RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EMP2 (Homo sapiens)

Ensembl gene IDs: ENSG00000213853

Ensembl transcript IDs: ENST00000342147.4, ENST00000359543.8, ENST00000536829.1

Found 275 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCCCAGCATTTACGAGGCAGCTCTGCTGACCTGGCCCAGGCACCGTaGTCCCCAACTTCAACGCATCTGAAGCGTTGCCCAGGGAGCGCG +
Preference number: 1 (lower is better)
Translates to: PQHLRGSSADLAQAP*SPTSTHLKRCPGSA
Trigger: CGCGCTCCCTGGGCAACGCTTCAGATGCGTTGAAGTTGGGGACCACGGTGCCTGGGCCAGGTCAGCAGAGCTGCCTCGTAAATGCTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359543.8
3UTR GCA 90 bp CTGGCCCAGGCACCGTGGTCCCCAACTTCAACGCATCTGAAGCGTTaGCCAGGGAGCGCGTTAGAAATGCAGATTCCCTGGCCCCATCCC +
Preference number: 1 (lower is better)
Translates to: LAQAPWSPTSTHLKR*PGSALEMQIPWPHP
Trigger: GGGATGGGGCCAGGGAATCTGCATTTCTAACGCGCTCCCTGGGCAACGCTTCAGATGCGTTGAAGTTGGGGACCACGGTGCCTGGGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359543.8
3UTR TCA 90 bp CCATCTCCACATGACGATACCCCAGCATTTACGAGGCAGCTCTGCTaGCCTGGCCCAGGCACCGTGGTCCCCAACTTCAACGCATCTGAA +
Preference number: 1 (lower is better)
Translates to: PSPHDDTPAFTRQLC*PGPGTVVPNFNASE
Trigger: TTCAGATGCGTTGAAGTTGGGGACCACGGTGCCTGGGCCAGGTCAGCAGAGCTGCCTCGTAAATGCTGGGGTATCGTCATGTGGAGATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359543.8
3UTR CCA 90 bp TTTTCTGACCCACCCCGATACCGGAGGGATGGCTGGGCTCTGGTTTaGATACAGACAGAATGCCAGGGACTACACCTGCTTCTCACTTGG +
Preference number: 1 (lower is better)
Translates to: FSDPPRYRRDGWALV*IQTECQGLHLLLTW
Trigger: CCAAGTGAGAAGCAGGTGTAGTCCCTGGCATTCTGTCTGTATCCAAACCAGAGCCCAGCCATCCCTCCGGTATCGGGGTGGGTCAGAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359543.8
3UTR GCA 90 bp CGATACCGGAGGGATGGCTGGGCTCTGGTTTGGATACAGACAGAATaGCAGGGACTACACCTGCTTCTCACTTGGAACTTGGGTGAAACC +
Preference number: 1 (lower is better)
Translates to: RYRRDGWALVWIQTE*QGLHLLLTWNLGET
Trigger: GGTTTCACCCAAGTTCCAAGTGAGAAGCAGGTGTAGTCCCTGGCATTCTGTCTGTATCCAAACCAGAGCCCAGCCATCCCTCCGGTATCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359543.8
3UTR CCA 90 bp AGACTTTTTCTGACCCACCCCGATACCGGAGGGATGGCTGGGCTCTaGTTTGGATACAGACAGAATGCCAGGGACTACACCTGCTTCTCA +
Preference number: 1 (lower is better)
Translates to: RLFLTHPDTGGMAGL*FGYRQNARDYTCFS
Trigger: TGAGAAGCAGGTGTAGTCCCTGGCATTCTGTCTGTATCCAAACCAGAGCCCAGCCATCCCTCCGGTATCGGGGTGGGTCAGAAAAAGTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359543.8
3UTR CCA 90 bp GTGACATTTGTCCTGTCTCTGGCCCCAGGTCACCCTGTACTGCATTaGTGGCTTCTCCATAGGGAGGGGGTCCTATCTCATAGACTCCAA +
Preference number: 1 (lower is better)
Translates to: VTFVLSLAPGHPVLH*WLLHREGVLSHRLQ
Trigger: TTGGAGTCTATGAGATAGGACCCCCTCCCTATGGAGAAGCCACCAATGCAGTACAGGGTGACCTGGGGCCAGAGACAGGACAAATGTCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359543.8
3UTR GCA 90 bp CTCCTGGGATGGTTCCTGGGTGGTCTGCATTGCCACACAGCATCATaGTTTGATCCTGAAGGACAAGGCCCCAAAAGCCCTATTTCTCAG +
Preference number: 1 (lower is better)
Translates to: LLGWFLGGLHCHTAS*FDPEGQGPKSPISQ
Trigger: CTGAGAAATAGGGCTTTTGGGGCCTTGTCCTTCAGGATCAAAGCATGATGCTGTGTGGCAATGCAGACCACCCAGGAACCATCCCAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359543.8
3UTR CCA 90 bp ACATTTGTCCTGTCTCTGGCCCCAGGTCACCCTGTACTGCATTGGTaGCTTCTCCATAGGGAGGGGGTCCTATCTCATAGACTCCAAACT +
Preference number: 1 (lower is better)
Translates to: TFVLSLAPGHPVLHW*LLHREGVLSHRLQT
Trigger: AGTTTGGAGTCTATGAGATAGGACCCCCTCCCTATGGAGAAGCCACCAATGCAGTACAGGGTGACCTGGGGCCAGAGACAGGACAAATGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359543.8
3UTR TCA 90 bp GGACAGCCCCCAGCATCCTGCTCCAACATAAGCAGAAAAAGACAATaGGGTGCAAAGAGCTTATCTCCTGGGATGGTTCCTGGGTGGTCT +
Preference number: 1 (lower is better)
Translates to: GQPPASCSNISRKRQ*GAKSLSPGMVPGWS
Trigger: AGACCACCCAGGAACCATCCCAGGAGATAAGCTCTTTGCACCTCATTGTCTTTTTCTGCTTATGTTGGAGCAGGATGCTGGGGGCTGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000359543.8
3UTR GCA 90 bp GCTGGGCTCTGGTTTGGATACAGACAGAATGCCAGGGACTACACCTaGTTCTCACTTGGAACTTGGGTGAAACCTCTCAGGAAGCTGTCA +
Preference number: 1 (lower is better)
Translates to: AGLWFGYRQNARDYT*FSLGTWVKPLRKLS
Trigger: TGACAGCTTCCTGAGAGGTTTCACCCAAGTTCCAAGTGAGAAGCAGGTGTAGTCCCTGGCATTCTGTCTGTATCCAAACCAGAGCCCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359543.8
3UTR GCA 90 bp GTGCAAAGAGCTTATCTCCTGGGATGGTTCCTGGGTGGTCTGCATTaGCACACAGCATCATGCTTTGATCCTGAAGGACAAGGCCCCAAA +
Preference number: 1 (lower is better)
Translates to: VQRAYLLGWFLGGLH*HTASCFDPEGQGPK
Trigger: TTTGGGGCCTTGTCCTTCAGGATCAAAGCATGATGCTGTGTGGCAATGCAGACCACCCAGGAACCATCCCAGGAGATAAGCTCTTTGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359543.8
3UTR GCA 90 bp ATGAGGTGCAAAGAGCTTATCTCCTGGGATGGTTCCTGGGTGGTCTaGATTGCCACACAGCATCATGCTTTGATCCTGAAGGACAAGGCC +
Preference number: 1 (lower is better)
Translates to: MRCKELISWDGSWVV*IATQHHALILKDKA
Trigger: GGCCTTGTCCTTCAGGATCAAAGCATGATGCTGTGTGGCAATGCAGACCACCCAGGAACCATCCCAGGAGATAAGCTCTTTGCACCTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359543.8
3UTR TCA 90 bp GACAGAATGCCAGGGACTACACCTGCTTCTCACTTGGAACTTGGGTaGAACCTCTCAGGAAGCTGTCATTCTTCTCCTATACCCCACCTC +
Preference number: 1 (lower is better)
Translates to: DRMPGTTPASHLELG*NLSGSCHSSPIPHL
Trigger: GAGGTGGGGTATAGGAGAAGAATGACAGCTTCCTGAGAGGTTTCACCCAAGTTCCAAGTGAGAAGCAGGTGTAGTCCCTGGCATTCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359543.8
3UTR TCA 90 bp AATCTGGCACGCAGGTTAAGGATGACCATTCCTAAGGCAAGCAGGTaGCACTGTCGGCAAATTGAGGTGAGACTTTTTCTGACCCACCCC +
Preference number: 1 (lower is better)
Translates to: NLARRLRMTIPKASR*HCRQIEVRLFLTHP
Trigger: GGGGTGGGTCAGAAAAAGTCTCACCTCAATTTGCCGACAGTGTCACCTGCTTGCCTTAGGAATGGTCATCCTTAACCTGCGTGCCAGATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359543.8
3UTR CCA 90 bp GTAAGCCACATTCTTGCCCACAATATGACTAGTGAGAGTATCTCATaGAGGCAGGAGGTGACATTTGTCCTGTCTCTGGCCCCAGGTCAC +
Preference number: 1 (lower is better)
Translates to: VSHILAHNMTSESIS*RQEVTFVLSLAPGH
Trigger: GTGACCTGGGGCCAGAGACAGGACAAATGTCACCTCCTGCCTCCATGAGATACTCTCACTAGTCATATTGTGGGCAAGAATGTGGCTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359543.8
3UTR TCA 90 bp TGTGTTTACAAACAGGCTTGGAGTTCTAGGTTTCTTCATCATCAGTaGACACAGAGCGTCCTAGAGCGCCAGCCTGTTCATGAGGGGTGT +
Preference number: 1 (lower is better)
Translates to: CVYKQAWSSRFLHHQ*TQSVLERQPVHEGC
Trigger: ACACCCCTCATGAACAGGCTGGCGCTCTAGGACGCTCTGTGTTCACTGATGATGAAGAAACCTAGAACTCCAAGCCTGTTTGTAAACACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359543.8
3UTR CCA 90 bp TCCTATCTCATAGACTCCAAACTTCATGATGGCAGGGAGGATATCTaGATTTGCTCACCCCTGTATTTTCAGAGCCTCACACAGTGCCTG +
Preference number: 1 (lower is better)
Translates to: SYLIDSKLHDGREDI*ICSPLYFQSLTQCL
Trigger: CAGGCACTGTGTGAGGCTCTGAAAATACAGGGGTGAGCAAATCCAGATATCCTCCCTGCCATCATGAAGTTTGGAGTCTATGAGATAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359543.8
3UTR TCA 90 bp ATTTTTGCTTGTGTCTTGTTGAGACTTTTGAGTGGGCAGCAGTTCTaGATACCAGCCTTCATAGTCTATTCTCTGATCTCAAGAATGCAA +
Preference number: 1 (lower is better)
Translates to: IFACVLLRLLSGQQF*IPAFIVYSLISRMQ
Trigger: TTGCATTCTTGAGATCAGAGAATAGACTATGAAGGCTGGTATTCAGAACTGCTGCCCACTCAAAAGTCTCAACAAGACACAAGCAAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359543.8
3UTR GCA 90 bp TGTCAAAAACAAATGAATGAAAGAGCAGATGGAAAGAGCCAATCCTaGATTGAAGAGATATCCATGGTGGCCCTAAAACTACTCAAACCA +
Preference number: 1 (lower is better)
Translates to: CQKQMNERADGKSQS*IEEISMVALKLLKP
Trigger: TGGTTTGAGTAGTTTTAGGGCCACCATGGATATCTCTTCAATGCAGGATTGGCTCTTTCCATCTGCTCTTTCATTCATTTGTTTTTGACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359543.8
3UTR CAA 90 bp CTCACCCTCTTCCACCCACCACTAGCAGAGAGATTCGGGAGGGGCTaGGGCCAGCTGAAACCCATAGGAAGCACGTCCCCAGAGACCCGG +
Preference number: 2 (lower is better)
Translates to: LTLFHPPLAERFGRG*GQLKPIGSTSPETR
Trigger: CCGGGTCTCTGGGGACGTGCTTCCTATGGGTTTCAGCTGGCCCAAGCCCCTCCCGAATCTCTCTGCTAGTGGTGGGTGGAAGAGGGTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359543.8
3UTR CAA 90 bp CCTGGCCCAGGCACCGTGGTCCCCAACTTCAACGCATCTGAAGCGTaGCCCAGGGAGCGCGTTAGAAATGCAGATTCCCTGGCCCCATCC +
Preference number: 2 (lower is better)
Translates to: PGPGTVVPNFNASEA*PRERVRNADSLAPS
Trigger: GGATGGGGCCAGGGAATCTGCATTTCTAACGCGCTCCCTGGGCAACGCTTCAGATGCGTTGAAGTTGGGGACCACGGTGCCTGGGCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359543.8
3UTR-3UTR CCA 90 bp GACAGCTGTGGCGATGGAGGCCAAGGTTTTGGCCTGCTGTGGGGGTTGCATTCACCCATCACAGCCCCATaGTTAAGAAATGTCCTGCCG +
Preference number: 2 (lower is better)
Translates to: DSCGDGGQGFGLLWGLHSPITAP*LRNVLP
Trigger: CGGCAGGACATTTCTTAACCATGGGGCTGTGATGGG...TGAATGCAACCCCCACAGCAGGCCAAAACCTTGGCCTCCATCGCCACAGCTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359543.8
3UTR-3UTR TCA 90 bp CCATGGGCCCCTCCACAGACATGTTTTCTGGGTGTTACACAGACAGGTACTGCCGGTGGATGGGTCCTCTaGGGCTCTAGAAATAGGGGT +
Preference number: 2 (lower is better)
Translates to: PWAPPQTCFLGVTQTGTAGGWVL*GSRNRG
Trigger: ACCCCTATTTCTAGAGCCTCAGAGGACCCATCCACC...GGCAGTACCTGTCTGTGTAACACCCAGAAAACATGTCTGTGGAGGGGCCCATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359543.8
3UTR-3UTR CCA 90 bp TTACACAGACAGGTACTGCCCAATAACTGTCATCTGCACGAACTGAATGGAGCTGCAGCTCTGCTGACCTaGCCCAGGCACCGTGGTCCC +
Preference number: 2 (lower is better)
Translates to: LHRQVLPNNCHLHELNGAAALLT*PRHRGP
Trigger: GGGACCACGGTGCCTGGGCCAGGTCAGCAGAGCTGC...AGCTCCATTCAGTTCGTGCAGATGACAGTTATTGGGCAGTACCTGTCTGTGTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359543.8
3UTR-3UTR CCA 90 bp CCATGGGCCCCTCCACAGACATGTTTTCTGGGTGTTACACAGACAGGTACTGCCAGCCTCCTAAGTAGCTaGGATTACAGGCACCTGCCA +
Preference number: 2 (lower is better)
Translates to: PWAPPQTCFLGVTQTGTASLLSS*DYRHLP
Trigger: TGGCAGGTGCCTGTAATCCCAGCTACTTAGGAGGCT...GGCAGTACCTGTCTGTGTAACACCCAGAAAACATGTCTGTGGAGGGGCCCATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359543.8
3UTR-3UTR TCA 90 bp GTTGTACAGCAGTGGCAACCAGCCGGGAAAATCCATAGGATCATTTCAGACCGCCAGCTCCACTGGAACTaGGCTGATGGCAAACCACCA +
Preference number: 2 (lower is better)
Translates to: VVQQWQPAGKIHRIISDRQLHWN*ADGKPP
Trigger: TGGTGGTTTGCCATCAGCTCAGTTCCAGTGGAGCTG...GCGGTCTGAAATGATCCTATGGATTTTCCCGGCTGGTTGCCACTGCTGTACAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359543.8
3UTR-3UTR TCA 90 bp ACCATGGGCCCCTCCACAGACATGTTTTCTGGGTGTTACACAGACAGGTACTGCAGTGGGCAGCAGTTCTaGATACCAGCCTTCATAGTC +
Preference number: 2 (lower is better)
Translates to: TMGPSTDMFSGCYTDRYCSGQQF*IPAFIV
Trigger: GACTATGAAGGCTGGTATTCAGAACTGCTGCCCACT...GCAGTACCTGTCTGTGTAACACCCAGAAAACATGTCTGTGGAGGGGCCCATGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359543.8
3UTR-3UTR GCA 90 bp CCATGGGCCCCTCCACAGACATGTTTTCTGGGTGTTACACAGACAGGTACTGCCTGGATACAGACAGAATaGCAGGGACTACACCTGCTT +
Preference number: 2 (lower is better)
Translates to: PWAPPQTCFLGVTQTGTAWIQTE*QGLHLL
Trigger: AAGCAGGTGTAGTCCCTGGCATTCTGTCTGTATCCA...GGCAGTACCTGTCTGTGTAACACCCAGAAAACATGTCTGTGGAGGGGCCCATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359543.8
3UTR-3UTR GCA 90 bp TTACACAGACAGGTACTGCCCAATAACTGTCATCTGCACGAACTGAATGGAGCTGCCTGCTGTGGGGGTTaGATTCACCTCCCCATCTCC +
Preference number: 2 (lower is better)
Translates to: LHRQVLPNNCHLHELNGAACCGG*IHLPIS
Trigger: GGAGATGGGGAGGTGAATGCAACCCCCACAGCAGGC...AGCTCCATTCAGTTCGTGCAGATGACAGTTATTGGGCAGTACCTGTCTGTGTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359543.8
3UTR-3UTR GCA 90 bp ACTATAGCAGAGTGTGTGGGAGTGAATAGGTCTCCGATGTTCCTGTATTCAGGTTCGCCTGGGCTGGAGTaGAGTGGTGAATCTCGGCTC +
Preference number: 2 (lower is better)
Translates to: TIAECVGVNRSPMFLYSGSPGLE*SGESRL
Trigger: GAGCCGAGATTCACCACTGCACTCCAGCCCAGGCGA...ACCTGAATACAGGAACATCGGAGACCTATTCACTCCCACACACTCTGCTATAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359543.8
3UTR-3UTR TCA 90 bp ATACCTAAATGCCTCCAGGAGCATTTAATAATAGGCACGCGTAAAGCAGCCTCCCAGCCAGGTGTAGCATaGAGGGCTGGACAAGAAGGG +
Preference number: 2 (lower is better)
Translates to: IPKCLQEHLIIGTRKAASQPGVA*RAGQEG
Trigger: CCCTTCTTGTCCAGCCCTTCATGCTACACCTGGCTG...GGAGGCTGCTTTACGCGTGCCTATTATTAAATGCTCCTGGAGGCATTTAGGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359543.8
3UTR-3UTR GCA 90 bp CCATGGGCCCCTCCACAGACATGTTTTCTGGGTGTTACACAGACAGGTACTGCCGGGCGCTGTAGGTTTTaGCTAAAGACGAGTCTAAAT +
Preference number: 2 (lower is better)
Translates to: PWAPPQTCFLGVTQTGTAGRCRF*LKTSLN
Trigger: ATTTAGACTCGTCTTTAGGCAAAACCTACAGCGCCC...GGCAGTACCTGTCTGTGTAACACCCAGAAAACATGTCTGTGGAGGGGCCCATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359543.8
