RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EML2 (Homo sapiens)

Ensembl gene IDs: ENSG00000125746

Ensembl transcript IDs: ENST00000245925.8, ENST00000399594.7, ENST00000536630.5, ENST00000585386.1, ENST00000586195.5, ENST00000586405.1, ENST00000586770.5, ENST00000586902.5, ENST00000587152.6, ENST00000587804.1, ENST00000588000.5, ENST00000588172.1, ENST00000588272.1, ENST00000588308.5, ENST00000588420.1, ENST00000588496.5, ENST00000588610.5, ENST00000588889.5, ENST00000589876.5, ENST00000590018.1, ENST00000590043.5, ENST00000590575.5, ENST00000590580.5, ENST00000590819.5, ENST00000591721.5, ENST00000592433.5, ENST00000592482.5, ENST00000592853.5, ENST00000592901.1, ENST00000593255.5

Found 789 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGCGTCCCGTCCCGCAGGGCGCAGAGCCCAAACACGCCGCCGTCGTaGGCGCCCAGCACCGCCTGTGTGATACGGTTCCCACCTTTGCCC +
Preference number: 1 (lower is better)
Translates to: SVPSRRAQSPNTPPS*APSTACVIRFPPLP
Trigger: GGGCAAAGGTGGGAACCGTATCACACAGGCGGTGCTGGGCGCCCACGACGGCGGCGTGTTTGGGCTCTGCGCCCTGCGGGACGGGACGCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586195.5
3UTR CCA 90 bp GAATGGCCCGAGCACTTGCCCAGGCGGCTGACCTTGCGGCCGCCCTaGTCCACCGTGTACACGTACACCAAGTTGTCGTGGGAGCCCACG +
Preference number: 1 (lower is better)
Translates to: EWPEHLPRRLTLRPP*STVYTYTKLSWEPT
Trigger: CGTGGGCTCCCACGACAACTTGGTGTACGTGTACACGGTGGACCAGGGCGGCCGCAAGGTCAGCCGCCTGGGCAAGTGCTCGGGCCATTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586195.5
3UTR GCA 90 bp GGGTGGTCCCCACGTACAGTGTGTCTCCGTGGCCCTCTGCCACGGTaGGCACAGGGCCAAAGTCCTCAGGGACCTCCACTTCCTGCAGCT +
Preference number: 1 (lower is better)
Translates to: GWSPRTVCLRGPLPR*AQGQSPQGPPLPAA
Trigger: AGCTGCAGGAAGTGGAGGTCCCTGAGGACTTTGGCCCTGTGCGCACCGTGGCAGAGGGCCACGGAGACACACTGTACGTGGGGACCACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586195.5
3UTR GCA 90 bp GGAATTGCGGGTGGTCCCCACGTACAGTGTGTCTCCGTGGCCCTCTaGCACGGTGCGCACAGGGCCAAAGTCCTCAGGGACCTCCACTTC +
Preference number: 1 (lower is better)
Translates to: GIAGGPHVQCVSVAL*HGAHRAKVLRDLHF
Trigger: GAAGTGGAGGTCCCTGAGGACTTTGGCCCTGTGCGCACCGTGGCAGAGGGCCACGGAGACACACTGTACGTGGGGACCACCCGCAATTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586195.5
3UTR CCA 90 bp TGCAGGATGGAATTGCGGGTGGTCCCCACGTACAGTGTGTCTCCGTaGCCCTCTGCCACGGTGCGCACAGGGCCAAAGTCCTCAGGGACC +
Preference number: 1 (lower is better)
Translates to: CRMELRVVPTYSVSP*PSATVRTGPKSSGT
Trigger: GGTCCCTGAGGACTTTGGCCCTGTGCGCACCGTGGCAGAGGGCCACGGAGACACACTGTACGTGGGGACCACCCGCAATTCCATCCTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586195.5
3UTR CCA 90 bp CCGGCTGAGCGGGCAGGGTCCTCGATGATCCTGCTCCACAGGGGCTaGTGGGAATCTGAGCTCCATAGATGCACCAGCTTATCCTGCCCG +
Preference number: 1 (lower is better)
Translates to: PAERAGSSMILLHRG*WESELHRCTSLSCP
Trigger: CGGGCAGGATAAGCTGGTGCATCTATGGAGCTCAGATTCCCACCAGCCCCTGTGGAGCAGGATCATCGAGGACCCTGCCCGCTCAGCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586195.5
ENST00000590819.5
3UTR GCA 90 bp CACAGCTCTTCCACATGGCCCTGGACCAGCAGTGAGAAGCCTGTGTaGACGGAGCCCTGCAGGATGGAATTGCGGGTGGTCCCCACGTAC +
Preference number: 1 (lower is better)
Translates to: HSSSTWPWTSSEKPV*TEPCRMELRVVPTY
Trigger: GTACGTGGGGACCACCCGCAATTCCATCCTGCAGGGCTCCGTGCACACAGGCTTCTCACTGCTGGTCCAGGGCCATGTGGAAGAGCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586195.5
ENST00000590819.5
3UTR GCA 90 bp AGGGGCTGGTGGGAATCTGAGCTCCATAGATGCACCAGCTTATCCTaGCCGCAGGTCACAAACTGGGCCCGACTGGGGTGTGTGGCCAGG +
Preference number: 1 (lower is better)
Translates to: RGWWESELHRCTSLS*PQVTNWARLGCVAR
Trigger: CCTGGCCACACACCCCAGTCGGGCCCAGTTTGTGACCTGCGGGCAGGATAAGCTGGTGCATCTATGGAGCTCAGATTCCCACCAGCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586195.5
ENST00000590819.5
3UTR CCA 90 bp CCGGAGTTGGTGACAAAGCAGCTGCTGTCCTGGGCCCAATCCAGGTaGGTGATAAAACTGGAATGGCCCGAGCACTTGCCCAGGCGGCTG +
Preference number: 1 (lower is better)
Translates to: PELVTKQLLSWAQSR*VIKLEWPEHLPRRL
Trigger: CAGCCGCCTGGGCAAGTGCTCGGGCCATTCCAGTTTTATCACCCACCTGGATTGGGCCCAGGACAGCAGCTGCTTTGTCACCAACTCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586195.5
3UTR CCA 90 bp ATCAGACCACCCGCCACTGTAGCACACTGGTGTCCTTGCCCCCTGTaGTCAGGGCCATGCTGTCATCCCACAAGAAGGCCACATTTGTCA +
Preference number: 1 (lower is better)
Translates to: IRPPATVAHWCPCPL*SGPCCHPTRRPHLS
Trigger: TGACAAATGTGGCCTTCTTGTGGGATGACAGCATGGCCCTGACCACAGGGGGCAAGGACACCAGTGTGCTACAGTGGCGGGTGGTCTGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586195.5
ENST00000588308.5
3UTR TCA 90 bp ACTCTACTCGGCAATAGACATCTCCCGAAAATAGAATTCCTGCCCTaGCACCTGACTCTTCCCTGGCCGCATCAGACCACCCGCCACTGT +
Preference number: 1 (lower is better)
Translates to: TLLGNRHLPKIEFLP*HLTLPWPHQTTRHC
Trigger: ACAGTGGCGGGTGGTCTGATGCGGCCAGGGAAGAGTCAGGTGTCAGGGCAGGAATTCTATTTTCGGGAGATGTCTATTGCCGAGTAGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586195.5
ENST00000588308.5
3UTR-3UTR TCA 90 bp TCCAGACACCAGCGTCCCGTCCCGCAGGGCGCAGAGCCCAAACACGCCGCCGTCCCAGCACCGCCTGTGTaGTACGGTTCCCACCTTTGC +
Preference number: 2 (lower is better)
Translates to: SRHQRPVPQGAEPKHAAVPAPPV*YGSHLC
Trigger: GCAAAGGTGGGAACCGTATCACACAGGCGGTGCTGG...GACGGCGGCGTGTTTGGGCTCTGCGCCCTGCGGGACGGGACGCTGGTGTCTGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586195.5
3UTR CAA 90 bp CCCTGGCCGCATCAGACCACCCGCCACTGTAGCACACTGGTGTCCTaGCCCCCTGTGGTCAGGGCCATGCTGTCATCCCACAAGAAGGCC +
Preference number: 2 (lower is better)
Translates to: PWPHQTTRHCSTLVS*PPVVRAMLSSHKKA
Trigger: GGCCTTCTTGTGGGATGACAGCATGGCCCTGACCACAGGGGGCAAGGACACCAGTGTGCTACAGTGGCGGGTGGTCTGATGCGGCCAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586195.5
ENST00000588308.5
3UTR-3UTR TCA 90 bp GCCAGGTACGCCCCGTCTGGGGAGAAGCTGACCACTGAGATCTGTTCATTGCCGCCCCAGAGTCCCCCGTaGCCACGTCGCCACCTTCCA +
Preference number: 2 (lower is better)
Translates to: ARYAPSGEKLTTEICSLPPQSPP*PRRHLP
Trigger: TGGAAGGTGGCGACGTGGTCACGGGGGACTCTGGGG...CGGCAATGAACAGATCTCAGTGGTCAGCTTCTCCCCAGACGGGGCGTACCTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000586195.5
3UTR-3UTR CCA 90 bp GATGCACCAGCTTATCCTGCCCGCAGGTCACAAACTGGGCCCGACTGGGGTGTGCCAGGACAGAGCCACTaGGGTGGAAGCCGGCTGAGC +
Preference number: 2 (lower is better)
Translates to: DAPAYPARRSQTGPDWGVPGQSH*GGSRLS
Trigger: GCTCAGCCGGCTTCCACCCCAGTGGCTCTGTCCTGG...CACACCCCAGTCGGGCCCAGTTTGTGACCTGCGGGCAGGATAAGCTGGTGCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586195.5
ENST00000590819.5
3UTR-3UTR GCA 90 bp CACGTACACCAAGTTGTCGTGGGAGCCCACGGCCAGGTACGCCCCGTCTGGGGACCAGCAGCAGCCATCTaGCAGTCACTGTACCCACAG +
Preference number: 2 (lower is better)
Translates to: HVHQVVVGAHGQVRPVWGPAAAI*QSLYPQ
Trigger: CTGTGGGTACAGTGACTGGCAGATGGCTGCTGCTGG...TCCCCAGACGGGGCGTACCTGGCCGTGGGCTCCCACGACAACTTGGTGTACGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399594.7
ENST00000586195.5
ENST00000590819.5
3UTR-3UTR CCA 90 bp ACGTACACCAAGTTGTCGTGGGAGCCCACGGCCAGGTACGCCCCGTCTGGGGAGATAGCCACCAGGTCATaGGTCTCCGTGTCCAGCAGC +
Preference number: 2 (lower is better)
Translates to: TYTKLSWEPTARYAPSGEIATRS*VSVSSS
Trigger: GCTGCTGGACACGGAGACCCATGACCTGGTGGCTAT...CTCCCCAGACGGGGCGTACCTGGCCGTGGGCTCCCACGACAACTTGGTGTACGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399594.7
ENST00000586195.5
ENST00000590819.5
3UTR-3UTR GCA 90 bp CTGGGCCCAATCCAGGTGGGTGATAAAACTGGAATGGCCCGAGCACTTGCCCAGGGCCCTCTGCCACGGTaGGCACAGGGCCAAAGTCCT +
Preference number: 2 (lower is better)
Translates to: LGPIQVGDKTGMARALAQGPLPR*AQGQSP
Trigger: AGGACTTTGGCCCTGTGCGCACCGTGGCAGAGGGCC...CTGGGCAAGTGCTCGGGCCATTCCAGTTTTATCACCCACCTGGATTGGGCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586195.5
3UTR-3UTR CCA 90 bp TGGGCCCAATCCAGGTGGGTGATAAAACTGGAATGGCCCGAGCACTTGCCCAGGACAGAGCCACTGGGGTaGAAGCCGGCTGAGCGGGCA +
Preference number: 2 (lower is better)
Translates to: WAQSRWVIKLEWPEHLPRTEPLG*KPAERA
Trigger: TGCCCGCTCAGCCGGCTTCCACCCCAGTGGCTCTGT...CCTGGGCAAGTGCTCGGGCCATTCCAGTTTTATCACCCACCTGGATTGGGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586195.5
3UTR-3UTR CCA 90 bp CAATCCAGGTGGGTGATAAAACTGGAATGGCCCGAGCACTTGCCCAGGCGGCTGCCAGGACAGAGCCACTaGGGTGGAAGCCGGCTGAGC +
Preference number: 2 (lower is better)
Translates to: QSRWVIKLEWPEHLPRRLPGQSH*GGSRLS
Trigger: GCTCAGCCGGCTTCCACCCCAGTGGCTCTGTCCTGG...CAGCCGCCTGGGCAAGTGCTCGGGCCATTCCAGTTTTATCACCCACCTGGATTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586195.5
3UTR-3UTR CCA 90 bp TTCCCTGGCCGCATCAGACCACCCGCCACTGTAGCACACTGGTGTCCTTGCCCCTACACCAAGTTGTCGTaGGAGCCCACGGCCAGGTAC +
Preference number: 2 (lower is better)
Translates to: FPGRIRPPATVAHWCPCPYTKLS*EPTARY
Trigger: GTACCTGGCCGTGGGCTCCCACGACAACTTGGTGTA...GGGGCAAGGACACCAGTGTGCTACAGTGGCGGGTGGTCTGATGCGGCCAGGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586195.5
3UTR-3UTR CCA 90 bp TCCCCCGTGACCACGTCGCCACCTTCCAAAAAGGTCACACACAGCACATACTTCAACACGCCGCCGTCGTaGGCGCCCAGCACCGCCTGT +
Preference number: 2 (lower is better)
Translates to: SPVTTSPPSKKVTHSTYFNTPPS*APSTAC
Trigger: ACAGGCGGTGCTGGGCGCCCACGACGGCGGCGTGTT...GAAGTATGTGCTGTGTGTGACCTTTTTGGAAGGTGGCGACGTGGTCACGGGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000586195.5
3UTR CAA 90 bp GTGATAAAACTGGAATGGCCCGAGCACTTGCCCAGGCGGCTGACCTaGCGGCCGCCCTGGTCCACCGTGTACACGTACACCAAGTTGTCG +
Preference number: 2 (lower is better)
Translates to: VIKLEWPEHLPRRLT*RPPWSTVYTYTKLS
Trigger: CGACAACTTGGTGTACGTGTACACGGTGGACCAGGGCGGCCGCAAGGTCAGCCGCCTGGGCAAGTGCTCGGGCCATTCCAGTTTTATCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586195.5
3UTR-3UTR TCA 90 bp TTGTCGTGGGAGCCCACGGCCAGGTACGCCCCGTCTGGGGAGAAGCTGACCACTGGAGAAGCTGACCACTaGGATCTGTTCATTGCCGTC +
Preference number: 2 (lower is better)
Translates to: LSWEPTARYAPSGEKLTTGEADH*DLFIAV
Trigger: GACGGCAATGAACAGATCTCAGTGGTCAGCTTCTCC...AGTGGTCAGCTTCTCCCCAGACGGGGCGTACCTGGCCGTGGGCTCCCACGACAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399594.7
ENST00000586195.5
ENST00000590819.5
3UTR-3UTR TCA 90 bp CGCACTGGTGATCTGCTTACAGGTAGCCGGGTCCCAGTACAGAATCTCATAGTCGGGGTGGAAGCCGGCTaGGCGGGCAGGGTCCTCGAT +
Preference number: 2 (lower is better)
Translates to: RTGDLLTGSRVPVQNLIVGVEAG*AGRVLD
Trigger: ATCGAGGACCCTGCCCGCTCAGCCGGCTTCCACCCC...GACTATGAGATTCTGTACTGGGACCCGGCTACCTGTAAGCAGATCACCAGTGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586195.5
3UTR-3UTR CCA 90 bp ACACGTACACCAAGTTGTCGTGGGAGCCCACGGCCAGGTACGCCCCGTCTGGGGTCATTGCCGTCTGTGTaGATAGCCACCAGGTCATGG +
Preference number: 2 (lower is better)
Translates to: TRTPSCRGSPRPGTPRLGSLPSV*IATRSW
Trigger: CCATGACCTGGTGGCTATCCACACAGACGGCAATGA...CCCCAGACGGGGCGTACCTGGCCGTGGGCTCCCACGACAACTTGGTGTACGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399594.7
ENST00000586195.5
ENST00000590819.5
3UTR-3UTR CCA 90 bp TACACGTACACCAAGTTGTCGTGGGAGCCCACGGCCAGGTACGCCCCGTCTGGGTCATTGCCGTCTGTGTaGATAGCCACCAGGTCATGG +
Preference number: 2 (lower is better)
Translates to: YTYTKLSWEPTARYAPSGSLPSV*IATRSW
Trigger: CCATGACCTGGTGGCTATCCACACAGACGGCAATGA...CCCAGACGGGGCGTACCTGGCCGTGGGCTCCCACGACAACTTGGTGTACGTGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399594.7
ENST00000586195.5
ENST00000590819.5
3UTR-3UTR CCA 90 bp CATGTTCCTCACAGCATCCGCACTGGTGATCTGCTTACAGGTAGCCGGGTCCCATACAGTGTGTCTCCGTaGCCCTCTGCCACGGTGCGC +
Preference number: 2 (lower is better)
Translates to: HVPHSIRTGDLLTGSRVPYSVSP*PSATVR
Trigger: GCGCACCGTGGCAGAGGGCCACGGAGACACACTGTA...TGGGACCCGGCTACCTGTAAGCAGATCACCAGTGCGGATGCTGTGAGGAACATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586195.5
3UTR-3UTR GCA 90 bp TGGCCGCATCAGACCACCCGCCACTGTAGCACACTGGTGTCCTTGCCCCCTGTGCCCCATAACCCCCTCTaGTATAGACATACTCTGGGT +
Preference number: 2 (lower is better)
Translates to: WPHQTTRHCSTLVSLPPVPHNPL*YRHTLG
Trigger: ACCCAGAGTATGTCTATAGCAGAGGGGGTTATGGGG...CACAGGGGGCAAGGACACCAGTGTGCTACAGTGGCGGGTGGTCTGATGCGGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000586195.5
ENST00000588308.5
3UTR-3UTR CCA 90 bp GGCTGGTGGGAATCTGAGCTCCATAGATGCACCAGCTTATCCTGCCCGCAGGTCATAGCCACCAGGTCATaGGTCTCCGTGTCCAGCAGC +
Preference number: 2 (lower is better)
Translates to: GWWESELHRCTSLSCPQVIATRS*VSVSSS
Trigger: GCTGCTGGACACGGAGACCCATGACCTGGTGGCTAT...GACCTGCGGGCAGGATAAGCTGGTGCATCTATGGAGCTCAGATTCCCACCAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586195.5
ENST00000590819.5
3UTR-3UTR CCA 90 bp CACAGGGGCTGGTGGGAATCTGAGCTCCATAGATGCACCAGCTTATCCTGCCCGCACAGCTCTTCCACATaGCCCTGGACCAGCAGTGAG +
Preference number: 2 (lower is better)
Translates to: HRGWWESELHRCTSLSCPHSSST*PWTSSE
Trigger: CTCACTGCTGGTCCAGGGCCATGTGGAAGAGCTGTG...CGGGCAGGATAAGCTGGTGCATCTATGGAGCTCAGATTCCCACCAGCCCCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586195.5
ENST00000590819.5
3UTR-3UTR TCA 90 bp ACCACGTCGCCACCTTCCAAAAAGGTCACACACAGCACATACTTCGGTTTCTCACCCCAGAGTCCCCCGTaGCCACGTCGCCACCTTCCA +
Preference number: 2 (lower is better)
Translates to: TTSPPSKKVTHSTYFGFSPQSPP*PRRHLP
Trigger: TGGAAGGTGGCGACGTGGTCACGGGGGACTCTGGGG...TGAGAAACCGAAGTATGTGCTGTGTGTGACCTTTTTGGAAGGTGGCGACGTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000586195.5
ENST00000592853.5
3UTR-3UTR TCA 90 bp TCCACCGTACTTGTGGCTGAGGGCTCGAGGCTGACAGCAGGGGTAGCTAAACAGGCCCTGGGGAGAAGCTaGCCACTGAGATCTGTTCAT +
Preference number: 2 (lower is better)
Translates to: STVLVAEGSRLTAGVAKQALGRS*PLRSVH
Trigger: ATGAACAGATCTCAGTGGTCAGCTTCTCCCCAGGGC...CTGTTTAGCTACCCCTGCTGTCAGCCTCGAGCCCTCAGCCACAAGTACGGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588308.5
3UTR-3UTR CCA 90 bp GCTGGTGGGAATCTGAGCTCCATAGATGCACCAGCTTATCCTGCCCGCAGGTCACACAGCTCTTCCACATaGCCCTGGACCAGCAGTGAG +
Preference number: 2 (lower is better)
Translates to: AGGNLSSIDAPAYPARRSHSSST*PWTSSE
Trigger: CTCACTGCTGGTCCAGGGCCATGTGGAAGAGCTGTG...TGACCTGCGGGCAGGATAAGCTGGTGCATCTATGGAGCTCAGATTCCCACCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586195.5
ENST00000590819.5
3UTR-3UTR CCA 90 bp ATGTTCCTCACAGCATCCGCACTGGTGATCTGCTTACAGGTAGCCGGGTCCCCTGAAGGCATCACATGCTaGGGTCTTCACAGCCCGCAG +
Preference number: 2 (lower is better)
Translates to: MFLTASALVICLQVAGSPEGITC*GLHSPQ
Trigger: CTGCGGGCTGTGAAGACCCCAGCATGTGATGCCTTC...AGGGGACCCGGCTACCTGTAAGCAGATCACCAGTGCGGATGCTGTGAGGAACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586405.1
3UTR-3UTR TCA 90 bp ATAGTCCCCGGAGTTGGTGACAAAGCAGCTGCTGTCCTGGGCCCAATCCAGGTGATAGAATTCCTGCCCTaGCACCTGACTCTTCCCTGG +
Preference number: 2 (lower is better)
Translates to: IVPGVGDKAAAVLGPIQVIEFLP*HLTLPW
Trigger: CCAGGGAAGAGTCAGGTGTCAGGGCAGGAATTCTAT...CACCTGGATTGGGCCCAGGACAGCAGCTGCTTTGTCACCAACTCCGGGGACTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586195.5
ENST00000588308.5
3UTR-3UTR TCA 90 bp ATGTCAGTCTACCCTCCCGCCCCCATAACCCCCTCTGCTATAGACATACTCTGGATAGAATTCCTGCCCTaGCACCTGACTCTTCCCTGG +
Preference number: 2 (lower is better)
Translates to: MSVYPPAPITPSAIDILWIEFLP*HLTLPW
Trigger: CCAGGGAAGAGTCAGGTGTCAGGGCAGGAATTCTAT...CCAGAGTATGTCTATAGCAGAGGGGGTTATGGGGGCGGGAGGGTAGACTGACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
3UTR-3UTR GCA 90 bp GTACTTGTGGCTGAGGGCTCGAGGCTGACAGCAGGGGTAGCTAAACAGGTGAACCCCCATAACCCCCTCTaGTATAGACATACTCTGGGT +
Preference number: 2 (lower is better)
Translates to: VLVAEGSRLTAGVAKQVNPHNPL*YRHTLG
Trigger: ACCCAGAGTATGTCTATAGCAGAGGGGGTTATGGGG...GTTCACCTGTTTAGCTACCCCTGCTGTCAGCCTCGAGCCCTCAGCCACAAGTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000586195.5
ENST00000588308.5
3UTR-3UTR CCA 90 bp ACCACGTCGCCACCTTCCAAAAAGGTCACACACAGCACATACTTCGGTTTCTCACCGTGGGGTGGAAGGTaGCCACCAATACAGCCTCAT +
Preference number: 2 (lower is better)
Translates to: TTSPPSKKVTHSTYFGFSPWGGR*PPIQPH
Trigger: ATGAGGCTGTATTGGTGGCCACCTTCCACCCCACGG...TGAGAAACCGAAGTATGTGCTGTGTGTGACCTTTTTGGAAGGTGGCGACGTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592853.5
3UTR-3UTR GCA 90 bp AAACCAAACACCAATGGATCCCCAAAGCGATGTGACTCCCTCTTCCCACCCGGACCCCATAACCCCCTCTaGTATAGACATACTCTGGGT +
Preference number: 2 (lower is better)
Translates to: KPNTNGSPKRCDSLFPPGPHNPL*YRHTLG
Trigger: ACCCAGAGTATGTCTATAGCAGAGGGGGTTATGGGG...TCCGGGTGGGAAGAGGGAGTCACATCGCTTTGGGGATCCATTGGTGTTTGGTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
3UTR-3UTR CCA 90 bp TCCCCCGTGACCACGTCGCCACCTTCCAAAAAGGTCACACACAGCACATACTTCCCAATACAGCCTCATTaGAGCACTGTAGTCTCAGCT +
Preference number: 2 (lower is better)
Translates to: SPVTTSPPSKKVTHSTYFPIQPH*STVVSA
Trigger: AGCTGAGACTACAGTGCTCCAATGAGGCTGTATTGG...GAAGTATGTGCTGTGTGTGACCTTTTTGGAAGGTGGCGACGTGGTCACGGGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000592853.5
3UTR-3UTR TCA 90 bp TCCCGCCCCCATAACCCCCTCTGCTATAGACATACTCTGGGTATATATTACTCTATAGAATTCCTGCCCTaGCACCTGACTCTTCCCTGG +
Preference number: 2 (lower is better)
Translates to: SRPHNPLCYRHTLGIYYSIEFLP*HLTLPW
Trigger: CCAGGGAAGAGTCAGGTGTCAGGGCAGGAATTCTAT...AGAGTAATATATACCCAGAGTATGTCTATAGCAGAGGGGGTTATGGGGGCGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
3UTR-3UTR CCA 90 bp AAAAAGGTCACACACAGCACATACTTCGGTTTCTCATGTTTCTCAAAGAGGCCTGTGGGGTCCGTGGGGTaGAAGGTGGCCACCAATACA +
Preference number: 2 (lower is better)
Translates to: KKVTHSTYFGFSCFSKRPVGSVG*KVATNT
Trigger: TGTATTGGTGGCCACCTTCCACCCCACGGACCCCAC...AGGCCTCTTTGAGAAACATGAGAAACCGAAGTATGTGCTGTGTGTGACCTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000592853.5
3UTR-3UTR CCA 90 bp GCTGGTGGGAATCTGAGCTCCATAGATGCACCAGCTTATCCTGCCCGCAGGTCAGCTATAGACATACTCTaGGTATATATTACTCTACTC +
Preference number: 2 (lower is better)
Translates to: AGGNLSSIDAPAYPARRSAIDIL*VYITLL
Trigger: GAGTAGAGTAATATATACCCAGAGTATGTCTATAGC...TGACCTGCGGGCAGGATAAGCTGGTGCATCTATGGAGCTCAGATTCCCACCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586195.5
3UTR-3UTR CCA 90 bp CTCACAGCATCCGCACTGGTGATCTGCTTACAGGTAGCCGGGTCCCAGTACAGAGCTATAGACATACTCTaGGTATATATTACTCTACTC +
Preference number: 2 (lower is better)
Translates to: LTASALVICLQVAGSQYRAIDIL*VYITLL
Trigger: GAGTAGAGTAATATATACCCAGAGTATGTCTATAGC...TCTGTACTGGGACCCGGCTACCTGTAAGCAGATCACCAGTGCGGATGCTGTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586195.5
ENST00000588308.5
3UTR-3UTR TCA 90 bp TCTGCTATAGACATACTCTGGGTATATATTACTCTACTCGGCAATAGACATCTCATAGAATTCCTGCCCTaGCACCTGACTCTTCCCTGG +
Preference number: 2 (lower is better)
Translates to: SAIDILWVYITLLGNRHLIEFLP*HLTLPW
Trigger: CCAGGGAAGAGTCAGGTGTCAGGGCAGGAATTCTAT...GAGATGTCTATTGCCGAGTAGAGTAATATATACCCAGAGTATGTCTATAGCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
3UTR-3UTR GCA 90 bp ATACTCTGGGTATATATTACTCTACTCGGCAATAGACATCTCCCGAAAATAGAACCACTTCCTGCAGCTTaGTGTAGTCAGAACCCCAGA +
Preference number: 2 (lower is better)
Translates to: ILWVYITLLGNRHLPKIEPLPAA*CSQNPR
Trigger: TCTGGGGTTCTGACTACAGCAAGCTGCAGGAAGTGG...TTCTATTTTCGGGAGATGTCTATTGCCGAGTAGAGTAATATATACCCAGAGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586195.5
3UTR-3UTR CCA 90 bp TCCCGCCCCCATAACCCCCTCTGCTATAGACATACTCTGGGTATATATTACTCTGCTATAGACATACTCTaGGTATATATTACTCTACTC +
Preference number: 2 (lower is better)
Translates to: SRPHNPLCYRHTLGIYYSAIDIL*VYITLL
Trigger: GAGTAGAGTAATATATACCCAGAGTATGTCTATAGC...AGAGTAATATATACCCAGAGTATGTCTATAGCAGAGGGGGTTATGGGGGCGGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
3UTR-3UTR CCA 90 bp ATACTCTGGGTATATATTACTCTACTCGGCAATAGACATCTCCCGAAAATAGAATGGGCCCAATCCAGGTaGGTGATAAAACTGGAATGG +
Preference number: 2 (lower is better)
Translates to: ILWVYITLLGNRHLPKIEWAQSR*VIKLEW
Trigger: CCATTCCAGTTTTATCACCCACCTGGATTGGGCCCA...TTCTATTTTCGGGAGATGTCTATTGCCGAGTAGAGTAATATATACCCAGAGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586195.5
ENST00000588308.5
3UTR-3UTR CCA 90 bp CCCCATAACCCCCTCTGCTATAGACATACTCTGGGTATATATTACTCTACTCGGGCTATAGACATACTCTaGGTATATATTACTCTACTC +
Preference number: 2 (lower is better)
Translates to: PHNPLCYRHTLGIYYSTRAIDIL*VYITLL
Trigger: GAGTAGAGTAATATATACCCAGAGTATGTCTATAGC...CCGAGTAGAGTAATATATACCCAGAGTATGTCTATAGCAGAGGGGGTTATGGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
3UTR GCA 72 bp GGTGGTCCCCACGTACAGTGTGTCTCCGTGGCCCTCTaGCACGGTGCGCACAGGGCCAAAGTCCTCAGGGAC +
Preference number: 3 (lower is better)
Translates to: GGPHVQCVSVAL*HGAHRAKVLRD
Trigger: GTCCCTGAGGACTTTGGCCCTGTGCGCACCGTGGCAGAGGGCCACGGAGACACACTGTACGTGGGGACCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586195.5
3UTR CCA 72 bp GAATTGCGGGTGGTCCCCACGTACAGTGTGTCTCCGTaGCCCTCTGCCACGGTGCGCACAGGGCCAAAGTCC +
Preference number: 3 (lower is better)
Translates to: ELRVVPTYSVSP*PSATVRTGPKS
Trigger: GGACTTTGGCCCTGTGCGCACCGTGGCAGAGGGCCACGGAGACACACTGTACGTGGGGACCACCCGCAATTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586195.5
ENST00000590819.5
3UTR CCA 72 bp GAGCACTTGCCCAGGCGGCTGACCTTGCGGCCGCCCTaGTCCACCGTGTACACGTACACCAAGTTGTCGTGG +
Preference number: 3 (lower is better)
Translates to: EHLPRRLTLRPP*STVYTYTKLSW
Trigger: CCACGACAACTTGGTGTACGTGTACACGGTGGACCAGGGCGGCCGCAAGGTCAGCCGCCTGGGCAAGTGCTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586195.5
3UTR CCA 72 bp CCTGGCCGCATCAGACCACCCGCCACTGTAGCACACTaGTGTCCTTGCCCCCTGTGGTCAGGGCCATGCTGT +
Preference number: 3 (lower is better)
Translates to: PGRIRPPATVAH*CPCPLWSGPCC
Trigger: ACAGCATGGCCCTGACCACAGGGGGCAAGGACACCAGTGTGCTACAGTGGCGGGTGGTCTGATGCGGCCAGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586195.5
ENST00000588308.5
3UTR-3UTR CAA 90 bp TTGTCGTGGGAGCCCACGGCCAGGTACGCCCCGTCTGGGGAGAAGCTGACCACTTACACGTACACCAAGTaGTCGTGGGAGCCCACGGCC +
Preference number: 3 (lower is better)
Translates to: LSWEPTARYAPSGEKLTTYTYTK*SWEPTA
Trigger: GGCCGTGGGCTCCCACGACAACTTGGTGTACGTGTA...AGTGGTCAGCTTCTCCCCAGACGGGGCGTACCTGGCCGTGGGCTCCCACGACAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399594.7
ENST00000586195.5
ENST00000590819.5
3UTR GCA 72 bp CCACGTACAGTGTGTCTCCGTGGCCCTCTGCCACGGTaGGCACAGGGCCAAAGTCCTCAGGGACCTCCACTT +
Preference number: 3 (lower is better)
Translates to: PRTVCLRGPLPR*AQGQSPQGPPL
Trigger: AAGTGGAGGTCCCTGAGGACTTTGGCCCTGTGCGCACCGTGGCAGAGGGCCACGGAGACACACTGTACGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586195.5
3UTR CCA 72 bp CTGTGTGCACGGAGCCCTGCAGGATGGAATTGCGGGTaGTCCCCACGTACAGTGTGTCTCCGTGGCCCTCTG +
Preference number: 3 (lower is better)
Translates to: LCARSPAGWNCG*SPRTVCLRGPL
Trigger: CAGAGGGCCACGGAGACACACTGTACGTGGGGACCACCCGCAATTCCATCCTGCAGGGCTCCGTGCACACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586195.5
ENST00000590819.5
3UTR GCA 72 bp AGAAGCCTGTGTGCACGGAGCCCTGCAGGATGGAATTaGGGGTGGTCCCCACGTACAGTGTGTCTCCGTGGC +
Preference number: 3 (lower is better)
