RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EMP1 (Homo sapiens)

Ensembl gene IDs: ENSG00000134531

Ensembl transcript IDs: ENST00000256951.10, ENST00000396301.7, ENST00000431267.2, ENST00000535134.5, ENST00000536383.1, ENST00000537612.1, ENST00000538364.5, ENST00000541935.5, ENST00000542289.1, ENST00000542474.5, ENST00000544053.5, ENST00000546357.1

Found 388 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GAGCTGCCTTGGCTTTCAGCAAGAGGCCTAGCAAAGACCATGGCATaGGGTCTCCATGAGGGACAGCCGTGTGTGAGGTCTCGACTGGGC +
Preference number: 1 (lower is better)
Translates to: ELPWLSARGLAKTMA*GLHEGQPCVRSRLG
Trigger: GCCCAGTCGAGACCTCACACACGGCTGTCCCTCATGGAGACCTCATGCCATGGTCTTTGCTAGGCCTCTTGCTGAAAGCCAAGGCAGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256951.10
3UTR CCA 90 bp CCCAGACAGTGTGTGTCACTAAGAACAGCTGGAGGCCAAGTCTGGTaGCTGCAGGGAGGCTCTCTGGACCCCATCAAGGGAGCATCAAAG +
Preference number: 1 (lower is better)
Translates to: PRQCVSLRTAGGQVW*LQGGSLDPIKGASK
Trigger: CTTTGATGCTCCCTTGATGGGGTCCAGAGAGCCTCCCTGCAGCCACCAGACTTGGCCTCCAGCTGTTCTTAGTGACACACACTGTCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256951.10
ENST00000431267.2
3UTR CCA 90 bp TGTGTTTTAATCAGCTTCCAGAATTGCCATGCCTCACCTGTGAAGTaGGATAGGCAGGGTCCCCAAGAGGTGATCACTCCAGGTGGTGTC +
Preference number: 1 (lower is better)
Translates to: CVLISFQNCHASPVK*DRQGPQEVITPGGV
Trigger: GACACCACCTGGAGTGATCACCTCTTGGGGACCCTGCCTATCCCACTTCACAGGTGAGGCATGGCAATTCTGGAAGCTGATTAAAACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256951.10
3UTR TCA 90 bp CAGCAGAGGACACTCTGGATAGAGCTAGGAGTTTGTTGCAGAGTCTaGCAAAAGTTCCCTCTGCAGAAGGGATGGAAGGATAGCCTTGGG +
Preference number: 1 (lower is better)
Translates to: QQRTLWIELGVCCRV*QKFPLQKGWKDSLG
Trigger: CCCAAGGCTATCCTTCCATCCCTTCTGCAGAGGGAACTTTTGTCAGACTCTGCAACAAACTCCTAGCTCTATCCAGAGTGTCCTCTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256951.10
3UTR TCA 90 bp CCTCCCTGCCCCGACAGTGATAGAAGCATCCATCAACGCCCATCCTaGCATCAGCATAAAGCACAGGTTGGAGAGATTGTAGATAAAGGC +
Preference number: 1 (lower is better)
Translates to: PPCPDSDRSIHQRPS*HQHKAQVGEIVDKG
Trigger: GCCTTTATCTACAATCTCTCCAACCTGTGCTTTATGCTGATGTCAGGATGGGCGTTGATGGATGCTTCTATCACTGTCGGGGCAGGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256951.10
3UTR CCA 90 bp AGGCAGAGAGGCTATTATAATGCTTCTCACCTCCAGTTCCCCAGATaGAAGACAAGGAGGCCCTGGAACAAAGGAATGGCATTTGGGACA +
Preference number: 1 (lower is better)
Translates to: RQRGYYNASHLQFPR*KTRRPWNKGMAFGT
Trigger: TGTCCCAAATGCCATTCCTTTGTTCCAGGGCCTCCTTGTCTTCCATCTGGGGAACTGGAGGTGAGAAGCATTATAATAGCCTCTCTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256951.10
3UTR TCA 90 bp AAGACAAGGAGGCCCTGGAACAAAGGAATGGCATTTGGGACAAAGTaGTGTTGGCAAGTAAGAAATGCAGCAGTGGTCCAACCCACAGGA +
Preference number: 1 (lower is better)
Translates to: KTRRPWNKGMAFGTK*CWQVRNAAVVQPTG
Trigger: TCCTGTGGGTTGGACCACTGCTGCATTTCTTACTTGCCAACATCACTTTGTCCCAAATGCCATTCCTTTGTTCCAGGGCCTCCTTGTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256951.10
3UTR CCA 90 bp TTGAAAGTGTGGAAGCACCTTTGGAACTGGGTAACGGGTAGAGGTTaGAAGAGTTTGGAGGGCTCAGAAGAAGACAGGAAGATGAAGGAA +
Preference number: 1 (lower is better)
Translates to: LKVWKHLWNWVTGRG*KSLEGSEEDRKMKE
Trigger: TTCCTTCATCTTCCTGTCTTCTTCTGAGCCCTCCAAACTCTTCCAACCTCTACCCGTTACCCAGTTCCAAAGGTGCTTCCACACTTTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256951.10
3UTR CCA 90 bp CGGTATGTTGATAAATTAGAGGTGTCTGGGCTCTCATGTCTGCACTaGTTTGTGTGGCCACGCTGTGATGTAAAACACAGAACCTCATGC +
Preference number: 1 (lower is better)
Translates to: RYVDKLEVSGLSCLH*FVWPRCDVKHRTSC
Trigger: GCATGAGGTTCTGTGTTTTACATCACAGCGTGGCCACACAAACCAGTGCAGACATGAGAGCCCAGACACCTCTAATTTATCAACATACCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544053.5
3UTR GCA 90 bp TCTTTATCCAGTCCTTATTGCTCACAGAAAGATACCAGTCCTTACTaGTCACAGAAAGTAGTGAAGCCTCCCTTCACTCACAGAGCCCAC +
Preference number: 1 (lower is better)
Translates to: SLSSPYCSQKDTSPY*SQKVVKPPFTHRAH
Trigger: GTGGGCTCTGTGAGTGAAGGGAGGCTTCACTACTTTCTGTGAGCAGTAAGGACTGGTATCTTTCTGTGAGCAATAAGGACTGGATAAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256951.10
3UTR GCA 90 bp CAAAGGAATGGCATTTGGGACAAAGTGATGTTGGCAAGTAAGAAATaGAGCAGTGGTCCAACCCACAGGAGATGCCAGACAATTGCTCAT +
Preference number: 1 (lower is better)
Translates to: QRNGIWDKVMLASKK*SSGPTHRRCQTIAH
Trigger: ATGAGCAATTGTCTGGCATCTCCTGTGGGTTGGACCACTGCTGCATTTCTTACTTGCCAACATCACTTTGTCCCAAATGCCATTCCTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256951.10
3UTR TCA 90 bp GGCAGTGGTTTCATCTTTCTGAGAACTCCTACCTTTCTGCCTTCTTaGAGTGTCTTGTACACACGTGCTACTAACAGATATGCACTGCCA +
Preference number: 1 (lower is better)
Translates to: GSGFIFLRTPTFLPS*SVLYTRATNRYALP
Trigger: TGGCAGTGCATATCTGTTAGTAGCACGTGTGTACAAGACACTTCAAGAAGGCAGAAAGGTAGGAGTTCTCAGAAAGATGAAACCACTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544053.5
3UTR CCA 90 bp TCACTCACAGAGCCCACACAGGTATGCCCTGGTTTATGTAATGAATaGGCTGCTACAAATAGGTGTGATGCATGCCTTTGTGAATCACTT +
Preference number: 1 (lower is better)
Translates to: SLTEPTQVCPGLCNE*AATNRCDACLCESL
Trigger: AAGTGATTCACAAAGGCATGCATCACACCTATTTGTAGCAGCCCATTCATTACATAAACCAGGGCATACCTGTGTGGGCTCTGTGAGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256951.10
3UTR GCA 90 bp GTGCTGACACGACACAAGGATATGCAGTCTTTATCCAGTCCTTATTaGTCACAGAAAGATACCAGTCCTTACTGCTCACAGAAAGTAGTG +
Preference number: 1 (lower is better)
Translates to: VLTRHKDMQSLSSPY*SQKDTSPYCSQKVV
Trigger: CACTACTTTCTGTGAGCAGTAAGGACTGGTATCTTTCTGTGAGCAATAAGGACTGGATAAAGACTGCATATCCTTGTGTCGTGTCAGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256951.10
3UTR GCA 90 bp ACTCTGTGCAACTATTTCATCCAAGACCAGAAGGGGCTGGAAGATTaGCTGCTTCACATTAAAACCCTCCTTATTGTATTGGTGCTGACA +
Preference number: 1 (lower is better)
Translates to: TLCNYFIQDQKGLED*LLHIKTLLIVLVLT
Trigger: TGTCAGCACCAATACAATAAGGAGGGTTTTAATGTGAAGCAGGCAATCTTCCAGCCCCTTCTGGTCTTGGATGAAATAGTTGCACAGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256951.10
3UTR TCA 90 bp AAGATTGCCTGCTTCACATTAAAACCCTCCTTATTGTATTGGTGCTaGCACGACACAAGGATATGCAGTCTTTATCCAGTCCTTATTGCT +
Preference number: 1 (lower is better)
Translates to: KIACFTLKPSLLYWC*HDTRICSLYPVLIA
Trigger: AGCAATAAGGACTGGATAAAGACTGCATATCCTTGTGTCGTGTCAGCACCAATACAATAAGGAGGGTTTTAATGTGAAGCAGGCAATCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256951.10
3UTR CCA 90 bp AGAAAGCTAATAAAGAAAAGTAGGCAAGATGTCTCAGATTCTCCCTaGGGTAGATCTTCTCAGGGCGATAAAGAAAACGTCTTCCCAAAA +
Preference number: 1 (lower is better)
Translates to: RKLIKKSRQDVSDSP*GRSSQGDKENVFPK
Trigger: TTTTGGGAAGACGTTTTCTTTATCGCCCTGAGAAGATCTACCCCAGGGAGAATCTGAGACATCTTGCCTACTTTTCTTTATTAGCTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256951.10
3UTR CCA 90 bp GGATTTTCGTATTTTCCTGGGAATGCAGGCACTCTGTTCTTATCATaGCTGAAATACGGTAGGCTTAATACTTCACAATTATATAGCACC +
Preference number: 1 (lower is better)
Translates to: GFSYFPGNAGTLFLS*LKYGRLNTSQLYST
Trigger: GGTGCTATATAATTGTGAAGTATTAAGCCTACCGTATTTCAGCCATGATAAGAACAGAGTGCCTGCATTCCCAGGAAAATACGAAAATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256951.10
3UTR TCA 90 bp TTTCGTATTTTCCTGGGAATGCAGGCACTCTGTTCTTATCATGGCTaGAATACGGTAGGCTTAATACTTCACAATTATATAGCACCTTTC +
Preference number: 1 (lower is better)
Translates to: FRIFLGMQALCSYHG*NTVGLILHNYIAPF
Trigger: GAAAGGTGCTATATAATTGTGAAGTATTAAGCCTACCGTATTTCAGCCATGATAAGAACAGAGTGCCTGCATTCCCAGGAAAATACGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256951.10
3UTR TCA 90 bp GATCCTCCATTTTCTCTAGGTATGAGATTTATTTCCAAGCTAGACTaGAAGCTGGAAGAAGATGGGACACATGTCTGCTTCATTTTCTAT +
Preference number: 1 (lower is better)
Translates to: DPPFSLGMRFISKLD*KLEEDGTHVCFIFY
Trigger: ATAGAAAATGAAGCAGACATGTGTCCCATCTTCTTCCAGCTTTCAGTCTAGCTTGGAAATAAATCTCATACCTAGAGAAAATGGAGGATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256951.10
3UTR GCA 90 bp GTAAACATTGAAGGGAGTTTCTTCCTTTATTCAAGTATGGAACCCTaGTCAATATCCTTTTGGTCTTCATATGCCTTCTTTCAAGGCCTT +
Preference number: 1 (lower is better)
Translates to: VNIEGSFFLYSSMEP*SISFWSSYAFFQGL
Trigger: AAGGCCTTGAAAGAAGGCATATGAAGACCAAAAGGATATTGAGCAGGGTTCCATACTTGAATAAAGGAAGAAACTCCCTTCAATGTTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256951.10
3UTR CCA 90 bp ATACTTCACAATTATATAGCACCTTTCACCCAAGGGCCTGTTGTTTaGTTTTGGTTTATGTGTGTTTTAATCAGCTTCCAGAATTGCCAT +
Preference number: 1 (lower is better)
Translates to: ILHNYIAPFTQGPVV*FWFMCVLISFQNCH
Trigger: ATGGCAATTCTGGAAGCTGATTAAAACACACATAAACCAAAACCAAACAACAGGCCCTTGGGTGAAAGGTGCTATATAATTGTGAAGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256951.10
3UTR GCA 90 bp AGACAAAACTTCCTCAAAAATGTTAGAGGAAGAGTAATAGGATTGTaGTACAATGAGCCATGTCCATCTCTCTCCTGTTGTATACTTAAA +
Preference number: 1 (lower is better)
Translates to: RQNFLKNVRGRVIGL*YNEPCPSLSCCILK
Trigger: TTTAAGTATACAACAGGAGAGAGATGGACATGGCTCATTGTAGCACAATCCTATTACTCTTCCTCTAACATTTTTGAGGAAGTTTTGTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000256951.10
3UTR-3UTR CCA 90 bp CTCAGTGCAGTAGGTCTGTGGACCTCAGTGCATGACCCAGAAGTGGGGCTGGTGTGCAGGGAGGCTCTCTaGACCCCATCAAGGGAGCAT +
Preference number: 2 (lower is better)
Translates to: LSAVGLWTSVHDPEVGLVCREAL*TPSREH
Trigger: ATGCTCCCTTGATGGGGTCCAGAGAGCCTCCCTGCA...CACCAGCCCCACTTCTGGGTCATGCACTGAGGTCCACAGACCTACTGCACTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256951.10
ENST00000431267.2
3UTR-3UTR TCA 90 bp CCCCATTCACCATCCAGGCTTTTGAGGAGAAAGATACCAATCTTAGCAGCAGAGAGGGACAGCCGTGTGTaGGGTCTCGACTGGGCTCTG +
Preference number: 2 (lower is better)
Translates to: PHSPSRLLRRKIPILAAERDSRV*GLDWAL
Trigger: CAGAGCCCAGTCGAGACCTCACACACGGCTGTCCCT...CTCTGCTGCTAAGATTGGTATCTTTCTCCTCAAAAGCCTGGATGGTGAATGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256951.10
3UTR-3UTR TCA 90 bp TGGCTTCCAGGCTTAGCGTATTCAGCACAAAGACAGTATCTGCTCTTGCCAGAATGGTGTTGTGGCAGCTaGTGGGGCCCCAGACAGTGT +
Preference number: 2 (lower is better)
Translates to: WLPGLAYSAQRQYLLLPEWCCGS*WGPRQC
Trigger: ACACTGTCTGGGGCCCCATCAGCTGCCACAACACCA...TTCTGGCAAGAGCAGATACTGTCTTTGTGCTGAATACGCTAAGCCTGGAAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256951.10
ENST00000431267.2
3UTR-3UTR TCA 90 bp GAGTCTGACAAAAGTTCCCTCTGCAGAAGGGATGGAAGGATAGCCTTGGGGGTTGCAAAGACCATGGCATaGGGTCTCCATGAGGGACAG +
Preference number: 2 (lower is better)
Translates to: ESDKSSLCRRDGRIALGVAKTMA*GLHEGQ
Trigger: CTGTCCCTCATGGAGACCTCATGCCATGGTCTTTGC...AACCCCCAAGGCTATCCTTCCATCCCTTCTGCAGAGGGAACTTTTGTCAGACTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000256951.10
3UTR-3UTR CCA 90 bp GAGTCTGACAAAAGTTCCCTCTGCAGAAGGGATGGAAGGATAGCCTTGGGGGTTAGTGCAGTAGGTCTGTaGACCTCAGTGCATGACCCA +
Preference number: 2 (lower is better)
Translates to: ESDKSSLCRRDGRIALGVSAVGL*TSVHDP
Trigger: TGGGTCATGCACTGAGGTCCACAGACCTACTGCACT...AACCCCCAAGGCTATCCTTCCATCCCTTCTGCAGAGGGAACTTTTGTCAGACTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000256951.10
3UTR-3UTR GCA 90 bp TGGTTTATGTGTGTTTTAATCAGCTTCCAGAATTGCCATGCCTCACCTGTGAAGGCCAAGTCTGGTGGCTaGAGGGAGGCTCTCTGGACC +
Preference number: 2 (lower is better)
Translates to: WFMCVLISFQNCHASPVKAKSGG*REALWT
Trigger: GGTCCAGAGAGCCTCCCTGCAGCCACCAGACTTGGC...CTTCACAGGTGAGGCATGGCAATTCTGGAAGCTGATTAAAACACACATAAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256951.10
3UTR-3UTR TCA 90 bp GCAGTCTTTATCCAGTCCTTATTGCTCACAGAAAGATACCAGTCCTTACTGCTCAGGGTCCCCAAGAGGTaGTCACTCCAGGTGGTGTCT +
Preference number: 2 (lower is better)
Translates to: AVFIQSLLLTERYQSLLLRVPKR*SLQVVS
Trigger: AGACACCACCTGGAGTGATCACCTCTTGGGGACCCT...GAGCAGTAAGGACTGGTATCTTTCTGTGAGCAATAAGGACTGGATAAAGACTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256951.10
3UTR-3UTR TCA 90 bp ATGCAGTCTTTATCCAGTCCTTATTGCTCACAGAAAGATACCAGTCCTTACTGCGCCATGCCTCACCTGTaGAGTGGGATAGGCAGGGTC +
Preference number: 2 (lower is better)
Translates to: MQSLSSPYCSQKDTSPYCAMPHL*SGIGRV
Trigger: GACCCTGCCTATCCCACTTCACAGGTGAGGCATGGC...GCAGTAAGGACTGGTATCTTTCTGTGAGCAATAAGGACTGGATAAAGACTGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256951.10
3UTR-3UTR TCA 90 bp GTGGTGATACTGCGTTCCATCACGATTCGCATAATGACTAGTGTAGATGGACACCCTAAACAGGAGTTCTaGTGGATGTCCCCTGGGCCA +
Preference number: 2 (lower is better)
Translates to: VVILRSITIRIMTSVDGHPKQEF*WMSPGP
Trigger: TGGCCCAGGGGACATCCATCAGAACTCCTGTTTAGG...GTGTCCATCTACACTAGTCATTATGCGAATCGTGATGGAACGCAGTATCACCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544053.5
3UTR-3UTR GCA 90 bp ATGTGTGTTTTAATCAGCTTCCAGAATTGCCATGCCTCACCTGTGAAGTGGGATGTCTGTGGACCTCAGTaGATGACCCAGAAGTGGGGC +
Preference number: 2 (lower is better)
Translates to: MCVLISFQNCHASPVKWDVCGPQ*MTQKWG
Trigger: GCCCCACTTCTGGGTCATGCACTGAGGTCCACAGAC...ATCCCACTTCACAGGTGAGGCATGGCAATTCTGGAAGCTGATTAAAACACACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256951.10
3UTR-3UTR CCA 90 bp TGGCTTCCAGGCTTAGCGTATTCAGCACAAAGACAGTATCTGCTCTTGCCAGAAAGTGCAGTAGGTCTGTaGACCTCAGTGCATGACCCA +
Preference number: 2 (lower is better)
Translates to: WLPGLAYSAQRQYLLLPESAVGL*TSVHDP
Trigger: TGGGTCATGCACTGAGGTCCACAGACCTACTGCACT...TTCTGGCAAGAGCAGATACTGTCTTTGTGCTGAATACGCTAAGCCTGGAAGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256951.10
ENST00000431267.2
3UTR-3UTR CCA 90 bp CAGCTCTCTGCTGGCCCACCCCTTGCAGACTTTGGGCTTGCCTGCCTTCAAAATACTCTGTTCTTATCATaGCTGAAATACGGTAGGCTT +
Preference number: 2 (lower is better)
Translates to: QLSAGPPLADFGLACLQNTLFLS*LKYGRL
Trigger: AAGCCTACCGTATTTCAGCCATGATAAGAACAGAGT...ATTTTGAAGGCAGGCAAGCCCAAAGTCTGCAAGGGGTGGGCCAGCAGAGAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256951.10
3UTR CAA 90 bp CCAATCTTAGCAGCAGAGGACACTCTGGATAGAGCTAGGAGTTTGTaGCAGAGTCTGACAAAAGTTCCCTCTGCAGAAGGGATGGAAGGA +
Preference number: 2 (lower is better)
Translates to: PILAAEDTLDRARSL*QSLTKVPSAEGMEG
Trigger: TCCTTCCATCCCTTCTGCAGAGGGAACTTTTGTCAGACTCTGCAACAAACTCCTAGCTCTATCCAGAGTGTCCTCTGCTGCTAAGATTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256951.10
3UTR CAA 90 bp TGGAAGCACCTTTGGAACTGGGTAACGGGTAGAGGTTGGAAGAGTTaGGAGGGCTCAGAAGAAGACAGGAAGATGAAGGAAAGTTTGGAG +
Preference number: 2 (lower is better)
Translates to: WKHLWNWVTGRGWKS*EGSEEDRKMKESLE
Trigger: CTCCAAACTTTCCTTCATCTTCCTGTCTTCTTCTGAGCCCTCCAAACTCTTCCAACCTCTACCCGTTACCCAGTTCCAAAGGTGCTTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256951.10
3UTR-3UTR CCA 90 bp CTGCTTCACATTAAAACCCTCCTTATTGTATTGGTGCTGACACGACACAAGGATTGCATGACCCAGAAGTaGGGCTGGTGTTGTGGCAGC +
Preference number: 2 (lower is better)
Translates to: LLHIKTLLIVLVLTRHKDCMTQK*GWCCGS
Trigger: GCTGCCACAACACCAGCCCCACTTCTGGGTCATGCA...ATCCTTGTGTCGTGTCAGCACCAATACAATAAGGAGGGTTTTAATGTGAAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256951.10
3UTR-3UTR CCA 90 bp GCAGTCTTTATCCAGTCCTTATTGCTCACAGAAAGATACCAGTCCTTACTGCTCTCCAAAGAGGGACAATaGCTCACAGGCCAAAGCCCC +
Preference number: 2 (lower is better)
Translates to: AVFIQSLLLTERYQSLLLSKEGQ*LTGQSP
Trigger: GGGGCTTTGGCCTGTGAGCCATTGTCCCTCTTTGGA...GAGCAGTAAGGACTGGTATCTTTCTGTGAGCAATAAGGACTGGATAAAGACTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256951.10
3UTR-3UTR TCA 90 bp GCCGTGGTGATACTGCGTTCCATCACGATTCGCATAATGACTAGTGTAGATGGACAGGAGCACTGGTTTTaGACAATGAAGCAGATGAGG +
Preference number: 2 (lower is better)
Translates to: AVVILRSITIRIMTSVDGQEHWF*TMKQMR
Trigger: CCTCATCTGCTTCATTGTTCAAAACCAGTGCTCCTG...TCCATCTACACTAGTCATTATGCGAATCGTGATGGAACGCAGTATCACCACGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544053.5
3UTR-3UTR GCA 90 bp GGCACTTCAGACTGGAATGTGATGTTTTGCTTTGGGTCAGAAGGGCAGGATGGCCACAAAGACAGTATCTaGTCTTGCCAGAACTTGTAC +
Preference number: 2 (lower is better)
Translates to: GTSDWNVMFCFGSEGQDGHKDSI*SCQNLY
Trigger: GTACAAGTTCTGGCAAGAGCAGATACTGTCTTTGTG...GCCATCCTGCCCTTCTGACCCAAAGCAAAACATCACATTCCAGTCTGAAGTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256951.10
ENST00000431267.2
3UTR-3UTR CCA 90 bp AAATTAGAGGTGTCTGGGCTCTCATGTCTGCACTGGTTTGTGTGGCCACGCTGTTGTGCATTGTGGCAGTaGTTTCATCTTTCTGAGAAC +
Preference number: 2 (lower is better)
Translates to: KLEVSGLSCLHWFVWPRCCALWQ*FHLSEN
Trigger: GTTCTCAGAAAGATGAAACCACTGCCACAATGCACA...ACAGCGTGGCCACACAAACCAGTGCAGACATGAGAGCCCAGACACCTCTAATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544053.5
3UTR CAA 90 bp ATACCAATCTTAGCAGCAGAGGACACTCTGGATAGAGCTAGGAGTTaGTTGCAGAGTCTGACAAAAGTTCCCTCTGCAGAAGGGATGGAA +
Preference number: 2 (lower is better)
Translates to: IPILAAEDTLDRARS*LQSLTKVPSAEGME
Trigger: TTCCATCCCTTCTGCAGAGGGAACTTTTGTCAGACTCTGCAACAAACTCCTAGCTCTATCCAGAGTGTCCTCTGCTGCTAAGATTGGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256951.10
3UTR-3UTR GCA 90 bp CCCCATTCACCATCCAGGCTTTTGAGGAGAAAGATACCAATCTTAGCAGCAGAGGAGCCCACACAGGTATaGCCTGGTTTATGTAATGAA +
Preference number: 2 (lower is better)
Translates to: PHSPSRLLRRKIPILAAEEPTQV*PGLCNE
Trigger: TTCATTACATAAACCAGGGCATACCTGTGTGGGCTC...CTCTGCTGCTAAGATTGGTATCTTTCTCCTCAAAAGCCTGGATGGTGAATGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256951.10
3UTR-3UTR GCA 90 bp GTGGTGATACTGCGTTCCATCACGATTCGCATAATGACTAGTGTAGATGGACACCTAACAGATATGCACTaGCACTTGGTAGCTACCCAG +
Preference number: 2 (lower is better)
Translates to: VVILRSITIRIMTSVDGHLTDMH*HLVATQ
Trigger: CTGGGTAGCTACCAAGTGGCAGTGCATATCTGTTAG...GTGTCCATCTACACTAGTCATTATGCGAATCGTGATGGAACGCAGTATCACCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544053.5
3UTR CAA 90 bp GGGCTGGAAGATTGCCTGCTTCACATTAAAACCCTCCTTATTGTATaGGTGCTGACACGACACAAGGATATGCAGTCTTTATCCAGTCCT +
Preference number: 2 (lower is better)
Translates to: GLEDCLLHIKTLLIV*VLTRHKDMQSLSSP
Trigger: AGGACTGGATAAAGACTGCATATCCTTGTGTCGTGTCAGCACCAATACAATAAGGAGGGTTTTAATGTGAAGCAGGCAATCTTCCAGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256951.10
3UTR CAA 90 bp GGTGCTGACACGACACAAGGATATGCAGTCTTTATCCAGTCCTTATaGCTCACAGAAAGATACCAGTCCTTACTGCTCACAGAAAGTAGT +
Preference number: 2 (lower is better)
Translates to: GADTTQGYAVFIQSL*LTERYQSLLLTESS
