Pregenerated sensors for EMP3 (Homo sapiens)
Ensembl gene IDs: ENSG00000142227Ensembl transcript IDs: ENST00000270221.11, ENST00000593437.1, ENST00000596315.5, ENST00000597057.1, ENST00000597279.5, ENST00000597529.1, ENST00000599255.5, ENST00000599704.5
Found 56 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | GCGGGGGCAGCCGAGCGAGGCGGGGCGCTCACTCCCGCTTCCGTAGGTGGATGTGCTGGCAGAGGCCGGTaGCATAGAAGAGACCTCCTC | + |
|
Preference number: 2 (lower is better) Translates to: AGAAERGGALTPASVGGCAGRGR*HRRDLL Trigger: GAGGAGGTCTCTTCTATGCCACCGGCCTCTGCCAGC...ACATCCACCTACGGAAGCGGGAGTGAGCGCCCCGCCTCGCTCGGCTGCCCCCGC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000599255.5 |
||
| 3UTR-3UTR TCA 90 bp | GAAGCAGTATCCGAAGCTGCCCCCTCGCGGGTGCTTCTCCAGGATCTCCTCGGCGCCAGCCTTCCCCTTTaGAGACCAGTCCCGCCGCCC | + |
|
Preference number: 2 (lower is better) Translates to: EAVSEAAPSRVLLQDLLGASLPL*RPVPPP Trigger: GGGCGGCGGGACTGGTCTTCAAAGGGGAAGGCTGGC...GCCGAGGAGATCCTGGAGAAGCACCCGCGAGGGGGCAGCTTCGGATACTGCTTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000599255.5 |
||
| 3UTR-3UTR GCA 90 bp | CGAAGCTGCCCCCTCGCGGGTGCTTCTCCAGGATCTCCTCGGCGTGAATGGCATACACCGCCACGCTGGTaGAAAGCTGGCAGAGGCCGG | + |
|
Preference number: 2 (lower is better) Translates to: RSCPLAGASPGSPRREWHTPPRW*KAGRGR Trigger: CCGGCCTCTGCCAGCTTTGCACCAGCGTGGCGGTGT...ATGCCATTCACGCCGAGGAGATCCTGGAGAAGCACCCGCGAGGGGGCAGCTTCG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000599255.5 |
||
| 3UTR-3UTR GCA 90 bp | GGCGTGAATGGCATAGATCAAGGCGCCAGTAAACACCGCCACGCTGGTGCAAAGAGCACCATGAGGACCTaGACCGCCTTCAGCCAGCCT | + |
|
Preference number: 2 (lower is better) Translates to: GVNGIDQGASKHRHAGAKSTMRT*TAFSQP Trigger: AGGCTGGCTGAAGGCGGTGCAGGTCCTCATGGTGCT...CTTTGCACCAGCGTGGCGGTGTTTACTGGCGCCTTGATCTATGCCATTCACGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000599255.5 |
||
| 3UTR GCA 72 bp | AGGCCACCCAGGCCAGGGCGAAGCAGTATCCGAAGCTaGCCCCTCGCGGGTGCTTCTCCAGGATCTCCTCGG | + |
|
Preference number: 3 (lower is better) Translates to: RPPRPGRSSIRS*PLAGASPGSPR Trigger: CCGAGGAGATCCTGGAGAAGCACCCGCGAGGGGGCAGCTTCGGATACTGCTTCGCCCTGGCCTGGGTGGCCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000599255.5 |
||
| 3UTR-3UTR CAA 90 bp | AGTATCCGAAGCTGCCCCCTCGCGGGTGCTTCTCCAGGATCTCCTCGGCGTGAAAGCCAGCCTTCCCCTTaGAAGACCAGTCCCGCCGCC | + |
|
Preference number: 3 (lower is better) Translates to: SIRSCPLAGASPGSPRRESQPSP*KTSPAA Trigger: GGCGGCGGGACTGGTCTTCAAAGGGGAAGGCTGGCT...TTCACGCCGAGGAGATCCTGGAGAAGCACCCGCGAGGGGGCAGCTTCGGATACT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000599255.5 |
||
| 3UTR CCA 72 bp | ACACCGCCACGCTGGTGCAAAGCTGGCAGAGGCCGGTaGCATAGAAGAGACCTCCTCGTCGCATGGTGTAGA | + |
