RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EML4 (Homo sapiens)

Ensembl gene IDs: ENSG00000143924

Ensembl transcript IDs: ENST00000318522.10, ENST00000401738.3, ENST00000402711.6, ENST00000406175.3, ENST00000409040.1, ENST00000472632.1, ENST00000480320.1, ENST00000482660.1

Found 426 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ATCATGATTATAAATCTCATTGTACATGGCAACCCCAAAGGTGACTaGTGTCCTCAAATAAACTCCCTGCTGATCACTGAGAGCTGTATT +
Preference number: 1 (lower is better)
Translates to: IMIINLIVHGNPKGD*CPQINSLLITESCI
Trigger: AATACAGCTCTCAGTGATCAGCAGGGAGTTTATTTGAGGACATCAGTCACCTTTGGGGTTGCCATGTACAATGAGATTTATAATCATGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318522.10
3UTR TCA 90 bp GCCTGTTCATGTCAGTATATTTCTTGCAGGGAGTATAGCACATGCTaGTCTGATGATGTAATAATCATTGCTAACAGACAGATATATATG +
Preference number: 1 (lower is better)
Translates to: ACSCQYISCREYSTC*SDDVIIIANRQIYM
Trigger: CATATATATCTGTCTGTTAGCAATGATTATTACATCATCAGATCAGCATGTGCTATACTCCCTGCAAGAAATATACTGACATGAACAGGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318522.10
3UTR CCA 90 bp ACACCCTTCCATACAGCGTGTGAATATAAATGTTGTAAATGTCCTTaGGAGTTCACTGGAGTTTTCATATTACCAAATGATGATGAAATA +
Preference number: 1 (lower is better)
Translates to: TPFHTACEYKCCKCP*EFTGVFILPNDDEI
Trigger: TATTTCATCATCATTTGGTAATATGAAAACTCCAGTGAACTCCCAAGGACATTTACAACATTTATATTCACACGCTGTATGGAAGGGTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318522.10
3UTR-3UTR TCA 90 bp AGCTGGAACGCTTCCTGCGTATTAGTAGTGTCTTTTGAAACTACCACCGAAGAGGACTGTTCCTCATTATaGCTTAGAAAAGGCAGCACC +
Preference number: 2 (lower is better)
Translates to: SWNASCVLVVSFETTTEEDCSSL*LRKGST
Trigger: GGTGCTGCCTTTTCTAAGTCATAATGAGGAACAGTC...CTCTTCGGTGGTAGTTTCAAAAGACACTACTAATACGCAGGAAGCGTTCCAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318522.10
3UTR-3UTR TCA 90 bp CTCTTTCTTCTCCAAGAACTGCCTGTTCATGTCAGTATATTTCTTGCAGGGAGTATTACACATTTGGGGTaGGAGGGTATCTCAGTAAGA +
Preference number: 2 (lower is better)
Translates to: LFLLQELPVHVSIFLAGSITHLG*EGISVR
Trigger: TCTTACTGAGATACCCTCTCACCCCAAATGTGTAAT...ACTCCCTGCAAGAAATATACTGACATGAACAGGCAGTTCTTGGAGAAGAAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318522.10
3UTR-3UTR GCA 90 bp GCAACTGCTGTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTAGTGATTCTCCATCACTaGCCATCCTGTTACCTGAAC +
Preference number: 2 (lower is better)
Translates to: ATAVFVSSIYITPLRYTVVILHH*PSCYLN
Trigger: GTTCAGGTAACAGGATGGGCAGTGATGGAGAATCAC...TACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAACAGCAGTTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
3UTR-3UTR GCA 90 bp CTCTTTCTTCTCCAAGAACTGCCTGTTCATGTCAGTATATTTCTTGCAGGGAGTCCAATGCATAATACATaGATTGCCCAAAAGAGTAGG +
Preference number: 2 (lower is better)
Translates to: LFLLQELPVHVSIFLAGSPMHNT*IAQKSR
Trigger: CCTACTCTTTTGGGCAATGCATGTATTATGCATTGG...ACTCCCTGCAAGAAATATACTGACATGAACAGGCAGTTCTTGGAGAAGAAAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318522.10
3UTR-3UTR TCA 90 bp GCAACTGCTGTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTAAATCTCAATCAACAGTaGTTCTCCATCACTGCCCAT +
Preference number: 2 (lower is better)
Translates to: ATAVFVSSIYITPLRYTVNLNQQ*FSITAH
Trigger: ATGGGCAGTGATGGAGAATCACTGTTGATTGAGATT...TACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAACAGCAGTTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
3UTR-3UTR GCA 90 bp CCTGCATACTTAAGACTTCTTAACTCATCCAAAGTTTCTAAACATGATTTGACCGTGATTCTCCATCACTaGCCATCCTGTTACCTGAAC +
Preference number: 2 (lower is better)
Translates to: PAYLRLLNSSKVSKHDLTVILHH*PSCYLN
Trigger: GTTCAGGTAACAGGATGGGCAGTGATGGAGAATCAC...GGTCAAATCATGTTTAGAAACTTTGGATGAGTTAAGAAGTCTTAAGTATGCAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318522.10
3UTR-3UTR CCA 90 bp TGCCATGAGACAGGAATGCATGATAGCAATGGCTCAACATCTTCACATGAAACATCCTTGGGAGTTCACTaGAGTTTTCATATTACCAAA +
Preference number: 2 (lower is better)
Translates to: CHETGMHDSNGSTSSHETSLGVH*SFHITK
Trigger: TTTGGTAATATGAAAACTCCAGTGAACTCCCAAGGA...TGTTTCATGTGAAGATGTTGAGCCATTGCTATCATGCATTCCTGTCTCATGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318522.10
3UTR CAA 90 bp TTAAAGGCATGTGGTTTTCCTTCCATTCACTTGAATCTCAAACATTaGAGAATGTTTAGGCTAGTAAAGGACTCCTTGGAGGAATCCATC +
Preference number: 2 (lower is better)
Translates to: LKACGFPSIHLNLKH*RMFRLVKDSLEESI
Trigger: GATGGATTCCTCCAAGGAGTCCTTTACTAGCCTAAACATTCTCAAATGTTTGAGATTCAAGTGAATGGAAGGAAAACCACATGCCTTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318522.10
3UTR-3UTR TCA 90 bp AAAAATACCTTTCCAATGCATAATACATGCATTGCCCAAAAGAGTAGGATAGCCAATCTCAATCAACAGTaGTTCTCCATCACTGCCCAT +
Preference number: 2 (lower is better)
Translates to: KNTFPMHNTCIAQKSRIANLNQQ*FSITAH
Trigger: ATGGGCAGTGATGGAGAATCACTGTTGATTGAGATT...GGCTATCCTACTCTTTTGGGCAATGCATGTATTATGCATTGGAAAGGTATTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318522.10
3UTR-3UTR GCA 90 bp TGCCATGAGACAGGAATGCATGATAGCAATGGCTCAACATCTTCACATGAAACAAGGTACTTAAAGAAATaGTCTTTCTTCTCCAAGAAC +
Preference number: 2 (lower is better)
Translates to: CHETGMHDSNGSTSSHETRYLKK*SFFSKN
Trigger: GTTCTTGGAGAAGAAAGAGCATTTCTTTAAGTACCT...TGTTTCATGTGAAGATGTTGAGCCATTGCTATCATGCATTCCTGTCTCATGGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318522.10
3UTR-3UTR CCA 90 bp CTCTTTCTTCTCCAAGAACTGCCTGTTCATGTCAGTATATTTCTTGCAGGGAGTAGTTTTAAAGGCATGTaGTTTTCCTTCCATTCACTT +
Preference number: 2 (lower is better)
Translates to: LFLLQELPVHVSIFLAGSSFKGM*FSFHSL
Trigger: AAGTGAATGGAAGGAAAACCACATGCCTTTAAAACT...ACTCCCTGCAAGAAATATACTGACATGAACAGGCAGTTCTTGGAGAAGAAAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318522.10
3UTR-3UTR CCA 90 bp GATAGCAATGGCTCAACATCTTCACATGAAACACTTGGATTCATTTTCATTCACCCAGCATTAAATAGCTaGAACGCTTCCTGCGTATTA +
Preference number: 2 (lower is better)
Translates to: DSNGSTSSHETLGFIFIHPALNS*NASCVL
Trigger: TAATACGCAGGAAGCGTTCCAGCTATTTAATGCTGG...GTGAATGAAAATGAATCCAAGTGTTTCATGTGAAGATGTTGAGCCATTGCTATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318522.10
3UTR-3UTR TCA 90 bp CCTGCATACTTAAGACTTCTTAACTCATCCAAAGTTTCTAAACATGATTTGACCGCCCATCCTGTTACCTaGACTTTATCACAAAATCAC +
Preference number: 2 (lower is better)
Translates to: PAYLRLLNSSKVSKHDLTAHPVT*TLSQNH
Trigger: GTGATTTTGTGATAAAGTTCAGGTAACAGGATGGGC...GGTCAAATCATGTTTAGAAACTTTGGATGAGTTAAGAAGTCTTAAGTATGCAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318522.10
3UTR-3UTR TCA 90 bp GTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTAATTTGTGAGGCCCATCCTGTTACCTaGACTTTATCACAAAATCAC +
Preference number: 2 (lower is better)
Translates to: VFVSSIYITPLRYTVICEAHPVT*TLSQNH
Trigger: GTGATTTTGTGATAAAGTTCAGGTAACAGGATGGGC...CTCACAAATTACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
3UTR CAA 90 bp GCTCCGATAAGTATGTACAGAACATACATACTGAAGAAAGATGGGTaGCTTGGAATCTCTCTTCTTTTGAAGAGAACTATTTTGAGGTTT +
Preference number: 2 (lower is better)
Translates to: APISMYRTYILKKDG*LGISLLLKRTILRF
Trigger: AAACCTCAAAATAGTTCTCTTCAAAAGAAGAGAGATTCCAAGCAACCCATCTTTCTTCAGTATGTATGTTCTGTACATACTTATCGGAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318522.10
3UTR-3UTR TCA 90 bp TTAATCTTCAAAATTTTCTGCCATGAGACAGGAATGCATGATAGCAATGGCTCAGAGTATAGCACATGCTaGTCTGATGATGTAATAATC +
Preference number: 2 (lower is better)
Translates to: LIFKIFCHETGMHDSNGSEYSTC*SDDVII
Trigger: GATTATTACATCATCAGATCAGCATGTGCTATACTC...TGAGCCATTGCTATCATGCATTCCTGTCTCATGGCAGAAAATTTTGAAGATTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318522.10
3UTR TCA 72 bp ATAAATCTCATTGTACATGGCAACCCCAAAGGTGACTaGTGTCCTCAAATAAACTCCCTGCTGATCACTGAG +
Preference number: 3 (lower is better)
Translates to: INLIVHGNPKGD*CPQINSLLITE
Trigger: CTCAGTGATCAGCAGGGAGTTTATTTGAGGACATCAGTCACCTTTGGGGTTGCCATGTACAATGAGATTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318522.10
3UTR-3UTR CAA 90 bp CTCTTTCTTCTCCAAGAACTGCCTGTTCATGTCAGTATATTTCTTGCAGGGAGTGCAACACCATTGCACTaGGCAAAACTGAAGTTTTTC +
Preference number: 3 (lower is better)
Translates to: LFLLQELPVHVSIFLAGSATPLH*AKLKFF
Trigger: GAAAAACTTCAGTTTTGCCAAGTGCAATGGTGTTGC...ACTCCCTGCAAGAAATATACTGACATGAACAGGCAGTTCTTGGAGAAGAAAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318522.10
3UTR TCA 72 bp GATTATAAATCTCATTGTACATGGCAACCCCAAAGGTaGCTGATGTCCTCAAATAAACTCCCTGCTGATCAC +
Preference number: 3 (lower is better)
Translates to: DYKSHCTWQPQR*LMSSNKLPADH
Trigger: GTGATCAGCAGGGAGTTTATTTGAGGACATCAGTCACCTTTGGGGTTGCCATGTACAATGAGATTTATAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318522.10
3UTR-3UTR CAA 90 bp GATAGCAATGGCTCAACATCTTCACATGAAACACTTGGATTCATTTTCATTCACAAGAAGGCAACACCATaGCACTTGGCAAAACTGAAG +
Preference number: 3 (lower is better)
Translates to: DSNGSTSSHETLGFIFIHKKATP*HLAKLK
Trigger: CTTCAGTTTTGCCAAGTGCAATGGTGTTGCCTTCTT...GTGAATGAAAATGAATCCAAGTGTTTCATGTGAAGATGTTGAGCCATTGCTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318522.10
3UTR CCA 72 bp ATTGCTAACAGACAGATATATATGCCTGATACTTACTaGCGCGCTCCGATAAGTATGTACAGAACATACATA +
Preference number: 3 (lower is better)
Translates to: IANRQIYMPDTY*RAPISMYRTYI
Trigger: TATGTATGTTCTGTACATACTTATCGGAGCGCGCCAGTAAGTATCAGGCATATATATCTGTCTGTTAGCAAT
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318522.10
3UTR TCA 72 bp TGTCAGTATATTTCTTGCAGGGAGTATAGCACATGCTaGTCTGATGATGTAATAATCATTGCTAACAGACAG +
Preference number: 3 (lower is better)
Translates to: CQYISCREYSTC*SDDVIIIANRQ
Trigger: CTGTCTGTTAGCAATGATTATTACATCATCAGATCAGCATGTGCTATACTCCCTGCAAGAAATATACTGACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318522.10
3UTR CCA 72 bp CATACAGCGTGTGAATATAAATGTTGTAAATGTCCTTaGGAGTTCACTGGAGTTTTCATATTACCAAATGAT +
Preference number: 3 (lower is better)
Translates to: HTACEYKCCKCP*EFTGVFILPND
Trigger: ATCATTTGGTAATATGAAAACTCCAGTGAACTCCCAAGGACATTTACAACATTTATATTCACACGCTGTATG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318522.10
CDS-3UTR TCA 90 bp ACAGTGATTCTCCATCACTGCCCATCCTGTTACCTGAACTTTATCACAAAATCAACTTCCCCGTCACGTTaGGAGCCGCGCCGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: TVILHHCPSCYLNFITKSTSPSR*EPRRSA
Trigger: GGCTGAGCGGCGCGGCTCTCAACGTGACGGGGAAGT...TGATTTTGTGATAAAGTTCAGGTAACAGGATGGGCAGTGATGGAGAATCACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318522.10
ENST00000402711.6
CDS-3UTR GCA 90 bp GCTAACAGACAGATATATATGCCTGATACTTACTGGCGCGCTCCGATAAGTATGCGAAACCGTCCATCTTaGGGGGAAAGCGCCGGGCTC +
Preference number: 4 (lower is better)
Translates to: ANRQIYMPDTYWRAPISMRNRPS*GESAGL
Trigger: GAGCCCGGCGCTTTCCCCGCAAGATGGACGGTTTCG...CATACTTATCGGAGCGCGCCAGTAAGTATCAGGCATATATATCTGTCTGTTAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318522.10
CDS-3UTR GCA 90 bp AGCTGGAACGCTTCCTGCGTATTAGTAGTGTCTTTTGAAACTACCACCGAAGAGCACCAAGGTCTCCGCTaGCCTCTTCACTCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: SWNASCVLVVSFETTTEEHQGLR*PLHSPP
Trigger: AGGAGGAGAGTGAAGAGGGCAGCGGAGACCTTGGTG...CTCTTCGGTGGTAGTTTCAAAAGACACTACTAATACGCAGGAAGCGTTCCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318522.10
CDS-3UTR CCA 90 bp GCAACTGCTGTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTATCCGTCCGTTCGCCCTaGGGTAGTAAGCCGCGGCCG +
Preference number: 4 (lower is better)
Translates to: ATAVFVSSIYITPLRYTVSVRSP*GSKPRP
Trigger: CGGCCGCGGCTTACTACCCCAGGGCGAACGGACGGA...TACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAACAGCAGTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318522.10
ENST00000402711.6
CDS-3UTR TCA 90 bp GCTAACAGACAGATATATATGCCTGATACTTACTGGCGCGCTCCGATAAGTATGCAGAATCCCACACTCTaGCGTGGGGTTGTAGAGGCC +
Preference number: 4 (lower is better)
Translates to: ANRQIYMPDTYWRAPISMQNPTL*RGVVEA
Trigger: GGCCTCTACAACCCCACGTCAGAGTGTGGGATTCTG...CATACTTATCGGAGCGCGCCAGTAAGTATCAGGCATATATATCTGTCTGTTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318522.10
CDS-3UTR CCA 90 bp AGCTGGAACGCTTCCTGCGTATTAGTAGTGTCTTTTGAAACTACCACCGAAGAGCTGAGTGCGTTCCTATaGCCACCACTGTGCCACTTG +
Preference number: 4 (lower is better)
Translates to: SWNASCVLVVSFETTTEELSAFL*PPLCHL
Trigger: CAAGTGGCACAGTGGTGGCCATAGGAACGCACTCAG...CTCTTCGGTGGTAGTTTCAAAAGACACTACTAATACGCAGGAAGCGTTCCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318522.10
CDS-3UTR TCA 90 bp GCTAACAGACAGATATATATGCCTGATACTTACTGGCGCGCTCCGATAAGTATGAACAAACCACCTGCCTaGGTGCGTTCCTATGGCCAC +
Preference number: 4 (lower is better)
Translates to: ANRQIYMPDTYWRAPISMNKPPA*VRSYGH
Trigger: GTGGCCATAGGAACGCACTCAGGCAGGTGGTTTGTT...CATACTTATCGGAGCGCGCCAGTAAGTATCAGGCATATATATCTGTCTGTTAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318522.10
CDS-3UTR GCA 90 bp GCAACTGCTGTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTACGAAACCGTCCATCTTaGGGGGAAAGCGCCGGGCTC +
Preference number: 4 (lower is better)
Translates to: ATAVFVSSIYITPLRYTVRNRPS*GESAGL
Trigger: GAGCCCGGCGCTTTCCCCGCAAGATGGACGGTTTCG...TACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAACAGCAGTTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR GCA 90 bp ACAGTGATTCTCCATCACTGCCCATCCTGTTACCTGAACTTTATCACAAAATCAGAGGGCGAAGGGTCTTaGTGGTCCTCCAGAAGGGTG +
Preference number: 4 (lower is better)
Translates to: TVILHHCPSCYLNFITKSEGEGS*WSSRRV
Trigger: CACCCTTCTGGAGGACCAGCAAGACCCTTCGCCCTC...TGATTTTGTGATAAAGTTCAGGTAACAGGATGGGCAGTGATGGAGAATCACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR CCA 90 bp ACAGTGATTCTCCATCACTGCCCATCCTGTTACCTGAACTTTATCACAAAATCAGGCGAAGGGTCTTGCTaGTCCTCCAGAAGGGTGGCT +
Preference number: 4 (lower is better)
Translates to: TVILHHCPSCYLNFITKSGEGSC*SSRRVA
Trigger: AGCCACCCTTCTGGAGGACCAGCAAGACCCTTCGCC...TGATTTTGTGATAAAGTTCAGGTAACAGGATGGGCAGTGATGGAGAATCACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR TCA 90 bp TGCCATGAGACAGGAATGCATGATAGCAATGGCTCAACATCTTCACATGAAACAGGGCTGGGGAGAAGGTaGTGCTCGAATTTGTGGACT +
Preference number: 4 (lower is better)
Translates to: CHETGMHDSNGSTSSHETGLGRR*CSNLWT
Trigger: AGTCCACAAATTCGAGCATCACCTTCTCCCCAGCCC...TGTTTCATGTGAAGATGTTGAGCCATTGCTATCATGCATTCCTGTCTCATGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318522.10
CDS-3UTR TCA 90 bp ACAGTGATTCTCCATCACTGCCCATCCTGTTACCTGAACTTTATCACAAAATCACAGAATCCCACACTCTaGCGTGGGGTTGTAGAGGCC +
Preference number: 4 (lower is better)
Translates to: TVILHHCPSCYLNFITKSQNPTL*RGVVEA
Trigger: GGCCTCTACAACCCCACGTCAGAGTGTGGGATTCTG...TGATTTTGTGATAAAGTTCAGGTAACAGGATGGGCAGTGATGGAGAATCACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR TCA 90 bp GCTAACAGACAGATATATATGCCTGATACTTACTGGCGCGCTCCGATAAGTATGCACACCTGCCTGTCCTaGGCACATGTCAAGAGCAAA +
Preference number: 4 (lower is better)
Translates to: ANRQIYMPDTYWRAPISMHTCLS*AHVKSK
Trigger: TTTGCTCTTGACATGTGCTCAGGACAGGCAGGTGTG...CATACTTATCGGAGCGCGCCAGTAAGTATCAGGCATATATATCTGTCTGTTAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318522.10
CDS-3UTR TCA 90 bp CTCTTTCTTCTCCAAGAACTGCCTGTTCATGTCAGTATATTTCTTGCAGGGAGTCTCCCTGCTGATCACTaGGAGCTGTATTCCCCAGGT +
Preference number: 4 (lower is better)
Translates to: LFLLQELPVHVSIFLAGSLPADH*ELYSPG
Trigger: ACCTGGGGAATACAGCTCTCAGTGATCAGCAGGGAG...ACTCCCTGCAAGAAATATACTGACATGAACAGGCAGTTCTTGGAGAAGAAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318522.10
CDS-3UTR GCA 90 bp CCTCAAATAAACTCCCTGCTGATCACTGAGAGCTGTATTCCCCAGGTACTTAAACCAGAACAAACCACCTaGCTGAGTGCGTTCCTATGG +
Preference number: 4 (lower is better)
Translates to: PQINSLLITESCIPQVLKPEQTT*LSAFLW
Trigger: CCATAGGAACGCACTCAGGCAGGTGGTTTGTTCTGG...TTTAAGTACCTGGGGAATACAGCTCTCAGTGATCAGCAGGGAGTTTATTTGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318522.10
CDS-3UTR GCA 90 bp ACAGTGATTCTCCATCACTGCCCATCCTGTTACCTGAACTTTATCACAAAATCACACCAAGGTCTCCGCTaGCCTCTTCACTCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: TVILHHCPSCYLNFITKSHQGLR*PLHSPP
Trigger: AGGAGGAGAGTGAAGAGGGCAGCGGAGACCTTGGTG...TGATTTTGTGATAAAGTTCAGGTAACAGGATGGGCAGTGATGGAGAATCACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR GCA 90 bp AGCTGGAACGCTTCCTGCGTATTAGTAGTGTCTTTTGAAACTACCACCGAAGAGCTTTGGCCTGCTCCTTaGTTATCTCGTTGCATGGCT +
Preference number: 4 (lower is better)
Translates to: SWNASCVLVVSFETTTEELWPAP*LSRCMA
Trigger: AGCCATGCAACGAGATAAGCAAGGAGCAGGCCAAAG...CTCTTCGGTGGTAGTTTCAAAAGACACTACTAATACGCAGGAAGCGTTCCAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318522.10
CDS-3UTR GCA 90 bp CCTCAAATAAACTCCCTGCTGATCACTGAGAGCTGTATTCCCCAGGTACTTAAAAGGGTGGCTTTGGCCTaGTCCTTGCTTATCTCGTTG +
Preference number: 4 (lower is better)
Translates to: PQINSLLITESCIPQVLKRVALA*SLLISL
Trigger: CAACGAGATAAGCAAGGAGCAGGCCAAAGCCACCCT...TTTAAGTACCTGGGGAATACAGCTCTCAGTGATCAGCAGGGAGTTTATTTGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318522.10
CDS-3UTR CCA 90 bp CCTGCATACTTAAGACTTCTTAACTCATCCAAAGTTTCTAAACATGATTTGACCAGCGGACCGACAGAGTaGCCGACGCTGAGCCTGACC +
Preference number: 4 (lower is better)
Translates to: PAYLRLLNSSKVSKHDLTSGPTE*PTLSLT
Trigger: GGTCAGGCTCAGCGTCGGCCACTCTGTCGGTCCGCT...GGTCAAATCATGTTTAGAAACTTTGGATGAGTTAAGAAGTCTTAAGTATGCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318522.10
CDS-3UTR CCA 90 bp GTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTAATTTGTGAGAGCGGACCGACAGAGTaGCCGACGCTGAGCCTGACC +
Preference number: 4 (lower is better)
Translates to: VFVSSIYITPLRYTVICESGPTE*PTLSLT
Trigger: GGTCAGGCTCAGCGTCGGCCACTCTGTCGGTCCGCT...CTCACAAATTACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR CCA 90 bp AGCTGGAACGCTTCCTGCGTATTAGTAGTGTCTTTTGAAACTACCACCGAAGAGATCTGCACAGTGTCCTaGTTCATCTACCAGCCTGGT +
Preference number: 4 (lower is better)
Translates to: SWNASCVLVVSFETTTEEICTVS*FIYQPG
Trigger: ACCAGGCTGGTAGATGAACCAGGACACTGTGCAGAT...CTCTTCGGTGGTAGTTTCAAAAGACACTACTAATACGCAGGAAGCGTTCCAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318522.10
CDS-3UTR CCA 90 bp CCTCAAATAAACTCCCTGCTGATCACTGAGAGCTGTATTCCCCAGGTACTTAAACTGACATTGGTGACATaGCTGCTGTGGGCACTGTAC +
Preference number: 4 (lower is better)
Translates to: PQINSLLITESCIPQVLKLTLVT*LLWALY
Trigger: GTACAGTGCCCACAGCAGCCATGTCACCAATGTCAG...TTTAAGTACCTGGGGAATACAGCTCTCAGTGATCAGCAGGGAGTTTATTTGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318522.10
CDS-3UTR CCA 90 bp GCAACTGCTGTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTAGGCGAAGGGTCTTGCTaGTCCTCCAGAAGGGTGGCT +
Preference number: 4 (lower is better)
Translates to: ATAVFVSSIYITPLRYTVGEGSC*SSRRVA
Trigger: AGCCACCCTTCTGGAGGACCAGCAAGACCCTTCGCC...TACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAACAGCAGTTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR TCA 90 bp AGCTGGAACGCTTCCTGCGTATTAGTAGTGTCTTTTGAAACTACCACCGAAGAGGCTGACAGGCGATCTTaGACATCAGAAGTACTTGCA +
Preference number: 4 (lower is better)
Translates to: SWNASCVLVVSFETTTEEADRRS*TSEVLA
Trigger: TGCAAGTACTTCTGATGTTCAAGATCGCCTGTCAGC...CTCTTCGGTGGTAGTTTCAAAAGACACTACTAATACGCAGGAAGCGTTCCAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318522.10
CDS-3UTR TCA 90 bp GCAACTGCTGTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTACAGAATCCCACACTCTaGCGTGGGGTTGTAGAGGCC +
Preference number: 4 (lower is better)
Translates to: ATAVFVSSIYITPLRYTVQNPTL*RGVVEA
Trigger: GGCCTCTACAACCCCACGTCAGAGTGTGGGATTCTG...TACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAACAGCAGTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR TCA 90 bp AGCTGGAACGCTTCCTGCGTATTAGTAGTGTCTTTTGAAACTACCACCGAAGAGACTGTGCCACTTGGATaGAAATCTGCACAGTGTCCT +
Preference number: 4 (lower is better)
Translates to: SWNASCVLVVSFETTTEETVPLG*KSAQCP