3UTR-3UTR CCA 90 bp GACAGCTGTGGCGATGGAGGCCAAGGTTTTGGCCTGCTGTGGGGGTTGCATTCAGGATTTGAGCATTGCTaGATTTTTGCTTGTGTCTTG +
Preference number: 2 (lower is better)
Translates to: DSCGDGGQGFGLLWGLHSGFEHC*IFACVL
Trigger: CAAGACACAAGCAAAAATCCAGCAATGCTCAAATCC...TGAATGCAACCCCCACAGCAGGCCAAAACCTTGGCCTCCATCGCCACAGCTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000359543.8
3UTR-3UTR CCA 90 bp ACCATGGGCCCCTCCACAGACATGTTTTCTGGGTGTTACACAGACAGGTACTGCCACCTGCTTCTCACTTaGAACTTGGGTGAAACCTCT +
Preference number: 2 (lower is better)
Translates to: TMGPSTDMFSGCYTDRYCHLLLT*NLGETS
Trigger: AGAGGTTTCACCCAAGTTCCAAGTGAGAAGCAGGTG...GCAGTACCTGTCTGTGTAACACCCAGAAAACATGTCTGTGGAGGGGCCCATGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359543.8
3UTR-3UTR CCA 90 bp ACGCAAACTATAGCAGAGTGTGTGGGAGTGAATAGGTCTCCGATGTTCCTGTATGGGATGGTTCCTGGGTaGTCTGCATTGCCACACAGC +
Preference number: 2 (lower is better)
Translates to: TQTIAECVGVNRSPMFLYGMVPG*SALPHS
Trigger: GCTGTGTGGCAATGCAGACCACCCAGGAACCATCCC...ATACAGGAACATCGGAGACCTATTCACTCCCACACACTCTGCTATAGTTTGCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359543.8
3UTR-3UTR CCA 90 bp GTTGTACAGCAGTGGCAACCAGCCGGGAAAATCCATAGGATCATTTCAGACCGCAAAGAGCTTATCTCCTaGGATGGTTCCTGGGTGGTC +
Preference number: 2 (lower is better)
Translates to: VVQQWQPAGKIHRIISDRKELIS*DGSWVV
Trigger: GACCACCCAGGAACCATCCCAGGAGATAAGCTCTTT...GCGGTCTGAAATGATCCTATGGATTTTCCCGGCTGGTTGCCACTGCTGTACAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359543.8
3UTR-3UTR TCA 90 bp ACAGACATGTTTTCTGGGTGTTACACAGACAGGTACTGCCCAATAACTGTCATCGAACTCCTGACCTTGTaGTCCACCTGCCTCAGCCTC +
Preference number: 2 (lower is better)
Translates to: TDMFSGCYTDRYCPITVIELLTL*STCLSL
Trigger: GAGGCTGAGGCAGGTGGATCACAAGGTCAGGAGTTC...GATGACAGTTATTGGGCAGTACCTGTCTGTGTAACACCCAGAAAACATGTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359543.8
3UTR-3UTR GCA 90 bp TTACACAGACAGGTACTGCCCAATAACTGTCATCTGCACGAACTGAATGGAGCTACGCATCTGAAGCGTTaGCCAGGGAGCGCGTTAGAA +
Preference number: 2 (lower is better)
Translates to: LHRQVLPNNCHLHELNGATHLKR*PGSALE
Trigger: TTCTAACGCGCTCCCTGGGCAACGCTTCAGATGCGT...AGCTCCATTCAGTTCGTGCAGATGACAGTTATTGGGCAGTACCTGTCTGTGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359543.8
3UTR-3UTR CCA 90 bp ACAGACATGTTTTCTGGGTGTTACACAGACAGGTACTGCCCAATAACTGTCATCGGTTTTGGCCTGCTGTaGGGGTTGCATTCACCTCCC +
Preference number: 2 (lower is better)
Translates to: TDMFSGCYTDRYCPITVIGFGLL*GLHSPP
Trigger: GGGAGGTGAATGCAACCCCCACAGCAGGCCAAAACC...GATGACAGTTATTGGGCAGTACCTGTCTGTGTAACACCCAGAAAACATGTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359543.8
3UTR-3UTR CCA 90 bp TTTCAGACCGCATTCAACACAGATACTCATGTAGCCCCGACGTTTCTTGTGAAGAGACAGCTGTGGCGATaGAGGCCAAGGTTTTGGCCT +
Preference number: 2 (lower is better)
Translates to: FQTAFNTDTHVAPTFLVKRQLWR*RPRFWP
Trigger: AGGCCAAAACCTTGGCCTCCATCGCCACAGCTGTCT...CTTCACAAGAAACGTCGGGGCTACATGAGTATCTGTGTTGAATGCGGTCTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359543.8
3UTR-3UTR CCA 90 bp ATTGGTGGCTTCTCCATAGGGAGGGGGTCCTATCTCATAGACTCCAAACTTCATCCTTCTGGGATAAGATaGGAAGGAGGCTGTACCCCA +
Preference number: 2 (lower is better)
Translates to: IGGFSIGRGSYLIDSKLHPSGIR*EGGCTP
Trigger: TGGGGTACAGCCTCCTTCCCATCTTATCCCAGAAGG...ATGAAGTTTGGAGTCTATGAGATAGGACCCCCTCCCTATGGAGAAGCCACCAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359543.8
3UTR-3UTR TCA 90 bp ATACCTAAATGCCTCCAGGAGCATTTAATAATAGGCACGCGTAAAGCAGCCTCCCCTAAGGCAAGCAGGTaGCACTGTCGGCAAATTGAG +
Preference number: 2 (lower is better)
Translates to: IPKCLQEHLIIGTRKAASPKASR*HCRQIE
Trigger: CTCAATTTGCCGACAGTGTCACCTGCTTGCCTTAGG...GGAGGCTGCTTTACGCGTGCCTATTATTAAATGCTCCTGGAGGCATTTAGGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359543.8
3UTR-3UTR TCA 90 bp TTTCAGACCGCATTCAACACAGATACTCATGTAGCCCCGACGTTTCTTGTGAAGCTCCCCATCTCCACATaGCGATACCCCAGCATTTAC +
Preference number: 2 (lower is better)
Translates to: FQTAFNTDTHVAPTFLVKLPIST*RYPSIY
Trigger: GTAAATGCTGGGGTATCGTCATGTGGAGATGGGGAG...CTTCACAAGAAACGTCGGGGCTACATGAGTATCTGTGTTGAATGCGGTCTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359543.8
3UTR-3UTR TCA 90 bp TTACACAGACAGGTACTGCCCAATAACTGTCATCTGCACGAACTGAATGGAGCTACCTCCCATTTCAAGTaGTTCTCCTGCCTCAGCCAC +
Preference number: 2 (lower is better)
Translates to: LHRQVLPNNCHLHELNGATSHFK*FSCLSH
Trigger: GTGGCTGAGGCAGGAGAATCACTTGAAATGGGAGGT...AGCTCCATTCAGTTCGTGCAGATGACAGTTATTGGGCAGTACCTGTCTGTGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359543.8
3UTR-3UTR GCA 90 bp ACAGACATGTTTTCTGGGTGTTACACAGACAGGTACTGCCCAATAACTGTCATCAGAGGGTATCCCCTGTaGCTGGCACATGCATGCAAG +
Preference number: 2 (lower is better)
Translates to: TDMFSGCYTDRYCPITVIRGYPL*LAHACK
Trigger: CTTGCATGCATGTGCCAGGCACAGGGGATACCCTCT...GATGACAGTTATTGGGCAGTACCTGTCTGTGTAACACCCAGAAAACATGTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359543.8
3UTR-3UTR CCA 90 bp ACGCAAACTATAGCAGAGTGTGTGGGAGTGAATAGGTCTCCGATGTTCCTGTATGGCTGGGCTCTGGTTTaGATACAGACAGAATGCCAG +
Preference number: 2 (lower is better)
Translates to: TQTIAECVGVNRSPMFLYGWALV*IQTECQ
Trigger: CTGGCATTCTGTCTGTATCCAAACCAGAGCCCAGCC...ATACAGGAACATCGGAGACCTATTCACTCCCACACACTCTGCTATAGTTTGCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359543.8
3UTR-3UTR CCA 90 bp ATACCTAAATGCCTCCAGGAGCATTTAATAATAGGCACGCGTAAAGCAGCCTCCTGTAGCATGAAGGGCTaGACAAGAAGGGAGAGGCCT +
Preference number: 2 (lower is better)
Translates to: IPKCLQEHLIIGTRKAASCSMKG*TRRERP
Trigger: AGGCCTCTCCCTTCTTGTCCAGCCCTTCATGCTACA...GGAGGCTGCTTTACGCGTGCCTATTATTAAATGCTCCTGGAGGCATTTAGGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359543.8
3UTR-3UTR TCA 90 bp GTTGTACAGCAGTGGCAACCAGCCGGGAAAATCCATAGGATCATTTCAGACCGCGTCATCTGCACGAACTaGATGGAGCTATATTTAGAC +
Preference number: 2 (lower is better)
Translates to: VVQQWQPAGKIHRIISDRVICTN*MELYLD
Trigger: GTCTAAATATAGCTCCATTCAGTTCGTGCAGATGAC...GCGGTCTGAAATGATCCTATGGATTTTCCCGGCTGGTTGCCACTGCTGTACAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359543.8
3UTR-3UTR GCA 90 bp TCAAATACAGTTGATGCTATCTTTGGTCCTAATATGTGCTTCTTGGATGTCTACTCACCCAGGCTGGAGTaGAGTGGCACGGTCTCGGCT +
Preference number: 2 (lower is better)
Translates to: SNTVDAIFGPNMCFLDVYSPRLE*SGTVSA
Trigger: AGCCGAGACCGTGCCACTGCACTCCAGCCTGGGTGA...GTAGACATCCAAGAAGCACATATTAGGACCAAAGATAGCATCAACTGTATTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359543.8
3UTR-3UTR GCA 90 bp ATTGGTGGCTTCTCCATAGGGAGGGGGTCCTATCTCATAGACTCCAAACTTCATCAGAGCCTCACACAGTaGCTGGAACATGGTAAACAT +
Preference number: 2 (lower is better)
Translates to: IGGFSIGRGSYLIDSKLHQSLTQ*LEHGKH
Trigger: ATGTTTACCATGTTCCAGGCACTGTGTGAGGCTCTG...ATGAAGTTTGGAGTCTATGAGATAGGACCCCCTCCCTATGGAGAAGCCACCAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359543.8
3UTR-3UTR CCA 90 bp TTTCAGACCGCATTCAACACAGATACTCATGTAGCCCCGACGTTTCTTGTGAAGCACATGGCTCAGGAATaGAGTTTTGGGGCCCTAGAT +
Preference number: 2 (lower is better)
Translates to: FQTAFNTDTHVAPTFLVKHMAQE*SFGALD
Trigger: ATCTAGGGCCCCAAAACTCCATTCCTGAGCCATGTG...CTTCACAAGAAACGTCGGGGCTACATGAGTATCTGTGTTGAATGCGGTCTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359543.8
3UTR-3UTR CCA 90 bp CTACACCTGCTTCTCACTTGGAACTTGGGTGAAACCTCTCAGGAAGCTGTCATTGTTGAGACTTTTGAGTaGGCAGCAGTTCTGAATACC +
Preference number: 2 (lower is better)
Translates to: LHLLLTWNLGETSQEAVIVETFE*AAVLNT
Trigger: GGTATTCAGAACTGCTGCCCACTCAAAAGTCTCAAC...AATGACAGCTTCCTGAGAGGTTTCACCCAAGTTCCAAGTGAGAAGCAGGTGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359543.8
3UTR-3UTR CCA 90 bp ACGCAAACTATAGCAGAGTGTGTGGGAGTGAATAGGTCTCCGATGTTCCTGTATAAAACTCCAGCTCTATaGGACCCTCTCACCGCATTT +
Preference number: 2 (lower is better)
Translates to: TQTIAECVGVNRSPMFLYKTPAL*DPLTAF
Trigger: AAATGCGGTGAGAGGGTCCCATAGAGCTGGAGTTTT...ATACAGGAACATCGGAGACCTATTCACTCCCACACACTCTGCTATAGTTTGCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359543.8
3UTR-3UTR TCA 90 bp CTACACCTGCTTCTCACTTGGAACTTGGGTGAAACCTCTCAGGAAGCTGTCATTGAGTGCTTTTGGATTTaGGCATTGCTGGATTTTTGC +
Preference number: 2 (lower is better)
Translates to: LHLLLTWNLGETSQEAVIECFWI*ALLDFC
Trigger: GCAAAAATCCAGCAATGCTCAAATCCAAAAGCACTC...AATGACAGCTTCCTGAGAGGTTTCACCCAAGTTCCAAGTGAGAAGCAGGTGTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359543.8
3UTR-3UTR CCA 90 bp ATACCTAAATGCCTCCAGGAGCATTTAATAATAGGCACGCGTAAAGCAGCCTCCTTCTCACTTGGAACTTaGGTGAAACCTCTCAGGAAG +
Preference number: 2 (lower is better)
Translates to: IPKCLQEHLIIGTRKAASFSLGT*VKPLRK
Trigger: CTTCCTGAGAGGTTTCACCCAAGTTCCAAGTGAGAA...GGAGGCTGCTTTACGCGTGCCTATTATTAAATGCTCCTGGAGGCATTTAGGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359543.8
3UTR-3UTR TCA 90 bp ACGCAAACTATAGCAGAGTGTGTGGGAGTGAATAGGTCTCCGATGTTCCTGTATGTAATAAGCACCAAGTaGGGGCTGATTCTATCTACA +
Preference number: 2 (lower is better)
Translates to: TQTIAECVGVNRSPMFLYVISTK*GLILST
Trigger: TGTAGATAGAATCAGCCCTCACTTGGTGCTTATTAC...ATACAGGAACATCGGAGACCTATTCACTCCCACACACTCTGCTATAGTTTGCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359543.8
3UTR-3UTR CCA 90 bp TCAAATACAGTTGATGCTATCTTTGGTCCTAATATGTGCTTCTTGGATGTCTACCCTGTACTGCATTGGTaGCTTCTCCATAGGGAGGGG +
Preference number: 2 (lower is better)
Translates to: SNTVDAIFGPNMCFLDVYPVLHW*LLHREG
Trigger: CCCCTCCCTATGGAGAAGCCACCAATGCAGTACAGG...GTAGACATCCAAGAAGCACATATTAGGACCAAAGATAGCATCAACTGTATTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359543.8
3UTR-3UTR TCA 90 bp TCAAATACAGTTGATGCTATCTTTGGTCCTAATATGTGCTTCTTGGATGTCTACAGTTCGAAACCAGCCTaGCCAACATGGAGAAACCCC +
Preference number: 2 (lower is better)
Translates to: SNTVDAIFGPNMCFLDVYSSKPA*PTWRNP
Trigger: GGGGTTTCTCCATGTTGGTCAGGCTGGTTTCGAACT...GTAGACATCCAAGAAGCACATATTAGGACCAAAGATAGCATCAACTGTATTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359543.8
3UTR-3UTR CCA 90 bp TCAAATACAGTTGATGCTATCTTTGGTCCTAATATGTGCTTCTTGGATGTCTACCACCCTGTACTGCATTaGTGGCTTCTCCATAGGGAG +
Preference number: 2 (lower is better)
Translates to: SNTVDAIFGPNMCFLDVYHPVLH*WLLHRE
Trigger: CTCCCTATGGAGAAGCCACCAATGCAGTACAGGGTG...GTAGACATCCAAGAAGCACATATTAGGACCAAAGATAGCATCAACTGTATTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359543.8
3UTR-3UTR GCA 90 bp ACGCAAACTATAGCAGAGTGTGTGGGAGTGAATAGGTCTCCGATGTTCCTGTATTTTGGATTTGAGCATTaGTGGATTTTTGCTTGTGTC +
Preference number: 2 (lower is better)
Translates to: TQTIAECVGVNRSPMFLYFGFEH*WIFACV
Trigger: GACACAAGCAAAAATCCAGCAATGCTCAAATCCAAA...ATACAGGAACATCGGAGACCTATTCACTCCCACACACTCTGCTATAGTTTGCGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359543.8
3UTR-3UTR CCA 90 bp TCAAATACAGTTGATGCTATCTTTGGTCCTAATATGTGCTTCTTGGATGTCTACAGATGTAGACAGCTGTaGCGATGGAGGCCAAGGTTT +
Preference number: 2 (lower is better)
Translates to: SNTVDAIFGPNMCFLDVYRCRQL*RWRPRF
Trigger: AAACCTTGGCCTCCATCGCCACAGCTGTCTACATCT...GTAGACATCCAAGAAGCACATATTAGGACCAAAGATAGCATCAACTGTATTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359543.8
3UTR-3UTR TCA 90 bp TCAAATACAGTTGATGCTATCTTTGGTCCTAATATGTGCTTCTTGGATGTCTACGAATCGTTTTATTTTTaGGACGGAGTCTCAGACTGT +
Preference number: 2 (lower is better)
Translates to: SNTVDAIFGPNMCFLDVYESFYF*DGVSDC
Trigger: ACAGTCTGAGACTCCGTCTCAAAAATAAAACGATTC...GTAGACATCCAAGAAGCACATATTAGGACCAAAGATAGCATCAACTGTATTTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359543.8
3UTR-3UTR CAA 90 bp AGGCCAGCCAGGTGTAGCATGAAGGGCTGGACAAGAAGGGAGAGGCCTTCTGGGATGGAGGCCAAGGTTTaGGCCTGCTGTGGGGGTTGC +
Preference number: 3 (lower is better)
Translates to: RPARCSMKGWTRRERPSGMEAKV*ACCGGC
Trigger: GCAACCCCCACAGCAGGCCAAAACCTTGGCCTCCAT...CCCAGAAGGCCTCTCCCTTCTTGTCCAGCCCTTCATGCTACACCTGGCTGGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359543.8
3UTR CCA 72 bp CCACCCCGATACCGGAGGGATGGCTGGGCTCTGGTTTaGATACAGACAGAATGCCAGGGACTACACCTGCTT +
Preference number: 3 (lower is better)
Translates to: PPRYRRDGWALV*IQTECQGLHLL
Trigger: AAGCAGGTGTAGTCCCTGGCATTCTGTCTGTATCCAAACCAGAGCCCAGCCATCCCTCCGGTATCGGGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359543.8
3UTR CCA 72 bp ACTTTTTCTGACCCACCCCGATACCGGAGGGATGGCTaGGCTCTGGTTTGGATACAGACAGAATGCCAGGGA +
Preference number: 3 (lower is better)
Translates to: TFSDPPRYRRDG*ALVWIQTECQG
Trigger: TCCCTGGCATTCTGTCTGTATCCAAACCAGAGCCCAGCCATCCCTCCGGTATCGGGGTGGGTCAGAAAAAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359543.8
3UTR-3UTR CAA 90 bp ATTGGTGGCTTCTCCATAGGGAGGGGGTCCTATCTCATAGACTCCAAACTTCATGGCCTGCTGTGGGGGTaGCATTCACCTCCCCATCTC +
Preference number: 3 (lower is better)
Translates to: IGGFSIGRGSYLIDSKLHGLLWG*HSPPHL