Trigger: ACTACTTTCTGTGAGCAGTAAGGACTGGTATCTTTCTGTGAGCAATAAGGACTGGATAAAGACTGCATATCCTTGTGTCGTGTCAGCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256951.10
3UTR-3UTR GCA 90 bp CCCCATTCACCATCCAGGCTTTTGAGGAGAAAGATACCAATCTTAGCAGCAGAGAGAGTAATAGGATTGTaGTACAATGAGCCATGTCCA +
Preference number: 2 (lower is better)
Translates to: PHSPSRLLRRKIPILAAERVIGL*YNEPCP
Trigger: TGGACATGGCTCATTGTAGCACAATCCTATTACTCT...CTCTGCTGCTAAGATTGGTATCTTTCTCCTCAAAAGCCTGGATGGTGAATGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256951.10
3UTR-3UTR GCA 90 bp GCAGTCTTTATCCAGTCCTTATTGCTCACAGAAAGATACCAGTCCTTACTGCTCTCTTCCCACAGTTTTTaGTGGCCAATCTCTCTAACC +
Preference number: 2 (lower is better)
Translates to: AVFIQSLLLTERYQSLLLSSHSF*WPISLT
Trigger: GGTTAGAGAGATTGGCCAGCAAAAACTGTGGGAAGA...GAGCAGTAAGGACTGGTATCTTTCTGTGAGCAATAAGGACTGGATAAAGACTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256951.10
3UTR-3UTR GCA 90 bp AAGCTACTCAGGGATGCAAAAGAGCATGTCCTTCCACCAAACCGAGTATATTGGGAACTCCTACCTTTCTaGCTTCTTGAAGTGTCTTGT +
Preference number: 2 (lower is better)
Translates to: KLLRDAKEHVLPPNRVYWELLPF*LLEVSC
Trigger: ACAAGACACTTCAAGAAGGCAGAAAGGTAGGAGTTC...CCAATATACTCGGTTTGGTGGAAGGACATGCTCTTTTGCATCCCTGAGTAGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544053.5
3UTR-3UTR TCA 90 bp TGGTTTATGTGTGTTTTAATCAGCTTCCAGAATTGCCATGCCTCACCTGTGAAGCTTCAGACTGGAATGTaGTGTTTTGCTTTGGGTCAG +
Preference number: 2 (lower is better)
Translates to: WFMCVLISFQNCHASPVKLQTGM*CFALGQ
Trigger: CTGACCCAAAGCAAAACATCACATTCCAGTCTGAAG...CTTCACAGGTGAGGCATGGCAATTCTGGAAGCTGATTAAAACACACATAAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256951.10
3UTR-3UTR TCA 90 bp ATGCAGTCTTTATCCAGTCCTTATTGCTCACAGAAAGATACCAGTCCTTACTGCCCAGGTTTTCCATTGTaGAAAGGTCTCCTTCTTGGT +
Preference number: 2 (lower is better)
Translates to: MQSLSSPYCSQKDTSPYCPGFPL*KGLLLG
Trigger: ACCAAGAAGGAGACCTTTTCACAATGGAAAACCTGG...GCAGTAAGGACTGGTATCTTTCTGTGAGCAATAAGGACTGGATAAAGACTGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256951.10
3UTR-3UTR GCA 90 bp ACACAAGGATATGCAGTCTTTATCCAGTCCTTATTGCTCACAGAAAGATACCAGAAACTCCAGAAGAGCTaGCTTGGCTTTCAGCAAGAG +
Preference number: 2 (lower is better)
Translates to: TQGYAVFIQSLLLTERYQKLQKS*LGFQQE
Trigger: CTCTTGCTGAAAGCCAAGGCAGCTCTTCTGGAGTTT...CTGGTATCTTTCTGTGAGCAATAAGGACTGGATAAAGACTGCATATCCTTGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256951.10
3UTR-3UTR CCA 90 bp CTGCTTCACATTAAAACCCTCCTTATTGTATTGGTGCTGACACGACACAAGGATAACATAACCCTAACATaGCACTGTTGCAAGACTGCC +
Preference number: 2 (lower is better)
Translates to: LLHIKTLLIVLVLTRHKDNITLT*HCCKTA
Trigger: GGCAGTCTTGCAACAGTGCCATGTTAGGGTTATGTT...ATCCTTGTGTCGTGTCAGCACCAATACAATAAGGAGGGTTTTAATGTGAAGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256951.10
3UTR-3UTR CCA 90 bp GCCGTGGTGATACTGCGTTCCATCACGATTCGCATAATGACTAGTGTAGATGGACCAAACCGAGTATATTaGGAAAGAACAACAATTAAG +
Preference number: 2 (lower is better)
Translates to: AVVILRSITIRIMTSVDGPNRVY*ERTTIK
Trigger: CTTAATTGTTGTTCTTTCCCAATATACTCGGTTTGG...TCCATCTACACTAGTCATTATGCGAATCGTGATGGAACGCAGTATCACCACGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544053.5
3UTR-3UTR CCA 90 bp ATGGTTTTAACCAAAATGCTGACAGTGATGTGGACGATTAAGTCCACACTGAGGAGACAGAATCTGAGATaGCTTAAAATAGCTGCTCCA +
Preference number: 2 (lower is better)
Translates to: MVLTKMLTVMWTIKSTLRRQNLR*LKIAAP
Trigger: TGGAGCAGCTATTTTAAGCCATCTCAGATTCTGTCT...CCTCAGTGTGGACTTAATCGTCCACATCACTGTCAGCATTTTGGTTAAAACCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000256951.10
3UTR CAA 90 bp TGTGATAATGAAATCATAATGACAAAGTTCATCTTCCCACAGTTTTaGCTGGCCAATCTCTCTAACCTCAGCCTAGGTAATTTGGTGGCT +
Preference number: 2 (lower is better)
Translates to: CDNEIIMTKFIFPQF*LANLSNLSLGNLVA
Trigger: AGCCACCAAATTACCTAGGCTGAGGTTAGAGAGATTGGCCAGCAAAAACTGTGGGAAGATGAACTTTGTCATTATGATTTCATTATCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256951.10
3UTR-3UTR GCA 90 bp ATGGTTTTAACCAAAATGCTGACAGTGATGTGGACGATTAAGTCCACACTGAGGAATAGGTGTGATGCATaGCTTTGTGAATCACTTTAT +
Preference number: 2 (lower is better)
Translates to: MVLTKMLTVMWTIKSTLRNRCDA*LCESLY
Trigger: ATAAAGTGATTCACAAAGGCATGCATCACACCTATT...CCTCAGTGTGGACTTAATCGTCCACATCACTGTCAGCATTTTGGTTAAAACCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256951.10
3UTR CAA 90 bp ATTAGACAAAACTTCCTCAAAAATGTTAGAGGAAGAGTAATAGGATaGTGCTACAATGAGCCATGTCCATCTCTCTCCTGTTGTATACTT +
Preference number: 2 (lower is better)
Translates to: IRQNFLKNVRGRVIG*CYNEPCPSLSCCIL
Trigger: AAGTATACAACAGGAGAGAGATGGACATGGCTCATTGTAGCACAATCCTATTACTCTTCCTCTAACATTTTTGAGGAAGTTTTGTCTAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000256951.10
3UTR TCA 72 bp CCATGGCATGAGGTCTCCATGAGGGACAGCCGTGTGTaGGGTCTCGACTGGGCTCTGACCATCCCCCAGGTT +
Preference number: 3 (lower is better)
Translates to: PWHEVSMRDSRV*GLDWALTIPQV
Trigger: AACCTGGGGGATGGTCAGAGCCCAGTCGAGACCTCACACACGGCTGTCCCTCATGGAGACCTCATGCCATGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256951.10
3UTR GCA 72 bp GGCAACTTTCAGACCCGCACTGTAGCACCAGCTCTCTaGTGGCCCACCCCTTGCAGACTTTGGGCTTGCCTG +
Preference number: 3 (lower is better)
Translates to: GNFQTRTVAPAL*WPTPCRLWACL
Trigger: CAGGCAAGCCCAAAGTCTGCAAGGGGTGGGCCAGCAGAGAGCTGGTGCTACAGTGCGGGTCTGAAAGTTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256951.10
3UTR CCA 72 bp AACTTTCAGACCCGCACTGTAGCACCAGCTCTCTGCTaGCCCACCCCTTGCAGACTTTGGGCTTGCCTGCCT +
Preference number: 3 (lower is better)
Translates to: NFQTRTVAPALC*PTPCRLWACLP
Trigger: AGGCAGGCAAGCCCAAAGTCTGCAAGGGGTGGGCCAGCAGAGAGCTGGTGCTACAGTGCGGGTCTGAAAGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256951.10
3UTR-3UTR CAA 90 bp GGTCAGAAGGGCAGGATGGCTTCCAGGCTTAGCGTATTCAGCACAAAGACAGTAGAAGTGGGGCTGGTGTaGTGGCAGCTGATGGGGCCC +
Preference number: 3 (lower is better)
Translates to: GQKGRMASRLSVFSTKTVEVGLV*WQLMGP
Trigger: GGGCCCCATCAGCTGCCACAACACCAGCCCCACTTC...TACTGTCTTTGTGCTGAATACGCTAAGCCTGGAAGCCATCCTGCCCTTCTGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256951.10
ENST00000431267.2
3UTR TCA 72 bp AAGAGGCCTAGCAAAGACCATGGCATGAGGTCTCCATaGGGGACAGCCGTGTGTGAGGTCTCGACTGGGCTC +
Preference number: 3 (lower is better)
Translates to: KRPSKDHGMRSP*GTAVCEVSTGL
Trigger: GAGCCCAGTCGAGACCTCACACACGGCTGTCCCTCATGGAGACCTCATGCCATGGTCTTTGCTAGGCCTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256951.10
3UTR GCA 72 bp CGCACTGTAGCACCAGCTCTCTGCTGGCCCACCCCTTaGAGACTTTGGGCTTGCCTGCCTTCAAAATCATGT +
Preference number: 3 (lower is better)
Translates to: RTVAPALCWPTP*RLWACLPSKSC
Trigger: ACATGATTTTGAAGGCAGGCAAGCCCAAAGTCTGCAAGGGGTGGGCCAGCAGAGAGCTGGTGCTACAGTGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256951.10
3UTR GCA 72 bp GTGTGGCCACGCTGTGATGTAAAACACAGAACCTCATaGCTACCACCCAGCTGTCCTGTCTGGCCCTTGTGG +
Preference number: 3 (lower is better)
Translates to: VWPRCDVKHRTS*LPPSCPVWPLW
Trigger: CCACAAGGGCCAGACAGGACAGCTGGGTGGTAGGCATGAGGTTCTGTGTTTTACATCACAGCGTGGCCACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544053.5
3UTR TCA 72 bp TGGCTTTCAGCAAGAGGCCTAGCAAAGACCATGGCATaGGGTCTCCATGAGGGACAGCCGTGTGTGAGGTCT +
Preference number: 3 (lower is better)
Translates to: WLSARGLAKTMA*GLHEGQPCVRS
Trigger: AGACCTCACACACGGCTGTCCCTCATGGAGACCTCATGCCATGGTCTTTGCTAGGCCTCTTGCTGAAAGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256951.10
3UTR CCA 72 bp ATCAGCTTCCAGAATTGCCATGCCTCACCTGTGAAGTaGGATAGGCAGGGTCCCCAAGAGGTGATCACTCCA +
Preference number: 3 (lower is better)
Translates to: ISFQNCHASPVK*DRQGPQEVITP
Trigger: TGGAGTGATCACCTCTTGGGGACCCTGCCTATCCCACTTCACAGGTGAGGCATGGCAATTCTGGAAGCTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256951.10
3UTR-3UTR CAA 90 bp GAACCTCATGCCTACCACCCAGCTGTCCTGTCTGGCCCTTGTGGGTCTAGGAAACCAGGAGCACTGGTTTaGAACAATGAAGCAGATGAG +
Preference number: 3 (lower is better)
Translates to: EPHAYHPAVLSGPCGSRKPGALV*NNEADE
Trigger: CTCATCTGCTTCATTGTTCAAAACCAGTGCTCCTGG...TTTCCTAGACCCACAAGGGCCAGACAGGACAGCTGGGTGGTAGGCATGAGGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544053.5
3UTR-3UTR CAA 90 bp CAGAACCTCATGCCTACCACCCAGCTGTCCTGTCTGGCCCTTGTGGGTCTAGGATACCTTTCTGCCTTCTaGAAGTGTCTTGTACACACG +
Preference number: 3 (lower is better)
Translates to: QNLMPTTQLSCLALVGLGYLSAF*KCLVHT
Trigger: CGTGTGTACAAGACACTTCAAGAAGGCAGAAAGGTA...TCCTAGACCCACAAGGGCCAGACAGGACAGCTGGGTGGTAGGCATGAGGTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544053.5
3UTR CCA 72 bp TGGAAGCACCTTTGGAACTGGGTAACGGGTAGAGGTTaGAAGAGTTTGGAGGGCTCAGAAGAAGACAGGAAG +
Preference number: 3 (lower is better)
Translates to: WKHLWNWVTGRG*KSLEGSEEDRK
Trigger: CTTCCTGTCTTCTTCTGAGCCCTCCAAACTCTTCCAACCTCTACCCGTTACCCAGTTCCAAAGGTGCTTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256951.10
3UTR CCA 72 bp CCTGAAAGCCGGTGGGGTTTTACACAGGGACTGCGATaGCTAAATCCAAGGCAGAGTGGGATCTTTATCTAT +
Preference number: 3 (lower is better)
Translates to: PESRWGFTQGLR*LNPRQSGIFIY
Trigger: ATAGATAAAGATCCCACTCTGCCTTGGATTTAGCCATCGCAGTCCCTGTGTAAAACCCCACCGGCTTTCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256951.10
3UTR CCA 72 bp CAAAGCCACGTAAGACTCCAAAACCCCGCCTTCCCTTaGGCTCCACACAATCAGCATACATCTTTCCTTATC +
Preference number: 3 (lower is better)
Translates to: QSHVRLQNPAFP*APHNQHTSFLI
Trigger: GATAAGGAAAGATGTATGCTGATTGTGTGGAGCCCAAGGGAAGGCGGGGTTTTGGAGTCTTACGTGGCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256951.10
3UTR TCA 72 bp CCCGACAGTGATAGAAGCATCCATCAACGCCCATCCTaGCATCAGCATAAAGCACAGGTTGGAGAGATTGTA +
Preference number: 3 (lower is better)
Translates to: PDSDRSIHQRPS*HQHKAQVGEIV
Trigger: TACAATCTCTCCAACCTGTGCTTTATGCTGATGTCAGGATGGGCGTTGATGGATGCTTCTATCACTGTCGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256951.10
3UTR TCA 72 bp AATGAATTCTGCTTGTTTGTCCCTAAACAGGAGTTCTaGTGGATGTCCCCTGGGCCAAGCTCGACGGTATGT +
Preference number: 3 (lower is better)
Translates to: NEFCLFVPKQEF*WMSPGPSSTVC
Trigger: ACATACCGTCGAGCTTGGCCCAGGGGACATCCATCAGAACTCCTGTTTAGGGACAAACAAGCAGAATTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544053.5
3UTR-3UTR CAA 90 bp TCCCTCTGCAGAAGGGATGGAAGGATAGCCTTGGGGGTTGATTTAGGACTGGGTACTTTTACCACCGAATaGTTCACTAGTGACTTTAGA +
Preference number: 3 (lower is better)
Translates to: SLCRRDGRIALGVDLGLGTFTTE*FTSDFR
Trigger: TCTAAAGTCACTAGTGAACAATTCGGTGGTAAAAGT...ACCCAGTCCTAAATCAACCCCCAAGGCTATCCTTCCATCCCTTCTGCAGAGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000256951.10
3UTR CCA 72 bp GAGCCCACACAGGTATGCCCTGGTTTATGTAATGAATaGGCTGCTACAAATAGGTGTGATGCATGCCTTTGT +
Preference number: 3 (lower is better)
Translates to: EPTQVCPGLCNE*AATNRCDACLC
Trigger: ACAAAGGCATGCATCACACCTATTTGTAGCAGCCCATTCATTACATAAACCAGGGCATACCTGTGTGGGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256951.10
3UTR CCA 72 bp CTGACAGTGATGTGGACGATTAAGTCCACACTGAGGTaGTCTCAGAAGGAGATGAGGAACTTATTGGGAACT +
Preference number: 3 (lower is better)
Translates to: LTVMWTIKSTLR*SQKEMRNLLGT
Trigger: AGTTCCCAATAAGTTCCTCATCTCCTTCTGAGACCACCTCAGTGTGGACTTAATCGTCCACATCACTGTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256951.10
3UTR CCA 72 bp GATAAATTAGAGGTGTCTGGGCTCTCATGTCTGCACTaGTTTGTGTGGCCACGCTGTGATGTAAAACACAGA +
Preference number: 3 (lower is better)
Translates to: DKLEVSGLSCLH*FVWPRCDVKHR
Trigger: TCTGTGTTTTACATCACAGCGTGGCCACACAAACCAGTGCAGACATGAGAGCCCAGACACCTCTAATTTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544053.5
3UTR GCA 72 bp AGTCCTTATTGCTCACAGAAAGATACCAGTCCTTACTaGTCACAGAAAGTAGTGAAGCCTCCCTTCACTCAC +
Preference number: 3 (lower is better)
Translates to: SPYCSQKDTSPY*SQKVVKPPFTH
Trigger: GTGAGTGAAGGGAGGCTTCACTACTTTCTGTGAGCAGTAAGGACTGGTATCTTTCTGTGAGCAATAAGGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256951.10
3UTR-3UTR CAA 90 bp ATGGTTTTAACCAAAATGCTGACAGTGATGTGGACGATTAAGTCCACACTGAGGCTGGAATGTGATGTTTaGCTTTGGGTCAGAAGGGCA +
Preference number: 3 (lower is better)
Translates to: MVLTKMLTVMWTIKSTLRLECDV*LWVRRA
Trigger: TGCCCTTCTGACCCAAAGCAAAACATCACATTCCAG...CCTCAGTGTGGACTTAATCGTCCACATCACTGTCAGCATTTTGGTTAAAACCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256951.10
3UTR GCA 72 bp TTTTGGTTTATGTGTGTTTTAATCAGCTTCCAGAATTaGCATGCCTCACCTGTGAAGTGGGATAGGCAGGGT +
Preference number: 3 (lower is better)
Translates to: FWFMCVLISFQN*HASPVKWDRQG
Trigger: ACCCTGCCTATCCCACTTCACAGGTGAGGCATGGCAATTCTGGAAGCTGATTAAAACACACATAAACCAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256951.10
3UTR GCA 72 bp CGACACAAGGATATGCAGTCTTTATCCAGTCCTTATTaGTCACAGAAAGATACCAGTCCTTACTGCTCACAG +
Preference number: 3 (lower is better)
Translates to: RHKDMQSLSSPY*SQKDTSPYCSQ
Trigger: CTGTGAGCAGTAAGGACTGGTATCTTTCTGTGAGCAATAAGGACTGGATAAAGACTGCATATCCTTGTGTCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256951.10
3UTR GCA 72 bp TCAGCCTCCATTGTGTATTTTTGGTGCAATACTCTGTaGAACTATTTCATCCAAGACCAGAAGGGGCTGGAA +
Preference number: 3 (lower is better)
Translates to: SASIVYFWCNTL*NYFIQDQKGLE
Trigger: TTCCAGCCCCTTCTGGTCTTGGATGAAATAGTTGCACAGAGTATTGCACCAAAAATACACAATGGAGGCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000256951.10
3UTR CCA 72 bp ATAAAGAAAAGTAGGCAAGATGTCTCAGATTCTCCCTaGGGTAGATCTTCTCAGGGCGATAAAGAAAACGTC +
Preference number: 3 (lower is better)
Translates to: IKKSRQDVSDSP*GRSSQGDKENV
Trigger: GACGTTTTCTTTATCGCCCTGAGAAGATCTACCCCAGGGAGAATCTGAGACATCTTGCCTACTTTTCTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256951.10
3UTR-3UTR CAA 90 bp TGGTTTATGTGTGTTTTAATCAGCTTCCAGAATTGCCATGCCTCACCTGTGAAGTGCTCTTGCCAGAACTaGTACCGCTATTTTAACTCA +
Preference number: 3 (lower is better)
Translates to: WFMCVLISFQNCHASPVKCSCQN*YRYFNS
Trigger: TGAGTTAAAATAGCGGTACAAGTTCTGGCAAGAGCA...CTTCACAGGTGAGGCATGGCAATTCTGGAAGCTGATTAAAACACACATAAACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256951.10
3UTR TCA 72 bp TGCTTCACATTAAAACCCTCCTTATTGTATTGGTGCTaGCACGACACAAGGATATGCAGTCTTTATCCAGTC +
Preference number: 3 (lower is better)
Translates to: CFTLKPSLLYWC*HDTRICSLYPV
Trigger: GACTGGATAAAGACTGCATATCCTTGTGTCGTGTCAGCACCAATACAATAAGGAGGGTTTTAATGTGAAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256951.10
3UTR-3UTR CAA 90 bp ACACAAGGATATGCAGTCTTTATCCAGTCCTTATTGCTCACAGAAAGATACCAGGGAAGAGTAATAGGATaGTGCTACAATGAGCCATGT +
Preference number: 3 (lower is better)
Translates to: TQGYAVFIQSLLLTERYQGRVIG*CYNEPC
Trigger: ACATGGCTCATTGTAGCACAATCCTATTACTCTTCC...CTGGTATCTTTCTGTGAGCAATAAGGACTGGATAAAGACTGCATATCCTTGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256951.10
3UTR-3UTR CAA 90 bp ACTTTTCAGCCTCCATTGTGTATTTTTGGTGCAATACTCTGTGCAACTATTTCAACCCTCCTTATTGTATaGGTGCTGACACGACACAAG +
Preference number: 3 (lower is better)
Translates to: TFQPPLCIFGAILCATISTLLIV*VLTRHK
Trigger: CTTGTGTCGTGTCAGCACCAATACAATAAGGAGGGT...TGAAATAGTTGCACAGAGTATTGCACCAAAAATACACAATGGAGGCTGAAAAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000256951.10
3UTR TCA 72 bp TTCATCTTTCTGAGAACTCCTACCTTTCTGCCTTCTTaGAGTGTCTTGTACACACGTGCTACTAACAGATAT +
Preference number: 3 (lower is better)
Translates to: FIFLRTPTFLPS*SVLYTRATNRY
Trigger: ATATCTGTTAGTAGCACGTGTGTACAAGACACTTCAAGAAGGCAGAAAGGTAGGAGTTCTCAGAAAGATGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544053.5
3UTR TCA 72 bp AAATCGTGTCTACCTCCAAATGATACATCTTTAAAGTaGGTCACCCCTCCTCACAATCTACTCCAAAATTTC +
Preference number: 3 (lower is better)
Translates to: KSCLPPNDTSLK*VTPPHNLLQNF
Trigger: GAAATTTTGGAGTAGATTGTGAGGAGGGGTGACTCACTTTAAAGATGTATCATTTGGAGGTAGACACGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256951.10
3UTR GCA 72 bp GAAGGGAGTTTCTTCCTTTATTCAAGTATGGAACCCTaGTCAATATCCTTTTGGTCTTCATATGCCTTCTTT +
Preference number: 3 (lower is better)
Translates to: EGSFFLYSSMEP*SISFWSSYAFF
Trigger: AAAGAAGGCATATGAAGACCAAAAGGATATTGAGCAGGGTTCCATACTTGAATAAAGGAAGAAACTCCCTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256951.10
3UTR CCA 72 bp TATTTTCCTGGGAATGCAGGCACTCTGTTCTTATCATaGCTGAAATACGGTAGGCTTAATACTTCACAATTA +
Preference number: 3 (lower is better)
Translates to: YFPGNAGTLFLS*LKYGRLNTSQL
Trigger: TAATTGTGAAGTATTAAGCCTACCGTATTTCAGCCATGATAAGAACAGAGTGCCTGCATTCCCAGGAAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR CCA 90 bp GAACCTCATGCCTACCACCCAGCTGTCCTGTCTGGCCCTTGTGGGTCTAGGAAACAGAGGCGCTCTGAGTaGCAGGTGCTGGCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: EPHAYHPAVLSGPCGSRKQRRSE*QVLAAA
Trigger: GGCTGCTGCCAGCACCTGCCACTCAGAGCGCCTCTG...TTTCCTAGACCCACAAGGGCCAGACAGGACAGCTGGGTGGTAGGCATGAGGTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544053.5
CDS-3UTR TCA 90 bp GGCCCCAGACAGTGTGTGTCACTAAGAACAGCTGGAGGCCAAGTCTGGTGGCTGGTGGACCTCAGTGCATaGCCCAGAAGTGGGGCTGGT +
Preference number: 4 (lower is better)
Translates to: GPRQCVSLRTAGGQVWWLVDLSA*PRSGAG
Trigger: ACCAGCCCCACTTCTGGGTCATGCACTGAGGTCCAC...CAGCCACCAGACTTGGCCTCCAGCTGTTCTTAGTGACACACACTGTCTGGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256951.10
ENST00000431267.2
CDS-3UTR TCA 90 bp CTCAGTGCAGTAGGTCTGTGGACCTCAGTGCATGACCCAGAAGTGGGGCTGGTGGTCTCGACTGGGCTCTaGCCATCCCCCAGGTTTTCC +
Preference number: 4 (lower is better)
Translates to: LSAVGLWTSVHDPEVGLVVSTGL*PSPRFS
Trigger: GGAAAACCTGGGGGATGGTCAGAGCCCAGTCGAGAC...CACCAGCCCCACTTCTGGGTCATGCACTGAGGTCCACAGACCTACTGCACTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR TCA 90 bp TGGACCTCAGTGCATGACCCAGAAGTGGGGCTGGTGTTGTGGCAGCTGATGGGGTGTCTTGAGGGCATCTaGAGGGTCCCAGCGACAGAG +
Preference number: 4 (lower is better)
Translates to: WTSVHDPEVGLVLWQLMGCLEGI*RVPATE
Trigger: CTCTGTCGCTGGGACCCTTCAGATGCCCTCAAGACA...CCCCATCAGCTGCCACAACACCAGCCCCACTTCTGGGTCATGCACTGAGGTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431267.2
CDS-3UTR CCA 90 bp GGCCCCAGACAGTGTGTGTCACTAAGAACAGCTGGAGGCCAAGTCTGGTGGCTGTGCTGGCAGCAGCCCTaGTCCGCTCTTCTGGAAGTA +
Preference number: 4 (lower is better)
Translates to: GPRQCVSLRTAGGQVWWLCWQQP*SALLEV