Translates to: RSLCARSPAGWN*GWSPRTVCLRG
Trigger: GCCACGGAGACACACTGTACGTGGGGACCACCCGCAATTCCATCCTGCAGGGCTCCGTGCACACAGGCTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586195.5
ENST00000590819.5
3UTR CCA 72 bp CCCGCCACTGTAGCACACTGGTGTCCTTGCCCCCTGTaGTCAGGGCCATGCTGTCATCCCACAAGAAGGCCA +
Preference number: 3 (lower is better)
Translates to: PATVAHWCPCPL*SGPCCHPTRRP
Trigger: TGGCCTTCTTGTGGGATGACAGCATGGCCCTGACCACAGGGGGCAAGGACACCAGTGTGCTACAGTGGCGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586195.5
ENST00000588308.5
3UTR GCA 72 bp TGGGAATCTGAGCTCCATAGATGCACCAGCTTATCCTaGCCGCAGGTCACAAACTGGGCCCGACTGGGGTGT +
Preference number: 3 (lower is better)
Translates to: WESELHRCTSLS*PQVTNWARLGC
Trigger: ACACCCCAGTCGGGCCCAGTTTGTGACCTGCGGGCAGGATAAGCTGGTGCATCTATGGAGCTCAGATTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586195.5
ENST00000590819.5
3UTR GCA 72 bp CTCCACAGGGGCTGGTGGGAATCTGAGCTCCATAGATaGACCAGCTTATCCTGCCCGCAGGTCACAAACTGG +
Preference number: 3 (lower is better)
Translates to: LHRGWWESELHR*TSLSCPQVTNW
Trigger: CCAGTTTGTGACCTGCGGGCAGGATAAGCTGGTGCATCTATGGAGCTCAGATTCCCACCAGCCCCTGTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586195.5
ENST00000590819.5
3UTR GCA 72 bp CATTCCATGTTCCTCACAGCATCCGCACTGGTGATCTaGTTACAGGTAGCCGGGTCCCCTGTCAGGACTGGC +
Preference number: 3 (lower is better)
Translates to: HSMFLTASALVI*LQVAGSPVRTG
Trigger: GCCAGTCCTGACAGGGGACCCGGCTACCTGTAAGCAGATCACCAGTGCGGATGCTGTGAGGAACATGGAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586405.1
3UTR CCA 72 bp GTGACAAAGCAGCTGCTGTCCTGGGCCCAATCCAGGTaGGTGATAAAACTGGAATGGCCCGAGCACTTGCCC +
Preference number: 3 (lower is better)
Translates to: VTKQLLSWAQSR*VIKLEWPEHLP
Trigger: GGGCAAGTGCTCGGGCCATTCCAGTTTTATCACCCACCTGGATTGGGCCCAGGACAGCAGCTGCTTTGTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586195.5
3UTR TCA 72 bp CCAAAGTCATCAGCTGAAGCCAGCAACTTCCCATCATaGGAGCGGGCCACAGCGTTGATATCAGTGCCGTCC +
Preference number: 3 (lower is better)
Translates to: PKSSAEASNFPS*ERATALISVPS
Trigger: GGACGGCACTGATATCAACGCTGTGGCCCGCTCTCATGATGGGAAGTTGCTGGCTTCAGCTGATGACTTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586195.5
ENST00000586405.1
ENST00000588308.5
3UTR GCA 72 bp CATTCCATGTTCCTCACAGCATCCGCACTGGTGATCTaGTTACAGGTAGCCGGGTCCCAGTACAGAATCTCA +
Preference number: 3 (lower is better)
Translates to: HSMFLTASALVI*LQVAGSQYRIS
Trigger: TGAGATTCTGTACTGGGACCCGGCTACCTGTAAGCAGATCACCAGTGCGGATGCTGTGAGGAACATGGAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586195.5
ENST00000588308.5
3UTR GCA 72 bp CATGTTTCTCAAAGAGGCCTTGCCGCTTGCTCAAGCTaGCCCCCTCCAAGGTCCAGAAGTAGATGTGAGATT +
Preference number: 3 (lower is better)
Translates to: HVSQRGLAACSS*PPPRSRSRCEI
Trigger: AATCTCACATCTACTTCTGGACCTTGGAGGGGGGCAGCTTGAGCAAGCGGCAAGGCCTCTTTGAGAAACATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592853.5
3UTR TCA 72 bp CCCCAAACCAAACACCAATGGATCCCCAAAGCGATGTaGCTCCCTCTTCCCACCCGGATAAATAGAGACTTC +
Preference number: 3 (lower is better)
Translates to: PQTKHQWIPKAM*LPLPTRINRDF
Trigger: GAAGTCTCTATTTATCCGGGTGGGAAGAGGGAGTCACATCGCTTTGGGGATCCATTGGTGTTTGGTTTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
3UTR CCA 72 bp CCCGCCCCCATAACCCCCTCTGCTATAGACATACTCTaGGTATATATTACTCTACTCGGCAATAGACATCTC +
Preference number: 3 (lower is better)
Translates to: PAPITPSAIDIL*VYITLLGNRHL
Trigger: GAGATGTCTATTGCCGAGTAGAGTAATATATACCCAGAGTATGTCTATAGCAGAGGGGGTTATGGGGGCGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
3UTR-3UTR CAA 90 bp AAAGGTCACACACAGCACATACTTCGGTTTCTCATGTTTCTCAAAGAGGCCTTGACCAATACAGCCTCATaGGAGCACTGTAGTCTCAGC +
Preference number: 3 (lower is better)
Translates to: KGHTQHILRFLMFLKEALTNTAS*EHCSLS
Trigger: GCTGAGACTACAGTGCTCCAATGAGGCTGTATTGGT...CAAGGCCTCTTTGAGAAACATGAGAAACCGAAGTATGTGCTGTGTGTGACCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592853.5
3UTR GCA 72 bp TATGTCAGTCTACCCTCCCGCCCCCATAACCCCCTCTaGTATAGACATACTCTGGGTATATATTACTCTACT +
Preference number: 3 (lower is better)
Translates to: YVSLPSRPHNPL*YRHTLGIYYST
Trigger: AGTAGAGTAATATATACCCAGAGTATGTCTATAGCAGAGGGGGTTATGGGGGCGGGAGGGTAGACTGACATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR GCA 90 bp CACGTACACCAAGTTGTCGTGGGAGCCCACGGCCAGGTACGCCCCGTCTGGGGAGTCTCCGTGGCCCTCTaGCACGGTGCGCACAGGGCC +
Preference number: 4 (lower is better)
Translates to: HVHQVVVGAHGQVRPVWGVSVAL*HGAHRA
Trigger: GGCCCTGTGCGCACCGTGGCAGAGGGCCACGGAGAC...TCCCCAGACGGGGCGTACCTGGCCGTGGGCTCCCACGACAACTTGGTGTACGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399594.7
ENST00000586195.5
ENST00000590819.5
CDS-3UTR CCA 90 bp AACACGCCGCCGTCGTGGGCGCCCAGCACCGCCTGTGTGATACGGTTCCCACCTTCCCAGATGCGCACGTaGGGCGGCAGCGGCTTCCCT +
Preference number: 4 (lower is better)
Translates to: NTPPSWAPSTACVIRFPPSQMRT*GGSGFP
Trigger: AGGGAAGCCGCTGCCGCCCCACGTGCGCATCTGGGA...AGGTGGGAACCGTATCACACAGGCGGTGCTGGGCGCCCACGACGGCGGCGTGTT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586195.5
CDS-3UTR CCA 90 bp TTGTCGTGGGAGCCCACGGCCAGGTACGCCCCGTCTGGGGAGAAGCTGACCACTAACACGCCGCCGTCGTaGGCGCCCAGCACCGCCTGT +
Preference number: 4 (lower is better)
Translates to: LSWEPTARYAPSGEKLTTNTPPS*APSTAC
Trigger: ACAGGCGGTGCTGGGCGCCCACGACGGCGGCGTGTT...AGTGGTCAGCTTCTCCCCAGACGGGGCGTACCTGGCCGTGGGCTCCCACGACAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399594.7
ENST00000586195.5
CDS-3UTR CCA 90 bp GTGGTCCCCACGTACAGTGTGTCTCCGTGGCCCTCTGCCACGGTGCGCACAGGGCAAACTGGGCCCGACTaGGGTGTGTGGCCAGGCCCC +
Preference number: 4 (lower is better)
Translates to: VVPTYSVSPWPSATVRTGQTGPD*GVWPGP
Trigger: GGGGCCTGGCCACACACCCCAGTCGGGCCCAGTTTG...CCCTGTGCGCACCGTGGCAGAGGGCCACGGAGACACACTGTACGTGGGGACCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586195.5
ENST00000590819.5
CDS-3UTR TCA 90 bp AACACGCCGCCGTCGTGGGCGCCCAGCACCGCCTGTGTGATACGGTTCCCACCTAGCGGGCCACAGCGTTaGTATCAGTGCCGTCCGCCC +
Preference number: 4 (lower is better)
Translates to: NTPPSWAPSTACVIRFPPSGPQR*YQCRPP
Trigger: GGGCGGACGGCACTGATATCAACGCTGTGGCCCGCT...AGGTGGGAACCGTATCACACAGGCGGTGCTGGGCGCCCACGACGGCGGCGTGTT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586195.5
CDS-3UTR GCA 90 bp TGGCCGCATCAGACCACCCGCCACTGTAGCACACTGGTGTCCTTGCCCCCTGTGGTCTCCGTGGCCCTCTaGCACGGTGCGCACAGGGCC +
Preference number: 4 (lower is better)
Translates to: WPHQTTRHCSTLVSLPPVVSVAL*HGAHRA
Trigger: GGCCCTGTGCGCACCGTGGCAGAGGGCCACGGAGAC...CACAGGGGGCAAGGACACCAGTGTGCTACAGTGGCGGGTGGTCTGATGCGGCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586195.5
ENST00000588308.5
CDS-3UTR GCA 90 bp TACACGTACACCAAGTTGTCGTGGGAGCCCACGGCCAGGTACGCCCCGTCTGGGGTCTCCGTGGCCCTCTaGCACGGTGCGCACAGGGCC +
Preference number: 4 (lower is better)
Translates to: YTYTKLSWEPTARYAPSGVSVAL*HGAHRA
Trigger: GGCCCTGTGCGCACCGTGGCAGAGGGCCACGGAGAC...CCCAGACGGGGCGTACCTGGCCGTGGGCTCCCACGACAACTTGGTGTACGTGTA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399594.7
ENST00000586195.5
ENST00000590819.5
CDS-3UTR CCA 90 bp CACGTACACCAAGTTGTCGTGGGAGCCCACGGCCAGGTACGCCCCGTCTGGGGATCCCAGATGCGCACGTaGGGCGGCAGCGGCTTCCCT +
Preference number: 4 (lower is better)
Translates to: HVHQVVVGAHGQVRPVWGSQMRT*GGSGFP
Trigger: AGGGAAGCCGCTGCCGCCCCACGTGCGCATCTGGGA...TCCCCAGACGGGGCGTACCTGGCCGTGGGCTCCCACGACAACTTGGTGTACGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399594.7
ENST00000586195.5
CDS-3UTR CCA 90 bp CCCCCTCCAGACACCAGCGTCCCGTCCCGCAGGGCGCAGAGCCCAAACACGCCGCCGTGGGGTGGAAGGTaGCCACCAATACAGCCTCAT +
Preference number: 4 (lower is better)
Translates to: PPPDTSVPSRRAQSPNTPPWGGR*PPIQPH
Trigger: ATGAGGCTGTATTGGTGGCCACCTTCCACCCCACGG...CGGCGTGTTTGGGCTCTGCGCCCTGCGGGACGGGACGCTGGTGTCTGGAGGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586195.5
3UTR CAA 72 bp CTGGAATGGCCCGAGCACTTGCCCAGGCGGCTGACCTaGCGGCCGCCCTGGTCCACCGTGTACACGTACACC +
Preference number: 4 (lower is better)
Translates to: LEWPEHLPRRLT*RPPWSTVYTYT
Trigger: GGTGTACGTGTACACGGTGGACCAGGGCGGCCGCAAGGTCAGCCGCCTGGGCAAGTGCTCGGGCCATTCCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586195.5
CDS-3UTR TCA 90 bp CACGTACAGTGTGTCTCCGTGGCCCTCTGCCACGGTGCGCACAGGGCCAAAGTCCCCCAGAGTCCCCCGTaGCCACGTCGCCACCTTCCA +
Preference number: 4 (lower is better)
Translates to: HVQCVSVALCHGAHRAKVPQSPP*PRRHLP
Trigger: TGGAAGGTGGCGACGTGGTCACGGGGGACTCTGGGG...GACTTTGGCCCTGTGCGCACCGTGGCAGAGGGCCACGGAGACACACTGTACGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000586195.5
ENST00000590819.5
CDS-3UTR TCA 90 bp TGTCTCCGTGGCCCTCTGCCACGGTGCGCACAGGGCCAAAGTCCTCAGGGACCTGGGCAGGGTCCTCGATaGTCCTGCTCCACAGGGGCT +
Preference number: 4 (lower is better)
Translates to: CLRGPLPRCAQGQSPQGPGQGPR*SCSTGA
Trigger: AGCCCCTGTGGAGCAGGATCATCGAGGACCCTGCCC...AGGTCCCTGAGGACTTTGGCCCTGTGCGCACCGTGGCAGAGGGCCACGGAGACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586195.5
CDS-3UTR TCA 90 bp GATGCACCAGCTTATCCTGCCCGCAGGTCACAAACTGGGCCCGACTGGGGTGTGGGGGTGGAAGCCGGCTaGGCGGGCAGGGTCCTCGAT +
Preference number: 4 (lower is better)
Translates to: DAPAYPARRSQTGPDWGVGVEAG*AGRVLD
Trigger: ATCGAGGACCCTGCCCGCTCAGCCGGCTTCCACCCC...CACACCCCAGTCGGGCCCAGTTTGTGACCTGCGGGCAGGATAAGCTGGTGCATC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000586195.5
ENST00000590819.5
CDS-3UTR TCA 90 bp GCTGACCTTGCGGCCGCCCTGGTCCACCGTGTACACGTACACCAAGTTGTCGTGACTTGCCCAGGCGGCTaGCCTTGCGGCCGCCCTGGT +
Preference number: 4 (lower is better)
Translates to: ADLAAALVHRVHVHQVVVTCPGG*PCGRPG
Trigger: ACCAGGGCGGCCGCAAGGTCAGCCGCCTGGGCAAGT...CACGACAACTTGGTGTACGTGTACACGGTGGACCAGGGCGGCCGCAAGGTCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586195.5
CDS-3UTR TCA 90 bp TTGTCGTGGGAGCCCACGGCCAGGTACGCCCCGTCTGGGGAGAAGCTGACCACTGGCGAGGCGCTCTGGTaGCAAGTAGCGGCGGACACT +
Preference number: 4 (lower is better)
Translates to: LSWEPTARYAPSGEKLTTGEALW*QVAADT
Trigger: AGTGTCCGCCGCTACTTGTCACCAGAGCGCCTCGCC...AGTGGTCAGCTTCTCCCCAGACGGGGCGTACCTGGCCGTGGGCTCCCACGACAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399594.7
CDS-3UTR GCA 90 bp CACGTACACCAAGTTGTCGTGGGAGCCCACGGCCAGGTACGCCCCGTCTGGGGAGGCCCTCTGCCACGGTaGGCACAGGGCCAAAGTCCT +
Preference number: 4 (lower is better)
Translates to: HVHQVVVGAHGQVRPVWGGPLPR*AQGQSP
Trigger: AGGACTTTGGCCCTGTGCGCACCGTGGCAGAGGGCC...TCCCCAGACGGGGCGTACCTGGCCGTGGGCTCCCACGACAACTTGGTGTACGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399594.7
ENST00000586195.5
ENST00000590819.5
CDS-3UTR GCA 90 bp CACGTACACCAAGTTGTCGTGGGAGCCCACGGCCAGGTACGCCCCGTCTGGGGATGTAACTGCAGCCGCTaGTCCAGCGCCGACACGCGG +
Preference number: 4 (lower is better)
Translates to: HVHQVVVGAHGQVRPVWGCNCSR*SSADTR
Trigger: CCGCGTGTCGGCGCTGGAGCAGCGGCTGCAGTTACA...TCCCCAGACGGGGCGTACCTGGCCGTGGGCTCCCACGACAACTTGGTGTACGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399594.7
CDS-3UTR CCA 90 bp GCGGGTGGTCCCCACGTACAGTGTGTCTCCGTGGCCCTCTGCCACGGTGCGCACCCACCTTGGTCTCCTTaGCCCAGTCCCACACCGAGA +
Preference number: 4 (lower is better)
Translates to: AGGPHVQCVSVALCHGAHPPWSP*PSPTPR
Trigger: TCTCGGTGTGGGACTGGGCCAAGGAGACCAAGGTGG...GTGCGCACCGTGGCAGAGGGCCACGGAGACACACTGTACGTGGGGACCACCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586195.5
CDS-3UTR CCA 90 bp CAAGTTGTCGTGGGAGCCCACGGCCAGGTACGCCCCGTCTGGGGAGAAGCTGACACAGAGCCACTGGGGTaGAAGCCGGCTGAGCGGGCA +
Preference number: 4 (lower is better)
Translates to: QVVVGAHGQVRPVWGEADTEPLG*KPAERA
Trigger: TGCCCGCTCAGCCGGCTTCCACCCCAGTGGCTCTGT...GTCAGCTTCTCCCCAGACGGGGCGTACCTGGCCGTGGGCTCCCACGACAACTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000399594.7
ENST00000586195.5
ENST00000590819.5
CDS-3UTR CCA 90 bp ACGTACACCAAGTTGTCGTGGGAGCCCACGGCCAGGTACGCCCCGTCTGGGGAGGACACACCGAGGCAGTaGTGCCTAAGCGCGGAGGCG +
Preference number: 4 (lower is better)
Translates to: TYTKLSWEPTARYAPSGEDTPRQ*CLSAEA
Trigger: CGCCTCCGCGCTTAGGCACCACTGCCTCGGTGTGTC...CTCCCCAGACGGGGCGTACCTGGCCGTGGGCTCCCACGACAACTTGGTGTACGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399594.7
CDS-3UTR TCA 90 bp ACACGTACACCAAGTTGTCGTGGGAGCCCACGGCCAGGTACGCCCCGTCTGGGGGCCCTGGACCAGCAGTaGGAAGCCTGTGTGCACGGA +
Preference number: 4 (lower is better)
Translates to: TRTPSCRGSPRPGTPRLGALDQQ*EACVHG
Trigger: TCCGTGCACACAGGCTTCTCACTGCTGGTCCAGGGC...CCCCAGACGGGGCGTACCTGGCCGTGGGCTCCCACGACAACTTGGTGTACGTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000399594.7
ENST00000586195.5
ENST00000590819.5
CDS-3UTR GCA 90 bp TACACGTACACCAAGTTGTCGTGGGAGCCCACGGCCAGGTACGCCCCGTCTGGGGGCCCTCTGCCACGGTaGGCACAGGGCCAAAGTCCT +
Preference number: 4 (lower is better)
Translates to: YTYTKLSWEPTARYAPSGGPLPR*AQGQSP
Trigger: AGGACTTTGGCCCTGTGCGCACCGTGGCAGAGGGCC...CCCAGACGGGGCGTACCTGGCCGTGGGCTCCCACGACAACTTGGTGTACGTGTA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000399594.7
ENST00000586195.5
ENST00000590819.5
CDS-3UTR CCA 90 bp CACGTACACCAAGTTGTCGTGGGAGCCCACGGCCAGGTACGCCCCGTCTGGGGACGTCTGGGATCATCATaGGCACAGGGCGGCCCCTCA +
Preference number: 4 (lower is better)
Translates to: HVHQVVVGAHGQVRPVWGRLGSS*AQGGPS
Trigger: TGAGGGGCCGCCCTGTGCCCATGATGATCCCAGACG...TCCCCAGACGGGGCGTACCTGGCCGTGGGCTCCCACGACAACTTGGTGTACGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000399594.7
CDS-3UTR CCA 90 bp AGCCACTGGGGTGGAAGCCGGCTGAGCGGGCAGGGTCCTGTAATCCCAGCTACTGCACAGTGGGGTCCGTaGGGTGGAAGGTGGCCACCA +
Preference number: 4 (lower is better)
Translates to: SHWGGSRLSGQGPVIPATAQWGP*GGRWPP
Trigger: TGGTGGCCACCTTCCACCCCACGGACCCCACTGTGC...AGTAGCTGGGATTACAGGACCCTGCCCGCTCAGCCGGCTTCCACCCCAGTGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399594.7
CDS-3UTR CCA 90 bp ACACGTACACCAAGTTGTCGTGGGAGCCCACGGCCAGGTACGCCCCGTCTGGGGCGGAGCCCTGCAGGATaGAATTGCGGGTGGTCCCCA +
Preference number: 4 (lower is better)
Translates to: TRTPSCRGSPRPGTPRLGRSPAG*NCGWSP
Trigger: TGGGGACCACCCGCAATTCCATCCTGCAGGGCTCCG...CCCCAGACGGGGCGTACCTGGCCGTGGGCTCCCACGACAACTTGGTGTACGTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000399594.7
ENST00000586195.5
ENST00000590819.5
CDS-3UTR CCA 90 bp CACGTACACCAAGTTGTCGTGGGAGCCCACGGCCAGGTACGCCCCGTCTGGGGACCGCAGGTCACAAACTaGGCCCGACTGGGGTGTGTG +
Preference number: 4 (lower is better)
Translates to: HVHQVVVGAHGQVRPVWGPQVTN*ARLGCV
Trigger: CACACACCCCAGTCGGGCCCAGTTTGTGACCTGCGG...TCCCCAGACGGGGCGTACCTGGCCGTGGGCTCCCACGACAACTTGGTGTACGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000399594.7
ENST00000586195.5
ENST00000590819.5
CDS-3UTR CCA 90 bp ACGTACACCAAGTTGTCGTGGGAGCCCACGGCCAGGTACGCCCCGTCTGGGGAGCCGCAGGTCACAAACTaGGCCCGACTGGGGTGTGTG +
Preference number: 4 (lower is better)
Translates to: TYTKLSWEPTARYAPSGEPQVTN*ARLGCV
Trigger: CACACACCCCAGTCGGGCCCAGTTTGTGACCTGCGG...CTCCCCAGACGGGGCGTACCTGGCCGTGGGCTCCCACGACAACTTGGTGTACGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000399594.7
ENST00000586195.5
ENST00000590819.5
CDS-3UTR CCA 90 bp GCGGGTGGTCCCCACGTACAGTGTGTCTCCGTGGCCCTCTGCCACGGTGCGCACCTGCTCCACAGGGGCTaGTGGGAATCTGAGCTCCAT +
Preference number: 4 (lower is better)
Translates to: AGGPHVQCVSVALCHGAHLLHRG*WESELH
Trigger: ATGGAGCTCAGATTCCCACCAGCCCCTGTGGAGCAG...GTGCGCACCGTGGCAGAGGGCCACGGAGACACACTGTACGTGGGGACCACCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586195.5
ENST00000590819.5
CDS-3UTR CCA 90 bp TGGAATTGCGGGTGGTCCCCACGTACAGTGTGTCTCCGTGGCCCTCTGCCACGGACAGAGCCACTGGGGTaGAAGCCGGCTGAGCGGGCA +
Preference number: 4 (lower is better)
Translates to: WNCGWSPRTVCLRGPLPRTEPLG*KPAERA
Trigger: TGCCCGCTCAGCCGGCTTCCACCCCAGTGGCTCTGT...CCGTGGCAGAGGGCCACGGAGACACACTGTACGTGGGGACCACCCGCAATTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586195.5
ENST00000590819.5
CDS-3UTR CCA 90 bp TACACGTACACCAAGTTGTCGTGGGAGCCCACGGCCAGGTACGCCCCGTCTGGGCCAGGACAGAGCCACTaGGGTGGAAGCCGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: YTYTKLSWEPTARYAPSGPGQSH*GGSRLS
Trigger: GCTCAGCCGGCTTCCACCCCAGTGGCTCTGTCCTGG...CCCAGACGGGGCGTACCTGGCCGTGGGCTCCCACGACAACTTGGTGTACGTGTA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399594.7
ENST00000586195.5
ENST00000590819.5
CDS-3UTR TCA 90 bp ACGTACACCAAGTTGTCGTGGGAGCCCACGGCCAGGTACGCCCCGTCTGGGGAGAGACCCACTCCAGCTTaGGCCGGCAAGAAGGCAGCT +
Preference number: 4 (lower is better)
Translates to: TYTKLSWEPTARYAPSGERPTPA*AGKKAA
Trigger: AGCTGCCTTCTTGCCGGCTCAAGCTGGAGTGGGTCT...CTCCCCAGACGGGGCGTACCTGGCCGTGGGCTCCCACGACAACTTGGTGTACGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399594.7
CDS-3UTR TCA 90 bp ACACGTACACCAAGTTGTCGTGGGAGCCCACGGCCAGGTACGCCCCGTCTGGGGGTCCCGTGGCGATGGTaGCCATATCTGGGTGGATGG +
Preference number: 4 (lower is better)
Translates to: TRTPSCRGSPRPGTPRLGVPWRW*PYLGGW
Trigger: CCATCCACCCAGATATGGTCACCATCGCCACGGGAC...CCCCAGACGGGGCGTACCTGGCCGTGGGCTCCCACGACAACTTGGTGTACGTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000399594.7
ENST00000586195.5
CDS-3UTR TCA 90 bp CCAGGTCATGGGTCTCCGTGTCCAGCAGCAGCCATCTGCCAGTCACTGTACCCACCCCAGAGTCCCCCGTaGCCACGTCGCCACCTTCCA +
Preference number: 4 (lower is better)
Translates to: PGHGSPCPAAAICQSLYPPQSPP*PRRHLP
Trigger: TGGAAGGTGGCGACGTGGTCACGGGGGACTCTGGGG...TGGGTACAGTGACTGGCAGATGGCTGCTGCTGGACACGGAGACCCATGACCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000399594.7
ENST00000586195.5
ENST00000590819.5
CDS-3UTR TCA 90 bp ACGTACACCAAGTTGTCGTGGGAGCCCACGGCCAGGTACGCCCCGTCTGGGGAGCCAGCACCGCCTGTGTaGTACGGTTCCCACCTTTGC +
Preference number: 4 (lower is better)
Translates to: TYTKLSWEPTARYAPSGEPAPPV*YGSHLC
Trigger: GCAAAGGTGGGAACCGTATCACACAGGCGGTGCTGG...CTCCCCAGACGGGGCGTACCTGGCCGTGGGCTCCCACGACAACTTGGTGTACGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399594.7
ENST00000586195.5
CDS-3UTR GCA 90 bp ACGTACACCAAGTTGTCGTGGGAGCCCACGGCCAGGTACGCCCCGTCTGGGGAGGTGTGCACGGAGCCCTaGAGGATGGAATTGCGGGTG +
Preference number: 4 (lower is better)
Translates to: TYTKLSWEPTARYAPSGEVCTEP*RMELRV
Trigger: CACCCGCAATTCCATCCTGCAGGGCTCCGTGCACAC...CTCCCCAGACGGGGCGTACCTGGCCGTGGGCTCCCACGACAACTTGGTGTACGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399594.7
ENST00000586195.5
ENST00000590819.5
CDS-3UTR GCA 90 bp CCCCCTCCAGACACCAGCGTCCCGTCCCGCAGGGCGCAGAGCCCAAACACGCCGCCCCATAACCCCCTCTaGTATAGACATACTCTGGGT +
Preference number: 4 (lower is better)
Translates to: PPPDTSVPSRRAQSPNTPPHNPL*YRHTLG
Trigger: ACCCAGAGTATGTCTATAGCAGAGGGGGTTATGGGG...CGGCGTGTTTGGGCTCTGCGCCCTGCGGGACGGGACGCTGGTGTCTGGAGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000586195.5
CDS-3UTR GCA 90 bp GTCATGGGTCTCCGTGTCCAGCAGCAGCCATCTGCCAGTCACTGTACCCACAGCACACCGAGGCAGTGGTaGCTAAGCGCGGAGGCGCCC +
Preference number: 4 (lower is better)
Translates to: VMGLRVQQQPSASHCTHSTPRQW*LSAEAP
Trigger: GGGCGCCTCCGCGCTTAGGCACCACTGCCTCGGTGT...GCTGTGGGTACAGTGACTGGCAGATGGCTGCTGCTGGACACGGAGACCCATGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399594.7
CDS-3UTR GCA 90 bp ACGTACACCAAGTTGTCGTGGGAGCCCACGGCCAGGTACGCCCCGTCTGGGGAGTGGCGCTACAGTTGCTaGTGGAGGATGTGGTCCGGC +
Preference number: 4 (lower is better)
Translates to: TYTKLSWEPTARYAPSGEWRYSC*WRMWSG
Trigger: GCCGGACCACATCCTCCAGCAGCAACTGTAGCGCCA...CTCCCCAGACGGGGCGTACCTGGCCGTGGGCTCCCACGACAACTTGGTGTACGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399594.7
CDS-3UTR CCA 90 bp TTGTCGTGGGAGCCCACGGCCAGGTACGCCCCGTCTGGGGAGAAGCTGACCACTGGGTGCCAGCTCGTCTaGGATCATCATGGGCACAGG +
Preference number: 4 (lower is better)
Translates to: LSWEPTARYAPSGEKLTTGCQLV*DHHGHR
Trigger: CCTGTGCCCATGATGATCCCAGACGAGCTGGCACCC...AGTGGTCAGCTTCTCCCCAGACGGGGCGTACCTGGCCGTGGGCTCCCACGACAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399594.7
CDS-3UTR CCA 90 bp ACGTACACCAAGTTGTCGTGGGAGCCCACGGCCAGGTACGCCCCGTCTGGGGAGTGTCCAGGCTGTAGGTaGGTGCCAGCTCGTCTGGGA +
Preference number: 4 (lower is better)
Translates to: TYTKLSWEPTARYAPSGECPGCR*VPARLG
Trigger: TCCCAGACGAGCTGGCACCCACCTACAGCCTGGACA...CTCCCCAGACGGGGCGTACCTGGCCGTGGGCTCCCACGACAACTTGGTGTACGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399594.7
CDS-3UTR CCA 90 bp ACACGTACACCAAGTTGTCGTGGGAGCCCACGGCCAGGTACGCCCCGTCTGGGGCCACCTTGGTCTCCTTaGCCCAGTCCCACACCGAGA +
Preference number: 4 (lower is better)
Translates to: TRTPSCRGSPRPGTPRLGPPWSP*PSPTPR
Trigger: TCTCGGTGTGGGACTGGGCCAAGGAGACCAAGGTGG...CCCCAGACGGGGCGTACCTGGCCGTGGGCTCCCACGACAACTTGGTGTACGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399594.7
ENST00000586195.5
CDS-3UTR CCA 90 bp CACGTACACCAAGTTGTCGTGGGAGCCCACGGCCAGGTACGCCCCGTCTGGGGAGTGGGGTCCGTGGGGTaGAAGGTGGCCACCAATACA +
Preference number: 4 (lower is better)
Translates to: HVHQVVVGAHGQVRPVWGVGSVG*KVATNT
Trigger: TGTATTGGTGGCCACCTTCCACCCCACGGACCCCAC...TCCCCAGACGGGGCGTACCTGGCCGTGGGCTCCCACGACAACTTGGTGTACGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000399594.7
ENST00000586195.5
CDS-3UTR CCA 90 bp CACGTACAGTGTGTCTCCGTGGCCCTCTGCCACGGTGCGCACAGGGCCAAAGTCTACAGTGTGTCTCCGTaGCCCTCTGCCACGGTGCGC +
Preference number: 4 (lower is better)
Translates to: HVQCVSVALCHGAHRAKVYSVSP*PSATVR
Trigger: GCGCACCGTGGCAGAGGGCCACGGAGACACACTGTA...GACTTTGGCCCTGTGCGCACCGTGGCAGAGGGCCACGGAGACACACTGTACGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586195.5
ENST00000590819.5
CDS-3UTR CCA 90 bp GCCAGGTACGCCCCGTCTGGGGAGAAGCTGACCACTGAGATCTGTTCATTGCCGCAAACTGGGCCCGACTaGGGTGTGTGGCCAGGCCCC +
Preference number: 4 (lower is better)
Translates to: ARYAPSGEKLTTEICSLPQTGPD*GVWPGP
Trigger: GGGGCCTGGCCACACACCCCAGTCGGGCCCAGTTTG...CGGCAATGAACAGATCTCAGTGGTCAGCTTCTCCCCAGACGGGGCGTACCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399594.7
ENST00000586195.5
ENST00000590819.5
CDS-3UTR CCA 90 bp CACAGCGTTGATATCAGTGCCGTCCGCCCCCTCAGACCAGATCCCAAACACCCCCAAACTGGGCCCGACTaGGGTGTGTGGCCAGGCCCC +
Preference number: 4 (lower is better)
Translates to: HSVDISAVRPLRPDPKHPQTGPD*GVWPGP
Trigger: GGGGCCTGGCCACACACCCCAGTCGGGCCCAGTTTG...GGGGTGTTTGGGATCTGGTCTGAGGGGGCGGACGGCACTGATATCAACGCTGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000586195.5
ENST00000588308.5
CDS-3UTR TCA 90 bp TGGCCGCATCAGACCACCCGCCACTGTAGCACACTGGTGTCCTTGCCCCCTGTGAGACCCACTCCAGCTTaGGCCGGCAAGAAGGCAGCT +
Preference number: 4 (lower is better)
Translates to: WPHQTTRHCSTLVSLPPVRPTPA*AGKKAA
Trigger: AGCTGCCTTCTTGCCGGCTCAAGCTGGAGTGGGTCT...CACAGGGGGCAAGGACACCAGTGTGCTACAGTGGCGGGTGGTCTGATGCGGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000588308.5
CDS-3UTR TCA 90 bp TGGAATTGCGGGTGGTCCCCACGTACAGTGTGTCTCCGTGGCCCTCTGCCACGGGGTGGAGAGGGAAACTaGGTCCCAGATGCGCACGTG +
Preference number: 4 (lower is better)
Translates to: WNCGWSPRTVCLRGPLPRGGEGN*VPDAHV