Trigger: AGGACACTGTGCAGATTTTCATCCAAGTGGCACAGT...CTCTTCGGTGGTAGTTTCAAAAGACACTACTAATACGCAGGAAGCGTTCCAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318522.10
CDS-3UTR TCA 90 bp ACAGTGATTCTCCATCACTGCCCATCCTGTTACCTGAACTTTATCACAAAATCAGTCTCATTTAAGGGCTaGGAAGGAGGCGGTGTGGGA +
Preference number: 4 (lower is better)
Translates to: TVILHHCPSCYLNFITKSVSFKG*EGGGVG
Trigger: TCCCACACCGCCTCCTTCTCAGCCCTTAAATGAGAC...TGATTTTGTGATAAAGTTCAGGTAACAGGATGGGCAGTGATGGAGAATCACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR GCA 90 bp GTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTAATTTGTGAGCGAAACCGTCCATCTTaGGGGGAAAGCGCCGGGCTC +
Preference number: 4 (lower is better)
Translates to: VFVSSIYITPLRYTVICERNRPS*GESAGL
Trigger: GAGCCCGGCGCTTTCCCCGCAAGATGGACGGTTTCG...CTCACAAATTACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR GCA 90 bp CCTCAAATAAACTCCCTGCTGATCACTGAGAGCTGTATTCCCCAGGTACTTAAATACTATCATCGAGACTaGCGGCGAAACCGTCCATCT +
Preference number: 4 (lower is better)
Translates to: PQINSLLITESCIPQVLKYYHRD*RRNRPS
Trigger: AGATGGACGGTTTCGCCGGCAGTCTCGATGATAGTA...TTTAAGTACCTGGGGAATACAGCTCTCAGTGATCAGCAGGGAGTTTATTTGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318522.10
CDS-3UTR GCA 90 bp GCAACTGCTGTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTACACCAAGGTCTCCGCTaGCCTCTTCACTCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: ATAVFVSSIYITPLRYTVHQGLR*PLHSPP
Trigger: AGGAGGAGAGTGAAGAGGGCAGCGGAGACCTTGGTG...TACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAACAGCAGTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR GCA 90 bp TGTCCTTGGGAGTTCACTGGAGTTTTCATATTACCAAATGATGATGAAATACCTGAGGGCGAAGGGTCTTaGTGGTCCTCCAGAAGGGTG +
Preference number: 4 (lower is better)
Translates to: CPWEFTGVFILPNDDEIPEGEGS*WSSRRV
Trigger: CACCCTTCTGGAGGACCAGCAAGACCCTTCGCCCTC...AGGTATTTCATCATCATTTGGTAATATGAAAACTCCAGTGAACTCCCAAGGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318522.10
CDS-3UTR CCA 90 bp ACAGTGATTCTCCATCACTGCCCATCCTGTTACCTGAACTTTATCACAAAATCAGGTTGTGAAGAGGGCTaGGGAGAAGGTGATGCTCGA +
Preference number: 4 (lower is better)
Translates to: TVILHHCPSCYLNFITKSGCEEG*GEGDAR
Trigger: TCGAGCATCACCTTCTCCCCAGCCCTCTTCACAACC...TGATTTTGTGATAAAGTTCAGGTAACAGGATGGGCAGTGATGGAGAATCACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318522.10
ENST00000401738.3
CDS-3UTR CCA 90 bp ACAGTGATTCTCCATCACTGCCCATCCTGTTACCTGAACTTTATCACAAAATCATCCCACACTCTGACGTaGGGTTGTAGAGGCCTTCCA +
Preference number: 4 (lower is better)
Translates to: TVILHHCPSCYLNFITKSSHTLT*GCRGLP
Trigger: TGGAAGGCCTCTACAACCCCACGTCAGAGTGTGGGA...TGATTTTGTGATAAAGTTCAGGTAACAGGATGGGCAGTGATGGAGAATCACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR CCA 90 bp ACAGTGATTCTCCATCACTGCCCATCCTGTTACCTGAACTTTATCACAAAATCACTGAGTGCGTTCCTATaGCCACCACTGTGCCACTTG +
Preference number: 4 (lower is better)
Translates to: TVILHHCPSCYLNFITKSLSAFL*PPLCHL
Trigger: CAAGTGGCACAGTGGTGGCCATAGGAACGCACTCAG...TGATTTTGTGATAAAGTTCAGGTAACAGGATGGGCAGTGATGGAGAATCACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR TCA 90 bp AGCTGGAACGCTTCCTGCGTATTAGTAGTGTCTTTTGAAACTACCACCGAAGAGGAGGCAGTTCCGTTCTaGTGTCATCATAGTTGTCAA +
Preference number: 4 (lower is better)
Translates to: SWNASCVLVVSFETTTEEEAVPF*CHHSCQ
Trigger: TTGACAACTATGATGACATCAGAACGGAACTGCCTC...CTCTTCGGTGGTAGTTTCAAAAGACACTACTAATACGCAGGAAGCGTTCCAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318522.10
CDS-3UTR TCA 90 bp ACAGTGATTCTCCATCACTGCCCATCCTGTTACCTGAACTTTATCACAAAATCACACACCTGCCTGTCCTaGGCACATGTCAAGAGCAAA +
Preference number: 4 (lower is better)
Translates to: TVILHHCPSCYLNFITKSHTCLS*AHVKSK
Trigger: TTTGCTCTTGACATGTGCTCAGGACAGGCAGGTGTG...TGATTTTGTGATAAAGTTCAGGTAACAGGATGGGCAGTGATGGAGAATCACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR TCA 90 bp GCAACTGCTGTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTAAACAAACCACCTGCCTaGGTGCGTTCCTATGGCCAC +
Preference number: 4 (lower is better)
Translates to: ATAVFVSSIYITPLRYTVNKPPA*VRSYGH
Trigger: GTGGCCATAGGAACGCACTCAGGCAGGTGGTTTGTT...TACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAACAGCAGTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR TCA 90 bp ACAGTGATTCTCCATCACTGCCCATCCTGTTACCTGAACTTTATCACAAAATCATGGGCACTGTACTTGTaGCTGGGAGCCTTTGCTTTG +
Preference number: 4 (lower is better)
Translates to: TVILHHCPSCYLNFITKSWALYL*LGAFAL
Trigger: CAAAGCAAAGGCTCCCAGTCACAAGTACAGTGCCCA...TGATTTTGTGATAAAGTTCAGGTAACAGGATGGGCAGTGATGGAGAATCACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR TCA 90 bp ACAGTGATTCTCCATCACTGCCCATCCTGTTACCTGAACTTTATCACAAAATCAGGAAAAGAGTTGCACTaGAGCCAGGGTGTTAGGACG +
Preference number: 4 (lower is better)
Translates to: TVILHHCPSCYLNFITKSGKELH*SQGVRT
Trigger: CGTCCTAACACCCTGGCTTCAGTGCAACTCTTTTCC...TGATTTTGTGATAAAGTTCAGGTAACAGGATGGGCAGTGATGGAGAATCACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR TCA 90 bp AGCTGGAACGCTTCCTGCGTATTAGTAGTGTCTTTTGAAACTACCACCGAAGAGAACCCCAAAGGTGACTaGTGTCCTCAAATAAACTCC +
Preference number: 4 (lower is better)
Translates to: SWNASCVLVVSFETTTEENPKGD*CPQINS
Trigger: GGAGTTTATTTGAGGACATCAGTCACCTTTGGGGTT...CTCTTCGGTGGTAGTTTCAAAAGACACTACTAATACGCAGGAAGCGTTCCAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318522.10
CDS-3UTR GCA 90 bp GCAACTGCTGTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTAAACCACCTGCCTGAGTaGGTTCCTATGGCCACCACT +
Preference number: 4 (lower is better)
Translates to: ATAVFVSSIYITPLRYTVNHLPE*VPMATT
Trigger: AGTGGTGGCCATAGGAACGCACTCAGGCAGGTGGTT...TACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAACAGCAGTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR GCA 90 bp ACAGTGATTCTCCATCACTGCCCATCCTGTTACCTGAACTTTATCACAAAATCACCAGAACAAACCACCTaGCTGAGTGCGTTCCTATGG +
Preference number: 4 (lower is better)
Translates to: TVILHHCPSCYLNFITKSPEQTT*LSAFLW
Trigger: CCATAGGAACGCACTCAGGCAGGTGGTTTGTTCTGG...TGATTTTGTGATAAAGTTCAGGTAACAGGATGGGCAGTGATGGAGAATCACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR GCA 90 bp ACAGTGATTCTCCATCACTGCCCATCCTGTTACCTGAACTTTATCACAAAATCAGTGACTGGGAGCCTTTaGTTTGGAGCAGGGATACTG +
Preference number: 4 (lower is better)
Translates to: TVILHHCPSCYLNFITKSVTGSL*FGAGIL
Trigger: CAGTATCCCTGCTCCAAAGCAAAGGCTCCCAGTCAC...TGATTTTGTGATAAAGTTCAGGTAACAGGATGGGCAGTGATGGAGAATCACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR GCA 90 bp ACAGTGATTCTCCATCACTGCCCATCCTGTTACCTGAACTTTATCACAAAATCAAGGGTGGCTTTGGCCTaGTCCTTGCTTATCTCGTTG +
Preference number: 4 (lower is better)
Translates to: TVILHHCPSCYLNFITKSRVALA*SLLISL
Trigger: CAACGAGATAAGCAAGGAGCAGGCCAAAGCCACCCT...TGATTTTGTGATAAAGTTCAGGTAACAGGATGGGCAGTGATGGAGAATCACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR GCA 90 bp GTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTAATTTGTGAGGAGGGCGAAGGGTCTTaGTGGTCCTCCAGAAGGGTG +
Preference number: 4 (lower is better)
Translates to: VFVSSIYITPLRYTVICEEGEGS*WSSRRV
Trigger: CACCCTTCTGGAGGACCAGCAAGACCCTTCGCCCTC...CTCACAAATTACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR CCA 90 bp ACAGTGATTCTCCATCACTGCCCATCCTGTTACCTGAACTTTATCACAAAATCACTGACATTGGTGACATaGCTGCTGTGGGCACTGTAC +
Preference number: 4 (lower is better)
Translates to: TVILHHCPSCYLNFITKSLTLVT*LLWALY
Trigger: GTACAGTGCCCACAGCAGCCATGTCACCAATGTCAG...TGATTTTGTGATAAAGTTCAGGTAACAGGATGGGCAGTGATGGAGAATCACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR CCA 90 bp GCAACTGCTGTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTACTCTCCTCCTCGCTGTaGTCTTCACTTGGCTCCACA +
Preference number: 4 (lower is better)
Translates to: ATAVFVSSIYITPLRYTVLSSSL*SSLGST
Trigger: TGTGGAGCCAAGTGAAGACCACAGCGAGGAGGAGAG...TACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAACAGCAGTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR CCA 90 bp GTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTAATTTGTGAGGGCGAAGGGTCTTGCTaGTCCTCCAGAAGGGTGGCT +
Preference number: 4 (lower is better)
Translates to: VFVSSIYITPLRYTVICEGEGSC*SSRRVA
Trigger: AGCCACCCTTCTGGAGGACCAGCAAGACCCTTCGCC...CTCACAAATTACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR TCA 90 bp AGCTGGAACGCTTCCTGCGTATTAGTAGTGTCTTTTGAAACTACCACCGAAGAGTTCTTTTCCTGCAATTaGGACAGCACTGGTATGACT +
Preference number: 4 (lower is better)
Translates to: SWNASCVLVVSFETTTEEFFSCN*DSTGMT
Trigger: AGTCATACCAGTGCTGTCTCAATTGCAGGAAAAGAA...CTCTTCGGTGGTAGTTTCAAAAGACACTACTAATACGCAGGAAGCGTTCCAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318522.10
CDS-3UTR TCA 90 bp GCAACTGCTGTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTATATTTGGAGAGGTTGTaGAGAGGGCTGGGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: ATAVFVSSIYITPLRYTVYLERL*RGLGRR
Trigger: CCTTCTCCCCAGCCCTCTTCACAACCTCTCCAAATA...TACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAACAGCAGTTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318522.10
ENST00000401738.3
CDS-3UTR TCA 90 bp TGTCCTTGGGAGTTCACTGGAGTTTTCATATTACCAAATGATGATGAAATACCTGTCTCATTTAAGGGCTaGGAAGGAGGCGGTGTGGGA +
Preference number: 4 (lower is better)
Translates to: CPWEFTGVFILPNDDEIPVSFKG*EGGGVG
Trigger: TCCCACACCGCCTCCTTCTCAGCCCTTAAATGAGAC...AGGTATTTCATCATCATTTGGTAATATGAAAACTCCAGTGAACTCCCAAGGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318522.10
CDS-3UTR TCA 90 bp GCAACTGCTGTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTAGGAAAAGAGTTGCACTaGAGCCAGGGTGTTAGGACG +
Preference number: 4 (lower is better)
Translates to: ATAVFVSSIYITPLRYTVGKELH*SQGVRT
Trigger: CGTCCTAACACCCTGGCTTCAGTGCAACTCTTTTCC...TACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAACAGCAGTTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR TCA 90 bp CCTCAAATAAACTCCCTGCTGATCACTGAGAGCTGTATTCCCCAGGTACTTAAAGACTGTTCCTCATTATaGCTTAGAAAAGGCAGCACC +
Preference number: 4 (lower is better)
Translates to: PQINSLLITESCIPQVLKDCSSL*LRKGST
Trigger: GGTGCTGCCTTTTCTAAGTCATAATGAGGAACAGTC...TTTAAGTACCTGGGGAATACAGCTCTCAGTGATCAGCAGGGAGTTTATTTGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318522.10
CDS-3UTR GCA 90 bp TTAATCTTCAAAATTTTCTGCCATGAGACAGGAATGCATGATAGCAATGGCTCAGGACATGGGAATAACTaGTCGAGGGCTTGGTTGGCC +
Preference number: 4 (lower is better)
Translates to: LIFKIFCHETGMHDSNGSGHGNN*SRAWLA
Trigger: GGCCAACCAAGCCCTCGAGCAGTTATTCCCATGTCC...TGAGCCATTGCTATCATGCATTCCTGTCTCATGGCAGAAAATTTTGAAGATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318522.10
CDS-3UTR GCA 90 bp AAAAATACCTTTCCAATGCATAATACATGCATTGCCCAAAAGAGTAGGATAGCCAACCACCTGCCTGAGTaGGTTCCTATGGCCACCACT +
Preference number: 4 (lower is better)
Translates to: KNTFPMHNTCIAQKSRIANHLPE*VPMATT
Trigger: AGTGGTGGCCATAGGAACGCACTCAGGCAGGTGGTT...GGCTATCCTACTCTTTTGGGCAATGCATGTATTATGCATTGGAAAGGTATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318522.10
CDS-3UTR GCA 90 bp GCTAACAGACAGATATATATGCCTGATACTTACTGGCGCGCTCCGATAAGTATGAGCTGGAATGTCCAGTaGACCTTCCATATCTGCTAT +
Preference number: 4 (lower is better)
Translates to: ANRQIYMPDTYWRAPISMSWNVQ*TFHICY
Trigger: ATAGCAGATATGGAAGGTGCACTGGACATTCCAGCT...CATACTTATCGGAGCGCGCCAGTAAGTATCAGGCATATATATCTGTCTGTTAGC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318522.10
CDS-3UTR GCA 90 bp GCAACTGCTGTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTAGTGACTGGGAGCCTTTaGTTTGGAGCAGGGATACTG +
Preference number: 4 (lower is better)
Translates to: ATAVFVSSIYITPLRYTVVTGSL*FGAGIL
Trigger: CAGTATCCCTGCTCCAAAGCAAAGGCTCCCAGTCAC...TACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAACAGCAGTTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR GCA 90 bp AGCTGGAACGCTTCCTGCGTATTAGTAGTGTCTTTTGAAACTACCACCGAAGAGCCTTGCTTATCTCGTTaGATGGCTCTTCATAAAGAG +
Preference number: 4 (lower is better)
Translates to: SWNASCVLVVSFETTTEEPCLSR*MALHKE
Trigger: CTCTTTATGAAGAGCCATGCAACGAGATAAGCAAGG...CTCTTCGGTGGTAGTTTCAAAAGACACTACTAATACGCAGGAAGCGTTCCAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318522.10
CDS-3UTR GCA 90 bp ACAGTGATTCTCCATCACTGCCCATCCTGTTACCTGAACTTTATCACAAAATCACTTTGGCCTGCTCCTTaGTTATCTCGTTGCATGGCT +
Preference number: 4 (lower is better)
Translates to: TVILHHCPSCYLNFITKSLWPAP*LSRCMA
Trigger: AGCCATGCAACGAGATAAGCAAGGAGCAGGCCAAAG...TGATTTTGTGATAAAGTTCAGGTAACAGGATGGGCAGTGATGGAGAATCACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR CCA 90 bp AAAAATACCTTTCCAATGCATAATACATGCATTGCCCAAAAGAGTAGGATAGCCGGTTGTGAAGAGGGCTaGGGAGAAGGTGATGCTCGA +
Preference number: 4 (lower is better)
Translates to: KNTFPMHNTCIAQKSRIAGCEEG*GEGDAR
Trigger: TCGAGCATCACCTTCTCCCCAGCCCTCTTCACAACC...GGCTATCCTACTCTTTTGGGCAATGCATGTATTATGCATTGGAAAGGTATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318522.10
CDS-3UTR CCA 90 bp TTAATCTTCAAAATTTTCTGCCATGAGACAGGAATGCATGATAGCAATGGCTCATCCCACACTCTGACGTaGGGTTGTAGAGGCCTTCCA +
Preference number: 4 (lower is better)
Translates to: LIFKIFCHETGMHDSNGSSHTLT*GCRGLP
Trigger: TGGAAGGCCTCTACAACCCCACGTCAGAGTGTGGGA...TGAGCCATTGCTATCATGCATTCCTGTCTCATGGCAGAAAATTTTGAAGATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318522.10
CDS-3UTR CCA 90 bp ACAGTGATTCTCCATCACTGCCCATCCTGTTACCTGAACTTTATCACAAAATCACACTGTACTTGTGACTaGGAGCCTTTGCTTTGGAGC +
Preference number: 4 (lower is better)
Translates to: TVILHHCPSCYLNFITKSHCTCD*EPLLWS
Trigger: GCTCCAAAGCAAAGGCTCCCAGTCACAAGTACAGTG...TGATTTTGTGATAAAGTTCAGGTAACAGGATGGGCAGTGATGGAGAATCACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR CCA 90 bp GCAACTGCTGTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTACTGACATTGGTGACATaGCTGCTGTGGGCACTGTAC +
Preference number: 4 (lower is better)
Translates to: ATAVFVSSIYITPLRYTVLTLVT*LLWALY
Trigger: GTACAGTGCCCACAGCAGCCATGTCACCAATGTCAG...TACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAACAGCAGTTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR CCA 90 bp ACAGTGATTCTCCATCACTGCCCATCCTGTTACCTGAACTTTATCACAAAATCAGCTGTGGTCTTCACTTaGCTCCACAGTTTGTTCCAG +
Preference number: 4 (lower is better)
Translates to: TVILHHCPSCYLNFITKSAVVFT*LHSLFQ
Trigger: CTGGAACAAACTGTGGAGCCAAGTGAAGACCACAGC...TGATTTTGTGATAAAGTTCAGGTAACAGGATGGGCAGTGATGGAGAATCACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR CCA 90 bp TGTCCTTGGGAGTTCACTGGAGTTTTCATATTACCAAATGATGATGAAATACCTCTCTCCTCCTCGCTGTaGTCTTCACTTGGCTCCACA +
Preference number: 4 (lower is better)
Translates to: CPWEFTGVFILPNDDEIPLSSSL*SSLGST
Trigger: TGTGGAGCCAAGTGAAGACCACAGCGAGGAGGAGAG...AGGTATTTCATCATCATTTGGTAATATGAAAACTCCAGTGAACTCCCAAGGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318522.10
CDS-3UTR CCA 90 bp CCTCAAATAAACTCCCTGCTGATCACTGAGAGCTGTATTCCCCAGGTACTTAAAGCTTATCTCGTTGCATaGCTCTTCATAAAGAGGCTC +
Preference number: 4 (lower is better)
Translates to: PQINSLLITESCIPQVLKAYLVA*LFIKRL
Trigger: GAGCCTCTTTATGAAGAGCCATGCAACGAGATAAGC...TTTAAGTACCTGGGGAATACAGCTCTCAGTGATCAGCAGGGAGTTTATTTGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318522.10
CDS-3UTR TCA 90 bp GTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTAATTTGTGAGGGGCTGGGGAGAAGGTaGTGCTCGAATTTGTGGACT +
Preference number: 4 (lower is better)
Translates to: VFVSSIYITPLRYTVICEGLGRR*CSNLWT
Trigger: AGTCCACAAATTCGAGCATCACCTTCTCCCCAGCCC...CTCACAAATTACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000318522.10
ENST00000401738.3
CDS-3UTR TCA 90 bp TTAATCTTCAAAATTTTCTGCCATGAGACAGGAATGCATGATAGCAATGGCTCATATTTGGAGAGGTTGTaGAGAGGGCTGGGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: LIFKIFCHETGMHDSNGSYLERL*RGLGRR
Trigger: CCTTCTCCCCAGCCCTCTTCACAACCTCTCCAAATA...TGAGCCATTGCTATCATGCATTCCTGTCTCATGGCAGAAAATTTTGAAGATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000318522.10
CDS-3UTR TCA 90 bp TGTCCTTGGGAGTTCACTGGAGTTTTCATATTACCAAATGATGATGAAATACCTATGCCCACTCCAGTTTaGGCTTCTCAGGAGGCAGTT +
Preference number: 4 (lower is better)
Translates to: CPWEFTGVFILPNDDEIPMPTPV*ASQEAV
Trigger: AACTGCCTCCTGAGAAGCTCAAACTGGAGTGGGCAT...AGGTATTTCATCATCATTTGGTAATATGAAAACTCCAGTGAACTCCCAAGGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318522.10
CDS-3UTR TCA 90 bp ACAGTGATTCTCCATCACTGCCCATCCTGTTACCTGAACTTTATCACAAAATCAAAGCATGACTCCACCTaGGTCTCCAGTAAGAACATC +
Preference number: 4 (lower is better)
Translates to: TVILHHCPSCYLNFITKSKHDST*VSSKNI
Trigger: GATGTTCTTACTGGAGACTCAGGTGGAGTCATGCTT...TGATTTTGTGATAAAGTTCAGGTAACAGGATGGGCAGTGATGGAGAATCACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR TCA 90 bp TGCCATGAGACAGGAATGCATGATAGCAATGGCTCAACATCTTCACATGAAACATCAAGAGCAAATCTTTaGAGGGATGTGTGGCAAGAC +
Preference number: 4 (lower is better)
Translates to: CHETGMHDSNGSTSSHETSRANL*RDVWQD
Trigger: GTCTTGCCACACATCCCTTCAAAGATTTGCTCTTGA...TGTTTCATGTGAAGATGTTGAGCCATTGCTATCATGCATTCCTGTCTCATGGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318522.10
CDS-3UTR TCA 90 bp GTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTAATTTGTGAGAACAAACCACCTGCCTaGGTGCGTTCCTATGGCCAC +
Preference number: 4 (lower is better)
Translates to: VFVSSIYITPLRYTVICENKPPA*VRSYGH
Trigger: GTGGCCATAGGAACGCACTCAGGCAGGTGGTTTGTT...CTCACAAATTACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR TCA 90 bp ACAGTGATTCTCCATCACTGCCCATCCTGTTACCTGAACTTTATCACAAAATCAGAAGGTACCATCTATTaGGTAGCGCATCACAGAGAG +
Preference number: 4 (lower is better)
Translates to: TVILHHCPSCYLNFITKSEGTIY*VAHHRE
Trigger: CTCTCTGTGATGCGCTACTCAATAGATGGTACCTTC...TGATTTTGTGATAAAGTTCAGGTAACAGGATGGGCAGTGATGGAGAATCACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR TCA 90 bp GCAACTGCTGTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTAACCAGTCAAGGTGTGTaGTGTAGCTGGAATGTCCAG +
Preference number: 4 (lower is better)
Translates to: ATAVFVSSIYITPLRYTVTSQGV*CSWNVQ
Trigger: CTGGACATTCCAGCTACATCACACACCTTGACTGGT...TACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAACAGCAGTTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR TCA 90 bp ACAGTGATTCTCCATCACTGCCCATCCTGTTACCTGAACTTTATCACAAAATCAATCGCACCAGTGCATTaGTATCTGTCCCATCAGATC +
Preference number: 4 (lower is better)
Translates to: TVILHHCPSCYLNFITKSIAPVH*YLSHQI
Trigger: GATCTGATGGGACAGATATCAATGCACTGGTGCGAT...TGATTTTGTGATAAAGTTCAGGTAACAGGATGGGCAGTGATGGAGAATCACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR TCA 90 bp AAAAATACCTTTCCAATGCATAATACATGCATTGCCCAAAAGAGTAGGATAGCCTGGGCACTGTACTTGTaGCTGGGAGCCTTTGCTTTG +
Preference number: 4 (lower is better)
Translates to: KNTFPMHNTCIAQKSRIAWALYL*LGAFAL
Trigger: CAAAGCAAAGGCTCCCAGTCACAAGTACAGTGCCCA...GGCTATCCTACTCTTTTGGGCAATGCATGTATTATGCATTGGAAAGGTATTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318522.10
CDS-3UTR TCA 90 bp GTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTAATTTGTGAGGTCTCATTTAAGGGCTaGGAAGGAGGCGGTGTGGGA +
Preference number: 4 (lower is better)
Translates to: VFVSSIYITPLRYTVICEVSFKG*EGGGVG
Trigger: TCCCACACCGCCTCCTTCTCAGCCCTTAAATGAGAC...CTCACAAATTACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR GCA 90 bp GCAACTGCTGTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTATACTATCATCGAGACTaGCGGCGAAACCGTCCATCT +
Preference number: 4 (lower is better)
Translates to: ATAVFVSSIYITPLRYTVYYHRD*RRNRPS
Trigger: AGATGGACGGTTTCGCCGGCAGTCTCGATGATAGTA...TACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAACAGCAGTTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR GCA 90 bp GTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTAATTTGTGAGGGACATGGGAATAACTaGTCGAGGGCTTGGTTGGCC +
