RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EML6 (Homo sapiens)

Ensembl gene IDs: ENSG00000214595

Ensembl transcript IDs: ENST00000356458.7, ENST00000490828.5, ENST00000491655.1, ENST00000493997.1, ENST00000673655.1, ENST00000673695.1, ENST00000673746.1, ENST00000673905.1, ENST00000673912.1, ENST00000673916.1, ENST00000674035.1

Found 1215 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CAGCCAGGTCCCAGATCCGGGCTGTGCCATCGTTGCTGGCAGAGATaGAGAGGTCCTTGGAAGGGTGAGTGGCCAGGCCCCAGATCTCCC +
Preference number: 1 (lower is better)
Translates to: QPGPRSGLCHRCWQR*RGPWKGEWPGPRSP
Trigger: GGGAGATCTGGGGCCTGGCCACTCACCCTTCCAAGGACCTCTTCATCTCTGCCAGCAACGATGGCACAGCCCGGATCTGGGACCTGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR TCA 90 bp GTGTCTGAGTCGGGGCGAAATTCCACCACAAATATGCGCTCCAGGTaGCCCCCTCGGCTGGCAACCTTGGCACCTTCCTGCCATCGCCAG +
Preference number: 1 (lower is better)
Translates to: VSESGRNSTTNMRSR*PPRLATLAPSCHRQ
Trigger: CTGGCGATGGCAGGAAGGTGCCAAGGTTGCCAGCCGAGGGGGTCACCTGGAGCGCATATTTGTGGTGGAATTTCGCCCCGACTCAGACAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR TCA 90 bp AGTCCATCCCGAAGGGTTGTGTACATTGTGAACACGGGGCCTGTGTaGGCCTTGGCCACCAGCCGGATGAGGAAGTGGTCCTTCCAGACG +
Preference number: 1 (lower is better)
Translates to: SPSRRVVYIVNTGPV*ALATSRMRKWSFQT
Trigger: CGTCTGGAAGGACCACTTCCTCATCCGGCTGGTGGCCAAGGCTCACACAGGCCCCGTGTTCACAATGTACACAACCCTTCGGGATGGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR GCA 90 bp GGTGTGCTCAGGGTCCACTCCCACCGACACCAGGAGCTTTCCAGTTaGACTGAAGTTGATGTAATTCACCCCCTTGGAGTGGAAGCACCG +
Preference number: 1 (lower is better)
Translates to: GVLRVHSHRHQELSS*TEVDVIHPLGVEAP
Trigger: CGGTGCTTCCACTCCAAGGGGGTGAATTACATCAACTTCAGTGCAACTGGAAAGCTCCTGGTGTCGGTGGGAGTGGACCCTGAGCACACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR GCA 90 bp ATACAAACTGCGTGTCTGAGTCGGGGCGAAATTCCACCACAAATATaGGCTCCAGGTGACCCCCTCGGCTGGCAACCTTGGCACCTTCCT +
Preference number: 1 (lower is better)
Translates to: IQTACLSRGEIPPQI*APGDPLGWQPWHLP
Trigger: AGGAAGGTGCCAAGGTTGCCAGCCGAGGGGGTCACCTGGAGCGCATATTTGTGGTGGAATTTCGCCCCGACTCAGACACGCAGTTTGTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR CCA 90 bp CCTTGGAGTGGAAGCACCGCAGCATGGAGAGGGTGTGTTTGGTCATaGCGTCCCATATGTGGATGGAAGGTGTTGTCCCTATCTGGCTGG +
Preference number: 1 (lower is better)
Translates to: PWSGSTAAWRGCVWS*RPICGWKVLSLSGW
Trigger: CCAGCCAGATAGGGACAACACCTTCCATCCACATATGGGACGCCATGACCAAACACACCCTCTCCATGCTGCGGTGCTTCCACTCCAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR TCA 90 bp GGGAGAGAAAAGGAAGCTTTGTCAATGCTTCCCGCACACTCTCCGTaGCTTTACGAATGCGCCCGGGGACTCTGCTTAGAGTGTGCTGGG +
Preference number: 1 (lower is better)
Translates to: GREKEALSMLPAHSP*LYECARGLCLECAG
Trigger: CCCAGCACACTCTAAGCAGAGTCCCCGGGCGCATTCGTAAAGTCACGGAGAGTGTGCGGGAAGCATTGACAAAGCTTCCTTTTCTCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR CCA 90 bp TCACCCCCTTGGAGTGGAAGCACCGCAGCATGGAGAGGGTGTGTTTaGTCATGGCGTCCCATATGTGGATGGAAGGTGTTGTCCCTATCT +
Preference number: 1 (lower is better)
Translates to: SPPWSGSTAAWRGCV*SWRPICGWKVLSLS
Trigger: AGATAGGGACAACACCTTCCATCCACATATGGGACGCCATGACCAAACACACCCTCTCCATGCTGCGGTGCTTCCACTCCAAGGGGGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR GCA 90 bp GAAGCTCTGGCTCCCTGTGGAGAGGTTCTGAACGATGCCAGCCGCTaGTGTGTGGAAGATGATGTCAGCGCCATCATTAAGGTAATGCAG +
Preference number: 1 (lower is better)
Translates to: EALAPCGEVLNDASR*CVEDDVSAIIKVMQ
Trigger: CTGCATTACCTTAATGATGGCGCTGACATCATCTTCCACACAGCAGCGGCTGGCATCGTTCAGAACCTCTCCACAGGGAGCCAGAGCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR GCA 90 bp GTTGTCCCTATCTGGCTGGTGGCCACCACGTTTCTGTACTTGGGGTaGTGGTTCACTGTGAGACAGAGGATGTCATCTGTGTGCTCCAGA +
Preference number: 1 (lower is better)
Translates to: VVPIWLVATTFLYLG*WFTVRQRMSSVCSR
Trigger: TCTGGAGCACACAGATGACATCCTCTGTCTCACAGTGAACCAGCACCCCAAGTACAGAAACGTGGTGGCCACCAGCCAGATAGGGACAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR GCA 90 bp AGATTATGGGAGCAGTTGTGTAACTTCTGCAGCGTTTTGAGCTTGTaGATCCGGGGCAGCATGGTAGGCATTTCCCAACGGCTGGTGGCA +
Preference number: 1 (lower is better)
Translates to: RLWEQLCNFCSVLSL*IRGSMVGISQRLVA
Trigger: TGCCACCAGCCGTTGGGAAATGCCTACCATGCTGCCCCGGATGCACAAGCTCAAAACGCTGCAGAAGTTACACAACTGCTCCCATAATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
3UTR TCA 90 bp GATGTCTTTCATTTAGGAAGCCTTGGCGTGAACACAGGACAAGGGTaGCACACTGAATCTGCTAAGGGTCCTGCAGCCCTCCTCAGCTTT +
Preference number: 1 (lower is better)
Translates to: DVFHLGSLGVNTGQG*HTESAKGPAALLSF
Trigger: AAAGCTGAGGAGGGCTGCAGGACCCTTAGCAGATTCAGTGTGTCACCCTTGTCCTGTGTTCACGCCAAGGCTTCCTAAATGAAAGACATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
3UTR TCA 90 bp CTGTCAGCCACATCCTGTAGTCACTGGTCAGCTACATGGAAAGTGTaGCTGAGGGGCTTACGGATGGCTTCTGGTAAAGATTGTCCAAGT +
Preference number: 1 (lower is better)
Translates to: LSATSCSHWSATWKV*LRGLRMASGKDCPS
Trigger: ACTTGGACAATCTTTACCAGAAGCCATCCGTAAGCCCCTCAGTCACACTTTCCATGTAGCTGACCAGTGACTACAGGATGTGGCTGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
3UTR TCA 90 bp AGCCGCATTAGCAACCACCTCATTCATGCACAAGCATTTTCCAAGTaGACAGACATTCCTGTGTGGCACACACCATGCTTCCCCAGCATG +
Preference number: 1 (lower is better)
Translates to: SRISNHLIHAQAFSK*TDIPVWHTPCFPSM
Trigger: CATGCTGGGGAAGCATGGTGTGTGCCACACAGGAATGTCTGTTCACTTGGAAAATGCTTGTGCATGAATGAGGTGGTTGCTAATGCGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR TCA 90 bp CAGCCACATCCTGTAGTCACTGGTCAGCTACATGGAAAGTGTGACTaGGGGGCTTACGGATGGCTTCTGGTAAAGATTGTCCAAGTCATA +
Preference number: 1 (lower is better)
Translates to: QPHPVVTGQLHGKCD*GAYGWLLVKIVQVI
Trigger: TATGACTTGGACAATCTTTACCAGAAGCCATCCGTAAGCCCCTCAGTCACACTTTCCATGTAGCTGACCAGTGACTACAGGATGTGGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
3UTR CCA 90 bp CTTGACCTTCCTTCGTGGCATCACGGTTTTGGAGAGTCCAGATTATaGGAGCAGTTGTGTAACTTCTGCAGCGTTTTGAGCTTGTGCATC +
Preference number: 1 (lower is better)
Translates to: LDLPSWHHGFGESRL*EQLCNFCSVLSLCI
Trigger: GATGCACAAGCTCAAAACGCTGCAGAAGTTACACAACTGCTCCCATAATCTGGACTCTCCAAAACCGTGATGCCACGAAGGAAGGTCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
3UTR TCA 90 bp CACCTAAGAACGTTTAAGTGTATGACAAAAGCAAGCCAGGGGCTATaGGGAGAGCAAGAGGACACTGGAACTATGGCATGGCTCATAAGG +
Preference number: 1 (lower is better)
Translates to: HLRTFKCMTKASQGL*GEQEDTGTMAWLIR
Trigger: CCTTATGAGCCATGCCATAGTTCCAGTGTCCTCTTGCTCTCCTCATAGCCCCTGGCTTGCTTTTGTCATACACTTAAACGTTCTTAGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR GCA 90 bp ACTCTGCATCACCAGTCACATGGTTACAGAAAACAGAATTGGGACTaGATAGGGACTCTACTGCGGGCCCAACAACCTATTAGTGGATTG +
Preference number: 1 (lower is better)
Translates to: TLHHQSHGYRKQNWD*IGTLLRAQQPISGL
Trigger: CAATCCACTAATAGGTTGTTGGGCCCGCAGTAGAGTCCCTATGCAGTCCCAATTCTGTTTTCTGTAACCATGTGACTGGTGATGCAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
3UTR CCA 90 bp AGTGCACCAGTCTACAAATTCAGAAAGCTCATACCCTGGCGTCTCTaGGCAAACTCTGCACTAAAGCGCCTACAGAATAGGGAGAGAAAA +
Preference number: 1 (lower is better)
Translates to: SAPVYKFRKLIPWRL*ANSALKRLQNRERK
Trigger: TTTTCTCTCCCTATTCTGTAGGCGCTTTAGTGCAGAGTTTGCCCAGAGACGCCAGGGTATGAGCTTTCTGAATTTGTAGACTGGTGCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR CCA 90 bp CTCCTCAGCTTTGAGGTTTTAGCACCATATGGAGAAAGGAGAAATTaGTGGGAGGTGAGACAGCAGCCCACACAACTGGAAACTTTCAAA +
Preference number: 1 (lower is better)
Translates to: LLSFEVLAPYGERRN*WEVRQQPTQLETFK
Trigger: TTTGAAAGTTTCCAGTTGTGTGGGCTGCTGTCTCACCTCCCACCAATTTCTCCTTTCTCCATATGGTGCTAAAACCTCAAAGCTGAGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
3UTR CCA 90 bp GTTATCACTCTGCATCACCAGTCACATGGTTACAGAAAACAGAATTaGGACTGCATAGGGACTCTACTGCGGGCCCAACAACCTATTAGT +
Preference number: 1 (lower is better)
Translates to: VITLHHQSHGYRKQN*DCIGTLLRAQQPIS
Trigger: ACTAATAGGTTGTTGGGCCCGCAGTAGAGTCCCTATGCAGTCCCAATTCTGTTTTCTGTAACCATGTGACTGGTGATGCAGAGTGATAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
3UTR GCA 90 bp GACATCATCGCCACCAAATTGAGCAAAATCGGGAGACTGGGGGCATaGCAGTTCTCACAATTAGACACTTCCTTCACATTAATTATCGCT +
Preference number: 1 (lower is better)
Translates to: DIIATKLSKIGRLGA*QFSQLDTSFTLIIA
Trigger: AGCGATAATTAATGTGAAGGAAGTGTCTAATTGTGAGAACTGGCATGCCCCCAGTCTCCCGATTTTGCTCAATTTGGTGGCGATGATGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR CCA 90 bp TACAAGATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATaGTTACAGAAAACAGAATTGGGACTGCATAGGGACTCTACTGCG +
Preference number: 1 (lower is better)
Translates to: YKIGRHGYHSASPVT*LQKTELGLHRDSTA
Trigger: CGCAGTAGAGTCCCTATGCAGTCCCAATTCTGTTTTCTGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATCTTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
3UTR TCA 90 bp CAAATGCAAGTAGCCAGTAACTGTAGGTCTAGAATTTTCGTTCACTaGCCAGAAGGACTAATAGGCGTCTATGTGCTCAGAACCACCAGT +
Preference number: 1 (lower is better)
Translates to: QMQVASNCRSRIFVH*PEGLIGVYVLRTTS
Trigger: ACTGGTGGTTCTGAGCACATAGACGCCTATTAGTCCTTCTGGTCAGTGAACGAAAATTCTAGACCTACAGTTACTGGCTACTTGCATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
3UTR CCA 90 bp TTGTGGCAAATTCAGCGGATTTTAAGTATTGACCCTTCGCGGTTGTaGATTCTGCGTGAACACTTAGTACTGGATGTTCACCAAACACCT +
Preference number: 1 (lower is better)
Translates to: LWQIQRILSIDPSRL*ILREHLVLDVHQTP
Trigger: AGGTGTTTGGTGAACATCCAGTACTAAGTGTTCACGCAGAATCCACAACCGCGAAGGGTCAATACTTAAAATCCGCTGAATTTGCCACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR GCA 90 bp AGCATGAAGAGTCTAGTACAAGATAGGCAGACATGGTTATCACTCTaGATCACCAGTCACATGGTTACAGAAAACAGAATTGGGACTGCA +
Preference number: 1 (lower is better)
Translates to: SMKSLVQDRQTWLSL*ITSHMVTENRIGTA
Trigger: TGCAGTCCCAATTCTGTTTTCTGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATCTTGTACTAGACTCTTCATGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
3UTR CCA 90 bp CAAGATCCGATCAGCATGAAGAGTCTAGTACAAGATAGGCAGACATaGTTATCACTCTGCATCACCAGTCACATGGTTACAGAAAACAGA +
Preference number: 1 (lower is better)
Translates to: QDPISMKSLVQDRQT*LSLCITSHMVTENR
Trigger: TCTGTTTTCTGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATCTTGTACTAGACTCTTCATGCTGATCGGATCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
3UTR-3UTR TCA 90 bp ATCTCCCAGGACGCTTGTCCAGGAGGCCCAGGTGATCTTCTCAATGACCACGGCCCTGTGGAGAGGTTCTaGACGATGCCAGCCGCTGCT +
Preference number: 2 (lower is better)
Translates to: ISQDACPGGPGDLLNDHGPVERF*TMPAAA
Trigger: AGCAGCGGCTGGCATCGTTCAGAACCTCTCCACAGG...GCCGTGGTCATTGAGAAGATCACCTGGGCCTCCTGGACAAGCGTCCTGGGAGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR-3UTR GCA 90 bp ATCTCCCAGGACGCTTGTCCAGGAGGCCCAGGTGATCTTCTCAATGACCACGGCCAGACAGTGATGGTGTaGTCAGGGTCCACTCCCACC +
Preference number: 2 (lower is better)
Translates to: ISQDACPGGPGDLLNDHGQTVMV*SGSTPT
Trigger: GGTGGGAGTGGACCCTGAGCACACCATCACTGTCTG...GCCGTGGTCATTGAGAAGATCACCTGGGCCTCCTGGACAAGCGTCCTGGGAGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR-3UTR CCA 90 bp ATCTCCCAGGACGCTTGTCCAGGAGGCCCAGGTGATCTTCTCAATGACCACGGCTTTCCCAACGGCTGGTaGCAAGGAGGCACCTCAGCA +
Preference number: 2 (lower is better)
Translates to: ISQDACPGGPGDLLNDHGFPNGW*QGGTSA
Trigger: TGCTGAGGTGCCTCCTTGCCACCAGCCGTTGGGAAA...GCCGTGGTCATTGAGAAGATCACCTGGGCCTCCTGGACAAGCGTCCTGGGAGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR-3UTR TCA 90 bp TCTGGCTCCCTGTGGAGAGGTTCTGAACGATGCCAGCCGCTGCTGTGTGGAAGAAACGACACCCCCGGCTaGCATCATCGCCACCAAATT +
Preference number: 2 (lower is better)
Translates to: SGSLWRGSERCQPLLCGRNDTPG*HHRHQI
Trigger: AATTTGGTGGCGATGATGTCAGCCGGGGGTGTCGTT...TCTTCCACACAGCAGCGGCTGGCATCGTTCAGAACCTCTCCACAGGGAGCCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR-3UTR CCA 90 bp ATATGCGCTCCAGGTGACCCCCTCGGCTGGCAACCTTGGCACCTTCCTGCCATCAGAAAGCTCATACCCTaGCGTCTCTGGGCAAACTCT +
Preference number: 2 (lower is better)
Translates to: ICAPGDPLGWQPWHLPAIRKLIP*RLWANS
Trigger: AGAGTTTGCCCAGAGACGCCAGGGTATGAGCTTTCT...GATGGCAGGAAGGTGCCAAGGTTGCCAGCCGAGGGGGTCACCTGGAGCGCATAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR-3UTR TCA 90 bp ATCATAAGAGAAACGGATGTTCGTCACGTGAGCCGAGTGACCGAAGTATCGCTTTGCCCGGTCTCCAGCTaGAAGGCCCGGCAGCGCTTC +
Preference number: 2 (lower is better)
Translates to: IIRETDVRHVSRVTEVSLCPVSS*KARQRF
Trigger: GAAGCGCTGCCGGGCCTTTCAGCTGGAGACCGGGCA...AAGCGATACTTCGGTCACTCGGCTCACGTGACGAACATCCGTTTCTCTTATGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR-3UTR GCA 90 bp GTTGATGTAATTCACCCCCTTGGAGTGGAAGCACCGCAGCATGGAGAGGGTGTGCCTCAGCATGGCCTCTaGAGTTGCTGGCTGGTAGCA +
Preference number: 2 (lower is better)
Translates to: VDVIHPLGVEAPQHGEGVPQHGL*SCWLVA
Trigger: TGCTACCAGCCAGCAACTGCAGAGGCCATGCTGAGG...CACACCCTCTCCATGCTGCGGTGCTTCCACTCCAAGGGGGTGAATTACATCAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR-3UTR CCA 90 bp CTTGTCAGCCAGGTCCCAGATCCGGGCTGTGCCATCGTTGCTGGCAGAGATGAAACAGACATTCCTGTGTaGCACACACCATGCTTCCCC +
Preference number: 2 (lower is better)
Translates to: LVSQVPDPGCAIVAGRDETDIPV*HTPCFP
Trigger: GGGGAAGCATGGTGTGTGCCACACAGGAATGTCTGT...TTCATCTCTGCCAGCAACGATGGCACAGCCCGGATCTGGGACCTGGCTGACAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR-3UTR CCA 90 bp ATCTCCCAGGACGCTTGTCCAGGAGGCCCAGGTGATCTTCTCAATGACCACGGCTGTAATTCACCCCCTTaGAGTGGAAGCACCGCAGCA +
Preference number: 2 (lower is better)
Translates to: ISQDACPGGPGDLLNDHGCNSPP*SGSTAA
Trigger: TGCTGCGGTGCTTCCACTCCAAGGGGGTGAATTACA...GCCGTGGTCATTGAGAAGATCACCTGGGCCTCCTGGACAAGCGTCCTGGGAGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR CAA 90 bp TTCACCCCCTTGGAGTGGAAGCACCGCAGCATGGAGAGGGTGTGTTaGGTCATGGCGTCCCATATGTGGATGGAAGGTGTTGTCCCTATC +
Preference number: 2 (lower is better)
Translates to: FTPLEWKHRSMERVC*VMASHMWMEGVVPI
Trigger: GATAGGGACAACACCTTCCATCCACATATGGGACGCCATGACCAAACACACCCTCTCCATGCTGCGGTGCTTCCACTCCAAGGGGGTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR-3UTR TCA 90 bp AATGAAGTCACCTCAACTCCACTCAGGGTGGTACACCAAGGTGCAGCCTTGGGTGCAAGCCAGGGGCTATaGGGAGAGCAAGAGGACACT +
Preference number: 2 (lower is better)
Translates to: NEVTSTPLRVVHQGAALGASQGL*GEQEDT
Trigger: AGTGTCCTCTTGCTCTCCTCATAGCCCCTGGCTTGC...ACCCAAGGCTGCACCTTGGTGTACCACCCTGAGTGGAGTTGAGGTGACTTCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR-3UTR CCA 90 bp ATATGCGCTCCAGGTGACCCCCTCGGCTGGCAACCTTGGCACCTTCCTGCCATCGGAGAGTCCAGATTATaGGAGCAGTTGTGTAACTTC +
Preference number: 2 (lower is better)
Translates to: ICAPGDPLGWQPWHLPAIGESRL*EQLCNF
Trigger: GAAGTTACACAACTGCTCCCATAATCTGGACTCTCC...GATGGCAGGAAGGTGCCAAGGTTGCCAGCCGAGGGGGTCACCTGGAGCGCATAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR-3UTR CCA 90 bp AGATTGTTAGCACCGAAGGCCACGGAGAGCATCGTCTGCATTTTGGCAGCTCCCGCCTGCCTGCTCGAATaGCTTGCGGGGGTTCTTTTT +
Preference number: 2 (lower is better)
Translates to: RLLAPKATESIVCILAAPACLLE*LAGVLF
Trigger: AAAAAGAACCCCCGCAAGCCATTCGAGCAGGCAGGC...GGGAGCTGCCAAAATGCAGACGATGCTCTCCGTGGCCTTCGGTGCTAACAATCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR-3UTR CCA 90 bp CTTGTCAGCCAGGTCCCAGATCCGGGCTGTGCCATCGTTGCTGGCAGAGATGAAATACCCTGGCGTCTCTaGGCAAACTCTGCACTAAAG +
Preference number: 2 (lower is better)
Translates to: LVSQVPDPGCAIVAGRDEIPWRL*ANSALK
Trigger: CTTTAGTGCAGAGTTTGCCCAGAGACGCCAGGGTAT...TTCATCTCTGCCAGCAACGATGGCACAGCCCGGATCTGGGACCTGGCTGACAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR-3UTR TCA 90 bp AGATTGTTAGCACCGAAGGCCACGGAGAGCATCGTCTGCATTTTGGCAGCTCCCCATGGAAAGTGTGACTaGGGGGCTTACGGATGGCTT +
Preference number: 2 (lower is better)
Translates to: RLLAPKATESIVCILAAPHGKCD*GAYGWL
Trigger: AAGCCATCCGTAAGCCCCTCAGTCACACTTTCCATG...GGGAGCTGCCAAAATGCAGACGATGCTCTCCGTGGCCTTCGGTGCTAACAATCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR-3UTR TCA 90 bp CTTGTCAGCCAGGTCCCAGATCCGGGCTGTGCCATCGTTGCTGGCAGAGATGAAGCGGATTTTAAGTATTaGCCCTTCGCGGTTGTGGAT +
Preference number: 2 (lower is better)
Translates to: LVSQVPDPGCAIVAGRDEADFKY*PFAVVD
Trigger: ATCCACAACCGCGAAGGGTCAATACTTAAAATCCGC...TTCATCTCTGCCAGCAACGATGGCACAGCCCGGATCTGGGACCTGGCTGACAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR-3UTR TCA 90 bp AGAGGCTTCTGGCATTTTACAGACATCGCCACACAAATACACTGCAGTCGTCTCCCCGCACACTCTCCGTaGCTTTACGAATGCGCCCGG +
Preference number: 2 (lower is better)
Translates to: RGFWHFTDIATQIHCSRLPAHSP*LYECAR
Trigger: CCGGGCGCATTCGTAAAGTCACGGAGAGTGTGCGGG...GAGACGACTGCAGTGTATTTGTGTGGCGATGTCTGTAAAATGCCAGAAGCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR-3UTR TCA 90 bp ATCATAAGAGAAACGGATGTTCGTCACGTGAGCCGAGTGACCGAAGTATCGCTTAATATGCGCTCCAGGTaGCCCCCTCGGCTGGCAACC +
Preference number: 2 (lower is better)
Translates to: IIRETDVRHVSRVTEVSLNMRSR*PPRLAT
Trigger: GGTTGCCAGCCGAGGGGGTCACCTGGAGCGCATATT...AAGCGATACTTCGGTCACTCGGCTCACGTGACGAACATCCGTTTCTCTTATGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR-3UTR CCA 90 bp AGTGGCCAGGCCCCAGATCTCCCCTTCCATGTGACCATCAATCAGGATGTTAGACAACTCCACTCAGGGTaGTACACCAAGGTGCAGCCT +
Preference number: 2 (lower is better)
Translates to: SGQAPDLPFHVTINQDVRQLHSG*YTKVQP
Trigger: AGGCTGCACCTTGGTGTACCACCCTGAGTGGAGTTG...TCTAACATCCTGATTGATGGTCACATGGAAGGGGAGATCTGGGGCCTGGCCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR CAA 90 bp TCCAGATTATGGGAGCAGTTGTGTAACTTCTGCAGCGTTTTGAGCTaGTGCATCCGGGGCAGCATGGTAGGCATTTCCCAACGGCTGGTG +
Preference number: 2 (lower is better)
Translates to: SRLWEQLCNFCSVLS*CIRGSMVGISQRLV
Trigger: CACCAGCCGTTGGGAAATGCCTACCATGCTGCCCCGGATGCACAAGCTCAAAACGCTGCAGAAGTTACACAACTGCTCCCATAATCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
3UTR CAA 90 bp GGAGAGTCCAGATTATGGGAGCAGTTGTGTAACTTCTGCAGCGTTTaGAGCTTGTGCATCCGGGGCAGCATGGTAGGCATTTCCCAACGG +
Preference number: 2 (lower is better)
Translates to: GESRLWEQLCNFCSV*SLCIRGSMVGISQR
Trigger: CCGTTGGGAAATGCCTACCATGCTGCCCCGGATGCACAAGCTCAAAACGCTGCAGAAGTTACACAACTGCTCCCATAATCTGGACTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
3UTR-3UTR TCA 90 bp AACTCCCATCGTTCAAGCCAACCGCTAAGGCTTTCCCATCAGGGGAAAAGGCACGCAGTAGATGTCCTCTaGGGCTCCAGGGTACTTTGT +
Preference number: 2 (lower is better)
Translates to: NSHRSSQPLRLSHQGKRHAVDVL*GSRVLC
Trigger: ACAAAGTACCCTGGAGCCTCAGAGGACATCTACTGC...GTGCCTTTTCCCCTGATGGGAAAGCCTTAGCGGTTGGCTTGAACGATGGGAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673916.1
3UTR-3UTR GCA 90 bp AATGAAGTCACCTCAACTCCACTCAGGGTGGTACACCAAGGTGCAGCCTTGGGTAGCGTTTTGAGCTTGTaGATCCGGGGCAGCATGGTA +
Preference number: 2 (lower is better)
Translates to: NEVTSTPLRVVHQGAALGSVLSL*IRGSMV
Trigger: TACCATGCTGCCCCGGATGCACAAGCTCAAAACGCT...ACCCAAGGCTGCACCTTGGTGTACCACCCTGAGTGGAGTTGAGGTGACTTCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
3UTR-3UTR GCA 90 bp TGCTGCTCACCTTCCCATAAGCAGGTAACCGATGTCTTTCATTTAGGAAGCCTTTGCGCCCGGGGACTCTaGTTAGAGTGTGCTGGGGAG +
Preference number: 2 (lower is better)
Translates to: CCSPSHKQVTDVFHLGSLCARGL*LECAGE
Trigger: CTCCCCAGCACACTCTAAGCAGAGTCCCCGGGCGCA...AAGGCTTCCTAAATGAAAGACATCGGTTACCTGCTTATGGGAAGGTGAGCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR-3UTR GCA 90 bp GTTGATGTAATTCACCCCCTTGGAGTGGAAGCACCGCAGCATGGAGAGGGTGTGAGGAAGCTTTGTCAATaGTTCCCGCACACTCTCCGT +
Preference number: 2 (lower is better)
Translates to: VDVIHPLGVEAPQHGEGVRKLCQ*FPHTLR
Trigger: ACGGAGAGTGTGCGGGAAGCATTGACAAAGCTTCCT...CACACCCTCTCCATGCTGCGGTGCTTCCACTCCAAGGGGGTGAATTACATCAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR-3UTR GCA 90 bp TCTCCGTCTTTGGTTCCCACTAAGATTTTTCCTTTTCCACGGCACACGGAGCGCCCGACAGATACAAACTaGGTGTCTGAGTCGGGGCGA +
Preference number: 2 (lower is better)
Translates to: SPSLVPTKIFPFPRHTERPTDTN*VSESGR
Trigger: TCGCCCCGACTCAGACACGCAGTTTGTATCTGTCGG...GCGCTCCGTGTGCCGTGGAAAAGGAAAAATCTTAGTGGGAACCAAAGACGGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR-3UTR CCA 90 bp TGCTGCTCACCTTCCCATAAGCAGGTAACCGATGTCTTTCATTTAGGAAGCCTTCTCGGCTGGCAACCTTaGCACCTTCCTGCCATCGCC +
Preference number: 2 (lower is better)
Translates to: CCSPSHKQVTDVFHLGSLLGWQP*HLPAIA
Trigger: GGCGATGGCAGGAAGGTGCCAAGGTTGCCAGCCGAG...AAGGCTTCCTAAATGAAAGACATCGGTTACCTGCTTATGGGAAGGTGAGCAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR-3UTR TCA 90 bp TGTCAGCATTTACCACCAGGAAACTCCCATCGTTCAAGCCAACCGCTAAGGCTTGGTGGAAGGATCACTTaGGCTTTGGAGGTGGAGGGT +
Preference number: 2 (lower is better)
Translates to: CQHLPPGNSHRSSQPLRLGGRIT*ALEVEG
Trigger: ACCCTCCACCTCCAAAGCTCAAGTGATCCTTCCACC...AAGCCTTAGCGGTTGGCTTGAACGATGGGAGTTTCCTGGTGGTAAATGCTGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673655.1
3UTR-3UTR GCA 90 bp GATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACAGAAAACGTAGGTCAGCCTGCCTaGTCGAATGGCTTGCGGGGG +
Preference number: 2 (lower is better)
Translates to: DRQTWLSLCITSHMVTENVGQPA*SNGLRG
Trigger: CCCCCGCAAGCCATTCGAGCAGGCAGGCTGACCTAC...GTTTTCTGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR-3UTR CCA 90 bp TGCTGCTCACCTTCCCATAAGCAGGTAACCGATGTCTTTCATTTAGGAAGCCTTGGAGGCACCTCAGCATaGCCTCTGCAGTTGCTGGCT +
Preference number: 2 (lower is better)
Translates to: CCSPSHKQVTDVFHLGSLGGTSA*PLQLLA
Trigger: AGCCAGCAACTGCAGAGGCCATGCTGAGGTGCCTCC...AAGGCTTCCTAAATGAAAGACATCGGTTACCTGCTTATGGGAAGGTGAGCAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
3UTR-3UTR CCA 90 bp TTTCGTTCACTGACCAGAAGGACTAATAGGCGTCTATGTGCTCAGAACCACCAGGCATTTCCCAACGGCTaGTGGCAAGGAGGCACCTCA +
Preference number: 2 (lower is better)
Translates to: FRSLTRRTNRRLCAQNHQAFPNG*WQGGTS
Trigger: TGAGGTGCCTCCTTGCCACCAGCCGTTGGGAAATGC...CTGGTGGTTCTGAGCACATAGACGCCTATTAGTCCTTCTGGTCAGTGAACGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
3UTR-3UTR CCA 90 bp AGAGGCTTCTGGCATTTTACAGACATCGCCACACAAATACACTGCAGTCGTCTCGCATTTCCCAACGGCTaGTGGCAAGGAGGCACCTCA +
Preference number: 2 (lower is better)
Translates to: RGFWHFTDIATQIHCSRLAFPNG*WQGGTS
Trigger: TGAGGTGCCTCCTTGCCACCAGCCGTTGGGAAATGC...GAGACGACTGCAGTGTATTTGTGTGGCGATGTCTGTAAAATGCCAGAAGCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR-3UTR CCA 90 bp GTTGATGTAATTCACCCCCTTGGAGTGGAAGCACCGCAGCATGGAGAGGGTGTGCGTCCCATATGTGGATaGAAGGTGTTGTCCCTATCT +
Preference number: 2 (lower is better)
Translates to: VDVIHPLGVEAPQHGEGVRPICG*KVLSLS
Trigger: AGATAGGGACAACACCTTCCATCCACATATGGGACG...CACACCCTCTCCATGCTGCGGTGCTTCCACTCCAAGGGGGTGAATTACATCAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR-3UTR TCA 90 bp TTTCGTTCACTGACCAGAAGGACTAATAGGCGTCTATGTGCTCAGAACCACCAGACTTCTGCAGCGTTTTaGGCTTGTGCATCCGGGGCA +
Preference number: 2 (lower is better)
Translates to: FRSLTRRTNRRLCAQNHQTSAAF*ACASGA
Trigger: TGCCCCGGATGCACAAGCTCAAAACGCTGCAGAAGT...CTGGTGGTTCTGAGCACATAGACGCCTATTAGTCCTTCTGGTCAGTGAACGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
3UTR-3UTR GCA 90 bp TGCTGCTCACCTTCCCATAAGCAGGTAACCGATGTCTTTCATTTAGGAAGCCTTACGGCTTCAGTTACCTaGTTCCCCAGGGGGACCTCA +
Preference number: 2 (lower is better)
Translates to: CCSPSHKQVTDVFHLGSLTASVT*FPRGTS
Trigger: TGAGGTCCCCCTGGGGAAGCAGGTAACTGAAGCCGT...AAGGCTTCCTAAATGAAAGACATCGGTTACCTGCTTATGGGAAGGTGAGCAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR-3UTR CCA 90 bp AATTTTCGTTCACTGACCAGAAGGACTAATAGGCGTCTATGTGCTCAGAACCACGGAGGCACCTCAGCATaGCCTCTGCAGTTGCTGGCT +
Preference number: 2 (lower is better)
Translates to: NFRSLTRRTNRRLCAQNHGGTSA*PLQLLA
Trigger: AGCCAGCAACTGCAGAGGCCATGCTGAGGTGCCTCC...GTGGTTCTGAGCACATAGACGCCTATTAGTCCTTCTGGTCAGTGAACGAAAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
3UTR-3UTR CCA 90 bp GAGCATCGTCTGCATTTTGGCAGCTCCCAGGGACCCGATGACCCCTTTCTTGTAACCAAGGTGCAGCCTTaGGTTACCCTCATTTATCTT +
Preference number: 2 (lower is better)
Translates to: EHRLHFGSSQGPDDPFLVTKVQP*VTLIYL
Trigger: AAGATAAATGAGGGTAACCCAAGGCTGCACCTTGGT...TACAAGAAAGGGGTCATCGGGTCCCTGGGAGCTGCCAAAATGCAGACGATGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR-3UTR CCA 90 bp TTTCGTTCACTGACCAGAAGGACTAATAGGCGTCTATGTGCTCAGAACCACCAGCAACTCCACTCAGGGTaGTACACCAAGGTGCAGCCT +
Preference number: 2 (lower is better)
Translates to: FRSLTRRTNRRLCAQNHQQLHSG*YTKVQP
Trigger: AGGCTGCACCTTGGTGTACCACCCTGAGTGGAGTTG...CTGGTGGTTCTGAGCACATAGACGCCTATTAGTCCTTCTGGTCAGTGAACGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
3UTR-3UTR CCA 90 bp AGATTGTTAGCACCGAAGGCCACGGAGAGCATCGTCTGCATTTTGGCAGCTCCCACATCCTGTAGTCACTaGTCAGCTACATGGAAAGTG +
Preference number: 2 (lower is better)
Translates to: RLLAPKATESIVCILAAPTSCSH*SATWKV
Trigger: CACTTTCCATGTAGCTGACCAGTGACTACAGGATGT...GGGAGCTGCCAAAATGCAGACGATGCTCTCCGTGGCCTTCGGTGCTAACAATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR-3UTR CCA 90 bp ACCACCAGGAAACTCCCATCGTTCAAGCCAACCGCTAAGGCTTTCCCATCAGGGCTGTCACGCGAAGAATaGAATCTGAACATTCTCCCA +
Preference number: 2 (lower is better)
Translates to: TTRKLPSFKPTAKAFPSGLSREE*NLNILP
Trigger: TGGGAGAATGTTCAGATTCCATTCTTCGCGTGACAG...CCCTGATGGGAAAGCCTTAGCGGTTGGCTTGAACGATGGGAGTTTCCTGGTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673746.1
3UTR-3UTR CCA 90 bp GTTGATGTAATTCACCCCCTTGGAGTGGAAGCACCGCAGCATGGAGAGGGTGTGTCTTCCTGGATGTCGTaGGGAGTTATGTACAATGGA +
Preference number: 2 (lower is better)
Translates to: VDVIHPLGVEAPQHGEGVSSWMS*GVMYNG
Trigger: TCCATTGTACATAACTCCCCACGACATCCAGGAAGA...CACACCCTCTCCATGCTGCGGTGCTTCCACTCCAAGGGGGTGAATTACATCAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR-3UTR CCA 90 bp CACATACTTGTCATCATAAGAGAAACGGATGTTCGTCACGTGAGCCGAGTGACCAGCTCTGGCTCCCTGTaGAGAGGTTCTGAACGATGC +
Preference number: 2 (lower is better)
Translates to: HILVIIRETDVRHVSRVTSSGSL*RGSERC
Trigger: GCATCGTTCAGAACCTCTCCACAGGGAGCCAGAGCT...GGTCACTCGGCTCACGTGACGAACATCCGTTTCTCTTATGATGACAAGTATGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR-3UTR CCA 90 bp TCTCCGTCTTTGGTTCCCACTAAGATTTTTCCTTTTCCACGGCACACGGAGCGCATGGCGTCCCATATGTaGATGGAAGGTGTTGTCCCT +
Preference number: 2 (lower is better)
Translates to: SPSLVPTKIFPFPRHTERMASHM*MEGVVP
Trigger: AGGGACAACACCTTCCATCCACATATGGGACGCCAT...GCGCTCCGTGTGCCGTGGAAAAGGAAAAATCTTAGTGGGAACCAAAGACGGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR-3UTR TCA 90 bp ATCACGGTTTTGGAGAGTCCAGATTATGGGAGCAGTTGTGTAACTTCTGCAGCGGCTACATGGAAAGTGTaGCTGAGGGGCTTACGGATG +
Preference number: 2 (lower is better)
Translates to: ITVLESPDYGSSCVTSAAATWKV*LRGLRM
Trigger: CATCCGTAAGCCCCTCAGTCACACTTTCCATGTAGC...CGCTGCAGAAGTTACACAACTGCTCCCATAATCTGGACTCTCCAAAACCGTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
3UTR-3UTR TCA 90 bp CAGTGTCAGCATTTACCACCAGGAAACTCCCATCGTTCAAGCCAACCGCTAAGGGCGAAGAATGGAATCTaGACATTCTCCCAAGGGGTT +
Preference number: 2 (lower is better)
Translates to: QCQHLPPGNSHRSSQPLRAKNGI*TFSQGV
Trigger: AACCCCTTGGGAGAATGTTCAGATTCCATTCTTCGC...CCTTAGCGGTTGGCTTGAACGATGGGAGTTTCCTGGTGGTAAATGCTGACACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673746.1
3UTR-3UTR GCA 90 bp AATGAAGTCACCTCAACTCCACTCAGGGTGGTACACCAAGGTGCAGCCTTGGGTCAGTTGTGTAACTTCTaGAGCGTTTTGAGCTTGTGC +
Preference number: 2 (lower is better)
Translates to: NEVTSTPLRVVHQGAALGQLCNF*SVLSLC
Trigger: GCACAAGCTCAAAACGCTGCAGAAGTTACACAACTG...ACCCAAGGCTGCACCTTGGTGTACCACCCTGAGTGGAGTTGAGGTGACTTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
3UTR-3UTR CCA 90 bp GCAGCCCACACAACTGGAAACTTTCAAAGGCACTTAATGGATATAAAACTCTGCGGAGGCACCTCAGCATaGCCTCTGCAGTTGCTGGCT +
Preference number: 2 (lower is better)
Translates to: AAHTTGNFQRHLMDIKLCGGTSA*PLQLLA
Trigger: AGCCAGCAACTGCAGAGGCCATGCTGAGGTGCCTCC...GCAGAGTTTTATATCCATTAAGTGCCTTTGAAAGTTTCCAGTTGTGTGGGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
3UTR-3UTR CCA 90 bp GATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACAGAAAACTTTCCCAACGGCTGGTaGCAAGGAGGCACCTCAGCA +
Preference number: 2 (lower is better)
Translates to: DRQTWLSLCITSHMVTENFPNGW*QGGTSA
Trigger: TGCTGAGGTGCCTCCTTGCCACCAGCCGTTGGGAAA...GTTTTCTGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
3UTR-3UTR CCA 90 bp AATTTTCGTTCACTGACCAGAAGGACTAATAGGCGTCTATGTGCTCAGAACCACGCATTTCCCAACGGCTaGTGGCAAGGAGGCACCTCA +
Preference number: 2 (lower is better)
Translates to: NFRSLTRRTNRRLCAQNHAFPNG*WQGGTS
Trigger: TGAGGTGCCTCCTTGCCACCAGCCGTTGGGAAATGC...GTGGTTCTGAGCACATAGACGCCTATTAGTCCTTCTGGTCAGTGAACGAAAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
3UTR-3UTR CCA 90 bp TCTCCGTCTTTGGTTCCCACTAAGATTTTTCCTTTTCCACGGCACACGGAGCGCAGAGCAAGAGGACACTaGAACTATGGCATGGCTCAT +
Preference number: 2 (lower is better)
Translates to: SPSLVPTKIFPFPRHTERRARGH*NYGMAH
Trigger: ATGAGCCATGCCATAGTTCCAGTGTCCTCTTGCTCT...GCGCTCCGTGTGCCGTGGAAAAGGAAAAATCTTAGTGGGAACCAAAGACGGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR-3UTR TCA 90 bp TACAAGATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACAGGAAATTGGTGGGAGGTaGGACAGCAGCCCACACAAC +
Preference number: 2 (lower is better)
Translates to: YKIGRHGYHSASPVTWLQEIGGR*DSSPHN
Trigger: GTTGTGTGGGCTGCTGTCTCACCTCCCACCAATTTC...CTGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATCTTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
3UTR-3UTR TCA 90 bp GTACAAGATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACAGAAATTGGTGGGAGGTaGGACAGCAGCCCACACAAC +
Preference number: 2 (lower is better)
Translates to: VQDRQTWLSLCITSHMVTEIGGR*DSSPHN
Trigger: GTTGTGTGGGCTGCTGTCTCACCTCCCACCAATTTC...TGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATCTTGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
3UTR-3UTR TCA 90 bp ATCACGGTTTTGGAGAGTCCAGATTATGGGAGCAGTTGTGTAACTTCTGCAGCGAGCCCTCCTCAGCTTTaGGGTTTTAGCACCATATGG +
Preference number: 2 (lower is better)
Translates to: ITVLESPDYGSSCVTSAASPPQL*GFSTIW
Trigger: CCATATGGTGCTAAAACCTCAAAGCTGAGGAGGGCT...CGCTGCAGAAGTTACACAACTGCTCCCATAATCTGGACTCTCCAAAACCGTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
3UTR-3UTR TCA 90 bp CACATACTTGTCATCATAAGAGAAACGGATGTTCGTCACGTGAGCCGAGTGACCAGCCCTCCTCAGCTTTaGGGTTTTAGCACCATATGG +
Preference number: 2 (lower is better)
Translates to: HILVIIRETDVRHVSRVTSPPQL*GFSTIW
Trigger: CCATATGGTGCTAAAACCTCAAAGCTGAGGAGGGCT...GGTCACTCGGCTCACGTGACGAACATCCGTTTCTCTTATGATGACAAGTATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR-3UTR GCA 90 bp GCAGCCCACACAACTGGAAACTTTCAAAGGCACTTAATGGATATAAAACTCTGCCCTCAGCATGGCCTCTaGAGTTGCTGGCTGGTAGCA +
Preference number: 2 (lower is better)
Translates to: AAHTTGNFQRHLMDIKLCPQHGL*SCWLVA
Trigger: TGCTACCAGCCAGCAACTGCAGAGGCCATGCTGAGG...GCAGAGTTTTATATCCATTAAGTGCCTTTGAAAGTTTCCAGTTGTGTGGGCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
3UTR-3UTR GCA 90 bp GTACAAGATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACAGGTGGTACACCAAGGTaGAGCCTTGGGTTACCCTCA +
Preference number: 2 (lower is better)
Translates to: VQDRQTWLSLCITSHMVTGGTPR*SLGLPS
Trigger: TGAGGGTAACCCAAGGCTGCACCTTGGTGTACCACC...TGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATCTTGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
3UTR-3UTR GCA 90 bp CTTGTCAGCCAGGTCCCAGATCCGGGCTGTGCCATCGTTGCTGGCAGAGATGAATGTTTACAGCTGTATTaGTTCAAAACTGAAGATGAG +
Preference number: 2 (lower is better)
Translates to: LVSQVPDPGCAIVAGRDECLQLY*FKTEDE
Trigger: CTCATCTTCAGTTTTGAAGCAATACAGCTGTAAACA...TTCATCTCTGCCAGCAACGATGGCACAGCCCGGATCTGGGACCTGGCTGACAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR-3UTR GCA 90 bp GTACAAGATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACAAGAGGTTCTGAACGATaGCAGCCGCTGCTGTGTGGA +
Preference number: 2 (lower is better)
Translates to: VQDRQTWLSLCITSHMVTRGSER*QPLLCG
Trigger: TCCACACAGCAGCGGCTGGCATCGTTCAGAACCTCT...TGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATCTTGTAC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR-3UTR GCA 90 bp ATCACGGTTTTGGAGAGTCCAGATTATGGGAGCAGTTGTGTAACTTCTGCAGCGGACATCAGCCTTGTCTaGATTTCGTGGCCAGATTCC +
Preference number: 2 (lower is better)
Translates to: ITVLESPDYGSSCVTSAADISLV*ISWPDS
Trigger: GGAATCTGGCCACGAAATGCAGACAAGGCTGATGTC...CGCTGCAGAAGTTACACAACTGCTCCCATAATCTGGACTCTCCAAAACCGTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR-3UTR CCA 90 bp TCTGGCTCCCTGTGGAGAGGTTCTGAACGATGCCAGCCGCTGCTGTGTGGAAGAGGGAGTTATGTACAATaGATACTTTGTTTCCAAATC +
Preference number: 2 (lower is better)
Translates to: SGSLWRGSERCQPLLCGRGSYVQ*ILCFQI
Trigger: GATTTGGAAACAAAGTATCCATTGTACATAACTCCC...TCTTCCACACAGCAGCGGCTGGCATCGTTCAGAACCTCTCCACAGGGAGCCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR CAA 90 bp GAGCAAGAGGACACTGGAACTATGGCATGGCTCATAAGGCATTATTaGAGGATAAACACAGGGCTCGATTTCAGGGGACACACAGGTTGT +
Preference number: 2 (lower is better)
Translates to: EQEDTGTMAWLIRHY*RINTGLDFRGHTGC
Trigger: ACAACCTGTGTGTCCCCTGAAATCGAGCCCTGTGTTTATCCTCAAATAATGCCTTATGAGCCATGCCATAGTTCCAGTGTCCTCTTGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR-3UTR TCA 90 bp TTTCGTTCACTGACCAGAAGGACTAATAGGCGTCTATGTGCTCAGAACCACCAGAACACAGGACAAGGGTaGCACACTGAATCTGCTAAG +
Preference number: 2 (lower is better)
Translates to: FRSLTRRTNRRLCAQNHQNTGQG*HTESAK
Trigger: CTTAGCAGATTCAGTGTGTCACCCTTGTCCTGTGTT...CTGGTGGTTCTGAGCACATAGACGCCTATTAGTCCTTCTGGTCAGTGAACGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
3UTR-3UTR TCA 90 bp AGAGGCTTCTGGCATTTTACAGACATCGCCACACAAATACACTGCAGTCGTCTCAACACAGGACAAGGGTaGCACACTGAATCTGCTAAG +
Preference number: 2 (lower is better)
Translates to: RGFWHFTDIATQIHCSRLNTGQG*HTESAK
Trigger: CTTAGCAGATTCAGTGTGTCACCCTTGTCCTGTGTT...GAGACGACTGCAGTGTATTTGTGTGGCGATGTCTGTAAAATGCCAGAAGCCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR-3UTR TCA 90 bp TTTCGTTCACTGACCAGAAGGACTAATAGGCGTCTATGTGCTCAGAACCACCAGTCTCATAGACCTTCCTaGGCCTTTTTCCCCTTCCAT +
Preference number: 2 (lower is better)
Translates to: FRSLTRRTNRRLCAQNHQSHRPS*AFFPFH
Trigger: ATGGAAGGGGAAAAAGGCTCAGGAAGGTCTATGAGA...CTGGTGGTTCTGAGCACATAGACGCCTATTAGTCCTTCTGGTCAGTGAACGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
3UTR-3UTR TCA 90 bp GATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACAGAAAACGCTACATGGAAAGTGTaGCTGAGGGGCTTACGGATG +
Preference number: 2 (lower is better)
Translates to: DRQTWLSLCITSHMVTENATWKV*LRGLRM
Trigger: CATCCGTAAGCCCCTCAGTCACACTTTCCATGTAGC...GTTTTCTGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
3UTR-3UTR GCA 90 bp TGTCCAAGTCATATTCCGTCATACAACCAACTCCAAGGAACTCTAACTCACTTTCCTCAGCATGGCCTCTaGAGTTGCTGGCTGGTAGCA +
Preference number: 2 (lower is better)
Translates to: CPSHIPSYNQLQGTLTHFPQHGL*SCWLVA
Trigger: TGCTACCAGCCAGCAACTGCAGAGGCCATGCTGAGG...AAAGTGAGTTAGAGTTCCTTGGAGTTGGTTGTATGACGGAATATGACTTGGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
3UTR-3UTR GCA 90 bp AATTTTCGTTCACTGACCAGAAGGACTAATAGGCGTCTATGTGCTCAGAACCACAGCGTTTTGAGCTTGTaGATCCGGGGCAGCATGGTA +
Preference number: 2 (lower is better)
Translates to: NFRSLTRRTNRRLCAQNHSVLSL*IRGSMV
Trigger: TACCATGCTGCCCCGGATGCACAAGCTCAAAACGCT...GTGGTTCTGAGCACATAGACGCCTATTAGTCCTTCTGGTCAGTGAACGAAAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
3UTR-3UTR GCA 90 bp CAACAGTGTCAGCATTTACCACCAGGAAACTCCCATCGTTCAAGCCAACCGCTAGAAAGATGTTGTTCTTaGCTCTTCTGTCACGCGAAG +
Preference number: 2 (lower is better)
Translates to: QQCQHLPPGNSHRSSQPLERCCS*LFCHAK
Trigger: CTTCGCGTGACAGAAGAGGCAAGAACAACATCTTTC...TAGCGGTTGGCTTGAACGATGGGAGTTTCCTGGTGGTAAATGCTGACACTGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673746.1
3UTR-3UTR TCA 90 bp AGCAGCCCACACAACTGGAAACTTTCAAAGGCACTTAATGGATATAAAACTCTGACTTCTGCAGCGTTTTaGGCTTGTGCATCCGGGGCA +
Preference number: 2 (lower is better)
Translates to: SSPHNWKLSKALNGYKTLTSAAF*ACASGA
Trigger: TGCCCCGGATGCACAAGCTCAAAACGCTGCAGAAGT...CAGAGTTTTATATCCATTAAGTGCCTTTGAAAGTTTCCAGTTGTGTGGGCTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
3UTR-3UTR TCA 90 bp TTTCGTTCACTGACCAGAAGGACTAATAGGCGTCTATGTGCTCAGAACCACCAGCCTGAAGCAATCAAATaGAGTCACCTCAACTCCACT +
Preference number: 2 (lower is better)
Translates to: FRSLTRRTNRRLCAQNHQPEAIK*SHLNST
Trigger: AGTGGAGTTGAGGTGACTTCATTTGATTGCTTCAGG...CTGGTGGTTCTGAGCACATAGACGCCTATTAGTCCTTCTGGTCAGTGAACGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
3UTR-3UTR TCA 90 bp AATTTTCGTTCACTGACCAGAAGGACTAATAGGCGTCTATGTGCTCAGAACCACTCATCGCCACCAAATTaGGCAAAATCGGGAGACTGG +
Preference number: 2 (lower is better)
Translates to: NFRSLTRRTNRRLCAQNHSSPPN*AKSGDW
Trigger: CCAGTCTCCCGATTTTGCTCAATTTGGTGGCGATGA...GTGGTTCTGAGCACATAGACGCCTATTAGTCCTTCTGGTCAGTGAACGAAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR-3UTR GCA 90 bp GAGCATCGTCTGCATTTTGGCAGCTCCCAGGGACCCGATGACCCCTTTCTTGTAACACACGGACACTATTaGTCTTTAAATATGGTTGTA +
Preference number: 2 (lower is better)
Translates to: EHRLHFGSSQGPDDPFLVTHGHY*SLNMVV
Trigger: TACAACCATATTTAAAGAGCAATAGTGTCCGTGTGT...TACAAGAAAGGGGTCATCGGGTCCCTGGGAGCTGCCAAAATGCAGACGATGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR-3UTR GCA 90 bp CTTCCACATGGTTATTTCAATGCAAGATCCGATCAGCATGAAGAGTCTAGTACATGTAAAGCAAGGCGCTaGCTGCCAGGGTCCAGAACT +
Preference number: 2 (lower is better)
Translates to: LPHGYFNARSDQHEESSTCKARR*LPGSRT
Trigger: AGTTCTGGACCCTGGCAGGCAGCGCCTTGCTTTACA...TGTACTAGACTCTTCATGCTGATCGGATCTTGCATTGAAATAACCATGTGGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR-3UTR CCA 90 bp ATCACGGTTTTGGAGAGTCCAGATTATGGGAGCAGTTGTGTAACTTCTGCAGCGGGAGAGTCCAGATTATaGGAGCAGTTGTGTAACTTC +
Preference number: 2 (lower is better)
Translates to: ITVLESPDYGSSCVTSAAGESRL*EQLCNF
Trigger: GAAGTTACACAACTGCTCCCATAATCTGGACTCTCC...CGCTGCAGAAGTTACACAACTGCTCCCATAATCTGGACTCTCCAAAACCGTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
3UTR-3UTR CCA 90 bp AATTTTCGTTCACTGACCAGAAGGACTAATAGGCGTCTATGTGCTCAGAACCACCTTGACCTTCCTTCGTaGCATCACGGTTTTGGAGAG +
Preference number: 2 (lower is better)
Translates to: NFRSLTRRTNRRLCAQNHLDLPS*HHGFGE
Trigger: CTCTCCAAAACCGTGATGCCACGAAGGAAGGTCAAG...GTGGTTCTGAGCACATAGACGCCTATTAGTCCTTCTGGTCAGTGAACGAAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
3UTR-3UTR CCA 90 bp GTACAAGATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACACTTGACCTTCCTTCGTaGCATCACGGTTTTGGAGAG +
Preference number: 2 (lower is better)
Translates to: VQDRQTWLSLCITSHMVTLDLPS*HHGFGE
Trigger: CTCTCCAAAACCGTGATGCCACGAAGGAAGGTCAAG...TGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATCTTGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
3UTR-3UTR CCA 90 bp CTTCCACATGGTTATTTCAATGCAAGATCCGATCAGCATGAAGAGTCTAGTACACAACTCCACTCAGGGTaGTACACCAAGGTGCAGCCT +
Preference number: 2 (lower is better)
Translates to: LPHGYFNARSDQHEESSTQLHSG*YTKVQP
Trigger: AGGCTGCACCTTGGTGTACCACCCTGAGTGGAGTTG...TGTACTAGACTCTTCATGCTGATCGGATCTTGCATTGAAATAACCATGTGGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
3UTR-3UTR CCA 90 bp TACAAGATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACAGCTGCTTAGAGTGTGCTaGGGAGAAACTTGCTGTCAG +
Preference number: 2 (lower is better)
Translates to: YKIGRHGYHSASPVTWLQLLRVC*GETCCQ
Trigger: CTGACAGCAAGTTTCTCCCCAGCACACTCTAAGCAG...CTGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATCTTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR-3UTR TCA 90 bp GATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACAGAAAACTCTCATAGACCTTCCTaGGCCTTTTTCCCCTTCCAT +
Preference number: 2 (lower is better)
Translates to: DRQTWLSLCITSHMVTENSHRPS*AFFPFH
Trigger: ATGGAAGGGGAAAAAGGCTCAGGAAGGTCTATGAGA...GTTTTCTGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
3UTR-3UTR TCA 90 bp TGCTGCTCACCTTCCCATAAGCAGGTAACCGATGTCTTTCATTTAGGAAGCCTTCCTGAAGCAATCAAATaGAGTCACCTCAACTCCACT +
Preference number: 2 (lower is better)
Translates to: CCSPSHKQVTDVFHLGSLPEAIK*SHLNST
Trigger: AGTGGAGTTGAGGTGACTTCATTTGATTGCTTCAGG...AAGGCTTCCTAAATGAAAGACATCGGTTACCTGCTTATGGGAAGGTGAGCAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
3UTR-3UTR TCA 90 bp CACATACTTGTCATCATAAGAGAAACGGATGTTCGTCACGTGAGCCGAGTGACCAGTGGGACTTTCAAATaGAATCCGTGGGTTTCTTCT +
Preference number: 2 (lower is better)
Translates to: HILVIIRETDVRHVSRVTSGTFK*NPWVSS
Trigger: AGAAGAAACCCACGGATTTCATTTGAAAGTCCCACT...GGTCACTCGGCTCACGTGACGAACATCCGTTTCTCTTATGATGACAAGTATGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR-3UTR GCA 90 bp GTACAAGATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACAAAACAGAATTGGGACTaGATAGGGACTCTACTGCGG +
Preference number: 2 (lower is better)
Translates to: VQDRQTWLSLCITSHMVTKQNWD*IGTLLR
Trigger: CCGCAGTAGAGTCCCTATGCAGTCCCAATTCTGTTT...TGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATCTTGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
3UTR-3UTR GCA 90 bp CTTCCACATGGTTATTTCAATGCAAGATCCGATCAGCATGAAGAGTCTAGTACAGGGAGACTGGGGGCATaGCAGTTCTCACAATTAGAC +
Preference number: 2 (lower is better)
Translates to: LPHGYFNARSDQHEESSTGRLGA*QFSQLD
Trigger: GTCTAATTGTGAGAACTGGCATGCCCCCAGTCTCCC...TGTACTAGACTCTTCATGCTGATCGGATCTTGCATTGAAATAACCATGTGGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR-3UTR CCA 90 bp TACAAGATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACAGGTGGCATCACGGTTTTaGAGAGTCCAGATTATGGGA +
Preference number: 2 (lower is better)
Translates to: YKIGRHGYHSASPVTWLQVASRF*RVQIMG
Trigger: TCCCATAATCTGGACTCTCCAAAACCGTGATGCCAC...CTGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATCTTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
3UTR-3UTR CCA 90 bp TGCTGCTCACCTTCCCATAAGCAGGTAACCGATGTCTTTCATTTAGGAAGCCTTACATCCTGTAGTCACTaGTCAGCTACATGGAAAGTG +
Preference number: 2 (lower is better)
Translates to: CCSPSHKQVTDVFHLGSLTSCSH*SATWKV
Trigger: CACTTTCCATGTAGCTGACCAGTGACTACAGGATGT...AAGGCTTCCTAAATGAAAGACATCGGTTACCTGCTTATGGGAAGGTGAGCAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
3UTR-3UTR CCA 90 bp CTTCCACATGGTTATTTCAATGCAAGATCCGATCAGCATGAAGAGTCTAGTACATCCCTATCTGGCTGGTaGCCACCACGTTTCTGTACT +
Preference number: 2 (lower is better)
Translates to: LPHGYFNARSDQHEESSTSLSGW*PPRFCT
Trigger: AGTACAGAAACGTGGTGGCCACCAGCCAGATAGGGA...TGTACTAGACTCTTCATGCTGATCGGATCTTGCATTGAAATAACCATGTGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR CAA 90 bp GCATTGTGGCAAATTCAGCGGATTTTAAGTATTGACCCTTCGCGGTaGTGGATTCTGCGTGAACACTTAGTACTGGATGTTCACCAAACA +
Preference number: 2 (lower is better)
Translates to: ALWQIQRILSIDPSR*WILREHLVLDVHQT
Trigger: TGTTTGGTGAACATCCAGTACTAAGTGTTCACGCAGAATCCACAACCGCGAAGGGTCAATACTTAAAATCCGCTGAATTTGCCACAATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR-3UTR TCA 90 bp AGAGGCTTCTGGCATTTTACAGACATCGCCACACAAATACACTGCAGTCGTCTCTTTGTGGGTTTGGCATaGAACACAATGAAAACCCAT +
Preference number: 2 (lower is better)
Translates to: RGFWHFTDIATQIHCSRLFVGLA*NTMKTH
Trigger: ATGGGTTTTCATTGTGTTTCATGCCAAACCCACAAA...GAGACGACTGCAGTGTATTTGTGTGGCGATGTCTGTAAAATGCCAGAAGCCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR-3UTR TCA 90 bp GTCCTTCCAGACGTAGACATCTCCATTGATGGCACCCGTGAAAGTGAGATTGTTACCTTTTCTCTAAACTaGCAAATGCAAGTAGCCAGT +
Preference number: 2 (lower is better)
Translates to: VLPDVDISIDGTRESEIVTFSLN*QMQVAS
Trigger: ACTGGCTACTTGCATTTGTCAGTTTAGAGAAAAGGT...AACAATCTCACTTTCACGGGTGCCATCAATGGAGATGTCTACGTCTGGAAGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR-3UTR TCA 90 bp GCAGCCCACACAACTGGAAACTTTCAAAGGCACTTAATGGATATAAAACTCTGCGAACGTTTAAGTGTATaGCAAAAGCAAGCCAGGGGC +
Preference number: 2 (lower is better)
Translates to: AAHTTGNFQRHLMDIKLCERLSV*QKQARG
Trigger: GCCCCTGGCTTGCTTTTGTCATACACTTAAACGTTC...GCAGAGTTTTATATCCATTAAGTGCCTTTGAAAGTTTCCAGTTGTGTGGGCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR-3UTR TCA 90 bp AGAGGCTTCTGGCATTTTACAGACATCGCCACACAAATACACTGCAGTCGTCTCTGTTCACCAACAAGATaGCAAACTCTCCATTCTTCA +
Preference number: 2 (lower is better)
Translates to: RGFWHFTDIATQIHCSRLCSPTR*QTLHSS
Trigger: TGAAGAATGGAGAGTTTGTCATCTTGTTGGTGAACA...GAGACGACTGCAGTGTATTTGTGTGGCGATGTCTGTAAAATGCCAGAAGCCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR-3UTR CCA 90 bp GTACAAGATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACAGGAGAGTCCAGATTATaGGAGCAGTTGTGTAACTTC +
Preference number: 2 (lower is better)
Translates to: VQDRQTWLSLCITSHMVTGESRL*EQLCNF
Trigger: GAAGTTACACAACTGCTCCCATAATCTGGACTCTCC...TGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATCTTGTAC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
3UTR-3UTR CCA 90 bp GCAGCCCACACAACTGGAAACTTTCAAAGGCACTTAATGGATATAAAACTCTGCGTGGCATCACGGTTTTaGAGAGTCCAGATTATGGGA +
Preference number: 2 (lower is better)
Translates to: AAHTTGNFQRHLMDIKLCVASRF*RVQIMG
Trigger: TCCCATAATCTGGACTCTCCAAAACCGTGATGCCAC...GCAGAGTTTTATATCCATTAAGTGCCTTTGAAAGTTTCCAGTTGTGTGGGCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
3UTR-3UTR CCA 90 bp CTTCCACATGGTTATTTCAATGCAAGATCCGATCAGCATGAAGAGTCTAGTACAGGAGAAAGGAGAAATTaGTGGGAGGTGAGACAGCAG +
Preference number: 2 (lower is better)
Translates to: LPHGYFNARSDQHEESSTGERRN*WEVRQQ
Trigger: CTGCTGTCTCACCTCCCACCAATTTCTCCTTTCTCC...TGTACTAGACTCTTCATGCTGATCGGATCTTGCATTGAAATAACCATGTGGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
3UTR-3UTR CCA 90 bp GATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACAGAAAACACATCCTGTAGTCACTaGTCAGCTACATGGAAAGTG +
Preference number: 2 (lower is better)
Translates to: DRQTWLSLCITSHMVTENTSCSH*SATWKV
Trigger: CACTTTCCATGTAGCTGACCAGTGACTACAGGATGT...GTTTTCTGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
3UTR-3UTR CCA 90 bp TACAAGATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACAGACAATGACATCTTCCTaGATGTCGTGGGGAGTTATG +
Preference number: 2 (lower is better)
Translates to: YKIGRHGYHSASPVTWLQTMTSS*MSWGVM
Trigger: CATAACTCCCCACGACATCCAGGAAGATGTCATTGT...CTGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATCTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR-3UTR TCA 90 bp CCAACTCCAAGGAACTCTAACTCACTTTATAATTTTGATTTACCAGCTATTCCTACTTCTGCAGCGTTTTaGGCTTGTGCATCCGGGGCA +
Preference number: 2 (lower is better)
Translates to: PTPRNSNSLYNFDLPAIPTSAAF*ACASGA
Trigger: TGCCCCGGATGCACAAGCTCAAAACGCTGCAGAAGT...AGGAATAGCTGGTAAATCAAAATTATAAAGTGAGTTAGAGTTCCTTGGAGTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
3UTR-3UTR TCA 90 bp ATCACGGTTTTGGAGAGTCCAGATTATGGGAGCAGTTGTGTAACTTCTGCAGCGATCCATTTAGAATGCTaGAGCACTTCTGTGGTAAAT +
Preference number: 2 (lower is better)
Translates to: ITVLESPDYGSSCVTSAAIHLEC*STSVVN
Trigger: ATTTACCACAGAAGTGCTTCAGCATTCTAAATGGAT...CGCTGCAGAAGTTACACAACTGCTCCCATAATCTGGACTCTCCAAAACCGTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
3UTR-3UTR TCA 90 bp GTACAAGATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACACTGTCAGAAAAACAATaGCATCTTCCTGGATGTCGT +
Preference number: 2 (lower is better)
Translates to: VQDRQTWLSLCITSHMVTLSEKQ*HLPGCR
Trigger: ACGACATCCAGGAAGATGTCATTGTTTTTCTGACAG...TGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATCTTGTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR-3UTR CCA 90 bp AGCAGCCCACACAACTGGAAACTTTCAAAGGCACTTAATGGATATAAAACTCTGGTGGCATCACGGTTTTaGAGAGTCCAGATTATGGGA +
Preference number: 2 (lower is better)
Translates to: SSPHNWKLSKALNGYKTLVASRF*RVQIMG
Trigger: TCCCATAATCTGGACTCTCCAAAACCGTGATGCCAC...CAGAGTTTTATATCCATTAAGTGCCTTTGAAAGTTTCCAGTTGTGTGGGCTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
3UTR-3UTR TCA 90 bp TGTCCAAGTCATATTCCGTCATACAACCAACTCCAAGGAACTCTAACTCACTTTCCTGAAGCAATCAAATaGAGTCACCTCAACTCCACT +
Preference number: 2 (lower is better)
Translates to: CPSHIPSYNQLQGTLTHFPEAIK*SHLNST
Trigger: AGTGGAGTTGAGGTGACTTCATTTGATTGCTTCAGG...AAAGTGAGTTAGAGTTCCTTGGAGTTGGTTGTATGACGGAATATGACTTGGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
3UTR-3UTR TCA 90 bp AATTTTCGTTCACTGACCAGAAGGACTAATAGGCGTCTATGTGCTCAGAACCACTATTATAATCACCACTaGAGAATGGGTAGACAGCAC +
Preference number: 2 (lower is better)
Translates to: NFRSLTRRTNRRLCAQNHYYNHH*RMGRQH
Trigger: GTGCTGTCTACCCATTCTTCAGTGGTGATTATAATA...GTGGTTCTGAGCACATAGACGCCTATTAGTCCTTCTGGTCAGTGAACGAAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR-3UTR GCA 90 bp CTTCCACATGGTTATTTCAATGCAAGATCCGATCAGCATGAAGAGTCTAGTACACTTCAATTCCTTTGCTaGTCACCTTCCCATAAGCAG +
Preference number: 2 (lower is better)
Translates to: LPHGYFNARSDQHEESSTLQFLC*SPSHKQ
Trigger: CTGCTTATGGGAAGGTGAGCAGCAAAGGAATTGAAG...TGTACTAGACTCTTCATGCTGATCGGATCTTGCATTGAAATAACCATGTGGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
3UTR-3UTR CCA 90 bp TTTCGTTCACTGACCAGAAGGACTAATAGGCGTCTATGTGCTCAGAACCACCAGCTATTTTGGATTTTGTaGGTTTGGCATGAAACACAA +
Preference number: 2 (lower is better)
Translates to: FRSLTRRTNRRLCAQNHQLFWIL*VWHETQ
Trigger: TTGTGTTTCATGCCAAACCCACAAAATCCAAAATAG...CTGGTGGTTCTGAGCACATAGACGCCTATTAGTCCTTCTGGTCAGTGAACGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
3UTR-3UTR CCA 90 bp CACATACTTGTCATCATAAGAGAAACGGATGTTCGTCACGTGAGCCGAGTGACCCTATTTTGGATTTTGTaGGTTTGGCATGAAACACAA +
Preference number: 2 (lower is better)
Translates to: HILVIIRETDVRHVSRVTLFWIL*VWHETQ
Trigger: TTGTGTTTCATGCCAAACCCACAAAATCCAAAATAG...GGTCACTCGGCTCACGTGACGAACATCCGTTTCTCTTATGATGACAAGTATGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR-3UTR CCA 90 bp CCAACTCCAAGGAACTCTAACTCACTTTATAATTTTGATTTACCAGCTATTCCTCTTGACCTTCCTTCGTaGCATCACGGTTTTGGAGAG +
Preference number: 2 (lower is better)
Translates to: PTPRNSNSLYNFDLPAIPLDLPS*HHGFGE
Trigger: CTCTCCAAAACCGTGATGCCACGAAGGAAGGTCAAG...AGGAATAGCTGGTAAATCAAAATTATAAAGTGAGTTAGAGTTCCTTGGAGTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
3UTR-3UTR CCA 90 bp TACAAGATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACAGTTACCAGCTATTCCTTaGGTTTACAATTTGTTCTGC +
Preference number: 2 (lower is better)
Translates to: YKIGRHGYHSASPVTWLQLPAIP*VYNLFC
Trigger: GCAGAACAAATTGTAAACCCAAGGAATAGCTGGTAA...CTGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATCTTGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
3UTR-3UTR CCA 90 bp AAAGTTTTGATGCAAATTAAAAGCTACATATTGGTTAGGGTAACCGAGGCTTCAGACCCTTCGCGGTTGTaGATTCTGCGTGAACACTTA +
Preference number: 2 (lower is better)
Translates to: KVLMQIKSYILVRVTEASDPSRL*ILREHL
Trigger: TAAGTGTTCACGCAGAATCCACAACCGCGAAGGGTC...TGAAGCCTCGGTTACCCTAACCAATATGTAGCTTTTAATTTGCATCAAAACTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR-3UTR TCA 90 bp TGTCCAAGTCATATTCCGTCATACAACCAACTCCAAGGAACTCTAACTCACTTTTTTGTGGGTTTGGCATaGAACACAATGAAAACCCAT +
Preference number: 2 (lower is better)
Translates to: CPSHIPSYNQLQGTLTHFFVGLA*NTMKTH
Trigger: ATGGGTTTTCATTGTGTTTCATGCCAAACCCACAAA...AAAGTGAGTTAGAGTTCCTTGGAGTTGGTTGTATGACGGAATATGACTTGGACA
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
3UTR-3UTR GCA 90 bp TTGTGTGCAGGGGAAGACAGGGTACCTTTATTTTCTCAGAAACTCTTCAATCAAAGTGAATATAGAGTATaGGTACAAGCACAAACACCG +
Preference number: 2 (lower is better)
Translates to: LCAGEDRVPLFSQKLFNQSEYRV*VQAQTP
Trigger: CGGTGTTTGTGCTTGTACGCATACTCTATATTCACT...TTGATTGAAGAGTTTCTGAGAAAATAAAGGTACCCTGTCTTCCCCTGCACACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR-3UTR CCA 90 bp TACAAGATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACAGCTATTTTGGATTTTGTaGGTTTGGCATGAAACACAA +
Preference number: 2 (lower is better)
Translates to: YKIGRHGYHSASPVTWLQLFWIL*VWHETQ
Trigger: TTGTGTTTCATGCCAAACCCACAAAATCCAAAATAG...CTGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATCTTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
3UTR-3UTR CCA 90 bp AGCATATGTTTACAGCTGTATTGCTTCAAAACTGAAGATGAGAGGAGCAAGGGGAAGAAACCTGCATTGTaGCAAATTCAGCGGATTTTA +
Preference number: 2 (lower is better)
Translates to: SICLQLYCFKTEDERSKGKKPAL*QIQRIL
Trigger: TAAAATCCGCTGAATTTGCCACAATGCAGGTTTCTT...CCCCTTGCTCCTCTCATCTTCAGTTTTGAAGCAATACAGCTGTAAACATATGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR-3UTR TCA 90 bp CCAACTCCAAGGAACTCTAACTCACTTTATAATTTTGATTTACCAGCTATTCCTGTTGTGGATTCTGCGTaGACACTTAGTACTGGATGT +
Preference number: 2 (lower is better)
Translates to: PTPRNSNSLYNFDLPAIPVVDSA*TLSTGC
Trigger: ACATCCAGTACTAAGTGTTCACGCAGAATCCACAAC...AGGAATAGCTGGTAAATCAAAATTATAAAGTGAGTTAGAGTTCCTTGGAGTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR-3UTR GCA 90 bp CCAACTCCAAGGAACTCTAACTCACTTTATAATTTTGATTTACCAGCTATTCCTCTTCAATTCCTTTGCTaGTCACCTTCCCATAAGCAG +
Preference number: 2 (lower is better)
Translates to: PTPRNSNSLYNFDLPAIPLQFLC*SPSHKQ
Trigger: CTGCTTATGGGAAGGTGAGCAGCAAAGGAATTGAAG...AGGAATAGCTGGTAAATCAAAATTATAAAGTGAGTTAGAGTTCCTTGGAGTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
3UTR-3UTR CCA 90 bp AGCCCACACAACTGGAAACTTTCAAAGGCACTTAATGGATATAAAACTCTGCAAACTGGAACTATGGCATaGCTCATAAGGCATTATTTG +
Preference number: 2 (lower is better)
Translates to: SPHNWKLSKALNGYKTLQTGTMA*LIRHYL
Trigger: CAAATAATGCCTTATGAGCCATGCCATAGTTCCAGT...TTGCAGAGTTTTATATCCATTAAGTGCCTTTGAAAGTTTCCAGTTGTGTGGGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR TCA 72 bp CCCAGATCCGGGCTGTGCCATCGTTGCTGGCAGAGATaGAGAGGTCCTTGGAAGGGTGAGTGGCCAGGCCCC +
Preference number: 3 (lower is better)
Translates to: PRSGLCHRCWQR*RGPWKGEWPGP
Trigger: GGGGCCTGGCCACTCACCCTTCCAAGGACCTCTTCATCTCTGCCAGCAACGATGGCACAGCCCGGATCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR CCA 72 bp CCACCACAAATATGCGCTCCAGGTGACCCCCTCGGCTaGCAACCTTGGCACCTTCCTGCCATCGCCAGACAG +
Preference number: 3 (lower is better)
Translates to: PPQICAPGDPLG*QPWHLPAIARQ
Trigger: CTGTCTGGCGATGGCAGGAAGGTGCCAAGGTTGCCAGCCGAGGGGGTCACCTGGAGCGCATATTTGTGGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR TCA 72 bp TCGGGGCGAAATTCCACCACAAATATGCGCTCCAGGTaGCCCCCTCGGCTGGCAACCTTGGCACCTTCCTGC +
Preference number: 3 (lower is better)
Translates to: SGRNSTTNMRSR*PPRLATLAPSC
Trigger: GCAGGAAGGTGCCAAGGTTGCCAGCCGAGGGGGTCACCTGGAGCGCATATTTGTGGTGGAATTTCGCCCCGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR GCA 72 bp GCGTGTCTGAGTCGGGGCGAAATTCCACCACAAATATaGGCTCCAGGTGACCCCCTCGGCTGGCAACCTTGG +
Preference number: 3 (lower is better)
Translates to: ACLSRGEIPPQI*APGDPLGWQPW
Trigger: CCAAGGTTGCCAGCCGAGGGGGTCACCTGGAGCGCATATTTGTGGTGGAATTTCGCCCCGACTCAGACACGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR-3UTR CAA 90 bp CTGCAGCGTTTTGAGCTTGTGCATCCGGGGCAGCATGGTAGGCATTTCCCAACGGCATGGCCTCTGCAGTaGCTGGCTGGTAGCAGCAGC +
Preference number: 3 (lower is better)
Translates to: LQRFELVHPGQHGRHFPTAWPLQ*LAGSSS
Trigger: GCTGCTGCTACCAGCCAGCAACTGCAGAGGCCATGC...CGTTGGGAAATGCCTACCATGCTGCCCCGGATGCACAAGCTCAAAACGCTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
3UTR TCA 72 bp CGAAGGGTTGTGTACATTGTGAACACGGGGCCTGTGTaGGCCTTGGCCACCAGCCGGATGAGGAAGTGGTCC +