Trigger: CACGTGCGCATCTGGGACTCAGTTTCCCTCTCCACC...CCGTGGCAGAGGGCCACGGAGACACACTGTACGTGGGGACCACCCGCAATTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586195.5
CDS-3UTR TCA 90 bp GTACACGTACACCAAGTTGTCGTGGGAGCCCACGGCCAGGTACGCCCCGTCTGGCCAGCACCGCCTGTGTaGTACGGTTCCCACCTTTGC +
Preference number: 4 (lower is better)
Translates to: VHVHQVVVGAHGQVRPVWPAPPV*YGSHLC
Trigger: GCAAAGGTGGGAACCGTATCACACAGGCGGTGCTGG...CCAGACGGGGCGTACCTGGCCGTGGGCTCCCACGACAACTTGGTGTACGTGTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399594.7
ENST00000586195.5
CDS-3UTR TCA 90 bp CAGAGCCCAAACACGCCGCCGTCGTGGGCGCCCAGCACCGCCTGTGTGATACGGGGAGAAGCTGACCACTaGGATCTGTTCATTGCCGTC +
Preference number: 4 (lower is better)
Translates to: QSPNTPPSWAPSTACVIRGEADH*DLFIAV
Trigger: GACGGCAATGAACAGATCTCAGTGGTCAGCTTCTCC...CCGTATCACACAGGCGGTGCTGGGCGCCCACGACGGCGGCGTGTTTGGGCTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586195.5
CDS-3UTR TCA 90 bp AGCATCCGCACTGGTGATCTGCTTACAGGTAGCCGGGTCCCCTGTCAGGACTGGAGCGGGCCACAGCGTTaGTATCAGTGCCGTCCGCCC +
Preference number: 4 (lower is better)
Translates to: SIRTGDLLTGSRVPCQDWSGPQR*YQCRPP
Trigger: GGGCGGACGGCACTGATATCAACGCTGTGGCCCGCT...CCAGTCCTGACAGGGGACCCGGCTACCTGTAAGCAGATCACCAGTGCGGATGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586405.1
CDS-3UTR GCA 90 bp GCCAGGTACGCCCCGTCTGGGGAGAAGCTGACCACTGAGATCTGTTCATTGCCGGGCCCTCTGCCACGGTaGGCACAGGGCCAAAGTCCT +
Preference number: 4 (lower is better)
Translates to: ARYAPSGEKLTTEICSLPGPLPR*AQGQSP
Trigger: AGGACTTTGGCCCTGTGCGCACCGTGGCAGAGGGCC...CGGCAATGAACAGATCTCAGTGGTCAGCTTCTCCCCAGACGGGGCGTACCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399594.7
ENST00000586195.5
ENST00000590819.5
CDS-3UTR GCA 90 bp GTACTTGTGGCTGAGGGCTCGAGGCTGACAGCAGGGGTAGCTAAACAGGTGAACGTCTCCGTGGCCCTCTaGCACGGTGCGCACAGGGCC +
Preference number: 4 (lower is better)
Translates to: VLVAEGSRLTAGVAKQVNVSVAL*HGAHRA
Trigger: GGCCCTGTGCGCACCGTGGCAGAGGGCCACGGAGAC...GTTCACCTGTTTAGCTACCCCTGCTGTCAGCCTCGAGCCCTCAGCCACAAGTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586195.5
ENST00000588308.5
CDS-3UTR GCA 90 bp ACACGTACACCAAGTTGTCGTGGGAGCCCACGGCCAGGTACGCCCCGTCTGGGGAGTGAGAAGCCTGTGTaGACGGAGCCCTGCAGGATG +
Preference number: 4 (lower is better)
Translates to: TRTPSCRGSPRPGTPRLGSEKPV*TEPCRM
Trigger: CATCCTGCAGGGCTCCGTGCACACAGGCTTCTCACT...CCCCAGACGGGGCGTACCTGGCCGTGGGCTCCCACGACAACTTGGTGTACGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399594.7
ENST00000586195.5
ENST00000590819.5
CDS-3UTR GCA 90 bp GCGGGTGGTCCCCACGTACAGTGTGTCTCCGTGGCCCTCTGCCACGGTGCGCACTCTGAGCTCCATAGATaGACCAGCTTATCCTGCCCG +
Preference number: 4 (lower is better)
Translates to: AGGPHVQCVSVALCHGAHSELHR*TSLSCP
Trigger: CGGGCAGGATAAGCTGGTGCATCTATGGAGCTCAGA...GTGCGCACCGTGGCAGAGGGCCACGGAGACACACTGTACGTGGGGACCACCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586195.5
ENST00000590819.5
CDS-3UTR CCA 90 bp CACGTACACCAAGTTGTCGTGGGAGCCCACGGCCAGGTACGCCCCGTCTGGGGACCGTGGGGTGGAAGGTaGCCACCAATACAGCCTCAT +
Preference number: 4 (lower is better)
Translates to: HVHQVVVGAHGQVRPVWGPWGGR*PPIQPH
Trigger: ATGAGGCTGTATTGGTGGCCACCTTCCACCCCACGG...TCCCCAGACGGGGCGTACCTGGCCGTGGGCTCCCACGACAACTTGGTGTACGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399594.7
ENST00000586195.5
CDS-3UTR CCA 90 bp AGCACACTGGTGTCCTTGCCCCCTGTGGTCAGGGCCATGCTGTCATCCCACAAGGCACAGTGGGGTCCGTaGGGTGGAAGGTGGCCACCA +
Preference number: 4 (lower is better)
Translates to: STLVSLPPVVRAMLSSHKAQWGP*GGRWPP
Trigger: TGGTGGCCACCTTCCACCCCACGGACCCCACTGTGC...CTTGTGGGATGACAGCATGGCCCTGACCACAGGGGGCAAGGACACCAGTGTGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000586195.5
ENST00000588308.5
CDS-3UTR CCA 90 bp TTGTCGTGGGAGCCCACGGCCAGGTACGCCCCGTCTGGGGAGAAGCTGACCACTCACAGCTCTTCCACATaGCCCTGGACCAGCAGTGAG +
Preference number: 4 (lower is better)
Translates to: LSWEPTARYAPSGEKLTTHSSST*PWTSSE
Trigger: CTCACTGCTGGTCCAGGGCCATGTGGAAGAGCTGTG...AGTGGTCAGCTTCTCCCCAGACGGGGCGTACCTGGCCGTGGGCTCCCACGACAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399594.7
ENST00000586195.5
ENST00000590819.5
CDS-3UTR CCA 90 bp GTGGCCCTCTGCCACGGTGCGCACAGGGCCAAAGTCCTCAGGGACCTCCACTTCCACAGCTCTTCCACATaGCCCTGGACCAGCAGTGAG +
Preference number: 4 (lower is better)
Translates to: VALCHGAHRAKVLRDLHFHSSST*PWTSSE
Trigger: CTCACTGCTGGTCCAGGGCCATGTGGAAGAGCTGTG...GAAGTGGAGGTCCCTGAGGACTTTGGCCCTGTGCGCACCGTGGCAGAGGGCCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586195.5
CDS-3UTR CCA 90 bp CAAGTTGTCGTGGGAGCCCACGGCCAGGTACGCCCCGTCTGGGGAGAAGCTGACCTGCTCCACAGGGGCTaGTGGGAATCTGAGCTCCAT +
Preference number: 4 (lower is better)
Translates to: QVVVGAHGQVRPVWGEADLLHRG*WESELH
Trigger: ATGGAGCTCAGATTCCCACCAGCCCCTGTGGAGCAG...GTCAGCTTCTCCCCAGACGGGGCGTACCTGGCCGTGGGCTCCCACGACAACTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000399594.7
ENST00000586195.5
ENST00000590819.5
CDS-3UTR CCA 90 bp TTGTCGTGGGAGCCCACGGCCAGGTACGCCCCGTCTGGGGAGAAGCTGACCACTTACACCAAGTTGTCGTaGGAGCCCACGGCCAGGTAC +
Preference number: 4 (lower is better)
Translates to: LSWEPTARYAPSGEKLTTYTKLS*EPTARY
Trigger: GTACCTGGCCGTGGGCTCCCACGACAACTTGGTGTA...AGTGGTCAGCTTCTCCCCAGACGGGGCGTACCTGGCCGTGGGCTCCCACGACAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399594.7
ENST00000586195.5
ENST00000590819.5
CDS-3UTR CCA 90 bp GCTGACCTTGCGGCCGCCCTGGTCCACCGTGTACACGTACACCAAGTTGTCGTGACCTTGCGGCCGCCCTaGTCCACCGTGTACACGTAC +
Preference number: 4 (lower is better)
Translates to: ADLAAALVHRVHVHQVVVTLRPP*STVYTY
Trigger: GTACGTGTACACGGTGGACCAGGGCGGCCGCAAGGT...CACGACAACTTGGTGTACGTGTACACGGTGGACCAGGGCGGCCGCAAGGTCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586195.5
CDS-3UTR CCA 90 bp GCCAGGTACGCCCCGTCTGGGGAGAAGCTGACCACTGAGATCTGTTCATTGCCGGAGAGGATGGGGACGTaGCATAGCCACCCACGCGCC +
Preference number: 4 (lower is better)
Translates to: ARYAPSGEKLTTEICSLPERMGT*HSHPRA
Trigger: GGCGCGTGGGTGGCTATGCCACGTCCCCATCCTCTC...CGGCAATGAACAGATCTCAGTGGTCAGCTTCTCCCCAGACGGGGCGTACCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000399594.7
CDS-3UTR TCA 90 bp CTTGCCCCCTGTGGTCAGGGCCATGCTGTCATCCCACAAGAAGGCCACATTTGTCCCCAGAGTCCCCCGTaGCCACGTCGCCACCTTCCA +
Preference number: 4 (lower is better)
Translates to: LAPCGQGHAVIPQEGHICPQSPP*PRRHLP
Trigger: TGGAAGGTGGCGACGTGGTCACGGGGGACTCTGGGG...ACAAATGTGGCCTTCTTGTGGGATGACAGCATGGCCCTGACCACAGGGGGCAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000586195.5
ENST00000588308.5
CDS-3UTR TCA 90 bp AGCATCCGCACTGGTGATCTGCTTACAGGTAGCCGGGTCCCCTGTCAGGACTGGTCCCAGGAGGCAGCATaGGCCACAGCATCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: SIRTGDLLTGSRVPCQDWSQEAA*ATASGW
Trigger: CCAGCCAGATGCTGTGGCTCATGCTGCCTCCTGGGA...CCAGTCCTGACAGGGGACCCGGCTACCTGTAAGCAGATCACCAGTGCGGATGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586405.1
CDS-3UTR GCA 90 bp TACACGTACACCAAGTTGTCGTGGGAGCCCACGGCCAGGTACGCCCCGTCTGGGCAGGCTGTAGGTGGGTaGCAGCTCGTCTGGGATCAT +
Preference number: 4 (lower is better)
Translates to: YTYTKLSWEPTARYAPSGQAVGG*QLVWDH
Trigger: ATGATCCCAGACGAGCTGGCACCCACCTACAGCCTG...CCCAGACGGGGCGTACCTGGCCGTGGGCTCCCACGACAACTTGGTGTACGTGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399594.7
CDS-3UTR GCA 90 bp GTACACGTACACCAAGTTGTCGTGGGAGCCCACGGCCAGGTACGCCCCGTCTGGCCTGCAGGATGGAATTaGGGGTGGTCCCCACGTACA +
Preference number: 4 (lower is better)
Translates to: VHVHQVVVGAHGQVRPVWPAGWN*GWSPRT
Trigger: TGTACGTGGGGACCACCCGCAATTCCATCCTGCAGG...CCAGACGGGGCGTACCTGGCCGTGGGCTCCCACGACAACTTGGTGTACGTGTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000399594.7
ENST00000586195.5
ENST00000590819.5
CDS-3UTR GCA 90 bp TTCCCTGGCCGCATCAGACCACCCGCCACTGTAGCACACTGGTGTCCTTGCCCCCCTGCAGGATGGAATTaGGGGTGGTCCCCACGTACA +
Preference number: 4 (lower is better)
Translates to: FPGRIRPPATVAHWCPCPPAGWN*GWSPRT
Trigger: TGTACGTGGGGACCACCCGCAATTCCATCCTGCAGG...GGGGCAAGGACACCAGTGTGCTACAGTGGCGGGTGGTCTGATGCGGCCAGGGAA
62% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000586195.5
ENST00000588308.5
CDS-3UTR GCA 90 bp TTCCCTGGCCGCATCAGACCACCCGCCACTGTAGCACACTGGTGTCCTTGCCCCAGTGAGAAGCCTGTGTaGACGGAGCCCTGCAGGATG +
Preference number: 4 (lower is better)
Translates to: FPGRIRPPATVAHWCPCPSEKPV*TEPCRM
Trigger: CATCCTGCAGGGCTCCGTGCACACAGGCTTCTCACT...GGGGCAAGGACACCAGTGTGCTACAGTGGCGGGTGGTCTGATGCGGCCAGGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586195.5
ENST00000588308.5
CDS-3UTR GCA 90 bp TACACGTACACCAAGTTGTCGTGGGAGCCCACGGCCAGGTACGCCCCGTCTGGGCCAGCAGCAGCCATCTaGCAGTCACTGTACCCACAG +
Preference number: 4 (lower is better)
Translates to: YTYTKLSWEPTARYAPSGPAAAI*QSLYPQ
Trigger: CTGTGGGTACAGTGACTGGCAGATGGCTGCTGCTGG...CCCAGACGGGGCGTACCTGGCCGTGGGCTCCCACGACAACTTGGTGTACGTGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399594.7
ENST00000586195.5
ENST00000590819.5
CDS-3UTR GCA 90 bp GTCATGGGTCTCCGTGTCCAGCAGCAGCCATCTGCCAGTCACTGTACCCACAGCTCCCTGTTCTTCGCATaGCCGCAGGCGACGCAGAGC +
Preference number: 4 (lower is better)
Translates to: VMGLRVQQQPSASHCTHSSLFFA*PQATQS
Trigger: GCTCTGCGTCGCCTGCGGGCATGCGAAGAACAGGGA...GCTGTGGGTACAGTGACTGGCAGATGGCTGCTGCTGGACACGGAGACCCATGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399594.7
CDS-3UTR CCA 90 bp CTTGCCCCCTGTGGTCAGGGCCATGCTGTCATCCCACAAGAAGGCCACATTTGTTCCCAGATGCGCACGTaGGGCGGCAGCGGCTTCCCT +
Preference number: 4 (lower is better)
Translates to: LAPCGQGHAVIPQEGHICSQMRT*GGSGFP
Trigger: AGGGAAGCCGCTGCCGCCCCACGTGCGCATCTGGGA...ACAAATGTGGCCTTCTTGTGGGATGACAGCATGGCCCTGACCACAGGGGGCAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586195.5
ENST00000588308.5
CDS-3UTR CCA 90 bp CCGGAGTTGGTGACAAAGCAGCTGCTGTCCTGGGCCCAATCCAGGTGGGTGATAGCACAGTGGGGTCCGTaGGGTGGAAGGTGGCCACCA +
Preference number: 4 (lower is better)
Translates to: PELVTKQLLSWAQSRWVIAQWGP*GGRWPP
Trigger: TGGTGGCCACCTTCCACCCCACGGACCCCACTGTGC...TATCACCCACCTGGATTGGGCCCAGGACAGCAGCTGCTTTGTCACCAACTCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586195.5
ENST00000588308.5
CDS-3UTR CCA 90 bp AAAGCAGCTGCTGTCCTGGGCCCAATCCAGGTGGGTGATAAAACTGGAATGGCCAACACGCCGCCGTCGTaGGCGCCCAGCACCGCCTGT +
Preference number: 4 (lower is better)
Translates to: KAAAVLGPIQVGDKTGMANTPPS*APSTAC
Trigger: ACAGGCGGTGCTGGGCGCCCACGACGGCGGCGTGTT...GGCCATTCCAGTTTTATCACCCACCTGGATTGGGCCCAGGACAGCAGCTGCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586195.5
ENST00000588308.5
CDS-3UTR CCA 90 bp CCAGGTCATGGGTCTCCGTGTCCAGCAGCAGCCATCTGCCAGTCACTGTACCCATACAGTGTGTCTCCGTaGCCCTCTGCCACGGTGCGC +
Preference number: 4 (lower is better)
Translates to: PGHGSPCPAAAICQSLYPYSVSP*PSATVR
Trigger: GCGCACCGTGGCAGAGGGCCACGGAGACACACTGTA...TGGGTACAGTGACTGGCAGATGGCTGCTGCTGGACACGGAGACCCATGACCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399594.7
ENST00000586195.5
ENST00000590819.5
CDS-3UTR CCA 90 bp ACACGTACACCAAGTTGTCGTGGGAGCCCACGGCCAGGTACGCCCCGTCTGGGGGGATGGAATTGCGGGTaGTCCCCACGTACAGTGTGT +
Preference number: 4 (lower is better)
Translates to: TRTPSCRGSPRPGTPRLGGWNCG*SPRTVC
Trigger: ACACACTGTACGTGGGGACCACCCGCAATTCCATCC...CCCCAGACGGGGCGTACCTGGCCGTGGGCTCCCACGACAACTTGGTGTACGTGT
62% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000399594.7
ENST00000586195.5
ENST00000590819.5
CDS-3UTR CCA 90 bp TTGTCGTGGGAGCCCACGGCCAGGTACGCCCCGTCTGGGGAGAAGCTGACCACTGGATGGAATTGCGGGTaGTCCCCACGTACAGTGTGT +
Preference number: 4 (lower is better)
Translates to: LSWEPTARYAPSGEKLTTGWNCG*SPRTVC
Trigger: ACACACTGTACGTGGGGACCACCCGCAATTCCATCC...AGTGGTCAGCTTCTCCCCAGACGGGGCGTACCTGGCCGTGGGCTCCCACGACAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000399594.7
ENST00000586195.5
ENST00000590819.5
CDS-3UTR CCA 90 bp CAAGTTGTCGTGGGAGCCCACGGCCAGGTACGCCCCGTCTGGGGAGAAGCTGACTCTTCCACATGGCCCTaGACCAGCAGTGAGAAGCCT +
Preference number: 4 (lower is better)
Translates to: QVVVGAHGQVRPVWGEADSSTWP*TSSEKP
Trigger: AGGCTTCTCACTGCTGGTCCAGGGCCATGTGGAAGA...GTCAGCTTCTCCCCAGACGGGGCGTACCTGGCCGTGGGCTCCCACGACAACTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399594.7
ENST00000586195.5
ENST00000590819.5
CDS-3UTR CCA 90 bp ACACGTACACCAAGTTGTCGTGGGAGCCCACGGCCAGGTACGCCCCGTCTGGGGTCTTCCACATGGCCCTaGACCAGCAGTGAGAAGCCT +
Preference number: 4 (lower is better)
Translates to: TRTPSCRGSPRPGTPRLGSSTWP*TSSEKP
Trigger: AGGCTTCTCACTGCTGGTCCAGGGCCATGTGGAAGA...CCCCAGACGGGGCGTACCTGGCCGTGGGCTCCCACGACAACTTGGTGTACGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399594.7
ENST00000586195.5
ENST00000590819.5
CDS-3UTR CCA 90 bp CCAGGTCATGGGTCTCCGTGTCCAGCAGCAGCCATCTGCCAGTCACTGTACCCACCGCAGGTCACAAACTaGGCCCGACTGGGGTGTGTG +
Preference number: 4 (lower is better)
Translates to: PGHGSPCPAAAICQSLYPPQVTN*ARLGCV
Trigger: CACACACCCCAGTCGGGCCCAGTTTGTGACCTGCGG...TGGGTACAGTGACTGGCAGATGGCTGCTGCTGGACACGGAGACCCATGACCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399594.7
ENST00000586195.5
ENST00000590819.5
CDS-3UTR CCA 90 bp CTGAGCTCCATAGATGCACCAGCTTATCCTGCCCGCAGGTCACAAACTGGGCCCCCAGGACAGAGCCACTaGGGTGGAAGCCGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: LSSIDAPAYPARRSQTGPPGQSH*GGSRLS
Trigger: GCTCAGCCGGCTTCCACCCCAGTGGCTCTGTCCTGG...GGGCCCAGTTTGTGACCTGCGGGCAGGATAAGCTGGTGCATCTATGGAGCTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586195.5
ENST00000590819.5
CDS-3UTR CCA 90 bp TACACGTACACCAAGTTGTCGTGGGAGCCCACGGCCAGGTACGCCCCGTCTGGGATAGCCACCAGGTCATaGGTCTCCGTGTCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: YTYTKLSWEPTARYAPSGIATRS*VSVSSS
Trigger: GCTGCTGGACACGGAGACCCATGACCTGGTGGCTAT...CCCAGACGGGGCGTACCTGGCCGTGGGCTCCCACGACAACTTGGTGTACGTGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399594.7
ENST00000586195.5
ENST00000590819.5
CDS-3UTR CCA 90 bp CACGTACACCAAGTTGTCGTGGGAGCCCACGGCCAGGTACGCCCCGTCTGGGGAAGAAGCAAAGTCCTCTaGCCGTCCCTTTCCAGTCCC +
Preference number: 4 (lower is better)
Translates to: HVHQVVVGAHGQVRPVWGRSKVL*PSLSSP
Trigger: GGGACTGGAAAGGGACGGCCAGAGGACTTTGCTTCT...TCCCCAGACGGGGCGTACCTGGCCGTGGGCTCCCACGACAACTTGGTGTACGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399594.7
CDS-3UTR CCA 90 bp AGCCACTGGGGTGGAAGCCGGCTGAGCGGGCAGGGTCCTGTAATCCCAGCTACTGCCCGACACCCACAGTaGTCCTTCTGGTATCACACC +
Preference number: 4 (lower is better)
Translates to: SHWGGSRLSGQGPVIPATARHPQ*SFWYHT
Trigger: GGTGTGATACCAGAAGGACCACTGTGGGTGTCGGGC...AGTAGCTGGGATTACAGGACCCTGCCCGCTCAGCCGGCTTCCACCCCAGTGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399594.7
CDS-3UTR CCA 90 bp TACACGTACACCAAGTTGTCGTGGGAGCCCACGGCCAGGTACGCCCCGTCTGGGCTTCTTGGGAGAGGATaGGGACGTGGCATAGCCACC +
Preference number: 4 (lower is better)
Translates to: YTYTKLSWEPTARYAPSGLLGRG*GRGIAT
Trigger: GGTGGCTATGCCACGTCCCCATCCTCTCCCAAGAAG...CCCAGACGGGGCGTACCTGGCCGTGGGCTCCCACGACAACTTGGTGTACGTGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399594.7
CDS-3UTR CCA 90 bp CAGAGCCCAAACACGCCGCCGTCGTGGGCGCCCAGCACCGCCTGTGTGATACGGCCATATCTGGGTGGATaGCCAAGCCACACTGAAGAT +
Preference number: 4 (lower is better)
Translates to: QSPNTPPSWAPSTACVIRPYLGG*PSHTED
Trigger: ATCTTCAGTGTGGCTTGGCCATCCACCCAGATATGG...CCGTATCACACAGGCGGTGCTGGGCGCCCACGACGGCGGCGTGTTTGGGCTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586195.5
3UTR CAA 72 bp GAGAAGCCTGTGTGCACGGAGCCCTGCAGGATGGAATaGCGGGTGGTCCCCACGTACAGTGTGTCTCCGTGG +
Preference number: 4 (lower is better)
Translates to: EKPVCTEPCRME*RVVPTYSVSPW
Trigger: CCACGGAGACACACTGTACGTGGGGACCACCCGCAATTCCATCCTGCAGGGCTCCGTGCACACAGGCTTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586195.5
ENST00000590819.5
3UTR CAA 72 bp CATCAGACCACCCGCCACTGTAGCACACTGGTGTCCTaGCCCCCTGTGGTCAGGGCCATGCTGTCATCCCAC +
Preference number: 4 (lower is better)
Translates to: HQTTRHCSTLVS*PPVVRAMLSSH
Trigger: GTGGGATGACAGCATGGCCCTGACCACAGGGGGCAAGGACACCAGTGTGCTACAGTGGCGGGTGGTCTGATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586195.5
ENST00000588308.5
CDS-3UTR TCA 90 bp GCCAGGTACGCCCCGTCTGGGGAGAAGCTGACCACTGAGATCTGTTCATTGCCGGGTGGAGAGGGAAACTaGGTCCCAGATGCGCACGTG +
Preference number: 4 (lower is better)
Translates to: ARYAPSGEKLTTEICSLPGGEGN*VPDAHV
Trigger: CACGTGCGCATCTGGGACTCAGTTTCCCTCTCCACC...CGGCAATGAACAGATCTCAGTGGTCAGCTTCTCCCCAGACGGGGCGTACCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399594.7
ENST00000586195.5
CDS-3UTR TCA 90 bp ATGTCAGTCTACCCTCCCGCCCCCATAACCCCCTCTGCTATAGACATACTCTGGCCCCAGAGTCCCCCGTaGCCACGTCGCCACCTTCCA +
Preference number: 4 (lower is better)
Translates to: MSVYPPAPITPSAIDILWPQSPP*PRRHLP
Trigger: TGGAAGGTGGCGACGTGGTCACGGGGGACTCTGGGG...CCAGAGTATGTCTATAGCAGAGGGGGTTATGGGGGCGGGAGGGTAGACTGACAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR TCA 90 bp TCCCCCGTGACCACGTCGCCACCTTCCAAAAAGGTCACACACAGCACATACTTCCCCCAGAGTCCCCCGTaGCCACGTCGCCACCTTCCA +
Preference number: 4 (lower is better)
Translates to: SPVTTSPPSKKVTHSTYFPQSPP*PRRHLP
Trigger: TGGAAGGTGGCGACGTGGTCACGGGGGACTCTGGGG...GAAGTATGTGCTGTGTGTGACCTTTTTGGAAGGTGGCGACGTGGTCACGGGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000586195.5
ENST00000592853.5
CDS-3UTR TCA 90 bp CTGAGCTCCATAGATGCACCAGCTTATCCTGCCCGCAGGTCACAAACTGGGCCCGCCCTGGACCAGCAGTaGGAAGCCTGTGTGCACGGA +
Preference number: 4 (lower is better)
Translates to: LSSIDAPAYPARRSQTGPALDQQ*EACVHG
Trigger: TCCGTGCACACAGGCTTCTCACTGCTGGTCCAGGGC...GGGCCCAGTTTGTGACCTGCGGGCAGGATAAGCTGGTGCATCTATGGAGCTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586195.5
ENST00000590819.5
CDS-3UTR TCA 90 bp GCTGGTGGGAATCTGAGCTCCATAGATGCACCAGCTTATCCTGCCCGCAGGTCAGGGCAGGGTCCTCGATaGTCCTGCTCCACAGGGGCT +
Preference number: 4 (lower is better)
Translates to: AGGNLSSIDAPAYPARRSGQGPR*SCSTGA
Trigger: AGCCCCTGTGGAGCAGGATCATCGAGGACCCTGCCC...TGACCTGCGGGCAGGATAAGCTGGTGCATCTATGGAGCTCAGATTCCCACCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586195.5
ENST00000590819.5
CDS-3UTR TCA 90 bp ACCCCAAACCAAACACCAATGGATCCCCAAAGCGATGTGACTCCCTCTTCCCACGGGGTGGAAGCCGGCTaGGCGGGCAGGGTCCTCGAT +
Preference number: 4 (lower is better)
Translates to: TPNQTPMDPQSDVTPSSHGVEAG*AGRVLD
Trigger: ATCGAGGACCCTGCCCGCTCAGCCGGCTTCCACCCC...GTGGGAAGAGGGAGTCACATCGCTTTGGGGATCCATTGGTGTTTGGTTTGGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
CDS-3UTR TCA 90 bp TTGTCGTGGGAGCCCACGGCCAGGTACGCCCCGTCTGGGGAGAAGCTGACCACTCGTCTGGGGAGAAGCTaGCCACTGAGATCTGTTCAT +
Preference number: 4 (lower is better)
Translates to: LSWEPTARYAPSGEKLTTRLGRS*PLRSVH
Trigger: ATGAACAGATCTCAGTGGTCAGCTTCTCCCCAGACG...AGTGGTCAGCTTCTCCCCAGACGGGGCGTACCTGGCCGTGGGCTCCCACGACAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000399594.7
ENST00000586195.5
ENST00000590819.5
CDS-3UTR TCA 90 bp GCCAGGTACGCCCCGTCTGGGGAGAAGCTGACCACTGAGATCTGTTCATTGCCGGAGACTCCACCTCGATaGTCCTGCTCCACAGGGGCT +
Preference number: 4 (lower is better)
Translates to: ARYAPSGEKLTTEICSLPETPPR*SCSTGA
Trigger: AGCCCCTGTGGAGCAGGATCATCGAGGTGGAGTCTC...CGGCAATGAACAGATCTCAGTGGTCAGCTTCTCCCCAGACGGGGCGTACCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000399594.7
CDS-3UTR GCA 90 bp ACGTACACCAAGTTGTCGTGGGAGCCCACGGCCAGGTACGCCCCGTCTGGGGAGCCACTTCCTGCAGCTTaGTGTAGTCAGAACCCCAGA +
Preference number: 4 (lower is better)
Translates to: TYTKLSWEPTARYAPSGEPLPAA*CSQNPR
Trigger: TCTGGGGTTCTGACTACAGCAAGCTGCAGGAAGTGG...CTCCCCAGACGGGGCGTACCTGGCCGTGGGCTCCCACGACAACTTGGTGTACGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399594.7
ENST00000586195.5
CDS-3UTR GCA 90 bp TGTCTCCGTGGCCCTCTGCCACGGTGCGCACAGGGCCAAAGTCCTCAGGGACCTCCACTTCCTGCAGCTTaGTGTAGTCAGAACCCCAGA +
Preference number: 4 (lower is better)
Translates to: CLRGPLPRCAQGQSPQGPPLPAA*CSQNPR
Trigger: TCTGGGGTTCTGACTACAGCAAGCTGCAGGAAGTGG...AGGTCCCTGAGGACTTTGGCCCTGTGCGCACCGTGGCAGAGGGCCACGGAGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586195.5
CDS-3UTR GCA 90 bp AAACCAAACACCAATGGATCCCCAAAGCGATGTGACTCCCTCTTCCCACCCGGAGTCTCCGTGGCCCTCTaGCACGGTGCGCACAGGGCC +
Preference number: 4 (lower is better)
Translates to: KPNTNGSPKRCDSLFPPGVSVAL*HGAHRA
Trigger: GGCCCTGTGCGCACCGTGGCAGAGGGCCACGGAGAC...TCCGGGTGGGAAGAGGGAGTCACATCGCTTTGGGGATCCATTGGTGTTTGGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR GCA 90 bp GTACACGTACACCAAGTTGTCGTGGGAGCCCACGGCCAGGTACGCCCCGTCTGGTGCACCAGCTTATCCTaGCCGCAGGTCACAAACTGG +
Preference number: 4 (lower is better)
Translates to: VHVHQVVVGAHGQVRPVWCTSLS*PQVTNW
Trigger: CCAGTTTGTGACCTGCGGGCAGGATAAGCTGGTGCA...CCAGACGGGGCGTACCTGGCCGTGGGCTCCCACGACAACTTGGTGTACGTGTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000399594.7
ENST00000586195.5
ENST00000590819.5
CDS-3UTR GCA 90 bp CACGTACACCAAGTTGTCGTGGGAGCCCACGGCCAGGTACGCCCCGTCTGGGGATCTGAGCTCCATAGATaGACCAGCTTATCCTGCCCG +
Preference number: 4 (lower is better)
Translates to: HVHQVVVGAHGQVRPVWGSELHR*TSLSCP
Trigger: CGGGCAGGATAAGCTGGTGCATCTATGGAGCTCAGA...TCCCCAGACGGGGCGTACCTGGCCGTGGGCTCCCACGACAACTTGGTGTACGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399594.7
ENST00000586195.5
ENST00000590819.5
CDS-3UTR GCA 90 bp CCAGGTCATGGGTCTCCGTGTCCAGCAGCAGCCATCTGCCAGTCACTGTACCCATCGTCTTCCTGTAACTaGAGCCGCTGCTCCAGCGCC +
Preference number: 4 (lower is better)
Translates to: PGHGSPCPAAAICQSLYPSSSCN*SRCSSA
Trigger: GGCGCTGGAGCAGCGGCTGCAGTTACAGGAAGACGA...TGGGTACAGTGACTGGCAGATGGCTGCTGCTGGACACGGAGACCCATGACCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399594.7
CDS-3UTR GCA 90 bp CAAGTTGTCGTGGGAGCCCACGGCCAGGTACGCCCCGTCTGGGGAGAAGCTGACTTTTGGCGCTACAGTTaGTGCTGGAGGATGTGGTCC +
Preference number: 4 (lower is better)
Translates to: QVVVGAHGQVRPVWGEADFWRYS*CWRMWS
Trigger: GGACCACATCCTCCAGCAGCAACTGTAGCGCCAAAA...GTCAGCTTCTCCCCAGACGGGGCGTACCTGGCCGTGGGCTCCCACGACAACTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000399594.7
CDS-3UTR GCA 90 bp AAACCAAACACCAATGGATCCCCAAAGCGATGTGACTCCCTCTTCCCACCCGGACGTGGAGCTCGCCCCTaGCATCCCGCGTCCACAGGC +
Preference number: 4 (lower is better)
Translates to: KPNTNGSPKRCDSLFPPGRGARP*HPASTG
Trigger: GCCTGTGGACGCGGGATGGCAGGGGCGAGCTCCACG...TCCGGGTGGGAAGAGGGAGTCACATCGCTTTGGGGATCCATTGGTGTTTGGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536630.5
CDS-3UTR CCA 90 bp TACACGTACACCAAGTTGTCGTGGGAGCCCACGGCCAGGTACGCCCCGTCTGGGCCAGCACGTGTAAGGTaGAGAGGGAAACTGAGTCCC +
Preference number: 4 (lower is better)
Translates to: YTYTKLSWEPTARYAPSGPARVR*RGKLSP
Trigger: GGGACTCAGTTTCCCTCTCCACCTTACACGTGCTGG...CCCAGACGGGGCGTACCTGGCCGTGGGCTCCCACGACAACTTGGTGTACGTGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399594.7
ENST00000586195.5