Preference number: 4 (lower is better)
Translates to: VFVSSIYITPLRYTVICEGHGNN*SRAWLA
Trigger: GGCCAACCAAGCCCTCGAGCAGTTATTCCCATGTCC...CTCACAAATTACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR GCA 90 bp ACAGTGATTCTCCATCACTGCCCATCCTGTTACCTGAACTTTATCACAAAATCAATCTGCCTTTCCTTCTaGTACAGCTCTGATTGTGCC +
Preference number: 4 (lower is better)
Translates to: TVILHHCPSCYLNFITKSICLSF*YSSDCA
Trigger: GGCACAATCAGAGCTGTAGCAGAAGGAAAGGCAGAT...TGATTTTGTGATAAAGTTCAGGTAACAGGATGGGCAGTGATGGAGAATCACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR GCA 90 bp GTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTAATTTGTGAGAACCACCTGCCTGAGTaGGTTCCTATGGCCACCACT +
Preference number: 4 (lower is better)
Translates to: VFVSSIYITPLRYTVICENHLPE*VPMATT
Trigger: AGTGGTGGCCATAGGAACGCACTCAGGCAGGTGGTT...CTCACAAATTACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR GCA 90 bp GCAACTGCTGTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTAGTGGGATCGCACCAGTaGATTGATATCTGTCCCATC +
Preference number: 4 (lower is better)
Translates to: ATAVFVSSIYITPLRYTVVGSHQ*IDICPI
Trigger: GATGGGACAGATATCAATGCACTGGTGCGATCCCAC...TACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAACAGCAGTTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR GCA 90 bp GCAACTGCTGTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTACTTTGGCCTGCTCCTTaGTTATCTCGTTGCATGGCT +
Preference number: 4 (lower is better)
Translates to: ATAVFVSSIYITPLRYTVLWPAP*LSRCMA
Trigger: AGCCATGCAACGAGATAAGCAAGGAGCAGGCCAAAG...TACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAACAGCAGTTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR CCA 90 bp GTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTAATTTGTGAGTCCCACACTCTGACGTaGGGTTGTAGAGGCCTTCCA +
Preference number: 4 (lower is better)
Translates to: VFVSSIYITPLRYTVICESHTLT*GCRGLP
Trigger: TGGAAGGCCTCTACAACCCCACGTCAGAGTGTGGGA...CTCACAAATTACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR CCA 90 bp GCAACTGCTGTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTAATCTGCACAGTGTCCTaGTTCATCTACCAGCCTGGT +
Preference number: 4 (lower is better)
Translates to: ATAVFVSSIYITPLRYTVICTVS*FIYQPG
Trigger: ACCAGGCTGGTAGATGAACCAGGACACTGTGCAGAT...TACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAACAGCAGTTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR CCA 90 bp GTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTAATTTGTGAGCTGAGTGCGTTCCTATaGCCACCACTGTGCCACTTG +
Preference number: 4 (lower is better)
Translates to: VFVSSIYITPLRYTVICELSAFL*PPLCHL
Trigger: CAAGTGGCACAGTGGTGGCCATAGGAACGCACTCAG...CTCACAAATTACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR CCA 90 bp ACAGTGATTCTCCATCACTGCCCATCCTGTTACCTGAACTTTATCACAAAATCATGGGAGCCTTTGCTTTaGAGCAGGGATACTGAAACA +
Preference number: 4 (lower is better)
Translates to: TVILHHCPSCYLNFITKSWEPLL*SRDTET
Trigger: TGTTTCAGTATCCCTGCTCCAAAGCAAAGGCTCCCA...TGATTTTGTGATAAAGTTCAGGTAACAGGATGGGCAGTGATGGAGAATCACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR CCA 90 bp GCAACTGCTGTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTAGCTGTGGTCTTCACTTaGCTCCACAGTTTGTTCCAG +
Preference number: 4 (lower is better)
Translates to: ATAVFVSSIYITPLRYTVAVVFT*LHSLFQ
Trigger: CTGGAACAAACTGTGGAGCCAAGTGAAGACCACAGC...TACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAACAGCAGTTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR CCA 90 bp GTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTAATTTGTGAGCTCTCCTCCTCGCTGTaGTCTTCACTTGGCTCCACA +
Preference number: 4 (lower is better)
Translates to: VFVSSIYITPLRYTVICELSSSL*SSLGST
Trigger: TGTGGAGCCAAGTGAAGACCACAGCGAGGAGGAGAG...CTCACAAATTACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR TCA 90 bp GCAACTGCTGTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTAGCTGACAGGCGATCTTaGACATCAGAAGTACTTGCA +
Preference number: 4 (lower is better)
Translates to: ATAVFVSSIYITPLRYTVADRRS*TSEVLA
Trigger: TGCAAGTACTTCTGATGTTCAAGATCGCCTGTCAGC...TACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAACAGCAGTTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR TCA 90 bp ACAGTGATTCTCCATCACTGCCCATCCTGTTACCTGAACTTTATCACAAAATCAGAGACAGCACTGGTATaGCTTGGTTTTCTGTTTGCA +
Preference number: 4 (lower is better)
Translates to: TVILHHCPSCYLNFITKSETALV*LGFLFA
Trigger: TGCAAACAGAAAACCAAGTCATACCAGTGCTGTCTC...TGATTTTGTGATAAAGTTCAGGTAACAGGATGGGCAGTGATGGAGAATCACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR TCA 90 bp ACAGTGATTCTCCATCACTGCCCATCCTGTTACCTGAACTTTATCACAAAATCAGAGGCAGTTCCGTTCTaGTGTCATCATAGTTGTCAA +
Preference number: 4 (lower is better)
Translates to: TVILHHCPSCYLNFITKSEAVPF*CHHSCQ
Trigger: TTGACAACTATGATGACATCAGAACGGAACTGCCTC...TGATTTTGTGATAAAGTTCAGGTAACAGGATGGGCAGTGATGGAGAATCACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR TCA 90 bp GTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTAATTTGTGAGATGCCCACTCCAGTTTaGGCTTCTCAGGAGGCAGTT +
Preference number: 4 (lower is better)
Translates to: VFVSSIYITPLRYTVICEMPTPV*ASQEAV
Trigger: AACTGCCTCCTGAGAAGCTCAAACTGGAGTGGGCAT...CTCACAAATTACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR TCA 90 bp GCAACTGCTGTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTAAAGCATGACTCCACCTaGGTCTCCAGTAAGAACATC +
Preference number: 4 (lower is better)
Translates to: ATAVFVSSIYITPLRYTVKHDST*VSSKNI
Trigger: GATGTTCTTACTGGAGACTCAGGTGGAGTCATGCTT...TACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAACAGCAGTTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR TCA 90 bp GCAACTGCTGTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTACTTCTGCTACAGCTCTaGTTGTGCCATACTGATCAG +
Preference number: 4 (lower is better)
Translates to: ATAVFVSSIYITPLRYTVLLLQL*LCHTDQ
Trigger: CTGATCAGTATGGCACAATCAGAGCTGTAGCAGAAG...TACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAACAGCAGTTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR TCA 90 bp GTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTAATTTGTGAGCACACCTGCCTGTCCTaGGCACATGTCAAGAGCAAA +
Preference number: 4 (lower is better)
Translates to: VFVSSIYITPLRYTVICEHTCLS*AHVKSK
Trigger: TTTGCTCTTGACATGTGCTCAGGACAGGCAGGTGTG...CTCACAAATTACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR TCA 90 bp TTAATCTTCAAAATTTTCTGCCATGAGACAGGAATGCATGATAGCAATGGCTCAACCAGTCAAGGTGTGTaGTGTAGCTGGAATGTCCAG +
Preference number: 4 (lower is better)
Translates to: LIFKIFCHETGMHDSNGSTSQGV*CSWNVQ
Trigger: CTGGACATTCCAGCTACATCACACACCTTGACTGGT...TGAGCCATTGCTATCATGCATTCCTGTCTCATGGCAGAAAATTTTGAAGATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318522.10
CDS-3UTR TCA 90 bp GTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTAATTTGTGAGTGGGCACTGTACTTGTaGCTGGGAGCCTTTGCTTTG +
Preference number: 4 (lower is better)
Translates to: VFVSSIYITPLRYTVICEWALYL*LGAFAL
Trigger: CAAAGCAAAGGCTCCCAGTCACAAGTACAGTGCCCA...CTCACAAATTACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR TCA 90 bp TGCCATGAGACAGGAATGCATGATAGCAATGGCTCAACATCTTCACATGAAACAGCTACAGTCTCATTCTaGGGCAAAGATAACTTTTCC +
Preference number: 4 (lower is better)
Translates to: CHETGMHDSNGSTSSHETATVSF*GKDNFS
Trigger: GGAAAAGTTATCTTTGCCTCAGAATGAGACTGTAGC...TGTTTCATGTGAAGATGTTGAGCCATTGCTATCATGCATTCCTGTCTCATGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318522.10
CDS-3UTR TCA 90 bp GTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTAATTTGTGAGGGAAAAGAGTTGCACTaGAGCCAGGGTGTTAGGACG +
Preference number: 4 (lower is better)
Translates to: VFVSSIYITPLRYTVICEGKELH*SQGVRT
Trigger: CGTCCTAACACCCTGGCTTCAGTGCAACTCTTTTCC...CTCACAAATTACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR TCA 90 bp CTCTTTCTTCTCCAAGAACTGCCTGTTCATGTCAGTATATTTCTTGCAGGGAGTGCCCATCCTGTTACCTaGACTTTATCACAAAATCAC +
Preference number: 4 (lower is better)
Translates to: LFLLQELPVHVSIFLAGSAHPVT*TLSQNH
Trigger: GTGATTTTGTGATAAAGTTCAGGTAACAGGATGGGC...ACTCCCTGCAAGAAATATACTGACATGAACAGGCAGTTCTTGGAGAAGAAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318522.10
CDS-3UTR GCA 90 bp GCTAACAGACAGATATATATGCCTGATACTTACTGGCGCGCTCCGATAAGTATGATGATCTTCAGAGATTaGAAGACGCCTCAAAACATC +
Preference number: 4 (lower is better)
Translates to: ANRQIYMPDTYWRAPISMMIFRD*KTPQNI
Trigger: GATGTTTTGAGGCGTCTTGCAATCTCTGAAGATCAT...CATACTTATCGGAGCGCGCCAGTAAGTATCAGGCATATATATCTGTCTGTTAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318522.10
CDS-3UTR GCA 90 bp ACAGTGATTCTCCATCACTGCCCATCCTGTTACCTGAACTTTATCACAAAATCACCTTTTGCTTTCTTCTaGCAGTCCCATACAGTAAGC +
Preference number: 4 (lower is better)
Translates to: TVILHHCPSCYLNFITKSPFAFF*QSHTVS
Trigger: GCTTACTGTATGGGACTGGCAGAAGAAAGCAAAAGG...TGATTTTGTGATAAAGTTCAGGTAACAGGATGGGCAGTGATGGAGAATCACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR GCA 90 bp ACAGTGATTCTCCATCACTGCCCATCCTGTTACCTGAACTTTATCACAAAATCATTCTTGTTAGTGAATTaGCGCTCCAGGTCCAGAAGA +
Preference number: 4 (lower is better)
Translates to: TVILHHCPSCYLNFITKSFLLVN*RSRSRR
Trigger: TCTTCTGGACCTGGAGCGGCAATTCACTAACAAGAA...TGATTTTGTGATAAAGTTCAGGTAACAGGATGGGCAGTGATGGAGAATCACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR GCA 90 bp GCAACTGCTGTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTACTATGGCCACCACTGTaGCACTTGGATGAAAATCTG +
Preference number: 4 (lower is better)
Translates to: ATAVFVSSIYITPLRYTVLWPPL*HLDENL
Trigger: CAGATTTTCATCCAAGTGGCACAGTGGTGGCCATAG...TACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAACAGCAGTTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR GCA 90 bp ACAGTGATTCTCCATCACTGCCCATCCTGTTACCTGAACTTTATCACAAAATCAAGCTGGAATGTCCAGTaGACCTTCCATATCTGCTAT +
Preference number: 4 (lower is better)
Translates to: TVILHHCPSCYLNFITKSSWNVQ*TFHICY
Trigger: ATAGCAGATATGGAAGGTGCACTGGACATTCCAGCT...TGATTTTGTGATAAAGTTCAGGTAACAGGATGGGCAGTGATGGAGAATCACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR GCA 90 bp GTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTAATTTGTGAGGTGACTGGGAGCCTTTaGTTTGGAGCAGGGATACTG +
Preference number: 4 (lower is better)
Translates to: VFVSSIYITPLRYTVICEVTGSL*FGAGIL
Trigger: CAGTATCCCTGCTCCAAAGCAAAGGCTCCCAGTCAC...CTCACAAATTACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR GCA 90 bp GTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTAATTTGTGAGAGGGTGGCTTTGGCCTaGTCCTTGCTTATCTCGTTG +
Preference number: 4 (lower is better)
Translates to: VFVSSIYITPLRYTVICERVALA*SLLISL
Trigger: CAACGAGATAAGCAAGGAGCAGGCCAAAGCCACCCT...CTCACAAATTACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR GCA 90 bp GCTAACAGACAGATATATATGCCTGATACTTACTGGCGCGCTCCGATAAGTATGCCAATGCATAATACATaGATTGCCCAAAAGAGTAGG +
Preference number: 4 (lower is better)
Translates to: ANRQIYMPDTYWRAPISMPMHNT*IAQKSR
Trigger: CCTACTCTTTTGGGCAATGCATGTATTATGCATTGG...CATACTTATCGGAGCGCGCCAGTAAGTATCAGGCATATATATCTGTCTGTTAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318522.10
CDS-3UTR CCA 90 bp GCAACTGCTGTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTACACCACTGTGCCACTTaGATGAAAATCTGCACAGTG +
Preference number: 4 (lower is better)
Translates to: ATAVFVSSIYITPLRYTVHHCAT*MKICTV
Trigger: CACTGTGCAGATTTTCATCCAAGTGGCACAGTGGTG...TACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAACAGCAGTTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR CCA 90 bp GCAACTGCTGTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTACCCATCAGATCCTTCTaGCCAGACACCAAATACTTG +
Preference number: 4 (lower is better)
Translates to: ATAVFVSSIYITPLRYTVPIRSF*PDTKYL
Trigger: CAAGTATTTGGTGTCTGGCCAGAAGGATCTGATGGG...TACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAACAGCAGTTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR CCA 90 bp ACAGTGATTCTCCATCACTGCCCATCCTGTTACCTGAACTTTATCACAAAATCAATCACCTTTCTATTGTaGGATCGCACCAGTGCATTG +
Preference number: 4 (lower is better)
Translates to: TVILHHCPSCYLNFITKSITFLL*DRTSAL
Trigger: CAATGCACTGGTGCGATCCCACAATAGAAAGGTGAT...TGATTTTGTGATAAAGTTCAGGTAACAGGATGGGCAGTGATGGAGAATCACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR CCA 90 bp GCAACTGCTGTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTATGGGAGCCTTTGCTTTaGAGCAGGGATACTGAAACA +
Preference number: 4 (lower is better)
Translates to: ATAVFVSSIYITPLRYTVWEPLL*SRDTET
Trigger: TGTTTCAGTATCCCTGCTCCAAAGCAAAGGCTCCCA...TACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAACAGCAGTTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR CCA 90 bp CTCTTTCTTCTCCAAGAACTGCCTGTTCATGTCAGTATATTTCTTGCAGGGAGTTGTTCTCCAGAAGTGTaGGAGAACTGCTTATTCTAC +
Preference number: 4 (lower is better)
Translates to: LFLLQELPVHVSIFLAGSCSPEV*ENCLFY
Trigger: GTAGAATAAGCAGTTCTCCCACACTTCTGGAGAACA...ACTCCCTGCAAGAAATATACTGACATGAACAGGCAGTTCTTGGAGAAGAAAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318522.10
CDS-3UTR CCA 90 bp ACAGTGATTCTCCATCACTGCCCATCCTGTTACCTGAACTTTATCACAAAATCAGCTTATCTCGTTGCATaGCTCTTCATAAAGAGGCTC +
Preference number: 4 (lower is better)
Translates to: TVILHHCPSCYLNFITKSAYLVA*LFIKRL
Trigger: GAGCCTCTTTATGAAGAGCCATGCAACGAGATAAGC...TGATTTTGTGATAAAGTTCAGGTAACAGGATGGGCAGTGATGGAGAATCACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR TCA 90 bp GCAACTGCTGTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTATCATCTTCTTGTTGCTaGACTCGTGACTCAAGAGCT +
Preference number: 4 (lower is better)
Translates to: ATAVFVSSIYITPLRYTVSSSCC*TRDSRA
Trigger: AGCTCTTGAGTCACGAGTTCAGCAACAAGAAGATGA...TACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAACAGCAGTTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR TCA 90 bp GCAACTGCTGTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTACCGCCTTTAGCACAGTaGTTTCATCTTCTTGTTGCT +
Preference number: 4 (lower is better)
Translates to: ATAVFVSSIYITPLRYTVPPLAQ*FHLLVA
Trigger: AGCAACAAGAAGATGAAATCACTGTGCTAAAGGCGG...TACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAACAGCAGTTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR TCA 90 bp GCAACTGCTGTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTATTCACTGAGGCCACATaGTCTTCAGAGATTGCAAGA +
Preference number: 4 (lower is better)
Translates to: ATAVFVSSIYITPLRYTVFTEAT*SSEIAR
Trigger: TCTTGCAATCTCTGAAGATCATGTGGCCTCAGTGAA...TACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAACAGCAGTTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR TCA 90 bp ACAGTGATTCTCCATCACTGCCCATCCTGTTACCTGAACTTTATCACAAAATCATTCTTTTCCTGCAATTaGGACAGCACTGGTATGACT +
Preference number: 4 (lower is better)
Translates to: TVILHHCPSCYLNFITKSFFSCN*DSTGMT
Trigger: AGTCATACCAGTGCTGTCTCAATTGCAGGAAAAGAA...TGATTTTGTGATAAAGTTCAGGTAACAGGATGGGCAGTGATGGAGAATCACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR TCA 90 bp GCAACTGCTGTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTATTTGCATCTGTTGGGTaGAACTCCACAGCCAAAACA +
Preference number: 4 (lower is better)
Translates to: ATAVFVSSIYITPLRYTVFASVG*NSTAKT
Trigger: TGTTTTGGCTGTGGAGTTTCACCCAACAGATGCAAA...TACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAACAGCAGTTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR TCA 90 bp GCAACTGCTGTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTATCATCTGACAAAGTGTaGACACACTGCCATCATGAG +
Preference number: 4 (lower is better)
Translates to: ATAVFVSSIYITPLRYTVSSDKV*THCHHE
Trigger: CTCATGATGGCAGTGTGTTCACACTTTGTCAGATGA...TACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAACAGCAGTTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR TCA 90 bp TGTCCTTGGGAGTTCACTGGAGTTTTCATATTACCAAATGATGATGAAATACCTCTTCTGCTACAGCTCTaGTTGTGCCATACTGATCAG +
Preference number: 4 (lower is better)
Translates to: CPWEFTGVFILPNDDEIPLLLQL*LCHTDQ
Trigger: CTGATCAGTATGGCACAATCAGAGCTGTAGCAGAAG...AGGTATTTCATCATCATTTGGTAATATGAAAACTCCAGTGAACTCCCAAGGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318522.10
CDS-3UTR TCA 90 bp GCAACTGCTGTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTATCAAGAGCAAATCTTTaGAGGGATGTGTGGCAAGAC +
Preference number: 4 (lower is better)
Translates to: ATAVFVSSIYITPLRYTVSRANL*RDVWQD
Trigger: GTCTTGCCACACATCCCTTCAAAGATTTGCTCTTGA...TACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAACAGCAGTTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR TCA 90 bp ACAGTGATTCTCCATCACTGCCCATCCTGTTACCTGAACTTTATCACAAAATCACAGACACCAAATACTTaGAATCCTAGCACACAGGTA +
Preference number: 4 (lower is better)
Translates to: TVILHHCPSCYLNFITKSQTPNT*NPSTQV
Trigger: TACCTGTGTGCTAGGATTTCAAGTATTTGGTGTCTG...TGATTTTGTGATAAAGTTCAGGTAACAGGATGGGCAGTGATGGAGAATCACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR TCA 90 bp ACAGTGATTCTCCATCACTGCCCATCCTGTTACCTGAACTTTATCACAAAATCATTGGAGCAGGGATACTaGAACAGATGGACTTTACAA +
Preference number: 4 (lower is better)
Translates to: TVILHHCPSCYLNFITKSLEQGY*NRWTLQ
Trigger: TTGTAAAGTCCATCTGTTTCAGTATCCCTGCTCCAA...TGATTTTGTGATAAAGTTCAGGTAACAGGATGGGCAGTGATGGAGAATCACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR TCA 90 bp ACAGTGATTCTCCATCACTGCCCATCCTGTTACCTGAACTTTATCACAAAATCAGTCTTTTCCACCAGTTaGTATCAGGTGACTGTCATT +
Preference number: 4 (lower is better)
Translates to: TVILHHCPSCYLNFITKSVFSTS*YQVTVI
Trigger: AATGACAGTCACCTGATATCAACTGGTGGAAAAGAC...TGATTTTGTGATAAAGTTCAGGTAACAGGATGGGCAGTGATGGAGAATCACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR TCA 90 bp ACAGTGATTCTCCATCACTGCCCATCCTGTTACCTGAACTTTATCACAAAATCAAATCTCAATCAACAGTaGTTCTCCATCACTGCCCAT +
Preference number: 4 (lower is better)
Translates to: TVILHHCPSCYLNFITKSNLNQQ*FSITAH
Trigger: ATGGGCAGTGATGGAGAATCACTGTTGATTGAGATT...TGATTTTGTGATAAAGTTCAGGTAACAGGATGGGCAGTGATGGAGAATCACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR TCA 90 bp ACAGTGATTCTCCATCACTGCCCATCCTGTTACCTGAACTTTATCACAAAATCAATTACACATTTGGGGTaGGAGGGTATCTCAGTAAGA +
Preference number: 4 (lower is better)
Translates to: TVILHHCPSCYLNFITKSITHLG*EGISVR
Trigger: TCTTACTGAGATACCCTCTCACCCCAAATGTGTAAT...TGATTTTGTGATAAAGTTCAGGTAACAGGATGGGCAGTGATGGAGAATCACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR TCA 90 bp GCAACTGCTGTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTAGACTGTTCCTCATTATaGCTTAGAAAAGGCAGCACC +
Preference number: 4 (lower is better)
Translates to: ATAVFVSSIYITPLRYTVDCSSL*LRKGST
Trigger: GGTGCTGCCTTTTCTAAGTCATAATGAGGAACAGTC...TACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAACAGCAGTTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318522.10
ENST00000401738.3
CDS-3UTR TCA 90 bp GATAGCAATGGCTCAACATCTTCACATGAAACACTTGGATTCATTTTCATTCACACAGATATATATGCCTaGTACTTACTGGCGCGCTCC +
Preference number: 4 (lower is better)
Translates to: DSNGSTSSHETLGFIFIHTDIYA*YLLARS
Trigger: GGAGCGCGCCAGTAAGTATCAGGCATATATATCTGT...GTGAATGAAAATGAATCCAAGTGTTTCATGTGAAGATGTTGAGCCATTGCTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318522.10
CDS-3UTR TCA 90 bp GCTAACAGACAGATATATATGCCTGATACTTACTGGCGCGCTCCGATAAGTATGGAGTATAGCACATGCTaGTCTGATGATGTAATAATC +
Preference number: 4 (lower is better)
Translates to: ANRQIYMPDTYWRAPISMEYSTC*SDDVII
Trigger: GATTATTACATCATCAGATCAGCATGTGCTATACTC...CATACTTATCGGAGCGCGCCAGTAAGTATCAGGCATATATATCTGTCTGTTAGC
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318522.10
CDS-3UTR GCA 90 bp GCAACTGCTGTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTATTCTTGTTAGTGAATTaGCGCTCCAGGTCCAGAAGA +
Preference number: 4 (lower is better)
