RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EMX1 (Homo sapiens)

Ensembl gene IDs: ENSG00000135638

Ensembl transcript IDs: ENST00000258106.11, ENST00000394111.6, ENST00000464675.2, ENST00000473732.1, ENST00000491023.3, ENST00000616281.1

Found 257 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTCTGCCCTCGTGGGTTTGTGGTTGCCCACCCTAGTCATTGGAGGTaGCATCGATGTCCTCCCCATTGGCCTGCTTCGTGGCAATGCGCC +
Preference number: 1 (lower is better)
Translates to: LCPRGFVVAHPSHWR*HRCPPHWPASWQCA
Trigger: GGCGCATTGCCACGAAGCAGGCCAATGGGGAGGACATCGATGTCACCTCCAATGACTAGGGTGGGCAACCACAAACCCACGAGGGCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394111.6
3UTR GCA 90 bp GAGTCACTGGGGACTGGTTGCAGGCTCAGCCTTAAGCCCTGTCTCTaGAGTCTCAACCTGCCCAGCGGTTCTCCAAGGACAGGTGAGCAT +
Preference number: 1 (lower is better)
Translates to: ESLGTGCRLSLKPCL*SLNLPSGSPRTGEH
Trigger: ATGCTCACCTGTCCTTGGAGAACCGCTGGGCAGGTTGAGACTGCAGAGACAGGGCTTAAGGCTGAGCCTGCAACCAGTCCCCAGTGACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258106.11
3UTR-3UTR CCA 90 bp CCAGGCCTCAGCCAGCCCATTGCTTGTCCCTCTGTCAATGGCGGCCCCGGGCTTGGCCAGAGTCCAGCTTaGGCCCACGCAGGGGCCTGG +
Preference number: 2 (lower is better)
Translates to: PGLSQPIACPSVNGGPGLGQSPA*AHAGAW
Trigger: CCAGGCCCCTGCGTGGGCCCAAGCTGGACTCTGGCC...AAGCCCGGGGCCGCCATTGACAGAGGGACAAGCAATGGGCTGGCTGAGGCCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258106.11
ENST00000394111.6
3UTR-3UTR CCA 90 bp CCTCAGCCAGCCCATTGCTTGTCCCTCTGTCAATGGCGGCCCCGGGCTTCAAGCGCCCACGCAGGGGCCTaGCCAGCAGCAAGCAGCACT +
Preference number: 2 (lower is better)
Translates to: PQPAHCLSLCQWRPRASSAHAGA*PAASST
Trigger: AGTGCTGCTTGCTGCTGGCCAGGCCCCTGCGTGGGC...GCTTGAAGCCCGGGGCCGCCATTGACAGAGGGACAAGCAATGGGCTGGCTGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258106.11
ENST00000394111.6
3UTR-3UTR CCA 90 bp CCTCAGCCAGCCCATTGCTTGTCCCTCTGTCAATGGCGGCCCCGGGCTTCAAGCGGCCTCCCCAAAGCCTaGCCAGGGAGTGGCCAGAGT +
Preference number: 2 (lower is better)
Translates to: PQPAHCLSLCQWRPRASSGLPKA*PGSGQS
Trigger: ACTCTGGCCACTCCCTGGCCAGGCTTTGGGGAGGCC...GCTTGAAGCCCGGGGCCGCCATTGACAGAGGGACAAGCAATGGGCTGGCTGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258106.11
ENST00000394111.6
3UTR CAA 90 bp CTCTCCGAGGAGAAGGCCAAGTGGTCCCAGGCCTCAGCCAGCCCATaGCTTGTCCCTCTGTCAATGGCGGCCCCGGGCTTCAAGCCCTGT +
Preference number: 2 (lower is better)
Translates to: LSEEKAKWSQASASP*LVPLSMAAPGFKPC
Trigger: ACAGGGCTTGAAGCCCGGGGCCGCCATTGACAGAGGGACAAGCAATGGGCTGGCTGAGGCCTGGGACCACTTGGCCTTCTCCTCGGAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258106.11
ENST00000394111.6
3UTR-3UTR CCA 90 bp CCAGGCCTCAGCCAGCCCATTGCTTGTCCCTCTGTCAATGGCGGCCCCGGGCTTTTGTCCCTCTGTCAATaGCGGCCCCGGGCTTCAAGC +
Preference number: 2 (lower is better)
Translates to: PGLSQPIACPSVNGGPGLLSLCQ*RPRASS
Trigger: GCTTGAAGCCCGGGGCCGCCATTGACAGAGGGACAA...AAGCCCGGGGCCGCCATTGACAGAGGGACAAGCAATGGGCTGGCTGAGGCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000258106.11
ENST00000394111.6
3UTR-3UTR TCA 90 bp CCAGGCCTCAGCCAGCCCATTGCTTGTCCCTCTGTCAATGGCGGCCCCGGGCTTCAATGCGCCACCGGTTaGTGTGATGGGAGCCCTTCT +
Preference number: 2 (lower is better)
Translates to: PGLSQPIACPSVNGGPGLQCATG*CDGSPS
Trigger: AGAAGGGCTCCCATCACATCAACCGGTGGCGCATTG...AAGCCCGGGGCCGCCATTGACAGAGGGACAAGCAATGGGCTGGCTGAGGCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394111.6
3UTR-3UTR CCA 90 bp ACTGGAACCGTCAGCCTTTGTGAATGGTGTTCCCTCCCCCAGACCCCAATCCTCGGCCAGAGTCCAGCTTaGGCCCACGCAGGGGCCTGG +
Preference number: 2 (lower is better)
Translates to: TGTVSLCEWCSLPQTPILGQSPA*AHAGAW
Trigger: CCAGGCCCCTGCGTGGGCCCAAGCTGGACTCTGGCC...GAGGATTGGGGTCTGGGGGAGGGAACACCATTCACAAAGGCTGACGGTTCCAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000258106.11
3UTR-3UTR CCA 90 bp GAGAAGGCCAAGTGGTCCCAGGCCTCAGCCAGCCCATTGCTTGTCCCTCTGTCAAGCCTGGCCAGGGAGTaGCCAGAGTCCAGCTTGGGC +
Preference number: 2 (lower is better)
Translates to: EKAKWSQASASPLLVPLSSLARE*PESSLG
Trigger: GCCCAAGCTGGACTCTGGCCACTCCCTGGCCAGGCT...TGACAGAGGGACAAGCAATGGGCTGGCTGAGGCCTGGGACCACTTGGCCTTCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258106.11
ENST00000394111.6
3UTR-3UTR GCA 90 bp GCTTGTCCCTCTGTCAATGGCGGCCCCGGGCTTCAAGCCCTGTGGGGCCATGACCAGCAAGCAGCACTCTaGCCTCGTGGGTTTGTGGTT +
Preference number: 2 (lower is better)
Translates to: ACPSVNGGPGLQALWGHDQQAAL*PRGFVV
Trigger: AACCACAAACCCACGAGGGCAGAGTGCTGCTTGCTG...GTCATGGCCCCACAGGGCTTGAAGCCCGGGGCCGCCATTGACAGAGGGACAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258106.11
ENST00000394111.6
3UTR-3UTR CCA 90 bp AGCAGCAAGCAGCACTCTGCCCTCGTGGGTTTGTGGTTGCCCACCCTAGTCATTGCCCACGCAGGGGCCTaGCCAGCAGCAAGCAGCACT +
Preference number: 2 (lower is better)
Translates to: SSKQHSALVGLWLPTLVIAHAGA*PAASST
Trigger: AGTGCTGCTTGCTGCTGGCCAGGCCCCTGCGTGGGC...AATGACTAGGGTGGGCAACCACAAACCCACGAGGGCAGAGTGCTGCTTGCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394111.6
3UTR-3UTR CCA 90 bp GCTTGTCCCTCTGTCAATGGCGGCCCCGGGCTTCAAGCCCTGTGGGGCCATGACGCCCTCGTGGGTTTGTaGTTGCCCACCCTAGTCATT +
Preference number: 2 (lower is better)
Translates to: ACPSVNGGPGLQALWGHDALVGL*LPTLVI
Trigger: AATGACTAGGGTGGGCAACCACAAACCCACGAGGGC...GTCATGGCCCCACAGGGCTTGAAGCCCGGGGCCGCCATTGACAGAGGGACAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394111.6
3UTR-3UTR TCA 90 bp AGCCTTAAGCCCTGTCTCTGCAGTCTCAACCTGCCCAGCGGTTCTCCAAGGACAAGCCCTGTGGGGCCATaGCTCCAGGCCTCCCCAAAG +
Preference number: 2 (lower is better)
Translates to: SLKPCLCSLNLPSGSPRTSPVGP*LQASPK
Trigger: CTTTGGGGAGGCCTGGAGTCATGGCCCCACAGGGCT...TGTCCTTGGAGAACCGCTGGGCAGGTTGAGACTGCAGAGACAGGGCTTAAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258106.11
3UTR-3UTR TCA 90 bp ATTGCTTGTCCCTCTGTCAATGGCGGCCCCGGGCTTCAAGCCCTGTGGGGCCATCGCCACCGGTTGATGTaGTGGGAGCCCTTCTTCTTC +
Preference number: 2 (lower is better)
Translates to: IACPSVNGGPGLQALWGHRHRLM*WEPFFF
Trigger: GAAGAAGAAGGGCTCCCATCACATCAACCGGTGGCG...ATGGCCCCACAGGGCTTGAAGCCCGGGGCCGCCATTGACAGAGGGACAAGCAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394111.6
3UTR-3UTR TCA 90 bp GCCCATTGCTTGTCCCTCTGTCAATGGCGGCCCCGGGCTTCAAGCCCTGTGGGGCCTAGTCATTGGAGGTaGCATCGATGTCCTCCCCAT +
Preference number: 2 (lower is better)
Translates to: AHCLSLCQWRPRASSPVGPSHWR*HRCPPH
Trigger: ATGGGGAGGACATCGATGTCACCTCCAATGACTAGG...CCCCACAGGGCTTGAAGCCCGGGGCCGCCATTGACAGAGGGACAAGCAATGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394111.6
3UTR-3UTR GCA 90 bp ATTGCTTGTCCCTCTGTCAATGGCGGCCCCGGGCTTCAAGCCCTGTGGGGCCATCAGCAAGCAGCACTCTaGCCTCGTGGGTTTGTGGTT +
Preference number: 2 (lower is better)
Translates to: IACPSVNGGPGLQALWGHQQAAL*PRGFVV
Trigger: AACCACAAACCCACGAGGGCAGAGTGCTGCTTGCTG...ATGGCCCCACAGGGCTTGAAGCCCGGGGCCGCCATTGACAGAGGGACAAGCAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258106.11
ENST00000394111.6
3UTR-3UTR GCA 90 bp AGCCTTAAGCCCTGTCTCTGCAGTCTCAACCTGCCCAGCGGTTCTCCAAGGACAGGCCCTGAACGCGTTTaGTCTACCAGCCCCCACTGG +
Preference number: 2 (lower is better)
Translates to: SLKPCLCSLNLPSGSPRTGPERV*STSPHW
Trigger: CCAGTGGGGGCTGGTAGAGCAAACGCGTTCAGGGCC...TGTCCTTGGAGAACCGCTGGGCAGGTTGAGACTGCAGAGACAGGGCTTAAGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000258106.11
3UTR-3UTR CCA 90 bp TCTGCAGTCTCAACCTGCCCAGCGGTTCTCCAAGGACAGGTGAGCATCCTGGTGTTGTCCCTCTGTCAATaGCGGCCCCGGGCTTCAAGC +
Preference number: 2 (lower is better)
Translates to: SAVSTCPAVLQGQVSILVLSLCQ*RPRASS
Trigger: GCTTGAAGCCCGGGGCCGCCATTGACAGAGGGACAA...CACCAGGATGCTCACCTGTCCTTGGAGAACCGCTGGGCAGGTTGAGACTGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258106.11
3UTR-3UTR CCA 90 bp GAGAAGGCCAAGTGGTCCCAGGCCTCAGCCAGCCCATTGCTTGTCCCTCTGTCACGATGTCCTCCCCATTaGCCTGCTTCGTGGCAATGC +
Preference number: 2 (lower is better)
Translates to: EKAKWSQASASPLLVPLSRCPPH*PASWQC
Trigger: GCATTGCCACGAAGCAGGCCAATGGGGAGGACATCG...TGACAGAGGGACAAGCAATGGGCTGGCTGAGGCCTGGGACCACTTGGCCTTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394111.6
3UTR-3UTR GCA 90 bp GAGAAGGCCAAGTGGTCCCAGGCCTCAGCCAGCCCATTGCTTGTCCCTCTGTCACCTCAGCCAGCCCATTaGTTGTCCCTCTGTCAATGG +
Preference number: 2 (lower is better)
Translates to: EKAKWSQASASPLLVPLSPQPAH*LSLCQW
Trigger: CCATTGACAGAGGGACAAGCAATGGGCTGGCTGAGG...TGACAGAGGGACAAGCAATGGGCTGGCTGAGGCCTGGGACCACTTGGCCTTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258106.11
ENST00000394111.6
3UTR-3UTR CCA 90 bp TTCGGACTGGAACCGTCAGCCTTTGTGAATGGTGTTCCCTCCCCCAGACCCCAATCTACCAGCCCCCACTaGCCCTCAGAGCCGGAATCT +
Preference number: 2 (lower is better)
Translates to: FGLEPSAFVNGVPSPRPQSTSPH*PSEPES
Trigger: AGATTCCGGCTCTGAGGGCCAGTGGGGGCTGGTAGA...TTGGGGTCTGGGGGAGGGAACACCATTCACAAAGGCTGACGGTTCCAGTCCGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000258106.11
3UTR-3UTR GCA 90 bp TCTGCAGTCTCAACCTGCCCAGCGGTTCTCCAAGGACAGGTGAGCATCCTGGTGCCTCAGCCAGCCCATTaGTTGTCCCTCTGTCAATGG +
Preference number: 2 (lower is better)
Translates to: SAVSTCPAVLQGQVSILVPQPAH*LSLCQW
Trigger: CCATTGACAGAGGGACAAGCAATGGGCTGGCTGAGG...CACCAGGATGCTCACCTGTCCTTGGAGAACCGCTGGGCAGGTTGAGACTGCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258106.11
3UTR-3UTR CCA 90 bp TCTCAATACGTTAAGAAAGACCTGGGCCTGTCCTCCCTCAAGATACAGGATGGCGAGGAGAAGGCCAAGTaGTCCCAGGCCTCAGCCAGC +
Preference number: 2 (lower is better)
Translates to: SQYVKKDLGLSSLKIQDGEEKAK*SQASAS
Trigger: GCTGGCTGAGGCCTGGGACCACTTGGCCTTCTCCTC...GCCATCCTGTATCTTGAGGGAGGACAGGCCCAGGTCTTTCTTAACGTATTGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258106.11
3UTR-3UTR CCA 90 bp GAAAGACCTGGGCCTGTCCTCCCTCAAGATACAGGATGGCCCTTCCCTATGTCTCTCTGGGGCTGGAGCTaGATGCCCGTGTCATTAAGA +
Preference number: 2 (lower is better)
Translates to: ERPGPVLPQDTGWPFPMSLWGWS*MPVSLR
Trigger: TCTTAATGACACGGGCATCCAGCTCCAGCCCCAGAG...AGACATAGGGAAGGGCCATCCTGTATCTTGAGGGAGGACAGGCCCAGGTCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258106.11
3UTR-3UTR CCA 90 bp CCTCAACTGGAGAAGCCACCAGAGTCTCTAGGCAGAGGGAAGCACTCTCCCTCTAGGGAAGGGGGACACTaGGGATCACTAAACTACAGT +
Preference number: 2 (lower is better)
Translates to: PQLEKPPESLGRGKHSPSREGGH*GSLNYS
Trigger: ACTGTAGTTTAGTGATCCCCAGTGTCCCCCTTCCCT...AGAGGGAGAGTGCTTCCCTCTGCCTAGAGACTCTGGTGGCTTCTCCAGTTGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000258106.11
3UTR-3UTR CCA 90 bp AGCCTTAAGCCCTGTCTCTGCAGTCTCAACCTGCCCAGCGGTTCTCCAAGGACACCTCAAGATACAGGATaGCCCTTCCCTATGTCTAGC +
Preference number: 2 (lower is better)
Translates to: SLKPCLCSLNLPSGSPRTPQDTG*PFPMSS
Trigger: GCTAGACATAGGGAAGGGCCATCCTGTATCTTGAGG...TGTCCTTGGAGAACCGCTGGGCAGGTTGAGACTGCAGAGACAGGGCTTAAGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258106.11
3UTR CCA 72 bp CCAGGCCCTGAACGCGTTTGCTCTACCAGCCCCCACTaGCCCTCAGAGCCGGAATCTACCACCCCAGGCTCT +
Preference number: 3 (lower is better)
Translates to: PGPERVCSTSPH*PSEPESTTPGS
Trigger: AGAGCCTGGGGTGGTAGATTCCGGCTCTGAGGGCCAGTGGGGGCTGGTAGAGCAAACGCGTTCAGGGCCTGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000258106.11
3UTR-3UTR CAA 90 bp GCTTGTCCCTCTGTCAATGGCGGCCCCGGGCTTCAAGCCCTGTGGGGCCATGACCAGCCAGCCCATTGCTaGTCCCTCTGTCAATGGCGG +
Preference number: 3 (lower is better)
Translates to: ACPSVNGGPGLQALWGHDQPAHC*SLCQWR
Trigger: CCGCCATTGACAGAGGGACAAGCAATGGGCTGGCTG...GTCATGGCCCCACAGGGCTTGAAGCCCGGGGCCGCCATTGACAGAGGGACAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258106.11
ENST00000394111.6
3UTR-3UTR CAA 90 bp TTCGGACTGGAACCGTCAGCCTTTGTGAATGGTGTTCCCTCCCCCAGACCCCAATGGCCAGAGTCCAGCTaGGGCCCACGCAGGGGCCTG +
Preference number: 3 (lower is better)
Translates to: FGLEPSAFVNGVPSPRPQWPESS*GPRRGL
Trigger: CAGGCCCCTGCGTGGGCCCAAGCTGGACTCTGGCCA...TTGGGGTCTGGGGGAGGGAACACCATTCACAAAGGCTGACGGTTCCAGTCCGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000258106.11
3UTR-3UTR CAA 90 bp AGCAAGCAGCACTCTGCCCTCGTGGGTTTGTGGTTGCCCACCCTAGTCATTGGATGGCCAGAGTCCAGCTaGGGCCCACGCAGGGGCCTG +
Preference number: 3 (lower is better)