CDS-3UTR CCA 90 bp ACCCCAAACCAAACACCAATGGATCCCCAAAGCGATGTGACTCCCTCTTCCCACAACACGCCGCCGTCGTaGGCGCCCAGCACCGCCTGT +
Preference number: 4 (lower is better)
Translates to: TPNQTPMDPQSDVTPSSHNTPPS*APSTAC
Trigger: ACAGGCGGTGCTGGGCGCCCACGACGGCGGCGTGTT...GTGGGAAGAGGGAGTCACATCGCTTTGGGGATCCATTGGTGTTTGGTTTGGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CCA 90 bp TGGAATTGCGGGTGGTCCCCACGTACAGTGTGTCTCCGTGGCCCTCTGCCACGGGGATGGAATTGCGGGTaGTCCCCACGTACAGTGTGT +
Preference number: 4 (lower is better)
Translates to: WNCGWSPRTVCLRGPLPRGWNCG*SPRTVC
Trigger: ACACACTGTACGTGGGGACCACCCGCAATTCCATCC...CCGTGGCAGAGGGCCACGGAGACACACTGTACGTGGGGACCACCCGCAATTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000586195.5
ENST00000590819.5
CDS-3UTR CCA 90 bp GGCTGGTGGGAATCTGAGCTCCATAGATGCACCAGCTTATCCTGCCCGCAGGTCCGGAGCCCTGCAGGATaGAATTGCGGGTGGTCCCCA +
Preference number: 4 (lower is better)
Translates to: GWWESELHRCTSLSCPQVRSPAG*NCGWSP
Trigger: TGGGGACCACCCGCAATTCCATCCTGCAGGGCTCCG...GACCTGCGGGCAGGATAAGCTGGTGCATCTATGGAGCTCAGATTCCCACCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586195.5
ENST00000590819.5
CDS-3UTR CCA 90 bp CTCATAGTCCCCGGAGTTGGTGACAAAGCAGCTGCTGTCCTGGGCCCAATCCAGCCGCAGGTCACAAACTaGGCCCGACTGGGGTGTGTG +
Preference number: 4 (lower is better)
Translates to: LIVPGVGDKAAAVLGPIQPQVTN*ARLGCV
Trigger: CACACACCCCAGTCGGGCCCAGTTTGTGACCTGCGG...CTGGATTGGGCCCAGGACAGCAGCTGCTTTGTCACCAACTCCGGGGACTATGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586195.5
ENST00000588308.5
CDS-3UTR CCA 90 bp AGCCACTGGGGTGGAAGCCGGCTGAGCGGGCAGGGTCCTGTAATCCCAGCTACTCTCCACAGGGGCTGGTaGGAATCTGAGCTCCATAGA +
Preference number: 4 (lower is better)
Translates to: SHWGGSRLSGQGPVIPATLHRGW*ESELHR
Trigger: TCTATGGAGCTCAGATTCCCACCAGCCCCTGTGGAG...AGTAGCTGGGATTACAGGACCCTGCCCGCTCAGCCGGCTTCCACCCCAGTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399594.7
CDS-3UTR CCA 90 bp AAGCAGCTGCTGTCCTGGGCCCAATCCAGGTGGGTGATAAAACTGGAATGGCCCACAGAGCCACTGGGGTaGAAGCCGGCTGAGCGGGCA +
Preference number: 4 (lower is better)
Translates to: KQLLSWAQSRWVIKLEWPTEPLG*KPAERA
Trigger: TGCCCGCTCAGCCGGCTTCCACCCCAGTGGCTCTGT...GGGCCATTCCAGTTTTATCACCCACCTGGATTGGGCCCAGGACAGCAGCTGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586195.5
CDS-3UTR CCA 90 bp ACGTACACCAAGTTGTCGTGGGAGCCCACGGCCAGGTACGCCCCGTCTGGGGAGTCATTGCCGTCTGTGTaGATAGCCACCAGGTCATGG +
Preference number: 4 (lower is better)
Translates to: TYTKLSWEPTARYAPSGESLPSV*IATRSW
Trigger: CCATGACCTGGTGGCTATCCACACAGACGGCAATGA...CTCCCCAGACGGGGCGTACCTGGCCGTGGGCTCCCACGACAACTTGGTGTACGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399594.7
ENST00000586195.5
ENST00000590819.5
CDS-3UTR CCA 90 bp CAAGTTGTCGTGGGAGCCCACGGCCAGGTACGCCCCGTCTGGGGAGAAGCTGACGCCACATTTGTCACATaGCTGCTGTGTCCACCGTAC +
Preference number: 4 (lower is better)
Translates to: QVVVGAHGQVRPVWGEADATFVT*LLCPPY
Trigger: GTACGGTGGACACAGCAGCCATGTGACAAATGTGGC...GTCAGCTTCTCCCCAGACGGGGCGTACCTGGCCGTGGGCTCCCACGACAACTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586195.5
CDS-3UTR CCA 90 bp CCAGGTCATGGGTCTCCGTGTCCAGCAGCAGCCATCTGCCAGTCACTGTACCCAAGGTCGCCTCCTTCTTaGGAGAGGATGGGGACGTGG +
Preference number: 4 (lower is better)
Translates to: PGHGSPCPAAAICQSLYPRSPPS*ERMGTW
Trigger: CCACGTCCCCATCCTCTCCCAAGAAGGAGGCGACCT...TGGGTACAGTGACTGGCAGATGGCTGCTGCTGGACACGGAGACCCATGACCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399594.7
CDS-3UTR CCA 90 bp GCCAGGTACGCCCCGTCTGGGGAGAAGCTGACCACTGAGATCTGTTCATTGCCGCGCTACAGTTGCTGCTaGAGGATGTGGTCCGGCTGC +
Preference number: 4 (lower is better)
Translates to: ARYAPSGEKLTTEICSLPRYSCC*RMWSGC
Trigger: GCAGCCGGACCACATCCTCCAGCAGCAACTGTAGCG...CGGCAATGAACAGATCTCAGTGGTCAGCTTCTCCCCAGACGGGGCGTACCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399594.7
CDS-3UTR CCA 90 bp AAACCAAACACCAATGGATCCCCAAAGCGATGTGACTCCCTCTTCCCACCCGGAGACGGGGACAGGGCGTaGAGCTCGCCCCTGCCATCC +
Preference number: 4 (lower is better)
Translates to: KPNTNGSPKRCDSLFPPGDGDRA*SSPLPS
Trigger: GGATGGCAGGGGCGAGCTCCACGCCCTGTCCCCGTC...TCCGGGTGGGAAGAGGGAGTCACATCGCTTTGGGGATCCATTGGTGTTTGGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000536630.5
CDS-3UTR TCA 90 bp CTCATAGTCCCCGGAGTTGGTGACAAAGCAGCTGCTGTCCTGGGCCCAATCCAGGGTGGAGAGGGAAACTaGGTCCCAGATGCGCACGTG +
Preference number: 4 (lower is better)
Translates to: LIVPGVGDKAAAVLGPIQGGEGN*VPDAHV
Trigger: CACGTGCGCATCTGGGACTCAGTTTCCCTCTCCACC...CTGGATTGGGCCCAGGACAGCAGCTGCTTTGTCACCAACTCCGGGGACTATGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586195.5
ENST00000588308.5
CDS-3UTR TCA 90 bp TACACGTACACCAAGTTGTCGTGGGAGCCCACGGCCAGGTACGCCCCGTCTGGGCCTCATTGGAGCACTTaGCATCCACCACCTTGGTCT +
Preference number: 4 (lower is better)
Translates to: YTYTKLSWEPTARYAPSGPHWST*HPPPWS
Trigger: AGACCAAGGTGGTGGATGTCAAGTGCTCCAATGAGG...CCCAGACGGGGCGTACCTGGCCGTGGGCTCCCACGACAACTTGGTGTACGTGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399594.7
ENST00000586195.5
CDS-3UTR TCA 90 bp ATGTCAGTCTACCCTCCCGCCCCCATAACCCCCTCTGCTATAGACATACTCTGGGGGCAGGGTCCTCGATaGTCCTGCTCCACAGGGGCT +
Preference number: 4 (lower is better)
Translates to: MSVYPPAPITPSAIDILWGQGPR*SCSTGA
Trigger: AGCCCCTGTGGAGCAGGATCATCGAGGACCCTGCCC...CCAGAGTATGTCTATAGCAGAGGGGGTTATGGGGGCGGGAGGGTAGACTGACAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
CDS-3UTR TCA 90 bp TGGAATTGCGGGTGGTCCCCACGTACAGTGTGTCTCCGTGGCCCTCTGCCACGGCGTCTGGGGAGAAGCTaGCCACTGAGATCTGTTCAT +
Preference number: 4 (lower is better)
Translates to: WNCGWSPRTVCLRGPLPRRLGRS*PLRSVH
Trigger: ATGAACAGATCTCAGTGGTCAGCTTCTCCCCAGACG...CCGTGGCAGAGGGCCACGGAGACACACTGTACGTGGGGACCACCCGCAATTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586195.5
ENST00000590819.5
CDS-3UTR TCA 90 bp TTCCATGTTCCTCACAGCATCCGCACTGGTGATCTGCTTACAGGTAGCCGGGTCAGCGGGCCACAGCGTTaGTATCAGTGCCGTCCGCCC +
Preference number: 4 (lower is better)
Translates to: FHVPHSIRTGDLLTGSRVSGPQR*YQCRPP
Trigger: GGGCGGACGGCACTGATATCAACGCTGTGGCCCGCT...GACCCGGCTACCTGTAAGCAGATCACCAGTGCGGATGCTGTGAGGAACATGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586195.5
ENST00000586405.1
ENST00000588308.5
CDS-3UTR TCA 90 bp CACAGCGTTGATATCAGTGCCGTCCGCCCCCTCAGACCAGATCCCAAACACCCCAGCAACTTCCCATCATaGGAGCGGGCCACAGCGTTG +
Preference number: 4 (lower is better)
Translates to: HSVDISAVRPLRPDPKHPSNFPS*ERATAL
Trigger: CAACGCTGTGGCCCGCTCTCATGATGGGAAGTTGCT...GGGGTGTTTGGGATCTGGTCTGAGGGGGCGGACGGCACTGATATCAACGCTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000586195.5
ENST00000586405.1
ENST00000588308.5
CDS-3UTR TCA 90 bp TACACGTACACCAAGTTGTCGTGGGAGCCCACGGCCAGGTACGCCCCGTCTGGGGCCAAAGTCATCAGCTaGAGCCAGCAACTTCCCATC +
Preference number: 4 (lower is better)
Translates to: YTYTKLSWEPTARYAPSGAKVIS*SQQLPI
Trigger: GATGGGAAGTTGCTGGCTTCAGCTGATGACTTTGGC...CCCAGACGGGGCGTACCTGGCCGTGGGCTCCCACGACAACTTGGTGTACGTGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586195.5
CDS-3UTR TCA 90 bp CACAGGGGCTGGTGGGAATCTGAGCTCCATAGATGCACCAGCTTATCCTGCCCGATCCCCAAAGCGATGTaGCTCCCTCTTCCCACCCGG +
Preference number: 4 (lower is better)
Translates to: HRGWWESELHRCTSLSCPIPKAM*LPLPTR
Trigger: CCGGGTGGGAAGAGGGAGTCACATCGCTTTGGGGAT...CGGGCAGGATAAGCTGGTGCATCTATGGAGCTCAGATTCCCACCAGCCCCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586195.5
CDS-3UTR TCA 90 bp ACAGCGTTGATATCAGTGCCGTCCGCCCCCTCAGACCAGATCCCAAACACCCCAATCCCCAAAGCGATGTaGCTCCCTCTTCCCACCCGG +
Preference number: 4 (lower is better)
Translates to: TALISVPSAPSDQIPNTPIPKAM*LPLPTR
Trigger: CCGGGTGGGAAGAGGGAGTCACATCGCTTTGGGGAT...TGGGGTGTTTGGGATCTGGTCTGAGGGGGCGGACGGCACTGATATCAACGCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000586195.5
ENST00000588308.5
CDS-3UTR TCA 90 bp ATGTCAGTCTACCCTCCCGCCCCCATAACCCCCTCTGCTATAGACATACTCTGGGGCGAGGCGCTCTGGTaGCAAGTAGCGGCGGACACT +
Preference number: 4 (lower is better)
Translates to: MSVYPPAPITPSAIDILWGEALW*QVAADT
Trigger: AGTGTCCGCCGCTACTTGTCACCAGAGCGCCTCGCC...CCAGAGTATGTCTATAGCAGAGGGGGTTATGGGGGCGGGAGGGTAGACTGACAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000536630.5
ENST00000587152.6
CDS-3UTR TCA 90 bp CCCTGTCAGGACTGGCTGAGAAGGCATCACATGCTGGGGTCTTCACAGCCCGCATCTGGCTGGATCACCTaGGGTCAGGAGTTCGAGACC +
Preference number: 4 (lower is better)
Translates to: PCQDWLRRHHMLGSSQPASGWIT*GQEFET
Trigger: GGTCTCGAACTCCTGACCTCAGGTGATCCAGCCAGA...TGCGGGCTGTGAAGACCCCAGCATGTGATGCCTTCTCAGCCAGTCCTGACAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586405.1
CDS-3UTR TCA 90 bp CCCTGTCAGGACTGGCTGAGAAGGCATCACATGCTGGGGTCTTCACAGCCCGCACCTGTCAGGACTGGCTaGGAAGGCATCACATGCTGG +
Preference number: 4 (lower is better)
Translates to: PCQDWLRRHHMLGSSQPAPVRTG*EGITCW
Trigger: CCAGCATGTGATGCCTTCTCAGCCAGTCCTGACAGG...TGCGGGCTGTGAAGACCCCAGCATGTGATGCCTTCTCAGCCAGTCCTGACAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586405.1
CDS-3UTR GCA 90 bp TGTCTCCGTGGCCCTCTGCCACGGTGCGCACAGGGCCAAAGTCCTCAGGGACCTTACGGTTCCCACCTTTaGCCCAAACATAGAGGTTCC +
Preference number: 4 (lower is better)
Translates to: CLRGPLPRCAQGQSPQGPYGSHL*PKHRGS
Trigger: GGAACCTCTATGTTTGGGGCAAAGGTGGGAACCGTA...AGGTCCCTGAGGACTTTGGCCCTGTGCGCACCGTGGCAGAGGGCCACGGAGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586195.5
CDS-3UTR GCA 90 bp CAGCAACTTCCCATCATGAGAGCGGGCCACAGCGTTGATATCAGTGCCGTCCGCGTGTGCACGGAGCCCTaGAGGATGGAATTGCGGGTG +
Preference number: 4 (lower is better)
Translates to: QQLPIMRAGHSVDISAVRVCTEP*RMELRV
Trigger: CACCCGCAATTCCATCCTGCAGGGCTCCGTGCACAC...GCGGACGGCACTGATATCAACGCTGTGGCCCGCTCTCATGATGGGAAGTTGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586195.5
ENST00000588308.5
CDS-3UTR GCA 90 bp CTGAGCTCCATAGATGCACCAGCTTATCCTGCCCGCAGGTCACAAACTGGGCCCGTGTGCACGGAGCCCTaGAGGATGGAATTGCGGGTG +
Preference number: 4 (lower is better)
Translates to: LSSIDAPAYPARRSQTGPVCTEP*RMELRV
Trigger: CACCCGCAATTCCATCCTGCAGGGCTCCGTGCACAC...GGGCCCAGTTTGTGACCTGCGGGCAGGATAAGCTGGTGCATCTATGGAGCTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586195.5
ENST00000590819.5
CDS-3UTR GCA 90 bp CCAGGTCATGGGTCTCCGTGTCCAGCAGCAGCCATCTGCCAGTCACTGTACCCAAGTGAGAAGCCTGTGTaGACGGAGCCCTGCAGGATG +
Preference number: 4 (lower is better)
Translates to: PGHGSPCPAAAICQSLYPSEKPV*TEPCRM
Trigger: CATCCTGCAGGGCTCCGTGCACACAGGCTTCTCACT...TGGGTACAGTGACTGGCAGATGGCTGCTGCTGGACACGGAGACCCATGACCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399594.7
ENST00000586195.5
ENST00000590819.5
CDS-3UTR GCA 90 bp CTGACTCTTCCCTGGCCGCATCAGACCACCCGCCACTGTAGCACACTGGTGTCCTGCACCAGCTTATCCTaGCCGCAGGTCACAAACTGG +
Preference number: 4 (lower is better)
Translates to: LTLPWPHQTTRHCSTLVSCTSLS*PQVTNW
Trigger: CCAGTTTGTGACCTGCGGGCAGGATAAGCTGGTGCA...GGACACCAGTGTGCTACAGTGGCGGGTGGTCTGATGCGGCCAGGGAAGAGTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586195.5
ENST00000588308.5
CDS-3UTR GCA 90 bp TGGCCGCATCAGACCACCCGCCACTGTAGCACACTGGTGTCCTTGCCCCCTGTGTCTGAGCTCCATAGATaGACCAGCTTATCCTGCCCG +
Preference number: 4 (lower is better)
Translates to: WPHQTTRHCSTLVSLPPVSELHR*TSLSCP
Trigger: CGGGCAGGATAAGCTGGTGCATCTATGGAGCTCAGA...CACAGGGGGCAAGGACACCAGTGTGCTACAGTGGCGGGTGGTCTGATGCGGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586195.5
ENST00000588308.5
CDS-3UTR GCA 90 bp CACAGCGTTGATATCAGTGCCGTCCGCCCCCTCAGACCAGATCCCAAACACCCCCCAGCAGCAGCCATCTaGCAGTCACTGTACCCACAG +
Preference number: 4 (lower is better)
Translates to: HSVDISAVRPLRPDPKHPPAAAI*QSLYPQ
Trigger: CTGTGGGTACAGTGACTGGCAGATGGCTGCTGCTGG...GGGGTGTTTGGGATCTGGTCTGAGGGGGCGGACGGCACTGATATCAACGCTGTG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000586195.5
CDS-3UTR GCA 90 bp CACAGCGTTGATATCAGTGCCGTCCGCCCCCTCAGACCAGATCCCAAACACCCCTCCGCACTGGTGATCTaGTTACAGGTAGCCGGGTCC +
Preference number: 4 (lower is better)
Translates to: HSVDISAVRPLRPDPKHPSALVI*LQVAGS
Trigger: GGACCCGGCTACCTGTAAGCAGATCACCAGTGCGGA...GGGGTGTTTGGGATCTGGTCTGAGGGGGCGGACGGCACTGATATCAACGCTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000586195.5
ENST00000586405.1
ENST00000588308.5
CDS-3UTR GCA 90 bp ACGTACACCAAGTTGTCGTGGGAGCCCACGGCCAGGTACGCCCCGTCTGGGGAGTCCAGTCCCACACTCTaGCCTCAACTCAACACCAAA +
Preference number: 4 (lower is better)
Translates to: TYTKLSWEPTARYAPSGESSPTL*PQLNTK
Trigger: TTTGGTGTTGAGTTGAGGGCAGAGTGTGGGACTGGA...CTCCCCAGACGGGGCGTACCTGGCCGTGGGCTCCCACGACAACTTGGTGTACGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399594.7
CDS-3UTR CCA 90 bp CTGCTGTCCTGGGCCCAATCCAGGTGGGTGATAAAACTGGAATGGCCCTGGGGAGGGTGCCAGCTCGTCTaGGATCATCATGGGCACAGG +
Preference number: 4 (lower is better)
Translates to: LLSWAQSRWVIKLEWPWGGCQLV*DHHGHR
Trigger: CCTGTGCCCATGATGATCCCAGACGAGCTGGCACCC...TCCCCAGGGCCATTCCAGTTTTATCACCCACCTGGATTGGGCCCAGGACAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588308.5
CDS-3UTR CCA 90 bp ATAGTCCCCGGAGTTGGTGACAAAGCAGCTGCTGTCCTGGGCCCAATCCAGGTGTGTCCAGGCTGTAGGTaGGTGCCAGCTCGTCTGGGA +
Preference number: 4 (lower is better)
Translates to: IVPGVGDKAAAVLGPIQVCPGCR*VPARLG
Trigger: TCCCAGACGAGCTGGCACCCACCTACAGCCTGGACA...CACCTGGATTGGGCCCAGGACAGCAGCTGCTTTGTCACCAACTCCGGGGACTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588308.5
CDS-3UTR CCA 90 bp GTCATGGGTCTCCGTGTCCAGCAGCAGCCATCTGCCAGTCACTGTACCCACAGCGCAGCAAATAAAGGTTaGCCCGGCAGTCTCGGCCAC +
Preference number: 4 (lower is better)
Translates to: VMGLRVQQQPSASHCTHSAANKG*PGSLGH
Trigger: GTGGCCGAGACTGCCGGGCCAACCTTTATTTGCTGC...GCTGTGGGTACAGTGACTGGCAGATGGCTGCTGCTGGACACGGAGACCCATGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399594.7
CDS-3UTR CCA 90 bp ACCCCAAACCAAACACCAATGGATCCCCAAAGCGATGTGACTCCCTCTTCCCACTCCCAGATGCGCACGTaGGGCGGCAGCGGCTTCCCT +
Preference number: 4 (lower is better)
Translates to: TPNQTPMDPQSDVTPSSHSQMRT*GGSGFP
Trigger: AGGGAAGCCGCTGCCGCCCCACGTGCGCATCTGGGA...GTGGGAAGAGGGAGTCACATCGCTTTGGGGATCCATTGGTGTTTGGTTTGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CCA 90 bp TCCCCCGTGACCACGTCGCCACCTTCCAAAAAGGTCACACACAGCACATACTTCGCACAGTGGGGTCCGTaGGGTGGAAGGTGGCCACCA +
Preference number: 4 (lower is better)
Translates to: SPVTTSPPSKKVTHSTYFAQWGP*GGRWPP
Trigger: TGGTGGCCACCTTCCACCCCACGGACCCCACTGTGC...GAAGTATGTGCTGTGTGTGACCTTTTTGGAAGGTGGCGACGTGGTCACGGGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000586195.5
ENST00000592853.5
CDS-3UTR CCA 90 bp ATGTCAGTCTACCCTCCCGCCCCCATAACCCCCTCTGCTATAGACATACTCTGGACAGAGCCACTGGGGTaGAAGCCGGCTGAGCGGGCA +
Preference number: 4 (lower is better)
Translates to: MSVYPPAPITPSAIDILWTEPLG*KPAERA
Trigger: TGCCCGCTCAGCCGGCTTCCACCCCAGTGGCTCTGT...CCAGAGTATGTCTATAGCAGAGGGGGTTATGGGGGCGGGAGGGTAGACTGACAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
CDS-3UTR CCA 90 bp TTCCCTGGCCGCATCAGACCACCCGCCACTGTAGCACACTGGTGTCCTTGCCCCGCCACATTTGTCACATaGCTGCTGTGTCCACCGTAC +
Preference number: 4 (lower is better)
Translates to: FPGRIRPPATVAHWCPCPATFVT*LLCPPY
Trigger: GTACGGTGGACACAGCAGCCATGTGACAAATGTGGC...GGGGCAAGGACACCAGTGTGCTACAGTGGCGGGTGGTCTGATGCGGCCAGGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586195.5
ENST00000588308.5
CDS-3UTR CCA 90 bp ACTGGTGTCCTTGCCCCCTGTGGTCAGGGCCATGCTGTCATCCCACAAGAAGGCTGTCCTTGCCCCCTGTaGTCAGGGCCATGCTGTCAT +
Preference number: 4 (lower is better)
Translates to: TGVLAPCGQGHAVIPQEGCPCPL*SGPCCH
Trigger: ATGACAGCATGGCCCTGACCACAGGGGGCAAGGACA...GCCTTCTTGTGGGATGACAGCATGGCCCTGACCACAGGGGGCAAGGACACCAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000586195.5
ENST00000588308.5
CDS-3UTR CCA 90 bp CAATCCAGGTGGGTGATAAAACTGGAATGGCCCGAGCACTTGCCCAGGCGGCTGGCCACTGTAGCACACTaGTGTCCTTGCCCCCTGTGG +
Preference number: 4 (lower is better)
Translates to: QSRWVIKLEWPEHLPRRLATVAH*CPCPLW
Trigger: CCACAGGGGGCAAGGACACCAGTGTGCTACAGTGGC...CAGCCGCCTGGGCAAGTGCTCGGGCCATTCCAGTTTTATCACCCACCTGGATTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586195.5
CDS-3UTR CCA 90 bp TACCCTCCCGCCCCCATAACCCCCTCTGCTATAGACATACTCTGGGTATATATTCCAGCTCAGCTCGCCTaGCATCAGGCGGCCGGCGCC +
Preference number: 4 (lower is better)
Translates to: YPPAPITPSAIDILWVYIPAQLA*HQAAGA
Trigger: GGCGCCGGCCGCCTGATGCCAGGCGAGCTGAGCTGG...AATATATACCCAGAGTATGTCTATAGCAGAGGGGGTTATGGGGGCGGGAGGGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000587152.6
CDS-3UTR TCA 90 bp ATGTCAGTCTACCCTCCCGCCCCCATAACCCCCTCTGCTATAGACATACTCTGGGCCCTGGACCAGCAGTaGGAAGCCTGTGTGCACGGA +
Preference number: 4 (lower is better)
Translates to: MSVYPPAPITPSAIDILWALDQQ*EACVHG
Trigger: TCCGTGCACACAGGCTTCTCACTGCTGGTCCAGGGC...CCAGAGTATGTCTATAGCAGAGGGGGTTATGGGGGCGGGAGGGTAGACTGACAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR TCA 90 bp TTCCATGTTCCTCACAGCATCCGCACTGGTGATCTGCTTACAGGTAGCCGGGTCGCCCTGGACCAGCAGTaGGAAGCCTGTGTGCACGGA +
Preference number: 4 (lower is better)
Translates to: FHVPHSIRTGDLLTGSRVALDQQ*EACVHG
Trigger: TCCGTGCACACAGGCTTCTCACTGCTGGTCCAGGGC...GACCCGGCTACCTGTAAGCAGATCACCAGTGCGGATGCTGTGAGGAACATGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586195.5
ENST00000588308.5
CDS-3UTR TCA 90 bp ACCCCAAACCAAACACCAATGGATCCCCAAAGCGATGTGACTCCCTCTTCCCACGGGCAGGGTCCTCGATaGTCCTGCTCCACAGGGGCT +
Preference number: 4 (lower is better)
Translates to: TPNQTPMDPQSDVTPSSHGQGPR*SCSTGA
Trigger: AGCCCCTGTGGAGCAGGATCATCGAGGACCCTGCCC...GTGGGAAGAGGGAGTCACATCGCTTTGGGGATCCATTGGTGTTTGGTTTGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
CDS-3UTR TCA 90 bp AAACACCCCAAACCAAACACCAATGGATCCCCAAAGCGATGTGACTCCCTCTTCGGGGTGGAAGCCGGCTaGGCGGGCAGGGTCCTCGAT +
Preference number: 4 (lower is better)
Translates to: KHPKPNTNGSPKRCDSLFGVEAG*AGRVLD
Trigger: ATCGAGGACCCTGCCCGCTCAGCCGGCTTCCACCCC...GAAGAGGGAGTCACATCGCTTTGGGGATCCATTGGTGTTTGGTTTGGGGTGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
CDS-3UTR TCA 90 bp CCTGCAGGATGGAATTGCGGGTGGTCCCCACGTACAGTGTGTCTCCGTGGCCCTGGAGAAGCTGACCACTaGGATCTGTTCATTGCCGTC +
Preference number: 4 (lower is better)
Translates to: PAGWNCGWSPRTVCLRGPGEADH*DLFIAV
Trigger: GACGGCAATGAACAGATCTCAGTGGTCAGCTTCTCC...AGGGCCACGGAGACACACTGTACGTGGGGACCACCCGCAATTCCATCCTGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586195.5
ENST00000590819.5
CDS-3UTR TCA 90 bp AAACACCCCAAACCAAACACCAATGGATCCCCAAAGCGATGTGACTCCCTCTTCACTTGCCCAGGCGGCTaGCCTTGCGGCCGCCCTGGT +
Preference number: 4 (lower is better)
Translates to: KHPKPNTNGSPKRCDSLFTCPGG*PCGRPG
Trigger: ACCAGGGCGGCCGCAAGGTCAGCCGCCTGGGCAAGT...GAAGAGGGAGTCACATCGCTTTGGGGATCCATTGGTGTTTGGTTTGGGGTGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
CDS-3UTR TCA 90 bp TACCCTCCCGCCCCCATAACCCCCTCTGCTATAGACATACTCTGGGTATATATTACTTGCCCAGGCGGCTaGCCTTGCGGCCGCCCTGGT +
Preference number: 4 (lower is better)
Translates to: YPPAPITPSAIDILWVYITCPGG*PCGRPG
Trigger: ACCAGGGCGGCCGCAAGGTCAGCCGCCTGGGCAAGT...AATATATACCCAGAGTATGTCTATAGCAGAGGGGGTTATGGGGGCGGGAGGGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
CDS-3UTR TCA 90 bp ACCCCAAACCAAACACCAATGGATCCCCAAAGCGATGTGACTCCCTCTTCCCACAGCGGGCCACAGCGTTaGTATCAGTGCCGTCCGCCC +
Preference number: 4 (lower is better)
Translates to: TPNQTPMDPQSDVTPSSHSGPQR*YQCRPP
Trigger: GGGCGGACGGCACTGATATCAACGCTGTGGCCCGCT...GTGGGAAGAGGGAGTCACATCGCTTTGGGGATCCATTGGTGTTTGGTTTGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR GCA 90 bp AGCCACTGGGGTGGAAGCCGGCTGAGCGGGCAGGGTCCTGTAATCCCAGCTACTTACGGTTCCCACCTTTaGCCCAAACATAGAGGTTCC +
Preference number: 4 (lower is better)
Translates to: SHWGGSRLSGQGPVIPATYGSHL*PKHRGS
Trigger: GGAACCTCTATGTTTGGGGCAAAGGTGGGAACCGTA...AGTAGCTGGGATTACAGGACCCTGCCCGCTCAGCCGGCTTCCACCCCAGTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399594.7
CDS-3UTR GCA 90 bp TACCCTCCCGCCCCCATAACCCCCTCTGCTATAGACATACTCTGGGTATATATTGTCTCCGTGGCCCTCTaGCACGGTGCGCACAGGGCC +
Preference number: 4 (lower is better)
Translates to: YPPAPITPSAIDILWVYIVSVAL*HGAHRA
Trigger: GGCCCTGTGCGCACCGTGGCAGAGGGCCACGGAGAC...AATATATACCCAGAGTATGTCTATAGCAGAGGGGGTTATGGGGGCGGGAGGGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR GCA 90 bp CTTGCCCCCTGTGGTCAGGGCCATGCTGTCATCCCACAAGAAGGCCACATTTGTGTGTGCACGGAGCCCTaGAGGATGGAATTGCGGGTG +
Preference number: 4 (lower is better)
Translates to: LAPCGQGHAVIPQEGHICVCTEP*RMELRV
Trigger: CACCCGCAATTCCATCCTGCAGGGCTCCGTGCACAC...ACAAATGTGGCCTTCTTGTGGGATGACAGCATGGCCCTGACCACAGGGGGCAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586195.5
ENST00000588308.5
CDS-3UTR GCA 90 bp CTGCTGTCCTGGGCCCAATCCAGGTGGGTGATAAAACTGGAATGGCCCTGGGGATCCGCACTGGTGATCTaGTTACAGGTAGCCGGGTCC +
Preference number: 4 (lower is better)
Translates to: LLSWAQSRWVIKLEWPWGSALVI*LQVAGS
Trigger: GGACCCGGCTACCTGTAAGCAGATCACCAGTGCGGA...TCCCCAGGGCCATTCCAGTTTTATCACCCACCTGGATTGGGCCCAGGACAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588308.5
CDS-3UTR GCA 90 bp CAAGTTGTCGTGGGAGCCCACGGCCAGGTACGCCCCGTCTGGGGAGAAGCTGACCATTTGTCACATGGCTaGTGTGTCCACCGTACTTGT +
Preference number: 4 (lower is better)
Translates to: QVVVGAHGQVRPVWGEADHLSHG*CVHRTC
Trigger: ACAAGTACGGTGGACACAGCAGCCATGTGACAAATG...GTCAGCTTCTCCCCAGACGGGGCGTACCTGGCCGTGGGCTCCCACGACAACTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586195.5
CDS-3UTR CCA 90 bp TACACGTACACCAAGTTGTCGTGGGAGCCCACGGCCAGGTACGCCCCGTCTGGGACACTATCTCCCCGGTaGGCAGCAAATAAAGGTTGG +
Preference number: 4 (lower is better)
Translates to: YTYTKLSWEPTARYAPSGTLSPR*AANKGW
Trigger: CCAACCTTTATTTGCTGCCCACCGGGGAGATAGTGT...CCCAGACGGGGCGTACCTGGCCGTGGGCTCCCACGACAACTTGGTGTACGTGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399594.7
CDS-3UTR CCA 90 bp GCCACTGTAGCACACTGGTGTCCTTGCCCCCTGTGGTCAGGGCCATGCTGTCATCCAGCACGTGTAAGGTaGAGAGGGAAACTGAGTCCC +
Preference number: 4 (lower is better)
Translates to: ATVAHWCPCPLWSGPCCHPARVR*RGKLSP
Trigger: GGGACTCAGTTTCCCTCTCCACCTTACACGTGCTGG...ATGACAGCATGGCCCTGACCACAGGGGGCAAGGACACCAGTGTGCTACAGTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586195.5
ENST00000588308.5
CDS-3UTR CCA 90 bp ATGTCAGTCTACCCTCCCGCCCCCATAACCCCCTCTGCTATAGACATACTCTGGTACAGTGTGTCTCCGTaGCCCTCTGCCACGGTGCGC +
Preference number: 4 (lower is better)
Translates to: MSVYPPAPITPSAIDILWYSVSP*PSATVR
Trigger: GCGCACCGTGGCAGAGGGCCACGGAGACACACTGTA...CCAGAGTATGTCTATAGCAGAGGGGGTTATGGGGGCGGGAGGGTAGACTGACAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CCA 90 bp AAAGCAGCTGCTGTCCTGGGCCCAATCCAGGTGGGTGATAAAACTGGAATGGCCCGGAGCCCTGCAGGATaGAATTGCGGGTGGTCCCCA +
Preference number: 4 (lower is better)
Translates to: KAAAVLGPIQVGDKTGMARSPAG*NCGWSP
Trigger: TGGGGACCACCCGCAATTCCATCCTGCAGGGCTCCG...GGCCATTCCAGTTTTATCACCCACCTGGATTGGGCCCAGGACAGCAGCTGCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586195.5