Preference number: 3 (lower is better)
Translates to: RRVVYIVNTGPV*ALATSRMRKWS
Trigger: GGACCACTTCCTCATCCGGCTGGTGGCCAAGGCTCACACAGGCCCCGTGTTCACAATGTACACAACCCTTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR-3UTR CAA 90 bp ATATGCGCTCCAGGTGACCCCCTCGGCTGGCAACCTTGGCACCTTCCTGCCATCGTGGTCTTGATCCCCTaGAAAGCAGCAAACAAAGCC +
Preference number: 3 (lower is better)
Translates to: ICAPGDPLGWQPWHLPAIVVLIP*KAANKA
Trigger: GGCTTTGTTTGCTGCTTTCAAGGGGATCAAGACCAC...GATGGCAGGAAGGTGCCAAGGTTGCCAGCCGAGGGGGTCACCTGGAGCGCATAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR GCA 72 bp AGATTGTTAGCACCGAAGGCCACGGAGAGCATCGTCTaGATTTTGGCAGCTCCCAGGGACCCGATGACCCCT +
Preference number: 3 (lower is better)
Translates to: RLLAPKATESIV*ILAAPRDPMTP
Trigger: AGGGGTCATCGGGTCCCTGGGAGCTGCCAAAATGCAGACGATGCTCTCCGTGGCCTTCGGTGCTAACAATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR GCA 72 bp CAGGTGATCTTCTCAATGACCACGGCTTCAGTTACCTaGTTCCCCAGGGGGACCTCATGCACCTGGCGCTTA +
Preference number: 3 (lower is better)
Translates to: QVIFSMTTASVT*FPRGTSCTWRL
Trigger: TAAGCGCCAGGTGCATGAGGTCCCCCTGGGGAAGCAGGTAACTGAAGCCGTGGTCATTGAGAAGATCACCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR-3UTR CAA 90 bp ATATGCGCTCCAGGTGACCCCCTCGGCTGGCAACCTTGGCACCTTCCTGCCATCAGATTATGGGAGCAGTaGTGTAACTTCTGCAGCGTT +
Preference number: 3 (lower is better)
Translates to: ICAPGDPLGWQPWHLPAIRLWEQ*CNFCSV
Trigger: AACGCTGCAGAAGTTACACAACTGCTCCCATAATCT...GATGGCAGGAAGGTGCCAAGGTTGCCAGCCGAGGGGGTCACCTGGAGCGCATAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR-3UTR CAA 90 bp GAGCATCGTCTGCATTTTGGCAGCTCCCAGGGACCCGATGACCCCTTTCTTGTAGCCTGCTCGAATGGCTaGCGGGGGTTCTTTTTGTGT +
Preference number: 3 (lower is better)
Translates to: EHRLHFGSSQGPDDPFLVACSNG*RGFFLC
Trigger: ACACAAAAAGAACCCCCGCAAGCCATTCGAGCAGGC...TACAAGAAAGGGGTCATCGGGTCCCTGGGAGCTGCCAAAATGCAGACGATGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR-3UTR CAA 90 bp GAGCATCGTCTGCATTTTGGCAGCTCCCAGGGACCCGATGACCCCTTTCTTGTATGTGGATGGAAGGTGTaGTCCCTATCTGGCTGGTGG +
Preference number: 3 (lower is better)
Translates to: EHRLHFGSSQGPDDPFLVCGWKV*SLSGWW
Trigger: CCACCAGCCAGATAGGGACAACACCTTCCATCCACA...TACAAGAAAGGGGTCATCGGGTCCCTGGGAGCTGCCAAAATGCAGACGATGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR TCA 72 bp CATCAGCCTTGTCTGCATTTCGTGGCCAGATTCCAATaGCTTCATCTCCCAGGACGCTTGTCCAGGAGGCCC +
Preference number: 3 (lower is better)
Translates to: HQPCLHFVARFQ*LHLPGRLSRRP
Trigger: GGGCCTCCTGGACAAGCGTCCTGGGAGATGAAGTCATTGGAATCTGGCCACGAAATGCAGACAAGGCTGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR GCA 72 bp GCTCCCTGTGGAGAGGTTCTGAACGATGCCAGCCGCTaGTGTGTGGAAGATGATGTCAGCGCCATCATTAAG +
Preference number: 3 (lower is better)
Translates to: APCGEVLNDASR*CVEDDVSAIIK
Trigger: CTTAATGATGGCGCTGACATCATCTTCCACACAGCAGCGGCTGGCATCGTTCAGAACCTCTCCACAGGGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR CCA 72 bp TGGCTGGTGGCCACCACGTTTCTGTACTTGGGGTGCTaGTTCACTGTGAGACAGAGGATGTCATCTGTGTGC +
Preference number: 3 (lower is better)
Translates to: WLVATTFLYLGC*FTVRQRMSSVC
Trigger: GCACACAGATGACATCCTCTGTCTCACAGTGAACCAGCACCCCAAGTACAGAAACGTGGTGGCCACCAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR CCA 72 bp AGAGGGTGTGTTTGGTCATGGCGTCCCATATGTGGATaGAAGGTGTTGTCCCTATCTGGCTGGTGGCCACCA +
Preference number: 3 (lower is better)
Translates to: RGCVWSWRPICG*KVLSLSGWWPP
Trigger: TGGTGGCCACCAGCCAGATAGGGACAACACCTTCCATCCACATATGGGACGCCATGACCAAACACACCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR CCA 72 bp ATGGAGAGGGTGTGTTTGGTCATGGCGTCCCATATGTaGATGGAAGGTGTTGTCCCTATCTGGCTGGTGGCC +
Preference number: 3 (lower is better)
Translates to: MERVCLVMASHM*MEGVVPIWLVA
Trigger: GGCCACCAGCCAGATAGGGACAACACCTTCCATCCACATATGGGACGCCATGACCAAACACACCCTCTCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR CCA 72 bp GGAAGCACCGCAGCATGGAGAGGGTGTGTTTGGTCATaGCGTCCCATATGTGGATGGAAGGTGTTGTCCCTA +
Preference number: 3 (lower is better)
Translates to: GSTAAWRGCVWS*RPICGWKVLSL
Trigger: TAGGGACAACACCTTCCATCCACATATGGGACGCCATGACCAAACACACCCTCTCCATGCTGCGGTGCTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR CCA 72 bp TGGAGTGGAAGCACCGCAGCATGGAGAGGGTGTGTTTaGTCATGGCGTCCCATATGTGGATGGAAGGTGTTG +
Preference number: 3 (lower is better)
Translates to: WSGSTAAWRGCV*SWRPICGWKVL
Trigger: CAACACCTTCCATCCACATATGGGACGCCATGACCAAACACACCCTCTCCATGCTGCGGTGCTTCCACTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR-3UTR CAA 90 bp GTTGATGTAATTCACCCCCTTGGAGTGGAAGCACCGCAGCATGGAGAGGGTGTGCGTGGCATCACGGTTTaGGAGAGTCCAGATTATGGG +
Preference number: 3 (lower is better)
Translates to: VDVIHPLGVEAPQHGEGVRGITV*ESPDYG
Trigger: CCCATAATCTGGACTCTCCAAAACCGTGATGCCACG...CACACCCTCTCCATGCTGCGGTGCTTCCACTCCAAGGGGGTGAATTACATCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR TCA 72 bp CATTTAGGAAGCCTTGGCGTGAACACAGGACAAGGGTaGCACACTGAATCTGCTAAGGGTCCTGCAGCCCTC +
Preference number: 3 (lower is better)
Translates to: HLGSLGVNTGQG*HTESAKGPAAL
Trigger: GAGGGCTGCAGGACCCTTAGCAGATTCAGTGTGTCACCCTTGTCCTGTGTTCACGCCAAGGCTTCCTAAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
3UTR TCA 72 bp AAGGAAGCTTTGTCAATGCTTCCCGCACACTCTCCGTaGCTTTACGAATGCGCCCGGGGACTCTGCTTAGAG +
Preference number: 3 (lower is better)
Translates to: KEALSMLPAHSP*LYECARGLCLE
Trigger: CTCTAAGCAGAGTCCCCGGGCGCATTCGTAAAGTCACGGAGAGTGTGCGGGAAGCATTGACAAAGCTTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR TCA 72 bp CAATGTTCAGGCCAGCGTGGGTCACACATGCGCAGTTaGCATCAGCCTTGTCTGCATTTCGTGGCCAGATTC +
Preference number: 3 (lower is better)
Translates to: QCSGQRGSHMRS*HQPCLHFVARF
Trigger: GAATCTGGCCACGAAATGCAGACAAGGCTGATGTCAACTGCGCATGTGTGACCCACGCTGGCCTGAACATTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR GCA 72 bp GAGCAGTTGTGTAACTTCTGCAGCGTTTTGAGCTTGTaGATCCGGGGCAGCATGGTAGGCATTTCCCAACGG +
Preference number: 3 (lower is better)
Translates to: EQLCNFCSVLSL*IRGSMVGISQR
Trigger: CCGTTGGGAAATGCCTACCATGCTGCCCCGGATGCACAAGCTCAAAACGCTGCAGAAGTTACACAACTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
3UTR GCA 72 bp ATCTGGCTGGTGGCCACCACGTTTCTGTACTTGGGGTaGTGGTTCACTGTGAGACAGAGGATGTCATCTGTG +
Preference number: 3 (lower is better)
Translates to: IWLVATTFLYLG*WFTVRQRMSSV
Trigger: CACAGATGACATCCTCTGTCTCACAGTGAACCAGCACCCCAAGTACAGAAACGTGGTGGCCACCAGCCAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR GCA 72 bp TCCTGTGACAATGTTCAGGCCAGCGTGGGTCACACATaGGCAGTTGACATCAGCCTTGTCTGCATTTCGTGG +
Preference number: 3 (lower is better)
Translates to: SCDNVQASVGHT*AVDISLVCISW
Trigger: CCACGAAATGCAGACAAGGCTGATGTCAACTGCGCATGTGTGACCCACGCTGGCCTGAACATTGTCACAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR CCA 72 bp TGTAATTCACCCCCTTGGAGTGGAAGCACCGCAGCATaGAGAGGGTGTGTTTGGTCATGGCGTCCCATATGT +
Preference number: 3 (lower is better)
Translates to: CNSPPWSGSTAA*RGCVWSWRPIC
Trigger: ACATATGGGACGCCATGACCAAACACACCCTCTCCATGCTGCGGTGCTTCCACTCCAAGGGGGTGAATTACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR GCA 72 bp GGAGAGTCCAGATTATGGGAGCAGTTGTGTAACTTCTaGAGCGTTTTGAGCTTGTGCATCCGGGGCAGCATG +
Preference number: 3 (lower is better)
Translates to: GESRLWEQLCNF*SVLSLCIRGSM
Trigger: CATGCTGCCCCGGATGCACAAGCTCAAAACGCTGCAGAAGTTACACAACTGCTCCCATAATCTGGACTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
3UTR-3UTR CAA 90 bp AATTTTCGTTCACTGACCAGAAGGACTAATAGGCGTCTATGTGCTCAGAACCACGCATGGCCTCTGCAGTaGCTGGCTGGTAGCAGCAGC +
Preference number: 3 (lower is better)
Translates to: NFRSLTRRTNRRLCAQNHAWPLQ*LAGSSS
Trigger: GCTGCTGCTACCAGCCAGCAACTGCAGAGGCCATGC...GTGGTTCTGAGCACATAGACGCCTATTAGTCCTTCTGGTCAGTGAACGAAAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
3UTR-3UTR CAA 90 bp TTGTGGCAAATTCAGCGGATTTTAAGTATTGACCCTTCGCGGTTGTGGATTCTGGCATGGCCTCTGCAGTaGCTGGCTGGTAGCAGCAGC +
Preference number: 3 (lower is better)
Translates to: LWQIQRILSIDPSRLWILAWPLQ*LAGSSS
Trigger: GCTGCTGCTACCAGCCAGCAACTGCAGAGGCCATGC...CAGAATCCACAACCGCGAAGGGTCAATACTTAAAATCCGCTGAATTTGCCACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR-3UTR CAA 90 bp CTTCAACAGTGTCAGCATTTACCACCAGGAAACTCCCATCGTTCAAGCCAACCGAGGTGGAAGGATCACTaGAGCTTTGGAGGTGGAGGG +
Preference number: 3 (lower is better)
Translates to: LQQCQHLPPGNSHRSSQPRWKDH*SFGGGG
Trigger: CCCTCCACCTCCAAAGCTCAAGTGATCCTTCCACCT...CGGTTGGCTTGAACGATGGGAGTTTCCTGGTGGTAAATGCTGACACTGTTGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673655.1
3UTR-3UTR CAA 90 bp AGTGGCCAGGCCCCAGATCTCCCCTTCCATGTGACCATCAATCAGGATGTTAGAAGAGAAAAGGAAGCTTaGTCAATGCTTCCCGCACAC +
Preference number: 3 (lower is better)
Translates to: SGQAPDLPFHVTINQDVRREKEA*SMLPAH
Trigger: GTGTGCGGGAAGCATTGACAAAGCTTCCTTTTCTCT...TCTAACATCCTGATTGATGGTCACATGGAAGGGGAGATCTGGGGCCTGGCCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR CCA 72 bp TTTTTGGTGATATTGTTCTTCTGCAGTTTCTCAGGCTaGGGAGCTGCTCGGCTAACGGGTGGTCTTGATCCC +
Preference number: 3 (lower is better)
Translates to: FLVILFFCSFSG*GAARLTGGLDP
Trigger: GGGATCAAGACCACCCGTTAGCCGAGCAGCTCCCCAGCCTGAGAAACTGCAGAAGAACAATATCACCAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR-3UTR CAA 90 bp TTTCGTTCACTGACCAGAAGGACTAATAGGCGTCTATGTGCTCAGAACCACCAGCGTGGCATCACGGTTTaGGAGAGTCCAGATTATGGG +
Preference number: 3 (lower is better)
Translates to: FRSLTRRTNRRLCAQNHQRGITV*ESPDYG
Trigger: CCCATAATCTGGACTCTCCAAAACCGTGATGCCACG...CTGGTGGTTCTGAGCACATAGACGCCTATTAGTCCTTCTGGTCAGTGAACGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
3UTR-3UTR CAA 90 bp CACATACTTGTCATCATAAGAGAAACGGATGTTCGTCACGTGAGCCGAGTGACCATGGAGAGGGTGTGTTaGGTCATGGCGTCCCATATG +
Preference number: 3 (lower is better)
Translates to: HILVIIRETDVRHVSRVTMERVC*VMASHM
Trigger: CATATGGGACGCCATGACCAAACACACCCTCTCCAT...GGTCACTCGGCTCACGTGACGAACATCCGTTTCTCTTATGATGACAAGTATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR-3UTR CAA 90 bp GAGCATCGTCTGCATTTTGGCAGCTCCCAGGGACCCGATGACCCCTTTCTTGTACAGAACTTCATATGTTaGACCCCGACAGATACAAAC +
Preference number: 3 (lower is better)
Translates to: EHRLHFGSSQGPDDPFLVQNFIC*TPTDTN
Trigger: GTTTGTATCTGTCGGGGTCAAACATATGAAGTTCTG...TACAAGAAAGGGGTCATCGGGTCCCTGGGAGCTGCCAAAATGCAGACGATGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR TCA 72 bp CCTGTAGTCACTGGTCAGCTACATGGAAAGTGTGACTaGGGGGCTTACGGATGGCTTCTGGTAAAGATTGTC +
Preference number: 3 (lower is better)
Translates to: PVVTGQLHGKCD*GAYGWLLVKIV
Trigger: GACAATCTTTACCAGAAGCCATCCGTAAGCCCCTCAGTCACACTTTCCATGTAGCTGACCAGTGACTACAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
3UTR GCA 72 bp AATAATTCCCAGTGTTTCTTGGTAGGTCAGCCTGCCTaGTCGAATGGCTTGCGGGGGTTCTTTTTGTGTGCA +
Preference number: 3 (lower is better)
Translates to: NNSQCFLVGQPA*SNGLRGFFLCA
Trigger: TGCACACAAAAAGAACCCCCGCAAGCCATTCGAGCAGGCAGGCTGACCTACCAAGAAACACTGGGAATTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR CCA 72 bp CCTTCGTGGCATCACGGTTTTGGAGAGTCCAGATTATaGGAGCAGTTGTGTAACTTCTGCAGCGTTTTGAGC +
Preference number: 3 (lower is better)
Translates to: PSWHHGFGESRL*EQLCNFCSVLS
Trigger: GCTCAAAACGCTGCAGAAGTTACACAACTGCTCCCATAATCTGGACTCTCCAAAACCGTGATGCCACGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
3UTR CCA 72 bp AGTGCACCAGTCTACAAATTCAGAAAGCTCATACCCTaGCGTCTCTGGGCAAACTCTGCACTAAAGCGCCTA +
Preference number: 3 (lower is better)
Translates to: SAPVYKFRKLIP*RLWANSALKRL
Trigger: TAGGCGCTTTAGTGCAGAGTTTGCCCAGAGACGCCAGGGTATGAGCTTTCTGAATTTGTAGACTGGTGCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR TCA 72 bp ACATCCTGTAGTCACTGGTCAGCTACATGGAAAGTGTaGCTGAGGGGCTTACGGATGGCTTCTGGTAAAGAT +
Preference number: 3 (lower is better)
Translates to: TSCSHWSATWKV*LRGLRMASGKD
Trigger: ATCTTTACCAGAAGCCATCCGTAAGCCCCTCAGTCACACTTTCCATGTAGCTGACCAGTGACTACAGGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
3UTR TCA 72 bp ACGTTTAAGTGTATGACAAAAGCAAGCCAGGGGCTATaGGGAGAGCAAGAGGACACTGGAACTATGGCATGG +
Preference number: 3 (lower is better)
Translates to: TFKCMTKASQGL*GEQEDTGTMAW
Trigger: CCATGCCATAGTTCCAGTGTCCTCTTGCTCTCCTCATAGCCCCTGGCTTGCTTTTGTCATACACTTAAACGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR GCA 72 bp CACCAGTCACATGGTTACAGAAAACAGAATTGGGACTaGATAGGGACTCTACTGCGGGCCCAACAACCTATT +
Preference number: 3 (lower is better)
Translates to: HQSHGYRKQNWD*IGTLLRAQQPI
Trigger: AATAGGTTGTTGGGCCCGCAGTAGAGTCCCTATGCAGTCCCAATTCTGTTTTCTGTAACCATGTGACTGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
3UTR CCA 72 bp GTCTACAAATTCAGAAAGCTCATACCCTGGCGTCTCTaGGCAAACTCTGCACTAAAGCGCCTACAGAATAGG +
Preference number: 3 (lower is better)
Translates to: VYKFRKLIPWRL*ANSALKRLQNR
Trigger: CCTATTCTGTAGGCGCTTTAGTGCAGAGTTTGCCCAGAGACGCCAGGGTATGAGCTTTCTGAATTTGTAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR-3UTR CAA 90 bp GTAACCGAGGCTTCAAAATTCGTCAGCGGGCTACATTATCAGATAGGATTTCTTAACTTCTGCAGCGTTTaGAGCTTGTGCATCCGGGGC +
Preference number: 3 (lower is better)
Translates to: VTEASKFVSGLHYQIGFLNFCSV*SLCIRG
Trigger: GCCCCGGATGCACAAGCTCAAAACGCTGCAGAAGTT...AAGAAATCCTATCTGATAATGTAGCCCGCTGACGAATTTTGAAGCCTCGGTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
3UTR-3UTR CAA 90 bp ATCACGGTTTTGGAGAGTCCAGATTATGGGAGCAGTTGTGTAACTTCTGCAGCGTTGTTTAACAGCTTCTaGTCAGCCAGGTCCCAGATC +
Preference number: 3 (lower is better)
Translates to: ITVLESPDYGSSCVTSAALFNSF*SARSQI
Trigger: GATCTGGGACCTGGCTGACAAGAAGCTGTTAAACAA...CGCTGCAGAAGTTACACAACTGCTCCCATAATCTGGACTCTCCAAAACCGTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR-3UTR CAA 90 bp CTTCCACATGGTTATTTCAATGCAAGATCCGATCAGCATGAAGAGTCTAGTACAAACTTCTGCAGCGTTTaGAGCTTGTGCATCCGGGGC +
Preference number: 3 (lower is better)
Translates to: LPHGYFNARSDQHEESSTNFCSV*SLCIRG
Trigger: GCCCCGGATGCACAAGCTCAAAACGCTGCAGAAGTT...TGTACTAGACTCTTCATGCTGATCGGATCTTGCATTGAAATAACCATGTGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
3UTR-3UTR CAA 90 bp GCAGCCCACACAACTGGAAACTTTCAAAGGCACTTAATGGATATAAAACTCTGCCGTGGCATCACGGTTTaGGAGAGTCCAGATTATGGG +
Preference number: 3 (lower is better)
Translates to: AAHTTGNFQRHLMDIKLCRGITV*ESPDYG
Trigger: CCCATAATCTGGACTCTCCAAAACCGTGATGCCACG...GCAGAGTTTTATATCCATTAAGTGCCTTTGAAAGTTTCCAGTTGTGTGGGCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
3UTR-3UTR CAA 90 bp GATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACAGAAAACCACCAAGGTGCAGCCTaGGGTTACCCTCATTTATCT +
Preference number: 3 (lower is better)
Translates to: DRQTWLSLCITSHMVTENHQGAA*GYPHLS
Trigger: AGATAAATGAGGGTAACCCAAGGCTGCACCTTGGTG...GTTTTCTGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
3UTR-3UTR CAA 90 bp TACAAGATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACAGCACCAAGGTGCAGCCTaGGGTTACCCTCATTTATCT +
Preference number: 3 (lower is better)
Translates to: YKIGRHGYHSASPVTWLQHQGAA*GYPHLS
Trigger: AGATAAATGAGGGTAACCCAAGGCTGCACCTTGGTG...CTGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATCTTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
3UTR-3UTR CAA 90 bp AATTTTCGTTCACTGACCAGAAGGACTAATAGGCGTCTATGTGCTCAGAACCACACCAAACACCTGTGTTaGTCTCCAGAGCGGTGTGAA +
Preference number: 3 (lower is better)
Translates to: NFRSLTRRTNRRLCAQNHTKHLC*SPERCE
Trigger: TTCACACCGCTCTGGAGACAAACACAGGTGTTTGGT...GTGGTTCTGAGCACATAGACGCCTATTAGTCCTTCTGGTCAGTGAACGAAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR TCA 72 bp GGACTTGACCTATATAGTTCGCCTGAAGCAATCAAATaGAGTCACCTCAACTCCACTCAGGGTGGTACACCA +
Preference number: 3 (lower is better)
Translates to: GLDLYSSPEAIK*SHLNSTQGGTP
Trigger: TGGTGTACCACCCTGAGTGGAGTTGAGGTGACTTCATTTGATTGCTTCAGGCGAACTATATAGGTCAAGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
3UTR TCA 72 bp AGCAACCACCTCATTCATGCACAAGCATTTTCCAAGTaGACAGACATTCCTGTGTGGCACACACCATGCTTC +
Preference number: 3 (lower is better)
Translates to: SNHLIHAQAFSK*TDIPVWHTPCF
Trigger: GAAGCATGGTGTGTGCCACACAGGAATGTCTGTTCACTTGGAAAATGCTTGTGCATGAATGAGGTGGTTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR TCA 72 bp GCCACACAAATACACTGCAGTCGTCTCCTCCAGTGCTaGCCACATACTTGTCATCATAAGAGAAACGGATGT +
Preference number: 3 (lower is better)
Translates to: ATQIHCSRLLQC*PHTCHHKRNGC
Trigger: ACATCCGTTTCTCTTATGATGACAAGTATGTGGTCAGCACTGGAGGAGACGACTGCAGTGTATTTGTGTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR GCA 72 bp AGTCACCTCAACTCCACTCAGGGTGGTACACCAAGGTaGAGCCTTGGGTTACCCTCATTTATCTTAAGATTT +
Preference number: 3 (lower is better)
Translates to: SHLNSTQGGTPR*SLGLPSFILRF
Trigger: AAATCTTAAGATAAATGAGGGTAACCCAAGGCTGCACCTTGGTGTACCACCCTGAGTGGAGTTGAGGTGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
3UTR GCA 72 bp GCCACCAAATTGAGCAAAATCGGGAGACTGGGGGCATaGCAGTTCTCACAATTAGACACTTCCTTCACATTA +
Preference number: 3 (lower is better)
Translates to: ATKLSKIGRLGA*QFSQLDTSFTL
Trigger: TAATGTGAAGGAAGTGTCTAATTGTGAGAACTGGCATGCCCCCAGTCTCCCGATTTTGCTCAATTTGGTGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR GCA 72 bp CAGAACTTCATATGTTTGACCCCGACAGATACAAACTaGGTGTCTGAGTCGGGGCGAAATTCCACCACAAAT +
Preference number: 3 (lower is better)
Translates to: QNFICLTPTDTN*VSESGRNSTTN
Trigger: ATTTGTGGTGGAATTTCGCCCCGACTCAGACACGCAGTTTGTATCTGTCGGGGTCAAACATATGAAGTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR CCA 72 bp GGCAGACATGGTTATCACTCTGCATCACCAGTCACATaGTTACAGAAAACAGAATTGGGACTGCATAGGGAC +
Preference number: 3 (lower is better)
Translates to: GRHGYHSASPVT*LQKTELGLHRD
Trigger: GTCCCTATGCAGTCCCAATTCTGTTTTCTGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
3UTR-3UTR CAA 90 bp CACATACTTGTCATCATAAGAGAAACGGATGTTCGTCACGTGAGCCGAGTGACCCTCATAAGGCATTATTaGAGGATAAACACAGGGCTC +
Preference number: 3 (lower is better)
Translates to: HILVIIRETDVRHVSRVTLIRHY*RINTGL
Trigger: GAGCCCTGTGTTTATCCTCAAATAATGCCTTATGAG...GGTCACTCGGCTCACGTGACGAACATCCGTTTCTCTTATGATGACAAGTATGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR TCA 72 bp TTTTCCCCCAAACTTTCAGGCTGTTCACCAACAAGATaGCAAACTCTCCATTCTTCATGCCAATGGCCACCA +
Preference number: 3 (lower is better)
Translates to: FSPKLSGCSPTR*QTLHSSCQWPP
Trigger: TGGTGGCCATTGGCATGAAGAATGGAGAGTTTGTCATCTTGTTGGTGAACAGCCTGAAAGTTTGGGGGAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR-3UTR CAA 90 bp CCAACTCCAAGGAACTCTAACTCACTTTATAATTTTGATTTACCAGCTATTCCTTGCAGCGTTTTGAGCTaGTGCATCCGGGGCAGCATG +
Preference number: 3 (lower is better)
Translates to: PTPRNSNSLYNFDLPAIPCSVLS*CIRGSM
Trigger: CATGCTGCCCCGGATGCACAAGCTCAAAACGCTGCA...AGGAATAGCTGGTAAATCAAAATTATAAAGTGAGTTAGAGTTCCTTGGAGTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
3UTR-3UTR CAA 90 bp AAAGTTTTGATGCAAATTAAAAGCTACATATTGGTTAGGGTAACCGAGGCTTCATGCAGCGTTTTGAGCTaGTGCATCCGGGGCAGCATG +
Preference number: 3 (lower is better)
Translates to: KVLMQIKSYILVRVTEASCSVLS*CIRGSM
Trigger: CATGCTGCCCCGGATGCACAAGCTCAAAACGCTGCA...TGAAGCCTCGGTTACCCTAACCAATATGTAGCTTTTAATTTGCATCAAAACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
3UTR-3UTR CAA 90 bp GTACAAGATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACAAGATTATGGGAGCAGTaGTGTAACTTCTGCAGCGTT +
Preference number: 3 (lower is better)
Translates to: VQDRQTWLSLCITSHMVTRLWEQ*CNFCSV
Trigger: AACGCTGCAGAAGTTACACAACTGCTCCCATAATCT...TGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATCTTGTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
3UTR-3UTR CAA 90 bp TGCTGCTCACCTTCCCATAAGCAGGTAACCGATGTCTTTCATTTAGGAAGCCTTTTACAGAAAACAGAATaGGGACTGCATAGGGACTCT +
Preference number: 3 (lower is better)
Translates to: CCSPSHKQVTDVFHLGSLLQKTE*GLHRDS
Trigger: AGAGTCCCTATGCAGTCCCAATTCTGTTTTCTGTAA...AAGGCTTCCTAAATGAAAGACATCGGTTACCTGCTTATGGGAAGGTGAGCAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
3UTR-3UTR CAA 90 bp ACTTGTCATCATAAGAGAAACGGATGTTCGTCACGTGAGCCGAGTGACCGAAGTGACACACGGACACTATaGCTCTTTAAATATGGTTGT +
Preference number: 3 (lower is better)
Translates to: TCHHKRNGCSSREPSDRSDTRTL*LFKYGC
Trigger: ACAACCATATTTAAAGAGCAATAGTGTCCGTGTGTC...ACTTCGGTCACTCGGCTCACGTGACGAACATCCGTTTCTCTTATGATGACAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR-3UTR CAA 90 bp GCAGCCCACACAACTGGAAACTTTCAAAGGCACTTAATGGATATAAAACTCTGCGGGAAGAAACCTGCATaGTGGCAAATTCAGCGGATT +
Preference number: 3 (lower is better)
Translates to: AAHTTGNFQRHLMDIKLCGKKPA*WQIQRI
Trigger: AATCCGCTGAATTTGCCACAATGCAGGTTTCTTCCC...GCAGAGTTTTATATCCATTAAGTGCCTTTGAAAGTTTCCAGTTGTGTGGGCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR CCA 72 bp ATTCAGCGGATTTTAAGTATTGACCCTTCGCGGTTGTaGATTCTGCGTGAACACTTAGTACTGGATGTTCAC +
Preference number: 3 (lower is better)
Translates to: IQRILSIDPSRL*ILREHLVLDVH
Trigger: GTGAACATCCAGTACTAAGTGTTCACGCAGAATCCACAACCGCGAAGGGTCAATACTTAAAATCCGCTGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR CCA 72 bp ATCAGCATGAAGAGTCTAGTACAAGATAGGCAGACATaGTTATCACTCTGCATCACCAGTCACATGGTTACA +
Preference number: 3 (lower is better)
Translates to: ISMKSLVQDRQT*LSLCITSHMVT
Trigger: TGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATCTTGTACTAGACTCTTCATGCTGAT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
3UTR-3UTR CAA 90 bp CTTCCACATGGTTATTTCAATGCAAGATCCGATCAGCATGAAGAGTCTAGTACAAGATTATGGGAGCAGTaGTGTAACTTCTGCAGCGTT +
Preference number: 3 (lower is better)
Translates to: LPHGYFNARSDQHEESSTRLWEQ*CNFCSV
Trigger: AACGCTGCAGAAGTTACACAACTGCTCCCATAATCT...TGTACTAGACTCTTCATGCTGATCGGATCTTGCATTGAAATAACCATGTGGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
3UTR-3UTR CAA 90 bp TACAAGATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACAGATTAAAAGCTACATATaGGTTAGGGTAACCGAGGCT +
Preference number: 3 (lower is better)
Translates to: YKIGRHGYHSASPVTWLQIKSYI*VRVTEA
Trigger: AGCCTCGGTTACCCTAACCAATATGTAGCTTTTAAT...CTGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATCTTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
3UTR-3UTR CAA 90 bp AAAGTTTTGATGCAAATTAAAAGCTACATATTGGTTAGGGTAACCGAGGCTTCAATTGACCCTTCGCGGTaGTGGATTCTGCGTGAACAC +
Preference number: 3 (lower is better)
Translates to: KVLMQIKSYILVRVTEASIDPSR*WILREH
Trigger: GTGTTCACGCAGAATCCACAACCGCGAAGGGTCAAT...TGAAGCCTCGGTTACCCTAACCAATATGTAGCTTTTAATTTGCATCAAAACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR-3UTR CAA 90 bp AATTTTCGTTCACTGACCAGAAGGACTAATAGGCGTCTATGTGCTCAGAACCACTTTACCAGCTATTCCTaGGGTTTACAATTTGTTCTG +
Preference number: 3 (lower is better)
Translates to: NFRSLTRRTNRRLCAQNHFTSYS*GLQFVL
Trigger: CAGAACAAATTGTAAACCCAAGGAATAGCTGGTAAA...GTGGTTCTGAGCACATAGACGCCTATTAGTCCTTCTGGTCAGTGAACGAAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
3UTR-3UTR CAA 90 bp CTTCCACATGGTTATTTCAATGCAAGATCCGATCAGCATGAAGAGTCTAGTACATTACAGAAAACAGAATaGGGACTGCATAGGGACTCT +
Preference number: 3 (lower is better)
Translates to: LPHGYFNARSDQHEESSTLQKTE*GLHRDS
Trigger: AGAGTCCCTATGCAGTCCCAATTCTGTTTTCTGTAA...TGTACTAGACTCTTCATGCTGATCGGATCTTGCATTGAAATAACCATGTGGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
3UTR-3UTR CAA 90 bp CTTCCACATGGTTATTTCAATGCAAGATCCGATCAGCATGAAGAGTCTAGTACAATTAAAAGCTACATATaGGTTAGGGTAACCGAGGCT +
Preference number: 3 (lower is better)
Translates to: LPHGYFNARSDQHEESSTIKSYI*VRVTEA
Trigger: AGCCTCGGTTACCCTAACCAATATGTAGCTTTTAAT...TGTACTAGACTCTTCATGCTGATCGGATCTTGCATTGAAATAACCATGTGGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
3UTR TCA 72 bp AGTGATAATTGGACCAAACGGTATTATAATCACCACTaGAGAATGGGTAGACAGCACATCTCTGCAAAACGA +
Preference number: 3 (lower is better)
Translates to: SDNWTKRYYNHH*RMGRQHISAKR
Trigger: TCGTTTTGCAGAGATGTGCTGTCTACCCATTCTTCAGTGGTGATTATAATACCGTTTGGTCCAATTATCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR GCA 72 bp AGTCTAGTACAAGATAGGCAGACATGGTTATCACTCTaGATCACCAGTCACATGGTTACAGAAAACAGAATT +
Preference number: 3 (lower is better)
Translates to: SLVQDRQTWLSL*ITSHMVTENRI
Trigger: AATTCTGTTTTCTGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATCTTGTACTAGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
3UTR TCA 72 bp GTTTCTCAACTCCTTTATACATGGCTCATTTGGTTTTaGAAGCTAAACTGGAGAACAGAGGCTAGCGATATT +
Preference number: 3 (lower is better)
Translates to: VSQLLYTWLIWF*KLNWRTEASDI
Trigger: AATATCGCTAGCCTCTGTTCTCCAGTTTAGCTTTCAAAACCAAATGAGCCATGTATAAAGGAGTTGAGAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
3UTR TCA 72 bp CTATTTTGGATTTTGTGGGTTTGGCATGAAACACAATaGAAACCCATAATTCTACCCTGTCCCGAACTTCAA +
Preference number: 3 (lower is better)
Translates to: LFWILWVWHETQ*KPIILPCPELQ
Trigger: TTGAAGTTCGGGACAGGGTAGAATTATGGGTTTTCATTGTGTTTCATGCCAAACCCACAAAATCCAAAATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
3UTR TCA 72 bp GGACTCTACTGCGGGCCCAACAACCTATTAGTGGATTaGTGTAAGGCATTAGTAAATTGGCATATAAAAATA +
Preference number: 3 (lower is better)
Translates to: GLYCGPNNLLVD*CKALVNWHIKI
Trigger: TATTTTTATATGCCAATTTACTAATGCCTTACATCAATCCACTAATAGGTTGTTGGGCCCGCAGTAGAGTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
3UTR TCA 72 bp TTTGAAAACTTAATATCAGAGATCATTTCTTTTCTGTaGTGGAAAGAGACCATGTCTTCAACAGTGTCAGCA +
Preference number: 3 (lower is better)
Translates to: FENLISEIISFL*WKETMSSTVSA
Trigger: TGCTGACACTGTTGAAGACATGGTCTCTTTCCATCACAGAAAAGAAATGATCTCTGATATTAAGTTTTCAAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000673655.1
ENST00000673746.1
ENST00000673916.1
ENST00000674035.1
CDS-3UTR CCA 90 bp GAGGCACCTCAGCATGGCCTCTGCAGTTGCTGGCTGGTAGCAGCAGCAGCAATACGTCCTCGCCGAGGCTaGGGCTGCGGCGGACCTGCA +
Preference number: 4 (lower is better)
Translates to: EAPQHGLCSCWLVAAAAIRPRRG*GCGGPA
Trigger: TGCAGGTCCGCCGCAGCCCCAGCCTCGGCGAGGACG...TATTGCTGCTGCTGCTACCAGCCAGCAACTGCAGAGGCCATGCTGAGGTGCCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356458.7
ENST00000673912.1
CDS-3UTR TCA 90 bp ATATGCGCTCCAGGTGACCCCCTCGGCTGGCAACCTTGGCACCTTCCTGCCATCCCCGCACACTCTCCGTaGCTTTACGAATGCGCCCGG +
Preference number: 4 (lower is better)
Translates to: ICAPGDPLGWQPWHLPAIPAHSP*LYECAR
Trigger: CCGGGCGCATTCGTAAAGTCACGGAGAGTGTGCGGG...GATGGCAGGAAGGTGCCAAGGTTGCCAGCCGAGGGGGTCACCTGGAGCGCATAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR CCA 90 bp ATATGCGCTCCAGGTGACCCCCTCGGCTGGCAACCTTGGCACCTTCCTGCCATCCCTTGGAAGGGTGAGTaGCCAGGCCCCAGATCTCCC +
Preference number: 4 (lower is better)
Translates to: ICAPGDPLGWQPWHLPAIPWKGE*PGPRSP
Trigger: GGGAGATCTGGGGCCTGGCCACTCACCCTTCCAAGG...GATGGCAGGAAGGTGCCAAGGTTGCCAGCCGAGGGGGTCACCTGGAGCGCATAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR TCA 90 bp TCTGGCTCCCTGTGGAGAGGTTCTGAACGATGCCAGCCGCTGCTGTGTGGAAGAGACAGGCAACCCGGGTaGGCTCTGCCATCGCCGTCT +
Preference number: 4 (lower is better)
Translates to: SGSLWRGSERCQPLLCGRDRQPG*ALPSPS
Trigger: AGACGGCGATGGCAGAGCTCACCCGGGTTGCCTGTC...TCTTCCACACAGCAGCGGCTGGCATCGTTCAGAACCTCTCCACAGGGAGCCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR CCA 90 bp CGAATGCGCCCGGGGACTCTGCTTAGAGTGTGCTGGGGAGAAACTTGCTGTCAGCAGCCAGAGGCTTCTTaGGGTGCAGGGCCAGAGCCC +
Preference number: 4 (lower is better)
Translates to: RMRPGTLLRVCWGETCCQQPEAS*GAGPEP
Trigger: GGGCTCTGGCCCTGCACCCCAAGAAGCCTCTGGCTG...CTGACAGCAAGTTTCTCCCCAGCACACTCTAAGCAGAGTCCCCGGGCGCATTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR TCA 90 bp CTGCAGCGTTTTGAGCTTGTGCATCCGGGGCAGCATGGTAGGCATTTCCCAACGGACAGGCAACCCGGGTaGGCTCTGCCATCGCCGTCT +
Preference number: 4 (lower is better)
Translates to: LQRFELVHPGQHGRHFPTDRQPG*ALPSPS
Trigger: AGACGGCGATGGCAGAGCTCACCCGGGTTGCCTGTC...CGTTGGGAAATGCCTACCATGCTGCCCCGGATGCACAAGCTCAAAACGCTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356458.7
ENST00000673912.1
CDS-3UTR TCA 90 bp AGTGGCCAGGCCCCAGATCTCCCCTTCCATGTGACCATCAATCAGGATGTTAGACGCGGCGCAGGGCGCTaGTTTCCGCGGCGACACACA +
Preference number: 4 (lower is better)
Translates to: SGQAPDLPFHVTINQDVRRGAGR*FPRRHT
Trigger: TGTGTGTCGCCGCGGAAATCAGCGCCCTGCGCCGCG...TCTAACATCCTGATTGATGGTCACATGGAAGGGGAGATCTGGGGCCTGGCCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR GCA 90 bp ATCTCCCAGGACGCTTGTCCAGGAGGCCCAGGTGATCTTCTCAATGACCACGGCTCGCTCACTGAAGTTTaGGGTGCGCCGGGGCTTCGC +
Preference number: 4 (lower is better)
Translates to: ISQDACPGGPGDLLNDHGSLTEV*GAPGLR
Trigger: GCGAAGCCCCGGCGCACCGCAAACTTCAGTGAGCGA...GCCGTGGTCATTGAGAAGATCACCTGGGCCTCCTGGACAAGCGTCCTGGGAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR CCA 90 bp CTGCAGCGTTTTGAGCTTGTGCATCCGGGGCAGCATGGTAGGCATTTCCCAACGGATGGACTTCGTCACTaGGGCGCCGCGGGAGACAGG +
Preference number: 4 (lower is better)
Translates to: LQRFELVHPGQHGRHFPTDGLRH*GAAGDR
Trigger: CCTGTCTCCCGCGGCGCCCCAGTGACGAAGTCCATC...CGTTGGGAAATGCCTACCATGCTGCCCCGGATGCACAAGCTCAAAACGCTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356458.7
ENST00000673912.1
CDS-3UTR TCA 90 bp CTGCAGCGTTTTGAGCTTGTGCATCCGGGGCAGCATGGTAGGCATTTCCCAACGCGGGCGATCAAGGCATaGTCAGCCAGGCTCCACAGC +
Preference number: 4 (lower is better)
Translates to: LQRFELVHPGQHGRHFPTRAIKA*SARLHS
Trigger: GCTGTGGAGCCTGGCTGATCATGCCTTGATCGCCCG...CGTTGGGAAATGCCTACCATGCTGCCCCGGATGCACAAGCTCAAAACGCTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp ATATGCGCTCCAGGTGACCCCCTCGGCTGGCAACCTTGGCACCTTCCTGCCATCCCTCCACTGGAAAACTaGGTGATCAGCCCCTCCTGT +
Preference number: 4 (lower is better)
Translates to: ICAPGDPLGWQPWHLPAIPPLEN*VISPSC
Trigger: ACAGGAGGGGCTGATCACTCAGTTTTCCAGTGGAGG...GATGGCAGGAAGGTGCCAAGGTTGCCAGCCGAGGGGGTCACCTGGAGCGCATAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR GCA 90 bp CTGCAGCGTTTTGAGCTTGTGCATCCGGGGCAGCATGGTAGGCATTTCCCAACGAGAGGCTTCTTGGGGTaGAGGGCCAGAGCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: LQRFELVHPGQHGRHFPTRGFLG*RARAQS
Trigger: GCTCTGGGCTCTGGCCCTGCACCCCAAGAAGCCTCT...CGTTGGGAAATGCCTACCATGCTGCCCCGGATGCACAAGCTCAAAACGCTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp TCTGGCTCCCTGTGGAGAGGTTCTGAACGATGCCAGCCGCTGCTGTGTGGAAGACGCTGTCCACCAGCTTaGTCTCCTGGGTCCCCACAA +
Preference number: 4 (lower is better)
Translates to: SGSLWRGSERCQPLLCGRRCPPA*SPGSPQ
Trigger: TTGTGGGGACCCAGGAGAGCAAGCTGGTGGACAGCG...TCTTCCACACAGCAGCGGCTGGCATCGTTCAGAACCTCTCCACAGGGAGCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR CCA 90 bp TCTGGCTCCCTGTGGAGAGGTTCTGAACGATGCCAGCCGCTGCTGTGTGGAAGAGGAGGCACCTCAGCATaGCCTCTGCAGTTGCTGGCT +
Preference number: 4 (lower is better)
Translates to: SGSLWRGSERCQPLLCGRGGTSA*PLQLLA
Trigger: AGCCAGCAACTGCAGAGGCCATGCTGAGGTGCCTCC...TCTTCCACACAGCAGCGGCTGGCATCGTTCAGAACCTCTCCACAGGGAGCCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR TCA 90 bp GAGCATCGTCTGCATTTTGGCAGCTCCCAGGGACCCGATGACCCCTTTCTTGTAAATATGCGCTCCAGGTaGCCCCCTCGGCTGGCAACC +
Preference number: 4 (lower is better)
Translates to: EHRLHFGSSQGPDDPFLVNMRSR*PPRLAT
Trigger: GGTTGCCAGCCGAGGGGGTCACCTGGAGCGCATATT...TACAAGAAAGGGGTCATCGGGTCCCTGGGAGCTGCCAAAATGCAGACGATGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR TCA 90 bp GAGGCACCTCAGCATGGCCTCTGCAGTTGCTGGCTGGTAGCAGCAGCAGCAATATTCCGCCGGTCACTATaGGTCCATCCCGAAGGGTTG +
Preference number: 4 (lower is better)
Translates to: EAPQHGLCSCWLVAAAAIFRRSL*VHPEGL
Trigger: CAACCCTTCGGGATGGACTCATAGTGACCGGCGGAA...TATTGCTGCTGCTGCTACCAGCCAGCAACTGCAGAGGCCATGCTGAGGTGCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp AGATTGTTAGCACCGAAGGCCACGGAGAGCATCGTCTGCATTTTGGCAGCTCCCAGAGGCTTCTTGGGGTaGAGGGCCAGAGCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: RLLAPKATESIVCILAAPRGFLG*RARAQS
Trigger: GCTCTGGGCTCTGGCCCTGCACCCCAAGAAGCCTCT...GGGAGCTGCCAAAATGCAGACGATGCTCTCCGTGGCCTTCGGTGCTAACAATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR GCA 90 bp ATATGCGCTCCAGGTGACCCCCTCGGCTGGCAACCTTGGCACCTTCCTGCCATCTCCACCTTCTTGGGGTaGAGTTTCCAGCATGCCGTT +
Preference number: 4 (lower is better)
Translates to: ICAPGDPLGWQPWHLPAISTFLG*SFQHAV
Trigger: AACGGCATGCTGGAAACTGCACCCCAAGAAGGTGGA...GATGGCAGGAAGGTGCCAAGGTTGCCAGCCGAGGGGGTCACCTGGAGCGCATAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR GCA 90 bp CCACCAGGAAACTCCCATCGTTCAAGCCAACCGCTAAGGCTTTCCCATCAGGGGCAGGAGAGGGTGAGCTaGCAACCCCCACACTTCTCC +
Preference number: 4 (lower is better)
Translates to: PPGNSHRSSQPLRLSHQGQERVS*QPPHFS
Trigger: GGAGAAGTGTGGGGGTTGGCAGCTCACCCTCTCCTG...CCCCTGATGGGAAAGCCTTAGCGGTTGGCTTGAACGATGGGAGTTTCCTGGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000673655.1
ENST00000673746.1
ENST00000673916.1
ENST00000674035.1
CDS-3UTR GCA 90 bp AGATTGTTAGCACCGAAGGCCACGGAGAGCATCGTCTGCATTTTGGCAGCTCCCCTCAGGCTGGGGAGCTaGTCGGCTAACGGGTGGTCT +
Preference number: 4 (lower is better)
Translates to: RLLAPKATESIVCILAAPLRLGS*SANGWS
Trigger: AGACCACCCGTTAGCCGAGCAGCTCCCCAGCCTGAG...GGGAGCTGCCAAAATGCAGACGATGCTCTCCGTGGCCTTCGGTGCTAACAATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR GCA 90 bp GAGGCACCTCAGCATGGCCTCTGCAGTTGCTGGCTGGTAGCAGCAGCAGCAATACAGACAGTGATGGTGTaGTCAGGGTCCACTCCCACC +
Preference number: 4 (lower is better)
Translates to: EAPQHGLCSCWLVAAAAIQTVMV*SGSTPT
Trigger: GGTGGGAGTGGACCCTGAGCACACCATCACTGTCTG...TATTGCTGCTGCTGCTACCAGCCAGCAACTGCAGAGGCCATGCTGAGGTGCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp AGATTGTTAGCACCGAAGGCCACGGAGAGCATCGTCTGCATTTTGGCAGCTCCCTGCGCCCGGGGACTCTaGTTAGAGTGTGCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: RLLAPKATESIVCILAAPCARGL*LECAGE
Trigger: CTCCCCAGCACACTCTAAGCAGAGTCCCCGGGCGCA...GGGAGCTGCCAAAATGCAGACGATGCTCTCCGTGGCCTTCGGTGCTAACAATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR CCA 90 bp GAGGCACCTCAGCATGGCCTCTGCAGTTGCTGGCTGGTAGCAGCAGCAGCAATATGCAGTTTCTCAGGCTaGGGAGCTGCTCGGCTAACG +
Preference number: 4 (lower is better)
Translates to: EAPQHGLCSCWLVAAAAICSFSG*GAARLT
Trigger: CGTTAGCCGAGCAGCTCCCCAGCCTGAGAAACTGCA...TATTGCTGCTGCTGCTACCAGCCAGCAACTGCAGAGGCCATGCTGAGGTGCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp ATCTCCCAGGACGCTTGTCCAGGAGGCCCAGGTGATCTTCTCAATGACCACGGCTTCACCCCCTTGGAGTaGAAGCACCGCAGCATGGAG +
Preference number: 4 (lower is better)
Translates to: ISQDACPGGPGDLLNDHGFTPLE*KHRSME
Trigger: CTCCATGCTGCGGTGCTTCCACTCCAAGGGGGTGAA...GCCGTGGTCATTGAGAAGATCACCTGGGCCTCCTGGACAAGCGTCCTGGGAGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR CCA 90 bp TCTGGCTCCCTGTGGAGAGGTTCTGAACGATGCCAGCCGCTGCTGTGTGGAAGAGCACACCTGGCCGCATaGCCCAAGCTCACCTTGTTT +
Preference number: 4 (lower is better)
Translates to: SGSLWRGSERCQPLLCGRAHLAA*PKLTLF
Trigger: AAACAAGGTGAGCTTGGGCCATGCGGCCAGGTGTGC...TCTTCCACACAGCAGCGGCTGGCATCGTTCAGAACCTCTCCACAGGGAGCCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR TCA 90 bp ATCACGGTTTTGGAGAGTCCAGATTATGGGAGCAGTTGTGTAACTTCTGCAGCGCGCGGCGCAGGGCGCTaGTTTCCGCGGCGACACACA +
Preference number: 4 (lower is better)
Translates to: ITVLESPDYGSSCVTSAARGAGR*FPRRHT
Trigger: TGTGTGTCGCCGCGGAAATCAGCGCCCTGCGCCGCG...CGCTGCAGAAGTTACACAACTGCTCCCATAATCTGGACTCTCCAAAACCGTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356458.7
ENST00000673912.1
CDS-3UTR TCA 90 bp GAGGCACCTCAGCATGGCCTCTGCAGTTGCTGGCTGGTAGCAGCAGCAGCAATAGAGCCTTTTCTCGTTTaGGGAAGGGCACTGCGTGGT +
Preference number: 4 (lower is better)
Translates to: EAPQHGLCSCWLVAAAAIEPFLV*GRALRG
Trigger: ACCACGCAGTGCCCTTCCTCAAACGAGAAAAGGCTC...TATTGCTGCTGCTGCTACCAGCCAGCAACTGCAGAGGCCATGCTGAGGTGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp GAGGCACCTCAGCATGGCCTCTGCAGTTGCTGGCTGGTAGCAGCAGCAGCAATAGAAATTGGTGGGAGGTaGGACAGCAGCCCACACAAC +
Preference number: 4 (lower is better)
Translates to: EAPQHGLCSCWLVAAAAIEIGGR*DSSPHN
Trigger: GTTGTGTGGGCTGCTGTCTCACCTCCCACCAATTTC...TATTGCTGCTGCTGCTACCAGCCAGCAACTGCAGAGGCCATGCTGAGGTGCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp TCTGGCTCCCTGTGGAGAGGTTCTGAACGATGCCAGCCGCTGCTGTGTGGAAGACCCAGAGCTCCACGATaGCGTCCTTTCCACCTGTTA +
Preference number: 4 (lower is better)
Translates to: SGSLWRGSERCQPLLCGRPRAPR*RPFHLL
Trigger: TAACAGGTGGAAAGGACGGCATCGTGGAGCTCTGGG...TCTTCCACACAGCAGCGGCTGGCATCGTTCAGAACCTCTCCACAGGGAGCCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR GCA 90 bp CTCCCATCGTTCAAGCCAACCGCTAAGGCTTTCCCATCAGGGGAAAAGGCACAGCAGGAGAGGGTGAGCTaGCAACCCCCACACTTCTCC +
Preference number: 4 (lower is better)
Translates to: LPSFKPTAKAFPSGEKAQQERVS*QPPHFS
Trigger: GGAGAAGTGTGGGGGTTGGCAGCTCACCCTCTCCTG...CTGTGCCTTTTCCCCTGATGGGAAAGCCTTAGCGGTTGGCTTGAACGATGGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000673655.1
ENST00000673746.1
ENST00000673916.1
ENST00000674035.1
CDS-3UTR GCA 90 bp AATGAAGTCACCTCAACTCCACTCAGGGTGGTACACCAAGGTGCAGCCTTGGGTCTCAGGCTGGGGAGCTaGTCGGCTAACGGGTGGTCT +
Preference number: 4 (lower is better)
Translates to: NEVTSTPLRVVHQGAALGLRLGS*SANGWS
Trigger: AGACCACCCGTTAGCCGAGCAGCTCCCCAGCCTGAG...ACCCAAGGCTGCACCTTGGTGTACCACCCTGAGTGGAGTTGAGGTGACTTCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp GAGGCACCTCAGCATGGCCTCTGCAGTTGCTGGCTGGTAGCAGCAGCAGCAATAGGTGGTACACCAAGGTaGAGCCTTGGGTTACCCTCA +
Preference number: 4 (lower is better)
Translates to: EAPQHGLCSCWLVAAAAIGGTPR*SLGLPS
Trigger: TGAGGGTAACCCAAGGCTGCACCTTGGTGTACCACC...TATTGCTGCTGCTGCTACCAGCCAGCAACTGCAGAGGCCATGCTGAGGTGCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp CTGCAGCGTTTTGAGCTTGTGCATCCGGGGCAGCATGGTAGGCATTTCCCAACGCCAGCCGCTGCTGTGTaGAAGATGATGTCAGCGCCA +
Preference number: 4 (lower is better)
Translates to: LQRFELVHPGQHGRHFPTPAAAV*KMMSAP
Trigger: TGGCGCTGACATCATCTTCCACACAGCAGCGGCTGG...CGTTGGGAAATGCCTACCATGCTGCCCCGGATGCACAAGCTCAAAACGCTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp ATCTCCCAGGACGCTTGTCCAGGAGGCCCAGGTGATCTTCTCAATGACCACGGCAGCTCTGGCTCCCTGTaGAGAGGTTCTGAACGATGC +
Preference number: 4 (lower is better)
Translates to: ISQDACPGGPGDLLNDHGSSGSL*RGSERC
Trigger: GCATCGTTCAGAACCTCTCCACAGGGAGCCAGAGCT...GCCGTGGTCATTGAGAAGATCACCTGGGCCTCCTGGACAAGCGTCCTGGGAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR CCA 90 bp CTTGTCAGCCAGGTCCCAGATCCGGGCTGTGCCATCGTTGCTGGCAGAGATGAAGCCTGCCTGCTCGAATaGCTTGCGGGGGTTCTTTTT +
Preference number: 4 (lower is better)
Translates to: LVSQVPDPGCAIVAGRDEACLLE*LAGVLF
Trigger: AAAAAGAACCCCCGCAAGCCATTCGAGCAGGCAGGC...TTCATCTCTGCCAGCAACGATGGCACAGCCCGGATCTGGGACCTGGCTGACAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR TCA 90 bp GAGGCACCTCAGCATGGCCTCTGCAGTTGCTGGCTGGTAGCAGCAGCAGCAATACTTTGGATCCGAAATTaGCAGTCTCTGCTGCCAGCG +
Preference number: 4 (lower is better)
Translates to: EAPQHGLCSCWLVAAAAILWIRN*QSLLPA
Trigger: CGCTGGCAGCAGAGACTGTCAATTTCGGATCCAAAG...TATTGCTGCTGCTGCTACCAGCCAGCAACTGCAGAGGCCATGCTGAGGTGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356458.7
ENST00000673912.1
CDS-3UTR TCA 90 bp CTGCAGCGTTTTGAGCTTGTGCATCCGGGGCAGCATGGTAGGCATTTCCCAACGAGAATGGCCGGTGGCTaGCGCCAGAAGTTTTCCCTT +
Preference number: 4 (lower is better)
Translates to: LQRFELVHPGQHGRHFPTRMAGG*RQKFSL
Trigger: AAGGGAAAACTTCTGGCGTCAGCCACCGGCCATTCT...CGTTGGGAAATGCCTACCATGCTGCCCCGGATGCACAAGCTCAAAACGCTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp TTTCGTTCACTGACCAGAAGGACTAATAGGCGTCTATGTGCTCAGAACCACCAGTGCCCGGTCTCCAGCTaGAAGGCCCGGCAGCGCTTC +
Preference number: 4 (lower is better)
Translates to: FRSLTRRTNRRLCAQNHQCPVSS*KARQRF
Trigger: GAAGCGCTGCCGGGCCTTTCAGCTGGAGACCGGGCA...CTGGTGGTTCTGAGCACATAGACGCCTATTAGTCCTTCTGGTCAGTGAACGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp CTGCAGCGTTTTGAGCTTGTGCATCCGGGGCAGCATGGTAGGCATTTCCCAACGGAAATTGGTGGGAGGTaGGACAGCAGCCCACACAAC +
Preference number: 4 (lower is better)
Translates to: LQRFELVHPGQHGRHFPTEIGGR*DSSPHN
Trigger: GTTGTGTGGGCTGCTGTCTCACCTCCCACCAATTTC...CGTTGGGAAATGCCTACCATGCTGCCCCGGATGCACAAGCTCAAAACGCTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp GAGGCACCTCAGCATGGCCTCTGCAGTTGCTGGCTGGTAGCAGCAGCAGCAATACATGGAAAGTGTGACTaGGGGGCTTACGGATGGCTT +
Preference number: 4 (lower is better)
Translates to: EAPQHGLCSCWLVAAAAIHGKCD*GAYGWL
Trigger: AAGCCATCCGTAAGCCCCTCAGTCACACTTTCCATG...TATTGCTGCTGCTGCTACCAGCCAGCAACTGCAGAGGCCATGCTGAGGTGCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp ATCTCCCAGGACGCTTGTCCAGGAGGCCCAGGTGATCTTCTCAATGACCACGGCCATGGAAAGTGTGACTaGGGGGCTTACGGATGGCTT +
Preference number: 4 (lower is better)
Translates to: ISQDACPGGPGDLLNDHGHGKCD*GAYGWL
Trigger: AAGCCATCCGTAAGCCCCTCAGTCACACTTTCCATG...GCCGTGGTCATTGAGAAGATCACCTGGGCCTCCTGGACAAGCGTCCTGGGAGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR GCA 90 bp AAAAGGAAGCTTTGTCAATGCTTCCCGCACACTCTCCGTGACTTTACGAATGCGGCGAGCGAAATCCTCTaGCTGCCCTCCCCTCCCCGC +
Preference number: 4 (lower is better)
Translates to: KRKLCQCFPHTLRDFTNAASEIL*LPSPPR
Trigger: GCGGGGAGGGGAGGGCAGGCAGAGGATTTCGCTCGC...CGCATTCGTAAAGTCACGGAGAGTGTGCGGGAAGCATTGACAAAGCTTCCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR GCA 90 bp GAGCATCGTCTGCATTTTGGCAGCTCCCAGGGACCCGATGACCCCTTTCTTGTAAACCCGGGTGAGCTCTaGCATCGCCGTCTTTGGATC +
Preference number: 4 (lower is better)
Translates to: EHRLHFGSSQGPDDPFLVNPGEL*HRRLWI
Trigger: GATCCAAAGACGGCGATGGCAGAGCTCACCCGGGTT...TACAAGAAAGGGGTCATCGGGTCCCTGGGAGCTGCCAAAATGCAGACGATGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR GCA 90 bp GAGGCACCTCAGCATGGCCTCTGCAGTTGCTGGCTGGTAGCAGCAGCAGCAATAAGCCTCTGGGAGTGCTaGTGCCGATTATACACGACA +
Preference number: 4 (lower is better)
Translates to: EAPQHGLCSCWLVAAAAISLWEC*CRLYTT
Trigger: TGTCGTGTATAATCGGCAGCAGCACTCCCAGAGGCT...TATTGCTGCTGCTGCTACCAGCCAGCAACTGCAGAGGCCATGCTGAGGTGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp AATGAAGTCACCTCAACTCCACTCAGGGTGGTACACCAAGGTGCAGCCTTGGGTCAGGAGAGGGTGAGCTaGCAACCCCCACACTTCTCC +
Preference number: 4 (lower is better)
Translates to: NEVTSTPLRVVHQGAALGQERVS*QPPHFS
Trigger: GGAGAAGTGTGGGGGTTGGCAGCTCACCCTCTCCTG...ACCCAAGGCTGCACCTTGGTGTACCACCCTGAGTGGAGTTGAGGTGACTTCATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp CTGCAGCGTTTTGAGCTTGTGCATCCGGGGCAGCATGGTAGGCATTTCCCAACGACCTTGGCACCTTCCTaGCATCGCCAGACAGTGATG +
Preference number: 4 (lower is better)
Translates to: LQRFELVHPGQHGRHFPTTLAPS*HRQTVM
Trigger: CATCACTGTCTGGCGATGGCAGGAAGGTGCCAAGGT...CGTTGGGAAATGCCTACCATGCTGCCCCGGATGCACAAGCTCAAAACGCTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp CTGCAGCGTTTTGAGCTTGTGCATCCGGGGCAGCATGGTAGGCATTTCCCAACGAAGCAAGGCGCTGCCTaGCAGGGTCCAGAACTTCAT +
Preference number: 4 (lower is better)
Translates to: LQRFELVHPGQHGRHFPTKQGAA*QGPELH
Trigger: ATGAAGTTCTGGACCCTGGCAGGCAGCGCCTTGCTT...CGTTGGGAAATGCCTACCATGCTGCCCCGGATGCACAAGCTCAAAACGCTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp CTGCAGCGTTTTGAGCTTGTGCATCCGGGGCAGCATGGTAGGCATTTCCCAACGTGTAAAGCAAGGCGCTaGCTGCCAGGGTCCAGAACT +
Preference number: 4 (lower is better)
Translates to: LQRFELVHPGQHGRHFPTCKARR*LPGSRT
Trigger: AGTTCTGGACCCTGGCAGGCAGCGCCTTGCTTTACA...CGTTGGGAAATGCCTACCATGCTGCCCCGGATGCACAAGCTCAAAACGCTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp CTGCAGCGTTTTGAGCTTGTGCATCCGGGGCAGCATGGTAGGCATTTCCCAACGAGCTCACCCTCGCAGTaGCCCTGTAGGATCAACATC +
Preference number: 4 (lower is better)
Translates to: LQRFELVHPGQHGRHFPTSSPSQ*PCRINI
Trigger: GATGTTGATCCTACAGGGCCACTGCGAGGGTGAGCT...CGTTGGGAAATGCCTACCATGCTGCCCCGGATGCACAAGCTCAAAACGCTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp CTGCAGCGTTTTGAGCTTGTGCATCCGGGGCAGCATGGTAGGCATTTCCCAACGGGAAGCACCGCAGCATaGAGAGGGTGTGTTTGGTCA +
Preference number: 4 (lower is better)
Translates to: LQRFELVHPGQHGRHFPTGSTAA*RGCVWS
Trigger: TGACCAAACACACCCTCTCCATGCTGCGGTGCTTCC...CGTTGGGAAATGCCTACCATGCTGCCCCGGATGCACAAGCTCAAAACGCTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp ATATGCGCTCCAGGTGACCCCCTCGGCTGGCAACCTTGGCACCTTCCTGCCATCAGAGCAAGAGGACACTaGAACTATGGCATGGCTCAT +
Preference number: 4 (lower is better)
Translates to: ICAPGDPLGWQPWHLPAIRARGH*NYGMAH
Trigger: ATGAGCCATGCCATAGTTCCAGTGTCCTCTTGCTCT...GATGGCAGGAAGGTGCCAAGGTTGCCAGCCGAGGGGGTCACCTGGAGCGCATAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR TCA 90 bp TCTGGCTCCCTGTGGAGAGGTTCTGAACGATGCCAGCCGCTGCTGTGTGGAAGATCCAGACACCAGCACTaGGCTGTTGTAATTCGCATC +
Preference number: 4 (lower is better)
Translates to: SGSLWRGSERCQPLLCGRSRHQH*AVVIRI
Trigger: GATGCGAATTACAACAGCTCAGTGCTGGTGTCTGGA...TCTTCCACACAGCAGCGGCTGGCATCGTTCAGAACCTCTCCACAGGGAGCCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR TCA 90 bp GAGGCACCTCAGCATGGCCTCTGCAGTTGCTGGCTGGTAGCAGCAGCAGCAATAGCACACACTCCTCTCTaGTGTTGTCCTTTCAACAGC +
Preference number: 4 (lower is better)
Translates to: EAPQHGLCSCWLVAAAAIAHTPL*CCPFNS
Trigger: GCTGTTGAAAGGACAACATCAGAGAGGAGTGTGTGC...TATTGCTGCTGCTGCTACCAGCCAGCAACTGCAGAGGCCATGCTGAGGTGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp TGCTGCTCACCTTCCCATAAGCAGGTAACCGATGTCTTTCATTTAGGAAGCCTTTGCCCGGTCTCCAGCTaGAAGGCCCGGCAGCGCTTC +
Preference number: 4 (lower is better)
Translates to: CCSPSHKQVTDVFHLGSLCPVSS*KARQRF
Trigger: GAAGCGCTGCCGGGCCTTTCAGCTGGAGACCGGGCA...AAGGCTTCCTAAATGAAAGACATCGGTTACCTGCTTATGGGAAGGTGAGCAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp GAGGCACCTCAGCATGGCCTCTGCAGTTGCTGGCTGGTAGCAGCAGCAGCAATAGCACCTGTTGACACCTaGATGTATTTGCCATCCGCA +
Preference number: 4 (lower is better)
Translates to: EAPQHGLCSCWLVAAAAIAPVDT*MYLPSA
Trigger: TGCGGATGGCAAATACATTCAGGTGTCAACAGGTGC...TATTGCTGCTGCTGCTACCAGCCAGCAACTGCAGAGGCCATGCTGAGGTGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp GAGGCACCTCAGCATGGCCTCTGCAGTTGCTGGCTGGTAGCAGCAGCAGCAATATCACACATGCGCAGTTaGCATCAGCCTTGTCTGCAT +
Preference number: 4 (lower is better)
Translates to: EAPQHGLCSCWLVAAAAISHMRS*HQPCLH
Trigger: ATGCAGACAAGGCTGATGTCAACTGCGCATGTGTGA...TATTGCTGCTGCTGCTACCAGCCAGCAACTGCAGAGGCCATGCTGAGGTGCCTC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp GAGGCACCTCAGCATGGCCTCTGCAGTTGCTGGCTGGTAGCAGCAGCAGCAATAAGCCCTCCTCAGCTTTaGGGTTTTAGCACCATATGG +
Preference number: 4 (lower is better)
Translates to: EAPQHGLCSCWLVAAAAISPPQL*GFSTIW
Trigger: CCATATGGTGCTAAAACCTCAAAGCTGAGGAGGGCT...TATTGCTGCTGCTGCTACCAGCCAGCAACTGCAGAGGCCATGCTGAGGTGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp TCTGGCTCCCTGTGGAGAGGTTCTGAACGATGCCAGCCGCTGCTGTGTGGAAGATCATCGCCACCAAATTaGGCAAAATCGGGAGACTGG +
Preference number: 4 (lower is better)
Translates to: SGSLWRGSERCQPLLCGRSSPPN*AKSGDW
Trigger: CCAGTCTCCCGATTTTGCTCAATTTGGTGGCGATGA...TCTTCCACACAGCAGCGGCTGGCATCGTTCAGAACCTCTCCACAGGGAGCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR GCA 90 bp CAGTGTCAGCATTTACCACCAGGAAACTCCCATCGTTCAAGCCAACCGCTAAGGCAGGAGAGGGTGAGCTaGCAACCCCCACACTTCTCC +
Preference number: 4 (lower is better)
Translates to: QCQHLPPGNSHRSSQPLRQERVS*QPPHFS
Trigger: GGAGAAGTGTGGGGGTTGGCAGCTCACCCTCTCCTG...CCTTAGCGGTTGGCTTGAACGATGGGAGTTTCCTGGTGGTAAATGCTGACACTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000673655.1
ENST00000673746.1
ENST00000673916.1
ENST00000674035.1
CDS-3UTR GCA 90 bp GTGTCAGCATTTACCACCAGGAAACTCCCATCGTTCAAGCCAACCGCTAAGGCTCAGGAGAGGGTGAGCTaGCAACCCCCACACTTCTCC +
Preference number: 4 (lower is better)
Translates to: VSAFTTRKLPSFKPTAKAQERVS*QPPHFS
Trigger: GGAGAAGTGTGGGGGTTGGCAGCTCACCCTCTCCTG...AGCCTTAGCGGTTGGCTTGAACGATGGGAGTTTCCTGGTGGTAAATGCTGACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000673655.1
ENST00000673746.1
ENST00000673916.1
ENST00000674035.1
CDS-3UTR GCA 90 bp CTGCAGCGTTTTGAGCTTGTGCATCCGGGGCAGCATGGTAGGCATTTCCCAACGAACGATGCCAGCCGCTaGTGTGTGGAAGATGATGTC +
Preference number: 4 (lower is better)
Translates to: LQRFELVHPGQHGRHFPTNDASR*CVEDDV
Trigger: GACATCATCTTCCACACAGCAGCGGCTGGCATCGTT...CGTTGGGAAATGCCTACCATGCTGCCCCGGATGCACAAGCTCAAAACGCTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp AGATTGTTAGCACCGAAGGCCACGGAGAGCATCGTCTGCATTTTGGCAGCTCCCACGGAGAGCATCGTCTaGATTTTGGCAGCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: RLLAPKATESIVCILAAPTESIV*ILAAPR
Trigger: CCTGGGAGCTGCCAAAATGCAGACGATGCTCTCCGT...GGGAGCTGCCAAAATGCAGACGATGCTCTCCGTGGCCTTCGGTGCTAACAATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR GCA 90 bp AATGAAGTCACCTCAACTCCACTCAGGGTGGTACACCAAGGTGCAGCCTTGGGTACGGCTTCAGTTACCTaGTTCCCCAGGGGGACCTCA +
Preference number: 4 (lower is better)
Translates to: NEVTSTPLRVVHQGAALGTASVT*FPRGTS
Trigger: TGAGGTCCCCCTGGGGAAGCAGGTAACTGAAGCCGT...ACCCAAGGCTGCACCTTGGTGTACCACCCTGAGTGGAGTTGAGGTGACTTCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp AACTCCCATCGTTCAAGCCAACCGCTAAGGCTTTCCCATCAGGGGAAAAGGCACGTCCACCCTGCTCTGTaGCTGAAGCTGGTCTGCATG +
Preference number: 4 (lower is better)
Translates to: NSHRSSQPLRLSHQGKRHVHPAL*LKLVCM
Trigger: CATGCAGACCAGCTTCAGGCACAGAGCAGGGTGGAC...GTGCCTTTTCCCCTGATGGGAAAGCCTTAGCGGTTGGCTTGAACGATGGGAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673916.1
CDS-3UTR CCA 90 bp CTGCAGCGTTTTGAGCTTGTGCATCCGGGGCAGCATGGTAGGCATTTCCCAACGCCCAGGAAGAATTTTTaGCTGTGCTCGCGGGTGTTG +
Preference number: 4 (lower is better)
Translates to: LQRFELVHPGQHGRHFPTPRKNF*LCSRVL
Trigger: CAACACCCGCGAGCACAGCCAAAAATTCTTCCTGGG...CGTTGGGAAATGCCTACCATGCTGCCCCGGATGCACAAGCTCAAAACGCTGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp AATGAAGTCACCTCAACTCCACTCAGGGTGGTACACCAAGGTGCAGCCTTGGGTGCACACCTGGCCGCATaGCCCAAGCTCACCTTGTTT +
Preference number: 4 (lower is better)
Translates to: NEVTSTPLRVVHQGAALGAHLAA*PKLTLF
Trigger: AAACAAGGTGAGCTTGGGCCATGCGGCCAGGTGTGC...ACCCAAGGCTGCACCTTGGTGTACCACCCTGAGTGGAGTTGAGGTGACTTCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp GAGGCACCTCAGCATGGCCTCTGCAGTTGCTGGCTGGTAGCAGCAGCAGCAATAATACCCTGGCGTCTCTaGGCAAACTCTGCACTAAAG +
Preference number: 4 (lower is better)
Translates to: EAPQHGLCSCWLVAAAAIIPWRL*ANSALK
Trigger: CTTTAGTGCAGAGTTTGCCCAGAGACGCCAGGGTAT...TATTGCTGCTGCTGCTACCAGCCAGCAACTGCAGAGGCCATGCTGAGGTGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR CCA 90 bp CTTGTCAGCCAGGTCCCAGATCCGGGCTGTGCCATCGTTGCTGGCAGAGATGAAAGAAAGCTCATACCCTaGCGTCTCTGGGCAAACTCT +
Preference number: 4 (lower is better)
Translates to: LVSQVPDPGCAIVAGRDERKLIP*RLWANS
Trigger: AGAGTTTGCCCAGAGACGCCAGGGTATGAGCTTTCT...TTCATCTCTGCCAGCAACGATGGCACAGCCCGGATCTGGGACCTGGCTGACAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR TCA 90 bp ATCATAAGAGAAACGGATGTTCGTCACGTGAGCCGAGTGACCGAAGTATCGCTTACCCAGTTCGCTCACTaGAGTTTGCGGTGCGCCGGG +
Preference number: 4 (lower is better)
Translates to: IIRETDVRHVSRVTEVSLTQFAH*SLRCAG
Trigger: CCCGGCGCACCGCAAACTTCAGTGAGCGAACTGGGT...AAGCGATACTTCGGTCACTCGGCTCACGTGACGAACATCCGTTTCTCTTATGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR TCA 90 bp ATCATAAGAGAAACGGATGTTCGTCACGTGAGCCGAGTGACCGAAGTATCGCTTCGGGCGATCAAGGCATaGTCAGCCAGGCTCCACAGC +
Preference number: 4 (lower is better)
Translates to: IIRETDVRHVSRVTEVSLRAIKA*SARLHS
Trigger: GCTGTGGAGCCTGGCTGATCATGCCTTGATCGCCCG...AAGCGATACTTCGGTCACTCGGCTCACGTGACGAACATCCGTTTCTCTTATGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR TCA 90 bp AATGAAGTCACCTCAACTCCACTCAGGGTGGTACACCAAGGTGCAGCCTTGGGTCACTGGAAAACTGAGTaGTCAGCCCCTCCTGTGCTC +
Preference number: 4 (lower is better)
Translates to: NEVTSTPLRVVHQGAALGHWKTE*SAPPVL
Trigger: GAGCACAGGAGGGGCTGATCACTCAGTTTTCCAGTG...ACCCAAGGCTGCACCTTGGTGTACCACCCTGAGTGGAGTTGAGGTGACTTCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp AATGAAGTCACCTCAACTCCACTCAGGGTGGTACACCAAGGTGCAGCCTTGGGTGATGGATGGTCAGGCTaGGAATGTCGTCATCGTGCC +
Preference number: 4 (lower is better)
Translates to: NEVTSTPLRVVHQGAALGDGWSG*ECRHRA
Trigger: GGCACGATGACGACATTCTCAGCCTGACCATCCATC...ACCCAAGGCTGCACCTTGGTGTACCACCCTGAGTGGAGTTGAGGTGACTTCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp GAGGCACCTCAGCATGGCCTCTGCAGTTGCTGGCTGGTAGCAGCAGCAGCAATATGTGTGTCCCACACATaGATAGCAGCATCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: EAPQHGLCSCWLVAAAAICVSHT*IAASLP
Trigger: TGGAAGAGATGCTGCTATTCATGTGTGGGACACACA...TATTGCTGCTGCTGCTACCAGCCAGCAACTGCAGAGGCCATGCTGAGGTGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp CTGCAGCGTTTTGAGCTTGTGCATCCGGGGCAGCATGGTAGGCATTTCCCAACGCAAAGTCATCTCCTGTaGCAATGTTCAGGCCAGCGT +
Preference number: 4 (lower is better)
Translates to: LQRFELVHPGQHGRHFPTQSHLL*QCSGQR
Trigger: ACGCTGGCCTGAACATTGTCACAGGAGATGACTTTG...CGTTGGGAAATGCCTACCATGCTGCCCCGGATGCACAAGCTCAAAACGCTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp TTACCACCAGGAAACTCCCATCGTTCAAGCCAACCGCTAAGGCTTTCCCATCAGAGGTGGAGGGTGCAGTaGGCAGTGATCATGCCATGG +
Preference number: 4 (lower is better)
Translates to: LPPGNSHRSSQPLRLSHQRWRVQ*AVIMPW
Trigger: CCATGGCATGATCACTGCTCACTGCACCCTCCACCT...CTGATGGGAAAGCCTTAGCGGTTGGCTTGAACGATGGGAGTTTCCTGGTGGTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673655.1
ENST00000674035.1
CDS-3UTR TCA 90 bp GAGGCACCTCAGCATGGCCTCTGCAGTTGCTGGCTGGTAGCAGCAGCAGCAATAGCGGATTTTAAGTATTaGCCCTTCGCGGTTGTGGAT +
Preference number: 4 (lower is better)
Translates to: EAPQHGLCSCWLVAAAAIADFKY*PFAVVD
Trigger: ATCCACAACCGCGAAGGGTCAATACTTAAAATCCGC...TATTGCTGCTGCTGCTACCAGCCAGCAACTGCAGAGGCCATGCTGAGGTGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR GCA 90 bp GTACAAGATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACAGCGAGCGAAATCCTCTaGCTGCCCTCCCCTCCCCGC +
Preference number: 4 (lower is better)
Translates to: VQDRQTWLSLCITSHMVTASEIL*LPSPPR
Trigger: GCGGGGAGGGGAGGGCAGGCAGAGGATTTCGCTCGC...TGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATCTTGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356458.7
ENST00000673912.1
CDS-3UTR GCA 90 bp TTTCGTTCACTGACCAGAAGGACTAATAGGCGTCTATGTGCTCAGAACCACCAGAGAGGCTTCTTGGGGTaGAGGGCCAGAGCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: FRSLTRRTNRRLCAQNHQRGFLG*RARAQS
Trigger: GCTCTGGGCTCTGGCCCTGCACCCCAAGAAGCCTCT...CTGGTGGTTCTGAGCACATAGACGCCTATTAGTCCTTCTGGTCAGTGAACGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp TCTCCGTCTTTGGTTCCCACTAAGATTTTTCCTTTTCCACGGCACACGGAGCGCAAGAGCCGTCCTTCATaGCCAGGGCCAGCTGAGATC +
Preference number: 4 (lower is better)
Translates to: SPSLVPTKIFPFPRHTERKSRPS*PGPAEI
Trigger: GATCTCAGCTGGCCCTGGGCATGAAGGACGGCTCTT...GCGCTCCGTGTGCCGTGGAAAAGGAAAAATCTTAGTGGGAACCAAAGACGGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR GCA 90 bp GTTGATGTAATTCACCCCCTTGGAGTGGAAGCACCGCAGCATGGAGAGGGTGTGCTCTGGGAGTGCTGCTaGCGATTATACACGACAGCA +
Preference number: 4 (lower is better)
Translates to: VDVIHPLGVEAPQHGEGVLWECC*RLYTTA
