Pregenerated sensors for EMSLR (Homo sapiens)
Ensembl gene IDs: ENSG00000232445Ensembl transcript IDs: ENST00000419422.2, ENST00000663483.1
Found 17 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | ATCCTGTACACCTGGCTCTGCCTTCCTTTCCCCGCGCGCGGGAGCTaGAGGCCGTCCCCGCCGATCCAATTTCTCCGCGCAGGCTGCCTG | + |
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Preference number: 5 (lower is better) Translates to: ILYTWLCLPFPARGS*RPSPPIQFLRAGCL Trigger: CAGGCAGCCTGCGCGGAGAAATTGGATCGGCGGGGACGGCCTGCAGCTCCCGCGCGCGGGGAAAGGAAGGCAGAGCCAGGTGTACAGGAT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000419422.2 |
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| CDS GCA 90 bp | TTTCATTCCTTGATTCACCCAACAAATACCGACTGGCTGAGCACCTaGTGTGTGTGCACTGCTGTTCTAGCTGCTGACCATAGACAGCAT | + |
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Preference number: 5 (lower is better) Translates to: FHSLIHPTNTDWLST*CVCTAVLAADHRQH Trigger: ATGCTGTCTATGGTCAGCAGCTAGAACAGCAGTGCACACACAGCAGGTGCTCAGCCAGTCGGTATTTGTTGGGTGAATCAAGGAATGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000663483.1 |
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| CDS GCA 90 bp | CACTTCCTTGCTTTTTCACGTTTCCCGTGTCCTTCCATTGAGATCTaGACATCCTGTGTAAATTGCTTCTTCCAAGTTTGTGAATTTGCT | + |
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Preference number: 5 (lower is better) Translates to: HFLAFSRFPCPSIEI*TSCVNCFFQVCEFA Trigger: AGCAAATTCACAAACTTGGAAGAAGCAATTTACACAGGATGTGCAGATCTCAATGGAAGGACACGGGAAACGTGAAAAAGCAAGGAAGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000419422.2 ENST00000663483.1 |
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| CDS CCA 90 bp | TTCTTCAGTTCCACATTTGCCATGTGCTCTGGAAAACTCTGTATCTaGTTGGTAAATACCTCAACCATATCCAGAATTGCTGTTGACATT | + |
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Preference number: 5 (lower is better) Translates to: FFSSTFAMCSGKLCI*LVNTSTISRIAVDI Trigger: AATGTCAACAGCAATTCTGGATATGGTTGAGGTATTTACCAACCAGATACAGAGTTTTCCAGAGCACATGGCAAATGTGGAACTGAAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000419422.2 ENST00000663483.1 |
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| CDS GCA 90 bp | CTTTGTATTTCATCCAGTGATTTCTTCAGTTCCACATTTGCCATGTaGTCTGGAAAACTCTGTATCTGGTTGGTAAATACCTCAACCATA | + |
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Preference number: 5 (lower is better) Translates to: LCISSSDFFSSTFAM*SGKLCIWLVNTSTI Trigger: TATGGTTGAGGTATTTACCAACCAGATACAGAGTTTTCCAGAGCACATGGCAAATGTGGAACTGAAGAAATCACTGGATGAAATACAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000419422.2 ENST00000663483.1 |
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| CDS GCA 72 bp | CCCGCCGATCCAATTTCTCCGCGCAGGCTGCCTGGGTaGCTCTGCTCCGCTCCTCGGGCTCCCCGTGGCTTC | + |
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Preference number: 6 (lower is better) Translates to: PADPISPRRLPG*LCSAPRAPRGF Trigger: GAAGCCACGGGGAGCCCGAGGAGCGGAGCAGAGGCACCCAGGCAGCCTGCGCGGAGAAATTGGATCGGCGGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000419422.2 ENST00000663483.1 |
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| CDS GCA 72 bp | ACCTGGCTCTGCCTTCCTTTCCCCGCGCGCGGGAGCTaGAGGCCGTCCCCGCCGATCCAATTTCTCCGCGCA | + |
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Preference number: 6 (lower is better) Translates to: TWLCLPFPARGS*RPSPPIQFLRA Trigger: TGCGCGGAGAAATTGGATCGGCGGGGACGGCCTGCAGCTCCCGCGCGCGGGGAAAGGAAGGCAGAGCCAGGT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000419422.2 |
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| CDS GCA 72 bp | GATCCAATTTCTCCGCGCAGGCTGCCTGGGTGCCTCTaGTCCGCTCCTCGGGCTCCCCGTGGCTTCTCGGCT | + |
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Preference number: 6 (lower is better) Translates to: DPISPRRLPGCL*SAPRAPRGFSA Trigger: AGCCGAGAAGCCACGGGGAGCCCGAGGAGCGGAGCAGAGGCACCCAGGCAGCCTGCGCGGAGAAATTGGATC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000419422.2 ENST00000663483.1 |
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| CDS GCA 72 bp | GTAGGGGAGGACTTCTTCCATCTCCCTGTGATGCTGTaGTTCAGTGGTCACGCTCGTAGTCCGCCTTCATGT | + |