Translates to: ATAVFVSSIYITPLRYTVFLLVN*RSRSRR
Trigger: TCTTCTGGACCTGGAGCGGCAATTCACTAACAAGAA...TACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAACAGCAGTTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR GCA 90 bp AAAAATACCTTTCCAATGCATAATACATGCATTGCCCAAAAGAGTAGGATAGCCCTATGGCCACCACTGTaGCACTTGGATGAAAATCTG +
Preference number: 4 (lower is better)
Translates to: KNTFPMHNTCIAQKSRIALWPPL*HLDENL
Trigger: CAGATTTTCATCCAAGTGGCACAGTGGTGGCCATAG...GGCTATCCTACTCTTTTGGGCAATGCATGTATTATGCATTGGAAAGGTATTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000318522.10
CDS-3UTR GCA 90 bp GTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTAATTTGTGAGGTGGGATCGCACCAGTaGATTGATATCTGTCCCATC +
Preference number: 4 (lower is better)
Translates to: VFVSSIYITPLRYTVICEVGSHQ*IDICPI
Trigger: GATGGGACAGATATCAATGCACTGGTGCGATCCCAC...CTCACAAATTACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR GCA 90 bp ACAGTGATTCTCCATCACTGCCCATCCTGTTACCTGAACTTTATCACAAAATCACCTTGCTTATCTCGTTaGATGGCTCTTCATAAAGAG +
Preference number: 4 (lower is better)
Translates to: TVILHHCPSCYLNFITKSPCLSR*MALHKE
Trigger: CTCTTTATGAAGAGCCATGCAACGAGATAAGCAAGG...TGATTTTGTGATAAAGTTCAGGTAACAGGATGGGCAGTGATGGAGAATCACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR GCA 90 bp GATAGCAATGGCTCAACATCTTCACATGAAACACTTGGATTCATTTTCATTCACGTGATTCTCCATCACTaGCCATCCTGTTACCTGAAC +
Preference number: 4 (lower is better)
Translates to: DSNGSTSSHETLGFIFIHVILHH*PSCYLN
Trigger: GTTCAGGTAACAGGATGGGCAGTGATGGAGAATCAC...GTGAATGAAAATGAATCCAAGTGTTTCATGTGAAGATGTTGAGCCATTGCTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318522.10
CDS-3UTR GCA 90 bp AGCTGGAACGCTTCCTGCGTATTAGTAGTGTCTTTTGAAACTACCACCGAAGAGGTATTTTCAACGTGGTaGATATCTTCTTATCTAGAG +
Preference number: 4 (lower is better)
Translates to: SWNASCVLVVSFETTTEEVFSTW*ISSYLE
Trigger: CTCTAGATAAGAAGATATGCACCACGTTGAAAATAC...CTCTTCGGTGGTAGTTTCAAAAGACACTACTAATACGCAGGAAGCGTTCCAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318522.10
CDS-3UTR CCA 90 bp ACAGTGATTCTCCATCACTGCCCATCCTGTTACCTGAACTTTATCACAAAATCAAATGAACATGGTAATTaGCCGACCGCGCATAAACAT +
Preference number: 4 (lower is better)
Translates to: TVILHHCPSCYLNFITKSNEHGN*PTAHKH
Trigger: ATGTTTATGCGCGGTCGGCCAATTACCATGTTCATT...TGATTTTGTGATAAAGTTCAGGTAACAGGATGGGCAGTGATGGAGAATCACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR CCA 90 bp GCAACTGCTGTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTAGGTATTTGCATCTGTTaGGTGAAACTCCACAGCCAA +
Preference number: 4 (lower is better)
Translates to: ATAVFVSSIYITPLRYTVGICIC*VKLHSQ
Trigger: TTGGCTGTGGAGTTTCACCCAACAGATGCAAATACC...TACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAACAGCAGTTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR CCA 90 bp GTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTAATTTGTGAGATCTGCACAGTGTCCTaGTTCATCTACCAGCCTGGT +
Preference number: 4 (lower is better)
Translates to: VFVSSIYITPLRYTVICEICTVS*FIYQPG
Trigger: ACCAGGCTGGTAGATGAACCAGGACACTGTGCAGAT...CTCACAAATTACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR CCA 90 bp ACAGTGATTCTCCATCACTGCCCATCCTGTTACCTGAACTTTATCACAAAATCATATATACTTGTTGTCTaGGGACCAGTCAAGGTGTGT +
Preference number: 4 (lower is better)
Translates to: TVILHHCPSCYLNFITKSYILVV*GPVKVC
Trigger: ACACACCTTGACTGGTCCCCAGACAACAAGTATATA...TGATTTTGTGATAAAGTTCAGGTAACAGGATGGGCAGTGATGGAGAATCACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR CCA 90 bp TTAATCTTCAAAATTTTCTGCCATGAGACAGGAATGCATGATAGCAATGGCTCACCCATCAGATCCTTCTaGCCAGACACCAAATACTTG +
Preference number: 4 (lower is better)
Translates to: LIFKIFCHETGMHDSNGSPIRSF*PDTKYL
Trigger: CAAGTATTTGGTGTCTGGCCAGAAGGATCTGATGGG...TGAGCCATTGCTATCATGCATTCCTGTCTCATGGCAGAAAATTTTGAAGATTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318522.10
CDS-3UTR CCA 90 bp TTGAAACTACCACCGAAGAGTATCATGATTATAAATCTCATTGTACATGGCAACCACTGTACTTGTGACTaGGAGCCTTTGCTTTGGAGC +
Preference number: 4 (lower is better)
Translates to: LKLPPKSIMIINLIVHGNHCTCD*EPLLWS
Trigger: GCTCCAAAGCAAAGGCTCCCAGTCACAAGTACAGTG...GTTGCCATGTACAATGAGATTTATAATCATGATACTCTTCGGTGGTAGTTTCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318522.10
CDS-3UTR CCA 90 bp GTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTAATTTGTGAGCACTGTACTTGTGACTaGGAGCCTTTGCTTTGGAGC +
Preference number: 4 (lower is better)
Translates to: VFVSSIYITPLRYTVICEHCTCD*EPLLWS
Trigger: GCTCCAAAGCAAAGGCTCCCAGTCACAAGTACAGTG...CTCACAAATTACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR CCA 90 bp CCTGCATACTTAAGACTTCTTAACTCATCCAAAGTTTCTAAACATGATTTGACCGCTGTGGTCTTCACTTaGCTCCACAGTTTGTTCCAG +
Preference number: 4 (lower is better)
Translates to: PAYLRLLNSSKVSKHDLTAVVFT*LHSLFQ
Trigger: CTGGAACAAACTGTGGAGCCAAGTGAAGACCACAGC...GGTCAAATCATGTTTAGAAACTTTGGATGAGTTAAGAAGTCTTAAGTATGCAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318522.10
CDS-3UTR CCA 90 bp GCAACTGCTGTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTAGCTTATCTCGTTGCATaGCTCTTCATAAAGAGGCTC +
Preference number: 4 (lower is better)
Translates to: ATAVFVSSIYITPLRYTVAYLVA*LFIKRL
Trigger: GAGCCTCTTTATGAAGAGCCATGCAACGAGATAAGC...TACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAACAGCAGTTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR TCA 90 bp GTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTAATTTGTGAGGCTGACAGGCGATCTTaGACATCAGAAGTACTTGCA +
Preference number: 4 (lower is better)
Translates to: VFVSSIYITPLRYTVICEADRRS*TSEVLA
Trigger: TGCAAGTACTTCTGATGTTCAAGATCGCCTGTCAGC...CTCACAAATTACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR TCA 90 bp GCAACTGCTGTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTATTCTTTTCCTGCAATTaGGACAGCACTGGTATGACT +
Preference number: 4 (lower is better)
Translates to: ATAVFVSSIYITPLRYTVFFSCN*DSTGMT
Trigger: AGTCATACCAGTGCTGTCTCAATTGCAGGAAAAGAA...TACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAACAGCAGTTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR TCA 90 bp GATAGCAATGGCTCAACATCTTCACATGAAACACTTGGATTCATTTTCATTCACTTTGCATCTGTTGGGTaGAACTCCACAGCCAAAACA +
Preference number: 4 (lower is better)
Translates to: DSNGSTSSHETLGFIFIHFASVG*NSTAKT
Trigger: TGTTTTGGCTGTGGAGTTTCACCCAACAGATGCAAA...GTGAATGAAAATGAATCCAAGTGTTTCATGTGAAGATGTTGAGCCATTGCTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318522.10
CDS-3UTR TCA 90 bp GCAACTGCTGTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTACTGATTGTGCCATACTaGTCAGGAACCTCTATTTCT +
Preference number: 4 (lower is better)
Translates to: ATAVFVSSIYITPLRYTVLIVPY*SGTSIS
Trigger: AGAAATAGAGGTTCCTGATCAGTATGGCACAATCAG...TACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAACAGCAGTTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR TCA 90 bp GTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTAATTTGTGAGCTTCTGCTACAGCTCTaGTTGTGCCATACTGATCAG +
Preference number: 4 (lower is better)
Translates to: VFVSSIYITPLRYTVICELLLQL*LCHTDQ
Trigger: CTGATCAGTATGGCACAATCAGAGCTGTAGCAGAAG...CTCACAAATTACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR TCA 90 bp GTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTAATTTGTGAGACTGTGCCACTTGGATaGAAATCTGCACAGTGTCCT +
Preference number: 4 (lower is better)
Translates to: VFVSSIYITPLRYTVICETVPLG*KSAQCP
Trigger: AGGACACTGTGCAGATTTTCATCCAAGTGGCACAGT...CTCACAAATTACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR TCA 90 bp GTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTAATTTGTGAGGAAGGTACCATCTATTaGGTAGCGCATCACAGAGAG +
Preference number: 4 (lower is better)
Translates to: VFVSSIYITPLRYTVICEEGTIY*VAHHRE
Trigger: CTCTCTGTGATGCGCTACTCAATAGATGGTACCTTC...CTCACAAATTACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR TCA 90 bp GCAACTGCTGTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTAAATCCGATCGATTCCTaGTTAGTTTGCAGCCATTTG +
Preference number: 4 (lower is better)
Translates to: ATAVFVSSIYITPLRYTVNPIDS*LVCSHL
Trigger: CAAATGGCTGCAAACTAATCAGGAATCGATCGGATT...TACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAACAGCAGTTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR TCA 90 bp GTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTAATTTGTGAGATCGCACCAGTGCATTaGTATCTGTCCCATCAGATC +
Preference number: 4 (lower is better)
Translates to: VFVSSIYITPLRYTVICEIAPVH*YLSHQI
Trigger: GATCTGATGGGACAGATATCAATGCACTGGTGCGAT...CTCACAAATTACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR TCA 90 bp GCAACTGCTGTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTATTGGAGCAGGGATACTaGAACAGATGGACTTTACAA +
Preference number: 4 (lower is better)
Translates to: ATAVFVSSIYITPLRYTVLEQGY*NRWTLQ
Trigger: TTGTAAAGTCCATCTGTTTCAGTATCCCTGCTCCAA...TACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAACAGCAGTTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR TCA 90 bp GCAACTGCTGTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTAGTCTTTTCCACCAGTTaGTATCAGGTGACTGTCATT +
Preference number: 4 (lower is better)
Translates to: ATAVFVSSIYITPLRYTVVFSTS*YQVTVI
Trigger: AATGACAGTCACCTGATATCAACTGGTGGAAAAGAC...TACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAACAGCAGTTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR TCA 90 bp ACAGTGATTCTCCATCACTGCCCATCCTGTTACCTGAACTTTATCACAAAATCATCCACAAGTTTCCACTaGATGATGCTCATGTCTTTT +
Preference number: 4 (lower is better)
Translates to: TVILHHCPSCYLNFITKSSTSFH*MMLMSF
Trigger: AAAAGACATGAGCATCATTCAGTGGAAACTTGTGGA...TGATTTTGTGATAAAGTTCAGGTAACAGGATGGGCAGTGATGGAGAATCACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR TCA 90 bp GCAACTGCTGTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTAGCTACAGTCTCATTCTaGGGCAAAGATAACTTTTCC +
Preference number: 4 (lower is better)
Translates to: ATAVFVSSIYITPLRYTVATVSF*GKDNFS
Trigger: GGAAAAGTTATCTTTGCCTCAGAATGAGACTGTAGC...TACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAACAGCAGTTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR TCA 90 bp GCAACTGCTGTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTAGCCCATCCTGTTACCTaGACTTTATCACAAAATCAC +
Preference number: 4 (lower is better)
Translates to: ATAVFVSSIYITPLRYTVAHPVT*TLSQNH
Trigger: GTGATTTTGTGATAAAGTTCAGGTAACAGGATGGGC...TACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAACAGCAGTTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR TCA 90 bp GCAACTGCTGTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTAATTACACATTTGGGGTaGGAGGGTATCTCAGTAAGA +
Preference number: 4 (lower is better)
Translates to: ATAVFVSSIYITPLRYTVITHLG*EGISVR
Trigger: TCTTACTGAGATACCCTCTCACCCCAAATGTGTAAT...TACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAACAGCAGTTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR TCA 90 bp TGTCCTTGGGAGTTCACTGGAGTTTTCATATTACCAAATGATGATGAAATACCTTGGCAACCCCAAAGGTaGCTGATGTCCTCAAATAAA +
Preference number: 4 (lower is better)
Translates to: CPWEFTGVFILPNDDEIPWQPQR*LMSSNK
Trigger: TTTATTTGAGGACATCAGTCACCTTTGGGGTTGCCA...AGGTATTTCATCATCATTTGGTAATATGAAAACTCCAGTGAACTCCCAAGGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318522.10
CDS-3UTR TCA 90 bp CTCTTTCTTCTCCAAGAACTGCCTGTTCATGTCAGTATATTTCTTGCAGGGAGTATTAGTAGTGTCTTTTaGAACTACCACCGAAGAGTA +
Preference number: 4 (lower is better)
Translates to: LFLLQELPVHVSIFLAGSISSVF*NYHRRV
Trigger: TACTCTTCGGTGGTAGTTTCAAAAGACACTACTAAT...ACTCCCTGCAAGAAATATACTGACATGAACAGGCAGTTCTTGGAGAAGAAAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318522.10
CDS-3UTR GCA 90 bp ACAGTGATTCTCCATCACTGCCCATCCTGTTACCTGAACTTTATCACAAAATCAATGATCTTCAGAGATTaGAAGACGCCTCAAAACATC +
Preference number: 4 (lower is better)
Translates to: TVILHHCPSCYLNFITKSMIFRD*KTPQNI
Trigger: GATGTTTTGAGGCGTCTTGCAATCTCTGAAGATCAT...TGATTTTGTGATAAAGTTCAGGTAACAGGATGGGCAGTGATGGAGAATCACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR GCA 90 bp GTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTAATTTGTGAGATCTGCCTTTCCTTCTaGTACAGCTCTGATTGTGCC +
Preference number: 4 (lower is better)
Translates to: VFVSSIYITPLRYTVICEICLSF*YSSDCA
Trigger: GGCACAATCAGAGCTGTAGCAGAAGGAAAGGCAGAT...CTCACAAATTACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR GCA 90 bp GTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTAATTTGTGAGCTATGGCCACCACTGTaGCACTTGGATGAAAATCTG +
Preference number: 4 (lower is better)
Translates to: VFVSSIYITPLRYTVICELWPPL*HLDENL
Trigger: CAGATTTTCATCCAAGTGGCACAGTGGTGGCCATAG...CTCACAAATTACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR GCA 90 bp GCAACTGCTGTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTACCTTGCTTATCTCGTTaGATGGCTCTTCATAAAGAG +
Preference number: 4 (lower is better)
Translates to: ATAVFVSSIYITPLRYTVPCLSR*MALHKE
Trigger: CTCTTTATGAAGAGCCATGCAACGAGATAAGCAAGG...TACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAACAGCAGTTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR CCA 90 bp GCAACTGCTGTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTAAATGAACATGGTAATTaGCCGACCGCGCATAAACAT +
Preference number: 4 (lower is better)
Translates to: ATAVFVSSIYITPLRYTVNEHGN*PTAHKH
Trigger: ATGTTTATGCGCGGTCGGCCAATTACCATGTTCATT...TACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAACAGCAGTTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR CCA 90 bp GATAGCAATGGCTCAACATCTTCACATGAAACACTTGGATTCATTTTCATTCACGGTATTTGCATCTGTTaGGTGAAACTCCACAGCCAA +
Preference number: 4 (lower is better)
Translates to: DSNGSTSSHETLGFIFIHGICIC*VKLHSQ
Trigger: TTGGCTGTGGAGTTTCACCCAACAGATGCAAATACC...GTGAATGAAAATGAATCCAAGTGTTTCATGTGAAGATGTTGAGCCATTGCTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318522.10
CDS-3UTR CCA 90 bp GCAACTGCTGTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTATCATTCCCGTCTGTGTaGATAGAAACTAGATCTCTG +
Preference number: 4 (lower is better)
Translates to: ATAVFVSSIYITPLRYTVSFPSV*IETRSL
Trigger: CAGAGATCTAGTTTCTATCCACACAGACGGGAATGA...TACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAACAGCAGTTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR CCA 90 bp GCAACTGCTGTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTATATATACTTGTTGTCTaGGGACCAGTCAAGGTGTGT +
Preference number: 4 (lower is better)
Translates to: ATAVFVSSIYITPLRYTVYILVV*GPVKVC
Trigger: ACACACCTTGACTGGTCCCCAGACAACAAGTATATA...TACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAACAGCAGTTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR CCA 90 bp GTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTAATTTGTGAGCCCATCAGATCCTTCTaGCCAGACACCAAATACTTG +
Preference number: 4 (lower is better)
Translates to: VFVSSIYITPLRYTVICEPIRSF*PDTKYL
Trigger: CAAGTATTTGGTGTCTGGCCAGAAGGATCTGATGGG...CTCACAAATTACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR CCA 90 bp TTAATCTTCAAAATTTTCTGCCATGAGACAGGAATGCATGATAGCAATGGCTCAATCACCTTTCTATTGTaGGATCGCACCAGTGCATTG +
Preference number: 4 (lower is better)
Translates to: LIFKIFCHETGMHDSNGSITFLL*DRTSAL
Trigger: CAATGCACTGGTGCGATCCCACAATAGAAAGGTGAT...TGAGCCATTGCTATCATGCATTCCTGTCTCATGGCAGAAAATTTTGAAGATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318522.10
CDS-3UTR CCA 90 bp TTGAAACTACCACCGAAGAGTATCATGATTATAAATCTCATTGTACATGGCAACTGGGAGCCTTTGCTTTaGAGCAGGGATACTGAAACA +
Preference number: 4 (lower is better)
Translates to: LKLPPKSIMIINLIVHGNWEPLL*SRDTET
Trigger: TGTTTCAGTATCCCTGCTCCAAAGCAAAGGCTCCCA...GTTGCCATGTACAATGAGATTTATAATCATGATACTCTTCGGTGGTAGTTTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318522.10
CDS-3UTR CCA 90 bp GTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTAATTTGTGAGATGCCTGATACTTACTaGCGCGCTCCGATAAGTATG +
Preference number: 4 (lower is better)
Translates to: VFVSSIYITPLRYTVICEMPDTY*RAPISM
Trigger: CATACTTATCGGAGCGCGCCAGTAAGTATCAGGCAT...CTCACAAATTACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318522.10
CDS-3UTR TCA 90 bp CCTGCATACTTAAGACTTCTTAACTCATCCAAAGTTTCTAAACATGATTTGACCCCGCCTTTAGCACAGTaGTTTCATCTTCTTGTTGCT +
Preference number: 4 (lower is better)
Translates to: PAYLRLLNSSKVSKHDLTPPLAQ*FHLLVA
Trigger: AGCAACAAGAAGATGAAATCACTGTGCTAAAGGCGG...GGTCAAATCATGTTTAGAAACTTTGGATGAGTTAAGAAGTCTTAAGTATGCAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318522.10
CDS-3UTR TCA 90 bp GTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTAATTTGTGAGTTCACTGAGGCCACATaGTCTTCAGAGATTGCAAGA +
Preference number: 4 (lower is better)
Translates to: VFVSSIYITPLRYTVICEFTEAT*SSEIAR
Trigger: TCTTGCAATCTCTGAAGATCATGTGGCCTCAGTGAA...CTCACAAATTACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR TCA 90 bp TTGAAACTACCACCGAAGAGTATCATGATTATAAATCTCATTGTACATGGCAACGAGACAGCACTGGTATaGCTTGGTTTTCTGTTTGCA +
Preference number: 4 (lower is better)
Translates to: LKLPPKSIMIINLIVHGNETALV*LGFLFA
Trigger: TGCAAACAGAAAACCAAGTCATACCAGTGCTGTCTC...GTTGCCATGTACAATGAGATTTATAATCATGATACTCTTCGGTGGTAGTTTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318522.10
CDS-3UTR TCA 90 bp ACAGTGATTCTCCATCACTGCCCATCCTGTTACCTGAACTTTATCACAAAATCACTACTACTGATGCAATaGAATAAACTATTTTCCCGG +
Preference number: 4 (lower is better)
Translates to: TVILHHCPSCYLNFITKSLLLMQ*NKLFSR
Trigger: CCGGGAAAATAGTTTATTTCATTGCATCAGTAGTAG...TGATTTTGTGATAAAGTTCAGGTAACAGGATGGGCAGTGATGGAGAATCACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR TCA 90 bp GTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTAATTTGTGAGTTTGCATCTGTTGGGTaGAACTCCACAGCCAAAACA +
Preference number: 4 (lower is better)
Translates to: VFVSSIYITPLRYTVICEFASVG*NSTAKT
Trigger: TGTTTTGGCTGTGGAGTTTCACCCAACAGATGCAAA...CTCACAAATTACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR TCA 90 bp AAAAATACCTTTCCAATGCATAATACATGCATTGCCCAAAAGAGTAGGATAGCCAACACACTGCCATCATaGGCTTTGATTTGTTTGCTG +
Preference number: 4 (lower is better)
Translates to: KNTFPMHNTCIAQKSRIANTLPS*ALICLL
Trigger: CAGCAAACAAATCAAAGCTCATGATGGCAGTGTGTT...GGCTATCCTACTCTTTTGGGCAATGCATGTATTATGCATTGGAAAGGTATTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318522.10
CDS-3UTR TCA 90 bp GTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTAATTTGTGAGTCATCTGACAAAGTGTaGACACACTGCCATCATGAG +
Preference number: 4 (lower is better)
Translates to: VFVSSIYITPLRYTVICESSDKV*THCHHE
Trigger: CTCATGATGGCAGTGTGTTCACACTTTGTCAGATGA...CTCACAAATTACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR TCA 90 bp GTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTAATTTGTGAGTCAAGAGCAAATCTTTaGAGGGATGTGTGGCAAGAC +
Preference number: 4 (lower is better)
Translates to: VFVSSIYITPLRYTVICESRANL*RDVWQD
Trigger: GTCTTGCCACACATCCCTTCAAAGATTTGCTCTTGA...CTCACAAATTACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR TCA 90 bp GATAGCAATGGCTCAACATCTTCACATGAAACACTTGGATTCATTTTCATTCACAATCCGATCGATTCCTaGTTAGTTTGCAGCCATTTG +
Preference number: 4 (lower is better)
Translates to: DSNGSTSSHETLGFIFIHNPIDS*LVCSHL
Trigger: CAAATGGCTGCAAACTAATCAGGAATCGATCGGATT...GTGAATGAAAATGAATCCAAGTGTTTCATGTGAAGATGTTGAGCCATTGCTATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318522.10
CDS-3UTR TCA 90 bp GCAACTGCTGTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTATCCACAAGTTTCCACTaGATGATGCTCATGTCTTTT +
Preference number: 4 (lower is better)
Translates to: ATAVFVSSIYITPLRYTVSTSFH*MMLMSF