Translates to: SKQHSALVGLWLPTLVIGWPESS*GPRRGL
Trigger: CAGGCCCCTGCGTGGGCCCAAGCTGGACTCTGGCCA...TCCAATGACTAGGGTGGGCAACCACAAACCCACGAGGGCAGAGTGCTGCTTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394111.6
3UTR-3UTR CAA 90 bp CCAGGCCTCAGCCAGCCCATTGCTTGTCCCTCTGTCAATGGCGGCCCCGGGCTTTCGATGTCCTCCCCATaGGCCTGCTTCGTGGCAATG +
Preference number: 3 (lower is better)
Translates to: PGLSQPIACPSVNGGPGLSMSSP*ACFVAM
Trigger: CATTGCCACGAAGCAGGCCAATGGGGAGGACATCGA...AAGCCCGGGGCCGCCATTGACAGAGGGACAAGCAATGGGCTGGCTGAGGCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394111.6
3UTR-3UTR CAA 90 bp CCTCAGCCAGCCCATTGCTTGTCCCTCTGTCAATGGCGGCCCCGGGCTTCAAGCTCTGCCCTCGTGGGTTaGTGGTTGCCCACCCTAGTC +
Preference number: 3 (lower is better)
Translates to: PQPAHCLSLCQWRPRASSSALVG*WLPTLV
Trigger: GACTAGGGTGGGCAACCACAAACCCACGAGGGCAGA...GCTTGAAGCCCGGGGCCGCCATTGACAGAGGGACAAGCAATGGGCTGGCTGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394111.6
3UTR TCA 72 bp GGGCCCACGACTTCGGACTGGAACCGTCAGCCTTTGTaGATGGTGTTCCCTCCCCCAGACCCCAATCCTCCC +
Preference number: 3 (lower is better)
Translates to: GPTTSDWNRQPL*MVFPPPDPNPP
Trigger: GGGAGGATTGGGGTCTGGGGGAGGGAACACCATTCACAAAGGCTGACGGTTCCAGTCCGAAGTCGTGGGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000258106.11
3UTR-3UTR CAA 90 bp ACAGGTGAGCATCCTGGTGGGCCCACGACTTCGGACTGGAACCGTCAGCCTTTGCAGCCAGCCCATTGCTaGTCCCTCTGTCAATGGCGG +
Preference number: 3 (lower is better)
Translates to: TGEHPGGPTTSDWNRQPLQPAHC*SLCQWR
Trigger: CCGCCATTGACAGAGGGACAAGCAATGGGCTGGCTG...CAAAGGCTGACGGTTCCAGTCCGAAGTCGTGGGCCCACCAGGATGCTCACCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258106.11
3UTR GCA 72 bp GGGACTGGTTGCAGGCTCAGCCTTAAGCCCTGTCTCTaGAGTCTCAACCTGCCCAGCGGTTCTCCAAGGACA +
Preference number: 3 (lower is better)
Translates to: GTGCRLSLKPCL*SLNLPSGSPRT
Trigger: TGTCCTTGGAGAACCGCTGGGCAGGTTGAGACTGCAGAGACAGGGCTTAAGGCTGAGCCTGCAACCAGTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258106.11
3UTR CCA 72 bp CTCAGAGCCGGAATCTACCACCCCAGGCTCTGGGGCTaGAGCTGGATGCCCGTGTCATTAAGAGAGAGACTT +
Preference number: 3 (lower is better)
Translates to: LRAGIYHPRLWG*SWMPVSLRERL
Trigger: AAGTCTCTCTCTTAATGACACGGGCATCCAGCTCCAGCCCCAGAGCCTGGGGTGGTAGATTCCGGCTCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258106.11
3UTR CCA 72 bp GCCAGCAGCAAGCAGCACTCTGCCCTCGTGGGTTTGTaGTTGCCCACCCTAGTCATTGGAGGTGACATCGAT +
Preference number: 3 (lower is better)
Translates to: ASSKQHSALVGL*LPTLVIGGDID
Trigger: ATCGATGTCACCTCCAATGACTAGGGTGGGCAACCACAAACCCACGAGGGCAGAGTGCTGCTTGCTGCTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394111.6
3UTR-3UTR CAA 90 bp GAAAGACCTGGGCCTGTCCTCCCTCAAGATACAGGATGGCCCTTCCCTATGTCTGCCTCAGCCAGCCCATaGCTTGTCCCTCTGTCAATG +
Preference number: 3 (lower is better)
Translates to: ERPGPVLPQDTGWPFPMSASASP*LVPLSM
Trigger: CATTGACAGAGGGACAAGCAATGGGCTGGCTGAGGC...AGACATAGGGAAGGGCCATCCTGTATCTTGAGGGAGGACAGGCCCAGGTCTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258106.11
3UTR-3UTR CAA 90 bp ACAGGTGAGCATCCTGGTGGGCCCACGACTTCGGACTGGAACCGTCAGCCTTTGAAAACAAAAGGGAGATaGGAGACACGGAGAGCAGCT +
Preference number: 3 (lower is better)
Translates to: TGEHPGGPTTSDWNRQPLKTKGR*ETRRAA
Trigger: AGCTGCTCTCCGTGTCTCCAATCTCCCTTTTGTTTT...CAAAGGCTGACGGTTCCAGTCCGAAGTCGTGGGCCCACCAGGATGCTCACCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258106.11
3UTR-3UTR CAA 90 bp CACGACTTCGGACTGGAACCGTCAGCCTTTGTGAATGGTGTTCCCTCCCCCAGAGTTAATGAATTACCCTaGACCCCCTCCACCAGTACC +
Preference number: 3 (lower is better)
Translates to: HDFGLEPSAFVNGVPSPRVNELP*TPSTST
Trigger: GGTACTGGTGGAGGGGGTCAAGGGTAATTCATTAAC...TCTGGGGGAGGGAACACCATTCACAAAGGCTGACGGTTCCAGTCCGAAGTCGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000258106.11
CDS-3UTR GCA 90 bp CCAGGCCTCAGCCAGCCCATTGCTTGTCCCTCTGTCAATGGCGGCCCCGGGCTTCTGGCGCCGCCGCCTTaGGGGGTGTGCACCCAGCCA +
Preference number: 4 (lower is better)
Translates to: PGLSQPIACPSVNGGPGLLAPPP*GVCTQP
Trigger: TGGCTGGGTGCACACCCCGCAAGGCGGCGGCGCCAG...AAGCCCGGGGCCGCCATTGACAGAGGGACAAGCAATGGGCTGGCTGAGGCCTGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000258106.11
CDS-3UTR GCA 90 bp GCCCATTGCTTGTCCCTCTGTCAATGGCGGCCCCGGGCTTCAAGCCCTGTGGGGCAGCCGCGGGAGCTGTaGGAGGCAGCCGGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: AHCLSLCQWRPRASSPVGQPREL*EAAGLW
Trigger: CCAGAGCCCGGCTGCCTCGCACAGCTCCCGCGGCTG...CCCCACAGGGCTTGAAGCCCGGGGCCGCCATTGACAGAGGGACAAGCAATGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258106.11
CDS-3UTR GCA 90 bp CCAGGCCTCAGCCAGCCCATTGCTTGTCCCTCTGTCAATGGCGGCCCCGGGCTTGAGGCGCCCAGCTGGTaGGCCGGATGCACGGTCAGC +
Preference number: 4 (lower is better)
Translates to: PGLSQPIACPSVNGGPGLEAPSW*AGCTVS
Trigger: GCTGACCGTGCATCCGGCGCACCAGCTGGGCGCCTC...AAGCCCGGGGCCGCCATTGACAGAGGGACAAGCAATGGGCTGGCTGAGGCCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258106.11
CDS-3UTR GCA 90 bp GCCCATTGCTTGTCCCTCTGTCAATGGCGGCCCCGGGCTTCAAGCCCTGTGGGGAGACTGCCGGCCAGCTaGTTCCGCTCGGCGCCCACC +
Preference number: 4 (lower is better)
Translates to: AHCLSLCQWRPRASSPVGRLPAS*FRSAPT
Trigger: GGTGGGCGCCGAGCGGAAGCAGCTGGCCGGCAGTCT...CCCCACAGGGCTTGAAGCCCGGGGCCGCCATTGACAGAGGGACAAGCAATGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258106.11
ENST00000394111.6
CDS-3UTR CCA 90 bp GCCCATTGCTTGTCCCTCTGTCAATGGCGGCCCCGGGCTTCAAGCCCTGTGGGGGGCCAGAGTCCAGCTTaGGCCCACGCAGGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: AHCLSLCQWRPRASSPVGGQSPA*AHAGAW
Trigger: CCAGGCCCCTGCGTGGGCCCAAGCTGGACTCTGGCC...CCCCACAGGGCTTGAAGCCCGGGGCCGCCATTGACAGAGGGACAAGCAATGGGC
69% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000258106.11
ENST00000394111.6
CDS-3UTR CCA 90 bp GCTTGTCCCTCTGTCAATGGCGGCCCCGGGCTTCAAGCCCTGTGGGGCCATGACGACACGGAGAGCAGCTaGGAGGCTGCGGTGGCGGGC +
Preference number: 4 (lower is better)
Translates to: ACPSVNGGPGLQALWGHDDTESS*EAAVAG
Trigger: GCCCGCCACCGCAGCCTCCCAGCTGCTCTCCGTGTC...GTCATGGCCCCACAGGGCTTGAAGCCCGGGGCCGCCATTGACAGAGGGACAAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258106.11
ENST00000394111.6
CDS-3UTR TCA 90 bp GCCCATTGCTTGTCCCTCTGTCAATGGCGGCCCCGGGCTTCAAGCCCTGTGGGGTCCATTCTAGCGGCCTaGGCGCTGCCTGGGCGCGCA +
Preference number: 4 (lower is better)
Translates to: AHCLSLCQWRPRASSPVGSILAA*ALPGRA
Trigger: TGCGCGCCCAGGCAGCGCTCAGGCCGCTAGAATGGA...CCCCACAGGGCTTGAAGCCCGGGGCCGCCATTGACAGAGGGACAAGCAATGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394111.6
CDS-3UTR GCA 90 bp CCAGGCCTCAGCCAGCCCATTGCTTGTCCCTCTGTCAATGGCGGCCCCGGGCTTTCCAGCCGCAGCAGCTaGGAGGGCGAGAAGGCCGTG +
Preference number: 4 (lower is better)
Translates to: PGLSQPIACPSVNGGPGLSSRSS*EGEKAV
Trigger: CACGGCCTTCTCGCCCTCGCAGCTGCTGCGGCTGGA...AAGCCCGGGGCCGCCATTGACAGAGGGACAAGCAATGGGCTGGCTGAGGCCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258106.11
ENST00000394111.6
CDS-3UTR CCA 90 bp CCAGGCCTCAGCCAGCCCATTGCTTGTCCCTCTGTCAATGGCGGCCCCGGGCTTGGCCTGAGCGCTGCCTaGGCGCGCAGATCTGGGTTG +
Preference number: 4 (lower is better)
Translates to: PGLSQPIACPSVNGGPGLGLSAA*ARRSGL
Trigger: CAACCCAGATCTGCGCGCCCAGGCAGCGCTCAGGCC...AAGCCCGGGGCCGCCATTGACAGAGGGACAAGCAATGGGCTGGCTGAGGCCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394111.6
CDS-3UTR CCA 90 bp CCTCAGCCAGCCCATTGCTTGTCCCTCTGTCAATGGCGGCCCCGGGCTTCAAGCGGGGAGGCTGGGACCTaGACCTTGCCGGCGCACTGC +
Preference number: 4 (lower is better)
Translates to: PQPAHCLSLCQWRPRASSGEAGT*TLPAHC
Trigger: GCAGTGCGCCGGCAAGGTCCAGGTCCCAGCCTCCCC...GCTTGAAGCCCGGGGCCGCCATTGACAGAGGGACAAGCAATGGGCTGGCTGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394111.6
CDS-3UTR TCA 90 bp CCAGGCCTCAGCCAGCCCATTGCTTGTCCCTCTGTCAATGGCGGCCCCGGGCTTCCCCCTCGCCTTCTCTaGGGCTCTGGGGGCTCAAGT +
Preference number: 4 (lower is better)
Translates to: PGLSQPIACPSVNGGPGLPPRLL*GSGGSS
Trigger: ACTTGAGCCCCCAGAGCCTCAGAGAAGGCGAGGGGG...AAGCCCGGGGCCGCCATTGACAGAGGGACAAGCAATGGGCTGGCTGAGGCCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000394111.6
CDS-3UTR GCA 90 bp CCAGGCCTCAGCCAGCCCATTGCTTGTCCCTCTGTCAATGGCGGCCCCGGGCTTCCGCTTGGGCTTGCGTaGGAAGGGGCCGTGCAGAAG +
Preference number: 4 (lower is better)
Translates to: PGLSQPIACPSVNGGPGLPLGLA*EGAVQK
Trigger: CTTCTGCACGGCCCCTTCGCACGCAAGCCCAAGCGG...AAGCCCGGGGCCGCCATTGACAGAGGGACAAGCAATGGGCTGGCTGAGGCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258106.11
ENST00000394111.6
CDS-3UTR GCA 90 bp CCTCAGCCAGCCCATTGCTTGTCCCTCTGTCAATGGCGGCCCCGGGCTTCAAGCCTGGGACCTGGACCTTaGCGGCGCACTGCGGAGAGG +
Preference number: 4 (lower is better)
Translates to: PQPAHCLSLCQWRPRASSLGPGP*RRTAER
Trigger: CCTCTCCGCAGTGCGCCGGCAAGGTCCAGGTCCCAG...GCTTGAAGCCCGGGGCCGCCATTGACAGAGGGACAAGCAATGGGCTGGCTGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394111.6
CDS-3UTR CCA 90 bp GCCCATTGCTTGTCCCTCTGTCAATGGCGGCCCCGGGCTTCAAGCCCTGTGGGGAGCCTGGCCAGGGAGTaGCCAGAGTCCAGCTTGGGC +
Preference number: 4 (lower is better)
Translates to: AHCLSLCQWRPRASSPVGSLARE*PESSLG
Trigger: GCCCAAGCTGGACTCTGGCCACTCCCTGGCCAGGCT...CCCCACAGGGCTTGAAGCCCGGGGCCGCCATTGACAGAGGGACAAGCAATGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258106.11
ENST00000394111.6
CDS-3UTR CCA 90 bp GCTTGTCCCTCTGTCAATGGCGGCCCCGGGCTTCAAGCCCTGTGGGGCCATGACAGAAGCAGCCCGTCCTaGGGCACGTCGCTGGCATCG +
Preference number: 4 (lower is better)
Translates to: ACPSVNGGPGLQALWGHDRSSPS*GTSLAS
Trigger: CGATGCCAGCGACGTGCCCCAGGACGGGCTGCTTCT...GTCATGGCCCCACAGGGCTTGAAGCCCGGGGCCGCCATTGACAGAGGGACAAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394111.6
CDS-3UTR TCA 90 bp CCAGGCCTCAGCCAGCCCATTGCTTGTCCCTCTGTCAATGGCGGCCCCGGGCTTTCCTGGGCCGCGGTCTaGAGCTGCGACCTTGTTCCT +
Preference number: 4 (lower is better)
Translates to: PGLSQPIACPSVNGGPGLSWAAV*SCDLVP
Trigger: AGGAACAAGGTCGCAGCTTCAGACCGCGGCCCAGGA...AAGCCCGGGGCCGCCATTGACAGAGGGACAAGCAATGGGCTGGCTGAGGCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394111.6
CDS-3UTR GCA 90 bp CCTCAGCCAGCCCATTGCTTGTCCCTCTGTCAATGGCGGCCCCGGGCTTCAAGCGGATCCGCTTGGGCTTaGGTGCGAAGGGGCCGTGCA +
Preference number: 4 (lower is better)
Translates to: PQPAHCLSLCQWRPRASSGSAWA*VRRGRA
Trigger: TGCACGGCCCCTTCGCACGCAAGCCCAAGCGGATCC...GCTTGAAGCCCGGGGCCGCCATTGACAGAGGGACAAGCAATGGGCTGGCTGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258106.11
ENST00000394111.6
CDS-3UTR CCA 90 bp TCTGCAGTCTCAACCTGCCCAGCGGTTCTCCAAGGACAGGTGAGCATCCTGGTGGAGGCAGCCGGGCTCTaGGGAGCGCTCCGCGTCCTG +
Preference number: 4 (lower is better)
Translates to: SAVSTCPAVLQGQVSILVEAAGL*GALRVL
Trigger: CAGGACGCGGAGCGCTCCCCAGAGCCCGGCTGCCTC...CACCAGGATGCTCACCTGTCCTTGGAGAACCGCTGGGCAGGTTGAGACTGCAGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258106.11
CDS-3UTR CCA 90 bp TCTGCAGTCTCAACCTGCCCAGCGGTTCTCCAAGGACAGGTGAGCATCCTGGTGGGGGAGGCGCCCAGCTaGTGCGCCGGATGCACGGTC +
Preference number: 4 (lower is better)
Translates to: SAVSTCPAVLQGQVSILVGEAPS*CAGCTV
Trigger: GACCGTGCATCCGGCGCACCAGCTGGGCGCCTCCCC...CACCAGGATGCTCACCTGTCCTTGGAGAACCGCTGGGCAGGTTGAGACTGCAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000258106.11
CDS-3UTR CCA 90 bp ACAGGTGAGCATCCTGGTGGGCCCACGACTTCGGACTGGAACCGTCAGCCTTTGGGCCAGAGTCCAGCTTaGGCCCACGCAGGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: TGEHPGGPTTSDWNRQPLGQSPA*AHAGAW
Trigger: CCAGGCCCCTGCGTGGGCCCAAGCTGGACTCTGGCC...CAAAGGCTGACGGTTCCAGTCCGAAGTCGTGGGCCCACCAGGATGCTCACCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258106.11
CDS-3UTR CCA 90 bp GCTTGTCCCTCTGTCAATGGCGGCCCCGGGCTTCAAGCCCTGTGGGGCCATGACCCTTCTCTGAGGCTCTaGGGGCTCAAGTGTCGGCGG +
Preference number: 4 (lower is better)
Translates to: ACPSVNGGPGLQALWGHDPSLRL*GLKCRR
Trigger: CCGCCGACACTTGAGCCCCCAGAGCCTCAGAGAAGG...GTCATGGCCCCACAGGGCTTGAAGCCCGGGGCCGCCATTGACAGAGGGACAAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394111.6
CDS-3UTR CCA 90 bp CCAGGCCTCAGCCAGCCCATTGCTTGTCCCTCTGTCAATGGCGGCCCCGGGCTTAGCTGTTCGCGGGGCTaGAAGCAGCTCCAGTGCCCA +