ENST00000588308.5
CDS-3UTR CCA 90 bp TTCCATGTTCCTCACAGCATCCGCACTGGTGATCTGCTTACAGGTAGCCGGGTCCGGAGCCCTGCAGGATaGAATTGCGGGTGGTCCCCA +
Preference number: 4 (lower is better)
Translates to: FHVPHSIRTGDLLTGSRVRSPAG*NCGWSP
Trigger: TGGGGACCACCCGCAATTCCATCCTGCAGGGCTCCG...GACCCGGCTACCTGTAAGCAGATCACCAGTGCGGATGCTGTGAGGAACATGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586195.5
ENST00000588308.5
CDS-3UTR CCA 90 bp CACAGCGTTGATATCAGTGCCGTCCGCCCCCTCAGACCAGATCCCAAACACCCCCTCCACAGGGGCTGGTaGGAATCTGAGCTCCATAGA +
Preference number: 4 (lower is better)
Translates to: HSVDISAVRPLRPDPKHPLHRGW*ESELHR
Trigger: TCTATGGAGCTCAGATTCCCACCAGCCCCTGTGGAG...GGGGTGTTTGGGATCTGGTCTGAGGGGGCGGACGGCACTGATATCAACGCTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000586195.5
ENST00000588308.5
CDS-3UTR CCA 90 bp GATGCACCAGCTTATCCTGCCCGCAGGTCACAAACTGGGCCCGACTGGGGTGTGTCATTGCCGTCTGTGTaGATAGCCACCAGGTCATGG +
Preference number: 4 (lower is better)
Translates to: DAPAYPARRSQTGPDWGVSLPSV*IATRSW
Trigger: CCATGACCTGGTGGCTATCCACACAGACGGCAATGA...CACACCCCAGTCGGGCCCAGTTTGTGACCTGCGGGCAGGATAAGCTGGTGCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586195.5
ENST00000590819.5
CDS-3UTR CCA 90 bp CTGAGCTCCATAGATGCACCAGCTTATCCTGCCCGCAGGTCACAAACTGGGCCCTACACCAAGTTGTCGTaGGAGCCCACGGCCAGGTAC +
Preference number: 4 (lower is better)
Translates to: LSSIDAPAYPARRSQTGPYTKLS*EPTARY
Trigger: GTACCTGGCCGTGGGCTCCCACGACAACTTGGTGTA...GGGCCCAGTTTGTGACCTGCGGGCAGGATAAGCTGGTGCATCTATGGAGCTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586195.5
ENST00000590819.5
CDS-3UTR CCA 90 bp ATGTCAGTCTACCCTCCCGCCCCCATAACCCCCTCTGCTATAGACATACTCTGGACCTTGCGGCCGCCCTaGTCCACCGTGTACACGTAC +
Preference number: 4 (lower is better)
Translates to: MSVYPPAPITPSAIDILWTLRPP*STVYTY
Trigger: GTACGTGTACACGGTGGACCAGGGCGGCCGCAAGGT...CCAGAGTATGTCTATAGCAGAGGGGGTTATGGGGGCGGGAGGGTAGACTGACAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
CDS-3UTR CCA 90 bp TTCCATGTTCCTCACAGCATCCGCACTGGTGATCTGCTTACAGGTAGCCGGGTCCACCTGACTCTTCCCTaGCCGCATCAGACCACCCGC +
Preference number: 4 (lower is better)
Translates to: FHVPHSIRTGDLLTGSRVHLTLP*PHQTTR
Trigger: GCGGGTGGTCTGATGCGGCCAGGGAAGAGTCAGGTG...GACCCGGCTACCTGTAAGCAGATCACCAGTGCGGATGCTGTGAGGAACATGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586195.5
ENST00000588308.5
CDS-3UTR CCA 90 bp AAACCAAACACCAATGGATCCCCAAAGCGATGTGACTCCCTCTTCCCACCCGGAGACACACCGAGGCAGTaGTGCCTAAGCGCGGAGGCG +
Preference number: 4 (lower is better)
Translates to: KPNTNGSPKRCDSLFPPGDTPRQ*CLSAEA
Trigger: CGCCTCCGCGCTTAGGCACCACTGCCTCGGTGTGTC...TCCGGGTGGGAAGAGGGAGTCACATCGCTTTGGGGATCCATTGGTGTTTGGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536630.5
ENST00000587152.6
CDS-3UTR CCA 90 bp TTGTCGTGGGAGCCCACGGCCAGGTACGCCCCGTCTGGGGAGAAGCTGACCACTTTTTGCCTTCCTTTTTaGCGCTACAGTTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: LSWEPTARYAPSGEKLTTFCLPF*RYSCCW
Trigger: CCAGCAGCAACTGTAGCGCCAAAAAGGAAGGCAAAA...AGTGGTCAGCTTCTCCCCAGACGGGGCGTACCTGGCCGTGGGCTCCCACGACAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000399594.7
CDS-3UTR CCA 90 bp CCCTGTCAGGACTGGCTGAGAAGGCATCACATGCTGGGGTCTTCACAGCCCGCAGTCCCCTGTCAGGACTaGCTGAGAAGGCATCACATG +
Preference number: 4 (lower is better)
Translates to: PCQDWLRRHHMLGSSQPAVPCQD*LRRHHM
Trigger: CATGTGATGCCTTCTCAGCCAGTCCTGACAGGGGAC...TGCGGGCTGTGAAGACCCCAGCATGTGATGCCTTCTCAGCCAGTCCTGACAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586405.1
CDS-3UTR TCA 90 bp ATGTCAGTCTACCCTCCCGCCCCCATAACCCCCTCTGCTATAGACATACTCTGGGTCCCGTGGCGATGGTaGCCATATCTGGGTGGATGG +
Preference number: 4 (lower is better)
Translates to: MSVYPPAPITPSAIDILWVPWRW*PYLGGW
Trigger: CCATCCACCCAGATATGGTCACCATCGCCACGGGAC...CCAGAGTATGTCTATAGCAGAGGGGGTTATGGGGGCGGGAGGGTAGACTGACAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR TCA 90 bp TTCCATGTTCCTCACAGCATCCGCACTGGTGATCTGCTTACAGGTAGCCGGGTCGTCCCGTGGCGATGGTaGCCATATCTGGGTGGATGG +
Preference number: 4 (lower is better)
Translates to: FHVPHSIRTGDLLTGSRVVPWRW*PYLGGW
Trigger: CCATCCACCCAGATATGGTCACCATCGCCACGGGAC...GACCCGGCTACCTGTAAGCAGATCACCAGTGCGGATGCTGTGAGGAACATGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586195.5
ENST00000588308.5
CDS-3UTR TCA 90 bp ATGTCAGTCTACCCTCCCGCCCCCATAACCCCCTCTGCTATAGACATACTCTGGGGTGGAGAGGGAAACTaGGTCCCAGATGCGCACGTG +
Preference number: 4 (lower is better)
Translates to: MSVYPPAPITPSAIDILWGGEGN*VPDAHV
Trigger: CACGTGCGCATCTGGGACTCAGTTTCCCTCTCCACC...CCAGAGTATGTCTATAGCAGAGGGGGTTATGGGGGCGGGAGGGTAGACTGACAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR TCA 90 bp TCCCCCGTGACCACGTCGCCACCTTCCAAAAAGGTCACACACAGCACATACTTCGGTGGAGAGGGAAACTaGGTCCCAGATGCGCACGTG +
Preference number: 4 (lower is better)
Translates to: SPVTTSPPSKKVTHSTYFGGEGN*VPDAHV
Trigger: CACGTGCGCATCTGGGACTCAGTTTCCCTCTCCACC...GAAGTATGTGCTGTGTGTGACCTTTTTGGAAGGTGGCGACGTGGTCACGGGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000586195.5
ENST00000592853.5
CDS-3UTR TCA 90 bp TGGCCGCATCAGACCACCCGCCACTGTAGCACACTGGTGTCCTTGCCCCCTGTGCACACCGAGAGCATGTaGTCATTGGATTCATCCACT +
Preference number: 4 (lower is better)
Translates to: WPHQTTRHCSTLVSLPPVHTESM*SLDSST
Trigger: AGTGGATGAATCCAATGATCACATGCTCTCGGTGTG...CACAGGGGGCAAGGACACCAGTGTGCTACAGTGGCGGGTGGTCTGATGCGGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586195.5
ENST00000588308.5
CDS-3UTR TCA 90 bp AAACACCCCAAACCAAACACCAATGGATCCCCAAAGCGATGTGACTCCCTCTTCCCCCAGAGTCCCCCGTaGCCACGTCGCCACCTTCCA +
Preference number: 4 (lower is better)
Translates to: KHPKPNTNGSPKRCDSLFPQSPP*PRRHLP
Trigger: TGGAAGGTGGCGACGTGGTCACGGGGGACTCTGGGG...GAAGAGGGAGTCACATCGCTTTGGGGATCCATTGGTGTTTGGTTTGGGGTGTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR TCA 90 bp TACCCTCCCGCCCCCATAACCCCCTCTGCTATAGACATACTCTGGGTATATATTCCCCAGAGTCCCCCGTaGCCACGTCGCCACCTTCCA +
Preference number: 4 (lower is better)
Translates to: YPPAPITPSAIDILWVYIPQSPP*PRRHLP
Trigger: TGGAAGGTGGCGACGTGGTCACGGGGGACTCTGGGG...AATATATACCCAGAGTATGTCTATAGCAGAGGGGGTTATGGGGGCGGGAGGGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR TCA 90 bp GGTCAGGGCCATGCTGTCATCCCACAAGAAGGCCACATTTGTCACATGGCTGCTCCAGCACCGCCTGTGTaGTACGGTTCCCACCTTTGC +
Preference number: 4 (lower is better)
Translates to: GQGHAVIPQEGHICHMAAPAPPV*YGSHLC
Trigger: GCAAAGGTGGGAACCGTATCACACAGGCGGTGCTGG...AGCAGCCATGTGACAAATGTGGCCTTCTTGTGGGATGACAGCATGGCCCTGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586195.5
ENST00000588308.5
CDS-3UTR TCA 90 bp ACCCCAAACCAAACACCAATGGATCCCCAAAGCGATGTGACTCCCTCTTCCCACGCCCTGGACCAGCAGTaGGAAGCCTGTGTGCACGGA +
Preference number: 4 (lower is better)
Translates to: TPNQTPMDPQSDVTPSSHALDQQ*EACVHG
Trigger: TCCGTGCACACAGGCTTCTCACTGCTGGTCCAGGGC...GTGGGAAGAGGGAGTCACATCGCTTTGGGGATCCATTGGTGTTTGGTTTGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR TCA 90 bp AAACCAAACACCAATGGATCCCCAAAGCGATGTGACTCCCTCTTCCCACCCGGAGCCCTGGACCAGCAGTaGGAAGCCTGTGTGCACGGA +
Preference number: 4 (lower is better)
Translates to: KPNTNGSPKRCDSLFPPGALDQQ*EACVHG
Trigger: TCCGTGCACACAGGCTTCTCACTGCTGGTCCAGGGC...TCCGGGTGGGAAGAGGGAGTCACATCGCTTTGGGGATCCATTGGTGTTTGGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR TCA 90 bp CCCGCCCCCATAACCCCCTCTGCTATAGACATACTCTGGGTATATATTACTCTAGGGGTGGAAGCCGGCTaGGCGGGCAGGGTCCTCGAT +
Preference number: 4 (lower is better)
Translates to: PAPITPSAIDILWVYITLGVEAG*AGRVLD
Trigger: ATCGAGGACCCTGCCCGCTCAGCCGGCTTCCACCCC...TAGAGTAATATATACCCAGAGTATGTCTATAGCAGAGGGGGTTATGGGGGCGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
CDS-3UTR TCA 90 bp CCAGGTCATGGGTCTCCGTGTCCAGCAGCAGCCATCTGCCAGTCACTGTACCCAGGAGAAGCTGACCACTaGGATCTGTTCATTGCCGTC +
Preference number: 4 (lower is better)
Translates to: PGHGSPCPAAAICQSLYPGEADH*DLFIAV
Trigger: GACGGCAATGAACAGATCTCAGTGGTCAGCTTCTCC...TGGGTACAGTGACTGGCAGATGGCTGCTGCTGGACACGGAGACCCATGACCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000399594.7
ENST00000586195.5
ENST00000590819.5
CDS-3UTR TCA 90 bp GGTCAGGGCCATGCTGTCATCCCACAAGAAGGCCACATTTGTCACATGGCTGCTCAGCAGCCATCTCGATaGTCCTGCTCCACAGGGGCT +
Preference number: 4 (lower is better)
Translates to: GQGHAVIPQEGHICHMAAQQPSR*SCSTGA
Trigger: AGCCCCTGTGGAGCAGGATCATCGAGATGGCTGCTG...AGCAGCCATGTGACAAATGTGGCCTTCTTGTGGGATGACAGCATGGCCCTGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588308.5
CDS-3UTR GCA 90 bp GCTGGTGGGAATCTGAGCTCCATAGATGCACCAGCTTATCCTGCCCGCAGGTCACCTGCAGGATGGAATTaGGGGTGGTCCCCACGTACA +
Preference number: 4 (lower is better)
Translates to: AGGNLSSIDAPAYPARRSPAGWN*GWSPRT
Trigger: TGTACGTGGGGACCACCCGCAATTCCATCCTGCAGG...TGACCTGCGGGCAGGATAAGCTGGTGCATCTATGGAGCTCAGATTCCCACCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586195.5
ENST00000590819.5
CDS-3UTR GCA 90 bp ATGTCAGTCTACCCTCCCGCCCCCATAACCCCCTCTGCTATAGACATACTCTGGGTGTGCACGGAGCCCTaGAGGATGGAATTGCGGGTG +
Preference number: 4 (lower is better)
Translates to: MSVYPPAPITPSAIDILWVCTEP*RMELRV
Trigger: CACCCGCAATTCCATCCTGCAGGGCTCCGTGCACAC...CCAGAGTATGTCTATAGCAGAGGGGGTTATGGGGGCGGGAGGGTAGACTGACAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR GCA 90 bp GTACTTGTGGCTGAGGGCTCGAGGCTGACAGCAGGGGTAGCTAAACAGGTGAACAGTGAGAAGCCTGTGTaGACGGAGCCCTGCAGGATG +
Preference number: 4 (lower is better)
Translates to: VLVAEGSRLTAGVAKQVNSEKPV*TEPCRM
Trigger: CATCCTGCAGGGCTCCGTGCACACAGGCTTCTCACT...GTTCACCTGTTTAGCTACCCCTGCTGTCAGCCTCGAGCCCTCAGCCACAAGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586195.5
ENST00000588308.5
CDS-3UTR GCA 90 bp CTGAGCTCCATAGATGCACCAGCTTATCCTGCCCGCAGGTCACAAACTGGGCCCTGCACCAGCTTATCCTaGCCGCAGGTCACAAACTGG +
Preference number: 4 (lower is better)
Translates to: LSSIDAPAYPARRSQTGPCTSLS*PQVTNW
Trigger: CCAGTTTGTGACCTGCGGGCAGGATAAGCTGGTGCA...GGGCCCAGTTTGTGACCTGCGGGCAGGATAAGCTGGTGCATCTATGGAGCTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586195.5
ENST00000590819.5
CDS-3UTR GCA 90 bp CTTGCCCCCTGTGGTCAGGGCCATGCTGTCATCCCACAAGAAGGCCACATTTGTTCCGCACTGGTGATCTaGTTACAGGTAGCCGGGTCC +
Preference number: 4 (lower is better)
Translates to: LAPCGQGHAVIPQEGHICSALVI*LQVAGS
Trigger: GGACCCGGCTACCTGTAAGCAGATCACCAGTGCGGA...ACAAATGTGGCCTTCTTGTGGGATGACAGCATGGCCCTGACCACAGGGGGCAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586195.5
ENST00000588308.5
CDS-3UTR GCA 90 bp GTCATGGGTCTCCGTGTCCAGCAGCAGCCATCTGCCAGTCACTGTACCCACAGCGTCCTCAGGGACCTTTaGCCCAAACATAGAGGTTCC +
Preference number: 4 (lower is better)
Translates to: VMGLRVQQQPSASHCTHSVLRDL*PKHRGS
Trigger: GGAACCTCTATGTTTGGGGCAAAGGTCCCTGAGGAC...GCTGTGGGTACAGTGACTGGCAGATGGCTGCTGCTGGACACGGAGACCCATGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590819.5
CDS-3UTR CCA 90 bp ATGTCAGTCTACCCTCCCGCCCCCATAACCCCCTCTGCTATAGACATACTCTGGCTCCAAAGCTACTCATaGCGGCGGGTGGCGGAGCTT +
Preference number: 4 (lower is better)
Translates to: MSVYPPAPITPSAIDILWLQSYS*RRVAEL
Trigger: AAGCTCCGCCACCCGCCGCCATGAGTAGCTTTGGAG...CCAGAGTATGTCTATAGCAGAGGGGGTTATGGGGGCGGGAGGGTAGACTGACAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000245925.8
CDS-3UTR CCA 90 bp ACCCCAAACCAAACACCAATGGATCCCCAAAGCGATGTGACTCCCTCTTCCCACCGTCTGGGATCATCATaGGCACAGGGCGGCCCCTCA +
Preference number: 4 (lower is better)
Translates to: TPNQTPMDPQSDVTPSSHRLGSS*AQGGPS
Trigger: TGAGGGGCCGCCCTGTGCCCATGATGATCCCAGACG...GTGGGAAGAGGGAGTCACATCGCTTTGGGGATCCATTGGTGTTTGGTTTGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CCA 90 bp TACCCTCCCGCCCCCATAACCCCCTCTGCTATAGACATACTCTGGGTATATATTTCCCAGATGCGCACGTaGGGCGGCAGCGGCTTCCCT +
Preference number: 4 (lower is better)
Translates to: YPPAPITPSAIDILWVYISQMRT*GGSGFP
Trigger: AGGGAAGCCGCTGCCGCCCCACGTGCGCATCTGGGA...AATATATACCCAGAGTATGTCTATAGCAGAGGGGGTTATGGGGGCGGGAGGGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CCA 90 bp ATGTCAGTCTACCCTCCCGCCCCCATAACCCCCTCTGCTATAGACATACTCTGGGTGGGGTCCGTGGGGTaGAAGGTGGCCACCAATACA +
Preference number: 4 (lower is better)
Translates to: MSVYPPAPITPSAIDILWVGSVG*KVATNT
Trigger: TGTATTGGTGGCCACCTTCCACCCCACGGACCCCAC...CCAGAGTATGTCTATAGCAGAGGGGGTTATGGGGGCGGGAGGGTAGACTGACAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CCA 90 bp TCCCGCCCCCATAACCCCCTCTGCTATAGACATACTCTGGGTATATATTACTCTAACACGCCGCCGTCGTaGGCGCCCAGCACCGCCTGT +
Preference number: 4 (lower is better)
Translates to: SRPHNPLCYRHTLGIYYSNTPPS*APSTAC
Trigger: ACAGGCGGTGCTGGGCGCCCACGACGGCGGCGTGTT...AGAGTAATATATACCCAGAGTATGTCTATAGCAGAGGGGGTTATGGGGGCGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CCA 90 bp ACAGGTGAACTTTGCCAAAGTCATCAGCTGAAGCCAGCAACTTCCCATCATGAGAACACGCCGCCGTCGTaGGCGCCCAGCACCGCCTGT +
Preference number: 4 (lower is better)
Translates to: TGELCQSHQLKPATSHHENTPPS*APSTAC
Trigger: ACAGGCGGTGCTGGGCGCCCACGACGGCGGCGTGTT...CTCATGATGGGAAGTTGCTGGCTTCAGCTGATGACTTTGGCAAAGTTCACCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586195.5
ENST00000588308.5
CDS-3UTR CCA 90 bp ACCCCAAACCAAACACCAATGGATCCCCAAAGCGATGTGACTCCCTCTTCCCACCGGAGCCCTGCAGGATaGAATTGCGGGTGGTCCCCA +
Preference number: 4 (lower is better)
Translates to: TPNQTPMDPQSDVTPSSHRSPAG*NCGWSP
Trigger: TGGGGACCACCCGCAATTCCATCCTGCAGGGCTCCG...GTGGGAAGAGGGAGTCACATCGCTTTGGGGATCCATTGGTGTTTGGTTTGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CCA 90 bp CTCATAGTCCCCGGAGTTGGTGACAAAGCAGCTGCTGTCCTGGGCCCAATCCAGTCTTCCACATGGCCCTaGACCAGCAGTGAGAAGCCT +
Preference number: 4 (lower is better)
Translates to: LIVPGVGDKAAAVLGPIQSSTWP*TSSEKP
Trigger: AGGCTTCTCACTGCTGGTCCAGGGCCATGTGGAAGA...CTGGATTGGGCCCAGGACAGCAGCTGCTTTGTCACCAACTCCGGGGACTATGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586195.5
ENST00000588308.5
CDS-3UTR CCA 90 bp TACCCTCCCGCCCCCATAACCCCCTCTGCTATAGACATACTCTGGGTATATATTCAAACTGGGCCCGACTaGGGTGTGTGGCCAGGCCCC +
Preference number: 4 (lower is better)
Translates to: YPPAPITPSAIDILWVYIQTGPD*GVWPGP
Trigger: GGGGCCTGGCCACACACCCCAGTCGGGCCCAGTTTG...AATATATACCCAGAGTATGTCTATAGCAGAGGGGGTTATGGGGGCGGGAGGGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CCA 90 bp AAACCAAACACCAATGGATCCCCAAAGCGATGTGACTCCCTCTTCCCACCCGGACCGCAGGTCACAAACTaGGCCCGACTGGGGTGTGTG +
Preference number: 4 (lower is better)
Translates to: KPNTNGSPKRCDSLFPPGPQVTN*ARLGCV
Trigger: CACACACCCCAGTCGGGCCCAGTTTGTGACCTGCGG...TCCGGGTGGGAAGAGGGAGTCACATCGCTTTGGGGATCCATTGGTGTTTGGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CCA 90 bp CACAGGGGCTGGTGGGAATCTGAGCTCCATAGATGCACCAGCTTATCCTGCCCGCTCCACAGGGGCTGGTaGGAATCTGAGCTCCATAGA +
Preference number: 4 (lower is better)
Translates to: HRGWWESELHRCTSLSCPLHRGW*ESELHR
Trigger: TCTATGGAGCTCAGATTCCCACCAGCCCCTGTGGAG...CGGGCAGGATAAGCTGGTGCATCTATGGAGCTCAGATTCCCACCAGCCCCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586195.5
ENST00000590819.5
CDS-3UTR CCA 90 bp GCCAGGTACGCCCCGTCTGGGGAGAAGCTGACCACTGAGATCTGTTCATTGCCGTCATTGCCGTCTGTGTaGATAGCCACCAGGTCATGG +
Preference number: 4 (lower is better)
Translates to: ARYAPSGEKLTTEICSLPSLPSV*IATRSW
Trigger: CCATGACCTGGTGGCTATCCACACAGACGGCAATGA...CGGCAATGAACAGATCTCAGTGGTCAGCTTCTCCCCAGACGGGGCGTACCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399594.7
ENST00000586195.5
ENST00000590819.5
CDS-3UTR CCA 90 bp AGCGTTGATATCAGTGCCGTCCGCCCCCTCAGACCAGATCCCAAACACCCCAAATACACCAAGTTGTCGTaGGAGCCCACGGCCAGGTAC +
Preference number: 4 (lower is better)
Translates to: SVDISAVRPLRPDPKHPKYTKLS*EPTARY
Trigger: GTACCTGGCCGTGGGCTCCCACGACAACTTGGTGTA...TTTGGGGTGTTTGGGATCTGGTCTGAGGGGGCGGACGGCACTGATATCAACGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586195.5
CDS-3UTR CCA 90 bp AAACCAAACACCAATGGATCCCCAAAGCGATGTGACTCCCTCTTCCCACCCGGAACCTTGCGGCCGCCCTaGTCCACCGTGTACACGTAC +
Preference number: 4 (lower is better)
Translates to: KPNTNGSPKRCDSLFPPGTLRPP*STVYTY
Trigger: GTACGTGTACACGGTGGACCAGGGCGGCCGCAAGGT...TCCGGGTGGGAAGAGGGAGTCACATCGCTTTGGGGATCCATTGGTGTTTGGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
CDS-3UTR CCA 90 bp ATGTCAGTCTACCCTCCCGCCCCCATAACCCCCTCTGCTATAGACATACTCTGGGCCACTGTAGCACACTaGTGTCCTTGCCCCCTGTGG +
Preference number: 4 (lower is better)
Translates to: MSVYPPAPITPSAIDILWATVAH*CPCPLW
Trigger: CCACAGGGGGCAAGGACACCAGTGTGCTACAGTGGC...CCAGAGTATGTCTATAGCAGAGGGGGTTATGGGGGCGGGAGGGTAGACTGACAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CCA 90 bp AAACCAAACACCAATGGATCCCCAAAGCGATGTGACTCCCTCTTCCCACCCGGACACCTGACTCTTCCCTaGCCGCATCAGACCACCCGC +
Preference number: 4 (lower is better)
Translates to: KPNTNGSPKRCDSLFPPGHLTLP*PHQTTR
Trigger: GCGGGTGGTCTGATGCGGCCAGGGAAGAGTCAGGTG...TCCGGGTGGGAAGAGGGAGTCACATCGCTTTGGGGATCCATTGGTGTTTGGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CCA 90 bp CCCTGTCAGGACTGGCTGAGAAGGCATCACATGCTGGGGTCTTCACAGCCCGCAATGAGCCACAGCATCTaGCTGGATCACCTGAGGTCA +
Preference number: 4 (lower is better)
Translates to: PCQDWLRRHHMLGSSQPAMSHSI*LDHLRS
Trigger: TGACCTCAGGTGATCCAGCCAGATGCTGTGGCTCAT...TGCGGGCTGTGAAGACCCCAGCATGTGATGCCTTCTCAGCCAGTCCTGACAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586405.1
CDS-3UTR CCA 90 bp AGCGTTGATATCAGTGCCGTCCGCCCCCTCAGACCAGATCCCAAACACCCCAAAGAAGGCATCACATGCTaGGGTCTTCACAGCCCGCAG +
Preference number: 4 (lower is better)
Translates to: SVDISAVRPLRPDPKHPKEGITC*GLHSPQ
Trigger: CTGCGGGCTGTGAAGACCCCAGCATGTGATGCCTTC...TTTGGGGTGTTTGGGATCTGGTCTGAGGGGGCGGACGGCACTGATATCAACGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586405.1
CDS-3UTR TCA 90 bp TTCCATGTTCCTCACAGCATCCGCACTGGTGATCTGCTTACAGGTAGCCGGGTCAGCAACTTCCCATCATaGGAGCGGGCCACAGCGTTG +
Preference number: 4 (lower is better)
Translates to: FHVPHSIRTGDLLTGSRVSNFPS*ERATAL
Trigger: CAACGCTGTGGCCCGCTCTCATGATGGGAAGTTGCT...GACCCGGCTACCTGTAAGCAGATCACCAGTGCGGATGCTGTGAGGAACATGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586195.5
ENST00000586405.1
ENST00000588308.5
CDS-3UTR TCA 90 bp AAACCAAACACCAATGGATCCCCAAAGCGATGTGACTCCCTCTTCCCACCCGGAATCCCCAAAGCGATGTaGCTCCCTCTTCCCACCCGG +
Preference number: 4 (lower is better)
Translates to: KPNTNGSPKRCDSLFPPGIPKAM*LPLPTR
Trigger: CCGGGTGGGAAGAGGGAGTCACATCGCTTTGGGGAT...TCCGGGTGGGAAGAGGGAGTCACATCGCTTTGGGGATCCATTGGTGTTTGGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR TCA 90 bp TACCCTCCCGCCCCCATAACCCCCTCTGCTATAGACATACTCTGGGTATATATTGGCGAGGCGCTCTGGTaGCAAGTAGCGGCGGACACT +
Preference number: 4 (lower is better)
Translates to: YPPAPITPSAIDILWVYIGEALW*QVAADT
Trigger: AGTGTCCGCCGCTACTTGTCACCAGAGCGCCTCGCC...AATATATACCCAGAGTATGTCTATAGCAGAGGGGGTTATGGGGGCGGGAGGGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000536630.5
ENST00000587152.6
CDS-3UTR GCA 90 bp TACCCTCCCGCCCCCATAACCCCCTCTGCTATAGACATACTCTGGGTATATATTGGCCCTCTGCCACGGTaGGCACAGGGCCAAAGTCCT +
Preference number: 4 (lower is better)
Translates to: YPPAPITPSAIDILWVYIGPLPR*AQGQSP
Trigger: AGGACTTTGGCCCTGTGCGCACCGTGGCAGAGGGCC...AATATATACCCAGAGTATGTCTATAGCAGAGGGGGTTATGGGGGCGGGAGGGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR GCA 90 bp ATGTCAGTCTACCCTCCCGCCCCCATAACCCCCTCTGCTATAGACATACTCTGGCCAGCAGCAGCCATCTaGCAGTCACTGTACCCACAG +
Preference number: 4 (lower is better)
Translates to: MSVYPPAPITPSAIDILWPAAAI*QSLYPQ
Trigger: CTGTGGGTACAGTGACTGGCAGATGGCTGCTGCTGG...CCAGAGTATGTCTATAGCAGAGGGGGTTATGGGGGCGGGAGGGTAGACTGACAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
CDS-3UTR GCA 90 bp CCAGGTCATGGGTCTCCGTGTCCAGCAGCAGCCATCTGCCAGTCACTGTACCCACTTCCATACCGCTCGTaGCCGACAAATTGTCATCTG +
Preference number: 4 (lower is better)
Translates to: PGHGSPCPAAAICQSLYPLPYRS*PTNCHL
Trigger: CAGATGACAATTTGTCGGGCACGAGCGGTATGGAAG...TGGGTACAGTGACTGGCAGATGGCTGCTGCTGGACACGGAGACCCATGACCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399594.7
CDS-3UTR GCA 90 bp ACCCCAAACCAAACACCAATGGATCCCCAAAGCGATGTGACTCCCTCTTCCCACTGGCGCTACAGTTGCTaGTGGAGGATGTGGTCCGGC +
Preference number: 4 (lower is better)
Translates to: TPNQTPMDPQSDVTPSSHWRYSC*WRMWSG
Trigger: GCCGGACCACATCCTCCAGCAGCAACTGTAGCGCCA...GTGGGAAGAGGGAGTCACATCGCTTTGGGGATCCATTGGTGTTTGGTTTGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536630.5
ENST00000587152.6
CDS-3UTR CCA 90 bp TTCCATGTTCCTCACAGCATCCGCACTGGTGATCTGCTTACAGGTAGCCGGGTCGCAGCAAATAAAGGTTaGCCCGGCAGTCTCGGCCAC +
Preference number: 4 (lower is better)
Translates to: FHVPHSIRTGDLLTGSRVAANKG*PGSLGH
Trigger: GTGGCCGAGACTGCCGGGCCAACCTTTATTTGCTGC...GACCCGGCTACCTGTAAGCAGATCACCAGTGCGGATGCTGTGAGGAACATGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588308.5
CDS-3UTR CCA 90 bp GTGGCCACCAATACAGCCTCATTGGAGCACTGTAGTCTCAGCTACTCAGGAGGCCCGTGGGGTGGAAGGTaGCCACCAATACAGCCTCAT +
Preference number: 4 (lower is better)
Translates to: VATNTASLEHCSLSYSGGPWGGR*PPIQPH
Trigger: ATGAGGCTGTATTGGTGGCCACCTTCCACCCCACGG...GCCTCCTGAGTAGCTGAGACTACAGTGCTCCAATGAGGCTGTATTGGTGGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592853.5
CDS-3UTR CCA 90 bp ACCCCAAACCAAACACCAATGGATCCCCAAAGCGATGTGACTCCCTCTTCCCACGTGGGGTCCGTGGGGTaGAAGGTGGCCACCAATACA +
Preference number: 4 (lower is better)
Translates to: TPNQTPMDPQSDVTPSSHVGSVG*KVATNT
Trigger: TGTATTGGTGGCCACCTTCCACCCCACGGACCCCAC...GTGGGAAGAGGGAGTCACATCGCTTTGGGGATCCATTGGTGTTTGGTTTGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CCA 90 bp TACCCTCCCGCCCCCATAACCCCCTCTGCTATAGACATACTCTGGGTATATATTGCACAGTGGGGTCCGTaGGGTGGAAGGTGGCCACCA +
Preference number: 4 (lower is better)
Translates to: YPPAPITPSAIDILWVYIAQWGP*GGRWPP
Trigger: TGGTGGCCACCTTCCACCCCACGGACCCCACTGTGC...AATATATACCCAGAGTATGTCTATAGCAGAGGGGGTTATGGGGGCGGGAGGGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CCA 90 bp AAACACCCCAAACCAAACACCAATGGATCCCCAAAGCGATGTGACTCCCTCTTCGCACAGTGGGGTCCGTaGGGTGGAAGGTGGCCACCA +
Preference number: 4 (lower is better)
Translates to: KHPKPNTNGSPKRCDSLFAQWGP*GGRWPP
Trigger: TGGTGGCCACCTTCCACCCCACGGACCCCACTGTGC...GAAGAGGGAGTCACATCGCTTTGGGGATCCATTGGTGTTTGGTTTGGGGTGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CCA 90 bp CATGTTCCTCACAGCATCCGCACTGGTGATCTGCTTACAGGTAGCCGGGTCCCAGGATGGAATTGCGGGTaGTCCCCACGTACAGTGTGT +
Preference number: 4 (lower is better)
Translates to: HVPHSIRTGDLLTGSRVPGWNCG*SPRTVC
Trigger: ACACACTGTACGTGGGGACCACCCGCAATTCCATCC...TGGGACCCGGCTACCTGTAAGCAGATCACCAGTGCGGATGCTGTGAGGAACATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586195.5
ENST00000588308.5
CDS-3UTR CCA 90 bp CCCGCCCCCATAACCCCCTCTGCTATAGACATACTCTGGGTATATATTACTCTACAAACTGGGCCCGACTaGGGTGTGTGGCCAGGCCCC +
Preference number: 4 (lower is better)
Translates to: PAPITPSAIDILWVYITLQTGPD*GVWPGP