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Preference number: 6 (lower is better) Translates to: VGEDFFHLPVML*FSGHARSPPSC Trigger: ACATGAAGGCGGACTACGAGCGTGACCACTGAAGCACAGCATCACAGGGAGATGGAAGAAGTCCTCCCCTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000419422.2 |
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| CDS CCA 72 bp | ATGGGGATCTGTTGCTGGAGAATTACTGGGTTCCTTTaGAGGCGTCCCACTTCCTTGCTTTTTCACGTTTCC | + |
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Preference number: 6 (lower is better) Translates to: MGICCWRITGFL*RRPTSLLFHVS Trigger: GGAAACGTGAAAAAGCAAGGAAGTGGGACGCCTCCAAAGGAACCCAGTAATTCTCCAGCAACAGATCCCCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000419422.2 ENST00000663483.1 |
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| CDS CCA 72 bp | CATTTCTTGAATTTCTTTTGGATGGGGATCTGTTGCTaGAGAATTACTGGGTTCCTTTGGAGGCGTCCCACT | + |
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Preference number: 6 (lower is better) Translates to: HFLNFFWMGICC*RITGFLWRRPT Trigger: AGTGGGACGCCTCCAAAGGAACCCAGTAATTCTCCAGCAACAGATCCCCATCCAAAAGAAATTCAAGAAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000419422.2 ENST00000663483.1 |
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| CDS TCA 72 bp | CTTCCTTGCTTTTTCACGTTTCCCGTGTCCTTCCATTaGGATCTGCACATCCTGTGTAAATTGCTTCTTCCA | + |
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Preference number: 6 (lower is better) Translates to: LPCFFTFPVSFH*DLHILCKLLLP Trigger: TGGAAGAAGCAATTTACACAGGATGTGCAGATCTCAATGGAAGGACACGGGAAACGTGAAAAAGCAAGGAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000419422.2 ENST00000663483.1 |
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| CDS CAA 72 bp | ATGACATTTCTTGAATTTCTTTTGGATGGGGATCTGTaGCTGGAGAATTACTGGGTTCCTTTGGAGGCGTCC | + |
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Preference number: 6 (lower is better) Translates to: MTFLEFLLDGDL*LENYWVPLEAS Trigger: GGACGCCTCCAAAGGAACCCAGTAATTCTCCAGCAACAGATCCCCATCCAAAAGAAATTCAAGAAATGTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000419422.2 ENST00000663483.1 |
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| CDS CAA 90 bp | ATTCTCTATATGACATTTCTTGAATTTCTTTTGGATGGGGATCTGTaGCTGGAGAATTACTGGGTTCCTTTGGAGGCGTCCCACTTCCTT | + |
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Preference number: 6 (lower is better) Translates to: ILYMTFLEFLLDGDL*LENYWVPLEASHFL Trigger: AAGGAAGTGGGACGCCTCCAAAGGAACCCAGTAATTCTCCAGCAACAGATCCCCATCCAAAAGAAATTCAAGAAATGTCATATAGAGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000419422.2 ENST00000663483.1 |
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| CDS CAA 90 bp | TTCAGTTCCACATTTGCCATGTGCTCTGGAAAACTCTGTATCTGGTaGGTAAATACCTCAACCATATCCAGAATTGCTGTTGACATTTCC | + |
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Preference number: 6 (lower is better) Translates to: FSSTFAMCSGKLCIW*VNTSTISRIAVDIS Trigger: GGAAATGTCAACAGCAATTCTGGATATGGTTGAGGTATTTACCAACCAGATACAGAGTTTTCCAGAGCACATGGCAAATGTGGAACTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000419422.2 ENST00000663483.1 |
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| CDS CAA 72 bp | ACATTTGCCATGTGCTCTGGAAAACTCTGTATCTGGTaGGTAAATACCTCAACCATATCCAGAATTGCTGTT | + |
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Preference number: 6 (lower is better) Translates to: TFAMCSGKLCIW*VNTSTISRIAV Trigger: AACAGCAATTCTGGATATGGTTGAGGTATTTACCAACCAGATACAGAGTTTTCCAGAGCACATGGCAAATGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000419422.2 ENST00000663483.1 |
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| CDS CAA 90 bp | AAATCAGTTTCCACAATTCTCTATATGACATTTCTTGAATTTCTTTaGGATGGGGATCTGTTGCTGGAGAATTACTGGGTTCCTTTGGAG | + |
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Preference number: 6 (lower is better) Translates to: KSVSTILYMTFLEFL*DGDLLLENYWVPLE Trigger: CTCCAAAGGAACCCAGTAATTCTCCAGCAACAGATCCCCATCCAAAAGAAATTCAAGAAATGTCATATAGAGAATTGTGGAAACTGATTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000419422.2 ENST00000663483.1 |
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