Preference number: 4 (lower is better)
Translates to: PGLSQPIACPSVNGGPGLSCSRG*KQLQCP
Trigger: TGGGCACTGGAGCTGCTTCCAGCCCCGCGAACAGCT...AAGCCCGGGGCCGCCATTGACAGAGGGACAAGCAATGGGCTGGCTGAGGCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394111.6
CDS-3UTR TCA 90 bp GAGAAGGCCAAGTGGTCCCAGGCCTCAGCCAGCCCATTGCTTGTCCCTCTGTCAGCGTCTCGGAGAGGCTaGGACTGCCGGCCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: EKAKWSQASASPLLVPLSASRRG*DCRPAA
Trigger: AGCAGCTGGCCGGCAGTCTCAGCCTCTCCGAGACGC...TGACAGAGGGACAAGCAATGGGCTGGCTGAGGCCTGGGACCACTTGGCCTTCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258106.11
ENST00000394111.6
CDS-3UTR TCA 90 bp AGCAGCAAGCAGCACTCTGCCCTCGTGGGTTTGTGGTTGCCCACCCTAGTCATTCTGGGTTGGGCCTCCTaGCGCCCCAAGGCCACGGGG +
Preference number: 4 (lower is better)
Translates to: SSKQHSALVGLWLPTLVILGWAS*RPKATG
Trigger: CCCCGTGGCCTTGGGGCGTCAGGAGGCCCAACCCAG...AATGACTAGGGTGGGCAACCACAAACCCACGAGGGCAGAGTGCTGCTTGCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394111.6
CDS-3UTR GCA 90 bp AGCCTTAAGCCCTGTCTCTGCAGTCTCAACCTGCCCAGCGGTTCTCCAAGGACACAGTGCCCCCGCCGGTaGCGCCGTCCTTGGCCACCA +
Preference number: 4 (lower is better)
Translates to: SLKPCLCSLNLPSGSPRTQCPRR*RRPWPP
Trigger: TGGTGGCCAAGGACGGCGGCACCGGCGGGGGCACTG...TGTCCTTGGAGAACCGCTGGGCAGGTTGAGACTGCAGAGACAGGGCTTAAGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000258106.11
CDS-3UTR GCA 90 bp CACGACTTCGGACTGGAACCGTCAGCCTTTGTGAATGGTGTTCCCTCCCCCAGAAAGGAGTGCGGGGGCTaGAGCGGGGAGGCGCCCAGC +
Preference number: 4 (lower is better)
Translates to: HDFGLEPSAFVNGVPSPRKECGG*SGEAPS
Trigger: GCTGGGCGCCTCCCCGCTGCAGCCCCCGCACTCCTT...TCTGGGGGAGGGAACACCATTCACAAAGGCTGACGGTTCCAGTCCGAAGTCGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000258106.11
CDS-3UTR GCA 90 bp GAGAAGGCCAAGTGGTCCCAGGCCTCAGCCAGCCCATTGCTTGTCCCTCTGTCACGTGCGAAGGGGCCGTaGAGAAGCAGCCCGTCCTGG +
Preference number: 4 (lower is better)
Translates to: EKAKWSQASASPLLVPLSRAKGP*RSSPSW
Trigger: CCAGGACGGGCTGCTTCTGCACGGCCCCTTCGCACG...TGACAGAGGGACAAGCAATGGGCTGGCTGAGGCCTGGGACCACTTGGCCTTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258106.11
ENST00000394111.6
CDS-3UTR GCA 90 bp ATTGCTTGTCCCTCTGTCAATGGCGGCCCCGGGCTTCAAGCCCTGTGGGGCCATCCGCTTGGGCTTGCGTaGGAAGGGGCCGTGCAGAAG +
Preference number: 4 (lower is better)
Translates to: IACPSVNGGPGLQALWGHPLGLA*EGAVQK
Trigger: CTTCTGCACGGCCCCTTCGCACGCAAGCCCAAGCGG...ATGGCCCCACAGGGCTTGAAGCCCGGGGCCGCCATTGACAGAGGGACAAGCAAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000258106.11
ENST00000394111.6
CDS-3UTR CCA 90 bp CCAGGCCTCAGCCAGCCCATTGCTTGTCCCTCTGTCAATGGCGGCCCCGGGCTTAGCACTCTGCCCTCGTaGGTTTGTGGTTGCCCACCC +
Preference number: 4 (lower is better)
Translates to: PGLSQPIACPSVNGGPGLSTLPS*VCGCPP
Trigger: GGGTGGGCAACCACAAACCCACGAGGGCAGAGTGCT...AAGCCCGGGGCCGCCATTGACAGAGGGACAAGCAATGGGCTGGCTGAGGCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258106.11
ENST00000394111.6
CDS-3UTR CCA 90 bp GAGAAGGCCAAGTGGTCCCAGGCCTCAGCCAGCCCATTGCTTGTCCCTCTGTCAGCCCACGCAGGGGCCTaGCCAGCAGCAAGCAGCACT +
Preference number: 4 (lower is better)
Translates to: EKAKWSQASASPLLVPLSAHAGA*PAASST
Trigger: AGTGCTGCTTGCTGCTGGCCAGGCCCCTGCGTGGGC...TGACAGAGGGACAAGCAATGGGCTGGCTGAGGCCTGGGACCACTTGGCCTTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258106.11
ENST00000394111.6
CDS-3UTR CCA 90 bp ATTGCTTGTCCCTCTGTCAATGGCGGCCCCGGGCTTCAAGCCCTGTGGGGCCATGGCCTCCCCAAAGCCTaGCCAGGGAGTGGCCAGAGT +
Preference number: 4 (lower is better)
Translates to: IACPSVNGGPGLQALWGHGLPKA*PGSGQS
Trigger: ACTCTGGCCACTCCCTGGCCAGGCTTTGGGGAGGCC...ATGGCCCCACAGGGCTTGAAGCCCGGGGCCGCCATTGACAGAGGGACAAGCAAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000258106.11
ENST00000394111.6
CDS-3UTR CCA 90 bp CCTCAGCCAGCCCATTGCTTGTCCCTCTGTCAATGGCGGCCCCGGGCTTCAAGCGAGGAGAAGGCCAAGTaGTCCCAGGCCTCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: PQPAHCLSLCQWRPRASSEEKAK*SQASAS
Trigger: GCTGGCTGAGGCCTGGGACCACTTGGCCTTCTCCTC...GCTTGAAGCCCGGGGCCGCCATTGACAGAGGGACAAGCAATGGGCTGGCTGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258106.11
ENST00000394111.6
CDS-3UTR CCA 90 bp TGGTTGCCCACCCTAGTCATTGGAGGTGACATCGATGTCCTCCCCATTGGCCTGCGGCGGTGGGGAGGCTaGGACCTGGACCTTGCCGGC +
Preference number: 4 (lower is better)
Translates to: WLPTLVIGGDIDVLPIGLRRWGG*DLDLAG
Trigger: GCCGGCAAGGTCCAGGTCCCAGCCTCCCCACCGCCG...CAGGCCAATGGGGAGGACATCGATGTCACCTCCAATGACTAGGGTGGGCAACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394111.6
CDS-3UTR CCA 90 bp AGCAAGCAGCACTCTGCCCTCGTGGGTTTGTGGTTGCCCACCCTAGTCATTGGAGGCGGGCCTCGGCACTaGGAGATCCACCCCCTCGCC +
Preference number: 4 (lower is better)
Translates to: SKQHSALVGLWLPTLVIGGGPRH*EIHPLA
Trigger: GGCGAGGGGGTGGATCTCCCAGTGCCGAGGCCCGCC...TCCAATGACTAGGGTGGGCAACCACAAACCCACGAGGGCAGAGTGCTGCTTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394111.6
CDS-3UTR CCA 90 bp AGCAAGCAGCACTCTGCCCTCGTGGGTTTGTGGTTGCCCACCCTAGTCATTGGAGTGCCGCGACCGGCTTaGACCAGGACGGCGGGCCTC +
Preference number: 4 (lower is better)
Translates to: SKQHSALVGLWLPTLVIGVPRPA*TRTAGL
Trigger: GAGGCCCGCCGTCCTGGTCCAAGCCGGTCGCGGCAC...TCCAATGACTAGGGTGGGCAACCACAAACCCACGAGGGCAGAGTGCTGCTTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394111.6
CDS-3UTR TCA 90 bp GCTTGTCCCTCTGTCAATGGCGGCCCCGGGCTTCAAGCCCTGTGGGGCCATGACCGCCACCGGTTGATGTaGTGGGAGCCCTTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: ACPSVNGGPGLQALWGHDRHRLM*WEPFFF
Trigger: GAAGAAGAAGGGCTCCCATCACATCAACCGGTGGCG...GTCATGGCCCCACAGGGCTTGAAGCCCGGGGCCGCCATTGACAGAGGGACAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258106.11
ENST00000394111.6
CDS-3UTR GCA 90 bp TCTCCTCAACTGGAGAAGCCACCAGAGTCTCTAGGCAGAGGGAAGCACTCTCCCAGCTGGTGCGCCGGATaGACGGTCAGCGCGGGGTGG +
Preference number: 4 (lower is better)
Translates to: SPQLEKPPESLGRGKHSPSWCAG*TVSAGW
Trigger: CCACCCCGCGCTGACCGTGCATCCGGCGCACCAGCT...GGGAGAGTGCTTCCCTCTGCCTAGAGACTCTGGTGGCTTCTCCAGTTGAGGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258106.11
CDS-3UTR GCA 90 bp AGCCTTAAGCCCTGTCTCTGCAGTCTCAACCTGCCCAGCGGTTCTCCAAGGACAAGACTGCCGGCCAGCTaGTTCCGCTCGGCGCCCACC +
Preference number: 4 (lower is better)
Translates to: SLKPCLCSLNLPSGSPRTRLPAS*FRSAPT
Trigger: GGTGGGCGCCGAGCGGAAGCAGCTGGCCGGCAGTCT...TGTCCTTGGAGAACCGCTGGGCAGGTTGAGACTGCAGAGACAGGGCTTAAGGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258106.11
CDS-3UTR CCA 90 bp CCTCAACTGGAGAAGCCACCAGAGTCTCTAGGCAGAGGGAAGCACTCTCCCTCTCTTTCGGAGTCCCGCTaGGACCGACCCCAGCCCCCG +
Preference number: 4 (lower is better)
Translates to: PQLEKPPESLGRGKHSPSLSESR*DRPQPP
Trigger: CGGGGGCTGGGGTCGGTCCCAGCGGGACTCCGAAAG...AGAGGGAGAGTGCTTCCCTCTGCCTAGAGACTCTGGTGGCTTCTCCAGTTGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000258106.11
CDS-3UTR CCA 90 bp GAGAAGGCCAAGTGGTCCCAGGCCTCAGCCAGCCCATTGCTTGTCCCTCTGTCAACGGTCAGCGCGGGGTaGTTCATGGCCTCGGGGAAC +
Preference number: 4 (lower is better)
Translates to: EKAKWSQASASPLLVPLSTVSAG*FMASGN
Trigger: GTTCCCCGAGGCCATGAACCACCCCGCGCTGACCGT...TGACAGAGGGACAAGCAATGGGCTGGCTGAGGCCTGGGACCACTTGGCCTTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258106.11
CDS-3UTR CCA 90 bp TCTGCAGTCTCAACCTGCCCAGCGGTTCTCCAAGGACAGGTGAGCATCCTGGTGAGAAGCAGCCCGTCCTaGGGCACGTCGCTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: SAVSTCPAVLQGQVSILVRSSPS*GTSLAW
Trigger: CCAGGCCAGCGACGTGCCCCAGGACGGGCTGCTTCT...CACCAGGATGCTCACCTGTCCTTGGAGAACCGCTGGGCAGGTTGAGACTGCAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258106.11
CDS-3UTR CCA 90 bp CCTCAGCCAGCCCATTGCTTGTCCCTCTGTCAATGGCGGCCCCGGGCTTCAAGCAGCACTCTGCCCTCGTaGGTTTGTGGTTGCCCACCC +
Preference number: 4 (lower is better)
Translates to: PQPAHCLSLCQWRPRASSSTLPS*VCGCPP
Trigger: GGGTGGGCAACCACAAACCCACGAGGGCAGAGTGCT...GCTTGAAGCCCGGGGCCGCCATTGACAGAGGGACAAGCAATGGGCTGGCTGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258106.11
ENST00000394111.6
CDS-3UTR CCA 90 bp AGCAGCAAGCAGCACTCTGCCCTCGTGGGTTTGTGGTTGCCCACCCTAGTCATTGACACGGAGAGCAGCTaGGAGGCTGCGGTGGCGGGC +
Preference number: 4 (lower is better)
Translates to: SSKQHSALVGLWLPTLVIDTESS*EAAVAG
Trigger: GCCCGCCACCGCAGCCTCCCAGCTGCTCTCCGTGTC...AATGACTAGGGTGGGCAACCACAAACCCACGAGGGCAGAGTGCTGCTTGCTGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394111.6
CDS-3UTR TCA 90 bp GAAAGACCTGGGCCTGTCCTCCCTCAAGATACAGGATGGCCCTTCCCTATGTCTTGGGGTGAGGGTAGTTaGGCGCCGTGGGCCGGAGCG +
Preference number: 4 (lower is better)
Translates to: ERPGPVLPQDTGWPFPMSWGEGS*APWAGA
Trigger: CGCTCCGGCCCACGGCGCTCAACTACCCTCACCCCA...AGACATAGGGAAGGGCCATCCTGTATCTTGAGGGAGGACAGGCCCAGGTCTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258106.11
CDS-3UTR TCA 90 bp AGCAGCAAGCAGCACTCTGCCCTCGTGGGTTTGTGGTTGCCCACCCTAGTCATTGCGTCTCGGAGAGGCTaGGACTGCCGGCCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: SSKQHSALVGLWLPTLVIASRRG*DCRPAA
Trigger: AGCAGCTGGCCGGCAGTCTCAGCCTCTCCGAGACGC...AATGACTAGGGTGGGCAACCACAAACCCACGAGGGCAGAGTGCTGCTTGCTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394111.6
CDS-3UTR TCA 90 bp CCTCAGCCAGCCCATTGCTTGTCCCTCTGTCAATGGCGGCCCCGGGCTTCAAGCCAATGCGCCACCGGTTaGTGTGATGGGAGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: PQPAHCLSLCQWRPRASSQCATG*CDGSPS
Trigger: AGAAGGGCTCCCATCACATCAACCGGTGGCGCATTG...GCTTGAAGCCCGGGGCCGCCATTGACAGAGGGACAAGCAATGGGCTGGCTGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258106.11
ENST00000394111.6
CDS-3UTR GCA 90 bp TCCTCAACTGGAGAAGCCACCAGAGTCTCTAGGCAGAGGGAAGCACTCTCCCTCCCGCCTTGCGGGGTGTaGACCCAGCCAGGCACATGC +
Preference number: 4 (lower is better)
Translates to: SSTGEATRVSRQREALSLPPCGV*TQPGTC
Trigger: GCATGTGCCTGGCTGGGTGCACACCCCGCAAGGCGG...GAGGGAGAGTGCTTCCCTCTGCCTAGAGACTCTGGTGGCTTCTCCAGTTGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258106.11
CDS-3UTR GCA 90 bp CACGACTTCGGACTGGAACCGTCAGCCTTTGTGAATGGTGTTCCCTCCCCCAGACGTGCGAAGGGGCCGTaGAGAAGCAGCCCGTCCTGG +
Preference number: 4 (lower is better)
Translates to: HDFGLEPSAFVNGVPSPRRAKGP*RSSPSW
Trigger: CCAGGACGGGCTGCTTCTGCACGGCCCCTTCGCACG...TCTGGGGGAGGGAACACCATTCACAAAGGCTGACGGTTCCAGTCCGAAGTCGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000258106.11
CDS-3UTR GCA 90 bp TTCGGACTGGAACCGTCAGCCTTTGTGAATGGTGTTCCCTCCCCCAGACCCCAATCCAGCCGCAGCAGCTaGGAGGGCGAGAAGGCCGTG +
Preference number: 4 (lower is better)
Translates to: FGLEPSAFVNGVPSPRPQSSRSS*EGEKAV
Trigger: CACGGCCTTCTCGCCCTCGCAGCTGCTGCGGCTGGA...TTGGGGTCTGGGGGAGGGAACACCATTCACAAAGGCTGACGGTTCCAGTCCGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000258106.11
CDS-3UTR GCA 90 bp GCTTGTCCCTCTGTCAATGGCGGCCCCGGGCTTCAAGCCCTGTGGGGCCATGACAACCACACCTTCACCTaGGTCTCGGAGAGGCTGAGA +
Preference number: 4 (lower is better)
Translates to: ACPSVNGGPGLQALWGHDNHTFT*VSERLR
Trigger: TCTCAGCCTCTCCGAGACGCAGGTGAAGGTGTGGTT...GTCATGGCCCCACAGGGCTTGAAGCCCGGGGCCGCCATTGACAGAGGGACAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258106.11
ENST00000394111.6
CDS-3UTR GCA 90 bp GCCCATTGCTTGTCCCTCTGTCAATGGCGGCCCCGGGCTTCAAGCCCTGTGGGGCCTCAGCCAGCCCATTaGTTGTCCCTCTGTCAATGG +
Preference number: 4 (lower is better)
Translates to: AHCLSLCQWRPRASSPVGPQPAH*LSLCQW
Trigger: CCATTGACAGAGGGACAAGCAATGGGCTGGCTGAGG...CCCCACAGGGCTTGAAGCCCGGGGCCGCCATTGACAGAGGGACAAGCAATGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258106.11
ENST00000394111.6
CDS-3UTR GCA 90 bp GCCCATTGCTTGTCCCTCTGTCAATGGCGGCCCCGGGCTTCAAGCCCTGTGGGGTCTGCAGTCTCAACCTaGCCAGCGGTTCTCCAAGGA +
Preference number: 4 (lower is better)
Translates to: AHCLSLCQWRPRASSPVGSAVST*PAVLQG
Trigger: TCCTTGGAGAACCGCTGGGCAGGTTGAGACTGCAGA...CCCCACAGGGCTTGAAGCCCGGGGCCGCCATTGACAGAGGGACAAGCAATGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258106.11
CDS-3UTR GCA 90 bp TGGTTGCCCACCCTAGTCATTGGAGGTGACATCGATGTCCTCCCCATTGGCCTGACCTTGCCGGCGCACTaGGGAGAGGGAGCCGCAGAG +
Preference number: 4 (lower is better)