|
Preference number: 3 (lower is better) Translates to: TPPRWCKAGRGR*HRRDLLVAWCR Trigger: TCTACACCATGCGACGAGGAGGTCTCTTCTATGCCACCGGCCTCTGCCAGCTTTGCACCAGCGTGGCGGTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000599255.5 |
||
| CDS-3UTR TCA 90 bp | GCGGGGGCAGCCGAGCGAGGCGGGGCGCTCACTCCCGCTTCCGTAGGTGGATGTATAAGAATGAGGATGTaGAGGGCTGAGACCACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: AGAAERGGALTPASVGGCIRMRM*RAETTS Trigger: GCTGGTGGTCTCAGCCCTTCACATCCTCATTCTTAT...ACATCCACCTACGGAAGCGGGAGTGAGCGCCCCGCCTCGCTCGGCTGCCCCCGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000599255.5 |
||
| CDS-3UTR GCA 90 bp | GGCAGAGGCCGGTGGCATAGAAGAGACCTCCTCGTCGCATGGTGTAGAGCTGGAACACCGCCACGCTGGTaGAAAGCTGGCAGAGGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: GRGRWHRRDLLVAWCRAGTPPRW*KAGRGR Trigger: CCGGCCTCTGCCAGCTTTGCACCAGCGTGGCGGTGT...TCCAGCTCTACACCATGCGACGAGGAGGTCTCTTCTATGCCACCGGCCTCTGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000599255.5 |
||
| CDS-3UTR GCA 90 bp | GGGCGAAGCAGTATCCGAAGCTGCCCCCTCGCGGGTGCTTCTCCAGGATCTCCTAGCACCATGAGGACCTaGACCGCCTTCAGCCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: GRSSIRSCPLAGASPGSPSTMRT*TAFSQP Trigger: AGGCTGGCTGAAGGCGGTGCAGGTCCTCATGGTGCT...AGGAGATCCTGGAGAAGCACCCGCGAGGGGGCAGCTTCGGATACTGCTTCGCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000599255.5 |
||
| CDS-3UTR CCA 90 bp | GAAGCAGTATCCGAAGCTGCCCCCTCGCGGGTGCTTCTCCAGGATCTCCTCGGCGCTGGCAGAGGCCGGTaGCATAGAAGAGACCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: EAVSEAAPSRVLLQDLLGAGRGR*HRRDLL Trigger: GAGGAGGTCTCTTCTATGCCACCGGCCTCTGCCAGC...GCCGAGGAGATCCTGGAGAAGCACCCGCGAGGGGGCAGCTTCGGATACTGCTTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000599255.5 |
||
| CDS-3UTR TCA 90 bp | CGAAGCTGCCCCCTCGCGGGTGCTTCTCCAGGATCTCCTCGGCGTGAATGGCATGAGGATGTGAAGGGCTaGGACCACCAGCAAGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: RSCPLAGASPGSPRREWHEDVKG*DHQQEE Trigger: CTCCTCTTGCTGGTGGTCTCAGCCCTTCACATCCTC...ATGCCATTCACGCCGAGGAGATCCTGGAGAAGCACCCGCGAGGGGGCAGCTTCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000599255.5 |
||
| CDS-3UTR TCA 90 bp | AGAGGCCGGTGGCATAGAAGAGACCTCCTCGTCGCATGGTGTAGAGCTGGAACAGCCAGCCTTCCCCTTTaGAGACCAGTCCCGCCGCCC | + |
|
Preference number: 4 (lower is better) Translates to: RGRWHRRDLLVAWCRAGTASLPL*RPVPPP Trigger: GGGCGGCGGGACTGGTCTTCAAAGGGGAAGGCTGGC...TGTTCCAGCTCTACACCATGCGACGAGGAGGTCTCTTCTATGCCACCGGCCTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000599255.5 |
||