Trigger: AAAAGACATGAGCATCATTCAGTGGAAACTTGTGGA...TACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAACAGCAGTTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR TCA 90 bp TGTCCTTGGGAGTTCACTGGAGTTTTCATATTACCAAATGATGATGAAATACCTCATAGAGATCTACACTaGGTATTTTCAACGTGGTGC +
Preference number: 4 (lower is better)
Translates to: CPWEFTGVFILPNDDEIPHRDLH*VFSTWC
Trigger: GCACCACGTTGAAAATACTCAGTGTAGATCTCTATG...AGGTATTTCATCATCATTTGGTAATATGAAAACTCCAGTGAACTCCCAAGGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318522.10
CDS-3UTR GCA 90 bp ACAGTGATTCTCCATCACTGCCCATCCTGTTACCTGAACTTTATCACAAAATCAACTTGGTTTTCTGTTTaGACCACTTCCATTGGTTAT +
Preference number: 4 (lower is better)
Translates to: TVILHHCPSCYLNFITKSTWFSV*TTSIGY
Trigger: ATAACCAATGGAAGTGGTGCAAACAGAAAACCAAGT...TGATTTTGTGATAAAGTTCAGGTAACAGGATGGGCAGTGATGGAGAATCACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR GCA 90 bp CTCTTTCTTCTCCAAGAACTGCCTGTTCATGTCAGTATATTTCTTGCAGGGAGTATGATGACATCTTTATaGTTGTCTGCAGTTTTGGTA +
Preference number: 4 (lower is better)
Translates to: LFLLQELPVHVSIFLAGSMMTSL*LSAVLV
Trigger: TACCAAAACTGCAGACAAGCATAAAGATGTCATCAT...ACTCCCTGCAAGAAATATACTGACATGAACAGGCAGTTCTTGGAGAAGAAAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318522.10
CDS-3UTR GCA 90 bp GTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTAATTTGTGAGCCTTTTGCTTTCTTCTaGCAGTCCCATACAGTAAGC +
Preference number: 4 (lower is better)
Translates to: VFVSSIYITPLRYTVICEPFAFF*QSHTVS
Trigger: GCTTACTGTATGGGACTGGCAGAAGAAAGCAAAAGG...CTCACAAATTACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR GCA 90 bp GCAACTGCTGTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTAGAAGTGTGGGAGAACTaGTTATTCTACTTTCCTCTT +
Preference number: 4 (lower is better)
Translates to: ATAVFVSSIYITPLRYTVEVWEN*LFYFPL
Trigger: AAGAGGAAAGTAGAATAAGCAGTTCTCCCACACTTC...TACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAACAGCAGTTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR GCA 90 bp CCTGCATACTTAAGACTTCTTAACTCATCCAAAGTTTCTAAACATGATTTGACCCTGAAGGAAAAGAGTTaGACTGAAGCCAGGGTGTTA +
Preference number: 4 (lower is better)
Translates to: PAYLRLLNSSKVSKHDLTLKEKS*TEARVL
Trigger: TAACACCCTGGCTTCAGTGCAACTCTTTTCCTTCAG...GGTCAAATCATGTTTAGAAACTTTGGATGAGTTAAGAAGTCTTAAGTATGCAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318522.10
CDS-3UTR GCA 90 bp GTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTAATTTGTGAGCTGAAGGAAAAGAGTTaGACTGAAGCCAGGGTGTTA +
Preference number: 4 (lower is better)
Translates to: VFVSSIYITPLRYTVICELKEKS*TEARVL
Trigger: TAACACCCTGGCTTCAGTGCAACTCTTTTCCTTCAG...CTCACAAATTACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR GCA 90 bp AAAAATACCTTTCCAATGCATAATACATGCATTGCCCAAAAGAGTAGGATAGCCAGCTGGAACGCTTCCTaGGTATTAGTAGTGTCTTTT +
Preference number: 4 (lower is better)
Translates to: KNTFPMHNTCIAQKSRIASWNAS*VLVVSF
Trigger: AAAAGACACTACTAATACGCAGGAAGCGTTCCAGCT...GGCTATCCTACTCTTTTGGGCAATGCATGTATTATGCATTGGAAAGGTATTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318522.10
CDS-3UTR CCA 90 bp AAAAATACCTTTCCAATGCATAATACATGCATTGCCCAAAAGAGTAGGATAGCCTTGCACCACTTCCATTaGTTATACAGGACATGGGAA +
Preference number: 4 (lower is better)
Translates to: KNTFPMHNTCIAQKSRIALHHFH*LYRTWE
Trigger: TTCCCATGTCCTGTATAACCAATGGAAGTGGTGCAA...GGCTATCCTACTCTTTTGGGCAATGCATGTATTATGCATTGGAAAGGTATTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318522.10
CDS-3UTR CCA 90 bp CCTGCATACTTAAGACTTCTTAACTCATCCAAAGTTTCTAAACATGATTTGACCGTTTGTCTGTGTATTTaGAGAGGTTGTGAAGAGGGC +
Preference number: 4 (lower is better)
Translates to: PAYLRLLNSSKVSKHDLTVCLCI*RGCEEG
Trigger: GCCCTCTTCACAACCTCTCCAAATACACAGACAAAC...GGTCAAATCATGTTTAGAAACTTTGGATGAGTTAAGAAGTCTTAAGTATGCAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318522.10
CDS-3UTR CCA 90 bp GTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTAATTTGTGAGGTTTGTCTGTGTATTTaGAGAGGTTGTGAAGAGGGC +
Preference number: 4 (lower is better)
Translates to: VFVSSIYITPLRYTVICEVCLCI*RGCEEG
Trigger: GCCCTCTTCACAACCTCTCCAAATACACAGACAAAC...CTCACAAATTACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318522.10
ENST00000401738.3
CDS-3UTR CCA 90 bp GTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTAATTTGTGAGGGTATTTGCATCTGTTaGGTGAAACTCCACAGCCAA +
Preference number: 4 (lower is better)
Translates to: VFVSSIYITPLRYTVICEGICIC*VKLHSQ
Trigger: TTGGCTGTGGAGTTTCACCCAACAGATGCAAATACC...CTCACAAATTACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR CCA 90 bp TGTCCTTGGGAGTTCACTGGAGTTTTCATATTACCAAATGATGATGAAATACCTTCATTCCCGTCTGTGTaGATAGAAACTAGATCTCTG +
Preference number: 4 (lower is better)
Translates to: CPWEFTGVFILPNDDEIPSFPSV*IETRSL
Trigger: CAGAGATCTAGTTTCTATCCACACAGACGGGAATGA...AGGTATTTCATCATCATTTGGTAATATGAAAACTCCAGTGAACTCCCAAGGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318522.10
CDS-3UTR CCA 90 bp GTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTAATTTGTGAGATCACCTTTCTATTGTaGGATCGCACCAGTGCATTG +
Preference number: 4 (lower is better)
Translates to: VFVSSIYITPLRYTVICEITFLL*DRTSAL
Trigger: CAATGCACTGGTGCGATCCCACAATAGAAAGGTGAT...CTCACAAATTACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR CCA 90 bp GCAACTGCTGTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTAGTGGGAGTATTAGATTaGATGACACTTTCAGTGGAA +
Preference number: 4 (lower is better)
Translates to: ATAVFVSSIYITPLRYTVVGVLD*MTLSVE
Trigger: TTCCACTGAAAGTGTCATCCAATCTAATACTCCCAC...TACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAACAGCAGTTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR CCA 90 bp TTAATCTTCAAAATTTTCTGCCATGAGACAGGAATGCATGATAGCAATGGCTCACCAGCATTAAATAGCTaGAACGCTTCCTGCGTATTA +
Preference number: 4 (lower is better)
Translates to: LIFKIFCHETGMHDSNGSPALNS*NASCVL
Trigger: TAATACGCAGGAAGCGTTCCAGCTATTTAATGCTGG...TGAGCCATTGCTATCATGCATTCCTGTCTCATGGCAGAAAATTTTGAAGATTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318522.10
3UTR CAA 72 bp TGTGGTTTTCCTTCCATTCACTTGAATCTCAAACATTaGAGAATGTTTAGGCTAGTAAAGGACTCCTTGGAG +
Preference number: 4 (lower is better)
Translates to: CGFPSIHLNLKH*RMFRLVKDSLE
Trigger: CTCCAAGGAGTCCTTTACTAGCCTAAACATTCTCAAATGTTTGAGATTCAAGTGAATGGAAGGAAAACCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318522.10
CDS-3UTR TCA 90 bp GTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTAATTTGTGAGAACACACTGCCATCATaGGCTTTGATTTGTTTGCTG +
Preference number: 4 (lower is better)
Translates to: VFVSSIYITPLRYTVICENTLPS*ALICLL
Trigger: CAGCAAACAAATCAAAGCTCATGATGGCAGTGTGTT...CTCACAAATTACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR TCA 90 bp GTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTAATTTGTGAGCTGATTGTGCCATACTaGTCAGGAACCTCTATTTCT +
Preference number: 4 (lower is better)
Translates to: VFVSSIYITPLRYTVICELIVPY*SGTSIS
Trigger: AGAAATAGAGGTTCCTGATCAGTATGGCACAATCAG...CTCACAAATTACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR TCA 90 bp GTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTAATTTGTGAGCAGACACCAAATACTTaGAATCCTAGCACACAGGTA +
Preference number: 4 (lower is better)
Translates to: VFVSSIYITPLRYTVICEQTPNT*NPSTQV
Trigger: TACCTGTGTGCTAGGATTTCAAGTATTTGGTGTCTG...CTCACAAATTACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR TCA 90 bp GTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTAATTTGTGAGTTGGAGCAGGGATACTaGAACAGATGGACTTTACAA +
Preference number: 4 (lower is better)
Translates to: VFVSSIYITPLRYTVICELEQGY*NRWTLQ
Trigger: TTGTAAAGTCCATCTGTTTCAGTATCCCTGCTCCAA...CTCACAAATTACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR TCA 90 bp TTGAAACTACCACCGAAGAGTATCATGATTATAAATCTCATTGTACATGGCAACATTACACATTTGGGGTaGGAGGGTATCTCAGTAAGA +
Preference number: 4 (lower is better)
Translates to: LKLPPKSIMIINLIVHGNITHLG*EGISVR
Trigger: TCTTACTGAGATACCCTCTCACCCCAAATGTGTAAT...GTTGCCATGTACAATGAGATTTATAATCATGATACTCTTCGGTGGTAGTTTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318522.10
CDS-3UTR GCA 90 bp GCAACTGCTGTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTAACTTGGTTTTCTGTTTaGACCACTTCCATTGGTTAT +
Preference number: 4 (lower is better)
Translates to: ATAVFVSSIYITPLRYTVTWFSV*TTSIGY
Trigger: ATAACCAATGGAAGTGGTGCAAACAGAAAACCAAGT...TACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAACAGCAGTTGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR GCA 90 bp ACAGTGATTCTCCATCACTGCCCATCCTGTTACCTGAACTTTATCACAAAATCAATCTTTATGCTTGTCTaGAGTTTTGGTAACTTTTGG +
Preference number: 4 (lower is better)
Translates to: TVILHHCPSCYLNFITKSIFMLV*SFGNFW
Trigger: CCAAAAGTTACCAAAACTGCAGACAAGCATAAAGAT...TGATTTTGTGATAAAGTTCAGGTAACAGGATGGGCAGTGATGGAGAATCACTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR CCA 90 bp GTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTAATTTGTGAGTTGCACCACTTCCATTaGTTATACAGGACATGGGAA +
Preference number: 4 (lower is better)
Translates to: VFVSSIYITPLRYTVICELHHFH*LYRTWE
Trigger: TTCCCATGTCCTGTATAACCAATGGAAGTGGTGCAA...CTCACAAATTACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR CCA 90 bp TTGAAACTACCACCGAAGAGTATCATGATTATAAATCTCATTGTACATGGCAACAATGAACATGGTAATTaGCCGACCGCGCATAAACAT +
Preference number: 4 (lower is better)
Translates to: LKLPPKSIMIINLIVHGNNEHGN*PTAHKH
Trigger: ATGTTTATGCGCGGTCGGCCAATTACCATGTTCATT...GTTGCCATGTACAATGAGATTTATAATCATGATACTCTTCGGTGGTAGTTTCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318522.10
CDS-3UTR CCA 90 bp ACAGTGATTCTCCATCACTGCCCATCCTGTTACCTGAACTTTATCACAAAATCACCCTGTACTTCTATTTaGAAGCCATCATTAAATGTT +
Preference number: 4 (lower is better)
Translates to: TVILHHCPSCYLNFITKSPCTSI*KPSLNV
Trigger: AACATTTAATGATGGCTTCCAAATAGAAGTACAGGG...TGATTTTGTGATAAAGTTCAGGTAACAGGATGGGCAGTGATGGAGAATCACTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR CCA 90 bp GTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTAATTTGTGAGTCATTCCCGTCTGTGTaGATAGAAACTAGATCTCTG +
Preference number: 4 (lower is better)
Translates to: VFVSSIYITPLRYTVICESFPSV*IETRSL
Trigger: CAGAGATCTAGTTTCTATCCACACAGACGGGAATGA...CTCACAAATTACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR CCA 90 bp TTGAAACTACCACCGAAGAGTATCATGATTATAAATCTCATTGTACATGGCAACTATATACTTGTTGTCTaGGGACCAGTCAAGGTGTGT +
Preference number: 4 (lower is better)
Translates to: LKLPPKSIMIINLIVHGNYILVV*GPVKVC
Trigger: ACACACCTTGACTGGTCCCCAGACAACAAGTATATA...GTTGCCATGTACAATGAGATTTATAATCATGATACTCTTCGGTGGTAGTTTCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318522.10
CDS-3UTR CCA 90 bp TTAATCTTCAAAATTTTCTGCCATGAGACAGGAATGCATGATAGCAATGGCTCAGTGGGAGTATTAGATTaGATGACACTTTCAGTGGAA +
Preference number: 4 (lower is better)
Translates to: LIFKIFCHETGMHDSNGSVGVLD*MTLSVE
Trigger: TTCCACTGAAAGTGTCATCCAATCTAATACTCCCAC...TGAGCCATTGCTATCATGCATTCCTGTCTCATGGCAGAAAATTTTGAAGATTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318522.10
CDS-3UTR CCA 90 bp GTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTAATTTGTGAGTGTTCTCCAGAAGTGTaGGAGAACTGCTTATTCTAC +
Preference number: 4 (lower is better)
Translates to: VFVSSIYITPLRYTVICECSPEV*ENCLFY
Trigger: GTAGAATAAGCAGTTCTCCCACACTTCTGGAGAACA...CTCACAAATTACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR CCA 90 bp GATAGCAATGGCTCAACATCTTCACATGAAACACTTGGATTCATTTTCATTCACCATACTGAAGAAAGATaGGTTGCTTGGAATCTCTCT +
Preference number: 4 (lower is better)
Translates to: DSNGSTSSHETLGFIFIHHTEER*VAWNLS
Trigger: AGAGAGATTCCAAGCAACCCATCTTTCTTCAGTATG...GTGAATGAAAATGAATCCAAGTGTTTCATGTGAAGATGTTGAGCCATTGCTATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318522.10
CDS-3UTR GCA 90 bp GCAACTGCTGTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTAATCTTTATGCTTGTCTaGAGTTTTGGTAACTTTTGG +
Preference number: 4 (lower is better)
Translates to: ATAVFVSSIYITPLRYTVIFMLV*SFGNFW
Trigger: CCAAAAGTTACCAAAACTGCAGACAAGCATAAAGAT...TACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAACAGCAGTTGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR GCA 90 bp TTGAAACTACCACCGAAGAGTATCATGATTATAAATCTCATTGTACATGGCAACCCAAGTCCAATAATCTaGAGTGTGGATAGAGTAACA +
Preference number: 4 (lower is better)
Translates to: LKLPPKSIMIINLIVHGNPSPII*SVDRVT
Trigger: TGTTACTCTATCCACACTGCAGATTATTGGACTTGG...GTTGCCATGTACAATGAGATTTATAATCATGATACTCTTCGGTGGTAGTTTCAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318522.10
CDS-3UTR GCA 90 bp GTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTAATTTGTGAGCCAAGTCCAATAATCTaGAGTGTGGATAGAGTAACA +
Preference number: 4 (lower is better)
Translates to: VFVSSIYITPLRYTVICEPSPII*SVDRVT
Trigger: TGTTACTCTATCCACACTGCAGATTATTGGACTTGG...CTCACAAATTACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR GCA 90 bp GTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTAATTTGTGAGGAAGTGTGGGAGAACTaGTTATTCTACTTTCCTCTT +
Preference number: 4 (lower is better)
Translates to: VFVSSIYITPLRYTVICEEVWEN*LFYFPL
Trigger: AAGAGGAAAGTAGAATAAGCAGTTCTCCCACACTTC...CTCACAAATTACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR GCA 90 bp CCTGCATACTTAAGACTTCTTAACTCATCCAAAGTTTCTAAACATGATTTGACCTGTCAGTATATTTCTTaGAGGGAGTATAGCACATGC +
Preference number: 4 (lower is better)
Translates to: PAYLRLLNSSKVSKHDLTCQYIS*REYSTC
Trigger: GCATGTGCTATACTCCCTGCAAGAAATATACTGACA...GGTCAAATCATGTTTAGAAACTTTGGATGAGTTAAGAAGTCTTAAGTATGCAGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318522.10
CDS-3UTR GCA 90 bp GCAACTGCTGTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTAAGGTACTTAAAGAAATaGTCTTTCTTCTCCAAGAAC +
Preference number: 4 (lower is better)
Translates to: ATAVFVSSIYITPLRYTVRYLKK*SFFSKN
Trigger: GTTCTTGGAGAAGAAAGAGCATTTCTTTAAGTACCT...TACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAACAGCAGTTGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318522.10
CDS-3UTR GCA 90 bp GCAACTGCTGTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTAATCTTCAAAATTTTCTaGCATGAGACAGGAATGCAT +
Preference number: 4 (lower is better)
Translates to: ATAVFVSSIYITPLRYTVIFKIF*HETGMH
Trigger: ATGCATTCCTGTCTCATGGCAGAAAATTTTGAAGAT...TACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAACAGCAGTTGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000318522.10
CDS-3UTR CCA 90 bp GTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTAATTTGTGAGGTGGGAGTATTAGATTaGATGACACTTTCAGTGGAA +
Preference number: 4 (lower is better)
Translates to: VFVSSIYITPLRYTVICEVGVLD*MTLSVE
Trigger: TTCCACTGAAAGTGTCATCCAATCTAATACTCCCAC...CTCACAAATTACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR CCA 90 bp GATAGCAATGGCTCAACATCTTCACATGAAACACTTGGATTCATTTTCATTCACTCCTTGGGAGTTCACTaGAGTTTTCATATTACCAAA +
Preference number: 4 (lower is better)
Translates to: DSNGSTSSHETLGFIFIHSLGVH*SFHITK
Trigger: TTTGGTAATATGAAAACTCCAGTGAACTCCCAAGGA...GTGAATGAAAATGAATCCAAGTGTTTCATGTGAAGATGTTGAGCCATTGCTATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318522.10
CDS-3UTR TCA 90 bp GTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTAATTTGTGAGCTACTACTGATGCAATaGAATAAACTATTTTCCCGG +
Preference number: 4 (lower is better)
Translates to: VFVSSIYITPLRYTVICELLLMQ*NKLFSR
Trigger: CCGGGAAAATAGTTTATTTCATTGCATCAGTAGTAG...CTCACAAATTACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR GCA 90 bp TTAATCTTCAAAATTTTCTGCCATGAGACAGGAATGCATGATAGCAATGGCTCAATCTTTATGCTTGTCTaGAGTTTTGGTAACTTTTGG +
Preference number: 4 (lower is better)
Translates to: LIFKIFCHETGMHDSNGSIFMLV*SFGNFW
Trigger: CCAAAAGTTACCAAAACTGCAGACAAGCATAAAGAT...TGAGCCATTGCTATCATGCATTCCTGTCTCATGGCAGAAAATTTTGAAGATTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000318522.10
CDS-3UTR GCA 90 bp GTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTAATTTGTGAGATGATGACATCTTTATaGTTGTCTGCAGTTTTGGTA +
Preference number: 4 (lower is better)
Translates to: VFVSSIYITPLRYTVICEMMTSL*LSAVLV
Trigger: TACCAAAACTGCAGACAAGCATAAAGATGTCATCAT...CTCACAAATTACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAAC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR CCA 90 bp GTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTAATTTGTGAGCCCTGTACTTCTATTTaGAAGCCATCATTAAATGTT +
Preference number: 4 (lower is better)
Translates to: VFVSSIYITPLRYTVICEPCTSI*KPSLNV
Trigger: AACATTTAATGATGGCTTCCAAATAGAAGTACAGGG...CTCACAAATTACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAAC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR CCA 90 bp CCTGCATACTTAAGACTTCTTAACTCATCCAAAGTTTCTAAACATGATTTGACCAGTTTTAAAGGCATGTaGTTTTCCTTCCATTCACTT +
Preference number: 4 (lower is better)
Translates to: PAYLRLLNSSKVSKHDLTSFKGM*FSFHSL
Trigger: AAGTGAATGGAAGGAAAACCACATGCCTTTAAAACT...GGTCAAATCATGTTTAGAAACTTTGGATGAGTTAAGAAGTCTTAAGTATGCAGG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318522.10
CDS CCA 90 bp CGGCTCGGCTACCGGCTCCCGCCTCCGTCGTCCGTCCGTTCGCCCTaGGGTAGTAAGCCGCGGCCGCCCGAACCACTTCCCCGTCACGTT +
Preference number: 5 (lower is better)
Translates to: RLGYRLPPPSSVRSP*GSKPRPPEPLPRHV
Trigger: AACGTGACGGGGAAGTGGTTCGGGCGGCCGCGGCTTACTACCCCAGGGCGAACGGACGGACGACGGAGGCGGGAGCCGGTAGCCGAGCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318522.10
ENST00000402711.6
ENST00000409040.1
ENST00000482660.1
CDS CCA 90 bp TCCGGGCTTAGAGGGGCGGGCACTTCATTCAGCGGACCGACAGAGTaGCCGACGCTGAGCCTGACCCGCTCGTTCTCTAGGTCGCCCGGC +
Preference number: 5 (lower is better)
Translates to: SGLRGAGTSFSGPTE*PTLSLTRSFSRSPG
Trigger: GCCGGGCGACCTAGAGAACGAGCGGGTCAGGCTCAGCGTCGGCCACTCTGTCGGTCCGCTGAATGAAGTGCCCGCCCCTCTAAGCCCGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
ENST00000409040.1
ENST00000482660.1
CDS CCA 90 bp GGCTCACCAAGGTCTCCGCTGCCCTCTTCACTCTCCTCCTCGCTGTaGTCTTCACTTGGCTCCACAGTTTGTTCCAGGCTGTTCTCCAGA +
Preference number: 5 (lower is better)
Translates to: GSPRSPLPSSLSSSL*SSLGSTVCSRLFSR
Trigger: TCTGGAGAACAGCCTGGAACAAACTGTGGAGCCAAGTGAAGACCACAGCGAGGAGGAGAGTGAAGAGGGCAGCGGAGACCTTGGTGAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
ENST00000406175.3
CDS CCA 90 bp GGTGTTAGGACGAGGGCGAAGGGTCTTGCTGGTCCTCCAGAAGGGTaGCTTTGGCCTGCTCCTTGCTTATCTCGTTGCATGGCTCTTCAT +
Preference number: 5 (lower is better)
Translates to: GVRTRAKGLAGPPEG*LWPAPCLSRCMALH
Trigger: ATGAAGAGCCATGCAACGAGATAAGCAAGGAGCAGGCCAAAGCCACCCTTCTGGAGGACCAGCAAGACCCTTCGCCCTCGTCCTAACACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
ENST00000406175.3
CDS GCA 90 bp TCTCGTTGCATGGCTCTTCATAAAGAGGCTCACCAAGGTCTCCGCTaGCCTCTTCACTCTCCTCCTCGCTGTGGTCTTCACTTGGCTCCA +
Preference number: 5 (lower is better)
Translates to: SRCMALHKEAHQGLR*PLHSPPRCGLHLAP
Trigger: TGGAGCCAAGTGAAGACCACAGCGAGGAGGAGAGTGAAGAGGGCAGCGGAGACCTTGGTGAGCCTCTTTATGAAGAGCCATGCAACGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
ENST00000406175.3
CDS TCA 90 bp TCCTGGTTCATCTACCAGCCTGGTCCATTCCAGCCTGTGTTCCATTaGGTTCCACAGGCACACCTGCCTGTCCTGAGCACATGTCAAGAG +
Preference number: 5 (lower is better)
Translates to: SWFIYQPGPFQPVFH*VPQAHLPVLSTCQE
Trigger: CTCTTGACATGTGCTCAGGACAGGCAGGTGTGCCTGTGGAACTCAATGGAACACAGGCTGGAATGGACCAGGCTGGTAGATGAACCAGGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
ENST00000406175.3
CDS TCA 90 bp CACCTGCCTGAGTGCGTTCCTATGGCCACCACTGTGCCACTTGGATaGAAATCTGCACAGTGTCCTGGTTCATCTACCAGCCTGGTCCAT +
Preference number: 5 (lower is better)
Translates to: HLPECVPMATTVPLG*KSAQCPGSSTSLVH
Trigger: ATGGACCAGGCTGGTAGATGAACCAGGACACTGTGCAGATTTTCATCCAAGTGGCACAGTGGTGGCCATAGGAACGCACTCAGGCAGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
ENST00000406175.3