Trigger: TGCTGTCGTGTATAATCGGCAGCAGCACTCCCAGAG...CACACCCTCTCCATGCTGCGGTGCTTCCACTCCAAGGGGGTGAATTACATCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR GCA 90 bp CTTGTCAGCCAGGTCCCAGATCCGGGCTGTGCCATCGTTGCTGGCAGAGATGAAAGTGAAGCCCCCACCTaGTTGTTGCCAGAATTTGAT +
Preference number: 4 (lower is better)
Translates to: LVSQVPDPGCAIVAGRDESEAPT*LLPEFD
Trigger: ATCAAATTCTGGCAACAAGCAGGTGGGGGCTTCACT...TTCATCTCTGCCAGCAACGATGGCACAGCCCGGATCTGGGACCTGGCTGACAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR GCA 90 bp AATGAAGTCACCTCAACTCCACTCAGGGTGGTACACCAAGGTGCAGCCTTGGGTCCCAGAGCTCCACGATaGCGTCCTTTCCACCTGTTA +
Preference number: 4 (lower is better)
Translates to: NEVTSTPLRVVHQGAALGPRAPR*RPFHLL
Trigger: TAACAGGTGGAAAGGACGGCATCGTGGAGCTCTGGG...ACCCAAGGCTGCACCTTGGTGTACCACCCTGAGTGGAGTTGAGGTGACTTCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp AACTCCCATCGTTCAAGCCAACCGCTAAGGCTTTCCCATCAGGGGAAAAGGCACACTGCCAGCATACGGTaGTGGGCAGATAGTTCCCAG +
Preference number: 4 (lower is better)
Translates to: NSHRSSQPLRLSHQGKRHTASIR*WADSSQ
Trigger: CTGGGAACTATCTGCCCAGCACCGTATGCTGGCAGT...GTGCCTTTTCCCCTGATGGGAAAGCCTTAGCGGTTGGCTTGAACGATGGGAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000673655.1
ENST00000673746.1
ENST00000673916.1
ENST00000674035.1
CDS-3UTR GCA 90 bp GAGCATCGTCTGCATTTTGGCAGCTCCCAGGGACCCGATGACCCCTTTCTTGTAGAAACTTCCTTCAGCTaGTGGTGTGGCTTGGTGCCT +
Preference number: 4 (lower is better)
Translates to: EHRLHFGSSQGPDDPFLVETSFS*WCGLVP
Trigger: AGGCACCAAGCCACACCAGCAGCTGAAGGAAGTTTC...TACAAGAAAGGGGTCATCGGGTCCCTGGGAGCTGCCAAAATGCAGACGATGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR GCA 90 bp TTTCGTTCACTGACCAGAAGGACTAATAGGCGTCTATGTGCTCAGAACCACCAGATCAGGGCTGTAGGCTaGACACCTGGCCGCATGGCC +
Preference number: 4 (lower is better)
Translates to: FRSLTRRTNRRLCAQNHQIRAVG*TPGRMA
Trigger: GGCCATGCGGCCAGGTGTGCAGCCTACAGCCCTGAT...CTGGTGGTTCTGAGCACATAGACGCCTATTAGTCCTTCTGGTCAGTGAACGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp GTTGATGTAATTCACCCCCTTGGAGTGGAAGCACCGCAGCATGGAGAGGGTGTGAGCGTTTTGAGCTTGTaGATCCGGGGCAGCATGGTA +
Preference number: 4 (lower is better)
Translates to: VDVIHPLGVEAPQHGEGVSVLSL*IRGSMV
Trigger: TACCATGCTGCCCCGGATGCACAAGCTCAAAACGCT...CACACCCTCTCCATGCTGCGGTGCTTCCACTCCAAGGGGGTGAATTACATCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR GCA 90 bp AAAAGGAAGCTTTGTCAATGCTTCCCGCACACTCTCCGTGACTTTACGAATGCGGTAGGTCAGCCTGCCTaGTCGAATGGCTTGCGGGGG +
Preference number: 4 (lower is better)
Translates to: KRKLCQCFPHTLRDFTNAVGQPA*SNGLRG
Trigger: CCCCCGCAAGCCATTCGAGCAGGCAGGCTGACCTAC...CGCATTCGTAAAGTCACGGAGAGTGTGCGGGAAGCATTGACAAAGCTTCCTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR CCA 90 bp ATCACGGTTTTGGAGAGTCCAGATTATGGGAGCAGTTGTGTAACTTCTGCAGCGCGAGATCTCGCCGCTTaGAAACAGCGACGCCCCGGA +
Preference number: 4 (lower is better)
Translates to: ITVLESPDYGSSCVTSAARDLAA*KQRRPG
Trigger: TCCGGGGCGTCGCTGTTTCCAAGCGGCGAGATCTCG...CGCTGCAGAAGTTACACAACTGCTCCCATAATCTGGACTCTCCAAAACCGTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356458.7
ENST00000673912.1
CDS-3UTR CCA 90 bp TACAAGATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACAGTCCCGCACCCGGGGATaGACTTCGTCACTGGGGCGC +
Preference number: 4 (lower is better)
Translates to: YKIGRHGYHSASPVTWLQSRTRG*TSSLGR
Trigger: GCGCCCCAGTGACGAAGTCCATCCCCGGGTGCGGGA...CTGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATCTTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356458.7
ENST00000673912.1
CDS-3UTR CCA 90 bp AGCAGCCCACACAACTGGAAACTTTCAAAGGCACTTAATGGATATAAAACTCTGCGTCCTCGCCGAGGCTaGGGCTGCGGCGGACCTGCA +
Preference number: 4 (lower is better)
Translates to: SSPHNWKLSKALNGYKTLRPRRG*GCGGPA
Trigger: TGCAGGTCCGCCGCAGCCCCAGCCTCGGCGAGGACG...CAGAGTTTTATATCCATTAAGTGCCTTTGAAAGTTTCCAGTTGTGTGGGCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356458.7
ENST00000673912.1
CDS-3UTR CCA 90 bp AATGAAGTCACCTCAACTCCACTCAGGGTGGTACACCAAGGTGCAGCCTTGGGTAGCTCACCCTCGCAGTaGCCCTGTAGGATCAACATC +
Preference number: 4 (lower is better)
Translates to: NEVTSTPLRVVHQGAALGSSPSQ*PCRINI
Trigger: GATGTTGATCCTACAGGGCCACTGCGAGGGTGAGCT...ACCCAAGGCTGCACCTTGGTGTACCACCCTGAGTGGAGTTGAGGTGACTTCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp TCTCCGTCTTTGGTTCCCACTAAGATTTTTCCTTTTCCACGGCACACGGAGCGCCCCAGGTACAGCCTCTaGGAGTGCTGCTGCCGATTA +
Preference number: 4 (lower is better)
Translates to: SPSLVPTKIFPFPRHTERPRYSL*ECCCRL
Trigger: TAATCGGCAGCAGCACTCCCAGAGGCTGTACCTGGG...GCGCTCCGTGTGCCGTGGAAAAGGAAAAATCTTAGTGGGAACCAAAGACGGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR CCA 90 bp GAGCATCGTCTGCATTTTGGCAGCTCCCAGGGACCCGATGACCCCTTTCTTGTACTGTACTTGGGGTGCTaGTTCACTGTGAGACAGAGG +
Preference number: 4 (lower is better)
Translates to: EHRLHFGSSQGPDDPFLVLYLGC*FTVRQR
Trigger: CCTCTGTCTCACAGTGAACCAGCACCCCAAGTACAG...TACAAGAAAGGGGTCATCGGGTCCCTGGGAGCTGCCAAAATGCAGACGATGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR CCA 90 bp TTTCGTTCACTGACCAGAAGGACTAATAGGCGTCTATGTGCTCAGAACCACCAGGGTGACCCCCTCGGCTaGCAACCTTGGCACCTTCCT +
Preference number: 4 (lower is better)
Translates to: FRSLTRRTNRRLCAQNHQGDPLG*QPWHLP
Trigger: AGGAAGGTGCCAAGGTTGCCAGCCGAGGGGGTCACC...CTGGTGGTTCTGAGCACATAGACGCCTATTAGTCCTTCTGGTCAGTGAACGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp AAAAGGAAGCTTTGTCAATGCTTCCCGCACACTCTCCGTGACTTTACGAATGCGGGTGACCCCCTCGGCTaGCAACCTTGGCACCTTCCT +
Preference number: 4 (lower is better)
Translates to: KRKLCQCFPHTLRDFTNAGDPLG*QPWHLP
Trigger: AGGAAGGTGCCAAGGTTGCCAGCCGAGGGGGTCACC...CGCATTCGTAAAGTCACGGAGAGTGTGCGGGAAGCATTGACAAAGCTTCCTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR CAA 72 bp TTGGAGTGGAAGCACCGCAGCATGGAGAGGGTGTGTTaGGTCATGGCGTCCCATATGTGGATGGAAGGTGTT +
Preference number: 4 (lower is better)
Translates to: LEWKHRSMERVC*VMASHMWMEGV
Trigger: AACACCTTCCATCCACATATGGGACGCCATGACCAAACACACCCTCTCCATGCTGCGGTGCTTCCACTCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR TCA 90 bp AAAAGGAAGCTTTGTCAATGCTTCCCGCACACTCTCCGTGACTTTACGAATGCGGAGATCCGTCGGGGCTaGAAGCTACACTGCGAACCG +
Preference number: 4 (lower is better)
Translates to: KRKLCQCFPHTLRDFTNAEIRRG*KLHCEP
Trigger: CGGTTCGCAGTGTAGCTTTCAGCCCCGACGGATCTC...CGCATTCGTAAAGTCACGGAGAGTGTGCGGGAAGCATTGACAAAGCTTCCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR TCA 90 bp ATCTCCCAGGACGCTTGTCCAGGAGGCCCAGGTGATCTTCTCAATGACCACGGCGTAATTCGCATCCACTaGGTTGATGTCAGTAACCTC +
Preference number: 4 (lower is better)
Translates to: ISQDACPGGPGDLLNDHGVIRIH*VDVSNL
Trigger: GAGGTTACTGACATCAACTCAGTGGATGCGAATTAC...GCCGTGGTCATTGAGAAGATCACCTGGGCCTCCTGGACAAGCGTCCTGGGAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR TCA 90 bp TCTCCGTCTTTGGTTCCCACTAAGATTTTTCCTTTTCCACGGCACACGGAGCGCCCTTCCATGTGCCCCTaGACAAGCAGTGTCATTGGG +
Preference number: 4 (lower is better)
Translates to: SPSLVPTKIFPFPRHTERPSMCP*TSSVIG
Trigger: CCCAATGACACTGCTTGTTCAGGGGCACATGGAAGG...GCGCTCCGTGTGCCGTGGAAAAGGAAAAATCTTAGTGGGAACCAAAGACGGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR TCA 90 bp AATTTTCGTTCACTGACCAGAAGGACTAATAGGCGTCTATGTGCTCAGAACCACCGGCGCCGCCCACCGTaGGCAGCACAGAGTCATTGT +
Preference number: 4 (lower is better)
Translates to: NFRSLTRRTNRRLCAQNHRRRPP*AAQSHC
Trigger: ACAATGACTCTGTGCTGCTCACGGTGGGCGGCGCCG...GTGGTTCTGAGCACATAGACGCCTATTAGTCCTTCTGGTCAGTGAACGAAAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp ATCATAAGAGAAACGGATGTTCGTCACGTGAGCCGAGTGACCGAAGTATCGCTTTTCCACGTCGGTGTCTaGCTCCTCGCTGTCCACCAG +
Preference number: 4 (lower is better)
Translates to: IIRETDVRHVSRVTEVSLFHVGV*LLAVHQ
Trigger: CTGGTGGACAGCGAGGAGTCAGACACCGACGTGGAA...AAGCGATACTTCGGTCACTCGGCTCACGTGACGAACATCCGTTTCTCTTATGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR TCA 90 bp ATCACGGTTTTGGAGAGTCCAGATTATGGGAGCAGTTGTGTAACTTCTGCAGCGGCCATCGCCAGACAGTaGTGGTGTGCTCAGGGTCCA +
Preference number: 4 (lower is better)
Translates to: ITVLESPDYGSSCVTSAAAIARQ*WCAQGP
Trigger: TGGACCCTGAGCACACCATCACTGTCTGGCGATGGC...CGCTGCAGAAGTTACACAACTGCTCCCATAATCTGGACTCTCCAAAACCGTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp AGATTGTTAGCACCGAAGGCCACGGAGAGCATCGTCTGCATTTTGGCAGCTCCCCGTCTCCTCCAGTGCTaGCCACATACTTGTCATCAT +
Preference number: 4 (lower is better)
Translates to: RLLAPKATESIVCILAAPRLLQC*PHTCHH
Trigger: ATGATGACAAGTATGTGGTCAGCACTGGAGGAGACG...GGGAGCTGCCAAAATGCAGACGATGCTCTCCGTGGCCTTCGGTGCTAACAATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR TCA 90 bp AATGAAGTCACCTCAACTCCACTCAGGGTGGTACACCAAGGTGCAGCCTTGGGTGCTACATGGAAAGTGTaGCTGAGGGGCTTACGGATG +
Preference number: 4 (lower is better)
Translates to: NEVTSTPLRVVHQGAALGATWKV*LRGLRM
Trigger: CATCCGTAAGCCCCTCAGTCACACTTTCCATGTAGC...ACCCAAGGCTGCACCTTGGTGTACCACCCTGAGTGGAGTTGAGGTGACTTCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp ACCAGGAAACTCCCATCGTTCAAGCCAACCGCTAAGGCTTTCCCATCAGGGGAAGCACTCCAGACTGGATaGCAGAGGGAGACCCTTTTT +
Preference number: 4 (lower is better)
Translates to: TRKLPSFKPTAKAFPSGEALQTG*QRETLF
Trigger: AAAAAGGGTCTCCCTCTGTCATCCAGTCTGGAGTGC...TTCCCCTGATGGGAAAGCCTTAGCGGTTGGCTTGAACGATGGGAGTTTCCTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674035.1
CDS-3UTR TCA 90 bp TTCAACAGTGTCAGCATTTACCACCAGGAAACTCCCATCGTTCAAGCCAACCGCAGGTGGAGGGTGCAGTaGGCAGTGATCATGCCATGG +
Preference number: 4 (lower is better)
Translates to: FNSVSIYHQETPIVQANRRWRVQ*AVIMPW
Trigger: CCATGGCATGATCACTGCTCACTGCACCCTCCACCT...GCGGTTGGCTTGAACGATGGGAGTTTCCTGGTGGTAAATGCTGACACTGTTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673655.1
ENST00000674035.1
CDS-3UTR TCA 90 bp AGGAAACTCCCATCGTTCAAGCCAACCGCTAAGGCTTTCCCATCAGGGGAAAAGGGTGGAAGGATCACTTaGGCTTTGGAGGTGGAGGGT +
Preference number: 4 (lower is better)
Translates to: RKLPSFKPTAKAFPSGEKGGRIT*ALEVEG
Trigger: ACCCTCCACCTCCAAAGCTCAAGTGATCCTTCCACC...CTTTTCCCCTGATGGGAAAGCCTTAGCGGTTGGCTTGAACGATGGGAGTTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000673655.1
ENST00000674035.1
CDS-3UTR TCA 90 bp CTTCAACAGTGTCAGCATTTACCACCAGGAAACTCCCATCGTTCAAGCCAACCGCCTCTGGTTTCAGGTTaGCTTTGGCCAACGGGGAGC +
Preference number: 4 (lower is better)
Translates to: LQQCQHLPPGNSHRSSQPPLVSG*LWPTGS
Trigger: GCTCCCCGTTGGCCAAAGTCAACCTGAAACCAGAGG...CGGTTGGCTTGAACGATGGGAGTTTCCTGGTGGTAAATGCTGACACTGTTGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673916.1
CDS-3UTR TCA 90 bp CATTTACCACCAGGAAACTCCCATCGTTCAAGCCAACCGCTAAGGCTTTCCCATACCCTGCTCTGTGCCTaGAGCTGGTCTGCATGGAGA +
Preference number: 4 (lower is better)
Translates to: HLPPGNSHRSSQPLRLSHTLLCA*SWSAWR
Trigger: TCTCCATGCAGACCAGCTTCAGGCACAGAGCAGGGT...ATGGGAAAGCCTTAGCGGTTGGCTTGAACGATGGGAGTTTCCTGGTGGTAAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673916.1
CDS-3UTR GCA 90 bp TGCTGCTCACCTTCCCATAAGCAGGTAACCGATGTCTTTCATTTAGGAAGCCTTATTGACAGTCTCTGCTaGCAGCGGACGCCACCGGCG +
Preference number: 4 (lower is better)
Translates to: CCSPSHKQVTDVFHLGSLIDSLC*QRTPPA
Trigger: CGCCGGTGGCGTCCGCTGGCAGCAGAGACTGTCAAT...AAGGCTTCCTAAATGAAAGACATCGGTTACCTGCTTATGGGAAGGTGAGCAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356458.7
ENST00000673912.1
CDS-3UTR GCA 90 bp CTGCAGCGTTTTGAGCTTGTGCATCCGGGGCAGCATGGTAGGCATTTCCCAACGAGTGAAGCCCCCACCTaGTTGTTGCCAGAATTTGAT +
Preference number: 4 (lower is better)
Translates to: LQRFELVHPGQHGRHFPTSEAPT*LLPEFD
Trigger: ATCAAATTCTGGCAACAAGCAGGTGGGGGCTTCACT...CGTTGGGAAATGCCTACCATGCTGCCCCGGATGCACAAGCTCAAAACGCTGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp CACATACTTGTCATCATAAGAGAAACGGATGTTCGTCACGTGAGCCGAGTGACCCAGGAGAGGGTGAGCTaGCAACCCCCACACTTCTCC +
Preference number: 4 (lower is better)
Translates to: HILVIIRETDVRHVSRVTQERVS*QPPHFS
Trigger: GGAGAAGTGTGGGGGTTGGCAGCTCACCCTCTCCTG...GGTCACTCGGCTCACGTGACGAACATCCGTTTCTCTTATGATGACAAGTATGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR GCA 90 bp GGAAACTCCCATCGTTCAAGCCAACCGCTAAGGCTTTCCCATCAGGGGAAAAGGATCATCGCTCACTGTTaGACAGATGGGCAGGAGAGG +
Preference number: 4 (lower is better)
Translates to: GNSHRSSQPLRLSHQGKRIIAHC*TDGQER
Trigger: CCTCTCCTGCCCATCTGTGCAACAGTGAGCGATGAT...CCTTTTCCCCTGATGGGAAAGCCTTAGCGGTTGGCTTGAACGATGGGAGTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000673655.1
ENST00000673746.1
ENST00000673916.1
ENST00000674035.1
CDS-3UTR GCA 90 bp TCTCCGTCTTTGGTTCCCACTAAGATTTTTCCTTTTCCACGGCACACGGAGCGCACTGCCAGCATACGGTaGTGGGCAGATAGTTCCCAG +
Preference number: 4 (lower is better)
Translates to: SPSLVPTKIFPFPRHTERTASIR*WADSSQ
Trigger: CTGGGAACTATCTGCCCAGCACCGTATGCTGGCAGT...GCGCTCCGTGTGCCGTGGAAAAGGAAAAATCTTAGTGGGAACCAAAGACGGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR GCA 90 bp GGAAACTCCCATCGTTCAAGCCAACCGCTAAGGCTTTCCCATCAGGGGAAAAGGTTTGAGTTTCCGTACTaGCAGCATACGGTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: GNSHRSSQPLRLSHQGKRFEFPY*QHTVLG
Trigger: GCCCAGCACCGTATGCTGGCAGTACGGAAACTCAAA...CCTTTTCCCCTGATGGGAAAGCCTTAGCGGTTGGCTTGAACGATGGGAGTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000673655.1
ENST00000673746.1
ENST00000673916.1
ENST00000674035.1
CDS-3UTR GCA 90 bp CTGCAGCGTTTTGAGCTTGTGCATCCGGGGCAGCATGGTAGGCATTTCCCAACGTTTCTGTACTTGGGGTaGTGGTTCACTGTGAGACAG +
Preference number: 4 (lower is better)
Translates to: LQRFELVHPGQHGRHFPTFLYLG*WFTVRQ
Trigger: CTGTCTCACAGTGAACCAGCACCCCAAGTACAGAAA...CGTTGGGAAATGCCTACCATGCTGCCCCGGATGCACAAGCTCAAAACGCTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp TGCTGCTCACCTTCCCATAAGCAGGTAACCGATGTCTTTCATTTAGGAAGCCTTATCAGGGCTGTAGGCTaGACACCTGGCCGCATGGCC +
Preference number: 4 (lower is better)
Translates to: CCSPSHKQVTDVFHLGSLIRAVG*TPGRMA
Trigger: GGCCATGCGGCCAGGTGTGCAGCCTACAGCCCTGAT...AAGGCTTCCTAAATGAAAGACATCGGTTACCTGCTTATGGGAAGGTGAGCAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp GAGGCACCTCAGCATGGCCTCTGCAGTTGCTGGCTGGTAGCAGCAGCAGCAATAAGCTTGGGATATCTTTaGAGTAGCCAATGCGGTTCA +
Preference number: 4 (lower is better)
Translates to: EAPQHGLCSCWLVAAAAISLGYL*SSQCGS
Trigger: TGAACCGCATTGGCTACTGCAAAGATATCCCAAGCT...TATTGCTGCTGCTGCTACCAGCCAGCAACTGCAGAGGCCATGCTGAGGTGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp TCTCCGTCTTTGGTTCCCACTAAGATTTTTCCTTTTCCACGGCACACGGAGCGCGGTGGTACACCAAGGTaGAGCCTTGGGTTACCCTCA +
Preference number: 4 (lower is better)
Translates to: SPSLVPTKIFPFPRHTERGGTPR*SLGLPS
Trigger: TGAGGGTAACCCAAGGCTGCACCTTGGTGTACCACC...GCGCTCCGTGTGCCGTGGAAAAGGAAAAATCTTAGTGGGAACCAAAGACGGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR CCA 90 bp GATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACAGAAAACGATGGACTTCGTCACTaGGGCGCCGCGGGAGACAGG +
Preference number: 4 (lower is better)
Translates to: DRQTWLSLCITSHMVTENDGLRH*GAAGDR
Trigger: CCTGTCTCCCGCGGCGCCCCAGTGACGAAGTCCATC...GTTTTCTGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356458.7
ENST00000673912.1
CDS-3UTR CCA 90 bp AATGAAGTCACCTCAACTCCACTCAGGGTGGTACACCAAGGTGCAGCCTTGGGTCCCAGGAAGAATTTTTaGCTGTGCTCGCGGGTGTTG +
Preference number: 4 (lower is better)
Translates to: NEVTSTPLRVVHQGAALGPRKNF*LCSRVL
Trigger: CAACACCCGCGAGCACAGCCAAAAATTCTTCCTGGG...ACCCAAGGCTGCACCTTGGTGTACCACCCTGAGTGGAGTTGAGGTGACTTCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp AGTGGCCAGGCCCCAGATCTCCCCTTCCATGTGACCATCAATCAGGATGTTAGACCCAGGAAGAATTTTTaGCTGTGCTCGCGGGTGTTG +
Preference number: 4 (lower is better)
Translates to: SGQAPDLPFHVTINQDVRPRKNF*LCSRVL
Trigger: CAACACCCGCGAGCACAGCCAAAAATTCTTCCTGGG...TCTAACATCCTGATTGATGGTCACATGGAAGGGGAGATCTGGGGCCTGGCCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR CCA 90 bp AATGAAGTCACCTCAACTCCACTCAGGGTGGTACACCAAGGTGCAGCCTTGGGTTGTCAGAATGGCCGGTaGCTGACGCCAGAAGTTTTC +
Preference number: 4 (lower is better)
Translates to: NEVTSTPLRVVHQGAALGCQNGR*LTPEVF
Trigger: GAAAACTTCTGGCGTCAGCCACCGGCCATTCTGACA...ACCCAAGGCTGCACCTTGGTGTACCACCCTGAGTGGAGTTGAGGTGACTTCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp CTTGTCAGCCAGGTCCCAGATCCGGGCTGTGCCATCGTTGCTGGCAGAGATGAAATGCAAGGCAAAGGATaGTCTGAAGATCCCCTGTTT +
Preference number: 4 (lower is better)
Translates to: LVSQVPDPGCAIVAGRDEMQGKG*SEDPLF
Trigger: AAACAGGGGATCTTCAGACCATCCTTTGCCTTGCAT...TTCATCTCTGCCAGCAACGATGGCACAGCCCGGATCTGGGACCTGGCTGACAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR CCA 90 bp ATCTCCCAGGACGCTTGTCCAGGAGGCCCAGGTGATCTTCTCAATGACCACGGCGTTGCTGACACCTTCTaGAATAAACCTCCACTGGAA +
Preference number: 4 (lower is better)
Translates to: ISQDACPGGPGDLLNDHGVADTF*NKPPLE
Trigger: TTCCAGTGGAGGTTTATTCCAGAAGGTGTCAGCAAC...GCCGTGGTCATTGAGAAGATCACCTGGGCCTCCTGGACAAGCGTCCTGGGAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR CCA 90 bp GCATTTACCACCAGGAAACTCCCATCGTTCAAGCCAACCGCTAAGGCTTTCCCAGCCAGCATACGGTGCTaGGCAGATAGTTCCCAGATG +
Preference number: 4 (lower is better)
Translates to: AFTTRKLPSFKPTAKAFPASIRC*ADSSQM
Trigger: CATCTGGGAACTATCTGCCCAGCACCGTATGCTGGC...TGGGAAAGCCTTAGCGGTTGGCTTGAACGATGGGAGTTTCCTGGTGGTAAATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000673655.1
ENST00000673746.1
ENST00000673916.1
ENST00000674035.1
CDS-3UTR CCA 90 bp CAGCATTTACCACCAGGAAACTCCCATCGTTCAAGCCAACCGCTAAGGCTTTCCGCCAGCATACGGTGCTaGGCAGATAGTTCCCAGATG +
Preference number: 4 (lower is better)
Translates to: QHLPPGNSHRSSQPLRLSASIRC*ADSSQM
Trigger: CATCTGGGAACTATCTGCCCAGCACCGTATGCTGGC...GGAAAGCCTTAGCGGTTGGCTTGAACGATGGGAGTTTCCTGGTGGTAAATGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000673655.1
ENST00000673746.1
ENST00000673916.1
ENST00000674035.1
CDS-3UTR CCA 90 bp AATGAAGTCACCTCAACTCCACTCAGGGTGGTACACCAAGGTGCAGCCTTGGGTCTTCAGCTGCTGGTGTaGCTTGGTGCCTTCCATTTC +
Preference number: 4 (lower is better)
Translates to: NEVTSTPLRVVHQGAALGLQLLV*LGAFHF
Trigger: GAAATGGAAGGCACCAAGCCACACCAGCAGCTGAAG...ACCCAAGGCTGCACCTTGGTGTACCACCCTGAGTGGAGTTGAGGTGACTTCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp AATGAAGTCACCTCAACTCCACTCAGGGTGGTACACCAAGGTGCAGCCTTGGGTTCCCTATCTGGCTGGTaGCCACCACGTTTCTGTACT +
Preference number: 4 (lower is better)
Translates to: NEVTSTPLRVVHQGAALGSLSGW*PPRFCT
Trigger: AGTACAGAAACGTGGTGGCCACCAGCCAGATAGGGA...ACCCAAGGCTGCACCTTGGTGTACCACCCTGAGTGGAGTTGAGGTGACTTCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp AATGAAGTCACCTCAACTCCACTCAGGGTGGTACACCAAGGTGCAGCCTTGGGTTTGTCCCTATCTGGCTaGTGGCCACCACGTTTCTGT +
Preference number: 4 (lower is better)
Translates to: NEVTSTPLRVVHQGAALGLSLSG*WPPRFC
Trigger: ACAGAAACGTGGTGGCCACCAGCCAGATAGGGACAA...ACCCAAGGCTGCACCTTGGTGTACCACCCTGAGTGGAGTTGAGGTGACTTCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp CTTGTCAGCCAGGTCCCAGATCCGGGCTGTGCCATCGTTGCTGGCAGAGATGAAACCAAGGTGCAGCCTTaGGTTACCCTCATTTATCTT +
Preference number: 4 (lower is better)
Translates to: LVSQVPDPGCAIVAGRDETKVQP*VTLIYL
Trigger: AAGATAAATGAGGGTAACCCAAGGCTGCACCTTGGT...TTCATCTCTGCCAGCAACGATGGCACAGCCCGGATCTGGGACCTGGCTGACAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR CCA 90 bp AACTCCCATCGTTCAAGCCAACCGCTAAGGCTTTCCCATCAGGGGAAAAGGCACGCAGTGATCATGCCATaGCACTCCAGACTGGATGAC +
Preference number: 4 (lower is better)
Translates to: NSHRSSQPLRLSHQGKRHAVIMP*HSRLDD
Trigger: GTCATCCAGTCTGGAGTGCCATGGCATGATCACTGC...GTGCCTTTTCCCCTGATGGGAAAGCCTTAGCGGTTGGCTTGAACGATGGGAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000673655.1
ENST00000674035.1
CDS-3UTR CCA 90 bp CGAATGCGCCCGGGGACTCTGCTTAGAGTGTGCTGGGGAGAAACTTGCTGTCAGTCTTCCTGGATGTCGTaGGGAGTTATGTACAATGGA +
Preference number: 4 (lower is better)
Translates to: RMRPGTLLRVCWGETCCQSSWMS*GVMYNG
Trigger: TCCATTGTACATAACTCCCCACGACATCCAGGAAGA...CTGACAGCAAGTTTCTCCCCAGCACACTCTAAGCAGAGTCCCCGGGCGCATTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR CCA 90 bp AACTCCCATCGTTCAAGCCAACCGCTAAGGCTTTCCCATCAGGGGAAAAGGCACGGCTCCCTTGTCCTCTaGTTTCAGGTTGACTTTGGC +
Preference number: 4 (lower is better)
Translates to: NSHRSSQPLRLSHQGKRHGSLVL*FQVDFG
Trigger: GCCAAAGTCAACCTGAAACCAGAGGACAAGGGAGCC...GTGCCTTTTCCCCTGATGGGAAAGCCTTAGCGGTTGGCTTGAACGATGGGAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673916.1
3UTR CAA 72 bp TGGGAGCAGTTGTGTAACTTCTGCAGCGTTTTGAGCTaGTGCATCCGGGGCAGCATGGTAGGCATTTCCCAA +
Preference number: 4 (lower is better)
Translates to: WEQLCNFCSVLS*CIRGSMVGISQ
Trigger: TTGGGAAATGCCTACCATGCTGCCCCGGATGCACAAGCTCAAAACGCTGCAGAAGTTACACAACTGCTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp TACAAGATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACAGATGCCCAGGGCCAGCTaGGATCCGTCGGGGCTGAAA +
Preference number: 4 (lower is better)
Translates to: YKIGRHGYHSASPVTWLQMPRAS*DPSGLK
Trigger: TTTCAGCCCCGACGGATCTCAGCTGGCCCTGGGCAT...CTGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATCTTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp GATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACAGAAAACATGCCCAGGGCCAGCTaGGATCCGTCGGGGCTGAAA +
Preference number: 4 (lower is better)
Translates to: DRQTWLSLCITSHMVTENMPRAS*DPSGLK
Trigger: TTTCAGCCCCGACGGATCTCAGCTGGCCCTGGGCAT...GTTTTCTGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp TTTCGTTCACTGACCAGAAGGACTAATAGGCGTCTATGTGCTCAGAACCACCAGGTGCTCAACACCCACTaGAAGTCATGGGACCAGCGG +
Preference number: 4 (lower is better)
Translates to: FRSLTRRTNRRLCAQNHQVLNTH*KSWDQR
Trigger: CCGCTGGTCCCATGACTTTCAGTGGGTGTTGAGCAC...CTGGTGGTTCTGAGCACATAGACGCCTATTAGTCCTTCTGGTCAGTGAACGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp GTACAAGATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACAAATATGCGCTCCAGGTaGCCCCCTCGGCTGGCAACC +
Preference number: 4 (lower is better)
Translates to: VQDRQTWLSLCITSHMVTNMRSR*PPRLAT
Trigger: GGTTGCCAGCCGAGGGGGTCACCTGGAGCGCATATT...TGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATCTTGTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp TTTCGTTCACTGACCAGAAGGACTAATAGGCGTCTATGTGCTCAGAACCACCAGTTCCGCCGGTCACTATaGGTCCATCCCGAAGGGTTG +
Preference number: 4 (lower is better)
Translates to: FRSLTRRTNRRLCAQNHQFRRSL*VHPEGL
Trigger: CAACCCTTCGGGATGGACTCATAGTGACCGGCGGAA...CTGGTGGTTCTGAGCACATAGACGCCTATTAGTCCTTCTGGTCAGTGAACGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp TTGTGTGCAGGGGAAGACAGGGTACCTTTATTTTCTCAGAAACTCTTCAATCAATGCCCGGTCTCCAGCTaGAAGGCCCGGCAGCGCTTC +
Preference number: 4 (lower is better)
Translates to: LCAGEDRVPLFSQKLFNQCPVSS*KARQRF
Trigger: GAAGCGCTGCCGGGCCTTTCAGCTGGAGACCGGGCA...TTGATTGAAGAGTTTCTGAGAAAATAAAGGTACCCTGTCTTCCCCTGCACACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR TCA 90 bp GTTGATGTAATTCACCCCCTTGGAGTGGAAGCACCGCAGCATGGAGAGGGTGTGTCTCATAGACCTTCCTaGGCCTTTTTCCCCTTCCAT +
Preference number: 4 (lower is better)
Translates to: VDVIHPLGVEAPQHGEGVSHRPS*AFFPFH
Trigger: ATGGAAGGGGAAAAAGGCTCAGGAAGGTCTATGAGA...CACACCCTCTCCATGCTGCGGTGCTTCCACTCCAAGGGGGTGAATTACATCAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR TCA 90 bp TTTACCACCAGGAAACTCCCATCGTTCAAGCCAACCGCTAAGGCTTTCCCATCAGGTGGAAGGATCACTTaGGCTTTGGAGGTGGAGGGT +
Preference number: 4 (lower is better)
Translates to: FTTRKLPSFKPTAKAFPSGGRIT*ALEVEG
Trigger: ACCCTCCACCTCCAAAGCTCAAGTGATCCTTCCACC...TGATGGGAAAGCCTTAGCGGTTGGCTTGAACGATGGGAGTTTCCTGGTGGTAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673655.1
ENST00000674035.1
CDS-3UTR GCA 90 bp TTTCGTTCACTGACCAGAAGGACTAATAGGCGTCTATGTGCTCAGAACCACCAGGAAATTGACAGTCTCTaGTGCCAGCGGACGCCACCG +
Preference number: 4 (lower is better)
Translates to: FRSLTRRTNRRLCAQNHQEIDSL*CQRTPP
Trigger: CGGTGGCGTCCGCTGGCAGCAGAGACTGTCAATTTC...CTGGTGGTTCTGAGCACATAGACGCCTATTAGTCCTTCTGGTCAGTGAACGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356458.7
ENST00000673912.1
CDS-3UTR GCA 90 bp TTTCGTTCACTGACCAGAAGGACTAATAGGCGTCTATGTGCTCAGAACCACCAGAACCCGGGTGAGCTCTaGCATCGCCGTCTTTGGATC +
Preference number: 4 (lower is better)
Translates to: FRSLTRRTNRRLCAQNHQNPGEL*HRRLWI
Trigger: GATCCAAAGACGGCGATGGCAGAGCTCACCCGGGTT...CTGGTGGTTCTGAGCACATAGACGCCTATTAGTCCTTCTGGTCAGTGAACGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356458.7
ENST00000673912.1
CDS-3UTR GCA 90 bp TTACCACCAGGAAACTCCCATCGTTCAAGCCAACCGCTAAGGCTTTCCCATCAGATCATCGCTCACTGTTaGACAGATGGGCAGGAGAGG +
Preference number: 4 (lower is better)
Translates to: LPPGNSHRSSQPLRLSHQIIAHC*TDGQER
Trigger: CCTCTCCTGCCCATCTGTGCAACAGTGAGCGATGAT...CTGATGGGAAAGCCTTAGCGGTTGGCTTGAACGATGGGAGTTTCCTGGTGGTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000673655.1
ENST00000673746.1
ENST00000673916.1
ENST00000674035.1
CDS-3UTR GCA 90 bp CTTCAACAGTGTCAGCATTTACCACCAGGAAACTCCCATCGTTCAAGCCAACCGACTGCCAGCATACGGTaGTGGGCAGATAGTTCCCAG +
Preference number: 4 (lower is better)
Translates to: LQQCQHLPPGNSHRSSQPTASIR*WADSSQ
Trigger: CTGGGAACTATCTGCCCAGCACCGTATGCTGGCAGT...CGGTTGGCTTGAACGATGGGAGTTTCCTGGTGGTAAATGCTGACACTGTTGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000673655.1
ENST00000673746.1
ENST00000673916.1
ENST00000674035.1
CDS-3UTR GCA 90 bp TTTACCACCAGGAAACTCCCATCGTTCAAGCCAACCGCTAAGGCTTTCCCATCAACTGCCAGCATACGGTaGTGGGCAGATAGTTCCCAG +
Preference number: 4 (lower is better)
Translates to: FTTRKLPSFKPTAKAFPSTASIR*WADSSQ
Trigger: CTGGGAACTATCTGCCCAGCACCGTATGCTGGCAGT...TGATGGGAAAGCCTTAGCGGTTGGCTTGAACGATGGGAGTTTCCTGGTGGTAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000673655.1
ENST00000673746.1
ENST00000673916.1
ENST00000674035.1
CDS-3UTR GCA 90 bp GAGGCACCTCAGCATGGCCTCTGCAGTTGCTGGCTGGTAGCAGCAGCAGCAATAGAAGGTCTTATTATATaGCGTTTGCCTCTTGGAGCT +
Preference number: 4 (lower is better)
Translates to: EAPQHGLCSCWLVAAAAIEGLII*RLPLGA
Trigger: AGCTCCAAGAGGCAAACGGCATATAATAAGACCTTC...TATTGCTGCTGCTGCTACCAGCCAGCAACTGCAGAGGCCATGCTGAGGTGCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp ACGGTTTTGGAGAGTCCAGATTATGGGAGCAGTTGTGTAACTTCTGCAGCGTTTCGCTGTCCACCAGCTTaGTCTCCTGGGTCCCCACAA +
Preference number: 4 (lower is better)
Translates to: TVLESPDYGSSCVTSAAFRCPPA*SPGSPQ
Trigger: TTGTGGGGACCCAGGAGAGCAAGCTGGTGGACAGCG...AAACGCTGCAGAAGTTACACAACTGCTCCCATAATCTGGACTCTCCAAAACCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp TTTCGTTCACTGACCAGAAGGACTAATAGGCGTCTATGTGCTCAGAACCACCAGCAGACAGTGATGGTGTaGTCAGGGTCCACTCCCACC +
Preference number: 4 (lower is better)
Translates to: FRSLTRRTNRRLCAQNHQQTVMV*SGSTPT
Trigger: GGTGGGAGTGGACCCTGAGCACACCATCACTGTCTG...CTGGTGGTTCTGAGCACATAGACGCCTATTAGTCCTTCTGGTCAGTGAACGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp AATTTTCGTTCACTGACCAGAAGGACTAATAGGCGTCTATGTGCTCAGAACCACATCAGGGCTGTAGGCTaGACACCTGGCCGCATGGCC +
Preference number: 4 (lower is better)
Translates to: NFRSLTRRTNRRLCAQNHIRAVG*TPGRMA
Trigger: GGCCATGCGGCCAGGTGTGCAGCCTACAGCCCTGAT...GTGGTTCTGAGCACATAGACGCCTATTAGTCCTTCTGGTCAGTGAACGAAAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp AATGAAGTCACCTCAACTCCACTCAGGGTGGTACACCAAGGTGCAGCCTTGGGTGACATCAGCCTTGTCTaGATTTCGTGGCCAGATTCC +
Preference number: 4 (lower is better)
Translates to: NEVTSTPLRVVHQGAALGDISLV*ISWPDS
Trigger: GGAATCTGGCCACGAAATGCAGACAAGGCTGATGTC...ACCCAAGGCTGCACCTTGGTGTACCACCCTGAGTGGAGTTGAGGTGACTTCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp TTTCGTTCACTGACCAGAAGGACTAATAGGCGTCTATGTGCTCAGAACCACCAGCCTCAGCATGGCCTCTaGAGTTGCTGGCTGGTAGCA +
Preference number: 4 (lower is better)
Translates to: FRSLTRRTNRRLCAQNHQPQHGL*SCWLVA
Trigger: TGCTACCAGCCAGCAACTGCAGAGGCCATGCTGAGG...CTGGTGGTTCTGAGCACATAGACGCCTATTAGTCCTTCTGGTCAGTGAACGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp CTTGTCAGCCAGGTCCCAGATCCGGGCTGTGCCATCGTTGCTGGCAGAGATGAACAACCACCTCATTCATaGACAAGCATTTTCCAAGTG +
Preference number: 4 (lower is better)
Translates to: LVSQVPDPGCAIVAGRDEQPPHS*TSIFQV
Trigger: CACTTGGAAAATGCTTGTGCATGAATGAGGTGGTTG...TTCATCTCTGCCAGCAACGATGGCACAGCCCGGATCTGGGACCTGGCTGACAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR CCA 90 bp AATTTTCGTTCACTGACCAGAAGGACTAATAGGCGTCTATGTGCTCAGAACCACCGAGATCTCGCCGCTTaGAAACAGCGACGCCCCGGA +
Preference number: 4 (lower is better)
Translates to: NFRSLTRRTNRRLCAQNHRDLAA*KQRRPG
Trigger: TCCGGGGCGTCGCTGTTTCCAAGCGGCGAGATCTCG...GTGGTTCTGAGCACATAGACGCCTATTAGTCCTTCTGGTCAGTGAACGAAAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356458.7
ENST00000673912.1
CDS-3UTR CCA 90 bp GACCCTTCGCGGTTGTGGATTCTGCGTGAACACTTAGTACTGGATGTTCACCAAGGCTCCTTCCCGACTTaGCCAGTTGCAACGAGAGTT +
Preference number: 4 (lower is better)
Translates to: DPSRLWILREHLVLDVHQGSFPT*PVATRV
Trigger: AACTCTCGTTGCAACTGGCCAAGTCGGGAAGGAGCC...TTGGTGAACATCCAGTACTAAGTGTTCACGCAGAATCCACAACCGCGAAGGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR CCA 90 bp TCTCCGTCTTTGGTTCCCACTAAGATTTTTCCTTTTCCACGGCACACGGAGCGCAATATCTCACTGTCCTaGGTCCCTGCTAGAAGGCGG +
Preference number: 4 (lower is better)
Translates to: SPSLVPTKIFPFPRHTERNISLS*VPARRR
Trigger: CCGCCTTCTAGCAGGGACCCAGGACAGTGAGATATT...GCGCTCCGTGTGCCGTGGAAAAGGAAAAATCTTAGTGGGAACCAAAGACGGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR CCA 90 bp GAGGCACCTCAGCATGGCCTCTGCAGTTGCTGGCTGGTAGCAGCAGCAGCAATAACCAGTTTGTCAACATaGTGTGGGTTACACTTTACC +
Preference number: 4 (lower is better)
Translates to: EAPQHGLCSCWLVAAAAITSLST*CGLHFT
Trigger: GGTAAAGTGTAACCCACACCATGTTGACAAACTGGT...TATTGCTGCTGCTGCTACCAGCCAGCAACTGCAGAGGCCATGCTGAGGTGCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp CATTTACCACCAGGAAACTCCCATCGTTCAAGCCAACCGCTAAGGCTTTCCCATGCCAGCATACGGTGCTaGGCAGATAGTTCCCAGATG +
Preference number: 4 (lower is better)
Translates to: HLPPGNSHRSSQPLRLSHASIRC*ADSSQM
Trigger: CATCTGGGAACTATCTGCCCAGCACCGTATGCTGGC...ATGGGAAAGCCTTAGCGGTTGGCTTGAACGATGGGAGTTTCCTGGTGGTAAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000673655.1
ENST00000673746.1
ENST00000673916.1
ENST00000674035.1
CDS-3UTR CCA 90 bp CTTCAACAGTGTCAGCATTTACCACCAGGAAACTCCCATCGTTCAAGCCAACCGGCCAGCATACGGTGCTaGGCAGATAGTTCCCAGATG +
Preference number: 4 (lower is better)
Translates to: LQQCQHLPPGNSHRSSQPASIRC*ADSSQM
Trigger: CATCTGGGAACTATCTGCCCAGCACCGTATGCTGGC...CGGTTGGCTTGAACGATGGGAGTTTCCTGGTGGTAAATGCTGACACTGTTGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000673655.1
ENST00000673746.1
ENST00000673916.1
ENST00000674035.1
CDS-3UTR CCA 90 bp CACATACTTGTCATCATAAGAGAAACGGATGTTCGTCACGTGAGCCGAGTGACCACCAGCTTGCTCTCCTaGGTCCCCACAAACTCCCTG +
Preference number: 4 (lower is better)
Translates to: HILVIIRETDVRHVSRVTTSLLS*VPTNSL
Trigger: CAGGGAGTTTGTGGGGACCCAGGAGAGCAAGCTGGT...GGTCACTCGGCTCACGTGACGAACATCCGTTTCTCTTATGATGACAAGTATGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR CCA 90 bp AGTGGCCAGGCCCCAGATCTCCCCTTCCATGTGACCATCAATCAGGATGTTAGATGGAGAGGGTGTGTTTaGTCATGGCGTCCCATATGT +
Preference number: 4 (lower is better)
Translates to: SGQAPDLPFHVTINQDVRWRGCV*SWRPIC
Trigger: ACATATGGGACGCCATGACCAAACACACCCTCTCCA...TCTAACATCCTGATTGATGGTCACATGGAAGGGGAGATCTGGGGCCTGGCCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR CCA 90 bp TTTCGTTCACTGACCAGAAGGACTAATAGGCGTCTATGTGCTCAGAACCACCAGTTCACCCCCTTGGAGTaGAAGCACCGCAGCATGGAG +
Preference number: 4 (lower is better)
Translates to: FRSLTRRTNRRLCAQNHQFTPLE*KHRSME
Trigger: CTCCATGCTGCGGTGCTTCCACTCCAAGGGGGTGAA...CTGGTGGTTCTGAGCACATAGACGCCTATTAGTCCTTCTGGTCAGTGAACGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp AATTTTCGTTCACTGACCAGAAGGACTAATAGGCGTCTATGTGCTCAGAACCACCTCGGCTGGCAACCTTaGCACCTTCCTGCCATCGCC +
Preference number: 4 (lower is better)
Translates to: NFRSLTRRTNRRLCAQNHLGWQP*HLPAIA
Trigger: GGCGATGGCAGGAAGGTGCCAAGGTTGCCAGCCGAG...GTGGTTCTGAGCACATAGACGCCTATTAGTCCTTCTGGTCAGTGAACGAAAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp GATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACAGAAAACGGTGACCCCCTCGGCTaGCAACCTTGGCACCTTCCT +
Preference number: 4 (lower is better)
Translates to: DRQTWLSLCITSHMVTENGDPLG*QPWHLP
Trigger: AGGAAGGTGCCAAGGTTGCCAGCCGAGGGGGTCACC...GTTTTCTGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp GTACAAGATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACACCTTGGAAGGGTGAGTaGCCAGGCCCCAGATCTCCC +
Preference number: 4 (lower is better)
Translates to: VQDRQTWLSLCITSHMVTPWKGE*PGPRSP
Trigger: GGGAGATCTGGGGCCTGGCCACTCACCCTTCCAAGG...TGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATCTTGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp TACAAGATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACAGCCTTGGAAGGGTGAGTaGCCAGGCCCCAGATCTCCC +
Preference number: 4 (lower is better)
Translates to: YKIGRHGYHSASPVTWLQPWKGE*PGPRSP
Trigger: GGGAGATCTGGGGCCTGGCCACTCACCCTTCCAAGG...CTGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATCTTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp ATCACGGTTTTGGAGAGTCCAGATTATGGGAGCAGTTGTGTAACTTCTGCAGCGGCACACCTGGCCGCATaGCCCAAGCTCACCTTGTTT +
Preference number: 4 (lower is better)
Translates to: ITVLESPDYGSSCVTSAAAHLAA*PKLTLF
Trigger: AAACAAGGTGAGCTTGGGCCATGCGGCCAGGTGTGC...CGCTGCAGAAGTTACACAACTGCTCCCATAATCTGGACTCTCCAAAACCGTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp AGTGGCCAGGCCCCAGATCTCCCCTTCCATGTGACCATCAATCAGGATGTTAGAGACCCTTCGCGGTTGTaGATTCTGCGTGAACACTTA +
Preference number: 4 (lower is better)
Translates to: SGQAPDLPFHVTINQDVRDPSRL*ILREHL
Trigger: TAAGTGTTCACGCAGAATCCACAACCGCGAAGGGTC...TCTAACATCCTGATTGATGGTCACATGGAAGGGGAGATCTGGGGCCTGGCCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR TCA 90 bp GCAGCCCACACAACTGGAAACTTTCAAAGGCACTTAATGGATATAAAACTCTGCACCCAGTTCGCTCACTaGAGTTTGCGGTGCGCCGGG +
Preference number: 4 (lower is better)
Translates to: AAHTTGNFQRHLMDIKLCTQFAH*SLRCAG
Trigger: CCCGGCGCACCGCAAACTTCAGTGAGCGAACTGGGT...GCAGAGTTTTATATCCATTAAGTGCCTTTGAAAGTTTCCAGTTGTGTGGGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356458.7
ENST00000673912.1
CDS-3UTR TCA 90 bp AGATTGTTAGCACCGAAGGCCACGGAGAGCATCGTCTGCATTTTGGCAGCTCCCACCACTCTGTTTGGCTaGTATGGATCCCAGGAAATA +
Preference number: 4 (lower is better)
Translates to: RLLAPKATESIVCILAAPTTLFG*YGSQEI
Trigger: TATTTCCTGGGATCCATATCAGCCAAACAGAGTGGT...GGGAGCTGCCAAAATGCAGACGATGCTCTCCGTGGCCTTCGGTGCTAACAATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR TCA 90 bp AATGAAGTCACCTCAACTCCACTCAGGGTGGTACACCAAGGTGCAGCCTTGGGTGCACTATGTGCTCCTTaGATGGTGCGGACTAAATTG +
Preference number: 4 (lower is better)
Translates to: NEVTSTPLRVVHQGAALGALCAP*MVRTKL
Trigger: CAATTTAGTCCGCACCATTCAAGGAGCACATAGTGC...ACCCAAGGCTGCACCTTGGTGTACCACCCTGAGTGGAGTTGAGGTGACTTCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp AATTTTCGTTCACTGACCAGAAGGACTAATAGGCGTCTATGTGCTCAGAACCACGAGATCCGTCGGGGCTaGAAGCTACACTGCGAACCG +
Preference number: 4 (lower is better)
Translates to: NFRSLTRRTNRRLCAQNHEIRRG*KLHCEP
Trigger: CGGTTCGCAGTGTAGCTTTCAGCCCCGACGGATCTC...GTGGTTCTGAGCACATAGACGCCTATTAGTCCTTCTGGTCAGTGAACGAAAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp ATCACGGTTTTGGAGAGTCCAGATTATGGGAGCAGTTGTGTAACTTCTGCAGCGCCTCCACTGGAAAACTaGGTGATCAGCCCCTCCTGT +
Preference number: 4 (lower is better)
Translates to: ITVLESPDYGSSCVTSAAPPLEN*VISPSC
Trigger: ACAGGAGGGGCTGATCACTCAGTTTTCCAGTGGAGG...CGCTGCAGAAGTTACACAACTGCTCCCATAATCTGGACTCTCCAAAACCGTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp AATGAAGTCACCTCAACTCCACTCAGGGTGGTACACCAAGGTGCAGCCTTGGGTTGTGTGTCCCACACATaGATAGCAGCATCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: NEVTSTPLRVVHQGAALGCVSHT*IAASLP
Trigger: TGGAAGAGATGCTGCTATTCATGTGTGGGACACACA...ACCCAAGGCTGCACCTTGGTGTACCACCCTGAGTGGAGTTGAGGTGACTTCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp CTGCAGCGTTTTGAGCTTGTGCATCCGGGGCAGCATGGTAGGCATTTCCCAACGAGTGATGGCACGAATTaGAGGGTTATCTTCCAAAAG +
Preference number: 4 (lower is better)
Translates to: LQRFELVHPGQHGRHFPTSDGTN*RVIFQK
Trigger: CTTTTGGAAGATAACCCTTCAATTCGTGCCATCACT...CGTTGGGAAATGCCTACCATGCTGCCCCGGATGCACAAGCTCAAAACGCTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp TTTCGTTCACTGACCAGAAGGACTAATAGGCGTCTATGTGCTCAGAACCACCAGCCTTCCATGTGCCCCTaGACAAGCAGTGTCATTGGG +
Preference number: 4 (lower is better)
Translates to: FRSLTRRTNRRLCAQNHQPSMCP*TSSVIG
Trigger: CCCAATGACACTGCTTGTTCAGGGGCACATGGAAGG...CTGGTGGTTCTGAGCACATAGACGCCTATTAGTCCTTCTGGTCAGTGAACGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp TGTCCAAGTCATATTCCGTCATACAACCAACTCCAAGGAACTCTAACTCACTTTCGGCGCCGCCCACCGTaGGCAGCACAGAGTCATTGT +
Preference number: 4 (lower is better)
Translates to: CPSHIPSYNQLQGTLTHFRRRPP*AAQSHC
Trigger: ACAATGACTCTGTGCTGCTCACGGTGGGCGGCGCCG...AAAGTGAGTTAGAGTTCCTTGGAGTTGGTTGTATGACGGAATATGACTTGGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp CTTCCACATGGTTATTTCAATGCAAGATCCGATCAGCATGAAGAGTCTAGTACACGGCGCCGCCCACCGTaGGCAGCACAGAGTCATTGT +
Preference number: 4 (lower is better)
Translates to: LPHGYFNARSDQHEESSTRRRPP*AAQSHC
Trigger: ACAATGACTCTGTGCTGCTCACGGTGGGCGGCGCCG...TGTACTAGACTCTTCATGCTGATCGGATCTTGCATTGAAATAACCATGTGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp GTACAAGATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACACCTGTGGAGAGGTTCTaGACGATGCCAGCCGCTGCT +
Preference number: 4 (lower is better)
Translates to: VQDRQTWLSLCITSHMVTPVERF*TMPAAA
Trigger: AGCAGCGGCTGGCATCGTTCAGAACCTCTCCACAGG...TGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATCTTGTAC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp ATCACGGTTTTGGAGAGTCCAGATTATGGGAGCAGTTGTGTAACTTCTGCAGCGCGTTGCTGGCAGAGATaGAGAGGTCCTTGGAAGGGT +
Preference number: 4 (lower is better)
Translates to: ITVLESPDYGSSCVTSAARCWQR*RGPWKG
Trigger: ACCCTTCCAAGGACCTCTTCATCTCTGCCAGCAACG...CGCTGCAGAAGTTACACAACTGCTCCCATAATCTGGACTCTCCAAAACCGTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp GAGGCACCTCAGCATGGCCTCTGCAGTTGCTGGCTGGTAGCAGCAGCAGCAATATGTTCACCAACAAGATaGCAAACTCTCCATTCTTCA +
Preference number: 4 (lower is better)
Translates to: EAPQHGLCSCWLVAAAAICSPTR*QTLHSS
Trigger: TGAAGAATGGAGAGTTTGTCATCTTGTTGGTGAACA...TATTGCTGCTGCTGCTACCAGCCAGCAACTGCAGAGGCCATGCTGAGGTGCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp AATGAAGTCACCTCAACTCCACTCAGGGTGGTACACCAAGGTGCAGCCTTGGGTGATTTGTGCCCTGAGTaGGGTCATAGAAGTCAACTG +
Preference number: 4 (lower is better)
Translates to: NEVTSTPLRVVHQGAALGDLCPE*GHRSQL
Trigger: CAGTTGACTTCTATGACCTCACTCAGGGCACAAATC...ACCCAAGGCTGCACCTTGGTGTACCACCCTGAGTGGAGTTGAGGTGACTTCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp CACATACTTGTCATCATAAGAGAAACGGATGTTCGTCACGTGAGCCGAGTGACCACTTCTGCAGCGTTTTaGGCTTGTGCATCCGGGGCA +
Preference number: 4 (lower is better)
Translates to: HILVIIRETDVRHVSRVTTSAAF*ACASGA
Trigger: TGCCCCGGATGCACAAGCTCAAAACGCTGCAGAAGT...GGTCACTCGGCTCACGTGACGAACATCCGTTTCTCTTATGATGACAAGTATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR TCA 90 bp GTGTCAGCATTTACCACCAGGAAACTCCCATCGTTCAAGCCAACCGCTAAGGCTGGTGATGGTGCTCCATaGACCATGTTCTCTACTCCT +
Preference number: 4 (lower is better)
Translates to: VSAFTTRKLPSFKPTAKAGDGAP*TMFSTP
Trigger: AGGAGTAGAGAACATGGTTCATGGAGCACCATCACC...AGCCTTAGCGGTTGGCTTGAACGATGGGAGTTTCCTGGTGGTAAATGCTGACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673746.1
CDS-3UTR TCA 90 bp TTCAACAGTGTCAGCATTTACCACCAGGAAACTCCCATCGTTCAAGCCAACCGCGCAGTAGATGTCCTCTaGGGCTCCAGGGTACTTTGT +
Preference number: 4 (lower is better)
Translates to: FNSVSIYHQETPIVQANRAVDVL*GSRVLC
Trigger: ACAAAGTACCCTGGAGCCTCAGAGGACATCTACTGC...GCGGTTGGCTTGAACGATGGGAGTTTCCTGGTGGTAAATGCTGACACTGTTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673916.1
CDS-3UTR GCA 90 bp ACGGTTTTGGAGAGTCCAGATTATGGGAGCAGTTGTGTAACTTCTGCAGCGTTTGAAATTGACAGTCTCTaGTGCCAGCGGACGCCACCG +
Preference number: 4 (lower is better)
Translates to: TVLESPDYGSSCVTSAAFEIDSL*CQRTPP
Trigger: CGGTGGCGTCCGCTGGCAGCAGAGACTGTCAATTTC...AAACGCTGCAGAAGTTACACAACTGCTCCCATAATCTGGACTCTCCAAAACCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356458.7
ENST00000673912.1
CDS-3UTR GCA 90 bp ATCACGGTTTTGGAGAGTCCAGATTATGGGAGCAGTTGTGTAACTTCTGCAGCGTGTAGTACAGGTTGTTaGGGCACTGGTGACCCCGGT +
Preference number: 4 (lower is better)
Translates to: ITVLESPDYGSSCVTSAACSTGC*GTGDPG
Trigger: ACCGGGGTCACCAGTGCCGCAACAACCTGTACTACA...CGCTGCAGAAGTTACACAACTGCTCCCATAATCTGGACTCTCCAAAACCGTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp GACCCTTCGCGGTTGTGGATTCTGCGTGAACACTTAGTACTGGATGTTCACCAAAGTAGACCACCTCCTTaGCTGCCGTGTAGTACAGGT +
Preference number: 4 (lower is better)
Translates to: DPSRLWILREHLVLDVHQSRPPP*LPCSTG
Trigger: ACCTGTACTACACGGCAGGCAAGGAGGTGGTCTACT...TTGGTGAACATCCAGTACTAAGTGTTCACGCAGAATCCACAACCGCGAAGGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR GCA 90 bp CAACAGTGTCAGCATTTACCACCAGGAAACTCCCATCGTTCAAGCCAACCGCTAATCATCGCTCACTGTTaGACAGATGGGCAGGAGAGG +
Preference number: 4 (lower is better)
Translates to: QQCQHLPPGNSHRSSQPLIIAHC*TDGQER
Trigger: CCTCTCCTGCCCATCTGTGCAACAGTGAGCGATGAT...TAGCGGTTGGCTTGAACGATGGGAGTTTCCTGGTGGTAAATGCTGACACTGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000673655.1
ENST00000673746.1
ENST00000673916.1
ENST00000674035.1
CDS-3UTR GCA 90 bp CATTTACCACCAGGAAACTCCCATCGTTCAAGCCAACCGCTAAGGCTTTCCCATATCATCGCTCACTGTTaGACAGATGGGCAGGAGAGG +
Preference number: 4 (lower is better)
Translates to: HLPPGNSHRSSQPLRLSHIIAHC*TDGQER
Trigger: CCTCTCCTGCCCATCTGTGCAACAGTGAGCGATGAT...ATGGGAAAGCCTTAGCGGTTGGCTTGAACGATGGGAGTTTCCTGGTGGTAAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000673655.1
ENST00000673746.1
ENST00000673916.1
ENST00000674035.1
CDS-3UTR GCA 90 bp ATCACGGTTTTGGAGAGTCCAGATTATGGGAGCAGTTGTGTAACTTCTGCAGCGACTGCCAGCATACGGTaGTGGGCAGATAGTTCCCAG +
Preference number: 4 (lower is better)
Translates to: ITVLESPDYGSSCVTSAATASIR*WADSSQ
Trigger: CTGGGAACTATCTGCCCAGCACCGTATGCTGGCAGT...CGCTGCAGAAGTTACACAACTGCTCCCATAATCTGGACTCTCCAAAACCGTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp TTCAACAGTGTCAGCATTTACCACCAGGAAACTCCCATCGTTCAAGCCAACCGCTTTGAGTTTCCGTACTaGCAGCATACGGTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: FNSVSIYHQETPIVQANRFEFPY*QHTVLG
Trigger: GCCCAGCACCGTATGCTGGCAGTACGGAAACTCAAA...GCGGTTGGCTTGAACGATGGGAGTTTCCTGGTGGTAAATGCTGACACTGTTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000673655.1
ENST00000673746.1
ENST00000673916.1
ENST00000674035.1
CDS-3UTR GCA 90 bp CATTTACCACCAGGAAACTCCCATCGTTCAAGCCAACCGCTAAGGCTTTCCCATTTTGAGTTTCCGTACTaGCAGCATACGGTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: HLPPGNSHRSSQPLRLSHFEFPY*QHTVLG
Trigger: GCCCAGCACCGTATGCTGGCAGTACGGAAACTCAAA...ATGGGAAAGCCTTAGCGGTTGGCTTGAACGATGGGAGTTTCCTGGTGGTAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000673655.1
ENST00000673746.1
ENST00000673916.1
ENST00000674035.1
CDS-3UTR GCA 90 bp AATTTTCGTTCACTGACCAGAAGGACTAATAGGCGTCTATGTGCTCAGAACCACCGCTGTCCACCAGCTTaGTCTCCTGGGTCCCCACAA +
Preference number: 4 (lower is better)
Translates to: NFRSLTRRTNRRLCAQNHRCPPA*SPGSPQ
Trigger: TTGTGGGGACCCAGGAGAGCAAGCTGGTGGACAGCG...GTGGTTCTGAGCACATAGACGCCTATTAGTCCTTCTGGTCAGTGAACGAAAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp GAGGCACCTCAGCATGGCCTCTGCAGTTGCTGGCTGGTAGCAGCAGCAGCAATACAGGAGCTTTCCAGTTaGACTGAAGTTGATGTAATT +
Preference number: 4 (lower is better)
Translates to: EAPQHGLCSCWLVAAAAIQELSS*TEVDVI
Trigger: AATTACATCAACTTCAGTGCAACTGGAAAGCTCCTG...TATTGCTGCTGCTGCTACCAGCCAGCAACTGCAGAGGCCATGCTGAGGTGCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp TTTCGTTCACTGACCAGAAGGACTAATAGGCGTCTATGTGCTCAGAACCACCAGACGGAGAGCATCGTCTaGATTTTGGCAGCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: FRSLTRRTNRRLCAQNHQTESIV*ILAAPR
Trigger: CCTGGGAGCTGCCAAAATGCAGACGATGCTCTCCGT...CTGGTGGTTCTGAGCACATAGACGCCTATTAGTCCTTCTGGTCAGTGAACGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp ATCACGGTTTTGGAGAGTCCAGATTATGGGAGCAGTTGTGTAACTTCTGCAGCGACGGAGAGCATCGTCTaGATTTTGGCAGCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: ITVLESPDYGSSCVTSAATESIV*ILAAPR
Trigger: CCTGGGAGCTGCCAAAATGCAGACGATGCTCTCCGT...CGCTGCAGAAGTTACACAACTGCTCCCATAATCTGGACTCTCCAAAACCGTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp GATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACAGAAAACCCCAGATCCGGGCTGTaGCATCGTTGCTGGCAGAGA +
Preference number: 4 (lower is better)
Translates to: DRQTWLSLCITSHMVTENPRSGL*HRCWQR
Trigger: TCTCTGCCAGCAACGATGGCACAGCCCGGATCTGGG...GTTTTCTGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp GAGGCACCTCAGCATGGCCTCTGCAGTTGCTGGCTGGTAGCAGCAGCAGCAATAACACCTGAATGTATTTaGCATCCGCAGAAAAATCCA +
Preference number: 4 (lower is better)
Translates to: EAPQHGLCSCWLVAAAAITPECI*HPQKNP
Trigger: TGGATTTTTCTGCGGATGGCAAATACATTCAGGTGT...TATTGCTGCTGCTGCTACCAGCCAGCAACTGCAGAGGCCATGCTGAGGTGCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp TCTGGCTCCCTGTGGAGAGGTTCTGAACGATGCCAGCCGCTGCTGTGTGGAAGAAGTGAATATAGAGTATaGGTACAAGCACAAACACCG +
Preference number: 4 (lower is better)
Translates to: SGSLWRGSERCQPLLCGRSEYRV*VQAQTP
Trigger: CGGTGTTTGTGCTTGTACGCATACTCTATATTCACT...TCTTCCACACAGCAGCGGCTGGCATCGTTCAGAACCTCTCCACAGGGAGCCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR GCA 90 bp CAACAGTGTCAGCATTTACCACCAGGAAACTCCCATCGTTCAAGCCAACCGCTATGCCTGAAGCTGGTCTaGATGGAGAGCATCAATGGG +
Preference number: 4 (lower is better)
Translates to: QQCQHLPPGNSHRSSQPLCLKLV*MESING
Trigger: CCCATTGATGCTCTCCATGCAGACCAGCTTCAGGCA...TAGCGGTTGGCTTGAACGATGGGAGTTTCCTGGTGGTAAATGCTGACACTGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673916.1
CDS-3UTR CCA 90 bp GAGGCACCTCAGCATGGCCTCTGCAGTTGCTGGCTGGTAGCAGCAGCAGCAATAAACAAGCAGTGTCATTaGGCCACTCTTATCAATTTC +
Preference number: 4 (lower is better)
Translates to: EAPQHGLCSCWLVAAAAINKQCH*ATLINF
Trigger: GAAATTGATAAGAGTGGCCCAATGACACTGCTTGTT...TATTGCTGCTGCTGCTACCAGCCAGCAACTGCAGAGGCCATGCTGAGGTGCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp GTTGATGTAATTCACCCCCTTGGAGTGGAAGCACCGCAGCATGGAGAGGGTGTGTCCACAAAGTTATCATaGGATGCCACGGCAAGGTAT +
Preference number: 4 (lower is better)
Translates to: VDVIHPLGVEAPQHGEGVSTKLS*DATARY
Trigger: ATACCTTGCCGTGGCATCCCATGATAACTTTGTGGA...CACACCCTCTCCATGCTGCGGTGCTTCCACTCCAAGGGGGTGAATTACATCAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR CCA 90 bp ATCACGGTTTTGGAGAGTCCAGATTATGGGAGCAGTTGTGTAACTTCTGCAGCGGGAAGCACCGCAGCATaGAGAGGGTGTGTTTGGTCA +
Preference number: 4 (lower is better)
Translates to: ITVLESPDYGSSCVTSAAGSTAA*RGCVWS
Trigger: TGACCAAACACACCCTCTCCATGCTGCGGTGCTTCC...CGCTGCAGAAGTTACACAACTGCTCCCATAATCTGGACTCTCCAAAACCGTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp TGCTGCTCACCTTCCCATAAGCAGGTAACCGATGTCTTTCATTTAGGAAGCCTTTTCACCCCCTTGGAGTaGAAGCACCGCAGCATGGAG +
Preference number: 4 (lower is better)
Translates to: CCSPSHKQVTDVFHLGSLFTPLE*KHRSME
Trigger: CTCCATGCTGCGGTGCTTCCACTCCAAGGGGGTGAA...AAGGCTTCCTAAATGAAAGACATCGGTTACCTGCTTATGGGAAGGTGAGCAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp GAGCATCGTCTGCATTTTGGCAGCTCCCAGGGACCCGATGACCCCTTTCTTGTAGGAGAGTCCAGATTATaGGAGCAGTTGTGTAACTTC +
Preference number: 4 (lower is better)
Translates to: EHRLHFGSSQGPDDPFLVGESRL*EQLCNF
Trigger: GAAGTTACACAACTGCTCCCATAATCTGGACTCTCC...TACAAGAAAGGGGTCATCGGGTCCCTGGGAGCTGCCAAAATGCAGACGATGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR CCA 90 bp CTCCCATCGTTCAAGCCAACCGCTAAGGCTTTCCCATCAGGGGAAAAGGCACAGCTGTCACGCGAAGAATaGAATCTGAACATTCTCCCA +
Preference number: 4 (lower is better)
Translates to: LPSFKPTAKAFPSGEKAQLSREE*NLNILP
Trigger: TGGGAGAATGTTCAGATTCCATTCTTCGCGTGACAG...CTGTGCCTTTTCCCCTGATGGGAAAGCCTTAGCGGTTGGCTTGAACGATGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673746.1
CDS-3UTR CCA 90 bp CTTCAACAGTGTCAGCATTTACCACCAGGAAACTCCCATCGTTCAAGCCAACCGGCAGTGATCATGCCATaGCACTCCAGACTGGATGAC +
Preference number: 4 (lower is better)
Translates to: LQQCQHLPPGNSHRSSQPAVIMP*HSRLDD
Trigger: GTCATCCAGTCTGGAGTGCCATGGCATGATCACTGC...CGGTTGGCTTGAACGATGGGAGTTTCCTGGTGGTAAATGCTGACACTGTTGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673655.1
ENST00000674035.1
CDS-3UTR CCA 90 bp GACCCTTCGCGGTTGTGGATTCTGCGTGAACACTTAGTACTGGATGTTCACCAAACAGACATTCCTGTGTaGCACACACCATGCTTCCCC +
Preference number: 4 (lower is better)
Translates to: DPSRLWILREHLVLDVHQTDIPV*HTPCFP
Trigger: GGGGAAGCATGGTGTGTGCCACACAGGAATGTCTGT...TTGGTGAACATCCAGTACTAAGTGTTCACGCAGAATCCACAACCGCGAAGGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR TCA 90 bp CTGCAGCGTTTTGAGCTTGTGCATCCGGGGCAGCATGGTAGGCATTTCCCAACGTTTTGGTTATTGGTTTaGAATCAGTGTCCCACAGTC +
Preference number: 4 (lower is better)
Translates to: LQRFELVHPGQHGRHFPTFWLLV*NQCPTV
Trigger: GACTGTGGGACACTGATTTCAAACCAATAACCAAAA...CGTTGGGAAATGCCTACCATGCTGCCCCGGATGCACAAGCTCAAAACGCTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp AGCAGCCCACACAACTGGAAACTTTCAAAGGCACTTAATGGATATAAAACTCTGCGGGCGATCAAGGCATaGTCAGCCAGGCTCCACAGC +
Preference number: 4 (lower is better)
Translates to: SSPHNWKLSKALNGYKTLRAIKA*SARLHS
Trigger: GCTGTGGAGCCTGGCTGATCATGCCTTGATCGCCCG...CAGAGTTTTATATCCATTAAGTGCCTTTGAAAGTTTCCAGTTGTGTGGGCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp GTAACCGAGGCTTCAAAATTCGTCAGCGGGCTACATTATCAGATAGGATTTCTTGAGATCCGTCGGGGCTaGAAGCTACACTGCGAACCG +
Preference number: 4 (lower is better)
Translates to: VTEASKFVSGLHYQIGFLEIRRG*KLHCEP
Trigger: CGGTTCGCAGTGTAGCTTTCAGCCCCGACGGATCTC...AAGAAATCCTATCTGATAATGTAGCCCGCTGACGAATTTTGAAGCCTCGGTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp TGCTGCTCACCTTCCCATAAGCAGGTAACCGATGTCTTTCATTTAGGAAGCCTTGAGCCTTTTCTCGTTTaGGGAAGGGCACTGCGTGGT +
Preference number: 4 (lower is better)
Translates to: CCSPSHKQVTDVFHLGSLEPFLV*GRALRG
Trigger: ACCACGCAGTGCCCTTCCTCAAACGAGAAAAGGCTC...AAGGCTTCCTAAATGAAAGACATCGGTTACCTGCTTATGGGAAGGTGAGCAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp GAGCATCGTCTGCATTTTGGCAGCTCCCAGGGACCCGATGACCCCTTTCTTGTAAGTGATGGCACGAATTaGAGGGTTATCTTCCAAAAG +
Preference number: 4 (lower is better)
Translates to: EHRLHFGSSQGPDDPFLVSDGTN*RVIFQK
Trigger: CTTTTGGAAGATAACCCTTCAATTCGTGCCATCACT...TACAAGAAAGGGGTCATCGGGTCCCTGGGAGCTGCCAAAATGCAGACGATGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR TCA 90 bp GCAGCCCACACAACTGGAAACTTTCAAAGGCACTTAATGGATATAAAACTCTGCCCTGTGGAGAGGTTCTaGACGATGCCAGCCGCTGCT +
Preference number: 4 (lower is better)
Translates to: AAHTTGNFQRHLMDIKLCPVERF*TMPAAA
Trigger: AGCAGCGGCTGGCATCGTTCAGAACCTCTCCACAGG...GCAGAGTTTTATATCCATTAAGTGCCTTTGAAAGTTTCCAGTTGTGTGGGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp AGCAGCCCACACAACTGGAAACTTTCAAAGGCACTTAATGGATATAAAACTCTGAATATGCGCTCCAGGTaGCCCCCTCGGCTGGCAACC +
Preference number: 4 (lower is better)
Translates to: SSPHNWKLSKALNGYKTLNMRSR*PPRLAT
Trigger: GGTTGCCAGCCGAGGGGGTCACCTGGAGCGCATATT...CAGAGTTTTATATCCATTAAGTGCCTTTGAAAGTTTCCAGTTGTGTGGGCTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp ACTTGTCATCATAAGAGAAACGGATGTTCGTCACGTGAGCCGAGTGACCGAAGTTACAAACTGCGTGTCTaGGTCGGGGCGAAATTCCAC +
Preference number: 4 (lower is better)
Translates to: TCHHKRNGCSSREPSDRSYKLRV*VGAKFH
Trigger: GTGGAATTTCGCCCCGACTCAGACACGCAGTTTGTA...ACTTCGGTCACTCGGCTCACGTGACGAACATCCGTTTCTCTTATGATGACAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR TCA 90 bp ACGGTTTTGGAGAGTCCAGATTATGGGAGCAGTTGTGTAACTTCTGCAGCGTTTGGGTTGTGTACATTGTaGACACGGGGCCTGTGTGAG +
Preference number: 4 (lower is better)
Translates to: TVLESPDYGSSCVTSAAFGLCTL*TRGLCE
Trigger: CTCACACAGGCCCCGTGTTCACAATGTACACAACCC...AAACGCTGCAGAAGTTACACAACTGCTCCCATAATCTGGACTCTCCAAAACCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp TCTGGCTCCCTGTGGAGAGGTTCTGAACGATGCCAGCCGCTGCTGTGTGGAAGAATCCATTTAGAATGCTaGAGCACTTCTGTGGTAAAT +
Preference number: 4 (lower is better)
Translates to: SGSLWRGSERCQPLLCGRIHLEC*STSVVN
Trigger: ATTTACCACAGAAGTGCTTCAGCATTCTAAATGGAT...TCTTCCACACAGCAGCGGCTGGCATCGTTCAGAACCTCTCCACAGGGAGCCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR TCA 90 bp TCTGGCTCCCTGTGGAGAGGTTCTGAACGATGCCAGCCGCTGCTGTGTGGAAGACAAATAAGTTTTTCATaGCACACGGACACTATTGCT +
Preference number: 4 (lower is better)
Translates to: SGSLWRGSERCQPLLCGRQISFS*HTDTIA
Trigger: AGCAATAGTGTCCGTGTGTCATGAAAAACTTATTTG...TCTTCCACACAGCAGCGGCTGGCATCGTTCAGAACCTCTCCACAGGGAGCCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR TCA 90 bp GAGCATCGTCTGCATTTTGGCAGCTCCCAGGGACCCGATGACCCCTTTCTTGTACTGTCAGAAAAACAATaGCATCTTCCTGGATGTCGT +
Preference number: 4 (lower is better)
Translates to: EHRLHFGSSQGPDDPFLVLSEKQ*HLPGCR
Trigger: ACGACATCCAGGAAGATGTCATTGTTTTTCTGACAG...TACAAGAAAGGGGTCATCGGGTCCCTGGGAGCTGCCAAAATGCAGACGATGCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR TCA 90 bp AATGAAGTCACCTCAACTCCACTCAGGGTGGTACACCAAGGTGCAGCCTTGGGTCAAGCATTTTCCAAGTaGACAGACATTCCTGTGTGG +
Preference number: 4 (lower is better)
Translates to: NEVTSTPLRVVHQGAALGQAFSK*TDIPVW
Trigger: CCACACAGGAATGTCTGTTCACTTGGAAAATGCTTG...ACCCAAGGCTGCACCTTGGTGTACCACCCTGAGTGGAGTTGAGGTGACTTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR GCA 90 bp TGTCCAAGTCATATTCCGTCATACAACCAACTCCAAGGAACTCTAACTCACTTTTCGCTCACTGAAGTTTaGGGTGCGCCGGGGCTTCGC +
Preference number: 4 (lower is better)
Translates to: CPSHIPSYNQLQGTLTHFSLTEV*GAPGLR
Trigger: GCGAAGCCCCGGCGCACCGCAAACTTCAGTGAGCGA...AAAGTGAGTTAGAGTTCCTTGGAGTTGGTTGTATGACGGAATATGACTTGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356458.7
ENST00000673912.1
CDS-3UTR GCA 90 bp TTTCGTTCACTGACCAGAAGGACTAATAGGCGTCTATGTGCTCAGAACCACCAGGACCACCTCCTTGCCTaGCGTGTAGTACAGGTTGTT +
Preference number: 4 (lower is better)
Translates to: FRSLTRRTNRRLCAQNHQDHLLA*RVVQVV
Trigger: AACAACCTGTACTACACGGCAGGCAAGGAGGTGGTC...CTGGTGGTTCTGAGCACATAGACGCCTATTAGTCCTTCTGGTCAGTGAACGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp GCAGCCCACACAACTGGAAACTTTCAAAGGCACTTAATGGATATAAAACTCTGCCAGAGCGGTCATCGCTaGCTGTCACAGCCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: AAHTTGNFQRHLMDIKLCQSGHR*LSQPEA
Trigger: AGCCTCTGGCTGTGACAGGCAGCGATGACCGCTCTG...GCAGAGTTTTATATCCATTAAGTGCCTTTGAAAGTTTCCAGTTGTGTGGGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp GATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACAGAAAACAAGAGCCGTCCTTCATaGCCAGGGCCAGCTGAGATC +
Preference number: 4 (lower is better)
Translates to: DRQTWLSLCITSHMVTENKSRPS*PGPAEI