| CDS-3UTR GCA 90 bp | AGTATCCGAAGCTGCCCCCTCGCGGGTGCTTCTCCAGGATCTCCTCGGCGTGAAAGCAGTATCCGAAGCTaGCCCCTCGCGGGTGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SIRSCPLAGASPGSPRRESSIRS*PLAGAS Trigger: AGAAGCACCCGCGAGGGGGCAGCTTCGGATACTGCT...TTCACGCCGAGGAGATCCTGGAGAAGCACCCGCGAGGGGGCAGCTTCGGATACT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000599255.5 |
||
| CDS-3UTR TCA 90 bp | GGGCGAAGCAGTATCCGAAGCTGCCCCCTCGCGGGTGCTTCTCCAGGATCTCCTCCTCACCATTCTCGCTaGCATTACTGCAGGCCCATG | + |
|
Preference number: 4 (lower is better) Translates to: GRSSIRSCPLAGASPGSPPHHSR*HYCRPM Trigger: CATGGGCCTGCAGTAATGTCAGCGAGAATGGTGAGG...AGGAGATCCTGGAGAAGCACCCGCGAGGGGGCAGCTTCGGATACTGCTTCGCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000599255.5 |
||
| CDS-3UTR GCA 90 bp | AGAGGCCGGTGGCATAGAAGAGACCTCCTCGTCGCATGGTGTAGAGCTGGAACACTGCCCCCTCGCGGGTaGTTCTCCAGGATCTCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: RGRWHRRDLLVAWCRAGTLPPRG*FSRISS Trigger: CGAGGAGATCCTGGAGAAGCACCCGCGAGGGGGCAG...TGTTCCAGCTCTACACCATGCGACGAGGAGGTCTCTTCTATGCCACCGGCCTCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000599255.5 |
||
| CDS-3UTR CCA 90 bp | CCCTCGCGGGTGCTTCTCCAGGATCTCCTCGGCGTGAATGGCATAGATCAAGGCGTGACATGGCTGCAGTaGAAGCCGAGAGCCGCGAAA | + |
|
Preference number: 4 (lower is better) Translates to: PSRVLLQDLLGVNGIDQGVTWLQ*KPRAAK Trigger: TTTCGCGGCTCTCGGCTTCCACTGCAGCCATGTCAC...GCCTTGATCTATGCCATTCACGCCGAGGAGATCCTGGAGAAGCACCCGCGAGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000599255.5 |
||
| CDS-3UTR TCA 90 bp | GGCGTGAATGGCATAGATCAAGGCGCCAGTAAACACCGCCACGCTGGTGCAAAGCACCAGCAAGAGGAGTaGCATGGCTGCAGTGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: GVNGIDQGASKHRHAGAKHQQEE*HGCSGS Trigger: GCTTCCACTGCAGCCATGTCACTCCTCTTGCTGGTG...CTTTGCACCAGCGTGGCGGTGTTTACTGGCGCCTTGATCTATGCCATTCACGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000599255.5 |
||
| CDS-3UTR CCA 90 bp | GGCGTGAATGGCATAGATCAAGGCGCCAGTAAACACCGCCACGCTGGTGCAAAGGCAAGAGGAGTGACATaGCTGCAGTGGAAGCCGAGA | + |
|
Preference number: 4 (lower is better) Translates to: GVNGIDQGASKHRHAGAKARGVT*LQWKPR Trigger: TCTCGGCTTCCACTGCAGCCATGTCACTCCTCTTGC...CTTTGCACCAGCGTGGCGGTGTTTACTGGCGCCTTGATCTATGCCATTCACGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000599255.5 |
||
| CDS-3UTR CCA 90 bp | AGAGGCCGGTGGCATAGAAGAGACCTCCTCGTCGCATGGTGTAGAGCTGGAACATCTCCTCGGCGTGAATaGCATAGATCAAGGCGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RGRWHRRDLLVAWCRAGTSPRRE*HRSRRQ Trigger: CTGGCGCCTTGATCTATGCCATTCACGCCGAGGAGA...TGTTCCAGCTCTACACCATGCGACGAGGAGGTCTCTTCTATGCCACCGGCCTCT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000599255.5 |
||
| CDS-3UTR GCA 90 bp | CCCTCGCGGGTGCTTCTCCAGGATCTCCTCGGCGTGAATGGCATAGATCAAGGCTGTCGTTGTTCCACGTaGAGTCGTACCAGAGATTCA | + |