Trigger: GGGGCCTGGCCACACACCCCAGTCGGGCCCAGTTTG...TAGAGTAATATATACCCAGAGTATGTCTATAGCAGAGGGGGTTATGGGGGCGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CCA 90 bp AAACACCCCAAACCAAACACCAATGGATCCCCAAAGCGATGTGACTCCCTCTTCACAGAGCCACTGGGGTaGAAGCCGGCTGAGCGGGCA +
Preference number: 4 (lower is better)
Translates to: KHPKPNTNGSPKRCDSLFTEPLG*KPAERA
Trigger: TGCCCGCTCAGCCGGCTTCCACCCCAGTGGCTCTGT...GAAGAGGGAGTCACATCGCTTTGGGGATCCATTGGTGTTTGGTTTGGGGTGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
CDS-3UTR CCA 90 bp TTCCATGTTCCTCACAGCATCCGCACTGGTGATCTGCTTACAGGTAGCCGGGTCATAGCCACCAGGTCATaGGTCTCCGTGTCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: FHVPHSIRTGDLLTGSRVIATRS*VSVSSS
Trigger: GCTGCTGGACACGGAGACCCATGACCTGGTGGCTAT...GACCCGGCTACCTGTAAGCAGATCACCAGTGCGGATGCTGTGAGGAACATGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586195.5
ENST00000588308.5
CDS-3UTR CCA 90 bp ATCCGCACTGGTGATCTGCTTACAGGTAGCCGGGTCCCCTGTCAGGACTGGCTGTGGGCCCAATCCAGGTaGGTGATAAAACTGGAATGG +
Preference number: 4 (lower is better)
Translates to: IRTGDLLTGSRVPCQDWLWAQSR*VIKLEW
Trigger: CCATTCCAGTTTTATCACCCACCTGGATTGGGCCCA...CAGCCAGTCCTGACAGGGGACCCGGCTACCTGTAAGCAGATCACCAGTGCGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586405.1
CDS-3UTR CCA 90 bp TACCCTCCCGCCCCCATAACCCCCTCTGCTATAGACATACTCTGGGTATATATTGAGAGGATGGGGACGTaGCATAGCCACCCACGCGCC +
Preference number: 4 (lower is better)
Translates to: YPPAPITPSAIDILWVYIERMGT*HSHPRA
Trigger: GGCGCGTGGGTGGCTATGCCACGTCCCCATCCTCTC...AATATATACCCAGAGTATGTCTATAGCAGAGGGGGTTATGGGGGCGGGAGGGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000536630.5
ENST00000587152.6
CDS-3UTR CCA 90 bp CCCCATAACCCCCTCTGCTATAGACATACTCTGGGTATATATTACTCTACTCGGCACAGGCCGCGCAGCTaGCCCTCTGGGCTCCGCAGT +
Preference number: 4 (lower is better)
Translates to: PHNPLCYRHTLGIYYSTRHRPRS*PSGLRS
Trigger: ACTGCGGAGCCCAGAGGGCCAGCTGCGCGGCCTGTG...CCGAGTAGAGTAATATATACCCAGAGTATGTCTATAGCAGAGGGGGTTATGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000536630.5
CDS-3UTR TCA 90 bp CCAGGTCATGGGTCTCCGTGTCCAGCAGCAGCCATCTGCCAGTCACTGTACCCACACACCGAGAGCATGTaGTCATTGGATTCATCCACT +
Preference number: 4 (lower is better)
Translates to: PGHGSPCPAAAICQSLYPHTESM*SLDSST
Trigger: AGTGGATGAATCCAATGATCACATGCTCTCGGTGTG...TGGGTACAGTGACTGGCAGATGGCTGCTGCTGGACACGGAGACCCATGACCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399594.7
ENST00000586195.5
CDS-3UTR TCA 90 bp CCCCATAACCCCCTCTGCTATAGACATACTCTGGGTATATATTACTCTACTCGGCCCCAGAGTCCCCCGTaGCCACGTCGCCACCTTCCA +
Preference number: 4 (lower is better)
Translates to: PHNPLCYRHTLGIYYSTRPQSPP*PRRHLP
Trigger: TGGAAGGTGGCGACGTGGTCACGGGGGACTCTGGGG...CCGAGTAGAGTAATATATACCCAGAGTATGTCTATAGCAGAGGGGGTTATGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR TCA 90 bp GTACTTGTGGCTGAGGGCTCGAGGCTGACAGCAGGGGTAGCTAAACAGGTGAACGCCAAAGTCATCAGCTaGAGCCAGCAACTTCCCATC +
Preference number: 4 (lower is better)
Translates to: VLVAEGSRLTAGVAKQVNAKVIS*SQQLPI
Trigger: GATGGGAAGTTGCTGGCTTCAGCTGATGACTTTGGC...GTTCACCTGTTTAGCTACCCCTGCTGTCAGCCTCGAGCCCTCAGCCACAAGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586195.5
ENST00000586405.1
ENST00000588308.5
CDS-3UTR GCA 90 bp AAACCAAACACCAATGGATCCCCAAAGCGATGTGACTCCCTCTTCCCACCCGGACAGGCTGTAGGTGGGTaGCAGCTCGTCTGGGATCAT +
Preference number: 4 (lower is better)
Translates to: KPNTNGSPKRCDSLFPPGQAVGG*QLVWDH
Trigger: ATGATCCCAGACGAGCTGGCACCCACCTACAGCCTG...TCCGGGTGGGAAGAGGGAGTCACATCGCTTTGGGGATCCATTGGTGTTTGGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR GCA 90 bp ACCCCAAACCAAACACCAATGGATCCCCAAAGCGATGTGACTCCCTCTTCCCACAGTGAGAAGCCTGTGTaGACGGAGCCCTGCAGGATG +
Preference number: 4 (lower is better)
Translates to: TPNQTPMDPQSDVTPSSHSEKPV*TEPCRM
Trigger: CATCCTGCAGGGCTCCGTGCACACAGGCTTCTCACT...GTGGGAAGAGGGAGTCACATCGCTTTGGGGATCCATTGGTGTTTGGTTTGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR GCA 90 bp ATGTCAGTCTACCCTCCCGCCCCCATAACCCCCTCTGCTATAGACATACTCTGGTGCACCAGCTTATCCTaGCCGCAGGTCACAAACTGG +
Preference number: 4 (lower is better)
Translates to: MSVYPPAPITPSAIDILWCTSLS*PQVTNW
Trigger: CCAGTTTGTGACCTGCGGGCAGGATAAGCTGGTGCA...CCAGAGTATGTCTATAGCAGAGGGGGTTATGGGGGCGGGAGGGTAGACTGACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR GCA 90 bp CCCTGTCAGGACTGGCTGAGAAGGCATCACATGCTGGGGTCTTCACAGCCCGCACATTTGTCACATGGCTaGTGTGTCCACCGTACTTGT +
Preference number: 4 (lower is better)
Translates to: PCQDWLRRHHMLGSSQPAHLSHG*CVHRTC
Trigger: ACAAGTACGGTGGACACAGCAGCCATGTGACAAATG...TGCGGGCTGTGAAGACCCCAGCATGTGATGCCTTCTCAGCCAGTCCTGACAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586405.1
CDS-3UTR GCA 90 bp TCCACCGTACTTGTGGCTGAGGGCTCGAGGCTGACAGCAGGGGTAGCTAAACAGCCCCATAACCCCCTCTaGTATAGACATACTCTGGGT +
Preference number: 4 (lower is better)
Translates to: STVLVAEGSRLTAGVAKQPHNPL*YRHTLG
Trigger: ACCCAGAGTATGTCTATAGCAGAGGGGGTTATGGGG...CTGTTTAGCTACCCCTGCTGTCAGCCTCGAGCCCTCAGCCACAAGTACGGTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000586195.5
ENST00000588308.5
CDS-3UTR GCA 90 bp TCCCGCCCCCATAACCCCCTCTGCTATAGACATACTCTGGGTATATATTACTCTTGTAACTGCAGCCGCTaGTCCAGCGCCGACACGCGG +
Preference number: 4 (lower is better)
Translates to: SRPHNPLCYRHTLGIYYSCNCSR*SSADTR
Trigger: CCGCGTGTCGGCGCTGGAGCAGCGGCTGCAGTTACA...AGAGTAATATATACCCAGAGTATGTCTATAGCAGAGGGGGTTATGGGGGCGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000536630.5
ENST00000587152.6
CDS-3UTR GCA 90 bp TCCCGCCCCCATAACCCCCTCTGCTATAGACATACTCTGGGTATATATTACTCTAGGGCCAGGATTGGCTaGGCCCGGATCCCCCTAGGT +
Preference number: 4 (lower is better)
Translates to: SRPHNPLCYRHTLGIYYSRARIG*ARIPLG
Trigger: ACCTAGGGGGATCCGGGCGCAGCCAATCCTGGCCCT...AGAGTAATATATACCCAGAGTATGTCTATAGCAGAGGGGGTTATGGGGGCGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000587152.6
CDS-3UTR CCA 90 bp AAACACCCCAAACCAAACACCAATGGATCCCCAAAGCGATGTGACTCCCTCTTCCGTCTGGGATCATCATaGGCACAGGGCGGCCCCTCA +
Preference number: 4 (lower is better)
Translates to: KHPKPNTNGSPKRCDSLFRLGSS*AQGGPS
Trigger: TGAGGGGCCGCCCTGTGCCCATGATGATCCCAGACG...GAAGAGGGAGTCACATCGCTTTGGGGATCCATTGGTGTTTGGTTTGGGGTGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CCA 90 bp AAACCAAACACCAATGGATCCCCAAAGCGATGTGACTCCCTCTTCCCACCCGGAGCAGCAAATAAAGGTTaGCCCGGCAGTCTCGGCCAC +
Preference number: 4 (lower is better)
Translates to: KPNTNGSPKRCDSLFPPGAANKG*PGSLGH
Trigger: GTGGCCGAGACTGCCGGGCCAACCTTTATTTGCTGC...TCCGGGTGGGAAGAGGGAGTCACATCGCTTTGGGGATCCATTGGTGTTTGGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CCA 90 bp CCAGGTCATGGGTCTCCGTGTCCAGCAGCAGCCATCTGCCAGTCACTGTACCCAGTGACCATATCTGGGTaGATGGCCAAGCATTTGATG +
Preference number: 4 (lower is better)
Translates to: PGHGSPCPAAAICQSLYPVTISG*MAKHLM
Trigger: CATCAAATGCTTGGCCATCCACCCAGATATGGTCAC...TGGGTACAGTGACTGGCAGATGGCTGCTGCTGGACACGGAGACCCATGACCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399594.7
CDS-3UTR CCA 90 bp GCCAGGTACGCCCCGTCTGGGGAGAAGCTGACCACTGAGATCTGTTCATTGCCGGATGGTGACCATATCTaGGTGGATGGCCAAGCATTT +
Preference number: 4 (lower is better)
Translates to: ARYAPSGEKLTTEICSLPDGDHI*VDGQAF
Trigger: AAATGCTTGGCCATCCACCCAGATATGGTCACCATC...CGGCAATGAACAGATCTCAGTGGTCAGCTTCTCCCCAGACGGGGCGTACCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399594.7
CDS-3UTR CCA 90 bp AGCCACTGGGGTGGAAGCCGGCTGAGCGGGCAGGGTCCTGTAATCCCAGCTACTAGAGCATGTGATCATTaGATTCATCCACTGCACACA +
Preference number: 4 (lower is better)
Translates to: SHWGGSRLSGQGPVIPATRACDH*IHPLHT
Trigger: TGTGTGCAGTGGATGAATCCAATGATCACATGCTCT...AGTAGCTGGGATTACAGGACCCTGCCCGCTCAGCCGGCTTCCACCCCAGTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399594.7
CDS-3UTR CCA 90 bp TACTTCGGTTTCTCATGTTTCTCAAAGAGGCCTTGCCGCTTGCTCAAGCTGCCCCCACCTTGGTCTCCTTaGCCCAGTCCCACACCGAGA +
Preference number: 4 (lower is better)
Translates to: YFGFSCFSKRPCRLLKLPPPWSP*PSPTPR
Trigger: TCTCGGTGTGGGACTGGGCCAAGGAGACCAAGGTGG...GGGCAGCTTGAGCAAGCGGCAAGGCCTCTTTGAGAAACATGAGAAACCGAAGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592853.5
CDS-3UTR CCA 90 bp ACCCCAAACCAAACACCAATGGATCCCCAAAGCGATGTGACTCCCTCTTCCCACCCGTGGGGTGGAAGGTaGCCACCAATACAGCCTCAT +
Preference number: 4 (lower is better)
Translates to: TPNQTPMDPQSDVTPSSHPWGGR*PPIQPH
Trigger: ATGAGGCTGTATTGGTGGCCACCTTCCACCCCACGG...GTGGGAAGAGGGAGTCACATCGCTTTGGGGATCCATTGGTGTTTGGTTTGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CCA 90 bp TACCCTCCCGCCCCCATAACCCCCTCTGCTATAGACATACTCTGGGTATATATTTACAGTGTGTCTCCGTaGCCCTCTGCCACGGTGCGC +
Preference number: 4 (lower is better)
Translates to: YPPAPITPSAIDILWVYIYSVSP*PSATVR
Trigger: GCGCACCGTGGCAGAGGGCCACGGAGACACACTGTA...AATATATACCCAGAGTATGTCTATAGCAGAGGGGGTTATGGGGGCGGGAGGGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CCA 90 bp AAACACCCCAAACCAAACACCAATGGATCCCCAAAGCGATGTGACTCCCTCTTCCGGAGCCCTGCAGGATaGAATTGCGGGTGGTCCCCA +
Preference number: 4 (lower is better)
Translates to: KHPKPNTNGSPKRCDSLFRSPAG*NCGWSP
Trigger: TGGGGACCACCCGCAATTCCATCCTGCAGGGCTCCG...GAAGAGGGAGTCACATCGCTTTGGGGATCCATTGGTGTTTGGTTTGGGGTGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CCA 90 bp AAACCAAACACCAATGGATCCCCAAAGCGATGTGACTCCCTCTTCCCACCCGGACACAGCTCTTCCACATaGCCCTGGACCAGCAGTGAG +
Preference number: 4 (lower is better)
Translates to: KPNTNGSPKRCDSLFPPGHSSST*PWTSSE
Trigger: CTCACTGCTGGTCCAGGGCCATGTGGAAGAGCTGTG...TCCGGGTGGGAAGAGGGAGTCACATCGCTTTGGGGATCCATTGGTGTTTGGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CCA 90 bp CCCCATAACCCCCTCTGCTATAGACATACTCTGGGTATATATTACTCTACTCGGCAAACTGGGCCCGACTaGGGTGTGTGGCCAGGCCCC +
Preference number: 4 (lower is better)
Translates to: PHNPLCYRHTLGIYYSTRQTGPD*GVWPGP
Trigger: GGGGCCTGGCCACACACCCCAGTCGGGCCCAGTTTG...CCGAGTAGAGTAATATATACCCAGAGTATGTCTATAGCAGAGGGGGTTATGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CCA 90 bp AAACACCCCAAACCAAACACCAATGGATCCCCAAAGCGATGTGACTCCCTCTTCCCGCAGGTCACAAACTaGGCCCGACTGGGGTGTGTG +
Preference number: 4 (lower is better)
Translates to: KHPKPNTNGSPKRCDSLFPQVTN*ARLGCV
Trigger: CACACACCCCAGTCGGGCCCAGTTTGTGACCTGCGG...GAAGAGGGAGTCACATCGCTTTGGGGATCCATTGGTGTTTGGTTTGGGGTGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CCA 90 bp ACGTCGCCACCTTCCAAAAAGGTCACACACAGCACATACTTCGGTTTCTCATGTCCAGGACAGAGCCACTaGGGTGGAAGCCGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: TSPPSKKVTHSTYFGFSCPGQSH*GGSRLS
Trigger: GCTCAGCCGGCTTCCACCCCAGTGGCTCTGTCCTGG...ACATGAGAAACCGAAGTATGTGCTGTGTGTGACCTTTTTGGAAGGTGGCGACGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586195.5
CDS-3UTR CCA 90 bp AAACCAAACACCAATGGATCCCCAAAGCGATGTGACTCCCTCTTCCCACCCGGAATAGCCACCAGGTCATaGGTCTCCGTGTCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: KPNTNGSPKRCDSLFPPGIATRS*VSVSSS
Trigger: GCTGCTGGACACGGAGACCCATGACCTGGTGGCTAT...TCCGGGTGGGAAGAGGGAGTCACATCGCTTTGGGGATCCATTGGTGTTTGGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CCA 90 bp TCCATGTTCCTCACAGCATCCGCACTGGTGATCTGCTTACAGGTAGCCGGGTCCTCATTGCCGTCTGTGTaGATAGCCACCAGGTCATGG +
Preference number: 4 (lower is better)
Translates to: SMFLTASALVICLQVAGSSLPSV*IATRSW
Trigger: CCATGACCTGGTGGCTATCCACACAGACGGCAATGA...GGACCCGGCTACCTGTAAGCAGATCACCAGTGCGGATGCTGTGAGGAACATGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586195.5
ENST00000588308.5
CDS-3UTR CCA 90 bp CCGGAGTTGGTGACAAAGCAGCTGCTGTCCTGGGCCCAATCCAGGTGGGTGATATGGGCCCAATCCAGGTaGGTGATAAAACTGGAATGG +
Preference number: 4 (lower is better)
Translates to: PELVTKQLLSWAQSRWVIWAQSR*VIKLEW
Trigger: CCATTCCAGTTTTATCACCCACCTGGATTGGGCCCA...TATCACCCACCTGGATTGGGCCCAGGACAGCAGCTGCTTTGTCACCAACTCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586195.5
ENST00000588308.5
CDS-3UTR CCA 90 bp TCCACCGTACTTGTGGCTGAGGGCTCGAGGCTGACAGCAGGGGTAGCTAAACAGTGGGCCCAATCCAGGTaGGTGATAAAACTGGAATGG +
Preference number: 4 (lower is better)
Translates to: STVLVAEGSRLTAGVAKQWAQSR*VIKLEW
Trigger: CCATTCCAGTTTTATCACCCACCTGGATTGGGCCCA...CTGTTTAGCTACCCCTGCTGTCAGCCTCGAGCCCTCAGCCACAAGTACGGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586195.5
ENST00000586405.1
ENST00000588308.5
CDS-3UTR CCA 90 bp ATGTTCCTCACAGCATCCGCACTGGTGATCTGCTTACAGGTAGCCGGGTCCCCTGCCACATTTGTCACATaGCTGCTGTGTCCACCGTAC +
Preference number: 4 (lower is better)
Translates to: MFLTASALVICLQVAGSPATFVT*LLCPPY
Trigger: GTACGGTGGACACAGCAGCCATGTGACAAATGTGGC...AGGGGACCCGGCTACCTGTAAGCAGATCACCAGTGCGGATGCTGTGAGGAACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586405.1
CDS-3UTR CCA 90 bp GAAGTAGATGTGAGATTTCCCGCAGGTGATAAGCACAGTGGGGTCCGTGGGGTGAGTCAGGAGAATCGCTaGAACCTGGGAGGTGGAGGT +
Preference number: 4 (lower is better)
Translates to: EVDVRFPAGDKHSGVRGVSQENR*NLGGGG
Trigger: ACCTCCACCTCCCAGGTTCCAGCGATTCTCCTGACT...CACCCCACGGACCCCACTGTGCTTATCACCTGCGGGAAATCTCACATCTACTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592853.5
CDS-3UTR TCA 90 bp TACCCTCCCGCCCCCATAACCCCCTCTGCTATAGACATACTCTGGGTATATATTAGACCCACTCCAGCTTaGGCCGGCAAGAAGGCAGCT +
Preference number: 4 (lower is better)
Translates to: YPPAPITPSAIDILWVYIRPTPA*AGKKAA
Trigger: AGCTGCCTTCTTGCCGGCTCAAGCTGGAGTGGGTCT...AATATATACCCAGAGTATGTCTATAGCAGAGGGGGTTATGGGGGCGGGAGGGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR TCA 90 bp ACCACGTCGCCACCTTCCAAAAAGGTCACACACAGCACATACTTCGGTTTCTCAGTCCCGTGGCGATGGTaGCCATATCTGGGTGGATGG +
Preference number: 4 (lower is better)
Translates to: TTSPPSKKVTHSTYFGFSVPWRW*PYLGGW
Trigger: CCATCCACCCAGATATGGTCACCATCGCCACGGGAC...TGAGAAACCGAAGTATGTGCTGTGTGTGACCTTTTTGGAAGGTGGCGACGTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586195.5
CDS-3UTR TCA 90 bp ATGTCAGTCTACCCTCCCGCCCCCATAACCCCCTCTGCTATAGACATACTCTGGCCTCATTGGAGCACTTaGCATCCACCACCTTGGTCT +
Preference number: 4 (lower is better)
Translates to: MSVYPPAPITPSAIDILWPHWST*HPPPWS
Trigger: AGACCAAGGTGGTGGATGTCAAGTGCTCCAATGAGG...CCAGAGTATGTCTATAGCAGAGGGGGTTATGGGGGCGGGAGGGTAGACTGACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR TCA 90 bp TTCCATGTTCCTCACAGCATCCGCACTGGTGATCTGCTTACAGGTAGCCGGGTCGGAGAAGCTGACCACTaGGATCTGTTCATTGCCGTC +
Preference number: 4 (lower is better)
Translates to: FHVPHSIRTGDLLTGSRVGEADH*DLFIAV
Trigger: GACGGCAATGAACAGATCTCAGTGGTCAGCTTCTCC...GACCCGGCTACCTGTAAGCAGATCACCAGTGCGGATGCTGTGAGGAACATGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586195.5
ENST00000588308.5
CDS-3UTR TCA 90 bp ATGTCAGTCTACCCTCCCGCCCCCATAACCCCCTCTGCTATAGACATACTCTGGGCCAAAGTCATCAGCTaGAGCCAGCAACTTCCCATC +
Preference number: 4 (lower is better)
Translates to: MSVYPPAPITPSAIDILWAKVIS*SQQLPI
Trigger: GATGGGAAGTTGCTGGCTTCAGCTGATGACTTTGGC...CCAGAGTATGTCTATAGCAGAGGGGGTTATGGGGGCGGGAGGGTAGACTGACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR TCA 90 bp TGCTGGGGTCTTCACAGCCCGCAGCGTAAGCAGGAGCATCTACTTTTAAACCCGGCCAAAGTCATCAGCTaGAGCCAGCAACTTCCCATC +
Preference number: 4 (lower is better)
Translates to: CWGLHSPQRKQEHLLLNPAKVIS*SQQLPI
Trigger: GATGGGAAGTTGCTGGCTTCAGCTGATGACTTTGGC...CGGGTTTAAAAGTAGATGCTCCTGCTTACGCTGCGGGCTGTGAAGACCCCAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586405.1
CDS-3UTR TCA 90 bp GGTCAGGGCCATGCTGTCATCCCACAAGAAGGCCACATTTGTCACATGGCTGCTATAGAATTCCTGCCCTaGCACCTGACTCTTCCCTGG +
Preference number: 4 (lower is better)
Translates to: GQGHAVIPQEGHICHMAAIEFLP*HLTLPW
Trigger: CCAGGGAAGAGTCAGGTGTCAGGGCAGGAATTCTAT...AGCAGCCATGTGACAAATGTGGCCTTCTTGTGGGATGACAGCATGGCCCTGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586195.5
ENST00000588308.5
CDS-3UTR TCA 90 bp GTGGCCACCAATACAGCCTCATTGGAGCACTGTAGTCTCAGCTACTCAGGAGGCATTGCACTCCAGCCTTaGCATCCACCACCTTGGTCT +
Preference number: 4 (lower is better)
Translates to: VATNTASLEHCSLSYSGGIALQP*HPPPWS
Trigger: AGACCAAGGTGGTGGATGTCAAGGCTGGAGTGCAAT...GCCTCCTGAGTAGCTGAGACTACAGTGCTCCAATGAGGCTGTATTGGTGGCCAC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592853.5
CDS-3UTR GCA 90 bp AAGCAGCTGCTGTCCTGGGCCCAATCCAGGTGGGTGATAAAACTGGAATGGCCCTACGGTTCCCACCTTTaGCCCAAACATAGAGGTTCC +
Preference number: 4 (lower is better)
Translates to: KQLLSWAQSRWVIKLEWPYGSHL*PKHRGS
Trigger: GGAACCTCTATGTTTGGGGCAAAGGTGGGAACCGTA...GGGCCATTCCAGTTTTATCACCCACCTGGATTGGGCCCAGGACAGCAGCTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586195.5
ENST00000588308.5
CDS-3UTR GCA 90 bp GCCCCCATAACCCCCTCTGCTATAGACATACTCTGGGTATATATTACTCTACTCGGCCCTCTGCCACGGTaGGCACAGGGCCAAAGTCCT +
Preference number: 4 (lower is better)
Translates to: APITPSAIDILWVYITLLGPLPR*AQGQSP
Trigger: AGGACTTTGGCCCTGTGCGCACCGTGGCAGAGGGCC...GAGTAGAGTAATATATACCCAGAGTATGTCTATAGCAGAGGGGGTTATGGGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR GCA 90 bp TACCCTCCCGCCCCCATAACCCCCTCTGCTATAGACATACTCTGGGTATATATTGTGTGCACGGAGCCCTaGAGGATGGAATTGCGGGTG +
Preference number: 4 (lower is better)
Translates to: YPPAPITPSAIDILWVYIVCTEP*RMELRV
Trigger: CACCCGCAATTCCATCCTGCAGGGCTCCGTGCACAC...AATATATACCCAGAGTATGTCTATAGCAGAGGGGGTTATGGGGGCGGGAGGGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR GCA 90 bp CGCACTGGTGATCTGCTTACAGGTAGCCGGGTCCCAGTACAGAATCTCATAGTCTGCACCAGCTTATCCTaGCCGCAGGTCACAAACTGG +
Preference number: 4 (lower is better)
Translates to: RTGDLLTGSRVPVQNLIVCTSLS*PQVTNW
Trigger: CCAGTTTGTGACCTGCGGGCAGGATAAGCTGGTGCA...GACTATGAGATTCTGTACTGGGACCCGGCTACCTGTAAGCAGATCACCAGTGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586195.5
ENST00000588308.5
CDS-3UTR GCA 90 bp TCCCGCCCCCATAACCCCCTCTGCTATAGACATACTCTGGGTATATATTACTCTTCCCTGTTCTTCGCATaGCCGCAGGCGACGCAGAGC +
Preference number: 4 (lower is better)
Translates to: SRPHNPLCYRHTLGIYYSSLFFA*PQATQS
Trigger: GCTCTGCGTCGCCTGCGGGCATGCGAAGAACAGGGA...AGAGTAATATATACCCAGAGTATGTCTATAGCAGAGGGGGTTATGGGGGCGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000536630.5
ENST00000587152.6
CDS-3UTR CCA 90 bp AAACACCCCAAACCAAACACCAATGGATCCCCAAAGCGATGTGACTCCCTCTTCGGGTGCCAGCTCGTCTaGGATCATCATGGGCACAGG +
Preference number: 4 (lower is better)
Translates to: KHPKPNTNGSPKRCDSLFGCQLV*DHHGHR
Trigger: CCTGTGCCCATGATGATCCCAGACGAGCTGGCACCC...GAAGAGGGAGTCACATCGCTTTGGGGATCCATTGGTGTTTGGTTTGGGGTGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CCA 90 bp TCCACCGTACTTGTGGCTGAGGGCTCGAGGCTGACAGCAGGGGTAGCTAAACAGGATGGTGACCATATCTaGGTGGATGGCCAAGCATTT +
Preference number: 4 (lower is better)
Translates to: STVLVAEGSRLTAGVAKQDGDHI*VDGQAF
Trigger: AAATGCTTGGCCATCCACCCAGATATGGTCACCATC...CTGTTTAGCTACCCCTGCTGTCAGCCTCGAGCCCTCAGCCACAAGTACGGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588308.5
CDS-3UTR CCA 90 bp AAACCAAACACCAATGGATCCCCAAAGCGATGTGACTCCCTCTTCCCACCCGGACCAGCACGTGTAAGGTaGAGAGGGAAACTGAGTCCC +
Preference number: 4 (lower is better)
Translates to: KPNTNGSPKRCDSLFPPGPARVR*RGKLSP
Trigger: GGGACTCAGTTTCCCTCTCCACCTTACACGTGCTGG...TCCGGGTGGGAAGAGGGAGTCACATCGCTTTGGGGATCCATTGGTGTTTGGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CCA 90 bp TACCCTCCCGCCCCCATAACCCCCTCTGCTATAGACATACTCTGGGTATATATTCCACCTTGGTCTCCTTaGCCCAGTCCCACACCGAGA +
Preference number: 4 (lower is better)
Translates to: YPPAPITPSAIDILWVYIPPWSP*PSPTPR
Trigger: TCTCGGTGTGGGACTGGGCCAAGGAGACCAAGGTGG...AATATATACCCAGAGTATGTCTATAGCAGAGGGGGTTATGGGGGCGGGAGGGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CCA 90 bp AAACACCCCAAACCAAACACCAATGGATCCCCAAAGCGATGTGACTCCCTCTTCGTGGGGTCCGTGGGGTaGAAGGTGGCCACCAATACA +
Preference number: 4 (lower is better)
Translates to: KHPKPNTNGSPKRCDSLFVGSVG*KVATNT
Trigger: TGTATTGGTGGCCACCTTCCACCCCACGGACCCCAC...GAAGAGGGAGTCACATCGCTTTGGGGATCCATTGGTGTTTGGTTTGGGGTGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CCA 90 bp CCCGCCCCCATAACCCCCTCTGCTATAGACATACTCTGGGTATATATTACTCTATACAGTGTGTCTCCGTaGCCCTCTGCCACGGTGCGC +
Preference number: 4 (lower is better)
Translates to: PAPITPSAIDILWVYITLYSVSP*PSATVR
Trigger: GCGCACCGTGGCAGAGGGCCACGGAGACACACTGTA...TAGAGTAATATATACCCAGAGTATGTCTATAGCAGAGGGGGTTATGGGGGCGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CCA 90 bp ACCCCAAACCAAACACCAATGGATCCCCAAAGCGATGTGACTCCCTCTTCCCACTCTTCCACATGGCCCTaGACCAGCAGTGAGAAGCCT +
Preference number: 4 (lower is better)
Translates to: TPNQTPMDPQSDVTPSSHSSTWP*TSSEKP
Trigger: AGGCTTCTCACTGCTGGTCCAGGGCCATGTGGAAGA...GTGGGAAGAGGGAGTCACATCGCTTTGGGGATCCATTGGTGTTTGGTTTGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CCA 90 bp CCCGCCCCCATAACCCCCTCTGCTATAGACATACTCTGGGTATATATTACTCTAACCTTGCGGCCGCCCTaGTCCACCGTGTACACGTAC +
Preference number: 4 (lower is better)
Translates to: PAPITPSAIDILWVYITLTLRPP*STVYTY
Trigger: GTACGTGTACACGGTGGACCAGGGCGGCCGCAAGGT...TAGAGTAATATATACCCAGAGTATGTCTATAGCAGAGGGGGTTATGGGGGCGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
CDS-3UTR CCA 90 bp GCCCCCATAACCCCCTCTGCTATAGACATACTCTGGGTATATATTACTCTACTCGAGAGGATGGGGACGTaGCATAGCCACCCACGCGCC +
Preference number: 4 (lower is better)
Translates to: APITPSAIDILWVYITLLERMGT*HSHPRA
Trigger: GGCGCGTGGGTGGCTATGCCACGTCCCCATCCTCTC...GAGTAGAGTAATATATACCCAGAGTATGTCTATAGCAGAGGGGGTTATGGGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000536630.5
ENST00000587152.6
CDS-3UTR CCA 90 bp CTCACAGCATCCGCACTGGTGATCTGCTTACAGGTAGCCGGGTCCCAGTACAGAGTGATAAAACTGGAATaGCCCTGGGGAGAAGCTGAC +
Preference number: 4 (lower is better)
Translates to: LTASALVICLQVAGSQYRVIKLE*PWGEAD
Trigger: GTCAGCTTCTCCCCAGGGCCATTCCAGTTTTATCAC...TCTGTACTGGGACCCGGCTACCTGTAAGCAGATCACCAGTGCGGATGCTGTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588308.5
CDS-3UTR TCA 90 bp ATGTCAGTCTACCCTCCCGCCCCCATAACCCCCTCTGCTATAGACATACTCTGGGGATGGCCAAGCATTTaGTGTCATCGTTGTGTCCCA +
Preference number: 4 (lower is better)
Translates to: MSVYPPAPITPSAIDILWGWPSI*CHRCVP
Trigger: TGGGACACAACGATGACATCAAATGCTTGGCCATCC...CCAGAGTATGTCTATAGCAGAGGGGGTTATGGGGGCGGGAGGGTAGACTGACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR TCA 90 bp ACCCCAAACCAAACACCAATGGATCCCCAAAGCGATGTGACTCCCTCTTCCCACCCTCATTGGAGCACTTaGCATCCACCACCTTGGTCT +
Preference number: 4 (lower is better)
Translates to: TPNQTPMDPQSDVTPSSHPHWST*HPPPWS
Trigger: AGACCAAGGTGGTGGATGTCAAGTGCTCCAATGAGG...GTGGGAAGAGGGAGTCACATCGCTTTGGGGATCCATTGGTGTTTGGTTTGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR TCA 90 bp AAACCAAACACCAATGGATCCCCAAAGCGATGTGACTCCCTCTTCCCACCCGGACGTCTGGGGAGAAGCTaGCCACTGAGATCTGTTCAT +
Preference number: 4 (lower is better)
Translates to: KPNTNGSPKRCDSLFPPGRLGRS*PLRSVH
Trigger: ATGAACAGATCTCAGTGGTCAGCTTCTCCCCAGACG...TCCGGGTGGGAAGAGGGAGTCACATCGCTTTGGGGATCCATTGGTGTTTGGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