Trigger: GATCTCAGCTGGCCCTGGGCATGAAGGACGGCTCTT...GTTTTCTGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp ATCACGGTTTTGGAGAGTCCAGATTATGGGAGCAGTTGTGTAACTTCTGCAGCGCTCTGGGAGTGCTGCTaGCGATTATACACGACAGCA +
Preference number: 4 (lower is better)
Translates to: ITVLESPDYGSSCVTSAALWECC*RLYTTA
Trigger: TGCTGTCGTGTATAATCGGCAGCAGCACTCCCAGAG...CGCTGCAGAAGTTACACAACTGCTCCCATAATCTGGACTCTCCAAAACCGTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp TGCTGCTCACCTTCCCATAAGCAGGTAACCGATGTCTTTCATTTAGGAAGCCTTAGAATGTCGTCATCGTaGCCCAGGTACAGCCTCTGG +
Preference number: 4 (lower is better)
Translates to: CCSPSHKQVTDVFHLGSLRMSSS*PRYSLW
Trigger: CCAGAGGCTGTACCTGGGGCACGATGACGACATTCT...AAGGCTTCCTAAATGAAAGACATCGGTTACCTGCTTATGGGAAGGTGAGCAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp ACGGTTTTGGAGAGTCCAGATTATGGGAGCAGTTGTGTAACTTCTGCAGCGTTTCCCAGAGCTCCACGATaGCGTCCTTTCCACCTGTTA +
Preference number: 4 (lower is better)
Translates to: TVLESPDYGSSCVTSAAFPRAPR*RPFHLL
Trigger: TAACAGGTGGAAAGGACGGCATCGTGGAGCTCTGGG...AAACGCTGCAGAAGTTACACAACTGCTCCCATAATCTGGACTCTCCAAAACCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp TGCTGCTCACCTTCCCATAAGCAGGTAACCGATGTCTTTCATTTAGGAAGCCTTACCTTGGCACCTTCCTaGCATCGCCAGACAGTGATG +
Preference number: 4 (lower is better)
Translates to: CCSPSHKQVTDVFHLGSLTLAPS*HRQTVM
Trigger: CATCACTGTCTGGCGATGGCAGGAAGGTGCCAAGGT...AAGGCTTCCTAAATGAAAGACATCGGTTACCTGCTTATGGGAAGGTGAGCAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp ACGGTTTTGGAGAGTCCAGATTATGGGAGCAGTTGTGTAACTTCTGCAGCGTTTAAGCAAGGCGCTGCCTaGCAGGGTCCAGAACTTCAT +
Preference number: 4 (lower is better)
Translates to: TVLESPDYGSSCVTSAAFKQGAA*QGPELH
Trigger: ATGAAGTTCTGGACCCTGGCAGGCAGCGCCTTGCTT...AAACGCTGCAGAAGTTACACAACTGCTCCCATAATCTGGACTCTCCAAAACCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp TGCTGCTCACCTTCCCATAAGCAGGTAACCGATGTCTTTCATTTAGGAAGCCTTTGTAAAGCAAGGCGCTaGCTGCCAGGGTCCAGAACT +
Preference number: 4 (lower is better)
Translates to: CCSPSHKQVTDVFHLGSLCKARR*LPGSRT
Trigger: AGTTCTGGACCCTGGCAGGCAGCGCCTTGCTTTACA...AAGGCTTCCTAAATGAAAGACATCGGTTACCTGCTTATGGGAAGGTGAGCAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp CTGCAGCGTTTTGAGCTTGTGCATCCGGGGCAGCATGGTAGGCATTTCCCAACGACACCTGAATGTATTTaGCATCCGCAGAAAAATCCA +
Preference number: 4 (lower is better)
Translates to: LQRFELVHPGQHGRHFPTTPECI*HPQKNP
Trigger: TGGATTTTTCTGCGGATGGCAAATACATTCAGGTGT...CGTTGGGAAATGCCTACCATGCTGCCCCGGATGCACAAGCTCAAAACGCTGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp TTGTGGCAAATTCAGCGGATTTTAAGTATTGACCCTTCGCGGTTGTGGATTCTGACGGCTTCAGTTACCTaGTTCCCCAGGGGGACCTCA +
Preference number: 4 (lower is better)
Translates to: LWQIQRILSIDPSRLWILTASVT*FPRGTS
Trigger: TGAGGTCCCCCTGGGGAAGCAGGTAACTGAAGCCGT...CAGAATCCACAACCGCGAAGGGTCAATACTTAAAATCCGCTGAATTTGCCACAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR GCA 90 bp ATCACGGTTTTGGAGAGTCCAGATTATGGGAGCAGTTGTGTAACTTCTGCAGCGAGCGTGGGTCACACATaGGCAGTTGACATCAGCCTT +
Preference number: 4 (lower is better)
Translates to: ITVLESPDYGSSCVTSAASVGHT*AVDISL
Trigger: AAGGCTGATGTCAACTGCGCATGTGTGACCCACGCT...CGCTGCAGAAGTTACACAACTGCTCCCATAATCTGGACTCTCCAAAACCGTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp GTTGATGTAATTCACCCCCTTGGAGTGGAAGCACCGCAGCATGGAGAGGGTGTGACATGGTTATCACTCTaGATCACCAGTCACATGGTT +
Preference number: 4 (lower is better)
Translates to: VDVIHPLGVEAPQHGEGVTWLSL*ITSHMV
Trigger: AACCATGTGACTGGTGATGCAGAGTGATAACCATGT...CACACCCTCTCCATGCTGCGGTGCTTCCACTCCAAGGGGGTGAATTACATCAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR GCA 90 bp CCAGGAAACTCCCATCGTTCAAGCCAACCGCTAAGGCTTTCCCATCAGGGGAAAGAAAGATGTTGTTCTTaGCTCTTCTGTCACGCGAAG +
Preference number: 4 (lower is better)
Translates to: PGNSHRSSQPLRLSHQGKERCCS*LFCHAK
Trigger: CTTCGCGTGACAGAAGAGGCAAGAACAACATCTTTC...TTTCCCCTGATGGGAAAGCCTTAGCGGTTGGCTTGAACGATGGGAGTTTCCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673746.1
CDS-3UTR GCA 90 bp CATTTACCACCAGGAAACTCCCATCGTTCAAGCCAACCGCTAAGGCTTTCCCATTTCACATCCCCTTTTTaGCCTTGTCCACCCTGCTCT +
Preference number: 4 (lower is better)
Translates to: HLPPGNSHRSSQPLRLSHFTSPF*PCPPCS
Trigger: AGAGCAGGGTGGACAAGGGCAAAAAGGGGATGTGAA...ATGGGAAAGCCTTAGCGGTTGGCTTGAACGATGGGAGTTTCCTGGTGGTAAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673916.1
CDS-3UTR CCA 90 bp ATCATAAGAGAAACGGATGTTCGTCACGTGAGCCGAGTGACCGAAGTATCGCTTTGTCAGAATGGCCGGTaGCTGACGCCAGAAGTTTTC +
Preference number: 4 (lower is better)
Translates to: IIRETDVRHVSRVTEVSLCQNGR*LTPEVF
Trigger: GAAAACTTCTGGCGTCAGCCACCGGCCATTCTGACA...AAGCGATACTTCGGTCACTCGGCTCACGTGACGAACATCCGTTTCTCTTATGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR CCA 90 bp TTTCGTTCACTGACCAGAAGGACTAATAGGCGTCTATGTGCTCAGAACCACCAGAAAATCCTGTCAGAATaGCCGGTGGCTGACGCCAGA +
Preference number: 4 (lower is better)
Translates to: FRSLTRRTNRRLCAQNHQKILSE*PVADAR
Trigger: TCTGGCGTCAGCCACCGGCCATTCTGACAGGATTTT...CTGGTGGTTCTGAGCACATAGACGCCTATTAGTCCTTCTGGTCAGTGAACGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp AAAAGGAAGCTTTGTCAATGCTTCCCGCACACTCTCCGTGACTTTACGAATGCGTCAGCTCCACCTTCTTaGGGTGCAGTTTCCAGCATG +
Preference number: 4 (lower is better)
Translates to: KRKLCQCFPHTLRDFTNASAPPS*GAVSSM
Trigger: CATGCTGGAAACTGCACCCCAAGAAGGTGGAGCTGA...CGCATTCGTAAAGTCACGGAGAGTGTGCGGGAAGCATTGACAAAGCTTCCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR CCA 90 bp TGCTGCTCACCTTCCCATAAGCAGGTAACCGATGTCTTTCATTTAGGAAGCCTTAGCTCTGGCTCCCTGTaGAGAGGTTCTGAACGATGC +
Preference number: 4 (lower is better)
Translates to: CCSPSHKQVTDVFHLGSLSSGSL*RGSERC
Trigger: GCATCGTTCAGAACCTCTCCACAGGGAGCCAGAGCT...AAGGCTTCCTAAATGAAAGACATCGGTTACCTGCTTATGGGAAGGTGAGCAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp ACGGTTTTGGAGAGTCCAGATTATGGGAGCAGTTGTGTAACTTCTGCAGCGTTTGGTGTTGTCCCTATCTaGCTGGTGGCCACCACGTTT +
Preference number: 4 (lower is better)
Translates to: TVLESPDYGSSCVTSAAFGVVPI*LVATTF
Trigger: AAACGTGGTGGCCACCAGCCAGATAGGGACAACACC...AAACGCTGCAGAAGTTACACAACTGCTCCCATAATCTGGACTCTCCAAAACCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp ATCACGGTTTTGGAGAGTCCAGATTATGGGAGCAGTTGTGTAACTTCTGCAGCGTGTAATTCACCCCCTTaGAGTGGAAGCACCGCAGCA +
Preference number: 4 (lower is better)
Translates to: ITVLESPDYGSSCVTSAACNSPP*SGSTAA
Trigger: TGCTGCGGTGCTTCCACTCCAAGGGGGTGAATTACA...CGCTGCAGAAGTTACACAACTGCTCCCATAATCTGGACTCTCCAAAACCGTGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp TGTCCAAGTCATATTCCGTCATACAACCAACTCCAAGGAACTCTAACTCACTTTCTCGGCTGGCAACCTTaGCACCTTCCTGCCATCGCC +
Preference number: 4 (lower is better)
Translates to: CPSHIPSYNQLQGTLTHFLGWQP*HLPAIA
Trigger: GGCGATGGCAGGAAGGTGCCAAGGTTGCCAGCCGAG...AAAGTGAGTTAGAGTTCCTTGGAGTTGGTTGTATGACGGAATATGACTTGGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp CTTCCACATGGTTATTTCAATGCAAGATCCGATCAGCATGAAGAGTCTAGTACACTCGGCTGGCAACCTTaGCACCTTCCTGCCATCGCC +
Preference number: 4 (lower is better)
Translates to: LPHGYFNARSDQHEESSTLGWQP*HLPAIA
Trigger: GGCGATGGCAGGAAGGTGCCAAGGTTGCCAGCCGAG...TGTACTAGACTCTTCATGCTGATCGGATCTTGCATTGAAATAACCATGTGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp CTGCAGCGTTTTGAGCTTGTGCATCCGGGGCAGCATGGTAGGCATTTCCCAACGCTGATTCTGATATCTTaGATAGCAGATTTCCGGTCT +
Preference number: 4 (lower is better)
Translates to: LQRFELVHPGQHGRHFPTLILIS*IADFRS
Trigger: AGACCGGAAATCTGCTATCCAAGATATCAGAATCAG...CGTTGGGAAATGCCTACCATGCTGCCCCGGATGCACAAGCTCAAAACGCTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp GTACAAGATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACATTTCCCAACGGCTGGTaGCAAGGAGGCACCTCAGCA +
Preference number: 4 (lower is better)
Translates to: VQDRQTWLSLCITSHMVTFPNGW*QGGTSA
Trigger: TGCTGAGGTGCCTCCTTGCCACCAGCCGTTGGGAAA...TGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATCTTGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
3UTR CAA 72 bp AGATTATGGGAGCAGTTGTGTAACTTCTGCAGCGTTTaGAGCTTGTGCATCCGGGGCAGCATGGTAGGCATT +
Preference number: 4 (lower is better)
Translates to: RLWEQLCNFCSV*SLCIRGSMVGI
Trigger: AATGCCTACCATGCTGCCCCGGATGCACAAGCTCAAAACGCTGCAGAAGTTACACAACTGCTCCCATAATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
3UTR CAA 72 bp TCTGCATCACCAGTCACATGGTTACAGAAAACAGAATaGGGACTGCATAGGGACTCTACTGCGGGCCCAACA +
Preference number: 4 (lower is better)
Translates to: SASPVTWLQKTE*GLHRDSTAGPT
Trigger: TGTTGGGCCCGCAGTAGAGTCCCTATGCAGTCCCAATTCTGTTTTCTGTAACCATGTGACTGGTGATGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp AATTTTCGTTCACTGACCAGAAGGACTAATAGGCGTCTATGTGCTCAGAACCACAGAATGGCCGGTGGCTaGCGCCAGAAGTTTTCCCTT +
Preference number: 4 (lower is better)
Translates to: NFRSLTRRTNRRLCAQNHRMAGG*RQKFSL
Trigger: AAGGGAAAACTTCTGGCGTCAGCCACCGGCCATTCT...GTGGTTCTGAGCACATAGACGCCTATTAGTCCTTCTGGTCAGTGAACGAAAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp ATCACGGTTTTGGAGAGTCCAGATTATGGGAGCAGTTGTGTAACTTCTGCAGCGTCCAGACACCAGCACTaGGCTGTTGTAATTCGCATC +
Preference number: 4 (lower is better)
Translates to: ITVLESPDYGSSCVTSAASRHQH*AVVIRI
Trigger: GATGCGAATTACAACAGCTCAGTGCTGGTGTCTGGA...CGCTGCAGAAGTTACACAACTGCTCCCATAATCTGGACTCTCCAAAACCGTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp AATTTTCGTTCACTGACCAGAAGGACTAATAGGCGTCTATGTGCTCAGAACCACCCTCCACTGGAAAACTaGGTGATCAGCCCCTCCTGT +
Preference number: 4 (lower is better)
Translates to: NFRSLTRRTNRRLCAQNHPPLEN*VISPSC
Trigger: ACAGGAGGGGCTGATCACTCAGTTTTCCAGTGGAGG...GTGGTTCTGAGCACATAGACGCCTATTAGTCCTTCTGGTCAGTGAACGAAAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp GATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACAGAAAACGATGGATGGTCAGGCTaGGAATGTCGTCATCGTGCC +
Preference number: 4 (lower is better)
Translates to: DRQTWLSLCITSHMVTENDGWSG*ECRHRA
Trigger: GGCACGATGACGACATTCTCAGCCTGACCATCCATC...GTTTTCTGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp TACAAGATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACAGGATGGATGGTCAGGCTaGGAATGTCGTCATCGTGCC +
Preference number: 4 (lower is better)
Translates to: YKIGRHGYHSASPVTWLQDGWSG*ECRHRA
Trigger: GGCACGATGACGACATTCTCAGCCTGACCATCCATC...CTGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATCTTGTA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp CACATACTTGTCATCATAAGAGAAACGGATGTTCGTCACGTGAGCCGAGTGACCGCACACACTCCTCTCTaGTGTTGTCCTTTCAACAGC +
Preference number: 4 (lower is better)
Translates to: HILVIIRETDVRHVSRVTAHTPL*CCPFNS
Trigger: GCTGTTGAAAGGACAACATCAGAGAGGAGTGTGTGC...GGTCACTCGGCTCACGTGACGAACATCCGTTTCTCTTATGATGACAAGTATGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR TCA 90 bp GATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACAGAAAACCCTTCCATGTGCCCCTaGACAAGCAGTGTCATTGGG +
Preference number: 4 (lower is better)
Translates to: DRQTWLSLCITSHMVTENPSMCP*TSSVIG
Trigger: CCCAATGACACTGCTTGTTCAGGGGCACATGGAAGG...GTTTTCTGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp CTGCAGCGTTTTGAGCTTGTGCATCCGGGGCAGCATGGTAGGCATTTCCCAACGATCATTTCTTTTCTGTaGTGGAAAGAGACCATGTCT +
Preference number: 4 (lower is better)
Translates to: LQRFELVHPGQHGRHFPTIISFL*WKETMS
Trigger: AGACATGGTCTCTTTCCATCACAGAAAAGAAATGAT...CGTTGGGAAATGCCTACCATGCTGCCCCGGATGCACAAGCTCAAAACGCTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp TGCTGCTCACCTTCCCATAAGCAGGTAACCGATGTCTTTCATTTAGGAAGCCTTGCCCCACATACTTCTTaGATCTTGCGTGCTGTCCCT +
Preference number: 4 (lower is better)
Translates to: CCSPSHKQVTDVFHLGSLAPHTS*ILRAVP
Trigger: AGGGACAGCACGCAAGATTCAAGAAGTATGTGGGGC...AAGGCTTCCTAAATGAAAGACATCGGTTACCTGCTTATGGGAAGGTGAGCAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp AGCAGCCCACACAACTGGAAACTTTCAAAGGCACTTAATGGATATAAAACTCTGTTCCACGTCGGTGTCTaGCTCCTCGCTGTCCACCAG +
Preference number: 4 (lower is better)
Translates to: SSPHNWKLSKALNGYKTLFHVGV*LLAVHQ
Trigger: CTGGTGGACAGCGAGGAGTCAGACACCGACGTGGAA...CAGAGTTTTATATCCATTAAGTGCCTTTGAAAGTTTCCAGTTGTGTGGGCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp CTTCCACATGGTTATTTCAATGCAAGATCCGATCAGCATGAAGAGTCTAGTACACCTGTGGAGAGGTTCTaGACGATGCCAGCCGCTGCT +
Preference number: 4 (lower is better)
Translates to: LPHGYFNARSDQHEESSTPVERF*TMPAAA
Trigger: AGCAGCGGCTGGCATCGTTCAGAACCTCTCCACAGG...TGTACTAGACTCTTCATGCTGATCGGATCTTGCATTGAAATAACCATGTGGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp CTTCCACATGGTTATTTCAATGCAAGATCCGATCAGCATGAAGAGTCTAGTACAGCCATCGCCAGACAGTaGTGGTGTGCTCAGGGTCCA +
Preference number: 4 (lower is better)
Translates to: LPHGYFNARSDQHEESSTAIARQ*WCAQGP
Trigger: TGGACCCTGAGCACACCATCACTGTCTGGCGATGGC...TGTACTAGACTCTTCATGCTGATCGGATCTTGCATTGAAATAACCATGTGGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp TACAAGATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACAGGGGTTGTGTACATTGTaGACACGGGGCCTGTGTGAG +
Preference number: 4 (lower is better)
Translates to: YKIGRHGYHSASPVTWLQGLCTL*TRGLCE
Trigger: CTCACACAGGCCCCGTGTTCACAATGTACACAACCC...CTGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATCTTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp TACAAGATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACAGCGTTGCTGGCAGAGATaGAGAGGTCCTTGGAAGGGT +
Preference number: 4 (lower is better)
Translates to: YKIGRHGYHSASPVTWLQRCWQR*RGPWKG
Trigger: ACCCTTCCAAGGACCTCTTCATCTCTGCCAGCAACG...CTGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATCTTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp ATCACGGTTTTGGAGAGTCCAGATTATGGGAGCAGTTGTGTAACTTCTGCAGCGCGTCTCCTCCAGTGCTaGCCACATACTTGTCATCAT +
Preference number: 4 (lower is better)
Translates to: ITVLESPDYGSSCVTSAARLLQC*PHTCHH
Trigger: ATGATGACAAGTATGTGGTCAGCACTGGAGGAGACG...CGCTGCAGAAGTTACACAACTGCTCCCATAATCTGGACTCTCCAAAACCGTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp GTACAAGATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACAACTTCTGCAGCGTTTTaGGCTTGTGCATCCGGGGCA +
Preference number: 4 (lower is better)
Translates to: VQDRQTWLSLCITSHMVTTSAAF*ACASGA
Trigger: TGCCCCGGATGCACAAGCTCAAAACGCTGCAGAAGT...TGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATCTTGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp AATTTTCGTTCACTGACCAGAAGGACTAATAGGCGTCTATGTGCTCAGAACCACGAAATTGGTGGGAGGTaGGACAGCAGCCCACACAAC +
Preference number: 4 (lower is better)
Translates to: NFRSLTRRTNRRLCAQNHEIGGR*DSSPHN
Trigger: GTTGTGTGGGCTGCTGTCTCACCTCCCACCAATTTC...GTGGTTCTGAGCACATAGACGCCTATTAGTCCTTCTGGTCAGTGAACGAAAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp TACAAGATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACAGTGTAGTACAGGTTGTTaGGGCACTGGTGACCCCGGT +
Preference number: 4 (lower is better)
Translates to: YKIGRHGYHSASPVTWLQCSTGC*GTGDPG
Trigger: ACCGGGGTCACCAGTGCCGCAACAACCTGTACTACA...CTGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATCTTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp ACGGTTTTGGAGAGTCCAGATTATGGGAGCAGTTGTGTAACTTCTGCAGCGTTTCCCGACTTGGCCAGTTaGAACGAGAGTTTTGTCTGG +
Preference number: 4 (lower is better)
Translates to: TVLESPDYGSSCVTSAAFPDLAS*NESFVW
Trigger: CCAGACAAAACTCTCGTTGCAACTGGCCAAGTCGGG...AAACGCTGCAGAAGTTACACAACTGCTCCCATAATCTGGACTCTCCAAAACCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp CTTCCACATGGTTATTTCAATGCAAGATCCGATCAGCATGAAGAGTCTAGTACACAGAGCGGTCATCGCTaGCTGTCACAGCCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: LPHGYFNARSDQHEESSTQSGHR*LSQPEA
Trigger: AGCCTCTGGCTGTGACAGGCAGCGATGACCGCTCTG...TGTACTAGACTCTTCATGCTGATCGGATCTTGCATTGAAATAACCATGTGGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp AATTTTCGTTCACTGACCAGAAGGACTAATAGGCGTCTATGTGCTCAGAACCACAGAATGTCGTCATCGTaGCCCAGGTACAGCCTCTGG +
Preference number: 4 (lower is better)
Translates to: NFRSLTRRTNRRLCAQNHRMSSS*PRYSLW
Trigger: CCAGAGGCTGTACCTGGGGCACGATGACGACATTCT...GTGGTTCTGAGCACATAGACGCCTATTAGTCCTTCTGGTCAGTGAACGAAAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp ACGGTTTTGGAGAGTCCAGATTATGGGAGCAGTTGTGTAACTTCTGCAGCGTTTTTTGAGTTTCCGTACTaGCAGCATACGGTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: TVLESPDYGSSCVTSAAFFEFPY*QHTVLG
Trigger: GCCCAGCACCGTATGCTGGCAGTACGGAAACTCAAA...AAACGCTGCAGAAGTTACACAACTGCTCCCATAATCTGGACTCTCCAAAACCGT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp AGCCCACACAACTGGAAACTTTCAAAGGCACTTAATGGATATAAAACTCTGCAACTCAGGCTGGGGAGCTaGTCGGCTAACGGGTGGTCT +
Preference number: 4 (lower is better)
Translates to: SPHNWKLSKALNGYKTLQLRLGS*SANGWS
Trigger: AGACCACCCGTTAGCCGAGCAGCTCCCCAGCCTGAG...TTGCAGAGTTTTATATCCATTAAGTGCCTTTGAAAGTTTCCAGTTGTGTGGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp GATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACAGAAAACAGAGGTTCTGAACGATaGCAGCCGCTGCTGTGTGGA +
Preference number: 4 (lower is better)
Translates to: DRQTWLSLCITSHMVTENRGSER*QPLLCG
Trigger: TCCACACAGCAGCGGCTGGCATCGTTCAGAACCTCT...GTTTTCTGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp TACAAGATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACAGAGAGGTTCTGAACGATaGCAGCCGCTGCTGTGTGGA +
Preference number: 4 (lower is better)
Translates to: YKIGRHGYHSASPVTWLQRGSER*QPLLCG
Trigger: TCCACACAGCAGCGGCTGGCATCGTTCAGAACCTCT...CTGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATCTTGTA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp GATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACAGAAAACCCGACAGATACAAACTaGGTGTCTGAGTCGGGGCGA +
Preference number: 4 (lower is better)
Translates to: DRQTWLSLCITSHMVTENPTDTN*VSESGR
Trigger: TCGCCCCGACTCAGACACGCAGTTTGTATCTGTCGG...GTTTTCTGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp TACAAGATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACAGTGTAAAGCAAGGCGCTaGCTGCCAGGGTCCAGAACT +
Preference number: 4 (lower is better)
Translates to: YKIGRHGYHSASPVTWLQCKARR*LPGSRT
Trigger: AGTTCTGGACCCTGGCAGGCAGCGCCTTGCTTTACA...CTGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATCTTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp TGTCCAAGTCATATTCCGTCATACAACCAACTCCAAGGAACTCTAACTCACTTTCCCAGATCCGGGCTGTaGCATCGTTGCTGGCAGAGA +
Preference number: 4 (lower is better)
Translates to: CPSHIPSYNQLQGTLTHFPRSGL*HRCWQR
Trigger: TCTCTGCCAGCAACGATGGCACAGCCCGGATCTGGG...AAAGTGAGTTAGAGTTCCTTGGAGTTGGTTGTATGACGGAATATGACTTGGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp TTGTGTGCAGGGGAAGACAGGGTACCTTTATTTTCTCAGAAACTCTTCAATCAACCCAGATCCGGGCTGTaGCATCGTTGCTGGCAGAGA +
Preference number: 4 (lower is better)
Translates to: LCAGEDRVPLFSQKLFNQPRSGL*HRCWQR
Trigger: TCTCTGCCAGCAACGATGGCACAGCCCGGATCTGGG...TTGATTGAAGAGTTTCTGAGAAAATAAAGGTACCCTGTCTTCCCCTGCACACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR GCA 90 bp GTAACCGAGGCTTCAAAATTCGTCAGCGGGCTACATTATCAGATAGGATTTCTTCCTCAGCATGGCCTCTaGAGTTGCTGGCTGGTAGCA +
Preference number: 4 (lower is better)
Translates to: VTEASKFVSGLHYQIGFLPQHGL*SCWLVA
Trigger: TGCTACCAGCCAGCAACTGCAGAGGCCATGCTGAGG...AAGAAATCCTATCTGATAATGTAGCCCGCTGACGAATTTTGAAGCCTCGGTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp ACTTGTCATCATAAGAGAAACGGATGTTCGTCACGTGAGCCGAGTGACCGAAGTAGGAAGCTTTGTCAATaGTTCCCGCACACTCTCCGT +
Preference number: 4 (lower is better)
Translates to: TCHHKRNGCSSREPSDRSRKLCQ*FPHTLR
Trigger: ACGGAGAGTGTGCGGGAAGCATTGACAAAGCTTCCT...ACTTCGGTCACTCGGCTCACGTGACGAACATCCGTTTCTCTTATGATGACAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR CCA 90 bp ACGGTTTTGGAGAGTCCAGATTATGGGAGCAGTTGTGTAACTTCTGCAGCGTTTTGTCAGAATGGCCGGTaGCTGACGCCAGAAGTTTTC +
Preference number: 4 (lower is better)
Translates to: TVLESPDYGSSCVTSAAFCQNGR*LTPEVF
Trigger: GAAAACTTCTGGCGTCAGCCACCGGCCATTCTGACA...AAACGCTGCAGAAGTTACACAACTGCTCCCATAATCTGGACTCTCCAAAACCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp GACCCTTCGCGGTTGTGGATTCTGCGTGAACACTTAGTACTGGATGTTCACCAAAGCATAGACATCTACTaGGCCATCATTGGATCCCAC +
Preference number: 4 (lower is better)
Translates to: DPSRLWILREHLVLDVHQSIDIY*AIIGSH
Trigger: GTGGGATCCAATGATGGCCCAGTAGATGTCTATGCT...TTGGTGAACATCCAGTACTAAGTGTTCACGCAGAATCCACAACCGCGAAGGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR CCA 90 bp AATGAAGTCACCTCAACTCCACTCAGGGTGGTACACCAAGGTGCAGCCTTGGGTACCAGTTTGTCAACATaGTGTGGGTTACACTTTACC +
Preference number: 4 (lower is better)
Translates to: NEVTSTPLRVVHQGAALGTSLST*CGLHFT
Trigger: GGTAAAGTGTAACCCACACCATGTTGACAAACTGGT...ACCCAAGGCTGCACCTTGGTGTACCACCCTGAGTGGAGTTGAGGTGACTTCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp AATGAAGTCACCTCAACTCCACTCAGGGTGGTACACCAAGGTGCAGCCTTGGGTTCACAGCATAAATCTTaGTGGTGTAGTCAATGGCCT +
Preference number: 4 (lower is better)
Translates to: NEVTSTPLRVVHQGAALGSQHKS*WCSQWP
Trigger: AGGCCATTGACTACACCACCAAGATTTATGCTGTGA...ACCCAAGGCTGCACCTTGGTGTACCACCCTGAGTGGAGTTGAGGTGACTTCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp GTACAAGATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACAACTTCCTTCAGCTGCTaGTGTGGCTTGGTGCCTTCC +
Preference number: 4 (lower is better)
Translates to: VQDRQTWLSLCITSHMVTTSFSC*CGLVPS
Trigger: GGAAGGCACCAAGCCACACCAGCAGCTGAAGGAAGT...TGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATCTTGTAC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp GATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACAGAAAACGGTGTTGTCCCTATCTaGCTGGTGGCCACCACGTTT +
Preference number: 4 (lower is better)
Translates to: DRQTWLSLCITSHMVTENGVVPI*LVATTF
Trigger: AAACGTGGTGGCCACCAGCCAGATAGGGACAACACC...GTTTTCTGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp TGCTGCTCACCTTCCCATAAGCAGGTAACCGATGTCTTTCATTTAGGAAGCCTTTGTAATTCACCCCCTTaGAGTGGAAGCACCGCAGCA +
Preference number: 4 (lower is better)
Translates to: CCSPSHKQVTDVFHLGSLCNSPP*SGSTAA
Trigger: TGCTGCGGTGCTTCCACTCCAAGGGGGTGAATTACA...AAGGCTTCCTAAATGAAAGACATCGGTTACCTGCTTATGGGAAGGTGAGCAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp GTACAAGATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACAATGTTCAGGCCAGCGTaGGTCACACATGCGCAGTTG +
Preference number: 4 (lower is better)
Translates to: VQDRQTWLSLCITSHMVTMFRPA*VTHAQL
Trigger: CAACTGCGCATGTGTGACCCACGCTGGCCTGAACAT...TGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATCTTGTAC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp GCAGCCCACACAACTGGAAACTTTCAAAGGCACTTAATGGATATAAAACTCTGCTTTCCCAACGGCTGGTaGCAAGGAGGCACCTCAGCA +
Preference number: 4 (lower is better)
Translates to: AAHTTGNFQRHLMDIKLCFPNGW*QGGTSA
Trigger: TGCTGAGGTGCCTCCTTGCCACCAGCCGTTGGGAAA...GCAGAGTTTTATATCCATTAAGTGCCTTTGAAAGTTTCCAGTTGTGTGGGCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp GCAGCCCACACAACTGGAAACTTTCAAAGGCACTTAATGGATATAAAACTCTGCGCATTTCCCAACGGCTaGTGGCAAGGAGGCACCTCA +
Preference number: 4 (lower is better)
Translates to: AAHTTGNFQRHLMDIKLCAFPNG*WQGGTS
Trigger: TGAGGTGCCTCCTTGCCACCAGCCGTTGGGAAATGC...GCAGAGTTTTATATCCATTAAGTGCCTTTGAAAGTTTCCAGTTGTGTGGGCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp ATCACGGTTTTGGAGAGTCCAGATTATGGGAGCAGTTGTGTAACTTCTGCAGCGCTTGACCTTCCTTCGTaGCATCACGGTTTTGGAGAG +
Preference number: 4 (lower is better)
Translates to: ITVLESPDYGSSCVTSAALDLPS*HHGFGE
Trigger: CTCTCCAAAACCGTGATGCCACGAAGGAAGGTCAAG...CGCTGCAGAAGTTACACAACTGCTCCCATAATCTGGACTCTCCAAAACCGTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp ACTTGTCATCATAAGAGAAACGGATGTTCGTCACGTGAGCCGAGTGACCGAAGTGGAGAAAGGAGAAATTaGTGGGAGGTGAGACAGCAG +
Preference number: 4 (lower is better)
Translates to: TCHHKRNGCSSREPSDRSGERRN*WEVRQQ
Trigger: CTGCTGTCTCACCTCCCACCAATTTCTCCTTTCTCC...ACTTCGGTCACTCGGCTCACGTGACGAACATCCGTTTCTCTTATGATGACAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR CCA 90 bp TCTGGCTCCCTGTGGAGAGGTTCTGAACGATGCCAGCCGCTGCTGTGTGGAAGACTATTTTGGATTTTGTaGGTTTGGCATGAAACACAA +
Preference number: 4 (lower is better)
Translates to: SGSLWRGSERCQPLLCGRLFWIL*VWHETQ
Trigger: TTGTGTTTCATGCCAAACCCACAAAATCCAAAATAG...TCTTCCACACAGCAGCGGCTGGCATCGTTCAGAACCTCTCCACAGGGAGCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR CCA 90 bp TACAAGATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACAGCAACTCCACTCAGGGTaGTACACCAAGGTGCAGCCT +
Preference number: 4 (lower is better)
Translates to: YKIGRHGYHSASPVTWLQQLHSG*YTKVQP
Trigger: AGGCTGCACCTTGGTGTACCACCCTGAGTGGAGTTG...CTGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATCTTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp CAACAGTGTCAGCATTTACCACCAGGAAACTCCCATCGTTCAAGCCAACCGCTAACTCAGGAGGCAAGGTaGAAGGATCACTTGAGCTTT +
Preference number: 4 (lower is better)
Translates to: QQCQHLPPGNSHRSSQPLTQEAR*KDHLSF
Trigger: AAAGCTCAAGTGATCCTTCCACCTTGCCTCCTGAGT...TAGCGGTTGGCTTGAACGATGGGAGTTTCCTGGTGGTAAATGCTGACACTGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673655.1
ENST00000674035.1
CDS-3UTR CCA 90 bp ACAGTGTCAGCATTTACCACCAGGAAACTCCCATCGTTCAAGCCAACCGCTAAGACTCAGGAGGCAAGGTaGAAGGATCACTTGAGCTTT +
Preference number: 4 (lower is better)
Translates to: TVSAFTTRKLPSFKPTAKTQEAR*KDHLSF
Trigger: AAAGCTCAAGTGATCCTTCCACCTTGCCTCCTGAGT...CTTAGCGGTTGGCTTGAACGATGGGAGTTTCCTGGTGGTAAATGCTGACACTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673655.1
ENST00000674035.1
CDS-3UTR CCA 90 bp AATTTTCGTTCACTGACCAGAAGGACTAATAGGCGTCTATGTGCTCAGAACCACGCAAAATCGGGAGACTaGGGGCATGCCAGTTCTCAC +
Preference number: 4 (lower is better)
Translates to: NFRSLTRRTNRRLCAQNHAKSGD*GHASSH
Trigger: GTGAGAACTGGCATGCCCCCAGTCTCCCGATTTTGC...GTGGTTCTGAGCACATAGACGCCTATTAGTCCTTCTGGTCAGTGAACGAAAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR TCA 90 bp GCAGCCCACACAACTGGAAACTTTCAAAGGCACTTAATGGATATAAAACTCTGCAGAATGGCCGGTGGCTaGCGCCAGAAGTTTTCCCTT +
Preference number: 4 (lower is better)
Translates to: AAHTTGNFQRHLMDIKLCRMAGG*RQKFSL
Trigger: AAGGGAAAACTTCTGGCGTCAGCCACCGGCCATTCT...GCAGAGTTTTATATCCATTAAGTGCCTTTGAAAGTTTCCAGTTGTGTGGGCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp GTACAAGATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACAACCAGCGGACATTTGTaGCATGTGCAGAATGGCCCA +
Preference number: 4 (lower is better)
Translates to: VQDRQTWLSLCITSHMVTTSGHL*HVQNGP
Trigger: TGGGCCATTCTGCACATGTCACAAATGTCCGCTGGT...TGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATCTTGTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp TACAAGATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACAGACCAGCGGACATTTGTaGCATGTGCAGAATGGCCCA +
Preference number: 4 (lower is better)
Translates to: YKIGRHGYHSASPVTWLQTSGHL*HVQNGP
Trigger: TGGGCCATTCTGCACATGTCACAAATGTCCGCTGGT...CTGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATCTTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp AATGAAGTCACCTCAACTCCACTCAGGGTGGTACACCAAGGTGCAGCCTTGGGTTATCTTCTCGATCTCTaGAGGTCTTATTATATGCCG +
Preference number: 4 (lower is better)
Translates to: NEVTSTPLRVVHQGAALGYLLDL*RSYYMP
Trigger: CGGCATATAATAAGACCTTCAGAGATCGAGAAGATA...ACCCAAGGCTGCACCTTGGTGTACCACCCTGAGTGGAGTTGAGGTGACTTCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp AATGAAGTCACCTCAACTCCACTCAGGGTGGTACACCAAGGTGCAGCCTTGGGTTCCCTTGACAGGATATaGAAAAAGCTTAACGAAACC +
Preference number: 4 (lower is better)
Translates to: NEVTSTPLRVVHQGAALGSLDRI*KKLNET
Trigger: GGTTTCGTTAAGCTTTTTTCATATCCTGTCAAGGGA...ACCCAAGGCTGCACCTTGGTGTACCACCCTGAGTGGAGTTGAGGTGACTTCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp TACAAGATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACAGGCCCCACATACTTCTTaGATCTTGCGTGCTGTCCCT +
Preference number: 4 (lower is better)
Translates to: YKIGRHGYHSASPVTWLQAPHTS*ILRAVP
Trigger: AGGGACAGCACGCAAGATTCAAGAAGTATGTGGGGC...CTGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATCTTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp AGCCCACACAACTGGAAACTTTCAAAGGCACTTAATGGATATAAAACTCTGCAATTCCACGTCGGTGTCTaGCTCCTCGCTGTCCACCAG +
Preference number: 4 (lower is better)
Translates to: SPHNWKLSKALNGYKTLQFHVGV*LLAVHQ
Trigger: CTGGTGGACAGCGAGGAGTCAGACACCGACGTGGAA...TTGCAGAGTTTTATATCCATTAAGTGCCTTTGAAAGTTTCCAGTTGTGTGGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp GATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACAGAAAACTACAAACTGCGTGTCTaGGTCGGGGCGAAATTCCAC +
Preference number: 4 (lower is better)
Translates to: DRQTWLSLCITSHMVTENYKLRV*VGAKFH
Trigger: GTGGAATTTCGCCCCGACTCAGACACGCAGTTTGTA...GTTTTCTGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp AGCAGCCCACACAACTGGAAACTTTCAAAGGCACTTAATGGATATAAAACTCTGTTCCGCCGGTCACTATaGGTCCATCCCGAAGGGTTG +
Preference number: 4 (lower is better)
Translates to: SSPHNWKLSKALNGYKTLFRRSL*VHPEGL
Trigger: CAACCCTTCGGGATGGACTCATAGTGACCGGCGGAA...CAGAGTTTTATATCCATTAAGTGCCTTTGAAAGTTTCCAGTTGTGTGGGCTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp TGTCCAAGTCATATTCCGTCATACAACCAACTCCAAGGAACTCTAACTCACTTTGCAAGCCAGGGGCTATaGGGAGAGCAAGAGGACACT +
Preference number: 4 (lower is better)
Translates to: CPSHIPSYNQLQGTLTHFASQGL*GEQEDT
Trigger: AGTGTCCTCTTGCTCTCCTCATAGCCCCTGGCTTGC...AAAGTGAGTTAGAGTTCCTTGGAGTTGGTTGTATGACGGAATATGACTTGGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR GCA 90 bp GATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACAGAAAACCTAGTGAACCTCAGCTaGCGGTTACTAGGCGAGATC +
Preference number: 4 (lower is better)
Translates to: DRQTWLSLCITSHMVTENLVNLS*RLLGEI
Trigger: GATCTCGCCTAGTAACCGGCAGCTGAGGTTCACTAG...GTTTTCTGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356458.7
ENST00000673912.1
CDS-3UTR GCA 90 bp AGCATATGTTTACAGCTGTATTGCTTCAAAACTGAAGATGAGAGGAGCAAGGGGTGTAGTACAGGTTGTTaGGGCACTGGTGACCCCGGT +
Preference number: 4 (lower is better)
Translates to: SICLQLYCFKTEDERSKGCSTGC*GTGDPG
Trigger: ACCGGGGTCACCAGTGCCGCAACAACCTGTACTACA...CCCCTTGCTCCTCTCATCTTCAGTTTTGAAGCAATACAGCTGTAAACATATGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR GCA 90 bp GTACAAGATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACAGACCACCTCCTTGCCTaGCGTGTAGTACAGGTTGTT +
Preference number: 4 (lower is better)
Translates to: VQDRQTWLSLCITSHMVTDHLLA*RVVQVV
Trigger: AACAACCTGTACTACACGGCAGGCAAGGAGGTGGTC...TGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATCTTGTAC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp GATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACAGAAAACCCCGACTTGGCCAGTTaGAACGAGAGTTTTGTCTGG +
Preference number: 4 (lower is better)
Translates to: DRQTWLSLCITSHMVTENPDLAS*NESFVW
Trigger: CCAGACAAAACTCTCGTTGCAACTGGCCAAGTCGGG...GTTTTCTGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp TACAAGATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACAGGATCAGCCCCTCCTGTaGTCAACACCCACTGAAAGT +
Preference number: 4 (lower is better)
Translates to: YKIGRHGYHSASPVTWLQDQPLL*STPTES
Trigger: ACTTTCAGTGGGTGTTGAGCACAGGAGGGGCTGATC...CTGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATCTTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp GATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACAGAAAACGATCAGCCCCTCCTGTaGTCAACACCCACTGAAAGT +
Preference number: 4 (lower is better)
Translates to: DRQTWLSLCITSHMVTENDQPLL*STPTES
Trigger: ACTTTCAGTGGGTGTTGAGCACAGGAGGGGCTGATC...GTTTTCTGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp GATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACAGAAAACTCCACCTTCTTGGGGTaGAGTTTCCAGCATGCCGTT +
Preference number: 4 (lower is better)
Translates to: DRQTWLSLCITSHMVTENSTFLG*SFQHAV
Trigger: AACGGCATGCTGGAAACTGCACCCCAAGAAGGTGGA...GTTTTCTGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp AATTTTCGTTCACTGACCAGAAGGACTAATAGGCGTCTATGTGCTCAGAACCACTACAGCCTCTGGGAGTaGTGCTGCCGATTATACACG +
Preference number: 4 (lower is better)
Translates to: NFRSLTRRTNRRLCAQNHYSLWE*CCRLYT
Trigger: CGTGTATAATCGGCAGCAGCACTCCCAGAGGCTGTA...GTGGTTCTGAGCACATAGACGCCTATTAGTCCTTCTGGTCAGTGAACGAAAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp AGCCCACACAACTGGAAACTTTCAAAGGCACTTAATGGATATAAAACTCTGCAACAGGAGAGGGTGAGCTaGCAACCCCCACACTTCTCC +
Preference number: 4 (lower is better)
Translates to: SPHNWKLSKALNGYKTLQQERVS*QPPHFS
Trigger: GGAGAAGTGTGGGGGTTGGCAGCTCACCCTCTCCTG...TTGCAGAGTTTTATATCCATTAAGTGCCTTTGAAAGTTTCCAGTTGTGTGGGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp GTACAAGATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACAATCATCGCTCACTGTTaGACAGATGGGCAGGAGAGG +
Preference number: 4 (lower is better)
Translates to: VQDRQTWLSLCITSHMVTIIAHC*TDGQER
Trigger: CCTCTCCTGCCCATCTGTGCAACAGTGAGCGATGAT...TGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATCTTGTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp TACAAGATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACAGTTTGAGTTTCCGTACTaGCAGCATACGGTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: YKIGRHGYHSASPVTWLQFEFPY*QHTVLG
Trigger: GCCCAGCACCGTATGCTGGCAGTACGGAAACTCAAA...CTGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATCTTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp ATCATAAGAGAAACGGATGTTCGTCACGTGAGCCGAGTGACCGAAGTATCGCTTCACGTTAGTGACATGTaGACTGTGCCCCACATACTT +
Preference number: 4 (lower is better)
Translates to: IIRETDVRHVSRVTEVSLHVSDM*TVPHIL
Trigger: AAGTATGTGGGGCACAGTGCACATGTCACTAACGTG...AAGCGATACTTCGGTCACTCGGCTCACGTGACGAACATCCGTTTCTCTTATGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR GCA 90 bp ACGGTTTTGGAGAGTCCAGATTATGGGAGCAGTTGTGTAACTTCTGCAGCGTTTAGCACAGAGTCATTGTaGAGCCACCTCACGTTAGTG +
Preference number: 4 (lower is better)
Translates to: TVLESPDYGSSCVTSAAFSTESL*SHLTLV
Trigger: CACTAACGTGAGGTGGCTGCACAATGACTCTGTGCT...AAACGCTGCAGAAGTTACACAACTGCTCCCATAATCTGGACTCTCCAAAACCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp GATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACAGAAAACGAAACTTCCTTCAGCTaGTGGTGTGGCTTGGTGCCT +
Preference number: 4 (lower is better)
Translates to: DRQTWLSLCITSHMVTENETSFS*WCGLVP
Trigger: AGGCACCAAGCCACACCAGCAGCTGAAGGAAGTTTC...GTTTTCTGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp AATGAAGTCACCTCAACTCCACTCAGGGTGGTACACCAAGGTGCAGCCTTGGGTCAGGAGCTTTCCAGTTaGACTGAAGTTGATGTAATT +
Preference number: 4 (lower is better)
Translates to: NEVTSTPLRVVHQGAALGQELSS*TEVDVI
Trigger: AATTACATCAACTTCAGTGCAACTGGAAAGCTCCTG...ACCCAAGGCTGCACCTTGGTGTACCACCCTGAGTGGAGTTGAGGTGACTTCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp TGTCCAAGTCATATTCCGTCATACAACCAACTCCAAGGAACTCTAACTCACTTTCAGACAGTGATGGTGTaGTCAGGGTCCACTCCCACC +
Preference number: 4 (lower is better)
Translates to: CPSHIPSYNQLQGTLTHFQTVMV*SGSTPT
Trigger: GGTGGGAGTGGACCCTGAGCACACCATCACTGTCTG...AAAGTGAGTTAGAGTTCCTTGGAGTTGGTTGTATGACGGAATATGACTTGGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp GCAGCCCACACAACTGGAAACTTTCAAAGGCACTTAATGGATATAAAACTCTGCACCTTGGCACCTTCCTaGCATCGCCAGACAGTGATG +
Preference number: 4 (lower is better)
Translates to: AAHTTGNFQRHLMDIKLCTLAPS*HRQTVM
Trigger: CATCACTGTCTGGCGATGGCAGGAAGGTGCCAAGGT...GCAGAGTTTTATATCCATTAAGTGCCTTTGAAAGTTTCCAGTTGTGTGGGCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp GTAACCGAGGCTTCAAAATTCGTCAGCGGGCTACATTATCAGATAGGATTTCTTCCGACAGATACAAACTaGGTGTCTGAGTCGGGGCGA +
Preference number: 4 (lower is better)
Translates to: VTEASKFVSGLHYQIGFLPTDTN*VSESGR
Trigger: TCGCCCCGACTCAGACACGCAGTTTGTATCTGTCGG...AAGAAATCCTATCTGATAATGTAGCCCGCTGACGAATTTTGAAGCCTCGGTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp TGTCCAAGTCATATTCCGTCATACAACCAACTCCAAGGAACTCTAACTCACTTTACGGCTTCAGTTACCTaGTTCCCCAGGGGGACCTCA +
Preference number: 4 (lower is better)
Translates to: CPSHIPSYNQLQGTLTHFTASVT*FPRGTS
Trigger: TGAGGTCCCCCTGGGGAAGCAGGTAACTGAAGCCGT...AAAGTGAGTTAGAGTTCCTTGGAGTTGGTTGTATGACGGAATATGACTTGGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp TACAAGATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACAGAGCGTGGGTCACACATaGGCAGTTGACATCAGCCTT +
Preference number: 4 (lower is better)
Translates to: YKIGRHGYHSASPVTWLQSVGHT*AVDISL
Trigger: AAGGCTGATGTCAACTGCGCATGTGTGACCCACGCT...CTGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATCTTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp CTTCCACATGGTTATTTCAATGCAAGATCCGATCAGCATGAAGAGTCTAGTACACCTCAGCATGGCCTCTaGAGTTGCTGGCTGGTAGCA +
Preference number: 4 (lower is better)
Translates to: LPHGYFNARSDQHEESSTPQHGL*SCWLVA
Trigger: TGCTACCAGCCAGCAACTGCAGAGGCCATGCTGAGG...TGTACTAGACTCTTCATGCTGATCGGATCTTGCATTGAAATAACCATGTGGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp GTACAAGATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACAAGCGTTTTGAGCTTGTaGATCCGGGGCAGCATGGTA +
Preference number: 4 (lower is better)
Translates to: VQDRQTWLSLCITSHMVTSVLSL*IRGSMV
Trigger: TACCATGCTGCCCCGGATGCACAAGCTCAAAACGCT...TGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATCTTGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp TTTCGTTCACTGACCAGAAGGACTAATAGGCGTCTATGTGCTCAGAACCACCAGAAACAGAATTGGGACTaGATAGGGACTCTACTGCGG +
Preference number: 4 (lower is better)
Translates to: FRSLTRRTNRRLCAQNHQKQNWD*IGTLLR
Trigger: CCGCAGTAGAGTCCCTATGCAGTCCCAATTCTGTTT...CTGGTGGTTCTGAGCACATAGACGCCTATTAGTCCTTCTGGTCAGTGAACGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp ACCAGGAAACTCCCATCGTTCAAGCCAACCGCTAAGGCTTTCCCATCAGGGGAACCTCATTCTTTTAGTTaGTCCAATTCTCTGATCCAC +
Preference number: 4 (lower is better)
Translates to: TRKLPSFKPTAKAFPSGEPHSFS*SNSLIH
Trigger: GTGGATCAGAGAATTGGAGCAACTAAAAGAATGAGG...TTCCCCTGATGGGAAAGCCTTAGCGGTTGGCTTGAACGATGGGAGTTTCCTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673746.1
CDS-3UTR GCA 90 bp GTACAAGATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACAGGGAGACTGGGGGCATaGCAGTTCTCACAATTAGAC +
Preference number: 4 (lower is better)
Translates to: VQDRQTWLSLCITSHMVTGRLGA*QFSQLD
Trigger: GTCTAATTGTGAGAACTGGCATGCCCCCAGTCTCCC...TGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATCTTGTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR CCA 90 bp GTACAAGATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACAAAAATCCTGTCAGAATaGCCGGTGGCTGACGCCAGA +
Preference number: 4 (lower is better)
Translates to: VQDRQTWLSLCITSHMVTKILSE*PVADAR
Trigger: TCTGGCGTCAGCCACCGGCCATTCTGACAGGATTTT...TGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATCTTGTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp AAAAGGAAGCTTTGTCAATGCTTCCCGCACACTCTCCGTGACTTTACGAATGCGGCTAACCACTCTGTTTaGCTGATATGGATCCCAGGA +
Preference number: 4 (lower is better)
Translates to: KRKLCQCFPHTLRDFTNAANHSV*LIWIPG
Trigger: TCCTGGGATCCATATCAGCCAAACAGAGTGGTTAGC...CGCATTCGTAAAGTCACGGAGAGTGTGCGGGAAGCATTGACAAAGCTTCCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR CCA 90 bp CCAACTCCAAGGAACTCTAACTCACTTTATAATTTTGATTTACCAGCTATTCCTCAGCCAGAGGCTTCTTaGGGTGCAGGGCCAGAGCCC +
Preference number: 4 (lower is better)
Translates to: PTPRNSNSLYNFDLPAIPQPEAS*GAGPEP
Trigger: GGGCTCTGGCCCTGCACCCCAAGAAGCCTCTGGCTG...AGGAATAGCTGGTAAATCAAAATTATAAAGTGAGTTAGAGTTCCTTGGAGTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp GTACAAGATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACATCAGCTCCACCTTCTTaGGGTGCAGTTTCCAGCATG +
Preference number: 4 (lower is better)
Translates to: VQDRQTWLSLCITSHMVTSAPPS*GAVSSM
Trigger: CATGCTGGAAACTGCACCCCAAGAAGGTGGAGCTGA...TGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATCTTGTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp TACAAGATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACAGTCAGCTCCACCTTCTTaGGGTGCAGTTTCCAGCATG +
Preference number: 4 (lower is better)
Translates to: YKIGRHGYHSASPVTWLQSAPPS*GAVSSM
Trigger: CATGCTGGAAACTGCACCCCAAGAAGGTGGAGCTGA...CTGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATCTTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp CTTCCACATGGTTATTTCAATGCAAGATCCGATCAGCATGAAGAGTCTAGTACACCCAGGTACAGCCTCTaGGAGTGCTGCTGCCGATTA +
Preference number: 4 (lower is better)
Translates to: LPHGYFNARSDQHEESSTPRYSL*ECCCRL
Trigger: TAATCGGCAGCAGCACTCCCAGAGGCTGTACCTGGG...TGTACTAGACTCTTCATGCTGATCGGATCTTGCATTGAAATAACCATGTGGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp AGCAGCCCACACAACTGGAAACTTTCAAAGGCACTTAATGGATATAAAACTCTGCCCAGGTACAGCCTCTaGGAGTGCTGCTGCCGATTA +
Preference number: 4 (lower is better)
Translates to: SSPHNWKLSKALNGYKTLPRYSL*ECCCRL
Trigger: TAATCGGCAGCAGCACTCCCAGAGGCTGTACCTGGG...CAGAGTTTTATATCCATTAAGTGCCTTTGAAAGTTTCCAGTTGTGTGGGCTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp GCAGCCCACACAACTGGAAACTTTCAAAGGCACTTAATGGATATAAAACTCTGCGCCAGCATACGGTGCTaGGCAGATAGTTCCCAGATG +
Preference number: 4 (lower is better)
Translates to: AAHTTGNFQRHLMDIKLCASIRC*ADSSQM
Trigger: CATCTGGGAACTATCTGCCCAGCACCGTATGCTGGC...GCAGAGTTTTATATCCATTAAGTGCCTTTGAAAGTTTCCAGTTGTGTGGGCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp AAAAGGAAGCTTTGTCAATGCTTCCCGCACACTCTCCGTGACTTTACGAATGCGTATATCGCTATGTGCTaGCCAGATTCCCTCACAGGT +
Preference number: 4 (lower is better)
Translates to: KRKLCQCFPHTLRDFTNAYIAMC*PDSLTG
Trigger: ACCTGTGAGGGAATCTGGCCAGCACATAGCGATATA...CGCATTCGTAAAGTCACGGAGAGTGTGCGGGAAGCATTGACAAAGCTTCCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR CCA 90 bp GCAGCCCACACAACTGGAAACTTTCAAAGGCACTTAATGGATATAAAACTCTGCTCCCCACAAACTCCCTaGTCCAGATCATCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: AAHTTGNFQRHLMDIKLCSPQTP*SRSSGL
Trigger: CAGCCCTGATGATCTGGACCAGGGAGTTTGTGGGGA...GCAGAGTTTTATATCCATTAAGTGCCTTTGAAAGTTTCCAGTTGTGTGGGCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp TGTCCAAGTCATATTCCGTCATACAACCAACTCCAAGGAACTCTAACTCACTTTACCAGCTTGCTCTCCTaGGTCCCCACAAACTCCCTG +
Preference number: 4 (lower is better)
Translates to: CPSHIPSYNQLQGTLTHFTSLLS*VPTNSL
Trigger: CAGGGAGTTTGTGGGGACCCAGGAGAGCAAGCTGGT...AAAGTGAGTTAGAGTTCCTTGGAGTTGGTTGTATGACGGAATATGACTTGGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp GTACAAGATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACACTTCAGCTGCTGGTGTaGCTTGGTGCCTTCCATTTC +
Preference number: 4 (lower is better)
Translates to: VQDRQTWLSLCITSHMVTLQLLV*LGAFHF
Trigger: GAAATGGAAGGCACCAAGCCACACCAGCAGCTGAAG...TGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATCTTGTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp CTTCCACATGGTTATTTCAATGCAAGATCCGATCAGCATGAAGAGTCTAGTACATGCAGTTTCTCAGGCTaGGGAGCTGCTCGGCTAACG +
Preference number: 4 (lower is better)
Translates to: LPHGYFNARSDQHEESSTCSFSG*GAARLT
Trigger: CGTTAGCCGAGCAGCTCCCCAGCCTGAGAAACTGCA...TGTACTAGACTCTTCATGCTGATCGGATCTTGCATTGAAATAACCATGTGGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp TGTCCAAGTCATATTCCGTCATACAACCAACTCCAAGGAACTCTAACTCACTTTCCAGCCGCTGCTGTGTaGAAGATGATGTCAGCGCCA +
Preference number: 4 (lower is better)
Translates to: CPSHIPSYNQLQGTLTHFPAAAV*KMMSAP
Trigger: TGGCGCTGACATCATCTTCCACACAGCAGCGGCTGG...AAAGTGAGTTAGAGTTCCTTGGAGTTGGTTGTATGACGGAATATGACTTGGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp TACAAGATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACAGTCCCTATCTGGCTGGTaGCCACCACGTTTCTGTACT +
Preference number: 4 (lower is better)
Translates to: YKIGRHGYHSASPVTWLQSLSGW*PPRFCT
Trigger: AGTACAGAAACGTGGTGGCCACCAGCCAGATAGGGA...CTGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATCTTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp GATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACAGAAAACTTGTCCCTATCTGGCTaGTGGCCACCACGTTTCTGT +
Preference number: 4 (lower is better)
Translates to: DRQTWLSLCITSHMVTENLSLSG*WPPRFC
Trigger: ACAGAAACGTGGTGGCCACCAGCCAGATAGGGACAA...GTTTTCTGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp ACTTGTCATCATAAGAGAAACGGATGTTCGTCACGTGAGCCGAGTGACCGAAGTCGTCCCATATGTGGATaGAAGGTGTTGTCCCTATCT +
Preference number: 4 (lower is better)
Translates to: TCHHKRNGCSSREPSDRSRPICG*KVLSLS
Trigger: AGATAGGGACAACACCTTCCATCCACATATGGGACG...ACTTCGGTCACTCGGCTCACGTGACGAACATCCGTTTCTCTTATGATGACAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR CCA 90 bp TTGTGGCAAATTCAGCGGATTTTAAGTATTGACCCTTCGCGGTTGTGGATTCTGGGGTGTGTTTGGTCATaGCGTCCCATATGTGGATGG +
Preference number: 4 (lower is better)
Translates to: LWQIQRILSIDPSRLWILGCVWS*RPICGW
Trigger: CCATCCACATATGGGACGCCATGACCAAACACACCC...CAGAATCCACAACCGCGAAGGGTCAATACTTAAAATCCGCTGAATTTGCCACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR CCA 90 bp TTGTGGCAAATTCAGCGGATTTTAAGTATTGACCCTTCGCGGTTGTGGATTCTGTGTAATTCACCCCCTTaGAGTGGAAGCACCGCAGCA +
Preference number: 4 (lower is better)
Translates to: LWQIQRILSIDPSRLWILCNSPP*SGSTAA
Trigger: TGCTGCGGTGCTTCCACTCCAAGGGGGTGAATTACA...CAGAATCCACAACCGCGAAGGGTCAATACTTAAAATCCGCTGAATTTGCCACAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR CCA 90 bp AGCATATGTTTACAGCTGTATTGCTTCAAAACTGAAGATGAGAGGAGCAAGGGGATGTTCAGGCCAGCGTaGGTCACACATGCGCAGTTG +
Preference number: 4 (lower is better)
Translates to: SICLQLYCFKTEDERSKGMFRPA*VTHAQL
Trigger: CAACTGCGCATGTGTGACCCACGCTGGCCTGAACAT...CCCCTTGCTCCTCTCATCTTCAGTTTTGAAGCAATACAGCTGTAAACATATGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR CCA 90 bp ACGGTTTTGGAGAGTCCAGATTATGGGAGCAGTTGTGTAACTTCTGCAGCGTTTGGAGAAAGGAGAAATTaGTGGGAGGTGAGACAGCAG +
Preference number: 4 (lower is better)
Translates to: TVLESPDYGSSCVTSAAFGERRN*WEVRQQ
Trigger: CTGCTGTCTCACCTCCCACCAATTTCTCCTTTCTCC...AAACGCTGCAGAAGTTACACAACTGCTCCCATAATCTGGACTCTCCAAAACCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp AATGAAGTCACCTCAACTCCACTCAGGGTGGTACACCAAGGTGCAGCCTTGGGTACTGGAACTATGGCATaGCTCATAAGGCATTATTTG +
Preference number: 4 (lower is better)
Translates to: NEVTSTPLRVVHQGAALGTGTMA*LIRHYL
Trigger: CAAATAATGCCTTATGAGCCATGCCATAGTTCCAGT...ACCCAAGGCTGCACCTTGGTGTACCACCCTGAGTGGAGTTGAGGTGACTTCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR CCA 90 bp CTGCAGCGTTTTGAGCTTGTGCATCCGGGGCAGCATGGTAGGCATTTCCCAACGGGGAGTTATGTACAATaGATACTTTGTTTCCAAATC +
Preference number: 4 (lower is better)
Translates to: LQRFELVHPGQHGRHFPTGSYVQ*ILCFQI
Trigger: GATTTGGAAACAAAGTATCCATTGTACATAACTCCC...CGTTGGGAAATGCCTACCATGCTGCCCCGGATGCACAAGCTCAAAACGCTGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR TCA 90 bp ATCACGGTTTTGGAGAGTCCAGATTATGGGAGCAGTTGTGTAACTTCTGCAGCGACCACTCTGTTTGGCTaGTATGGATCCCAGGAAATA +
Preference number: 4 (lower is better)
Translates to: ITVLESPDYGSSCVTSAATTLFG*YGSQEI
Trigger: TATTTCCTGGGATCCATATCAGCCAAACAGAGTGGT...CGCTGCAGAAGTTACACAACTGCTCCCATAATCTGGACTCTCCAAAACCGTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp ACGGTTTTGGAGAGTCCAGATTATGGGAGCAGTTGTGTAACTTCTGCAGCGTTTGCACTATGTGCTCCTTaGATGGTGCGGACTAAATTG +
Preference number: 4 (lower is better)
Translates to: TVLESPDYGSSCVTSAAFALCAP*MVRTKL
Trigger: CAATTTAGTCCGCACCATTCAAGGAGCACATAGTGC...AAACGCTGCAGAAGTTACACAACTGCTCCCATAATCTGGACTCTCCAAAACCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp CCAACTCCAAGGAACTCTAACTCACTTTATAATTTTGATTTACCAGCTATTCCTATGCCCAGGGCCAGCTaGGATCCGTCGGGGCTGAAA +
Preference number: 4 (lower is better)
Translates to: PTPRNSNSLYNFDLPAIPMPRAS*DPSGLK
Trigger: TTTCAGCCCCGACGGATCTCAGCTGGCCCTGGGCAT...AGGAATAGCTGGTAAATCAAAATTATAAAGTGAGTTAGAGTTCCTTGGAGTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp ATCACGGTTTTGGAGAGTCCAGATTATGGGAGCAGTTGTGTAACTTCTGCAGCGGTAATTCGCATCCACTaGGTTGATGTCAGTAACCTC +
Preference number: 4 (lower is better)
Translates to: ITVLESPDYGSSCVTSAAVIRIH*VDVSNL
Trigger: GAGGTTACTGACATCAACTCAGTGGATGCGAATTAC...CGCTGCAGAAGTTACACAACTGCTCCCATAATCTGGACTCTCCAAAACCGTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp AATTTTCGTTCACTGACCAGAAGGACTAATAGGCGTCTATGTGCTCAGAACCACTCCAGACACCAGCACTaGGCTGTTGTAATTCGCATC +
Preference number: 4 (lower is better)
Translates to: NFRSLTRRTNRRLCAQNHSRHQH*AVVIRI
Trigger: GATGCGAATTACAACAGCTCAGTGCTGGTGTCTGGA...GTGGTTCTGAGCACATAGACGCCTATTAGTCCTTCTGGTCAGTGAACGAAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp AGCCCACACAACTGGAAACTTTCAAAGGCACTTAATGGATATAAAACTCTGCAAGTGCTCAACACCCACTaGAAGTCATGGGACCAGCGG +
Preference number: 4 (lower is better)
Translates to: SPHNWKLSKALNGYKTLQVLNTH*KSWDQR
Trigger: CCGCTGGTCCCATGACTTTCAGTGGGTGTTGAGCAC...TTGCAGAGTTTTATATCCATTAAGTGCCTTTGAAAGTTTCCAGTTGTGTGGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp TGTCCAAGTCATATTCCGTCATACAACCAACTCCAAGGAACTCTAACTCACTTTCACTGGAAAACTGAGTaGTCAGCCCCTCCTGTGCTC +
Preference number: 4 (lower is better)
Translates to: CPSHIPSYNQLQGTLTHFHWKTE*SAPPVL
Trigger: GAGCACAGGAGGGGCTGATCACTCAGTTTTCCAGTG...AAAGTGAGTTAGAGTTCCTTGGAGTTGGTTGTATGACGGAATATGACTTGGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp TTGTGTGCAGGGGAAGACAGGGTACCTTTATTTTCTCAGAAACTCTTCAATCAACACTGGAAAACTGAGTaGTCAGCCCCTCCTGTGCTC +
Preference number: 4 (lower is better)
Translates to: LCAGEDRVPLFSQKLFNQHWKTE*SAPPVL
Trigger: GAGCACAGGAGGGGCTGATCACTCAGTTTTCCAGTG...TTGATTGAAGAGTTTCTGAGAAAATAAAGGTACCCTGTCTTCCCCTGCACACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR TCA 90 bp TGTCCAAGTCATATTCCGTCATACAACCAACTCCAAGGAACTCTAACTCACTTTGAGCCTTTTCTCGTTTaGGGAAGGGCACTGCGTGGT +
Preference number: 4 (lower is better)
Translates to: CPSHIPSYNQLQGTLTHFEPFLV*GRALRG
Trigger: ACCACGCAGTGCCCTTCCTCAAACGAGAAAAGGCTC...AAAGTGAGTTAGAGTTCCTTGGAGTTGGTTGTATGACGGAATATGACTTGGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp GATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACAGAAAACGCACACACTCCTCTCTaGTGTTGTCCTTTCAACAGC +
Preference number: 4 (lower is better)
Translates to: DRQTWLSLCITSHMVTENAHTPL*CCPFNS
Trigger: GCTGTTGAAAGGACAACATCAGAGAGGAGTGTGTGC...GTTTTCTGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp AATTTTCGTTCACTGACCAGAAGGACTAATAGGCGTCTATGTGCTCAGAACCACGTCCATGTCCCAAAGTaGTGGCACGAATTGAAGGGT +
Preference number: 4 (lower is better)
Translates to: NFRSLTRRTNRRLCAQNHVHVPK*WHELKG
Trigger: ACCCTTCAATTCGTGCCATCACTTTGGGACATGGAC...GTGGTTCTGAGCACATAGACGCCTATTAGTCCTTCTGGTCAGTGAACGAAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp GGAAACTCCCATCGTTCAAGCCAACCGCTAAGGCTTTCCCATCAGGGGAAAAGGATCATTTCTTTTCTGTaGTGGAAAGAGACCATGTCT +
Preference number: 4 (lower is better)
Translates to: GNSHRSSQPLRLSHQGKRIISFL*WKETMS
Trigger: AGACATGGTCTCTTTCCATCACAGAAAAGAAATGAT...CCTTTTCCCCTGATGGGAAAGCCTTAGCGGTTGGCTTGAACGATGGGAGTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000673655.1
ENST00000673746.1
ENST00000673916.1
ENST00000674035.1
CDS-3UTR TCA 90 bp TGTCCAAGTCATATTCCGTCATACAACCAACTCCAAGGAACTCTAACTCACTTTGGGTTGTGTACATTGTaGACACGGGGCCTGTGTGAG +
Preference number: 4 (lower is better)
Translates to: CPSHIPSYNQLQGTLTHFGLCTL*TRGLCE
Trigger: CTCACACAGGCCCCGTGTTCACAATGTACACAACCC...AAAGTGAGTTAGAGTTCCTTGGAGTTGGTTGTATGACGGAATATGACTTGGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp TGCTGCTCACCTTCCCATAAGCAGGTAACCGATGTCTTTCATTTAGGAAGCCTTGATTTGTGCCCTGAGTaGGGTCATAGAAGTCAACTG +
Preference number: 4 (lower is better)
Translates to: CCSPSHKQVTDVFHLGSLDLCPE*GHRSQL
Trigger: CAGTTGACTTCTATGACCTCACTCAGGGCACAAATC...AAGGCTTCCTAAATGAAAGACATCGGTTACCTGCTTATGGGAAGGTGAGCAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp AATTTTCGTTCACTGACCAGAAGGACTAATAGGCGTCTATGTGCTCAGAACCACTCACACATGCGCAGTTaGCATCAGCCTTGTCTGCAT +
Preference number: 4 (lower is better)
Translates to: NFRSLTRRTNRRLCAQNHSHMRS*HQPCLH
Trigger: ATGCAGACAAGGCTGATGTCAACTGCGCATGTGTGA...GTGGTTCTGAGCACATAGACGCCTATTAGTCCTTCTGGTCAGTGAACGAAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp TACAAGATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACAGTCACACATGCGCAGTTaGCATCAGCCTTGTCTGCAT +
Preference number: 4 (lower is better)
Translates to: YKIGRHGYHSASPVTWLQSHMRS*HQPCLH
Trigger: ATGCAGACAAGGCTGATGTCAACTGCGCATGTGTGA...CTGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATCTTGTA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp TTGTGGCAAATTCAGCGGATTTTAAGTATTGACCCTTCGCGGTTGTGGATTCTGCAAAGTCATCTCCTGTaGCAATGTTCAGGCCAGCGT +
Preference number: 4 (lower is better)
Translates to: LWQIQRILSIDPSRLWILQSHLL*QCSGQR
Trigger: ACGCTGGCCTGAACATTGTCACAGGAGATGACTTTG...CAGAATCCACAACCGCGAAGGGTCAATACTTAAAATCCGCTGAATTTGCCACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR TCA 90 bp TGTCCAAGTCATATTCCGTCATACAACCAACTCCAAGGAACTCTAACTCACTTTACTTCTGCAGCGTTTTaGGCTTGTGCATCCGGGGCA +
Preference number: 4 (lower is better)
Translates to: CPSHIPSYNQLQGTLTHFTSAAF*ACASGA
Trigger: TGCCCCGGATGCACAAGCTCAAAACGCTGCAGAAGT...AAAGTGAGTTAGAGTTCCTTGGAGTTGGTTGTATGACGGAATATGACTTGGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp GTACAAGATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACAAGCCCTCCTCAGCTTTaGGGTTTTAGCACCATATGG +
Preference number: 4 (lower is better)
Translates to: VQDRQTWLSLCITSHMVTSPPQL*GFSTIW
Trigger: CCATATGGTGCTAAAACCTCAAAGCTGAGGAGGGCT...TGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATCTTGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp ACTTGTCATCATAAGAGAAACGGATGTTCGTCACGTGAGCCGAGTGACCGAAGTCCTGAAGCAATCAAATaGAGTCACCTCAACTCCACT +
Preference number: 4 (lower is better)
Translates to: TCHHKRNGCSSREPSDRSPEAIK*SHLNST
Trigger: AGTGGAGTTGAGGTGACTTCATTTGATTGCTTCAGG...ACTTCGGTCACTCGGCTCACGTGACGAACATCCGTTTCTCTTATGATGACAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR TCA 90 bp ACAGTGTCAGCATTTACCACCAGGAAACTCCCATCGTTCAAGCCAACCGCTAAGGTTGCTCCAATTCTCTaGTCCACGGATTGTAATGTA +
Preference number: 4 (lower is better)
Translates to: TVSAFTTRKLPSFKPTAKVAPIL*STDCNV
Trigger: TACATTACAATCCGTGGATCAGAGAATTGGAGCAAC...CTTAGCGGTTGGCTTGAACGATGGGAGTTTCCTGGTGGTAAATGCTGACACTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673746.1
CDS-3UTR TCA 90 bp CTTCCACATGGTTATTTCAATGCAAGATCCGATCAGCATGAAGAGTCTAGTACAAACGACACCCCCGGCTaGCATCATCGCCACCAAATT +
Preference number: 4 (lower is better)
Translates to: LPHGYFNARSDQHEESSTNDTPG*HHRHQI
Trigger: AATTTGGTGGCGATGATGTCAGCCGGGGGTGTCGTT...TGTACTAGACTCTTCATGCTGATCGGATCTTGCATTGAAATAACCATGTGGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR GCA 90 bp GCAGCCCACACAACTGGAAACTTTCAAAGGCACTTAATGGATATAAAACTCTGCCTAGTGAACCTCAGCTaGCGGTTACTAGGCGAGATC +
Preference number: 4 (lower is better)
Translates to: AAHTTGNFQRHLMDIKLCLVNLS*RLLGEI
Trigger: GATCTCGCCTAGTAACCGGCAGCTGAGGTTCACTAG...GCAGAGTTTTATATCCATTAAGTGCCTTTGAAAGTTTCCAGTTGTGTGGGCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356458.7