|
Preference number: 4 (lower is better) Translates to: PSRVLLQDLLGVNGIDQGCRCST*SRTRDS Trigger: TGAATCTCTGGTACGACTGCACGTGGAACAACGACA...GCCTTGATCTATGCCATTCACGCCGAGGAGATCCTGGAGAAGCACCCGCGAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000599255.5 |
||
| CDS-3UTR CCA 90 bp | AGAGGCCGGTGGCATAGAAGAGACCTCCTCGTCGCATGGTGTAGAGCTGGAACATGCAGGCCCATGTTTTaGTGTCGTTGTTCCACGTGC | + |
|
Preference number: 4 (lower is better) Translates to: RGRWHRRDLLVAWCRAGTCRPMF*CRCSTC Trigger: GCACGTGGAACAACGACACCAAAACATGGGCCTGCA...TGTTCCAGCTCTACACCATGCGACGAGGAGGTCTCTTCTATGCCACCGGCCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000599255.5 |
||
| CDS GCA 90 bp | CGCCCTCCAGCGCGCGGACGTGGTAGGCGGCCAAGCGTTTTTGGCTaGTTCCCGGGAAGCCGTTGGTCGCGCTTGCGTAGTGAACCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: RPPARGRGRRPSVFG*FPGSRWSRLRSEPL Trigger: CAGCGGTTCACTACGCAAGCGCGACCAACGGCTTCCCGGGAAGCAGCCAAAAACGCTTGGCCGCCTACCACGTCCGCGCGCTGGAGGGCG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000599704.5 |
||
| CDS TCA 90 bp | GCTGCTTCCCGGGAAGCCGTTGGTCGCGCTTGCGTAGTGAACCGCTaGGGCTGTGTTGAGCGCTCCTTCTCCGCGCAACTCCCGGCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: AASREAVGRACVVNR*GCVERSFSAQLPAS Trigger: CGAAGCCGGGAGTTGCGCGGAGAAGGAGCGCTCAACACAGCCTCAGCGGTTCACTACGCAAGCGCGACCAACGGCTTCCCGGGAAGCAGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000599704.5 |
||
| CDS-3UTR CAA 90 bp | GCGAAGCAGTATCCGAAGCTGCCCCCTCGCGGGTGCTTCTCCAGGATCTCCTCGAGCCAGCCTTCCCCTTaGAAGACCAGTCCCGCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: AKQYPKLPPRGCFSRISSSQPSP*KTSPAA Trigger: GGCGGCGGGACTGGTCTTCAAAGGGGAAGGCTGGCT...CGAGGAGATCCTGGAGAAGCACCCGCGAGGGGGCAGCTTCGGATACTGCTTCGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000599255.5 |
||
| CDS TCA 90 bp | GGAAGCCGTTGGTCGCGCTTGCGTAGTGAACCGCTGAGGCTGTGTTaGGCGCTCCTTCTCCGCGCAACTCCCGGCTTCGACACCGCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: GSRWSRLRSEPLRLC*ALLLRATPGFDTAF Trigger: GAAGGCGGTGTCGAAGCCGGGAGTTGCGCGGAGAAGGAGCGCTCAACACAGCCTCAGCGGTTCACTACGCAAGCGCGACCAACGGCTTCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000599704.5 |
||
| CDS GCA 90 bp | AATGAGGGAGAGCACCATGAGGACCTGCACCGCCTTCAGCCAGCCTaGAGTAAGGAGGACACAGAGGGGGACATCACCGTGGGTCCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: NEGEHHEDLHRLQPA*SKEDTEGDITVGPE Trigger: CTCTGGACCCACGGTGATGTCCCCCTCTGTGTCCTCCTTACTGCAGGCTGGCTGAAGGCGGTGCAGGTCCTCATGGTGCTCTCCCTCATT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000597057.1 |
||
| CDS CCA 90 bp | ACAGGCGGGACATGCATTAGCCCTAGGCACTCAGCCACTCAGGCCTaGACCCCGCCCACTCCAACTTTGTTGGGGGAGGGTTCCCAATTC | + |
|