Trigger: GAGATGGGGAGGTGAATGCAACCCCCACAGCAGGCC...ATGAAGTTTGGAGTCTATGAGATAGGACCCCCTCCCTATGGAGAAGCCACCAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000359543.8
3UTR GCA 72 bp AGGGATGGCTGGGCTCTGGTTTGGATACAGACAGAATaGCAGGGACTACACCTGCTTCTCACTTGGAACTTG +
Preference number: 3 (lower is better)
Translates to: RDGWALVWIQTE*QGLHLLLTWNL
Trigger: CAAGTTCCAAGTGAGAAGCAGGTGTAGTCCCTGGCATTCTGTCTGTATCCAAACCAGAGCCCAGCCATCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359543.8
3UTR-3UTR CAA 90 bp CCATGGGCCCCTCCACAGACATGTTTTCTGGGTGTTACACAGACAGGTACTGCCACAGGTTTTACCATTTaGGCCAGGCTGGTCTTGAAC +
Preference number: 3 (lower is better)
Translates to: PWAPPQTCFLGVTQTGTATGFTI*ARLVLN
Trigger: GTTCAAGACCAGCCTGGCCAAAATGGTAAAACCTGT...GGCAGTACCTGTCTGTGTAACACCCAGAAAACATGTCTGTGGAGGGGCCCATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359543.8
3UTR-3UTR CAA 90 bp CCATGGGCCCCTCCACAGACATGTTTTCTGGGTGTTACACAGACAGGTACTGCCTTTGCTTGTGTCTTGTaGAGACTTTTGAGTGGGCAG +
Preference number: 3 (lower is better)
Translates to: PWAPPQTCFLGVTQTGTAFACVL*RLLSGQ
Trigger: CTGCCCACTCAAAAGTCTCAACAAGACACAAGCAAA...GGCAGTACCTGTCTGTGTAACACCCAGAAAACATGTCTGTGGAGGGGCCCATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359543.8
3UTR-3UTR CAA 90 bp ATACCTAAATGCCTCCAGGAGCATTTAATAATAGGCACGCGTAAAGCAGCCTCCAGATTCGGGAGGGGCTaGGGCCAGCTGAAACCCATA +
Preference number: 3 (lower is better)
Translates to: IPKCLQEHLIIGTRKAASRFGRG*GQLKPI
Trigger: TATGGGTTTCAGCTGGCCCAAGCCCCTCCCGAATCT...GGAGGCTGCTTTACGCGTGCCTATTATTAAATGCTCCTGGAGGCATTTAGGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359543.8
3UTR TCA 72 bp AAACCAGATGTCTCTTCAGCTCCACTGGAACTGAGCTaGTGGCAAACCACCACTCCACTCAGCAGAAGGTCA +
Preference number: 3 (lower is better)
Translates to: KPDVSSAPLELS*WQTTTPLSRRS
Trigger: TGACCTTCTGCTGAGTGGAGTGGTGGTTTGCCATCAGCTCAGTTCCAGTGGAGCTGAAGAGACATCTGGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359543.8
3UTR GCA 72 bp TGGTTTGGATACAGACAGAATGCCAGGGACTACACCTaGTTCTCACTTGGAACTTGGGTGAAACCTCTCAGG +
Preference number: 3 (lower is better)
Translates to: WFGYRQNARDYT*FSLGTWVKPLR
Trigger: CCTGAGAGGTTTCACCCAAGTTCCAAGTGAGAAGCAGGTGTAGTCCCTGGCATTCTGTCTGTATCCAAACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359543.8
3UTR GCA 72 bp AAAGAGCTTATCTCCTGGGATGGTTCCTGGGTGGTCTaGATTGCCACACAGCATCATGCTTTGATCCTGAAG +
Preference number: 3 (lower is better)
Translates to: KELISWDGSWVV*IATQHHALILK
Trigger: CTTCAGGATCAAAGCATGATGCTGTGTGGCAATGCAGACCACCCAGGAACCATCCCAGGAGATAAGCTCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359543.8
3UTR CCA 72 bp AATGCCAGGGACTACACCTGCTTCTCACTTGGAACTTaGGTGAAACCTCTCAGGAAGCTGTCATTCTTCTCC +
Preference number: 3 (lower is better)
Translates to: NARDYTCFSLGT*VKPLRKLSFFS
Trigger: GGAGAAGAATGACAGCTTCCTGAGAGGTTTCACCCAAGTTCCAAGTGAGAAGCAGGTGTAGTCCCTGGCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359543.8
3UTR CCA 72 bp CAGACAGAATGCCAGGGACTACACCTGCTTCTCACTTaGAACTTGGGTGAAACCTCTCAGGAAGCTGTCATT +
Preference number: 3 (lower is better)
Translates to: QTECQGLHLLLT*NLGETSQEAVI
Trigger: AATGACAGCTTCCTGAGAGGTTTCACCCAAGTTCCAAGTGAGAAGCAGGTGTAGTCCCTGGCATTCTGTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359543.8
3UTR-3UTR CAA 90 bp ATTGGTGGCTTCTCCATAGGGAGGGGGTCCTATCTCATAGACTCCAAACTTCATACACAGCATCATGCTTaGATCCTGAAGGACAAGGCC +
Preference number: 3 (lower is better)
Translates to: IGGFSIGRGSYLIDSKLHTQHHA*ILKDKA
Trigger: GGCCTTGTCCTTCAGGATCAAAGCATGATGCTGTGT...ATGAAGTTTGGAGTCTATGAGATAGGACCCCCTCCCTATGGAGAAGCCACCAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359543.8
3UTR TCA 72 bp CGCAGGTTAAGGATGACCATTCCTAAGGCAAGCAGGTaGCACTGTCGGCAAATTGAGGTGAGACTTTTTCTG +
Preference number: 3 (lower is better)
Translates to: RRLRMTIPKASR*HCRQIEVRLFL
Trigger: CAGAAAAAGTCTCACCTCAATTTGCCGACAGTGTCACCTGCTTGCCTTAGGAATGGTCATCCTTAACCTGCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359543.8
3UTR TCA 72 bp AAACAGGCTTGGAGTTCTAGGTTTCTTCATCATCAGTaGACACAGAGCGTCCTAGAGCGCCAGCCTGTTCAT +
Preference number: 3 (lower is better)
Translates to: KQAWSSRFLHHQ*TQSVLERQPVH
Trigger: ATGAACAGGCTGGCGCTCTAGGACGCTCTGTGTTCACTGATGATGAAGAAACCTAGAACTCCAAGCCTGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359543.8
3UTR-3UTR CAA 90 bp ATGTTTTCTGGGTGTTACACAGACAGGTACTGCCCAATAACTGTCATCTGCACGTCCTGCCGAGTGCTTTaGGATTTGAGCATTGCTGGA +
Preference number: 3 (lower is better)
Translates to: MFSGCYTDRYCPITVICTSCRVL*DLSIAG
Trigger: TCCAGCAATGCTCAAATCCAAAAGCACTCGGCAGGA...CGTGCAGATGACAGTTATTGGGCAGTACCTGTCTGTGTAACACCCAGAAAACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359543.8
3UTR-3UTR CAA 90 bp ACTATAGCAGAGTGTGTGGGAGTGAATAGGTCTCCGATGTTCCTGTATTCAGGTGAATTGATGTATTGCTaGAGGGGGTCGATCTCTGGT +
Preference number: 3 (lower is better)
Translates to: TIAECVGVNRSPMFLYSGELMYC*RGSISG
Trigger: ACCAGAGATCGACCCCCTCAAGCAATACATCAATTC...ACCTGAATACAGGAACATCGGAGACCTATTCACTCCCACACACTCTGCTATAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359543.8
3UTR TCA 72 bp CCAGCATCCTGCTCCAACATAAGCAGAAAAAGACAATaGGGTGCAAAGAGCTTATCTCCTGGGATGGTTCCT +
Preference number: 3 (lower is better)
Translates to: PASCSNISRKRQ*GAKSLSPGMVP
Trigger: AGGAACCATCCCAGGAGATAAGCTCTTTGCACCTCATTGTCTTTTTCTGCTTATGTTGGAGCAGGATGCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359543.8
3UTR GCA 72 bp TACATTATTATCTTGATGAGAAATCAGCTGACCCCCTaGCCCTCAAAATGGCAGCATTCTGCCCTAGATGTC +
Preference number: 3 (lower is better)
Translates to: YIIILMRNQLTP*PSKWQHSALDV
Trigger: GACATCTAGGGCAGAATGCTGCCATTTTGAGGGGCAGGGGGTCAGCTGATTTCTCATCAAGATAATAATGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359543.8
3UTR CCA 72 bp ATAGACTCCAAACTTCATGATGGCAGGGAGGATATCTaGATTTGCTCACCCCTGTATTTTCAGAGCCTCACA +
Preference number: 3 (lower is better)
Translates to: IDSKLHDGREDI*ICSPLYFQSLT
Trigger: TGTGAGGCTCTGAAAATACAGGGGTGAGCAAATCCAGATATCCTCCCTGCCATCATGAAGTTTGGAGTCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359543.8
3UTR-3UTR CAA 90 bp TTTCAGACCGCATTCAACACAGATACTCATGTAGCCCCGACGTTTCTTGTGAAGCCACAGGCCTCGATTTaGAATCGTTTTATTTTTGAG +
Preference number: 3 (lower is better)
Translates to: FQTAFNTDTHVAPTFLVKPQASI*NRFIFE
Trigger: CTCAAAAATAAAACGATTCAAAATCGAGGCCTGTGG...CTTCACAAGAAACGTCGGGGCTACATGAGTATCTGTGTTGAATGCGGTCTGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359543.8
3UTR TCA 72 bp TGTGTCTTGTTGAGACTTTTGAGTGGGCAGCAGTTCTaGATACCAGCCTTCATAGTCTATTCTCTGATCTCA +
Preference number: 3 (lower is better)
Translates to: CVLLRLLSGQQF*IPAFIVYSLIS
Trigger: TGAGATCAGAGAATAGACTATGAAGGCTGGTATTCAGAACTGCTGCCCACTCAAAAGTCTCAACAAGACACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359543.8
3UTR CCA 72 bp CTGGATTTTTGCTTGTGTCTTGTTGAGACTTTTGAGTaGGCAGCAGTTCTGAATACCAGCCTTCATAGTCTA +
Preference number: 3 (lower is better)
Translates to: LDFCLCLVETFE*AAVLNTSLHSL
Trigger: TAGACTATGAAGGCTGGTATTCAGAACTGCTGCCCACTCAAAAGTCTCAACAAGACACAAGCAAAAATCCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359543.8
3UTR GCA 72 bp CAAATGAATGAAAGAGCAGATGGAAAGAGCCAATCCTaGATTGAAGAGATATCCATGGTGGCCCTAAAACTA +
Preference number: 3 (lower is better)
Translates to: QMNERADGKSQS*IEEISMVALKL
Trigger: TAGTTTTAGGGCCACCATGGATATCTCTTCAATGCAGGATTGGCTCTTTCCATCTGCTCTTTCATTCATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359543.8
3UTR-3UTR CAA 90 bp TCAAATACAGTTGATGCTATCTTTGGTCCTAATATGTGCTTCTTGGATGTCTACCGAGTGCTTTTGGATTaGAGCATTGCTGGATTTTTG +
Preference number: 3 (lower is better)
Translates to: SNTVDAIFGPNMCFLDVYRVLLD*SIAGFL
Trigger: CAAAAATCCAGCAATGCTCAAATCCAAAAGCACTCG...GTAGACATCCAAGAAGCACATATTAGGACCAAAGATAGCATCAACTGTATTTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359543.8
CDS-3UTR GCA 90 bp GACAGCTGTGGCGATGGAGGCCAAGGTTTTGGCCTGCTGTGGGGGTTGCATTCATCACCCAGGCTGGAGTaGAGTGGCACGGTCTCGGCT +
Preference number: 4 (lower is better)
Translates to: DSCGDGGQGFGLLWGLHSSPRLE*SGTVSA
Trigger: AGCCGAGACCGTGCCACTGCACTCCAGCCTGGGTGA...TGAATGCAACCCCCACAGCAGGCCAAAACCTTGGCCTCCATCGCCACAGCTGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359543.8
CDS-3UTR TCA 90 bp AGGCCAGCCAGGTGTAGCATGAAGGGCTGGACAAGAAGGGAGAGGCCTTCTGGGGCGCCAGCCTGTTCATaGGGGGTGTCCACAAAAGCA +
Preference number: 4 (lower is better)
Translates to: RPARCSMKGWTRRERPSGAPACS*GVSTKA
Trigger: TGCTTTTGTGGACACCCCTCATGAACAGGCTGGCGC...CCCAGAAGGCCTCTCCCTTCTTGTCCAGCCCTTCATGCTACACCTGGCTGGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359543.8
3UTR CAA 72 bp TTCCACCCACCACTAGCAGAGAGATTCGGGAGGGGCTaGGGCCAGCTGAAACCCATAGGAAGCACGTCCCCA +
Preference number: 4 (lower is better)
Translates to: FHPPLAERFGRG*GQLKPIGSTSP
Trigger: TGGGGACGTGCTTCCTATGGGTTTCAGCTGGCCCAAGCCCCTCCCGAATCTCTCTGCTAGTGGTGGGTGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359543.8
3UTR CAA 72 bp CCCACCCCGATACCGGAGGGATGGCTGGGCTCTGGTTaGGATACAGACAGAATGCCAGGGACTACACCTGCT +
Preference number: 4 (lower is better)
Translates to: PTPIPEGWLGSG*DTDRMPGTTPA
Trigger: AGCAGGTGTAGTCCCTGGCATTCTGTCTGTATCCAAACCAGAGCCCAGCCATCCCTCCGGTATCGGGGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359543.8
CDS-3UTR TCA 90 bp GACAGCTGTGGCGATGGAGGCCAAGGTTTTGGCCTGCTGTGGGGGTTGCATTCAGAACTCCTGACCTTGTaGTCCACCTGCCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: DSCGDGGQGFGLLWGLHSELLTL*STCLSL
Trigger: GAGGCTGAGGCAGGTGGATCACAAGGTCAGGAGTTC...TGAATGCAACCCCCACAGCAGGCCAAAACCTTGGCCTCCATCGCCACAGCTGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359543.8
CDS-3UTR GCA 90 bp ATTGGTGGCTTCTCCATAGGGAGGGGGTCCTATCTCATAGACTCCAAACTTCATGCCGGCGCTGGCGGCTaGGCTGGCAGCTGGATCGAC +
Preference number: 4 (lower is better)
Translates to: IGGFSIGRGSYLIDSKLHAGAGG*AGSWID
Trigger: GTCGATCCAGCTGCCAGCGCAGCCGCCAGCGCCGGC...ATGAAGTTTGGAGTCTATGAGATAGGACCCCCTCCCTATGGAGAAGCCACCAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359543.8
CDS-3UTR TCA 90 bp GACAGCTGTGGCGATGGAGGCCAAGGTTTTGGCCTGCTGTGGGGGTTGCATTCACAGCTCCACTGGAACTaGGCTGATGGCAAACCACCA +
Preference number: 4 (lower is better)
Translates to: DSCGDGGQGFGLLWGLHSQLHWN*ADGKPP
Trigger: TGGTGGTTTGCCATCAGCTCAGTTCCAGTGGAGCTG...TGAATGCAACCCCCACAGCAGGCCAAAACCTTGGCCTCCATCGCCACAGCTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359543.8
CDS-3UTR GCA 90 bp AGGCCAGCCAGGTGTAGCATGAAGGGCTGGACAAGAAGGGAGAGGCCTTCTGGGGCCAGGGACTACACCTaGTTCTCACTTGGAACTTGG +
Preference number: 4 (lower is better)
Translates to: RPARCSMKGWTRRERPSGARDYT*FSLGTW
Trigger: CCAAGTTCCAAGTGAGAAGCAGGTGTAGTCCCTGGC...CCCAGAAGGCCTCTCCCTTCTTGTCCAGCCCTTCATGCTACACCTGGCTGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359543.8
CDS-3UTR GCA 90 bp AGGCCAGCCAGGTGTAGCATGAAGGGCTGGACAAGAAGGGAGAGGCCTTCTGGGGGTTCCTGGGTGGTCTaGATTGCCACACAGCATCAT +
Preference number: 4 (lower is better)
Translates to: RPARCSMKGWTRRERPSGGSWVV*IATQHH
Trigger: ATGATGCTGTGTGGCAATGCAGACCACCCAGGAACC...CCCAGAAGGCCTCTCCCTTCTTGTCCAGCCCTTCATGCTACACCTGGCTGGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359543.8
CDS-3UTR CCA 90 bp TTTCAGACCGCATTCAACACAGATACTCATGTAGCCCCGACGTTTCTTGTGAAGGGGATGTGCCGGCGCTaGCGGCTGCGCTGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: FQTAFNTDTHVAPTFLVKGMCRR*RLRWQL
Trigger: CAGCTGCCAGCGCAGCCGCCAGCGCCGGCACATCCC...CTTCACAAGAAACGTCGGGGCTACATGAGTATCTGTGTTGAATGCGGTCTGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359543.8
CDS-3UTR TCA 90 bp GACAGCTGTGGCGATGGAGGCCAAGGTTTTGGCCTGCTGTGGGGGTTGCATTCAACCTCCCATTTCAAGTaGTTCTCCTGCCTCAGCCAC +
Preference number: 4 (lower is better)
Translates to: DSCGDGGQGFGLLWGLHSTSHFK*FSCLSH
Trigger: GTGGCTGAGGCAGGAGAATCACTTGAAATGGGAGGT...TGAATGCAACCCCCACAGCAGGCCAAAACCTTGGCCTCCATCGCCACAGCTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359543.8
CDS-3UTR TCA 90 bp GACAGCTGTGGCGATGGAGGCCAAGGTTTTGGCCTGCTGTGGGGGTTGCATTCACAGAGTGTGTGGGAGTaGATAGGTCTCCGATGTTCC +
Preference number: 4 (lower is better)
Translates to: DSCGDGGQGFGLLWGLHSQSVWE*IGLRCS
Trigger: GGAACATCGGAGACCTATTCACTCCCACACACTCTG...TGAATGCAACCCCCACAGCAGGCCAAAACCTTGGCCTCCATCGCCACAGCTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359543.8
CDS-3UTR CCA 90 bp TTTGGATACAGACAGAATGCCAGGGACTACACCTGCTTCTCACTTGGAACTTGGGCAGCTCTGCTGACCTaGCCCAGGCACCGTGGTCCC +
Preference number: 4 (lower is better)
Translates to: FGYRQNARDYTCFSLGTWAALLT*PRHRGP
Trigger: GGGACCACGGTGCCTGGGCCAGGTCAGCAGAGCTGC...CCAAGTTCCAAGTGAGAAGCAGGTGTAGTCCCTGGCATTCTGTCTGTATCCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359543.8
CDS-3UTR CCA 90 bp AGGCCAGCCAGGTGTAGCATGAAGGGCTGGACAAGAAGGGAGAGGCCTTCTGGGTGGCACAGGTGGATGTaGGCACTGAATGTTGTACAG +