ENST00000673912.1
CDS-3UTR GCA 90 bp GTAACCGAGGCTTCAAAATTCGTCAGCGGGCTACATTATCAGATAGGATTTCTTGACCACCTCCTTGCCTaGCGTGTAGTACAGGTTGTT +
Preference number: 4 (lower is better)
Translates to: VTEASKFVSGLHYQIGFLDHLLA*RVVQVV
Trigger: AACAACCTGTACTACACGGCAGGCAAGGAGGTGGTC...AAGAAATCCTATCTGATAATGTAGCCCGCTGACGAATTTTGAAGCCTCGGTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp GCAGCCCACACAACTGGAAACTTTCAAAGGCACTTAATGGATATAAAACTCTGCCCCGACTTGGCCAGTTaGAACGAGAGTTTTGTCTGG +
Preference number: 4 (lower is better)
Translates to: AAHTTGNFQRHLMDIKLCPDLAS*NESFVW
Trigger: CCAGACAAAACTCTCGTTGCAACTGGCCAAGTCGGG...GCAGAGTTTTATATCCATTAAGTGCCTTTGAAAGTTTCCAGTTGTGTGGGCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp GTAACCGAGGCTTCAAAATTCGTCAGCGGGCTACATTATCAGATAGGATTTCTTGATCAGCCCCTCCTGTaGTCAACACCCACTGAAAGT +
Preference number: 4 (lower is better)
Translates to: VTEASKFVSGLHYQIGFLDQPLL*STPTES
Trigger: ACTTTCAGTGGGTGTTGAGCACAGGAGGGGCTGATC...AAGAAATCCTATCTGATAATGTAGCCCGCTGACGAATTTTGAAGCCTCGGTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp GTAACCGAGGCTTCAAAATTCGTCAGCGGGCTACATTATCAGATAGGATTTCTTCTCTGGGAGTGCTGCTaGCGATTATACACGACAGCA +
Preference number: 4 (lower is better)
Translates to: VTEASKFVSGLHYQIGFLLWECC*RLYTTA
Trigger: TGCTGTCGTGTATAATCGGCAGCAGCACTCCCAGAG...AAGAAATCCTATCTGATAATGTAGCCCGCTGACGAATTTTGAAGCCTCGGTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp AGCAGCCCACACAACTGGAAACTTTCAAAGGCACTTAATGGATATAAAACTCTGAGAATGTCGTCATCGTaGCCCAGGTACAGCCTCTGG +
Preference number: 4 (lower is better)
Translates to: SSPHNWKLSKALNGYKTLRMSSS*PRYSLW
Trigger: CCAGAGGCTGTACCTGGGGCACGATGACGACATTCT...CAGAGTTTTATATCCATTAAGTGCCTTTGAAAGTTTCCAGTTGTGTGGGCTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp ATCATAAGAGAAACGGATGTTCGTCACGTGAGCCGAGTGACCGAAGTATCGCTTCCCCCACCTGCTTGTTaGCAGAATTTGATGTGTTTT +
Preference number: 4 (lower is better)
Translates to: IIRETDVRHVSRVTEVSLPPPAC*QNLMCF
Trigger: AAAACACATCAAATTCTGGCAACAAGCAGGTGGGGG...AAGCGATACTTCGGTCACTCGGCTCACGTGACGAACATCCGTTTCTCTTATGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR GCA 90 bp TGTATAACTCTAGAGGTGAAAGATGTTGTTCTTGCCTCTTCTGTCACGCGAAGATTTGAGTTTCCGTACTaGCAGCATACGGTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: CITLEVKDVVLASSVTRRFEFPY*QHTVLG
Trigger: GCCCAGCACCGTATGCTGGCAGTACGGAAACTCAAA...TCTTCGCGTGACAGAAGAGGCAAGAACAACATCTTTCACCTCTAGAGTTATACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673746.1
CDS-3UTR GCA 90 bp ATCACGGTTTTGGAGAGTCCAGATTATGGGAGCAGTTGTGTAACTTCTGCAGCGAGTTATATCGCTATGTaGTGGCCAGATTCCCTCACA +
Preference number: 4 (lower is better)
Translates to: ITVLESPDYGSSCVTSAASYIAM*WPDSLT
Trigger: TGTGAGGGAATCTGGCCAGCACATAGCGATATAACT...CGCTGCAGAAGTTACACAACTGCTCCCATAATCTGGACTCTCCAAAACCGTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp AAAAGGAAGCTTTGTCAATGCTTCCCGCACACTCTCCGTGACTTTACGAATGCGATACTTCTTGAATCTTaGGTGCTGTCCCTTGACAGG +
Preference number: 4 (lower is better)
Translates to: KRKLCQCFPHTLRDFTNAILLES*VLSLDR
Trigger: CCTGTCAAGGGACAGCACGCAAGATTCAAGAAGTAT...CGCATTCGTAAAGTCACGGAGAGTGTGCGGGAAGCATTGACAAAGCTTCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR GCA 90 bp TGCTGCTCACCTTCCCATAAGCAGGTAACCGATGTCTTTCATTTAGGAAGCCTTCACGTTAGTGACATGTaGACTGTGCCCCACATACTT +
Preference number: 4 (lower is better)
Translates to: CCSPSHKQVTDVFHLGSLHVSDM*TVPHIL
Trigger: AAGTATGTGGGGCACAGTGCACATGTCACTAACGTG...AAGGCTTCCTAAATGAAAGACATCGGTTACCTGCTTATGGGAAGGTGAGCAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp TTTCGTTCACTGACCAGAAGGACTAATAGGCGTCTATGTGCTCAGAACCACCAGGTGATATTGTTCTTCTaGAGTTTCTCAGGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: FRSLTRRTNRRLCAQNHQVILFF*SFSGWG
Trigger: TCCCCAGCCTGAGAAACTGCAGAAGAACAATATCAC...CTGGTGGTTCTGAGCACATAGACGCCTATTAGTCCTTCTGGTCAGTGAACGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp GTAACCGAGGCTTCAAAATTCGTCAGCGGGCTACATTATCAGATAGGATTTCTTAACGATGCCAGCCGCTaGTGTGTGGAAGATGATGTC +
Preference number: 4 (lower is better)
Translates to: VTEASKFVSGLHYQIGFLNDASR*CVEDDV
Trigger: GACATCATCTTCCACACAGCAGCGGCTGGCATCGTT...AAGAAATCCTATCTGATAATGTAGCCCGCTGACGAATTTTGAAGCCTCGGTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp TGCTGCTCACCTTCCCATAAGCAGGTAACCGATGTCTTTCATTTAGGAAGCCTTTTTCTGTACTTGGGGTaGTGGTTCACTGTGAGACAG +
Preference number: 4 (lower is better)
Translates to: CCSPSHKQVTDVFHLGSLFLYLG*WFTVRQ
Trigger: CTGTCTCACAGTGAACCAGCACCCCAAGTACAGAAA...AAGGCTTCCTAAATGAAAGACATCGGTTACCTGCTTATGGGAAGGTGAGCAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp TGTCCAAGTCATATTCCGTCATACAACCAACTCCAAGGAACTCTAACTCACTTTAAGCAAGGCGCTGCCTaGCAGGGTCCAGAACTTCAT +
Preference number: 4 (lower is better)
Translates to: CPSHIPSYNQLQGTLTHFKQGAA*QGPELH
Trigger: ATGAAGTTCTGGACCCTGGCAGGCAGCGCCTTGCTT...AAAGTGAGTTAGAGTTCCTTGGAGTTGGTTGTATGACGGAATATGACTTGGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp ATCATAAGAGAAACGGATGTTCGTCACGTGAGCCGAGTGACCGAAGTATCGCTTAGCTTGGGATATCTTTaGAGTAGCCAATGCGGTTCA +
Preference number: 4 (lower is better)
Translates to: IIRETDVRHVSRVTEVSLSLGYL*SSQCGS
Trigger: TGAACCGCATTGGCTACTGCAAAGATATCCCAAGCT...AAGCGATACTTCGGTCACTCGGCTCACGTGACGAACATCCGTTTCTCTTATGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR GCA 90 bp GATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACAGAAAACGACATCAGCCTTGTCTaGATTTCGTGGCCAGATTCC +
Preference number: 4 (lower is better)
Translates to: DRQTWLSLCITSHMVTENDISLV*ISWPDS
Trigger: GGAATCTGGCCACGAAATGCAGACAAGGCTGATGTC...GTTTTCTGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp GCAGCCCACACAACTGGAAACTTTCAAAGGCACTTAATGGATATAAAACTCTGCAGCGTGGGTCACACATaGGCAGTTGACATCAGCCTT +
Preference number: 4 (lower is better)
Translates to: AAHTTGNFQRHLMDIKLCSVGHT*AVDISL
Trigger: AAGGCTGATGTCAACTGCGCATGTGTGACCCACGCT...GCAGAGTTTTATATCCATTAAGTGCCTTTGAAAGTTTCCAGTTGTGTGGGCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp GTAACCGAGGCTTCAAAATTCGTCAGCGGGCTACATTATCAGATAGGATTTCTTAGCGTTTTGAGCTTGTaGATCCGGGGCAGCATGGTA +
Preference number: 4 (lower is better)
Translates to: VTEASKFVSGLHYQIGFLSVLSL*IRGSMV
Trigger: TACCATGCTGCCCCGGATGCACAAGCTCAAAACGCT...AAGAAATCCTATCTGATAATGTAGCCCGCTGACGAATTTTGAAGCCTCGGTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp ATCACGGTTTTGGAGAGTCCAGATTATGGGAGCAGTTGTGTAACTTCTGCAGCGCAGTTGTGTAACTTCTaGAGCGTTTTGAGCTTGTGC +
Preference number: 4 (lower is better)
Translates to: ITVLESPDYGSSCVTSAAQLCNF*SVLSLC
Trigger: GCACAAGCTCAAAACGCTGCAGAAGTTACACAACTG...CGCTGCAGAAGTTACACAACTGCTCCCATAATCTGGACTCTCCAAAACCGTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp TGTCCAAGTCATATTCCGTCATACAACCAACTCCAAGGAACTCTAACTCACTTTGGTGGTACACCAAGGTaGAGCCTTGGGTTACCCTCA +
Preference number: 4 (lower is better)
Translates to: CPSHIPSYNQLQGTLTHFGGTPR*SLGLPS
Trigger: TGAGGGTAACCCAAGGCTGCACCTTGGTGTACCACC...AAAGTGAGTTAGAGTTCCTTGGAGTTGGTTGTATGACGGAATATGACTTGGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp AGCAGCCCACACAACTGGAAACTTTCAAAGGCACTTAATGGATATAAAACTCTGGGCTCCTTCCCGACTTaGCCAGTTGCAACGAGAGTT +
Preference number: 4 (lower is better)
Translates to: SSPHNWKLSKALNGYKTLGSFPT*PVATRV
Trigger: AACTCTCGTTGCAACTGGCCAAGTCGGGAAGGAGCC...CAGAGTTTTATATCCATTAAGTGCCTTTGAAAGTTTCCAGTTGTGTGGGCTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp TGTCCAAGTCATATTCCGTCATACAACCAACTCCAAGGAACTCTAACTCACTTTAGCTCACCCTCGCAGTaGCCCTGTAGGATCAACATC +
Preference number: 4 (lower is better)
Translates to: CPSHIPSYNQLQGTLTHFSSPSQ*PCRINI
Trigger: GATGTTGATCCTACAGGGCCACTGCGAGGGTGAGCT...AAAGTGAGTTAGAGTTCCTTGGAGTTGGTTGTATGACGGAATATGACTTGGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp GTACAAGATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACACTACTGGGCCATCATTaGATCCCACTGCAAGGTAAG +
Preference number: 4 (lower is better)
Translates to: VQDRQTWLSLCITSHMVTLLGHH*IPLQGK
Trigger: CTTACCTTGCAGTGGGATCCAATGATGGCCCAGTAG...TGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATCTTGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp AATGAAGTCACCTCAACTCCACTCAGGGTGGTACACCAAGGTGCAGCCTTGGGTTATGTCCTCTTGTTGTaGCTATCTTTTCTCCCTTTT +
Preference number: 4 (lower is better)
Translates to: NEVTSTPLRVVHQGAALGYVLLL*LSFLPF
Trigger: AAAAGGGAGAAAAGATAGCCACAACAAGAGGACATA...ACCCAAGGCTGCACCTTGGTGTACCACCCTGAGTGGAGTTGAGGTGACTTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp AATGAAGTCACCTCAACTCCACTCAGGGTGGTACACCAAGGTGCAGCCTTGGGTTTTGTCAACATGGTGTaGGTTACACTTTACCACAAA +
Preference number: 4 (lower is better)
Translates to: NEVTSTPLRVVHQGAALGFVNMV*VTLYHK
Trigger: TTTGTGGTAAAGTGTAACCCACACCATGTTGACAAA...ACCCAAGGCTGCACCTTGGTGTACCACCCTGAGTGGAGTTGAGGTGACTTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp TTGTGTGCAGGGGAAGACAGGGTACCTTTATTTTCTCAGAAACTCTTCAATCAAGCCAGCATACGGTGCTaGGCAGATAGTTCCCAGATG +
Preference number: 4 (lower is better)
Translates to: LCAGEDRVPLFSQKLFNQASIRC*ADSSQM
Trigger: CATCTGGGAACTATCTGCCCAGCACCGTATGCTGGC...TTGATTGAAGAGTTTCTGAGAAAATAAAGGTACCCTGTCTTCCCCTGCACACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR CCA 90 bp TTTCGTTCACTGACCAGAAGGACTAATAGGCGTCTATGTGCTCAGAACCACCAGTCCACAAAGTTATCATaGGATGCCACGGCAAGGTAT +
Preference number: 4 (lower is better)
Translates to: FRSLTRRTNRRLCAQNHQSTKLS*DATARY
Trigger: ATACCTTGCCGTGGCATCCCATGATAACTTTGTGGA...CTGGTGGTTCTGAGCACATAGACGCCTATTAGTCCTTCTGGTCAGTGAACGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp CTTCCACATGGTTATTTCAATGCAAGATCCGATCAGCATGAAGAGTCTAGTACATCCCCACAAACTCCCTaGTCCAGATCATCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: LPHGYFNARSDQHEESSTSPQTP*SRSSGL
Trigger: CAGCCCTGATGATCTGGACCAGGGAGTTTGTGGGGA...TGTACTAGACTCTTCATGCTGATCGGATCTTGCATTGAAATAACCATGTGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp GTAACCGAGGCTTCAAAATTCGTCAGCGGGCTACATTATCAGATAGGATTTCTTCTTCAGCTGCTGGTGTaGCTTGGTGCCTTCCATTTC +
Preference number: 4 (lower is better)
Translates to: VTEASKFVSGLHYQIGFLLQLLV*LGAFHF
Trigger: GAAATGGAAGGCACCAAGCCACACCAGCAGCTGAAG...AAGAAATCCTATCTGATAATGTAGCCCGCTGACGAATTTTGAAGCCTCGGTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp TGTCCAAGTCATATTCCGTCATACAACCAACTCCAAGGAACTCTAACTCACTTTACTTCCTTCAGCTGCTaGTGTGGCTTGGTGCCTTCC +
Preference number: 4 (lower is better)
Translates to: CPSHIPSYNQLQGTLTHFTSFSC*CGLVPS
Trigger: GGAAGGCACCAAGCCACACCAGCAGCTGAAGGAAGT...AAAGTGAGTTAGAGTTCCTTGGAGTTGGTTGTATGACGGAATATGACTTGGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp AGCAGCCCACACAACTGGAAACTTTCAAAGGCACTTAATGGATATAAAACTCTGAGCTCTGGCTCCCTGTaGAGAGGTTCTGAACGATGC +
Preference number: 4 (lower is better)
Translates to: SSPHNWKLSKALNGYKTLSSGSL*RGSERC
Trigger: GCATCGTTCAGAACCTCTCCACAGGGAGCCAGAGCT...CAGAGTTTTATATCCATTAAGTGCCTTTGAAAGTTTCCAGTTGTGTGGGCTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp GCAGCCCACACAACTGGAAACTTTCAAAGGCACTTAATGGATATAAAACTCTGCCTGTACTTGGGGTGCTaGTTCACTGTGAGACAGAGG +
Preference number: 4 (lower is better)
Translates to: AAHTTGNFQRHLMDIKLCLYLGC*FTVRQR
Trigger: CCTCTGTCTCACAGTGAACCAGCACCCCAAGTACAG...GCAGAGTTTTATATCCATTAAGTGCCTTTGAAAGTTTCCAGTTGTGTGGGCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp GTAACCGAGGCTTCAAAATTCGTCAGCGGGCTACATTATCAGATAGGATTTCTTTCCCTATCTGGCTGGTaGCCACCACGTTTCTGTACT +
Preference number: 4 (lower is better)
Translates to: VTEASKFVSGLHYQIGFLSLSGW*PPRFCT
Trigger: AGTACAGAAACGTGGTGGCCACCAGCCAGATAGGGA...AAGAAATCCTATCTGATAATGTAGCCCGCTGACGAATTTTGAAGCCTCGGTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp TACAAGATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACAGATGGCGTCCCATATGTaGATGGAAGGTGTTGTCCCT +
Preference number: 4 (lower is better)
Translates to: YKIGRHGYHSASPVTWLQMASHM*MEGVVP
Trigger: AGGGACAACACCTTCCATCCACATATGGGACGCCAT...CTGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATCTTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp AATTTTCGTTCACTGACCAGAAGGACTAATAGGCGTCTATGTGCTCAGAACCACTGGAGAGGGTGTGTTTaGTCATGGCGTCCCATATGT +
Preference number: 4 (lower is better)
Translates to: NFRSLTRRTNRRLCAQNHWRGCV*SWRPIC
Trigger: ACATATGGGACGCCATGACCAAACACACCCTCTCCA...GTGGTTCTGAGCACATAGACGCCTATTAGTCCTTCTGGTCAGTGAACGAAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp ATCACGGTTTTGGAGAGTCCAGATTATGGGAGCAGTTGTGTAACTTCTGCAGCGCTTGTCTGCATTTCGTaGCCAGATTCCAATGACTTC +
Preference number: 4 (lower is better)
Translates to: ITVLESPDYGSSCVTSAALVCIS*PDSNDF
Trigger: GAAGTCATTGGAATCTGGCCACGAAATGCAGACAAG...CGCTGCAGAAGTTACACAACTGCTCCCATAATCTGGACTCTCCAAAACCGTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp TTTCGTTCACTGACCAGAAGGACTAATAGGCGTCTATGTGCTCAGAACCACCAGGGAGAGTCCAGATTATaGGAGCAGTTGTGTAACTTC +
Preference number: 4 (lower is better)
Translates to: FRSLTRRTNRRLCAQNHQGESRL*EQLCNF
Trigger: GAAGTTACACAACTGCTCCCATAATCTGGACTCTCC...CTGGTGGTTCTGAGCACATAGACGCCTATTAGTCCTTCTGGTCAGTGAACGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp TGCTGCTCACCTTCCCATAAGCAGGTAACCGATGTCTTTCATTTAGGAAGCCTTGTGGCATCACGGTTTTaGAGAGTCCAGATTATGGGA +
Preference number: 4 (lower is better)
Translates to: CCSPSHKQVTDVFHLGSLVASRF*RVQIMG
Trigger: TCCCATAATCTGGACTCTCCAAAACCGTGATGCCAC...AAGGCTTCCTAAATGAAAGACATCGGTTACCTGCTTATGGGAAGGTGAGCAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp GTACAAGATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACAGGAGAAAGGAGAAATTaGTGGGAGGTGAGACAGCAG +
Preference number: 4 (lower is better)
Translates to: VQDRQTWLSLCITSHMVTGERRN*WEVRQQ
Trigger: CTGCTGTCTCACCTCCCACCAATTTCTCCTTTCTCC...TGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATCTTGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp TTTCGTTCACTGACCAGAAGGACTAATAGGCGTCTATGTGCTCAGAACCACCAGACCAAGGTGCAGCCTTaGGTTACCCTCATTTATCTT +
Preference number: 4 (lower is better)
Translates to: FRSLTRRTNRRLCAQNHQTKVQP*VTLIYL
Trigger: AAGATAAATGAGGGTAACCCAAGGCTGCACCTTGGT...CTGGTGGTTCTGAGCACATAGACGCCTATTAGTCCTTCTGGTCAGTGAACGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp TTGTGTGCAGGGGAAGACAGGGTACCTTTATTTTCTCAGAAACTCTTCAATCAACAACTCCACTCAGGGTaGTACACCAAGGTGCAGCCT +
Preference number: 4 (lower is better)
Translates to: LCAGEDRVPLFSQKLFNQQLHSG*YTKVQP
Trigger: AGGCTGCACCTTGGTGTACCACCCTGAGTGGAGTTG...TTGATTGAAGAGTTTCTGAGAAAATAAAGGTACCCTGTCTTCCCCTGCACACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR CCA 90 bp AATGAAGTCACCTCAACTCCACTCAGGGTGGTACACCAAGGTGCAGCCTTGGGTAAGAAACCTGCATTGTaGCAAATTCAGCGGATTTTA +
Preference number: 4 (lower is better)
Translates to: NEVTSTPLRVVHQGAALGKKPAL*QIQRIL
Trigger: TAAAATCCGCTGAATTTGCCACAATGCAGGTTTCTT...ACCCAAGGCTGCACCTTGGTGTACCACCCTGAGTGGAGTTGAGGTGACTTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR CCA 90 bp ATCATAAGAGAAACGGATGTTCGTCACGTGAGCCGAGTGACCGAAGTATCGCTTACAATGACATCTTCCTaGATGTCGTGGGGAGTTATG +
Preference number: 4 (lower is better)
Translates to: IIRETDVRHVSRVTEVSLTMTSS*MSWGVM
Trigger: CATAACTCCCCACGACATCCAGGAAGATGTCATTGT...AAGCGATACTTCGGTCACTCGGCTCACGTGACGAACATCCGTTTCTCTTATGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR CAA 72 bp CATCACGGTTTTGGAGAGTCCAGATTATGGGAGCAGTaGTGTAACTTCTGCAGCGTTTTGAGCTTGTGCATC +
Preference number: 4 (lower is better)
Translates to: HHGFGESRLWEQ*CNFCSVLSLCI
Trigger: GATGCACAAGCTCAAAACGCTGCAGAAGTTACACAACTGCTCCCATAATCTGGACTCTCCAAAACCGTGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
3UTR CAA 72 bp GACACTGGAACTATGGCATGGCTCATAAGGCATTATTaGAGGATAAACACAGGGCTCGATTTCAGGGGACAC +
Preference number: 4 (lower is better)
Translates to: DTGTMAWLIRHY*RINTGLDFRGH
Trigger: GTGTCCCCTGAAATCGAGCCCTGTGTTTATCCTCAAATAATGCCTTATGAGCCATGCCATAGTTCCAGTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR TCA 90 bp AGCAGCCCACACAACTGGAAACTTTCAAAGGCACTTAATGGATATAAAACTCTGCTTTGGATCCGAAATTaGCAGTCTCTGCTGCCAGCG +
Preference number: 4 (lower is better)
Translates to: SSPHNWKLSKALNGYKTLLWIRN*QSLLPA
Trigger: CGCTGGCAGCAGAGACTGTCAATTTCGGATCCAAAG...CAGAGTTTTATATCCATTAAGTGCCTTTGAAAGTTTCCAGTTGTGTGGGCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356458.7
ENST00000673912.1
CDS-3UTR TCA 90 bp AATTTTCGTTCACTGACCAGAAGGACTAATAGGCGTCTATGTGCTCAGAACCACGCACTATGTGCTCCTTaGATGGTGCGGACTAAATTG +
Preference number: 4 (lower is better)
Translates to: NFRSLTRRTNRRLCAQNHALCAP*MVRTKL
Trigger: CAATTTAGTCCGCACCATTCAAGGAGCACATAGTGC...GTGGTTCTGAGCACATAGACGCCTATTAGTCCTTCTGGTCAGTGAACGAAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp AGCAGCCCACACAACTGGAAACTTTCAAAGGCACTTAATGGATATAAAACTCTGACCAGCGGACATTTGTaGCATGTGCAGAATGGCCCA +
Preference number: 4 (lower is better)
Translates to: SSPHNWKLSKALNGYKTLTSGHL*HVQNGP
Trigger: TGGGCCATTCTGCACATGTCACAAATGTCCGCTGGT...CAGAGTTTTATATCCATTAAGTGCCTTTGAAAGTTTCCAGTTGTGTGGGCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp ATCACGGTTTTGGAGAGTCCAGATTATGGGAGCAGTTGTGTAACTTCTGCAGCGCTCTATAACCGTGTATaGACTGGAGTTTCAAGCTGT +
Preference number: 4 (lower is better)
Translates to: ITVLESPDYGSSCVTSAALYNRV*TGVSSC
Trigger: ACAGCTTGAAACTCCAGTTCATACACGGTTATAGAG...CGCTGCAGAAGTTACACAACTGCTCCCATAATCTGGACTCTCCAAAACCGTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp AATTTTCGTTCACTGACCAGAAGGACTAATAGGCGTCTATGTGCTCAGAACCACTGTGTGTCCCACACATaGATAGCAGCATCTCTTCCA +
Preference number: 4 (lower is better)
Translates to: NFRSLTRRTNRRLCAQNHCVSHT*IAASLP
Trigger: TGGAAGAGATGCTGCTATTCATGTGTGGGACACACA...GTGGTTCTGAGCACATAGACGCCTATTAGTCCTTCTGGTCAGTGAACGAAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp AGGAAACTCCCATCGTTCAAGCCAACCGCTAAGGCTTTCCCATCAGGGGAAAAGATCATTTCTTTTCTGTaGTGGAAAGAGACCATGTCT +
Preference number: 4 (lower is better)
Translates to: RKLPSFKPTAKAFPSGEKIISFL*WKETMS
Trigger: AGACATGGTCTCTTTCCATCACAGAAAAGAAATGAT...CTTTTCCCCTGATGGGAAAGCCTTAGCGGTTGGCTTGAACGATGGGAGTTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000673655.1
ENST00000673746.1
ENST00000673916.1
ENST00000674035.1
CDS-3UTR TCA 90 bp TGCTGCTCACCTTCCCATAAGCAGGTAACCGATGTCTTTCATTTAGGAAGCCTTTGCCTTCCATTTCCCTaGTGCTCACAGCATAAATCT +
Preference number: 4 (lower is better)
Translates to: CCSPSHKQVTDVFHLGSLCLPFP*CSQHKS
Trigger: AGATTTATGCTGTGAGCATCAGGGAAATGGAAGGCA...AAGGCTTCCTAAATGAAAGACATCGGTTACCTGCTTATGGGAAGGTGAGCAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp TGTCCAAGTCATATTCCGTCATACAACCAACTCCAAGGAACTCTAACTCACTTTTACAAACTGCGTGTCTaGGTCGGGGCGAAATTCCAC +
Preference number: 4 (lower is better)
Translates to: CPSHIPSYNQLQGTLTHFYKLRV*VGAKFH
Trigger: GTGGAATTTCGCCCCGACTCAGACACGCAGTTTGTA...AAAGTGAGTTAGAGTTCCTTGGAGTTGGTTGTATGACGGAATATGACTTGGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp GTAACCGAGGCTTCAAAATTCGTCAGCGGGCTACATTATCAGATAGGATTTCTTGCACCTGTTGACACCTaGATGTATTTGCCATCCGCA +
Preference number: 4 (lower is better)
Translates to: VTEASKFVSGLHYQIGFLAPVDT*MYLPSA
Trigger: TGCGGATGGCAAATACATTCAGGTGTCAACAGGTGC...AAGAAATCCTATCTGATAATGTAGCCCGCTGACGAATTTTGAAGCCTCGGTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp TACAAGATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACAGAACACAGGACAAGGGTaGCACACTGAATCTGCTAAG +
Preference number: 4 (lower is better)
Translates to: YKIGRHGYHSASPVTWLQNTGQG*HTESAK
Trigger: CTTAGCAGATTCAGTGTGTCACCCTTGTCCTGTGTT...CTGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATCTTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp ATCACGGTTTTGGAGAGTCCAGATTATGGGAGCAGTTGTGTAACTTCTGCAGCGAGTGGGACTTTCAAATaGAATCCGTGGGTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: ITVLESPDYGSSCVTSAASGTFK*NPWVSS
Trigger: AGAAGAAACCCACGGATTTCATTTGAAAGTCCCACT...CGCTGCAGAAGTTACACAACTGCTCCCATAATCTGGACTCTCCAAAACCGTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR GCA 90 bp CTTCCACATGGTTATTTCAATGCAAGATCCGATCAGCATGAAGAGTCTAGTACAAGTAGACCACCTCCTTaGCTGCCGTGTAGTACAGGT +
Preference number: 4 (lower is better)
Translates to: LPHGYFNARSDQHEESSTSRPPP*LPCSTG
Trigger: ACCTGTACTACACGGCAGGCAAGGAGGTGGTCTACT...TGTACTAGACTCTTCATGCTGATCGGATCTTGCATTGAAATAACCATGTGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp ACGGTTTTGGAGAGTCCAGATTATGGGAGCAGTTGTGTAACTTCTGCAGCGTTTTCCTCCAGTCCCAAATaGAGACTGTGTTTTTGGCAT +
Preference number: 4 (lower is better)
Translates to: TVLESPDYGSSCVTSAAFSSSPK*RLCFWH
Trigger: ATGCCAAAAACACAGTCTGCATTTGGGACTGGAGGA...AAACGCTGCAGAAGTTACACAACTGCTCCCATAATCTGGACTCTCCAAAACCGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp CTTCCACATGGTTATTTCAATGCAAGATCCGATCAGCATGAAGAGTCTAGTACATCCACCTTCTTGGGGTaGAGTTTCCAGCATGCCGTT +
Preference number: 4 (lower is better)
Translates to: LPHGYFNARSDQHEESSTSTFLG*SFQHAV
Trigger: AACGGCATGCTGGAAACTGCACCCCAAGAAGGTGGA...TGTACTAGACTCTTCATGCTGATCGGATCTTGCATTGAAATAACCATGTGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp TGTCCAAGTCATATTCCGTCATACAACCAACTCCAAGGAACTCTAACTCACTTTAGCCTCTGGGAGTGCTaGTGCCGATTATACACGACA +
Preference number: 4 (lower is better)
Translates to: CPSHIPSYNQLQGTLTHFSLWEC*CRLYTT
Trigger: TGTCGTGTATAATCGGCAGCAGCACTCCCAGAGGCT...AAAGTGAGTTAGAGTTCCTTGGAGTTGGTTGTATGACGGAATATGACTTGGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp ATCATAAGAGAAACGGATGTTCGTCACGTGAGCCGAGTGACCGAAGTATCGCTTAAAGCCCTTATCCAGTaGATACATAGCAAACACAGG +
Preference number: 4 (lower is better)
Translates to: IIRETDVRHVSRVTEVSLKALIQ*IHSKHR
Trigger: CCTGTGTTTGCTATGTATGCACTGGATAAGGGCTTT...AAGCGATACTTCGGTCACTCGGCTCACGTGACGAACATCCGTTTCTCTTATGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR GCA 90 bp AGCAGCCCACACAACTGGAAACTTTCAAAGGCACTTAATGGATATAAAACTCTGATCATCGCTCACTGTTaGACAGATGGGCAGGAGAGG +
Preference number: 4 (lower is better)
Translates to: SSPHNWKLSKALNGYKTLIIAHC*TDGQER
Trigger: CCTCTCCTGCCCATCTGTGCAACAGTGAGCGATGAT...CAGAGTTTTATATCCATTAAGTGCCTTTGAAAGTTTCCAGTTGTGTGGGCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp TGCTGCTCACCTTCCCATAAGCAGGTAACCGATGTCTTTCATTTAGGAAGCCTTAGTTATATCGCTATGTaGTGGCCAGATTCCCTCACA +
Preference number: 4 (lower is better)
Translates to: CCSPSHKQVTDVFHLGSLSYIAM*WPDSLT
Trigger: TGTGAGGGAATCTGGCCAGCACATAGCGATATAACT...AAGGCTTCCTAAATGAAAGACATCGGTTACCTGCTTATGGGAAGGTGAGCAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp ATCACGGTTTTGGAGAGTCCAGATTATGGGAGCAGTTGTGTAACTTCTGCAGCGTTCTTGAATCTTGCGTaGTGTCCCTTGACAGGATAT +
Preference number: 4 (lower is better)
Translates to: ITVLESPDYGSSCVTSAAFLNLA*CPLTGY
Trigger: ATATCCTGTCAAGGGACAGCACGCAAGATTCAAGAA...CGCTGCAGAAGTTACACAACTGCTCCCATAATCTGGACTCTCCAAAACCGTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp ATCATAAGAGAAACGGATGTTCGTCACGTGAGCCGAGTGACCGAAGTATCGCTTTTCTTGAATCTTGCGTaGTGTCCCTTGACAGGATAT +
Preference number: 4 (lower is better)
Translates to: IIRETDVRHVSRVTEVSLFLNLA*CPLTGY
Trigger: ATATCCTGTCAAGGGACAGCACGCAAGATTCAAGAA...AAGCGATACTTCGGTCACTCGGCTCACGTGACGAACATCCGTTTCTCTTATGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR GCA 90 bp AATTTTCGTTCACTGACCAGAAGGACTAATAGGCGTCTATGTGCTCAGAACCACCACGTTAGTGACATGTaGACTGTGCCCCACATACTT +
Preference number: 4 (lower is better)
Translates to: NFRSLTRRTNRRLCAQNHHVSDM*TVPHIL
Trigger: AAGTATGTGGGGCACAGTGCACATGTCACTAACGTG...GTGGTTCTGAGCACATAGACGCCTATTAGTCCTTCTGGTCAGTGAACGAAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp TGTCCAAGTCATATTCCGTCATACAACCAACTCCAAGGAACTCTAACTCACTTTGAAACTTCCTTCAGCTaGTGGTGTGGCTTGGTGCCT +
Preference number: 4 (lower is better)
Translates to: CPSHIPSYNQLQGTLTHFETSFS*WCGLVP
Trigger: AGGCACCAAGCCACACCAGCAGCTGAAGGAAGTTTC...AAAGTGAGTTAGAGTTCCTTGGAGTTGGTTGTATGACGGAATATGACTTGGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp TGCTGCTCACCTTCCCATAAGCAGGTAACCGATGTCTTTCATTTAGGAAGCCTTGTGATATTGTTCTTCTaGAGTTTCTCAGGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: CCSPSHKQVTDVFHLGSLVILFF*SFSGWG
Trigger: TCCCCAGCCTGAGAAACTGCAGAAGAACAATATCAC...AAGGCTTCCTAAATGAAAGACATCGGTTACCTGCTTATGGGAAGGTGAGCAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp TTGTGTGCAGGGGAAGACAGGGTACCTTTATTTTCTCAGAAACTCTTCAATCAAAACGATGCCAGCCGCTaGTGTGTGGAAGATGATGTC +
Preference number: 4 (lower is better)
Translates to: LCAGEDRVPLFSQKLFNQNDASR*CVEDDV
Trigger: GACATCATCTTCCACACAGCAGCGGCTGGCATCGTT...TTGATTGAAGAGTTTCTGAGAAAATAAAGGTACCCTGTCTTCCCCTGCACACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR GCA 90 bp TACAAGATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACAGCTTTGCAGTAGCCAATaGGGTTCAGATTTGTGCCCT +
Preference number: 4 (lower is better)
Translates to: YKIGRHGYHSASPVTWLQLCSSQ*GSDLCP
Trigger: AGGGCACAAATCTGAACCGCATTGGCTACTGCAAAG...CTGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATCTTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp GTACAAGATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACACTTTGCAGTAGCCAATaGGGTTCAGATTTGTGCCCT +
Preference number: 4 (lower is better)
Translates to: VQDRQTWLSLCITSHMVTLCSSQ*GSDLCP
Trigger: AGGGCACAAATCTGAACCGCATTGGCTACTGCAAAG...TGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATCTTGTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp GCAGCCCACACAACTGGAAACTTTCAAAGGCACTTAATGGATATAAAACTCTGCGACATCAGCCTTGTCTaGATTTCGTGGCCAGATTCC +
Preference number: 4 (lower is better)
Translates to: AAHTTGNFQRHLMDIKLCDISLV*ISWPDS
Trigger: GGAATCTGGCCACGAAATGCAGACAAGGCTGATGTC...GCAGAGTTTTATATCCATTAAGTGCCTTTGAAAGTTTCCAGTTGTGTGGGCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp TACAAGATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACAGAAACAGAATTGGGACTaGATAGGGACTCTACTGCGG +
Preference number: 4 (lower is better)
Translates to: YKIGRHGYHSASPVTWLQKQNWD*IGTLLR
Trigger: CCGCAGTAGAGTCCCTATGCAGTCCCAATTCTGTTT...CTGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATCTTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp CACATACTTGTCATCATAAGAGAAACGGATGTTCGTCACGTGAGCCGAGTGACCTACTTGACAATTCCCTaGCTTTCTTCCACGGAAACT +
Preference number: 4 (lower is better)
Translates to: HILVIIRETDVRHVSRVTYLTIP*LSSTET
Trigger: AGTTTCCGTGGAAGAAAGGCAGGGAATTGTCAAGTA...GGTCACTCGGCTCACGTGACGAACATCCGTTTCTCTTATGATGACAAGTATGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR GCA 90 bp GTACAAGATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACAACTCTGCTTAGAGTGTaGTGGGGAGAAACTTGCTGT +
Preference number: 4 (lower is better)
Translates to: VQDRQTWLSLCITSHMVTTLLRV*WGETCC
Trigger: ACAGCAAGTTTCTCCCCAGCACACTCTAAGCAGAGT...TGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATCTTGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR CCA 90 bp GTACAAGATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACACCATATGCATATATATaGCTCCTTCCCGACTTGGCC +
Preference number: 4 (lower is better)
Translates to: VQDRQTWLSLCITSHMVTPYAYI*LLPDLA
Trigger: GGCCAAGTCGGGAAGGAGCCATATATATGCATATGG...TGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATCTTGTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp CTTCCACATGGTTATTTCAATGCAAGATCCGATCAGCATGAAGAGTCTAGTACAAAAATCCTGTCAGAATaGCCGGTGGCTGACGCCAGA +
Preference number: 4 (lower is better)
Translates to: LPHGYFNARSDQHEESSTKILSE*PVADAR
Trigger: TCTGGCGTCAGCCACCGGCCATTCTGACAGGATTTT...TGTACTAGACTCTTCATGCTGATCGGATCTTGCATTGAAATAACCATGTGGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp GTACAAGATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACAGCTAACCACTCTGTTTaGCTGATATGGATCCCAGGA +
Preference number: 4 (lower is better)
Translates to: VQDRQTWLSLCITSHMVTANHSV*LIWIPG
Trigger: TCCTGGGATCCATATCAGCCAAACAGAGTGGTTAGC...TGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATCTTGTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp CTTCCACATGGTTATTTCAATGCAAGATCCGATCAGCATGAAGAGTCTAGTACAAATATCTCACTGTCCTaGGTCCCTGCTAGAAGGCGG +
Preference number: 4 (lower is better)
Translates to: LPHGYFNARSDQHEESSTNISLS*VPARRR
Trigger: CCGCCTTCTAGCAGGGACCCAGGACAGTGAGATATT...TGTACTAGACTCTTCATGCTGATCGGATCTTGCATTGAAATAACCATGTGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp GTAACCGAGGCTTCAAAATTCGTCAGCGGGCTACATTATCAGATAGGATTTCTTCTACTGGGCCATCATTaGATCCCACTGCAAGGTAAG +
Preference number: 4 (lower is better)
Translates to: VTEASKFVSGLHYQIGFLLLGHH*IPLQGK
Trigger: CTTACCTTGCAGTGGGATCCAATGATGGCCCAGTAG...AAGAAATCCTATCTGATAATGTAGCCCGCTGACGAATTTTGAAGCCTCGGTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp GCAGCCCACACAACTGGAAACTTTCAAAGGCACTTAATGGATATAAAACTCTGCCACATAGTCCTTCACTaGATGGATGGTCAGGCTGAG +
Preference number: 4 (lower is better)
Translates to: AAHTTGNFQRHLMDIKLCHIVLH*MDGQAE
Trigger: CTCAGCCTGACCATCCATCCAGTGAAGGACTATGTG...GCAGAGTTTTATATCCATTAAGTGCCTTTGAAAGTTTCCAGTTGTGTGGGCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp AGCATATGTTTACAGCTGTATTGCTTCAAAACTGAAGATGAGAGGAGCAAGGGGCACATAGTCCTTCACTaGATGGATGGTCAGGCTGAG +
Preference number: 4 (lower is better)
Translates to: SICLQLYCFKTEDERSKGHIVLH*MDGQAE
Trigger: CTCAGCCTGACCATCCATCCAGTGAAGGACTATGTG...CCCCTTGCTCCTCTCATCTTCAGTTTTGAAGCAATACAGCTGTAAACATATGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR CCA 90 bp TGTCCAAGTCATATTCCGTCATACAACCAACTCCAAGGAACTCTAACTCACTTTCTGTACTTGGGGTGCTaGTTCACTGTGAGACAGAGG +
Preference number: 4 (lower is better)
Translates to: CPSHIPSYNQLQGTLTHFLYLGC*FTVRQR
Trigger: CCTCTGTCTCACAGTGAACCAGCACCCCAAGTACAG...AAAGTGAGTTAGAGTTCCTTGGAGTTGGTTGTATGACGGAATATGACTTGGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp TGTCCAAGTCATATTCCGTCATACAACCAACTCCAAGGAACTCTAACTCACTTTTTGTCCCTATCTGGCTaGTGGCCACCACGTTTCTGT +
Preference number: 4 (lower is better)
Translates to: CPSHIPSYNQLQGTLTHFLSLSG*WPPRFC
Trigger: ACAGAAACGTGGTGGCCACCAGCCAGATAGGGACAA...AAAGTGAGTTAGAGTTCCTTGGAGTTGGTTGTATGACGGAATATGACTTGGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp AGCCCACACAACTGGAAACTTTCAAAGGCACTTAATGGATATAAAACTCTGCAAGGTGTTGTCCCTATCTaGCTGGTGGCCACCACGTTT +
Preference number: 4 (lower is better)
Translates to: SPHNWKLSKALNGYKTLQGVVPI*LVATTF
Trigger: AAACGTGGTGGCCACCAGCCAGATAGGGACAACACC...TTGCAGAGTTTTATATCCATTAAGTGCCTTTGAAAGTTTCCAGTTGTGTGGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp AATTTTCGTTCACTGACCAGAAGGACTAATAGGCGTCTATGTGCTCAGAACCACCGTCCCATATGTGGATaGAAGGTGTTGTCCCTATCT +
Preference number: 4 (lower is better)
Translates to: NFRSLTRRTNRRLCAQNHRPICG*KVLSLS
Trigger: AGATAGGGACAACACCTTCCATCCACATATGGGACG...GTGGTTCTGAGCACATAGACGCCTATTAGTCCTTCTGGTCAGTGAACGAAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp GTAACCGAGGCTTCAAAATTCGTCAGCGGGCTACATTATCAGATAGGATTTCTTATGGCGTCCCATATGTaGATGGAAGGTGTTGTCCCT +
Preference number: 4 (lower is better)
Translates to: VTEASKFVSGLHYQIGFLMASHM*MEGVVP
Trigger: AGGGACAACACCTTCCATCCACATATGGGACGCCAT...AAGAAATCCTATCTGATAATGTAGCCCGCTGACGAATTTTGAAGCCTCGGTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp TGTCCAAGTCATATTCCGTCATACAACCAACTCCAAGGAACTCTAACTCACTTTGGGTGTGTTTGGTCATaGCGTCCCATATGTGGATGG +
Preference number: 4 (lower is better)
Translates to: CPSHIPSYNQLQGTLTHFGCVWS*RPICGW
Trigger: CCATCCACATATGGGACGCCATGACCAAACACACCC...AAAGTGAGTTAGAGTTCCTTGGAGTTGGTTGTATGACGGAATATGACTTGGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp AGAGGCTTCTGGCATTTTACAGACATCGCCACACAAATACACTGCAGTCGTCTCAACATAAGAGGCTTCTaGCATTTTACAGACATCGCC +
Preference number: 4 (lower is better)
Translates to: RGFWHFTDIATQIHCSRLNIRGF*HFTDIA
Trigger: GGCGATGTCTGTAAAATGCCAGAAGCCTCTTATGTT...GAGACGACTGCAGTGTATTTGTGTGGCGATGTCTGTAAAATGCCAGAAGCCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR CCA 90 bp CCAACTCCAAGGAACTCTAACTCACTTTATAATTTTGATTTACCAGCTATTCCTGGAGGCACCTCAGCATaGCCTCTGCAGTTGCTGGCT +
Preference number: 4 (lower is better)
Translates to: PTPRNSNSLYNFDLPAIPGGTSA*PLQLLA
Trigger: AGCCAGCAACTGCAGAGGCCATGCTGAGGTGCCTCC...AGGAATAGCTGGTAAATCAAAATTATAAAGTGAGTTAGAGTTCCTTGGAGTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp AAAGTTTTGATGCAAATTAAAAGCTACATATTGGTTAGGGTAACCGAGGCTTCAGGAGGCACCTCAGCATaGCCTCTGCAGTTGCTGGCT +
Preference number: 4 (lower is better)
Translates to: KVLMQIKSYILVRVTEASGGTSA*PLQLLA
Trigger: AGCCAGCAACTGCAGAGGCCATGCTGAGGTGCCTCC...TGAAGCCTCGGTTACCCTAACCAATATGTAGCTTTTAATTTGCATCAAAACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp AAAGTTTTGATGCAAATTAAAAGCTACATATTGGTTAGGGTAACCGAGGCTTCAGCGATAGCCTTGATTTaGCAGGCAACCCGGGTGAGC +
Preference number: 4 (lower is better)
Translates to: KVLMQIKSYILVRVTEASAIALI*QATRVS
Trigger: GCTCACCCGGGTTGCCTGTCAAATCAAGGCTATCGC...TGAAGCCTCGGTTACCCTAACCAATATGTAGCTTTTAATTTGCATCAAAACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356458.7
ENST00000673912.1
CDS-3UTR TCA 90 bp AATTTTCGTTCACTGACCAGAAGGACTAATAGGCGTCTATGTGCTCAGAACCACGTAATTCGCATCCACTaGGTTGATGTCAGTAACCTC +
Preference number: 4 (lower is better)
Translates to: NFRSLTRRTNRRLCAQNHVIRIH*VDVSNL
Trigger: GAGGTTACTGACATCAACTCAGTGGATGCGAATTAC...GTGGTTCTGAGCACATAGACGCCTATTAGTCCTTCTGGTCAGTGAACGAAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp CCAACTCCAAGGAACTCTAACTCACTTTATAATTTTGATTTACCAGCTATTCCTGTGCTCAACACCCACTaGAAGTCATGGGACCAGCGG +
Preference number: 4 (lower is better)
Translates to: PTPRNSNSLYNFDLPAIPVLNTH*KSWDQR
Trigger: CCGCTGGTCCCATGACTTTCAGTGGGTGTTGAGCAC...AGGAATAGCTGGTAAATCAAAATTATAAAGTGAGTTAGAGTTCCTTGGAGTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp ACTTGTCATCATAAGAGAAACGGATGTTCGTCACGTGAGCCGAGTGACCGAAGTGCTAGTCGACAATGCTaGTCTTTTAATGGCATAAGT +
Preference number: 4 (lower is better)
Translates to: TCHHKRNGCSSREPSDRSASRQC*SFNGIS
Trigger: ACTTATGCCATTAAAAGATCAGCATTGTCGACTAGC...ACTTCGGTCACTCGGCTCACGTGACGAACATCCGTTTCTCTTATGATGACAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR TCA 90 bp TTCAACAGTGTCAGCATTTACCACCAGGAAACTCCCATCGTTCAAGCCAACCGCATCATTTCTTTTCTGTaGTGGAAAGAGACCATGTCT +
Preference number: 4 (lower is better)
Translates to: FNSVSIYHQETPIVQANRIISFL*WKETMS
Trigger: AGACATGGTCTCTTTCCATCACAGAAAAGAAATGAT...GCGGTTGGCTTGAACGATGGGAGTTTCCTGGTGGTAAATGCTGACACTGTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000673655.1
ENST00000673746.1
ENST00000673916.1
ENST00000674035.1
CDS-3UTR TCA 90 bp GACCCTTCGCGGTTGTGGATTCTGCGTGAACACTTAGTACTGGATGTTCACCAAATCATTTCTTTTCTGTaGTGGAAAGAGACCATGTCT +
Preference number: 4 (lower is better)
Translates to: DPSRLWILREHLVLDVHQIISFL*WKETMS
Trigger: AGACATGGTCTCTTTCCATCACAGAAAAGAAATGAT...TTGGTGAACATCCAGTACTAAGTGTTCACGCAGAATCCACAACCGCGAAGGGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR TCA 90 bp TGTCAGCATTTACCACCAGGAAACTCCCATCGTTCAAGCCAACCGCTAAGGCTTATCATTTCTTTTCTGTaGTGGAAAGAGACCATGTCT +
Preference number: 4 (lower is better)
Translates to: CQHLPPGNSHRSSQPLRLIISFL*WKETMS
Trigger: AGACATGGTCTCTTTCCATCACAGAAAAGAAATGAT...AAGCCTTAGCGGTTGGCTTGAACGATGGGAGTTTCCTGGTGGTAAATGCTGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000673655.1
ENST00000673746.1
ENST00000673916.1
ENST00000674035.1
CDS-3UTR TCA 90 bp TACAAGATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACAGTGCCTTCCATTTCCCTaGTGCTCACAGCATAAATCT +
Preference number: 4 (lower is better)
Translates to: YKIGRHGYHSASPVTWLQCLPFP*CSQHKS
Trigger: AGATTTATGCTGTGAGCATCAGGGAAATGGAAGGCA...CTGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATCTTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp TACAAGATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACAGATCTCCCCTTCCATGTaGCCATCAATCAGGATGTTA +
Preference number: 4 (lower is better)
Translates to: YKIGRHGYHSASPVTWLQISPSM*PSIRML
Trigger: TAACATCCTGATTGATGGTCACATGGAAGGGGAGAT...CTGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATCTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp TTTCGTTCACTGACCAGAAGGACTAATAGGCGTCTATGTGCTCAGAACCACCAGTGTTCACCAACAAGATaGCAAACTCTCCATTCTTCA +
Preference number: 4 (lower is better)
Translates to: FRSLTRRTNRRLCAQNHQCSPTR*QTLHSS
Trigger: TGAAGAATGGAGAGTTTGTCATCTTGTTGGTGAACA...CTGGTGGTTCTGAGCACATAGACGCCTATTAGTCCTTCTGGTCAGTGAACGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp TGTCCAAGTCATATTCCGTCATACAACCAACTCCAAGGAACTCTAACTCACTTTCGTCTCCTCCAGTGCTaGCCACATACTTGTCATCAT +
Preference number: 4 (lower is better)
Translates to: CPSHIPSYNQLQGTLTHFRLLQC*PHTCHH
Trigger: ATGATGACAAGTATGTGGTCAGCACTGGAGGAGACG...AAAGTGAGTTAGAGTTCCTTGGAGTTGGTTGTATGACGGAATATGACTTGGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp GTAACCGAGGCTTCAAAATTCGTCAGCGGGCTACATTATCAGATAGGATTTCTTTCTCATAGACCTTCCTaGGCCTTTTTCCCCTTCCAT +
Preference number: 4 (lower is better)
Translates to: VTEASKFVSGLHYQIGFLSHRPS*AFFPFH
Trigger: ATGGAAGGGGAAAAAGGCTCAGGAAGGTCTATGAGA...AAGAAATCCTATCTGATAATGTAGCCCGCTGACGAATTTTGAAGCCTCGGTTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp TTGTGGCAAATTCAGCGGATTTTAAGTATTGACCCTTCGCGGTTGTGGATTCTGGTTGTGGATTCTGCGTaGACACTTAGTACTGGATGT +
Preference number: 4 (lower is better)
Translates to: LWQIQRILSIDPSRLWILVVDSA*TLSTGC
Trigger: ACATCCAGTACTAAGTGTTCACGCAGAATCCACAAC...CAGAATCCACAACCGCGAAGGGTCAATACTTAAAATCCGCTGAATTTGCCACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR GCA 90 bp CCAACTCCAAGGAACTCTAACTCACTTTATAATTTTGATTTACCAGCTATTCCTAAGAGCCGTCCTTCATaGCCAGGGCCAGCTGAGATC +
Preference number: 4 (lower is better)
Translates to: PTPRNSNSLYNFDLPAIPKSRPS*PGPAEI
Trigger: GATCTCAGCTGGCCCTGGGCATGAAGGACGGCTCTT...AGGAATAGCTGGTAAATCAAAATTATAAAGTGAGTTAGAGTTCCTTGGAGTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp GTACAAGATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACAATCATTGGATCCCACTaGAAGGTAAGAACCATCTGG +
Preference number: 4 (lower is better)
Translates to: VQDRQTWLSLCITSHMVTIIGSH*KVRTIW
Trigger: CCAGATGGTTCTTACCTTGCAGTGGGATCCAATGAT...TGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATCTTGTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp TGCTGCTCACCTTCCCATAAGCAGGTAACCGATGTCTTTCATTTAGGAAGCCTTTTTGAGGAAGGGCACTaGGTGGTTTTTCTCTTTACT +
Preference number: 4 (lower is better)
Translates to: CCSPSHKQVTDVFHLGSLFEEGH*VVFLFT
Trigger: AGTAAAGAGAAAAACCACGCAGTGCCCTTCCTCAAA...AAGGCTTCCTAAATGAAAGACATCGGTTACCTGCTTATGGGAAGGTGAGCAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp GTACAAGATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACAATACACGACAGCAACTaGAGCAATGTGGTAGACTAC +
Preference number: 4 (lower is better)
Translates to: VQDRQTWLSLCITSHMVTIHDSN*SNVVDY
Trigger: GTAGTCTACCACATTGCTGCAGTTGCTGTCGTGTAT...TGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATCTTGTAC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp TACAAGATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACAGCCCCCACCTGCTTGTTaGCAGAATTTGATGTGTTTT +
Preference number: 4 (lower is better)
Translates to: YKIGRHGYHSASPVTWLQPPPAC*QNLMCF
Trigger: AAAACACATCAAATTCTGGCAACAAGCAGGTGGGGG...CTGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATCTTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp GTACAAGATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACACCCCCACCTGCTTGTTaGCAGAATTTGATGTGTTTT +
Preference number: 4 (lower is better)
Translates to: VQDRQTWLSLCITSHMVTPPPAC*QNLMCF
Trigger: AAAACACATCAAATTCTGGCAACAAGCAGGTGGGGG...TGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATCTTGTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp AATTTTCGTTCACTGACCAGAAGGACTAATAGGCGTCTATGTGCTCAGAACCACATACTTCTTGAATCTTaGGTGCTGTCCCTTGACAGG +
Preference number: 4 (lower is better)
Translates to: NFRSLTRRTNRRLCAQNHILLES*VLSLDR
Trigger: CCTGTCAAGGGACAGCACGCAAGATTCAAGAAGTAT...GTGGTTCTGAGCACATAGACGCCTATTAGTCCTTCTGGTCAGTGAACGAAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp GATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACAGAAAACGTGATATTGTTCTTCTaGAGTTTCTCAGGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: DRQTWLSLCITSHMVTENVILFF*SFSGWG
Trigger: TCCCCAGCCTGAGAAACTGCAGAAGAACAATATCAC...GTTTTCTGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp ACTTGTCATCATAAGAGAAACGGATGTTCGTCACGTGAGCCGAGTGACCGAAGTCAGGAGCTTTCCAGTTaGACTGAAGTTGATGTAATT +
Preference number: 4 (lower is better)
Translates to: TCHHKRNGCSSREPSDRSQELSS*TEVDVI
Trigger: AATTACATCAACTTCAGTGCAACTGGAAAGCTCCTG...ACTTCGGTCACTCGGCTCACGTGACGAACATCCGTTTCTCTTATGATGACAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR GCA 90 bp TACAAGATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACAGAGCTTGGGATATCTTTaGAGTAGCCAATGCGGTTCA +
Preference number: 4 (lower is better)
Translates to: YKIGRHGYHSASPVTWLQSLGYL*SSQCGS
Trigger: TGAACCGCATTGGCTACTGCAAAGATATCCCAAGCT...CTGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATCTTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp TACAAGATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACAGCAGTTGTGTAACTTCTaGAGCGTTTTGAGCTTGTGC +
Preference number: 4 (lower is better)
Translates to: YKIGRHGYHSASPVTWLQQLCNF*SVLSLC
Trigger: GCACAAGCTCAAAACGCTGCAGAAGTTACACAACTG...CTGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATCTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp AATTTTCGTTCACTGACCAGAAGGACTAATAGGCGTCTATGTGCTCAGAACCACCTTCAATTCCTTTGCTaGTCACCTTCCCATAAGCAG +
Preference number: 4 (lower is better)
Translates to: NFRSLTRRTNRRLCAQNHLQFLC*SPSHKQ
Trigger: CTGCTTATGGGAAGGTGAGCAGCAAAGGAATTGAAG...GTGGTTCTGAGCACATAGACGCCTATTAGTCCTTCTGGTCAGTGAACGAAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp GCAGCCCACACAACTGGAAACTTTCAAAGGCACTTAATGGATATAAAACTCTGCAAACAGAATTGGGACTaGATAGGGACTCTACTGCGG +
Preference number: 4 (lower is better)
Translates to: AAHTTGNFQRHLMDIKLCKQNWD*IGTLLR
Trigger: CCGCAGTAGAGTCCCTATGCAGTCCCAATTCTGTTT...GCAGAGTTTTATATCCATTAAGTGCCTTTGAAAGTTTCCAGTTGTGTGGGCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp CCAACTCCAAGGAACTCTAACTCACTTTATAATTTTGATTTACCAGCTATTCCTCTTGGTAGGTCAGCCTaGCTGCTCGAATGGCTTGCG +
Preference number: 4 (lower is better)
Translates to: PTPRNSNSLYNFDLPAIPLGRSA*LLEWLA
Trigger: CGCAAGCCATTCGAGCAGGCAGGCTGACCTACCAAG...AGGAATAGCTGGTAAATCAAAATTATAAAGTGAGTTAGAGTTCCTTGGAGTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR GCA 90 bp CCAACTCCAAGGAACTCTAACTCACTTTATAATTTTGATTTACCAGCTATTCCTGTGTGGCACACACCATaGTTCCCCAGCATGCCAGCA +
Preference number: 4 (lower is better)
Translates to: PTPRNSNSLYNFDLPAIPVWHTP*FPSMPA
Trigger: TGCTGGCATGCTGGGGAAGCATGGTGTGTGCCACAC...AGGAATAGCTGGTAAATCAAAATTATAAAGTGAGTTAGAGTTCCTTGGAGTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR GCA 90 bp CTTCAACAGTGTCAGCATTTACCACCAGGAAACTCCCATCGTTCAAGCCAACCGCTCCAGGGTACTTTGTaGCAAATATCTTTAGTTTGT +
Preference number: 4 (lower is better)
Translates to: LQQCQHLPPGNSHRSSQPLQGTL*QISLVC
Trigger: ACAAACTAAAGATATTTGGCACAAAGTACCCTGGAG...CGGTTGGCTTGAACGATGGGAGTTTCCTGGTGGTAAATGCTGACACTGTTGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673916.1
CDS-3UTR CCA 90 bp GTAACCGAGGCTTCAAAATTCGTCAGCGGGCTACATTATCAGATAGGATTTCTTCCATATGCATATATATaGCTCCTTCCCGACTTGGCC +
Preference number: 4 (lower is better)
Translates to: VTEASKFVSGLHYQIGFLPYAYI*LLPDLA
Trigger: GGCCAAGTCGGGAAGGAGCCATATATATGCATATGG...AAGAAATCCTATCTGATAATGTAGCCCGCTGACGAATTTTGAAGCCTCGGTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp ATCACGGTTTTGGAGAGTCCAGATTATGGGAGCAGTTGTGTAACTTCTGCAGCGGCAACTCCATGTGTATaGACATCTTTAAGAAGAGAC +
Preference number: 4 (lower is better)
Translates to: ITVLESPDYGSSCVTSAAATPCV*TSLRRD
Trigger: GTCTCTTCTTAAAGATGTCCATACACATGGAGTTGC...CGCTGCAGAAGTTACACAACTGCTCCCATAATCTGGACTCTCCAAAACCGTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp GCAGCCCACACAACTGGAAACTTTCAAAGGCACTTAATGGATATAAAACTCTGCGCTAACCACTCTGTTTaGCTGATATGGATCCCAGGA +
Preference number: 4 (lower is better)
Translates to: AAHTTGNFQRHLMDIKLCANHSV*LIWIPG
Trigger: TCCTGGGATCCATATCAGCCAAACAGAGTGGTTAGC...GCAGAGTTTTATATCCATTAAGTGCCTTTGAAAGTTTCCAGTTGTGTGGGCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp TGTCCAAGTCATATTCCGTCATACAACCAACTCCAAGGAACTCTAACTCACTTTCTACTGGGCCATCATTaGATCCCACTGCAAGGTAAG +
Preference number: 4 (lower is better)
Translates to: CPSHIPSYNQLQGTLTHFLLGHH*IPLQGK
Trigger: CTTACCTTGCAGTGGGATCCAATGATGGCCCAGTAG...AAAGTGAGTTAGAGTTCCTTGGAGTTGGTTGTATGACGGAATATGACTTGGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp GCAGCCCACACAACTGGAAACTTTCAAAGGCACTTAATGGATATAAAACTCTGCAGCATAGACATCTACTaGGCCATCATTGGATCCCAC +
Preference number: 4 (lower is better)
Translates to: AAHTTGNFQRHLMDIKLCSIDIY*AIIGSH
Trigger: GTGGGATCCAATGATGGCCCAGTAGATGTCTATGCT...GCAGAGTTTTATATCCATTAAGTGCCTTTGAAAGTTTCCAGTTGTGTGGGCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp AGAGGCTTCTGGCATTTTACAGACATCGCCACACAAATACACTGCAGTCGTCTCGTGACATGTGCAGAATaGCCCACATACTTTCTAAAT +
Preference number: 4 (lower is better)
Translates to: RGFWHFTDIATQIHCSRLVTCAE*PTYFLN
Trigger: ATTTAGAAAGTATGTGGGCCATTCTGCACATGTCAC...GAGACGACTGCAGTGTATTTGTGTGGCGATGTCTGTAAAATGCCAGAAGCCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR CCA 90 bp CTTCCACATGGTTATTTCAATGCAAGATCCGATCAGCATGAAGAGTCTAGTACACACATAGTCCTTCACTaGATGGATGGTCAGGCTGAG +
Preference number: 4 (lower is better)
Translates to: LPHGYFNARSDQHEESSTHIVLH*MDGQAE
Trigger: CTCAGCCTGACCATCCATCCAGTGAAGGACTATGTG...TGTACTAGACTCTTCATGCTGATCGGATCTTGCATTGAAATAACCATGTGGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp GATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACAGAAAACTCCACAAAGTTATCATaGGATGCCACGGCAAGGTAT +
Preference number: 4 (lower is better)
Translates to: DRQTWLSLCITSHMVTENSTKLS*DATARY
Trigger: ATACCTTGCCGTGGCATCCCATGATAACTTTGTGGA...GTTTTCTGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp CCAACTCCAAGGAACTCTAACTCACTTTATAATTTTGATTTACCAGCTATTCCTACCAGCTTGCTCTCCTaGGTCCCCACAAACTCCCTG +
Preference number: 4 (lower is better)
Translates to: PTPRNSNSLYNFDLPAIPTSLLS*VPTNSL
Trigger: CAGGGAGTTTGTGGGGACCCAGGAGAGCAAGCTGGT...AGGAATAGCTGGTAAATCAAAATTATAAAGTGAGTTAGAGTTCCTTGGAGTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp AAAGTTTTGATGCAAATTAAAAGCTACATATTGGTTAGGGTAACCGAGGCTTCATGCAGTTTCTCAGGCTaGGGAGCTGCTCGGCTAACG +
Preference number: 4 (lower is better)
Translates to: KVLMQIKSYILVRVTEASCSFSG*GAARLT
Trigger: CGTTAGCCGAGCAGCTCCCCAGCCTGAGAAACTGCA...TGAAGCCTCGGTTACCCTAACCAATATGTAGCTTTTAATTTGCATCAAAACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp AGCCCACACAACTGGAAACTTTCAAAGGCACTTAATGGATATAAAACTCTGCAAGGGTGTGTTTGGTCATaGCGTCCCATATGTGGATGG +
Preference number: 4 (lower is better)
Translates to: SPHNWKLSKALNGYKTLQGCVWS*RPICGW
Trigger: CCATCCACATATGGGACGCCATGACCAAACACACCC...TTGCAGAGTTTTATATCCATTAAGTGCCTTTGAAAGTTTCCAGTTGTGTGGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp GATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACAGAAAACCTTGTCTGCATTTCGTaGCCAGATTCCAATGACTTC +
Preference number: 4 (lower is better)
Translates to: DRQTWLSLCITSHMVTENLVCIS*PDSNDF
Trigger: GAAGTCATTGGAATCTGGCCACGAAATGCAGACAAG...GTTTTCTGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp ACGGTTTTGGAGAGTCCAGATTATGGGAGCAGTTGTGTAACTTCTGCAGCGTTTAACATAAGAGGCTTCTaGCATTTTACAGACATCGCC +
Preference number: 4 (lower is better)
Translates to: TVLESPDYGSSCVTSAAFNIRGF*HFTDIA
Trigger: GGCGATGTCTGTAAAATGCCAGAAGCCTCTTATGTT...AAACGCTGCAGAAGTTACACAACTGCTCCCATAATCTGGACTCTCCAAAACCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp AAAGTTTTGATGCAAATTAAAAGCTACATATTGGTTAGGGTAACCGAGGCTTCATTTCCCAACGGCTGGTaGCAAGGAGGCACCTCAGCA +
Preference number: 4 (lower is better)
Translates to: KVLMQIKSYILVRVTEASFPNGW*QGGTSA
Trigger: TGCTGAGGTGCCTCCTTGCCACCAGCCGTTGGGAAA...TGAAGCCTCGGTTACCCTAACCAATATGTAGCTTTTAATTTGCATCAAAACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp AATTTTCGTTCACTGACCAGAAGGACTAATAGGCGTCTATGTGCTCAGAACCACCAAGATAGGCAGACATaGTTATCACTCTGCATCACC +
Preference number: 4 (lower is better)
Translates to: NFRSLTRRTNRRLCAQNHQDRQT*LSLCIT
Trigger: GGTGATGCAGAGTGATAACCATGTCTGCCTATCTTG...GTGGTTCTGAGCACATAGACGCCTATTAGTCCTTCTGGTCAGTGAACGAAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
3UTR CAA 72 bp ACTGTGTGTTCAGAAGAACCAACGGCTAAGAATCGGTaGTCTGGGCTGATTCTGATATCTTGGATAGCAGAT +
Preference number: 4 (lower is better)
Translates to: TVCSEEPTAKNR*SGLILISWIAD
Trigger: ATCTGCTATCCAAGATATCAGAATCAGCCCAGACAACCGATTCTTAGCCGTTGGTTCTTCTGAACACACAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR TCA 90 bp TTTCGTTCACTGACCAGAAGGACTAATAGGCGTCTATGTGCTCAGAACCACCAGCTTCTTTTCGATCTTTaGTGTGAACTACTTCTGTCA +
Preference number: 4 (lower is better)
Translates to: FRSLTRRTNRRLCAQNHQLLFDL*CELLLS
Trigger: TGACAGAAGTAGTTCACATCAAAGATCGAAAAGAAG...CTGGTGGTTCTGAGCACATAGACGCCTATTAGTCCTTCTGGTCAGTGAACGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp ACGGTTTTGGAGAGTCCAGATTATGGGAGCAGTTGTGTAACTTCTGCAGCGTTTGCTAGTCGACAATGCTaGTCTTTTAATGGCATAAGT +
Preference number: 4 (lower is better)
Translates to: TVLESPDYGSSCVTSAAFASRQC*SFNGIS
Trigger: ACTTATGCCATTAAAAGATCAGCATTGTCGACTAGC...AAACGCTGCAGAAGTTACACAACTGCTCCCATAATCTGGACTCTCCAAAACCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp AATTTTCGTTCACTGACCAGAAGGACTAATAGGCGTCTATGTGCTCAGAACCACAGTGATGGCACGAATTaGAGGGTTATCTTCCAAAAG +
Preference number: 4 (lower is better)
Translates to: NFRSLTRRTNRRLCAQNHSDGTN*RVIFQK
Trigger: CTTTTGGAAGATAACCCTTCAATTCGTGCCATCACT...GTGGTTCTGAGCACATAGACGCCTATTAGTCCTTCTGGTCAGTGAACGAAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp CCAACTCCAAGGAACTCTAACTCACTTTATAATTTTGATTTACCAGCTATTCCTCGTTGCTGGCAGAGATaGAGAGGTCCTTGGAAGGGT +
Preference number: 4 (lower is better)
Translates to: PTPRNSNSLYNFDLPAIPRCWQR*RGPWKG
Trigger: ACCCTTCCAAGGACCTCTTCATCTCTGCCAGCAACG...AGGAATAGCTGGTAAATCAAAATTATAAAGTGAGTTAGAGTTCCTTGGAGTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp AGCCCACACAACTGGAAACTTTCAAAGGCACTTAATGGATATAAAACTCTGCAACAAAGTCATCTCCTGTaGCAATGTTCAGGCCAGCGT +
Preference number: 4 (lower is better)
Translates to: SPHNWKLSKALNGYKTLQQSHLL*QCSGQR
Trigger: ACGCTGGCCTGAACATTGTCACAGGAGATGACTTTG...TTGCAGAGTTTTATATCCATTAAGTGCCTTTGAAAGTTTCCAGTTGTGTGGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp ACGGTTTTGGAGAGTCCAGATTATGGGAGCAGTTGTGTAACTTCTGCAGCGTTTTTTGTGGGTTTGGCATaGAACACAATGAAAACCCAT +
Preference number: 4 (lower is better)
Translates to: TVLESPDYGSSCVTSAAFFVGLA*NTMKTH
Trigger: ATGGGTTTTCATTGTGTTTCATGCCAAACCCACAAA...AAACGCTGCAGAAGTTACACAACTGCTCCCATAATCTGGACTCTCCAAAACCGT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp AGCAGCCCACACAACTGGAAACTTTCAAAGGCACTTAATGGATATAAAACTCTGTCTCATAGACCTTCCTaGGCCTTTTTCCCCTTCCAT +
Preference number: 4 (lower is better)
Translates to: SSPHNWKLSKALNGYKTLSHRPS*AFFPFH
Trigger: ATGGAAGGGGAAAAAGGCTCAGGAAGGTCTATGAGA...CAGAGTTTTATATCCATTAAGTGCCTTTGAAAGTTTCCAGTTGTGTGGGCTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp AGCATATGTTTACAGCTGTATTGCTTCAAAACTGAAGATGAGAGGAGCAAGGGGCGGCGGGATTTATTCTaGGATAGCCTTGATTTGACA +
Preference number: 4 (lower is better)
Translates to: SICLQLYCFKTEDERSKGRRDLF*DSLDLT
Trigger: TGTCAAATCAAGGCTATCGCAGAATAAATCCCGCCG...CCCCTTGCTCCTCTCATCTTCAGTTTTGAAGCAATACAGCTGTAAACATATGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR GCA 90 bp GCAGCCCACACAACTGGAAACTTTCAAAGGCACTTAATGGATATAAAACTCTGCATACACGACAGCAACTaGAGCAATGTGGTAGACTAC +
Preference number: 4 (lower is better)
Translates to: AAHTTGNFQRHLMDIKLCIHDSN*SNVVDY
Trigger: GTAGTCTACCACATTGCTGCAGTTGCTGTCGTGTAT...GCAGAGTTTTATATCCATTAAGTGCCTTTGAAAGTTTCCAGTTGTGTGGGCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp GATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACAGAAAACAAAGCCCTTATCCAGTaGATACATAGCAAACACAGG +
Preference number: 4 (lower is better)
Translates to: DRQTWLSLCITSHMVTENKALIQ*IHSKHR
Trigger: CCTGTGTTTGCTATGTATGCACTGGATAAGGGCTTT...GTTTTCTGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp AAAGTTTTGATGCAAATTAAAAGCTACATATTGGTTAGGGTAACCGAGGCTTCAACTGCCAGCATACGGTaGTGGGCAGATAGTTCCCAG +
Preference number: 4 (lower is better)
Translates to: KVLMQIKSYILVRVTEASTASIR*WADSSQ
Trigger: CTGGGAACTATCTGCCCAGCACCGTATGCTGGCAGT...TGAAGCCTCGGTTACCCTAACCAATATGTAGCTTTTAATTTGCATCAAAACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp GATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACAGAAAACAAAGTTATCATGGGATaGCACGGCAAGGTATTTTCC +
Preference number: 4 (lower is better)
Translates to: DRQTWLSLCITSHMVTENKVIMG*HGKVFS
Trigger: GGAAAATACCTTGCCGTGGCATCCCATGATAACTTT...GTTTTCTGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp ATCACGGTTTTGGAGAGTCCAGATTATGGGAGCAGTTGTGTAACTTCTGCAGCGGCACCTGAATTCACTTaGAATAATTTTCCTCTAGAG +
Preference number: 4 (lower is better)
Translates to: ITVLESPDYGSSCVTSAAAPEFT*NNFPLE
Trigger: CTCTAGAGGAAAATTATTGCAAGTGAATTCAGGTGC...CGCTGCAGAAGTTACACAACTGCTCCCATAATCTGGACTCTCCAAAACCGTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp GTACAAGATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACAGAAGGTCTTATTATATaGCGTTTGCCTCTTGGAGCT +
Preference number: 4 (lower is better)
Translates to: VQDRQTWLSLCITSHMVTEGLII*RLPLGA
Trigger: AGCTCCAAGAGGCAAACGGCATATAATAAGACCTTC...TGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATCTTGTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp TACAAGATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACAGTTCTTGAATCTTGCGTaGTGTCCCTTGACAGGATAT +
Preference number: 4 (lower is better)
Translates to: YKIGRHGYHSASPVTWLQFLNLA*CPLTGY
Trigger: ATATCCTGTCAAGGGACAGCACGCAAGATTCAAGAA...CTGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATCTTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp AGCCCACACAACTGGAAACTTTCAAAGGCACTTAATGGATATAAAACTCTGCAAAGCACAGAGTCATTGTaGAGCCACCTCACGTTAGTG +
Preference number: 4 (lower is better)
Translates to: SPHNWKLSKALNGYKTLQSTESL*SHLTLV
Trigger: CACTAACGTGAGGTGGCTGCACAATGACTCTGTGCT...TTGCAGAGTTTTATATCCATTAAGTGCCTTTGAAAGTTTCCAGTTGTGTGGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp AAAGTTTTGATGCAAATTAAAAGCTACATATTGGTTAGGGTAACCGAGGCTTCAAGAGGTTCTGAACGATaGCAGCCGCTGCTGTGTGGA +
Preference number: 4 (lower is better)
Translates to: KVLMQIKSYILVRVTEASRGSER*QPLLCG