Preference number: 5 (lower is better) Translates to: TGGTCISPRHSATQA*TPPTPTLLGEGSQF Trigger: GAATTGGGAACCCTCCCCCAACAAAGTTGGAGTGGGCGGGGTCCAGGCCTGAGTGGCTGAGTGCCTAGGGCTAATGCATGTCCCGCCTGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000597529.1 |
||
| CDS CCA 90 bp | CTTAAGACCGGCACCTCTCGGGCTCCGTCTTGTAGGACCTCGGCCTaGCTTCGAGGGCTTCCATACAGGTCACCGCAGGCTCTTTCAACT | + |
|
Preference number: 5 (lower is better) Translates to: LKTGTSRAPSCRTSA*LRGLPYRSPQALST Trigger: AGTTGAAAGAGCCTGCGGTGACCTGTATGGAAGCCCTCGAAGCCAGGCCGAGGTCCTACAAGACGGAGCCCGAGAGGTGCCGGTCTTAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000599704.5 |
||
| CDS TCA 90 bp | CCTTTGAAGACCAGTCCCGCCGCCCTCACCCCTCACCATTCTCGCTaGCATTACTGCAGGCCCATGTTTTGGTGTCGTTGTTCCACGTGC | + |
|
Preference number: 5 (lower is better) Translates to: PLKTSPAALTPHHSR*HYCRPMFWCRCSTC Trigger: GCACGTGGAACAACGACACCAAAACATGGGCCTGCAGTAATGTCAGCGAGAATGGTGAGGGGTGAGGGCGGCGGGACTGGTCTTCAAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000597529.1 ENST00000599255.5 |
||
| CDS-3UTR CAA 90 bp | CCCTCGCGGGTGCTTCTCCAGGATCTCCTCGGCGTGAATGGCATAGATCAAGGCAGAGTCCACCAGGACTaGTCCAAAGTGGCCACGAAA | + |
|
Preference number: 5 (lower is better) Translates to: PSRVLLQDLLGVNGIDQGRVHQD*SKVATK Trigger: TTTCGTGGCCACTTTGGACAAGTCCTGGTGGACTCT...GCCTTGATCTATGCCATTCACGCCGAGGAGATCCTGGAGAAGCACCCGCGAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000599255.5 |
||
| CDS-3UTR CAA 90 bp | TCGCGGGTGCTTCTCCAGGATCTCCTCGGCGTGAATGGCATAGATCAAGGCGCCCATGTTTTGGTGTCGTaGTTCCACGTGCAGTCGTAC | + |
|
Preference number: 5 (lower is better) Translates to: SRVLLQDLLGVNGIDQGAHVLVS*FHVQSY Trigger: GTACGACTGCACGTGGAACAACGACACCAAAACATG...GGCGCCTTGATCTATGCCATTCACGCCGAGGAGATCCTGGAGAAGCACCCGCGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000599255.5 |
||
| CDS-3UTR CAA 90 bp | GGCGTGAATGGCATAGATCAAGGCGCCAGTAAACACCGCCACGCTGGTGCAAAGCTGCAGGCCCATGTTTaGGTGTCGTTGTTCCACGTG | + |
|
Preference number: 5 (lower is better) Translates to: GVNGIDQGASKHRHAGAKLQAHV*VSLFHV Trigger: CACGTGGAACAACGACACCAAAACATGGGCCTGCAG...CTTTGCACCAGCGTGGCGGTGTTTACTGGCGCCTTGATCTATGCCATTCACGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000599255.5 |
||
| CDS TCA 90 bp | CCCACTCCAACTTTGTTGGGGGAGGGTTCCCAATTCTCAGTCCCATaGGGACACGAAGGGTTTACCTTCCCCTTTGAAGACCAGTCCCGC | + |
|
Preference number: 5 (lower is better) Translates to: PTPTLLGEGSQFSVP*GHEGFTFPFEDQSR Trigger: GCGGGACTGGTCTTCAAAGGGGAAGGTAAACCCTTCGTGTCCTCATGGGACTGAGAATTGGGAACCCTCCCCCAACAAAGTTGGAGTGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000597529.1 |
||
| CDS CAA 72 bp | CTCCAGCGCGCGGACGTGGTAGGCGGCCAAGCGTTTTaGGCTGCTTCCCGGGAAGCCGTTGGTCGCGCTTGC | + |
|