Translates to: WLPTLVIGGDIDVLPIGLTLPAH*GEGAAE
Trigger: CTCTGCGGCTCCCTCTCCGCAGTGCGCCGGCAAGGT...CAGGCCAATGGGGAGGACATCGATGTCACCTCCAATGACTAGGGTGGGCAACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394111.6
CDS-3UTR GCA 90 bp TGGTTGCCCACCCTAGTCATTGGAGGTGACATCGATGTCCTCCCCATTGGCCTGCCGGAGCGGTCCCACTaGCACCCTCCAGCTGTTCGC +
Preference number: 4 (lower is better)
Translates to: WLPTLVIGGDIDVLPIGLPERSH*HPPAVR
Trigger: GCGAACAGCTGGAGGGTGGCAGTGGGACCGCTCCGG...CAGGCCAATGGGGAGGACATCGATGTCACCTCCAATGACTAGGGTGGGCAACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394111.6
CDS-3UTR CCA 90 bp GAAAGACCTGGGCCTGTCCTCCCTCAAGATACAGGATGGCCCTTCCCTATGTCTCGCTTGGCCGCGGGCTaGAACATGGTCGCAGCCGCG +
Preference number: 4 (lower is better)
Translates to: ERPGPVLPQDTGWPFPMSRLAAG*NMVAAA
Trigger: CGCGGCTGCGACCATGTTCCAGCCCGCGGCCAAGCG...AGACATAGGGAAGGGCCATCCTGTATCTTGAGGGAGGACAGGCCCAGGTCTTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258106.11
CDS-3UTR CCA 90 bp CACGACTTCGGACTGGAACCGTCAGCCTTTGTGAATGGTGTTCCCTCCCCCAGACCGTGCGGATCCGCTTaGGCTTGCGTGCGAAGGGGC +
Preference number: 4 (lower is better)
Translates to: HDFGLEPSAFVNGVPSPRPCGSA*ACVRRG
Trigger: GCCCCTTCGCACGCAAGCCCAAGCGGATCCGCACGG...TCTGGGGGAGGGAACACCATTCACAAAGGCTGACGGTTCCAGTCCGAAGTCGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000258106.11
CDS-3UTR CCA 90 bp TGGTTGCCCACCCTAGTCATTGGAGGTGACATCGATGTCCTCCCCATTGGCCTGCCGTGCGGATCCGCTTaGGCTTGCGTGCGAAGGGGC +
Preference number: 4 (lower is better)
Translates to: WLPTLVIGGDIDVLPIGLPCGSA*ACVRRG
Trigger: GCCCCTTCGCACGCAAGCCCAAGCGGATCCGCACGG...CAGGCCAATGGGGAGGACATCGATGTCACCTCCAATGACTAGGGTGGGCAACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394111.6
CDS-3UTR CCA 90 bp ACTGGAACCGTCAGCCTTTGTGAATGGTGTTCCCTCCCCCAGACCCCAATCCTCGCCCACGCAGGGGCCTaGCCAGCAGCAAGCAGCACT +
Preference number: 4 (lower is better)
Translates to: TGTVSLCEWCSLPQTPILAHAGA*PAASST
Trigger: AGTGCTGCTTGCTGCTGGCCAGGCCCCTGCGTGGGC...GAGGATTGGGGTCTGGGGGAGGGAACACCATTCACAAAGGCTGACGGTTCCAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000258106.11
CDS-3UTR CCA 90 bp TGGTTGCCCACCCTAGTCATTGGAGGTGACATCGATGTCCTCCCCATTGGCCTGCTGGGCGCGCAGATCTaGGTTGGGCCTCCTGACGCC +
Preference number: 4 (lower is better)
Translates to: WLPTLVIGGDIDVLPIGLLGAQI*VGPPDA
Trigger: GGCGTCAGGAGGCCCAACCCAGATCTGCGCGCCCAG...CAGGCCAATGGGGAGGACATCGATGTCACCTCCAATGACTAGGGTGGGCAACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394111.6
CDS-3UTR TCA 90 bp CCAGGCCTCAGCCAGCCCATTGCTTGTCCCTCTGTCAATGGCGGCCCCGGGCTTCCTAGTCATTGGAGGTaGCATCGATGTCCTCCCCAT +
Preference number: 4 (lower is better)
Translates to: PGLSQPIACPSVNGGPGLPSHWR*HRCPPH
Trigger: ATGGGGAGGACATCGATGTCACCTCCAATGACTAGG...AAGCCCGGGGCCGCCATTGACAGAGGGACAAGCAATGGGCTGGCTGAGGCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258106.11
ENST00000394111.6
CDS-3UTR TCA 90 bp CCTCAACTGGAGAAGCCACCAGAGTCTCTAGGCAGAGGGAAGCACTCTCCCTCTAGCCCTGTGGGGCCATaGCTCCAGGCCTCCCCAAAG +
Preference number: 4 (lower is better)
Translates to: PQLEKPPESLGRGKHSPSSPVGP*LQASPK
Trigger: CTTTGGGGAGGCCTGGAGTCATGGCCCCACAGGGCT...AGAGGGAGAGTGCTTCCCTCTGCCTAGAGACTCTGGTGGCTTCTCCAGTTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258106.11
CDS-3UTR TCA 90 bp AGCAAGCAGCACTCTGCCCTCGTGGGTTTGTGGTTGCCCACCCTAGTCATTGGAAGCCCTGTGGGGCCATaGCTCCAGGCCTCCCCAAAG +
Preference number: 4 (lower is better)
Translates to: SKQHSALVGLWLPTLVIGSPVGP*LQASPK
Trigger: CTTTGGGGAGGCCTGGAGTCATGGCCCCACAGGGCT...TCCAATGACTAGGGTGGGCAACCACAAACCCACGAGGGCAGAGTGCTGCTTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394111.6
CDS-3UTR GCA 90 bp TTCGGACTGGAACCGTCAGCCTTTGTGAATGGTGTTCCCTCCCCCAGACCCCAAGGATCCGCTTGGGCTTaGGTGCGAAGGGGCCGTGCA +
Preference number: 4 (lower is better)
Translates to: FGLEPSAFVNGVPSPRPQGSAWA*VRRGRA
Trigger: TGCACGGCCCCTTCGCACGCAAGCCCAAGCGGATCC...TTGGGGTCTGGGGGAGGGAACACCATTCACAAAGGCTGACGGTTCCAGTCCGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000258106.11
CDS-3UTR GCA 90 bp TCAACCTGCCCAGCGGTTCTCCAAGGACAGGTGAGCATCCTGGTGGGCCCACGAGAGCCCTTCTTCTTCTaGTCGGACTCAGGCCCTTCC +
Preference number: 4 (lower is better)
Translates to: STCPAVLQGQVSILVGPREPFFF*SDSGPS
Trigger: GGAAGGGCCTGAGTCCGAGCAGAAGAAGAAGGGCTC...TCGTGGGCCCACCAGGATGCTCACCTGTCCTTGGAGAACCGCTGGGCAGGTTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258106.11
CDS-3UTR GCA 90 bp GAGAAGGCCAAGTGGTCCCAGGCCTCAGCCAGCCCATTGCTTGTCCCTCTGTCATCCTCCCCATTGGCCTaGTTCGTGGCAATGCGCCAC +
Preference number: 4 (lower is better)
Translates to: EKAKWSQASASPLLVPLSSSPLA*FVAMRH
Trigger: GTGGCGCATTGCCACGAAGCAGGCCAATGGGGAGGA...TGACAGAGGGACAAGCAATGGGCTGGCTGAGGCCTGGGACCACTTGGCCTTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258106.11
ENST00000394111.6
CDS-3UTR GCA 90 bp GCCCATTGCTTGTCCCTCTGTCAATGGCGGCCCCGGGCTTCAAGCCCTGTGGGGCTAGCCTGTTTCTCCTaGTGTGGAGCTGGAGGTAGA +
Preference number: 4 (lower is better)
Translates to: AHCLSLCQWRPRASSPVGLACFS*CGAGGR
Trigger: TCTACCTCCAGCTCCACAGCAGGAGAAACAGGCTAG...CCCCACAGGGCTTGAAGCCCGGGGCCGCCATTGACAGAGGGACAAGCAATGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258106.11
CDS-3UTR GCA 90 bp AGCAGCAAGCAGCACTCTGCCCTCGTGGGTTTGTGGTTGCCCACCCTAGTCATTAGTGCCCAGACACGGTaGCGCGACCGGCTTGGACCA +
Preference number: 4 (lower is better)
Translates to: SSKQHSALVGLWLPTLVISAQTR*RDRLGP
Trigger: TGGTCCAAGCCGGTCGCGGCACCGTGTCTGGGCACT...AATGACTAGGGTGGGCAACCACAAACCCACGAGGGCAGAGTGCTGCTTGCTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394111.6
CDS-3UTR CCA 90 bp ACTGGAACCGTCAGCCTTTGTGAATGGTGTTCCCTCCCCCAGACCCCAATCCTCGCGCGGGGTGGTTCATaGCCTCGGGGAACACGAGCT +
Preference number: 4 (lower is better)
Translates to: TGTVSLCEWCSLPQTPILARGGS*PRGTRA
Trigger: AGCTCGTGTTCCCCGAGGCCATGAACCACCCCGCGC...GAGGATTGGGGTCTGGGGGAGGGAACACCATTCACAAAGGCTGACGGTTCCAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000258106.11
CDS-3UTR CCA 90 bp AGCCTTAAGCCCTGTCTCTGCAGTCTCAACCTGCCCAGCGGTTCTCCAAGGACAAGAGGGTCCCGGTGCTaGGCGCCGAAGAAGGAGTGC +
Preference number: 4 (lower is better)
Translates to: SLKPCLCSLNLPSGSPRTRGSRC*APKKEC
Trigger: GCACTCCTTCTTCGGCGCCCAGCACCGGGACCCTCT...TGTCCTTGGAGAACCGCTGGGCAGGTTGAGACTGCAGAGACAGGGCTTAAGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258106.11
CDS-3UTR CCA 90 bp TCTCCTCAACTGGAGAAGCCACCAGAGTCTCTAGGCAGAGGGAAGCACTCTCCCGGCACGTCGCTGGCCTaGAAGCGGTGGCCGAAGAAG +
Preference number: 4 (lower is better)
Translates to: SPQLEKPPESLGRGKHSPGTSLA*KRWPKK
Trigger: CTTCTTCGGCCACCGCTTCCAGGCCAGCGACGTGCC...GGGAGAGTGCTTCCCTCTGCCTAGAGACTCTGGTGGCTTCTCCAGTTGAGGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258106.11
CDS-3UTR CCA 90 bp ATTGCTTGTCCCTCTGTCAATGGCGGCCCCGGGCTTCAAGCCCTGTGGGGCCATCGATGTCCTCCCCATTaGCCTGCTTCGTGGCAATGC +
Preference number: 4 (lower is better)
Translates to: IACPSVNGGPGLQALWGHRCPPH*PASWQC
Trigger: GCATTGCCACGAAGCAGGCCAATGGGGAGGACATCG...ATGGCCCCACAGGGCTTGAAGCCCGGGGCCGCCATTGACAGAGGGACAAGCAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000258106.11
ENST00000394111.6
CDS-3UTR CCA 90 bp AGCAAGCAGCACTCTGCCCTCGTGGGTTTGTGGTTGCCCACCCTAGTCATTGGAAGCCTGGCCAGGGAGTaGCCAGAGTCCAGCTTGGGC +
Preference number: 4 (lower is better)
Translates to: SKQHSALVGLWLPTLVIGSLARE*PESSLG
Trigger: GCCCAAGCTGGACTCTGGCCACTCCCTGGCCAGGCT...TCCAATGACTAGGGTGGGCAACCACAAACCCACGAGGGCAGAGTGCTGCTTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394111.6
CDS-3UTR CCA 90 bp TTCGGACTGGAACCGTCAGCCTTTGTGAATGGTGTTCCCTCCCCCAGACCCCAAGGCCTCCCCAAAGCCTaGCCAGGGAGTGGCCAGAGT +
Preference number: 4 (lower is better)
Translates to: FGLEPSAFVNGVPSPRPQGLPKA*PGSGQS
Trigger: ACTCTGGCCACTCCCTGGCCAGGCTTTGGGGAGGCC...TTGGGGTCTGGGGGAGGGAACACCATTCACAAAGGCTGACGGTTCCAGTCCGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000258106.11
CDS-3UTR CCA 90 bp CCTCAGCCAGCCCATTGCTTGTCCCTCTGTCAATGGCGGCCCCGGGCTTCAAGCCTCTGGGGCTGGAGCTaGATGCCCGTGTCATTAAGA +
Preference number: 4 (lower is better)
Translates to: PQPAHCLSLCQWRPRASSLWGWS*MPVSLR
Trigger: TCTTAATGACACGGGCATCCAGCTCCAGCCCCAGAG...GCTTGAAGCCCGGGGCCGCCATTGACAGAGGGACAAGCAATGGGCTGGCTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258106.11
CDS-3UTR CCA 90 bp GCTTGTCCCTCTGTCAATGGCGGCCCCGGGCTTCAAGCCCTGTGGGGCCATGACAGGTTTCGCGTTTTCTaGATGTCACGGGGGACAGCT +
Preference number: 4 (lower is better)
Translates to: ACPSVNGGPGLQALWGHDRFRVF*MSRGTA
Trigger: AGCTGTCCCCCGTGACATCCAGAAAACGCGAAACCT...GTCATGGCCCCACAGGGCTTGAAGCCCGGGGCCGCCATTGACAGAGGGACAAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000394111.6
CDS-3UTR TCA 90 bp TCTGCAGTCTCAACCTGCCCAGCGGTTCTCCAAGGACAGGTGAGCATCCTGGTGGTAAGGCCCGAGGGTTaGGCTCGTCTCCCTCCTTTC +
Preference number: 4 (lower is better)
Translates to: SAVSTCPAVLQGQVSILVVRPEG*ARLPPF
Trigger: GAAAGGAGGGAGACGAGCTCAACCCTCGGGCCTTAC...CACCAGGATGCTCACCTGTCCTTGGAGAACCGCTGGGCAGGTTGAGACTGCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258106.11
CDS-3UTR TCA 90 bp TGGTTGCCCACCCTAGTCATTGGAGGTGACATCGATGTCCTCCCCATTGGCCTGCACGCAGAAGCAGCCTaGCCTCCCTCGACCTTCACC +
Preference number: 4 (lower is better)
Translates to: WLPTLVIGGDIDVLPIGLHAEAA*PPSTFT
Trigger: GGTGAAGGTCGAGGGAGGTCAGGCTGCTTCTGCGTG...CAGGCCAATGGGGAGGACATCGATGTCACCTCCAATGACTAGGGTGGGCAACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394111.6
CDS-3UTR TCA 90 bp CCTCAGCCAGCCCATTGCTTGTCCCTCTGTCAATGGCGGCCCCGGGCTTCAAGCCTGCGACCTTGTTCCTaGGGTTTCGCGTTTTCTGGA +
Preference number: 4 (lower is better)
Translates to: PQPAHCLSLCQWRPRASSLRPCS*GFAFSG
Trigger: TCCAGAAAACGCGAAACCTCAGGAACAAGGTCGCAG...GCTTGAAGCCCGGGGCCGCCATTGACAGAGGGACAAGCAATGGGCTGGCTGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394111.6
CDS-3UTR GCA 90 bp GAGAAGGCCAAGTGGTCCCAGGCCTCAGCCAGCCCATTGCTTGTCCCTCTGTCAGAGCCCTTCTTCTTCTaGTCGGACTCAGGCCCTTCC +
Preference number: 4 (lower is better)
Translates to: EKAKWSQASASPLLVPLSEPFFF*SDSGPS
Trigger: GGAAGGGCCTGAGTCCGAGCAGAAGAAGAAGGGCTC...TGACAGAGGGACAAGCAATGGGCTGGCTGAGGCCTGGGACCACTTGGCCTTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258106.11
ENST00000394111.6
CDS-3UTR GCA 90 bp TCCTCAACTGGAGAAGCCACCAGAGTCTCTAGGCAGAGGGAAGCACTCTCCCTCGGCCCTGAACGCGTTTaGTCTACCAGCCCCCACTGG +
Preference number: 4 (lower is better)
Translates to: SSTGEATRVSRQREALSLGPERV*STSPHW
Trigger: CCAGTGGGGGCTGGTAGAGCAAACGCGTTCAGGGCC...GAGGGAGAGTGCTTCCCTCTGCCTAGAGACTCTGGTGGCTTCTCCAGTTGAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000258106.11
CDS-3UTR GCA 90 bp TCAACCTGCCCAGCGGTTCTCCAAGGACAGGTGAGCATCCTGGTGGGCCCACGACTTAAGCCCTGTCTCTaGAGTCTCAACCTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: STCPAVLQGQVSILVGPRLKPCL*SLNLPS
Trigger: GCTGGGCAGGTTGAGACTGCAGAGACAGGGCTTAAG...TCGTGGGCCCACCAGGATGCTCACCTGTCCTTGGAGAACCGCTGGGCAGGTTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258106.11
CDS-3UTR GCA 90 bp AGCAGCAAGCAGCACTCTGCCCTCGTGGGTTTGTGGTTGCCCACCCTAGTCATTTGGAAGCAGCTCCAGTaGCCAGACACGGTGCCGCGA +
Preference number: 4 (lower is better)
Translates to: SSKQHSALVGLWLPTLVIWKQLQ*PDTVPR
Trigger: TCGCGGCACCGTGTCTGGGCACTGGAGCTGCTTCCA...AATGACTAGGGTGGGCAACCACAAACCCACGAGGGCAGAGTGCTGCTTGCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394111.6
CDS-3UTR CCA 90 bp CACGACTTCGGACTGGAACCGTCAGCCTTTGTGAATGGTGTTCCCTCCCCCAGACGGTGCCGCCGTCCTTaGCCACCAAGGACTCTATGG +
Preference number: 4 (lower is better)
Translates to: HDFGLEPSAFVNGVPSPRRCRRP*PPRTLW
Trigger: CCATAGAGTCCTTGGTGGCCAAGGACGGCGGCACCG...TCTGGGGGAGGGAACACCATTCACAAAGGCTGACGGTTCCAGTCCGAAGTCGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000258106.11
CDS-3UTR CCA 90 bp TTCGGACTGGAACCGTCAGCCTTTGTGAATGGTGTTCCCTCCCCCAGACCCCAAGAGGAGAAGGCCAAGTaGTCCCAGGCCTCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: FGLEPSAFVNGVPSPRPQEEKAK*SQASAS
Trigger: GCTGGCTGAGGCCTGGGACCACTTGGCCTTCTCCTC...TTGGGGTCTGGGGGAGGGAACACCATTCACAAAGGCTGACGGTTCCAGTCCGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000258106.11