Trigger: TCCACACAGCAGCGGCTGGCATCGTTCAGAACCTCT...TGAAGCCTCGGTTACCCTAACCAATATGTAGCTTTTAATTTGCATCAAAACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp CTTCCACATGGTTATTTCAATGCAAGATCCGATCAGCATGAAGAGTCTAGTACATTTCTGTACTTGGGGTaGTGGTTCACTGTGAGACAG +
Preference number: 4 (lower is better)
Translates to: LPHGYFNARSDQHEESSTFLYLG*WFTVRQ
Trigger: CTGTCTCACAGTGAACCAGCACCCCAAGTACAGAAA...TGTACTAGACTCTTCATGCTGATCGGATCTTGCATTGAAATAACCATGTGGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp AGCAATCTCAATGTTTCTTTCTCATTTCGCAAGCATATGTTTACAGCTGTATTGCCGACAGATACAAACTaGGTGTCTGAGTCGGGGCGA +
Preference number: 4 (lower is better)
Translates to: SNLNVSFSFRKHMFTAVLPTDTN*VSESGR
Trigger: TCGCCCCGACTCAGACACGCAGTTTGTATCTGTCGG...CAATACAGCTGTAAACATATGCTTGCGAAATGAGAAAGAAACATTGAGATTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR GCA 90 bp GTAACCGAGGCTTCAAAATTCGTCAGCGGGCTACATTATCAGATAGGATTTCTTCAGTTGTGTAACTTCTaGAGCGTTTTGAGCTTGTGC +
Preference number: 4 (lower is better)
Translates to: VTEASKFVSGLHYQIGFLQLCNF*SVLSLC
Trigger: GCACAAGCTCAAAACGCTGCAGAAGTTACACAACTG...AAGAAATCCTATCTGATAATGTAGCCCGCTGACGAATTTTGAAGCCTCGGTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp GTAACCGAGGCTTCAAAATTCGTCAGCGGGCTACATTATCAGATAGGATTTCTTCTTCAATTCCTTTGCTaGTCACCTTCCCATAAGCAG +
Preference number: 4 (lower is better)
Translates to: VTEASKFVSGLHYQIGFLLQFLC*SPSHKQ
Trigger: CTGCTTATGGGAAGGTGAGCAGCAAAGGAATTGAAG...AAGAAATCCTATCTGATAATGTAGCCCGCTGACGAATTTTGAAGCCTCGGTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp AATTTTCGTTCACTGACCAGAAGGACTAATAGGCGTCTATGTGCTCAGAACCACACATGGTTATCACTCTaGATCACCAGTCACATGGTT +
Preference number: 4 (lower is better)
Translates to: NFRSLTRRTNRRLCAQNHTWLSL*ITSHMV
Trigger: AACCATGTGACTGGTGATGCAGAGTGATAACCATGT...GTGGTTCTGAGCACATAGACGCCTATTAGTCCTTCTGGTCAGTGAACGAAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp TTGTGTGCAGGGGAAGACAGGGTACCTTTATTTTCTCAGAAACTCTTCAATCAATCTCTGGGCAAACTCTaGACTAAAGCGCCTACAGAA +
Preference number: 4 (lower is better)
Translates to: LCAGEDRVPLFSQKLFNQSLGKL*TKAPTE
Trigger: TTCTGTAGGCGCTTTAGTGCAGAGTTTGCCCAGAGA...TTGATTGAAGAGTTTCTGAGAAAATAAAGGTACCCTGTCTTCCCCTGCACACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR GCA 90 bp AGAGGCTTCTGGCATTTTACAGACATCGCCACACAAATACACTGCAGTCGTCTCACAGAAATGAAAGAGTaGACCAGTCTACAAATTCAG +
Preference number: 4 (lower is better)
Translates to: RGFWHFTDIATQIHCSRLTEMKE*TSLQIQ
Trigger: CTGAATTTGTAGACTGGTGCACTCTTTCATTTCTGT...GAGACGACTGCAGTGTATTTGTGTGGCGATGTCTGTAAAATGCCAGAAGCCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR CCA 90 bp AAAGTTTTGATGCAAATTAAAAGCTACATATTGGTTAGGGTAACCGAGGCTTCAGGCTCCTTCCCGACTTaGCCAGTTGCAACGAGAGTT +
Preference number: 4 (lower is better)
Translates to: KVLMQIKSYILVRVTEASGSFPT*PVATRV
Trigger: AACTCTCGTTGCAACTGGCCAAGTCGGGAAGGAGCC...TGAAGCCTCGGTTACCCTAACCAATATGTAGCTTTTAATTTGCATCAAAACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp GTAACCGAGGCTTCAAAATTCGTCAGCGGGCTACATTATCAGATAGGATTTCTTATGCAAGGCAAAGGATaGTCTGAAGATCCCCTGTTT +
Preference number: 4 (lower is better)
Translates to: VTEASKFVSGLHYQIGFLMQGKG*SEDPLF
Trigger: AAACAGGGGATCTTCAGACCATCCTTTGCCTTGCAT...AAGAAATCCTATCTGATAATGTAGCCCGCTGACGAATTTTGAAGCCTCGGTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp ACGGTTTTGGAGAGTCCAGATTATGGGAGCAGTTGTGTAACTTCTGCAGCGTTTGTGACATGTGCAGAATaGCCCACATACTTTCTAAAT +
Preference number: 4 (lower is better)
Translates to: TVLESPDYGSSCVTSAAFVTCAE*PTYFLN
Trigger: ATTTAGAAAGTATGTGGGCCATTCTGCACATGTCAC...AAACGCTGCAGAAGTTACACAACTGCTCCCATAATCTGGACTCTCCAAAACCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp GCAGCCCACACAACTGGAAACTTTCAAAGGCACTTAATGGATATAAAACTCTGCGTTGCTGACACCTTCTaGAATAAACCTCCACTGGAA +
Preference number: 4 (lower is better)
Translates to: AAHTTGNFQRHLMDIKLCVADTF*NKPPLE
Trigger: TTCCAGTGGAGGTTTATTCCAGAAGGTGTCAGCAAC...GCAGAGTTTTATATCCATTAAGTGCCTTTGAAAGTTTCCAGTTGTGTGGGCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp ACGGTTTTGGAGAGTCCAGATTATGGGAGCAGTTGTGTAACTTCTGCAGCGTTTAACAAGCAGTGTCATTaGGCCACTCTTATCAATTTC +
Preference number: 4 (lower is better)
Translates to: TVLESPDYGSSCVTSAAFNKQCH*ATLINF
Trigger: GAAATTGATAAGAGTGGCCCAATGACACTGCTTGTT...AAACGCTGCAGAAGTTACACAACTGCTCCCATAATCTGGACTCTCCAAAACCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp AAAGTTTTGATGCAAATTAAAAGCTACATATTGGTTAGGGTAACCGAGGCTTCAGCCAGCATACGGTGCTaGGCAGATAGTTCCCAGATG +
Preference number: 4 (lower is better)
Translates to: KVLMQIKSYILVRVTEASASIRC*ADSSQM
Trigger: CATCTGGGAACTATCTGCCCAGCACCGTATGCTGGC...TGAAGCCTCGGTTACCCTAACCAATATGTAGCTTTTAATTTGCATCAAAACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp CTTCCACATGGTTATTTCAATGCAAGATCCGATCAGCATGAAGAGTCTAGTACATATATCGCTATGTGCTaGCCAGATTCCCTCACAGGT +
Preference number: 4 (lower is better)
Translates to: LPHGYFNARSDQHEESSTYIAMC*PDSLTG
Trigger: ACCTGTGAGGGAATCTGGCCAGCACATAGCGATATA...TGTACTAGACTCTTCATGCTGATCGGATCTTGCATTGAAATAACCATGTGGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp ACGGTTTTGGAGAGTCCAGATTATGGGAGCAGTTGTGTAACTTCTGCAGCGTTTCAGCATAAATCTTGGTaGTGTAGTCAATGGCCTTTT +
Preference number: 4 (lower is better)
Translates to: TVLESPDYGSSCVTSAAFQHKSW*CSQWPF
Trigger: AAAAGGCCATTGACTACACCACCAAGATTTATGCTG...AAACGCTGCAGAAGTTACACAACTGCTCCCATAATCTGGACTCTCCAAAACCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp GTACAAGATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACATCACAGCATAAATCTTaGTGGTGTAGTCAATGGCCT +
Preference number: 4 (lower is better)
Translates to: VQDRQTWLSLCITSHMVTSQHKS*WCSQWP
Trigger: AGGCCATTGACTACACCACCAAGATTTATGCTGTGA...TGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATCTTGTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp AGCCCACACAACTGGAAACTTTCAAAGGCACTTAATGGATATAAAACTCTGCAAATGGCGTCCCATATGTaGATGGAAGGTGTTGTCCCT +
Preference number: 4 (lower is better)
Translates to: SPHNWKLSKALNGYKTLQMASHM*MEGVVP
Trigger: AGGGACAACACCTTCCATCCACATATGGGACGCCAT...TTGCAGAGTTTTATATCCATTAAGTGCCTTTGAAAGTTTCCAGTTGTGTGGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp AAAGTTTTGATGCAAATTAAAAGCTACATATTGGTTAGGGTAACCGAGGCTTCAGGAAGCACCGCAGCATaGAGAGGGTGTGTTTGGTCA +
Preference number: 4 (lower is better)
Translates to: KVLMQIKSYILVRVTEASGSTAA*RGCVWS
Trigger: TGACCAAACACACCCTCTCCATGCTGCGGTGCTTCC...TGAAGCCTCGGTTACCCTAACCAATATGTAGCTTTTAATTTGCATCAAAACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp ACGGTTTTGGAGAGTCCAGATTATGGGAGCAGTTGTGTAACTTCTGCAGCGTTTCTGATTCTGATATCTTaGATAGCAGATTTCCGGTCT +
Preference number: 4 (lower is better)
Translates to: TVLESPDYGSSCVTSAAFLILIS*IADFRS
Trigger: AGACCGGAAATCTGCTATCCAAGATATCAGAATCAG...AAACGCTGCAGAAGTTACACAACTGCTCCCATAATCTGGACTCTCCAAAACCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp TGTCCAAGTCATATTCCGTCATACAACCAACTCCAAGGAACTCTAACTCACTTTGTGGCATCACGGTTTTaGAGAGTCCAGATTATGGGA +
Preference number: 4 (lower is better)
Translates to: CPSHIPSYNQLQGTLTHFVASRF*RVQIMG
Trigger: TCCCATAATCTGGACTCTCCAAAACCGTGATGCCAC...AAAGTGAGTTAGAGTTCCTTGGAGTTGGTTGTATGACGGAATATGACTTGGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp GTAACCGAGGCTTCAAAATTCGTCAGCGGGCTACATTATCAGATAGGATTTCTTACCAAGGTGCAGCCTTaGGTTACCCTCATTTATCTT +
Preference number: 4 (lower is better)
Translates to: VTEASKFVSGLHYQIGFLTKVQP*VTLIYL
Trigger: AAGATAAATGAGGGTAACCCAAGGCTGCACCTTGGT...AAGAAATCCTATCTGATAATGTAGCCCGCTGACGAATTTTGAAGCCTCGGTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp TTTCGTTCACTGACCAGAAGGACTAATAGGCGTCTATGTGCTCAGAACCACCAGTTACCAGCTATTCCTTaGGTTTACAATTTGTTCTGC +
Preference number: 4 (lower is better)
Translates to: FRSLTRRTNRRLCAQNHQLPAIP*VYNLFC
Trigger: GCAGAACAAATTGTAAACCCAAGGAATAGCTGGTAA...CTGGTGGTTCTGAGCACATAGACGCCTATTAGTCCTTCTGGTCAGTGAACGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp GTAACCGAGGCTTCAAAATTCGTCAGCGGGCTACATTATCAGATAGGATTTCTTCAAGATAGGCAGACATaGTTATCACTCTGCATCACC +
Preference number: 4 (lower is better)
Translates to: VTEASKFVSGLHYQIGFLQDRQT*LSLCIT
Trigger: GGTGATGCAGAGTGATAACCATGTCTGCCTATCTTG...AAGAAATCCTATCTGATAATGTAGCCCGCTGACGAATTTTGAAGCCTCGGTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp AGCATATGTTTACAGCTGTATTGCTTCAAAACTGAAGATGAGAGGAGCAAGGGGATCACCACTGAAGAATaGGTAGACAGCACATCTCTG +
Preference number: 4 (lower is better)
Translates to: SICLQLYCFKTEDERSKGITTEE*VDSTSL
Trigger: CAGAGATGTGCTGTCTACCCATTCTTCAGTGGTGAT...CCCCTTGCTCCTCTCATCTTCAGTTTTGAAGCAATACAGCTGTAAACATATGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR CCA 90 bp AGCCCACACAACTGGAAACTTTCAAAGGCACTTAATGGATATAAAACTCTGCAACTGCTTAGAGTGTGCTaGGGAGAAACTTGCTGTCAG +
Preference number: 4 (lower is better)
Translates to: SPHNWKLSKALNGYKTLQLLRVC*GETCCQ
Trigger: CTGACAGCAAGTTTCTCCCCAGCACACTCTAAGCAG...TTGCAGAGTTTTATATCCATTAAGTGCCTTTGAAAGTTTCCAGTTGTGTGGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673912.1
3UTR CAA 72 bp CAAATTCAGCGGATTTTAAGTATTGACCCTTCGCGGTaGTGGATTCTGCGTGAACACTTAGTACTGGATGTT +
Preference number: 4 (lower is better)
Translates to: QIQRILSIDPSR*WILREHLVLDV
Trigger: AACATCCAGTACTAAGTGTTCACGCAGAATCCACAACCGCGAAGGGTCAATACTTAAAATCCGCTGAATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR TCA 90 bp AATTTTCGTTCACTGACCAGAAGGACTAATAGGCGTCTATGTGCTCAGAACCACTTTTGGTTATTGGTTTaGAATCAGTGTCCCACAGTC +
Preference number: 4 (lower is better)
Translates to: NFRSLTRRTNRRLCAQNHFWLLV*NQCPTV
Trigger: GACTGTGGGACACTGATTTCAAACCAATAACCAAAA...GTGGTTCTGAGCACATAGACGCCTATTAGTCCTTCTGGTCAGTGAACGAAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp ACGGTTTTGGAGAGTCCAGATTATGGGAGCAGTTGTGTAACTTCTGCAGCGTTTCTTCTTTTCGATCTTTaGTGTGAACTACTTCTGTCA +
Preference number: 4 (lower is better)
Translates to: TVLESPDYGSSCVTSAAFLLFDL*CELLLS
Trigger: TGACAGAAGTAGTTCACATCAAAGATCGAAAAGAAG...AAACGCTGCAGAAGTTACACAACTGCTCCCATAATCTGGACTCTCCAAAACCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp GCAGCCCACACAACTGGAAACTTTCAAAGGCACTTAATGGATATAAAACTCTGCCTCTATAACCGTGTATaGACTGGAGTTTCAAGCTGT +
Preference number: 4 (lower is better)
Translates to: AAHTTGNFQRHLMDIKLCLYNRV*TGVSSC
Trigger: ACAGCTTGAAACTCCAGTTCATACACGGTTATAGAG...GCAGAGTTTTATATCCATTAAGTGCCTTTGAAAGTTTCCAGTTGTGTGGGCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp GTAACCGAGGCTTCAAAATTCGTCAGCGGGCTACATTATCAGATAGGATTTCTTCTCTATAACCGTGTATaGACTGGAGTTTCAAGCTGT +
Preference number: 4 (lower is better)
Translates to: VTEASKFVSGLHYQIGFLLYNRV*TGVSSC
Trigger: ACAGCTTGAAACTCCAGTTCATACACGGTTATAGAG...AAGAAATCCTATCTGATAATGTAGCCCGCTGACGAATTTTGAAGCCTCGGTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp GTACAAGATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACATATCTTCTCGATCTCTaGAGGTCTTATTATATGCCG +
Preference number: 4 (lower is better)
Translates to: VQDRQTWLSLCITSHMVTYLLDL*RSYYMP
Trigger: CGGCATATAATAAGACCTTCAGAGATCGAGAAGATA...TGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATCTTGTAC
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp AAAGTTTTGATGCAAATTAAAAGCTACATATTGGTTAGGGTAACCGAGGCTTCAGCCCCACATACTTCTTaGATCTTGCGTGCTGTCCCT +
Preference number: 4 (lower is better)
Translates to: KVLMQIKSYILVRVTEASAPHTS*ILRAVP
Trigger: AGGGACAGCACGCAAGATTCAAGAAGTATGTGGGGC...TGAAGCCTCGGTTACCCTAACCAATATGTAGCTTTTAATTTGCATCAAAACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp AGCAGCCCACACAACTGGAAACTTTCAAAGGCACTTAATGGATATAAAACTCTGTGCCTTCCATTTCCCTaGTGCTCACAGCATAAATCT +
Preference number: 4 (lower is better)
Translates to: SSPHNWKLSKALNGYKTLCLPFP*CSQHKS
Trigger: AGATTTATGCTGTGAGCATCAGGGAAATGGAAGGCA...CAGAGTTTTATATCCATTAAGTGCCTTTGAAAGTTTCCAGTTGTGTGGGCTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp AGCAGCCCACACAACTGGAAACTTTCAAAGGCACTTAATGGATATAAAACTCTGATCTCCCCTTCCATGTaGCCATCAATCAGGATGTTA +
Preference number: 4 (lower is better)
Translates to: SSPHNWKLSKALNGYKTLISPSM*PSIRML
Trigger: TAACATCCTGATTGATGGTCACATGGAAGGGGAGAT...CAGAGTTTTATATCCATTAAGTGCCTTTGAAAGTTTCCAGTTGTGTGGGCTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp AATTTTCGTTCACTGACCAGAAGGACTAATAGGCGTCTATGTGCTCAGAACCACTGTTCACCAACAAGATaGCAAACTCTCCATTCTTCA +
Preference number: 4 (lower is better)
Translates to: NFRSLTRRTNRRLCAQNHCSPTR*QTLHSS
Trigger: TGAAGAATGGAGAGTTTGTCATCTTGTTGGTGAACA...GTGGTTCTGAGCACATAGACGCCTATTAGTCCTTCTGGTCAGTGAACGAAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp AATTTTCGTTCACTGACCAGAAGGACTAATAGGCGTCTATGTGCTCAGAACCACTTTGTGGGTTTGGCATaGAACACAATGAAAACCCAT +
Preference number: 4 (lower is better)
Translates to: NFRSLTRRTNRRLCAQNHFVGLA*NTMKTH
Trigger: ATGGGTTTTCATTGTGTTTCATGCCAAACCCACAAA...GTGGTTCTGAGCACATAGACGCCTATTAGTCCTTCTGGTCAGTGAACGAAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp AGCAGCCCACACAACTGGAAACTTTCAAAGGCACTTAATGGATATAAAACTCTGCCTGAAGCAATCAAATaGAGTCACCTCAACTCCACT +
Preference number: 4 (lower is better)
Translates to: SSPHNWKLSKALNGYKTLPEAIK*SHLNST
Trigger: AGTGGAGTTGAGGTGACTTCATTTGATTGCTTCAGG...CAGAGTTTTATATCCATTAAGTGCCTTTGAAAGTTTCCAGTTGTGTGGGCTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp AATTTTCGTTCACTGACCAGAAGGACTAATAGGCGTCTATGTGCTCAGAACCACACCTTTTCTCTAAACTaGCAAATGCAAGTAGCCAGT +
Preference number: 4 (lower is better)
Translates to: NFRSLTRRTNRRLCAQNHTFSLN*QMQVAS
Trigger: ACTGGCTACTTGCATTTGTCAGTTTAGAGAAAAGGT...GTGGTTCTGAGCACATAGACGCCTATTAGTCCTTCTGGTCAGTGAACGAAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp TGCTGCTCACCTTCCCATAAGCAGGTAACCGATGTCTTTCATTTAGGAAGCCTTCAAATAAGTTTTTCATaGCACACGGACACTATTGCT +
Preference number: 4 (lower is better)
Translates to: CCSPSHKQVTDVFHLGSLQISFS*HTDTIA
Trigger: AGCAATAGTGTCCGTGTGTCATGAAAAACTTATTTG...AAGGCTTCCTAAATGAAAGACATCGGTTACCTGCTTATGGGAAGGTGAGCAGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp GTACAAGATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACATATTATAATCACCACTaGAGAATGGGTAGACAGCAC +
Preference number: 4 (lower is better)
Translates to: VQDRQTWLSLCITSHMVTYYNHH*RMGRQH
Trigger: GTGCTGTCTACCCATTCTTCAGTGGTGATTATAATA...TGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATCTTGTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR TCA 90 bp GTACAAGATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACAGAACTAAAACAGAAATaGAAGAGTGCACCAGTCTAC +
Preference number: 4 (lower is better)
Translates to: VQDRQTWLSLCITSHMVTELKQK*KSAPVY
Trigger: GTAGACTGGTGCACTCTTTCATTTCTGTTTTAGTTC...TGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATCTTGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR GCA 90 bp CTTCCACATGGTTATTTCAATGCAAGATCCGATCAGCATGAAGAGTCTAGTACATCCTCCAGTCCCAAATaGAGACTGTGTTTTTGGCAT +
Preference number: 4 (lower is better)
Translates to: LPHGYFNARSDQHEESSTSSSPK*RLCFWH
Trigger: ATGCCAAAAACACAGTCTGCATTTGGGACTGGAGGA...TGTACTAGACTCTTCATGCTGATCGGATCTTGCATTGAAATAACCATGTGGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp AGCAGCCCACACAACTGGAAACTTTCAAAGGCACTTAATGGATATAAAACTCTGATCATTGGATCCCACTaGAAGGTAAGAACCATCTGG +
Preference number: 4 (lower is better)
Translates to: SSPHNWKLSKALNGYKTLIIGSH*KVRTIW
Trigger: CCAGATGGTTCTTACCTTGCAGTGGGATCCAATGAT...CAGAGTTTTATATCCATTAAGTGCCTTTGAAAGTTTCCAGTTGTGTGGGCTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp GCAGCCCACACAACTGGAAACTTTCAAAGGCACTTAATGGATATAAAACTCTGCTTTGAGGAAGGGCACTaGGTGGTTTTTCTCTTTACT +
Preference number: 4 (lower is better)
Translates to: AAHTTGNFQRHLMDIKLCFEEGH*VVFLFT
Trigger: AGTAAAGAGAAAAACCACGCAGTGCCCTTCCTCAAA...GCAGAGTTTTATATCCATTAAGTGCCTTTGAAAGTTTCCAGTTGTGTGGGCTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp CCAACTCCAAGGAACTCTAACTCACTTTATAATTTTGATTTACCAGCTATTCCTTACAGCCTCTGGGAGTaGTGCTGCCGATTATACACG +
Preference number: 4 (lower is better)
Translates to: PTPRNSNSLYNFDLPAIPYSLWE*CCRLYT
Trigger: CGTGTATAATCGGCAGCAGCACTCCCAGAGGCTGTA...AGGAATAGCTGGTAAATCAAAATTATAAAGTGAGTTAGAGTTCCTTGGAGTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp AGCAATCTCAATGTTTCTTTCTCATTTCGCAAGCATATGTTTACAGCTGTATTGTACAGCCTCTGGGAGTaGTGCTGCCGATTATACACG +
Preference number: 4 (lower is better)
Translates to: SNLNVSFSFRKHMFTAVLYSLWE*CCRLYT
Trigger: CGTGTATAATCGGCAGCAGCACTCCCAGAGGCTGTA...CAATACAGCTGTAAACATATGCTTGCGAAATGAGAAAGAAACATTGAGATTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR GCA 90 bp CCAACTCCAAGGAACTCTAACTCACTTTATAATTTTGATTTACCAGCTATTCCTATCATCGCTCACTGTTaGACAGATGGGCAGGAGAGG +
Preference number: 4 (lower is better)
Translates to: PTPRNSNSLYNFDLPAIPIIAHC*TDGQER
Trigger: CCTCTCCTGCCCATCTGTGCAACAGTGAGCGATGAT...AGGAATAGCTGGTAAATCAAAATTATAAAGTGAGTTAGAGTTCCTTGGAGTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp AAAGTTTTGATGCAAATTAAAAGCTACATATTGGTTAGGGTAACCGAGGCTTCATTTGAGTTTCCGTACTaGCAGCATACGGTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: KVLMQIKSYILVRVTEASFEFPY*QHTVLG
Trigger: GCCCAGCACCGTATGCTGGCAGTACGGAAACTCAAA...TGAAGCCTCGGTTACCCTAACCAATATGTAGCTTTTAATTTGCATCAAAACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp GTAACCGAGGCTTCAAAATTCGTCAGCGGGCTACATTATCAGATAGGATTTCTTAAAGTTATCATGGGATaGCACGGCAAGGTATTTTCC +
Preference number: 4 (lower is better)
Translates to: VTEASKFVSGLHYQIGFLKVIMG*HGKVFS
Trigger: GGAAAATACCTTGCCGTGGCATCCCATGATAACTTT...AAGAAATCCTATCTGATAATGTAGCCCGCTGACGAATTTTGAAGCCTCGGTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp TTTCGTTCACTGACCAGAAGGACTAATAGGCGTCTATGTGCTCAGAACCACCAGTTATTATATGCCGTTTaGCTCTTGGAGCTTCAAAAA +
Preference number: 4 (lower is better)
Translates to: FRSLTRRTNRRLCAQNHQLLYAV*LLELQK
Trigger: TTTTTGAAGCTCCAAGAGGCAAACGGCATATAATAA...CTGGTGGTTCTGAGCACATAGACGCCTATTAGTCCTTCTGGTCAGTGAACGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp CTTCCACATGGTTATTTCAATGCAAGATCCGATCAGCATGAAGAGTCTAGTACAAGTTATATCGCTATGTaGTGGCCAGATTCCCTCACA +
Preference number: 4 (lower is better)
Translates to: LPHGYFNARSDQHEESSTSYIAM*WPDSLT
Trigger: TGTGAGGGAATCTGGCCAGCACATAGCGATATAACT...TGTACTAGACTCTTCATGCTGATCGGATCTTGCATTGAAATAACCATGTGGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp TGTCCAAGTCATATTCCGTCATACAACCAACTCCAAGGAACTCTAACTCACTTTATACTTCTTGAATCTTaGGTGCTGTCCCTTGACAGG +
Preference number: 4 (lower is better)
Translates to: CPSHIPSYNQLQGTLTHFILLES*VLSLDR
Trigger: CCTGTCAAGGGACAGCACGCAAGATTCAAGAAGTAT...AAAGTGAGTTAGAGTTCCTTGGAGTTGGTTGTATGACGGAATATGACTTGGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp AGCCCACACAACTGGAAACTTTCAAAGGCACTTAATGGATATAAAACTCTGCAACTTTGCAGTAGCCAATaGGGTTCAGATTTGTGCCCT +
Preference number: 4 (lower is better)
Translates to: SPHNWKLSKALNGYKTLQLCSSQ*GSDLCP
Trigger: AGGGCACAAATCTGAACCGCATTGGCTACTGCAAAG...TTGCAGAGTTTTATATCCATTAAGTGCCTTTGAAAGTTTCCAGTTGTGTGGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp ACTTGTCATCATAAGAGAAACGGATGTTCGTCACGTGAGCCGAGTGACCGAAGTACACACGGACACTATTaGTCTTTAAATATGGTTGTA +
Preference number: 4 (lower is better)
Translates to: TCHHKRNGCSSREPSDRSTHGHY*SLNMVV
Trigger: TACAACCATATTTAAAGAGCAATAGTGTCCGTGTGT...ACTTCGGTCACTCGGCTCACGTGACGAACATCCGTTTCTCTTATGATGACAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR GCA 90 bp AGAGGCTTCTGGCATTTTACAGACATCGCCACACAAATACACTGCAGTCGTCTCTGTTTACAGCTGTATTaGTTCAAAACTGAAGATGAG +
Preference number: 4 (lower is better)
Translates to: RGFWHFTDIATQIHCSRLCLQLY*FKTEDE
Trigger: CTCATCTTCAGTTTTGAAGCAATACAGCTGTAAACA...GAGACGACTGCAGTGTATTTGTGTGGCGATGTCTGTAAAATGCCAGAAGCCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR CCA 90 bp AATTTTCGTTCACTGACCAGAAGGACTAATAGGCGTCTATGTGCTCAGAACCACGCAACTCCATGTGTATaGACATCTTTAAGAAGAGAC +
Preference number: 4 (lower is better)
Translates to: NFRSLTRRTNRRLCAQNHATPCV*TSLRRD
Trigger: GTCTCTTCTTAAAGATGTCCATACACATGGAGTTGC...GTGGTTCTGAGCACATAGACGCCTATTAGTCCTTCTGGTCAGTGAACGAAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp AAAGTTTTGATGCAAATTAAAAGCTACATATTGGTTAGGGTAACCGAGGCTTCAAATATCTCACTGTCCTaGGTCCCTGCTAGAAGGCGG +
Preference number: 4 (lower is better)
Translates to: KVLMQIKSYILVRVTEASNISLS*VPARRR
Trigger: CCGCCTTCTAGCAGGGACCCAGGACAGTGAGATATT...TGAAGCCTCGGTTACCCTAACCAATATGTAGCTTTTAATTTGCATCAAAACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp AATTTTCGTTCACTGACCAGAAGGACTAATAGGCGTCTATGTGCTCAGAACCACGTGACATGTGCAGAATaGCCCACATACTTTCTAAAT +
Preference number: 4 (lower is better)
Translates to: NFRSLTRRTNRRLCAQNHVTCAE*PTYFLN
Trigger: ATTTAGAAAGTATGTGGGCCATTCTGCACATGTCAC...GTGGTTCTGAGCACATAGACGCCTATTAGTCCTTCTGGTCAGTGAACGAAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp AGCCCACACAACTGGAAACTTTCAAAGGCACTTAATGGATATAAAACTCTGCAATATATCGCTATGTGCTaGCCAGATTCCCTCACAGGT +
Preference number: 4 (lower is better)
Translates to: SPHNWKLSKALNGYKTLQYIAMC*PDSLTG
Trigger: ACCTGTGAGGGAATCTGGCCAGCACATAGCGATATA...TTGCAGAGTTTTATATCCATTAAGTGCCTTTGAAAGTTTCCAGTTGTGTGGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp GCAGCCCACACAACTGGAAACTTTCAAAGGCACTTAATGGATATAAAACTCTGCCAAAATCATCTCCGGTaGCTAAAAGGGAACAGTCTT +
Preference number: 4 (lower is better)
Translates to: AAHTTGNFQRHLMDIKLCQNHLR*LKGNSL
Trigger: AAGACTGTTCCCTTTTAGCCACCGGAGATGATTTTG...GCAGAGTTTTATATCCATTAAGTGCCTTTGAAAGTTTCCAGTTGTGTGGGCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp AGCATATGTTTACAGCTGTATTGCTTCAAAACTGAAGATGAGAGGAGCAAGGGGCAAAATCATCTCCGGTaGCTAAAAGGGAACAGTCTT +
Preference number: 4 (lower is better)
Translates to: SICLQLYCFKTEDERSKGQNHLR*LKGNSL
Trigger: AAGACTGTTCCCTTTTAGCCACCGGAGATGATTTTG...CCCCTTGCTCCTCTCATCTTCAGTTTTGAAGCAATACAGCTGTAAACATATGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR CCA 90 bp GATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACAGAAAACCAGCATAAATCTTGGTaGTGTAGTCAATGGCCTTTT +
Preference number: 4 (lower is better)
Translates to: DRQTWLSLCITSHMVTENQHKSW*CSQWPF
Trigger: AAAAGGCCATTGACTACACCACCAAGATTTATGCTG...GTTTTCTGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp AGCCCACACAACTGGAAACTTTCAAAGGCACTTAATGGATATAAAACTCTGCAACGTCCCATATGTGGATaGAAGGTGTTGTCCCTATCT +
Preference number: 4 (lower is better)
Translates to: SPHNWKLSKALNGYKTLQRPICG*KVLSLS
Trigger: AGATAGGGACAACACCTTCCATCCACATATGGGACG...TTGCAGAGTTTTATATCCATTAAGTGCCTTTGAAAGTTTCCAGTTGTGTGGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp TACAAGATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACAGCTGATTCTGATATCTTaGATAGCAGATTTCCGGTCT +
Preference number: 4 (lower is better)
Translates to: YKIGRHGYHSASPVTWLQLILIS*IADFRS
Trigger: AGACCGGAAATCTGCTATCCAAGATATCAGAATCAG...CTGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATCTTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp TGTCCAAGTCATATTCCGTCATACAACCAACTCCAAGGAACTCTAACTCACTTTGGAGAGTCCAGATTATaGGAGCAGTTGTGTAACTTC +
Preference number: 4 (lower is better)
Translates to: CPSHIPSYNQLQGTLTHFGESRL*EQLCNF
Trigger: GAAGTTACACAACTGCTCCCATAATCTGGACTCTCC...AAAGTGAGTTAGAGTTCCTTGGAGTTGGTTGTATGACGGAATATGACTTGGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp TGTCCAAGTCATATTCCGTCATACAACCAACTCCAAGGAACTCTAACTCACTTTACATCCTGTAGTCACTaGTCAGCTACATGGAAAGTG +
Preference number: 4 (lower is better)
Translates to: CPSHIPSYNQLQGTLTHFTSCSH*SATWKV
Trigger: CACTTTCCATGTAGCTGACCAGTGACTACAGGATGT...AAAGTGAGTTAGAGTTCCTTGGAGTTGGTTGTATGACGGAATATGACTTGGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp CCAACTCCAAGGAACTCTAACTCACTTTATAATTTTGATTTACCAGCTATTCCTGTCCATGTCCCAAAGTaGTGGCACGAATTGAAGGGT +
Preference number: 4 (lower is better)
Translates to: PTPRNSNSLYNFDLPAIPVHVPK*WHELKG
Trigger: ACCCTTCAATTCGTGCCATCACTTTGGGACATGGAC...AGGAATAGCTGGTAAATCAAAATTATAAAGTGAGTTAGAGTTCCTTGGAGTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp GTAACCGAGGCTTCAAAATTCGTCAGCGGGCTACATTATCAGATAGGATTTCTTTCCCTTGACAGGATATaGAAAAAGCTTAACGAAACC +
Preference number: 4 (lower is better)
Translates to: VTEASKFVSGLHYQIGFLSLDRI*KKLNET
Trigger: GGTTTCGTTAAGCTTTTTTCATATCCTGTCAAGGGA...AAGAAATCCTATCTGATAATGTAGCCCGCTGACGAATTTTGAAGCCTCGGTTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp GCAGCCCACACAACTGGAAACTTTCAAAGGCACTTAATGGATATAAAACTCTGCAGAACTTCATATGTTTaGCCCCGACAGATACAAACT +
Preference number: 4 (lower is better)
Translates to: AAHTTGNFQRHLMDIKLCRTSYV*PRQIQT
Trigger: AGTTTGTATCTGTCGGGGTCAAACATATGAAGTTCT...GCAGAGTTTTATATCCATTAAGTGCCTTTGAAAGTTTCCAGTTGTGTGGGCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp CCAACTCCAAGGAACTCTAACTCACTTTATAATTTTGATTTACCAGCTATTCCTGCACCTGTTGACACCTaGATGTATTTGCCATCCGCA +
Preference number: 4 (lower is better)
Translates to: PTPRNSNSLYNFDLPAIPAPVDT*MYLPSA
Trigger: TGCGGATGGCAAATACATTCAGGTGTCAACAGGTGC...AGGAATAGCTGGTAAATCAAAATTATAAAGTGAGTTAGAGTTCCTTGGAGTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp GTAACCGAGGCTTCAAAATTCGTCAGCGGGCTACATTATCAGATAGGATTTCTTTTTGTGGGTTTGGCATaGAACACAATGAAAACCCAT +
Preference number: 4 (lower is better)
Translates to: VTEASKFVSGLHYQIGFLFVGLA*NTMKTH
Trigger: ATGGGTTTTCATTGTGTTTCATGCCAAACCCACAAA...AAGAAATCCTATCTGATAATGTAGCCCGCTGACGAATTTTGAAGCCTCGGTTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp AGCATATGTTTACAGCTGTATTGCTTCAAAACTGAAGATGAGAGGAGCAAGGGGACCTTTTCTCTAAACTaGCAAATGCAAGTAGCCAGT +
Preference number: 4 (lower is better)
Translates to: SICLQLYCFKTEDERSKGTFSLN*QMQVAS
Trigger: ACTGGCTACTTGCATTTGTCAGTTTAGAGAAAAGGT...CCCCTTGCTCCTCTCATCTTCAGTTTTGAAGCAATACAGCTGTAAACATATGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR GCA 90 bp AGCCCACACAACTGGAAACTTTCAAAGGCACTTAATGGATATAAAACTCTGCAACGGCGGGATTTATTCTaGGATAGCCTTGATTTGACA +
Preference number: 4 (lower is better)
Translates to: SPHNWKLSKALNGYKTLQRRDLF*DSLDLT
Trigger: TGTCAAATCAAGGCTATCGCAGAATAAATCCCGCCG...TTGCAGAGTTTTATATCCATTAAGTGCCTTTGAAAGTTTCCAGTTGTGTGGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356458.7
ENST00000673912.1
CDS-3UTR GCA 90 bp GCAGCCCACACAACTGGAAACTTTCAAAGGCACTTAATGGATATAAAACTCTGCTTTACATCAGGAATCTaGATATCCCAACAGCGATCA +
Preference number: 4 (lower is better)
Translates to: AAHTTGNFQRHLMDIKLCFTSGI*ISQQRS
Trigger: TGATCGCTGTTGGGATATGCAGATTCCTGATGTAAA...GCAGAGTTTTATATCCATTAAGTGCCTTTGAAAGTTTCCAGTTGTGTGGGCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356458.7
ENST00000673912.1
CDS-3UTR GCA 90 bp CTTCCACATGGTTATTTCAATGCAAGATCCGATCAGCATGAAGAGTCTAGTACATTTGAGGAAGGGCACTaGGTGGTTTTTCTCTTTACT +
Preference number: 4 (lower is better)
Translates to: LPHGYFNARSDQHEESSTFEEGH*VVFLFT
Trigger: AGTAAAGAGAAAAACCACGCAGTGCCCTTCCTCAAA...TGTACTAGACTCTTCATGCTGATCGGATCTTGCATTGAAATAACCATGTGGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp AGCAGCCCACACAACTGGAAACTTTCAAAGGCACTTAATGGATATAAAACTCTGAAAGCCCTTATCCAGTaGATACATAGCAAACACAGG +
Preference number: 4 (lower is better)
Translates to: SSPHNWKLSKALNGYKTLKALIQ*IHSKHR
Trigger: CCTGTGTTTGCTATGTATGCACTGGATAAGGGCTTT...CAGAGTTTTATATCCATTAAGTGCCTTTGAAAGTTTCCAGTTGTGTGGGCTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp TACAAGATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACAGGCACCTGAATTCACTTaGAATAATTTTCCTCTAGAG +
Preference number: 4 (lower is better)
Translates to: YKIGRHGYHSASPVTWLQAPEFT*NNFPLE
Trigger: CTCTAGAGGAAAATTATTGCAAGTGAATTCAGGTGC...CTGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATCTTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp CCAACTCCAAGGAACTCTAACTCACTTTATAATTTTGATTTACCAGCTATTCCTAGCACAGAGTCATTGTaGAGCCACCTCACGTTAGTG +
Preference number: 4 (lower is better)
Translates to: PTPRNSNSLYNFDLPAIPSTESL*SHLTLV
Trigger: CACTAACGTGAGGTGGCTGCACAATGACTCTGTGCT...AGGAATAGCTGGTAAATCAAAATTATAAAGTGAGTTAGAGTTCCTTGGAGTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp GCAGCCCACACAACTGGAAACTTTCAAAGGCACTTAATGGATATAAAACTCTGCACACCTGAATGTATTTaGCATCCGCAGAAAAATCCA +
Preference number: 4 (lower is better)
Translates to: AAHTTGNFQRHLMDIKLCTPECI*HPQKNP
Trigger: TGGATTTTTCTGCGGATGGCAAATACATTCAGGTGT...GCAGAGTTTTATATCCATTAAGTGCCTTTGAAAGTTTCCAGTTGTGTGGGCTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp GTACAAGATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACATTTGTCAACATGGTGTaGGTTACACTTTACCACAAA +
Preference number: 4 (lower is better)
Translates to: VQDRQTWLSLCITSHMVTFVNMV*VTLYHK
Trigger: TTTGTGGTAAAGTGTAACCCACACCATGTTGACAAA...TGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATCTTGTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp AGCAGCCCACACAACTGGAAACTTTCAAAGGCACTTAATGGATATAAAACTCTGCAAAATCATCTCCGGTaGCTAAAAGGGAACAGTCTT +
Preference number: 4 (lower is better)
Translates to: SSPHNWKLSKALNGYKTLQNHLR*LKGNSL
Trigger: AAGACTGTTCCCTTTTAGCCACCGGAGATGATTTTG...CAGAGTTTTATATCCATTAAGTGCCTTTGAAAGTTTCCAGTTGTGTGGGCTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp TGTCCAAGTCATATTCCGTCATACAACCAACTCCAAGGAACTCTAACTCACTTTAACATAAGAGGCTTCTaGCATTTTACAGACATCGCC +
Preference number: 4 (lower is better)
Translates to: CPSHIPSYNQLQGTLTHFNIRGF*HFTDIA
Trigger: GGCGATGTCTGTAAAATGCCAGAAGCCTCTTATGTT...AAAGTGAGTTAGAGTTCCTTGGAGTTGGTTGTATGACGGAATATGACTTGGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp CTTCCACATGGTTATTTCAATGCAAGATCCGATCAGCATGAAGAGTCTAGTACATTTTGGTTATTGGTTTaGAATCAGTGTCCCACAGTC +
Preference number: 4 (lower is better)
Translates to: LPHGYFNARSDQHEESSTFWLLV*NQCPTV
Trigger: GACTGTGGGACACTGATTTCAAACCAATAACCAAAA...TGTACTAGACTCTTCATGCTGATCGGATCTTGCATTGAAATAACCATGTGGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp GTAACCGAGGCTTCAAAATTCGTCAGCGGGCTACATTATCAGATAGGATTTCTTATCATTTCTTTTCTGTaGTGGAAAGAGACCATGTCT +
Preference number: 4 (lower is better)
Translates to: VTEASKFVSGLHYQIGFLIISFL*WKETMS
Trigger: AGACATGGTCTCTTTCCATCACAGAAAAGAAATGAT...AAGAAATCCTATCTGATAATGTAGCCCGCTGACGAATTTTGAAGCCTCGGTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp CTTCCACATGGTTATTTCAATGCAAGATCCGATCAGCATGAAGAGTCTAGTACAAGAACTTCATATGTTTaGCCCCGACAGATACAAACT +
Preference number: 4 (lower is better)
Translates to: LPHGYFNARSDQHEESSTRTSYV*PRQIQT
Trigger: AGTTTGTATCTGTCGGGGTCAAACATATGAAGTTCT...TGTACTAGACTCTTCATGCTGATCGGATCTTGCATTGAAATAACCATGTGGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp TGTCCAAGTCATATTCCGTCATACAACCAACTCCAAGGAACTCTAACTCACTTTAGAACTTCATATGTTTaGCCCCGACAGATACAAACT +
Preference number: 4 (lower is better)
Translates to: CPSHIPSYNQLQGTLTHFRTSYV*PRQIQT
Trigger: AGTTTGTATCTGTCGGGGTCAAACATATGAAGTTCT...AAAGTGAGTTAGAGTTCCTTGGAGTTGGTTGTATGACGGAATATGACTTGGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp CCAACTCCAAGGAACTCTAACTCACTTTATAATTTTGATTTACCAGCTATTCCTGATTTGTGCCCTGAGTaGGGTCATAGAAGTCAACTG +
Preference number: 4 (lower is better)
Translates to: PTPRNSNSLYNFDLPAIPDLCPE*GHRSQL
Trigger: CAGTTGACTTCTATGACCTCACTCAGGGCACAAATC...AGGAATAGCTGGTAAATCAAAATTATAAAGTGAGTTAGAGTTCCTTGGAGTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp CCAACTCCAAGGAACTCTAACTCACTTTATAATTTTGATTTACCAGCTATTCCTAACACAGGACAAGGGTaGCACACTGAATCTGCTAAG +
Preference number: 4 (lower is better)
Translates to: PTPRNSNSLYNFDLPAIPNTGQG*HTESAK
Trigger: CTTAGCAGATTCAGTGTGTCACCCTTGTCCTGTGTT...AGGAATAGCTGGTAAATCAAAATTATAAAGTGAGTTAGAGTTCCTTGGAGTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp TGTCCAAGTCATATTCCGTCATACAACCAACTCCAAGGAACTCTAACTCACTTTACCTTTTCTCTAAACTaGCAAATGCAAGTAGCCAGT +
Preference number: 4 (lower is better)
Translates to: CPSHIPSYNQLQGTLTHFTFSLN*QMQVAS
Trigger: ACTGGCTACTTGCATTTGTCAGTTTAGAGAAAAGGT...AAAGTGAGTTAGAGTTCCTTGGAGTTGGTTGTATGACGGAATATGACTTGGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp AGCAATCTCAATGTTTCTTTCTCATTTCGCAAGCATATGTTTACAGCTGTATTGGAACGTTTAAGTGTATaGCAAAAGCAAGCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: SNLNVSFSFRKHMFTAVLERLSV*QKQARG
Trigger: GCCCCTGGCTTGCTTTTGTCATACACTTAAACGTTC...CAATACAGCTGTAAACATATGCTTGCGAAATGAGAAAGAAACATTGAGATTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR GCA 90 bp TGTCCAAGTCATATTCCGTCATACAACCAACTCCAAGGAACTCTAACTCACTTTTTTACATCAGGAATCTaGATATCCCAACAGCGATCA +
Preference number: 4 (lower is better)
Translates to: CPSHIPSYNQLQGTLTHFFTSGI*ISQQRS
Trigger: TGATCGCTGTTGGGATATGCAGATTCCTGATGTAAA...AAAGTGAGTTAGAGTTCCTTGGAGTTGGTTGTATGACGGAATATGACTTGGACA
40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000356458.7
ENST00000673912.1
CDS-3UTR GCA 90 bp AAAGTTTTGATGCAAATTAAAAGCTACATATTGGTTAGGGTAACCGAGGCTTCAAGTGAAGCCCCCACCTaGTTGTTGCCAGAATTTGAT +
Preference number: 4 (lower is better)
Translates to: KVLMQIKSYILVRVTEASSEAPT*LLPEFD
Trigger: ATCAAATTCTGGCAACAAGCAGGTGGGGGCTTCACT...TGAAGCCTCGGTTACCCTAACCAATATGTAGCTTTTAATTTGCATCAAAACTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp GTACAAGATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACATTATTATATGCCGTTTaGCTCTTGGAGCTTCAAAAA +
Preference number: 4 (lower is better)
Translates to: VQDRQTWLSLCITSHMVTLLYAV*LLELQK
Trigger: TTTTTGAAGCTCCAAGAGGCAAACGGCATATAATAA...TGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATCTTGTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp AGCCCACACAACTGGAAACTTTCAAAGGCACTTAATGGATATAAAACTCTGCAAGAAGGTCTTATTATATaGCGTTTGCCTCTTGGAGCT +
Preference number: 4 (lower is better)
Translates to: SPHNWKLSKALNGYKTLQEGLII*RLPLGA
Trigger: AGCTCCAAGAGGCAAACGGCATATAATAAGACCTTC...TTGCAGAGTTTTATATCCATTAAGTGCCTTTGAAAGTTTCCAGTTGTGTGGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp GATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACAGAAAACACACACGGACACTATTaGTCTTTAAATATGGTTGTA +
Preference number: 4 (lower is better)
Translates to: DRQTWLSLCITSHMVTENTHGHY*SLNMVV
Trigger: TACAACCATATTTAAAGAGCAATAGTGTCCGTGTGT...GTTTTCTGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp CCAACTCCAAGGAACTCTAACTCACTTTATAATTTTGATTTACCAGCTATTCCTCCATATGCATATATATaGCTCCTTCCCGACTTGGCC +
Preference number: 4 (lower is better)
Translates to: PTPRNSNSLYNFDLPAIPPYAYI*LLPDLA
Trigger: GGCCAAGTCGGGAAGGAGCCATATATATGCATATGG...AGGAATAGCTGGTAAATCAAAATTATAAAGTGAGTTAGAGTTCCTTGGAGTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp AAAGTTTTGATGCAAATTAAAAGCTACATATTGGTTAGGGTAACCGAGGCTTCAAGCATAGACATCTACTaGGCCATCATTGGATCCCAC +
Preference number: 4 (lower is better)
Translates to: KVLMQIKSYILVRVTEASSIDIY*AIIGSH
Trigger: GTGGGATCCAATGATGGCCCAGTAGATGTCTATGCT...TGAAGCCTCGGTTACCCTAACCAATATGTAGCTTTTAATTTGCATCAAAACTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp AGCCCACACAACTGGAAACTTTCAAAGGCACTTAATGGATATAAAACTCTGCAAACCAGTTTGTCAACATaGTGTGGGTTACACTTTACC +
Preference number: 4 (lower is better)
Translates to: SPHNWKLSKALNGYKTLQTSLST*CGLHFT
Trigger: GGTAAAGTGTAACCCACACCATGTTGACAAACTGGT...TTGCAGAGTTTTATATCCATTAAGTGCCTTTGAAAGTTTCCAGTTGTGTGGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp TGTCCAAGTCATATTCCGTCATACAACCAACTCCAAGGAACTCTAACTCACTTTAACAAGCAGTGTCATTaGGCCACTCTTATCAATTTC +
Preference number: 4 (lower is better)
Translates to: CPSHIPSYNQLQGTLTHFNKQCH*ATLINF
Trigger: GAAATTGATAAGAGTGGCCCAATGACACTGCTTGTT...AAAGTGAGTTAGAGTTCCTTGGAGTTGGTTGTATGACGGAATATGACTTGGACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp AGCCCACACAACTGGAAACTTTCAAAGGCACTTAATGGATATAAAACTCTGCAATCACAGCATAAATCTTaGTGGTGTAGTCAATGGCCT +
Preference number: 4 (lower is better)
Translates to: SPHNWKLSKALNGYKTLQSQHKS*WCSQWP
Trigger: AGGCCATTGACTACACCACCAAGATTTATGCTGTGA...TTGCAGAGTTTTATATCCATTAAGTGCCTTTGAAAGTTTCCAGTTGTGTGGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp GTACAAGATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACACTATTTTGGATTTTGTaGGTTTGGCATGAAACACAA +
Preference number: 4 (lower is better)
Translates to: VQDRQTWLSLCITSHMVTLFWIL*VWHETQ
Trigger: TTGTGTTTCATGCCAAACCCACAAAATCCAAAATAG...TGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATCTTGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp AGCATATGTTTACAGCTGTATTGCTTCAAAACTGAAGATGAGAGGAGCAAGGGGTTACCAGCTATTCCTTaGGTTTACAATTTGTTCTGC +
Preference number: 4 (lower is better)
Translates to: SICLQLYCFKTEDERSKGLPAIP*VYNLFC
Trigger: GCAGAACAAATTGTAAACCCAAGGAATAGCTGGTAA...CCCCTTGCTCCTCTCATCTTCAGTTTTGAAGCAATACAGCTGTAAACATATGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR TCA 90 bp CCAACTCCAAGGAACTCTAACTCACTTTATAATTTTGATTTACCAGCTATTCCTACCACTCTGTTTGGCTaGTATGGATCCCAGGAAATA +
Preference number: 4 (lower is better)
Translates to: PTPRNSNSLYNFDLPAIPTTLFG*YGSQEI
Trigger: TATTTCCTGGGATCCATATCAGCCAAACAGAGTGGT...AGGAATAGCTGGTAAATCAAAATTATAAAGTGAGTTAGAGTTCCTTGGAGTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp AGCCCACACAACTGGAAACTTTCAAAGGCACTTAATGGATATAAAACTCTGCAATCCCTTGACAGGATATaGAAAAAGCTTAACGAAACC +
Preference number: 4 (lower is better)
Translates to: SPHNWKLSKALNGYKTLQSLDRI*KKLNET
Trigger: GGTTTCGTTAAGCTTTTTTCATATCCTGTCAAGGGA...TTGCAGAGTTTTATATCCATTAAGTGCCTTTGAAAGTTTCCAGTTGTGTGGGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp CTTCCACATGGTTATTTCAATGCAAGATCCGATCAGCATGAAGAGTCTAGTACAATCCATTTAGAATGCTaGAGCACTTCTGTGGTAAAT +
Preference number: 4 (lower is better)
Translates to: LPHGYFNARSDQHEESSTIHLEC*STSVVN
Trigger: ATTTACCACAGAAGTGCTTCAGCATTCTAAATGGAT...TGTACTAGACTCTTCATGCTGATCGGATCTTGCATTGAAATAACCATGTGGAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp AAAGTTTTGATGCAAATTAAAAGCTACATATTGGTTAGGGTAACCGAGGCTTCATCCTCCAGTCCCAAATaGAGACTGTGTTTTTGGCAT +
Preference number: 4 (lower is better)
Translates to: KVLMQIKSYILVRVTEASSSSPK*RLCFWH
Trigger: ATGCCAAAAACACAGTCTGCATTTGGGACTGGAGGA...TGAAGCCTCGGTTACCCTAACCAATATGTAGCTTTTAATTTGCATCAAAACTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp AAAGTTTTGATGCAAATTAAAAGCTACATATTGGTTAGGGTAACCGAGGCTTCAATACACGACAGCAACTaGAGCAATGTGGTAGACTAC +
Preference number: 4 (lower is better)
Translates to: KVLMQIKSYILVRVTEASIHDSN*SNVVDY
Trigger: GTAGTCTACCACATTGCTGCAGTTGCTGTCGTGTAT...TGAAGCCTCGGTTACCCTAACCAATATGTAGCTTTTAATTTGCATCAAAACTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp AAAGTTTTGATGCAAATTAAAAGCTACATATTGGTTAGGGTAACCGAGGCTTCACTTCAATTCCTTTGCTaGTCACCTTCCCATAAGCAG +
Preference number: 4 (lower is better)
Translates to: KVLMQIKSYILVRVTEASLQFLC*SPSHKQ
Trigger: CTGCTTATGGGAAGGTGAGCAGCAAAGGAATTGAAG...TGAAGCCTCGGTTACCCTAACCAATATGTAGCTTTTAATTTGCATCAAAACTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp CCAACTCCAAGGAACTCTAACTCACTTTATAATTTTGATTTACCAGCTATTCCTATGCAAGGCAAAGGATaGTCTGAAGATCCCCTGTTT +
Preference number: 4 (lower is better)
Translates to: PTPRNSNSLYNFDLPAIPMQGKG*SEDPLF
Trigger: AAACAGGGGATCTTCAGACCATCCTTTGCCTTGCAT...AGGAATAGCTGGTAAATCAAAATTATAAAGTGAGTTAGAGTTCCTTGGAGTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp AAAGTTTTGATGCAAATTAAAAGCTACATATTGGTTAGGGTAACCGAGGCTTCAGTTGCTGACACCTTCTaGAATAAACCTCCACTGGAA +
Preference number: 4 (lower is better)
Translates to: KVLMQIKSYILVRVTEASVADTF*NKPPLE
Trigger: TTCCAGTGGAGGTTTATTCCAGAAGGTGTCAGCAAC...TGAAGCCTCGGTTACCCTAACCAATATGTAGCTTTTAATTTGCATCAAAACTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp CTTCCACATGGTTATTTCAATGCAAGATCCGATCAGCATGAAGAGTCTAGTACATATGTCCTCTTGTTGTaGCTATCTTTTCTCCCTTTT +
Preference number: 4 (lower is better)
Translates to: LPHGYFNARSDQHEESSTYVLLL*LSFLPF
Trigger: AAAAGGGAGAAAAGATAGCCACAACAAGAGGACATA...TGTACTAGACTCTTCATGCTGATCGGATCTTGCATTGAAATAACCATGTGGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp AGCAGCCCACACAACTGGAAACTTTCAAAGGCACTTAATGGATATAAAACTCTGTTACCAGCTATTCCTTaGGTTTACAATTTGTTCTGC +
Preference number: 4 (lower is better)
Translates to: SSPHNWKLSKALNGYKTLLPAIP*VYNLFC
Trigger: GCAGAACAAATTGTAAACCCAAGGAATAGCTGGTAA...CAGAGTTTTATATCCATTAAGTGCCTTTGAAAGTTTCCAGTTGTGTGGGCTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp CCAACTCCAAGGAACTCTAACTCACTTTATAATTTTGATTTACCAGCTATTCCTACATCCTGTAGTCACTaGTCAGCTACATGGAAAGTG +
Preference number: 4 (lower is better)
Translates to: PTPRNSNSLYNFDLPAIPTSCSH*SATWKV
Trigger: CACTTTCCATGTAGCTGACCAGTGACTACAGGATGT...AGGAATAGCTGGTAAATCAAAATTATAAAGTGAGTTAGAGTTCCTTGGAGTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp AGCCCACACAACTGGAAACTTTCAAAGGCACTTAATGGATATAAAACTCTGCAAATCCATTTAGAATGCTaGAGCACTTCTGTGGTAAAT +
Preference number: 4 (lower is better)
Translates to: SPHNWKLSKALNGYKTLQIHLEC*STSVVN
Trigger: ATTTACCACAGAAGTGCTTCAGCATTCTAAATGGAT...TTGCAGAGTTTTATATCCATTAAGTGCCTTTGAAAGTTTCCAGTTGTGTGGGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp AAAGTTTTGATGCAAATTAAAAGCTACATATTGGTTAGGGTAACCGAGGCTTCAAAAGTTATCATGGGATaGCACGGCAAGGTATTTTCC +
Preference number: 4 (lower is better)
Translates to: KVLMQIKSYILVRVTEASKVIMG*HGKVFS
Trigger: GGAAAATACCTTGCCGTGGCATCCCATGATAACTTT...TGAAGCCTCGGTTACCCTAACCAATATGTAGCTTTTAATTTGCATCAAAACTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp AGCCCACACAACTGGAAACTTTCAAAGGCACTTAATGGATATAAAACTCTGCAAGCACCTGAATTCACTTaGAATAATTTTCCTCTAGAG +
Preference number: 4 (lower is better)
Translates to: SPHNWKLSKALNGYKTLQAPEFT*NNFPLE
Trigger: CTCTAGAGGAAAATTATTGCAAGTGAATTCAGGTGC...TTGCAGAGTTTTATATCCATTAAGTGCCTTTGAAAGTTTCCAGTTGTGTGGGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp TGTCCAAGTCATATTCCGTCATACAACCAACTCCAAGGAACTCTAACTCACTTTTTATTATATGCCGTTTaGCTCTTGGAGCTTCAAAAA +
Preference number: 4 (lower is better)
Translates to: CPSHIPSYNQLQGTLTHFLLYAV*LLELQK
Trigger: TTTTTGAAGCTCCAAGAGGCAAACGGCATATAATAA...AAAGTGAGTTAGAGTTCCTTGGAGTTGGTTGTATGACGGAATATGACTTGGACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR GCA 90 bp TGTCCAAGTCATATTCCGTCATACAACCAACTCCAAGGAACTCTAACTCACTTTACACACGGACACTATTaGTCTTTAAATATGGTTGTA +
Preference number: 4 (lower is better)
Translates to: CPSHIPSYNQLQGTLTHFTHGHY*SLNMVV
Trigger: TACAACCATATTTAAAGAGCAATAGTGTCCGTGTGT...AAAGTGAGTTAGAGTTCCTTGGAGTTGGTTGTATGACGGAATATGACTTGGACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp AGCCCACACAACTGGAAACTTTCAAAGGCACTTAATGGATATAAAACTCTGCAATATGTCCTCTTGTTGTaGCTATCTTTTCTCCCTTTT +
Preference number: 4 (lower is better)
Translates to: SPHNWKLSKALNGYKTLQYVLLL*LSFLPF
Trigger: AAAAGGGAGAAAAGATAGCCACAACAAGAGGACATA...TTGCAGAGTTTTATATCCATTAAGTGCCTTTGAAAGTTTCCAGTTGTGTGGGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp CCAACTCCAAGGAACTCTAACTCACTTTATAATTTTGATTTACCAGCTATTCCTGCAACTCCATGTGTATaGACATCTTTAAGAAGAGAC +
Preference number: 4 (lower is better)
Translates to: PTPRNSNSLYNFDLPAIPATPCV*TSLRRD
Trigger: GTCTCTTCTTAAAGATGTCCATACACATGGAGTTGC...AGGAATAGCTGGTAAATCAAAATTATAAAGTGAGTTAGAGTTCCTTGGAGTTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp CCAACTCCAAGGAACTCTAACTCACTTTATAATTTTGATTTACCAGCTATTCCTCAGCATAAATCTTGGTaGTGTAGTCAATGGCCTTTT +
Preference number: 4 (lower is better)
Translates to: PTPRNSNSLYNFDLPAIPQHKSW*CSQWPF
Trigger: AAAAGGCCATTGACTACACCACCAAGATTTATGCTG...AGGAATAGCTGGTAAATCAAAATTATAAAGTGAGTTAGAGTTCCTTGGAGTTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp CCAACTCCAAGGAACTCTAACTCACTTTATAATTTTGATTTACCAGCTATTCCTCTTCTTTTCGATCTTTaGTGTGAACTACTTCTGTCA +
Preference number: 4 (lower is better)
Translates to: PTPRNSNSLYNFDLPAIPLLFDL*CELLLS
Trigger: TGACAGAAGTAGTTCACATCAAAGATCGAAAAGAAG...AGGAATAGCTGGTAAATCAAAATTATAAAGTGAGTTAGAGTTCCTTGGAGTTGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR TCA 90 bp CCAACTCCAAGGAACTCTAACTCACTTTATAATTTTGATTTACCAGCTATTCCTCAAATAAGTTTTTCATaGCACACGGACACTATTGCT +
Preference number: 4 (lower is better)
Translates to: PTPRNSNSLYNFDLPAIPQISFS*HTDTIA
Trigger: AGCAATAGTGTCCGTGTGTCATGAAAAACTTATTTG...AGGAATAGCTGGTAAATCAAAATTATAAAGTGAGTTAGAGTTCCTTGGAGTTGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CCA 90 bp AAAGTTTTGATGCAAATTAAAAGCTACATATTGGTTAGGGTAACCGAGGCTTCACTATTTTGGATTTTGTaGGTTTGGCATGAAACACAA +
Preference number: 4 (lower is better)
Translates to: KVLMQIKSYILVRVTEASLFWIL*VWHETQ
Trigger: TTGTGTTTCATGCCAAACCCACAAAATCCAAAATAG...TGAAGCCTCGGTTACCCTAACCAATATGTAGCTTTTAATTTGCATCAAAACTTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS TCA 90 bp GGGCTGCGGCGGACCTGCAGGGGCTCAGCGCGCGGCGCAGGGCGCTaGTTTCCGCGGCGACACACAGGCACAGCCCAGCGGGCCGGCCGC +
Preference number: 5 (lower is better)
Translates to: GLRRTCRGSARGAGR*FPRRHTGTAQRAGR
Trigger: GCGGCCGGCCCGCTGGGCTGTGCCTGTGTGTCGCCGCGGAAATCAGCGCCCTGCGCCGCGCGCTGAGCCCCTGCAGGTCCGCCGCAGCCC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356458.7
ENST00000673912.1
CDS GCA 90 bp GACACACAGGCACAGCCCAGCGGGCCGGCCGCCACCATCATCCGCTaGAGCCGCCGCAGACAAGCCGCCGCCGCCGGTGTGCGGCCGCCA +
Preference number: 5 (lower is better)
Translates to: DTQAQPSGPAATIIR*SRRRQAAAAGVRPP
Trigger: TGGCGGCCGCACACCGGCGGCGGCGGCTTGTCTGCGGCGGCTGCAGCGGATGATGGTGGCGGCCGGCCCGCTGGGCTGTGCCTGTGTGTC
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356458.7
ENST00000673912.1
CDS GCA 90 bp GGGCTCCGGGGGCGGGGCCACAACGCCGCGCTAGTGAACCTCAGCTaGCGGTTACTAGGCGAGATCTCGCCGCTTGGAAACAGCGACGCC +
Preference number: 5 (lower is better)
Translates to: GLRGRGHNAALVNLS*RLLGEISPLGNSDA
Trigger: GGCGTCGCTGTTTCCAAGCGGCGAGATCTCGCCTAGTAACCGGCAGCTGAGGTTCACTAGCGCGGCGTTGTGGCCCCGCCCCCGGAGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000356458.7
ENST00000673912.1
CDS GCA 90 bp GTTTGCGGTGCGCCGGGGCTTCGCGGCAGGCGGCGGGATTTATTCTaGGATAGCCTTGATTTGACAGGCAACCCGGGTGAGCTCTGCCAT +
Preference number: 5 (lower is better)
Translates to: VCGAPGLRGRRRDLF*DSLDLTGNPGELCH
Trigger: ATGGCAGAGCTCACCCGGGTTGCCTGTCAAATCAAGGCTATCGCAGAATAAATCCCGCCGCCTGCCGCGAAGCCCCGGCGCACCGCAAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000491655.1
ENST00000673912.1
CDS TCA 90 bp AAGAGCCGTCCTTCATGCCCAGGGCCAGCTGAGATCCGTCGGGGCTaGAAGCTACACTGCGAACCGCCTCTTCCATGTTACAGCGGGCGA +
Preference number: 5 (lower is better)
Translates to: KSRPSCPGPAEIRRG*KLHCEPPLPCYSGR
Trigger: TCGCCCGCTGTAACATGGAAGAGGCGGTTCGCAGTGTAGCTTTCAGCCCCGACGGATCTCAGCTGGCCCTGGGCATGAAGGACGGCTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS GCA 90 bp AGGGCTGTGTCGGCGCCGCCCACCGTGAGCAGCACAGAGTCATTGTaGAGCCACCTCACGTTAGTGACATGTGCACTGTGCCCCACATAC +
Preference number: 5 (lower is better)
Translates to: RAVSAPPTVSSTESL*SHLTLVTCALCPTY
Trigger: GTATGTGGGGCACAGTGCACATGTCACTAACGTGAGGTGGCTGCACAATGACTCTGTGCTGCTCACGGTGGGCGGCGCCGACACAGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS TCA 90 bp GGCTTCGCGGCAGGCGGCGGGATTTATTCTGCGATAGCCTTGATTTaGCAGGCAACCCGGGTGAGCTCTGCCATCGCCGTCTTTGGATCC +
Preference number: 5 (lower is better)
Translates to: GFAAGGGIYSAIALI*QATRVSSAIAVFGS
Trigger: GGATCCAAAGACGGCGATGGCAGAGCTCACCCGGGTTGCCTGTCAAATCAAGGCTATCGCAGAATAAATCCCGCCGCCTGCCGCGAAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000491655.1
ENST00000673912.1
CDS TCA 90 bp ATCAGGAATCTGCATATCCCAACAGCGATCACCCAGTTCGCTCACTaGAGTTTGCGGTGCGCCGGGGCTTCGCGGCAGGCGGCGGGATTT +
Preference number: 5 (lower is better)
Translates to: IRNLHIPTAITQFAH*SLRCAGASRQAAGF
Trigger: AAATCCCGCCGCCTGCCGCGAAGCCCCGGCGCACCGCAAACTTCAGTGAGCGAACTGGGTGATCGCTGTTGGGATATGCAGATTCCTGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356458.7
ENST00000673912.1
CDS GCA 90 bp ATCTGCATATCCCAACAGCGATCACCCAGTTCGCTCACTGAAGTTTaGGGTGCGCCGGGGCTTCGCGGCAGGCGGCGGGATTTATTCTGC +
Preference number: 5 (lower is better)
Translates to: ICISQQRSPSSLTEV*GAPGLRGRRRDLFC
Trigger: GCAGAATAAATCCCGCCGCCTGCCGCGAAGCCCCGGCGCACCGCAAACTTCAGTGAGCGAACTGGGTGATCGCTGTTGGGATATGCAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356458.7
ENST00000673912.1
CDS GCA 90 bp CATCCTCTTCCACGTCGGTGTCTGACTCCTCGCTGTCCACCAGCTTaGTCTCCTGGGTCCCCACAAACTCCCTGGTCCAGATCATCAGGG +
Preference number: 5 (lower is better)
Translates to: HPLPRRCLTPRCPPA*SPGSPQTPWSRSSG
Trigger: CCCTGATGATCTGGACCAGGGAGTTTGTGGGGACCCAGGAGAGCAAGCTGGTGGACAGCGAGGAGTCAGACACCGACGTGGAAGAGGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp AATGAAGTCACCTCAACTCCACTCAGGGTGGTACACCAAGGTGCAGCCTTGGGTGCGAGATCTCGCCGCTaGGAAACAGCGACGCCCCGG +
Preference number: 5 (lower is better)
Translates to: NEVTSTPLRVVHQGAALGARSRR*ETATPR
Trigger: CCGGGGCGTCGCTGTTTCCAAGCGGCGAGATCTCGC...ACCCAAGGCTGCACCTTGGTGTACCACCCTGAGTGGAGTTGAGGTGACTTCATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356458.7
ENST00000673912.1
CDS CCA 90 bp TCACCCCCTTGGAGTGGAAGCACCGCAGCATGGAGAGGGTGTGTTTaGTCATGGCGTCCCATATGTGGATGGAAGGTGTTGTCCCTGGGG +
Preference number: 5 (lower is better)
Translates to: SPPWSGSTAAWRGCV*SWRPICGWKVLSLG
Trigger: CCCCAGGGACAACACCTTCCATCCACATATGGGACGCCATGACCAAACACACCCTCTCCATGCTGCGGTGCTTCCACTCCAAGGGGGTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673905.1
CDS-3UTR CAA 90 bp ATATGCGCTCCAGGTGACCCCCTCGGCTGGCAACCTTGGCACCTTCCTGCCATCATCAGCTCCACCTTCTaGGGGTGCAGTTTCCAGCAT +
Preference number: 5 (lower is better)
Translates to: ICAPGDPLGWQPWHLPAIISSTF*GCSFQH
Trigger: ATGCTGGAAACTGCACCCCAAGAAGGTGGAGCTGAT...GATGGCAGGAAGGTGCCAAGGTTGCCAGCCGAGGGGGTCACCTGGAGCGCATAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR CAA 90 bp CGAATGCGCCCGGGGACTCTGCTTAGAGTGTGCTGGGGAGAAACTTGCTGTCAGGGAGCCTTTTCTCGTTaGAGGAAGGGCACTGCGTGG +
Preference number: 5 (lower is better)
Translates to: RMRPGTLLRVCWGETCCQGAFSR*RKGTAW
Trigger: CCACGCAGTGCCCTTCCTCAAACGAGAAAAGGCTCC...CTGACAGCAAGTTTCTCCCCAGCACACTCTAAGCAGAGTCCCCGGGCGCATTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR CAA 90 bp AGTGGCCAGGCCCCAGATCTCCCCTTCCATGTGACCATCAATCAGGATGTTAGACCTCGGCTGGCAACCTaGGCACCTTCCTGCCATCGC +
Preference number: 5 (lower is better)
Translates to: SGQAPDLPFHVTINQDVRPRLAT*APSCHR
Trigger: GCGATGGCAGGAAGGTGCCAAGGTTGCCAGCCGAGG...TCTAACATCCTGATTGATGGTCACATGGAAGGGGAGATCTGGGGCCTGGCCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS TCA 90 bp AGCAACATCGCTGTCATAGCCTCCATCCTCTTCCACGTCGGTGTCTaGCTCCTCGCTGTCCACCAGCTTGCTCTCCTGGGTCCCCACAAA +
Preference number: 5 (lower is better)
Translates to: SNIAVIASILFHVGV*LLAVHQLALLGPHK
Trigger: TTTGTGGGGACCCAGGAGAGCAAGCTGGTGGACAGCGAGGAGTCAGACACCGACGTGGAAGAGGATGGAGGCTATGACAGCGATGTTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS TCA 90 bp TTGGTGACAGCCAGGCAGAGACAGAGGAACACATACGGGCGCCCATaGCAGGCCACCCACCCGTGTATGAACTGGAGTTTCAAGCTGTCC +
Preference number: 5 (lower is better)
Translates to: LVTARQRQRNTYGRP*QATHPCMNWSFKLS
Trigger: GGACAGCTTGAAACTCCAGTTCATACACGGGTGGGTGGCCTGTCATGGGCGCCCGTATGTGTTCCTCTGTCTCTGCCTGGCTGTCACCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493997.1
CDS CCA 90 bp CCTTGGAGTGGAAGCACCGCAGCATGGAGAGGGTGTGTTTGGTCATaGCGTCCCATATGTGGATGGAAGGTGTTGTCCCTGGGGTTTCCG +
Preference number: 5 (lower is better)
Translates to: PWSGSTAAWRGCVWS*RPICGWKVLSLGFP
Trigger: CGGAAACCCCAGGGACAACACCTTCCATCCACATATGGGACGCCATGACCAAACACACCCTCTCCATGCTGCGGTGCTTCCACTCCAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673905.1
CDS-3UTR CAA 90 bp CTGCAGCGTTTTGAGCTTGTGCATCCGGGGCAGCATGGTAGGCATTTCCCAACGAGCTGCTGGTGTGGCTaGGTGCCTTCCATTTCCCTG +
Preference number: 5 (lower is better)
Translates to: LQRFELVHPGQHGRHFPTSCWCG*VPSISL
Trigger: CAGGGAAATGGAAGGCACCAAGCCACACCAGCAGCT...CGTTGGGAAATGCCTACCATGCTGCCCCGGATGCACAAGCTCAAAACGCTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp CTGCAGCGTTTTGAGCTTGTGCATCCGGGGCAGCATGGTAGGCATTTCCCAACGTGCAGCGTTTTGAGCTaGTGCATCCGGGGCAGCATG +
Preference number: 5 (lower is better)
Translates to: LQRFELVHPGQHGRHFPTCSVLS*CIRGSM
Trigger: CATGCTGCCCCGGATGCACAAGCTCAAAACGCTGCA...CGTTGGGAAATGCCTACCATGCTGCCCCGGATGCACAAGCTCAAAACGCTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp ATATGCGCTCCAGGTGACCCCCTCGGCTGGCAACCTTGGCACCTTCCTGCCATCCACCAAGGTGCAGCCTaGGGTTACCCTCATTTATCT +
Preference number: 5 (lower is better)
Translates to: ICAPGDPLGWQPWHLPAIHQGAA*GYPHLS
Trigger: AGATAAATGAGGGTAACCCAAGGCTGCACCTTGGTG...GATGGCAGGAAGGTGCCAAGGTTGCCAGCCGAGGGGGTCACCTGGAGCGCATAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR CAA 90 bp ATATGCGCTCCAGGTGACCCCCTCGGCTGGCAACCTTGGCACCTTCCTGCCATCACCAAACACCTGTGTTaGTCTCCAGAGCGGTGTGAA +
Preference number: 5 (lower is better)
Translates to: ICAPGDPLGWQPWHLPAITKHLC*SPERCE
Trigger: TTCACACCGCTCTGGAGACAAACACAGGTGTTTGGT...GATGGCAGGAAGGTGCCAAGGTTGCCAGCCGAGGGGGTCACCTGGAGCGCATAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS CCA 90 bp GGCTTGTCTCGCTCTCGCACAATCACTTCAAATATCTCACTGTCCTaGGTCCCTGCTAGAAGGCGGTCTGCTTTCCAGCACACGCTCCGG +
Preference number: 5 (lower is better)
Translates to: GLSRSRTITSNISLS*VPARRRSAFQHTLR
Trigger: CCGGAGCGTGTGCTGGAAAGCAGACCGCCTTCTAGCAGGGACCCAGGACAGTGAGATATTTGAAGTGATTGTGCGAGAGCGAGACAAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp CTGCAGCGTTTTGAGCTTGTGCATCCGGGGCAGCATGGTAGGCATTTCCCAACGTGCGATAGCCTTGATTaGACAGGCAACCCGGGTGAG +
Preference number: 5 (lower is better)
Translates to: LQRFELVHPGQHGRHFPTCDSLD*TGNPGE
Trigger: CTCACCCGGGTTGCCTGTCAAATCAAGGCTATCGCA...CGTTGGGAAATGCCTACCATGCTGCCCCGGATGCACAAGCTCAAAACGCTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356458.7
ENST00000673912.1
CDS-3UTR CAA 90 bp GAGGCACCTCAGCATGGCCTCTGCAGTTGCTGGCTGGTAGCAGCAGCAGCAATATCCCGACTTGGCCAGTaGCAACGAGAGTTTTGTCTG +
Preference number: 5 (lower is better)
Translates to: EAPQHGLCSCWLVAAAAISRLGQ*QREFCL
Trigger: CAGACAAAACTCTCGTTGCAACTGGCCAAGTCGGGA...TATTGCTGCTGCTGCTACCAGCCAGCAACTGCAGAGGCCATGCTGAGGTGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp CTTGTCAGCCAGGTCCCAGATCCGGGCTGTGCCATCGTTGCTGGCAGAGATGAAAGGATCAACATCGGCTaGTCTCGCTCTCGCACAATC +
Preference number: 5 (lower is better)
Translates to: LVSQVPDPGCAIVAGRDERINIG*SRSRTI
Trigger: GATTGTGCGAGAGCGAGACAAGCCGATGTTGATCCT...TTCATCTCTGCCAGCAACGATGGCACAGCCCGGATCTGGGACCTGGCTGACAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR CAA 90 bp GAGGCACCTCAGCATGGCCTCTGCAGTTGCTGGCTGGTAGCAGCAGCAGCAATAAGCAGCACAGAGTCATaGTGCAGCCACCTCACGTTA +
Preference number: 5 (lower is better)
Translates to: EAPQHGLCSCWLVAAAAISSTES*CSHLTL
Trigger: TAACGTGAGGTGGCTGCACAATGACTCTGTGCTGCT...TATTGCTGCTGCTGCTACCAGCCAGCAACTGCAGAGGCCATGCTGAGGTGCCTC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp GAGGCACCTCAGCATGGCCTCTGCAGTTGCTGGCTGGTAGCAGCAGCAGCAATACGTGGCATCACGGTTTaGGAGAGTCCAGATTATGGG +
Preference number: 5 (lower is better)
Translates to: EAPQHGLCSCWLVAAAAIRGITV*ESPDYG
Trigger: CCCATAATCTGGACTCTCCAAAACCGTGATGCCACG...TATTGCTGCTGCTGCTACCAGCCAGCAACTGCAGAGGCCATGCTGAGGTGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS TCA 90 bp TCCTTTCACATCCCCTTTTTGCCCTTGTCCACCCTGCTCTGTGCCTaGAGCTGGTCTGCATGGAGAGCATCAATGGGCTCCCTTGTCCTC +