Preference number: 6 (lower is better) Translates to: LQRADVVGGQAF*AASREAVGRAC Trigger: GCAAGCGCGACCAACGGCTTCCCGGGAAGCAGCCAAAAACGCTTGGCCGCCTACCACGTCCGCGCGCTGGAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000599704.5 |
||
| CDS GCA 72 bp | GCGCGCGGACGTGGTAGGCGGCCAAGCGTTTTTGGCTaGTTCCCGGGAAGCCGTTGGTCGCGCTTGCGTAGT | + |
|
Preference number: 6 (lower is better) Translates to: ARGRGRRPSVFG*FPGSRWSRLRS Trigger: ACTACGCAAGCGCGACCAACGGCTTCCCGGGAAGCAGCCAAAAACGCTTGGCCGCCTACCACGTCCGCGCGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000599704.5 |
||
| CDS CAA 90 bp | ACTTCCGCCCTCCAGCGCGCGGACGTGGTAGGCGGCCAAGCGTTTTaGGCTGCTTCCCGGGAAGCCGTTGGTCGCGCTTGCGTAGTGAAC | + |
|
Preference number: 6 (lower is better) Translates to: TSALQRADVVGGQAF*AASREAVGRACVVN Trigger: GTTCACTACGCAAGCGCGACCAACGGCTTCCCGGGAAGCAGCCAAAAACGCTTGGCCGCCTACCACGTCCGCGCGCTGGAGGGCGGAAGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000599704.5 |
||
| CDS CCA 72 bp | GGCACCTCTCGGGCTCCGTCTTGTAGGACCTCGGCCTaGCTTCGAGGGCTTCCATACAGGTCACCGCAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: GTSRAPSCRTSA*LRGLPYRSPQA Trigger: AGCCTGCGGTGACCTGTATGGAAGCCCTCGAAGCCAGGCCGAGGTCCTACAAGACGGAGCCCGAGAGGTGCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000599704.5 |
||
| CDS TCA 72 bp | TGGTCGCGCTTGCGTAGTGAACCGCTGAGGCTGTGTTaGGCGCTCCTTCTCCGCGCAACTCCCGGCTTCGAC | + |
|
Preference number: 6 (lower is better) Translates to: WSRLRSEPLRLC*ALLLRATPGFD Trigger: GTCGAAGCCGGGAGTTGCGCGGAGAAGGAGCGCTCAACACAGCCTCAGCGGTTCACTACGCAAGCGCGACCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000599704.5 |
||
| CDS TCA 72 bp | CGGGAAGCCGTTGGTCGCGCTTGCGTAGTGAACCGCTaGGGCTGTGTTGAGCGCTCCTTCTCCGCGCAACTC | + |
|
Preference number: 6 (lower is better) Translates to: REAVGRACVVNR*GCVERSFSAQL Trigger: GAGTTGCGCGGAGAAGGAGCGCTCAACACAGCCTCAGCGGTTCACTACGCAAGCGCGACCAACGGCTTCCCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000599704.5 |
||
| CDS CCA 72 bp | CGGCCAAGCGTTTTTGGCTGCTTCCCGGGAAGCCGTTaGTCGCGCTTGCGTAGTGAACCGCTGAGGCTGTGT | + |
|
Preference number: 6 (lower is better) Translates to: RPSVFGCFPGSR*SRLRSEPLRLC Trigger: ACACAGCCTCAGCGGTTCACTACGCAAGCGCGACCAACGGCTTCCCGGGAAGCAGCCAAAAACGCTTGGCCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000599704.5 |
||
| CDS CCA 72 bp | TGTGAAGGGCTGAGACCACCAGCAAGAGGAGTGACATaGCTGCAGTGGAAGCCCACTTCCGCCCTCCAGCGC | + |
|
Preference number: 6 (lower is better) Translates to: CEGLRPPARGVT*LQWKPTSALQR Trigger: GCGCTGGAGGGCGGAAGTGGGCTTCCACTGCAGCCATGTCACTCCTCTTGCTGGTGGTCTCAGCCCTTCACA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000599704.5 |
||