CDS-3UTR CCA 90 bp GCCCATTGCTTGTCCCTCTGTCAATGGCGGCCCCGGGCTTCAAGCCCTGTGGGGAGGGAAGGGGGACACTaGGGATCACTAAACTACAGT +
Preference number: 4 (lower is better)
Translates to: AHCLSLCQWRPRASSPVGREGGH*GSLNYS
Trigger: ACTGTAGTTTAGTGATCCCCAGTGTCCCCCTTCCCT...CCCCACAGGGCTTGAAGCCCGGGGCCGCCATTGACAGAGGGACAAGCAATGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000258106.11
ENST00000394111.6
CDS-3UTR CCA 90 bp ATTGCTTGTCCCTCTGTCAATGGCGGCCCCGGGCTTCAAGCCCTGTGGGGCCATGTCAGCCTTTGTGAATaGTGTTCCCTCCCCCAGACC +
Preference number: 4 (lower is better)
Translates to: IACPSVNGGPGLQALWGHVSLCE*CSLPQT
Trigger: GGTCTGGGGGAGGGAACACCATTCACAAAGGCTGAC...ATGGCCCCACAGGGCTTGAAGCCCGGGGCCGCCATTGACAGAGGGACAAGCAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000258106.11
CDS-3UTR CCA 90 bp AGCAGCAAGCAGCACTCTGCCCTCGTGGGTTTGTGGTTGCCCACCCTAGTCATTCACGGGGGACAGCTCTaGAAAGGGGACGCTCACTCC +
Preference number: 4 (lower is better)
Translates to: SSKQHSALVGLWLPTLVIHGGQL*KGDAHS
Trigger: GGAGTGAGCGTCCCCTTTCCAGAGCTGTCCCCCGTG...AATGACTAGGGTGGGCAACCACAAACCCACGAGGGCAGAGTGCTGCTTGCTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394111.6
CDS-3UTR TCA 90 bp TGGTTGCCCACCCTAGTCATTGGAGGTGACATCGATGTCCTCCCCATTGGCCTGTCTCACGACAGGCTGTaGGAGCCGGGACTCCCCAAA +
Preference number: 4 (lower is better)
Translates to: WLPTLVIGGDIDVLPIGLSHDRL*EPGLPK
Trigger: TTTGGGGAGTCCCGGCTCTCACAGCCTGTCGTGAGA...CAGGCCAATGGGGAGGACATCGATGTCACCTCCAATGACTAGGGTGGGCAACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394111.6
CDS-3UTR GCA 90 bp AGCAGCAAGCAGCACTCTGCCCTCGTGGGTTTGTGGTTGCCCACCCTAGTCATTTCCTCCCCATTGGCCTaGTTCGTGGCAATGCGCCAC +
Preference number: 4 (lower is better)
Translates to: SSKQHSALVGLWLPTLVISSPLA*FVAMRH
Trigger: GTGGCGCATTGCCACGAAGCAGGCCAATGGGGAGGA...AATGACTAGGGTGGGCAACCACAAACCCACGAGGGCAGAGTGCTGCTTGCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394111.6
CDS-3UTR CCA 90 bp GAGAAGGCCAAGTGGTCCCAGGCCTCAGCCAGCCCATTGCTTGTCCCTCTGTCAGCCCTCGTGGGTTTGTaGTTGCCCACCCTAGTCATT +
Preference number: 4 (lower is better)
Translates to: EKAKWSQASASPLLVPLSALVGL*LPTLVI
Trigger: AATGACTAGGGTGGGCAACCACAAACCCACGAGGGC...TGACAGAGGGACAAGCAATGGGCTGGCTGAGGCCTGGGACCACTTGGCCTTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258106.11
ENST00000394111.6
CDS-3UTR CCA 90 bp TCCTCAACTGGAGAAGCCACCAGAGTCTCTAGGCAGAGGGAAGCACTCTCCCTCTTGTCCCTCTGTCAATaGCGGCCCCGGGCTTCAAGC +
Preference number: 4 (lower is better)
Translates to: SSTGEATRVSRQREALSLLSLCQ*RPRASS
Trigger: GCTTGAAGCCCGGGGCCGCCATTGACAGAGGGACAA...GAGGGAGAGTGCTTCCCTCTGCCTAGAGACTCTGGTGGCTTCTCCAGTTGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258106.11
CDS-3UTR CCA 90 bp AGCAGCAAGCAGCACTCTGCCCTCGTGGGTTTGTGGTTGCCCACCCTAGTCATTTTGTCCCTCTGTCAATaGCGGCCCCGGGCTTCAAGC +
Preference number: 4 (lower is better)
Translates to: SSKQHSALVGLWLPTLVILSLCQ*RPRASS
Trigger: GCTTGAAGCCCGGGGCCGCCATTGACAGAGGGACAA...AATGACTAGGGTGGGCAACCACAAACCCACGAGGGCAGAGTGCTGCTTGCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394111.6
CDS-3UTR CCA 90 bp CCTCAACTGGAGAAGCCACCAGAGTCTCTAGGCAGAGGGAAGCACTCTCCCTCTTCTACCAGCCCCCACTaGCCCTCAGAGCCGGAATCT +
Preference number: 4 (lower is better)
Translates to: PQLEKPPESLGRGKHSPSSTSPH*PSEPES
Trigger: AGATTCCGGCTCTGAGGGCCAGTGGGGGCTGGTAGA...AGAGGGAGAGTGCTTCCCTCTGCCTAGAGACTCTGGTGGCTTCTCCAGTTGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000258106.11
CDS-3UTR TCA 90 bp TCTCCTCAACTGGAGAAGCCACCAGAGTCTCTAGGCAGAGGGAAGCACTCTCCCCAATGCGCCACCGGTTaGTGTGATGGGAGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: SPQLEKPPESLGRGKHSPQCATG*CDGSPS
Trigger: AGAAGGGCTCCCATCACATCAACCGGTGGCGCATTG...GGGAGAGTGCTTCCCTCTGCCTAGAGACTCTGGTGGCTTCTCCAGTTGAGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258106.11
CDS-3UTR TCA 90 bp GAGAAGGCCAAGTGGTCCCAGGCCTCAGCCAGCCCATTGCTTGTCCCTCTGTCACCTAGTCATTGGAGGTaGCATCGATGTCCTCCCCAT +
Preference number: 4 (lower is better)
Translates to: EKAKWSQASASPLLVPLSPSHWR*HRCPPH
Trigger: ATGGGGAGGACATCGATGTCACCTCCAATGACTAGG...TGACAGAGGGACAAGCAATGGGCTGGCTGAGGCCTGGGACCACTTGGCCTTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258106.11
ENST00000394111.6
CDS-3UTR GCA 90 bp TCTCAATACGTTAAGAAAGACCTGGGCCTGTCCTCCCTCAAGATACAGGATGGCACCCAGCCAGGCACATaGACACCCGCCCGCACCCCT +
Preference number: 4 (lower is better)
Translates to: SQYVKKDLGLSSLKIQDGTQPGT*TPARTP
Trigger: AGGGGTGCGGGCGGGTGTGCATGTGCCTGGCTGGGT...GCCATCCTGTATCTTGAGGGAGGACAGGCCCAGGTCTTTCTTAACGTATTGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258106.11
CDS-3UTR GCA 90 bp AGCCTTAAGCCCTGTCTCTGCAGTCTCAACCTGCCCAGCGGTTCTCCAAGGACATCACTGGGGACTGGTTaGAGGCTCAGCCTTAAGCCC +
Preference number: 4 (lower is better)
Translates to: SLKPCLCSLNLPSGSPRTSLGTG*RLSLKP
Trigger: GGGCTTAAGGCTGAGCCTGCAACCAGTCCCCAGTGA...TGTCCTTGGAGAACCGCTGGGCAGGTTGAGACTGCAGAGACAGGGCTTAAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258106.11
CDS-3UTR GCA 90 bp TGGTTGCCCACCCTAGTCATTGGAGGTGACATCGATGTCCTCCCCATTGGCCTGAACCGCGGACGACTCTaGTCCGGCCAGTTTTTCCGT +
Preference number: 4 (lower is better)
Translates to: WLPTLVIGGDIDVLPIGLNRGRL*SGQFFR
Trigger: ACGGAAAAACTGGCCGGAGCAGAGTCGTCCGCGGTT...CAGGCCAATGGGGAGGACATCGATGTCACCTCCAATGACTAGGGTGGGCAACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394111.6
CDS-3UTR GCA 90 bp AGCAAGCAGCACTCTGCCCTCGTGGGTTTGTGGTTGCCCACCCTAGTCATTGGAAACCACACCTTCACCTaGGTCTCGGAGAGGCTGAGA +
Preference number: 4 (lower is better)
Translates to: SKQHSALVGLWLPTLVIGNHTFT*VSERLR
Trigger: TCTCAGCCTCTCCGAGACGCAGGTGAAGGTGTGGTT...TCCAATGACTAGGGTGGGCAACCACAAACCCACGAGGGCAGAGTGCTGCTTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394111.6
CDS-3UTR GCA 90 bp CACGACTTCGGACTGGAACCGTCAGCCTTTGTGAATGGTGTTCCCTCCCCCAGACCTCAGCCAGCCCATTaGTTGTCCCTCTGTCAATGG +
Preference number: 4 (lower is better)
Translates to: HDFGLEPSAFVNGVPSPRPQPAH*LSLCQW
Trigger: CCATTGACAGAGGGACAAGCAATGGGCTGGCTGAGG...TCTGGGGGAGGGAACACCATTCACAAAGGCTGACGGTTCCAGTCCGAAGTCGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000258106.11
CDS-3UTR CCA 90 bp TCTCAATACGTTAAGAAAGACCTGGGCCTGTCCTCCCTCAAGATACAGGATGGCCTGGCCTGGAAGCGGTaGCCGAAGAAGCGGTTCCGC +
Preference number: 4 (lower is better)
Translates to: SQYVKKDLGLSSLKIQDGLAWKR*PKKRFR
Trigger: GCGGAACCGCTTCTTCGGCCACCGCTTCCAGGCCAG...GCCATCCTGTATCTTGAGGGAGGACAGGCCCAGGTCTTTCTTAACGTATTGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258106.11
CDS-3UTR CCA 90 bp TCTCCTCAACTGGAGAAGCCACCAGAGTCTCTAGGCAGAGGGAAGCACTCTCCCGCCCTCGTGGGTTTGTaGTTGCCCACCCTAGTCATT +
Preference number: 4 (lower is better)
Translates to: SPQLEKPPESLGRGKHSPALVGL*LPTLVI
Trigger: AATGACTAGGGTGGGCAACCACAAACCCACGAGGGC...GGGAGAGTGCTTCCCTCTGCCTAGAGACTCTGGTGGCTTCTCCAGTTGAGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258106.11
CDS-3UTR CCA 90 bp ATTGCTTGTCCCTCTGTCAATGGCGGCCCCGGGCTTCAAGCCCTGTGGGGCCATAAACAAAAGGGAGATTaGAGACACGGAGAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: IACPSVNGGPGLQALWGHKQKGD*RHGEQL
Trigger: CAGCTGCTCTCCGTGTCTCCAATCTCCCTTTTGTTT...ATGGCCCCACAGGGCTTGAAGCCCGGGGCCGCCATTGACAGAGGGACAAGCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000258106.11
ENST00000394111.6
CDS-3UTR CCA 90 bp AGCAGCAAGCAGCACTCTGCCCTCGTGGGTTTGTGGTTGCCCACCCTAGTCATTGCCTCGGAGACACTGTaGCTTAAATTGAAGCTGGCC +
Preference number: 4 (lower is better)
Translates to: SSKQHSALVGLWLPTLVIASETL*LKLKLA
Trigger: GGCCAGCTTCAATTTAAGCCACAGTGTCTCCGAGGC...AATGACTAGGGTGGGCAACCACAAACCCACGAGGGCAGAGTGCTGCTTGCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394111.6
CDS-3UTR CCA 90 bp AGCAAGCAGCACTCTGCCCTCGTGGGTTTGTGGTTGCCCACCCTAGTCATTGGAAGGGAAGGGGGACACTaGGGATCACTAAACTACAGT +
Preference number: 4 (lower is better)
Translates to: SKQHSALVGLWLPTLVIGREGGH*GSLNYS
Trigger: ACTGTAGTTTAGTGATCCCCAGTGTCCCCCTTCCCT...TCCAATGACTAGGGTGGGCAACCACAAACCCACGAGGGCAGAGTGCTGCTTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394111.6
CDS-3UTR CCA 90 bp CCTCAACTGGAGAAGCCACCAGAGTCTCTAGGCAGAGGGAAGCACTCTCCCTCTCCTCAAGATACAGGATaGCCCTTCCCTATGTCTAGC +
Preference number: 4 (lower is better)
Translates to: PQLEKPPESLGRGKHSPSPQDTG*PFPMSS
Trigger: GCTAGACATAGGGAAGGGCCATCCTGTATCTTGAGG...AGAGGGAGAGTGCTTCCCTCTGCCTAGAGACTCTGGTGGCTTCTCCAGTTGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258106.11
CDS-3UTR CCA 90 bp TTCGGACTGGAACCGTCAGCCTTTGTGAATGGTGTTCCCTCCCCCAGACCCCAAAAACAAAAGGGAGATTaGAGACACGGAGAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: FGLEPSAFVNGVPSPRPQKQKGD*RHGEQL
Trigger: CAGCTGCTCTCCGTGTCTCCAATCTCCCTTTTGTTT...TTGGGGTCTGGGGGAGGGAACACCATTCACAAAGGCTGACGGTTCCAGTCCGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000258106.11
CDS GCA 90 bp GCAGCCGGGCTCTGGGGAGCGCTCCGCGTCCTGGCGCCGCCGCCTTaGGGGGTGTGCACCCAGCCAGGCACATGCACACCCGCCCGCACC +
Preference number: 5 (lower is better)
Translates to: AAGLWGALRVLAPPP*GVCTQPGTCTPART
Trigger: GGTGCGGGCGGGTGTGCATGTGCCTGGCTGGGTGCACACCCCGCAAGGCGGCGGCGCCAGGACGCGGAGCGCTCCCCAGAGCCCGGCTGC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000258106.11
CDS GCA 90 bp AGGCGGCCGCCGCCAGGAGATGGGAGCCCGCGCCCCCGCCGCCAGTaGCCCCGCCGGTGCCGCCGTCCTTGGCCACCAAGGACTCTATGG +
Preference number: 5 (lower is better)
Translates to: RRPPPGDGSPRPRRQ*PRRCRRPWPPRTLW
Trigger: CCATAGAGTCCTTGGTGGCCAAGGACGGCGGCACCGGCGGGGGCACTGGCGGCGGGGGCGCGGGCTCCCATCTCCTGGCGGCGGCCGCCT
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000258106.11
CDS TCA 90 bp AGCCACTCACGAAGGCCGCCTCGGCCGCGCTGGGGTGAGGGTAGTTaGGCGCCGTGGGCCGGAGCGGTTCCTCGGAGGCGGCCGCCGCCA +
Preference number: 5 (lower is better)
Translates to: SHSRRPPRPRWGEGS*APWAGAVPRRRPPP
Trigger: TGGCGGCGGCCGCCTCCGAGGAACCGCTCCGGCCCACGGCGCTCAACTACCCTCACCCCAGCGCGGCCGAGGCGGCCTTCGTGAGTGGCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258106.11
CDS CCA 90 bp GGGAGCTGTGCGAGGCAGCCGGGCTCTGGGGAGCGCTCCGCGTCCTaGCGCCGCCGCCTTGCGGGGTGTGCACCCAGCCAGGCACATGCA +
Preference number: 5 (lower is better)
Translates to: GSCARQPGSGERSAS*RRRLAGCAPSQAHA
Trigger: TGCATGTGCCTGGCTGGGTGCACACCCCGCAAGGCGGCGGCGCCAGGACGCGGAGCGCTCCCCAGAGCCCGGCTGCCTCGCACAGCTCCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258106.11
CDS GCA 90 bp TGGAGAGGGTCCCGGTGCTGGGCGCCGAAGAAGGAGTGCGGGGGCTaGAGCGGGGAGGCGCCCAGCTGGTGCGCCGGATGCACGGTCAGC +
Preference number: 5 (lower is better)
Translates to: WRGSRCWAPKKECGG*SGEAPSWCAGCTVS
Trigger: GCTGACCGTGCATCCGGCGCACCAGCTGGGCGCCTCCCCGCTGCAGCCCCCGCACTCCTTCTTCGGCGCCCAGCACCGGGACCCTCTCCA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258106.11
ENST00000473732.1
CDS GCA 90 bp GCCAGGCGGGGCACTGCGCGGGAGAAGCCGCCGGAGCGGTCCCACTaGCACCCTCCAGCTGTTCGCGGGGCTGGAAGCAGCTCCAGTGCC +
Preference number: 5 (lower is better)
Translates to: ARRGTAREKPPERSH*HPPAVRGAGSSSSA
Trigger: GGCACTGGAGCTGCTTCCAGCCCCGCGAACAGCTGGAGGGTGGCAGTGGGACCGCTCCGGCGGCTTCTCCCGCGCAGTGCCCCGCCTGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394111.6
CDS CCA 90 bp CGCTTGGGCTTGCGTGCGAAGGGGCCGTGCAGAAGCAGCCCGTCCTaGGGCACGTCGCTGGCTGCGGCCCCGCCGCCGACGGCAACACAC +
Preference number: 5 (lower is better)
Translates to: RLGLRAKGPCRSSPS*GTSLAAAPPPTATH
Trigger: GTGTGTTGCCGTCGGCGGCGGGGCCGCAGCCAGCGACGTGCCCCAGGACGGGCTGCTTCTGCACGGCCCCTTCGCACGCAAGCCCAAGCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464675.2
CDS CCA 90 bp CGCCCAGCTGGTGCGCCGGATGCACGGTCAGCGCGGGGTGGTTCATaGCCTCGGGGAACACGAGCTCGGGCCCACCGTAGAGCGAGCGGC +
Preference number: 5 (lower is better)
Translates to: RPAGAPDARSARGGS*PRGTRARAHRRASG
Trigger: GCCGCTCGCTCTACGGTGGGCCCGAGCTCGTGTTCCCCGAGGCCATGAACCACCCCGCGCTGACCGTGCATCCGGCGCACCAGCTGGGCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258106.11
CDS CCA 90 bp GCCGCCGGAGCGGTCCCACTGCCACCCTCCAGCTGTTCGCGGGGCTaGAAGCAGCTCCAGTGCCCAGACACGGTGCCGCGACCGGCTTGG +
Preference number: 5 (lower is better)