CDS-3UTR CAA 90 bp AGCTGGAACGCTTCCTGCGTATTAGTAGTGTCTTTTGAAACTACCACCGAAGAGGCGAAACCGTCCATCTaGCGGGGAAAGCGCCGGGCT +
Preference number: 5 (lower is better)
Translates to: SWNASCVLVVSFETTTEEAKPSI*RGKRRA
Trigger: AGCCCGGCGCTTTCCCCGCAAGATGGACGGTTTCGC...CTCTTCGGTGGTAGTTTCAAAAGACACTACTAATACGCAGGAAGCGTTCCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318522.10
CDS GCA 90 bp CCAGAACAAACCACCTGCCTGAGTGCGTTCCTATGGCCACCACTGTaGCACTTGGATGAAAATCTGCACAGTGTCCTGGTTCATCTACCA +
Preference number: 5 (lower is better)
Translates to: PEQTTCLSAFLWPPL*HLDENLHSVLVHLP
Trigger: TGGTAGATGAACCAGGACACTGTGCAGATTTTCATCCAAGTGGCACAGTGGTGGCCATAGGAACGCACTCAGGCAGGTGGTTTGTTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
ENST00000406175.3
CDS-3UTR CAA 90 bp ACAGTGATTCTCCATCACTGCCCATCCTGTTACCTGAACTTTATCACAAAATCACACTTCCCCGTCACGTaGAGAGCCGCGCCGCTCAGC +
Preference number: 5 (lower is better)
Translates to: TVILHHCPSCYLNFITKSHFPVT*RAAPLS
Trigger: GCTGAGCGGCGCGGCTCTCAACGTGACGGGGAAGTG...TGATTTTGTGATAAAGTTCAGGTAACAGGATGGGCAGTGATGGAGAATCACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318522.10
ENST00000402711.6
CDS-3UTR CAA 90 bp ACAGTGATTCTCCATCACTGCCCATCCTGTTACCTGAACTTTATCACAAAATCAGCGAAACCGTCCATCTaGCGGGGAAAGCGCCGGGCT +
Preference number: 5 (lower is better)
Translates to: TVILHHCPSCYLNFITKSAKPSI*RGKRRA
Trigger: AGCCCGGCGCTTTCCCCGCAAGATGGACGGTTTCGC...TGATTTTGTGATAAAGTTCAGGTAACAGGATGGGCAGTGATGGAGAATCACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS GCA 90 bp TCCAGGCATCCTACTCCACGCTCAAAAGTGCCAAGTCCAATAATCTaGAGTGTGGATAGAGTAACAGAATCCCACACTCTGACGTGGGGT +
Preference number: 5 (lower is better)
Translates to: SRHPTPRSKVPSPII*SVDRVTESHTLTWG
Trigger: ACCCCACGTCAGAGTGTGGGATTCTGTTACTCTATCCACACTGCAGATTATTGGACTTGGCACTTTTGAGCGTGGAGTAGGATGCCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
ENST00000406175.3
ENST00000480320.1
CDS-3UTR CAA 90 bp AGCTGGAACGCTTCCTGCGTATTAGTAGTGTCTTTTGAAACTACCACCGAAGAGGCTTTGGCCTGCTCCTaGCTTATCTCGTTGCATGGC +
Preference number: 5 (lower is better)
Translates to: SWNASCVLVVSFETTTEEALACS*LISLHG
Trigger: GCCATGCAACGAGATAAGCAAGGAGCAGGCCAAAGC...CTCTTCGGTGGTAGTTTCAAAAGACACTACTAATACGCAGGAAGCGTTCCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318522.10
CDS TCA 90 bp AACTTTATCACAAAATCACATGCAGCTGAAGGAAAAGAGTTGCACTaGAGCCAGGGTGTTAGGACGAGGGCGAAGGGTCTTGCTGGTCCT +
Preference number: 5 (lower is better)
Translates to: NFITKSHAAEGKELH*SQGVRTRAKGLAGP
Trigger: AGGACCAGCAAGACCCTTCGCCCTCGTCCTAACACCCTGGCTTCAGTGCAACTCTTTTCCTTCAGCTGCATGTGATTTTGTGATAAAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
ENST00000406175.3
CDS GCA 90 bp GTCATCGGCAACAGCTATCACCTTTCTATTGTGGGATCGCACCAGTaGATTGATATCTGTCCCATCAGATCCTTCTGGCCAGACACCAAA +
Preference number: 5 (lower is better)
Translates to: VIGNSYHLSIVGSHQ*IDICPIRSFWPDTK
Trigger: TTTGGTGTCTGGCCAGAAGGATCTGATGGGACAGATATCAATGCACTGGTGCGATCCCACAATAGAAAGGTGATAGCTGTTGCCGATGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
ENST00000406175.3
CDS-3UTR CAA 90 bp GTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTAATTTGTGAGCACTTCCCCGTCACGTaGAGAGCCGCGCCGCTCAGC +
Preference number: 5 (lower is better)
Translates to: VFVSSIYITPLRYTVICEHFPVT*RAAPLS
Trigger: GCTGAGCGGCGCGGCTCTCAACGTGACGGGGAAGTG...CTCACAAATTACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318522.10
ENST00000402711.6
CDS-3UTR CAA 90 bp GCAACTGCTGTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTACGAGGGCGAAGGGTCTaGCTGGTCCTCCAGAAGGGT +
Preference number: 5 (lower is better)
Translates to: ATAVFVSSIYITPLRYTVRGRRV*LVLQKG
Trigger: ACCCTTCTGGAGGACCAGCAAGACCCTTCGCCCTCG...TACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAACAGCAGTTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS TCA 90 bp CGGCAACAGCTATCACCTTTCTATTGTGGGATCGCACCAGTGCATTaGTATCTGTCCCATCAGATCCTTCTGGCCAGACACCAAATACTT +
Preference number: 5 (lower is better)
Translates to: RQQLSPFYCGIAPVH*YLSHQILLARHQIL
Trigger: AAGTATTTGGTGTCTGGCCAGAAGGATCTGATGGGACAGATATCAATGCACTGGTGCGATCCCACAATAGAAAGGTGATAGCTGTTGCCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
ENST00000406175.3
CDS GCA 90 bp GCTCCACAGTTTGTTCCAGGCTGTTCTCCAGAAGTGTGGGAGAACTaGTTATTCTACTTTCCTCTTCAGCTGTCTCATTTAAGGGCTGAG +
Preference number: 5 (lower is better)
Translates to: APQFVPGCSPEVWEN*LFYFPLQLSHLRAE
Trigger: CTCAGCCCTTAAATGAGACAGCTGAAGAGGAAAGTAGAATAAGCAGTTCTCCCACACTTCTGGAGAACAGCCTGGAACAAACTGTGGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
ENST00000406175.3
CDS CCA 90 bp TTGGTGGGAGTAGCATTCTTGCTTTCTGGAGTTTGTCTGTGTATTTaGAGAGGTTGTGAAGAGGGCTGGGGAGAAGGTGATGCTCGAATT +
Preference number: 5 (lower is better)
Translates to: LVGVAFLLSGVCLCI*RGCEEGWGEGDARI
Trigger: AATTCGAGCATCACCTTCTCCCCAGCCCTCTTCACAACCTCTCCAAATACACAGACAAACTCCAGAAAGCAAGAATGCTACTCCCACCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000409040.1
CDS CCA 90 bp ATAATCTGCAGTGTGGATAGAGTAACAGAATCCCACACTCTGACGTaGGGTTGTAGAGGCTGCAAAAACACAAGACAGCAGAGCAACTGG +
Preference number: 5 (lower is better)
Translates to: IICSVDRVTESHTLT*GCRGCKNTRQQSNW
Trigger: CCAGTTGCTCTGCTGTCTTGTGTTTTTGCAGCCTCTACAACCCCACGTCAGAGTGTGGGATTCTGTTACTCTATCCACACTGCAGATTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406175.3
CDS TCA 90 bp TTGCAAGACGCCTCAAAACATCAGCCAAAGCCGCCTTTAGCACAGTaGTTTCATCTTCTTGTTGCTGAACTCGTGACTCAAGAGCTGACA +
Preference number: 5 (lower is better)
Translates to: LQDASKHQPKPPLAQ*FHLLVAELVTQELT
Trigger: TGTCAGCTCTTGAGTCACGAGTTCAGCAACAAGAAGATGAAATCACTGTGCTAAAGGCGGCTTTGGCTGATGTTTTGAGGCGTCTTGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
ENST00000409040.1
ENST00000482660.1
CDS-3UTR CAA 90 bp CCTGCATACTTAAGACTTCTTAACTCATCCAAAGTTTCTAAACATGATTTGACCCGAGGGCGAAGGGTCTaGCTGGTCCTCCAGAAGGGT +
Preference number: 5 (lower is better)
Translates to: PAYLRLLNSSKVSKHDLTRGRRV*LVLQKG
Trigger: ACCCTTCTGGAGGACCAGCAAGACCCTTCGCCCTCG...GGTCAAATCATGTTTAGAAACTTTGGATGAGTTAAGAAGTCTTAAGTATGCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318522.10
CDS-3UTR CAA 90 bp GTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTAATTTGTGAGCGAGGGCGAAGGGTCTaGCTGGTCCTCCAGAAGGGT +
Preference number: 5 (lower is better)
Translates to: VFVSSIYITPLRYTVICERGRRV*LVLQKG
Trigger: ACCCTTCTGGAGGACCAGCAAGACCCTTCGCCCTCG...CTCACAAATTACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS GCA 90 bp CTATCATCTGTCCACCAAAGAAGAGGTGAAATTGAAAGTGTGAGCTaGTATCACGAAGTACGCTCTCGCATACTGATGTCCGACTTTCAG +
Preference number: 5 (lower is better)
Translates to: LSSVHQRRGEIESVS*YHEVRSRILMSDFQ
Trigger: CTGAAAGTCGGACATCAGTATGCGAGAGCGTACTTCGTGATAGCAGCTCACACTTTCAATTTCACCTCTTCTTTGGTGGACAGATGATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482660.1
CDS CCA 90 bp CTTCACTTGGCTCCACAGTTTGTTCCAGGCTGTTCTCCAGAAGTGTaGGAGAACTGCTTATTCTACTTTCCTCTTCAGCTGTCTCATTTA +
Preference number: 5 (lower is better)
Translates to: LHLAPQFVPGCSPEV*ENCLFYFPLQLSHL
Trigger: TAAATGAGACAGCTGAAGAGGAAAGTAGAATAAGCAGTTCTCCCACACTTCTGGAGAACAGCCTGGAACAAACTGTGGAGCCAAGTGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
ENST00000406175.3
CDS-3UTR CAA 90 bp GCTAACAGACAGATATATATGCCTGATACTTACTGGCGCGCTCCGATAAGTATGTGGTATTTGCATCTGTaGGGTGAAACTCCACAGCCA +
Preference number: 5 (lower is better)
Translates to: ANRQIYMPDTYWRAPISMWYLHL*GETPQP
Trigger: TGGCTGTGGAGTTTCACCCAACAGATGCAAATACCA...CATACTTATCGGAGCGCGCCAGTAAGTATCAGGCATATATATCTGTCTGTTAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318522.10
CDS-3UTR CAA 90 bp CTCTTTCTTCTCCAAGAACTGCCTGTTCATGTCAGTATATTTCTTGCAGGGAGTCCACCACTGTGCCACTaGGATGAAAATCTGCACAGT +
Preference number: 5 (lower is better)
Translates to: LFLLQELPVHVSIFLAGSPPLCH*DENLHS
Trigger: ACTGTGCAGATTTTCATCCAAGTGGCACAGTGGTGG...ACTCCCTGCAAGAAATATACTGACATGAACAGGCAGTTCTTGGAGAAGAAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318522.10
CDS-3UTR CAA 90 bp GCTAACAGACAGATATATATGCCTGATACTTACTGGCGCGCTCCGATAAGTATGGATCGCACCAGTGCATaGATATCTGTCCCATCAGAT +
Preference number: 5 (lower is better)
Translates to: ANRQIYMPDTYWRAPISMDRTSA*ISVPSD
Trigger: ATCTGATGGGACAGATATCAATGCACTGGTGCGATC...CATACTTATCGGAGCGCGCCAGTAAGTATCAGGCATATATATCTGTCTGTTAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318522.10
CDS-3UTR CAA 90 bp ACAGTGATTCTCCATCACTGCCCATCCTGTTACCTGAACTTTATCACAAAATCATGTGACTGGGAGCCTTaGCTTTGGAGCAGGGATACT +
Preference number: 5 (lower is better)
Translates to: TVILHHCPSCYLNFITKSCDWEP*LWSRDT
Trigger: AGTATCCCTGCTCCAAAGCAAAGGCTCCCAGTCACA...TGATTTTGTGATAAAGTTCAGGTAACAGGATGGGCAGTGATGGAGAATCACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR CAA 90 bp ACAGTGATTCTCCATCACTGCCCATCCTGTTACCTGAACTTTATCACAAAATCAACTTGGCTCCACAGTTaGTTCCAGGCTGTTCTCCAG +
Preference number: 5 (lower is better)
Translates to: TVILHHCPSCYLNFITKSTWLHS*FQAVLQ
Trigger: CTGGAGAACAGCCTGGAACAAACTGTGGAGCCAAGT...TGATTTTGTGATAAAGTTCAGGTAACAGGATGGGCAGTGATGGAGAATCACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR CAA 90 bp ACAGTGATTCTCCATCACTGCCCATCCTGTTACCTGAACTTTATCACAAAATCACGCTGTGGTCTTCACTaGGCTCCACAGTTTGTTCCA +
Preference number: 5 (lower is better)
Translates to: TVILHHCPSCYLNFITKSRCGLH*APQFVP
Trigger: TGGAACAAACTGTGGAGCCAAGTGAAGACCACAGCG...TGATTTTGTGATAAAGTTCAGGTAACAGGATGGGCAGTGATGGAGAATCACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS TCA 90 bp GAACTGCTTATTCTACTTTCCTCTTCAGCTGTCTCATTTAAGGGCTaGGAAGGAGGCGGTGTGGGAGTATTAGATTGGATGACACTTTCA +
Preference number: 5 (lower is better)
Translates to: ELLILLSSSAVSFKG*EGGGVGVLDWMTLS
Trigger: TGAAAGTGTCATCCAATCTAATACTCCCACACCGCCTCCTTCTCAGCCCTTAAATGAGACAGCTGAAGAGGAAAGTAGAATAAGCAGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
ENST00000406175.3
CDS CCA 90 bp TGGACTTTACAAAAGTCATCGGCAACAGCTATCACCTTTCTATTGTaGGATCGCACCAGTGCATTGATATCTGTCCCATCAGATCCTTCT +
Preference number: 5 (lower is better)
Translates to: WTLQKSSATAITFLL*DRTSALISVPSDPS
Trigger: AGAAGGATCTGATGGGACAGATATCAATGCACTGGTGCGATCCCACAATAGAAAGGTGATAGCTGTTGCCGATGACTTTTGTAAAGTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
ENST00000406175.3
CDS-3UTR CAA 90 bp GCTAACAGACAGATATATATGCCTGATACTTACTGGCGCGCTCCGATAAGTATGCTTGCTTTCTGGAGTTaGTCTGTGTATTTGGAGAGG +
Preference number: 5 (lower is better)
Translates to: ANRQIYMPDTYWRAPISMLAFWS*SVYLER
Trigger: CCTCTCCAAATACACAGACAAACTCCAGAAAGCAAG...CATACTTATCGGAGCGCGCCAGTAAGTATCAGGCATATATATCTGTCTGTTAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318522.10
CDS-3UTR CAA 90 bp CCTCAAATAAACTCCCTGCTGATCACTGAGAGCTGTATTCCCCAGGTACTTAAAGTCAAGAGCAAATCTTaGAAGGGATGTGTGGCAAGA +
Preference number: 5 (lower is better)
Translates to: PQINSLLITESCIPQVLKVKSKS*KGCVAR
Trigger: TCTTGCCACACATCCCTTCAAAGATTTGCTCTTGAC...TTTAAGTACCTGGGGAATACAGCTCTCAGTGATCAGCAGGGAGTTTATTTGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318522.10
CDS-3UTR CAA 90 bp ACAGTGATTCTCCATCACTGCCCATCCTGTTACCTGAACTTTATCACAAAATCACCACCACTGTGCCACTaGGATGAAAATCTGCACAGT +
Preference number: 5 (lower is better)
Translates to: TVILHHCPSCYLNFITKSPPLCH*DENLHS
Trigger: ACTGTGCAGATTTTCATCCAAGTGGCACAGTGGTGG...TGATTTTGTGATAAAGTTCAGGTAACAGGATGGGCAGTGATGGAGAATCACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR CAA 90 bp ACAGTGATTCTCCATCACTGCCCATCCTGTTACCTGAACTTTATCACAAAATCAGCTATCACCTTTCTATaGTGGGATCGCACCAGTGCA +
Preference number: 5 (lower is better)
Translates to: TVILHHCPSCYLNFITKSAITFL*WDRTSA
Trigger: TGCACTGGTGCGATCCCACAATAGAAAGGTGATAGC...TGATTTTGTGATAAAGTTCAGGTAACAGGATGGGCAGTGATGGAGAATCACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR CAA 90 bp GCAACTGCTGTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTAGAAGAGACGGGGGCTTaGGTTAGAGTAGTATCCGCT +
Preference number: 5 (lower is better)
Translates to: ATAVFVSSIYITPLRYTVEETGA*VRVVSA
Trigger: AGCGGATACTACTCTAACCAAAGCCCCCGTCTCTTC...TACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAACAGCAGTTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS CCA 90 bp CTAGGTGAAATGCGGAGTCAATCACTAAGGGATGAAACTGGTGGTTaGGGGCTAGGAAAGATGATTATGTACAGATTTGAACATGGTGAT +
Preference number: 5 (lower is better)
Translates to: LGEMRSQSLRDETGG*GLGKMIMYRFEHGD
Trigger: ATCACCATGTTCAAATCTGTACATAATCATCTTTCCTAGCCCCCAACCACCAGTTTCATCCCTTAGTGATTGACTCCGCATTTCACCTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480320.1
CDS-3UTR CAA 90 bp GATAGCAATGGCTCAACATCTTCACATGAAACACTTGGATTCATTTTCATTCACTATGCCCACTCCAGTTaGAGCTTCTCAGGAGGCAGT +
Preference number: 5 (lower is better)
Translates to: DSNGSTSSHETLGFIFIHYAHSS*SFSGGS
Trigger: ACTGCCTCCTGAGAAGCTCAAACTGGAGTGGGCATA...GTGAATGAAAATGAATCCAAGTGTTTCATGTGAAGATGTTGAGCCATTGCTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318522.10
CDS-3UTR CAA 90 bp ACAGTGATTCTCCATCACTGCCCATCCTGTTACCTGAACTTTATCACAAAATCATTTCTTGTTAGTGAATaGCCGCTCCAGGTCCAGAAG +
Preference number: 5 (lower is better)
Translates to: TVILHHCPSCYLNFITKSFLVSE*PLQVQK
Trigger: CTTCTGGACCTGGAGCGGCAATTCACTAACAAGAAA...TGATTTTGTGATAAAGTTCAGGTAACAGGATGGGCAGTGATGGAGAATCACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR CAA 90 bp TGCCATGAGACAGGAATGCATGATAGCAATGGCTCAACATCTTCACATGAAACACGATTCCTGATTAGTTaGCAGCCATTTGGAATGTCC +
Preference number: 5 (lower is better)
Translates to: CHETGMHDSNGSTSSHETRFLIS*QPFGMS
Trigger: GGACATTCCAAATGGCTGCAAACTAATCAGGAATCG...TGTTTCATGTGAAGATGTTGAGCCATTGCTATCATGCATTCCTGTCTCATGGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318522.10
CDS-3UTR CAA 90 bp ACAGTGATTCTCCATCACTGCCCATCCTGTTACCTGAACTTTATCACAAAATCAGATCGCACCAGTGCATaGATATCTGTCCCATCAGAT +
Preference number: 5 (lower is better)
Translates to: TVILHHCPSCYLNFITKSDRTSA*ISVPSD
Trigger: ATCTGATGGGACAGATATCAATGCACTGGTGCGATC...TGATTTTGTGATAAAGTTCAGGTAACAGGATGGGCAGTGATGGAGAATCACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR CAA 90 bp TTAATCTTCAAAATTTTCTGCCATGAGACAGGAATGCATGATAGCAATGGCTCATGTGACTGGGAGCCTTaGCTTTGGAGCAGGGATACT +
Preference number: 5 (lower is better)
Translates to: LIFKIFCHETGMHDSNGSCDWEP*LWSRDT
Trigger: AGTATCCCTGCTCCAAAGCAAAGGCTCCCAGTCACA...TGAGCCATTGCTATCATGCATTCCTGTCTCATGGCAGAAAATTTTGAAGATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318522.10
CDS-3UTR CAA 90 bp TGTCCTTGGGAGTTCACTGGAGTTTTCATATTACCAAATGATGATGAAATACCTGAAGAGACGGGGGCTTaGGTTAGAGTAGTATCCGCT +
Preference number: 5 (lower is better)
Translates to: CPWEFTGVFILPNDDEIPEETGA*VRVVSA
Trigger: AGCGGATACTACTCTAACCAAAGCCCCCGTCTCTTC...AGGTATTTCATCATCATTTGGTAATATGAAAACTCCAGTGAACTCCCAAGGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318522.10
CDS-3UTR CAA 90 bp GCTAACAGACAGATATATATGCCTGATACTTACTGGCGCGCTCCGATAAGTATGTGTGGGAGTATTAGATaGGATGACACTTTCAGTGGA +
Preference number: 5 (lower is better)
Translates to: ANRQIYMPDTYWRAPISMCGSIR*DDTFSG
Trigger: TCCACTGAAAGTGTCATCCAATCTAATACTCCCACA...CATACTTATCGGAGCGCGCCAGTAAGTATCAGGCATATATATCTGTCTGTTAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318522.10
CDS-3UTR CAA 90 bp TGTCCTTGGGAGTTCACTGGAGTTTTCATATTACCAAATGATGATGAAATACCTACTTGGCTCCACAGTTaGTTCCAGGCTGTTCTCCAG +
Preference number: 5 (lower is better)
Translates to: CPWEFTGVFILPNDDEIPTWLHS*FQAVLQ
Trigger: CTGGAGAACAGCCTGGAACAAACTGTGGAGCCAAGT...AGGTATTTCATCATCATTTGGTAATATGAAAACTCCAGTGAACTCCCAAGGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318522.10
CDS-3UTR CAA 90 bp GATAGCAATGGCTCAACATCTTCACATGAAACACTTGGATTCATTTTCATTCACCGCTGTGGTCTTCACTaGGCTCCACAGTTTGTTCCA +
Preference number: 5 (lower is better)
Translates to: DSNGSTSSHETLGFIFIHRCGLH*APQFVP
Trigger: TGGAACAAACTGTGGAGCCAAGTGAAGACCACAGCG...GTGAATGAAAATGAATCCAAGTGTTTCATGTGAAGATGTTGAGCCATTGCTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318522.10
CDS-3UTR CAA 90 bp GTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTAATTTGTGAGGCTTTGGCCTGCTCCTaGCTTATCTCGTTGCATGGC +
Preference number: 5 (lower is better)
Translates to: VFVSSIYITPLRYTVICEALACS*LISLHG
Trigger: GCCATGCAACGAGATAAGCAAGGAGCAGGCCAAAGC...CTCACAAATTACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR CAA 90 bp CTCTTTCTTCTCCAAGAACTGCCTGTTCATGTCAGTATATTTCTTGCAGGGAGTAAGAAGGCAACACCATaGCACTTGGCAAAACTGAAG +
Preference number: 5 (lower is better)
Translates to: LFLLQELPVHVSIFLAGSKKATP*HLAKLK
Trigger: CTTCAGTTTTGCCAAGTGCAATGGTGTTGCCTTCTT...ACTCCCTGCAAGAAATATACTGACATGAACAGGCAGTTCTTGGAGAAGAAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318522.10
CDS TCA 90 bp GCAGATGAAAGAGTTTCTTTTCCTGCAATTGAGACAGCACTGGTATaGCTTGGTTTTCTGTTTGCACCACTTCCATTGGTTATACAGGAC +
Preference number: 5 (lower is better)
Translates to: ADERVSFPAIETALV*LGFLFAPLPLVIQD
Trigger: GTCCTGTATAACCAATGGAAGTGGTGCAAACAGAAAACCAAGTCATACCAGTGCTGTCTCAATTGCAGGAAAAGAAACTCTTTCATCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
ENST00000409040.1
CDS-3UTR CAA 90 bp GCAACTGCTGTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTACAGCACTGGTATGACTaGGTTTTCTGTTTGCACCAC +
Preference number: 5 (lower is better)
Translates to: ATAVFVSSIYITPLRYTVQHWYD*VFCLHH
Trigger: GTGGTGCAAACAGAAAACCAAGTCATACCAGTGCTG...TACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAACAGCAGTTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR CAA 90 bp TGCCATGAGACAGGAATGCATGATAGCAATGGCTCAACATCTTCACATGAAACATTTCTTTTCCTGCAATaGAGACAGCACTGGTATGAC +
Preference number: 5 (lower is better)
Translates to: CHETGMHDSNGSTSSHETFLFLQ*RQHWYD
Trigger: GTCATACCAGTGCTGTCTCAATTGCAGGAAAAGAAA...TGTTTCATGTGAAGATGTTGAGCCATTGCTATCATGCATTCCTGTCTCATGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318522.10
CDS-3UTR CAA 90 bp ACAGTGATTCTCCATCACTGCCCATCCTGTTACCTGAACTTTATCACAAAATCACTTGCTTTCTGGAGTTaGTCTGTGTATTTGGAGAGG +
Preference number: 5 (lower is better)
Translates to: TVILHHCPSCYLNFITKSLAFWS*SVYLER
Trigger: CCTCTCCAAATACACAGACAAACTCCAGAAAGCAAG...TGATTTTGTGATAAAGTTCAGGTAACAGGATGGGCAGTGATGGAGAATCACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318522.10
ENST00000401738.3
CDS-3UTR CAA 90 bp GTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTAATTTGTGAGTATGCCCACTCCAGTTaGAGCTTCTCAGGAGGCAGT +
Preference number: 5 (lower is better)
Translates to: VFVSSIYITPLRYTVICEYAHSS*SFSGGS
Trigger: ACTGCCTCCTGAGAAGCTCAAACTGGAGTGGGCATA...CTCACAAATTACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR CAA 90 bp GCAACTGCTGTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTATTTCTTGTTAGTGAATaGCCGCTCCAGGTCCAGAAG +
Preference number: 5 (lower is better)
Translates to: ATAVFVSSIYITPLRYTVFLVSE*PLQVQK
Trigger: CTTCTGGACCTGGAGCGGCAATTCACTAACAAGAAA...TACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAACAGCAGTTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR CAA 90 bp GCAACTGCTGTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTAGGAAGGTACCATCTATaGAGTAGCGCATCACAGAGA +
Preference number: 5 (lower is better)
Translates to: ATAVFVSSIYITPLRYTVGRYHL*SSASQR
Trigger: TCTCTGTGATGCGCTACTCAATAGATGGTACCTTCC...TACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAACAGCAGTTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR CAA 90 bp ACAGTGATTCTCCATCACTGCCCATCCTGTTACCTGAACTTTATCACAAAATCAGACATTATATACTTGTaGTCTGGGGACCAGTCAAGG +
Preference number: 5 (lower is better)
Translates to: TVILHHCPSCYLNFITKSDIIYL*SGDQSR
Trigger: CCTTGACTGGTCCCCAGACAACAAGTATATAATGTC...TGATTTTGTGATAAAGTTCAGGTAACAGGATGGGCAGTGATGGAGAATCACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR CAA 90 bp CCTCAAATAAACTCCCTGCTGATCACTGAGAGCTGTATTCCCCAGGTACTTAAATTAGACATTATATACTaGTTGTCTGGGGACCAGTCA +