Trigger: TACTTCCAGAAGAGCGGACCAGGGCTGCTGCCAGCA...CAGCCACCAGACTTGGCCTCCAGCTGTTCTTAGTGACACACACTGTCTGGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256951.10
ENST00000431267.2
CDS-3UTR CCA 90 bp CCCTCCCCTATCTCGGTTTTTCCTGTACAGCAACCTCCACTTCCCTCCCAGATTCAGAGGCGCTCTGAGTaGCAGGTGCTGGCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: PSPISVFPVQQPPLPSQIQRRSE*QVLAAA
Trigger: GGCTGCTGCCAGCACCTGCCACTCAGAGCGCCTCTG...AATCTGGGAGGGAAGTGGAGGTTGCTGTACAGGAAAAACCGAGATAGGGGAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256951.10
ENST00000396301.7
ENST00000431267.2
ENST00000544053.5
CDS-3UTR CCA 90 bp CCTCCCCTATCTCGGTTTTTCCTGTACAGCAACCTCCACTTCCCTCCCAGATTCCAGAGGCGCTCTGAGTaGCAGGTGCTGGCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: PPLSRFFLYSNLHFPPRFQRRSE*QVLAAA
Trigger: GGCTGCTGCCAGCACCTGCCACTCAGAGCGCCTCTG...GAATCTGGGAGGGAAGTGGAGGTTGCTGTACAGGAAAAACCGAGATAGGGGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256951.10
ENST00000396301.7
ENST00000431267.2
ENST00000544053.5
CDS-3UTR GCA 90 bp CCTCCCCTATCTCGGTTTTTCCTGTACAGCAACCTCCACTTCCCTCCCAGATTCGCCAAGTCTGGTGGCTaGAGGGAGGCTCTCTGGACC +
Preference number: 4 (lower is better)
Translates to: PPLSRFFLYSNLHFPPRFAKSGG*REALWT
Trigger: GGTCCAGAGAGCCTCCCTGCAGCCACCAGACTTGGC...GAATCTGGGAGGGAAGTGGAGGTTGCTGTACAGGAAAAACCGAGATAGGGGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000256951.10
ENST00000431267.2
CDS-3UTR GCA 90 bp CAGCTCTCTGCTGGCCCACCCCTTGCAGACTTTGGGCTTGCCTGCCTTCAAAATTCCCCAGCATGTAGGTaGAGCACCCAGCCCCTAGTT +
Preference number: 4 (lower is better)
Translates to: QLSAGPPLADFGLACLQNSPACR*STQPLV
Trigger: AACTAGGGGCTGGGTGCTGCACCTACATGCTGGGGA...ATTTTGAAGGCAGGCAAGCCCAAAGTCTGCAAGGGGTGGGCCAGCAGAGAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR CCA 90 bp TGGACCTCAGTGCATGACCCAGAAGTGGGGCTGGTGTTGTGGCAGCTGATGGGGTCCATGGTGAAGAGCTaGAACACGAAGACCAGGAGG +
Preference number: 4 (lower is better)
Translates to: WTSVHDPEVGLVLWQLMGSMVKS*NTKTRR
Trigger: CCTCCTGGTCTTCGTGTTCCAGCTCTTCACCATGGA...CCCCATCAGCTGCCACAACACCAGCCCCACTTCTGGGTCATGCACTGAGGTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256951.10
ENST00000431267.2
3UTR CAA 72 bp CCGCACTGTAGCACCAGCTCTCTGCTGGCCCACCCCTaGCAGACTTTGGGCTTGCCTGCCTTCAAAATCATG +
Preference number: 4 (lower is better)
Translates to: PHCSTSSLLAHP*QTLGLPAFKIM
Trigger: CATGATTTTGAAGGCAGGCAAGCCCAAAGTCTGCAAGGGGTGGGCCAGCAGAGAGCTGGTGCTACAGTGCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR TCA 90 bp CCCTCCCCTATCTCGGTTTTTCCTGTACAGCAACCTCCACTTCCCTCCCAGATTCAGTGTGGTGGCCCCTaGGAGGAAGAACCGGTTTCC +
Preference number: 4 (lower is better)
Translates to: PSPISVFPVQQPPLPSQIQCGGP*EEEPVS
Trigger: GGAAACCGGTTCTTCCTCTCAGGGGCCACCACACTG...AATCTGGGAGGGAAGTGGAGGTTGCTGTACAGGAAAAACCGAGATAGGGGAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000256951.10
ENST00000396301.7
ENST00000431267.2
ENST00000544053.5
CDS-3UTR TCA 90 bp GAGCATCAAAGTACTAGCCAACTACTTTCTCCCCAGGGCAGGGGCTTGGCAGTACAGTGTGGTGGCCCCTaGGAGGAAGAACCGGTTTCC +
Preference number: 4 (lower is better)
Translates to: EHQSTSQLLSPQGRGLAVQCGGP*EEEPVS
Trigger: GGAAACCGGTTCTTCCTCTCAGGGGCCACCACACTG...TACTGCCAAGCCCCTGCCCTGGGGAGAAAGTAGTTGGCTAGTACTTTGATGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000256951.10
ENST00000431267.2
CDS-3UTR TCA 90 bp TGCAGGGAGGCTCTCTGGACCCCATCAAGGGAGCATCAAAGTACTAGCCAACTATGGTGTTGTGGCAGCTaGTGGGGCCCCAGACAGTGT +
Preference number: 4 (lower is better)
Translates to: CREALWTPSREHQSTSQLWCCGS*WGPRQC
Trigger: ACACTGTCTGGGGCCCCATCAGCTGCCACAACACCA...TAGTTGGCTAGTACTTTGATGCTCCCTTGATGGGGTCCAGAGAGCCTCCCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000256951.10
ENST00000431267.2
CDS-3UTR TCA 90 bp TGCAGGGAGGCTCTCTGGACCCCATCAAGGGAGCATCAAAGTACTAGCCAACTAAGGCCTGCACTGTCTTaGGGGCATCTGAAGGGTCCC +
Preference number: 4 (lower is better)
Translates to: CREALWTPSREHQSTSQLRPALS*GHLKGP
Trigger: GGGACCCTTCAGATGCCCTCAAGACAGTGCAGGCCT...TAGTTGGCTAGTACTTTGATGCTCCCTTGATGGGGTCCAGAGAGCCTCCCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431267.2
CDS-3UTR GCA 90 bp CAGCTCTCTGCTGGCCCACCCCTTGCAGACTTTGGGCTTGCCTGCCTTCAAAATACACCCCCACAAGAATaGACAGCCAGCACACCAGTG +
Preference number: 4 (lower is better)
Translates to: QLSAGPPLADFGLACLQNTPPQE*TASTPV
Trigger: CACTGGTGTGCTGGCTGTGCATTCTTGTGGGGGTGT...ATTTTGAAGGCAGGCAAGCCCAAAGTCTGCAAGGGGTGGGCCAGCAGAGAGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR GCA 90 bp GGGAGGCTCTCTGGACCCCATCAAGGGAGCATCAAAGTACTAGCCAACTACTTTGCCAAGTCTGGTGGCTaGAGGGAGGCTCTCTGGACC +
Preference number: 4 (lower is better)
Translates to: GRLSGPHQGSIKVLANYFAKSGG*REALWT
Trigger: GGTCCAGAGAGCCTCCCTGCAGCCACCAGACTTGGC...AAAGTAGTTGGCTAGTACTTTGATGCTCCCTTGATGGGGTCCAGAGAGCCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256951.10
ENST00000431267.2
CDS-3UTR CCA 90 bp CAAGGGAGCATCAAAGTACTAGCCAACTACTTTCTCCCCAGGGCAGGGGCTTGGAGCACACCAGTGTGGTaGCCCCTGAGAGGAAGAACC +
Preference number: 4 (lower is better)
Translates to: QGSIKVLANYFLPRAGAWSTPVW*PLRGRT
Trigger: GGTTCTTCCTCTCAGGGGCCACCACACTGGTGTGCT...CCAAGCCCCTGCCCTGGGGAGAAAGTAGTTGGCTAGTACTTTGATGCTCCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000256951.10
ENST00000431267.2
CDS-3UTR CCA 90 bp CAGAACCTCATGCCTACCACCCAGCTGTCCTGTCTGGCCCTTGTGGGTCTAGGACTCTCATGTCTGCACTaGTTTGTGTGGCCACGCTGT +
Preference number: 4 (lower is better)
Translates to: QNLMPTTQLSCLALVGLGLSCLH*FVWPRC
Trigger: ACAGCGTGGCCACACAAACCAGTGCAGACATGAGAG...TCCTAGACCCACAAGGGCCAGACAGGACAGCTGGGTGGTAGGCATGAGGTTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544053.5
CDS-3UTR TCA 90 bp AGACTGGAATGTGATGTTTTGCTTTGGGTCAGAAGGGCAGGATGGCTTCCAGGCTGGTGTTGTGGCAGCTaGTGGGGCCCCAGACAGTGT +
Preference number: 4 (lower is better)
Translates to: RLECDVLLWVRRAGWLPGWCCGS*WGPRQC
Trigger: ACACTGTCTGGGGCCCCATCAGCTGCCACAACACCA...GCCTGGAAGCCATCCTGCCCTTCTGACCCAAAGCAAAACATCACATTCCAGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000256951.10
ENST00000431267.2
CDS-3UTR TCA 90 bp CAAGGGAGCATCAAAGTACTAGCCAACTACTTTCTCCCCAGGGCAGGGGCTTGGGCAAAGACCATGGCATaGGGTCTCCATGAGGGACAG +
Preference number: 4 (lower is better)
Translates to: QGSIKVLANYFLPRAGAWAKTMA*GLHEGQ
Trigger: CTGTCCCTCATGGAGACCTCATGCCATGGTCTTTGC...CCAAGCCCCTGCCCTGGGGAGAAAGTAGTTGGCTAGTACTTTGATGCTCCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR TCA 90 bp CCCTCCCCTATCTCGGTTTTTCCTGTACAGCAACCTCCACTTCCCTCCCAGATTAGGGTCCCCAAGAGGTaGTCACTCCAGGTGGTGTCT +
Preference number: 4 (lower is better)
Translates to: PSPISVFPVQQPPLPSQIRVPKR*SLQVVS
Trigger: AGACACCACCTGGAGTGATCACCTCTTGGGGACCCT...AATCTGGGAGGGAAGTGGAGGTTGCTGTACAGGAAAAACCGAGATAGGGGAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR GCA 90 bp GGCCCCAGACAGTGTGTGTCACTAAGAACAGCTGGAGGCCAAGTCTGGTGGCTGCTAACATGGCACTGTTaGAAGACTGCCCCTTGGATC +
Preference number: 4 (lower is better)
Translates to: GPRQCVSLRTAGGQVWWLLTWHC*KTAPWI
Trigger: GATCCAAGGGGCAGTCTTGCAACAGTGCCATGTTAG...CAGCCACCAGACTTGGCCTCCAGCTGTTCTTAGTGACACACACTGTCTGGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR CCA 90 bp CCTCCCCTATCTCGGTTTTTCCTGTACAGCAACCTCCACTTCCCTCCCAGATTCTGCTGGCAGCAGCCCTaGTCCGCTCTTCTGGAAGTA +
Preference number: 4 (lower is better)
Translates to: PPLSRFFLYSNLHFPPRFCWQQP*SALLEV
Trigger: TACTTCCAGAAGAGCGGACCAGGGCTGCTGCCAGCA...GAATCTGGGAGGGAAGTGGAGGTTGCTGTACAGGAAAAACCGAGATAGGGGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256951.10
ENST00000396301.7
ENST00000431267.2
ENST00000544053.5
CDS-3UTR CCA 90 bp GAGCATCAAAGTACTAGCCAACTACTTTCTCCCCAGGGCAGGGGCTTGGCAGTAAGCACACCAGTGTGGTaGCCCCTGAGAGGAAGAACC +
Preference number: 4 (lower is better)
Translates to: EHQSTSQLLSPQGRGLAVSTPVW*PLRGRT
Trigger: GGTTCTTCCTCTCAGGGGCCACCACACTGGTGTGCT...TACTGCCAAGCCCCTGCCCTGGGGAGAAAGTAGTTGGCTAGTACTTTGATGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000256951.10
ENST00000431267.2
CDS-3UTR CCA 90 bp CCCTCCCCTATCTCGGTTTTTCCTGTACAGCAACCTCCACTTCCCTCCCAGATTAGCACACCAGTGTGGTaGCCCCTGAGAGGAAGAACC +
Preference number: 4 (lower is better)
Translates to: PSPISVFPVQQPPLPSQISTPVW*PLRGRT
Trigger: GGTTCTTCCTCTCAGGGGCCACCACACTGGTGTGCT...AATCTGGGAGGGAAGTGGAGGTTGCTGTACAGGAAAAACCGAGATAGGGGAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000256951.10
ENST00000396301.7
ENST00000431267.2
ENST00000544053.5
CDS-3UTR CCA 90 bp CCTCCCCTATCTCGGTTTTTCCTGTACAGCAACCTCCACTTCCCTCCCAGATTCCTGATGGATGTCCCCTaGGCCAAGCTCGACGGTATG +
Preference number: 4 (lower is better)
Translates to: PPLSRFFLYSNLHFPPRFLMDVP*AKLDGM
Trigger: CATACCGTCGAGCTTGGCCCAGGGGACATCCATCAG...GAATCTGGGAGGGAAGTGGAGGTTGCTGTACAGGAAAAACCGAGATAGGGGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000544053.5
CDS-3UTR TCA 90 bp CCTCCCCTATCTCGGTTTTTCCTGTACAGCAACCTCCACTTCCCTCCCAGATTCAGGCCTGCACTGTCTTaGGGGCATCTTCACTGGCAT +
Preference number: 4 (lower is better)
Translates to: PPLSRFFLYSNLHFPPRFRPALS*GHLHWH
Trigger: ATGCCAGTGAAGATGCCCTCAAGACAGTGCAGGCCT...GAATCTGGGAGGGAAGTGGAGGTTGCTGTACAGGAAAAACCGAGATAGGGGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000256951.10
ENST00000396301.7
ENST00000544053.5
CDS-3UTR TCA 90 bp AGGATGGCTTCCAGGCTTAGCGTATTCAGCACAAAGACAGTATCTGCTCTTGCCGCCATGCCTCACCTGTaGAGTGGGATAGGCAGGGTC +
Preference number: 4 (lower is better)
Translates to: RMASRLSVFSTKTVSALAAMPHL*SGIGRV
Trigger: GACCCTGCCTATCCCACTTCACAGGTGAGGCATGGC...GGCAAGAGCAGATACTGTCTTTGTGCTGAATACGCTAAGCCTGGAAGCCATCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR GCA 90 bp TGTTTTGCTTTGGGTCAGAAGGGCAGGATGGCTTCCAGGCTTAGCGTATTCAGCGTCTGTGGACCTCAGTaGATGACCCAGAAGTGGGGC +
Preference number: 4 (lower is better)
Translates to: CFALGQKGRMASRLSVFSVCGPQ*MTQKWG
Trigger: GCCCCACTTCTGGGTCATGCACTGAGGTCCACAGAC...GCTGAATACGCTAAGCCTGGAAGCCATCCTGCCCTTCTGACCCAAAGCAAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256951.10
ENST00000431267.2
CDS-3UTR GCA 90 bp GGCCCCAGACAGTGTGTGTCACTAAGAACAGCTGGAGGCCAAGTCTGGTGGCTGGAGATGCCAGACAATTaGTCATGGCATGAGATAGGG +
Preference number: 4 (lower is better)
Translates to: GPRQCVSLRTAGGQVWWLEMPDN*SWHEIG
Trigger: CCCTATCTCATGCCATGAGCAATTGTCTGGCATCTC...CAGCCACCAGACTTGGCCTCCAGCTGTTCTTAGTGACACACACTGTCTGGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR GCA 90 bp CCCTCCCCTATCTCGGTTTTTCCTGTACAGCAACCTCCACTTCCCTCCCAGATTACACCCCCACAAGAATaGACAGCCCTGCAGGGGAAA +
Preference number: 4 (lower is better)
Translates to: PSPISVFPVQQPPLPSQITPPQE*TALQGK
Trigger: TTTCCCCTGCAGGGCTGTGCATTCTTGTGGGGGTGT...AATCTGGGAGGGAAGTGGAGGTTGCTGTACAGGAAAAACCGAGATAGGGGAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000544053.5
CDS-3UTR CCA 90 bp GGTCAGAAGGGCAGGATGGCTTCCAGGCTTAGCGTATTCAGCACAAAGACAGTATGCAGGGAGGCTCTCTaGACCCCATCAAGGGAGCAT +
Preference number: 4 (lower is better)
Translates to: GQKGRMASRLSVFSTKTVCREAL*TPSREH
Trigger: ATGCTCCCTTGATGGGGTCCAGAGAGCCTCCCTGCA...TACTGTCTTTGTGCTGAATACGCTAAGCCTGGAAGCCATCCTGCCCTTCTGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256951.10
ENST00000431267.2
CDS-3UTR CCA 90 bp CAAGGGAGCATCAAAGTACTAGCCAACTACTTTCTCCCCAGGGCAGGGGCTTGGAGTGCAGTAGGTCTGTaGACCTCAGTGCATGACCCA +
Preference number: 4 (lower is better)
Translates to: QGSIKVLANYFLPRAGAWSAVGL*TSVHDP
Trigger: TGGGTCATGCACTGAGGTCCACAGACCTACTGCACT...CCAAGCCCCTGCCCTGGGGAGAAAGTAGTTGGCTAGTACTTTGATGCTCCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256951.10
ENST00000431267.2
CDS-3UTR CCA 90 bp GGTCAGAAGGGCAGGATGGCTTCCAGGCTTAGCGTATTCAGCACAAAGACAGTACTCCAGTTCCCCAGATaGAAGACAAGGAGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: GQKGRMASRLSVFSTKTVLQFPR*KTRRPW
Trigger: CCAGGGCCTCCTTGTCTTCCATCTGGGGAACTGGAG...TACTGTCTTTGTGCTGAATACGCTAAGCCTGGAAGCCATCCTGCCCTTCTGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR CCA 90 bp AGACTGGAATGTGATGTTTTGCTTTGGGTCAGAAGGGCAGGATGGCTTCCAGGCCTTATGCTAGTGTTCTaGCCCTCCCTGCCCCGACAG +
Preference number: 4 (lower is better)
Translates to: RLECDVLLWVRRAGWLPGLMLVF*PSLPRQ
Trigger: CTGTCGGGGCAGGGAGGGCCAGAACACTAGCATAAG...GCCTGGAAGCCATCCTGCCCTTCTGACCCAAAGCAAAACATCACATTCCAGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR TCA 90 bp AAATTAGAGGTGTCTGGGCTCTCATGTCTGCACTGGTTTGTGTGGCCACGCTGTAGGCCTGCACTGTCTTaGGGGCATCTTCACTGGCAT +
Preference number: 4 (lower is better)
Translates to: KLEVSGLSCLHWFVWPRCRPALS*GHLHWH
Trigger: ATGCCAGTGAAGATGCCCTCAAGACAGTGCAGGCCT...ACAGCGTGGCCACACAAACCAGTGCAGACATGAGAGCCCAGACACCTCTAATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544053.5
CDS-3UTR TCA 90 bp CAGCTCTCTGCTGGCCCACCCCTTGCAGACTTTGGGCTTGCCTGCCTTCAAAATTTTGGGTCCCATTCTTaGGTGGTCATGGAGAGTTCT +
Preference number: 4 (lower is better)
Translates to: QLSAGPPLADFGLACLQNFGSHS*VVMESS
Trigger: AGAACTCTCCATGACCACTCAAGAATGGGACCCAAA...ATTTTGAAGGCAGGCAAGCCCAAAGTCTGCAAGGGGTGGGCCAGCAGAGAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR GCA 90 bp AGACTGGAATGTGATGTTTTGCTTTGGGTCAGAAGGGCAGGATGGCTTCCAGGCACACCCCCACAAGAATaGACAGCCAGCACACCAGTG +
Preference number: 4 (lower is better)
Translates to: RLECDVLLWVRRAGWLPGTPPQE*TASTPV
Trigger: CACTGGTGTGCTGGCTGTGCATTCTTGTGGGGGTGT...GCCTGGAAGCCATCCTGCCCTTCTGACCCAAAGCAAAACATCACATTCCAGTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000256951.10
ENST00000431267.2
CDS-3UTR GCA 90 bp GCAGGATGGCTTCCAGGCTTAGCGTATTCAGCACAAAGACAGTATCTGCTCTTGGTCTGTGGACCTCAGTaGATGACCCAGAAGTGGGGC +
Preference number: 4 (lower is better)
Translates to: AGWLPGLAYSAQRQYLLLVCGPQ*MTQKWG
Trigger: GCCCCACTTCTGGGTCATGCACTGAGGTCCACAGAC...CAAGAGCAGATACTGTCTTTGTGCTGAATACGCTAAGCCTGGAAGCCATCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256951.10
ENST00000431267.2
CDS-3UTR GCA 90 bp GGCCCCAGACAGTGTGTGTCACTAAGAACAGCTGGAGGCCAAGTCTGGTGGCTGTGCAGACTTTGGGCTTaGCTGCCTTCAAAATCATGT +
Preference number: 4 (lower is better)
Translates to: GPRQCVSLRTAGGQVWWLCRLWA*LPSKSC
Trigger: ACATGATTTTGAAGGCAGGCAAGCCCAAAGTCTGCA...CAGCCACCAGACTTGGCCTCCAGCTGTTCTTAGTGACACACACTGTCTGGGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR GCA 90 bp CCCCATTCACCATCCAGGCTTTTGAGGAGAAAGATACCAATCTTAGCAGCAGAGTGCTGGCCCACCCCTTaGAGACTTTGGGCTTGCCTG +
Preference number: 4 (lower is better)
Translates to: PHSPSRLLRRKIPILAAECWPTP*RLWACL
Trigger: CAGGCAAGCCCAAAGTCTGCAAGGGGTGGGCCAGCA...CTCTGCTGCTAAGATTGGTATCTTTCTCCTCAAAAGCCTGGATGGTGAATGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR GCA 90 bp GAACCTCATGCCTACCACCCAGCTGTCCTGTCTGGCCCTTGTGGGTCTAGGAAACTAACAGATATGCACTaGCACTTGGTAGCTACCCAG +
Preference number: 4 (lower is better)
Translates to: EPHAYHPAVLSGPCGSRKLTDMH*HLVATQ
Trigger: CTGGGTAGCTACCAAGTGGCAGTGCATATCTGTTAG...TTTCCTAGACCCACAAGGGCCAGACAGGACAGCTGGGTGGTAGGCATGAGGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544053.5
CDS-3UTR GCA 90 bp AAATTAGAGGTGTCTGGGCTCTCATGTCTGCACTGGTTTGTGTGGCCACGCTGTCTGGGCTCTCATGTCTaGACTGGTTTGTGTGGCCAC +
Preference number: 4 (lower is better)
Translates to: KLEVSGLSCLHWFVWPRCLGSHV*TGLCGH
Trigger: GTGGCCACACAAACCAGTGCAGACATGAGAGCCCAG...ACAGCGTGGCCACACAAACCAGTGCAGACATGAGAGCCCAGACACCTCTAATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544053.5
CDS-3UTR CCA 90 bp CCCTCCCCTATCTCGGTTTTTCCTGTACAGCAACCTCCACTTCCCTCCCAGATTTCCATGGTGAAGAGCTaGAACACGAAGACCAGGAGG +
Preference number: 4 (lower is better)
Translates to: PSPISVFPVQQPPLPSQISMVKS*NTKTRR
Trigger: CCTCCTGGTCTTCGTGTTCCAGCTCTTCACCATGGA...AATCTGGGAGGGAAGTGGAGGTTGCTGTACAGGAAAAACCGAGATAGGGGAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256951.10
ENST00000396301.7
ENST00000431267.2
ENST00000544053.5
CDS-3UTR CCA 90 bp TGTGATGTTTTGCTTTGGGTCAGAAGGGCAGGATGGCTTCCAGGCTTAGCGTATTGCATGACCCAGAAGTaGGGCTGGTGTTGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: CDVLLWVRRAGWLPGLAYCMTQK*GWCCGS
Trigger: GCTGCCACAACACCAGCCCCACTTCTGGGTCATGCA...ATACGCTAAGCCTGGAAGCCATCCTGCCCTTCTGACCCAAAGCAAAACATCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256951.10
ENST00000431267.2
CDS-3UTR CCA 90 bp GCAGGATGGCTTCCAGGCTTAGCGTATTCAGCACAAAGACAGTATCTGCTCTTGTGCATGACCCAGAAGTaGGGCTGGTGTTGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: AGWLPGLAYSAQRQYLLLCMTQK*GWCCGS
Trigger: GCTGCCACAACACCAGCCCCACTTCTGGGTCATGCA...CAAGAGCAGATACTGTCTTTGTGCTGAATACGCTAAGCCTGGAAGCCATCCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256951.10
ENST00000431267.2
CDS-3UTR CCA 90 bp CCCTCCCCTATCTCGGTTTTTCCTGTACAGCAACCTCCACTTCCCTCCCAGATTAGTGCAGTAGGTCTGTaGACCTCAGTGCATGACCCA +
Preference number: 4 (lower is better)
Translates to: PSPISVFPVQQPPLPSQISAVGL*TSVHDP
Trigger: TGGGTCATGCACTGAGGTCCACAGACCTACTGCACT...AATCTGGGAGGGAAGTGGAGGTTGCTGTACAGGAAAAACCGAGATAGGGGAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000256951.10
ENST00000431267.2
CDS-3UTR CCA 90 bp CTCAGTGCAGTAGGTCTGTGGACCTCAGTGCATGACCCAGAAGTGGGGCTGGTGTCCCACAGTTTTTGCTaGCCAATCTCTCTAACCTCA +
Preference number: 4 (lower is better)
Translates to: LSAVGLWTSVHDPEVGLVSHSFC*PISLTS
Trigger: TGAGGTTAGAGAGATTGGCCAGCAAAAACTGTGGGA...CACCAGCCCCACTTCTGGGTCATGCACTGAGGTCCACAGACCTACTGCACTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR CCA 90 bp TGGCTTCCAGGCTTAGCGTATTCAGCACAAAGACAGTATCTGCTCTTGCCAGAAGCACCAGCTCTCTGCTaGCCCACCCCTTGCAGACTT +
Preference number: 4 (lower is better)
Translates to: WLPGLAYSAQRQYLLLPEAPALC*PTPCRL
Trigger: AAGTCTGCAAGGGGTGGGCCAGCAGAGAGCTGGTGC...TTCTGGCAAGAGCAGATACTGTCTTTGTGCTGAATACGCTAAGCCTGGAAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR TCA 90 bp CCCTCCCCTATCTCGGTTTTTCCTGTACAGCAACCTCCACTTCCCTCCCAGATTTTCCCTTCTCCATGGTaGAGAGCTGGAACACGAAGA +
Preference number: 4 (lower is better)
Translates to: PSPISVFPVQQPPLPSQIFPSPW*RAGTRR
Trigger: TCTTCGTGTTCCAGCTCTTCACCATGGAGAAGGGAA...AATCTGGGAGGGAAGTGGAGGTTGCTGTACAGGAAAAACCGAGATAGGGGAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000256951.10
ENST00000396301.7
ENST00000431267.2
ENST00000544053.5