Translates to: AAGAVPLPPSSCSRG*KQLQCPDTVPRPAW
Trigger: CCAAGCCGGTCGCGGCACCGTGTCTGGGCACTGGAGCTGCTTCCAGCCCCGCGAACAGCTGGAGGGTGGCAGTGGGACCGCTCCGGCGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394111.6
CDS TCA 90 bp GGACGGCGGGCCTCGGCACTGGGAGATCCACCCCCTCGCCTTCTCTaGGGCTCTGGGGGCTCAAGTGTCGGCGGGCCGGACCAGGTCAGG +
Preference number: 5 (lower is better)
Translates to: GRRASALGDPPPRLL*GSGGSSVGGPDQVR
Trigger: CCTGACCTGGTCCGGCCCGCCGACACTTGAGCCCCCAGAGCCTCAGAGAAGGCGAGGGGGTGGATCTCCCAGTGCCGAGGCCCGCCGTCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000394111.6
CDS GCA 90 bp CCAGCTGTTCGCGGGGCTGGAAGCAGCTCCAGTGCCCAGACACGGTaGCGCGACCGGCTTGGACCAGGACGGCGGGCCTCGGCACTGGGA +
Preference number: 5 (lower is better)
Translates to: PAVRGAGSSSSAQTR*RDRLGPGRRASALG
Trigger: TCCCAGTGCCGAGGCCCGCCGTCCTGGTCCAAGCCGGTCGCGGCACCGTGTCTGGGCACTGGAGCTGCTTCCAGCCCCGCGAACAGCTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394111.6
CDS GCA 90 bp CCACTGCCACCCTCCAGCTGTTCGCGGGGCTGGAAGCAGCTCCAGTaGCCAGACACGGTGCCGCGACCGGCTTGGACCAGGACGGCGGGC +
Preference number: 5 (lower is better)
Translates to: PLPPSSCSRGWKQLQ*PDTVPRPAWTRTAG
Trigger: GCCCGCCGTCCTGGTCCAAGCCGGTCGCGGCACCGTGTCTGGGCACTGGAGCTGCTTCCAGCCCCGCGAACAGCTGGAGGGTGGCAGTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394111.6
CDS CCA 90 bp GGCTGGAAGCAGCTCCAGTGCCCAGACACGGTGCCGCGACCGGCTTaGACCAGGACGGCGGGCCTCGGCACTGGGAGATCCACCCCCTCG +
Preference number: 5 (lower is better)
Translates to: GWKQLQCPDTVPRPA*TRTAGLGTGRSTPS
Trigger: CGAGGGGGTGGATCTCCCAGTGCCGAGGCCCGCCGTCCTGGTCCAAGCCGGTCGCGGCACCGTGTCTGGGCACTGGAGCTGCTTCCAGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394111.6
CDS CCA 90 bp TTCCTCGCCGCTGCCGGGGTCCATTCTAGCGGCCTGAGCGCTGCCTaGGCGCGCAGATCTGGGTTGGGCCTCCTGACGCCCCAAGGCCAC +
Preference number: 5 (lower is better)
Translates to: FLAAAGVHSSGLSAA*ARRSGLGLLTPQGH
Trigger: GTGGCCTTGGGGCGTCAGGAGGCCCAACCCAGATCTGCGCGCCCAGGCAGCGCTCAGGCCGCTAGAATGGACCCCGGCAGCGGCGAGGAA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394111.6
CDS CCA 90 bp GGCCTCGGCACTGGGAGATCCACCCCCTCGCCTTCTCTGAGGCTCTaGGGGCTCAAGTGTCGGCGGGCCGGACCAGGTCAGGGCCTCGGA +
Preference number: 5 (lower is better)
Translates to: GLGTGRSTPSPSLRL*GLKCRRAGPGQGLG
Trigger: TCCGAGGCCCTGACCTGGTCCGGCCCGCCGACACTTGAGCCCCCAGAGCCTCAGAGAAGGCGAGGGGGTGGATCTCCCAGTGCCGAGGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394111.6
CDS CCA 90 bp CACGGTGCCGCGACCGGCTTGGACCAGGACGGCGGGCCTCGGCACTaGGAGATCCACCCCCTCGCCTTCTCTGAGGCTCTGGGGGCTCAA +
Preference number: 5 (lower is better)
Translates to: HGAATGLDQDGGPRH*EIHPLAFSEALGAQ
Trigger: TTGAGCCCCCAGAGCCTCAGAGAAGGCGAGGGGGTGGATCTCCCAGTGCCGAGGCCCGCCGTCCTGGTCCAAGCCGGTCGCGGCACCGTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000394111.6
CDS-3UTR CAA 90 bp GCTTGTCCCTCTGTCAATGGCGGCCCCGGGCTTCAAGCCCTGTGGGGCCATGACGGTGCCGCGACCGGCTaGGACCAGGACGGCGGGCCT +
Preference number: 5 (lower is better)
Translates to: ACPSVNGGPGLQALWGHDGAATG*DQDGGP
Trigger: AGGCCCGCCGTCCTGGTCCAAGCCGGTCGCGGCACC...GTCATGGCCCCACAGGGCTTGAAGCCCGGGGCCGCCATTGACAGAGGGACAAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394111.6
CDS TCA 90 bp GCGGGCTCCGTGCTAGGCTGCGAGCTGCCAGTAAGGCCCGAGGGTTaGGCTCGTCTCCCTCCTTTCGGAGTCCCGCTGGGACCGACCCCA +
Preference number: 5 (lower is better)
Translates to: AGSVLGCELPVRPEG*ARLPPFGVPLGPTP
Trigger: TGGGGTCGGTCCCAGCGGGACTCCGAAAGGAGGGAGACGAGCTCAACCCTCGGGCCTTACTGGCAGCTCGCAGCCTAGCACGGAGCCCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258106.11
CDS-3UTR CAA 90 bp CCAGGCCTCAGCCAGCCCATTGCTTGTCCCTCTGTCAATGGCGGCCCCGGGCTTCGGATCCGCTTGGGCTaGCGTGCGAAGGGGCCGTGC +
Preference number: 5 (lower is better)
Translates to: PGLSQPIACPSVNGGPGLRIRLG*RAKGPC
Trigger: GCACGGCCCCTTCGCACGCAAGCCCAAGCGGATCCG...AAGCCCGGGGCCGCCATTGACAGAGGGACAAGCAATGGGCTGGCTGAGGCCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258106.11
ENST00000394111.6
CDS-3UTR CAA 90 bp CCTCAGCCAGCCCATTGCTTGTCCCTCTGTCAATGGCGGCCCCGGGCTTCAAGCGCTGGGACCTGGACCTaGCCGGCGCACTGCGGAGAG +
Preference number: 5 (lower is better)
Translates to: PQPAHCLSLCQWRPRASSAGTWT*PAHCGE
Trigger: CTCTCCGCAGTGCGCCGGCAAGGTCCAGGTCCCAGC...GCTTGAAGCCCGGGGCCGCCATTGACAGAGGGACAAGCAATGGGCTGGCTGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394111.6
CDS-3UTR CAA 90 bp CCAGGCCTCAGCCAGCCCATTGCTTGTCCCTCTGTCAATGGCGGCCCCGGGCTTCCGGTGCCGCCGTCCTaGGCCACCAAGGACTCTATG +
Preference number: 5 (lower is better)
Translates to: PGLSQPIACPSVNGGPGLPVPPS*ATKDSM
Trigger: CATAGAGTCCTTGGTGGCCAAGGACGGCGGCACCGG...AAGCCCGGGGCCGCCATTGACAGAGGGACAAGCAATGGGCTGGCTGAGGCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258106.11
CDS TCA 90 bp CATCTCAAGAGAACACGCCAGCCGTCAGGACACGCAGAAGCAGCCTaGCCTCCCTCGACCTTCACCTTCCACCCGCGACCGCGGAACCGC +
Preference number: 5 (lower is better)
Translates to: HLKRTRQPSGHAEAA*PPSTFTFHPRPRNR
Trigger: GCGGTTCCGCGGTCGCGGGTGGAAGGTGAAGGTCGAGGGAGGTCAGGCTGCTTCTGCGTGTCCTGACGGCTGGCGTGTTCTCTTGAGATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394111.6
CDS-3UTR CAA 90 bp TCTGCAGTCTCAACCTGCCCAGCGGTTCTCCAAGGACAGGTGAGCATCCTGGTGGCCGTGCGGATCCGCTaGGGCTTGCGTGCGAAGGGG +
Preference number: 5 (lower is better)
Translates to: SAVSTCPAVLQGQVSILVAVRIR*GLRAKG
Trigger: CCCCTTCGCACGCAAGCCCAAGCGGATCCGCACGGC...CACCAGGATGCTCACCTGTCCTTGGAGAACCGCTGGGCAGGTTGAGACTGCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258106.11
CDS-3UTR CAA 90 bp CCAGGCCTCAGCCAGCCCATTGCTTGTCCCTCTGTCAATGGCGGCCCCGGGCTTCAGCCAGCCCATTGCTaGTCCCTCTGTCAATGGCGG +
Preference number: 5 (lower is better)
Translates to: PGLSQPIACPSVNGGPGLQPAHC*SLCQWR
Trigger: CCGCCATTGACAGAGGGACAAGCAATGGGCTGGCTG...AAGCCCGGGGCCGCCATTGACAGAGGGACAAGCAATGGGCTGGCTGAGGCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258106.11
ENST00000394111.6
CDS-3UTR CAA 90 bp CACGACTTCGGACTGGAACCGTCAGCCTTTGTGAATGGTGTTCCCTCCCCCAGACGGATCCGCTTGGGCTaGCGTGCGAAGGGGCCGTGC +
Preference number: 5 (lower is better)
Translates to: HDFGLEPSAFVNGVPSPRRIRLG*RAKGPC
Trigger: GCACGGCCCCTTCGCACGCAAGCCCAAGCGGATCCG...TCTGGGGGAGGGAACACCATTCACAAAGGCTGACGGTTCCAGTCCGAAGTCGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000258106.11
CDS-3UTR CAA 90 bp TGGTTGCCCACCCTAGTCATTGGAGGTGACATCGATGTCCTCCCCATTGGCCTGGCGCGCAGATCTGGGTaGGGCCTCCTGACGCCCCAA +
Preference number: 5 (lower is better)
Translates to: WLPTLVIGGDIDVLPIGLARRSG*GLLTPQ
Trigger: TTGGGGCGTCAGGAGGCCCAACCCAGATCTGCGCGC...CAGGCCAATGGGGAGGACATCGATGTCACCTCCAATGACTAGGGTGGGCAACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394111.6
CDS TCA 90 bp TCCTCCCCATTGGCCTGCTTCGTGGCAATGCGCCACCGGTTGATGTaGTGGGAGCCCTTCTTCTTCTGCTCGGACTCAGGCCCTTCCTCC +
Preference number: 5 (lower is better)
Translates to: SSPLACFVAMRHRLM*WEPFFFCSDSGPSS
Trigger: GGAGGAAGGGCCTGAGTCCGAGCAGAAGAAGAAGGGCTCCCATCACATCAACCGGTGGCGCATTGCCACGAAGCAGGCCAATGGGGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000258106.11
ENST00000394111.6
ENST00000464675.2
ENST00000491023.3
ENST00000616281.1
CDS TCA 90 bp GCGGGCCGGACCAGGTCAGGGCCTCGGAGACACTGTGGCTTAAATTaGAGCTGGCCAAGTAGCCCGAGCCCATCTCAAGAGAACACGCCA +
Preference number: 5 (lower is better)
Translates to: AGRTRSGPRRHCGLN*SWPSSPSPSQENTP
Trigger: TGGCGTGTTCTCTTGAGATGGGCTCGGGCTACTTGGCCAGCTTCAATTTAAGCCACAGTGTCTCCGAGGCCCTGACCTGGTCCGGCCCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394111.6
CDS TCA 90 bp GGCATCGGCCTCCTGGGCCGCGGTCTGAAGCTGCGACCTTGTTCCTaGGGTTTCGCGTTTTCTGGATGTCACGGGGGACAGCTCTGGAAA +
Preference number: 5 (lower is better)
Translates to: GIGLLGRGLKLRPCS*GFAFSGCHGGQLWK
Trigger: TTTCCAGAGCTGTCCCCCGTGACATCCAGAAAACGCGAAACCTCAGGAACAAGGTCGCAGCTTCAGACCGCGGCCCAGGAGGCCGATGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394111.6
CDS TCA 90 bp AACACAAGAGCTCAGCGGGCCCTGGCACGTTGCTCTTTCTTGGGCTaGGGAGGCCCTGAGTCACTGGGGACTGGTTGCAGGCTCAGCCTT +
Preference number: 5 (lower is better)
Translates to: NTRAQRALARCSFLG*GGPESLGTGCRLSL
Trigger: AAGGCTGAGCCTGCAACCAGTCCCCAGTGACTCAGGGCCTCCTCAGCCCAAGAAAGAGCAACGTGCCAGGGCCCGCTGAGCTCTTGTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616281.1
CDS-3UTR CAA 90 bp CCTCAGCCAGCCCATTGCTTGTCCCTCTGTCAATGGCGGCCCCGGGCTTCAAGCCTCGTGGGTTTGTGGTaGCCCACCCTAGTCATTGGA +
Preference number: 5 (lower is better)
Translates to: PQPAHCLSLCQWRPRASSLVGLW*PTLVIG
Trigger: TCCAATGACTAGGGTGGGCAACCACAAACCCACGAG...GCTTGAAGCCCGGGGCCGCCATTGACAGAGGGACAAGCAATGGGCTGGCTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258106.11
ENST00000394111.6
CDS TCA 90 bp CGATGTCCTCCCCATTGGCCTGCTTCGTGGCAATGCGCCACCGGTTaGTGTGATGGGAGCCCTTCTTCTTCTGCTCGGACTCAGGCCCTT +
Preference number: 5 (lower is better)
Translates to: RCPPHWPASWQCATG*CDGSPSSSARTQAL
Trigger: AAGGGCCTGAGTCCGAGCAGAAGAAGAAGGGCTCCCATCACATCAACCGGTGGCGCATTGCCACGAAGCAGGCCAATGGGGAGGACATCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000258106.11
ENST00000394111.6
ENST00000464675.2
ENST00000491023.3
ENST00000616281.1
CDS-3UTR CAA 90 bp ACAGGTGAGCATCCTGGTGGGCCCACGACTTCGGACTGGAACCGTCAGCCTTTGGCCTCAGCCAGCCCATaGCTTGTCCCTCTGTCAATG +
Preference number: 5 (lower is better)
Translates to: TGEHPGGPTTSDWNRQPLASASP*LVPLSM
Trigger: CATTGACAGAGGGACAAGCAATGGGCTGGCTGAGGC...CAAAGGCTGACGGTTCCAGTCCGAAGTCGTGGGCCCACCAGGATGCTCACCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258106.11
CDS TCA 90 bp GGTGGGAGAATCCAGGAGGGCATAGCCAACAGATCAGGGAGCAGGTaGACCCAACAGGAAGTGGTTGAGTTTGGCCACAAGGGGGTGGCC +
Preference number: 5 (lower is better)
Translates to: GGRIQEGIANRSGSR*TQQEVVEFGHKGVA
Trigger: GGCCACCCCCTTGTGGCCAAACTCAACCACTTCCTGTTGGGTTCACCTGCTCCCTGATCTGTTGGCTATGCCCTCCTGGATTCTCCCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616281.1
CDS-3UTR CAA 90 bp TCTGCAGTCTCAACCTGCCCAGCGGTTCTCCAAGGACAGGTGAGCATCCTGGTGTCGATGTCCTCCCCATaGGCCTGCTTCGTGGCAATG +
Preference number: 5 (lower is better)
Translates to: SAVSTCPAVLQGQVSILVSMSSP*ACFVAM
Trigger: CATTGCCACGAAGCAGGCCAATGGGGAGGACATCGA...CACCAGGATGCTCACCTGTCCTTGGAGAACCGCTGGGCAGGTTGAGACTGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258106.11
CDS-3UTR CAA 90 bp AGCAGCAAGCAGCACTCTGCCCTCGTGGGTTTGTGGTTGCCCACCCTAGTCATTTCTGCCCTCGTGGGTTaGTGGTTGCCCACCCTAGTC +
Preference number: 5 (lower is better)
Translates to: SSKQHSALVGLWLPTLVISALVG*WLPTLV
Trigger: GACTAGGGTGGGCAACCACAAACCCACGAGGGCAGA...AATGACTAGGGTGGGCAACCACAAACCCACGAGGGCAGAGTGCTGCTTGCTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394111.6
CDS-3UTR CAA 90 bp TCTCAATACGTTAAGAAAGACCTGGGCCTGTCCTCCCTCAAGATACAGGATGGCTGGCCAGAGTCCAGCTaGGGCCCACGCAGGGGCCTG +
Preference number: 5 (lower is better)
Translates to: SQYVKKDLGLSSLKIQDGWPESS*GPRRGL
Trigger: CAGGCCCCTGCGTGGGCCCAAGCTGGACTCTGGCCA...GCCATCCTGTATCTTGAGGGAGGACAGGCCCAGGTCTTTCTTAACGTATTGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258106.11
CDS-3UTR CAA 90 bp CCTCAACTGGAGAAGCCACCAGAGTCTCTAGGCAGAGGGAAGCACTCTCCCTCTCAGCCAGCCCATTGCTaGTCCCTCTGTCAATGGCGG +
Preference number: 5 (lower is better)
Translates to: PQLEKPPESLGRGKHSPSQPAHC*SLCQWR
Trigger: CCGCCATTGACAGAGGGACAAGCAATGGGCTGGCTG...AGAGGGAGAGTGCTTCCCTCTGCCTAGAGACTCTGGTGGCTTCTCCAGTTGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258106.11
CDS-3UTR CAA 90 bp TCTCCTCAACTGGAGAAGCCACCAGAGTCTCTAGGCAGAGGGAAGCACTCTCCCAGTAAGGCCCGAGGGTaGAGCTCGTCTCCCTCCTTT +
Preference number: 5 (lower is better)
Translates to: SPQLEKPPESLGRGKHSPSKARG*SSSPSF
Trigger: AAAGGAGGGAGACGAGCTCAACCCTCGGGCCTTACT...GGGAGAGTGCTTCCCTCTGCCTAGAGACTCTGGTGGCTTCTCCAGTTGAGGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258106.11
CDS-3UTR CAA 90 bp AGCAAGCAGCACTCTGCCCTCGTGGGTTTGTGGTTGCCCACCCTAGTCATTGGATCGATGTCCTCCCCATaGGCCTGCTTCGTGGCAATG +
Preference number: 5 (lower is better)
Translates to: SKQHSALVGLWLPTLVIGSMSSP*ACFVAM
Trigger: CATTGCCACGAAGCAGGCCAATGGGGAGGACATCGA...TCCAATGACTAGGGTGGGCAACCACAAACCCACGAGGGCAGAGTGCTGCTTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394111.6