Preference number: 4 (lower is better)
Translates to: RPARCSMKGWTRRERPSGWHRWM*ALNVVQ
Trigger: CTGTACAACATTCAGTGCCCACATCCACCTGTGCCA...CCCAGAAGGCCTCTCCCTTCTTGTCCAGCCCTTCATGCTACACCTGGCTGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359543.8
CDS-3UTR CCA 90 bp AGGCCAGCCAGGTGTAGCATGAAGGGCTGGACAAGAAGGGAGAGGCCTTCTGGGCACCTGCTTCTCACTTaGAACTTGGGTGAAACCTCT +
Preference number: 4 (lower is better)
Translates to: RPARCSMKGWTRRERPSGHLLLT*NLGETS
Trigger: AGAGGTTTCACCCAAGTTCCAAGTGAGAAGCAGGTG...CCCAGAAGGCCTCTCCCTTCTTGTCCAGCCCTTCATGCTACACCTGGCTGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359543.8
CDS-3UTR CCA 90 bp AGGCCAGCCAGGTGTAGCATGAAGGGCTGGACAAGAAGGGAGAGGCCTTCTGGGTCAGGAATGGAGTTTTaGGGCCCTAGATGTAGACAG +
Preference number: 4 (lower is better)
Translates to: RPARCSMKGWTRRERPSGSGMEF*GPRCRQ
Trigger: CTGTCTACATCTAGGGCCCCAAAACTCCATTCCTGA...CCCAGAAGGCCTCTCCCTTCTTGTCCAGCCCTTCATGCTACACCTGGCTGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359543.8
CDS-3UTR TCA 90 bp CCATGGGCCCCTCCACAGACATGTTTTCTGGGTGTTACACAGACAGGTACTGCCAGTTCGAAACCAGCCTaGCCAACATGGAGAAACCCC +
Preference number: 4 (lower is better)
Translates to: PWAPPQTCFLGVTQTGTASSKPA*PTWRNP
Trigger: GGGGTTTCTCCATGTTGGTCAGGCTGGTTTCGAACT...GGCAGTACCTGTCTGTGTAACACCCAGAAAACATGTCTGTGGAGGGGCCCATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359543.8
CDS-3UTR TCA 90 bp AGGCCAGCCAGGTGTAGCATGAAGGGCTGGACAAGAAGGGAGAGGCCTTCTGGGTTTCTTCATCATCAGTaGACACAGAGCGTCCTAGAG +
Preference number: 4 (lower is better)
Translates to: RPARCSMKGWTRRERPSGFLHHQ*TQSVLE
Trigger: CTCTAGGACGCTCTGTGTTCACTGATGATGAAGAAA...CCCAGAAGGCCTCTCCCTTCTTGTCCAGCCCTTCATGCTACACCTGGCTGGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359543.8
CDS-3UTR GCA 90 bp ACCATGGGCCCCTCCACAGACATGTTTTCTGGGTGTTACACAGACAGGTACTGCAGGAGTAGCCGTAGCTaGCTTCTCTGGTCACGGGAT +
Preference number: 4 (lower is better)
Translates to: TMGPSTDMFSGCYTDRYCRSSRS*LLWSRD
Trigger: ATCCCGTGACCAGAGAAGGCAGCTACGGCTACTCCT...GCAGTACCTGTCTGTGTAACACCCAGAAAACATGTCTGTGGAGGGGCCCATGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359543.8
CDS-3UTR GCA 90 bp GACAGCTGTGGCGATGGAGGCCAAGGTTTTGGCCTGCTGTGGGGGTTGCATTCACAGAGCCTCACACAGTaGCTGGAACATGGTAAACAT +
Preference number: 4 (lower is better)
Translates to: DSCGDGGQGFGLLWGLHSQSLTQ*LEHGKH
Trigger: ATGTTTACCATGTTCCAGGCACTGTGTGAGGCTCTG...TGAATGCAACCCCCACAGCAGGCCAAAACCTTGGCCTCCATCGCCACAGCTGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359543.8
CDS-3UTR CCA 90 bp ACCATGGGCCCCTCCACAGACATGTTTTCTGGGTGTTACACAGACAGGTACTGCCCTGTACTGCATTGGTaGCTTCTCCATAGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: TMGPSTDMFSGCYTDRYCPVLHW*LLHREG
Trigger: CCCCTCCCTATGGAGAAGCCACCAATGCAGTACAGG...GCAGTACCTGTCTGTGTAACACCCAGAAAACATGTCTGTGGAGGGGCCCATGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359543.8
CDS-3UTR GCA 90 bp GTTGTACAGCAGTGGCAACCAGCCGGGAAAATCCATAGGATCATTTCAGACCGCACGCATCTGAAGCGTTaGCCAGGGAGCGCGTTAGAA +
Preference number: 4 (lower is better)
Translates to: VVQQWQPAGKIHRIISDRTHLKR*PGSALE
Trigger: TTCTAACGCGCTCCCTGGGCAACGCTTCAGATGCGT...GCGGTCTGAAATGATCCTATGGATTTTCCCGGCTGGTTGCCACTGCTGTACAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359543.8
CDS-3UTR GCA 90 bp CCATGGGCCCCTCCACAGACATGTTTTCTGGGTGTTACACAGACAGGTACTGCCCAGCCCCCAGCATCCTaGTCCAACATAAGCAGAAAA +
Preference number: 4 (lower is better)
Translates to: PWAPPQTCFLGVTQTGTAQPPAS*SNISRK
Trigger: TTTTCTGCTTATGTTGGAGCAGGATGCTGGGGGCTG...GGCAGTACCTGTCTGTGTAACACCCAGAAAACATGTCTGTGGAGGGGCCCATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359543.8
CDS-3UTR CCA 90 bp AGGCCAGCCAGGTGTAGCATGAAGGGCTGGACAAGAAGGGAGAGGCCTTCTGGGAGACATGACATTAGCTaGATGATGGAGGTTAGGACA +
Preference number: 4 (lower is better)
Translates to: RPARCSMKGWTRRERPSGRHDIS*MMEVRT
Trigger: TGTCCTAACCTCCATCATCCAGCTAATGTCATGTCT...CCCAGAAGGCCTCTCCCTTCTTGTCCAGCCCTTCATGCTACACCTGGCTGGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359543.8
CDS-3UTR CCA 90 bp CCATGGGCCCCTCCACAGACATGTTTTCTGGGTGTTACACAGACAGGTACTGCCAGATGTAGACAGCTGTaGCGATGGAGGCCAAGGTTT +
Preference number: 4 (lower is better)
Translates to: PWAPPQTCFLGVTQTGTARCRQL*RWRPRF
Trigger: AAACCTTGGCCTCCATCGCCACAGCTGTCTACATCT...GGCAGTACCTGTCTGTGTAACACCCAGAAAACATGTCTGTGGAGGGGCCCATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359543.8
CDS-3UTR CCA 90 bp GTTGTACAGCAGTGGCAACCAGCCGGGAAAATCCATAGGATCATTTCAGACCGCCGATGCAGCAGAGAATaGTGGAGAGGATCATGGTGG +
Preference number: 4 (lower is better)
Translates to: VVQQWQPAGKIHRIISDRRCSRE*WRGSWW
Trigger: CCACCATGATCCTCTCCACCATTCTCTGCTGCATCG...GCGGTCTGAAATGATCCTATGGATTTTCCCGGCTGGTTGCCACTGCTGTACAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359543.8
CDS-3UTR CCA 90 bp CTACACCTGCTTCTCACTTGGAACTTGGGTGAAACCTCTCAGGAAGCTGTCATTGGTTTTGGCCTGCTGTaGGGGTTGCATTCACCTCCC +
Preference number: 4 (lower is better)
Translates to: LHLLLTWNLGETSQEAVIGFGLL*GLHSPP
Trigger: GGGAGGTGAATGCAACCCCCACAGCAGGCCAAAACC...AATGACAGCTTCCTGAGAGGTTTCACCCAAGTTCCAAGTGAGAAGCAGGTGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359543.8
CDS-3UTR CCA 90 bp ACCATGGGCCCCTCCACAGACATGTTTTCTGGGTGTTACACAGACAGGTACTGCCACATGGCTCAGGAATaGAGTTTTGGGGCCCTAGAT +
Preference number: 4 (lower is better)
Translates to: TMGPSTDMFSGCYTDRYCHMAQE*SFGALD
Trigger: ATCTAGGGCCCCAAAACTCCATTCCTGAGCCATGTG...GCAGTACCTGTCTGTGTAACACCCAGAAAACATGTCTGTGGAGGGGCCCATGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000359543.8
CDS-3UTR CCA 90 bp GTTGTACAGCAGTGGCAACCAGCCGGGAAAATCCATAGGATCATTTCAGACCGCCACCCTGTACTGCATTaGTGGCTTCTCCATAGGGAG +
Preference number: 4 (lower is better)
Translates to: VVQQWQPAGKIHRIISDRHPVLH*WLLHRE
Trigger: CTCCCTATGGAGAAGCCACCAATGCAGTACAGGGTG...GCGGTCTGAAATGATCCTATGGATTTTCCCGGCTGGTTGCCACTGCTGTACAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359543.8
CDS-3UTR CCA 90 bp CCATGGGCCCCTCCACAGACATGTTTTCTGGGTGTTACACAGACAGGTACTGCCAATGTTGTACAGCAGTaGCAACCAGCCGGGAAAATC +
Preference number: 4 (lower is better)
Translates to: PWAPPQTCFLGVTQTGTANVVQQ*QPAGKI
Trigger: GATTTTCCCGGCTGGTTGCCACTGCTGTACAACATT...GGCAGTACCTGTCTGTGTAACACCCAGAAAACATGTCTGTGGAGGGGCCCATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359543.8
CDS-3UTR TCA 90 bp TTTCAGACCGCATTCAACACAGATACTCATGTAGCCCCGACGTTTCTTGTGAAGTGTCGACGGTGGCAATaGACAGCAAGGCTGCAGAGG +
Preference number: 4 (lower is better)
Translates to: FQTAFNTDTHVAPTFLVKCRRWQ*TARLQR
Trigger: CCTCTGCAGCCTTGCTGTTCATTGCCACCGTCGACA...CTTCACAAGAAACGTCGGGGCTACATGAGTATCTGTGTTGAATGCGGTCTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359543.8
CDS-3UTR TCA 90 bp ATTGGTGGCTTCTCCATAGGGAGGGGGTCCTATCTCATAGACTCCAAACTTCATGCTGGAGCACGAAGATaGAGAAGGCGATGCAGCAGA +
Preference number: 4 (lower is better)
Translates to: IGGFSIGRGSYLIDSKLHAGARR*RRRCSR
Trigger: TCTGCTGCATCGCCTTCTTCATCTTCGTGCTCCAGC...ATGAAGTTTGGAGTCTATGAGATAGGACCCCCTCCCTATGGAGAAGCCACCAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359543.8
CDS-3UTR TCA 90 bp TTTGGATACAGACAGAATGCCAGGGACTACACCTGCTTCTCACTTGGAACTTGGGGTGGATGGGTCCTCTaGGGCTCTAGAAATAGGGGT +
Preference number: 4 (lower is better)
Translates to: FGYRQNARDYTCFSLGTWGGWVL*GSRNRG
Trigger: ACCCCTATTTCTAGAGCCTCAGAGGACCCATCCACC...CCAAGTTCCAAGTGAGAAGCAGGTGTAGTCCCTGGCATTCTGTCTGTATCCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359543.8
CDS-3UTR TCA 90 bp ACCATGGGCCCCTCCACAGACATGTTTTCTGGGTGTTACACAGACAGGTACTGCATTCAACTTCCTCCATaGGCTTGGGTAGCATCCTGT +
Preference number: 4 (lower is better)
Translates to: TMGPSTDMFSGCYTDRYCIQLPP*AWVASC
Trigger: ACAGGATGCTACCCAAGCTCATGGAGGAAGTTGAAT...GCAGTACCTGTCTGTGTAACACCCAGAAAACATGTCTGTGGAGGGGCCCATGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359543.8
CDS-3UTR GCA 90 bp CTACACCTGCTTCTCACTTGGAACTTGGGTGAAACCTCTCAGGAAGCTGTCATTAGAGGGTATCCCCTGTaGCTGGCACATGCATGCAAG +
Preference number: 4 (lower is better)
Translates to: LHLLLTWNLGETSQEAVIRGYPL*LAHACK
Trigger: CTTGCATGCATGTGCCAGGCACAGGGGATACCCTCT...AATGACAGCTTCCTGAGAGGTTTCACCCAAGTTCCAAGTGAGAAGCAGGTGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359543.8
CDS-3UTR GCA 90 bp GAGACTTTTGAGTGGGCAGCAGTTCTGAATACCAGCCTTCATAGTCTATTCTCTTCGCCTGGGCTGGAGTaGAGTGGTGAATCTCGGCTC +
Preference number: 4 (lower is better)
Translates to: ETFEWAAVLNTSLHSLFSSPGLE*SGESRL
Trigger: GAGCCGAGATTCACCACTGCACTCCAGCCCAGGCGA...AGAGAATAGACTATGAAGGCTGGTATTCAGAACTGCTGCCCACTCAAAAGTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359543.8
CDS-3UTR CCA 90 bp TTTGGATACAGACAGAATGCCAGGGACTACACCTGCTTCTCACTTGGAACTTGGGGACCGCCTGCAGCGTaGAGTACTCTTGAAAGCTGT +
Preference number: 4 (lower is better)
Translates to: FGYRQNARDYTCFSLGTWGPPAA*STLESC
Trigger: ACAGCTTTCAAGAGTACTCCACGCTGCAGGCGGTCC...CCAAGTTCCAAGTGAGAAGCAGGTGTAGTCCCTGGCATTCTGTCTGTATCCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359543.8
CDS-3UTR CCA 90 bp TTTCAGACCGCATTCAACACAGATACTCATGTAGCCCCGACGTTTCTTGTGAAGCCGATACCGGAGGGATaGCTGGGCTCTGGTTTGGAT +
Preference number: 4 (lower is better)
Translates to: FQTAFNTDTHVAPTFLVKPIPEG*LGSGLD
Trigger: ATCCAAACCAGAGCCCAGCCATCCCTCCGGTATCGG...CTTCACAAGAAACGTCGGGGCTACATGAGTATCTGTGTTGAATGCGGTCTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359543.8
CDS-3UTR CCA 90 bp ACCATGGGCCCCTCCACAGACATGTTTTCTGGGTGTTACACAGACAGGTACTGCAAAACTCCAGCTCTATaGGACCCTCTCACCGCATTT +
Preference number: 4 (lower is better)
Translates to: TMGPSTDMFSGCYTDRYCKTPAL*DPLTAF
Trigger: AAATGCGGTGAGAGGGTCCCATAGAGCTGGAGTTTT...GCAGTACCTGTCTGTGTAACACCCAGAAAACATGTCTGTGGAGGGGCCCATGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359543.8
CDS-3UTR CCA 90 bp TTACACAGACAGGTACTGCCCAATAACTGTCATCTGCACGAACTGAATGGAGCTGGGATGGTTCCTGGGTaGTCTGCATTGCCACACAGC +
Preference number: 4 (lower is better)
Translates to: LHRQVLPNNCHLHELNGAGMVPG*SALPHS
Trigger: GCTGTGTGGCAATGCAGACCACCCAGGAACCATCCC...AGCTCCATTCAGTTCGTGCAGATGACAGTTATTGGGCAGTACCTGTCTGTGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359543.8
3UTR CAA 72 bp TCCTGGGTGGTCTGCATTGCCACACAGCATCATGCTTaGATCCTGAAGGACAAGGCCCCAAAAGCCCTATTT +
Preference number: 4 (lower is better)
Translates to: SWVVCIATQHHA*ILKDKAPKALF
Trigger: AAATAGGGCTTTTGGGGCCTTGTCCTTCAGGATCAAAGCATGATGCTGTGTGGCAATGCAGACCACCCAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359543.8
CDS-3UTR TCA 90 bp CTACACCTGCTTCTCACTTGGAACTTGGGTGAAACCTCTCAGGAAGCTGTCATTCCTAAGGCAAGCAGGTaGCACTGTCGGCAAATTGAG +
Preference number: 4 (lower is better)
Translates to: LHLLLTWNLGETSQEAVIPKASR*HCRQIE
Trigger: CTCAATTTGCCGACAGTGTCACCTGCTTGCCTTAGG...AATGACAGCTTCCTGAGAGGTTTCACCCAAGTTCCAAGTGAGAAGCAGGTGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359543.8
CDS-3UTR TCA 90 bp TTTGGATACAGACAGAATGCCAGGGACTACACCTGCTTCTCACTTGGAACTTGGCTCCCCATCTCCACATaGCGATACCCCAGCATTTAC +
Preference number: 4 (lower is better)
Translates to: FGYRQNARDYTCFSLGTWLPIST*RYPSIY
Trigger: GTAAATGCTGGGGTATCGTCATGTGGAGATGGGGAG...CCAAGTTCCAAGTGAGAAGCAGGTGTAGTCCCTGGCATTCTGTCTGTATCCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359543.8
CDS-3UTR TCA 90 bp GAGACTTTTGAGTGGGCAGCAGTTCTGAATACCAGCCTTCATAGTCTATTCTCTCAGCCAGGTGTAGCATaGAGGGCTGGACAAGAAGGG +
Preference number: 4 (lower is better)
Translates to: ETFEWAAVLNTSLHSLFSQPGVA*RAGQEG
Trigger: CCCTTCTTGTCCAGCCCTTCATGCTACACCTGGCTG...AGAGAATAGACTATGAAGGCTGGTATTCAGAACTGCTGCCCACTCAAAAGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359543.8
CDS-3UTR TCA 90 bp TTACACAGACAGGTACTGCCCAATAACTGTCATCTGCACGAACTGAATGGAGCTCCACTGGAACTGAGCTaGTGGCAAACCACCACTCCA +
Preference number: 4 (lower is better)
Translates to: LHRQVLPNNCHLHELNGAPLELS*WQTTTP
Trigger: TGGAGTGGTGGTTTGCCATCAGCTCAGTTCCAGTGG...AGCTCCATTCAGTTCGTGCAGATGACAGTTATTGGGCAGTACCTGTCTGTGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359543.8
CDS-3UTR GCA 90 bp ACGCAAACTATAGCAGAGTGTGTGGGAGTGAATAGGTCTCCGATGTTCCTGTATACAAACCTCTCTCCCTaGTTCAGGCGGAAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: TQTIAECVGVNRSPMFLYTNLSP*FRRKSW
Trigger: CCAGCTCTTCCGCCTGAAGCAGGGAGAGAGGTTTGT...ATACAGGAACATCGGAGACCTATTCACTCCCACACACTCTGCTATAGTTTGCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359543.8
CDS-3UTR GCA 90 bp GCCAGGGACTACACCTGCTTCTCACTTGGAACTTGGGTGAAACCTCTCAGGAAGGGGCGCTGTAGGTTTTaGCTAAAGACGAGTCTAAAT +
Preference number: 4 (lower is better)
Translates to: ARDYTCFSLGTWVKPLRKGRCRF*LKTSLN