CDS-3UTR TCA 90 bp AAACACCCCAAACCAAACACCAATGGATCCCCAAAGCGATGTGACTCCCTCTTCAGCAACTTCCCATCATaGGAGCGGGCCACAGCGTTG +
Preference number: 4 (lower is better)
Translates to: KHPKPNTNGSPKRCDSLFSNFPS*ERATAL
Trigger: CAACGCTGTGGCCCGCTCTCATGATGGGAAGTTGCT...GAAGAGGGAGTCACATCGCTTTGGGGATCCATTGGTGTTTGGTTTGGGGTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR TCA 90 bp AAACCAAACACCAATGGATCCCCAAAGCGATGTGACTCCCTCTTCCCACCCGGAGCCAAAGTCATCAGCTaGAGCCAGCAACTTCCCATC +
Preference number: 4 (lower is better)
Translates to: KPNTNGSPKRCDSLFPPGAKVIS*SQQLPI
Trigger: GATGGGAAGTTGCTGGCTTCAGCTGATGACTTTGGC...TCCGGGTGGGAAGAGGGAGTCACATCGCTTTGGGGATCCATTGGTGTTTGGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR TCA 90 bp ACCCCAAACCAAACACCAATGGATCCCCAAAGCGATGTGACTCCCTCTTCCCACATAGAATTCCTGCCCTaGCACCTGACTCTTCCCTGG +
Preference number: 4 (lower is better)
Translates to: TPNQTPMDPQSDVTPSSHIEFLP*HLTLPW
Trigger: CCAGGGAAGAGTCAGGTGTCAGGGCAGGAATTCTAT...GTGGGAAGAGGGAGTCACATCGCTTTGGGGATCCATTGGTGTTTGGTTTGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR GCA 90 bp AAACACCCCAAACCAAACACCAATGGATCCCCAAAGCGATGTGACTCCCTCTTCCCAGCAGCAGCCATCTaGCAGTCACTGTACCCACAG +
Preference number: 4 (lower is better)
Translates to: KHPKPNTNGSPKRCDSLFPAAAI*QSLYPQ
Trigger: CTGTGGGTACAGTGACTGGCAGATGGCTGCTGCTGG...GAAGAGGGAGTCACATCGCTTTGGGGATCCATTGGTGTTTGGTTTGGGGTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
CDS-3UTR GCA 90 bp CCCGCCCCCATAACCCCCTCTGCTATAGACATACTCTGGGTATATATTACTCTATCGTCTTCCTGTAACTaGAGCCGCTGCTCCAGCGCC +
Preference number: 4 (lower is better)
Translates to: PAPITPSAIDILWVYITLSSSCN*SRCSSA
Trigger: GGCGCTGGAGCAGCGGCTGCAGTTACAGGAAGACGA...TAGAGTAATATATACCCAGAGTATGTCTATAGCAGAGGGGGTTATGGGGGCGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000536630.5
ENST00000587152.6
CDS-3UTR CCA 90 bp CCCGCCCCCATAACCCCCTCTGCTATAGACATACTCTGGGTATATATTACTCTATGTCCAGGCTGTAGGTaGGTGCCAGCTCGTCTGGGA +
Preference number: 4 (lower is better)
Translates to: PAPITPSAIDILWVYITLCPGCR*VPARLG
Trigger: TCCCAGACGAGCTGGCACCCACCTACAGCCTGGACA...TAGAGTAATATATACCCAGAGTATGTCTATAGCAGAGGGGGTTATGGGGGCGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CCA 90 bp TTCCATGTTCCTCACAGCATCCGCACTGGTGATCTGCTTACAGGTAGCCGGGTCACACTATCTCCCCGGTaGGCAGCAAATAAAGGTTGG +
Preference number: 4 (lower is better)
Translates to: FHVPHSIRTGDLLTGSRVTLSPR*AANKGW
Trigger: CCAACCTTTATTTGCTGCCCACCGGGGAGATAGTGT...GACCCGGCTACCTGTAAGCAGATCACCAGTGCGGATGCTGTGAGGAACATGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588308.5
CDS-3UTR CCA 90 bp TCCCGCCCCCATAACCCCCTCTGCTATAGACATACTCTGGGTATATATTACTCTCCACCTTGGTCTCCTTaGCCCAGTCCCACACCGAGA +
Preference number: 4 (lower is better)
Translates to: SRPHNPLCYRHTLGIYYSPPWSP*PSPTPR
Trigger: TCTCGGTGTGGGACTGGGCCAAGGAGACCAAGGTGG...AGAGTAATATATACCCAGAGTATGTCTATAGCAGAGGGGGTTATGGGGGCGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CCA 90 bp CCCTCTGCTATAGACATACTCTGGGTATATATTACTCTACTCGGCAATAGACATAACACGCCGCCGTCGTaGGCGCCCAGCACCGCCTGT +
Preference number: 4 (lower is better)
Translates to: PSAIDILWVYITLLGNRHNTPPS*APSTAC
Trigger: ACAGGCGGTGCTGGGCGCCCACGACGGCGGCGTGTT...ATGTCTATTGCCGAGTAGAGTAATATATACCCAGAGTATGTCTATAGCAGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CCA 90 bp TACCCTCCCGCCCCCATAACCCCCTCTGCTATAGACATACTCTGGGTATATATTATAGCCACCAGGTCATaGGTCTCCGTGTCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: YPPAPITPSAIDILWVYIIATRS*VSVSSS
Trigger: GCTGCTGGACACGGAGACCCATGACCTGGTGGCTAT...AATATATACCCAGAGTATGTCTATAGCAGAGGGGGTTATGGGGGCGGGAGGGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CCA 90 bp AAACCAAACACCAATGGATCCCCAAAGCGATGTGACTCCCTCTTCCCACCCGGAGCCACATTTGTCACATaGCTGCTGTGTCCACCGTAC +
Preference number: 4 (lower is better)
Translates to: KPNTNGSPKRCDSLFPPGATFVT*LLCPPY
Trigger: GTACGGTGGACACAGCAGCCATGTGACAAATGTGGC...TCCGGGTGGGAAGAGGGAGTCACATCGCTTTGGGGATCCATTGGTGTTTGGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CCA 90 bp CCCGCCCCCATAACCCCCTCTGCTATAGACATACTCTGGGTATATATTACTCTAGCCACTGTAGCACACTaGTGTCCTTGCCCCCTGTGG +
Preference number: 4 (lower is better)
Translates to: PAPITPSAIDILWVYITLATVAH*CPCPLW
Trigger: CCACAGGGGGCAAGGACACCAGTGTGCTACAGTGGC...TAGAGTAATATATACCCAGAGTATGTCTATAGCAGAGGGGGTTATGGGGGCGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CCA 90 bp CCCCATAACCCCCTCTGCTATAGACATACTCTGGGTATATATTACTCTACTCGGCACCTGACTCTTCCCTaGCCGCATCAGACCACCCGC +
Preference number: 4 (lower is better)
Translates to: PHNPLCYRHTLGIYYSTRHLTLP*PHQTTR
Trigger: GCGGGTGGTCTGATGCGGCCAGGGAAGAGTCAGGTG...CCGAGTAGAGTAATATATACCCAGAGTATGTCTATAGCAGAGGGGGTTATGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CCA 90 bp AAACACCCCAAACCAAACACCAATGGATCCCCAAAGCGATGTGACTCCCTCTTCCTTCTTGGGAGAGGATaGGGACGTGGCATAGCCACC +
Preference number: 4 (lower is better)
Translates to: KHPKPNTNGSPKRCDSLFLLGRG*GRGIAT
Trigger: GGTGGCTATGCCACGTCCCCATCCTCTCCCAAGAAG...GAAGAGGGAGTCACATCGCTTTGGGGATCCATTGGTGTTTGGTTTGGGGTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536630.5
ENST00000587152.6
CDS-3UTR CCA 90 bp CCCGCCCCCATAACCCCCTCTGCTATAGACATACTCTGGGTATATATTACTCTAAGGTCGCCTCCTTCTTaGGAGAGGATGGGGACGTGG +
Preference number: 4 (lower is better)
Translates to: PAPITPSAIDILWVYITLRSPPS*ERMGTW
Trigger: CCACGTCCCCATCCTCTCCCAAGAAGGAGGCGACCT...TAGAGTAATATATACCCAGAGTATGTCTATAGCAGAGGGGGTTATGGGGGCGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000536630.5
ENST00000587152.6
CDS-3UTR TCA 90 bp ATGTCAGTCTACCCTCCCGCCCCCATAACCCCCTCTGCTATAGACATACTCTGGCACACCGAGAGCATGTaGTCATTGGATTCATCCACT +
Preference number: 4 (lower is better)
Translates to: MSVYPPAPITPSAIDILWHTESM*SLDSST
Trigger: AGTGGATGAATCCAATGATCACATGCTCTCGGTGTG...CCAGAGTATGTCTATAGCAGAGGGGGTTATGGGGGCGGGAGGGTAGACTGACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR TCA 90 bp CTCTGGGTATATATTACTCTACTCGGCAATAGACATCTCCCGAAAATAGAATTCACTTGCCCAGGCGGCTaGCCTTGCGGCCGCCCTGGT +
Preference number: 4 (lower is better)
Translates to: LWVYITLLGNRHLPKIEFTCPGG*PCGRPG
Trigger: ACCAGGGCGGCCGCAAGGTCAGCCGCCTGGGCAAGT...GAATTCTATTTTCGGGAGATGTCTATTGCCGAGTAGAGTAATATATACCCAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
CDS-3UTR TCA 90 bp ACCCCCTCTGCTATAGACATACTCTGGGTATATATTACTCTACTCGGCAATAGAAGCGGGCCACAGCGTTaGTATCAGTGCCGTCCGCCC +
Preference number: 4 (lower is better)
Translates to: TPSAIDILWVYITLLGNRSGPQR*YQCRPP
Trigger: GGGCGGACGGCACTGATATCAACGCTGTGGCCCGCT...TCTATTGCCGAGTAGAGTAATATATACCCAGAGTATGTCTATAGCAGAGGGGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR GCA 90 bp TCTGCTATAGACATACTCTGGGTATATATTACTCTACTCGGCAATAGACATCTCGTCTCCGTGGCCCTCTaGCACGGTGCGCACAGGGCC +
Preference number: 4 (lower is better)
Translates to: SAIDILWVYITLLGNRHLVSVAL*HGAHRA
Trigger: GGCCCTGTGCGCACCGTGGCAGAGGGCCACGGAGAC...GAGATGTCTATTGCCGAGTAGAGTAATATATACCCAGAGTATGTCTATAGCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR GCA 90 bp TCCCGCCCCCATAACCCCCTCTGCTATAGACATACTCTGGGTATATATTACTCTAGTGAGAAGCCTGTGTaGACGGAGCCCTGCAGGATG +
Preference number: 4 (lower is better)
Translates to: SRPHNPLCYRHTLGIYYSSEKPV*TEPCRM
Trigger: CATCCTGCAGGGCTCCGTGCACACAGGCTTCTCACT...AGAGTAATATATACCCAGAGTATGTCTATAGCAGAGGGGGTTATGGGGGCGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR GCA 90 bp TCCCGCCCCCATAACCCCCTCTGCTATAGACATACTCTGGGTATATATTACTCTCCAGCAGCAGCCATCTaGCAGTCACTGTACCCACAG +
Preference number: 4 (lower is better)
Translates to: SRPHNPLCYRHTLGIYYSPAAAI*QSLYPQ
Trigger: CTGTGGGTACAGTGACTGGCAGATGGCTGCTGCTGG...AGAGTAATATATACCCAGAGTATGTCTATAGCAGAGGGGGTTATGGGGGCGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
CDS-3UTR GCA 90 bp CCCGCCCCCATAACCCCCTCTGCTATAGACATACTCTGGGTATATATTACTCTATCCGCACTGGTGATCTaGTTACAGGTAGCCGGGTCC +
Preference number: 4 (lower is better)
Translates to: PAPITPSAIDILWVYITLSALVI*LQVAGS
Trigger: GGACCCGGCTACCTGTAAGCAGATCACCAGTGCGGA...TAGAGTAATATATACCCAGAGTATGTCTATAGCAGAGGGGGTTATGGGGGCGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR GCA 90 bp ATGTCAGTCTACCCTCCCGCCCCCATAACCCCCTCTGCTATAGACATACTCTGGCATTTGTCACATGGCTaGTGTGTCCACCGTACTTGT +
Preference number: 4 (lower is better)
Translates to: MSVYPPAPITPSAIDILWHLSHG*CVHRTC
Trigger: ACAAGTACGGTGGACACAGCAGCCATGTGACAAATG...CCAGAGTATGTCTATAGCAGAGGGGGTTATGGGGGCGGGAGGGTAGACTGACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR GCA 90 bp CCCCATAACCCCCTCTGCTATAGACATACTCTGGGTATATATTACTCTACTCGGTCGTCTTCCTGTAACTaGAGCCGCTGCTCCAGCGCC +
Preference number: 4 (lower is better)
Translates to: PHNPLCYRHTLGIYYSTRSSSCN*SRCSSA
Trigger: GGCGCTGGAGCAGCGGCTGCAGTTACAGGAAGACGA...CCGAGTAGAGTAATATATACCCAGAGTATGTCTATAGCAGAGGGGGTTATGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536630.5
ENST00000587152.6
CDS-3UTR GCA 90 bp CCCTCTGCTATAGACATACTCTGGGTATATATTACTCTACTCGGCAATAGACATACACCGAGGCAGTGGTaGCTAAGCGCGGAGGCGCCC +
Preference number: 4 (lower is better)
Translates to: PSAIDILWVYITLLGNRHTPRQW*LSAEAP
Trigger: GGGCGCCTCCGCGCTTAGGCACCACTGCCTCGGTGT...ATGTCTATTGCCGAGTAGAGTAATATATACCCAGAGTATGTCTATAGCAGAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536630.5
ENST00000587152.6
CDS-3UTR CCA 90 bp CCCCATAACCCCCTCTGCTATAGACATACTCTGGGTATATATTACTCTACTCGGGGGTGCCAGCTCGTCTaGGATCATCATGGGCACAGG +
Preference number: 4 (lower is better)
Translates to: PHNPLCYRHTLGIYYSTRGCQLV*DHHGHR
Trigger: CCTGTGCCCATGATGATCCCAGACGAGCTGGCACCC...CCGAGTAGAGTAATATATACCCAGAGTATGTCTATAGCAGAGGGGGTTATGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CCA 90 bp AAACACCCCAAACCAAACACCAATGGATCCCCAAAGCGATGTGACTCCCTCTTCCCAGCACGTGTAAGGTaGAGAGGGAAACTGAGTCCC +
Preference number: 4 (lower is better)
Translates to: KHPKPNTNGSPKRCDSLFPARVR*RGKLSP
Trigger: GGGACTCAGTTTCCCTCTCCACCTTACACGTGCTGG...GAAGAGGGAGTCACATCGCTTTGGGGATCCATTGGTGTTTGGTTTGGGGTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CCA 90 bp CCGGAGTTGGTGACAAAGCAGCTGCTGTCCTGGGCCCAATCCAGGTGGGTGATAAGAGCATGTGATCATTaGATTCATCCACTGCACACA +
Preference number: 4 (lower is better)
Translates to: PELVTKQLLSWAQSRWVIRACDH*IHPLHT
Trigger: TGTGTGCAGTGGATGAATCCAATGATCACATGCTCT...TATCACCCACCTGGATTGGGCCCAGGACAGCAGCTGCTTTGTCACCAACTCCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586195.5
ENST00000588308.5
CDS-3UTR CCA 90 bp CCCCATAACCCCCTCTGCTATAGACATACTCTGGGTATATATTACTCTACTCGGCCACCTTGGTCTCCTTaGCCCAGTCCCACACCGAGA +
Preference number: 4 (lower is better)
Translates to: PHNPLCYRHTLGIYYSTRPPWSP*PSPTPR
Trigger: TCTCGGTGTGGGACTGGGCCAAGGAGACCAAGGTGG...CCGAGTAGAGTAATATATACCCAGAGTATGTCTATAGCAGAGGGGGTTATGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CCA 90 bp CGCCACCTTCCAAAAAGGTCACACACAGCACATACTTCGGTTTCTCATGTTTCTGTGGGGTCCGTGGGGTaGAAGGTGGCCACCAATACA +
Preference number: 4 (lower is better)
Translates to: RHLPKRSHTAHTSVSHVSVGSVG*KVATNT
Trigger: TGTATTGGTGGCCACCTTCCACCCCACGGACCCCAC...AGAAACATGAGAAACCGAAGTATGTGCTGTGTGTGACCTTTTTGGAAGGTGGCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000586195.5
ENST00000592853.5
CDS-3UTR CCA 90 bp AAAGGTCACACACAGCACATACTTCGGTTTCTCATGTTTCTCAAAGAGGCCTTGTACAGTGTGTCTCCGTaGCCCTCTGCCACGGTGCGC +
Preference number: 4 (lower is better)
Translates to: KGHTQHILRFLMFLKEALYSVSP*PSATVR
Trigger: GCGCACCGTGGCAGAGGGCCACGGAGACACACTGTA...CAAGGCCTCTTTGAGAAACATGAGAAACCGAAGTATGTGCTGTGTGTGACCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586195.5
CDS-3UTR CCA 90 bp TCCCGCCCCCATAACCCCCTCTGCTATAGACATACTCTGGGTATATATTACTCTCACAGCTCTTCCACATaGCCCTGGACCAGCAGTGAG +
Preference number: 4 (lower is better)
Translates to: SRPHNPLCYRHTLGIYYSHSSST*PWTSSE
Trigger: CTCACTGCTGGTCCAGGGCCATGTGGAAGAGCTGTG...AGAGTAATATATACCCAGAGTATGTCTATAGCAGAGGGGGTTATGGGGGCGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CCA 90 bp ACCCCCTCTGCTATAGACATACTCTGGGTATATATTACTCTACTCGGCAATAGACCAGGACAGAGCCACTaGGGTGGAAGCCGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: TPSAIDILWVYITLLGNRPGQSH*GGSRLS
Trigger: GCTCAGCCGGCTTCCACCCCAGTGGCTCTGTCCTGG...TCTATTGCCGAGTAGAGTAATATATACCCAGAGTATGTCTATAGCAGAGGGGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
CDS-3UTR CCA 90 bp CCCGCCCCCATAACCCCCTCTGCTATAGACATACTCTGGGTATATATTACTCTATACACCAAGTTGTCGTaGGAGCCCACGGCCAGGTAC +
Preference number: 4 (lower is better)
Translates to: PAPITPSAIDILWVYITLYTKLS*EPTARY
Trigger: GTACCTGGCCGTGGGCTCCCACGACAACTTGGTGTA...TAGAGTAATATATACCCAGAGTATGTCTATAGCAGAGGGGGTTATGGGGGCGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
CDS-3UTR CCA 90 bp AAACCAAACACCAATGGATCCCCAAAGCGATGTGACTCCCTCTTCCCACCCGGATGGGCCCAATCCAGGTaGGTGATAAAACTGGAATGG +
Preference number: 4 (lower is better)
Translates to: KPNTNGSPKRCDSLFPPGWAQSR*VIKLEW
Trigger: CCATTCCAGTTTTATCACCCACCTGGATTGGGCCCA...TCCGGGTGGGAAGAGGGAGTCACATCGCTTTGGGGATCCATTGGTGTTTGGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CCA 90 bp CCCCATAACCCCCTCTGCTATAGACATACTCTGGGTATATATTACTCTACTCGGGCCACTGTAGCACACTaGTGTCCTTGCCCCCTGTGG +
Preference number: 4 (lower is better)
Translates to: PHNPLCYRHTLGIYYSTRATVAH*CPCPLW
Trigger: CCACAGGGGGCAAGGACACCAGTGTGCTACAGTGGC...CCGAGTAGAGTAATATATACCCAGAGTATGTCTATAGCAGAGGGGGTTATGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CCA 90 bp TCCCGCCCCCATAACCCCCTCTGCTATAGACATACTCTGGGTATATATTACTCTCTTCTTGGGAGAGGATaGGGACGTGGCATAGCCACC +
Preference number: 4 (lower is better)
Translates to: SRPHNPLCYRHTLGIYYSLLGRG*GRGIAT
Trigger: GGTGGCTATGCCACGTCCCCATCCTCTCCCAAGAAG...AGAGTAATATATACCCAGAGTATGTCTATAGCAGAGGGGGTTATGGGGGCGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000536630.5
ENST00000587152.6
CDS-3UTR CCA 90 bp GCCCCCATAACCCCCTCTGCTATAGACATACTCTGGGTATATATTACTCTACTCCGCTACAGTTGCTGCTaGAGGATGTGGTCCGGCTGC +
Preference number: 4 (lower is better)
Translates to: APITPSAIDILWVYITLLRYSCC*RMWSGC
Trigger: GCAGCCGGACCACATCCTCCAGCAGCAACTGTAGCG...GAGTAGAGTAATATATACCCAGAGTATGTCTATAGCAGAGGGGGTTATGGGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000536630.5
ENST00000587152.6
CDS-3UTR CCA 90 bp TCCCGCCCCCATAACCCCCTCTGCTATAGACATACTCTGGGTATATATTACTCTCAACCAAGGAAGCCCTaGTTCCCAGCCTGGTGGAAG +
Preference number: 4 (lower is better)
Translates to: SRPHNPLCYRHTLGIYYSQPRKP*FPAWWK
Trigger: CTTCCACCAGGCTGGGAACCAGGGCTTCCTTGGTTG...AGAGTAATATATACCCAGAGTATGTCTATAGCAGAGGGGGTTATGGGGGCGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000536630.5
CDS-3UTR TCA 90 bp ACCCCAAACCAAACACCAATGGATCCCCAAAGCGATGTGACTCCCTCTTCCCACCACACCGAGAGCATGTaGTCATTGGATTCATCCACT +
Preference number: 4 (lower is better)
Translates to: TPNQTPMDPQSDVTPSSHHTESM*SLDSST
Trigger: AGTGGATGAATCCAATGATCACATGCTCTCGGTGTG...GTGGGAAGAGGGAGTCACATCGCTTTGGGGATCCATTGGTGTTTGGTTTGGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR TCA 90 bp CCCTCTGCTATAGACATACTCTGGGTATATATTACTCTACTCGGCAATAGACATGGGCAGGGTCCTCGATaGTCCTGCTCCACAGGGGCT +
Preference number: 4 (lower is better)
Translates to: PSAIDILWVYITLLGNRHGQGPR*SCSTGA
Trigger: AGCCCCTGTGGAGCAGGATCATCGAGGACCCTGCCC...ATGTCTATTGCCGAGTAGAGTAATATATACCCAGAGTATGTCTATAGCAGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
CDS-3UTR GCA 90 bp AAACACCCCAAACCAAACACCAATGGATCCCCAAAGCGATGTGACTCCCTCTTCCCACTTCCTGCAGCTTaGTGTAGTCAGAACCCCAGA +
Preference number: 4 (lower is better)
Translates to: KHPKPNTNGSPKRCDSLFPLPAA*CSQNPR
Trigger: TCTGGGGTTCTGACTACAGCAAGCTGCAGGAAGTGG...GAAGAGGGAGTCACATCGCTTTGGGGATCCATTGGTGTTTGGTTTGGGGTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR GCA 90 bp CCCTCTGCTATAGACATACTCTGGGTATATATTACTCTACTCGGCAATAGACATGGCCCTCTGCCACGGTaGGCACAGGGCCAAAGTCCT +
Preference number: 4 (lower is better)
Translates to: PSAIDILWVYITLLGNRHGPLPR*AQGQSP
Trigger: AGGACTTTGGCCCTGTGCGCACCGTGGCAGAGGGCC...ATGTCTATTGCCGAGTAGAGTAATATATACCCAGAGTATGTCTATAGCAGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR GCA 90 bp CCCCATAACCCCCTCTGCTATAGACATACTCTGGGTATATATTACTCTACTCGGCCTGCAGGATGGAATTaGGGGTGGTCCCCACGTACA +
Preference number: 4 (lower is better)
Translates to: PHNPLCYRHTLGIYYSTRPAGWN*GWSPRT
Trigger: TGTACGTGGGGACCACCCGCAATTCCATCCTGCAGG...CCGAGTAGAGTAATATATACCCAGAGTATGTCTATAGCAGAGGGGGTTATGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR GCA 90 bp ACCCCCTCTGCTATAGACATACTCTGGGTATATATTACTCTACTCGGCAATAGATCCCTGTTCTTCGCATaGCCGCAGGCGACGCAGAGC +
Preference number: 4 (lower is better)
Translates to: TPSAIDILWVYITLLGNRSLFFA*PQATQS
Trigger: GCTCTGCGTCGCCTGCGGGCATGCGAAGAACAGGGA...TCTATTGCCGAGTAGAGTAATATATACCCAGAGTATGTCTATAGCAGAGGGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000536630.5
ENST00000587152.6
CDS-3UTR GCA 90 bp AAACCAAACACCAATGGATCCCCAAAGCGATGTGACTCCCTCTTCCCACCCGGAACAAATTGTCATCGTTaGAGTATCGCAGCAGCGAGG +
Preference number: 4 (lower is better)
Translates to: KPNTNGSPKRCDSLFPPGTNCHR*SIAAAR
Trigger: CCTCGCTGCTGCGATACTGCAACGATGACAATTTGT...TCCGGGTGGGAAGAGGGAGTCACATCGCTTTGGGGATCCATTGGTGTTTGGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587152.6
CDS-3UTR CCA 90 bp AAACCAAACACCAATGGATCCCCAAAGCGATGTGACTCCCTCTTCCCACCCGGAGATGGTGACCATATCTaGGTGGATGGCCAAGCATTT +
Preference number: 4 (lower is better)
Translates to: KPNTNGSPKRCDSLFPPGDGDHI*VDGQAF
Trigger: AAATGCTTGGCCATCCACCCAGATATGGTCACCATC...TCCGGGTGGGAAGAGGGAGTCACATCGCTTTGGGGATCCATTGGTGTTTGGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CCA 90 bp TCCCGCCCCCATAACCCCCTCTGCTATAGACATACTCTGGGTATATATTACTCTCCAGCACGTGTAAGGTaGAGAGGGAAACTGAGTCCC +
Preference number: 4 (lower is better)
Translates to: SRPHNPLCYRHTLGIYYSPARVR*RGKLSP
Trigger: GGGACTCAGTTTCCCTCTCCACCTTACACGTGCTGG...AGAGTAATATATACCCAGAGTATGTCTATAGCAGAGGGGGTTATGGGGGCGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CCA 90 bp CCCCATAACCCCCTCTGCTATAGACATACTCTGGGTATATATTACTCTACTCGGCCGTGGGGTGGAAGGTaGCCACCAATACAGCCTCAT +
Preference number: 4 (lower is better)
Translates to: PHNPLCYRHTLGIYYSTRPWGGR*PPIQPH
Trigger: ATGAGGCTGTATTGGTGGCCACCTTCCACCCCACGG...CCGAGTAGAGTAATATATACCCAGAGTATGTCTATAGCAGAGGGGGTTATGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CCA 90 bp GCCCCCATAACCCCCTCTGCTATAGACATACTCTGGGTATATATTACTCTACTCCCGTGGGGTGGAAGGTaGCCACCAATACAGCCTCAT +
Preference number: 4 (lower is better)
Translates to: APITPSAIDILWVYITLLPWGGR*PPIQPH
Trigger: ATGAGGCTGTATTGGTGGCCACCTTCCACCCCACGG...GAGTAGAGTAATATATACCCAGAGTATGTCTATAGCAGAGGGGGTTATGGGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CCA 90 bp AAAGGTCACACACAGCACATACTTCGGTTTCTCATGTTTCTCAAAGAGGCCTTGGTGGGGTCCGTGGGGTaGAAGGTGGCCACCAATACA +
Preference number: 4 (lower is better)
Translates to: KGHTQHILRFLMFLKEALVGSVG*KVATNT
Trigger: TGTATTGGTGGCCACCTTCCACCCCACGGACCCCAC...CAAGGCCTCTTTGAGAAACATGAGAAACCGAAGTATGTGCTGTGTGTGACCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586195.5
ENST00000592853.5
CDS-3UTR CCA 90 bp ATAGACATACTCTGGGTATATATTACTCTACTCGGCAATAGACATCTCCCGAAACAAACTGGGCCCGACTaGGGTGTGTGGCCAGGCCCC +
Preference number: 4 (lower is better)
Translates to: IDILWVYITLLGNRHLPKQTGPD*GVWPGP
Trigger: GGGGCCTGGCCACACACCCCAGTCGGGCCCAGTTTG...TTTCGGGAGATGTCTATTGCCGAGTAGAGTAATATATACCCAGAGTATGTCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CCA 90 bp GCCCCCATAACCCCCTCTGCTATAGACATACTCTGGGTATATATTACTCTACTCCTGCTCCACAGGGGCTaGTGGGAATCTGAGCTCCAT +
Preference number: 4 (lower is better)
Translates to: APITPSAIDILWVYITLLLLHRG*WESELH
Trigger: ATGGAGCTCAGATTCCCACCAGCCCCTGTGGAGCAG...GAGTAGAGTAATATATACCCAGAGTATGTCTATAGCAGAGGGGGTTATGGGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CCA 90 bp CCCTCTGCTATAGACATACTCTGGGTATATATTACTCTACTCGGCAATAGACATACAGAGCCACTGGGGTaGAAGCCGGCTGAGCGGGCA +
Preference number: 4 (lower is better)
Translates to: PSAIDILWVYITLLGNRHTEPLG*KPAERA
Trigger: TGCCCGCTCAGCCGGCTTCCACCCCAGTGGCTCTGT...ATGTCTATTGCCGAGTAGAGTAATATATACCCAGAGTATGTCTATAGCAGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
CDS-3UTR CCA 90 bp CCCTCTGCTATAGACATACTCTGGGTATATATTACTCTACTCGGCAATAGACATCCAGGACAGAGCCACTaGGGTGGAAGCCGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: PSAIDILWVYITLLGNRHPGQSH*GGSRLS
Trigger: GCTCAGCCGGCTTCCACCCCAGTGGCTCTGTCCTGG...ATGTCTATTGCCGAGTAGAGTAATATATACCCAGAGTATGTCTATAGCAGAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
CDS-3UTR CCA 90 bp AAACACCCCAAACCAAACACCAATGGATCCCCAAAGCGATGTGACTCCCTCTTCTCATTGCCGTCTGTGTaGATAGCCACCAGGTCATGG +
Preference number: 4 (lower is better)
Translates to: KHPKPNTNGSPKRCDSLFSLPSV*IATRSW
Trigger: CCATGACCTGGTGGCTATCCACACAGACGGCAATGA...GAAGAGGGAGTCACATCGCTTTGGGGATCCATTGGTGTTTGGTTTGGGGTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CCA 90 bp GCCCCCATAACCCCCTCTGCTATAGACATACTCTGGGTATATATTACTCTACTCTACACCAAGTTGTCGTaGGAGCCCACGGCCAGGTAC +
Preference number: 4 (lower is better)
Translates to: APITPSAIDILWVYITLLYTKLS*EPTARY
Trigger: GTACCTGGCCGTGGGCTCCCACGACAACTTGGTGTA...GAGTAGAGTAATATATACCCAGAGTATGTCTATAGCAGAGGGGGTTATGGGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
CDS-3UTR CCA 90 bp CCTGCAGGATGGAATTGCGGGTGGTCCCCACGTACAGTGTGTCTCCGTGGCCCTGCTATAGACATACTCTaGGTATATATTACTCTACTC +
Preference number: 4 (lower is better)
Translates to: PAGWNCGWSPRTVCLRGPAIDIL*VYITLL
Trigger: GAGTAGAGTAATATATACCCAGAGTATGTCTATAGC...AGGGCCACGGAGACACACTGTACGTGGGGACCACCCGCAATTCCATCCTGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586195.5
CDS-3UTR TCA 90 bp CCCTCTGCTATAGACATACTCTGGGTATATATTACTCTACTCGGCAATAGACATGCCCTGGACCAGCAGTaGGAAGCCTGTGTGCACGGA +
Preference number: 4 (lower is better)
Translates to: PSAIDILWVYITLLGNRHALDQQ*EACVHG
Trigger: TCCGTGCACACAGGCTTCTCACTGCTGGTCCAGGGC...ATGTCTATTGCCGAGTAGAGTAATATATACCCAGAGTATGTCTATAGCAGAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR TCA 90 bp TCCCGCCCCCATAACCCCCTCTGCTATAGACATACTCTGGGTATATATTACTCTGGAGAAGCTGACCACTaGGATCTGTTCATTGCCGTC +
Preference number: 4 (lower is better)
Translates to: SRPHNPLCYRHTLGIYYSGEADH*DLFIAV
Trigger: GACGGCAATGAACAGATCTCAGTGGTCAGCTTCTCC...AGAGTAATATATACCCAGAGTATGTCTATAGCAGAGGGGGTTATGGGGGCGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR TCA 90 bp TCTGCTATAGACATACTCTGGGTATATATTACTCTACTCGGCAATAGACATCTCAGCGGGCCACAGCGTTaGTATCAGTGCCGTCCGCCC +
Preference number: 4 (lower is better)
Translates to: SAIDILWVYITLLGNRHLSGPQR*YQCRPP
Trigger: GGGCGGACGGCACTGATATCAACGCTGTGGCCCGCT...GAGATGTCTATTGCCGAGTAGAGTAATATATACCCAGAGTATGTCTATAGCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR TCA 90 bp CCCGCCCCCATAACCCCCTCTGCTATAGACATACTCTGGGTATATATTACTCTAATAGAATTCCTGCCCTaGCACCTGACTCTTCCCTGG +
Preference number: 4 (lower is better)