CDS-3UTR CAA 90 bp AGCAGCAAGCAGCACTCTGCCCTCGTGGGTTTGTGGTTGCCCACCCTAGTCATTGCCTCAGCCAGCCCATaGCTTGTCCCTCTGTCAATG +
Preference number: 5 (lower is better)
Translates to: SSKQHSALVGLWLPTLVIASASP*LVPLSM
Trigger: CATTGACAGAGGGACAAGCAATGGGCTGGCTGAGGC...AATGACTAGGGTGGGCAACCACAAACCCACGAGGGCAGAGTGCTGCTTGCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394111.6
CDS TCA 90 bp GTGGTTGAGTTTGGCCACAAGGGGGTGGCCAGTGACTGTGGTTGGTaGCTGTCATTAGCACCGGCAGAATGGTGGCATGGAGGCCAAAGA +
Preference number: 5 (lower is better)
Translates to: VVEFGHKGVASDCGW*LSLAPAEWWHGGQR
Trigger: TCTTTGGCCTCCATGCCACCATTCTGCCGGTGCTAATGACAGTCACCAACCACAGTCACTGGCCACCCCCTTGTGGCCAAACTCAACCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616281.1
CDS CCA 90 bp GGGATGGCAGGGCAGGAAGAGGACACAGTGGGCCAGAGAGAAGGGTaGTTTTCCTGTTCCTCTCAAACAAAGGGTCACAGAGCTGCTGTG +
Preference number: 5 (lower is better)
Translates to: GMAGQEEDTVGQREG*FSCSSQTKGHRAAV
Trigger: CACAGCAGCTCTGTGACCCTTTGTTTGAGAGGAACAGGAAAACCACCCTTCTCTCTGGCCCACTGTGTCCTCTTCCTGCCCTGCCATCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616281.1
CDS-3UTR CAA 90 bp ATTGCTTGTCCCTCTGTCAATGGCGGCCCCGGGCTTCAAGCCCTGTGGGGCCATAAAACAAAAGGGAGATaGGAGACACGGAGAGCAGCT +
Preference number: 5 (lower is better)
Translates to: IACPSVNGGPGLQALWGHKTKGR*ETRRAA
Trigger: AGCTGCTCTCCGTGTCTCCAATCTCCCTTTTGTTTT...ATGGCCCCACAGGGCTTGAAGCCCGGGGCCGCCATTGACAGAGGGACAAGCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000258106.11
ENST00000394111.6
CDS-3UTR CAA 90 bp ACAGGTGAGCATCCTGGTGGGCCCACGACTTCGGACTGGAACCGTCAGCCTTTGGTTAATGAATTACCCTaGACCCCCTCCACCAGTACC +
Preference number: 5 (lower is better)
Translates to: TGEHPGGPTTSDWNRQPLVNELP*TPSTST
Trigger: GGTACTGGTGGAGGGGGTCAAGGGTAATTCATTAAC...CAAAGGCTGACGGTTCCAGTCCGAAGTCGTGGGCCCACCAGGATGCTCACCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000258106.11
CDS-3UTR CAA 90 bp GAGAAGGCCAAGTGGTCCCAGGCCTCAGCCAGCCCATTGCTTGTCCCTCTGTCAAAAACAAAAGGGAGATaGGAGACACGGAGAGCAGCT +
Preference number: 5 (lower is better)
Translates to: EKAKWSQASASPLLVPLSKTKGR*ETRRAA
Trigger: AGCTGCTCTCCGTGTCTCCAATCTCCCTTTTGTTTT...TGACAGAGGGACAAGCAATGGGCTGGCTGAGGCCTGGGACCACTTGGCCTTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258106.11
ENST00000394111.6
CDS-3UTR CAA 90 bp AGCAGCAAGCAGCACTCTGCCCTCGTGGGTTTGTGGTTGCCCACCCTAGTCATTTCTGAAGCTGCGACCTaGTTCCTGAGGTTTCGCGTT +
Preference number: 5 (lower is better)
Translates to: SSKQHSALVGLWLPTLVISEAAT*FLRFRV
Trigger: AACGCGAAACCTCAGGAACAAGGTCGCAGCTTCAGA...AATGACTAGGGTGGGCAACCACAAACCCACGAGGGCAGAGTGCTGCTTGCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394111.6
CDS GCA 90 bp GGGCATGGTTTCATAACTAGGAGGTGGTGTTTATATCAAGAGCAGTaGCTGGACAGCCAGACTATCCCTGGGGGCACAGAACCCGCTGCT +
Preference number: 5 (lower is better)
Translates to: GHGFITRRWCLYQEQ*LDSQTIPGGTEPAA
Trigger: AGCAGCGGGTTCTGTGCCCCCAGGGATAGTCTGGCTGTCCAGGCACTGCTCTTGATATAAACACCACCTCCTAGTTATGAAACCATGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616281.1
CDS-3UTR CAA 90 bp TCTCAATACGTTAAGAAAGACCTGGGCCTGTCCTCCCTCAAGATACAGGATGGCTCTGCCCTCGTGGGTTaGTGGTTGCCCACCCTAGTC +
Preference number: 5 (lower is better)
Translates to: SQYVKKDLGLSSLKIQDGSALVG*WLPTLV
Trigger: GACTAGGGTGGGCAACCACAAACCCACGAGGGCAGA...GCCATCCTGTATCTTGAGGGAGGACAGGCCCAGGTCTTTCTTAACGTATTGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258106.11
CDS TCA 90 bp AAAGACACAGGCCAGGGAGCCAAAGAGAAGTCCTGGAAGTGGATGTaGTCCCCACAAGGCAAAGGACATAATGAGGAGTCAGGGAGAGCA +
Preference number: 5 (lower is better)
Translates to: KDTGQGAKEKSWKWM*SPQGKGHNEESGRA
Trigger: TGCTCTCCCTGACTCCTCATTATGTCCTTTGCCTTGTGGGGATCACATCCACTTCCAGGACTTCTCTTTGGCTCCCTGGCCTGTGTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616281.1
CDS CCA 90 bp TTCCATACAGAGAGGCAGAATGGGCATGGTTTCATAACTAGGAGGTaGTGTTTATATCAAGAGCAGTGCCTGGACAGCCAGACTATCCCT +
Preference number: 5 (lower is better)
Translates to: FHTERQNGHGFITRR*CLYQEQCLDSQTIP
Trigger: AGGGATAGTCTGGCTGTCCAGGCACTGCTCTTGATATAAACACCACCTCCTAGTTATGAAACCATGCCCATTCTGCCTCTCTGTATGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616281.1
CDS TCA 90 bp GAAAGACTTAGGAATGCAGATTTGCTTGTCAGGAAACCTTCATCCTaGCAAGTGGGACAAACAGAAGGGCAGGTGAACACAAGAGCTCAG +
Preference number: 5 (lower is better)
Translates to: ERLRNADLLVRKPSS*QVGQTEGQVNTRAQ
Trigger: CTGAGCTCTTGTGTTCACCTGCCCTTCTGTTTGTCCCACTTGTCAGGATGAAGGTTTCCTGACAAGCAAATCTGCATTCCTAAGTCTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616281.1
CDS CCA 72 bp GCGAGGCAGCCGGGCTCTGGGGAGCGCTCCGCGTCCTaGCGCCGCCGCCTTGCGGGGTGTGCACCCAGCCAG +
Preference number: 6 (lower is better)
Translates to: ARQPGSGERSAS*RRRLAGCAPSQ
Trigger: CTGGCTGGGTGCACACCCCGCAAGGCGGCGGCGCCAGGACGCGGAGCGCTCCCCAGAGCCCGGCTGCCTCGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258106.11
CDS CAA 90 bp GGCAGCCGGGCTCTGGGGAGCGCTCCGCGTCCTGGCGCCGCCGCCTaGCGGGGTGTGCACCCAGCCAGGCACATGCACACCCGCCCGCAC +
Preference number: 6 (lower is better)
Translates to: GSRALGSAPRPGAAA*RGVHPARHMHTRPH
Trigger: GTGCGGGCGGGTGTGCATGTGCCTGGCTGGGTGCACACCCCGCAAGGCGGCGGCGCCAGGACGCGGAGCGCTCCCCAGAGCCCGGCTGCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258106.11
CDS GCA 72 bp GCGCTCCGCGTCCTGGCGCCGCCGCCTTGCGGGGTGTaGACCCAGCCAGGCACATGCACACCCGCCCGCACC +
Preference number: 6 (lower is better)
Translates to: ALRVLAPPPCGV*TQPGTCTPART
Trigger: GGTGCGGGCGGGTGTGCATGTGCCTGGCTGGGTGCACACCCCGCAAGGCGGCGGCGCCAGGACGCGGAGCGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258106.11
CDS CAA 90 bp GAGCCCGCGCCCCCGCCGCCAGTGCCCCCGCCGGTGCCGCCGTCCTaGGCCACCAAGGACTCTATGGTAAAGCCGCGCTTGGCCGCGGGC +
Preference number: 6 (lower is better)
Translates to: EPAPPPPVPPPVPPS*ATKDSMVKPRLAAG
Trigger: GCCCGCGGCCAAGCGCGGCTTTACCATAGAGTCCTTGGTGGCCAAGGACGGCGGCACCGGCGGGGGCACTGGCGGCGGGGGCGCGGGCTC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000258106.11
CDS TCA 72 bp CGAAGGCCGCCTCGGCCGCGCTGGGGTGAGGGTAGTTaGGCGCCGTGGGCCGGAGCGGTTCCTCGGAGGCGG +
Preference number: 6 (lower is better)
Translates to: RRPPRPRWGEGS*APWAGAVPRRR
Trigger: CCGCCTCCGAGGAACCGCTCCGGCCCACGGCGCTCAACTACCCTCACCCCAGCGCGGCCGAGGCGGCCTTCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258106.11
CDS TCA 72 bp GCGCTGCCTGGGCGCGCAGATCTGGGTTGGGCCTCCTaGCGCCCCAAGGCCACGGGGTCCGTGCGCCGCGCA +
Preference number: 6 (lower is better)
Translates to: ALPGRADLGWAS*RPKATGSVRRA
Trigger: TGCGCGGCGCACGGACCCCGTGGCCTTGGGGCGTCAGGAGGCCCAACCCAGATCTGCGCGCCCAGGCAGCGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394111.6
CDS GCA 72 bp GGCTGCAGCGGGGAGGCGCCCAGCTGGTGCGCCGGATaGACGGTCAGCGCGGGGTGGTTCATGGCCTCGGGG +
Preference number: 6 (lower is better)
Translates to: GCSGEAPSWCAG*TVSAGWFMASG
Trigger: CCCCGAGGCCATGAACCACCCCGCGCTGACCGTGCATCCGGCGCACCAGCTGGGCGCCTCCCCGCTGCAGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258106.11
ENST00000473732.1
CDS GCA 72 bp TCCCGGTGCTGGGCGCCGAAGAAGGAGTGCGGGGGCTaGAGCGGGGAGGCGCCCAGCTGGTGCGCCGGATGC +
Preference number: 6 (lower is better)
Translates to: SRCWAPKKECGG*SGEAPSWCAGC
Trigger: GCATCCGGCGCACCAGCTGGGCGCCTCCCCGCTGCAGCCCCCGCACTCCTTCTTCGGCGCCCAGCACCGGGA
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258106.11
ENST00000473732.1
CDS GCA 72 bp CGCGGGGCTGGAAGCAGCTCCAGTGCCCAGACACGGTaGCGCGACCGGCTTGGACCAGGACGGCGGGCCTCG +
Preference number: 6 (lower is better)
Translates to: RGAGSSSSAQTR*RDRLGPGRRAS
Trigger: CGAGGCCCGCCGTCCTGGTCCAAGCCGGTCGCGGCACCGTGTCTGGGCACTGGAGCTGCTTCCAGCCCCGCG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394111.6
CDS GCA 72 bp GTGCAGAAGCAGCCCGTCCTGGGGCACGTCGCTGGCTaGGGCCCCGCCGCCGACGGCAACACACGCAGGTAC +
Preference number: 6 (lower is better)
Translates to: VQKQPVLGHVAG*GPAADGNTRRY
Trigger: GTACCTGCGTGTGTTGCCGTCGGCGGCGGGGCCGCAGCCAGCGACGTGCCCCAGGACGGGCTGCTTCTGCAC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464675.2
CDS CCA 72 bp TTGCGTGCGAAGGGGCCGTGCAGAAGCAGCCCGTCCTaGGGCACGTCGCTGGCATCGGCCTCCTGGGCCGCG +
Preference number: 6 (lower is better)
Translates to: LRAKGPCRSSPS*GTSLASASWAA
Trigger: CGCGGCCCAGGAGGCCGATGCCAGCGACGTGCCCCAGGACGGGCTGCTTCTGCACGGCCCCTTCGCACGCAA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394111.6
CDS CAA 90 bp GTCCATTCTAGCGGCCTGAGCGCTGCCTGGGCGCGCAGATCTGGGTaGGGCCTCCTGACGCCCCAAGGCCACGGGGTCCGTGCGCCGCGC +
Preference number: 6 (lower is better)
Translates to: VHSSGLSAAWARRSG*GLLTPQGHGVRAPR
Trigger: GCGCGGCGCACGGACCCCGTGGCCTTGGGGCGTCAGGAGGCCCAACCCAGATCTGCGCGCCCAGGCAGCGCTCAGGCCGCTAGAATGGAC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394111.6
CDS CAA 90 bp GGGCTGGAAGCAGCTCCAGTGCCCAGACACGGTGCCGCGACCGGCTaGGACCAGGACGGCGGGCCTCGGCACTGGGAGATCCACCCCCTC +
Preference number: 6 (lower is better)
Translates to: GLEAAPVPRHGAATG*DQDGGPRHWEIHPL
Trigger: GAGGGGGTGGATCTCCCAGTGCCGAGGCCCGCCGTCCTGGTCCAAGCCGGTCGCGGCACCGTGTCTGGGCACTGGAGCTGCTTCCAGCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394111.6
CDS TCA 72 bp GCTTCCTCGCCGCTGCCGGGGTCCATTCTAGCGGCCTaGGCGCTGCCTGGGCGCGCAGATCTGGGTTGGGCC +
Preference number: 6 (lower is better)
Translates to: ASSPLPGSILAA*ALPGRADLGWA
Trigger: GGCCCAACCCAGATCTGCGCGCCCAGGCAGCGCTCAGGCCGCTAGAATGGACCCCGGCAGCGGCGAGGAAGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394111.6
CDS GCA 72 bp GTGCGGATCCGCTTGGGCTTGCGTGCGAAGGGGCCGTaGAGAAGCAGCCCGTCCTGGGGCACGTCGCTGGCC +
Preference number: 6 (lower is better)
Translates to: VRIRLGLRAKGP*RSSPSWGTSLA
Trigger: GGCCAGCGACGTGCCCCAGGACGGGCTGCTTCTGCACGGCCCCTTCGCACGCAAGCCCAAGCGGATCCGCAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258106.11
ENST00000473732.1
CDS CCA 72 bp CCCAGCTGGTGCGCCGGATGCACGGTCAGCGCGGGGTaGTTCATGGCCTCGGGGAACACGAGCTCGGGCCCA +
Preference number: 6 (lower is better)
Translates to: PSWCAGCTVSAG*FMASGNTSSGP
Trigger: TGGGCCCGAGCTCGTGTTCCCCGAGGCCATGAACCACCCCGCGCTGACCGTGCATCCGGCGCACCAGCTGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258106.11
ENST00000473732.1
CDS CCA 72 bp GCTGCCGGGGTCCATTCTAGCGGCCTGAGCGCTGCCTaGGCGCGCAGATCTGGGTTGGGCCTCCTGACGCCC +
Preference number: 6 (lower is better)
Translates to: AAGVHSSGLSAA*ARRSGLGLLTP
Trigger: GGGCGTCAGGAGGCCCAACCCAGATCTGCGCGCCCAGGCAGCGCTCAGGCCGCTAGAATGGACCCCGGCAGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394111.6
CDS CCA 72 bp CAGCTCCAGTGCCCAGACACGGTGCCGCGACCGGCTTaGACCAGGACGGCGGGCCTCGGCACTGGGAGATCC +
Preference number: 6 (lower is better)
Translates to: QLQCPDTVPRPA*TRTAGLGTGRS
Trigger: GGATCTCCCAGTGCCGAGGCCCGCCGTCCTGGTCCAAGCCGGTCGCGGCACCGTGTCTGGGCACTGGAGCTG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394111.6
CDS CAA 72 bp GCAGCTCCAGTGCCCAGACACGGTGCCGCGACCGGCTaGGACCAGGACGGCGGGCCTCGGCACTGGGAGATC +
Preference number: 6 (lower is better)
Translates to: AAPVPRHGAATG*DQDGGPRHWEI
Trigger: GATCTCCCAGTGCCGAGGCCCGCCGTCCTGGTCCAAGCCGGTCGCGGCACCGTGTCTGGGCACTGGAGCTGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394111.6
CDS CAA 90 bp TCCAGCCGCAGCAGCTGCGAGGGCGAGAAGGCCGTGCGGATCCGCTaGGGCTTGCGTGCGAAGGGGCCGTGCAGAAGCAGCCCGTCCTGG +
Preference number: 6 (lower is better)
Translates to: SSRSSCEGEKAVRIR*GLRAKGPCRSSPSW
Trigger: CCAGGACGGGCTGCTTCTGCACGGCCCCTTCGCACGCAAGCCCAAGCGGATCCGCACGGCCTTCTCGCCCTCGCAGCTGCTGCGGCTGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000258106.11
ENST00000394111.6
ENST00000464675.2
ENST00000473732.1
ENST00000491023.3
CDS GCA 72 bp CCCTCCAGCTGTTCGCGGGGCTGGAAGCAGCTCCAGTaGCCAGACACGGTGCCGCGACCGGCTTGGACCAGG +
Preference number: 6 (lower is better)
Translates to: PSSCSRGWKQLQ*PDTVPRPAWTR
Trigger: CCTGGTCCAAGCCGGTCGCGGCACCGTGTCTGGGCACTGGAGCTGCTTCCAGCCCCGCGAACAGCTGGAGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394111.6
CDS GCA 72 bp GTGCGGATCCGCTTGGGCTTGCGTGCGAAGGGGCCGTaGAGAAGCAGCCCGTCCTGGGGCACGTCGCTGGCA +
Preference number: 6 (lower is better)