Trigger: ATTTAGACTCGTCTTTAGGCAAAACCTACAGCGCCC...CTTCCTGAGAGGTTTCACCCAAGTTCCAAGTGAGAAGCAGGTGTAGTCCCTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359543.8
CDS-3UTR GCA 90 bp CCATGGGCCCCTCCACAGACATGTTTTCTGGGTGTTACACAGACAGGTACTGCCCCTGTGCCTGGCACATaGATGCAAGTTATGATTTAT +
Preference number: 4 (lower is better)
Translates to: PWAPPQTCFLGVTQTGTAPVPGT*MQVMIY
Trigger: ATAAATCATAACTTGCATGCATGTGCCAGGCACAGG...GGCAGTACCTGTCTGTGTAACACCCAGAAAACATGTCTGTGGAGGGGCCCATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359543.8
CDS-3UTR GCA 90 bp ATGTTTTCTGGGTGTTACACAGACAGGTACTGCCCAATAACTGTCATCTGCACGGGGATTACAGGCACCTaGCACCACACCGGGCTAATT +
Preference number: 4 (lower is better)
Translates to: MFSGCYTDRYCPITVICTGITGT*HHTGLI
Trigger: AATTAGCCCGGTGTGGTGGCAGGTGCCTGTAATCCC...CGTGCAGATGACAGTTATTGGGCAGTACCTGTCTGTGTAACACCCAGAAAACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359543.8
CDS-3UTR GCA 90 bp CCATGGGCCCCTCCACAGACATGTTTTCTGGGTGTTACACAGACAGGTACTGCCTTCCAACTTCCCAAATaGATGTCATACAGCAGGGAA +
Preference number: 4 (lower is better)
Translates to: PWAPPQTCFLGVTQTGTAFQLPK*MSYSRE
Trigger: TTCCCTGCTGTATGACATGCATTTGGGAAGTTGGAA...GGCAGTACCTGTCTGTGTAACACCCAGAAAACATGTCTGTGGAGGGGCCCATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359543.8
CDS-3UTR GCA 90 bp ATTGGTGGCTTCTCCATAGGGAGGGGGTCCTATCTCATAGACTCCAAACTTCATAATCAGCTGACCCCCTaGCCCTCAAAATGGCAGCAT +
Preference number: 4 (lower is better)
Translates to: IGGFSIGRGSYLIDSKLHNQLTP*PSKWQH
Trigger: ATGCTGCCATTTTGAGGGGCAGGGGGTCAGCTGATT...ATGAAGTTTGGAGTCTATGAGATAGGACCCCCTCCCTATGGAGAAGCCACCAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000359543.8
CDS-3UTR CCA 90 bp ACCATGGGCCCCTCCACAGACATGTTTTCTGGGTGTTACACAGACAGGTACTGCGTTGAGACTTTTGAGTaGGCAGCAGTTCTGAATACC +
Preference number: 4 (lower is better)
Translates to: TMGPSTDMFSGCYTDRYCVETFE*AAVLNT
Trigger: GGTATTCAGAACTGCTGCCCACTCAAAAGTCTCAAC...GCAGTACCTGTCTGTGTAACACCCAGAAAACATGTCTGTGGAGGGGCCCATGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359543.8
CDS-3UTR CCA 90 bp ACTATAGCAGAGTGTGTGGGAGTGAATAGGTCTCCGATGTTCCTGTATTCAGGTTACCGGAGGGATGGCTaGGCTCTGGTTTGGATACAG +
Preference number: 4 (lower is better)
Translates to: TIAECVGVNRSPMFLYSGYRRDG*ALVWIQ
Trigger: CTGTATCCAAACCAGAGCCCAGCCATCCCTCCGGTA...ACCTGAATACAGGAACATCGGAGACCTATTCACTCCCACACACTCTGCTATAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359543.8
CDS-3UTR CCA 90 bp TTTGGATACAGACAGAATGCCAGGGACTACACCTGCTTCTCACTTGGAACTTGGCAGCCACCTGATAGCTaGGATTACAGGCATGCACCA +
Preference number: 4 (lower is better)
Translates to: FGYRQNARDYTCFSLGTWQPPDS*DYRHAP
Trigger: TGGTGCATGCCTGTAATCCCAGCTATCAGGTGGCTG...CCAAGTTCCAAGTGAGAAGCAGGTGTAGTCCCTGGCATTCTGTCTGTATCCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359543.8
CDS-3UTR CCA 90 bp CCATGGGCCCCTCCACAGACATGTTTTCTGGGTGTTACACAGACAGGTACTGCCCACAGACATGTTTTCTaGGTGTTACACAGACAGGTA +
Preference number: 4 (lower is better)
Translates to: PWAPPQTCFLGVTQTGTAHRHVF*VLHRQV
Trigger: TACCTGTCTGTGTAACACCCAGAAAACATGTCTGTG...GGCAGTACCTGTCTGTGTAACACCCAGAAAACATGTCTGTGGAGGGGCCCATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359543.8
CDS-3UTR TCA 90 bp TTTGGATACAGACAGAATGCCAGGGACTACACCTGCTTCTCACTTGGAACTTGGAGTGGGCAGCAGTTCTaGATACCAGCCTTCATAGTC +
Preference number: 4 (lower is better)
Translates to: FGYRQNARDYTCFSLGTWSGQQF*IPAFIV
Trigger: GACTATGAAGGCTGGTATTCAGAACTGCTGCCCACT...CCAAGTTCCAAGTGAGAAGCAGGTGTAGTCCCTGGCATTCTGTCTGTATCCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359543.8
CDS-3UTR TCA 90 bp TGGGCTCTGGTTTGGATACAGACAGAATGCCAGGGACTACACCTGCTTCTCACTAACCAAGATTCAAAATaGACCTCTAGGCCTTGCCCT +
Preference number: 4 (lower is better)
Translates to: WALVWIQTECQGLHLLLTNQDSK*TSRPCP
Trigger: AGGGCAAGGCCTAGAGGTTCATTTTGAATCTTGGTT...AGTGAGAAGCAGGTGTAGTCCCTGGCATTCTGTCTGTATCCAAACCAGAGCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359543.8
CDS-3UTR GCA 90 bp CTTGTTGAGACTTTTGAGTGGGCAGCAGTTCTGAATACCAGCCTTCATAGTCTAGCCAAGGTTTTGGCCTaGTGTGGGGGTTGCATTCAC +
Preference number: 4 (lower is better)
Translates to: LVETFEWAAVLNTSLHSLAKVLA*CGGCIH
Trigger: GTGAATGCAACCCCCACAGCAGGCCAAAACCTTGGC...TAGACTATGAAGGCTGGTATTCAGAACTGCTGCCCACTCAAAAGTCTCAACAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359543.8
CDS-3UTR GCA 90 bp GTTGTACAGCAGTGGCAACCAGCCGGGAAAATCCATAGGATCATTTCAGACCGCAGGGAATTGATGTATTaGTTGAGGGGGTCGATCTCT +
Preference number: 4 (lower is better)
Translates to: VVQQWQPAGKIHRIISDRRELMY*LRGSIS
Trigger: AGAGATCGACCCCCTCAAGCAATACATCAATTCCCT...GCGGTCTGAAATGATCCTATGGATTTTCCCGGCTGGTTGCCACTGCTGTACAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359543.8
CDS-3UTR CCA 90 bp CTACACCTGCTTCTCACTTGGAACTTGGGTGAAACCTCTCAGGAAGCTGTCATTTTCAGGCGGAAGAGCTaGAGCACGAAGATGAAGAAG +
Preference number: 4 (lower is better)
Translates to: LHLLLTWNLGETSQEAVIFRRKS*STKMKK
Trigger: CTTCTTCATCTTCGTGCTCCAGCTCTTCCGCCTGAA...AATGACAGCTTCCTGAGAGGTTTCACCCAAGTTCCAAGTGAGAAGCAGGTGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359543.8
CDS-3UTR CCA 90 bp ACTATAGCAGAGTGTGTGGGAGTGAATAGGTCTCCGATGTTCCTGTATTCAGGTGGCTGGGCTCTGGTTTaGATACAGACAGAATGCCAG +
Preference number: 4 (lower is better)
Translates to: TIAECVGVNRSPMFLYSGGWALV*IQTECQ
Trigger: CTGGCATTCTGTCTGTATCCAAACCAGAGCCCAGCC...ACCTGAATACAGGAACATCGGAGACCTATTCACTCCCACACACTCTGCTATAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359543.8
CDS-3UTR CCA 90 bp ACAGACATGTTTTCTGGGTGTTACACAGACAGGTACTGCCCAATAACTGTCATCAGACAGCTGTGGCGATaGAGGCCAAGGTTTTGGCCT +
Preference number: 4 (lower is better)
Translates to: TDMFSGCYTDRYCPITVIRQLWR*RPRFWP
Trigger: AGGCCAAAACCTTGGCCTCCATCGCCACAGCTGTCT...GATGACAGTTATTGGGCAGTACCTGTCTGTGTAACACCCAGAAAACATGTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359543.8
CDS-3UTR CCA 90 bp ATACCTAAATGCCTCCAGGAGCATTTAATAATAGGCACGCGTAAAGCAGCCTCCCCTTCTGGGATAAGATaGGAAGGAGGCTGTACCCCA +
Preference number: 4 (lower is better)
Translates to: IPKCLQEHLIIGTRKAASPSGIR*EGGCTP
Trigger: TGGGGTACAGCCTCCTTCCCATCTTATCCCAGAAGG...GGAGGCTGCTTTACGCGTGCCTATTATTAAATGCTCCTGGAGGCATTTAGGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359543.8
CDS-3UTR TCA 90 bp TTTGGATACAGACAGAATGCCAGGGACTACACCTGCTTCTCACTTGGAACTTGGTGGAGGCCGCAATCATaGCACACAGACATGACATTA +
Preference number: 4 (lower is better)
Translates to: FGYRQNARDYTCFSLGTWWRPQS*HTDMTL
Trigger: TAATGTCATGTCTGTGTGTCATGATTGCGGCCTCCA...CCAAGTTCCAAGTGAGAAGCAGGTGTAGTCCCTGGCATTCTGTCTGTATCCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359543.8
CDS-3UTR GCA 90 bp TTACACAGACAGGTACTGCCCAATAACTGTCATCTGCACGAACTGAATGGAGCTCTGGGTGGTCTGCATTaGCACACAGCATCATGCTTT +
Preference number: 4 (lower is better)
Translates to: LHRQVLPNNCHLHELNGALGGLH*HTASCF
Trigger: AAAGCATGATGCTGTGTGGCAATGCAGACCACCCAG...AGCTCCATTCAGTTCGTGCAGATGACAGTTATTGGGCAGTACCTGTCTGTGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359543.8
CDS-3UTR GCA 90 bp TTACACAGACAGGTACTGCCCAATAACTGTCATCTGCACGAACTGAATGGAGCTCAGGTCACCCTGTACTaGATTGGTGGCTTCTCCATA +
Preference number: 4 (lower is better)
Translates to: LHRQVLPNNCHLHELNGAQVTLY*IGGFSI
Trigger: TATGGAGAAGCCACCAATGCAGTACAGGGTGACCTG...AGCTCCATTCAGTTCGTGCAGATGACAGTTATTGGGCAGTACCTGTCTGTGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359543.8
CDS-3UTR GCA 90 bp GTTGTACAGCAGTGGCAACCAGCCGGGAAAATCCATAGGATCATTTCAGACCGCGGAACATTAGAGTCTTaGTCTGGGCAATCTGGTTTT +
Preference number: 4 (lower is better)
Translates to: VVQQWQPAGKIHRIISDRGTLES*SGQSGF
Trigger: AAAACCAGATTGCCCAGAGCAAGACTCTAATGTTCC...GCGGTCTGAAATGATCCTATGGATTTTCCCGGCTGGTTGCCACTGCTGTACAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359543.8
CDS-3UTR CCA 90 bp GAGACTTTTGAGTGGGCAGCAGTTCTGAATACCAGCCTTCATAGTCTATTCTCTCCCATCACAGCCCCATaGTTAAGAAATGTCCTGCCG +
Preference number: 4 (lower is better)
Translates to: ETFEWAAVLNTSLHSLFSPITAP*LRNVLP
Trigger: CGGCAGGACATTTCTTAACCATGGGGCTGTGATGGG...AGAGAATAGACTATGAAGGCTGGTATTCAGAACTGCTGCCCACTCAAAAGTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359543.8
CDS-3UTR CCA 90 bp TTACACAGACAGGTACTGCCCAATAACTGTCATCTGCACGAACTGAATGGAGCTGGTATCCCCTGTGCCTaGCACATGCATGCAAGTTAT +
Preference number: 4 (lower is better)
Translates to: LHRQVLPNNCHLHELNGAGIPCA*HMHASY
Trigger: ATAACTTGCATGCATGTGCCAGGCACAGGGGATACC...AGCTCCATTCAGTTCGTGCAGATGACAGTTATTGGGCAGTACCTGTCTGTGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359543.8
CDS-3UTR CCA 90 bp TTTCAGACCGCATTCAACACAGATACTCATGTAGCCCCGACGTTTCTTGTGAAGAAAGAGCTTATCTCCTaGGATGGTTCCTGGGTGGTC +
Preference number: 4 (lower is better)
Translates to: FQTAFNTDTHVAPTFLVKKELIS*DGSWVV
Trigger: GACCACCCAGGAACCATCCCAGGAGATAAGCTCTTT...CTTCACAAGAAACGTCGGGGCTACATGAGTATCTGTGTTGAATGCGGTCTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359543.8
CDS-3UTR CCA 90 bp TTACACAGACAGGTACTGCCCAATAACTGTCATCTGCACGAACTGAATGGAGCTGGCAGGGAGGATATCTaGATTTGCTCACCCCTGTAT +
Preference number: 4 (lower is better)
Translates to: LHRQVLPNNCHLHELNGAGREDI*ICSPLY
Trigger: ATACAGGGGTGAGCAAATCCAGATATCCTCCCTGCC...AGCTCCATTCAGTTCGTGCAGATGACAGTTATTGGGCAGTACCTGTCTGTGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359543.8
CDS-3UTR TCA 90 bp ATACCTAAATGCCTCCAGGAGCATTTAATAATAGGCACGCGTAAAGCAGCCTCCTTCGCGTTTTTGTCGTaGATGTCTTCACGCCTGTCT +
Preference number: 4 (lower is better)
Translates to: IPKCLQEHLIIGTRKAASFAFLS*MSSRLS
Trigger: AGACAGGCGTGAAGACATTCACGACAAAAACGCGAA...GGAGGCTGCTTTACGCGTGCCTATTATTAAATGCTCCTGGAGGCATTTAGGTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359543.8
CDS-3UTR TCA 90 bp ATGTTTTCTGGGTGTTACACAGACAGGTACTGCCCAATAACTGTCATCTGCACGCCCCGACGTTTCTTGTaGAGGGAATTGATGTATTGC +
Preference number: 4 (lower is better)
Translates to: MFSGCYTDRYCPITVICTPRRFL*RELMYC
Trigger: GCAATACATCAATTCCCTTCACAAGAAACGTCGGGG...CGTGCAGATGACAGTTATTGGGCAGTACCTGTCTGTGTAACACCCAGAAAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359543.8
CDS-3UTR TCA 90 bp ACGCAAACTATAGCAGAGTGTGTGGGAGTGAATAGGTCTCCGATGTTCCTGTATGCACCAAGTGAGGGCTaGTTCTATCTACAGGTAAGA +
Preference number: 4 (lower is better)
Translates to: TQTIAECVGVNRSPMFLYAPSEG*FYLQVR
Trigger: TCTTACCTGTAGATAGAATCAGCCCTCACTTGGTGC...ATACAGGAACATCGGAGACCTATTCACTCCCACACACTCTGCTATAGTTTGCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359543.8
CDS-3UTR GCA 90 bp GCCAGGGACTACACCTGCTTCTCACTTGGAACTTGGGTGAAACCTCTCAGGAAGTTTGGATTTGAGCATTaGTGGATTTTTGCTTGTGTC +
Preference number: 4 (lower is better)
Translates to: ARDYTCFSLGTWVKPLRKFGFEH*WIFACV
Trigger: GACACAAGCAAAAATCCAGCAATGCTCAAATCCAAA...CTTCCTGAGAGGTTTCACCCAAGTTCCAAGTGAGAAGCAGGTGTAGTCCCTGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359543.8
CDS-3UTR GCA 90 bp ATACCTAAATGCCTCCAGGAGCATTTAATAATAGGCACGCGTAAAGCAGCCTCCTGGATACAGACAGAATaGCAGGGACTACACCTGCTT +
Preference number: 4 (lower is better)
Translates to: IPKCLQEHLIIGTRKAASWIQTE*QGLHLL
Trigger: AAGCAGGTGTAGTCCCTGGCATTCTGTCTGTATCCA...GGAGGCTGCTTTACGCGTGCCTATTATTAAATGCTCCTGGAGGCATTTAGGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359543.8
CDS-3UTR GCA 90 bp ATTGGTGGCTTCTCCATAGGGAGGGGGTCCTATCTCATAGACTCCAAACTTCATTACACAGACAGGTACTaGCCAATAACTGTCATCTGC +
Preference number: 4 (lower is better)
Translates to: IGGFSIGRGSYLIDSKLHYTDRY*PITVIC
Trigger: GCAGATGACAGTTATTGGGCAGTACCTGTCTGTGTA...ATGAAGTTTGGAGTCTATGAGATAGGACCCCCTCCCTATGGAGAAGCCACCAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359543.8
CDS-3UTR TCA 90 bp ACGCAAACTATAGCAGAGTGTGTGGGAGTGAATAGGTCTCCGATGTTCCTGTATAGCGTGGAGTACTCTTaGAAGCTGTCATTGATGACT +
Preference number: 4 (lower is better)
Translates to: TQTIAECVGVNRSPMFLYSVEYS*KLSLMT
Trigger: AGTCATCAATGACAGCTTTCAAGAGTACTCCACGCT...ATACAGGAACATCGGAGACCTATTCACTCCCACACACTCTGCTATAGTTTGCGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359543.8
CDS-3UTR GCA 90 bp CTTGTTGAGACTTTTGAGTGGGCAGCAGTTCTGAATACCAGCCTTCATAGTCTACTTAGTGGTGTTCTTTaGAGCCTCCATCACAGTGTG +
Preference number: 4 (lower is better)
Translates to: LVETFEWAAVLNTSLHSLLSGVL*SLHHSV
Trigger: CACACTGTGATGGAGGCTGCAAAGAACACCACTAAG...TAGACTATGAAGGCTGGTATTCAGAACTGCTGCCCACTCAAAAGTCTCAACAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359543.8
CDS-3UTR GCA 90 bp ATTGGTGGCTTCTCCATAGGGAGGGGGTCCTATCTCATAGACTCCAAACTTCATGAGGATATCTGGATTTaGTCACCCCTGTATTTTCAG +
Preference number: 4 (lower is better)
Translates to: IGGFSIGRGSYLIDSKLHEDIWI*SPLYFQ
Trigger: CTGAAAATACAGGGGTGAGCAAATCCAGATATCCTC...ATGAAGTTTGGAGTCTATGAGATAGGACCCCCTCCCTATGGAGAAGCCACCAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359543.8