| CDS CCA 72 bp | CCACTCAGGCCTGGACCCCGCCCACTCCAACTTTGTTaGGGGAGGGTTCCCAATTCTCAGTCCCATGAGGAC | + |
|
Preference number: 6 (lower is better) Translates to: PLRPGPRPLQLC*GRVPNSQSHED Trigger: GTCCTCATGGGACTGAGAATTGGGAACCCTCCCCCAACAAAGTTGGAGTGGGCGGGGTCCAGGCCTGAGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000597529.1 |
||
| CDS CCA 72 bp | CCTGCAGTAAGGAGGACACAGAGGGGGACATCACCGTaGGTCCAGAGTTCCAGCTTCACCTGCTTGCTCACC | + |
|
Preference number: 6 (lower is better) Translates to: PAVRRTQRGTSP*VQSSSFTCLLT Trigger: GGTGAGCAAGCAGGTGAAGCTGGAACTCTGGACCCACGGTGATGTCCCCCTCTGTGTCCTCCTTACTGCAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000597057.1 |
||
| CDS TCA 72 bp | ACCAGTCCCGCCGCCCTCACCCCTCACCATTCTCGCTaGCATTACTGCAGGCCCATGTTTTGGTGTCGTTGT | + |
|
Preference number: 6 (lower is better) Translates to: TSPAALTPHHSR*HYCRPMFWCRC Trigger: ACAACGACACCAAAACATGGGCCTGCAGTAATGTCAGCGAGAATGGTGAGGGGTGAGGGCGGCGGGACTGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000597529.1 ENST00000599255.5 |
||
| CDS TCA 72 bp | GGCTGCAGTGGAAGCCCCACCCTGCTGCCAGACTGGTaGCTGTTGGACATCTTCTGGAGGAAATGGATAGGA | + |
|
Preference number: 6 (lower is better) Translates to: GCSGSPTLLPDW*LLDIFWRKWIG Trigger: TCCTATCCATTTCCTCCAGAAGATGTCCAACAGTCACCAGTCTGGCAGCAGGGTGGGGCTTCCACTGCAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000597279.5 |
||
| CDS CAA 90 bp | GCCTTCAGCCAGCCATTCTCGCTGACATTACTGCAGGCCCATGTTTaGGTGTCGTTGTTCCACGTGCAGTCGTACCAGAGATTCAGGGAC | + |
|
Preference number: 6 (lower is better) Translates to: AFSQPFSLTLLQAHV*VSLFHVQSYQRFRD Trigger: GTCCCTGAATCTCTGGTACGACTGCACGTGGAACAACGACACCAAAACATGGGCCTGCAGTAATGTCAGCGAGAATGGCTGGCTGAAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000270221.11 ENST00000596315.5 ENST00000597279.5 ENST00000599704.5 |
||
| CDS CAA 90 bp | CCTCACCCCTCACCATTCTCGCTGACATTACTGCAGGCCCATGTTTaGGTGTCGTTGTTCCACGTGCAGTCGTACCAGAGATTCAGGGAC | + |
|
Preference number: 6 (lower is better) Translates to: PHPSPFSLTLLQAHV*VSLFHVQSYQRFRD Trigger: GTCCCTGAATCTCTGGTACGACTGCACGTGGAACAACGACACCAAAACATGGGCCTGCAGTAATGTCAGCGAGAATGGTGAGGGGTGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000597529.1 ENST00000599255.5 |
||
| CDS GCA 72 bp | TACTGCAGGCCCATGTTTTGGTGTCGTTGTTCCACGTaGAGTCGTACCAGAGATTCAGGGACTCTTTCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: YCRPMFWCRCST*SRTRDSGTLSQ Trigger: CTGGGAAAGAGTCCCTGAATCTCTGGTACGACTGCACGTGGAACAACGACACCAAAACATGGGCCTGCAGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000270221.11 ENST00000596315.5 ENST00000597279.5 ENST00000597529.1 ENST00000599255.5 ENST00000599704.5 |
||
| CDS CAA 72 bp | TCGCTGACATTACTGCAGGCCCATGTTTTGGTGTCGTaGTTCCACGTGCAGTCGTACCAGAGATTCAGGGAC | + |