CDS-3UTR TCA 90 bp ACTAACAGATATGCACTGCCACTTGGTAGCTACCCAGGAGCACTGGTTTTGAACGAAACCAACCAGACCTaGAGGGTCCCAGCGACAGAG +
Preference number: 4 (lower is better)
Translates to: TNRYALPLGSYPGALVLNETNQT*RVPATE
Trigger: CTCTGTCGCTGGGACCCTTCAGGTCTGGTTGGTTTC...GTTCAAAACCAGTGCTCCTGGGTAGCTACCAAGTGGCAGTGCATATCTGTTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544053.5
CDS-3UTR GCA 90 bp CCCCAGACAGTGTGTGTCACTAAGAACAGCTGGAGGCCAAGTCTGGTGGCTGCATGGAATGTGATGTTTTaGTTTGGGTCAGAAGGGCAG +
Preference number: 4 (lower is better)
Translates to: PQTVCVTKNSWRPSLVAAWNVMF*FGSEGQ
Trigger: CTGCCCTTCTGACCCAAAGCAAAACATCACATTCCA...TGCAGCCACCAGACTTGGCCTCCAGCTGTTCTTAGTGACACACACTGTCTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256951.10
ENST00000431267.2
CDS-3UTR GCA 90 bp CCTCCCCTATCTCGGTTTTTCCTGTACAGCAACCTCCACTTCCCTCCCAGATTCCTCCCTAGGCATTCATaGTCCCACCTCATCTACATC +
Preference number: 4 (lower is better)
Translates to: PPLSRFFLYSNLHFPPRFLPRHS*SHLIYI
Trigger: GATGTAGATGAGGTGGGAGCATGAATGCCTAGGGAG...GAATCTGGGAGGGAAGTGGAGGTTGCTGTACAGGAAAAACCGAGATAGGGGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR GCA 90 bp GGGAGGCTCTCTGGACCCCATCAAGGGAGCATCAAAGTACTAGCCAACTACTTTCCAACCCACAGGAGATaGCAGACAATTGCTCATGGC +
Preference number: 4 (lower is better)
Translates to: GRLSGPHQGSIKVLANYFPTHRR*QTIAHG
Trigger: GCCATGAGCAATTGTCTGGCATCTCCTGTGGGTTGG...AAAGTAGTTGGCTAGTACTTTGATGCTCCCTTGATGGGGTCCAGAGAGCCTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR GCA 90 bp AAAAGTAGGCAAGATGTCTCAGATTCTCCCTGGGGTAGATCTTCTCAGGGCGATTGTTCTGGCCCTCCCTaGCCCGACAGTGATAGAAGC +
Preference number: 4 (lower is better)
Translates to: KSRQDVSDSPWGRSSQGDCSGPP*PDSDRS
Trigger: GCTTCTATCACTGTCGGGGCAGGGAGGGCCAGAACA...ATCGCCCTGAGAAGATCTACCCCAGGGAGAATCTGAGACATCTTGCCTACTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR CCA 90 bp GCAGGATGGCTTCCAGGCTTAGCGTATTCAGCACAAAGACAGTATCTGCTCTTGCCTGGTCCGCTCTTCTaGAAGTATGTGACCGCACTG +
Preference number: 4 (lower is better)
Translates to: AGWLPGLAYSAQRQYLLLPGPLF*KYVTAL
Trigger: CAGTGCGGTCACATACTTCCAGAAGAGCGGACCAGG...CAAGAGCAGATACTGTCTTTGTGCTGAATACGCTAAGCCTGGAAGCCATCCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256951.10
ENST00000431267.2
CDS-3UTR CCA 90 bp GAGTCTGACAAAAGTTCCCTCTGCAGAAGGGATGGAAGGATAGCCTTGGGGGTTGTCAGAAGGGCAGGATaGCTTCCAGGCTTAGCGTAT +
Preference number: 4 (lower is better)
Translates to: ESDKSSLCRRDGRIALGVVRRAG*LPGLAY
Trigger: ATACGCTAAGCCTGGAAGCCATCCTGCCCTTCTGAC...AACCCCCAAGGCTATCCTTCCATCCCTTCTGCAGAGGGAACTTTTGTCAGACTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR CCA 90 bp GGTCAGAAGGGCAGGATGGCTTCCAGGCTTAGCGTATTCAGCACAAAGACAGTACCAGAAGAGCTGCCTTaGCTTTCAGCAAGAGGCCTA +
Preference number: 4 (lower is better)
Translates to: GQKGRMASRLSVFSTKTVPEELP*LSARGL
Trigger: TAGGCCTCTTGCTGAAAGCCAAGGCAGCTCTTCTGG...TACTGTCTTTGTGCTGAATACGCTAAGCCTGGAAGCCATCCTGCCCTTCTGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR CCA 90 bp CCCCAGACAGTGTGTGTCACTAAGAACAGCTGGAGGCCAAGTCTGGTGGCTGCAATGCTGACAGTGATGTaGACGATTAAGTCCACACTG +
Preference number: 4 (lower is better)
Translates to: PQTVCVTKNSWRPSLVAAMLTVM*TIKSTL
Trigger: CAGTGTGGACTTAATCGTCCACATCACTGTCAGCAT...TGCAGCCACCAGACTTGGCCTCCAGCTGTTCTTAGTGACACACACTGTCTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR CCA 90 bp TGGACCTCAGTGCATGACCCAGAAGTGGGGCTGGTGTTGTGGCAGCTGATGGGGAAGTTTGGAGCTTCCTaGAGACTTGTTGAATGGTTT +
Preference number: 4 (lower is better)
Translates to: WTSVHDPEVGLVLWQLMGKFGAS*RLVEWF
Trigger: AAACCATTCAACAAGTCTCCAGGAAGCTCCAAACTT...CCCCATCAGCTGCCACAACACCAGCCCCACTTCTGGGTCATGCACTGAGGTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR CCA 90 bp CAGAACCTCATGCCTACCACCCAGCTGTCCTGTCTGGCCCTTGTGGGTCTAGGAATGCATCTACCGTATTaGAAACCAACCAGACCTGAA +
Preference number: 4 (lower is better)
Translates to: QNLMPTTQLSCLALVGLGMHLPY*KPTRPE
Trigger: TTCAGGTCTGGTTGGTTTCCAATACGGTAGATGCAT...TCCTAGACCCACAAGGGCCAGACAGGACAGCTGGGTGGTAGGCATGAGGTTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544053.5
CDS-3UTR TCA 90 bp AAAAGTAGGCAAGATGTCTCAGATTCTCCCTGGGGTAGATCTTCTCAGGGCGATAGGCCTGCACTGTCTTaGGGGCATCTTCACTGGCAT +
Preference number: 4 (lower is better)
Translates to: KSRQDVSDSPWGRSSQGDRPALS*GHLHWH
Trigger: ATGCCAGTGAAGATGCCCTCAAGACAGTGCAGGCCT...ATCGCCCTGAGAAGATCTACCCCAGGGAGAATCTGAGACATCTTGCCTACTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR TCA 90 bp GGCACTTCAGACTGGAATGTGATGTTTTGCTTTGGGTCAGAAGGGCAGGATGGCTTCCCTTCTCCATGGTaGAGAGCTGGAACACGAAGA +
Preference number: 4 (lower is better)
Translates to: GTSDWNVMFCFGSEGQDGFPSPW*RAGTRR
Trigger: TCTTCGTGTTCCAGCTCTTCACCATGGAGAAGGGAA...GCCATCCTGCCCTTCTGACCCAAAGCAAAACATCACATTCCAGTCTGAAGTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256951.10
ENST00000431267.2
CDS-3UTR TCA 90 bp GAAAGCTACTCAGGGATGCAAAAGAGCATGTCCTTCCACCAAACCGAGTATATTCAGTGTGGTGGCCCCTaGGAGGAAGAACCGGTTTCC +
Preference number: 4 (lower is better)
Translates to: ESYSGMQKSMSFHQTEYIQCGGP*EEEPVS
Trigger: GGAAACCGGTTCTTCCTCTCAGGGGCCACCACACTG...AATATACTCGGTTTGGTGGAAGGACATGCTCTTTTGCATCCCTGAGTAGCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544053.5
CDS-3UTR TCA 90 bp CTGCTTCACATTAAAACCCTCCTTATTGTATTGGTGCTGACACGACACAAGGATAGGGACAGCCGTGTGTaGGGTCTCGACTGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: LLHIKTLLIVLVLTRHKDRDSRV*GLDWAL
Trigger: CAGAGCCCAGTCGAGACCTCACACACGGCTGTCCCT...ATCCTTGTGTCGTGTCAGCACCAATACAATAAGGAGGGTTTTAATGTGAAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR TCA 90 bp TGTTTTGCTTTGGGTCAGAAGGGCAGGATGGCTTCCAGGCTTAGCGTATTCAGCCATCAACGCCCATCCTaGCATCAGCATAAAGCACAG +
Preference number: 4 (lower is better)
Translates to: CFALGQKGRMASRLSVFSHQRPS*HQHKAQ
Trigger: CTGTGCTTTATGCTGATGTCAGGATGGGCGTTGATG...GCTGAATACGCTAAGCCTGGAAGCCATCCTGCCCTTCTGACCCAAAGCAAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR TCA 90 bp TCCCTCTGCAGAAGGGATGGAAGGATAGCCTTGGGGGTTGATTTAGGACTGGGTGGTCTCAGAAGGAGATaGGGAACTTATTGGGAACTG +
Preference number: 4 (lower is better)
Translates to: SLCRRDGRIALGVDLGLGGLRRR*GTYWEL
Trigger: CAGTTCCCAATAAGTTCCTCATCTCCTTCTGAGACC...ACCCAGTCCTAAATCAACCCCCAAGGCTATCCTTCCATCCCTTCTGCAGAGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR GCA 90 bp GGCACTTCAGACTGGAATGTGATGTTTTGCTTTGGGTCAGAAGGGCAGGATGGCCTTCCAGAATTGCCATaGCTCACCTGTGAAGTGGGA +
Preference number: 4 (lower is better)
Translates to: GTSDWNVMFCFGSEGQDGLPELP*LTCEVG
Trigger: TCCCACTTCACAGGTGAGGCATGGCAATTCTGGAAG...GCCATCCTGCCCTTCTGACCCAAAGCAAAACATCACATTCCAGTCTGAAGTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR GCA 90 bp TGCCCCTTGGATCCCATAGTTTGTGTGGTACTTTTACCACCGAATTGTTCACTAGTAGCACCAGCTCTCTaGTGGCCCACCCCTTGCAGA +
Preference number: 4 (lower is better)
Translates to: CPLDPIVCVVLLPPNCSLVAPAL*WPTPCR
Trigger: TCTGCAAGGGGTGGGCCAGCAGAGAGCTGGTGCTAC...TAGTGAACAATTCGGTGGTAAAAGTACCACACAAACTATGGGATCCAAGGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR CCA 90 bp GCCGTGGTGATACTGCGTTCCATCACGATTCGCATAATGACTAGTGTAGATGGACCTGGTCCGCTCTTCTaGAAGTATGTGACCGCACTG +
Preference number: 4 (lower is better)
Translates to: AVVILRSITIRIMTSVDGPGPLF*KYVTAL
Trigger: CAGTGCGGTCACATACTTCCAGAAGAGCGGACCAGG...TCCATCTACACTAGTCATTATGCGAATCGTGATGGAACGCAGTATCACCACGGC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544053.5
CDS-3UTR CCA 90 bp CCAGGCTTAGCGTATTCAGCACAAAGACAGTATCTGCTCTTGCCAGAACTTGTATGCAGGGAGGCTCTCTaGACCCCATCAAGGGAGCAT +
Preference number: 4 (lower is better)
Translates to: PGLAYSAQRQYLLLPELVCREAL*TPSREH
Trigger: ATGCTCCCTTGATGGGGTCCAGAGAGCCTCCCTGCA...TACAAGTTCTGGCAAGAGCAGATACTGTCTTTGTGCTGAATACGCTAAGCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256951.10
ENST00000431267.2
CDS-3UTR CCA 90 bp GCAGGATGGCTTCCAGGCTTAGCGTATTCAGCACAAAGACAGTATCTGCTCTTGGTCAGAAGGGCAGGATaGCTTCCAGGCTTAGCGTAT +
Preference number: 4 (lower is better)
Translates to: AGWLPGLAYSAQRQYLLLVRRAG*LPGLAY
Trigger: ATACGCTAAGCCTGGAAGCCATCCTGCCCTTCTGAC...CAAGAGCAGATACTGTCTTTGTGCTGAATACGCTAAGCCTGGAAGCCATCCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256951.10
ENST00000431267.2
CDS-3UTR CCA 90 bp CCCTCCCCTATCTCGGTTTTTCCTGTACAGCAACCTCCACTTCCCTCCCAGATTTGTGATGTTTTGCTTTaGGTCAGAAGGGCAGGATGG +
Preference number: 4 (lower is better)
Translates to: PSPISVFPVQQPPLPSQICDVLL*VRRAGW
Trigger: CCATCCTGCCCTTCTGACCCAAAGCAAAACATCACA...AATCTGGGAGGGAAGTGGAGGTTGCTGTACAGGAAAAACCGAGATAGGGGAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000256951.10
ENST00000431267.2
CDS-3UTR CCA 90 bp CCCCATTCACCATCCAGGCTTTTGAGGAGAAAGATACCAATCTTAGCAGCAGAGTCCAAAGAGGGACAATaGCTCACAGGCCAAAGCCCC +
Preference number: 4 (lower is better)
Translates to: PHSPSRLLRRKIPILAAESKEGQ*LTGQSP
Trigger: GGGGCTTTGGCCTGTGAGCCATTGTCCCTCTTTGGA...CTCTGCTGCTAAGATTGGTATCTTTCTCCTCAAAAGCCTGGATGGTGAATGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR CCA 90 bp TGGCTTCCAGGCTTAGCGTATTCAGCACAAAGACAGTATCTGCTCTTGCCAGAATCCAAAGAGGGACAATaGCTCACAGGCCAAAGCCCC +
Preference number: 4 (lower is better)
Translates to: WLPGLAYSAQRQYLLLPESKEGQ*LTGQSP
Trigger: GGGGCTTTGGCCTGTGAGCCATTGTCCCTCTTTGGA...TTCTGGCAAGAGCAGATACTGTCTTTGTGCTGAATACGCTAAGCCTGGAAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256951.10
ENST00000431267.2
CDS-3UTR CCA 90 bp GCAGGATGGCTTCCAGGCTTAGCGTATTCAGCACAAAGACAGTATCTGCTCTTGGGTGATCACTCCAGGTaGTGTCTAAGCCAGAGCTAC +
Preference number: 4 (lower is better)
Translates to: AGWLPGLAYSAQRQYLLLGDHSR*CLSQSY
Trigger: GTAGCTCTGGCTTAGACACCACCTGGAGTGATCACC...CAAGAGCAGATACTGTCTTTGTGCTGAATACGCTAAGCCTGGAAGCCATCCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR CCA 90 bp AGGATGGCTTCCAGGCTTAGCGTATTCAGCACAAAGACAGTATCTGCTCTTGCCGTCTCAGATTCTCCCTaGGGTAGATCTTCTCAGGGC +
Preference number: 4 (lower is better)
Translates to: RMASRLSVFSTKTVSALAVSDSP*GRSSQG
Trigger: GCCCTGAGAAGATCTACCCCAGGGAGAATCTGAGAC...GGCAAGAGCAGATACTGTCTTTGTGCTGAATACGCTAAGCCTGGAAGCCATCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR CCA 90 bp AAAAGTAGGCAAGATGTCTCAGATTCTCCCTGGGGTAGATCTTCTCAGGGCGATCCTCTGCAGAAGGGATaGAAGGATAGCCTTGGGGGT +
Preference number: 4 (lower is better)
Translates to: KSRQDVSDSPWGRSSQGDPLQKG*KDSLGG
Trigger: ACCCCCAAGGCTATCCTTCCATCCCTTCTGCAGAGG...ATCGCCCTGAGAAGATCTACCCCAGGGAGAATCTGAGACATCTTGCCTACTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR CCA 90 bp GGTCAGAAGGGCAGGATGGCTTCCAGGCTTAGCGTATTCAGCACAAAGACAGTAACACAGGGACTGCGATaGCTAAATCCAAGGCAGAGT +
Preference number: 4 (lower is better)
Translates to: GQKGRMASRLSVFSTKTVTQGLR*LNPRQS
Trigger: ACTCTGCCTTGGATTTAGCCATCGCAGTCCCTGTGT...TACTGTCTTTGTGCTGAATACGCTAAGCCTGGAAGCCATCCTGCCCTTCTGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256951.10
3UTR CAA 72 bp GCAGCAGAGGACACTCTGGATAGAGCTAGGAGTTTGTaGCAGAGTCTGACAAAAGTTCCCTCTGCAGAAGGG +
Preference number: 4 (lower is better)
Translates to: AAEDTLDRARSL*QSLTKVPSAEG
Trigger: CCCTTCTGCAGAGGGAACTTTTGTCAGACTCTGCAACAAACTCCTAGCTCTATCCAGAGTGTCCTCTGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR TCA 90 bp ATGGTTTTAACCAAAATGCTGACAGTGATGTGGACGATTAAGTCCACACTGAGGGTGGACCTCAGTGCATaGCCCAGAAGTGGGGCTGGT +
Preference number: 4 (lower is better)
Translates to: MVLTKMLTVMWTIKSTLRVDLSA*PRSGAG
Trigger: ACCAGCCCCACTTCTGGGTCATGCACTGAGGTCCAC...CCTCAGTGTGGACTTAATCGTCCACATCACTGTCAGCATTTTGGTTAAAACCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR TCA 90 bp TCCCTCTGCAGAAGGGATGGAAGGATAGCCTTGGGGGTTGATTTAGGACTGGGTCTTCAGACTGGAATGTaGTGTTTTGCTTTGGGTCAG +
Preference number: 4 (lower is better)
Translates to: SLCRRDGRIALGVDLGLGLQTGM*CFALGQ
Trigger: CTGACCCAAAGCAAAACATCACATTCCAGTCTGAAG...ACCCAGTCCTAAATCAACCCCCAAGGCTATCCTTCCATCCCTTCTGCAGAGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR TCA 90 bp CAGGGCAGGGGCTTGGCAGTAGAGAATCCCCTCAGTAATGGTTTGGGATTTGACCTTCAGACTGGAATGTaGTGTTTTGCTTTGGGTCAG +
Preference number: 4 (lower is better)
Translates to: QGRGLAVENPLSNGLGFDLQTGM*CFALGQ
Trigger: CTGACCCAAAGCAAAACATCACATTCCAGTCTGAAG...GTCAAATCCCAAACCATTACTGAGGGGATTCTCTACTGCCAAGCCCCTGCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000256951.10
ENST00000431267.2
CDS-3UTR TCA 90 bp GAGTCTGACAAAAGTTCCCTCTGCAGAAGGGATGGAAGGATAGCCTTGGGGGTTAGGATTGTGCTACAATaGGCCATGTCCATCTCTCTC +
Preference number: 4 (lower is better)
Translates to: ESDKSSLCRRDGRIALGVRIVLQ*AMSISL
Trigger: GAGAGAGATGGACATGGCTCATTGTAGCACAATCCT...AACCCCCAAGGCTATCCTTCCATCCCTTCTGCAGAGGGAACTTTTGTCAGACTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR GCA 90 bp CCTCCCCTATCTCGGTTTTTCCTGTACAGCAACCTCCACTTCCCTCCCAGATTCGTTATAAGTTTCCTCTaGTGGTGTACTGGGGTGTGT +
Preference number: 4 (lower is better)
Translates to: PPLSRFFLYSNLHFPPRFVISFL*WCTGVC
Trigger: ACACACCCCAGTACACCAGCAGAGGAAACTTATAAC...GAATCTGGGAGGGAAGTGGAGGTTGCTGTACAGGAAAAACCGAGATAGGGGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000256951.10
ENST00000431267.2
ENST00000544053.5
CDS-3UTR GCA 90 bp TGCAGGGAGGCTCTCTGGACCCCATCAAGGGAGCATCAAAGTACTAGCCAACTATCTTCCCACAGTTTTTaGTGGCCAATCTCTCTAACC +
Preference number: 4 (lower is better)
Translates to: CREALWTPSREHQSTSQLSSHSF*WPISLT
Trigger: GGTTAGAGAGATTGGCCAGCAAAAACTGTGGGAAGA...TAGTTGGCTAGTACTTTGATGCTCCCTTGATGGGGTCCAGAGAGCCTCCCTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR GCA 90 bp CAGGGCAGGGGCTTGGCAGTAGAGAATCCCCTCAGTAATGGTTTGGGATTTGACAAGGGGCTGGAAGATTaGCTGCTTCACATTAAAACC +
Preference number: 4 (lower is better)
Translates to: QGRGLAVENPLSNGLGFDKGLED*LLHIKT
Trigger: GGTTTTAATGTGAAGCAGGCAATCTTCCAGCCCCTT...GTCAAATCCCAAACCATTACTGAGGGGATTCTCTACTGCCAAGCCCCTGCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR GCA 90 bp GGGAGGCTCTCTGGACCCCATCAAGGGAGCATCAAAGTACTAGCCAACTACTTTTTGGCAAGTAAGAAATaGAGCAGTGGTCCAACCCAC +
Preference number: 4 (lower is better)
Translates to: GRLSGPHQGSIKVLANYFLASKK*SSGPTH
Trigger: GTGGGTTGGACCACTGCTGCATTTCTTACTTGCCAA...AAAGTAGTTGGCTAGTACTTTGATGCTCCCTTGATGGGGTCCAGAGAGCCTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR CCA 90 bp CCTCCCCTATCTCGGTTTTTCCTGTACAGCAACCTCCACTTCCCTCCCAGATTCATAACAGTAGCGATGTaGACCACAAAGATACCAGCC +
Preference number: 4 (lower is better)
Translates to: PPLSRFFLYSNLHFPPRFITVAM*TTKIPA
Trigger: GGCTGGTATCTTTGTGGTCCACATCGCTACTGTTAT...GAATCTGGGAGGGAAGTGGAGGTTGCTGTACAGGAAAAACCGAGATAGGGGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000256951.10
ENST00000396301.7
CDS-3UTR CCA 90 bp TGCAGGGAGGCTCTCTGGACCCCATCAAGGGAGCATCAAAGTACTAGCCAACTAAACATAACCCTAACATaGCACTGTTGCAAGACTGCC +
Preference number: 4 (lower is better)
Translates to: CREALWTPSREHQSTSQLNITLT*HCCKTA
Trigger: GGCAGTCTTGCAACAGTGCCATGTTAGGGTTATGTT...TAGTTGGCTAGTACTTTGATGCTCCCTTGATGGGGTCCAGAGAGCCTCCCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR CCA 90 bp TGTTTTGCTTTGGGTCAGAAGGGCAGGATGGCTTCCAGGCTTAGCGTATTCAGCCAGCAGAGGACACTCTaGATAGAGCTAGGAGTTTGT +
Preference number: 4 (lower is better)
Translates to: CFALGQKGRMASRLSVFSQQRTL*IELGVC
Trigger: ACAAACTCCTAGCTCTATCCAGAGTGTCCTCTGCTG...GCTGAATACGCTAAGCCTGGAAGCCATCCTGCCCTTCTGACCCAAAGCAAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR CCA 90 bp CCAGGCTTAGCGTATTCAGCACAAAGACAGTATCTGCTCTTGCCAGAACTTGTAAACCCCGCCTTCCCTTaGGCTCCACACAATCAGCAT +
Preference number: 4 (lower is better)
Translates to: PGLAYSAQRQYLLLPELVNPAFP*APHNQH
Trigger: ATGCTGATTGTGTGGAGCCCAAGGGAAGGCGGGGTT...TACAAGTTCTGGCAAGAGCAGATACTGTCTTTGTGCTGAATACGCTAAGCCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR CCA 90 bp TGCAGGGAGGCTCTCTGGACCCCATCAAGGGAGCATCAAAGTACTAGCCAACTAAAGACAAGGAGGCCCTaGAACAAAGGAATGGCATTT +
Preference number: 4 (lower is better)
Translates to: CREALWTPSREHQSTSQLKTRRP*NKGMAF
Trigger: AAATGCCATTCCTTTGTTCCAGGGCCTCCTTGTCTT...TAGTTGGCTAGTACTTTGATGCTCCCTTGATGGGGTCCAGAGAGCCTCCCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR CCA 90 bp TGTGATGTTTTGCTTTGGGTCAGAAGGGCAGGATGGCTTCCAGGCTTAGCGTATGTAACGGGTAGAGGTTaGAAGAGTTTGGAGGGCTCA +
Preference number: 4 (lower is better)
Translates to: CDVLLWVRRAGWLPGLAYVTGRG*KSLEGS
Trigger: TGAGCCCTCCAAACTCTTCCAACCTCTACCCGTTAC...ATACGCTAAGCCTGGAAGCCATCCTGCCCTTCTGACCCAAAGCAAAACATCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR TCA 90 bp CCCTCCCCTATCTCGGTTTTTCCTGTACAGCAACCTCCACTTCCCTCCCAGATTTTTCCAAAGACCTACTaGTGCATCTACCGTATTGGA +
Preference number: 4 (lower is better)
Translates to: PSPISVFPVQQPPLPSQIFPKTY*CIYRIG
Trigger: TCCAATACGGTAGATGCATCAGTAGGTCTTTGGAAA...AATCTGGGAGGGAAGTGGAGGTTGCTGTACAGGAAAAACCGAGATAGGGGAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000256951.10
ENST00000396301.7
ENST00000544053.5
CDS-3UTR TCA 90 bp TGCAGGGAGGCTCTCTGGACCCCATCAAGGGAGCATCAAAGTACTAGCCAACTATTATTGTATTGGTGCTaGCACGACACAAGGATATGC +
Preference number: 4 (lower is better)
Translates to: CREALWTPSREHQSTSQLLLYWC*HDTRIC
Trigger: GCATATCCTTGTGTCGTGTCAGCACCAATACAATAA...TAGTTGGCTAGTACTTTGATGCTCCCTTGATGGGGTCCAGAGAGCCTCCCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR TCA 90 bp GCCGTGGTGATACTGCGTTCCATCACGATTCGCATAATGACTAGTGTAGATGGAACTGGAGTCTACCCATaGGATACTCACAGCACACCA +
Preference number: 4 (lower is better)
Translates to: AVVILRSITIRIMTSVDGTGVYP*DTHSTP
Trigger: TGGTGTGCTGTGAGTATCTCATGGGTAGACTCCAGT...TCCATCTACACTAGTCATTATGCGAATCGTGATGGAACGCAGTATCACCACGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544053.5
CDS-3UTR TCA 90 bp TGTACACACGTGCTACTAACAGATATGCACTGCCACTTGGTAGCTACCCAGGAGCAGGAGCACTGGTTTTaGACAATGAAGCAGATGAGG +
Preference number: 4 (lower is better)
Translates to: CTHVLLTDMHCHLVATQEQEHWF*TMKQMR
Trigger: CCTCATCTGCTTCATTGTTCAAAACCAGTGCTCCTG...CTCCTGGGTAGCTACCAAGTGGCAGTGCATATCTGTTAGTAGCACGTGTGTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544053.5
CDS-3UTR TCA 90 bp GAACCTCATGCCTACCACCCAGCTGTCCTGTCTGGCCCTTGTGGGTCTAGGAAATTAGCAATAGGAAAATaGATTCTGCTTGTTTGTCCC +
Preference number: 4 (lower is better)
Translates to: EPHAYHPAVLSGPCGSRKLAIGK*ILLVCP