CDS-3UTR GCA 90 bp ACGCAAACTATAGCAGAGTGTGTGGGAGTGAATAGGTCTCCGATGTTCCTGTATAAAATGGCAGCATTCTaGCCTAGATGTCATCACCGT +
Preference number: 4 (lower is better)
Translates to: TQTIAECVGVNRSPMFLYKMAAF*PRCHHR
Trigger: ACGGTGATGACATCTAGGGCAGAATGCTGCCATTTT...ATACAGGAACATCGGAGACCTATTCACTCCCACACACTCTGCTATAGTTTGCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359543.8
CDS-3UTR CCA 90 bp ACTATAGCAGAGTGTGTGGGAGTGAATAGGTCTCCGATGTTCCTGTATTCAGGTTTCTCACTTGGAACTTaGGTGAAACCTCTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: TIAECVGVNRSPMFLYSGFSLGT*VKPLRK
Trigger: CTTCCTGAGAGGTTTCACCCAAGTTCCAAGTGAGAA...ACCTGAATACAGGAACATCGGAGACCTATTCACTCCCACACACTCTGCTATAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359543.8
CDS-3UTR CCA 90 bp TGGGCTCTGGTTTGGATACAGACAGAATGCCAGGGACTACACCTGCTTCTCACTGTTTACAAACAGGCTTaGAGTTCTAGGTTTCTTCAT +
Preference number: 4 (lower is better)
Translates to: WALVWIQTECQGLHLLLTVYKQA*SSRFLH
Trigger: ATGAAGAAACCTAGAACTCCAAGCCTGTTTGTAAAC...AGTGAGAAGCAGGTGTAGTCCCTGGCATTCTGTCTGTATCCAAACCAGAGCCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359543.8
CDS-3UTR TCA 90 bp ATACCTAAATGCCTCCAGGAGCATTTAATAATAGGCACGCGTAAAGCAGCCTCCGTCATCTGCACGAACTaGATGGAGCTATATTTAGAC +
Preference number: 4 (lower is better)
Translates to: IPKCLQEHLIIGTRKAASVICTN*MELYLD
Trigger: GTCTAAATATAGCTCCATTCAGTTCGTGCAGATGAC...GGAGGCTGCTTTACGCGTGCCTATTATTAAATGCTCCTGGAGGCATTTAGGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359543.8
CDS-3UTR TCA 90 bp ATGTTTTCTGGGTGTTACACAGACAGGTACTGCCCAATAACTGTCATCTGCACGGTAATAAGCACCAAGTaGGGGCTGATTCTATCTACA +
Preference number: 4 (lower is better)
Translates to: MFSGCYTDRYCPITVICTVISTK*GLILST
Trigger: TGTAGATAGAATCAGCCCTCACTTGGTGCTTATTAC...CGTGCAGATGACAGTTATTGGGCAGTACCTGTCTGTGTAACACCCAGAAAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359543.8
CDS-3UTR GCA 90 bp ACAGACATGTTTTCTGGGTGTTACACAGACAGGTACTGCCCAATAACTGTCATCTGCCACACAGCATCATaGTTTGATCCTGAAGGACAA +
Preference number: 4 (lower is better)
Translates to: TDMFSGCYTDRYCPITVICHTAS*FDPEGQ
Trigger: TTGTCCTTCAGGATCAAAGCATGATGCTGTGTGGCA...GATGACAGTTATTGGGCAGTACCTGTCTGTGTAACACCCAGAAAACATGTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359543.8
CDS-3UTR CCA 90 bp CTACACCTGCTTCTCACTTGGAACTTGGGTGAAACCTCTCAGGAAGCTGTCATTGGATTTGAGCATTGCTaGATTTTTGCTTGTGTCTTG +
Preference number: 4 (lower is better)
Translates to: LHLLLTWNLGETSQEAVIGFEHC*IFACVL
Trigger: CAAGACACAAGCAAAAATCCAGCAATGCTCAAATCC...AATGACAGCTTCCTGAGAGGTTTCACCCAAGTTCCAAGTGAGAAGCAGGTGTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359543.8
CDS-3UTR CCA 90 bp ATGTTTTCTGGGTGTTACACAGACAGGTACTGCCCAATAACTGTCATCTGCACGGTCTATGAGTTCACATaGCTCAGGAATGGAGTTTTG +
Preference number: 4 (lower is better)
Translates to: MFSGCYTDRYCPITVICTVYEFT*LRNGVL
Trigger: CAAAACTCCATTCCTGAGCCATGTGAACTCATAGAC...CGTGCAGATGACAGTTATTGGGCAGTACCTGTCTGTGTAACACCCAGAAAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359543.8
CDS-3UTR TCA 90 bp ACAGACATGTTTTCTGGGTGTTACACAGACAGGTACTGCCCAATAACTGTCATCGAGTGCTTTTGGATTTaGGCATTGCTGGATTTTTGC +
Preference number: 4 (lower is better)
Translates to: TDMFSGCYTDRYCPITVIECFWI*ALLDFC
Trigger: GCAAAAATCCAGCAATGCTCAAATCCAAAAGCACTC...GATGACAGTTATTGGGCAGTACCTGTCTGTGTAACACCCAGAAAACATGTCTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359543.8
CDS-3UTR CCA 90 bp ACTATAGCAGAGTGTGTGGGAGTGAATAGGTCTCCGATGTTCCTGTATTCAGGTAGTCTTAAAATCACCTaGAAATCATTCACCCAGACC +
Preference number: 4 (lower is better)
Translates to: TIAECVGVNRSPMFLYSGSLKIT*KSFTQT
Trigger: GGTCTGGGTGAATGATTTCCAGGTGATTTTAAGACT...ACCTGAATACAGGAACATCGGAGACCTATTCACTCCCACACACTCTGCTATAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359543.8
CDS-3UTR TCA 90 bp GAGACTTTTGAGTGGGCAGCAGTTCTGAATACCAGCCTTCATAGTCTATTCTCTGAATCGTTTTATTTTTaGGACGGAGTCTCAGACTGT +
Preference number: 4 (lower is better)
Translates to: ETFEWAAVLNTSLHSLFSESFYF*DGVSDC
Trigger: ACAGTCTGAGACTCCGTCTCAAAAATAAAACGATTC...AGAGAATAGACTATGAAGGCTGGTATTCAGAACTGCTGCCCACTCAAAAGTCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359543.8
CDS-3UTR TCA 90 bp CTTGTTGAGACTTTTGAGTGGGCAGCAGTTCTGAATACCAGCCTTCATAGTCTATTCTTGCCCACAATATaGCTAGTGAGAGTATCTCAT +
Preference number: 4 (lower is better)
Translates to: LVETFEWAAVLNTSLHSLFLPTI*LVRVSH
Trigger: ATGAGATACTCTCACTAGTCATATTGTGGGCAAGAA...TAGACTATGAAGGCTGGTATTCAGAACTGCTGCCCACTCAAAAGTCTCAACAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359543.8
CDS-3UTR TCA 90 bp ATGTTTTCTGGGTGTTACACAGACAGGTACTGCCCAATAACTGTCATCTGCACGCACATAGCCCCTCAATaGAAGAATTACAGTACTTTA +
Preference number: 4 (lower is better)
Translates to: MFSGCYTDRYCPITVICTHIAPQ*KNYSTL
Trigger: TAAAGTACTGTAATTCTTTCATTGAGGGGCTATGTG...CGTGCAGATGACAGTTATTGGGCAGTACCTGTCTGTGTAACACCCAGAAAACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359543.8
CDS-3UTR CCA 90 bp TCAAATACAGTTGATGCTATCTTTGGTCCTAATATGTGCTTCTTGGATGTCTACCGTAGCTGCCTTCTCTaGTCACGGGATAGAATTTCG +
Preference number: 4 (lower is better)
Translates to: SNTVDAIFGPNMCFLDVYRSCLL*SRDRIS
Trigger: CGAAATTCTATCCCGTGACCAGAGAAGGCAGCTACG...GTAGACATCCAAGAAGCACATATTAGGACCAAAGATAGCATCAACTGTATTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359543.8
3UTR CAA 72 bp AAACTACAGTTCCTTCAAATACAGTTGATGCTATCTTaGGTCCTAATATGTGCTTCTTGGATGTCTACTAAT +
Preference number: 4 (lower is better)
Translates to: KLQFLQIQLMLS*VLICASWMSTN
Trigger: ATTAGTAGACATCCAAGAAGCACATATTAGGACCAAAGATAGCATCAACTGTATTTGAAGGAACTGTAGTTT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359543.8
CDS-3UTR CAA 90 bp AGGCCAGCCAGGTGTAGCATGAAGGGCTGGACAAGAAGGGAGAGGCCTTCTGGGGCGGATCACCTGAGGTaGGGAGTTCGAAACCAGCCT +
Preference number: 5 (lower is better)
Translates to: RPARCSMKGWTRRERPSGADHLR*GVRNQP
Trigger: AGGCTGGTTTCGAACTCCCAACCTCAGGTGATCCGC...CCCAGAAGGCCTCTCCCTTCTTGTCCAGCCCTTCATGCTACACCTGGCTGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359543.8
CDS CCA 90 bp TGGAAAGTTCCATGCATGAGCTCTGCTGGGGAGGACATGGCCGGGTaGGCTAGCAACAAGGGACCCTGGTTGATAAGGAGGTGTCAGGGG +
Preference number: 5 (lower is better)
Translates to: WKVPCMSSAGEDMAG*ASNKGPWLIRRCQG
Trigger: CCCCTGACACCTCCTTATCAACCAGGGTCCCTTGTTGCTAGCCCACCCGGCCATGTCCTCCCCAGCAGAGCTCATGCATGGAACTTTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342147.4
CDS-3UTR CAA 90 bp GCCAGGGACTACACCTGCTTCTCACTTGGAACTTGGGTGAAACCTCTCAGGAAGGGCCTGCTGTGGGGGTaGCATTCACCTCCCCATCTC +
Preference number: 5 (lower is better)
Translates to: ARDYTCFSLGTWVKPLRKGLLWG*HSPPHL
Trigger: GAGATGGGGAGGTGAATGCAACCCCCACAGCAGGCC...CTTCCTGAGAGGTTTCACCCAAGTTCCAAGTGAGAAGCAGGTGTAGTCCCTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359543.8
CDS GCA 90 bp GCCTGGCCAGGATTCTGCATTTCTAACCGGCTCCAGGTGATGCCCTaGTACTTTCTCCCAAAGGATAAGAGGTGGTCCAGGCCCTCAGAG +
Preference number: 5 (lower is better)
Translates to: AWPGFCISNRLQVMP*YFLPKDKRWSRPSE
Trigger: CTCTGAGGGCCTGGACCACCTCTTATCCTTTGGGAGAAAGTAGCAGGGCATCACCTGGAGCCGGTTAGAAATGCAGAATCCTGGCCAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342147.4
CDS GCA 90 bp ACATTTAGGCCAAGAGTCCTCAGCCCTTGGGTCAGAAGATGTGTGTaGCTTCGCAGGGAGGACAACCCCGAATCGTGGTTGAACCTTGGC +
Preference number: 5 (lower is better)
Translates to: TFRPRVLSPWVRRCV*LRREDNPESWLNLG
Trigger: GCCAAGGTTCAACCACGATTCGGGGTTGTCCTCCCTGCGAAGGCACACACATCTTCTGACCCAAGGGCTGAGGACTCTTGGCCTAAATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342147.4
CDS-3UTR CAA 90 bp AGGCCAGCCAGGTGTAGCATGAAGGGCTGGACAAGAAGGGAGAGGCCTTCTGGGGGGAACATTAGAGTCTaGCTCTGGGCAATCTGGTTT +
Preference number: 5 (lower is better)
Translates to: RPARCSMKGWTRRERPSGGNIRV*LWAIWF
Trigger: AAACCAGATTGCCCAGAGCAAGACTCTAATGTTCCC...CCCAGAAGGCCTCTCCCTTCTTGTCCAGCCCTTCATGCTACACCTGGCTGGCCT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000359543.8
CDS GCA 90 bp CTTGGCTCACTGCAACCCTCCCATACTGGGTTCAAGCAATTCTCCTaGCTCAGTCTCACGAGTAGCTGGGATTTAGAGGCATGCACCAGC +
Preference number: 5 (lower is better)
Translates to: LGSLQPSHTGFKQFS*LSLTSSWDLEACTS
Trigger: GCTGGTGCATGCCTCTAAATCCCAGCTACTCGTGAGACTGAGGCAGGAGAATTGCTTGAACCCAGTATGGGAGGGTTGCAGTGAGCCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342147.4
CDS CCA 90 bp TCTCCTGTCTTCAGCCAAAAGCATTCATTTCCCTGTGTGCTTTGGTaGCTGCTGCCCTTCCCCCACTGCCCAAGATGGCCTTCCTTCTAC +
Preference number: 5 (lower is better)
Translates to: SPVFSQKHSFPCVLW*LLPFPHCPRWPSFY
Trigger: GTAGAAGGAAGGCCATCTTGGGCAGTGGGGGAAGGGCAGCAGCCACCAAAGCACACAGGGAAATGAATGCTTTTGGCTGAAGACAGGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000342147.4
CDS CCA 90 bp CGGCTCCAGGTGATGCCCTGCTACTTTCTCCCAAAGGATAAGAGGTaGTCCAGGCCCTCAGAGAGTATGGGAGAAAAGATGAGGCTGAGT +
Preference number: 5 (lower is better)
Translates to: RLQVMPCYFLPKDKR*SRPSESMGEKMRLS
Trigger: ACTCAGCCTCATCTTTTCTCCCATACTCTCTGAGGGCCTGGACCACCTCTTATCCTTTGGGAGAAAGTAGCAGGGCATCACCTGGAGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342147.4
CDS GCA 90 bp CACAGCAGCTCAGCAAGAAGCTCCAGAACCCAAATGCGATTATTGTaGTCATCTCCCCTGACAGGCTCTAGGACCAGGAGCCTCTGGAAT +
Preference number: 5 (lower is better)
Translates to: HSSSARSSRTQMRLL*SSPLTGSRTRSLWN
Trigger: ATTCCAGAGGCTCCTGGTCCTAGAGCCTGTCAGGGGAGATGAGCACAATAATCGCATTTGGGTTCTGGAGCTTCTTGCTGAGCTGCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342147.4
CDS GCA 90 bp CATTCATTTCCCTGTGTGCTTTGGTGGCTGCTGCCCTTCCCCCACTaGCCAAGATGGCCTTCCTTCTACTTTCCAGTTGCCAAGCACAAT +
Preference number: 5 (lower is better)
Translates to: HSFPCVLWWLLPFPH*PRWPSFYFPVAKHN
Trigger: ATTGTGCTTGGCAACTGGAAAGTAGAAGGAAGGCCATCTTGGGCAGTGGGGGAAGGGCAGCAGCCACCAAAGCACACAGGGAAATGAATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000342147.4
CDS GCA 90 bp TCTTCAGCCAAAAGCATTCATTTCCCTGTGTGCTTTGGTGGCTGCTaGCCTTCCCCCACTGCCCAAGATGGCCTTCCTTCTACTTTCCAG +
Preference number: 5 (lower is better)
Translates to: SSAKSIHFPVCFGGC*PSPTAQDGLPSTFQ
Trigger: CTGGAAAGTAGAAGGAAGGCCATCTTGGGCAGTGGGGGAAGGGCAGCAGCCACCAAAGCACACAGGGAAATGAATGCTTTTGGCTGAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000342147.4
CDS GCA 90 bp CTGTCTTCAGCCAAAAGCATTCATTTCCCTGTGTGCTTTGGTGGCTaGTGCCCTTCCCCCACTGCCCAAGATGGCCTTCCTTCTACTTTC +
Preference number: 5 (lower is better)
Translates to: LSSAKSIHFPVCFGG*CPSPTAQDGLPSTF
Trigger: GAAAGTAGAAGGAAGGCCATCTTGGGCAGTGGGGGAAGGGCAGCAGCCACCAAAGCACACAGGGAAATGAATGCTTTTGGCTGAAGACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000342147.4
CDS TCA 90 bp GAAGATGTGTGTGCCTTCGCAGGGAGGACAACCCCGAATCGTGGTTaGACCTTGGCAGGTTCAACATTGAGAACTTTGGCAGGGTTCTCA +
Preference number: 5 (lower is better)
Translates to: EDVCAFAGRTTPNRG*TLAGSTLRTLAGFS
Trigger: TGAGAACCCTGCCAAAGTTCTCAATGTTGAACCTGCCAAGGTTCAACCACGATTCGGGGTTGTCCTCCCTGCGAAGGCACACACATCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342147.4
CDS TCA 90 bp CAAGAAGCTCCAGAACCCAAATGCGATTATTGTGCTCATCTCCCCTaGCAGGCTCTAGGACCAGGAGCCTCTGGAATGGCTCAAATCCTG +
Preference number: 5 (lower is better)
Translates to: QEAPEPKCDYCAHLP*QALGPGASGMAQIL
Trigger: CAGGATTTGAGCCATTCCAGAGGCTCCTGGTCCTAGAGCCTGTCAGGGGAGATGAGCACAATAATCGCATTTGGGTTCTGGAGCTTCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342147.4
CDS GCA 90 bp TGCCTGCCACCATGTAAGATGTGGCTTTGCTCCTCCTTTGCCTTCTaGAGAGGCCTCCCAGACATGTGGAATTGTGAGTCCATTAGACCT +
Preference number: 5 (lower is better)
Translates to: CLPPCKMWLCSSFAF*RGLPDMWNCESIRP
Trigger: AGGTCTAATGGACTCACAATTCCACATGTCTGGGAGGCCTCTGCAGAAGGCAAAGGAGGAGCAAAGCCACATCTTACATGGTGGCAGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342147.4
CDS GCA 90 bp AAAGAATCACAGATGGGAGGACAAACGTCCCTGCCTGCCAGGACCTaGCACCAAAACCTGAACATGGGACGGCCTGAACCTTCACATTTA +
Preference number: 5 (lower is better)
Translates to: KESQMGGQTSLPART*HQNLNMGRPEPSHL
Trigger: TAAATGTGAAGGTTCAGGCCGTCCCATGTTCAGGTTTTGGTGGCAGGTCCTGGCAGGCAGGGACGTTTGTCCTCCCATCTGTGATTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342147.4
CDS GCA 90 bp CATGACATTAGCTGGATGATGGAGGTTAGGACAAACCTCTCTCCCTaGTTCAGGCGGAAGAGCTGGAGCACGAAGATGAAGAAGGCGATG +
Preference number: 5 (lower is better)
Translates to: HDISWMMEVRTNLSP*FRRKSWSTKMKKAM
Trigger: CATCGCCTTCTTCATCTTCGTGCTCCAGCTCTTCCGCCTGAAGCAGGGAGAGAGGTTTGTCCTAACCTCCATCATCCAGCTAATGTCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359543.8
ENST00000536829.1
CDS CCA 90 bp GTCAGAAGATGTGTGTGCCTTCGCAGGGAGGACAACCCCGAATCGTaGTTGAACCTTGGCAGGTTCAACATTGAGAACTTTGGCAGGGTT +
Preference number: 5 (lower is better)
Translates to: VRRCVCLRREDNPES*LNLGRFNIENFGRV
Trigger: AACCCTGCCAAAGTTCTCAATGTTGAACCTGCCAAGGTTCAACCACGATTCGGGGTTGTCCTCCCTGCGAAGGCACACACATCTTCTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342147.4