Translates to: VRIRLGLRAKGP*RSSPSWGTSLA
Trigger: TGCCAGCGACGTGCCCCAGGACGGGCTGCTTCTGCACGGCCCCTTCGCACGCAAGCCCAAGCGGATCCGCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394111.6
CDS GCA 72 bp GTGCGGATCCGCTTGGGCTTGCGTGCGAAGGGGCCGTaGAGAAGCAGCCCGTCCTGGGGCACGTCGCTGGCT +
Preference number: 6 (lower is better)
Translates to: VRIRLGLRAKGP*RSSPSWGTSLA
Trigger: AGCCAGCGACGTGCCCCAGGACGGGCTGCTTCTGCACGGCCCCTTCGCACGCAAGCCCAAGCGGATCCGCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464675.2
ENST00000491023.3
CDS CCA 72 bp GGTGCGCCGGATGCACGGTCAGCGCGGGGTGGTTCATaGCCTCGGGGAACACGAGCTCGGGCCCACCGTAGA +
Preference number: 6 (lower is better)
Translates to: GAPDARSARGGS*PRGTRARAHRR
Trigger: TCTACGGTGGGCCCGAGCTCGTGTTCCCCGAGGCCATGAACCACCCCGCGCTGACCGTGCATCCGGCGCACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258106.11
ENST00000473732.1
CDS CCA 72 bp TTGCGTGCGAAGGGGCCGTGCAGAAGCAGCCCGTCCTaGGGCACGTCGCTGGCCTGGAAGCGGTGGCCGAAG +
Preference number: 6 (lower is better)
Translates to: LRAKGPCRSSPS*GTSLAWKRWPK
Trigger: CTTCGGCCACCGCTTCCAGGCCAGCGACGTGCCCCAGGACGGGCTGCTTCTGCACGGCCCCTTCGCACGCAA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258106.11
ENST00000473732.1
CDS CCA 72 bp GCGACCGGCTTGGACCAGGACGGCGGGCCTCGGCACTaGGAGATCCACCCCCTCGCCTTCTCTGAGGCTCTG +
Preference number: 6 (lower is better)
Translates to: ATGLDQDGGPRH*EIHPLAFSEAL
Trigger: CAGAGCCTCAGAGAAGGCGAGGGGGTGGATCTCCCAGTGCCGAGGCCCGCCGTCCTGGTCCAAGCCGGTCGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394111.6
CDS CAA 90 bp CGCGGGCTCCGTGCTAGGCTGCGAGCTGCCAGTAAGGCCCGAGGGTaGAGCTCGTCTCCCTCCTTTCGGAGTCCCGCTGGGACCGACCCC +
Preference number: 6 (lower is better)
Translates to: RGLRARLRAASKARG*SSSPSFRSPAGTDP
Trigger: GGGGTCGGTCCCAGCGGGACTCCGAAAGGAGGGAGACGAGCTCAACCCTCGGGCCTTACTGGCAGCTCGCAGCCTAGCACGGAGCCCGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258106.11
CDS CAA 72 bp AGCAGCTGCGAGGGCGAGAAGGCCGTGCGGATCCGCTaGGGCTTGCGTGCGAAGGGGCCGTGCAGAAGCAGC +
Preference number: 6 (lower is better)
Translates to: SSCEGEKAVRIR*GLRAKGPCRSS
Trigger: GCTGCTTCTGCACGGCCCCTTCGCACGCAAGCCCAAGCGGATCCGCACGGCCTTCTCGCCCTCGCAGCTGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000258106.11
ENST00000394111.6
ENST00000464675.2
ENST00000473732.1
ENST00000491023.3
CDS CCA 72 bp ACTGGGAGATCCACCCCCTCGCCTTCTCTGAGGCTCTaGGGGCTCAAGTGTCGGCGGGCCGGACCAGGTCAG +
Preference number: 6 (lower is better)
Translates to: TGRSTPSPSLRL*GLKCRRAGPGQ
Trigger: CTGACCTGGTCCGGCCCGCCGACACTTGAGCCCCCAGAGCCTCAGAGAAGGCGAGGGGGTGGATCTCCCAGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394111.6
CDS GCA 72 bp ACAGAGCCTGGCCTCGCGCCCTGCTCCCAAGCGCCCTaGCCTCTCCATTCCTTGACACGCACACACACGCCA +
Preference number: 6 (lower is better)
Translates to: TEPGLAPCSQAP*PLHSLTRTHTP
Trigger: TGGCGTGTGTGTGCGTGTCAAGGAATGGAGAGGGCAGGGCGCTTGGGAGCAGGGCGCGAGGCCAGGCTCTGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464675.2
CDS CCA 72 bp AAGGACTCTATGGTAAAGCCGCGCTTGGCCGCGGGCTaGAACATGGTCGCAGCCGCGGGAGCTGTGCGAGGC +
Preference number: 6 (lower is better)
Translates to: KDSMVKPRLAAG*NMVAAAGAVRG
Trigger: GCCTCGCACAGCTCCCGCGGCTGCGACCATGTTCCAGCCCGCGGCCAAGCGCGGCTTTACCATAGAGTCCTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258106.11
CDS CCA 72 bp TTGCGTGCGAAGGGGCCGTGCAGAAGCAGCCCGTCCTaGGGCACGTCGCTGGCTGCTTGCACTAGTCTTGCG +
Preference number: 6 (lower is better)
Translates to: LRAKGPCRSSPS*GTSLAACTSLA
Trigger: CGCAAGACTAGTGCAAGCAGCCAGCGACGTGCCCCAGGACGGGCTGCTTCTGCACGGCCCCTTCGCACGCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491023.3
CDS CAA 72 bp CGTGCTAGGCTGCGAGCTGCCAGTAAGGCCCGAGGGTaGAGCTCGTCTCCCTCCTTTCGGAGTCCCGCTGGG +
Preference number: 6 (lower is better)
Translates to: RARLRAASKARG*SSSPSFRSPAG
Trigger: CCCAGCGGGACTCCGAAAGGAGGGAGACGAGCTCAACCCTCGGGCCTTACTGGCAGCTCGCAGCCTAGCACG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258106.11
CDS TCA 72 bp GTGCTAGGCTGCGAGCTGCCAGTAAGGCCCGAGGGTTaGGCTCGTCTCCCTCCTTTCGGAGTCCCGCTGGGA +
Preference number: 6 (lower is better)
Translates to: VLGCELPVRPEG*ARLPPFGVPLG
Trigger: TCCCAGCGGGACTCCGAAAGGAGGGAGACGAGCTCAACCCTCGGGCCTTACTGGCAGCTCGCAGCCTAGCAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258106.11
CDS TCA 72 bp AGAACACGCCAGCCGTCAGGACACGCAGAAGCAGCCTaGCCTCCCTCGACCTTCACCTTCCACCCGCGACCG +
Preference number: 6 (lower is better)
Translates to: RTRQPSGHAEAA*PPSTFTFHPRP
Trigger: CGGTCGCGGGTGGAAGGTGAAGGTCGAGGGAGGTCAGGCTGCTTCTGCGTGTCCTGACGGCTGGCGTGTTCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394111.6
CDS GCA 72 bp ACCTTCCACCCGCGACCGCGGAACCGCGGACGACTCTaGTCCGGCCAGTTTTTCCGTACGGCGGACGAATTC +
Preference number: 6 (lower is better)
Translates to: TFHPRPRNRGRL*SGQFFRTADEF
Trigger: GAATTCGTCCGCCGTACGGAAAAACTGGCCGGAGCAGAGTCGTCCGCGGTTCCGCGGTCGCGGGTGGAAGGT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394111.6
CDS TCA 72 bp GGCACGTCGCTGGCATCGGCCTCCTGGGCCGCGGTCTaGAGCTGCGACCTTGTTCCTGAGGTTTCGCGTTTT +
Preference number: 6 (lower is better)
Translates to: GTSLASASWAAV*SCDLVPEVSRF
Trigger: AAAACGCGAAACCTCAGGAACAAGGTCGCAGCTTCAGACCGCGGCCCAGGAGGCCGATGCCAGCGACGTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394111.6
CDS CAA 90 bp CGTCGCTGGCATCGGCCTCCTGGGCCGCGGTCTGAAGCTGCGACCTaGTTCCTGAGGTTTCGCGTTTTCTGGATGTCACGGGGGACAGCT +
Preference number: 6 (lower is better)
Translates to: RRWHRPPGPRSEAAT*FLRFRVFWMSRGTA
Trigger: AGCTGTCCCCCGTGACATCCAGAAAACGCGAAACCTCAGGAACAAGGTCGCAGCTTCAGACCGCGGCCCAGGAGGCCGATGCCAGCGACG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394111.6
CDS TCA 72 bp CTCCTGGGCCGCGGTCTGAAGCTGCGACCTTGTTCCTaGGGTTTCGCGTTTTCTGGATGTCACGGGGGACAG +
Preference number: 6 (lower is better)
Translates to: LLGRGLKLRPCS*GFAFSGCHGGQ
Trigger: CTGTCCCCCGTGACATCCAGAAAACGCGAAACCTCAGGAACAAGGTCGCAGCTTCAGACCGCGGCCCAGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394111.6
CDS CCA 72 bp TGCGTGGGTTCCCATGATCTCCCACAGGGCCTAAAGTaGACACCACCCCACGGGCCAGCCCCATGCTCTTTT +
Preference number: 6 (lower is better)
Translates to: CVGSHDLPQGLK*TPPHGPAPCSF
Trigger: AAAAGAGCATGGGGCTGGCCCGTGGGGTGGTGTCCACTTTAGGCCCTGTGGGAGATCATGGGAACCCACGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616281.1
CDS CCA 72 bp GCTGAAGCAAAGGGTACCGGGAGCAAGGCAAGAAGATaGGGCAAAGGGGCTCAGAAGGGGGTGAGTCTGCCC +
Preference number: 6 (lower is better)
Translates to: AEAKGTGSKARR*GKGAQKGVSLP
Trigger: GGGCAGACTCACCCCCTTCTGAGCCCCTTTGCCCCATCTTCTTGCCTTGCTCCCGGTACCCTTTGCTTCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616281.1
CDS CAA 72 bp CATCGGCCTCCTGGGCCGCGGTCTGAAGCTGCGACCTaGTTCCTGAGGTTTCGCGTTTTCTGGATGTCACGG +
Preference number: 6 (lower is better)
Translates to: HRPPGPRSEAAT*FLRFRVFWMSR
Trigger: CCGTGACATCCAGAAAACGCGAAACCTCAGGAACAAGGTCGCAGCTTCAGACCGCGGCCCAGGAGGCCGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394111.6
CDS TCA 72 bp TTGGCCTGCTTCGTGGCAATGCGCCACCGGTTGATGTaGTGGGAGCCCTTCTTCTTCTGCTCGGACTCAGGC +
Preference number: 6 (lower is better)
Translates to: LACFVAMRHRLM*WEPFFFCSDSG
Trigger: GCCTGAGTCCGAGCAGAAGAAGAAGGGCTCCCATCACATCAACCGGTGGCGCATTGCCACGAAGCAGGCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000258106.11
ENST00000394111.6
ENST00000464675.2
ENST00000491023.3
ENST00000616281.1
CDS TCA 72 bp CCCCATTGGCCTGCTTCGTGGCAATGCGCCACCGGTTaGTGTGATGGGAGCCCTTCTTCTTCTGCTCGGACT +
Preference number: 6 (lower is better)
Translates to: PHWPASWQCATG*CDGSPSSSART
Trigger: AGTCCGAGCAGAAGAAGAAGGGCTCCCATCACATCAACCGGTGGCGCATTGCCACGAAGCAGGCCAATGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000258106.11
ENST00000394111.6
ENST00000464675.2
ENST00000491023.3
ENST00000616281.1
CDS CAA 72 bp CAGGGAGCAGGTGAACCCAACAGGAAGTGGTTGAGTTaGGCCACAAGGGGGTGGCCAGTGACTGTGGTTGGT +
Preference number: 6 (lower is better)
Translates to: QGAGEPNRKWLS*ATRGWPVTVVG
Trigger: ACCAACCACAGTCACTGGCCACCCCCTTGTGGCCAAACTCAACCACTTCCTGTTGGGTTCACCTGCTCCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616281.1
CDS TCA 72 bp ACCAGGTCAGGGCCTCGGAGACACTGTGGCTTAAATTaGAGCTGGCCAAGTAGCCCGAGCCCATCTCAAGAG +
Preference number: 6 (lower is better)
Translates to: TRSGPRRHCGLN*SWPSSPSPSQE
Trigger: CTCTTGAGATGGGCTCGGGCTACTTGGCCAGCTTCAATTTAAGCCACAGTGTCTCCGAGGCCCTGACCTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394111.6
CDS TCA 72 bp AATGAGAGAGCCTATGACCCACTGCGTGGGTTCCCATaGTCTCCCACAGGGCCTAAAGTGGACACCACCCCA +
Preference number: 6 (lower is better)
Translates to: NERAYDPLRGFP*SPTGPKVDTTP
Trigger: TGGGGTGGTGTCCACTTTAGGCCCTGTGGGAGATCATGGGAACCCACGCAGTGGGTCATAGGCTCTCTCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616281.1
CDS TCA 72 bp TTTGGCCACAAGGGGGTGGCCAGTGACTGTGGTTGGTaGCTGTCATTAGCACCGGCAGAATGGTGGCATGGA +
Preference number: 6 (lower is better)
Translates to: FGHKGVASDCGW*LSLAPAEWWHG
Trigger: TCCATGCCACCATTCTGCCGGTGCTAATGACAGTCACCAACCACAGTCACTGGCCACCCCCTTGTGGCCAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616281.1
CDS CCA 72 bp CAGCAAAGCCAAGCCAAGGTGGAGGAGTGCAGGCTCTaGAAGCCGGCAGACATGGGACTCTACGAGTTTCTA +
Preference number: 6 (lower is better)
Translates to: QQSQAKVEECRL*KPADMGLYEFL
Trigger: TAGAAACTCGTAGAGTCCCATGTCTGCCGGCTTCCAGAGCCTGCACTCCTCCACCTTGGCTTGGCTTTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616281.1
CDS CAA 72 bp CATTCCTTGACACGCACACACACGCCATTTCTCCCTTaGCCCTTTTGCCGCCCCTTCCCTAAGTCCACTCCC +
Preference number: 6 (lower is better)
Translates to: HSLTRTHTPFLP*PFCRPFPKSTP
Trigger: GGGAGTGGACTTAGGGAAGGGGCGGCAAAAGGGCAAAGGGAGAAATGGCGTGTGTGTGCGTGTCAAGGAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464675.2
CDS CCA 72 bp TGTTTGTCGAGGTGGGTGATCCTGGAGAAGCACAGATaGGTAGGTGCGTCCGGCTGTGGATGTATGGGCTTT +
Preference number: 6 (lower is better)
Translates to: CLSRWVILEKHR*VGASGCGCMGF
Trigger: AAAGCCCATACATCCACAGCCGGACGCACCTACCCATCTGTGCTTCTCCAGGATCACCCACCTCGACAAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616281.1
CDS CAA 72 bp CAACATGGAGGGCCTCCTTTGAAGTGGACCTCATCCTaGACATTCACAGAAACCTCCCTAGAGGAGCAGGGC +
Preference number: 6 (lower is better)
Translates to: QHGGPPLKWTSS*TFTETSLEEQG
Trigger: GCCCTGCTCCTCTAGGGAGGTTTCTGTGAATGTCAAGGATGAGGTCCACTTCAAAGGAGGCCCTCCATGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616281.1
CDS TCA 72 bp GGCCAGGGAGCCAAAGAGAAGTCCTGGAAGTGGATGTaGTCCCCACAAGGCAAAGGACATAATGAGGAGTCA +
Preference number: 6 (lower is better)
Translates to: GQGAKEKSWKWM*SPQGKGHNEES
Trigger: TGACTCCTCATTATGTCCTTTGCCTTGTGGGGATCACATCCACTTCCAGGACTTCTCTTTGGCTCCCTGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616281.1
CDS CAA 72 bp GGCTGGGTCTCTGACATCTTTCCAGTGAGTTCCACATaGATCAAGCACCCGACATTCCAGGTGGGAAGAACA +
Preference number: 6 (lower is better)
Translates to: GWVSDIFPVSST*IKHPTFQVGRT
Trigger: TGTTCTTCCCACCTGGAATGTCGGGTGCTTGATCAATGTGGAACTCACTGGAAAGATGTCAGAGACCCAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616281.1
CDS GCA 72 bp TTCATAACTAGGAGGTGGTGTTTATATCAAGAGCAGTaGCTGGACAGCCAGACTATCCCTGGGGGCACAGAA +
Preference number: 6 (lower is better)
Translates to: FITRRWCLYQEQ*LDSQTIPGGTE
Trigger: TTCTGTGCCCCCAGGGATAGTCTGGCTGTCCAGGCACTGCTCTTGATATAAACACCACCTCCTAGTTATGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616281.1
CDS TCA 72 bp AGGAATGCAGATTTGCTTGTCAGGAAACCTTCATCCTaGCAAGTGGGACAAACAGAAGGGCAGGTGAACACA +
Preference number: 6 (lower is better)
Translates to: RNADLLVRKPSS*QVGQTEGQVNT
Trigger: TGTGTTCACCTGCCCTTCTGTTTGTCCCACTTGTCAGGATGAAGGTTTCCTGACAAGCAAATCTGCATTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616281.1
CDS TCA 72 bp AGGAGAGATCATAATCGCTTCTTCACAGAGTGGATGTaGGTAGTAAATGAGAGAGCCTATGACCCACTGCGT +
Preference number: 6 (lower is better)
Translates to: RRDHNRFFTEWM*VVNERAYDPLR
Trigger: ACGCAGTGGGTCATAGGCTCTCTCATTTACTACTCACATCCACTCTGTGAAGAAGCGATTATGATCTCTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616281.1