Trigger: GGGACAAACAAGCAGAATTCATTTTCCTATTGCTAA...TTTCCTAGACCCACAAGGGCCAGACAGGACAGCTGGGTGGTAGGCATGAGGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544053.5
CDS-3UTR GCA 90 bp AAATTAGAGGTGTCTGGGCTCTCATGTCTGCACTGGTTTGTGTGGCCACGCTGTGTTATAAGTTTCCTCTaGTGGTGTACTGGGGTGTGT +
Preference number: 4 (lower is better)
Translates to: KLEVSGLSCLHWFVWPRCVISFL*WCTGVC
Trigger: ACACACCCCAGTACACCAGCAGAGGAAACTTATAAC...ACAGCGTGGCCACACAAACCAGTGCAGACATGAGAGCCCAGACACCTCTAATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544053.5
CDS-3UTR GCA 90 bp GGTCAGAAGGGCAGGATGGCTTCCAGGCTTAGCGTATTCAGCACAAAGACAGTAGACAGTATCTGCTCTTaGCAGAACTTGTACCGCTAT +
Preference number: 4 (lower is better)
Translates to: GQKGRMASRLSVFSTKTVDSICS*QNLYRY
Trigger: ATAGCGGTACAAGTTCTGGCAAGAGCAGATACTGTC...TACTGTCTTTGTGCTGAATACGCTAAGCCTGGAAGCCATCCTGCCCTTCTGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256951.10
ENST00000431267.2
CDS-3UTR GCA 90 bp GAGCATCAAAGTACTAGCCAACTACTTTCTCCCCAGGGCAGGGGCTTGGCAGTACACAAAGACAGTATCTaGTCTTGCCAGAACTTGTAC +
Preference number: 4 (lower is better)
Translates to: EHQSTSQLLSPQGRGLAVHKDSI*SCQNLY
Trigger: GTACAAGTTCTGGCAAGAGCAGATACTGTCTTTGTG...TACTGCCAAGCCCCTGCCCTGGGGAGAAAGTAGTTGGCTAGTACTTTGATGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256951.10
ENST00000431267.2
CDS-3UTR GCA 90 bp AGGATGGCTTCCAGGCTTAGCGTATTCAGCACAAAGACAGTATCTGCTCTTGCCAAACTCCAGAAGAGCTaGCTTGGCTTTCAGCAAGAG +
Preference number: 4 (lower is better)
Translates to: RMASRLSVFSTKTVSALAKLQKS*LGFQQE
Trigger: CTCTTGCTGAAAGCCAAGGCAGCTCTTCTGGAGTTT...GGCAAGAGCAGATACTGTCTTTGTGCTGAATACGCTAAGCCTGGAAGCCATCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR GCA 90 bp AGACTGGAATGTGATGTTTTGCTTTGGGTCAGAAGGGCAGGATGGCTTCCAGGCGACAAAAGTTCCCTCTaGAGAAGGGATGGAAGGATA +
Preference number: 4 (lower is better)
Translates to: RLECDVLLWVRRAGWLPGDKSSL*RRDGRI
Trigger: TATCCTTCCATCCCTTCTGCAGAGGGAACTTTTGTC...GCCTGGAAGCCATCCTGCCCTTCTGACCCAAAGCAAAACATCACATTCCAGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR CCA 90 bp AATCTATTAACGAAGAAGCCCAATACAGTACTAGAACAATCCACCAGAGTAATGCAGAGGCGCTCTGAGTaGCAGGTGCTGGCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: NLLTKKPNTVLEQSTRVMQRRSE*QVLAAA
Trigger: GGCTGCTGCCAGCACCTGCCACTCAGAGCGCCTCTG...CATTACTCTGGTGGATTGTTCTAGTACTGTATTGGGCTTCTTCGTTAATAGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR CCA 90 bp CCTCCCCTATCTCGGTTTTTCCTGTACAGCAACCTCCACTTCCCTCCCAGATTCATGCATCTACCGTATTaGAAACCAACCAGACATTGG +
Preference number: 4 (lower is better)
Translates to: PPLSRFFLYSNLHFPPRFMHLPY*KPTRHW
Trigger: CCAATGTCTGGTTGGTTTCCAATACGGTAGATGCAT...GAATCTGGGAGGGAAGTGGAGGTTGCTGTACAGGAAAAACCGAGATAGGGGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000256951.10
ENST00000396301.7
CDS-3UTR CCA 90 bp CAGGGCAGGGGCTTGGCAGTAGAGAATCCCCTCAGTAATGGTTTGGGATTTGACCAAAGGAATGGCATTTaGGACAAAGTGATGTTGGCA +
Preference number: 4 (lower is better)
Translates to: QGRGLAVENPLSNGLGFDQRNGI*DKVMLA
Trigger: TGCCAACATCACTTTGTCCCAAATGCCATTCCTTTG...GTCAAATCCCAAACCATTACTGAGGGGATTCTCTACTGCCAAGCCCCTGCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR CCA 90 bp TGGCTTCCAGGCTTAGCGTATTCAGCACAAAGACAGTATCTGCTCTTGCCAGAAAAGTCCACACTGAGGTaGTCTCAGAAGGAGATGAGG +
Preference number: 4 (lower is better)
Translates to: WLPGLAYSAQRQYLLLPEKSTLR*SQKEMR
Trigger: CCTCATCTCCTTCTGAGACCACCTCAGTGTGGACTT...TTCTGGCAAGAGCAGATACTGTCTTTGTGCTGAATACGCTAAGCCTGGAAGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR CCA 90 bp TGTGATGTTTTGCTTTGGGTCAGAAGGGCAGGATGGCTTCCAGGCTTAGCGTATGAGGTTGGAAGAGTTTaGAGGGCTCAGAAGAAGACA +
Preference number: 4 (lower is better)
Translates to: CDVLLWVRRAGWLPGLAYEVGRV*RAQKKT
Trigger: TGTCTTCTTCTGAGCCCTCCAAACTCTTCCAACCTC...ATACGCTAAGCCTGGAAGCCATCCTGCCCTTCTGACCCAAAGCAAAACATCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256951.10
3UTR CAA 72 bp CATAACCCTAACATGGCACTGTTGCAAGACTGCCCCTaGGATCCCATAGTTTGTGTGGTACTTTTACCACCG +
Preference number: 4 (lower is better)
Translates to: HNPNMALLQDCP*DPIVCVVLLPP
Trigger: CGGTGGTAAAAGTACCACACAAACTATGGGATCCAAGGGGCAGTCTTGCAACAGTGCCATGTTAGGGTTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256951.10
3UTR CAA 72 bp ACAAAGCCACGTAAGACTCCAAAACCCCGCCTTCCCTaGGGCTCCACACAATCAGCATACATCTTTCCTTAT +
Preference number: 4 (lower is better)
Translates to: TKPRKTPKPRLP*GSTQSAYIFPY
Trigger: ATAAGGAAAGATGTATGCTGATTGTGTGGAGCCCAAGGGAAGGCGGGGTTTTGGAGTCTTACGTGGCTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256951.10
3UTR CAA 72 bp CTTTGGAACTGGGTAACGGGTAGAGGTTGGAAGAGTTaGGAGGGCTCAGAAGAAGACAGGAAGATGAAGGAA +
Preference number: 4 (lower is better)
Translates to: LWNWVTGRGWKS*EGSEEDRKMKE
Trigger: TTCCTTCATCTTCCTGTCTTCTTCTGAGCCCTCCAAACTCTTCCAACCTCTACCCGTTACCCAGTTCCAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR TCA 90 bp TGTTTTGCTTTGGGTCAGAAGGGCAGGATGGCTTCCAGGCTTAGCGTATTCAGCTTTCCAAAGACCTACTaGTGCATCTACCGTATTGGA +
Preference number: 4 (lower is better)
Translates to: CFALGQKGRMASRLSVFSFPKTY*CIYRIG
Trigger: TCCAATACGGTAGATGCATCAGTAGGTCTTTGGAAA...GCTGAATACGCTAAGCCTGGAAGCCATCCTGCCCTTCTGACCCAAAGCAAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR TCA 90 bp CCAGGCTTAGCGTATTCAGCACAAAGACAGTATCTGCTCTTGCCAGAACTTGTATTCCCTTCTCCATGGTaGAGAGCTGGAACACGAAGA +
Preference number: 4 (lower is better)
Translates to: PGLAYSAQRQYLLLPELVFPSPW*RAGTRR
Trigger: TCTTCGTGTTCCAGCTCTTCACCATGGAGAAGGGAA...TACAAGTTCTGGCAAGAGCAGATACTGTCTTTGTGCTGAATACGCTAAGCCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256951.10
ENST00000431267.2
CDS-3UTR TCA 90 bp GAGTCTGACAAAAGTTCCCTCTGCAGAAGGGATGGAAGGATAGCCTTGGGGGTTGATACATCTTTAAAGTaGGTCACCCCTCCTCACAAT +
Preference number: 4 (lower is better)
Translates to: ESDKSSLCRRDGRIALGVDTSLK*VTPPHN
Trigger: ATTGTGAGGAGGGGTGACTCACTTTAAAGATGTATC...AACCCCCAAGGCTATCCTTCCATCCCTTCTGCAGAGGGAACTTTTGTCAGACTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR TCA 90 bp GCAGGATGGCTTCCAGGCTTAGCGTATTCAGCACAAAGACAGTATCTGCTCTTGATCAATTATAGGTCTTaGTGGTCATGTCCCCAGCCT +
Preference number: 4 (lower is better)
Translates to: AGWLPGLAYSAQRQYLLLINYRS*WSCPQP
Trigger: AGGCTGGGGACATGACCATCAAGACCTATAATTGAT...CAAGAGCAGATACTGTCTTTGTGCTGAATACGCTAAGCCTGGAAGCCATCCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR TCA 90 bp CAGGGCAGGGGCTTGGCAGTAGAGAATCCCCTCAGTAATGGTTTGGGATTTGACGCATTTGGGACAAAGTaGTGTTGGCAAGTAAGAAAT +
Preference number: 4 (lower is better)
Translates to: QGRGLAVENPLSNGLGFDAFGTK*CWQVRN
Trigger: ATTTCTTACTTGCCAACATCACTTTGTCCCAAATGC...GTCAAATCCCAAACCATTACTGAGGGGATTCTCTACTGCCAAGCCCCTGCCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR TCA 90 bp AAGCTACTCAGGGATGCAAAAGAGCATGTCCTTCCACCAAACCGAGTATATTGGTGTGTGGCCACGCTGTaGTGTAAAACACAGAACCTC +
Preference number: 4 (lower is better)
Translates to: KLLRDAKEHVLPPNRVYWCVATL*CKTQNL
Trigger: GAGGTTCTGTGTTTTACATCACAGCGTGGCCACACA...CCAATATACTCGGTTTGGTGGAAGGACATGCTCTTTTGCATCCCTGAGTAGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544053.5
CDS-3UTR GCA 90 bp GGCACTTCAGACTGGAATGTGATGTTTTGCTTTGGGTCAGAAGGGCAGGATGGCCACGACACAAGGATATaGAGTCTTTATCCAGTCCTT +
Preference number: 4 (lower is better)
Translates to: GTSDWNVMFCFGSEGQDGHDTRI*SLYPVL
Trigger: AAGGACTGGATAAAGACTGCATATCCTTGTGTCGTG...GCCATCCTGCCCTTCTGACCCAAAGCAAAACATCACATTCCAGTCTGAAGTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR GCA 90 bp TGTGATGTTTTGCTTTGGGTCAGAAGGGCAGGATGGCTTCCAGGCTTAGCGTATGACTTTGGGCTTGCCTaGCTTCAAAATCATGTGAGT +
Preference number: 4 (lower is better)
Translates to: CDVLLWVRRAGWLPGLAYDFGLA*LQNHVS
Trigger: ACTCACATGATTTTGAAGGCAGGCAAGCCCAAAGTC...ATACGCTAAGCCTGGAAGCCATCCTGCCCTTCTGACCCAAAGCAAAACATCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR CCA 90 bp AGGATGGCTTCCAGGCTTAGCGTATTCAGCACAAAGACAGTATCTGCTCTTGCCATAACAGTAGCGATGTaGACCACAAAGATACCAGCC +
Preference number: 4 (lower is better)
Translates to: RMASRLSVFSTKTVSALAITVAM*TTKIPA
Trigger: GGCTGGTATCTTTGTGGTCCACATCGCTACTGTTAT...GGCAAGAGCAGATACTGTCTTTGTGCTGAATACGCTAAGCCTGGAAGCCATCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR CCA 90 bp ATTCAGCACAAAGACAGTATCTGCTCTTGCCAGAACTTGTACCGCTATTTTAACGCCTCACCTGTGAAGTaGGATAGGCAGGGTCCCCAA +
Preference number: 4 (lower is better)
Translates to: IQHKDSICSCQNLYRYFNASPVK*DRQGPQ
Trigger: TTGGGGACCCTGCCTATCCCACTTCACAGGTGAGGC...GTTAAAATAGCGGTACAAGTTCTGGCAAGAGCAGATACTGTCTTTGTGCTGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR CCA 90 bp TCCCTCTGCAGAAGGGATGGAAGGATAGCCTTGGGGGTTGATTTAGGACTGGGTATTTTCGTATTTTCCTaGGAATGCAGGCACTCTGTT +
Preference number: 4 (lower is better)
Translates to: SLCRRDGRIALGVDLGLGIFVFS*ECRHSV
Trigger: AACAGAGTGCCTGCATTCCCAGGAAAATACGAAAAT...ACCCAGTCCTAAATCAACCCCCAAGGCTATCCTTCCATCCCTTCTGCAGAGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR CCA 90 bp GCAGTCTTTATCCAGTCCTTATTGCTCACAGAAAGATACCAGTCCTTACTGCTCATGCCTGAAAGCCGGTaGGGTTTTACACAGGGACTG +
Preference number: 4 (lower is better)
Translates to: AVFIQSLLLTERYQSLLLMPESR*GFTQGL
Trigger: CAGTCCCTGTGTAAAACCCCACCGGCTTTCAGGCAT...GAGCAGTAAGGACTGGTATCTTTCTGTGAGCAATAAGGACTGGATAAAGACTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR CCA 90 bp GAGTCTGACAAAAGTTCCCTCTGCAGAAGGGATGGAAGGATAGCCTTGGGGGTTAAAGCTGGAAGAAGATaGGACACATGTCTGCTTCAT +
Preference number: 4 (lower is better)
Translates to: ESDKSSLCRRDGRIALGVKAGRR*DTCLLH
Trigger: ATGAAGCAGACATGTGTCCCATCTTCTTCCAGCTTT...AACCCCCAAGGCTATCCTTCCATCCCTTCTGCAGAGGGAACTTTTGTCAGACTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR CCA 90 bp ACTAACAGATATGCACTGCCACTTGGTAGCTACCCAGGAGCACTGGTTTTGAACCTGCACTGGTTTGTGTaGCCACGCTGTGATGTAAAA +
Preference number: 4 (lower is better)
Translates to: TNRYALPLGSYPGALVLNLHWFV*PRCDVK
Trigger: TTTTACATCACAGCGTGGCCACACAAACCAGTGCAG...GTTCAAAACCAGTGCTCCTGGGTAGCTACCAAGTGGCAGTGCATATCTGTTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544053.5
CDS-3UTR TCA 90 bp CCTTTCTGCCTTCTTGAAGTGTCTTGTACACACGTGCTACTAACAGATATGCACTTCCCTTCTCCATGGTaGAGAGCTGGAACACGAAGA +
Preference number: 4 (lower is better)
Translates to: PFCLLEVSCTHVLLTDMHFPSPW*RAGTRR
Trigger: TCTTCGTGTTCCAGCTCTTCACCATGGAGAAGGGAA...GTGCATATCTGTTAGTAGCACGTGTGTACAAGACACTTCAAGAAGGCAGAAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544053.5
CDS-3UTR TCA 90 bp TCTCCTGTTGTATACTTAAAAGAAACACTGACTGCATTGAGGGGAATCCTAAAACAGTGTGGTGGCCCCTaGGAGGAAGAACCGGTTTCC +
Preference number: 4 (lower is better)
Translates to: SPVVYLKETLTALRGILKQCGGP*EEEPVS
Trigger: GGAAACCGGTTCTTCCTCTCAGGGGCCACCACACTG...TTTTAGGATTCCCCTCAATGCAGTCAGTGTTTCTTTTAAGTATACAACAGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR TCA 90 bp ACTTTTCAGCCTCCATTGTGTATTTTTGGTGCAATACTCTGTGCAACTATTTCAGGCATGAGGTCTCCATaGGGGACAGCCGTGTGTGAG +
Preference number: 4 (lower is better)
Translates to: TFQPPLCIFGAILCATISGMRSP*GTAVCE
Trigger: CTCACACACGGCTGTCCCTCATGGAGACCTCATGCC...TGAAATAGTTGCACAGAGTATTGCACCAAAAATACACAATGGAGGCTGAAAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR TCA 90 bp CCCCATTCACCATCCAGGCTTTTGAGGAGAAAGATACCAATCTTAGCAGCAGAGCAATTGCTCATGGCATaGGATAGGGTCATGAGGAAA +
Preference number: 4 (lower is better)
Translates to: PHSPSRLLRRKIPILAAEQLLMA*DRVMRK
Trigger: TTTCCTCATGACCCTATCTCATGCCATGAGCAATTG...CTCTGCTGCTAAGATTGGTATCTTTCTCCTCAAAAGCCTGGATGGTGAATGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR TCA 90 bp GCCGTGGTGATACTGCGTTCCATCACGATTCGCATAATGACTAGTGTAGATGGAACCTTTCTGCCTTCTTaGAGTGTCTTGTACACACGT +
Preference number: 4 (lower is better)
Translates to: AVVILRSITIRIMTSVDGTFLPS*SVLYTR
Trigger: ACGTGTGTACAAGACACTTCAAGAAGGCAGAAAGGT...TCCATCTACACTAGTCATTATGCGAATCGTGATGGAACGCAGTATCACCACGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544053.5
CDS-3UTR GCA 90 bp ATGTGTGTTTTAATCAGCTTCCAGAATTGCCATGCCTCACCTGTGAAGTGGGATGCACTGTTGCAAGACTaGCCCTTGGATCCCATAGTT +
Preference number: 4 (lower is better)
Translates to: MCVLISFQNCHASPVKWDALLQD*PLDPIV
Trigger: AACTATGGGATCCAAGGGGCAGTCTTGCAACAGTGC...ATCCCACTTCACAGGTGAGGCATGGCAATTCTGGAAGCTGATTAAAACACACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR GCA 90 bp GAAAGCTACTCAGGGATGCAAAAGAGCATGTCCTTCCACCAAACCGAGTATATTAAACACAGAACCTCATaGCTACCACCCAGCTGTCCT +
Preference number: 4 (lower is better)
Translates to: ESYSGMQKSMSFHQTEYIKHRTS*LPPSCP
Trigger: AGGACAGCTGGGTGGTAGGCATGAGGTTCTGTGTTT...AATATACTCGGTTTGGTGGAAGGACATGCTCTTTTGCATCCCTGAGTAGCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544053.5
CDS-3UTR CCA 90 bp AGGATGGCTTCCAGGCTTAGCGTATTCAGCACAAAGACAGTATCTGCTCTTGCCGTTATCATTTGCCTTTaGGTCCCATTCTTGAGTGGT +
Preference number: 4 (lower is better)
Translates to: RMASRLSVFSTKTVSALAVIICL*VPFLSG
Trigger: ACCACTCAAGAATGGGACCCAAAGGCAAATGATAAC...GGCAAGAGCAGATACTGTCTTTGTGCTGAATACGCTAAGCCTGGAAGCCATCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256951.10
3UTR CAA 72 bp GGCACTGTTGCAAGACTGCCCCTTGGATCCCATAGTTaGTGTGGTACTTTTACCACCGAATTGTTCACTAGT +
Preference number: 4 (lower is better)
Translates to: GTVARLPLGSHS*CGTFTTELFTS
Trigger: ACTAGTGAACAATTCGGTGGTAAAAGTACCACACAAACTATGGGATCCAAGGGGCAGTCTTGCAACAGTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256951.10
3UTR CAA 72 bp TTAGCAGCAGAGGACACTCTGGATAGAGCTAGGAGTTaGTTGCAGAGTCTGACAAAAGTTCCCTCTGCAGAA +
Preference number: 4 (lower is better)
Translates to: LAAEDTLDRARS*LQSLTKVPSAE
Trigger: TTCTGCAGAGGGAACTTTTGTCAGACTCTGCAACAAACTCCTAGCTCTATCCAGAGTGTCCTCTGCTGCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR TCA 90 bp ATGCAGTCTTTATCCAGTCCTTATTGCTCACAGAAAGATACCAGTCCTTACTGCATCTTCACTGGCATATaGCAGGCTGTCACTGCAGCT +
Preference number: 4 (lower is better)
Translates to: MQSLSSPYCSQKDTSPYCIFTGI*QAVTAA
Trigger: AGCTGCAGTGACAGCCTGTCATATGCCAGTGAAGAT...GCAGTAAGGACTGGTATCTTTCTGTGAGCAATAAGGACTGGATAAAGACTGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR TCA 90 bp GCAGTCTTTATCCAGTCCTTATTGCTCACAGAAAGATACCAGTCCTTACTGCTCGCTAACCCACCAGCATaGCCTTACAAACTCTCTTTC +
Preference number: 4 (lower is better)
Translates to: AVFIQSLLLTERYQSLLLANPPA*PYKLSF
Trigger: GAAAGAGAGTTTGTAAGGTCATGCTGGTGGGTTAGC...GAGCAGTAAGGACTGGTATCTTTCTGTGAGCAATAAGGACTGGATAAAGACTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR TCA 90 bp GCAGTCTTTATCCAGTCCTTATTGCTCACAGAAAGATACCAGTCCTTACTGCTCGTTTGTTGCAGAGTCTaGCAAAAGTTCCCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: AVFIQSLLLTERYQSLLLVCCRV*QKFPLQ
Trigger: CTGCAGAGGGAACTTTTGTCAGACTCTGCAACAAAC...GAGCAGTAAGGACTGGTATCTTTCTGTGAGCAATAAGGACTGGATAAAGACTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR GCA 90 bp GCAGGATGGCTTCCAGGCTTAGCGTATTCAGCACAAAGACAGTATCTGCTCTTGAGAGTAATAGGATTGTaGTACAATGAGCCATGTCCA +
Preference number: 4 (lower is better)
Translates to: AGWLPGLAYSAQRQYLLLRVIGL*YNEPCP
Trigger: TGGACATGGCTCATTGTAGCACAATCCTATTACTCT...CAAGAGCAGATACTGTCTTTGTGCTGAATACGCTAAGCCTGGAAGCCATCCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR GCA 90 bp GAGCATCAAAGTACTAGCCAACTACTTTCTCCCCAGGGCAGGGGCTTGGCAGTAAATAGGTGTGATGCATaGCTTTGTGAATCACTTTAT +
Preference number: 4 (lower is better)
Translates to: EHQSTSQLLSPQGRGLAVNRCDA*LCESLY
Trigger: ATAAAGTGATTCACAAAGGCATGCATCACACCTATT...TACTGCCAAGCCCCTGCCCTGGGGAGAAAGTAGTTGGCTAGTACTTTGATGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR CCA 90 bp CTCATTAGCAATAGGAAAATGAATTCTGCTTGTTTGTCCCTAAACAGGAGTTCTAGCACACCAGTGTGGTaGCCCCTGAGAGGAAGAACC +
Preference number: 4 (lower is better)
Translates to: LISNRKMNSACLSLNRSSSTPVW*PLRGRT
Trigger: GGTTCTTCCTCTCAGGGGCCACCACACTGGTGTGCT...AGAACTCCTGTTTAGGGACAAACAAGCAGAATTCATTTTCCTATTGCTAATGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544053.5
CDS-3UTR CCA 90 bp TGTGATGTTTTGCTTTGGGTCAGAAGGGCAGGATGGCTTCCAGGCTTAGCGTATACTCTGTTCTTATCATaGCTGAAATACGGTAGGCTT +
Preference number: 4 (lower is better)
Translates to: CDVLLWVRRAGWLPGLAYTLFLS*LKYGRL
Trigger: AAGCCTACCGTATTTCAGCCATGATAAGAACAGAGT...ATACGCTAAGCCTGGAAGCCATCCTGCCCTTCTGACCCAAAGCAAAACATCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR CCA 90 bp TCCCTCTGCAGAAGGGATGGAAGGATAGCCTTGGGGGTTGATTTAGGACTGGGTTGTGAGTATTCCCTTTaGATATGTCTGAAATGTAAG +
Preference number: 4 (lower is better)
Translates to: SLCRRDGRIALGVDLGLGCEYSL*ICLKCK
Trigger: CTTACATTTCAGACATATCCAAAGGGAATACTCACA...ACCCAGTCCTAAATCAACCCCCAAGGCTATCCTTCCATCCCTTCTGCAGAGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR CCA 90 bp AAAAGTAGGCAAGATGTCTCAGATTCTCCCTGGGGTAGATCTTCTCAGGGCGATCCTGGAACAAAGGAATaGCATTTGGGACAAAGTGAT +
Preference number: 4 (lower is better)
Translates to: KSRQDVSDSPWGRSSQGDPGTKE*HLGQSD
Trigger: ATCACTTTGTCCCAAATGCCATTCCTTTGTTCCAGG...ATCGCCCTGAGAAGATCTACCCCAGGGAGAATCTGAGACATCTTGCCTACTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR CCA 90 bp TGGCTTCCAGGCTTAGCGTATTCAGCACAAAGACAGTATCTGCTCTTGCCAGAAATAAGTTTCCTCTGCTaGTGTACTGGGGTGTGTAAT +
Preference number: 4 (lower is better)
Translates to: WLPGLAYSAQRQYLLLPEISFLC*CTGVCN
Trigger: ATTACACACCCCAGTACACCAGCAGAGGAAACTTAT...TTCTGGCAAGAGCAGATACTGTCTTTGTGCTGAATACGCTAAGCCTGGAAGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431267.2
CDS-3UTR CCA 90 bp CTCATTAGCAATAGGAAAATGAATTCTGCTTGTTTGTCCCTAAACAGGAGTTCTCACAGCACACCAGTGTaGTGGCCCCTGAGAGGAAGA +
Preference number: 4 (lower is better)
Translates to: LISNRKMNSACLSLNRSSHSTPV*WPLRGR
Trigger: TCTTCCTCTCAGGGGCCACCACACTGGTGTGCTGTG...AGAACTCCTGTTTAGGGACAAACAAGCAGAATTCATTTTCCTATTGCTAATGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544053.5
CDS-3UTR CCA 90 bp AAATTAGAGGTGTCTGGGCTCTCATGTCTGCACTGGTTTGTGTGGCCACGCTGTCTTAAAAGTGTAAACTaGAGTCTACCCATGAGATAC +
Preference number: 4 (lower is better)
Translates to: KLEVSGLSCLHWFVWPRCLKSVN*SLPMRY
Trigger: GTATCTCATGGGTAGACTCCAGTTTACACTTTTAAG...ACAGCGTGGCCACACAAACCAGTGCAGACATGAGAGCCCAGACACCTCTAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544053.5