CDS CCA 90 bp TTATTGTGCTCATCTCCCCTGACAGGCTCTAGGACCAGGAGCCTCTaGAATGGCTCAAATCCTGGCTCTGCTGCTTACTGCACTGTAAAC +
Preference number: 5 (lower is better)
Translates to: LLCSSPLTGSRTRSL*NGSNPGSAAYCTVN
Trigger: GTTTACAGTGCAGTAAGCAGCAGAGCCAGGATTTGAGCCATTCCAGAGGCTCCTGGTCCTAGAGCCTGTCAGGGGAGATGAGCACAATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342147.4
CDS-3UTR CAA 90 bp CTACACCTGCTTCTCACTTGGAACTTGGGTGAAACCTCTCAGGAAGCTGTCATTCCTACCCACCAGGCATaGTCGACGGTGGCAATGAAC +
Preference number: 5 (lower is better)
Translates to: LHLLLTWNLGETSQEAVIPTHQA*STVAMN
Trigger: GTTCATTGCCACCGTCGACAATGCCTGGTGGGTAGG...AATGACAGCTTCCTGAGAGGTTTCACCCAAGTTCCAAGTGAGAAGCAGGTGTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359543.8
CDS TCA 90 bp GGAGGACAACCCCGAATCGTGGTTGAACCTTGGCAGGTTCAACATTaGGAACTTTGGCAGGGTTCTCAACCTGTGATATGGTTCGGCTGT +
Preference number: 5 (lower is better)
Translates to: GGQPRIVVEPWQVQH*ELWQGSQPVIWFGC
Trigger: ACAGCCGAACCATATCACAGGTTGAGAACCCTGCCAAAGTTCTCAATGTTGAACCTGCCAAGGTTCAACCACGATTCGGGGTTGTCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342147.4
CDS-3UTR CAA 90 bp TTTCAGACCGCATTCAACACAGATACTCATGTAGCCCCGACGTTTCTTGTGAAGAGATTCGGGAGGGGCTaGGGCCAGCTGAAACCCATA +
Preference number: 5 (lower is better)
Translates to: FQTAFNTDTHVAPTFLVKRFGRG*GQLKPI
Trigger: TATGGGTTTCAGCTGGCCCAAGCCCCTCCCGAATCT...CTTCACAAGAAACGTCGGGGCTACATGAGTATCTGTGTTGAATGCGGTCTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359543.8
CDS-3UTR CAA 90 bp CTTGTTGAGACTTTTGAGTGGGCAGCAGTTCTGAATACCAGCCTTCATAGTCTAATGGAGGCCAAGGTTTaGGCCTGCTGTGGGGGTTGC +
Preference number: 5 (lower is better)
Translates to: LVETFEWAAVLNTSLHSLMEAKV*ACCGGC
Trigger: GCAACCCCCACAGCAGGCCAAAACCTTGGCCTCCAT...TAGACTATGAAGGCTGGTATTCAGAACTGCTGCCCACTCAAAAGTCTCAACAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359543.8
CDS-3UTR CAA 90 bp GTTGTACAGCAGTGGCAACCAGCCGGGAAAATCCATAGGATCATTTCAGACCGCACACAGCATCATGCTTaGATCCTGAAGGACAAGGCC +
Preference number: 5 (lower is better)
Translates to: VVQQWQPAGKIHRIISDRTQHHA*ILKDKA
Trigger: GGCCTTGTCCTTCAGGATCAAAGCATGATGCTGTGT...GCGGTCTGAAATGATCCTATGGATTTTCCCGGCTGGTTGCCACTGCTGTACAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359543.8
CDS CCA 90 bp TACAACCCACTTCTATTGACTGCAGGACCCAGGTTTCTGCGTGAGTaGCAGGAAAGGAAACTTACATTGTCGACGGTGGCAATGAACAGC +
Preference number: 5 (lower is better)
Translates to: YNPLLLTAGPRFLRE*QERKLTLSTVAMNS
Trigger: GCTGTTCATTGCCACCGTCGACAATGTAAGTTTCCTTTCCTGCCACTCACGCAGAAACCTGGGTCCTGCAGTCAATAGAAGTGGGTTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342147.4
CDS-3UTR CAA 90 bp GTTGTACAGCAGTGGCAACCAGCCGGGAAAATCCATAGGATCATTTCAGACCGCCAGCGTGGAGTACTCTaGAAAGCTGTCATTGATGAC +
Preference number: 5 (lower is better)
Translates to: VVQQWQPAGKIHRIISDRQRGVL*KAVIDD
Trigger: GTCATCAATGACAGCTTTCAAGAGTACTCCACGCTG...GCGGTCTGAAATGATCCTATGGATTTTCCCGGCTGGTTGCCACTGCTGTACAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359543.8
CDS-3UTR CAA 90 bp CCATGGGCCCCTCCACAGACATGTTTTCTGGGTGTTACACAGACAGGTACTGCCCCCAACACCACAAAATaGTCCAACTTGCTCTATTGT +
Preference number: 5 (lower is better)
Translates to: PWAPPQTCFLGVTQTGTAPNTTK*SNLLYC
Trigger: ACAATAGAGCAAGTTGGACAATTTTGTGGTGTTGGG...GGCAGTACCTGTCTGTGTAACACCCAGAAAACATGTCTGTGGAGGGGCCCATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000359543.8
CDS TCA 90 bp CCAATACAACCCACTTCTATTGACTGCAGGACCCAGGTTTCTGCGTaGGTGGCAGGAAAGGAAACTTACATTGTCGACGGTGGCAATGAA +
Preference number: 5 (lower is better)
Translates to: PIQPTSIDCRTQVSA*VAGKETYIVDGGNE
Trigger: TTCATTGCCACCGTCGACAATGTAAGTTTCCTTTCCTGCCACTCACGCAGAAACCTGGGTCCTGCAGTCAATAGAAGTGGGTTGTATTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342147.4
CDS-3UTR CAA 90 bp TTTGGATACAGACAGAATGCCAGGGACTACACCTGCTTCTCACTTGGAACTTGGTCCTGCCGAGTGCTTTaGGATTTGAGCATTGCTGGA +
Preference number: 5 (lower is better)
Translates to: FGYRQNARDYTCFSLGTWSCRVL*DLSIAG
Trigger: TCCAGCAATGCTCAAATCCAAAAGCACTCGGCAGGA...CCAAGTTCCAAGTGAGAAGCAGGTGTAGTCCCTGGCATTCTGTCTGTATCCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359543.8
CDS TCA 90 bp CTTGGCAGGTTCAACATTGAGAACTTTGGCAGGGTTCTCAACCTGTaGTATGGTTCGGCTGTGTCCCCACCCAAATCTCGTATTGTATTC +
Preference number: 5 (lower is better)
Translates to: LGRFNIENFGRVLNL*YGSAVSPPKSRIVF
Trigger: GAATACAATACGAGATTTGGGTGGGGACACAGCCGAACCATATCACAGGTTGAGAACCCTGCCAAAGTTCTCAATGTTGAACCTGCCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342147.4
CDS-3UTR CAA 90 bp GAGACTTTTGAGTGGGCAGCAGTTCTGAATACCAGCCTTCATAGTCTATTCTCTTGGCTGGGCTCTGGTTaGGATACAGACAGAATGCCA +
Preference number: 5 (lower is better)
Translates to: ETFEWAAVLNTSLHSLFSWLGSG*DTDRMP
Trigger: TGGCATTCTGTCTGTATCCAAACCAGAGCCCAGCCA...AGAGAATAGACTATGAAGGCTGGTATTCAGAACTGCTGCCCACTCAAAAGTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359543.8
CDS-3UTR CAA 90 bp GCCAGGGACTACACCTGCTTCTCACTTGGAACTTGGGTGAAACCTCTCAGGAAGCCACAGGCCTCGATTTaGAATCGTTTTATTTTTGAG +
Preference number: 5 (lower is better)
Translates to: ARDYTCFSLGTWVKPLRKPQASI*NRFIFE
Trigger: CTCAAAAATAAAACGATTCAAAATCGAGGCCTGTGG...CTTCCTGAGAGGTTTCACCCAAGTTCCAAGTGAGAAGCAGGTGTAGTCCCTGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359543.8
CDS-3UTR CAA 90 bp ACTATAGCAGAGTGTGTGGGAGTGAATAGGTCTCCGATGTTCCTGTATTCAGGTACTTCCTCCATGAGCTaGGGTAGCATCCTGTTAACC +
Preference number: 5 (lower is better)
Translates to: TIAECVGVNRSPMFLYSGTSSMS*GSILLT
Trigger: GGTTAACAGGATGCTACCCAAGCTCATGGAGGAAGT...ACCTGAATACAGGAACATCGGAGACCTATTCACTCCCACACACTCTGCTATAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359543.8
CDS-3UTR CAA 90 bp ATACCTAAATGCCTCCAGGAGCATTTAATAATAGGCACGCGTAAAGCAGCCTCCCTTCTCACTTGGAACTaGGGTGAAACCTCTCAGGAA +
Preference number: 5 (lower is better)
Translates to: IPKCLQEHLIIGTRKAASLLTWN*GETSQE
Trigger: TTCCTGAGAGGTTTCACCCAAGTTCCAAGTGAGAAG...GGAGGCTGCTTTACGCGTGCCTATTATTAAATGCTCCTGGAGGCATTTAGGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359543.8
CDS-3UTR CAA 90 bp ACGCAAACTATAGCAGAGTGTGTGGGAGTGAATAGGTCTCCGATGTTCCTGTATAAGGGAATTGATGTATaGCTTGAGGGGGTCGATCTC +
Preference number: 5 (lower is better)
Translates to: TQTIAECVGVNRSPMFLYKGIDV*LEGVDL
Trigger: GAGATCGACCCCCTCAAGCAATACATCAATTCCCTT...ATACAGGAACATCGGAGACCTATTCACTCCCACACACTCTGCTATAGTTTGCGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359543.8
CDS-3UTR CAA 90 bp ACCATGGGCCCCTCCACAGACATGTTTTCTGGGTGTTACACAGACAGGTACTGCCCATACATTATTATCTaGATGAGAAATCAGCTGACC +
Preference number: 5 (lower is better)
Translates to: TMGPSTDMFSGCYTDRYCPYIII*MRNQLT
Trigger: GGTCAGCTGATTTCTCATCAAGATAATAATGTATGG...GCAGTACCTGTCTGTGTAACACCCAGAAAACATGTCTGTGGAGGGGCCCATGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359543.8
CDS CCA 90 bp ATCAACGGGAGCCGTATATGTAGGCAGAGTTGGTGGCCACTCGTATaGTGTACTTTTTGGCTTTCTGAGCAATGTTTCTGCCCTTTAATT +
Preference number: 5 (lower is better)
Translates to: INGSRICRQSWWPLV*CTFWLSEQCFCPLI
Trigger: AATTAAAGGGCAGAAACATTGCTCAGAAAGCCAAAAAGTACACCATACGAGTGGCCACCAACTCTGCCTACATATACGGCTCCCGTTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000342147.4
CDS CCA 90 bp AAAGTCCATCTGCATCTTCTTAGTATGTGCCATGATAATATACCCTaGGGGTGCTGGATACGATTCACTAAGGCTGATGGTTTTCCTGCC +
Preference number: 5 (lower is better)
Translates to: KVHLHLLSMCHDNIP*GCWIRFTKADGFPA
Trigger: GGCAGGAAAACCATCAGCCTTAGTGAATCGTATCCAGCACCCCCAGGGTATATTATCATGGCACATACTAAGAAGATGCAGATGGACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342147.4
CDS-3UTR CAA 90 bp ACGCAAACTATAGCAGAGTGTGTGGGAGTGAATAGGTCTCCGATGTTCCTGTATTTTGCTTGTGTCTTGTaGAGACTTTTGAGTGGGCAG +
Preference number: 5 (lower is better)
Translates to: TQTIAECVGVNRSPMFLYFACVL*RLLSGQ
Trigger: CTGCCCACTCAAAAGTCTCAACAAGACACAAGCAAA...ATACAGGAACATCGGAGACCTATTCACTCCCACACACTCTGCTATAGTTTGCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359543.8
CDS-3UTR CAA 90 bp CTTGTTGAGACTTTTGAGTGGGCAGCAGTTCTGAATACCAGCCTTCATAGTCTAACAGGTTTTACCATTTaGGCCAGGCTGGTCTTGAAC +
Preference number: 5 (lower is better)
Translates to: LVETFEWAAVLNTSLHSLTGFTI*ARLVLN
Trigger: GTTCAAGACCAGCCTGGCCAAAATGGTAAAACCTGT...TAGACTATGAAGGCTGGTATTCAGAACTGCTGCCCACTCAAAAGTCTCAACAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359543.8
CDS-3UTR CAA 90 bp ACAGACATGTTTTCTGGGTGTTACACAGACAGGTACTGCCCAATAACTGTCATCAGAGCCAATCCTGCATaGAAGAGATATCCATGGTGG +
Preference number: 5 (lower is better)
Translates to: TDMFSGCYTDRYCPITVIRANPA*KRYPWW
Trigger: CCACCATGGATATCTCTTCAATGCAGGATTGGCTCT...GATGACAGTTATTGGGCAGTACCTGTCTGTGTAACACCCAGAAAACATGTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359543.8
CDS-3UTR CAA 90 bp ACAGACATGTTTTCTGGGTGTTACACAGACAGGTACTGCCCAATAACTGTCATCGAATTGATGTATTGCTaGAGGGGGTCGATCTCTGGT +
Preference number: 5 (lower is better)
Translates to: TDMFSGCYTDRYCPITVIELMYC*RGSISG
Trigger: ACCAGAGATCGACCCCCTCAAGCAATACATCAATTC...GATGACAGTTATTGGGCAGTACCTGTCTGTGTAACACCCAGAAAACATGTCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359543.8
CDS-3UTR CAA 90 bp CTACACCTGCTTCTCACTTGGAACTTGGGTGAAACCTCTCAGGAAGCTGTCATTCTACAGGTAAGAAGCTaGGATGTTTTCTCCCTGATT +
Preference number: 5 (lower is better)
Translates to: LHLLLTWNLGETSQEAVILQVRS*DVFSLI
Trigger: AATCAGGGAGAAAACATCCAAGCTTCTTACCTGTAG...AATGACAGCTTCCTGAGAGGTTTCACCCAAGTTCCAAGTGAGAAGCAGGTGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359543.8
CDS GCA 90 bp AGACTCACCGATGGACAAAAAGTCCATCTGCATCTTCTTAGTATGTaGCATGATAATATACCCTGGGGGTGCTGGATACGATTCACTAAG +
Preference number: 5 (lower is better)
Translates to: RLTDGQKVHLHLLSM*HDNIPWGCWIRFTK
Trigger: CTTAGTGAATCGTATCCAGCACCCCCAGGGTATATTATCATGGCACATACTAAGAAGATGCAGATGGACTTTTTGTCCATCGGTGAGTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000342147.4
CDS CCA 90 bp CGTATATGTAGGCAGAGTTGGTGGCCACTCGTATGGTGTACTTTTTaGCTTTCTGAGCAATGTTTCTGCCCTTTAATTATCTCTGCAGTC +
Preference number: 5 (lower is better)
Translates to: RICRQSWWPLVWCTF*LSEQCFCPLIISAV
Trigger: GACTGCAGAGATAATTAAAGGGCAGAAACATTGCTCAGAAAGCCAAAAAGTACACCATACGAGTGGCCACCAACTCTGCCTACATATACG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000342147.4
CDS-3UTR CAA 90 bp TCAAATACAGTTGATGCTATCTTTGGTCCTAATATGTGCTTCTTGGATGTCTACCCTGGGTGGTCTGCATaGCCACACAGCATCATGCTT +
Preference number: 5 (lower is better)
Translates to: SNTVDAIFGPNMCFLDVYPGWSA*PHSIML
Trigger: AAGCATGATGCTGTGTGGCAATGCAGACCACCCAGG...GTAGACATCCAAGAAGCACATATTAGGACCAAAGATAGCATCAACTGTATTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359543.8
CDS GCA 90 bp GAAGCTTCCCTGATGTCACTCCCTGTTTGGAGGGATATTAATCTATaGCAAGAGGTTATTTATCCAATACATTCCTGCCATATGGCTGCA +
Preference number: 5 (lower is better)
Translates to: EASLMSLPVWRDINL*QEVIYPIHSCHMAA
Trigger: TGCAGCCATATGGCAGGAATGTATTGGATAAATAACCTCTTGGCATAGATTAATATCCCTCCAAACAGGGAGTGACATCAGGGAAGCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342147.4
CDS-3UTR CAA 90 bp ACAGACATGTTTTCTGGGTGTTACACAGACAGGTACTGCCCAATAACTGTCATCCGAGTGCTTTTGGATTaGAGCATTGCTGGATTTTTG +
Preference number: 5 (lower is better)
Translates to: TDMFSGCYTDRYCPITVIRVLLD*SIAGFL
Trigger: CAAAAATCCAGCAATGCTCAAATCCAAAAGCACTCG...GATGACAGTTATTGGGCAGTACCTGTCTGTGTAACACCCAGAAAACATGTCTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359543.8
CDS GCA 90 bp AGGGATATTAATCTATGCCAAGAGGTTATTTATCCAATACATTCCTaGCATATGGCTGCAAGCTGGATACTAAAGGGAAACATTAAATTT +
Preference number: 5 (lower is better)
Translates to: RDINLCQEVIYPIHS*HMAASWILKGNIKF
Trigger: AAATTTAATGTTTCCCTTTAGTATCCAGCTTGCAGCCATATGGCAGGAATGTATTGGATAAATAACCTCTTGGCATAGATTAATATCCCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342147.4
CDS CCA 72 bp GCGGGATGTGCCGGCGCTGGCGGCTGCGCTGGCAGCTaGATCGACGGACTGGCTGGGGGTGCGAGGCGAGGC +
Preference number: 6 (lower is better)
Translates to: AGCAGAGGCAGS*IDGLAGGARRG
Trigger: GCCTCGCCTCGCACCCCCAGCCAGTCCGTCGATCCAGCTGCCAGCGCAGCCGCCAGCGCCGGCACATCCCGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000342147.4
CDS CCA 72 bp GCCCAGAGCGGGATGTGCCGGCGCTGGCGGCTGCGCTaGCAGCTGGATCGACGGACTGGCTGGGGGTGCGAG +
Preference number: 6 (lower is better)
Translates to: AQSGMCRRWRLR*QLDRRTGWGCE
Trigger: CTCGCACCCCCAGCCAGTCCGTCGATCCAGCTGCCAGCGCAGCCGCCAGCGCCGGCACATCCCGCTCTGGGC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000342147.4
CDS GCA 72 bp TTAAAGCCCAGAGCGGGATGTGCCGGCGCTGGCGGCTaGGCTGGCAGCTGGATCGACGGACTGGCTGGGGGT +
Preference number: 6 (lower is better)
Translates to: LKPRAGCAGAGG*AGSWIDGLAGG