Preference number: 5 (lower is better)
Translates to: SFHIPFLPLSTLLCA*SWSAWRASMGSLVL
Trigger: GAGGACAAGGGAGCCCATTGATGCTCTCCATGCAGACCAGCTTCAGGCACAGAGCAGGGTGGACAAGGGCAAAAAGGGGATGTGAAAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673916.1
CDS CCA 90 bp ATGGTCAGGCTGAGAATGTCGTCATCGTGCCCCAGGTACAGCCTCTaGGAGTGCTGCTGCCGATTATACACGACAGCAACTGCAGCAATG +
Preference number: 5 (lower is better)
Translates to: MVRLRMSSSCPRYSL*ECCCRLYTTATAAM
Trigger: CATTGCTGCAGTTGCTGTCGTGTATAATCGGCAGCAGCACTCCCAGAGGCTGTACCTGGGGCACGATGACGACATTCTCAGCCTGACCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356458.7
ENST00000493997.1
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp GACCCTTCGCGGTTGTGGATTCTGCGTGAACACTTAGTACTGGATGTTCACCAATCGCTGTCCACCAGCTaGCTCTCCTGGGTCCCCACA +
Preference number: 5 (lower is better)
Translates to: DPSRLWILREHLVLDVHQSLSTS*LSWVPT
Trigger: TGTGGGGACCCAGGAGAGCAAGCTGGTGGACAGCGA...TTGGTGAACATCCAGTACTAAGTGTTCACGCAGAATCCACAACCGCGAAGGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR CAA 90 bp TCTCCGTCTTTGGTTCCCACTAAGATTTTTCCTTTTCCACGGCACACGGAGCGCCGGGCTGTGCCATCGTaGCTGGCAGAGATGAAGAGG +
Preference number: 5 (lower is better)
Translates to: SPSLVPTKIFPFPRHTERRAVPS*LAEMKR
Trigger: CCTCTTCATCTCTGCCAGCAACGATGGCACAGCCCG...GCGCTCCGTGTGCCGTGGAAAAGGAAAAATCTTAGTGGGAACCAAAGACGGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS CCA 90 bp AGCAGCATCTCTTCCAACCTGCCCAGTAGCCACATAGTCCTTCACTaGATGGATGGTCAGGCTGAGAATGTCGTCATCGTGCCCCAGGTA +
Preference number: 5 (lower is better)
Translates to: SSISSNLPSSHIVLH*MDGQAENVVIVPQV
Trigger: TACCTGGGGCACGATGACGACATTCTCAGCCTGACCATCCATCCAGTGAAGGACTATGTGGCTACTGGGCAGGTTGGAAGAGATGCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356458.7
ENST00000493997.1
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp AATTTTCGTTCACTGACCAGAAGGACTAATAGGCGTCTATGTGCTCAGAACCACGCGAGATCTCGCCGCTaGGAAACAGCGACGCCCCGG +
Preference number: 5 (lower is better)
Translates to: NFRSLTRRTNRRLCAQNHARSRR*ETATPR
Trigger: CCGGGGCGTCGCTGTTTCCAAGCGGCGAGATCTCGC...GTGGTTCTGAGCACATAGACGCCTATTAGTCCTTCTGGTCAGTGAACGAAAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356458.7
ENST00000673912.1
CDS-3UTR CAA 90 bp CTGCAGCGTTTTGAGCTTGTGCATCCGGGGCAGCATGGTAGGCATTTCCCAACGGTTGCAACGAGAGTTTaGTCTGGGTGTAAGGCAAGG +
Preference number: 5 (lower is better)
Translates to: LQRFELVHPGQHGRHFPTVATRV*SGCKAR
Trigger: CCTTGCCTTACACCCAGACAAAACTCTCGTTGCAAC...CGTTGGGAAATGCCTACCATGCTGCCCCGGATGCACAAGCTCAAAACGCTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp ATCACGGTTTTGGAGAGTCCAGATTATGGGAGCAGTTGTGTAACTTCTGCAGCGTCGCTGTCCACCAGCTaGCTCTCCTGGGTCCCCACA +
Preference number: 5 (lower is better)
Translates to: ITVLESPDYGSSCVTSAASLSTS*LSWVPT
Trigger: TGTGGGGACCCAGGAGAGCAAGCTGGTGGACAGCGA...CGCTGCAGAAGTTACACAACTGCTCCCATAATCTGGACTCTCCAAAACCGTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp GAGGCACCTCAGCATGGCCTCTGCAGTTGCTGGCTGGTAGCAGCAGCAGCAATATTGTTTAACAGCTTCTaGTCAGCCAGGTCCCAGATC +
Preference number: 5 (lower is better)
Translates to: EAPQHGLCSCWLVAAAAILFNSF*SARSQI
Trigger: GATCTGGGACCTGGCTGACAAGAAGCTGTTAAACAA...TATTGCTGCTGCTGCTACCAGCCAGCAACTGCAGAGGCCATGCTGAGGTGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp ATCACGGTTTTGGAGAGTCCAGATTATGGGAGCAGTTGTGTAACTTCTGCAGCGGCATGGCCTCTGCAGTaGCTGGCTGGTAGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: ITVLESPDYGSSCVTSAAAWPLQ*LAGSSS
Trigger: GCTGCTGCTACCAGCCAGCAACTGCAGAGGCCATGC...CGCTGCAGAAGTTACACAACTGCTCCCATAATCTGGACTCTCCAAAACCGTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp AAAAGGAAGCTTTGTCAATGCTTCCCGCACACTCTCCGTGACTTTACGAATGCGGCATGGCCTCTGCAGTaGCTGGCTGGTAGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: KRKLCQCFPHTLRDFTNAAWPLQ*LAGSSS
Trigger: GCTGCTGCTACCAGCCAGCAACTGCAGAGGCCATGC...CGCATTCGTAAAGTCACGGAGAGTGTGCGGGAAGCATTGACAAAGCTTCCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR CAA 90 bp GGAAACTCCCATCGTTCAAGCCAACCGCTAAGGCTTTCCCATCAGGGGAAAAGGAGGTGGAAGGATCACTaGAGCTTTGGAGGTGGAGGG +
Preference number: 5 (lower is better)
Translates to: GNSHRSSQPLRLSHQGKRRWKDH*SFGGGG
Trigger: CCCTCCACCTCCAAAGCTCAAGTGATCCTTCCACCT...CCTTTTCCCCTGATGGGAAAGCCTTAGCGGTTGGCTTGAACGATGGGAGTTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000673655.1
ENST00000674035.1
CDS-3UTR CAA 90 bp CCACCAGGAAACTCCCATCGTTCAAGCCAACCGCTAAGGCTTTCCCATCAGGGGGAGACCCTGTCTTTTTaGAGTTTCCGTACTGCCAGC +
Preference number: 5 (lower is better)
Translates to: PPGNSHRSSQPLRLSHQGETLSF*SFRTAS
Trigger: GCTGGCAGTACGGAAACTCAAAAAAGACAGGGTCTC...CCCCTGATGGGAAAGCCTTAGCGGTTGGCTTGAACGATGGGAGTTTCCTGGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000673655.1
CDS-3UTR CAA 90 bp AAACTCCCATCGTTCAAGCCAACCGCTAAGGCTTTCCCATCAGGGGAAAAGGCAATCCCCTTTTTGCCCTaGTCCACCCTGCTCTGTGCC +
Preference number: 5 (lower is better)
Translates to: KLPSFKPTAKAFPSGEKAIPFLP*STLLCA
Trigger: GGCACAGAGCAGGGTGGACAAGGGCAAAAAGGGGAT...TGCCTTTTCCCCTGATGGGAAAGCCTTAGCGGTTGGCTTGAACGATGGGAGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000673916.1
CDS GCA 90 bp GTCTTTGGTAAGACTGGCAGCATTTACGTCAGTTATATCGCTATGTaGTGGCCAGATTCCCTCACAGGTGGGCCCCAGGACACAGGTCCA +
Preference number: 5 (lower is better)
Translates to: VFGKTGSIYVSYIAM*WPDSLTGGPQDTGP
Trigger: TGGACCTGTGTCCTGGGGCCCACCTGTGAGGGAATCTGGCCAGCACATAGCGATATAACTGACGTAAATGCTGCCAGTCTTACCAAAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS CCA 90 bp TTACGTCAGTTATATCGCTATGTGCTGGCCAGATTCCCTCACAGGTaGGCCCCAGGACACAGGTCCATGTGTCCCACTCTATCTTCTCGA +
Preference number: 5 (lower is better)
Translates to: LRQLYRYVLARFPHR*APGHRSMCPTLSSR
Trigger: TCGAGAAGATAGAGTGGGACACATGGACCTGTGTCCTGGGGCCCACCTGTGAGGGAATCTGGCCAGCACATAGCGATATAACTGACGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS CCA 90 bp TGGATGGAAGGTGTTGTCCCTGGGGTTTCCGTAATATCACCTATCTaGCTGGTGGCCACCACGTTTCTGTACTTGGGGTGCTGGTTCACT +
Preference number: 5 (lower is better)
Translates to: WMEGVVPGVSVISPI*LVATTFLYLGCWFT
Trigger: AGTGAACCAGCACCCCAAGTACAGAAACGTGGTGGCCACCAGCCAGATAGGTGATATTACGGAAACCCCAGGGACAACACCTTCCATCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673905.1
CDS CCA 90 bp CACCGCAGCATGGAGAGGGTGTGTTTGGTCATGGCGTCCCATATGTaGATGGAAGGTGTTGTCCCTGGGGTTTCCGTAATATCACCTATC +
Preference number: 5 (lower is better)
Translates to: HRSMERVCLVMASHM*MEGVVPGVSVISPI
Trigger: GATAGGTGATATTACGGAAACCCCAGGGACAACACCTTCCATCCACATATGGGACGCCATGACCAAACACACCCTCTCCATGCTGCGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673905.1
CDS-3UTR CAA 90 bp AATGAAGTCACCTCAACTCCACTCAGGGTGGTACACCAAGGTGCAGCCTTGGGTAGGATCAACATCGGCTaGTCTCGCTCTCGCACAATC +
Preference number: 5 (lower is better)
Translates to: NEVTSTPLRVVHQGAALGRINIG*SRSRTI
Trigger: GATTGTGCGAGAGCGAGACAAGCCGATGTTGATCCT...ACCCAAGGCTGCACCTTGGTGTACCACCCTGAGTGGAGTTGAGGTGACTTCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp AATGAAGTCACCTCAACTCCACTCAGGGTGGTACACCAAGGTGCAGCCTTGGGTGAAGCCCCCACCTGCTaGTTGCCAGAATTTGATGTG +
Preference number: 5 (lower is better)
Translates to: NEVTSTPLRVVHQGAALGEAPTC*LPEFDV
Trigger: CACATCAAATTCTGGCAACAAGCAGGTGGGGGCTTC...ACCCAAGGCTGCACCTTGGTGTACCACCCTGAGTGGAGTTGAGGTGACTTCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp AATGAAGTCACCTCAACTCCACTCAGGGTGGTACACCAAGGTGCAGCCTTGGGTATGGAGAGGGTGTGTTaGGTCATGGCGTCCCATATG +
Preference number: 5 (lower is better)
Translates to: NEVTSTPLRVVHQGAALGMERVC*VMASHM
Trigger: CATATGGGACGCCATGACCAAACACACCCTCTCCAT...ACCCAAGGCTGCACCTTGGTGTACCACCCTGAGTGGAGTTGAGGTGACTTCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp AATTTTCGTTCACTGACCAGAAGGACTAATAGGCGTCTATGTGCTCAGAACCACCCTCGGCTGGCAACCTaGGCACCTTCCTGCCATCGC +
Preference number: 5 (lower is better)
Translates to: NFRSLTRRTNRRLCAQNHPRLAT*APSCHR
Trigger: GCGATGGCAGGAAGGTGCCAAGGTTGCCAGCCGAGG...GTGGTTCTGAGCACATAGACGCCTATTAGTCCTTCTGGTCAGTGAACGAAAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp GTACAAGATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACACCTCGGCTGGCAACCTaGGCACCTTCCTGCCATCGC +
Preference number: 5 (lower is better)
Translates to: VQDRQTWLSLCITSHMVTPRLAT*APSCHR
Trigger: GCGATGGCAGGAAGGTGCCAAGGTTGCCAGCCGAGG...TGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATCTTGTAC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp AATGAAGTCACCTCAACTCCACTCAGGGTGGTACACCAAGGTGCAGCCTTGGGTGTCACACATGCGCAGTaGACATCAGCCTTGTCTGCA +
Preference number: 5 (lower is better)
Translates to: NEVTSTPLRVVHQGAALGVTHAQ*TSALSA
Trigger: TGCAGACAAGGCTGATGTCAACTGCGCATGTGTGAC...ACCCAAGGCTGCACCTTGGTGTACCACCCTGAGTGGAGTTGAGGTGACTTCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp CCATCGTTCAAGCCAACCGCTAAGGCTTTCCCATCAGGGGAAAAGGCACAGCATGAGGGAGACCCTTTTTaGAGTTTCCGTACTGCCAGC +
Preference number: 5 (lower is better)
Translates to: PSFKPTAKAFPSGEKAQHEGDPF*SFRTAS
Trigger: GCTGGCAGTACGGAAACTCAAAAAAGGGTCTCCCTC...ATGCTGTGCCTTTTCCCCTGATGGGAAAGCCTTAGCGGTTGGCTTGAACGATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000674035.1
CDS-3UTR CAA 90 bp CCATCGTTCAAGCCAACCGCTAAGGCTTTCCCATCAGGGGAAAAGGCACAGCATACGGGGAGCACTTTTTaGAGTTTCCGTACTGCCAGC +
Preference number: 5 (lower is better)
Translates to: PSFKPTAKAFPSGEKAQHTGSTF*SFRTAS
Trigger: GCTGGCAGTACGGAAACTCAAAAAAGTGCTCCCCGT...ATGCTGTGCCTTTTCCCCTGATGGGAAAGCCTTAGCGGTTGGCTTGAACGATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000673916.1
CDS-3UTR CAA 90 bp CAGTGTCAGCATTTACCACCAGGAAACTCCCATCGTTCAAGCCAACCGCTAAGGTCCTCTGGTTTCAGGTaGACTTTGGCCAACGGGGAG +
Preference number: 5 (lower is better)
Translates to: QCQHLPPGNSHRSSQPLRSSGFR*TLANGE
Trigger: CTCCCCGTTGGCCAAAGTCAACCTGAAACCAGAGGA...CCTTAGCGGTTGGCTTGAACGATGGGAGTTTCCTGGTGGTAAATGCTGACACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673916.1
CDS GCA 90 bp GAGCAGCACAGAGTCATTGTGCAGCCACCTCACGTTAGTGACATGTaGACTGTGCCCCACATACTTCTTGAATCTTGCGTGCTGTCCCTT +
Preference number: 5 (lower is better)
Translates to: EQHRVIVQPPHVSDM*TVPHILLESCVLSL
Trigger: AAGGGACAGCACGCAAGATTCAAGAAGTATGTGGGGCACAGTGCACATGTCACTAACGTGAGGTGGCTGCACAATGACTCTGTGCTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS GCA 90 bp ATATCACCTATCTGGCTGGTGGCCACCACGTTTCTGTACTTGGGGTaGTGGTTCACTGTGAGACAGAGGATGTCATCTGTGTGCTCCAGA +
Preference number: 5 (lower is better)
Translates to: ISPIWLVATTFLYLG*WFTVRQRMSSVCSR
Trigger: TCTGGAGCACACAGATGACATCCTCTGTCTCACAGTGAACCAGCACCCCAAGTACAGAAACGTGGTGGCCACCAGCCAGATAGGTGATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673905.1
CDS CCA 90 bp TTTGGTAAGACTGGCAGCATTTACGTCAGTTATATCGCTATGTGCTaGCCAGATTCCCTCACAGGTGGGCCCCAGGACACAGGTCCATGT +
Preference number: 5 (lower is better)
Translates to: FGKTGSIYVSYIAMC*PDSLTGGPQDTGPC
Trigger: ACATGGACCTGTGTCCTGGGGCCCACCTGTGAGGGAATCTGGCCAGCACATAGCGATATAACTGACGTAAATGCTGCCAGTCTTACCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS CCA 90 bp ACAGCTGACGATGCCACCACAGCTACCAACCATGCTCCTCCTCTGTaGAGAAATCTCACTTCCTGGGCGATGAGTGGTACAGAACAATCA +
Preference number: 5 (lower is better)
Translates to: TADDATTATNHAPPL*RNLTSWAMSGTEQS
Trigger: TGATTGTTCTGTACCACTCATCGCCCAGGAAGTGAGATTTCTCCACAGAGGAGGAGCATGGTTGGTAGCTGTGGTGGCATCGTCAGCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493997.1
CDS-3UTR CAA 90 bp CACATACTTGTCATCATAAGAGAAACGGATGTTCGTCACGTGAGCCGAGTGACCTGGCTCCTTCCCGACTaGGCCAGTTGCAACGAGAGT +
Preference number: 5 (lower is better)
Translates to: HILVIIRETDVRHVSRVTWLLPD*ASCNES
Trigger: ACTCTCGTTGCAACTGGCCAAGTCGGGAAGGAGCCA...GGTCACTCGGCTCACGTGACGAACATCCGTTTCTCTTATGATGACAAGTATGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR CAA 90 bp CTGCAGCGTTTTGAGCTTGTGCATCCGGGGCAGCATGGTAGGCATTTCCCAACGGTAACCTCAGTGTATTaGGGCCAAATTCCACTCACT +
Preference number: 5 (lower is better)
Translates to: LQRFELVHPGQHGRHFPTVTSVY*GQIPLT
Trigger: AGTGAGTGGAATTTGGCCCAAATACACTGAGGTTAC...CGTTGGGAAATGCCTACCATGCTGCCCCGGATGCACAAGCTCAAAACGCTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp GAGGCACCTCAGCATGGCCTCTGCAGTTGCTGGCTGGTAGCAGCAGCAGCAATAAAAAGGGAACAGTCTTaGGTAAGACTGGCAGCATTT +
Preference number: 5 (lower is better)
Translates to: EAPQHGLCSCWLVAAAAIKREQS*VRLAAF
Trigger: AAATGCTGCCAGTCTTACCAAAGACTGTTCCCTTTT...TATTGCTGCTGCTGCTACCAGCCAGCAACTGCAGAGGCCATGCTGAGGTGCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp CGAATGCGCCCGGGGACTCTGCTTAGAGTGTGCTGGGGAGAAACTTGCTGTCAGAAAAGGGAACAGTCTTaGGTAAGACTGGCAGCATTT +
Preference number: 5 (lower is better)
Translates to: RMRPGTLLRVCWGETCCQKREQS*VRLAAF
Trigger: AAATGCTGCCAGTCTTACCAAAGACTGTTCCCTTTT...CTGACAGCAAGTTTCTCCCCAGCACACTCTAAGCAGAGTCCCCGGGCGCATTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR CAA 90 bp TTTCGTTCACTGACCAGAAGGACTAATAGGCGTCTATGTGCTCAGAACCACCAGAGCTGCTGGTGTGGCTaGGTGCCTTCCATTTCCCTG +
Preference number: 5 (lower is better)
Translates to: FRSLTRRTNRRLCAQNHQSCWCG*VPSISL
Trigger: CAGGGAAATGGAAGGCACCAAGCCACACCAGCAGCT...CTGGTGGTTCTGAGCACATAGACGCCTATTAGTCCTTCTGGTCAGTGAACGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp TACAAGATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACAGGCATGGCCTCTGCAGTaGCTGGCTGGTAGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: YKIGRHGYHSASPVTWLQAWPLQ*LAGSSS
Trigger: GCTGCTGCTACCAGCCAGCAACTGCAGAGGCCATGC...CTGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATCTTGTA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp ACAGTGTCAGCATTTACCACCAGGAAACTCCCATCGTTCAAGCCAACCGCTAAGAGGTGGAAGGATCACTaGAGCTTTGGAGGTGGAGGG +
Preference number: 5 (lower is better)
Translates to: TVSAFTTRKLPSFKPTAKRWKDH*SFGGGG
Trigger: CCCTCCACCTCCAAAGCTCAAGTGATCCTTCCACCT...CTTAGCGGTTGGCTTGAACGATGGGAGTTTCCTGGTGGTAAATGCTGACACTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673655.1
ENST00000674035.1
CDS-3UTR CAA 90 bp ATCTCCCAGGACGCTTGTCCAGGAGGCCCAGGTGATCTTCTCAATGACCACGGCCTCATAAGGCATTATTaGAGGATAAACACAGGGCTC +
Preference number: 5 (lower is better)
Translates to: ISQDACPGGPGDLLNDHGLIRHY*RINTGL
Trigger: GAGCCCTGTGTTTATCCTCAAATAATGCCTTATGAG...GCCGTGGTCATTGAGAAGATCACCTGGGCCTCCTGGACAAGCGTCCTGGGAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS TCA 90 bp CATGCCGTTGCTGACACCTTCTGGAATAAACCTCCACTGGAAAACTaGGTGATCAGCCCCTCCTGTGCTCAACACCCACTGAAAGTCATG +
Preference number: 5 (lower is better)
Translates to: HAVADTFWNKPPLEN*VISPSCAQHPLKVM
Trigger: CATGACTTTCAGTGGGTGTTGAGCACAGGAGGGGCTGATCACTCAGTTTTCCAGTGGAGGTTTATTCCAGAAGGTGTCAGCAACGGCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000356458.7
ENST00000493997.1
ENST00000673695.1
ENST00000673912.1
CDS GCA 90 bp GTACAGCCTCTGGGAGTGCTGCTGCCGATTATACACGACAGCAACTaGAGCAATGTGGTAGACTACTTCTCCAGCTTGTGTGTAGAACAG +
Preference number: 5 (lower is better)
Translates to: VQPLGVLLPIIHDSN*SNVVDYFSSLCVEQ
Trigger: CTGTTCTACACACAAGCTGGAGAAGTAGTCTACCACATTGCTGCAGTTGCTGTCGTGTATAATCGGCAGCAGCACTCCCAGAGGCTGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356458.7
ENST00000493997.1
ENST00000673695.1
ENST00000673912.1
CDS GCA 90 bp ACAGAGTCATTGTGCAGCCACCTCACGTTAGTGACATGTGCACTGTaGCCCACATACTTCTTGAATCTTGCGTGCTGTCCCTTGACAGGA +
Preference number: 5 (lower is better)
Translates to: TESLCSHLTLVTCAL*PTYFLNLACCPLTG
Trigger: TCCTGTCAAGGGACAGCACGCAAGATTCAAGAAGTATGTGGGGCACAGTGCACATGTCACTAACGTGAGGTGGCTGCACAATGACTCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS CCA 90 bp AGCAGTCATCAGAAAAGCTTCCCTTTTTCTCCGAAGATGGTCAGTTaGAGTCCTCATGCCTCCATCTGCTGCTCCTCCAGGTCTCTAGCA +
Preference number: 5 (lower is better)
Translates to: SSHQKSFPFSPKMVS*SPHASICCSSRSLA
Trigger: TGCTAGAGACCTGGAGGAGCAGCAGATGGAGGCATGAGGACTCCAACTGACCATCTTCGGAGAAAAAGGGAAGCTTTTCTGATGACTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493997.1
CDS CCA 90 bp ACAGCTACCAACCATGCTCCTCCTCTGTGGAGAAATCTCACTTCCTaGGCGATGAGTGGTACAGAACAATCACCCTTGCCAAAACAGCAC +
Preference number: 5 (lower is better)
Translates to: TATNHAPPLWRNLTS*AMSGTEQSPLPKQH
Trigger: GTGCTGTTTTGGCAAGGGTGATTGTTCTGTACCACTCATCGCCCAGGAAGTGAGATTTCTCCACAGAGGAGGAGCATGGTTGGTAGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493997.1
CDS-3UTR CAA 90 bp TTTCGTTCACTGACCAGAAGGACTAATAGGCGTCTATGTGCTCAGAACCACCAGTGCGATAGCCTTGATTaGACAGGCAACCCGGGTGAG +
Preference number: 5 (lower is better)
Translates to: FRSLTRRTNRRLCAQNHQCDSLD*TGNPGE
Trigger: CTCACCCGGGTTGCCTGTCAAATCAAGGCTATCGCA...CTGGTGGTTCTGAGCACATAGACGCCTATTAGTCCTTCTGGTCAGTGAACGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356458.7
ENST00000673912.1
CDS-3UTR CAA 90 bp CTGCAGCGTTTTGAGCTTGTGCATCCGGGGCAGCATGGTAGGCATTTCCCAACGCTGATAATGTCGTCGTaGTGTCCCAGGAAGAATTTT +
Preference number: 5 (lower is better)
Translates to: LQRFELVHPGQHGRHFPTLIMSS*CPRKNF
Trigger: AAAATTCTTCCTGGGACACAACGACGACATTATCAG...CGTTGGGAAATGCCTACCATGCTGCCCCGGATGCACAAGCTCAAAACGCTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp ACGGTTTTGGAGAGTCCAGATTATGGGAGCAGTTGTGTAACTTCTGCAGCGTTTTGGCTCCTTCCCGACTaGGCCAGTTGCAACGAGAGT +
Preference number: 5 (lower is better)
Translates to: TVLESPDYGSSCVTSAAFWLLPD*ASCNES
Trigger: ACTCTCGTTGCAACTGGCCAAGTCGGGAAGGAGCCA...AAACGCTGCAGAAGTTACACAACTGCTCCCATAATCTGGACTCTCCAAAACCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp AGATTGTTAGCACCGAAGGCCACGGAGAGCATCGTCTGCATTTTGGCAGCTCCCGTAACCTCAGTGTATTaGGGCCAAATTCCACTCACT +
Preference number: 5 (lower is better)
Translates to: RLLAPKATESIVCILAAPVTSVY*GQIPLT
Trigger: AGTGAGTGGAATTTGGCCCAAATACACTGAGGTTAC...GGGAGCTGCCAAAATGCAGACGATGCTCTCCGTGGCCTTCGGTGCTAACAATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR CAA 90 bp CTGCAGCGTTTTGAGCTTGTGCATCCGGGGCAGCATGGTAGGCATTTCCCAACGGAACAAGCAGTGTCATaGGGCCACTCTTATCAATTT +
Preference number: 5 (lower is better)
Translates to: LQRFELVHPGQHGRHFPTEQAVS*GHSYQF
Trigger: AAATTGATAAGAGTGGCCCAATGACACTGCTTGTTC...CGTTGGGAAATGCCTACCATGCTGCCCCGGATGCACAAGCTCAAAACGCTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp AGTGGCCAGGCCCCAGATCTCCCCTTCCATGTGACCATCAATCAGGATGTTAGACATCTTCCACCTTTTTaGAGTTTCCGTACTGCCAGC +
Preference number: 5 (lower is better)
Translates to: SGQAPDLPFHVTINQDVRHLPPF*SFRTAS
Trigger: GCTGGCAGTACGGAAACTCAAAAAAGGTGGAAGATG...TCTAACATCCTGATTGATGGTCACATGGAAGGGGAGATCTGGGGCCTGGCCACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR CAA 90 bp GAGGCACCTCAGCATGGCCTCTGCAGTTGCTGGCTGGTAGCAGCAGCAGCAATACTTATTATATGCCGTTaGCCTCTTGGAGCTTCAAAA +
Preference number: 5 (lower is better)
Translates to: EAPQHGLCSCWLVAAAAILIICR*PLGASK
Trigger: TTTTGAAGCTCCAAGAGGCAAACGGCATATAATAAG...TATTGCTGCTGCTGCTACCAGCCAGCAACTGCAGAGGCCATGCTGAGGTGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp ATCATAAGAGAAACGGATGTTCGTCACGTGAGCCGAGTGACCGAAGTATCGCTTTGTGGATGGAAGGTGTaGTCCCTATCTGGCTGGTGG +
Preference number: 5 (lower is better)
Translates to: IIRETDVRHVSRVTEVSLCGWKV*SLSGWW
Trigger: CCACCAGCCAGATAGGGACAACACCTTCCATCCACA...AAGCGATACTTCGGTCACTCGGCTCACGTGACGAACATCCGTTTCTCTTATGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR CAA 90 bp AATGAAGTCACCTCAACTCCACTCAGGGTGGTACACCAAGGTGCAGCCTTGGGTACGGCTAAGAATCGGTaGTCTGGGCTGATTCTGATA +
Preference number: 5 (lower is better)
Translates to: NEVTSTPLRVVHQGAALGTAKNR*SGLILI
Trigger: TATCAGAATCAGCCCAGACAACCGATTCTTAGCCGT...ACCCAAGGCTGCACCTTGGTGTACCACCCTGAGTGGAGTTGAGGTGACTTCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp ACTTGTCATCATAAGAGAAACGGATGTTCGTCACGTGAGCCGAGTGACCGAAGTAACTTCTGCAGCGTTTaGAGCTTGTGCATCCGGGGC +
Preference number: 5 (lower is better)
Translates to: TCHHKRNGCSSREPSDRSNFCSV*SLCIRG
Trigger: GCCCCGGATGCACAAGCTCAAAACGCTGCAGAAGTT...ACTTCGGTCACTCGGCTCACGTGACGAACATCCGTTTCTCTTATGATGACAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR CAA 90 bp ATCTCCCAGGACGCTTGTCCAGGAGGCCCAGGTGATCTTCTCAATGACCACGGCATTAAAAGCTACATATaGGTTAGGGTAACCGAGGCT +
Preference number: 5 (lower is better)
Translates to: ISQDACPGGPGDLLNDHGIKSYI*VRVTEA
Trigger: AGCCTCGGTTACCCTAACCAATATGTAGCTTTTAAT...GCCGTGGTCATTGAGAAGATCACCTGGGCCTCCTGGACAAGCGTCCTGGGAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR CAA 90 bp AATGAAGTCACCTCAACTCCACTCAGGGTGGTACACCAAGGTGCAGCCTTGGGTGGGAAGAAACCTGCATaGTGGCAAATTCAGCGGATT +
Preference number: 5 (lower is better)
Translates to: NEVTSTPLRVVHQGAALGGKKPA*WQIQRI
Trigger: AATCCGCTGAATTTGCCACAATGCAGGTTTCTTCCC...ACCCAAGGCTGCACCTTGGTGTACCACCCTGAGTGGAGTTGAGGTGACTTCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR CAA 90 bp AATGAAGTCACCTCAACTCCACTCAGGGTGGTACACCAAGGTGCAGCCTTGGGTATCATCGCCACCAAATaGAGCAAAATCGGGAGACTG +
Preference number: 5 (lower is better)
Translates to: NEVTSTPLRVVHQGAALGIIATK*SKIGRL
Trigger: CAGTCTCCCGATTTTGCTCAATTTGGTGGCGATGAT...ACCCAAGGCTGCACCTTGGTGTACCACCCTGAGTGGAGTTGAGGTGACTTCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR CAA 90 bp TTCCACCTCTCTGATGAAGCATTTCCAAGCAGTAGATGTCCTCTGAGGCTCCAGTTTCACATCCCCTTTTaGCCCTTGTCCACCCTGCTC +
Preference number: 5 (lower is better)
Translates to: FHLSDEAFPSSRCPLRLQFHIPF*PLSTLL
Trigger: GAGCAGGGTGGACAAGGGCAAAAAGGGGATGTGAAA...CTGGAGCCTCAGAGGACATCTACTGCTTGGAAATGCTTCATCAGAGAGGTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673916.1
CDS TCA 90 bp GAAAGGACATCATTAATGCAGAGAAGAACGAGCAGGGAGGTACACTaGCAACACGCCTCGGCAACAAATTGTATTGCTGGGCCTTGGCTG +
Preference number: 5 (lower is better)
Translates to: ERTSLMQRRTSREVH*QHASATNCIAGPWL
Trigger: CAGCCAAGGCCCAGCAATACAATTTGTTGCCGAGGCGTGTTGTCAGTGTACCTCCCTGCTCGTTCTTCTCTGCATTAATGATGTCCTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493997.1
CDS CCA 90 bp AACGGGTGGTCTTTCTTCCACGGAAACTTCCTTCAGCTGCTGGTGTaGCTTGGTGCCTTCCATTTCCCTGATGCTCACAGCATAAATCTT +
Preference number: 5 (lower is better)
Translates to: NGWSFFHGNFLQLLV*LGAFHFPDAHSINL
Trigger: AAGATTTATGCTGTGAGCATCAGGGAAATGGAAGGCACCAAGCCACACCAGCAGCTGAAGGAAGTTTCCGTGGAAGAAAGACCACCCGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356458.7
ENST00000673695.1
CDS CCA 90 bp ATCTCAACAGCAGTCATCAGAAAAGCTTCCCTTTTTCTCCGAAGATaGTCAGTTGGAGTCCTCATGCCTCCATCTGCTGCTCCTCCAGGT +
Preference number: 5 (lower is better)
Translates to: ISTAVIRKASLFLRR*SVGVLMPPSAAPPG
Trigger: ACCTGGAGGAGCAGCAGATGGAGGCATGAGGACTCCAACTGACCATCTTCGGAGAAAAAGGGAAGCTTTTCTGATGACTGCTGTTGAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493997.1
CDS-3UTR CAA 90 bp TTTCGTTCACTGACCAGAAGGACTAATAGGCGTCTATGTGCTCAGAACCACCAGAGGATCAACATCGGCTaGTCTCGCTCTCGCACAATC +
Preference number: 5 (lower is better)
Translates to: FRSLTRRTNRRLCAQNHQRINIG*SRSRTI
Trigger: GATTGTGCGAGAGCGAGACAAGCCGATGTTGATCCT...CTGGTGGTTCTGAGCACATAGACGCCTATTAGTCCTTCTGGTCAGTGAACGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp CTTGTCAGCCAGGTCCCAGATCCGGGCTGTGCCATCGTTGCTGGCAGAGATGAAAATTTGGCTCCTCTCTaGAGACAAGGAAATTTAAAC +
Preference number: 5 (lower is better)
Translates to: LVSQVPDPGCAIVAGRDENLAPL*RQGNLN
Trigger: GTTTAAATTTCCTTGTCTCAAGAGAGGAGCCAAATT...TTCATCTCTGCCAGCAACGATGGCACAGCCCGGATCTGGGACCTGGCTGACAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR CAA 90 bp GAGGCACCTCAGCATGGCCTCTGCAGTTGCTGGCTGGTAGCAGCAGCAGCAATAGCGATCATAATTGATTaGAGCTTCTTGCTCAATATC +
Preference number: 5 (lower is better)
Translates to: EAPQHGLCSCWLVAAAAIAIIID*SFLLNI
Trigger: GATATTGAGCAAGAAGCTCAAATCAATTATGATCGC...TATTGCTGCTGCTGCTACCAGCCAGCAACTGCAGAGGCCATGCTGAGGTGCCTC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp TACAAGATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACAGGGAGCCTTTTCTCGTTaGAGGAAGGGCACTGCGTGG +
Preference number: 5 (lower is better)
Translates to: YKIGRHGYHSASPVTWLQGAFSR*RKGTAW
Trigger: CCACGCAGTGCCCTTCCTCAAACGAGAAAAGGCTCC...CTGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATCTTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp GAGGCACCTCAGCATGGCCTCTGCAGTTGCTGGCTGGTAGCAGCAGCAGCAATATATCTTTATGTCCTCTaGTTGTGGCTATCTTTTCTC +
Preference number: 5 (lower is better)
Translates to: EAPQHGLCSCWLVAAAAIYLYVL*LWLSFL
Trigger: GAGAAAAGATAGCCACAACAAGAGGACATAAAGATA...TATTGCTGCTGCTGCTACCAGCCAGCAACTGCAGAGGCCATGCTGAGGTGCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp ACTTGTCATCATAAGAGAAACGGATGTTCGTCACGTGAGCCGAGTGACCGAAGTACCACGTTTCTGTACTaGGGGTGCTGGTTCACTGTG +
Preference number: 5 (lower is better)
Translates to: TCHHKRNGCSSREPSDRSTTFLY*GCWFTV
Trigger: CACAGTGAACCAGCACCCCAAGTACAGAAACGTGGT...ACTTCGGTCACTCGGCTCACGTGACGAACATCCGTTTCTCTTATGATGACAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR CAA 90 bp ATCACGGTTTTGGAGAGTCCAGATTATGGGAGCAGTTGTGTAACTTCTGCAGCGCGTGGCATCACGGTTTaGGAGAGTCCAGATTATGGG +
Preference number: 5 (lower is better)
Translates to: ITVLESPDYGSSCVTSAARGITV*ESPDYG
Trigger: CCCATAATCTGGACTCTCCAAAACCGTGATGCCACG...CGCTGCAGAAGTTACACAACTGCTCCCATAATCTGGACTCTCCAAAACCGTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp AACTCCCATCGTTCAAGCCAACCGCTAAGGCTTTCCCATCAGGGGAAAAGGCACTTCTCTACTCCTTTTTaGAGTTTCCGTACTGCCAGC +
Preference number: 5 (lower is better)
Translates to: NSHRSSQPLRLSHQGKRHFSTPF*SFRTAS
Trigger: GCTGGCAGTACGGAAACTCAAAAAAGGAGTAGAGAA...GTGCCTTTTCCCCTGATGGGAAAGCCTTAGCGGTTGGCTTGAACGATGGGAGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000673746.1
CDS CCA 90 bp AATTCCCTGCCTTTCTTCCACGGAAACTTCCTTCAGCTGCTGGTGTaGCTTGGTGCCTTCCATTTCCCTGATGCTCACAGCATAAATCTT +
Preference number: 5 (lower is better)
Translates to: NSLPFFHGNFLQLLV*LGAFHFPDAHSINL
Trigger: AAGATTTATGCTGTGAGCATCAGGGAAATGGAAGGCACCAAGCCACACCAGCAGCTGAAGGAAGTTTCCGTGGAAGAAAGGCAGGGAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR CAA 90 bp AGTGGCCAGGCCCCAGATCTCCCCTTCCATGTGACCATCAATCAGGATGTTAGACTGATAATGTCGTCGTaGTGTCCCAGGAAGAATTTT +
Preference number: 5 (lower is better)
Translates to: SGQAPDLPFHVTINQDVRLIMSS*CPRKNF
Trigger: AAAATTCTTCCTGGGACACAACGACGACATTATCAG...TCTAACATCCTGATTGATGGTCACATGGAAGGGGAGATCTGGGGCCTGGCCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR CAA 90 bp ATCACGGTTTTGGAGAGTCCAGATTATGGGAGCAGTTGTGTAACTTCTGCAGCGGTTGCAACGAGAGTTTaGTCTGGGTGTAAGGCAAGG +
Preference number: 5 (lower is better)
Translates to: ITVLESPDYGSSCVTSAAVATRV*SGCKAR
Trigger: CCTTGCCTTACACCCAGACAAAACTCTCGTTGCAAC...CGCTGCAGAAGTTACACAACTGCTCCCATAATCTGGACTCTCCAAAACCGTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp GTAACCGAGGCTTCAAAATTCGTCAGCGGGCTACATTATCAGATAGGATTTCTTTGGCTCCTTCCCGACTaGGCCAGTTGCAACGAGAGT +
Preference number: 5 (lower is better)
Translates to: VTEASKFVSGLHYQIGFLWLLPD*ASCNES
Trigger: ACTCTCGTTGCAACTGGCCAAGTCGGGAAGGAGCCA...AAGAAATCCTATCTGATAATGTAGCCCGCTGACGAATTTTGAAGCCTCGGTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp GTCCTTCCAGACGTAGACATCTCCATTGATGGCACCCGTGAAAGTGAGATTGTTATGCAGACTGTGTTTTaGGCATCCAACCCCACAGAG +
Preference number: 5 (lower is better)
Translates to: VLPDVDISIDGTRESEIVMQTVF*ASNPTE
Trigger: CTCTGTGGGGTTGGATGCCAAAAACACAGTCTGCAT...AACAATCTCACTTTCACGGGTGCCATCAATGGAGATGTCTACGTCTGGAAGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR CAA 90 bp TTTCGTTCACTGACCAGAAGGACTAATAGGCGTCTATGTGCTCAGAACCACCAGCGGATAGAGAGGCCTTaGTATCCTTGTTCTGTCTCC +
Preference number: 5 (lower is better)
Translates to: FRSLTRRTNRRLCAQNHQRIERP*YPCSVS
Trigger: GGAGACAGAACAAGGATACAAAGGCCTCTCTATCCG...CTGGTGGTTCTGAGCACATAGACGCCTATTAGTCCTTCTGGTCAGTGAACGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp CACATACTTGTCATCATAAGAGAAACGGATGTTCGTCACGTGAGCCGAGTGACCGTTTCCAGCATGCCGTaGCTGACACCTTCTGGAATA +
Preference number: 5 (lower is better)
Translates to: HILVIIRETDVRHVSRVTVSSMP*LTPSGI
Trigger: TATTCCAGAAGGTGTCAGCAACGGCATGCTGGAAAC...GGTCACTCGGCTCACGTGACGAACATCCGTTTCTCTTATGATGACAAGTATGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR CAA 90 bp GCAGCCCACACAACTGGAAACTTTCAAAGGCACTTAATGGATATAAAACTCTGCGGAGCCTTTTCTCGTTaGAGGAAGGGCACTGCGTGG +
Preference number: 5 (lower is better)
Translates to: AAHTTGNFQRHLMDIKLCGAFSR*RKGTAW
Trigger: CCACGCAGTGCCCTTCCTCAAACGAGAAAAGGCTCC...GCAGAGTTTTATATCCATTAAGTGCCTTTGAAAGTTTCCAGTTGTGTGGGCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp GTCCTTCCAGACGTAGACATCTCCATTGATGGCACCCGTGAAAGTGAGATTGTTGCCCCCACCTGCTTGTaGCCAGAATTTGATGTGTTT +
Preference number: 5 (lower is better)
Translates to: VLPDVDISIDGTRESEIVAPTCL*PEFDVF
Trigger: AAACACATCAAATTCTGGCAACAAGCAGGTGGGGGC...AACAATCTCACTTTCACGGGTGCCATCAATGGAGATGTCTACGTCTGGAAGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR CAA 90 bp TGCTGCTCACCTTCCCATAAGCAGGTAACCGATGTCTTTCATTTAGGAAGCCTTTGCCCCACATACTTCTaGAATCTTGCGTGCTGTCCC +
Preference number: 5 (lower is better)
Translates to: CCSPSHKQVTDVFHLGSLCPTYF*NLACCP
Trigger: GGGACAGCACGCAAGATTCAAGAAGTATGTGGGGCA...AAGGCTTCCTAAATGAAAGACATCGGTTACCTGCTTATGGGAAGGTGAGCAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp TGTCCAAGTCATATTCCGTCATACAACCAACTCCAAGGAACTCTAACTCACTTTCGGGCTGTGCCATCGTaGCTGGCAGAGATGAAGAGG +
Preference number: 5 (lower is better)
Translates to: CPSHIPSYNQLQGTLTHFRAVPS*LAEMKR
Trigger: CCTCTTCATCTCTGCCAGCAACGATGGCACAGCCCG...AAAGTGAGTTAGAGTTCCTTGGAGTTGGTTGTATGACGGAATATGACTTGGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp TTTCGTTCACTGACCAGAAGGACTAATAGGCGTCTATGTGCTCAGAACCACCAGCACCAAGGTGCAGCCTaGGGTTACCCTCATTTATCT +
Preference number: 5 (lower is better)
Translates to: FRSLTRRTNRRLCAQNHQHQGAA*GYPHLS
Trigger: AGATAAATGAGGGTAACCCAAGGCTGCACCTTGGTG...CTGGTGGTTCTGAGCACATAGACGCCTATTAGTCCTTCTGGTCAGTGAACGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS GCA 90 bp ACTTTGTGCCAAATATCTTTAGTTTGTCCTTTCACATCCCCTTTTTaGCCTTGTCCACCCTGCTCTGTGCCTGAAGCTGGTCTGCATGGA +
Preference number: 5 (lower is better)
Translates to: TLCQISLVCPFTSPF*PCPPCSVPEAGLHG
Trigger: TCCATGCAGACCAGCTTCAGGCACAGAGCAGGGTGGACAAGGGCAAAAAGGGGATGTGAAAGGACAAACTAAAGATATTTGGCACAAAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673916.1
CDS-3UTR CAA 90 bp TACAAGATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACAGTCCCAGGAAGAATTTTaGGCTGTGCTCGCGGGTGTT +
Preference number: 5 (lower is better)
Translates to: YKIGRHGYHSASPVTWLQSQEEF*AVLAGV
Trigger: AACACCCGCGAGCACAGCCAAAAATTCTTCCTGGGA...CTGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATCTTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp TTGTGGCAAATTCAGCGGATTTTAAGTATTGACCCTTCGCGGTTGTGGATTCTGTCCCAGGAAGAATTTTaGGCTGTGCTCGCGGGTGTT +
Preference number: 5 (lower is better)
Translates to: LWQIQRILSIDPSRLWILSQEEF*AVLAGV
Trigger: AACACCCGCGAGCACAGCCAAAAATTCTTCCTGGGA...CAGAATCCACAACCGCGAAGGGTCAATACTTAAAATCCGCTGAATTTGCCACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR CAA 90 bp TGCTGCTCACCTTCCCATAAGCAGGTAACCGATGTCTTTCATTTAGGAAGCCTTCGGATAGAGAGGCCTTaGTATCCTTGTTCTGTCTCC +
Preference number: 5 (lower is better)
Translates to: CCSPSHKQVTDVFHLGSLRIERP*YPCSVS
Trigger: GGAGACAGAACAAGGATACAAAGGCCTCTCTATCCG...AAGGCTTCCTAAATGAAAGACATCGGTTACCTGCTTATGGGAAGGTGAGCAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp GTTGATGTAATTCACCCCCTTGGAGTGGAAGCACCGCAGCATGGAGAGGGTGTGGCGATCATAATTGATTaGAGCTTCTTGCTCAATATC +
Preference number: 5 (lower is better)
Translates to: VDVIHPLGVEAPQHGEGVAIIID*SFLLNI
Trigger: GATATTGAGCAAGAAGCTCAAATCAATTATGATCGC...CACACCCTCTCCATGCTGCGGTGCTTCCACTCCAAGGGGGTGAATTACATCAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR CAA 90 bp TACAAGATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACAGGAAGCCCCCACCTGCTaGTTGCCAGAATTTGATGTG +
Preference number: 5 (lower is better)
Translates to: YKIGRHGYHSASPVTWLQEAPTC*LPEFDV
Trigger: CACATCAAATTCTGGCAACAAGCAGGTGGGGGCTTC...CTGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATCTTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp AATGAAGTCACCTCAACTCCACTCAGGGTGGTACACCAAGGTGCAGCCTTGGGTCTTATTATATGCCGTTaGCCTCTTGGAGCTTCAAAA +
Preference number: 5 (lower is better)
Translates to: NEVTSTPLRVVHQGAALGLIICR*PLGASK
Trigger: TTTTGAAGCTCCAAGAGGCAAACGGCATATAATAAG...ACCCAAGGCTGCACCTTGGTGTACCACCCTGAGTGGAGTTGAGGTGACTTCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp GATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACAGAAAACACCACGTTTCTGTACTaGGGGTGCTGGTTCACTGTG +
Preference number: 5 (lower is better)
Translates to: DRQTWLSLCITSHMVTENTTFLY*GCWFTV
Trigger: CACAGTGAACCAGCACCCCAAGTACAGAAACGTGGT...GTTTTCTGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp TACAAGATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACAGATGGAGAGGGTGTGTTaGGTCATGGCGTCCCATATG +
Preference number: 5 (lower is better)
Translates to: YKIGRHGYHSASPVTWLQMERVC*VMASHM
Trigger: CATATGGGACGCCATGACCAAACACACCCTCTCCAT...CTGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATCTTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp AGCCCACACAACTGGAAACTTTCAAAGGCACTTAATGGATATAAAACTCTGCAACGGGCTGTGCCATCGTaGCTGGCAGAGATGAAGAGG +
Preference number: 5 (lower is better)
Translates to: SPHNWKLSKALNGYKTLQRAVPS*LAEMKR
Trigger: CCTCTTCATCTCTGCCAGCAACGATGGCACAGCCCG...TTGCAGAGTTTTATATCCATTAAGTGCCTTTGAAAGTTTCCAGTTGTGTGGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp TACAAGATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACAGGTCACACATGCGCAGTaGACATCAGCCTTGTCTGCA +
Preference number: 5 (lower is better)
Translates to: YKIGRHGYHSASPVTWLQVTHAQ*TSALSA
Trigger: TGCAGACAAGGCTGATGTCAACTGCGCATGTGTGAC...CTGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATCTTGTA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp AATTTTCGTTCACTGACCAGAAGGACTAATAGGCGTCTATGTGCTCAGAACCACGTCACACATGCGCAGTaGACATCAGCCTTGTCTGCA +
Preference number: 5 (lower is better)
Translates to: NFRSLTRRTNRRLCAQNHVTHAQ*TSALSA
Trigger: TGCAGACAAGGCTGATGTCAACTGCGCATGTGTGAC...GTGGTTCTGAGCACATAGACGCCTATTAGTCCTTCTGGTCAGTGAACGAAAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp AATTTTCGTTCACTGACCAGAAGGACTAATAGGCGTCTATGTGCTCAGAACCACCGTGGCATCACGGTTTaGGAGAGTCCAGATTATGGG +
Preference number: 5 (lower is better)
Translates to: NFRSLTRRTNRRLCAQNHRGITV*ESPDYG
Trigger: CCCATAATCTGGACTCTCCAAAACCGTGATGCCACG...GTGGTTCTGAGCACATAGACGCCTATTAGTCCTTCTGGTCAGTGAACGAAAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp GAGCATCGTCTGCATTTTGGCAGCTCCCAGGGACCCGATGACCCCTTTCTTGTATTTACCAGCTATTCCTaGGGTTTACAATTTGTTCTG +
Preference number: 5 (lower is better)
Translates to: EHRLHFGSSQGPDDPFLVFTSYS*GLQFVL
Trigger: CAGAACAAATTGTAAACCCAAGGAATAGCTGGTAAA...TACAAGAAAGGGGTCATCGGGTCCCTGGGAGCTGCCAAAATGCAGACGATGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR CAA 90 bp AATTTTCGTTCACTGACCAGAAGGACTAATAGGCGTCTATGTGCTCAGAACCACATTGACCCTTCGCGGTaGTGGATTCTGCGTGAACAC +
Preference number: 5 (lower is better)
Translates to: NFRSLTRRTNRRLCAQNHIDPSR*WILREH
Trigger: GTGTTCACGCAGAATCCACAACCGCGAAGGGTCAAT...GTGGTTCTGAGCACATAGACGCCTATTAGTCCTTCTGGTCAGTGAACGAAAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR CAA 90 bp TGCTGCTCACCTTCCCATAAGCAGGTAACCGATGTCTTTCATTTAGGAAGCCTTGTGGTCTTGATCCCCTaGAAAGCAGCAAACAAAGCC +
Preference number: 5 (lower is better)
Translates to: CCSPSHKQVTDVFHLGSLVVLIP*KAANKA
Trigger: GGCTTTGTTTGCTGCTTTCAAGGGGATCAAGACCAC...AAGGCTTCCTAAATGAAAGACATCGGTTACCTGCTTATGGGAAGGTGAGCAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR CAA 90 bp TACAAGATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACAGTCTTTGGATCCGAAATaGACAGTCTCTGCTGCCAGC +
Preference number: 5 (lower is better)
Translates to: YKIGRHGYHSASPVTWLQSLDPK*TVSAAS
Trigger: GCTGGCAGCAGAGACTGTCAATTTCGGATCCAAAGA...CTGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATCTTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356458.7
ENST00000673912.1
CDS-3UTR CAA 90 bp AATTTTCGTTCACTGACCAGAAGGACTAATAGGCGTCTATGTGCTCAGAACCACATGCAGACTGTGTTTTaGGCATCCAACCCCACAGAG +
Preference number: 5 (lower is better)
Translates to: NFRSLTRRTNRRLCAQNHMQTVF*ASNPTE
Trigger: CTCTGTGGGGTTGGATGCCAAAAACACAGTCTGCAT...GTGGTTCTGAGCACATAGACGCCTATTAGTCCTTCTGGTCAGTGAACGAAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp GTACAAGATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACACGGATAGAGAGGCCTTaGTATCCTTGTTCTGTCTCC +
Preference number: 5 (lower is better)
Translates to: VQDRQTWLSLCITSHMVTRIERP*YPCSVS
Trigger: GGAGACAGAACAAGGATACAAAGGCCTCTCTATCCG...TGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATCTTGTAC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp GCAGCCCACACAACTGGAAACTTTCAAAGGCACTTAATGGATATAAAACTCTGCATCAGCTCCACCTTCTaGGGGTGCAGTTTCCAGCAT +
Preference number: 5 (lower is better)
Translates to: AAHTTGNFQRHLMDIKLCISSTF*GCSFQH
Trigger: ATGCTGGAAACTGCACCCCAAGAAGGTGGAGCTGAT...GCAGAGTTTTATATCCATTAAGTGCCTTTGAAAGTTTCCAGTTGTGTGGGCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp AATTTTCGTTCACTGACCAGAAGGACTAATAGGCGTCTATGTGCTCAGAACCACGCCCCCACCTGCTTGTaGCCAGAATTTGATGTGTTT +
Preference number: 5 (lower is better)
Translates to: NFRSLTRRTNRRLCAQNHAPTCL*PEFDVF
Trigger: AAACACATCAAATTCTGGCAACAAGCAGGTGGGGGC...GTGGTTCTGAGCACATAGACGCCTATTAGTCCTTCTGGTCAGTGAACGAAAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp GTAACCGAGGCTTCAAAATTCGTCAGCGGGCTACATTATCAGATAGGATTTCTTGAAGCCCCCACCTGCTaGTTGCCAGAATTTGATGTG +
Preference number: 5 (lower is better)
Translates to: VTEASKFVSGLHYQIGFLEAPTC*LPEFDV
Trigger: CACATCAAATTCTGGCAACAAGCAGGTGGGGGCTTC...AAGAAATCCTATCTGATAATGTAGCCCGCTGACGAATTTTGAAGCCTCGGTTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp CCAACTCCAAGGAACTCTAACTCACTTTATAATTTTGATTTACCAGCTATTCCTTCGCTGTCCACCAGCTaGCTCTCCTGGGTCCCCACA +
Preference number: 5 (lower is better)
Translates to: PTPRNSNSLYNFDLPAIPSLSTS*LSWVPT
Trigger: TGTGGGGACCCAGGAGAGCAAGCTGGTGGACAGCGA...AGGAATAGCTGGTAAATCAAAATTATAAAGTGAGTTAGAGTTCCTTGGAGTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp GCAGCCCACACAACTGGAAACTTTCAAAGGCACTTAATGGATATAAAACTCTGCACCACGTTTCTGTACTaGGGGTGCTGGTTCACTGTG +
Preference number: 5 (lower is better)
Translates to: AAHTTGNFQRHLMDIKLCTTFLY*GCWFTV
Trigger: CACAGTGAACCAGCACCCCAAGTACAGAAACGTGGT...GCAGAGTTTTATATCCATTAAGTGCCTTTGAAAGTTTCCAGTTGTGTGGGCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp TGTCCAAGTCATATTCCGTCATACAACCAACTCCAAGGAACTCTAACTCACTTTTGTGGATGGAAGGTGTaGTCCCTATCTGGCTGGTGG +
Preference number: 5 (lower is better)
Translates to: CPSHIPSYNQLQGTLTHFCGWKV*SLSGWW
Trigger: CCACCAGCCAGATAGGGACAACACCTTCCATCCACA...AAAGTGAGTTAGAGTTCCTTGGAGTTGGTTGTATGACGGAATATGACTTGGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp GCAGCCCACACAACTGGAAACTTTCAAAGGCACTTAATGGATATAAAACTCTGCATGGAGAGGGTGTGTTaGGTCATGGCGTCCCATATG +
Preference number: 5 (lower is better)
Translates to: AAHTTGNFQRHLMDIKLCMERVC*VMASHM
Trigger: CATATGGGACGCCATGACCAAACACACCCTCTCCAT...GCAGAGTTTTATATCCATTAAGTGCCTTTGAAAGTTTCCAGTTGTGTGGGCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp TGCTGCTCACCTTCCCATAAGCAGGTAACCGATGTCTTTCATTTAGGAAGCCTTACGGCTAAGAATCGGTaGTCTGGGCTGATTCTGATA +
Preference number: 5 (lower is better)
Translates to: CCSPSHKQVTDVFHLGSLTAKNR*SGLILI
Trigger: TATCAGAATCAGCCCAGACAACCGATTCTTAGCCGT...AAGGCTTCCTAAATGAAAGACATCGGTTACCTGCTTATGGGAAGGTGAGCAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp TTTCGTTCACTGACCAGAAGGACTAATAGGCGTCTATGTGCTCAGAACCACCAGGCTTATAGGCACCTGTaGACACCTGAATGTATTTGC +
Preference number: 5 (lower is better)
Translates to: FRSLTRRTNRRLCAQNHQAYRHL*TPECIC
Trigger: GCAAATACATTCAGGTGTCAACAGGTGCCTATAAGC...CTGGTGGTTCTGAGCACATAGACGCCTATTAGTCCTTCTGGTCAGTGAACGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp GTAACCGAGGCTTCAAAATTCGTCAGCGGGCTACATTATCAGATAGGATTTCTTCAGTTGACATCAGCCTaGTCTGCATTTCGTGGCCAG +
Preference number: 5 (lower is better)
Translates to: VTEASKFVSGLHYQIGFLQLTSA*SAFRGQ
Trigger: CTGGCCACGAAATGCAGACAAGGCTGATGTCAACTG...AAGAAATCCTATCTGATAATGTAGCCCGCTGACGAATTTTGAAGCCTCGGTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp GCAGCCCACACAACTGGAAACTTTCAAAGGCACTTAATGGATATAAAACTCTGCAATTCCCAGTGTTTCTaGGTAGGTCAGCCTGCCTGC +
Preference number: 5 (lower is better)
Translates to: AAHTTGNFQRHLMDIKLCNSQCF*VGQPAC
Trigger: GCAGGCAGGCTGACCTACCAAGAAACACTGGGAATT...GCAGAGTTTTATATCCATTAAGTGCCTTTGAAAGTTTCCAGTTGTGTGGGCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS TCA 90 bp AATCTATTTATAAGACGGAAGATTAGGGAAACAATTTGCCTGCTTTaGAAGCAAGTGGCAGATGCACACGGTGGGGCCTCCTTTCCAGCA +
Preference number: 5 (lower is better)
Translates to: NLFIRRKIRETICLL*KQVADAHGGASFPA
Trigger: TGCTGGAAAGGAGGCCCCACCGTGTGCATCTGCCACTTGCTTTCAAAGCAGGCAAATTGTTTCCCTAATCTTCCGTCTTATAAATAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493997.1
CDS GCA 90 bp ACAGCACTGGCTAATGTCAATCCAAAATGTTCTCCTGGGCAATTCTaGAGGTATCCTGTTTTGGGAATGTGTCATAAGGCTTGGGAGCAA +
Preference number: 5 (lower is better)
Translates to: TALANVNPKCSPGQF*RYPVLGMCHKAWEQ
Trigger: TTGCTCCCAAGCCTTATGACACATTCCCAAAACAGGATACCTGCAGAATTGCCCAGGAGAACATTTTGGATTGACATTAGCCAGTGCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493997.1
CDS GCA 90 bp GCATTTCCAAGCAGTAGATGTCCTCTGAGGCTCCAGGGTACTTTGTaGCAAATATCTTTAGTTTGTCCTTTCACATCCCCTTTTTGCCCT +
Preference number: 5 (lower is better)
Translates to: AFPSSRCPLRLQGTL*QISLVCPFTSPFCP
Trigger: AGGGCAAAAAGGGGATGTGAAAGGACAAACTAAAGATATTTGGCACAAAGTACCCTGGAGCCTCAGAGGACATCTACTGCTTGGAAATGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673916.1
CDS CCA 90 bp AAGAGACACAGTCTGGACATTATAGGAATCCCATATGCATATATATaGCTCCTTCCCGACTTGGCCAGTTGCAACGAGAGTTTTGTCTGG +
Preference number: 5 (lower is better)
Translates to: KRHSLDIIGIPYAYI*LLPDLASCNESFVW
Trigger: CCAGACAAAACTCTCGTTGCAACTGGCCAAGTCGGGAAGGAGCCATATATATGCATATGGGATTCCTATAATGTCCAGACTGTGTCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356458.7
ENST00000491655.1
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp ATCACGGTTTTGGAGAGTCCAGATTATGGGAGCAGTTGTGTAACTTCTGCAGCGCTGATAATGTCGTCGTaGTGTCCCAGGAAGAATTTT +
Preference number: 5 (lower is better)
Translates to: ITVLESPDYGSSCVTSAALIMSS*CPRKNF
Trigger: AAAATTCTTCCTGGGACACAACGACGACATTATCAG...CGCTGCAGAAGTTACACAACTGCTCCCATAATCTGGACTCTCCAAAACCGTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp GTAACCGAGGCTTCAAAATTCGTCAGCGGGCTACATTATCAGATAGGATTTCTTGTTGCAACGAGAGTTTaGTCTGGGTGTAAGGCAAGG +
Preference number: 5 (lower is better)
Translates to: VTEASKFVSGLHYQIGFLVATRV*SGCKAR
Trigger: CCTTGCCTTACACCCAGACAAAACTCTCGTTGCAAC...AAGAAATCCTATCTGATAATGTAGCCCGCTGACGAATTTTGAAGCCTCGGTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp CTTCCACATGGTTATTTCAATGCAAGATCCGATCAGCATGAAGAGTCTAGTACATCCCGACTTGGCCAGTaGCAACGAGAGTTTTGTCTG +
Preference number: 5 (lower is better)
Translates to: LPHGYFNARSDQHEESSTSRLGQ*QREFCL
Trigger: CAGACAAAACTCTCGTTGCAACTGGCCAAGTCGGGA...TGTACTAGACTCTTCATGCTGATCGGATCTTGCATTGAAATAACCATGTGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp TGTCCAAGTCATATTCCGTCATACAACCAACTCCAAGGAACTCTAACTCACTTTTCCCGACTTGGCCAGTaGCAACGAGAGTTTTGTCTG +
Preference number: 5 (lower is better)
Translates to: CPSHIPSYNQLQGTLTHFSRLGQ*QREFCL
Trigger: CAGACAAAACTCTCGTTGCAACTGGCCAAGTCGGGA...AAAGTGAGTTAGAGTTCCTTGGAGTTGGTTGTATGACGGAATATGACTTGGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp GATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACAGAAAACCACTCCTCTCTGATGTaGTCCTTTCAACAGCGACAA +
Preference number: 5 (lower is better)
Translates to: DRQTWLSLCITSHMVTENHSSLM*SFQQRQ
Trigger: TTGTCGCTGTTGAAAGGACAACATCAGAGAGGAGTG...GTTTTCTGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp TGCTGCTCACCTTCCCATAAGCAGGTAACCGATGTCTTTCATTTAGGAAGCCTTCCAACTGTAACCAGTTaGTCAACATGGTGTGGGTTA +
Preference number: 5 (lower is better)
Translates to: CCSPSHKQVTDVFHLGSLPTVTS*STWCGL
Trigger: TAACCCACACCATGTTGACAAACTGGTTACAGTTGG...AAGGCTTCCTAAATGAAAGACATCGGTTACCTGCTTATGGGAAGGTGAGCAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp ATCACGGTTTTGGAGAGTCCAGATTATGGGAGCAGTTGTGTAACTTCTGCAGCGGAACAAGCAGTGTCATaGGGCCACTCTTATCAATTT +
Preference number: 5 (lower is better)
Translates to: ITVLESPDYGSSCVTSAAEQAVS*GHSYQF
Trigger: AAATTGATAAGAGTGGCCCAATGACACTGCTTGTTC...CGCTGCAGAAGTTACACAACTGCTCCCATAATCTGGACTCTCCAAAACCGTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp AGCAGCCCACACAACTGGAAACTTTCAAAGGCACTTAATGGATATAAAACTCTGTGCCCCACATACTTCTaGAATCTTGCGTGCTGTCCC +
Preference number: 5 (lower is better)
Translates to: SSPHNWKLSKALNGYKTLCPTYF*NLACCP
Trigger: GGGACAGCACGCAAGATTCAAGAAGTATGTGGGGCA...CAGAGTTTTATATCCATTAAGTGCCTTTGAAAGTTTCCAGTTGTGTGGGCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp CTTCCACATGGTTATTTCAATGCAAGATCCGATCAGCATGAAGAGTCTAGTACATGCCCCACATACTTCTaGAATCTTGCGTGCTGTCCC +
Preference number: 5 (lower is better)
Translates to: LPHGYFNARSDQHEESSTCPTYF*NLACCP
Trigger: GGGACAGCACGCAAGATTCAAGAAGTATGTGGGGCA...TGTACTAGACTCTTCATGCTGATCGGATCTTGCATTGAAATAACCATGTGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp CTTCCACATGGTTATTTCAATGCAAGATCCGATCAGCATGAAGAGTCTAGTACACAGTTGACATCAGCCTaGTCTGCATTTCGTGGCCAG +
Preference number: 5 (lower is better)
Translates to: LPHGYFNARSDQHEESSTQLTSA*SAFRGQ
Trigger: CTGGCCACGAAATGCAGACAAGGCTGATGTCAACTG...TGTACTAGACTCTTCATGCTGATCGGATCTTGCATTGAAATAACCATGTGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp TTGTGTGCAGGGGAAGACAGGGTACCTTTATTTTCTCAGAAACTCTTCAATCAACAGTTGACATCAGCCTaGTCTGCATTTCGTGGCCAG +
Preference number: 5 (lower is better)
Translates to: LCAGEDRVPLFSQKLFNQQLTSA*SAFRGQ
Trigger: CTGGCCACGAAATGCAGACAAGGCTGATGTCAACTG...TTGATTGAAGAGTTTCTGAGAAAATAAAGGTACCCTGTCTTCCCCTGCACACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR CAA 90 bp AGCCCACACAACTGGAAACTTTCAAAGGCACTTAATGGATATAAAACTCTGCAAAACTTCTGCAGCGTTTaGAGCTTGTGCATCCGGGGC +
Preference number: 5 (lower is better)
Translates to: SPHNWKLSKALNGYKTLQNFCSV*SLCIRG
Trigger: GCCCCGGATGCACAAGCTCAAAACGCTGCAGAAGTT...TTGCAGAGTTTTATATCCATTAAGTGCCTTTGAAAGTTTCCAGTTGTGTGGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp ACGGTTTTGGAGAGTCCAGATTATGGGAGCAGTTGTGTAACTTCTGCAGCGTTTAGATTATGGGAGCAGTaGTGTAACTTCTGCAGCGTT +
Preference number: 5 (lower is better)
Translates to: TVLESPDYGSSCVTSAAFRLWEQ*CNFCSV
Trigger: AACGCTGCAGAAGTTACACAACTGCTCCCATAATCT...AAACGCTGCAGAAGTTACACAACTGCTCCCATAATCTGGACTCTCCAAAACCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp GTCCTTCCAGACGTAGACATCTCCATTGATGGCACCCGTGAAAGTGAGATTGTTTTACAGAAAACAGAATaGGGACTGCATAGGGACTCT +
Preference number: 5 (lower is better)
Translates to: VLPDVDISIDGTRESEIVLQKTE*GLHRDS
Trigger: AGAGTCCCTATGCAGTCCCAATTCTGTTTTCTGTAA...AACAATCTCACTTTCACGGGTGCCATCAATGGAGATGTCTACGTCTGGAAGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR CAA 90 bp AGCCCACACAACTGGAAACTTTCAAAGGCACTTAATGGATATAAAACTCTGCAAGCCTGCTCGAATGGCTaGCGGGGGTTCTTTTTGTGT +
Preference number: 5 (lower is better)
Translates to: SPHNWKLSKALNGYKTLQACSNG*RGFFLC
Trigger: ACACAAAAAGAACCCCCGCAAGCCATTCGAGCAGGC...TTGCAGAGTTTTATATCCATTAAGTGCCTTTGAAAGTTTCCAGTTGTGTGGGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR CAA 90 bp GTACAAGATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACAAGAGAAAAGGAAGCTTaGTCAATGCTTCCCGCACAC +
Preference number: 5 (lower is better)
Translates to: VQDRQTWLSLCITSHMVTREKEA*SMLPAH
Trigger: GTGTGCGGGAAGCATTGACAAAGCTTCCTTTTCTCT...TGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATCTTGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR CAA 90 bp AGGAAACTCCCATCGTTCAAGCCAACCGCTAAGGCTTTCCCATCAGGGGAAAAGCCAAATATCTTTAGTTaGTCCTTTCACATCCCCTTT +
Preference number: 5 (lower is better)
Translates to: RKLPSFKPTAKAFPSGEKPNIFS*SFHIPF
Trigger: AAAGGGGATGTGAAAGGACAAACTAAAGATATTTGG...CTTTTCCCCTGATGGGAAAGCCTTAGCGGTTGGCTTGAACGATGGGAGTTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000673916.1
CDS GCA 90 bp CTGGGCAACAGCATAGACATCTACTGGGCCATCATTGGATCCCACTaGAAGGTAAGAACCATCTGGAGAAAATTTCATTTCATGAATGAC +
Preference number: 5 (lower is better)
Translates to: LGNSIDIYWAIIGSH*KVRTIWRKFHFMND
Trigger: GTCATTCATGAAATGAAATTTTCTCCAGATGGTTCTTACCTTGCAGTGGGATCCAATGATGGCCCAGTAGATGTCTATGCTGTTGCCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS GCA 90 bp CCTTTTTCTCCGAAGATGGTCAGTTGGAGTCCTCATGCCTCCATCTaGTGCTCCTCCAGGTCTCTAGCAATTTATAAATCTTCATTCATT +
Preference number: 5 (lower is better)
Translates to: PFSPKMVSWSPHASI*CSSRSLAIYKSSFI
Trigger: AATGAATGAAGATTTATAAATTGCTAGAGACCTGGAGGAGCAGCAGATGGAGGCATGAGGACTCCAACTGACCATCTTCGGAGAAAAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493997.1
CDS-3UTR CAA 90 bp AGCAGCCCACACAACTGGAAACTTTCAAAGGCACTTAATGGATATAAAACTCTGTCTTTGGATCCGAAATaGACAGTCTCTGCTGCCAGC +
Preference number: 5 (lower is better)
Translates to: SSPHNWKLSKALNGYKTLSLDPK*TVSAAS
Trigger: GCTGGCAGCAGAGACTGTCAATTTCGGATCCAAAGA...CAGAGTTTTATATCCATTAAGTGCCTTTGAAAGTTTCCAGTTGTGTGGGCTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356458.7
ENST00000673912.1
CDS-3UTR CAA 90 bp TGTCCAAGTCATATTCCGTCATACAACCAACTCCAAGGAACTCTAACTCACTTTATGCAGACTGTGTTTTaGGCATCCAACCCCACAGAG +
Preference number: 5 (lower is better)
Translates to: CPSHIPSYNQLQGTLTHFMQTVF*ASNPTE
Trigger: CTCTGTGGGGTTGGATGCCAAAAACACAGTCTGCAT...AAAGTGAGTTAGAGTTCCTTGGAGTTGGTTGTATGACGGAATATGACTTGGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp TACAAGATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACAGCAAATATCCCTCTTTTaGCAGTCAGGGCATTTCCAC +
Preference number: 5 (lower is better)
Translates to: YKIGRHGYHSASPVTWLQQISLF*QSGHFH
Trigger: GTGGAAATGCCCTGACTGCAAAAAGAGGGATATTTG...CTGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATCTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp GATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACAGAAAACGTAACCTCAGTGTATTaGGGCCAAATTCCACTCACT +
Preference number: 5 (lower is better)
Translates to: DRQTWLSLCITSHMVTENVTSVY*GQIPLT
Trigger: AGTGAGTGGAATTTGGCCCAAATACACTGAGGTTAC...GTTTTCTGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp AGCATATGTTTACAGCTGTATTGCTTCAAAACTGAAGATGAGAGGAGCAAGGGGTTCGCATCCACTGAGTaGATGTCAGTAACCTCAGTG +
Preference number: 5 (lower is better)
Translates to: SICLQLYCFKTEDERSKGFASTE*MSVTSV
Trigger: CACTGAGGTTACTGACATCAACTCAGTGGATGCGAA...CCCCTTGCTCCTCTCATCTTCAGTTTTGAAGCAATACAGCTGTAAACATATGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR CAA 90 bp AGCAGCCCACACAACTGGAAACTTTCAAAGGCACTTAATGGATATAAAACTCTGGTTTCCAGCATGCCGTaGCTGACACCTTCTGGAATA +
Preference number: 5 (lower is better)
Translates to: SSPHNWKLSKALNGYKTLVSSMP*LTPSGI
Trigger: TATTCCAGAAGGTGTCAGCAACGGCATGCTGGAAAC...CAGAGTTTTATATCCATTAAGTGCCTTTGAAAGTTTCCAGTTGTGTGGGCTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp TGTCCAAGTCATATTCCGTCATACAACCAACTCCAAGGAACTCTAACTCACTTTGTTTCCAGCATGCCGTaGCTGACACCTTCTGGAATA +
Preference number: 5 (lower is better)
Translates to: CPSHIPSYNQLQGTLTHFVSSMP*LTPSGI
Trigger: TATTCCAGAAGGTGTCAGCAACGGCATGCTGGAAAC...AAAGTGAGTTAGAGTTCCTTGGAGTTGGTTGTATGACGGAATATGACTTGGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp ACTTGTCATCATAAGAGAAACGGATGTTCGTCACGTGAGCCGAGTGACCGAAGTATTGATTTGAGCTTCTaGCTCAATATCAGAGTCCAG +
Preference number: 5 (lower is better)
Translates to: TCHHKRNGCSSREPSDRSIDLSF*LNIRVQ
Trigger: CTGGACTCTGATATTGAGCAAGAAGCTCAAATCAAT...ACTTCGGTCACTCGGCTCACGTGACGAACATCCGTTTCTCTTATGATGACAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR CAA 90 bp AGCAGCCCACACAACTGGAAACTTTCAAAGGCACTTAATGGATATAAAACTCTGGCCCCCACCTGCTTGTaGCCAGAATTTGATGTGTTT +
Preference number: 5 (lower is better)
Translates to: SSPHNWKLSKALNGYKTLAPTCL*PEFDVF
Trigger: AAACACATCAAATTCTGGCAACAAGCAGGTGGGGGC...CAGAGTTTTATATCCATTAAGTGCCTTTGAAAGTTTCCAGTTGTGTGGGCTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp GCAGCCCACACAACTGGAAACTTTCAAAGGCACTTAATGGATATAAAACTCTGCCATCTTCCACCTTTTTaGAGTTTCCGTACTGCCAGC +
Preference number: 5 (lower is better)
Translates to: AAHTTGNFQRHLMDIKLCHLPPF*SFRTAS
Trigger: GCTGGCAGTACGGAAACTCAAAAAAGGTGGAAGATG...GCAGAGTTTTATATCCATTAAGTGCCTTTGAAAGTTTCCAGTTGTGTGGGCTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp AGCCCACACAACTGGAAACTTTCAAAGGCACTTAATGGATATAAAACTCTGCAAAGCAGCACAGAGTCATaGTGCAGCCACCTCACGTTA +
Preference number: 5 (lower is better)
Translates to: SPHNWKLSKALNGYKTLQSSTES*CSHLTL
Trigger: TAACGTGAGGTGGCTGCACAATGACTCTGTGCTGCT...TTGCAGAGTTTTATATCCATTAAGTGCCTTTGAAAGTTTCCAGTTGTGTGGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp AGCAATCTCAATGTTTCTTTCTCATTTCGCAAGCATATGTTTACAGCTGTATTGAGCTGCTGGTGTGGCTaGGTGCCTTCCATTTCCCTG +
Preference number: 5 (lower is better)
Translates to: SNLNVSFSFRKHMFTAVLSCWCG*VPSISL
Trigger: CAGGGAAATGGAAGGCACCAAGCCACACCAGCAGCT...CAATACAGCTGTAAACATATGCTTGCGAAATGAGAAAGAAACATTGAGATTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR CAA 90 bp GTAACCGAGGCTTCAAAATTCGTCAGCGGGCTACATTATCAGATAGGATTTCTTTTGTTTAACAGCTTCTaGTCAGCCAGGTCCCAGATC +
Preference number: 5 (lower is better)
Translates to: VTEASKFVSGLHYQIGFLLFNSF*SARSQI
Trigger: GATCTGGGACCTGGCTGACAAGAAGCTGTTAAACAA...AAGAAATCCTATCTGATAATGTAGCCCGCTGACGAATTTTGAAGCCTCGGTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp TACAAGATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACAGGCTTATAGGCACCTGTaGACACCTGAATGTATTTGC +
Preference number: 5 (lower is better)
Translates to: YKIGRHGYHSASPVTWLQAYRHL*TPECIC
Trigger: GCAAATACATTCAGGTGTCAACAGGTGCCTATAAGC...CTGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATCTTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp AATTTTCGTTCACTGACCAGAAGGACTAATAGGCGTCTATGTGCTCAGAACCACAGATTATGGGAGCAGTaGTGTAACTTCTGCAGCGTT +
Preference number: 5 (lower is better)
Translates to: NFRSLTRRTNRRLCAQNHRLWEQ*CNFCSV
Trigger: AACGCTGCAGAAGTTACACAACTGCTCCCATAATCT...GTGGTTCTGAGCACATAGACGCCTATTAGTCCTTCTGGTCAGTGAACGAAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS TCA 90 bp TCTCTGCAGAGGATTTCGGAATTTTCTGATTCACCGCAACAAACATaGCCTGCTCTAAGTCAGGTTTGGCACCATGAAATACTGCAGTAT +
Preference number: 5 (lower is better)
Translates to: SLQRISEFSDSPQQT*PALSQVWHHEILQY
Trigger: ATACTGCAGTATTTCATGGTGCCAAACCTGACTTAGAGCAGGTCATGTTTGTTGCGGTGAATCAGAAAATTCCGAAATCCTCTGCAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493997.1