CDS-3UTR CCA 90 bp CCCTCCCCTATCTCGGTTTTTCCTGTACAGCAACCTCCACTTCCCTCCCAGATTCCAAACCGAGTATATTaGGAAAGAACAACAATTAAG +
Preference number: 4 (lower is better)
Translates to: PSPISVFPVQQPPLPSQIPNRVY*ERTTIK
Trigger: CTTAATTGTTGTTCTTTCCCAATATACTCGGTTTGG...AATCTGGGAGGGAAGTGGAGGTTGCTGTACAGGAAAAACCGAGATAGGGGAGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000544053.5
3UTR CAA 72 bp ACACTGAGGTGGTCTCAGAAGGAGATGAGGAACTTATaGGGAACTGGAGTTGCCAATAGATCAGCAGTTAAC +
Preference number: 4 (lower is better)
Translates to: TLRWSQKEMRNL*GTGVANRSAVN
Trigger: GTTAACTGCTGATCTATTGGCAACTCCAGTTCCCAATAAGTTCCTCATCTCCTTCTGAGACCACCTCAGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR TCA 90 bp AGGATGGCTTCCAGGCTTAGCGTATTCAGCACAAAGACAGTATCTGCTCTTGCCGTGTCTACCTCCAAATaGTACATCTTTAAAGTGAGT +
Preference number: 4 (lower is better)
Translates to: RMASRLSVFSTKTVSALAVSTSK*YIFKVS
Trigger: ACTCACTTTAAAGATGTATCATTTGGAGGTAGACAC...GGCAAGAGCAGATACTGTCTTTGTGCTGAATACGCTAAGCCTGGAAGCCATCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR TCA 90 bp TGTGATGTTTTGCTTTGGGTCAGAAGGGCAGGATGGCTTCCAGGCTTAGCGTATTGCTATAAAGATACTTaGAAGTGTGGAAGCACCTTT +
Preference number: 4 (lower is better)
Translates to: CDVLLWVRRAGWLPGLAYCYKDT*KCGSTF
Trigger: AAAGGTGCTTCCACACTTTCAAGTATCTTTATAGCA...ATACGCTAAGCCTGGAAGCCATCCTGCCCTTCTGACCCAAAGCAAAACATCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR TCA 90 bp CCCCATTCACCATCCAGGCTTTTGAGGAGAAAGATACCAATCTTAGCAGCAGAGGTAGACAGTCATTTTTaGATCAGGGCTCACTTTGTT +
Preference number: 4 (lower is better)
Translates to: PHSPSRLLRRKIPILAAEVDSHF*IRAHFV
Trigger: AACAAAGTGAGCCCTGATTCAAAAATGACTGTCTAC...CTCTGCTGCTAAGATTGGTATCTTTCTCCTCAAAAGCCTGGATGGTGAATGGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR TCA 90 bp CTCATTAGCAATAGGAAAATGAATTCTGCTTGTTTGTCCCTAAACAGGAGTTCTCCTAAACAGGAGTTCTaGTGGATGTCCCCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: LISNRKMNSACLSLNRSSPKQEF*WMSPGP
Trigger: TGGCCCAGGGGACATCCATCAGAACTCCTGTTTAGG...AGAACTCCTGTTTAGGGACAAACAAGCAGAATTCATTTTCCTATTGCTAATGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544053.5
CDS-3UTR GCA 90 bp TGCCCCTTGGATCCCATAGTTTGTGTGGTACTTTTACCACCGAATTGTTCACTAGTTATAAGTTTCCTCTaGTGGTGTACTGGGGTGTGT +
Preference number: 4 (lower is better)
Translates to: CPLDPIVCVVLLPPNCSLVISFL*WCTGVC
Trigger: ACACACCCCAGTACACCAGCAGAGGAAACTTATAAC...TAGTGAACAATTCGGTGGTAAAAGTACCACACAAACTATGGGATCCAAGGGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR GCA 90 bp GCAGTCTTTATCCAGTCCTTATTGCTCACAGAAAGATACCAGTCCTTACTGCTCGACAGTATCTGCTCTTaGCAGAACTTGTACCGCTAT +
Preference number: 4 (lower is better)
Translates to: AVFIQSLLLTERYQSLLLDSICS*QNLYRY
Trigger: ATAGCGGTACAAGTTCTGGCAAGAGCAGATACTGTC...GAGCAGTAAGGACTGGTATCTTTCTGTGAGCAATAAGGACTGGATAAAGACTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR GCA 90 bp AGGATGGCTTCCAGGCTTAGCGTATTCAGCACAAAGACAGTATCTGCTCTTGCCTTATCCAGTCCTTATTaGTCACAGAAAGATACCAGT +
Preference number: 4 (lower is better)
Translates to: RMASRLSVFSTKTVSALALSSPY*SQKDTS
Trigger: ACTGGTATCTTTCTGTGAGCAATAAGGACTGGATAA...GGCAAGAGCAGATACTGTCTTTGTGCTGAATACGCTAAGCCTGGAAGCCATCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR GCA 90 bp AAAAGTAGGCAAGATGTCTCAGATTCTCCCTGGGGTAGATCTTCTCAGGGCGATCTTTTGGTCTTCATATaGCTTCTTTCAAGGCCTTTG +
Preference number: 4 (lower is better)
Translates to: KSRQDVSDSPWGRSSQGDLLVFI*LLSRPL
Trigger: CAAAGGCCTTGAAAGAAGGCATATGAAGACCAAAAG...ATCGCCCTGAGAAGATCTACCCCAGGGAGAATCTGAGACATCTTGCCTACTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR CCA 90 bp ACTTTTCAGCCTCCATTGTGTATTTTTGGTGCAATACTCTGTGCAACTATTTCACCTGGTCCGCTCTTCTaGAAGTATGTGACCGCACTG +
Preference number: 4 (lower is better)
Translates to: TFQPPLCIFGAILCATISPGPLF*KYVTAL
Trigger: CAGTGCGGTCACATACTTCCAGAAGAGCGGACCAGG...TGAAATAGTTGCACAGAGTATTGCACCAAAAATACACAATGGAGGCTGAAAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR CCA 90 bp CCAGGCTTAGCGTATTCAGCACAAAGACAGTATCTGCTCTTGCCAGAACTTGTACTAAATGAGGGGAGGTaGACCCCTTATGATAGTTTA +
Preference number: 4 (lower is better)
Translates to: PGLAYSAQRQYLLLPELVLNEGR*TPYDSL
Trigger: TAAACTATCATAAGGGGTCCACCTCCCCTCATTTAG...TACAAGTTCTGGCAAGAGCAGATACTGTCTTTGTGCTGAATACGCTAAGCCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR CCA 90 bp GTGGTGATACTGCGTTCCATCACGATTCGCATAATGACTAGTGTAGATGGACACTGTGCATTGTGGCAGTaGTTTCATCTTTCTGAGAAC +
Preference number: 4 (lower is better)
Translates to: VVILRSITIRIMTSVDGHCALWQ*FHLSEN
Trigger: GTTCTCAGAAAGATGAAACCACTGCCACAATGCACA...GTGTCCATCTACACTAGTCATTATGCGAATCGTGATGGAACGCAGTATCACCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544053.5
CDS-3UTR TCA 90 bp CTGCTTCACATTAAAACCCTCCTTATTGTATTGGTGCTGACACGACACAAGGATTTCTCTGGAGAATTCTaGCTAATGCACCCCCATTCA +
Preference number: 4 (lower is better)
Translates to: LLHIKTLLIVLVLTRHKDFSGEF*LMHPHS
Trigger: TGAATGGGGGTGCATTAGTCAGAATTCTCCAGAGAA...ATCCTTGTGTCGTGTCAGCACCAATACAATAAGGAGGGTTTTAATGTGAAGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR GCA 90 bp TTGGATCCCATAGTTTGTGTGGTACTTTTACCACCGAATTGTTCACTAGTGACTATCAGCTTCCAGAATTaGCATGCCTCACCTGTGAAG +
Preference number: 4 (lower is better)
Translates to: LDPIVCVVLLPPNCSLVTISFQN*HASPVK
Trigger: CTTCACAGGTGAGGCATGGCAATTCTGGAAGCTGAT...AGTCACTAGTGAACAATTCGGTGGTAAAAGTACCACACAAACTATGGGATCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR CCA 90 bp CTCATTAGCAATAGGAAAATGAATTCTGCTTGTTTGTCCCTAAACAGGAGTTCTTCCATGGTGAAGAGCTaGAACACGAAGACCAGGAGG +
Preference number: 4 (lower is better)
Translates to: LISNRKMNSACLSLNRSSSMVKS*NTKTRR
Trigger: CCTCCTGGTCTTCGTGTTCCAGCTCTTCACCATGGA...AGAACTCCTGTTTAGGGACAAACAAGCAGAATTCATTTTCCTATTGCTAATGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544053.5
CDS-3UTR CCA 90 bp CCCCATTCACCATCCAGGCTTTTGAGGAGAAAGATACCAATCTTAGCAGCAGAGAAATCCAAGGCAGAGTaGGATCTTTATCTATTAACC +
Preference number: 4 (lower is better)
Translates to: PHSPSRLLRRKIPILAAEKSKAE*DLYLLT
Trigger: GGTTAATAGATAAAGATCCCACTCTGCCTTGGATTT...CTCTGCTGCTAAGATTGGTATCTTTCTCCTCAAAAGCCTGGATGGTGAATGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256951.10
3UTR CAA 72 bp ACGACACAAGGATATGCAGTCTTTATCCAGTCCTTATaGCTCACAGAAAGATACCAGTCCTTACTGCTCACA +
Preference number: 4 (lower is better)
Translates to: TTQGYAVFIQSL*LTERYQSLLLT
Trigger: TGTGAGCAGTAAGGACTGGTATCTTTCTGTGAGCAATAAGGACTGGATAAAGACTGCATATCCTTGTGTCGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR TCA 90 bp AATCTATTAACGAAGAAGCCCAATACAGTACTAGAACAATCCACCAGAGTAATGGATAGCCTTGGGGGTTaGTTTAGGACTGGGTGTATG +
Preference number: 4 (lower is better)
Translates to: NLLTKKPNTVLEQSTRVMDSLGG*FRTGCM
Trigger: CATACACCCAGTCCTAAATCAACCCCCAAGGCTATC...CATTACTCTGGTGGATTGTTCTAGTACTGTATTGGGCTTCTTCGTTAATAGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR TCA 90 bp ATGCAGTCTTTATCCAGTCCTTATTGCTCACAGAAAGATACCAGTCCTTACTGCAAGAAGACAGGAAGATaGAGGAAAGTTTGGAGCTTC +
Preference number: 4 (lower is better)
Translates to: MQSLSSPYCSQKDTSPYCKKTGR*RKVWSF
Trigger: GAAGCTCCAAACTTTCCTTCATCTTCCTGTCTTCTT...GCAGTAAGGACTGGTATCTTTCTGTGAGCAATAAGGACTGGATAAAGACTGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR GCA 90 bp ATGCAGTCTTTATCCAGTCCTTATTGCTCACAGAAAGATACCAGTCCTTACTGCGGGCAAAGCAATGCCTaGTTAACCAGGAATAACATA +
Preference number: 4 (lower is better)
Translates to: MQSLSSPYCSQKDTSPYCGQSNA*LTRNNI
Trigger: TATGTTATTCCTGGTTAAGCAGGCATTGCTTTGCCC...GCAGTAAGGACTGGTATCTTTCTGTGAGCAATAAGGACTGGATAAAGACTGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR GCA 90 bp TGGTTTATGTGTGTTTTAATCAGCTTCCAGAATTGCCATGCCTCACCTGTGAAGGATACCAGTCCTTACTaGTCACAGAAAGTAGTGAAG +
Preference number: 4 (lower is better)
Translates to: WFMCVLISFQNCHASPVKDTSPY*SQKVVK
Trigger: CTTCACTACTTTCTGTGAGCAGTAAGGACTGGTATC...CTTCACAGGTGAGGCATGGCAATTCTGGAAGCTGATTAAAACACACATAAACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR GCA 90 bp GAAGAAGCCCAATACAGTACTAGAACAATCCACCAGAGTAATGCAAATTACATGGGCTGGAAGATTGCCTaGTTCACATTAAAACCCTCC +
Preference number: 4 (lower is better)
Translates to: EEAQYSTRTIHQSNANYMGWKIA*FTLKPS
Trigger: GGAGGGTTTTAATGTGAAGCAGGCAATCTTCCAGCC...CATGTAATTTGCATTACTCTGGTGGATTGTTCTAGTACTGTATTGGGCTTCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR GCA 90 bp ATGGTTTTAACCAAAATGCTGACAGTGATGTGGACGATTAAGTCCACACTGAGGGATGGGACACATGTCTaGTTCATTTTCTATTTCCCC +
Preference number: 4 (lower is better)
Translates to: MVLTKMLTVMWTIKSTLRDGTHV*FIFYFP
Trigger: GGGGAAATAGAAAATGAAGCAGACATGTGTCCCATC...CCTCAGTGTGGACTTAATCGTCCACATCACTGTCAGCATTTTGGTTAAAACCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR GCA 90 bp AAGCTACTCAGGGATGCAAAAGAGCATGTCCTTCCACCAAACCGAGTATATTGGATCACAATAATGATGTaGATTGTGGCAGTGGTTTCA +
Preference number: 4 (lower is better)
Translates to: KLLRDAKEHVLPPNRVYWITIMM*IVAVVS
Trigger: TGAAACCACTGCCACAATGCACATCATTATTGTGAT...CCAATATACTCGGTTTGGTGGAAGGACATGCTCTTTTGCATCCCTGAGTAGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544053.5
CDS-3UTR CCA 90 bp AGTACTAGAACAATCCACCAGAGTAATGCAAATTACATGAGACATAAATGTCACTCCATGGTGAAGAGCTaGAACACGAAGACCAGGAGG +
Preference number: 4 (lower is better)
Translates to: STRTIHQSNANYMRHKCHSMVKS*NTKTRR
Trigger: CCTCCTGGTCTTCGTGTTCCAGCTCTTCACCATGGA...GTGACATTTATGTCTCATGTAATTTGCATTACTCTGGTGGATTGTTCTAGTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR CCA 90 bp GCAGTCTTTATCCAGTCCTTATTGCTCACAGAAAGATACCAGTCCTTACTGCTCAGACAGAATCTGAGATaGCTTAAAATAGCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: AVFIQSLLLTERYQSLLLRQNLR*LKIAAP
Trigger: TGGAGCAGCTATTTTAAGCCATCTCAGATTCTGTCT...GAGCAGTAAGGACTGGTATCTTTCTGTGAGCAATAAGGACTGGATAAAGACTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256951.10
3UTR CAA 72 bp GGATCCCATAGTTTGTGTGGTACTTTTACCACCGAATaGTTCACTAGTGACTTTAGAGAAACTCCAGAAGAG +
Preference number: 4 (lower is better)
Translates to: GSHSLCGTFTTE*FTSDFRETPEE
Trigger: CTCTTCTGGAGTTTCTCTAAAGTCACTAGTGAACAATTCGGTGGTAAAAGTACCACACAAACTATGGGATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256951.10
3UTR CAA 72 bp GATTGCCTGCTTCACATTAAAACCCTCCTTATTGTATaGGTGCTGACACGACACAAGGATATGCAGTCTTTA +
Preference number: 4 (lower is better)
Translates to: DCLLHIKTLLIV*VLTRHKDMQSL
Trigger: TAAAGACTGCATATCCTTGTGTCGTGTCAGCACCAATACAATAAGGAGGGTTTTAATGTGAAGCAGGCAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR TCA 90 bp TCTCCTGTTGTATACTTAAAAGAAACACTGACTGCATTGAGGGGAATCCTAAAAAGCTCGTCTACCATCTaGCTAGGTACCACAAGAGTT +
Preference number: 4 (lower is better)
Translates to: SPVVYLKETLTALRGILKSSSTI*LGTTRV
Trigger: AACTCTTGTGGTACCTAGTCAGATGGTAGACGAGCT...TTTTAGGATTCCCCTCAATGCAGTCAGTGTTTCTTTTAAGTATACAACAGGAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR GCA 90 bp TTGGATCCCATAGTTTGTGTGGTACTTTTACCACCGAATTGTTCACTAGTGACTGTATTTTCCTGGGAATaGAGGCACTCTGTTCTTATC +
Preference number: 4 (lower is better)
Translates to: LDPIVCVVLLPPNCSLVTVFSWE*RHSVLI
Trigger: GATAAGAACAGAGTGCCTGCATTCCCAGGAAAATAC...AGTCACTAGTGAACAATTCGGTGGTAAAAGTACCACACAAACTATGGGATCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR GCA 90 bp GAAGAAGCCCAATACAGTACTAGAACAATCCACCAGAGTAATGCAAATTACATGGAGCCCACACAGGTATaGCCTGGTTTATGTAATGAA +
Preference number: 4 (lower is better)
Translates to: EEAQYSTRTIHQSNANYMEPTQV*PGLCNE
Trigger: TTCATTACATAAACCAGGGCATACCTGTGTGGGCTC...CATGTAATTTGCATTACTCTGGTGGATTGTTCTAGTACTGTATTGGGCTTCTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR GCA 90 bp ATGGTTTTAACCAAAATGCTGACAGTGATGTGGACGATTAAGTCCACACTGAGGTCAAGTATGGAACCCTaGTCAATATCCTTTTGGTCT +
Preference number: 4 (lower is better)
Translates to: MVLTKMLTVMWTIKSTLRSSMEP*SISFWS
Trigger: AGACCAAAAGGATATTGAGCAGGGTTCCATACTTGA...CCTCAGTGTGGACTTAATCGTCCACATCACTGTCAGCATTTTGGTTAAAACCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR CCA 90 bp GAAGAAGCCCAATACAGTACTAGAACAATCCACCAGAGTAATGCAAATTACATGATAACAGTAGCGATGTaGACCACAAAGATACCAGCC +
Preference number: 4 (lower is better)
Translates to: EEAQYSTRTIHQSNANYMITVAM*TTKIPA
Trigger: GGCTGGTATCTTTGTGGTCCACATCGCTACTGTTAT...CATGTAATTTGCATTACTCTGGTGGATTGTTCTAGTACTGTATTGGGCTTCTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256951.10
ENST00000537612.1
CDS-3UTR CCA 90 bp TTGGATCCCATAGTTTGTGTGGTACTTTTACCACCGAATTGTTCACTAGTGACTATGCATCTACCGTATTaGAAACCAACCAGACATTGG +
Preference number: 4 (lower is better)
Translates to: LDPIVCVVLLPPNCSLVTMHLPY*KPTRHW
Trigger: CCAATGTCTGGTTGGTTTCCAATACGGTAGATGCAT...AGTCACTAGTGAACAATTCGGTGGTAAAAGTACCACACAAACTATGGGATCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR CCA 90 bp AGTACTAGAACAATCCACCAGAGTAATGCAAATTACATGAGACATAAATGTCACACCCCTTGCAGACTTTaGGCTTGCCTGCCTTCAAAA +
Preference number: 4 (lower is better)
Translates to: STRTIHQSNANYMRHKCHTPCRL*ACLPSK
Trigger: TTTTGAAGGCAGGCAAGCCCAAAGTCTGCAAGGGGT...GTGACATTTATGTCTCATGTAATTTGCATTACTCTGGTGGATTGTTCTAGTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR TCA 90 bp AATCTATTAACGAAGAAGCCCAATACAGTACTAGAACAATCCACCAGAGTAATGCCAGGTTTTCCATTGTaGAAAGGTCTCCTTCTTGGT +
Preference number: 4 (lower is better)
Translates to: NLLTKKPNTVLEQSTRVMPGFPL*KGLLLG
Trigger: ACCAAGAAGGAGACCTTTTCACAATGGAAAACCTGG...CATTACTCTGGTGGATTGTTCTAGTACTGTATTGGGCTTCTTCGTTAATAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR TCA 90 bp TGGTTTATGTGTGTTTTAATCAGCTTCCAGAATTGCCATGCCTCACCTGTGAAGTGTTCTTATCATGGCTaGAATACGGTAGGCTTAATA +
Preference number: 4 (lower is better)
Translates to: WFMCVLISFQNCHASPVKCSYHG*NTVGLI
Trigger: TATTAAGCCTACCGTATTTCAGCCATGATAAGAACA...CTTCACAGGTGAGGCATGGCAATTCTGGAAGCTGATTAAAACACACATAAACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR TCA 90 bp AATCTATTAACGAAGAAGCCCAATACAGTACTAGAACAATCCACCAGAGTAATGCACCATCCAGGCTTTTaGGGAGAAAGATACCAATCT +
Preference number: 4 (lower is better)
Translates to: NLLTKKPNTVLEQSTRVMHHPGF*GERYQS
Trigger: AGATTGGTATCTTTCTCCTCAAAAGCCTGGATGGTG...CATTACTCTGGTGGATTGTTCTAGTACTGTATTGGGCTTCTTCGTTAATAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR TCA 90 bp GAAGAAGCCCAATACAGTACTAGAACAATCCACCAGAGTAATGCAAATTACATGATCTGTTTTGTGCTCTaGAAATCGTGTCTACCTCCA +
Preference number: 4 (lower is better)
Translates to: EEAQYSTRTIHQSNANYMICFVL*KSCLPP
Trigger: TGGAGGTAGACACGATTTTCAGAGCACAAAACAGAT...CATGTAATTTGCATTACTCTGGTGGATTGTTCTAGTACTGTATTGGGCTTCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR GCA 90 bp ACGAAGAAGCCCAATACAGTACTAGAACAATCCACCAGAGTAATGCAAATTACACACAAAGACAGTATCTaGTCTTGCCAGAACTTGTAC +
Preference number: 4 (lower is better)
Translates to: TKKPNTVLEQSTRVMQITHKDSI*SCQNLY
Trigger: GTACAAGTTCTGGCAAGAGCAGATACTGTCTTTGTG...TGTAATTTGCATTACTCTGGTGGATTGTTCTAGTACTGTATTGGGCTTCTTCGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR GCA 90 bp AATCTATTAACGAAGAAGCCCAATACAGTACTAGAACAATCCACCAGAGTAATGTGGAATGTGATGTTTTaGTTTGGGTCAGAAGGGCAG +
Preference number: 4 (lower is better)
Translates to: NLLTKKPNTVLEQSTRVMWNVMF*FGSEGQ
Trigger: CTGCCCTTCTGACCCAAAGCAAAACATCACATTCCA...CATTACTCTGGTGGATTGTTCTAGTACTGTATTGGGCTTCTTCGTTAATAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR GCA 90 bp CTCATTAGCAATAGGAAAATGAATTCTGCTTGTTTGTCCCTAAACAGGAGTTCTAAAGCTACTCAGGGATaGAAAAGAGCATGTCCTTCC +
Preference number: 4 (lower is better)
Translates to: LISNRKMNSACLSLNRSSKATQG*KRACPS
Trigger: GGAAGGACATGCTCTTTTGCATCCCTGAGTAGCTTT...AGAACTCCTGTTTAGGGACAAACAAGCAGAATTCATTTTCCTATTGCTAATGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544053.5
CDS-3UTR CCA 90 bp ACGAAGAAGCCCAATACAGTACTAGAACAATCCACCAGAGTAATGCAAATTACAATGCATCTACCGTATTaGAAACCAACCAGACATTGG +
Preference number: 4 (lower is better)
Translates to: TKKPNTVLEQSTRVMQITMHLPY*KPTRHW
Trigger: CCAATGTCTGGTTGGTTTCCAATACGGTAGATGCAT...TGTAATTTGCATTACTCTGGTGGATTGTTCTAGTACTGTATTGGGCTTCTTCGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256951.10
ENST00000537612.1
CDS-3UTR CCA 90 bp AGTACTAGAACAATCCACCAGAGTAATGCAAATTACATGAGACATAAATGTCACTGTGATGTTTTGCTTTaGGTCAGAAGGGCAGGATGG +
Preference number: 4 (lower is better)
Translates to: STRTIHQSNANYMRHKCHCDVLL*VRRAGW
Trigger: CCATCCTGCCCTTCTGACCCAAAGCAAAACATCACA...GTGACATTTATGTCTCATGTAATTTGCATTACTCTGGTGGATTGTTCTAGTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR CCA 90 bp ACGAAGAAGCCCAATACAGTACTAGAACAATCCACCAGAGTAATGCAAATTACAAGATACTTGAAAGTGTaGAAGCACCTTTGGAACTGG +
Preference number: 4 (lower is better)
Translates to: TKKPNTVLEQSTRVMQITRYLKV*KHLWNW
Trigger: CCAGTTCCAAAGGTGCTTCCACACTTTCAAGTATCT...TGTAATTTGCATTACTCTGGTGGATTGTTCTAGTACTGTATTGGGCTTCTTCGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR CCA 90 bp CTGCTTCACATTAAAACCCTCCTTATTGTATTGGTGCTGACACGACACAAGGATAACACATTCCTATATTaGGAAGAGCTCAAAAGTCTG +
Preference number: 4 (lower is better)
Translates to: LLHIKTLLIVLVLTRHKDNTFLY*EELKSL
Trigger: CAGACTTTTGAGCTCTTCCCAATATAGGAATGTGTT...ATCCTTGTGTCGTGTCAGCACCAATACAATAAGGAGGGTTTTAATGTGAAGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256951.10
3UTR CAA 72 bp AACTTCCTCAAAAATGTTAGAGGAAGAGTAATAGGATaGTGCTACAATGAGCCATGTCCATCTCTCTCCTGT +
Preference number: 4 (lower is better)
Translates to: NFLKNVRGRVIG*CYNEPCPSLSC
Trigger: ACAGGAGAGAGATGGACATGGCTCATTGTAGCACAATCCTATTACTCTTCCTCTAACATTTTTGAGGAAGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256951.10
3UTR CAA 72 bp GAAATCATAATGACAAAGTTCATCTTCCCACAGTTTTaGCTGGCCAATCTCTCTAACCTCAGCCTAGGTAAT +
Preference number: 4 (lower is better)
Translates to: EIIMTKFIFPQF*LANLSNLSLGN
Trigger: ATTACCTAGGCTGAGGTTAGAGAGATTGGCCAGCAAAAACTGTGGGAAGATGAACTTTGTCATTATGATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR TCA 90 bp AATCTATTAACGAAGAAGCCCAATACAGTACTAGAACAATCCACCAGAGTAATGTTTCCAAAGACCTACTaGTGCATCTACCGTATTGGA +
Preference number: 4 (lower is better)
Translates to: NLLTKKPNTVLEQSTRVMFPKTY*CIYRIG
Trigger: TCCAATACGGTAGATGCATCAGTAGGTCTTTGGAAA...CATTACTCTGGTGGATTGTTCTAGTACTGTATTGGGCTTCTTCGTTAATAGATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256951.10
