTCTCCCACAGCAGTGATGCCATAACAAAAGAGGAGATTCAGAGCATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
ENST00000551186.1
CDS GCA 72 bp AGAGAAGATAGCACTTCAGTCTCGCAAGAGCCCTCATaGCCCTTTCTGGCTCGAAGTTCTATTAGGTGGAAG +
Preference number: 6 (lower is better)
Translates to: REDSTSVSQEPS*PFLARSSIRWK
Trigger: CTTCCACCTAATAGAACTTCGAGCCAGAAAGGGGCATGAGGGCTCTTGCGAGACTGAAGTGCTATCTTCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS CCA 72 bp CCCTCATGCCCCTTTCTGGCTCGAAGTTCTATTAGGTaGAAGACACTATGTAGGCTGTGGCGATGTACTTCT +
Preference number: 6 (lower is better)
Translates to: PSCPFLARSSIR*KTLCRLWRCTS
Trigger: AGAAGTACATCGCCACAGCCTACATAGTGTCTTCCACCTAATAGAACTTCGAGCCAGAAAGGGGCATGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS CCA 72 bp GCACTTCAGTCTCGCAAGAGCCCTCATGCCCCTTTCTaGCTCGAAGTTCTATTAGGTGGAAGACACTATGTA +
Preference number: 6 (lower is better)
Translates to: ALQSRKSPHAPF*LEVLLGGRHYV
Trigger: TACATAGTGTCTTCCACCTAATAGAACTTCGAGCCAGAAAGGGGCATGAGGGCTCTTGCGAGACTGAAGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS CAA 90 bp TGTCTGCCCTGTAGATCTTCTCAGAGATGCTCTGAATCTCCTCTTTaGTTATGGCATCACTGCTGTGGGAGACCTCGTGGTCACTACACA +
Preference number: 6 (lower is better)
Translates to: CLPCRSSQRCSESPL*LWHHCCGRPRGHYT
Trigger: TGTGTAGTGACCACGAGGTCTCCCACAGCAGTGATGCCATAACAAAAGAGGAGATTCAGAGCATCTCTGAGAAGATCTACAGGGCAGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
ENST00000551186.1
CDS TCA 72 bp TTCTGGTCTCTGACGGGGAGATGCAGTTTTGGCTATTaGGAACGATGTCTTCCTTCTGGGCTTTGTTGGTGT +
Preference number: 6 (lower is better)
Translates to: FWSLTGRCSFGY*ERCLPSGLCWC
Trigger: ACACCAACAAAGCCCAGAAGGAAGACATCGTTCTCAATAGCCAAAACTGCATCTCCCCGTCAGAGACCAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
ENST00000551186.1
CDS GCA 72 bp GAGAACGATGTCTTCCTTCTGGGCTTTGTTGGTGTCTaGCCTGTAGATCTTCTCAGAGATGCTCTGAATCTC +
Preference number: 6 (lower is better)
Translates to: ENDVFLLGFVGV*PVDLLRDALNL
Trigger: GAGATTCAGAGCATCTCTGAGAAGATCTACAGGGCAGACACCAACAAAGCCCAGAAGGAAGACATCGTTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
ENST00000551186.1
CDS GCA 72 bp TGGAAGACACTATGTAGGCTGTGGCGATGTACTTCTTaGCATTCCCATAGGTGGACTTGTCCCAGGTATATG +
Preference number: 6 (lower is better)
Translates to: WKTLCRLWRCTS*HSHRWTCPRYM
Trigger: CATATACCTGGGACAAGTCCACCTATGGGAATGGCAAGAAGTACATCGCCACAGCCTACATAGTGTCTTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS CCA 72 bp TCTTCTCAGAGATGCTCTGAATCTCCTCTTTTGTTATaGCATCACTGCTGTGGGAGACCTCGTGGTCACTAC +
Preference number: 6 (lower is better)
Translates to: SSQRCSESPLLL*HHCCGRPRGHY
Trigger: GTAGTGACCACGAGGTCTCCCACAGCAGTGATGCCATAACAAAAGAGGAGATTCAGAGCATCTCTGAGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
ENST00000551186.1
CDS CCA 72 bp ACTTGGTTTCTGGTCTCTGACGGGGAGATGCAGTTTTaGCTATTGAGAACGATGTCTTCCTTCTGGGCTTTG +
Preference number: 6 (lower is better)
Translates to: TWFLVSDGEMQF*LLRTMSSFWAL
Trigger: CAAAGCCCAGAAGGAAGACATCGTTCTCAATAGCCAAAACTGCATCTCCCCGTCAGAGACCAGAAACCAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
ENST00000551186.1
CDS TCA 72 bp TTCAAAGCCACTCGAGTCCCCCTCTTCATTGCCTCTTaGATAGAGCCCAAACCACATGTTCTTCAAGTCATC +
Preference number: 6 (lower is better)
Translates to: FKATRVPLFIAS*IEPKPHVLQVI
Trigger: GATGACTTGAAGAACATGTGGTTTGGGCTCTATTCAAGAGGCAATGAAGAGGGGGACTCGAGTGGCTTTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS TCA 72 bp ATTCGTGCACACCCTTCACAGTCAGGAAGTCCTTTCTaGTGCCGAACTTTACTTTCTGGCCTGCTGTTTTTC +
Preference number: 6 (lower is better)
Translates to: IRAHPSQSGSPF*CRTLLSGLLFF
Trigger: GAAAAACAGCAGGCCAGAAAGTAAAGTTCGGCATCAGAAAGGACTTCCTGACTGTGAAGGGTGTGCACGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551186.1
CDS CCA 72 bp CGAAGTTCTATTAGGTGGAAGACACTATGTAGGCTGTaGCGATGTACTTCTTGCCATTCCCATAGGTGGACT +
Preference number: 6 (lower is better)
Translates to: RSSIRWKTLCRL*RCTSCHSHRWT
Trigger: AGTCCACCTATGGGAATGGCAAGAAGTACATCGCCACAGCCTACATAGTGTCTTCCACCTAATAGAACTTCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS CAA 72 bp TGTAGATCTTCTCAGAGATGCTCTGAATCTCCTCTTTaGTTATGGCATCACTGCTGTGGGAGACCTCGTGGT +
Preference number: 6 (lower is better)
Translates to: CRSSQRCSESPL*LWHHCCGRPRG
Trigger: ACCACGAGGTCTCCCACAGCAGTGATGCCATAACAAAAGAGGAGATTCAGAGCATCTCTGAGAAGATCTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
ENST00000551186.1
CDS CAA 72 bp GTTCAAAGCCACTCGAGTCCCCCTCTTCATTGCCTCTaGAATAGAGCCCAAACCACATGTTCTTCAAGTCAT +
Preference number: 6 (lower is better)
Translates to: VQSHSSPPLHCL*NRAQTTCSSSH
Trigger: ATGACTTGAAGAACATGTGGTTTGGGCTCTATTCAAGAGGCAATGAAGAGGGGGACTCGAGTGGCTTTGAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2
CDS CAA 90 bp AGAAGACATGTTCAAAGCCACTCGAGTCCCCCTCTTCATTGCCTCTaGAATAGAGCCCAAACCACATGTTCTTCAAGTCATCGACAAACT +
Preference number: 6 (lower is better)
Translates to: RRHVQSHSSPPLHCL*NRAQTTCSSSHRQT
Trigger: AGTTTGTCGATGACTTGAAGAACATGTGGTTTGGGCTCTATTCAAGAGGCAATGAAGAGGGGGACTCGAGTGGCTTTGAACATGTCTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000229003.7
ENST00000422538.8
ENST00000545824.2