Preference number: 5 (lower is better)
Translates to: PQINSLLITESCIPQVLKLDIIY*LSGDQS
Trigger: TGACTGGTCCCCAGACAACAAGTATATAATGTCTAA...TTTAAGTACCTGGGGAATACAGCTCTCAGTGATCAGCAGGGAGTTTATTTGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318522.10
CDS-3UTR CAA 90 bp ACAGTGATTCTCCATCACTGCCCATCCTGTTACCTGAACTTTATCACAAAATCACGATTCCTGATTAGTTaGCAGCCATTTGGAATGTCC +
Preference number: 5 (lower is better)
Translates to: TVILHHCPSCYLNFITKSRFLIS*QPFGMS
Trigger: GGACATTCCAAATGGCTGCAAACTAATCAGGAATCG...TGATTTTGTGATAAAGTTCAGGTAACAGGATGGGCAGTGATGGAGAATCACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR CAA 90 bp AAAAATACCTTTCCAATGCATAATACATGCATTGCCCAAAAGAGTAGGATAGCCGCTATCACCTTTCTATaGTGGGATCGCACCAGTGCA +
Preference number: 5 (lower is better)
Translates to: KNTFPMHNTCIAQKSRIAAITFL*WDRTSA
Trigger: TGCACTGGTGCGATCCCACAATAGAAAGGTGATAGC...GGCTATCCTACTCTTTTGGGCAATGCATGTATTATGCATTGGAAAGGTATTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318522.10
CDS-3UTR CAA 90 bp GTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTAATTTGTGAGGAAGAGACGGGGGCTTaGGTTAGAGTAGTATCCGCT +
Preference number: 5 (lower is better)
Translates to: VFVSSIYITPLRYTVICEEETGA*VRVVSA
Trigger: AGCGGATACTACTCTAACCAAAGCCCCCGTCTCTTC...CTCACAAATTACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR CAA 90 bp GTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTAATTTGTGAGACTTGGCTCCACAGTTaGTTCCAGGCTGTTCTCCAG +
Preference number: 5 (lower is better)
Translates to: VFVSSIYITPLRYTVICETWLHS*FQAVLQ
Trigger: CTGGAGAACAGCCTGGAACAAACTGTGGAGCCAAGT...CTCACAAATTACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR CAA 90 bp GTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTAATTTGTGAGCGCTGTGGTCTTCACTaGGCTCCACAGTTTGTTCCA +
Preference number: 5 (lower is better)
Translates to: VFVSSIYITPLRYTVICERCGLH*APQFVP
Trigger: TGGAACAAACTGTGGAGCCAAGTGAAGACCACAGCG...CTCACAAATTACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR CAA 90 bp ACAGTGATTCTCCATCACTGCCCATCCTGTTACCTGAACTTTATCACAAAATCAAAGAAGGCAACACCATaGCACTTGGCAAAACTGAAG +
Preference number: 5 (lower is better)
Translates to: TVILHHCPSCYLNFITKSKKATP*HLAKLK
Trigger: CTTCAGTTTTGCCAAGTGCAATGGTGTTGCCTTCTT...TGATTTTGTGATAAAGTTCAGGTAACAGGATGGGCAGTGATGGAGAATCACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318522.10
ENST00000401738.3
CDS-3UTR CAA 90 bp ACAGTGATTCTCCATCACTGCCCATCCTGTTACCTGAACTTTATCACAAAATCACATGATCTTCAGAGATaGCAAGACGCCTCAAAACAT +
Preference number: 5 (lower is better)
Translates to: TVILHHCPSCYLNFITKSHDLQR*QDASKH
Trigger: ATGTTTTGAGGCGTCTTGCAATCTCTGAAGATCATG...TGATTTTGTGATAAAGTTCAGGTAACAGGATGGGCAGTGATGGAGAATCACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR CAA 90 bp GCAACTGCTGTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTATTTGCACCACTTCCATaGGTTATACAGGACATGGGA +
Preference number: 5 (lower is better)
Translates to: ATAVFVSSIYITPLRYTVFAPLP*VIQDMG
Trigger: TCCCATGTCCTGTATAACCAATGGAAGTGGTGCAAA...TACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAACAGCAGTTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR CAA 90 bp ACAGTGATTCTCCATCACTGCCCATCCTGTTACCTGAACTTTATCACAAAATCATTTCTTTTCCTGCAATaGAGACAGCACTGGTATGAC +
Preference number: 5 (lower is better)
Translates to: TVILHHCPSCYLNFITKSFLFLQ*RQHWYD
Trigger: GTCATACCAGTGCTGTCTCAATTGCAGGAAAAGAAA...TGATTTTGTGATAAAGTTCAGGTAACAGGATGGGCAGTGATGGAGAATCACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR CAA 90 bp GCAACTGCTGTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTAGGTCGTTTTATGCTTTaGGTGGGAGTAGCATTCTTG +
Preference number: 5 (lower is better)
Translates to: ATAVFVSSIYITPLRYTVGRFML*VGVAFL
Trigger: CAAGAATGCTACTCCCACCAAAAGCATAAAACGACC...TACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAACAGCAGTTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318522.10
ENST00000401738.3
CDS-3UTR CAA 90 bp TGCCATGAGACAGGAATGCATGATAGCAATGGCTCAACATCTTCACATGAAACAGTTGCAATCCTAATTTaGTCAGGATGTATAGCAAGG +
Preference number: 5 (lower is better)
Translates to: CHETGMHDSNGSTSSHETVAILI*SGCIAR
Trigger: CCTTGCTATACATCCTGACAAAATTAGGATTGCAAC...TGTTTCATGTGAAGATGTTGAGCCATTGCTATCATGCATTCCTGTCTCATGGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318522.10
CDS-3UTR CAA 90 bp ACAGTGATTCTCCATCACTGCCCATCCTGTTACCTGAACTTTATCACAAAATCAAAATTCCCTGTTTTCTaGTTAGTGAATTGCCGCTCC +
Preference number: 5 (lower is better)
Translates to: TVILHHCPSCYLNFITKSKFPVF*LVNCRS
Trigger: GGAGCGGCAATTCACTAACAAGAAAACAGGGAATTT...TGATTTTGTGATAAAGTTCAGGTAACAGGATGGGCAGTGATGGAGAATCACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR CAA 90 bp GCAACTGCTGTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTAGTCAAGAGCAAATCTTaGAAGGGATGTGTGGCAAGA +
Preference number: 5 (lower is better)
Translates to: ATAVFVSSIYITPLRYTVVKSKS*KGCVAR
Trigger: TCTTGCCACACATCCCTTCAAAGATTTGCTCTTGAC...TACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAACAGCAGTTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR CAA 90 bp TGTCCTTGGGAGTTCACTGGAGTTTTCATATTACCAAATGATGATGAAATACCTGGAAGGTACCATCTATaGAGTAGCGCATCACAGAGA +
Preference number: 5 (lower is better)
Translates to: CPWEFTGVFILPNDDEIPGRYHL*SSASQR
Trigger: TCTCTGTGATGCGCTACTCAATAGATGGTACCTTCC...AGGTATTTCATCATCATTTGGTAATATGAAAACTCCAGTGAACTCCCAAGGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318522.10
CDS-3UTR CAA 90 bp ACAGTGATTCTCCATCACTGCCCATCCTGTTACCTGAACTTTATCACAAAATCATGTGGGAGTATTAGATaGGATGACACTTTCAGTGGA +
Preference number: 5 (lower is better)
Translates to: TVILHHCPSCYLNFITKSCGSIR*DDTFSG
Trigger: TCCACTGAAAGTGTCATCCAATCTAATACTCCCACA...TGATTTTGTGATAAAGTTCAGGTAACAGGATGGGCAGTGATGGAGAATCACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR CAA 90 bp ACAGTGATTCTCCATCACTGCCCATCCTGTTACCTGAACTTTATCACAAAATCAGCAACACCATTGCACTaGGCAAAACTGAAGTTTTTC +
Preference number: 5 (lower is better)
Translates to: TVILHHCPSCYLNFITKSATPLH*AKLKFF
Trigger: GAAAAACTTCAGTTTTGCCAAGTGCAATGGTGTTGC...TGATTTTGTGATAAAGTTCAGGTAACAGGATGGGCAGTGATGGAGAATCACTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000318522.10
ENST00000401738.3
CDS TCA 90 bp ATGGGAGCAGCATATAGTATCAGTGGAGCATGTGGAATAAAACTCTaGAGAACACCAACATTTAAAGTCCTGGAAAGGAGATCGAGAAAT +
Preference number: 5 (lower is better)
Translates to: MGAAYSISGACGIKL*RTPTFKVLERRSRN
Trigger: ATTTCTCGATCTCCTTTCCAGGACTTTAAATGTTGGTGTTCTTCAGAGTTTTATTCCACATGCTCCACTGATACTATATGCTGCTCCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480320.1
CDS CCA 90 bp GATGTCATCATAGTTGTCAACATCGGAAGGAATGAACATGGTAATTaGCCGACCGCGCATAAACATTTTAATATATTCTCCTTCTTGGCT +
Preference number: 5 (lower is better)
Translates to: DVIIVVNIGRNEHGN*PTAHKHFNIFSFLA
Trigger: AGCCAAGAAGGAGAATATATTAAAATGTTTATGCGCGGTCGGCCAATTACCATGTTCATTCCTTCCGATGTTGACAACTATGATGACATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401738.3
CDS-3UTR CAA 90 bp GCAACTGCTGTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTACATGATCTTCAGAGATaGCAAGACGCCTCAAAACAT +
Preference number: 5 (lower is better)
Translates to: ATAVFVSSIYITPLRYTVHDLQR*QDASKH
Trigger: ATGTTTTGAGGCGTCTTGCAATCTCTGAAGATCATG...TACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAACAGCAGTTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR CAA 90 bp GTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTAATTTGTGAGGTGGGAGTAGCATTCTaGCTTTCTGGAGTTTGTCTG +
Preference number: 5 (lower is better)
Translates to: VFVSSIYITPLRYTVICEVGVAF*LSGVCL
Trigger: CAGACAAACTCCAGAAAGCAAGAATGCTACTCCCAC...CTCACAAATTACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318522.10
ENST00000401738.3
CDS-3UTR CAA 90 bp GATAGCAATGGCTCAACATCTTCACATGAAACACTTGGATTCATTTTCATTCACGGTCGTTTTATGCTTTaGGTGGGAGTAGCATTCTTG +
Preference number: 5 (lower is better)
Translates to: DSNGSTSSHETLGFIFIHGRFML*VGVAFL
Trigger: CAAGAATGCTACTCCCACCAAAAGCATAAAACGACC...GTGAATGAAAATGAATCCAAGTGTTTCATGTGAAGATGTTGAGCCATTGCTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318522.10
CDS-3UTR CAA 90 bp GTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTAATTTGTGAGTGGTATTTGCATCTGTaGGGTGAAACTCCACAGCCA +
Preference number: 5 (lower is better)
Translates to: VFVSSIYITPLRYTVICEWYLHL*GETPQP
Trigger: TGGCTGTGGAGTTTCACCCAACAGATGCAAATACCA...CTCACAAATTACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR CAA 90 bp TGCCATGAGACAGGAATGCATGATAGCAATGGCTCAACATCTTCACATGAAACAGATTTGTTTGCTGATTaGATATACACCTTTAGGTCC +
Preference number: 5 (lower is better)
Translates to: CHETGMHDSNGSTSSHETDLFAD*IYTFRS
Trigger: GGACCTAAAGGTGTATATCAAATCAGCAAACAAATC...TGTTTCATGTGAAGATGTTGAGCCATTGCTATCATGCATTCCTGTCTCATGGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318522.10
CDS-3UTR CAA 90 bp GTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTAATTTGTGAGGGAAGGTACCATCTATaGAGTAGCGCATCACAGAGA +
Preference number: 5 (lower is better)
Translates to: VFVSSIYITPLRYTVICEGRYHL*SSASQR
Trigger: TCTCTGTGATGCGCTACTCAATAGATGGTACCTTCC...CTCACAAATTACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR CAA 90 bp TTAATCTTCAAAATTTTCTGCCATGAGACAGGAATGCATGATAGCAATGGCTCAGACATTATATACTTGTaGTCTGGGGACCAGTCAAGG +
Preference number: 5 (lower is better)
Translates to: LIFKIFCHETGMHDSNGSDIIYL*SGDQSR
Trigger: CCTTGACTGGTCCCCAGACAACAAGTATATAATGTC...TGAGCCATTGCTATCATGCATTCCTGTCTCATGGCAGAAAATTTTGAAGATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000318522.10
CDS-3UTR CAA 90 bp ACAGTGATTCTCCATCACTGCCCATCCTGTTACCTGAACTTTATCACAAAATCATTAGACATTATATACTaGTTGTCTGGGGACCAGTCA +
Preference number: 5 (lower is better)
Translates to: TVILHHCPSCYLNFITKSLDIIY*LSGDQS
Trigger: TGACTGGTCCCCAGACAACAAGTATATAATGTCTAA...TGATTTTGTGATAAAGTTCAGGTAACAGGATGGGCAGTGATGGAGAATCACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR CAA 90 bp GTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTAATTTGTGAGGATCGCACCAGTGCATaGATATCTGTCCCATCAGAT +
Preference number: 5 (lower is better)
Translates to: VFVSSIYITPLRYTVICEDRTSA*ISVPSD
Trigger: ATCTGATGGGACAGATATCAATGCACTGGTGCGATC...CTCACAAATTACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR CAA 90 bp GCAACTGCTGTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTATGTCTTTTCCACCAGTaGATATCAGGTGACTGTCAT +
Preference number: 5 (lower is better)
Translates to: ATAVFVSSIYITPLRYTVCLFHQ*ISGDCH
Trigger: ATGACAGTCACCTGATATCAACTGGTGGAAAAGACA...TACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAACAGCAGTTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR CAA 90 bp GCAACTGCTGTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTATGTGGGAGTATTAGATaGGATGACACTTTCAGTGGA +
Preference number: 5 (lower is better)
Translates to: ATAVFVSSIYITPLRYTVCGSIR*DDTFSG
Trigger: TCCACTGAAAGTGTCATCCAATCTAATACTCCCACA...TACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAACAGCAGTTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS TCA 90 bp AGGTATATGTCGTCCAATCAATGTCCTTACAATCCGATCGATTCCTaGTTAGTTTGCAGCCATTTGGAATGTCCCAGTACAATATTTCAT +
Preference number: 5 (lower is better)
Translates to: RYMSSNQCPYNPIDS*LVCSHLECPSTIFH
Trigger: ATGAAATATTGTACTGGGACATTCCAAATGGCTGCAAACTAATCAGGAATCGATCGGATTGTAAGGACATTGATTGGACGACATATACCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
ENST00000406175.3
CDS CCA 90 bp GATGTCATCATAGTTGTCAACATCGGAAGGAATGAACATGGTAATTaGCCGACCGCGCATAAACATTTTAATATATTCTCCTTCTTGGTT +
Preference number: 5 (lower is better)
Translates to: DVIIVVNIGRNEHGN*PTAHKHFNIFSFLV
Trigger: AACCAAGAAGGAGAATATATTAAAATGTTTATGCGCGGTCGGCCAATTACCATGTTCATTCCTTCCGATGTTGACAACTATGATGACATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318522.10
ENST00000402711.6
CDS-3UTR CAA 90 bp GTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTAATTTGTGAGTTTGCACCACTTCCATaGGTTATACAGGACATGGGA +
Preference number: 5 (lower is better)
Translates to: VFVSSIYITPLRYTVICEFAPLP*VIQDMG
Trigger: TCCCATGTCCTGTATAACCAATGGAAGTGGTGCAAA...CTCACAAATTACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR CAA 90 bp ACAGTGATTCTCCATCACTGCCCATCCTGTTACCTGAACTTTATCACAAAATCAATGACATCTTTATGCTaGTCTGCAGTTTTGGTAACT +
Preference number: 5 (lower is better)
Translates to: TVILHHCPSCYLNFITKSMTSLC*SAVLVT
Trigger: AGTTACCAAAACTGCAGACAAGCATAAAGATGTCAT...TGATTTTGTGATAAAGTTCAGGTAACAGGATGGGCAGTGATGGAGAATCACTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR CAA 90 bp GCAACTGCTGTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTAGTTGCAATCCTAATTTaGTCAGGATGTATAGCAAGG +
Preference number: 5 (lower is better)
Translates to: ATAVFVSSIYITPLRYTVVAILI*SGCIAR
Trigger: CCTTGCTATACATCCTGACAAAATTAGGATTGCAAC...TACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAACAGCAGTTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR CAA 90 bp TTAATCTTCAAAATTTTCTGCCATGAGACAGGAATGCATGATAGCAATGGCTCAAAATTCCCTGTTTTCTaGTTAGTGAATTGCCGCTCC +
Preference number: 5 (lower is better)
Translates to: LIFKIFCHETGMHDSNGSKFPVF*LVNCRS
Trigger: GGAGCGGCAATTCACTAACAAGAAAACAGGGAATTT...TGAGCCATTGCTATCATGCATTCCTGTCTCATGGCAGAAAATTTTGAAGATTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000318522.10
CDS-3UTR CAA 90 bp GTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTAATTTGTGAGGTCAAGAGCAAATCTTaGAAGGGATGTGTGGCAAGA +
Preference number: 5 (lower is better)
Translates to: VFVSSIYITPLRYTVICEVKSKS*KGCVAR
Trigger: TCTTGCCACACATCCCTTCAAAGATTTGCTCTTGAC...CTCACAAATTACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR CAA 90 bp GTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTAATTTGTGAGGACATTATATACTTGTaGTCTGGGGACCAGTCAAGG +
Preference number: 5 (lower is better)
Translates to: VFVSSIYITPLRYTVICEDIIYL*SGDQSR
Trigger: CCTTGACTGGTCCCCAGACAACAAGTATATAATGTC...CTCACAAATTACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR CAA 90 bp GCAACTGCTGTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTATTAGACATTATATACTaGTTGTCTGGGGACCAGTCA +
Preference number: 5 (lower is better)
Translates to: ATAVFVSSIYITPLRYTVLDIIY*LSGDQS
Trigger: TGACTGGTCCCCAGACAACAAGTATATAATGTCTAA...TACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAACAGCAGTTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR CAA 90 bp GCAACTGCTGTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTATTAGTTTGCAGCCATTaGGAATGTCCCAGTACAATA +
Preference number: 5 (lower is better)
Translates to: ATAVFVSSIYITPLRYTVLVCSH*ECPSTI
Trigger: TATTGTACTGGGACATTCCAAATGGCTGCAAACTAA...TACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAACAGCAGTTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR CAA 90 bp GTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTAATTTGTGAGCGATTCCTGATTAGTTaGCAGCCATTTGGAATGTCC +
Preference number: 5 (lower is better)
Translates to: VFVSSIYITPLRYTVICERFLIS*QPFGMS
Trigger: GGACATTCCAAATGGCTGCAAACTAATCAGGAATCG...CTCACAAATTACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR CAA 90 bp GATAGCAATGGCTCAACATCTTCACATGAAACACTTGGATTCATTTTCATTCACTGTCTTTTCCACCAGTaGATATCAGGTGACTGTCAT +
Preference number: 5 (lower is better)
Translates to: DSNGSTSSHETLGFIFIHCLFHQ*ISGDCH
Trigger: ATGACAGTCACCTGATATCAACTGGTGGAAAAGACA...GTGAATGAAAATGAATCCAAGTGTTTCATGTGAAGATGTTGAGCCATTGCTATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318522.10
CDS-3UTR CAA 90 bp TGTCCTTGGGAGTTCACTGGAGTTTTCATATTACCAAATGATGATGAAATACCTGCAACACCATTGCACTaGGCAAAACTGAAGTTTTTC +
Preference number: 5 (lower is better)
Translates to: CPWEFTGVFILPNDDEIPATPLH*AKLKFF
Trigger: GAAAAACTTCAGTTTTGCCAAGTGCAATGGTGTTGC...AGGTATTTCATCATCATTTGGTAATATGAAAACTCCAGTGAACTCCCAAGGACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000318522.10
CDS-3UTR CAA 90 bp TTGAAACTACCACCGAAGAGTATCATGATTATAAATCTCATTGTACATGGCAACCATGATCTTCAGAGATaGCAAGACGCCTCAAAACAT +
Preference number: 5 (lower is better)
Translates to: LKLPPKSIMIINLIVHGNHDLQR*QDASKH
Trigger: ATGTTTTGAGGCGTCTTGCAATCTCTGAAGATCATG...GTTGCCATGTACAATGAGATTTATAATCATGATACTCTTCGGTGGTAGTTTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318522.10
CDS-3UTR CAA 90 bp GTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTAATTTGTGAGTTTCTTTTCCTGCAATaGAGACAGCACTGGTATGAC +
Preference number: 5 (lower is better)
Translates to: VFVSSIYITPLRYTVICEFLFLQ*RQHWYD
Trigger: GTCATACCAGTGCTGTCTCAATTGCAGGAAAAGAAA...CTCACAAATTACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR CAA 90 bp GCAACTGCTGTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTAGATTTGTTTGCTGATTaGATATACACCTTTAGGTCC +
Preference number: 5 (lower is better)
Translates to: ATAVFVSSIYITPLRYTVDLFAD*IYTFRS
Trigger: GGACCTAAAGGTGTATATCAAATCAGCAAACAAATC...TACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAACAGCAGTTGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR CAA 90 bp TTAATCTTCAAAATTTTCTGCCATGAGACAGGAATGCATGATAGCAATGGCTCATTAGTTTGCAGCCATTaGGAATGTCCCAGTACAATA +
Preference number: 5 (lower is better)
Translates to: LIFKIFCHETGMHDSNGSLVCSH*ECPSTI
Trigger: TATTGTACTGGGACATTCCAAATGGCTGCAAACTAA...TGAGCCATTGCTATCATGCATTCCTGTCTCATGGCAGAAAATTTTGAAGATTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318522.10
CDS-3UTR CAA 90 bp GTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTAATTTGTGAGTGTCTTTTCCACCAGTaGATATCAGGTGACTGTCAT +
Preference number: 5 (lower is better)
Translates to: VFVSSIYITPLRYTVICECLFHQ*ISGDCH
Trigger: ATGACAGTCACCTGATATCAACTGGTGGAAAAGACA...CTCACAAATTACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR CAA 90 bp TTAATCTTCAAAATTTTCTGCCATGAGACAGGAATGCATGATAGCAATGGCTCAGAACATCAGAAGTACTaGCAGCAGAAATACTATCAT +
Preference number: 5 (lower is better)
Translates to: LIFKIFCHETGMHDSNGSEHQKY*QQKYYH
Trigger: ATGATAGTATTTCTGCTGCAAGTACTTCTGATGTTC...TGAGCCATTGCTATCATGCATTCCTGTCTCATGGCAGAAAATTTTGAAGATTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318522.10
CDS-3UTR CAA 90 bp CCTGCATACTTAAGACTTCTTAACTCATCCAAAGTTTCTAAACATGATTTGACCATGACATCTTTATGCTaGTCTGCAGTTTTGGTAACT +
Preference number: 5 (lower is better)
Translates to: PAYLRLLNSSKVSKHDLTMTSLC*SAVLVT
Trigger: AGTTACCAAAACTGCAGACAAGCATAAAGATGTCAT...GGTCAAATCATGTTTAGAAACTTTGGATGAGTTAAGAAGTCTTAAGTATGCAGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318522.10
CDS-3UTR CAA 90 bp GTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTAATTTGTGAGATGACATCTTTATGCTaGTCTGCAGTTTTGGTAACT +
Preference number: 5 (lower is better)
Translates to: VFVSSIYITPLRYTVICEMTSLC*SAVLVT
Trigger: AGTTACCAAAACTGCAGACAAGCATAAAGATGTCAT...CTCACAAATTACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS-3UTR CAA 90 bp GTTTTTGTTTCCAGTATTTACATCACACCACTTAGGTACACAGTAATTTGTGAGGGAATCTCTCTTCTTTaGAAGAGAACTATTTTGAGG +
Preference number: 5 (lower is better)
Translates to: VFVSSIYITPLRYTVICEGISLL*KRTILR
Trigger: CCTCAAAATAGTTCTCTTCAAAAGAAGAGAGATTCC...CTCACAAATTACTGTGTACCTAAGTGGTGTGATGTAAATACTGGAAACAAAAAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318522.10
CDS CCA 72 bp TACCGGCTCCCGCCTCCGTCGTCCGTCCGTTCGCCCTaGGGTAGTAAGCCGCGGCCGCCCGAACCACTTCCC +
Preference number: 6 (lower is better)
Translates to: YRLPPPSSVRSP*GSKPRPPEPLP
Trigger: GGGAAGTGGTTCGGGCGGCCGCGGCTTACTACCCCAGGGCGAACGGACGGACGACGGAGGCGGGAGCCGGTA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318522.10
ENST00000402711.6
ENST00000409040.1
ENST00000482660.1
CDS CCA 72 bp AGAGGGGCGGGCACTTCATTCAGCGGACCGACAGAGTaGCCGACGCTGAGCCTGACCCGCTCGTTCTCTAGG +