ENST00000537612.1
CDS-3UTR TCA 90 bp CTCATTAGCAATAGGAAAATGAATTCTGCTTGTTTGTCCCTAAACAGGAGTTCTTTTCCAAAGACCTACTaGTGCATCTACCGTATTGGA +
Preference number: 4 (lower is better)
Translates to: LISNRKMNSACLSLNRSSFPKTY*CIYRIG
Trigger: TCCAATACGGTAGATGCATCAGTAGGTCTTTGGAAA...AGAACTCCTGTTTAGGGACAAACAAGCAGAATTCATTTTCCTATTGCTAATGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544053.5
CDS-3UTR GCA 90 bp GAAGAAGCCCAATACAGTACTAGAACAATCCACCAGAGTAATGCAAATTACATGTGGTGCAATACTCTGTaGAACTATTTCATCCAAGAC +
Preference number: 4 (lower is better)
Translates to: EEAQYSTRTIHQSNANYMWCNTL*NYFIQD
Trigger: GTCTTGGATGAAATAGTTGCACAGAGTATTGCACCA...CATGTAATTTGCATTACTCTGGTGGATTGTTCTAGTACTGTATTGGGCTTCTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR GCA 90 bp CTCATTAGCAATAGGAAAATGAATTCTGCTTGTTTGTCCCTAAACAGGAGTTCTGAACTCCTACCTTTCTaGCTTCTTGAAGTGTCTTGT +
Preference number: 4 (lower is better)
Translates to: LISNRKMNSACLSLNRSSELLPF*LLEVSC
Trigger: ACAAGACACTTCAAGAAGGCAGAAAGGTAGGAGTTC...AGAACTCCTGTTTAGGGACAAACAAGCAGAATTCATTTTCCTATTGCTAATGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544053.5
CDS-3UTR CCA 90 bp ACGAAGAAGCCCAATACAGTACTAGAACAATCCACCAGAGTAATGCAAATTACAATTTGGTACCAGGAGTaGGGCATTGCTATAAAGATA +
Preference number: 4 (lower is better)
Translates to: TKKPNTVLEQSTRVMQITIWYQE*GIAIKI
Trigger: TATCTTTATAGCAATGCCCCACTCCTGGTACCAAAT...TGTAATTTGCATTACTCTGGTGGATTGTTCTAGTACTGTATTGGGCTTCTTCGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR CCA 90 bp AGTACTAGAACAATCCACCAGAGTAATGCAAATTACATGAGACATAAATGTCACACTAATACAGGAATTTaGTACCAGGAGTGGGGCATT +
Preference number: 4 (lower is better)
Translates to: STRTIHQSNANYMRHKCHTNTGI*YQEWGI
Trigger: AATGCCCCACTCCTGGTACCAAATTCCTGTATTAGT...GTGACATTTATGTCTCATGTAATTTGCATTACTCTGGTGGATTGTTCTAGTACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR CCA 90 bp AATCTATTAACGAAGAAGCCCAATACAGTACTAGAACAATCCACCAGAGTAATGTGTGAGTATTCCCTTTaGATATGTCTGAAATGTAAG +
Preference number: 4 (lower is better)
Translates to: NLLTKKPNTVLEQSTRVMCEYSL*ICLKCK
Trigger: CTTACATTTCAGACATATCCAAAGGGAATACTCACA...CATTACTCTGGTGGATTGTTCTAGTACTGTATTGGGCTTCTTCGTTAATAGATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256951.10
ENST00000537612.1
CDS GCA 90 bp GGGCATCTGAAGGGTCCCAGCGACAGAGGCGCTCTGAGTGGCAGGTaGTGGCAGCAGCCCTGGTCCGCTCTTCTGGAAGTATGTGACCGC +
Preference number: 5 (lower is better)
Translates to: GHLKGPSDRGALSGR*WQQPWSALLEVCDR
Trigger: GCGGTCACATACTTCCAGAAGAGCGGACCAGGGCTGCTGCCAGCACCTGCCACTCAGAGCGCCTCTGTCGCTGGGACCCTTCAGATGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431267.2
CDS GCA 90 bp GAAGGGCTGAAGGGTCCCAGCGACAGAGGCGCTCTGAGTGGCAGGTaGTGGCAGCAGCCCTGGTCCGCTCTTCTGGAAGTATGTGACCGC +
Preference number: 5 (lower is better)
Translates to: EGLKGPSDRGALSGR*WQQPWSALLEVCDR
Trigger: GCGGTCACATACTTCCAGAAGAGCGGACCAGGGCTGCTGCCAGCACCTGCCACTCAGAGCGCCTCTGTCGCTGGGACCCTTCAGCCCTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535134.5
CDS GCA 90 bp GCAGTCCTGAAGGGTCCCAGCGACAGAGGCGCTCTGAGTGGCAGGTaGTGGCAGCAGCCCTGGTCCGCTCTTCTGGAAGTATGTGACCGC +
Preference number: 5 (lower is better)
Translates to: AVLKGPSDRGALSGR*WQQPWSALLEVCDR
Trigger: GCGGTCACATACTTCCAGAAGAGCGGACCAGGGCTGCTGCCAGCACCTGCCACTCAGAGCGCCTCTGTCGCTGGGACCCTTCAGGACTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542474.5
CDS GCA 90 bp CCAGACCTGAAGGGTCCCAGCGACAGAGGCGCTCTGAGTGGCAGGTaGTGGCAGCAGCCCTGGTCCGCTCTTCTGGAAGTATGTGACCGC +
Preference number: 5 (lower is better)
Translates to: PDLKGPSDRGALSGR*WQQPWSALLEVCDR
Trigger: GCGGTCACATACTTCCAGAAGAGCGGACCAGGGCTGCTGCCAGCACCTGCCACTCAGAGCGCCTCTGTCGCTGGGACCCTTCAGGTCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544053.5
CDS CCA 90 bp CCCAGCGACAGAGGCGCTCTGAGTGGCAGGTGCTGGCAGCAGCCCTaGTCCGCTCTTCTGGAAGTATGTGACCGCACTGAGGGGAAGGAC +
Preference number: 5 (lower is better)
Translates to: PSDRGALSGRCWQQP*SALLEVCDRTEGKD
Trigger: GTCCTTCCCCTCAGTGCGGTCACATACTTCCAGAAGAGCGGACCAGGGCTGCTGCCAGCACCTGCCACTCAGAGCGCCTCTGTCGCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256951.10
ENST00000431267.2
ENST00000542289.1
ENST00000542474.5
ENST00000544053.5
CDS CCA 90 bp AAAGGGGGAAGGGCTGAAGGGTCCCAGCGACAGAGGCGCTCTGAGTaGCAGGTGCTGGCAGCAGCCCTGGTCCGCTCTTCTGGAAGTATG +
Preference number: 5 (lower is better)
Translates to: KGGRAEGSQRQRRSE*QVLAAALVRSSGSM
Trigger: CATACTTCCAGAAGAGCGGACCAGGGCTGCTGCCAGCACCTGCCACTCAGAGCGCCTCTGTCGCTGGGACCCTTCAGCCCTTCCCCCTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535134.5
CDS-3UTR CAA 90 bp TGGACCTCAGTGCATGACCCAGAAGTGGGGCTGGTGTTGTGGCAGCTGATGGGGGAAGTGGGGCTGGTGTaGTGGCAGCTGATGGGGCCC +
Preference number: 5 (lower is better)
Translates to: WTSVHDPEVGLVLWQLMGEVGLV*WQLMGP
Trigger: GGGCCCCATCAGCTGCCACAACACCAGCCCCACTTC...CCCCATCAGCTGCCACAACACCAGCCCCACTTCTGGGTCATGCACTGAGGTCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000256951.10
ENST00000431267.2
CDS GCA 90 bp AGAGTTCTGAAGGGTCCCAGCGACAGAGGCGCTCTGAGTGGCAGGTaGTGGCAGCAGCCCTGGTCCGCTCTTCTGGAAGTATGTGACCGC +
Preference number: 5 (lower is better)
Translates to: RVLKGPSDRGALSGR*WQQPWSALLEVCDR
Trigger: GCGGTCACATACTTCCAGAAGAGCGGACCAGGGCTGCTGCCAGCACCTGCCACTCAGAGCGCCTCTGTCGCTGGGACCCTTCAGAACTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000256951.10
ENST00000396301.7
ENST00000538364.5
ENST00000541935.5
ENST00000542289.1
CDS CCA 90 bp GTCTTGAGGGCATCTGAAGGGTCCCAGCGACAGAGGCGCTCTGAGTaGCAGGTGCTGGCAGCAGCCCTGGTCCGCTCTTCTGGAAGTATG +
Preference number: 5 (lower is better)
Translates to: VLRASEGSQRQRRSE*QVLAAALVRSSGSM
Trigger: CATACTTCCAGAAGAGCGGACCAGGGCTGCTGCCAGCACCTGCCACTCAGAGCGCCTCTGTCGCTGGGACCCTTCAGATGCCCTCAAGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431267.2
CDS CCA 90 bp AGCAAAGAGAGTTCTGAAGGGTCCCAGCGACAGAGGCGCTCTGAGTaGCAGGTGCTGGCAGCAGCCCTGGTCCGCTCTTCTGGAAGTATG +
Preference number: 5 (lower is better)
Translates to: SKESSEGSQRQRRSE*QVLAAALVRSSGSM
Trigger: CATACTTCCAGAAGAGCGGACCAGGGCTGCTGCCAGCACCTGCCACTCAGAGCGCCTCTGTCGCTGGGACCCTTCAGAACTCTCTTTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000256951.10
ENST00000396301.7
ENST00000538364.5
ENST00000541935.5
ENST00000542289.1
CDS-3UTR CAA 90 bp CCTCCCCTATCTCGGTTTTTCCTGTACAGCAACCTCCACTTCCCTCCCAGATTCGAAGTGGGGCTGGTGTaGTGGCAGCTGATGGGGCCC +
Preference number: 5 (lower is better)
Translates to: PPLSRFFLYSNLHFPPRFEVGLV*WQLMGP
Trigger: GGGCCCCATCAGCTGCCACAACACCAGCCCCACTTC...GAATCTGGGAGGGAAGTGGAGGTTGCTGTACAGGAAAAACCGAGATAGGGGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000256951.10
ENST00000431267.2
CDS-3UTR CAA 90 bp CCCCAGACAGTGTGTGTCACTAAGAACAGCTGGAGGCCAAGTCTGGTGGCTGCAAAGGCCTGCACTGTCTaGAGGGCATCTGAAGGGTCC +
Preference number: 5 (lower is better)
Translates to: PQTVCVTKNSWRPSLVAAKACTV*RASEGS
Trigger: GGACCCTTCAGATGCCCTCAAGACAGTGCAGGCCTT...TGCAGCCACCAGACTTGGCCTCCAGCTGTTCTTAGTGACACACACTGTCTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431267.2
CDS-3UTR CAA 90 bp CAGAACCTCATGCCTACCACCCAGCTGTCCTGTCTGGCCCTTGTGGGTCTAGGACATGTCTGCACTGGTTaGTGTGGCCACGCTGTGATG +
Preference number: 5 (lower is better)
Translates to: QNLMPTTQLSCLALVGLGHVCTG*CGHAVM
Trigger: CATCACAGCGTGGCCACACAAACCAGTGCAGACATG...TCCTAGACCCACAAGGGCCAGACAGGACAGCTGGGTGGTAGGCATGAGGTTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544053.5
CDS TCA 90 bp CAAGAGGGTCTACATTCCCGGGTGAGGGGTCTCCATGAAGCCCACTaGCAAGGCTGGGAACTTGATGGGCCTAATCTGGTCTCTGGAGGA +
Preference number: 5 (lower is better)
Translates to: QEGLHSRVRGLHEAH*QGWELDGPNLVSGG
Trigger: TCCTCCAGAGACCAGATTAGGCCCATCAAGTTCCCAGCCTTGTCAGTGGGCTTCATGGAGACCCCTCACCCGGGAATGTAGACCCTCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542474.5
CDS-3UTR CAA 90 bp GAACCTCATGCCTACCACCCAGCTGTCCTGTCTGGCCCTTGTGGGTCTAGGAAAGATATGCACTGCCACTaGGTAGCTACCCAGGAGCAC +
Preference number: 5 (lower is better)
Translates to: EPHAYHPAVLSGPCGSRKDMHCH*VATQEH
Trigger: GTGCTCCTGGGTAGCTACCAAGTGGCAGTGCATATC...TTTCCTAGACCCACAAGGGCCAGACAGGACAGCTGGGTGGTAGGCATGAGGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544053.5
CDS-3UTR CAA 90 bp CCCCAGACAGTGTGTGTCACTAAGAACAGCTGGAGGCCAAGTCTGGTGGCTGCACCTAACATGGCACTGTaGCAAGACTGCCCCTTGGAT +
Preference number: 5 (lower is better)
Translates to: PQTVCVTKNSWRPSLVAAPNMAL*QDCPLD
Trigger: ATCCAAGGGGCAGTCTTGCAACAGTGCCATGTTAGG...TGCAGCCACCAGACTTGGCCTCCAGCTGTTCTTAGTGACACACACTGTCTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS TCA 90 bp GCCCAACTTCCTCATACCTCCCAAGATTCACACCTCACCAGATCCTaGTCTCCTTGCCCCCTATGGGGAAAGGAACAGGCTGATTGCAGG +
Preference number: 5 (lower is better)
Translates to: AQLPHTSQDSHLTRS*SPCPLWGKEQADCR
Trigger: CCTGCAATCAGCCTGTTCCTTTCCCCATAGGGGGCAAGGAGATCAGGATCTGGTGAGGTGTGAATCTTGGGAGGTATGAGGAAGTTGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535134.5
CDS-3UTR CAA 90 bp CTCAGTGCAGTAGGTCTGTGGACCTCAGTGCATGACCCAGAAGTGGGGCTGGTGCTGGAATGTGATGTTTaGCTTTGGGTCAGAAGGGCA +
Preference number: 5 (lower is better)
Translates to: LSAVGLWTSVHDPEVGLVLECDV*LWVRRA
Trigger: TGCCCTTCTGACCCAAAGCAAAACATCACATTCCAG...CACCAGCCCCACTTCTGGGTCATGCACTGAGGTCCACAGACCTACTGCACTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256951.10
ENST00000431267.2
CDS-3UTR CAA 90 bp TGCAGGGAGGCTCTCTGGACCCCATCAAGGGAGCATCAAAGTACTAGCCAACTATCCAGAAGAGCTGCCTaGGCTTTCAGCAAGAGGCCT +
Preference number: 5 (lower is better)
Translates to: CREALWTPSREHQSTSQLSRRAA*AFSKRP
Trigger: AGGCCTCTTGCTGAAAGCCAAGGCAGCTCTTCTGGA...TAGTTGGCTAGTACTTTGATGCTCCCTTGATGGGGTCCAGAGAGCCTCCCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR CAA 90 bp CCCCAGACAGTGTGTGTCACTAAGAACAGCTGGAGGCCAAGTCTGGTGGCTGCAAGACAGTATCTGCTCTaGCCAGAACTTGTACCGCTA +
Preference number: 5 (lower is better)
Translates to: PQTVCVTKNSWRPSLVAARQYLL*PELVPL
Trigger: TAGCGGTACAAGTTCTGGCAAGAGCAGATACTGTCT...TGCAGCCACCAGACTTGGCCTCCAGCTGTTCTTAGTGACACACACTGTCTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256951.10
ENST00000431267.2
CDS-3UTR CAA 90 bp GGCCCCAGACAGTGTGTGTCACTAAGAACAGCTGGAGGCCAAGTCTGGTGGCTGTTTCCTCCTCCCATTTaGTCACTGAATTCCACAGAG +
Preference number: 5 (lower is better)
Translates to: GPRQCVSLRTAGGQVWWLFPPPI*SLNSTE
Trigger: CTCTGTGGAATTCAGTGACAAAATGGGAGGAGGAAA...CAGCCACCAGACTTGGCCTCCAGCTGTTCTTAGTGACACACACTGTCTGGGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000256951.10
ENST00000431267.2
CDS TCA 90 bp TTCCATCACGATTCGCATAATGAAGCACACCAGTGTGGTGGCCCCTaGGAGGAAGAACCGGTTTCCCTTCTCCATGGTGAAGAGCTGGAA +
Preference number: 5 (lower is better)
Translates to: FHHDSHNEAHQCGGP*EEEPVSLLHGEELE
Trigger: TTCCAGCTCTTCACCATGGAGAAGGGAAACCGGTTCTTCCTCTCAGGGGCCACCACACTGGTGTGCTTCATTATGCGAATCGTGATGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396301.7
CDS-3UTR CAA 90 bp CAGGGCAGGGGCTTGGCAGTAGAGAATCCCCTCAGTAATGGTTTGGGATTTGACCTTTGGGTCCCATTCTaGAGTGGTCATGGAGAGTTC +
Preference number: 5 (lower is better)
Translates to: QGRGLAVENPLSNGLGFDLWVPF*SGHGEF
Trigger: GAACTCTCCATGACCACTCAAGAATGGGACCCAAAG...GTCAAATCCCAAACCATTACTGAGGGGATTCTCTACTGCCAAGCCCCTGCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR CAA 90 bp CAGAACCTCATGCCTACCACCCAGCTGTCCTGTCTGGCCCTTGTGGGTCTAGGAAACCAGAGGAGAAAATaGCACAAGGAAGTTTCACTG +
Preference number: 5 (lower is better)
Translates to: QNLMPTTQLSCLALVGLGNQRRK*HKEVSL
Trigger: CAGTGAAACTTCCTTGTGCAATTTTCTCCTCTGGTT...TCCTAGACCCACAAGGGCCAGACAGGACAGCTGGGTGGTAGGCATGAGGTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544053.5
CDS-3UTR CAA 90 bp CCCCAGACAGTGTGTGTCACTAAGAACAGCTGGAGGCCAAGTCTGGTGGCTGCATGCTCTTGCCAGAACTaGTACCGCTATTTTAACTCA +
Preference number: 5 (lower is better)
Translates to: PQTVCVTKNSWRPSLVAACSCQN*YRYFNS
Trigger: TGAGTTAAAATAGCGGTACAAGTTCTGGCAAGAGCA...TGCAGCCACCAGACTTGGCCTCCAGCTGTTCTTAGTGACACACACTGTCTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256951.10
ENST00000431267.2
CDS-3UTR CAA 90 bp CCCTCCCCTATCTCGGTTTTTCCTGTACAGCAACCTCCACTTCCCTCCCAGATTAATCAGCTTCCAGAATaGCCATGCCTCACCTGTGAA +
Preference number: 5 (lower is better)
Translates to: PSPISVFPVQQPPLPSQINQLPE*PCLTCE
Trigger: TTCACAGGTGAGGCATGGCAATTCTGGAAGCTGATT...AATCTGGGAGGGAAGTGGAGGTTGCTGTACAGGAAAAACCGAGATAGGGGAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR CAA 90 bp CCCCAGACAGTGTGTGTCACTAAGAACAGCTGGAGGCCAAGTCTGGTGGCTGCAGATAGAGCTAGGAGTTaGTTGCAGAGTCTGACAAAA +
Preference number: 5 (lower is better)
Translates to: PQTVCVTKNSWRPSLVAADRARS*LQSLTK
Trigger: TTTTGTCAGACTCTGCAACAAACTCCTAGCTCTATC...TGCAGCCACCAGACTTGGCCTCCAGCTGTTCTTAGTGACACACACTGTCTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR CAA 90 bp GGCCCCAGACAGTGTGTGTCACTAAGAACAGCTGGAGGCCAAGTCTGGTGGCTGCTTTCCTTATCTGTTTaGTGCTCTGAAAATCGTGTC +
Preference number: 5 (lower is better)
Translates to: GPRQCVSLRTAGGQVWWLLSLSV*CSENRV
Trigger: GACACGATTTTCAGAGCACAAAACAGATAAGGAAAG...CAGCCACCAGACTTGGCCTCCAGCTGTTCTTAGTGACACACACTGTCTGGGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR CAA 90 bp CCCTCCCCTATCTCGGTTTTTCCTGTACAGCAACCTCCACTTCCCTCCCAGATTCCAGGAGCACTGGTTTaGAACAATGAAGCAGATGAG +
Preference number: 5 (lower is better)
Translates to: PSPISVFPVQQPPLPSQIPGALV*NNEADE
Trigger: CTCATCTGCTTCATTGTTCAAAACCAGTGCTCCTGG...AATCTGGGAGGGAAGTGGAGGTTGCTGTACAGGAAAAACCGAGATAGGGGAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000544053.5
CDS GCA 90 bp AAAGAGAGTTCTCCTGCCCTTTCCTGTGTCCACGTTTCAGTTATGTaGCCCACCAGGCTCCATAGAGTCTACAGAAAAGCAGTCTTGCCT +
Preference number: 5 (lower is better)
Translates to: KESSPALSCVHVSVM*PTRLHRVYRKAVLP
Trigger: AGGCAAGACTGCTTTTCTGTAGACTCTATGGAGCCTGGTGGGGCACATAACTGAAACGTGGACACAGGAAAGGGCAGGAGAACTCTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542474.5
CDS-3UTR CAA 90 bp CCTCCCCTATCTCGGTTTTTCCTGTACAGCAACCTCCACTTCCCTCCCAGATTCGATGCATCTACCGTATaGGAAACCAACCAGACATTG +
Preference number: 5 (lower is better)
Translates to: PPLSRFFLYSNLHFPPRFDASTV*ETNQTL
Trigger: CAATGTCTGGTTGGTTTCCAATACGGTAGATGCATC...GAATCTGGGAGGGAAGTGGAGGTTGCTGTACAGGAAAAACCGAGATAGGGGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000256951.10
ENST00000396301.7
CDS-3UTR CAA 90 bp GAGTCTGACAAAAGTTCCCTCTGCAGAAGGGATGGAAGGATAGCCTTGGGGGTTACCCTCCTTATTGTATaGGTGCTGACACGACACAAG +
Preference number: 5 (lower is better)
Translates to: ESDKSSLCRRDGRIALGVTLLIV*VLTRHK
Trigger: CTTGTGTCGTGTCAGCACCAATACAATAAGGAGGGT...AACCCCCAAGGCTATCCTTCCATCCCTTCTGCAGAGGGAACTTTTGTCAGACTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR CAA 90 bp CCCTCCCCTATCTCGGTTTTTCCTGTACAGCAACCTCCACTTCCCTCCCAGATTGAAACCAACCAGACATaGGCAATGGTGCTAACAAAT +
Preference number: 5 (lower is better)
Translates to: PSPISVFPVQQPPLPSQIETNQT*AMVLTN
Trigger: ATTTGTTAGCACCATTGCCAATGTCTGGTTGGTTTC...AATCTGGGAGGGAAGTGGAGGTTGCTGTACAGGAAAAACCGAGATAGGGGAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000256951.10
ENST00000396301.7
CDS-3UTR CAA 90 bp GAGTCTGACAAAAGTTCCCTCTGCAGAAGGGATGGAAGGATAGCCTTGGGGGTTTTTCCTCCTCCCATTTaGTCACTGAATTCCACAGAG +
Preference number: 5 (lower is better)
Translates to: ESDKSSLCRRDGRIALGVFPPPI*SLNSTE
Trigger: CTCTGTGGAATTCAGTGACAAAATGGGAGGAGGAAA...AACCCCCAAGGCTATCCTTCCATCCCTTCTGCAGAGGGAACTTTTGTCAGACTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR CAA 90 bp CCCTCCCCTATCTCGGTTTTTCCTGTACAGCAACCTCCACTTCCCTCCCAGATTGAAACACTGACTGCATaGAGGGGAATCCTAAAAACA +
Preference number: 5 (lower is better)
Translates to: PSPISVFPVQQPPLPSQIETLTA*RGILKT
Trigger: TGTTTTTAGGATTCCCCTCAATGCAGTCAGTGTTTC...AATCTGGGAGGGAAGTGGAGGTTGCTGTACAGGAAAAACCGAGATAGGGGAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR CAA 90 bp GGCACTTCAGACTGGAATGTGATGTTTTGCTTTGGGTCAGAAGGGCAGGATGGCTCACCCAAGGGCCTGTaGTTTGGTTTTGGTTTATGT +
Preference number: 5 (lower is better)
Translates to: GTSDWNVMFCFGSEGQDGSPKGL*FGFGLC
Trigger: ACATAAACCAAAACCAAACAACAGGCCCTTGGGTGA...GCCATCCTGCCCTTCTGACCCAAAGCAAAACATCACATTCCAGTCTGAAGTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR CAA 90 bp CCCTCCCCTATCTCGGTTTTTCCTGTACAGCAACCTCCACTTCCCTCCCAGATTAGAGCTAGGAGTTTGTaGCAGAGTCTGACAAAAGTT +
Preference number: 5 (lower is better)
Translates to: PSPISVFPVQQPPLPSQIRARSL*QSLTKV
Trigger: AACTTTTGTCAGACTCTGCAACAAACTCCTAGCTCT...AATCTGGGAGGGAAGTGGAGGTTGCTGTACAGGAAAAACCGAGATAGGGGAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR CAA 90 bp GGTCAGAAGGGCAGGATGGCTTCCAGGCTTAGCGTATTCAGCACAAAGACAGTATCACCATCCAGGCTTTaGAGGAGAAAGATACCAATC +
Preference number: 5 (lower is better)
Translates to: GQKGRMASRLSVFSTKTVSPSRL*RRKIPI
Trigger: GATTGGTATCTTTCTCCTCAAAAGCCTGGATGGTGA...TACTGTCTTTGTGCTGAATACGCTAAGCCTGGAAGCCATCCTGCCCTTCTGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR CAA 90 bp ATGGTTTTAACCAAAATGCTGACAGTGATGTGGACGATTAAGTCCACACTGAGGAAACCCCGCCTTCCCTaGGGCTCCACACAATCAGCA +
Preference number: 5 (lower is better)
Translates to: MVLTKMLTVMWTIKSTLRKPRLP*GSTQSA
Trigger: TGCTGATTGTGTGGAGCCCAAGGGAAGGCGGGGTTT...CCTCAGTGTGGACTTAATCGTCCACATCACTGTCAGCATTTTGGTTAAAACCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR CAA 90 bp AAATTAGAGGTGTCTGGGCTCTCATGTCTGCACTGGTTTGTGTGGCCACGCTGTTACCTTTCTGCCTTCTaGAAGTGTCTTGTACACACG +
Preference number: 5 (lower is better)
Translates to: KLEVSGLSCLHWFVWPRCYLSAF*KCLVHT
Trigger: CGTGTGTACAAGACACTTCAAGAAGGCAGAAAGGTA...ACAGCGTGGCCACACAAACCAGTGCAGACATGAGAGCCCAGACACCTCTAATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544053.5
CDS TCA 90 bp GCTGTCACTGCAGCTAATGTTGGTACAGTTTTTCCAAAGACCTACTaGTGCATCTACCGTATTGGAAACCAACCAGACCTGAAGGGTCCC +
Preference number: 5 (lower is better)
Translates to: AVTAANVGTVFPKTY*CIYRIGNQPDLKGP
Trigger: GGGACCCTTCAGGTCTGGTTGGTTTCCAATACGGTAGATGCATCAGTAGGTCTTTGGAAAAACTGTACCAACATTAGCTGCAGTGACAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544053.5
CDS-3UTR CAA 90 bp AGACTGGAATGTGATGTTTTGCTTTGGGTCAGAAGGGCAGGATGGCTTCCAGGCGAAACCAACCAGACATaGGCAATGGTGCTAACAAAT +
Preference number: 5 (lower is better)