CDS CCA 90 bp TCTTATACCTCTGGGCAACAGCATAGACATCTACTGGGCCATCATTaGATCCCACTGCAAGGTAAGAACCATCTGGAGAAAATTTCATTT +
Preference number: 5 (lower is better)
Translates to: SYTSGQQHRHLLGHH*IPLQGKNHLEKISF
Trigger: AAATGAAATTTTCTCCAGATGGTTCTTACCTTGCAGTGGGATCCAATGATGGCCCAGTAGATGTCTATGCTGTTGCCCAGAGGTATAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp GCAGCCCACACAACTGGAAACTTTCAAAGGCACTTAATGGATATAAAACTCTGCCAAATATCCCTCTTTTaGCAGTCAGGGCATTTCCAC +
Preference number: 5 (lower is better)
Translates to: AAHTTGNFQRHLMDIKLCQISLF*QSGHFH
Trigger: GTGGAAATGCCCTGACTGCAAAAAGAGGGATATTTG...GCAGAGTTTTATATCCATTAAGTGCCTTTGAAAGTTTCCAGTTGTGTGGGCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp ATCACGGTTTTGGAGAGTCCAGATTATGGGAGCAGTTGTGTAACTTCTGCAGCGATTTTGGTTATTGGTTaGAAATCAGTGTCCCACAGT +
Preference number: 5 (lower is better)
Translates to: ITVLESPDYGSSCVTSAAILVIG*KSVSHS
Trigger: ACTGTGGGACACTGATTTCAAACCAATAACCAAAAT...CGCTGCAGAAGTTACACAACTGCTCCCATAATCTGGACTCTCCAAAACCGTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp TTTCGTTCACTGACCAGAAGGACTAATAGGCGTCTATGTGCTCAGAACCACCAGATTTTGGTTATTGGTTaGAAATCAGTGTCCCACAGT +
Preference number: 5 (lower is better)
Translates to: FRSLTRRTNRRLCAQNHQILVIG*KSVSHS
Trigger: ACTGTGGGACACTGATTTCAAACCAATAACCAAAAT...CTGGTGGTTCTGAGCACATAGACGCCTATTAGTCCTTCTGGTCAGTGAACGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp TGCTGCTCACCTTCCCATAAGCAGGTAACCGATGTCTTTCATTTAGGAAGCCTTATGAAACTAAGGGACTaGCTGCATTCTCCAATTTTC +
Preference number: 5 (lower is better)
Translates to: CCSPSHKQVTDVFHLGSLMKLRD*LHSPIF
Trigger: GAAAATTGGAGAATGCAGCAAGTCCCTTAGTTTCAT...AAGGCTTCCTAAATGAAAGACATCGGTTACCTGCTTATGGGAAGGTGAGCAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp CTTCCACATGGTTATTTCAATGCAAGATCCGATCAGCATGAAGAGTCTAGTACATTCGCATCCACTGAGTaGATGTCAGTAACCTCAGTG +
Preference number: 5 (lower is better)
Translates to: LPHGYFNARSDQHEESSTFASTE*MSVTSV
Trigger: CACTGAGGTTACTGACATCAACTCAGTGGATGCGAA...TGTACTAGACTCTTCATGCTGATCGGATCTTGCATTGAAATAACCATGTGGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp TTGTGGCAAATTCAGCGGATTTTAAGTATTGACCCTTCGCGGTTGTGGATTCTGGACTACTTCTCCAGCTaGTGTGTAGAACAGATTGTT +
Preference number: 5 (lower is better)
Translates to: LWQIQRILSIDPSRLWILDYFSS*CVEQIV
Trigger: AACAATCTGTTCTACACACAAGCTGGAGAAGTAGTC...CAGAATCCACAACCGCGAAGGGTCAATACTTAAAATCCGCTGAATTTGCCACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR CAA 90 bp TGTCCAAGTCATATTCCGTCATACAACCAACTCCAAGGAACTCTAACTCACTTTCACTCCTCTCTGATGTaGTCCTTTCAACAGCGACAA +
Preference number: 5 (lower is better)
Translates to: CPSHIPSYNQLQGTLTHFHSSLM*SFQQRQ
Trigger: TTGTCGCTGTTGAAAGGACAACATCAGAGAGGAGTG...AAAGTGAGTTAGAGTTCCTTGGAGTTGGTTGTATGACGGAATATGACTTGGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp GTAACCGAGGCTTCAAAATTCGTCAGCGGGCTACATTATCAGATAGGATTTCTTCCAACTGTAACCAGTTaGTCAACATGGTGTGGGTTA +
Preference number: 5 (lower is better)
Translates to: VTEASKFVSGLHYQIGFLPTVTS*STWCGL
Trigger: TAACCCACACCATGTTGACAAACTGGTTACAGTTGG...AAGAAATCCTATCTGATAATGTAGCCCGCTGACGAATTTTGAAGCCTCGGTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp AGCAGCCCACACAACTGGAAACTTTCAAAGGCACTTAATGGATATAAAACTCTGCATCTTCCACCTTTTTaGAGTTTCCGTACTGCCAGC +
Preference number: 5 (lower is better)
Translates to: SSPHNWKLSKALNGYKTLHLPPF*SFRTAS
Trigger: GCTGGCAGTACGGAAACTCAAAAAAGGTGGAAGATG...CAGAGTTTTATATCCATTAAGTGCCTTTGAAAGTTTCCAGTTGTGTGGGCTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp CCAACTCCAAGGAACTCTAACTCACTTTATAATTTTGATTTACCAGCTATTCCTTGTGGATGGAAGGTGTaGTCCCTATCTGGCTGGTGG +
Preference number: 5 (lower is better)
Translates to: PTPRNSNSLYNFDLPAIPCGWKV*SLSGWW
Trigger: CCACCAGCCAGATAGGGACAACACCTTCCATCCACA...AGGAATAGCTGGTAAATCAAAATTATAAAGTGAGTTAGAGTTCCTTGGAGTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp CTTCCACATGGTTATTTCAATGCAAGATCCGATCAGCATGAAGAGTCTAGTACATGGCCCAAGCTCACCTaGTTTAACAGCTTCTTGTCA +
Preference number: 5 (lower is better)
Translates to: LPHGYFNARSDQHEESSTWPKLT*FNSFLS
Trigger: TGACAAGAAGCTGTTAAACAAGGTGAGCTTGGGCCA...TGTACTAGACTCTTCATGCTGATCGGATCTTGCATTGAAATAACCATGTGGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp AGCAGCCCACACAACTGGAAACTTTCAAAGGCACTTAATGGATATAAAACTCTGTGGCCCAAGCTCACCTaGTTTAACAGCTTCTTGTCA +
Preference number: 5 (lower is better)
Translates to: SSPHNWKLSKALNGYKTLWPKLT*FNSFLS
Trigger: TGACAAGAAGCTGTTAAACAAGGTGAGCTTGGGCCA...CAGAGTTTTATATCCATTAAGTGCCTTTGAAAGTTTCCAGTTGTGTGGGCTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp ATCACGGTTTTGGAGAGTCCAGATTATGGGAGCAGTTGTGTAACTTCTGCAGCGTTTACCAGCTATTCCTaGGGTTTACAATTTGTTCTG +
Preference number: 5 (lower is better)
Translates to: ITVLESPDYGSSCVTSAAFTSYS*GLQFVL
Trigger: CAGAACAAATTGTAAACCCAAGGAATAGCTGGTAAA...CGCTGCAGAAGTTACACAACTGCTCCCATAATCTGGACTCTCCAAAACCGTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp TACAAGATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACAGTTACAGAAAACAGAATaGGGACTGCATAGGGACTCT +
Preference number: 5 (lower is better)
Translates to: YKIGRHGYHSASPVTWLQLQKTE*GLHRDS
Trigger: AGAGTCCCTATGCAGTCCCAATTCTGTTTTCTGTAA...CTGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATCTTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS GCA 90 bp TTTTCTCCGAAGATGGTCAGTTGGAGTCCTCATGCCTCCATCTGCTaGTCCTCCAGGTCTCTAGCAATTTATAAATCTTCATTCATTAAA +
Preference number: 5 (lower is better)
Translates to: FSPKMVSWSPHASIC*SSRSLAIYKSSFIK
Trigger: TTTAATGAATGAAGATTTATAAATTGCTAGAGACCTGGAGGAGCAGCAGATGGAGGCATGAGGACTCCAACTGACCATCTTCGGAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493997.1
CDS-3UTR CAA 90 bp CCAACTCCAAGGAACTCTAACTCACTTTATAATTTTGATTTACCAGCTATTCCTCTGCCATCGCCGTCTTaGGATCCGAAATTGACAGTC +
Preference number: 5 (lower is better)
Translates to: PTPRNSNSLYNFDLPAIPLPSPS*DPKLTV
Trigger: GACTGTCAATTTCGGATCCAAAGACGGCGATGGCAG...AGGAATAGCTGGTAAATCAAAATTATAAAGTGAGTTAGAGTTCCTTGGAGTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356458.7
ENST00000673912.1
CDS-3UTR CAA 90 bp AATTTTCGTTCACTGACCAGAAGGACTAATAGGCGTCTATGTGCTCAGAACCACATGAAACTAAGGGACTaGCTGCATTCTCCAATTTTC +
Preference number: 5 (lower is better)
Translates to: NFRSLTRRTNRRLCAQNHMKLRD*LHSPIF
Trigger: GAAAATTGGAGAATGCAGCAAGTCCCTTAGTTTCAT...GTGGTTCTGAGCACATAGACGCCTATTAGTCCTTCTGGTCAGTGAACGAAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp AGCCCACACAACTGGAAACTTTCAAAGGCACTTAATGGATATAAAACTCTGCAATTCGCATCCACTGAGTaGATGTCAGTAACCTCAGTG +
Preference number: 5 (lower is better)
Translates to: SPHNWKLSKALNGYKTLQFASTE*MSVTSV
Trigger: CACTGAGGTTACTGACATCAACTCAGTGGATGCGAA...TTGCAGAGTTTTATATCCATTAAGTGCCTTTGAAAGTTTCCAGTTGTGTGGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp CCAACTCCAAGGAACTCTAACTCACTTTATAATTTTGATTTACCAGCTATTCCTATCAGCTCCACCTTCTaGGGGTGCAGTTTCCAGCAT +
Preference number: 5 (lower is better)
Translates to: PTPRNSNSLYNFDLPAIPISSTF*GCSFQH
Trigger: ATGCTGGAAACTGCACCCCAAGAAGGTGGAGCTGAT...AGGAATAGCTGGTAAATCAAAATTATAAAGTGAGTTAGAGTTCCTTGGAGTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp GCAGCCCACACAACTGGAAACTTTCAAAGGCACTTAATGGATATAAAACTCTGCGACTACTTCTCCAGCTaGTGTGTAGAACAGATTGTT +
Preference number: 5 (lower is better)
Translates to: AAHTTGNFQRHLMDIKLCDYFSS*CVEQIV
Trigger: AACAATCTGTTCTACACACAAGCTGGAGAAGTAGTC...GCAGAGTTTTATATCCATTAAGTGCCTTTGAAAGTTTCCAGTTGTGTGGGCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp TACAAGATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACAGGCTTGTTGCCAGAATTaGATGTGTTTTATCCCAACT +
Preference number: 5 (lower is better)
Translates to: YKIGRHGYHSASPVTWLQACCQN*MCFIPT
Trigger: AGTTGGGATAAAACACATCAAATTCTGGCAACAAGC...CTGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATCTTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp GTAACCGAGGCTTCAAAATTCGTCAGCGGGCTACATTATCAGATAGGATTTCTTGAACAAGCAGTGTCATaGGGCCACTCTTATCAATTT +
Preference number: 5 (lower is better)
Translates to: VTEASKFVSGLHYQIGFLEQAVS*GHSYQF
Trigger: AAATTGATAAGAGTGGCCCAATGACACTGCTTGTTC...AAGAAATCCTATCTGATAATGTAGCCCGCTGACGAATTTTGAAGCCTCGGTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp CCAACTCCAAGGAACTCTAACTCACTTTATAATTTTGATTTACCAGCTATTCCTAGCAGCACAGAGTCATaGTGCAGCCACCTCACGTTA +
Preference number: 5 (lower is better)
Translates to: PTPRNSNSLYNFDLPAIPSSTES*CSHLTL
Trigger: TAACGTGAGGTGGCTGCACAATGACTCTGTGCTGCT...AGGAATAGCTGGTAAATCAAAATTATAAAGTGAGTTAGAGTTCCTTGGAGTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp GTAACCGAGGCTTCAAAATTCGTCAGCGGGCTACATTATCAGATAGGATTTCTTCAGAACTTCATATGTTaGACCCCGACAGATACAAAC +
Preference number: 5 (lower is better)
Translates to: VTEASKFVSGLHYQIGFLQNFIC*TPTDTN
Trigger: GTTTGTATCTGTCGGGGTCAAACATATGAAGTTCTG...AAGAAATCCTATCTGATAATGTAGCCCGCTGACGAATTTTGAAGCCTCGGTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp GCAGCCCACACAACTGGAAACTTTCAAAGGCACTTAATGGATATAAAACTCTGCCAGAACTTCATATGTTaGACCCCGACAGATACAAAC +
Preference number: 5 (lower is better)
Translates to: AAHTTGNFQRHLMDIKLCQNFIC*TPTDTN
Trigger: GTTTGTATCTGTCGGGGTCAAACATATGAAGTTCTG...GCAGAGTTTTATATCCATTAAGTGCCTTTGAAAGTTTCCAGTTGTGTGGGCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp AGCCCACACAACTGGAAACTTTCAAAGGCACTTAATGGATATAAAACTCTGCAATTGTTTAACAGCTTCTaGTCAGCCAGGTCCCAGATC +
Preference number: 5 (lower is better)
Translates to: SPHNWKLSKALNGYKTLQLFNSF*SARSQI
Trigger: GATCTGGGACCTGGCTGACAAGAAGCTGTTAAACAA...TTGCAGAGTTTTATATCCATTAAGTGCCTTTGAAAGTTTCCAGTTGTGTGGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp AATTTTCGTTCACTGACCAGAAGGACTAATAGGCGTCTATGTGCTCAGAACCACATTAAAAGCTACATATaGGTTAGGGTAACCGAGGCT +
Preference number: 5 (lower is better)
Translates to: NFRSLTRRTNRRLCAQNHIKSYI*VRVTEA
Trigger: AGCCTCGGTTACCCTAACCAATATGTAGCTTTTAAT...GTGGTTCTGAGCACATAGACGCCTATTAGTCCTTCTGGTCAGTGAACGAAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp TGCTGCTCACCTTCCCATAAGCAGGTAACCGATGTCTTTCATTTAGGAAGCCTTTTTTATAATCTGGACTaGACCTATATAGTTCGCCTG +
Preference number: 5 (lower is better)
Translates to: CCSPSHKQVTDVFHLGSLFYNLD*TYIVRL
Trigger: CAGGCGAACTATATAGGTCAAGTCCAGATTATAAAA...AAGGCTTCCTAAATGAAAGACATCGGTTACCTGCTTATGGGAAGGTGAGCAGCA
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp ACGGTTTTGGAGAGTCCAGATTATGGGAGCAGTTGTGTAACTTCTGCAGCGTTTTTTACCAGCTATTCCTaGGGTTTACAATTTGTTCTG +
Preference number: 5 (lower is better)
Translates to: TVLESPDYGSSCVTSAAFFTSYS*GLQFVL
Trigger: CAGAACAAATTGTAAACCCAAGGAATAGCTGGTAAA...AAACGCTGCAGAAGTTACACAACTGCTCCCATAATCTGGACTCTCCAAAACCGT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp GATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACAGAAAACGACACACGGACACTATaGCTCTTTAAATATGGTTGT +
Preference number: 5 (lower is better)
Translates to: DRQTWLSLCITSHMVTENDTRTL*LFKYGC
Trigger: ACAACCATATTTAAAGAGCAATAGTGTCCGTGTGTC...GTTTTCTGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp AATTTTCGTTCACTGACCAGAAGGACTAATAGGCGTCTATGTGCTCAGAACCACATTTTGGTTATTGGTTaGAAATCAGTGTCCCACAGT +
Preference number: 5 (lower is better)
Translates to: NFRSLTRRTNRRLCAQNHILVIG*KSVSHS
Trigger: ACTGTGGGACACTGATTTCAAACCAATAACCAAAAT...GTGGTTCTGAGCACATAGACGCCTATTAGTCCTTCTGGTCAGTGAACGAAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp GATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACAGAAAACGCGATCATAATTGATTaGAGCTTCTTGCTCAATATC +
Preference number: 5 (lower is better)
Translates to: DRQTWLSLCITSHMVTENAIIID*SFLLNI
Trigger: GATATTGAGCAAGAAGCTCAAATCAATTATGATCGC...GTTTTCTGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp CTTCCACATGGTTATTTCAATGCAAGATCCGATCAGCATGAAGAGTCTAGTACACTTTATGTCCTCTTGTaGTGGCTATCTTTTCTCCCT +
Preference number: 5 (lower is better)
Translates to: LPHGYFNARSDQHEESSTLYVLL*WLSFLP
Trigger: AGGGAGAAAAGATAGCCACAACAAGAGGACATAAAG...TGTACTAGACTCTTCATGCTGATCGGATCTTGCATTGAAATAACCATGTGGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp TGTCCAAGTCATATTCCGTCATACAACCAACTCCAAGGAACTCTAACTCACTTTCTTTATGTCCTCTTGTaGTGGCTATCTTTTCTCCCT +
Preference number: 5 (lower is better)
Translates to: CPSHIPSYNQLQGTLTHFLYVLL*WLSFLP
Trigger: AGGGAGAAAAGATAGCCACAACAAGAGGACATAAAG...AAAGTGAGTTAGAGTTCCTTGGAGTTGGTTGTATGACGGAATATGACTTGGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp TACAAGATAGGCAGACATGGTTATCACTCTGCATCACCAGTCACATGGTTACAGTATCTTTATGTCCTCTaGTTGTGGCTATCTTTTCTC +
Preference number: 5 (lower is better)
Translates to: YKIGRHGYHSASPVTWLQYLYVL*LWLSFL
Trigger: GAGAAAAGATAGCCACAACAAGAGGACATAAAGATA...CTGTAACCATGTGACTGGTGATGCAGAGTGATAACCATGTCTGCCTATCTTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp AGCCCACACAACTGGAAACTTTCAAAGGCACTTAATGGATATAAAACTCTGCAACCAACTGTAACCAGTTaGTCAACATGGTGTGGGTTA +
Preference number: 5 (lower is better)
Translates to: SPHNWKLSKALNGYKTLQPTVTS*STWCGL
Trigger: TAACCCACACCATGTTGACAAACTGGTTACAGTTGG...TTGCAGAGTTTTATATCCATTAAGTGCCTTTGAAAGTTTCCAGTTGTGTGGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp AGCATATGTTTACAGCTGTATTGCTTCAAAACTGAAGATGAGAGGAGCAAGGGGGCTTGTTGCCAGAATTaGATGTGTTTTATCCCAACT +
Preference number: 5 (lower is better)
Translates to: SICLQLYCFKTEDERSKGACCQN*MCFIPT
Trigger: AGTTGGGATAAAACACATCAAATTCTGGCAACAAGC...CCCCTTGCTCCTCTCATCTTCAGTTTTGAAGCAATACAGCTGTAAACATATGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR CAA 90 bp CCAACTCCAAGGAACTCTAACTCACTTTATAATTTTGATTTACCAGCTATTCCTCACCAAGGTGCAGCCTaGGGTTACCCTCATTTATCT +
Preference number: 5 (lower is better)
Translates to: PTPRNSNSLYNFDLPAIPHQGAA*GYPHLS
Trigger: AGATAAATGAGGGTAACCCAAGGCTGCACCTTGGTG...AGGAATAGCTGGTAAATCAAAATTATAAAGTGAGTTAGAGTTCCTTGGAGTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp GTAACCGAGGCTTCAAAATTCGTCAGCGGGCTACATTATCAGATAGGATTTCTTGACACACGGACACTATaGCTCTTTAAATATGGTTGT +
Preference number: 5 (lower is better)
Translates to: VTEASKFVSGLHYQIGFLDTRTL*LFKYGC
Trigger: ACAACCATATTTAAAGAGCAATAGTGTCCGTGTGTC...AAGAAATCCTATCTGATAATGTAGCCCGCTGACGAATTTTGAAGCCTCGGTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp AGCCCACACAACTGGAAACTTTCAAAGGCACTTAATGGATATAAAACTCTGCAAGACTACTTCTCCAGCTaGTGTGTAGAACAGATTGTT +
Preference number: 5 (lower is better)
Translates to: SPHNWKLSKALNGYKTLQDYFSS*CVEQIV
Trigger: AACAATCTGTTCTACACACAAGCTGGAGAAGTAGTC...TTGCAGAGTTTTATATCCATTAAGTGCCTTTGAAAGTTTCCAGTTGTGTGGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp AGCATATGTTTACAGCTGTATTGCTTCAAAACTGAAGATGAGAGGAGCAAGGGGTATCTTTATGTCCTCTaGTTGTGGCTATCTTTTCTC +
Preference number: 5 (lower is better)
Translates to: SICLQLYCFKTEDERSKGYLYVL*LWLSFL
Trigger: GAGAAAAGATAGCCACAACAAGAGGACATAAAGATA...CCCCTTGCTCCTCTCATCTTCAGTTTTGAAGCAATACAGCTGTAAACATATGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS-3UTR CAA 90 bp AGCAGCCCACACAACTGGAAACTTTCAAAGGCACTTAATGGATATAAAACTCTGCTTATTATATGCCGTTaGCCTCTTGGAGCTTCAAAA +
Preference number: 5 (lower is better)
Translates to: SSPHNWKLSKALNGYKTLLIICR*PLGASK
Trigger: TTTTGAAGCTCCAAGAGGCAAACGGCATATAATAAG...CAGAGTTTTATATCCATTAAGTGCCTTTGAAAGTTTCCAGTTGTGTGGGCTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp CCAACTCCAAGGAACTCTAACTCACTTTATAATTTTGATTTACCAGCTATTCCTTGGCCCAAGCTCACCTaGTTTAACAGCTTCTTGTCA +
Preference number: 5 (lower is better)
Translates to: PTPRNSNSLYNFDLPAIPWPKLT*FNSFLS
Trigger: TGACAAGAAGCTGTTAAACAAGGTGAGCTTGGGCCA...AGGAATAGCTGGTAAATCAAAATTATAAAGTGAGTTAGAGTTCCTTGGAGTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp CCAACTCCAAGGAACTCTAACTCACTTTATAATTTTGATTTACCAGCTATTCCTACGGCTAAGAATCGGTaGTCTGGGCTGATTCTGATA +
Preference number: 5 (lower is better)
Translates to: PTPRNSNSLYNFDLPAIPTAKNR*SGLILI
Trigger: TATCAGAATCAGCCCAGACAACCGATTCTTAGCCGT...AGGAATAGCTGGTAAATCAAAATTATAAAGTGAGTTAGAGTTCCTTGGAGTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp TGTCCAAGTCATATTCCGTCATACAACCAACTCCAAGGAACTCTAACTCACTTTATTAAAAGCTACATATaGGTTAGGGTAACCGAGGCT +
Preference number: 5 (lower is better)
Translates to: CPSHIPSYNQLQGTLTHFIKSYI*VRVTEA
Trigger: AGCCTCGGTTACCCTAACCAATATGTAGCTTTTAAT...AAAGTGAGTTAGAGTTCCTTGGAGTTGGTTGTATGACGGAATATGACTTGGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp GCAGCCCACACAACTGGAAACTTTCAAAGGCACTTAATGGATATAAAACTCTGCTTTTATAATCTGGACTaGACCTATATAGTTCGCCTG +
Preference number: 5 (lower is better)
Translates to: AAHTTGNFQRHLMDIKLCFYNLD*TYIVRL
Trigger: CAGGCGAACTATATAGGTCAAGTCCAGATTATAAAA...GCAGAGTTTTATATCCATTAAGTGCCTTTGAAAGTTTCCAGTTGTGTGGGCTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp AAAGTTTTGATGCAAATTAAAAGCTACATATTGGTTAGGGTAACCGAGGCTTCACAAATATCCCTCTTTTaGCAGTCAGGGCATTTCCAC +
Preference number: 5 (lower is better)
Translates to: KVLMQIKSYILVRVTEASQISLF*QSGHFH
Trigger: GTGGAAATGCCCTGACTGCAAAAAGAGGGATATTTG...TGAAGCCTCGGTTACCCTAACCAATATGTAGCTTTTAATTTGCATCAAAACTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp CTTCCACATGGTTATTTCAATGCAAGATCCGATCAGCATGAAGAGTCTAGTACAACATACTTTCTAAATTaGGCTCCTCTCTTGAGACAA +
Preference number: 5 (lower is better)
Translates to: LPHGYFNARSDQHEESSTTYFLN*APLLRQ
Trigger: TTGTCTCAAGAGAGGAGCCAAATTTAGAAAGTATGT...TGTACTAGACTCTTCATGCTGATCGGATCTTGCATTGAAATAACCATGTGGAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp AGCAGCCCACACAACTGGAAACTTTCAAAGGCACTTAATGGATATAAAACTCTGACATACTTTCTAAATTaGGCTCCTCTCTTGAGACAA +
Preference number: 5 (lower is better)
Translates to: SSPHNWKLSKALNGYKTLTYFLN*APLLRQ
Trigger: TTGTCTCAAGAGAGGAGCCAAATTTAGAAAGTATGT...CAGAGTTTTATATCCATTAAGTGCCTTTGAAAGTTTCCAGTTGTGTGGGCTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp AGCCCACACAACTGGAAACTTTCAAAGGCACTTAATGGATATAAAACTCTGCAAATTGATTTGAGCTTCTaGCTCAATATCAGAGTCCAG +
Preference number: 5 (lower is better)
Translates to: SPHNWKLSKALNGYKTLQIDLSF*LNIRVQ
Trigger: CTGGACTCTGATATTGAGCAAGAAGCTCAAATCAAT...TTGCAGAGTTTTATATCCATTAAGTGCCTTTGAAAGTTTCCAGTTGTGTGGGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp AAAGTTTTGATGCAAATTAAAAGCTACATATTGGTTAGGGTAACCGAGGCTTCAGCTTATAGGCACCTGTaGACACCTGAATGTATTTGC +
Preference number: 5 (lower is better)
Translates to: KVLMQIKSYILVRVTEASAYRHL*TPECIC
Trigger: GCAAATACATTCAGGTGTCAACAGGTGCCTATAAGC...TGAAGCCTCGGTTACCCTAACCAATATGTAGCTTTTAATTTGCATCAAAACTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp AGCCCACACAACTGGAAACTTTCAAAGGCACTTAATGGATATAAAACTCTGCAAGACACACGGACACTATaGCTCTTTAAATATGGTTGT +
Preference number: 5 (lower is better)
Translates to: SPHNWKLSKALNGYKTLQDTRTL*LFKYGC
Trigger: ACAACCATATTTAAAGAGCAATAGTGTCCGTGTGTC...TTGCAGAGTTTTATATCCATTAAGTGCCTTTGAAAGTTTCCAGTTGTGTGGGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS TCA 90 bp AAAGGAGCACAGATGTACCTGATTAATCATTGCATTATTCTGCCCTaGTTGACAGTGATGTTACACCCTGTAACTACTTCTATAAGAGAT +
Preference number: 5 (lower is better)
Translates to: KGAQMYLINHCIILP*LTVMLHPVTTSIRD
Trigger: ATCTCTTATAGAAGTAGTTACAGGGTGTAACATCACTGTCAATCAGGGCAGAATAATGCAATGATTAATCAGGTACATCTGTGCTCCTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493997.1
CDS-3UTR CAA 90 bp AAAGTTTTGATGCAAATTAAAAGCTACATATTGGTTAGGGTAACCGAGGCTTCAAAAAGGGAACAGTCTTaGGTAAGACTGGCAGCATTT +
Preference number: 5 (lower is better)
Translates to: KVLMQIKSYILVRVTEASKREQS*VRLAAF
Trigger: AAATGCTGCCAGTCTTACCAAAGACTGTTCCCTTTT...TGAAGCCTCGGTTACCCTAACCAATATGTAGCTTTTAATTTGCATCAAAACTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp CCAACTCCAAGGAACTCTAACTCACTTTATAATTTTGATTTACCAGCTATTCCTCAGAACTTCATATGTTaGACCCCGACAGATACAAAC +
Preference number: 5 (lower is better)
Translates to: PTPRNSNSLYNFDLPAIPQNFIC*TPTDTN
Trigger: GTTTGTATCTGTCGGGGTCAAACATATGAAGTTCTG...AGGAATAGCTGGTAAATCAAAATTATAAAGTGAGTTAGAGTTCCTTGGAGTTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp CCAACTCCAAGGAACTCTAACTCACTTTATAATTTTGATTTACCAGCTATTCCTATGAAACTAAGGGACTaGCTGCATTCTCCAATTTTC +
Preference number: 5 (lower is better)
Translates to: PTPRNSNSLYNFDLPAIPMKLRD*LHSPIF
Trigger: GAAAATTGGAGAATGCAGCAAGTCCCTTAGTTTCAT...AGGAATAGCTGGTAAATCAAAATTATAAAGTGAGTTAGAGTTCCTTGGAGTTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp AAAGTTTTGATGCAAATTAAAAGCTACATATTGGTTAGGGTAACCGAGGCTTCAGCTTGTTGCCAGAATTaGATGTGTTTTATCCCAACT +
Preference number: 5 (lower is better)
Translates to: KVLMQIKSYILVRVTEASACCQN*MCFIPT
Trigger: AGTTGGGATAAAACACATCAAATTCTGGCAACAAGC...TGAAGCCTCGGTTACCCTAACCAATATGTAGCTTTTAATTTGCATCAAAACTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp CCAACTCCAAGGAACTCTAACTCACTTTATAATTTTGATTTACCAGCTATTCCTAATTTGGCTCCTCTCTaGAGACAAGGAAATTTAAAC +
Preference number: 5 (lower is better)
Translates to: PTPRNSNSLYNFDLPAIPNLAPL*RQGNLN
Trigger: GTTTAAATTTCCTTGTCTCAAGAGAGGAGCCAAATT...AGGAATAGCTGGTAAATCAAAATTATAAAGTGAGTTAGAGTTCCTTGGAGTTGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp AAAGTTTTGATGCAAATTAAAAGCTACATATTGGTTAGGGTAACCGAGGCTTCAAATTTGGCTCCTCTCTaGAGACAAGGAAATTTAAAC +
Preference number: 5 (lower is better)
Translates to: KVLMQIKSYILVRVTEASNLAPL*RQGNLN
Trigger: GTTTAAATTTCCTTGTCTCAAGAGAGGAGCCAAATT...TGAAGCCTCGGTTACCCTAACCAATATGTAGCTTTTAATTTGCATCAAAACTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS-3UTR CAA 90 bp AAAGTTTTGATGCAAATTAAAAGCTACATATTGGTTAGGGTAACCGAGGCTTCATTTTATAATCTGGACTaGACCTATATAGTTCGCCTG +
Preference number: 5 (lower is better)
Translates to: KVLMQIKSYILVRVTEASFYNLD*TYIVRL
Trigger: CAGGCGAACTATATAGGTCAAGTCCAGATTATAAAA...TGAAGCCTCGGTTACCCTAACCAATATGTAGCTTTTAATTTGCATCAAAACTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS GCA 72 bp GCACAGCCCAGCGGGCCGGCCGCCACCATCATCCGCTaGAGCCGCCGCAGACAAGCCGCCGCCGCCGGTGTG +
Preference number: 6 (lower is better)
Translates to: AQPSGPAATIIR*SRRRQAAAAGV
Trigger: CACACCGGCGGCGGCGGCTTGTCTGCGGCGGCTGCAGCGGATGATGGTGGCGGCCGGCCCGCTGGGCTGTGC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356458.7
ENST00000673912.1
CDS TCA 72 bp CGGACCTGCAGGGGCTCAGCGCGCGGCGCAGGGCGCTaGTTTCCGCGGCGACACACAGGCACAGCCCAGCGG +
Preference number: 6 (lower is better)
Translates to: RTCRGSARGAGR*FPRRHTGTAQR
Trigger: CCGCTGGGCTGTGCCTGTGTGTCGCCGCGGAAATCAGCGCCCTGCGCCGCGCGCTGAGCCCCTGCAGGTCCG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356458.7
ENST00000673912.1
CDS CCA 72 bp TCCCCGCCTCCCGCACCCGGGGATGGACTTCGTCACTaGGGCGCCGCGGGAGACAGGTTCTTCCTCCAGCCG +
Preference number: 6 (lower is better)
Translates to: SPPPAPGDGLRH*GAAGDRFFLQP
Trigger: CGGCTGGAGGAAGAACCTGTCTCCCGCGGCGCCCCAGTGACGAAGTCCATCCCCGGGTGCGGGAGGCGGGGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356458.7
ENST00000673912.1
CDS CCA 72 bp CCTCAGCTGCCGGTTACTAGGCGAGATCTCGCCGCTTaGAAACAGCGACGCCCCGGAGGACTGGGGCCGCCC +
Preference number: 6 (lower is better)
Translates to: PQLPVTRRDLAA*KQRRPGGLGPP
Trigger: GGGCGGCCCCAGTCCTCCGGGGCGTCGCTGTTTCCAAGCGGCGAGATCTCGCCTAGTAACCGGCAGCTGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000356458.7
ENST00000673912.1
CDS GCA 72 bp TCCCAACAGCGATCACCCAGTTCGCTCACTGAAGTTTaGGGTGCGCCGGGGCTTCGCGGCAGGCGGCGGGAT +
Preference number: 6 (lower is better)
Translates to: SQQRSPSSLTEV*GAPGLRGRRRD
Trigger: ATCCCGCCGCCTGCCGCGAAGCCCCGGCGCACCGCAAACTTCAGTGAGCGAACTGGGTGATCGCTGTTGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356458.7
ENST00000673912.1
CDS GCA 72 bp GGGCGGGGCCACAACGCCGCGCTAGTGAACCTCAGCTaGCGGTTACTAGGCGAGATCTCGCCGCTTGGAAAC +
Preference number: 6 (lower is better)
Translates to: GRGHNAALVNLS*RLLGEISPLGN
Trigger: GTTTCCAAGCGGCGAGATCTCGCCTAGTAACCGGCAGCTGAGGTTCACTAGCGCGGCGTTGTGGCCCCGCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356458.7
ENST00000673912.1
CDS TCA 72 bp CTGCATATCCCAACAGCGATCACCCAGTTCGCTCACTaGAGTTTGCGGTGCGCCGGGGCTTCGCGGCAGGCG +
Preference number: 6 (lower is better)
Translates to: LHIPTAITQFAH*SLRCAGASRQA
Trigger: CGCCTGCCGCGAAGCCCCGGCGCACCGCAAACTTCAGTGAGCGAACTGGGTGATCGCTGTTGGGATATGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356458.7
ENST00000673912.1
CDS GCA 72 bp GCGCCGGGGCTTCGCGGCAGGCGGCGGGATTTATTCTaGGATAGCCTTGATTTGACAGGCAACCCGGGTGAG +
Preference number: 6 (lower is better)
Translates to: APGLRGRRRDLF*DSLDLTGNPGE
Trigger: CTCACCCGGGTTGCCTGTCAAATCAAGGCTATCGCAGAATAAATCCCGCCGCCTGCCGCGAAGCCCCGGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000491655.1
ENST00000673912.1
CDS TCA 72 bp TCCAGATCATCAGGGCTGTGTCGGCGCCGCCCACCGTaGGCAGCACAGAGTCATTGTGCAGCCACCTCACGT +
Preference number: 6 (lower is better)
Translates to: SRSSGLCRRRPP*AAQSHCAATSR
Trigger: ACGTGAGGTGGCTGCACAATGACTCTGTGCTGCTCACGGTGGGCGGCGCCGACACAGCCCTGATGATCTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS GCA 72 bp CCACGTCGGTGTCTGACTCCTCGCTGTCCACCAGCTTaGTCTCCTGGGTCCCCACAAACTCCCTGGTCCAGA +
Preference number: 6 (lower is better)
Translates to: PRRCLTPRCPPA*SPGSPQTPWSR
Trigger: TCTGGACCAGGGAGTTTGTGGGGACCCAGGAGAGCAAGCTGGTGGACAGCGAGGAGTCAGACACCGACGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS CAA 90 bp ATCAGGGCTGTGTCGGCGCCGCCCACCGTGAGCAGCACAGAGTCATaGTGCAGCCACCTCACGTTAGTGACATGTGCACTGTGCCCCACA +
Preference number: 6 (lower is better)
Translates to: IRAVSAPPTVSSTES*CSHLTLVTCALCPT
Trigger: TGTGGGGCACAGTGCACATGTCACTAACGTGAGGTGGCTGCACAATGACTCTGTGCTGCTCACGGTGGGCGGCGCCGACACAGCCCTGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS GCA 72 bp TCGGCGCCGCCCACCGTGAGCAGCACAGAGTCATTGTaGAGCCACCTCACGTTAGTGACATGTGCACTGTGC +
Preference number: 6 (lower is better)
Translates to: SAPPTVSSTESL*SHLTLVTCALC
Trigger: GCACAGTGCACATGTCACTAACGTGAGGTGGCTGCACAATGACTCTGTGCTGCTCACGGTGGGCGGCGCCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS CAA 72 bp GTGTCGGCGCCGCCCACCGTGAGCAGCACAGAGTCATaGTGCAGCCACCTCACGTTAGTGACATGTGCACTG +
Preference number: 6 (lower is better)
Translates to: VSAPPTVSSTES*CSHLTLVTCAL
Trigger: CAGTGCACATGTCACTAACGTGAGGTGGCTGCACAATGACTCTGTGCTGCTCACGGTGGGCGGCGCCGACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS CAA 90 bp GGGCTTCGCGGCAGGCGGCGGGATTTATTCTGCGATAGCCTTGATTaGACAGGCAACCCGGGTGAGCTCTGCCATCGCCGTCTTTGGATC +
Preference number: 6 (lower is better)
Translates to: GLRGRRRDLFCDSLD*TGNPGELCHRRLWI
Trigger: GATCCAAAGACGGCGATGGCAGAGCTCACCCGGGTTGCCTGTCAAATCAAGGCTATCGCAGAATAAATCCCGCCGCCTGCCGCGAAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000491655.1
ENST00000673912.1
CDS TCA 72 bp GCAGGCGGCGGGATTTATTCTGCGATAGCCTTGATTTaGCAGGCAACCCGGGTGAGCTCTGCCATCGCCGTC +
Preference number: 6 (lower is better)
Translates to: AGGGIYSAIALI*QATRVSSAIAV
Trigger: GACGGCGATGGCAGAGCTCACCCGGGTTGCCTGTCAAATCAAGGCTATCGCAGAATAAATCCCGCCGCCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000491655.1
ENST00000673912.1
CDS TCA 72 bp ACCGCCTCTTCCATGTTACAGCGGGCGATCAAGGCATaGTCAGCCAGGCTCCACAGCCTGACAGAGCGGTCA +
Preference number: 6 (lower is better)
Translates to: TASSMLQRAIKA*SARLHSLTERS
Trigger: TGACCGCTCTGTCAGGCTGTGGAGCCTGGCTGATCATGCCTTGATCGCCCGCTGTAACATGGAAGAGGCGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS TCA 72 bp CCTTCATGCCCAGGGCCAGCTGAGATCCGTCGGGGCTaGAAGCTACACTGCGAACCGCCTCTTCCATGTTAC +
Preference number: 6 (lower is better)
Translates to: PSCPGPAEIRRG*KLHCEPPLPCY
Trigger: GTAACATGGAAGAGGCGGTTCGCAGTGTAGCTTTCAGCCCCGACGGATCTCAGCTGGCCCTGGGCATGAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS TCA 72 bp GCTGTCATAGCCTCCATCCTCTTCCACGTCGGTGTCTaGCTCCTCGCTGTCCACCAGCTTGCTCTCCTGGGT +
Preference number: 6 (lower is better)
Translates to: AVIASILFHVGV*LLAVHQLALLG
Trigger: ACCCAGGAGAGCAAGCTGGTGGACAGCGAGGAGTCAGACACCGACGTGGAAGAGGATGGAGGCTATGACAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS CAA 72 bp GGCAGGCGGCGGGATTTATTCTGCGATAGCCTTGATTaGACAGGCAACCCGGGTGAGCTCTGCCATCGCCGT +
Preference number: 6 (lower is better)
Translates to: GRRRDLFCDSLD*TGNPGELCHRR
Trigger: ACGGCGATGGCAGAGCTCACCCGGGTTGCCTGTCAAATCAAGGCTATCGCAGAATAAATCCCGCCGCCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000491655.1
ENST00000673912.1
CDS CAA 90 bp TTCACCCCCTTGGAGTGGAAGCACCGCAGCATGGAGAGGGTGTGTTaGGTCATGGCGTCCCATATGTGGATGGAAGGTGTTGTCCCTGGG +
Preference number: 6 (lower is better)
Translates to: FTPLEWKHRSMERVC*VMASHMWMEGVVPG
Trigger: CCCAGGGACAACACCTTCCATCCACATATGGGACGCCATGACCAAACACACCCTCTCCATGCTGCGGTGCTTCCACTCCAAGGGGGTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673905.1
CDS TCA 72 bp ACAATGAAAGAGCCGTCCTTCATGCCCAGGGCCAGCTaGGATCCGTCGGGGCTGAAAGCTACACTGCGAACC +
Preference number: 6 (lower is better)
Translates to: TMKEPSFMPRAS*DPSGLKATLRT
Trigger: GGTTCGCAGTGTAGCTTTCAGCCCCGACGGATCTCAGCTGGCCCTGGGCATGAAGGACGGCTCTTTCATTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS TCA 72 bp CATACGGGCGCCCATGACAGGCCACCCACCCGTGTATaGACTGGAGTTTCAAGCTGTCCTCAGGAGCCTTTT +
Preference number: 6 (lower is better)
Translates to: HTGAHDRPPTRV*TGVSSCPQEPF
Trigger: AAAAGGCTCCTGAGGACAGCTTGAAACTCCAGTTCATACACGGGTGGGTGGCCTGTCATGGGCGCCCGTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493997.1
CDS TCA 72 bp GGTTTCACCCTGTTAGCCAGGATGGTCTCCATCTCCTaGCCTCGTGATCCGCACGCCTTGGTCTCCCAAAGT +
Preference number: 6 (lower is better)
Translates to: GFTLLARMVSIS*PRDPHALVSQS
Trigger: ACTTTGGGAGACCAAGGCGTGCGGATCACGAGGTCAGGAGATGGAGACCATCCTGGCTAACAGGGTGAAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493997.1
CDS GCA 72 bp ATGTCGTCATCGTGCCCCAGGTACAGCCTCTGGGAGTaGTGCTGCCGATTATACACGACAGCAACTGCAGCA +
Preference number: 6 (lower is better)
Translates to: MSSSCPRYSLWE*CCRLYTTATAA
Trigger: TGCTGCAGTTGCTGTCGTGTATAATCGGCAGCAGCACTCCCAGAGGCTGTACCTGGGGCACGATGACGACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356458.7
ENST00000493997.1
ENST00000673695.1
ENST00000673912.1
CDS GCA 72 bp GTGGCAGATGCACACGGTGGGGCCTCCTTTCCAGCATaGTGCAGCCTCATGACAAACGGTGCTTCTGATTCT +
Preference number: 6 (lower is better)
Translates to: VADAHGGASFPA*CSLMTNGASDS
Trigger: AGAATCAGAAGCACCGTTTGTCATGAGGCTGCAGCATGCTGGAAAGGAGGCCCCACCGTGTGCATCTGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493997.1
CDS CCA 72 bp GGAAGCACCGCAGCATGGAGAGGGTGTGTTTGGTCATaGCGTCCCATATGTGGATGGAAGGTGTTGTCCCTG +
Preference number: 6 (lower is better)
Translates to: GSTAAWRGCVWS*RPICGWKVLSL
Trigger: CAGGGACAACACCTTCCATCCACATATGGGACGCCATGACCAAACACACCCTCTCCATGCTGCGGTGCTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673905.1
CDS CAA 90 bp GCCCAGAGCTCACCCTCGCAGTGGCCCTGTAGGATCAACATCGGCTaGTCTCGCTCTCGCACAATCACTTCAAATATCTCACTGTCCTGG +
Preference number: 6 (lower is better)
Translates to: AQSSPSQWPCRINIG*SRSRTITSNISLSW
Trigger: CCAGGACAGTGAGATATTTGAAGTGATTGTGCGAGAGCGAGACAAGCCGATGTTGATCCTACAGGGCCACTGCGAGGGTGAGCTCTGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS TCA 72 bp CACTTGAGCTTTGGAGGTGGAGGGTGCAGTGAGCAGTaGTCATGCCATGGCACTCCAGACTGGATGACAGAG +
Preference number: 6 (lower is better)
Translates to: HLSFGGGGCSEQ*SCHGTPDWMTE
Trigger: CTCTGTCATCCAGTCTGGAGTGCCATGGCATGATCACTGCTCACTGCACCCTCCACCTCCAAAGCTCAAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000673655.1
ENST00000674035.1
CDS CCA 72 bp CTGAGAATGTCGTCATCGTGCCCCAGGTACAGCCTCTaGGAGTGCTGCTGCCGATTATACACGACAGCAACT +
Preference number: 6 (lower is better)
Translates to: LRMSSSCPRYSL*ECCCRLYTTAT
Trigger: AGTTGCTGTCGTGTATAATCGGCAGCAGCACTCCCAGAGGCTGTACCTGGGGCACGATGACGACATTCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356458.7
ENST00000493997.1
ENST00000673695.1
ENST00000673912.1
CDS CCA 72 bp GGTGTTGTCCCTGGGGTTTCCGTAATATCACCTATCTaGCTGGTGGCCACCACGTTTCTGTACTTGGGGTGC +
Preference number: 6 (lower is better)
Translates to: GVVPGVSVISPI*LVATTFLYLGC
Trigger: GCACCCCAAGTACAGAAACGTGGTGGCCACCAGCCAGATAGGTGATATTACGGAAACCCCAGGGACAACACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673905.1
CDS GCA 72 bp ACGGGTGGTCTTTCTTCCACGGAAACTTCCTTCAGCTaGTGGTGTGGCTTGGTGCCTTCCATTTCCCTGATG +
Preference number: 6 (lower is better)
Translates to: TGGLSSTETSFS*WCGLVPSISLM
Trigger: CATCAGGGAAATGGAAGGCACCAAGCCACACCAGCAGCTGAAGGAAGTTTCCGTGGAAGAAAGACCACCCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356458.7
ENST00000673695.1
CDS GCA 72 bp GGAAACAATTTGCCTGCTTTGAAAGCAAGTGGCAGATaGACACGGTGGGGCCTCCTTTCCAGCATGCTGCAG +
Preference number: 6 (lower is better)
Translates to: GNNLPALKASGR*TRWGLLSSMLQ
Trigger: CTGCAGCATGCTGGAAAGGAGGCCCCACCGTGTGCATCTGCCACTTGCTTTCAAAGCAGGCAAATTGTTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493997.1
CDS GCA 72 bp TGTCCTTTCACATCCCCTTTTTGCCCTTGTCCACCCTaGTCTGTGCCTGAAGCTGGTCTGCATGGAGAGCAT +
Preference number: 6 (lower is better)
Translates to: CPFTSPFCPCPP*SVPEAGLHGEH
Trigger: ATGCTCTCCATGCAGACCAGCTTCAGGCACAGAGCAGGGTGGACAAGGGCAAAAAGGGGATGTGAAAGGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673916.1
CDS CCA 72 bp CGCTCTCGCACAATCACTTCAAATATCTCACTGTCCTaGGTCCCTGCTAGAAGGCGGTCTGCTTTCCAGCAC +
Preference number: 6 (lower is better)
Translates to: RSRTITSNISLS*VPARRRSAFQH
Trigger: GTGCTGGAAAGCAGACCGCCTTCTAGCAGGGACCCAGGACAGTGAGATATTTGAAGTGATTGTGCGAGAGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS CCA 72 bp ACTGGCAGCATTTACGTCAGTTATATCGCTATGTGCTaGCCAGATTCCCTCACAGGTGGGCCCCAGGACACA +
Preference number: 6 (lower is better)
Translates to: TGSIYVSYIAMC*PDSLTGGPQDT
Trigger: TGTGTCCTGGGGCCCACCTGTGAGGGAATCTGGCCAGCACATAGCGATATAACTGACGTAAATGCTGCCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS CCA 72 bp GATGCCACCACAGCTACCAACCATGCTCCTCCTCTGTaGAGAAATCTCACTTCCTGGGCGATGAGTGGTACA +
Preference number: 6 (lower is better)
Translates to: DATTATNHAPPL*RNLTSWAMSGT
Trigger: TGTACCACTCATCGCCCAGGAAGTGAGATTTCTCCACAGAGGAGGAGCATGGTTGGTAGCTGTGGTGGCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493997.1
CDS CCA 72 bp CATGGCGTCCCATATGTGGATGGAAGGTGTTGTCCCTaGGGTTTCCGTAATATCACCTATCTGGCTGGTGGC +
Preference number: 6 (lower is better)
Translates to: HGVPYVDGRCCP*GFRNITYLAGG
Trigger: GCCACCAGCCAGATAGGTGATATTACGGAAACCCCAGGGACAACACCTTCCATCCACATATGGGACGCCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673905.1
CDS CCA 72 bp CCTTTCTTCCACGGAAACTTCCTTCAGCTGCTGGTGTaGCTTGGTGCCTTCCATTTCCCTGATGCTCACAGC +
Preference number: 6 (lower is better)
Translates to: PFFHGNFLQLLV*LGAFHFPDAHS
Trigger: GCTGTGAGCATCAGGGAAATGGAAGGCACCAAGCCACACCAGCAGCTGAAGGAAGTTTCCGTGGAAGAAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS CAA 72 bp GGCTCCTTCCCGACTTGGCCAGTTGCAACGAGAGTTTaGTCTGGGTGTAAGGCAAGGCTGATAATGTCGTCG +
Preference number: 6 (lower is better)
Translates to: GSFPTWPVATRV*SGCKARLIMSS
Trigger: CGACGACATTATCAGCCTTGCCTTACACCCAGACAAAACTCTCGTTGCAACTGGCCAAGTCGGGAAGGAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS TCA 72 bp CTCGCTATTTTCCAGAGTCCTAAGATAGCGGTTCTCTaGGTGTGGTTCCCGACCAGCAACGTCAGCTGCATC +
Preference number: 6 (lower is better)
Translates to: LAIFQSPKIAVL*VWFPTSNVSCI
Trigger: GATGCAGCTGACGTTGCTGGTCGGGAACCACACTCAGAGAACCGCTATCTTAGGACTCTGGAAAATAGCGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490828.5
CDS GCA 72 bp ATTCCCTGCCTTTCTTCCACGGAAACTTCCTTCAGCTaGTGGTGTGGCTTGGTGCCTTCCATTTCCCTGATG +
Preference number: 6 (lower is better)
Translates to: IPCLSSTETSFS*WCGLVPSISLM
Trigger: CATCAGGGAAATGGAAGGCACCAAGCCACACCAGCAGCTGAAGGAAGTTTCCGTGGAAGAAAGGCAGGGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673912.1
CDS CCA 72 bp CCCAGGAAATATCAAAAATCCTGTCAGAATGGCCGGTaGCTGACGCCAGAAGTTTTCCCTTCCTCCAGTCCC +
Preference number: 6 (lower is better)
Translates to: PRKYQKSCQNGR*LTPEVFPSSSP
Trigger: GGGACTGGAGGAAGGGAAAACTTCTGGCGTCAGCCACCGGCCATTCTGACAGGATTTTTGATATTTCCTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS CCA 72 bp TCTTCCAACCTGCCCAGTAGCCACATAGTCCTTCACTaGATGGATGGTCAGGCTGAGAATGTCGTCATCGTG +
Preference number: 6 (lower is better)
Translates to: SSNLPSSHIVLH*MDGQAENVVIV
Trigger: CACGATGACGACATTCTCAGCCTGACCATCCATCCAGTGAAGGACTATGTGGCTACTGGGCAGGTTGGAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356458.7
ENST00000493997.1
ENST00000673695.1
ENST00000673912.1
CDS CCA 72 bp TCTTTCTTCCACGGAAACTTCCTTCAGCTGCTGGTGTaGCTTGGTGCCTTCCATTTCCCTGATGCTCACAGC +
Preference number: 6 (lower is better)
Translates to: SFFHGNFLQLLV*LGAFHFPDAHS
Trigger: GCTGTGAGCATCAGGGAAATGGAAGGCACCAAGCCACACCAGCAGCTGAAGGAAGTTTCCGTGGAAGAAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000356458.7
ENST00000673695.1
CDS CCA 72 bp CAACACGCCTCGGCAACAAATTGTATTGCTGGGCCTTaGCTGCCAACTATTTTGACCCCTGATCAGGGTTGG +
Preference number: 6 (lower is better)
Translates to: QHASATNCIAGP*LPTILTPDQGW
Trigger: CCAACCCTGATCAGGGGTCAAAATAGTTGGCAGCCAAGGCCCAGCAATACAATTTGTTGCCGAGGCGTGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493997.1
CDS CAA 72 bp GCTGATAATGTCGTCGTTGTGTCCCAGGAAGAATTTTaGGCTGTGCTCGCGGGTGTTGTAAACCACCCCGAC +
Preference number: 6 (lower is better)
Translates to: ADNVVVVSQEEF*AVLAGVVNHPD
Trigger: GTCGGGGTGGTTTACAACACCCGCGAGCACAGCCAAAAATTCTTCCTGGGACACAACGACGACATTATCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS CAA 72 bp GCTCCACCTTCTTGGGGTGCAGTTTCCAGCATGCCGTaGCTGACACCTTCTGGAATAAACCTCCACTGGAAA +
Preference number: 6 (lower is better)
Translates to: APPSWGAVSSMP*LTPSGINLHWK
Trigger: TTTCCAGTGGAGGTTTATTCCAGAAGGTGTCAGCAACGGCATGCTGGAAACTGCACCCCAAGAAGGTGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356458.7
ENST00000493997.1
ENST00000673695.1
ENST00000673912.1
CDS TCA 72 bp TTCAGATCCTGCACAGACTTGGAGGCTGAGCCTGAGTaGGACAAGAGACTCCCTTGTGACCTTTTCCTCAAG +
Preference number: 6 (lower is better)
Translates to: FRSCTDLEAEPE*DKRLPCDLFLK
Trigger: CTTGAGGAAAAGGTCACAAGGGAGTCTCTTGTCTCACTCAGGCTCAGCCTCCAAGTCTGTGCAGGATCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490828.5
CDS GCA 72 bp CTGGGAGTGCTGCTGCCGATTATACACGACAGCAACTaGAGCAATGTGGTAGACTACTTCTCCAGCTTGTGT +
Preference number: 6 (lower is better)
Translates to: LGVLLPIIHDSN*SNVVDYFSSLC
Trigger: ACACAAGCTGGAGAAGTAGTCTACCACATTGCTGCAGTTGCTGTCGTGTATAATCGGCAGCAGCACTCCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356458.7
ENST00000493997.1
ENST00000673695.1
ENST00000673912.1
CDS CCA 72 bp AACCATGCTCCTCCTCTGTGGAGAAATCTCACTTCCTaGGCGATGAGTGGTACAGAACAATCACCCTTGCCA +
Preference number: 6 (lower is better)
Translates to: NHAPPLWRNLTS*AMSGTEQSPLP
Trigger: TGGCAAGGGTGATTGTTCTGTACCACTCATCGCCCAGGAAGTGAGATTTCTCCACAGAGGAGGAGCATGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493997.1
CDS CCA 72 bp ATGGAGAGGGTGTGTTTGGTCATGGCGTCCCATATGTaGATGGAAGGTGTTGTCCCTGGGGTTTCCGTAATA +
Preference number: 6 (lower is better)
Translates to: MERVCLVMASHM*MEGVVPGVSVI
Trigger: TATTACGGAAACCCCAGGGACAACACCTTCCATCCACATATGGGACGCCATGACCAAACACACCCTCTCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673905.1
CDS CAA 72 bp TCACCCTCGCAGTGGCCCTGTAGGATCAACATCGGCTaGTCTCGCTCTCGCACAATCACTTCAAATATCTCA +
Preference number: 6 (lower is better)
Translates to: SPSQWPCRINIG*SRSRTITSNIS
Trigger: TGAGATATTTGAAGTGATTGTGCGAGAGCGAGACAAGCCGATGTTGATCCTACAGGGCCACTGCGAGGGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS CAA 72 bp CAGGGAGGTACACTGACAACACGCCTCGGCAACAAATaGTATTGCTGGGCCTTGGCTGCCAACTATTTTGAC +
Preference number: 6 (lower is better)
Translates to: QGGTLTTRLGNK*YCWALAANYFD
Trigger: GTCAAAATAGTTGGCAGCCAAGGCCCAGCAATACAATTTGTTGCCGAGGCGTGTTGTCAGTGTACCTCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493997.1
CDS CAA 90 bp CATATATATGGCTCCTTCCCGACTTGGCCAGTTGCAACGAGAGTTTaGTCTGGGTGTAAGGCAAGGCTGATAATGTCGTCGTTGTGTCCC +
Preference number: 6 (lower is better)
Translates to: HIYGSFPTWPVATRV*SGCKARLIMSSLCP
Trigger: GGGACACAACGACGACATTATCAGCCTTGCCTTACACCCAGACAAAACTCTCGTTGCAACTGGCCAAGTCGGGAAGGAGCCATATATATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS TCA 72 bp ATGGAGCAGGAGGTGTCAGAGGCAAGGCTAACATATTaGCGTGAACATGTACAAGTGGAACCCCAGGTGTCA +
Preference number: 6 (lower is better)
Translates to: MEQEVSEARLTY*REHVQVEPQVS
Trigger: TGACACCTGGGGTTCCACTTGTACATGTTCACGTCAATATGTTAGCCTTGCCTCTGACACCTCCTGCTCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493997.1
CDS GCA 72 bp AGAGTCATTGTGCAGCCACCTCACGTTAGTGACATGTaGACTGTGCCCCACATACTTCTTGAATCTTGCGTG +
Preference number: 6 (lower is better)
Translates to: RVIVQPPHVSDM*TVPHILLESCV
Trigger: CACGCAAGATTCAAGAAGTATGTGGGGCACAGTGCACATGTCACTAACGTGAGGTGGCTGCACAATGACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS GCA 72 bp GCACAGCCAGCCAGAAGCAGGTTAATTGTTCAGCCTTaGTCTATAAATGAGGCTGGCAGTGATCGAGACACA +
Preference number: 6 (lower is better)
Translates to: AQPARSRLIVQP*SINEAGSDRDT
Trigger: TGTGTCTCGATCACTGCCAGCCTCATTTATAGAGCAAGGCTGAACAATTAACCTGCTTCTGGCTGGCTGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493997.1
CDS CCA 72 bp TTTTTGGTGATATTGTTCTTCTGCAGTTTCTCAGGCTaGGGAGCTGCTCGGCTAACGGGTGGTCTTTCTTCC +
Preference number: 6 (lower is better)
Translates to: FLVILFFCSFSG*GAARLTGGLSS
Trigger: GGAAGAAAGACCACCCGTTAGCCGAGCAGCTCCCCAGCCTGAGAAACTGCAGAAGAACAATATCACCAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000356458.7
ENST00000673695.1
CDS CCA 72 bp GCAGTCATCAGAAAAGCTTCCCTTTTTCTCCGAAGATaGTCAGTTGGAGTCCTCATGCCTCCATCTGCTGCT +
Preference number: 6 (lower is better)
Translates to: AVIRKASLFLRR*SVGVLMPPSAA
Trigger: AGCAGCAGATGGAGGCATGAGGACTCCAACTGACCATCTTCGGAGAAAAAGGGAAGCTTTTCTGATGACTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493997.1
CDS TCA 72 bp GGAAATATCAAAAATCCTGTCAGAATGGCCGGTGGCTaGCGCCAGAAGTTTTCCCTTCCTCCAGTCCCAAAT +
Preference number: 6 (lower is better)
Translates to: GNIKNPVRMAGG*RQKFSLPPVPN
Trigger: ATTTGGGACTGGAGGAAGGGAAAACTTCTGGCGTCAGCCACCGGCCATTCTGACAGGATTTTTGATATTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS TCA 72 bp TCATTAATGCAGAGAAGAACGAGCAGGGAGGTACACTaGCAACACGCCTCGGCAACAAATTGTATTGCTGGG +
Preference number: 6 (lower is better)
Translates to: SLMQRRTSREVH*QHASATNCIAG
Trigger: CCCAGCAATACAATTTGTTGCCGAGGCGTGTTGTCAGTGTACCTCCCTGCTCGTTCTTCTCTGCATTAATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493997.1
CDS GCA 72 bp CCGAAGATGGTCAGTTGGAGTCCTCATGCCTCCATCTaGTGCTCCTCCAGGTCTCTAGCAATTTATAAATCT +
Preference number: 6 (lower is better)
Translates to: PKMVSWSPHASI*CSSRSLAIYKS
Trigger: AGATTTATAAATTGCTAGAGACCTGGAGGAGCAGCAGATGGAGGCATGAGGACTCCAACTGACCATCTTCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493997.1
CDS CCA 72 bp TCTGGGCAACAGCATAGACATCTACTGGGCCATCATTaGATCCCACTGCAAGGTAAGAACCATCTGGAGAAA +
Preference number: 6 (lower is better)
Translates to: SGQQHRHLLGHH*IPLQGKNHLEK
Trigger: TTTCTCCAGATGGTTCTTACCTTGCAGTGGGATCCAATGATGGCCCAGTAGATGTCTATGCTGTTGCCCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS CAA 72 bp ATATGCATATATATGGCTCCTTCCCGACTTGGCCAGTaGCAACGAGAGTTTTGTCTGGGTGTAAGGCAAGGC +
Preference number: 6 (lower is better)
Translates to: ICIYMAPSRLGQ*QREFCLGVRQG
Trigger: GCCTTGCCTTACACCCAGACAAAACTCTCGTTGCAACTGGCCAAGTCGGGAAGGAGCCATATATATGCATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS CAA 90 bp AGGAATCCCATATGCATATATATGGCTCCTTCCCGACTTGGCCAGTaGCAACGAGAGTTTTGTCTGGGTGTAAGGCAAGGTGAAGTTTGC +
Preference number: 6 (lower is better)
Translates to: RNPICIYMAPSRLGQ*QREFCLGVRQGEVC
Trigger: GCAAACTTCACCTTGCCTTACACCCAGACAAAACTCTCGTTGCAACTGGCCAAGTCGGGAAGGAGCCATATATATGCATATGGGATTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491655.1
CDS CAA 90 bp ATGTCCTCTGAGGCTCCAGGGTACTTTGTGCCAAATATCTTTAGTTaGTCCTTTCACATCCCCTTTTTGCCCTTGTCCACCCTGCTCTGT +
Preference number: 6 (lower is better)
Translates to: MSSEAPGYFVPNIFS*SFHIPFLPLSTLLC
Trigger: ACAGAGCAGGGTGGACAAGGGCAAAAAGGGGATGTGAAAGGACAAACTAAAGATATTTGGCACAAAGTACCCTGGAGCCTCAGAGGACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673916.1
CDS TCA 72 bp GGAGTTTCAAGCTGTCCTCAGGAGCCTTTTCTCGTTTaGGGAAGGGCACTGCGTGGTTTTTCTCTTTACTTT +
Preference number: 6 (lower is better)
Translates to: GVSSCPQEPFLV*GRALRGFSLYF
Trigger: AAAGTAAAGAGAAAAACCACGCAGTGCCCTTCCTCAAACGAGAAAAGGCTCCTGAGGACAGCTTGAAACTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356458.7
ENST00000493997.1
ENST00000673695.1
ENST00000673912.1
CDS TCA 72 bp AGCGACAAACATTTTAGAGTTTGTGTGTCCCACACATaGATAGCAGCATCTCTTCCAACCTGCCCAGTAGCC +
Preference number: 6 (lower is better)
Translates to: SDKHFRVCVSHT*IAASLPTCPVA
Trigger: GGCTACTGGGCAGGTTGGAAGAGATGCTGCTATTCATGTGTGGGACACACAAACTCTAAAATGTTTGTCGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356458.7
ENST00000493997.1
ENST00000673695.1
ENST00000673912.1
CDS CCA 72 bp GAATCCCATATGCATATATATGGCTCCTTCCCGACTTaGCCAGTTGCAACGAGAGTTTTGTCTGGGTGTAAG +
Preference number: 6 (lower is better)
Translates to: ESHMHIYGSFPT*PVATRVLSGCK
Trigger: CTTACACCCAGACAAAACTCTCGTTGCAACTGGCCAAGTCGGGAAGGAGCCATATATATGCATATGGGATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356458.7
ENST00000491655.1
ENST00000673695.1
ENST00000673912.1
CDS CAA 72 bp TGGAGTTTCAAGCTGTCCTCAGGAGCCTTTTCTCGTTaGAGGAAGGGCACTGCGTGGTTTTTCTCTTTACTT +
Preference number: 6 (lower is better)
Translates to: WSFKLSSGAFSR*RKGTAWFFSLL
Trigger: AAGTAAAGAGAAAAACCACGCAGTGCCCTTCCTCAAACGAGAAAAGGCTCCTGAGGACAGCTTGAAACTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356458.7
ENST00000493997.1
ENST00000673695.1
ENST00000673912.1
CDS CAA 72 bp ATATGCATATATATGGCTCCTTCCCGACTTGGCCAGTaGCAACGAGAGTTTTGTCTGGGTGTAAGGCAAGGT +
Preference number: 6 (lower is better)
Translates to: ICIYMAPSRLGQ*QREFCLGVRQG
Trigger: ACCTTGCCTTACACCCAGACAAAACTCTCGTTGCAACTGGCCAAGTCGGGAAGGAGCCATATATATGCATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491655.1
CDS CAA 72 bp GAGGCTCCAGGGTACTTTGTGCCAAATATCTTTAGTTaGTCCTTTCACATCCCCTTTTTGCCCTTGTCCACC +
Preference number: 6 (lower is better)
Translates to: EAPGYFVPNIFS*SFHIPFLPLST
Trigger: GGTGGACAAGGGCAAAAAGGGGATGTGAAAGGACAAACTAAAGATATTTGGCACAAAGTACCCTGGAGCCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673916.1
CDS CCA 72 bp AGTCTGGACATTATAGGAATCCCATATGCATATATATaGCTCCTTCCCGACTTGGCCAGTTGCAACGAGAGT +
Preference number: 6 (lower is better)
Translates to: SLDIIGIPYAYI*LLPDLASCNES
Trigger: ACTCTCGTTGCAACTGGCCAAGTCGGGAAGGAGCCATATATATGCATATGGGATTCCTATAATGTCCAGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356458.7
ENST00000491655.1
ENST00000673695.1
ENST00000673912.1
CDS CCA 72 bp TTCTCCTTCCATGTGCCCCTGAACAAGCAGTGTCATTaGGCCACTCTTATCAATTTCCAGAATCTCTCCATT +
Preference number: 6 (lower is better)
Translates to: FSFHVPLNKQCH*ATLINFQNLSI
Trigger: AATGGAGAGATTCTGGAAATTGATAAGAGTGGCCCAATGACACTGCTTGTTCAGGGGCACATGGAAGGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS CAA 72 bp CCAAGCAGTAGATGTCCTCTGAGGCTCCAGGGTACTTaGTGCCAAATATCTTTAGTTTGTCCTTTCACATCC +
Preference number: 6 (lower is better)
Translates to: PSSRCPLRLQGT*CQISLVCPFTS
Trigger: GGATGTGAAAGGACAAACTAAAGATATTTGGCACAAAGTACCCTGGAGCCTCAGAGGACATCTACTGCTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673916.1
CDS CAA 90 bp TGTATGAACTGGAGTTTCAAGCTGTCCTCAGGAGCCTTTTCTCGTTaGAGGAAGGGCACTGCGTGGTTTTTCTCTTTACTTTGTTGCTTT +
Preference number: 6 (lower is better)
Translates to: CMNWSFKLSSGAFSR*RKGTAWFFSLLCCF
Trigger: AAAGCAACAAAGTAAAGAGAAAAACCACGCAGTGCCCTTCCTCAAACGAGAAAAGGCTCCTGAGGACAGCTTGAAACTCCAGTTCATACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356458.7
ENST00000493997.1
ENST00000673695.1
ENST00000673912.1
CDS CAA 90 bp ATACACGACAGCAACTGCAGCAATGTGGTAGACTACTTCTCCAGCTaGTGTGTAGAACAGATTGTTTCTACAGTCGTAGCCTCTATAACC +
Preference number: 6 (lower is better)
Translates to: IHDSNCSNVVDYFSS*CVEQIVSTVVASIT
Trigger: GGTTATAGAGGCTACGACTGTAGAAACAATCTGTTCTACACACAAGCTGGAGAAGTAGTCTACCACATTGCTGCAGTTGCTGTCGTGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS CAA 90 bp GAAGCATTTCCAAGCAGTAGATGTCCTCTGAGGCTCCAGGGTACTTaGTGCCAAATATCTTTAGTTTGTCCTTTCACATCCCCTTTTTGC +
Preference number: 6 (lower is better)
Translates to: EAFPSSRCPLRLQGT*CQISLVCPFTSPFC
Trigger: GCAAAAAGGGGATGTGAAAGGACAAACTAAAGATATTTGGCACAAAGTACCCTGGAGCCTCAGAGGACATCTACTGCTTGGAAATGCTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673916.1
CDS TCA 72 bp ATAACTGAAGCACAGGTCCAAGAAATGCATAGTGGTTaGACAAACAGCAAATGCATGGAGCAGGAGGTGTCA +
Preference number: 6 (lower is better)
Translates to: ITEAQVQEMHSG*TNSKCMEQEVS
Trigger: TGACACCTCCTGCTCCATGCATTTGCTGTTTGTTCAACCACTATGCATTTCTTGGACCTGTGCTTCAGTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493997.1
CDS CCA 72 bp TCTGAGTCAAAAGCCAGGCAGGCAACTCCATGTGTATaGACATCTTTAAGAAGAGACACAGTCTGGACATTA +
Preference number: 6 (lower is better)
Translates to: SESKARQATPCV*TSLRRDTVWTL
Trigger: TAATGTCCAGACTGTGTCTCTTCTTAAAGATGTCCATACACATGGAGTTGCCTGCCTGGCTTTTGACTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000356458.7
ENST00000491655.1
ENST00000673695.1
ENST00000673912.1
CDS CAA 72 bp CCAAAATCATCTCCGGTGGCTAAAAGGGAACAGTCTTaGGTAAGACTGGCAGCATTTACGTCAGTTATATCG +
Preference number: 6 (lower is better)
Translates to: PKSSPVAKREQS*VRLAAFTSVIS
Trigger: CGATATAACTGACGTAAATGCTGCCAGTCTTACCAAAGACTGTTCCCTTTTAGCCACCGGAGATGATTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS CAA 72 bp AAATGTTCTCCTGGGCAATTCTGCAGGTATCCTGTTTaGGGAATGTGTCATAAGGCTTGGGAGCAATTCCAA +
Preference number: 6 (lower is better)
Translates to: KCSPGQFCRYPV*GMCHKAWEQFQ
Trigger: TTGGAATTGCTCCCAAGCCTTATGACACATTCCCAAAACAGGATACCTGCAGAATTGCCCAGGAGAACATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493997.1
CDS CAA 90 bp ATACACGACAGCAACTGCAGCAATGTGGTAGACTACTTCTCCAGCTaGTGTGTAGAACAGATTGTTTCTACAGTCGTAGCCTCTATAACT +
Preference number: 6 (lower is better)
Translates to: IHDSNCSNVVDYFSS*CVEQIVSTVVASIT
Trigger: AGTTATAGAGGCTACGACTGTAGAAACAATCTGTTCTACACACAAGCTGGAGAAGTAGTCTACCACATTGCTGCAGTTGCTGTCGTGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493997.1
CDS TCA 72 bp CCATCGGCTGAAAAATCAAGTGCACACACTCCTCTCTaGTGTTGTCCTTTCAACAGCGACAAACATTTTAGA +
Preference number: 6 (lower is better)
Translates to: PSAEKSSAHTPL*CCPFNSDKHFR
Trigger: TCTAAAATGTTTGTCGCTGTTGAAAGGACAACATCAGAGAGGAGTGTGTGCACTTGATTTTTCAGCCGATGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000356458.7
ENST00000493997.1
ENST00000673695.1
ENST00000673912.1
CDS CAA 72 bp ACCACTTGGGCAGGCAGATTTATGAGCTGTCATTTGTaGCCAAGAATTCAATCTCAACAGCAGTCATCAGAA +
Preference number: 6 (lower is better)
Translates to: TTWAGRFMSCHL*PRIQSQQQSSE
Trigger: TTCTGATGACTGCTGTTGAGATTGAATTCTTGGCAACAAATGACAGCTCATAAATCTGCCTGCCCAAGTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493997.1
CDS CAA 90 bp TTAACGAAACCAAAATCATCTCCGGTGGCTAAAAGGGAACAGTCTTaGGTAAGACTGGCAGCATTTACGTCAGTTATATCGCTATGTGCT +
Preference number: 6 (lower is better)
Translates to: LTKPKSSPVAKREQS*VRLAAFTSVISLCA
Trigger: AGCACATAGCGATATAACTGACGTAAATGCTGCCAGTCTTACCAAAGACTGTTCCCTTTTAGCCACCGGAGATGATTTTGGTTTCGTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS CAA 90 bp AGAAGAAAAACCACTTGGGCAGGCAGATTTATGAGCTGTCATTTGTaGCCAAGAATTCAATCTCAACAGCAGTCATCAGAAAAGCTTCCC +
Preference number: 6 (lower is better)
Translates to: RRKTTWAGRFMSCHL*PRIQSQQQSSEKLP
Trigger: GGGAAGCTTTTCTGATGACTGCTGTTGAGATTGAATTCTTGGCAACAAATGACAGCTCATAAATCTGCCTGCCCAAGTGGTTTTTCTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493997.1
CDS CAA 72 bp TTTGTAAACCTGGCGATCATAATTGATTTGAGCTTCTaGCTCAATATCAGAGTCCAGTTCGGGCACATCAGA +
Preference number: 6 (lower is better)
Translates to: FVNLAIIIDLSF*LNIRVQFGHIR
Trigger: TCTGATGTGCCCGAACTGGACTCTGATATTGAGCAAGAAGCTCAAATCAATTATGATCGCCAGGTTTACAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000356458.7
ENST00000493997.1
ENST00000673695.1
ENST00000673912.1
CDS CAA 90 bp ACCAGAAGAAAAACCACTTGGGCAGGCAGATTTATGAGCTGTCATTaGTTGCCAAGAATTCAATCTCAACAGCAGTCATCAGAAAAGCTT +
Preference number: 6 (lower is better)
Translates to: TRRKTTWAGRFMSCH*LPRIQSQQQSSEKL
Trigger: AAGCTTTTCTGATGACTGCTGTTGAGATTGAATTCTTGGCAACAAATGACAGCTCATAAATCTGCCTGCCCAAGTGGTTTTTCTTCTGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493997.1
CDS CAA 90 bp AACTTTCAGATTAGCCTGGGAAGTGTTCTTGTTGATAATTCTTTTTaGTCCAAGATCCCTCCTATTCATTGTTCCCCTAGTCACACTACC +
Preference number: 6 (lower is better)
Translates to: NFQISLGSVLVDNSF*SKIPPIHCSPSHTT
Trigger: GGTAGTGTGACTAGGGGAACAATGAATAGGAGGGATCTTGGACAAAAAAGAATTATCAACAAGAACACTTCCCAGGCTAATCTGAAAGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493997.1
CDS TCA 72 bp CAGATGTACCTGATTAATCATTGCATTATTCTGCCCTaGTTGACAGTGATGTTACACCCTGTAACTACTTCT +
Preference number: 6 (lower is better)
Translates to: QMYLINHCIILP*LTVMLHPVTTS
Trigger: AGAAGTAGTTACAGGGTGTAACATCACTGTCAATCAGGGCAGAATAATGCAATGATTAATCAGGTACATCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493997.1
CDS CAA 72 bp ATTAGCCTGGGAAGTGTTCTTGTTGATAATTCTTTTTaGTCCAAGATCCCTCCTATTCATTGTTCCCCTAGT +
Preference number: 6 (lower is better)
Translates to: ISLGSVLVDNSF*SKIPPIHCSPS
Trigger: ACTAGGGGAACAATGAATAGGAGGGATCTTGGACAAAAAAGAATTATCAACAAGAACACTTCCCAGGCTAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493997.1
CDS CAA 90 bp AATGACTGGCTAAGGAATCCTGCAAATCAAGTGATTTCCAATTCTTaGCTTTCAACAAAATTGTACAGAGACTTAATGGAATTACCAGCT +
Preference number: 6 (lower is better)
Translates to: NDWLRNPANQVISNS*LSTKLYRDLMELPA
Trigger: AGCTGGTAATTCCATTAAGTCTCTGTACAATTTTGTTGAAAGCAAAGAATTGGAAATCACTTGATTTGCAGGATTCCTTAGCCAGTCATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493997.1
CDS TCA 72 bp ATGGCATTTAGGTTCCTTTGCATCCATTTAAAGGACTaGTGTATTCATAATACAGATAGTATCTTCTCAGCC +
Preference number: 6 (lower is better)
Translates to: MAFRFLCIHLKD*CIHNTDSIFSA
Trigger: GGCTGAGAAGATACTATCTGTATTATGAATACATCAGTCCTTTAAATGGATGCAAAGGAACCTAAATGCCAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493997.1
CDS CCA 72 bp ATGTGTTTTATCCCAACTGTAACCAGTTTGTCAACATaGTGTGGGTTACACTTTACCACAAATATCTTATCT +
Preference number: 6 (lower is better)
Translates to: MCFIPTVTSLST*CGLHFTTNILS
Trigger: AGATAAGATATTTGTGGTAAAGTGTAACCCACACCATGTTGACAAACTGGTTACAGTTGGGATAAAACACAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356458.7
ENST00000673695.1
ENST00000673912.1
CDS CCA 72 bp CAAGTATGCATGTTGAAAGAAAACAACTCTAATGACTaGCTAAGGAATCCTGCAAATCAAGTGATTTCCAAT +
Preference number: 6 (lower is better)
Translates to: QVCMLKENNSND*LRNPANQVISN
Trigger: ATTGGAAATCACTTGATTTGCAGGATTCCTTAGCCAGTCATTAGAGTTGTTTTCTTTCAACATGCATACTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493997.1