Preference number: 6 (lower is better)
Translates to: RGAGTSFSGPTE*PTLSLTRSFSR
Trigger: CCTAGAGAACGAGCGGGTCAGGCTCAGCGTCGGCCACTCTGTCGGTCCGCTGAATGAAGTGCCCGCCCCTCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
ENST00000409040.1
ENST00000482660.1
CDS CAA 72 bp CCAATCTTCACGAGACTGCCGGCGAAACCGTCCATCTaGCGGGGAAAGCGCCGGGCTCCGGGCTTAGAGGGG +
Preference number: 6 (lower is better)
Translates to: PIFTRLPAKPSI*RGKRRAPGLEG
Trigger: CCCCTCTAAGCCCGGAGCCCGGCGCTTTCCCCGCAAGATGGACGGTTTCGCCGGCAGTCTCGTGAAGATTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482660.1
CDS CAA 90 bp GCAGCAGAAATACTATCATCGAGACTGCCGGCGAAACCGTCCATCTaGCGGGGAAAGCGCCGGGCTCCGGGCTTAGAGGGGCGGGCACTT +
Preference number: 6 (lower is better)
Translates to: AAEILSSRLPAKPSI*RGKRRAPGLEGRAL
Trigger: AAGTGCCCGCCCCTCTAAGCCCGGAGCCCGGCGCTTTCCCCGCAAGATGGACGGTTTCGCCGGCAGTCTCGATGATAGTATTTCTGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
ENST00000409040.1
CDS CAA 72 bp ATACTATCATCGAGACTGCCGGCGAAACCGTCCATCTaGCGGGGAAAGCGCCGGGCTCCGGGCTTAGAGGGG +
Preference number: 6 (lower is better)
Translates to: ILSSRLPAKPSI*RGKRRAPGLEG
Trigger: CCCCTCTAAGCCCGGAGCCCGGCGCTTTCCCCGCAAGATGGACGGTTTCGCCGGCAGTCTCGATGATAGTAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
ENST00000409040.1
CDS CAA 90 bp TCTCAATTACCAATCTTCACGAGACTGCCGGCGAAACCGTCCATCTaGCGGGGAAAGCGCCGGGCTCCGGGCTTAGAGGGGCGGGCACTT +
Preference number: 6 (lower is better)
Translates to: SQLPIFTRLPAKPSI*RGKRRAPGLEGRAL
Trigger: AAGTGCCCGCCCCTCTAAGCCCGGAGCCCGGCGCTTTCCCCGCAAGATGGACGGTTTCGCCGGCAGTCTCGTGAAGATTGGTAATTGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482660.1
CDS CAA 72 bp ACTGAAGCCAGGGTGTTAGGACGAGGGCGAAGGGTCTaGCTGGTCCTCCAGAAGGGTGGCTTTGGCCTGCTC +
Preference number: 6 (lower is better)
Translates to: TEARVLGRGRRV*LVLQKGGFGLL
Trigger: GAGCAGGCCAAAGCCACCCTTCTGGAGGACCAGCAAGACCCTTCGCCCTCGTCCTAACACCCTGGCTTCAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
ENST00000406175.3
CDS CAA 90 bp GGTCTCCGCTGCCCTCTTCACTCTCCTCCTCGCTGTGGTCTTCACTaGGCTCCACAGTTTGTTCCAGGCTGTTCTCCAGAAGTGTGGGAG +
Preference number: 6 (lower is better)
Translates to: GLRCPLHSPPRCGLH*APQFVPGCSPEVWE
Trigger: CTCCCACACTTCTGGAGAACAGCCTGGAACAAACTGTGGAGCCAAGTGAAGACCACAGCGAGGAGGAGAGTGAAGAGGGCAGCGGAGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
ENST00000406175.3
CDS CCA 72 bp ACGAGGGCGAAGGGTCTTGCTGGTCCTCCAGAAGGGTaGCTTTGGCCTGCTCCTTGCTTATCTCGTTGCATG +
Preference number: 6 (lower is better)
Translates to: TRAKGLAGPPEG*LWPAPCLSRCM
Trigger: CATGCAACGAGATAAGCAAGGAGCAGGCCAAAGCCACCCTTCTGGAGGACCAGCAAGACCCTTCGCCCTCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
ENST00000406175.3
CDS CAA 72 bp CATCTACCAGCCTGGTCCATTCCAGCCTGTGTTCCATaGAGTTCCACAGGCACACCTGCCTGTCCTGAGCAC +
Preference number: 6 (lower is better)
Translates to: HLPAWSIPACVP*SSTGTPACPEH
Trigger: GTGCTCAGGACAGGCAGGTGTGCCTGTGGAACTCAATGGAACACAGGCTGGAATGGACCAGGCTGGTAGATG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
ENST00000406175.3
CDS TCA 72 bp ATCTACCAGCCTGGTCCATTCCAGCCTGTGTTCCATTaGGTTCCACAGGCACACCTGCCTGTCCTGAGCACA +
Preference number: 6 (lower is better)
Translates to: IYQPGPFQPVFH*VPQAHLPVLST
Trigger: TGTGCTCAGGACAGGCAGGTGTGCCTGTGGAACTCAATGGAACACAGGCTGGAATGGACCAGGCTGGTAGAT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
ENST00000406175.3
CDS GCA 72 bp ATGGCTCTTCATAAAGAGGCTCACCAAGGTCTCCGCTaGCCTCTTCACTCTCCTCCTCGCTGTGGTCTTCAC +
Preference number: 6 (lower is better)
Translates to: MALHKEAHQGLR*PLHSPPRCGLH
Trigger: GTGAAGACCACAGCGAGGAGGAGAGTGAAGAGGGCAGCGGAGACCTTGGTGAGCCTCTTTATGAAGAGCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
ENST00000406175.3
CDS CAA 90 bp GTCCTGGTTCATCTACCAGCCTGGTCCATTCCAGCCTGTGTTCCATaGAGTTCCACAGGCACACCTGCCTGTCCTGAGCACATGTCAAGA +
Preference number: 6 (lower is better)
Translates to: VLVHLPAWSIPACVP*SSTGTPACPEHMSR
Trigger: TCTTGACATGTGCTCAGGACAGGCAGGTGTGCCTGTGGAACTCAATGGAACACAGGCTGGAATGGACCAGGCTGGTAGATGAACCAGGAC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
ENST00000406175.3
CDS CAA 90 bp CAAACCACCTGCCTGAGTGCGTTCCTATGGCCACCACTGTGCCACTaGGATGAAAATCTGCACAGTGTCCTGGTTCATCTACCAGCCTGG +
Preference number: 6 (lower is better)
Translates to: QTTCLSAFLWPPLCH*DENLHSVLVHLPAW
Trigger: CCAGGCTGGTAGATGAACCAGGACACTGTGCAGATTTTCATCCAAGTGGCACAGTGGTGGCCATAGGAACGCACTCAGGCAGGTGGTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
ENST00000406175.3
CDS GCA 72 bp ACCACCTGCCTGAGTGCGTTCCTATGGCCACCACTGTaGCACTTGGATGAAAATCTGCACAGTGTCCTGGTT +
Preference number: 6 (lower is better)
Translates to: TTCLSAFLWPPL*HLDENLHSVLV
Trigger: AACCAGGACACTGTGCAGATTTTCATCCAAGTGGCACAGTGGTGGCCATAGGAACGCACTCAGGCAGGTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
ENST00000406175.3
CDS CCA 72 bp GGTGGCTTTGGCCTGCTCCTTGCTTATCTCGTTGCATaGCTCTTCATAAAGAGGCTCACCAAGGTCTCCGCT +
Preference number: 6 (lower is better)
Translates to: GGFGLLLAYLVA*LFIKRLTKVSA
Trigger: AGCGGAGACCTTGGTGAGCCTCTTTATGAAGAGCCATGCAACGAGATAAGCAAGGAGCAGGCCAAAGCCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
ENST00000406175.3
CDS CAA 72 bp CTCCTCCTCGCTGTGGTCTTCACTTGGCTCCACAGTTaGTTCCAGGCTGTTCTCCAGAAGTGTGGGAGAACT +
Preference number: 6 (lower is better)
Translates to: LLLAVVFTWLHS*FQAVLQKCGRT
Trigger: AGTTCTCCCACACTTCTGGAGAACAGCCTGGAACAAACTGTGGAGCCAAGTGAAGACCACAGCGAGGAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
ENST00000406175.3
CDS TCA 72 bp GAGTGCGTTCCTATGGCCACCACTGTGCCACTTGGATaGAAATCTGCACAGTGTCCTGGTTCATCTACCAGC +
Preference number: 6 (lower is better)
Translates to: ECVPMATTVPLG*KSAQCPGSSTS
Trigger: GCTGGTAGATGAACCAGGACACTGTGCAGATTTTCATCCAAGTGGCACAGTGGTGGCCATAGGAACGCACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
ENST00000406175.3
CDS CCA 72 bp CATCCAGAACAAACCACCTGCCTGAGTGCGTTCCTATaGCCACCACTGTGCCACTTGGATGAAAATCTGCAC +
Preference number: 6 (lower is better)
Translates to: HPEQTTCLSAFL*PPLCHLDENLH
Trigger: GTGCAGATTTTCATCCAAGTGGCACAGTGGTGGCCATAGGAACGCACTCAGGCAGGTGGTTTGTTCTGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
ENST00000406175.3
CDS CAA 90 bp CTCTTCACTCTCCTCCTCGCTGTGGTCTTCACTTGGCTCCACAGTTaGTTCCAGGCTGTTCTCCAGAAGTGTGGGAGAACTGCTTATTCT +
Preference number: 6 (lower is better)
Translates to: LFTLLLAVVFTWLHS*FQAVLQKCGRTAYS
Trigger: AGAATAAGCAGTTCTCCCACACTTCTGGAGAACAGCCTGGAACAAACTGTGGAGCCAAGTGAAGACCACAGCGAGGAGGAGAGTGAAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
ENST00000406175.3
CDS CAA 72 bp TGCCTGAGTGCGTTCCTATGGCCACCACTGTGCCACTaGGATGAAAATCTGCACAGTGTCCTGGTTCATCTA +
Preference number: 6 (lower is better)
Translates to: CLSAFLWPPLCH*DENLHSVLVHL
Trigger: TAGATGAACCAGGACACTGTGCAGATTTTCATCCAAGTGGCACAGTGGTGGCCATAGGAACGCACTCAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
ENST00000406175.3
CDS TCA 72 bp CTATCACCTTTCTATTGTGGGATCGCACCAGTGCATTaGTATCTGTCCCATCAGATCCTTCTGGCCAGACAC +
Preference number: 6 (lower is better)
Translates to: LSPFYCGIAPVH*YLSHQILLARH
Trigger: GTGTCTGGCCAGAAGGATCTGATGGGACAGATATCAATGCACTGGTGCGATCCCACAATAGAAAGGTGATAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
ENST00000406175.3
CDS CCA 72 bp GCTCCACAGTTTGTTCCAGGCTGTTCTCCAGAAGTGTaGGAGAACTGCTTATTCTACTTTCCTCTTCAGCTG +
Preference number: 6 (lower is better)
Translates to: APQFVPGCSPEV*ENCLFYFPLQL
Trigger: CAGCTGAAGAGGAAAGTAGAATAAGCAGTTCTCCCACACTTCTGGAGAACAGCCTGGAACAAACTGTGGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
ENST00000406175.3
CDS CCA 72 bp AGTGTGGATAGAGTAACAGAATCCCACACTCTGACGTaGGGTTGTAGAGGCTGCAAAAACACAAGACAGCAG +
Preference number: 6 (lower is better)
Translates to: SVDRVTESHTLT*GCRGCKNTRQQ
Trigger: CTGCTGTCTTGTGTTTTTGCAGCCTCTACAACCCCACGTCAGAGTGTGGGATTCTGTTACTCTATCCACACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406175.3
CDS CAA 72 bp CAAGAGCTGACAGGCGATCTTGAACATCAGAAGTACTaGCAGCAGAAATACTATCATCGAGACTGCCGGCGA +
Preference number: 6 (lower is better)
Translates to: QELTGDLEHQKY*QQKYYHRDCRR
Trigger: TCGCCGGCAGTCTCGATGATAGTATTTCTGCTGCAAGTACTTCTGATGTTCAAGATCGCCTGTCAGCTCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
ENST00000409040.1
CDS CAA 72 bp TTAGGTCCTTTCCCAGGTGTGGGCTCTACAGTAGTTTaGCTCCATATAAGCATGACTCCACCTGAGTCTCCA +
Preference number: 6 (lower is better)
Translates to: LGPFPGVGSTVV*LHISMTPPESP
Trigger: TGGAGACTCAGGTGGAGTCATGCTTATATGGAGCAAAACTACTGTAGAGCCCACACCTGGGAAAGGACCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
ENST00000406175.3
CDS CAA 72 bp GCTATCACCTTTCTATTGTGGGATCGCACCAGTGCATaGATATCTGTCCCATCAGATCCTTCTGGCCAGACA +
Preference number: 6 (lower is better)
Translates to: AITFLLWDRTSA*ISVPSDPSGQT
Trigger: TGTCTGGCCAGAAGGATCTGATGGGACAGATATCAATGCACTGGTGCGATCCCACAATAGAAAGGTGATAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
ENST00000406175.3
CDS CAA 90 bp TCGGCAACAGCTATCACCTTTCTATTGTGGGATCGCACCAGTGCATaGATATCTGTCCCATCAGATCCTTCTGGCCAGACACCAAATACT +
Preference number: 6 (lower is better)
Translates to: SATAITFLLWDRTSA*ISVPSDPSGQTPNT
Trigger: AGTATTTGGTGTCTGGCCAGAAGGATCTGATGGGACAGATATCAATGCACTGGTGCGATCCCACAATAGAAAGGTGATAGCTGTTGCCGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
ENST00000406175.3
CDS GCA 72 bp CCTACTCCACGCTCAAAAGTGCCAAGTCCAATAATCTaGAGTGTGGATAGAGTAACAGAATCCCACACTCTG +
Preference number: 6 (lower is better)
Translates to: PTPRSKVPSPII*SVDRVTESHTL
Trigger: CAGAGTGTGGGATTCTGTTACTCTATCCACACTGCAGATTATTGGACTTGGCACTTTTGAGCGTGGAGTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
ENST00000406175.3
ENST00000480320.1
CDS GCA 72 bp AACAGCTATCACCTTTCTATTGTGGGATCGCACCAGTaGATTGATATCTGTCCCATCAGATCCTTCTGGCCA +
Preference number: 6 (lower is better)
Translates to: NSYHLSIVGSHQ*IDICPIRSFWP
Trigger: TGGCCAGAAGGATCTGATGGGACAGATATCAATGCACTGGTGCGATCCCACAATAGAAAGGTGATAGCTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
ENST00000406175.3
CDS CAA 90 bp CCATCTTTATCCACGCCAGCTATCTGTCCAGTTGCAATCCTAATTTaGTCAGGATGTATAGCAAGGCATTTCACACAGTCTGTATGGCCC +
Preference number: 6 (lower is better)
Translates to: PSLSTPAICPVAILI*SGCIARHFTQSVWP
Trigger: GGGCCATACAGACTGTGTGAAATGCCTTGCTATACATCCTGACAAAATTAGGATTGCAACTGGACAGATAGCTGGCGTGGATAAAGATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
ENST00000480320.1
CDS CAA 90 bp TATACACCTTTAGGTCCTTTCCCAGGTGTGGGCTCTACAGTAGTTTaGCTCCATATAAGCATGACTCCACCTGAGTCTCCAGTAAGAACA +
Preference number: 6 (lower is better)
Translates to: YTPLGPFPGVGSTVV*LHISMTPPESPVRT
Trigger: TGTTCTTACTGGAGACTCAGGTGGAGTCATGCTTATATGGAGCAAAACTACTGTAGAGCCCACACCTGGGAAAGGACCTAAAGGTGTATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
ENST00000406175.3
CDS TCA 72 bp TTATATACTTGTTGTCTGGGGACCAGTCAAGGTGTGTaGTGTAGCTGGAATGTCCAGTGCACCTTCCATATC +
Preference number: 6 (lower is better)
Translates to: LYTCCLGTSQGV*CSWNVQCTFHI
Trigger: GATATGGAAGGTGCACTGGACATTCCAGCTACATCACACACCTTGACTGGTCCCCAGACAACAAGTATATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
ENST00000406175.3
CDS TCA 72 bp GAGTTAAACCTGTTAGAGATCTGGGCTGGAGATAACTaGTACGGGACTCAGCAGATAGAAAATGAGGCCATG +
Preference number: 6 (lower is better)
Translates to: ELNLLEIWAGDN*YGTQQIENEAM
Trigger: CATGGCCTCATTTTCTATCTGCTGAGTCCCGTATCAGTTATCTCCAGCCCAGATCTCTAACAGGTTTAACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480320.1
CDS CCA 72 bp CAAAAGTCATCGGCAACAGCTATCACCTTTCTATTGTaGGATCGCACCAGTGCATTGATATCTGTCCCATCA +
Preference number: 6 (lower is better)
Translates to: QKSSATAITFLL*DRTSALISVPS
Trigger: TGATGGGACAGATATCAATGCACTGGTGCGATCCCACAATAGAAAGGTGATAGCTGTTGCCGATGACTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
ENST00000406175.3
CDS CAA 90 bp AGATGGACTTTACAAAAGTCATCGGCAACAGCTATCACCTTTCTATaGTGGGATCGCACCAGTGCATTGATATCTGTCCCATCAGATCCT +
Preference number: 6 (lower is better)
Translates to: RWTLQKSSATAITFL*WDRTSALISVPSDP
Trigger: AGGATCTGATGGGACAGATATCAATGCACTGGTGCGATCCCACAATAGAAAGGTGATAGCTGTTGCCGATGACTTTTGTAAAGTCCATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
ENST00000406175.3
CDS CAA 90 bp CTCGTGACTCAAGAGCTGACAGGCGATCTTGAACATCAGAAGTACTaGCAGCAGAAATACTATCATCTGTCCACCAAAGAAGAGGTGAAA +
Preference number: 6 (lower is better)
Translates to: LVTQELTGDLEHQKY*QQKYYHLSTKEEVK
Trigger: TTTCACCTCTTCTTTGGTGGACAGATGATAGTATTTCTGCTGCAAGTACTTCTGATGTTCAAGATCGCCTGTCAGCTCTTGAGTCACGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482660.1
CDS CAA 72 bp TCCACGCCAGCTATCTGTCCAGTTGCAATCCTAATTTaGTCAGGATGTATAGCAAGGCATTTCACACAGTCT +
Preference number: 6 (lower is better)
Translates to: STPAICPVAILI*SGCIARHFTQS
Trigger: AGACTGTGTGAAATGCCTTGCTATACATCCTGACAAAATTAGGATTGCAACTGGACAGATAGCTGGCGTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
ENST00000480320.1
CDS CAA 72 bp TTACAAAAGTCATCGGCAACAGCTATCACCTTTCTATaGTGGGATCGCACCAGTGCATTGATATCTGTCCCA +
Preference number: 6 (lower is better)
Translates to: LQKSSATAITFL*WDRTSALISVP
Trigger: TGGGACAGATATCAATGCACTGGTGCGATCCCACAATAGAAAGGTGATAGCTGTTGCCGATGACTTTTGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
ENST00000406175.3
CDS TCA 72 bp TACAGTAGTTTTGCTCCATATAAGCATGACTCCACCTaGGTCTCCAGTAAGAACATCTCCATTCCCCAAGAA +
Preference number: 6 (lower is better)
Translates to: YSSFAPYKHDST*VSSKNISIPQE
Trigger: TTCTTGGGGAATGGAGATGTTCTTACTGGAGACTCAGGTGGAGTCATGCTTATATGGAGCAAAACTACTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
ENST00000406175.3
CDS TCA 72 bp TCGTCCAATCAATGTCCTTACAATCCGATCGATTCCTaGTTAGTTTGCAGCCATTTGGAATGTCCCAGTACA +
Preference number: 6 (lower is better)
Translates to: SSNQCPYNPIDS*LVCSHLECPST
Trigger: TGTACTGGGACATTCCAAATGGCTGCAAACTAATCAGGAATCGATCGGATTGTAAGGACATTGATTGGACGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
ENST00000406175.3
CDS GCA 72 bp TTTGTTCCAGGCTGTTCTCCAGAAGTGTGGGAGAACTaGTTATTCTACTTTCCTCTTCAGCTGTCTCATTTA +
Preference number: 6 (lower is better)
Translates to: FVPGCSPEVWEN*LFYFPLQLSHL
Trigger: TAAATGAGACAGCTGAAGAGGAAAGTAGAATAAGCAGTTCTCCCACACTTCTGGAGAACAGCCTGGAACAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
ENST00000406175.3
CDS CCA 72 bp ATGCGGAGTCAATCACTAAGGGATGAAACTGGTGGTTaGGGGCTAGGAAAGATGATTATGTACAGATTTGAA +
Preference number: 6 (lower is better)
Translates to: MRSQSLRDETGG*GLGKMIMYRFE
Trigger: TTCAAATCTGTACATAATCATCTTTCCTAGCCCCCAACCACCAGTTTCATCCCTTAGTGATTGACTCCGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480320.1
CDS CCA 72 bp GTCGCTTGTACTAGAAAGTGCTATAATGCAGATATTTaGGACACGGTGTTTAGAGAACTTCCTGACTACCTG +
Preference number: 6 (lower is better)
Translates to: VACTRKCYNADI*DTVFRELPDYL
Trigger: CAGGTAGTCAGGAAGTTCTCTAAACACCGTGTCCCAAATATCTGCATTATAGCACTTTCTAGTACAAGCGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480320.1
CDS CAA 72 bp CAATTGAGACAGCACTGGTATGACTTGGTTTTCTGTTaGCACCACTTCCATTGGTTATACAGGACATGGGAA +
Preference number: 6 (lower is better)
Translates to: QLRQHWYDLVFC*HHFHWLYRTWE
Trigger: TTCCCATGTCCTGTATAACCAATGGAAGTGGTGCAAACAGAAAACCAAGTCATACCAGTGCTGTCTCAATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
ENST00000409040.1
CDS CAA 72 bp GATGGTCGTTTTATGCTTTTGGTGGGAGTAGCATTCTaGCTTTCTGGAGTTTGTCTGTGTATTTGGAGAGGT +
Preference number: 6 (lower is better)
Translates to: DGRFMLLVGVAF*LSGVCLCIWRG
Trigger: ACCTCTCCAAATACACAGACAAACTCCAGAAAGCAAGAATGCTACTCCCACCAAAAGCATAAAACGACCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318522.10
ENST00000401738.3
CDS CAA 72 bp CAAGAGCTGACAGGCGATCTTGAACATCAGAAGTACTaGCAGCAGAAATACTATCATCTGTCCACCAAAGAA +
Preference number: 6 (lower is better)
Translates to: QELTGDLEHQKY*QQKYYHLSTKE
Trigger: TTCTTTGGTGGACAGATGATAGTATTTCTGCTGCAAGTACTTCTGATGTTCAAGATCGCCTGTCAGCTCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482660.1
CDS TCA 72 bp AGAGTTTCTTTTCCTGCAATTGAGACAGCACTGGTATaGCTTGGTTTTCTGTTTGCACCACTTCCATTGGTT +
Preference number: 6 (lower is better)
Translates to: RVSFPAIETALV*LGFLFAPLPLV
Trigger: AACCAATGGAAGTGGTGCAAACAGAAAACCAAGTCATACCAGTGCTGTCTCAATTGCAGGAAAAGAAACTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
ENST00000409040.1
CDS CAA 90 bp ATGAAAGAGTTTCTTTTCCTGCAATTGAGACAGCACTGGTATGACTaGGTTTTCTGTTTGCACCACTTCCATTGGTTATACAGGACATGG +
Preference number: 6 (lower is better)
Translates to: MKEFLFLQLRQHWYD*VFCLHHFHWLYRTW
Trigger: CCATGTCCTGTATAACCAATGGAAGTGGTGCAAACAGAAAACCAAGTCATACCAGTGCTGTCTCAATTGCAGGAAAAGAAACTCTTTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
ENST00000409040.1
CDS TCA 72 bp TTTCCACTGAATGATGCTCATGTCTTTTCCACCAGTTaGTATCAGGTGACTGTCATTGTGAGTAAAACTGAC +
Preference number: 6 (lower is better)
Translates to: FPLNDAHVFSTS*YQVTVIVSKTD
Trigger: GTCAGTTTTACTCACAATGACAGTCACCTGATATCAACTGGTGGAAAAGACATGAGCATCATTCAGTGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
ENST00000406175.3
CDS GCA 72 bp TTATTAGTGACACTTCCTAAAGCTCTAAGCGTACTGTaGTTCTGCAGCTATAACAGTCACCTAAATGTTGAG +
Preference number: 6 (lower is better)
Translates to: LLVTLPKALSVL*FCSYNSHLNVE
Trigger: CTCAACATTTAGGTGACTGTTATAGCTGCAGAAGCACAGTACGCTTAGAGCTTTAGGAAGTGTCACTAATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472632.1
CDS TCA 72 bp GTTAGTGAATTGCCGCTCCAGGTCCAGAAGAAAATATaGGATTTACCGCATGTAATTATGGTATTTGCATCT +
Preference number: 6 (lower is better)
Translates to: VSELPLQVQKKI*DLPHVIMVFAS
Trigger: AGATGCAAATACCATAATTACATGCGGTAAATCTCATATTTTCTTCTGGACCTGGAGCGGCAATTCACTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
ENST00000406175.3
CDS CCA 72 bp ATAGTTGTCAACATCGGAAGGAATGAACATGGTAATTaGCCGACCGCGCATAAACATTTTAATATATTCTCC +
Preference number: 6 (lower is better)
Translates to: IVVNIGRNEHGN*PTAHKHFNIFS
Trigger: GGAGAATATATTAAAATGTTTATGCGCGGTCGGCCAATTACCATGTTCATTCCTTCCGATGTTGACAACTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
CDS CAA 72 bp TCAATGTCCTTACAATCCGATCGATTCCTGATTAGTTaGCAGCCATTTGGAATGTCCCAGTACAATATTTCA +
Preference number: 6 (lower is better)
Translates to: SMSLQSDRFLIS*QPFGMSQYNIS
Trigger: TGAAATATTGTACTGGGACATTCCAAATGGCTGCAAACTAATCAGGAATCGATCGGATTGTAAGGACATTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
ENST00000406175.3
CDS CCA 72 bp AGATTTACCGCATGTAATTATGGTATTTGCATCTGTTaGGTGAAACTCCACAGCCAAAACAACTTCATTTGT +
Preference number: 6 (lower is better)
Translates to: RFTACNYGICIC*VKLHSQNNFIC
Trigger: ACAAATGAAGTTGTTTTGGCTGTGGAGTTTCACCCAACAGATGCAAATACCATAATTACATGCGGTAAATCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318522.10
ENST00000401738.3
ENST00000402711.6
ENST00000406175.3
CDS GCA 72 bp AATTTCAATTGTTTTGCAGTCGCTTGTACTAGAAAGTaGTATAATGCAGATATTTGGGACACGGTGTTTAGA +
Preference number: 6 (lower is better)
Translates to: NFNCFAVACTRK*YNADIWDTVFR
Trigger: TCTAAACACCGTGTCCCAAATATCTGCATTATAGCACTTTCTAGTACAAGCGACTGCAAAACAATTGAAATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480320.1
CDS TCA 72 bp CCATCTACTCTGGCATTTCAGGACTATAGTAATGTCTaGAATATTGAAATTGCTTCAAGTTGCTTGACTATT +
Preference number: 6 (lower is better)
Translates to: PSTLAFQDYSNV*NIEIASSCLTI
Trigger: AATAGTCAAGCAACTTGAAGCAATTTCAATATTTCAGACATTACTATAGTCCTGAAATGCCAGAGTAGATGG
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480320.1
CDS CCA 72 bp TCAGTCTTAATTATGAGATCACACATCCATCTACTCTaGCATTTCAGGACTATAGTAATGTCTGAAATATTG +
Preference number: 6 (lower is better)
Translates to: SVLIMRSHIHLL*HFRTIVMSEIL
Trigger: CAATATTTCAGACATTACTATAGTCCTGAAATGCCAGAGTAGATGGATGTGTGATCTCATAATTAAGACTGA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480320.1