Translates to: RLECDVLLWVRRAGWLPGETNQT*AMVLTN
Trigger: ATTTGTTAGCACCATTGCCAATGTCTGGTTGGTTTC...GCCTGGAAGCCATCCTGCCCTTCTGACCCAAAGCAAAACATCACATTCCAGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR CAA 90 bp CCAGGCTTAGCGTATTCAGCACAAAGACAGTATCTGCTCTTGCCAGAACTTGTATTGCAAGACTGCCCCTaGGATCCCATAGTTTGTGTG +
Preference number: 5 (lower is better)
Translates to: PGLAYSAQRQYLLLPELVLQDCP*DPIVCV
Trigger: CACACAAACTATGGGATCCAAGGGGCAGTCTTGCAA...TACAAGTTCTGGCAAGAGCAGATACTGTCTTTGTGCTGAATACGCTAAGCCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR CAA 90 bp ACTTTTCAGCCTCCATTGTGTATTTTTGGTGCAATACTCTGTGCAACTATTTCACTGCTGGCCCACCCCTaGCAGACTTTGGGCTTGCCT +
Preference number: 5 (lower is better)
Translates to: TFQPPLCIFGAILCATISLLAHP*QTLGLP
Trigger: AGGCAAGCCCAAAGTCTGCAAGGGGTGGGCCAGCAG...TGAAATAGTTGCACAGAGTATTGCACCAAAAATACACAATGGAGGCTGAAAAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS TCA 90 bp ACAGATATGCACTGCCACTTGGTAGCTACCCAGGAGCACTGGTTTTaGACAATGAAGCAGATGAGGGTTCTTAACCTAAGCAGCAATCCA +
Preference number: 5 (lower is better)
Translates to: TDMHCHLVATQEHWF*TMKQMRVLNLSSNP
Trigger: TGGATTGCTGCTTAGGTTAAGAACCCTCATCTGCTTCATTGTTCAAAACCAGTGCTCCTGGGTAGCTACCAAGTGGCAGTGCATATCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544053.5
ENST00000546357.1
CDS-3UTR CAA 90 bp CCAGGCTTAGCGTATTCAGCACAAAGACAGTATCTGCTCTTGCCAGAACTTGTAAGACAGTATCTGCTCTaGCCAGAACTTGTACCGCTA +
Preference number: 5 (lower is better)
Translates to: PGLAYSAQRQYLLLPELVRQYLL*PELVPL
Trigger: TAGCGGTACAAGTTCTGGCAAGAGCAGATACTGTCT...TACAAGTTCTGGCAAGAGCAGATACTGTCTTTGTGCTGAATACGCTAAGCCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256951.10
ENST00000431267.2
CDS-3UTR CAA 90 bp GCAGTCTTTATCCAGTCCTTATTGCTCACAGAAAGATACCAGTCCTTACTGCTCGATGGAAGGATAGCCTaGGGGGTTGATTTAGGACTG +
Preference number: 5 (lower is better)
Translates to: AVFIQSLLLTERYQSLLLDGRIA*GVDLGL
Trigger: CAGTCCTAAATCAACCCCCAAGGCTATCCTTCCATC...GAGCAGTAAGGACTGGTATCTTTCTGTGAGCAATAAGGACTGGATAAAGACTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR CAA 90 bp GCAGGATGGCTTCCAGGCTTAGCGTATTCAGCACAAAGACAGTATCTGCTCTTGTTTATCCAGTCCTTATaGCTCACAGAAAGATACCAG +
Preference number: 5 (lower is better)
Translates to: AGWLPGLAYSAQRQYLLLFIQSL*LTERYQ
Trigger: CTGGTATCTTTCTGTGAGCAATAAGGACTGGATAAA...CAAGAGCAGATACTGTCTTTGTGCTGAATACGCTAAGCCTGGAAGCCATCCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS TCA 90 bp GCTGTCACTGCAGCTAATGTTGGTACAGTTTTTCCAAAGACCTACTaGTGCATCTACCGTATTGGAAACCAACCAGACATTGGCAATGGT +
Preference number: 5 (lower is better)
Translates to: AVTAANVGTVFPKTY*CIYRIGNQPDIGNG
Trigger: ACCATTGCCAATGTCTGGTTGGTTTCCAATACGGTAGATGCATCAGTAGGTCTTTGGAAAAACTGTACCAACATTAGCTGCAGTGACAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000256951.10
ENST00000396301.7
ENST00000537612.1
ENST00000538364.5
CDS TCA 90 bp GCTGTCACTGCAGCTAATGTTGGTACAGTTTTTCCAAAGACCTACTaGTGCATCTACCGTATTGGAAACCAACCAGACCTGAAACCAGAA +
Preference number: 5 (lower is better)
Translates to: AVTAANVGTVFPKTY*CIYRIGNQPDLKPE
Trigger: TTCTGGTTTCAGGTCTGGTTGGTTTCCAATACGGTAGATGCATCAGTAGGTCTTTGGAAAAACTGTACCAACATTAGCTGCAGTGACAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000536383.1
ENST00000546357.1
CDS-3UTR CAA 90 bp GAAAGCTACTCAGGGATGCAAAAGAGCATGTCCTTCCACCAAACCGAGTATATTGCTAATCTGTTCAAGTaGCCAGAAACACCCATGGTA +
Preference number: 5 (lower is better)
Translates to: ESYSGMQKSMSFHQTEYIANLFK*PETPMV
Trigger: TACCATGGGTGTTTCTGGCAACTTGAACAGATTAGC...AATATACTCGGTTTGGTGGAAGGACATGCTCTTTTGCATCCCTGAGTAGCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544053.5
CDS-3UTR CAA 90 bp GCCGTGGTGATACTGCGTTCCATCACGATTCGCATAATGACTAGTGTAGATGGAATGAATTCTGCTTGTTaGTCCCTAAACAGGAGTTCT +
Preference number: 5 (lower is better)
Translates to: AVVILRSITIRIMTSVDGMNSAC*SLNRSS
Trigger: AGAACTCCTGTTTAGGGACAAACAAGCAGAATTCAT...TCCATCTACACTAGTCATTATGCGAATCGTGATGGAACGCAGTATCACCACGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544053.5
CDS-3UTR CAA 90 bp CTGCTTCACATTAAAACCCTCCTTATTGTATTGGTGCTGACACGACACAAGGATGATGCATCTACCGTATaGGAAACCAACCAGACATTG +
Preference number: 5 (lower is better)
Translates to: LLHIKTLLIVLVLTRHKDDASTV*ETNQTL
Trigger: CAATGTCTGGTTGGTTTCCAATACGGTAGATGCATC...ATCCTTGTGTCGTGTCAGCACCAATACAATAAGGAGGGTTTTAATGTGAAGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR CAA 90 bp ATGGTTTTAACCAAAATGCTGACAGTGATGTGGACGATTAAGTCCACACTGAGGCCAAGGGCCTGTTGTTaGGTTTTGGTTTATGTGTGT +
Preference number: 5 (lower is better)
Translates to: MVLTKMLTVMWTIKSTLRPRACC*VLVYVC
Trigger: ACACACATAAACCAAAACCAAACAACAGGCCCTTGG...CCTCAGTGTGGACTTAATCGTCCACATCACTGTCAGCATTTTGGTTAAAACCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR CAA 90 bp TGGTTTATGTGTGTTTTAATCAGCTTCCAGAATTGCCATGCCTCACCTGTGAAGAAGATGAAGGAAAGTTaGGAGCTTCCTGGAGACTTG +
Preference number: 5 (lower is better)
Translates to: WFMCVLISFQNCHASPVKKMKES*ELPGDL
Trigger: CAAGTCTCCAGGAAGCTCCAAACTTTCCTTCATCTT...CTTCACAGGTGAGGCATGGCAATTCTGGAAGCTGATTAAAACACACATAAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR CAA 90 bp CTGCTTCACATTAAAACCCTCCTTATTGTATTGGTGCTGACACGACACAAGGATGGAAGAGTAATAGGATaGTGCTACAATGAGCCATGT +
Preference number: 5 (lower is better)
Translates to: LLHIKTLLIVLVLTRHKDGRVIG*CYNEPC
Trigger: ACATGGCTCATTGTAGCACAATCCTATTACTCTTCC...ATCCTTGTGTCGTGTCAGCACCAATACAATAAGGAGGGTTTTAATGTGAAGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR CAA 90 bp AATCTATTAACGAAGAAGCCCAATACAGTACTAGAACAATCCACCAGAGTAATGCTCAGCCTAGGTAATTaGGTGGCTTGCCCTCAACAT +
Preference number: 5 (lower is better)
Translates to: NLLTKKPNTVLEQSTRVMLSLGN*VACPQH
Trigger: ATGTTGAGGGCAAGCCACCAAATTACCTAGGCTGAG...CATTACTCTGGTGGATTGTTCTAGTACTGTATTGGGCTTCTTCGTTAATAGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR CAA 90 bp TTGGATCCCATAGTTTGTGTGGTACTTTTACCACCGAATTGTTCACTAGTGACTATCTTCCCACAGTTTTaGCTGGCCAATCTCTCTAAC +
Preference number: 5 (lower is better)
Translates to: LDPIVCVVLLPPNCSLVTIFPQF*LANLSN
Trigger: GTTAGAGAGATTGGCCAGCAAAAACTGTGGGAAGAT...AGTCACTAGTGAACAATTCGGTGGTAAAAGTACCACACAAACTATGGGATCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR CAA 90 bp TTGGATCCCATAGTTTGTGTGGTACTTTTACCACCGAATTGTTCACTAGTGACTAGTTATCATTTGCCTTaGGGTCCCATTCTTGAGTGG +
Preference number: 5 (lower is better)
Translates to: LDPIVCVVLLPPNCSLVTSYHLP*GPILEW
Trigger: CCACTCAAGAATGGGACCCAAAGGCAAATGATAACT...AGTCACTAGTGAACAATTCGGTGGTAAAAGTACCACACAAACTATGGGATCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR CAA 90 bp TGGTTTATGTGTGTTTTAATCAGCTTCCAGAATTGCCATGCCTCACCTGTGAAGTATTGGGAACTGGAGTaGCCAATAGATCAGCAGTTA +
Preference number: 5 (lower is better)
Translates to: WFMCVLISFQNCHASPVKYWELE*PIDQQL
Trigger: TAACTGCTGATCTATTGGCAACTCCAGTTCCCAATA...CTTCACAGGTGAGGCATGGCAATTCTGGAAGCTGATTAAAACACACATAAACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR CAA 90 bp ATTCAGCACAAAGACAGTATCTGCTCTTGCCAGAACTTGTACCGCTATTTTAACTGCTCTTGCCAGAACTaGTACCGCTATTTTAACTCA +
Preference number: 5 (lower is better)
Translates to: IQHKDSICSCQNLYRYFNCSCQN*YRYFNS
Trigger: TGAGTTAAAATAGCGGTACAAGTTCTGGCAAGAGCA...GTTAAAATAGCGGTACAAGTTCTGGCAAGAGCAGATACTGTCTTTGTGCTGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000256951.10
ENST00000431267.2
CDS-3UTR CAA 90 bp AATCTATTAACGAAGAAGCCCAATACAGTACTAGAACAATCCACCAGAGTAATGCTGGAATGTGATGTTTaGCTTTGGGTCAGAAGGGCA +
Preference number: 5 (lower is better)
Translates to: NLLTKKPNTVLEQSTRVMLECDV*LWVRRA
Trigger: TGCCCTTCTGACCCAAAGCAAAACATCACATTCCAG...CATTACTCTGGTGGATTGTTCTAGTACTGTATTGGGCTTCTTCGTTAATAGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR CAA 90 bp ACGAAGAAGCCCAATACAGTACTAGAACAATCCACCAGAGTAATGCAAATTACAGAAACCAACCAGACATaGGCAATGGTGCTAACAAAT +
Preference number: 5 (lower is better)
Translates to: TKKPNTVLEQSTRVMQITETNQT*AMVLTN
Trigger: ATTTGTTAGCACCATTGCCAATGTCTGGTTGGTTTC...TGTAATTTGCATTACTCTGGTGGATTGTTCTAGTACTGTATTGGGCTTCTTCGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000256951.10
ENST00000537612.1
CDS-3UTR CAA 90 bp ACTTTTCAGCCTCCATTGTGTATTTTTGGTGCAATACTCTGTGCAACTATTTCACTTGGATCCCATAGTTaGTGTGGTACTTTTACCACC +
Preference number: 5 (lower is better)
Translates to: TFQPPLCIFGAILCATISLGSHS*CGTFTT
Trigger: GGTGGTAAAAGTACCACACAAACTATGGGATCCAAG...TGAAATAGTTGCACAGAGTATTGCACCAAAAATACACAATGGAGGCTGAAAAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR CAA 90 bp AATCTATTAACGAAGAAGCCCAATACAGTACTAGAACAATCCACCAGAGTAATGACAAAGGAATGGCATTaGGGACAAAGTGATGTTGGC +
Preference number: 5 (lower is better)
Translates to: NLLTKKPNTVLEQSTRVMTKEWH*GQSDVG
Trigger: GCCAACATCACTTTGTCCCAAATGCCATTCCTTTGT...CATTACTCTGGTGGATTGTTCTAGTACTGTATTGGGCTTCTTCGTTAATAGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR CAA 90 bp GAAGAAGCCCAATACAGTACTAGAACAATCCACCAGAGTAATGCAAATTACATGAACCAGAAGCTTGAGTaGAGTATGGACCTGACATAT +
Preference number: 5 (lower is better)
Translates to: EEAQYSTRTIHQSNANYMNQKLE*SMDLTY
Trigger: ATATGTCAGGTCCATACTCAACTCAAGCTTCTGGTT...CATGTAATTTGCATTACTCTGGTGGATTGTTCTAGTACTGTATTGGGCTTCTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR CAA 90 bp CTGCTTCACATTAAAACCCTCCTTATTGTATTGGTGCTGACACGACACAAGGATCTTCCTGGAGACTTGTaGAATGGTTTTAACCAAAAT +
Preference number: 5 (lower is better)
Translates to: LLHIKTLLIVLVLTRHKDLPGDL*NGFNQN
Trigger: ATTTTGGTTAAAACCATTCAACAAGTCTCCAGGAAG...ATCCTTGTGTCGTGTCAGCACCAATACAATAAGGAGGGTTTTAATGTGAAGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS CCA 90 bp TGTTGGTACAGTTTTTCCAAAGACCTACTGATGCATCTACCGTATTaGAAACCAACCAGACCTGAAACCAGAAGGAAAGAAAATGTTAAT +
Preference number: 5 (lower is better)
Translates to: CWYSFSKDLLMHLPY*KPTRPETRRKENVN
Trigger: ATTAACATTTTCTTTCCTTCTGGTTTCAGGTCTGGTTGGTTTCCAATACGGTAGATGCATCAGTAGGTCTTTGGAAAAACTGTACCAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536383.1
CDS-3UTR CAA 90 bp TCTCCTGTTGTATACTTAAAAGAAACACTGACTGCATTGAGGGGAATCCTAAAAGAGCTTCCTGGAGACTaGTTGAATGGTTTTAACCAA +
Preference number: 5 (lower is better)
Translates to: SPVVYLKETLTALRGILKELPGD*LNGFNQ
Trigger: TTGGTTAAAACCATTCAACAAGTCTCCAGGAAGCTC...TTTTAGGATTCCCCTCAATGCAGTCAGTGTTTCTTTTAAGTATACAACAGGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR CAA 90 bp ACGAAGAAGCCCAATACAGTACTAGAACAATCCACCAGAGTAATGCAAATTACATGTAGACAGTCATTTTaGAATCAGGGCTCACTTTGT +
Preference number: 5 (lower is better)
Translates to: TKKPNTVLEQSTRVMQITCRQSF*NQGSLC
Trigger: ACAAAGTGAGCCCTGATTCAAAAATGACTGTCTACA...TGTAATTTGCATTACTCTGGTGGATTGTTCTAGTACTGTATTGGGCTTCTTCGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR CAA 90 bp GAAGAAGCCCAATACAGTACTAGAACAATCCACCAGAGTAATGCAAATTACATGACTTTTCAGCCTCCATaGTGTATTTTTGGTGCAATA +
Preference number: 5 (lower is better)
Translates to: EEAQYSTRTIHQSNANYMTFQPP*CIFGAI
Trigger: TATTGCACCAAAAATACACAATGGAGGCTGAAAAGT...CATGTAATTTGCATTACTCTGGTGGATTGTTCTAGTACTGTATTGGGCTTCTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS-3UTR CAA 90 bp CTCATTAGCAATAGGAAAATGAATTCTGCTTGTTTGTCCCTAAACAGGAGTTCTGAAAATGAATTCTGCTaGTTTGTCCCTAAACAGGAG +
Preference number: 5 (lower is better)
Translates to: LISNRKMNSACLSLNRSSENEFC*FVPKQE
Trigger: CTCCTGTTTAGGGACAAACAAGCAGAATTCATTTTC...AGAACTCCTGTTTAGGGACAAACAAGCAGAATTCATTTTCCTATTGCTAATGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544053.5
CDS-3UTR CAA 90 bp AATCTATTAACGAAGAAGCCCAATACAGTACTAGAACAATCCACCAGAGTAATGACTTTTACCACCGAATaGTTCACTAGTGACTTTAGA +
Preference number: 5 (lower is better)
Translates to: NLLTKKPNTVLEQSTRVMTFTTE*FTSDFR
Trigger: TCTAAAGTCACTAGTGAACAATTCGGTGGTAAAAGT...CATTACTCTGGTGGATTGTTCTAGTACTGTATTGGGCTTCTTCGTTAATAGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256951.10
CDS CCA 72 bp GTGGCAGGTGCTGGCAGCAGCCCTGGTCCGCTCTTCTaGAAGTATGTGACCGCACTGAGGGGAAGGACCTGC +
Preference number: 6 (lower is better)
Translates to: VAGAGSSPGPLF*KYVTALRGRTC
Trigger: GCAGGTCCTTCCCCTCAGTGCGGTCACATACTTCCAGAAGAGCGGACCAGGGCTGCTGCCAGCACCTGCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256951.10
ENST00000431267.2
ENST00000542289.1
ENST00000542474.5
ENST00000544053.5
CDS TCA 72 bp CTACATTCCCGGGTGAGGGGTCTCCATGAAGCCCACTaGCAAGGCTGGGAACTTGATGGGCCTAATCTGGTC +
Preference number: 6 (lower is better)
Translates to: LHSRVRGLHEAH*QGWELDGPNLV
Trigger: GACCAGATTAGGCCCATCAAGTTCCCAGCCTTGTCAGTGGGCTTCATGGAGACCCCTCACCCGGGAATGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542474.5
CDS CCA 72 bp TCCAGGTTCACCTCAAGCTCCACTCACCCCTGCTGCTaGGAAGGCTCTTCTAGAGACCGAAGAAGCTGCACT +
Preference number: 6 (lower is better)
Translates to: SRFTSSSTHPCC*EGSSRDRRSCT
Trigger: AGTGCAGCTTCTTCGGTCTCTAGAAGAGCCTTCCCAGCAGCAGGGGTGAGTGGAGCTTGAGGTGAACCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541935.5
CDS CAA 72 bp GGGGTCTCCATGAAGCCCACTGACAAGGCTGGGAACTaGATGGGCCTAATCTGGTCTCTGGAGGAAGCAGGA +
Preference number: 6 (lower is better)
Translates to: GVSMKPTDKAGN*MGLIWSLEEAG
Trigger: TCCTGCTTCCTCCAGAGACCAGATTAGGCCCATCAAGTTCCCAGCCTTGTCAGTGGGCTTCATGGAGACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542474.5
CDS TCA 72 bp CCTCATACCTCCCAAGATTCACACCTCACCAGATCCTaGTCTCCTTGCCCCCTATGGGGAAAGGAACAGGCT +
Preference number: 6 (lower is better)
Translates to: PHTSQDSHLTRS*SPCPLWGKEQA
Trigger: AGCCTGTTCCTTTCCCCATAGGGGGCAAGGAGATCAGGATCTGGTGAGGTGTGAATCTTGGGAGGTATGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535134.5
CDS CCA 72 bp AGGAAGAACCGGTTTCCCTTCTCCATGGTGAAGAGCTaGAACACGAAGACCAGGAGGGCAATGACACAGAAG +
Preference number: 6 (lower is better)
Translates to: RKNRFPFSMVKS*NTKTRRAMTQK
Trigger: CTTCTGTGTCATTGCCCTCCTGGTCTTCGTGTTCCAGCTCTTCACCATGGAGAAGGGAAACCGGTTCTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000256951.10
ENST00000396301.7
ENST00000431267.2
ENST00000536383.1
ENST00000538364.5
ENST00000544053.5
ENST00000546357.1
CDS GCA 72 bp ATGACACAGAAGATGATAGAGAGAATCATGAAGGCCTaGACTGTCTTGAGGGCATCTGAAGGGTCCCAGCGA +
Preference number: 6 (lower is better)
Translates to: MTQKMIERIMKA*TVLRASEGSQR
Trigger: TCGCTGGGACCCTTCAGATGCCCTCAAGACAGTGCAGGCCTTCATGATTCTCTCTATCATCTTCTGTGTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431267.2
CDS CCA 72 bp AGTTTTTCCAAAGACCTACTGATGCATCTACCGTATTaGAAACCAACCAGACCTGAAGGGTCCCAGCGACAG +
Preference number: 6 (lower is better)
Translates to: SFSKDLLMHLPY*KPTRPEGSQRQ
Trigger: CTGTCGCTGGGACCCTTCAGGTCTGGTTGGTTTCCAATACGGTAGATGCATCAGTAGGTCTTTGGAAAAACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544053.5
CDS CAA 90 bp AGGGCATCTTCACTGGCATATGACAGGCTGTCACTGCAGCTAATGTaGGTACAGTTTTTCCAAAGACCTACTGATGCATCTACCGTATTG +
Preference number: 6 (lower is better)
Translates to: RASSLAYDRLSLQLM*VQFFQRPTDASTVL
Trigger: CAATACGGTAGATGCATCAGTAGGTCTTTGGAAAAACTGTACCAACATTAGCTGCAGTGACAGCCTGTCATATGCCAGTGAAGATGCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000256951.10
ENST00000396301.7
ENST00000536383.1
ENST00000538364.5
ENST00000544053.5
ENST00000546357.1
CDS GCA 72 bp TGTTGCCAACCCAACCCAGTTACTCAATCGCTAGGCTaGCCCATGTTAAGTGCAAGTAATAAGATATCTGCT +
Preference number: 6 (lower is better)
Translates to: CCQPNPVTQSLG*PMLSASNKISA
Trigger: AGCAGATATCTTATTACTTGCACTTAACATGGGGCAGCCTAGCGATTGAGTAACTGGGTTGGGTTGGCAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535134.5
CDS TCA 72 bp GCAGCTAATGTTGGTACAGTTTTTCCAAAGACCTACTaGTGCATCTACCGTATTGGAAACCAACCAGACCTG +
Preference number: 6 (lower is better)
Translates to: AANVGTVFPKTY*CIYRIGNQPDL
Trigger: CAGGTCTGGTTGGTTTCCAATACGGTAGATGCATCAGTAGGTCTTTGGAAAAACTGTACCAACATTAGCTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000536383.1
ENST00000544053.5
ENST00000546357.1
CDS CAA 72 bp TCACTGGCATATGACAGGCTGTCACTGCAGCTAATGTaGGTACAGTTTTTCCAAAGACCTACTGATGCATCT +
Preference number: 6 (lower is better)
Translates to: SLAYDRLSLQLM*VQFFQRPTDAS
Trigger: AGATGCATCAGTAGGTCTTTGGAAAAACTGTACCAACATTAGCTGCAGTGACAGCCTGTCATATGCCAGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000256951.10
ENST00000396301.7
ENST00000536383.1
ENST00000537612.1
ENST00000538364.5
ENST00000544053.5
ENST00000546357.1
CDS CAA 90 bp AGTTCATCTTCACTGGCATATGACAGGCTGTCACTGCAGCTAATGTaGGTACAGTTTTTCCAAAGACCTACTGATGCATCTACCGTATTG +
Preference number: 6 (lower is better)
Translates to: SSSSLAYDRLSLQLM*VQFFQRPTDASTVL
Trigger: CAATACGGTAGATGCATCAGTAGGTCTTTGGAAAAACTGTACCAACATTAGCTGCAGTGACAGCCTGTCATATGCCAGTGAAGATGAACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537612.1
CDS CAA 72 bp CAGTTTTTCCAAAGACCTACTGATGCATCTACCGTATaGGAAACCAACCAGACATTGGCAATGGTGCTAACA +
Preference number: 6 (lower is better)
Translates to: QFFQRPTDASTV*ETNQTLAMVLT
Trigger: TGTTAGCACCATTGCCAATGTCTGGTTGGTTTCCAATACGGTAGATGCATCAGTAGGTCTTTGGAAAAACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000256951.10
ENST00000396301.7
ENST00000537612.1
ENST00000538364.5
CDS TCA 72 bp GCAGCTAATGTTGGTACAGTTTTTCCAAAGACCTACTaGTGCATCTACCGTATTGGAAACCAACCAGACATT +
Preference number: 6 (lower is better)
Translates to: AANVGTVFPKTY*CIYRIGNQPDI
Trigger: AATGTCTGGTTGGTTTCCAATACGGTAGATGCATCAGTAGGTCTTTGGAAAAACTGTACCAACATTAGCTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000256951.10
ENST00000396301.7
ENST00000537612.1
ENST00000538364.5
CDS CCA 72 bp AGTTTTTCCAAAGACCTACTGATGCATCTACCGTATTaGAAACCAACCAGACCTGAAACCAGAAGGAAAGAA +
Preference number: 6 (lower is better)
Translates to: SFSKDLLMHLPY*KPTRPETRRKE
Trigger: TTCTTTCCTTCTGGTTTCAGGTCTGGTTGGTTTCCAATACGGTAGATGCATCAGTAGGTCTTTGGAAAAACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000536383.1
ENST00000546357.1
CDS CAA 90 bp CAATCCAAGGTTCTCCACAAGAGAACAAATAACCAGAGGAGAAAATaGCACAAGGAAGTTTCACTGAACCATGTGCTAATCTGTTCAAGT +
Preference number: 6 (lower is better)
Translates to: QSKVLHKRTNNQRRK*HKEVSLNHVLICSS
Trigger: ACTTGAACAGATTAGCACATGGTTCAGTGAAACTTCCTTGTGCAATTTTCTCCTCTGGTTATTTGTTCTCTTGTGGAGAACCTTGGATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000544053.5
ENST00000546357.1