Trigger: ACCCCCAGCCAGTCCGTCGATCCAGCTGCCAGCGCAGCCGCCAGCGCCGGCACATCCCGCTCTGGGCTTTAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342147.4
ENST00000359543.8
CDS CCA 72 bp GAGGACATGGCCGGGTGGGCTAGCAACAAGGGACCCTaGTTGATAAGGAGGTGTCAGGGGTTGGGGGCAGAG +
Preference number: 6 (lower is better)
Translates to: EDMAGWASNKGP*LIRRCQGLGAE
Trigger: CTCTGCCCCCAACCCCTGACACCTCCTTATCAACCAGGGTCCCTTGTTGCTAGCCCACCCGGCCATGTCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000342147.4
CDS CCA 72 bp CCATGCATGAGCTCTGCTGGGGAGGACATGGCCGGGTaGGCTAGCAACAAGGGACCCTGGTTGATAAGGAGG +
Preference number: 6 (lower is better)
Translates to: PCMSSAGEDMAG*ASNKGPWLIRR
Trigger: CCTCCTTATCAACCAGGGTCCCTTGTTGCTAGCCCACCCGGCCATGTCCTCCCCAGCAGAGCTCATGCATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342147.4
CDS CAA 90 bp TGGGCTAGCAACAAGGGACCCTGGTTGATAAGGAGGTGTCAGGGGTaGGGGGCAGAGGTCACCTGGGATGGGTCACCTGGAAGATCTAGG +
Preference number: 6 (lower is better)
Translates to: WASNKGPWLIRRCQG*GAEVTWDGSPGRSR
Trigger: CCTAGATCTTCCAGGTGACCCATCCCAGGTGACCTCTGCCCCCAACCCCTGACACCTCCTTATCAACCAGGGTCCCTTGTTGCTAGCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000342147.4
CDS TCA 72 bp CTGCACTGTAAACTCTGCCAAGTGCCCGAATGGCCCTaGGGCGCAGTTCCTTCACCTGTAACCCGGTGCAAG +
Preference number: 6 (lower is better)
Translates to: LHCKLCQVPEWP*GAVPSPVTRCK
Trigger: CTTGCACCGGGTTACAGGTGAAGGAACTGCGCCTCAGGGCCATTCGGGCACTTGGCAGAGTTTACAGTGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342147.4
CDS GCA 72 bp CCAAGAGTCCTCAGCCCTTGGGTCAGAAGATGTGTGTaGCTTCGCAGGGAGGACAACCCCGAATCGTGGTTG +
Preference number: 6 (lower is better)
Translates to: PRVLSPWVRRCV*LRREDNPESWL
Trigger: CAACCACGATTCGGGGTTGTCCTCCCTGCGAAGGCACACACATCTTCTGACCCAAGGGCTGAGGACTCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342147.4
CDS GCA 72 bp GCCAAAAGCATTCATTTCCCTGTGTGCTTTGGTGGCTaGTGCCCTTCCCCCACTGCCCAAGATGGCCTTCCT +
Preference number: 6 (lower is better)
Translates to: AKSIHFPVCFGG*CPSPTAQDGLP
Trigger: AGGAAGGCCATCTTGGGCAGTGGGGGAAGGGCAGCAGCCACCAAAGCACACAGGGAAATGAATGCTTTTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000342147.4
CDS CCA 72 bp TCATCTCCCCTGACAGGCTCTAGGACCAGGAGCCTCTaGAATGGCTCAAATCCTGGCTCTGCTGCTTACTGC +
Preference number: 6 (lower is better)
Translates to: SSPLTGSRTRSL*NGSNPGSAAYC
Trigger: GCAGTAAGCAGCAGAGCCAGGATTTGAGCCATTCCAGAGGCTCCTGGTCCTAGAGCCTGTCAGGGGAGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342147.4
CDS TCA 72 bp CAGGACCTGCCACCAAAACCTGAACATGGGACGGCCTaGACCTTCACATTTAGGCCAAGAGTCCTCAGCCCT +
Preference number: 6 (lower is better)
Translates to: QDLPPKPEHGTA*TFTFRPRVLSP
Trigger: AGGGCTGAGGACTCTTGGCCTAAATGTGAAGGTTCAGGCCGTCCCATGTTCAGGTTTTGGTGGCAGGTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342147.4
CDS GCA 72 bp TCTGTATTTACAGCTGCTCCCCATCACTCACATTACTaGCTGAGCTCTGCCTCCTGTCAGGTCACCAGGGGC +
Preference number: 6 (lower is better)
Translates to: SVFTAAPHHSHY*LSSASCQVTRG
Trigger: GCCCCTGGTGACCTGACAGGAGGCAGAGCTCAGGCAGTAATGTGAGTGATGGGGAGCAGCTGTAAATACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342147.4
CDS CCA 72 bp AGGACAAACCTCTCTCCCTGCTTCAGGCGGAAGAGCTaGAGCACGAAGATGAAGAAGGCGATGCAGCAGAGA +
Preference number: 6 (lower is better)
Translates to: RTNLSPCFRRKS*STKMKKAMQQR
Trigger: TCTCTGCTGCATCGCCTTCTTCATCTTCGTGCTCCAGCTCTTCCGCCTGAAGCAGGGAGAGAGGTTTGTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359543.8
ENST00000536829.1
CDS CCA 72 bp AAGCCCAGAGCGGGATGTGCTGAGATGTTCGGCGTCTaGAGGTCCGAGGCAATCTCCCAATTCAGAAGTGTT +
Preference number: 6 (lower is better)
Translates to: KPRAGCAEMFGV*RSEAISQFRSV
Trigger: AACACTTCTGAATTGGGAGATTGCCTCGGACCTCCAGACGCCGAACATCTCAGCACATCCCGCTCTGGGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536829.1
CDS TCA 72 bp CCAGAACCCAAATGCGATTATTGTGCTCATCTCCCCTaGCAGGCTCTAGGACCAGGAGCCTCTGGAATGGCT +
Preference number: 6 (lower is better)
Translates to: PEPKCDYCAHLP*QALGPGASGMA
Trigger: AGCCATTCCAGAGGCTCCTGGTCCTAGAGCCTGTCAGGGGAGATGAGCACAATAATCGCATTTGGGTTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342147.4
CDS GCA 72 bp CAGGAGCCTCTGGAATGGCTCAAATCCTGGCTCTGCTaGTTACTGCACTGTAAACTCTGCCAAGTGCCCGAA +
Preference number: 6 (lower is better)
Translates to: QEPLEWLKSWLC*LLHCKLCQVPE
Trigger: TTCGGGCACTTGGCAGAGTTTACAGTGCAGTAAGCAGCAGAGCCAGGATTTGAGCCATTCCAGAGGCTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342147.4
CDS GCA 72 bp AGCTGGATGATGGAGGTTAGGACAAACCTCTCTCCCTaGTTCAGGCGGAAGAGCTGGAGCACGAAGATGAAG +
Preference number: 6 (lower is better)
Translates to: SWMMEVRTNLSP*FRRKSWSTKMK
Trigger: CTTCATCTTCGTGCTCCAGCTCTTCCGCCTGAAGCAGGGAGAGAGGTTTGTCCTAACCTCCATCATCCAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359543.8
ENST00000536829.1
CDS CAA 72 bp GTGTGCCTTCGCAGGGAGGACAACCCCGAATCGTGGTaGAACCTTGGCAGGTTCAACATTGAGAACTTTGGC +
Preference number: 6 (lower is better)
Translates to: VCLRREDNPESW*NLGRFNIENFG
Trigger: GCCAAAGTTCTCAATGTTGAACCTGCCAAGGTTCAACCACGATTCGGGGTTGTCCTCCCTGCGAAGGCACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342147.4
CDS TCA 72 bp TGTGCCTTCGCAGGGAGGACAACCCCGAATCGTGGTTaGACCTTGGCAGGTTCAACATTGAGAACTTTGGCA +
Preference number: 6 (lower is better)
Translates to: CAFAGRTTPNRG*TLAGSTLRTLA
Trigger: TGCCAAAGTTCTCAATGTTGAACCTGCCAAGGTTCAACCACGATTCGGGGTTGTCCTCCCTGCGAAGGCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342147.4
CDS TCA 72 bp CCTGGCCAGGATTCTGCATTTCTAACCGGCTCCAGGTaGTGCCCTGCTACTTTCTCCCAAAGGATAAGAGGT +
Preference number: 6 (lower is better)
Translates to: PGQDSAFLTGSR*CPATFSQRIRG
Trigger: ACCTCTTATCCTTTGGGAGAAAGTAGCAGGGCATCACCTGGAGCCGGTTAGAAATGCAGAATCCTGGCCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342147.4
CDS GCA 72 bp CCATGTAAGATGTGGCTTTGCTCCTCCTTTGCCTTCTaGAGAGGCCTCCCAGACATGTGGAATTGTGAGTCC +
Preference number: 6 (lower is better)
Translates to: PCKMWLCSSFAF*RGLPDMWNCES
Trigger: GGACTCACAATTCCACATGTCTGGGAGGCCTCTGCAGAAGGCAAAGGAGGAGCAAAGCCACATCTTACATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342147.4
CDS GCA 72 bp TATAAAGGGCAGTTCCCCTGCACACGCTCTCTTGCCTaGCACCATGTAAGATGTGGCTTTGCTCCTCCTTTG +
Preference number: 6 (lower is better)
Translates to: YKGQFPCTRSLA*HHVRCGFAPPL
Trigger: CAAAGGAGGAGCAAAGCCACATCTTACATGGTGGCAGGCAAGAGAGCGTGTGCAGGGGAACTGCCCTTTATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342147.4
CDS GCA 72 bp TCAGCAAGAAGCTCCAGAACCCAAATGCGATTATTGTaGTCATCTCCCCTGACAGGCTCTAGGACCAGGAGC +
Preference number: 6 (lower is better)
Translates to: SARSSRTQMRLL*SSPLTGSRTRS
Trigger: GCTCCTGGTCCTAGAGCCTGTCAGGGGAGATGAGCACAATAATCGCATTTGGGTTCTGGAGCTTCTTGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342147.4
CDS GCA 72 bp GCAGCCAGTGAAGGCAGCTTCATCTGTATTTACAGCTaGTCCCCATCACTCACATTACTGCCTGAGCTCTGC +
Preference number: 6 (lower is better)
Translates to: AASEGSFICIYS*SPSLTLLPELC
Trigger: GCAGAGCTCAGGCAGTAATGTGAGTGATGGGGAGCAGCTGTAAATACAGATGAAGCTGCCTTCACTGGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342147.4
CDS GCA 72 bp CTGCAACCCTCCCATACTGGGTTCAAGCAATTCTCCTaGCTCAGTCTCACGAGTAGCTGGGATTTAGAGGCA +
Preference number: 6 (lower is better)
Translates to: LQPSHTGFKQFS*LSLTSSWDLEA
Trigger: TGCCTCTAAATCCCAGCTACTCGTGAGACTGAGGCAGGAGAATTGCTTGAACCCAGTATGGGAGGGTTGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342147.4
CDS CAA 90 bp AGAAGATGTGTGTGCCTTCGCAGGGAGGACAACCCCGAATCGTGGTaGAACCTTGGCAGGTTCAACATTGAGAACTTTGGCAGGGTTCTC +
Preference number: 6 (lower is better)
Translates to: RRCVCLRREDNPESW*NLGRFNIENFGRVL
Trigger: GAGAACCCTGCCAAAGTTCTCAATGTTGAACCTGCCAAGGTTCAACCACGATTCGGGGTTGTCCTCCCTGCGAAGGCACACACATCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342147.4
CDS TCA 72 bp CCCACTTCTATTGACTGCAGGACCCAGGTTTCTGCGTaGGTGGCAGGAAAGGAAACTTACATTGTCGACGGT +
Preference number: 6 (lower is better)
Translates to: PTSIDCRTQVSA*VAGKETYIVDG
Trigger: ACCGTCGACAATGTAAGTTTCCTTTCCTGCCACTCACGCAGAAACCTGGGTCCTGCAGTCAATAGAAGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342147.4
CDS CCA 72 bp CTTCTATTGACTGCAGGACCCAGGTTTCTGCGTGAGTaGCAGGAAAGGAAACTTACATTGTCGACGGTGGCA +
Preference number: 6 (lower is better)
Translates to: LLLTAGPRFLRE*QERKLTLSTVA
Trigger: TGCCACCGTCGACAATGTAAGTTTCCTTTCCTGCCACTCACGCAGAAACCTGGGTCCTGCAGTCAATAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342147.4
CDS CCA 72 bp TGTGTGTGCCTTCGCAGGGAGGACAACCCCGAATCGTaGTTGAACCTTGGCAGGTTCAACATTGAGAACTTT +
Preference number: 6 (lower is better)
Translates to: CVCLRREDNPES*LNLGRFNIENF
Trigger: AAAGTTCTCAATGTTGAACCTGCCAAGGTTCAACCACGATTCGGGGTTGTCCTCCCTGCGAAGGCACACACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342147.4
CDS CCA 72 bp GTGATGCCCTGCTACTTTCTCCCAAAGGATAAGAGGTaGTCCAGGCCCTCAGAGAGTATGGGAGAAAAGATG +
Preference number: 6 (lower is better)
Translates to: VMPCYFLPKDKR*SRPSESMGEKM
Trigger: CATCTTTTCTCCCATACTCTCTGAGGGCCTGGACCACCTCTTATCCTTTGGGAGAAAGTAGCAGGGCATCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342147.4
CDS TCA 72 bp CCCCGAATCGTGGTTGAACCTTGGCAGGTTCAACATTaGGAACTTTGGCAGGGTTCTCAACCTGTGATATGG +
Preference number: 6 (lower is better)
Translates to: PRIVVEPWQVQH*ELWQGSQPVIW
Trigger: CCATATCACAGGTTGAGAACCCTGCCAAAGTTCTCAATGTTGAACCTGCCAAGGTTCAACCACGATTCGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342147.4
CDS TCA 72 bp AGTGGCAAGGTTGAGAACTCTGATCTAGAGGAAAGCTaGAGTCACACAACATCCTCAAAGGGCTTCCTAGAG +
Preference number: 6 (lower is better)
Translates to: SGKVENSDLEES*SHTTSSKGFLE
Trigger: CTCTAGGAAGCCCTTTGAGGATGTTGTGTGACTTCAGCTTTCCTCTAGATCAGAGTTCTCAACCTTGCCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342147.4
CDS CCA 72 bp CTTAGTATGTGCCATGATAATATACCCTGGGGGTGCTaGATACGATTCACTAAGGCTGATGGTTTTCCTGCC +
Preference number: 6 (lower is better)
Translates to: LSMCHDNIPWGC*IRFTKADGFPA
Trigger: GGCAGGAAAACCATCAGCCTTAGTGAATCGTATCCAGCACCCCCAGGGTATATTATCATGGCACATACTAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000342147.4
CDS CCA 72 bp CTGCATCTTCTTAGTATGTGCCATGATAATATACCCTaGGGGTGCTGGATACGATTCACTAAGGCTGATGGT +
Preference number: 6 (lower is better)
Translates to: LHLLSMCHDNIP*GCWIRFTKADG
Trigger: ACCATCAGCCTTAGTGAATCGTATCCAGCACCCCCAGGGTATATTATCATGGCACATACTAAGAAGATGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342147.4
CDS GCA 72 bp CTTCTTAGTATGTGCCATGATAATATACCCTGGGGGTaGTGGATACGATTCACTAAGGCTGATGGTTTTCCT +
Preference number: 6 (lower is better)
Translates to: LLSMCHDNIPWG*WIRFTKADGFP
Trigger: AGGAAAACCATCAGCCTTAGTGAATCGTATCCAGCACCCCCAGGGTATATTATCATGGCACATACTAAGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000342147.4
CDS GCA 72 bp GATGGACAAAAAGTCCATCTGCATCTTCTTAGTATGTaGCATGATAATATACCCTGGGGGTGCTGGATACGA +
Preference number: 6 (lower is better)
Translates to: DGQKVHLHLLSM*HDNIPWGCWIR
Trigger: TCGTATCCAGCACCCCCAGGGTATATTATCATGGCACATACTAAGAAGATGCAGATGGACTTTTTGTCCATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000342147.4
CDS CAA 72 bp TTCTCCATGGGACATTTAACAATGTCTGAAGATATTTaGGATTGTCATAACCAGGGGTGGGGGAGCTACTGC +
Preference number: 6 (lower is better)
Translates to: FSMGHLTMSEDI*DCHNQGWGSYC
Trigger: GCAGTAGCTCCCCCACCCCTGGTTATGACAATCCAAAATATCTTCAGACATTGTTAAATGTCCCATGGAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000342147.4
CDS TCA 72 bp TTGGTGGCCACTCGTATGGTGTACTTTTTGGCTTTCTaGGCAATGTTTCTGCCCTTTAATTATCTCTGCAGT +
Preference number: 6 (lower is better)
Translates to: LVATRMVYFLAF*AMFLPFNYLCS
Trigger: ACTGCAGAGATAATTAAAGGGCAGAAACATTGCTCAGAAAGCCAAAAAGTACACCATACGAGTGGCCACCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000342147.4
CDS TCA 72 bp GGATCACATGAGATGACATGCATAAAAGGGCCACAGTaGTCGCTAAGTGACAGGCATTATAGTTTATGTTAC +
Preference number: 6 (lower is better)
Translates to: GSHEMTCIKGPQ*SLSDRHYSLCY
Trigger: GTAACATAAACTATAATGCCTGTCACTTAGCGATCACTGTGGCCCTTTTATGCATGTCATCTCATGTGATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342147.4
CDS GCA 72 bp ATACCCTCAGACTCACCGATGGACAAAAAGTCCATCTaGATCTTCTTAGTATGTGCCATGATAATATACCCT +
Preference number: 6 (lower is better)
Translates to: IPSDSPMDKKSI*IFLVCAMIIYP
Trigger: AGGGTATATTATCATGGCACATACTAAGAAGATGCAGATGGACTTTTTGTCCATCGGTGAGTCTGAGGGTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000342147.4
CDS GCA 72 bp AATCTATGCCAAGAGGTTATTTATCCAATACATTCCTaGCATATGGCTGCAAGCTGGATACTAAAGGGAAAC +
Preference number: 6 (lower is better)
Translates to: NLCQEVIYPIHS*HMAASWILKGN
Trigger: GTTTCCCTTTAGTATCCAGCTTGCAGCCATATGGCAGGAATGTATTGGATAAATAACCTCTTGGCATAGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342147.4