|
Preference number: 6 (lower is better) Translates to: SLTLLQAHVLVS*FHVQSYQRFRD Trigger: GTCCCTGAATCTCTGGTACGACTGCACGTGGAACAACGACACCAAAACATGGGCCTGCAGTAATGTCAGCGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000270221.11 ENST00000596315.5 ENST00000597279.5 ENST00000597529.1 ENST00000599255.5 ENST00000599704.5 |
||
| CDS CAA 72 bp | CAGCCATTCTCGCTGACATTACTGCAGGCCCATGTTTaGGTGTCGTTGTTCCACGTGCAGTCGTACCAGAGA | + |
|
Preference number: 6 (lower is better) Translates to: QPFSLTLLQAHV*VSLFHVQSYQR Trigger: TCTCTGGTACGACTGCACGTGGAACAACGACACCAAAACATGGGCCTGCAGTAATGTCAGCGAGAATGGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000270221.11 ENST00000596315.5 ENST00000597279.5 ENST00000599704.5 |
||
| CDS CAA 90 bp | CAGCCATTCTCGCTGACATTACTGCAGGCCCATGTTTTGGTGTCGTaGTTCCACGTGCAGTCGTACCAGAGATTCAGGGACTCTTTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: QPFSLTLLQAHVLVS*FHVQSYQRFRDSFP Trigger: TGGGAAAGAGTCCCTGAATCTCTGGTACGACTGCACGTGGAACAACGACACCAAAACATGGGCCTGCAGTAATGTCAGCGAGAATGGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000270221.11 ENST00000596315.5 ENST00000597279.5 ENST00000599704.5 |
||
| CDS CAA 90 bp | TCACCATTCTCGCTGACATTACTGCAGGCCCATGTTTTGGTGTCGTaGTTCCACGTGCAGTCGTACCAGAGATTCAGGGACTCTTTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: SPFSLTLLQAHVLVS*FHVQSYQRFRDSFP Trigger: TGGGAAAGAGTCCCTGAATCTCTGGTACGACTGCACGTGGAACAACGACACCAAAACATGGGCCTGCAGTAATGTCAGCGAGAATGGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000597529.1 ENST00000599255.5 |
||
| CDS TCA 72 bp | ACTTTGTTGGGGGAGGGTTCCCAATTCTCAGTCCCATaGGGACACGAAGGGTTTACCTTCCCCTTTGAAGAC | + |
|
Preference number: 6 (lower is better) Translates to: TLLGEGSQFSVP*GHEGFTFPFED Trigger: GTCTTCAAAGGGGAAGGTAAACCCTTCGTGTCCTCATGGGACTGAGAATTGGGAACCCTCCCCCAACAAAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000597529.1 |
||
| CDS CAA 72 bp | TCACCATTCTCGCTGACATTACTGCAGGCCCATGTTTaGGTGTCGTTGTTCCACGTGCAGTCGTACCAGAGA | + |
|
Preference number: 6 (lower is better) Translates to: SPFSLTLLQAHV*VSLFHVQSYQR Trigger: TCTCTGGTACGACTGCACGTGGAACAACGACACCAAAACATGGGCCTGCAGTAATGTCAGCGAGAATGGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000597529.1 ENST00000599255.5 |
||
| CDS TCA 72 bp | AAAGTGGCCACGAAAAGCAGTATAAGAATGAGGATGTaGAGGGCTGAGACCACCAGCAAGAGGAGTGACATG | + |
|
Preference number: 6 (lower is better) Translates to: KVATKSSIRMRM*RAETTSKRSDM Trigger: CATGTCACTCCTCTTGCTGGTGGTCTCAGCCCTTCACATCCTCATTCTTATACTGCTTTTCGTGGCCACTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000270221.11 ENST00000593437.1 ENST00000597279.5 ENST00000597529.1 ENST00000599255.5 ENST00000599704.5 |
||