Translates to: PAPITPSAIDILWVYITLIEFLP*HLTLPW
Trigger: CCAGGGAAGAGTCAGGTGTCAGGGCAGGAATTCTAT...TAGAGTAATATATACCCAGAGTATGTCTATAGCAGAGGGGGTTATGGGGGCGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR GCA 90 bp TACCCTCCCGCCCCCATAACCCCCTCTGCTATAGACATACTCTGGGTATATATTCCCCATAACCCCCTCTaGTATAGACATACTCTGGGT +
Preference number: 4 (lower is better)
Translates to: YPPAPITPSAIDILWVYIPHNPL*YRHTLG
Trigger: ACCCAGAGTATGTCTATAGCAGAGGGGGTTATGGGG...AATATATACCCAGAGTATGTCTATAGCAGAGGGGGTTATGGGGGCGGGAGGGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR GCA 90 bp ATACTCTGGGTATATATTACTCTACTCGGCAATAGACATCTCCCGAAAATAGAAACACCGAGGCAGTGGTaGCTAAGCGCGGAGGCGCCC +
Preference number: 4 (lower is better)
Translates to: ILWVYITLLGNRHLPKIETPRQW*LSAEAP
Trigger: GGGCGCCTCCGCGCTTAGGCACCACTGCCTCGGTGT...TTCTATTTTCGGGAGATGTCTATTGCCGAGTAGAGTAATATATACCCAGAGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536630.5
ENST00000587152.6
CDS-3UTR GCA 90 bp CCCTCTGCTATAGACATACTCTGGGTATATATTACTCTACTCGGCAATAGACATGGCCCTGCCTCCCGTTaGCATAGCAACGCCCTTCGT +
Preference number: 4 (lower is better)
Translates to: PSAIDILWVYITLLGNRHGPASR*HSNALR
Trigger: ACGAAGGGCGTTGCTATGGCAACGGGAGGCAGGGCC...ATGTCTATTGCCGAGTAGAGTAATATATACCCAGAGTATGTCTATAGCAGAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587152.6
CDS-3UTR CCA 90 bp ACCCCCTCTGCTATAGACATACTCTGGGTATATATTACTCTACTCGGCAATAGAGGGTGCCAGCTCGTCTaGGATCATCATGGGCACAGG +
Preference number: 4 (lower is better)
Translates to: TPSAIDILWVYITLLGNRGCQLV*DHHGHR
Trigger: CCTGTGCCCATGATGATCCCAGACGAGCTGGCACCC...TCTATTGCCGAGTAGAGTAATATATACCCAGAGTATGTCTATAGCAGAGGGGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CCA 90 bp GCCACCTTCCAAAAAGGTCACACACAGCACATACTTCGGTTTCTCATGTTTCTCCCAGCACGTGTAAGGTaGAGAGGGAAACTGAGTCCC +
Preference number: 4 (lower is better)
Translates to: ATFQKGHTQHILRFLMFLPARVR*RGKLSP
Trigger: GGGACTCAGTTTCCCTCTCCACCTTACACGTGCTGG...GAGAAACATGAGAAACCGAAGTATGTGCTGTGTGTGACCTTTTTGGAAGGTGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586195.5
ENST00000592853.5
CDS-3UTR CCA 90 bp CTCTGGGTATATATTACTCTACTCGGCAATAGACATCTCCCGAAAATAGAATTCGCACAGTGGGGTCCGTaGGGTGGAAGGTGGCCACCA +
Preference number: 4 (lower is better)
Translates to: LWVYITLLGNRHLPKIEFAQWGP*GGRWPP
Trigger: TGGTGGCCACCTTCCACCCCACGGACCCCACTGTGC...GAATTCTATTTTCGGGAGATGTCTATTGCCGAGTAGAGTAATATATACCCAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CCA 90 bp GCCCCCATAACCCCCTCTGCTATAGACATACTCTGGGTATATATTACTCTACTCGGATGGAATTGCGGGTaGTCCCCACGTACAGTGTGT +
Preference number: 4 (lower is better)
Translates to: APITPSAIDILWVYITLLGWNCG*SPRTVC
Trigger: ACACACTGTACGTGGGGACCACCCGCAATTCCATCC...GAGTAGAGTAATATATACCCAGAGTATGTCTATAGCAGAGGGGGTTATGGGGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CCA 90 bp CCCCATAACCCCCTCTGCTATAGACATACTCTGGGTATATATTACTCTACTCGGCTCCACAGGGGCTGGTaGGAATCTGAGCTCCATAGA +
Preference number: 4 (lower is better)
Translates to: PHNPLCYRHTLGIYYSTRLHRGW*ESELHR
Trigger: TCTATGGAGCTCAGATTCCCACCAGCCCCTGTGGAG...CCGAGTAGAGTAATATATACCCAGAGTATGTCTATAGCAGAGGGGGTTATGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CCA 90 bp ATAGACATACTCTGGGTATATATTACTCTACTCGGCAATAGACATCTCCCGAAACCAGGACAGAGCCACTaGGGTGGAAGCCGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: IDILWVYITLLGNRHLPKPGQSH*GGSRLS
Trigger: GCTCAGCCGGCTTCCACCCCAGTGGCTCTGTCCTGG...TTTCGGGAGATGTCTATTGCCGAGTAGAGTAATATATACCCAGAGTATGTCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
CDS-3UTR CCA 90 bp TCCCGCCCCCATAACCCCCTCTGCTATAGACATACTCTGGGTATATATTACTCTTCATTGCCGTCTGTGTaGATAGCCACCAGGTCATGG +
Preference number: 4 (lower is better)
Translates to: SRPHNPLCYRHTLGIYYSSLPSV*IATRSW
Trigger: CCATGACCTGGTGGCTATCCACACAGACGGCAATGA...AGAGTAATATATACCCAGAGTATGTCTATAGCAGAGGGGGTTATGGGGGCGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CCA 90 bp AAACACCCCAAACCAAACACCAATGGATCCCCAAAGCGATGTGACTCCCTCTTCTGGGCCCAATCCAGGTaGGTGATAAAACTGGAATGG +
Preference number: 4 (lower is better)
Translates to: KHPKPNTNGSPKRCDSLFWAQSR*VIKLEW
Trigger: CCATTCCAGTTTTATCACCCACCTGGATTGGGCCCA...GAAGAGGGAGTCACATCGCTTTGGGGATCCATTGGTGTTTGGTTTGGGGTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CCA 90 bp CTCTGGGTATATATTACTCTACTCGGCAATAGACATCTCCCGAAAATAGAATTCGACACACCGAGGCAGTaGTGCCTAAGCGCGGAGGCG +
Preference number: 4 (lower is better)
Translates to: LWVYITLLGNRHLPKIEFDTPRQ*CLSAEA
Trigger: CGCCTCCGCGCTTAGGCACCACTGCCTCGGTGTGTC...GAATTCTATTTTCGGGAGATGTCTATTGCCGAGTAGAGTAATATATACCCAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536630.5
ENST00000587152.6
CDS-3UTR TCA 90 bp GCCCCCATAACCCCCTCTGCTATAGACATACTCTGGGTATATATTACTCTACTCCCTCATTGGAGCACTTaGCATCCACCACCTTGGTCT +
Preference number: 4 (lower is better)
Translates to: APITPSAIDILWVYITLLPHWST*HPPPWS
Trigger: AGACCAAGGTGGTGGATGTCAAGTGCTCCAATGAGG...GAGTAGAGTAATATATACCCAGAGTATGTCTATAGCAGAGGGGGTTATGGGGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR TCA 90 bp CCCTCTGCTATAGACATACTCTGGGTATATATTACTCTACTCGGCAATAGACATCCAGCACCGCCTGTGTaGTACGGTTCCCACCTTTGC +
Preference number: 4 (lower is better)
Translates to: PSAIDILWVYITLLGNRHPAPPV*YGSHLC
Trigger: GCAAAGGTGGGAACCGTATCACACAGGCGGTGCTGG...ATGTCTATTGCCGAGTAGAGTAATATATACCCAGAGTATGTCTATAGCAGAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR TCA 90 bp GCCCCCATAACCCCCTCTGCTATAGACATACTCTGGGTATATATTACTCTACTCGCCAAAGTCATCAGCTaGAGCCAGCAACTTCCCATC +
Preference number: 4 (lower is better)
Translates to: APITPSAIDILWVYITLLAKVIS*SQQLPI
Trigger: GATGGGAAGTTGCTGGCTTCAGCTGATGACTTTGGC...GAGTAGAGTAATATATACCCAGAGTATGTCTATAGCAGAGGGGGTTATGGGGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR TCA 90 bp CCCTCTGCTATAGACATACTCTGGGTATATATTACTCTACTCGGCAATAGACATATCCCCAAAGCGATGTaGCTCCCTCTTCCCACCCGG +
Preference number: 4 (lower is better)
Translates to: PSAIDILWVYITLLGNRHIPKAM*LPLPTR
Trigger: CCGGGTGGGAAGAGGGAGTCACATCGCTTTGGGGAT...ATGTCTATTGCCGAGTAGAGTAATATATACCCAGAGTATGTCTATAGCAGAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR GCA 90 bp ACCCCCTCTGCTATAGACATACTCTGGGTATATATTACTCTACTCGGCAATAGACAGGCTGTAGGTGGGTaGCAGCTCGTCTGGGATCAT +
Preference number: 4 (lower is better)
Translates to: TPSAIDILWVYITLLGNRQAVGG*QLVWDH
Trigger: ATGATCCCAGACGAGCTGGCACCCACCTACAGCCTG...TCTATTGCCGAGTAGAGTAATATATACCCAGAGTATGTCTATAGCAGAGGGGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR GCA 90 bp TCTGCTATAGACATACTCTGGGTATATATTACTCTACTCGGCAATAGACATCTCGCCGCTTGCTCAAGCTaGCCCCCTCCAAGGTCCAGA +
Preference number: 4 (lower is better)
Translates to: SAIDILWVYITLLGNRHLAACSS*PPPRSR
Trigger: TCTGGACCTTGGAGGGGGGCAGCTTGAGCAAGCGGC...GAGATGTCTATTGCCGAGTAGAGTAATATATACCCAGAGTATGTCTATAGCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR GCA 90 bp CCCCATAACCCCCTCTGCTATAGACATACTCTGGGTATATATTACTCTACTCGGCCACTTCCTGCAGCTTaGTGTAGTCAGAACCCCAGA +
Preference number: 4 (lower is better)
Translates to: PHNPLCYRHTLGIYYSTRPLPAA*CSQNPR
Trigger: TCTGGGGTTCTGACTACAGCAAGCTGCAGGAAGTGG...CCGAGTAGAGTAATATATACCCAGAGTATGTCTATAGCAGAGGGGGTTATGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR GCA 90 bp ATACTCTGGGTATATATTACTCTACTCGGCAATAGACATCTCCCGAAAATAGAAGGCCCTCTGCCACGGTaGGCACAGGGCCAAAGTCCT +
Preference number: 4 (lower is better)
Translates to: ILWVYITLLGNRHLPKIEGPLPR*AQGQSP
Trigger: AGGACTTTGGCCCTGTGCGCACCGTGGCAGAGGGCC...TTCTATTTTCGGGAGATGTCTATTGCCGAGTAGAGTAATATATACCCAGAGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR GCA 90 bp GCCCCCATAACCCCCTCTGCTATAGACATACTCTGGGTATATATTACTCTACTCTCTGAGCTCCATAGATaGACCAGCTTATCCTGCCCG +
Preference number: 4 (lower is better)
Translates to: APITPSAIDILWVYITLLSELHR*TSLSCP
Trigger: CGGGCAGGATAAGCTGGTGCATCTATGGAGCTCAGA...GAGTAGAGTAATATATACCCAGAGTATGTCTATAGCAGAGGGGGTTATGGGGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR GCA 90 bp CCCCATAACCCCCTCTGCTATAGACATACTCTGGGTATATATTACTCTACTCGGTCTGAGCTCCATAGATaGACCAGCTTATCCTGCCCG +
Preference number: 4 (lower is better)
Translates to: PHNPLCYRHTLGIYYSTRSELHR*TSLSCP
Trigger: CGGGCAGGATAAGCTGGTGCATCTATGGAGCTCAGA...CCGAGTAGAGTAATATATACCCAGAGTATGTCTATAGCAGAGGGGGTTATGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR GCA 90 bp TCCCGCCCCCATAACCCCCTCTGCTATAGACATACTCTGGGTATATATTACTCTCTTCCATACCGCTCGTaGCCGACAAATTGTCATCCA +
Preference number: 4 (lower is better)
Translates to: SRPHNPLCYRHTLGIYYSLPYRS*PTNCHP
Trigger: TGGATGACAATTTGTCGGGCACGAGCGGTATGGAAG...AGAGTAATATATACCCAGAGTATGTCTATAGCAGAGGGGGTTATGGGGGCGGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000536630.5
CDS-3UTR CCA 90 bp TCTGCTATAGACATACTCTGGGTATATATTACTCTACTCGGCAATAGACATCTCCGTCTGGGATCATCATaGGCACAGGGCGGCCCCTCA +
Preference number: 4 (lower is better)
Translates to: SAIDILWVYITLLGNRHLRLGSS*AQGGPS
Trigger: TGAGGGGCCGCCCTGTGCCCATGATGATCCCAGACG...GAGATGTCTATTGCCGAGTAGAGTAATATATACCCAGAGTATGTCTATAGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CCA 90 bp TACCCTCCCGCCCCCATAACCCCCTCTGCTATAGACATACTCTGGGTATATATTGTGACCATATCTGGGTaGATGGCCAAGCATTTGATG +
Preference number: 4 (lower is better)
Translates to: YPPAPITPSAIDILWVYIVTISG*MAKHLM
Trigger: CATCAAATGCTTGGCCATCCACCCAGATATGGTCAC...AATATATACCCAGAGTATGTCTATAGCAGAGGGGGTTATGGGGGCGGGAGGGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CCA 90 bp ACCCCAAACCAAACACCAATGGATCCCCAAAGCGATGTGACTCCCTCTTCCCACAGAGCATGTGATCATTaGATTCATCCACTGCACACA +
Preference number: 4 (lower is better)
Translates to: TPNQTPMDPQSDVTPSSHRACDH*IHPLHT
Trigger: TGTGTGCAGTGGATGAATCCAATGATCACATGCTCT...GTGGGAAGAGGGAGTCACATCGCTTTGGGGATCCATTGGTGTTTGGTTTGGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CCA 90 bp ATAGACATACTCTGGGTATATATTACTCTACTCGGCAATAGACATCTCCCGAAATACAGTGTGTCTCCGTaGCCCTCTGCCACGGTGCGC +
Preference number: 4 (lower is better)
Translates to: IDILWVYITLLGNRHLPKYSVSP*PSATVR
Trigger: GCGCACCGTGGCAGAGGGCCACGGAGACACACTGTA...TTTCGGGAGATGTCTATTGCCGAGTAGAGTAATATATACCCAGAGTATGTCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CCA 90 bp CTCTGGGTATATATTACTCTACTCGGCAATAGACATCTCCCGAAAATAGAATTCCGGAGCCCTGCAGGATaGAATTGCGGGTGGTCCCCA +
Preference number: 4 (lower is better)
Translates to: LWVYITLLGNRHLPKIEFRSPAG*NCGWSP
Trigger: TGGGGACCACCCGCAATTCCATCCTGCAGGGCTCCG...GAATTCTATTTTCGGGAGATGTCTATTGCCGAGTAGAGTAATATATACCCAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CCA 90 bp AAAGGTCACACACAGCACATACTTCGGTTTCTCATGTTTCTCAAAGAGGCCTTGTCTTCCACATGGCCCTaGACCAGCAGTGAGAAGCCT +
Preference number: 4 (lower is better)
Translates to: KGHTQHILRFLMFLKEALSSTWP*TSSEKP
Trigger: AGGCTTCTCACTGCTGGTCCAGGGCCATGTGGAAGA...CAAGGCCTCTTTGAGAAACATGAGAAACCGAAGTATGTGCTGTGTGTGACCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586195.5
CDS-3UTR CCA 90 bp ACCCCCTCTGCTATAGACATACTCTGGGTATATATTACTCTACTCGGCAATAGACACAGCTCTTCCACATaGCCCTGGACCAGCAGTGAG +
Preference number: 4 (lower is better)
Translates to: TPSAIDILWVYITLLGNRHSSST*PWTSSE
Trigger: CTCACTGCTGGTCCAGGGCCATGTGGAAGAGCTGTG...TCTATTGCCGAGTAGAGTAATATATACCCAGAGTATGTCTATAGCAGAGGGGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CCA 90 bp TCTGCTATAGACATACTCTGGGTATATATTACTCTACTCGGCAATAGACATCTCCCGCAGGTCACAAACTaGGCCCGACTGGGGTGTGTG +
Preference number: 4 (lower is better)
Translates to: SAIDILWVYITLLGNRHLPQVTN*ARLGCV
Trigger: CACACACCCCAGTCGGGCCCAGTTTGTGACCTGCGG...GAGATGTCTATTGCCGAGTAGAGTAATATATACCCAGAGTATGTCTATAGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CCA 90 bp ACCCCCTCTGCTATAGACATACTCTGGGTATATATTACTCTACTCGGCAATAGACTGCTCCACAGGGGCTaGTGGGAATCTGAGCTCCAT +
Preference number: 4 (lower is better)
Translates to: TPSAIDILWVYITLLGNRLLHRG*WESELH
Trigger: ATGGAGCTCAGATTCCCACCAGCCCCTGTGGAGCAG...TCTATTGCCGAGTAGAGTAATATATACCCAGAGTATGTCTATAGCAGAGGGGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CCA 90 bp ACCCCCTCTGCTATAGACATACTCTGGGTATATATTACTCTACTCGGCAATAGAATAGCCACCAGGTCATaGGTCTCCGTGTCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: TPSAIDILWVYITLLGNRIATRS*VSVSSS
Trigger: GCTGCTGGACACGGAGACCCATGACCTGGTGGCTAT...TCTATTGCCGAGTAGAGTAATATATACCCAGAGTATGTCTATAGCAGAGGGGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CCA 90 bp CAGCAACTTCCCATCATGAGAGCGGGCCACAGCGTTGATATCAGTGCCGTCCGCGCTATAGACATACTCTaGGTATATATTACTCTACTC +
Preference number: 4 (lower is better)
Translates to: QQLPIMRAGHSVDISAVRAIDIL*VYITLL
Trigger: GAGTAGAGTAATATATACCCAGAGTATGTCTATAGC...GCGGACGGCACTGATATCAACGCTGTGGCCCGCTCTCATGATGGGAAGTTGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586195.5
ENST00000588308.5
CDS-3UTR CCA 90 bp ACCACGTCGCCACCTTCCAAAAAGGTCACACACAGCACATACTTCGGTTTCTCACCAATACAGCCTCATTaGAGCACTGTAGTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: TTSPPSKKVTHSTYFGFSPIQPH*STVVSA
Trigger: AGCTGAGACTACAGTGCTCCAATGAGGCTGTATTGG...TGAGAAACCGAAGTATGTGCTGTGTGTGACCTTTTTGGAAGGTGGCGACGTGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592853.5
CDS-3UTR TCA 90 bp CTCTGGGTATATATTACTCTACTCGGCAATAGACATCTCCCGAAAATAGAATTCAGACCCACTCCAGCTTaGGCCGGCAAGAAGGCAGCT +
Preference number: 4 (lower is better)
Translates to: LWVYITLLGNRHLPKIEFRPTPA*AGKKAA
Trigger: AGCTGCCTTCTTGCCGGCTCAAGCTGGAGTGGGTCT...GAATTCTATTTTCGGGAGATGTCTATTGCCGAGTAGAGTAATATATACCCAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR TCA 90 bp TCTGCTATAGACATACTCTGGGTATATATTACTCTACTCGGCAATAGACATCTCGTCCCGTGGCGATGGTaGCCATATCTGGGTGGATGG +
Preference number: 4 (lower is better)
Translates to: SAIDILWVYITLLGNRHLVPWRW*PYLGGW
Trigger: CCATCCACCCAGATATGGTCACCATCGCCACGGGAC...GAGATGTCTATTGCCGAGTAGAGTAATATATACCCAGAGTATGTCTATAGCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR TCA 90 bp TCTGCTATAGACATACTCTGGGTATATATTACTCTACTCGGCAATAGACATCTCGGTGGAGAGGGAAACTaGGTCCCAGATGCGCACGTG +
Preference number: 4 (lower is better)
Translates to: SAIDILWVYITLLGNRHLGGEGN*VPDAHV
Trigger: CACGTGCGCATCTGGGACTCAGTTTCCCTCTCCACC...GAGATGTCTATTGCCGAGTAGAGTAATATATACCCAGAGTATGTCTATAGCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR TCA 90 bp CTCTGGGTATATATTACTCTACTCGGCAATAGACATCTCCCGAAAATAGAATTCCCAGCACCGCCTGTGTaGTACGGTTCCCACCTTTGC +
Preference number: 4 (lower is better)
Translates to: LWVYITLLGNRHLPKIEFPAPPV*YGSHLC
Trigger: GCAAAGGTGGGAACCGTATCACACAGGCGGTGCTGG...GAATTCTATTTTCGGGAGATGTCTATTGCCGAGTAGAGTAATATATACCCAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR TCA 90 bp CTCTGGGTATATATTACTCTACTCGGCAATAGACATCTCCCGAAAATAGAATTCATCCCCAAAGCGATGTaGCTCCCTCTTCCCACCCGG +
Preference number: 4 (lower is better)
Translates to: LWVYITLLGNRHLPKIEFIPKAM*LPLPTR
Trigger: CCGGGTGGGAAGAGGGAGTCACATCGCTTTGGGGAT...GAATTCTATTTTCGGGAGATGTCTATTGCCGAGTAGAGTAATATATACCCAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR TCA 90 bp ACCCCCTCTGCTATAGACATACTCTGGGTATATATTACTCTACTCGGCAATAGAGCCCTGGGGAGAAGCTaGCCACTGAGATCTGTTCAT +
Preference number: 4 (lower is better)
Translates to: TPSAIDILWVYITLLGNRALGRS*PLRSVH
Trigger: ATGAACAGATCTCAGTGGTCAGCTTCTCCCCAGGGC...TCTATTGCCGAGTAGAGTAATATATACCCAGAGTATGTCTATAGCAGAGGGGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588308.5
CDS-3UTR GCA 90 bp CCCTCTGCTATAGACATACTCTGGGTATATATTACTCTACTCGGCAATAGACATCAGGCTGTAGGTGGGTaGCAGCTCGTCTGGGATCAT +
Preference number: 4 (lower is better)
Translates to: PSAIDILWVYITLLGNRHQAVGG*QLVWDH
Trigger: ATGATCCCAGACGAGCTGGCACCCACCTACAGCCTG...ATGTCTATTGCCGAGTAGAGTAATATATACCCAGAGTATGTCTATAGCAGAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR GCA 90 bp TCTGCTATAGACATACTCTGGGTATATATTACTCTACTCGGCAATAGACATCTCGTGTGCACGGAGCCCTaGAGGATGGAATTGCGGGTG +
Preference number: 4 (lower is better)
Translates to: SAIDILWVYITLLGNRHLVCTEP*RMELRV
Trigger: CACCCGCAATTCCATCCTGCAGGGCTCCGTGCACAC...GAGATGTCTATTGCCGAGTAGAGTAATATATACCCAGAGTATGTCTATAGCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR GCA 90 bp CCCGCCCCCATAACCCCCTCTGCTATAGACATACTCTGGGTATATATTACTCTACATTTGTCACATGGCTaGTGTGTCCACCGTACTTGT +
Preference number: 4 (lower is better)
Translates to: PAPITPSAIDILWVYITLHLSHG*CVHRTC
Trigger: ACAAGTACGGTGGACACAGCAGCCATGTGACAAATG...TAGAGTAATATATACCCAGAGTATGTCTATAGCAGAGGGGGTTATGGGGGCGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CCA 90 bp CTCTGGGTATATATTACTCTACTCGGCAATAGACATCTCCCGAAAATAGAATTCTGTCCAGGCTGTAGGTaGGTGCCAGCTCGTCTGGGA +
Preference number: 4 (lower is better)
Translates to: LWVYITLLGNRHLPKIEFCPGCR*VPARLG
Trigger: TCCCAGACGAGCTGGCACCCACCTACAGCCTGGACA...GAATTCTATTTTCGGGAGATGTCTATTGCCGAGTAGAGTAATATATACCCAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CCA 90 bp TCTGCTATAGACATACTCTGGGTATATATTACTCTACTCGGCAATAGACATCTCTGTCCAGGCTGTAGGTaGGTGCCAGCTCGTCTGGGA +
Preference number: 4 (lower is better)
Translates to: SAIDILWVYITLLGNRHLCPGCR*VPARLG
Trigger: TCCCAGACGAGCTGGCACCCACCTACAGCCTGGACA...GAGATGTCTATTGCCGAGTAGAGTAATATATACCCAGAGTATGTCTATAGCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CCA 90 bp TCCCGCCCCCATAACCCCCTCTGCTATAGACATACTCTGGGTATATATTACTCTGTGACCATATCTGGGTaGATGGCCAAGCATTTGATG +
Preference number: 4 (lower is better)
Translates to: SRPHNPLCYRHTLGIYYSVTISG*MAKHLM
Trigger: CATCAAATGCTTGGCCATCCACCCAGATATGGTCAC...AGAGTAATATATACCCAGAGTATGTCTATAGCAGAGGGGGTTATGGGGGCGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CCA 90 bp CTCTGGGTATATATTACTCTACTCGGCAATAGACATCTCCCGAAAATAGAATTCGTGGGGTCCGTGGGGTaGAAGGTGGCCACCAATACA +
Preference number: 4 (lower is better)
Translates to: LWVYITLLGNRHLPKIEFVGSVG*KVATNT
Trigger: TGTATTGGTGGCCACCTTCCACCCCACGGACCCCAC...GAATTCTATTTTCGGGAGATGTCTATTGCCGAGTAGAGTAATATATACCCAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CCA 90 bp CCCTCTGCTATAGACATACTCTGGGTATATATTACTCTACTCGGCAATAGACATCACAGCTCTTCCACATaGCCCTGGACCAGCAGTGAG +
Preference number: 4 (lower is better)
Translates to: PSAIDILWVYITLLGNRHHSSST*PWTSSE
Trigger: CTCACTGCTGGTCCAGGGCCATGTGGAAGAGCTGTG...ATGTCTATTGCCGAGTAGAGTAATATATACCCAGAGTATGTCTATAGCAGAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CCA 90 bp CCCTCTGCTATAGACATACTCTGGGTATATATTACTCTACTCGGCAATAGACATCTGCTCCACAGGGGCTaGTGGGAATCTGAGCTCCAT +
Preference number: 4 (lower is better)
Translates to: PSAIDILWVYITLLGNRHLLHRG*WESELH
Trigger: ATGGAGCTCAGATTCCCACCAGCCCCTGTGGAGCAG...ATGTCTATTGCCGAGTAGAGTAATATATACCCAGAGTATGTCTATAGCAGAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CCA 90 bp TCTGCTATAGACATACTCTGGGTATATATTACTCTACTCGGCAATAGACATCTCCGCTACAGTTGCTGCTaGAGGATGTGGTCCGGCTGC +
Preference number: 4 (lower is better)
Translates to: SAIDILWVYITLLGNRHLRYSCC*RMWSGC
Trigger: GCAGCCGGACCACATCCTCCAGCAGCAACTGTAGCG...GAGATGTCTATTGCCGAGTAGAGTAATATATACCCAGAGTATGTCTATAGCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000536630.5
ENST00000587152.6
CDS-3UTR CCA 90 bp CCCGCCCCCATAACCCCCTCTGCTATAGACATACTCTGGGTATATATTACTCTATTTTGCCTTCCTTTTTaGCGCTACAGTTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: PAPITPSAIDILWVYITLFCLPF*RYSCCW
Trigger: CCAGCAGCAACTGTAGCGCCAAAAAGGAAGGCAAAA...TAGAGTAATATATACCCAGAGTATGTCTATAGCAGAGGGGGTTATGGGGGCGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000536630.5
ENST00000587152.6
CDS-3UTR TCA 90 bp ATACTCTGGGTATATATTACTCTACTCGGCAATAGACATCTCCCGAAAATAGAAGTCCCGTGGCGATGGTaGCCATATCTGGGTGGATGG +
Preference number: 4 (lower is better)
Translates to: ILWVYITLLGNRHLPKIEVPWRW*PYLGGW
Trigger: CCATCCACCCAGATATGGTCACCATCGCCACGGGAC...TTCTATTTTCGGGAGATGTCTATTGCCGAGTAGAGTAATATATACCCAGAGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR TCA 90 bp ATACTCTGGGTATATATTACTCTACTCGGCAATAGACATCTCCCGAAAATAGAAGGTGGAGAGGGAAACTaGGTCCCAGATGCGCACGTG +
Preference number: 4 (lower is better)
Translates to: ILWVYITLLGNRHLPKIEGGEGN*VPDAHV
Trigger: CACGTGCGCATCTGGGACTCAGTTTCCCTCTCCACC...TTCTATTTTCGGGAGATGTCTATTGCCGAGTAGAGTAATATATACCCAGAGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR TCA 90 bp GCCACCTTCCAAAAAGGTCACACACAGCACATACTTCGGTTTCTCATGTTTCTCCACACCGAGAGCATGTaGTCATTGGATTCATCCACT +
Preference number: 4 (lower is better)
Translates to: ATFQKGHTQHILRFLMFLHTESM*SLDSST
Trigger: AGTGGATGAATCCAATGATCACATGCTCTCGGTGTG...GAGAAACATGAGAAACCGAAGTATGTGCTGTGTGTGACCTTTTTGGAAGGTGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586195.5
ENST00000592853.5
CDS-3UTR TCA 90 bp ATACTCTGGGTATATATTACTCTACTCGGCAATAGACATCTCCCGAAAATAGAACCAGCACCGCCTGTGTaGTACGGTTCCCACCTTTGC +
Preference number: 4 (lower is better)
Translates to: ILWVYITLLGNRHLPKIEPAPPV*YGSHLC
Trigger: GCAAAGGTGGGAACCGTATCACACAGGCGGTGCTGG...TTCTATTTTCGGGAGATGTCTATTGCCGAGTAGAGTAATATATACCCAGAGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR TCA 90 bp ACCCCCTCTGCTATAGACATACTCTGGGTATATATTACTCTACTCGGCAATAGACGTCTGGGGAGAAGCTaGCCACTGAGATCTGTTCAT +
Preference number: 4 (lower is better)
Translates to: TPSAIDILWVYITLLGNRRLGRS*PLRSVH
Trigger: ATGAACAGATCTCAGTGGTCAGCTTCTCCCCAGACG...TCTATTGCCGAGTAGAGTAATATATACCCAGAGTATGTCTATAGCAGAGGGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
CDS-3UTR TCA 90 bp TCTGCTATAGACATACTCTGGGTATATATTACTCTACTCGGCAATAGACATCTCAGCAACTTCCCATCATaGGAGCGGGCCACAGCGTTG +
Preference number: 4 (lower is better)
Translates to: SAIDILWVYITLLGNRHLSNFPS*ERATAL
Trigger: CAACGCTGTGGCCCGCTCTCATGATGGGAAGTTGCT...GAGATGTCTATTGCCGAGTAGAGTAATATATACCCAGAGTATGTCTATAGCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR GCA 90 bp ATAGACATACTCTGGGTATATATTACTCTACTCGGCAATAGACATCTCCCGAAACCTGCAGGATGGAATTaGGGGTGGTCCCCACGTACA +
Preference number: 4 (lower is better)
Translates to: IDILWVYITLLGNRHLPKPAGWN*GWSPRT
Trigger: TGTACGTGGGGACCACCCGCAATTCCATCCTGCAGG...TTTCGGGAGATGTCTATTGCCGAGTAGAGTAATATATACCCAGAGTATGTCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR GCA 90 bp TCTGCTATAGACATACTCTGGGTATATATTACTCTACTCGGCAATAGACATCTCCCTGCAGGATGGAATTaGGGGTGGTCCCCACGTACA +
Preference number: 4 (lower is better)
Translates to: SAIDILWVYITLLGNRHLPAGWN*GWSPRT
Trigger: TGTACGTGGGGACCACCCGCAATTCCATCCTGCAGG...GAGATGTCTATTGCCGAGTAGAGTAATATATACCCAGAGTATGTCTATAGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR GCA 90 bp TCTGCTATAGACATACTCTGGGTATATATTACTCTACTCGGCAATAGACATCTCAGTGAGAAGCCTGTGTaGACGGAGCCCTGCAGGATG +
Preference number: 4 (lower is better)
Translates to: SAIDILWVYITLLGNRHLSEKPV*TEPCRM
Trigger: CATCCTGCAGGGCTCCGTGCACACAGGCTTCTCACT...GAGATGTCTATTGCCGAGTAGAGTAATATATACCCAGAGTATGTCTATAGCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR GCA 90 bp TCCAAAAAGGTCACACACAGCACATACTTCGGTTTCTCATGTTTCTCAAAGAGGTCTGAGCTCCATAGATaGACCAGCTTATCCTGCCCG +
Preference number: 4 (lower is better)
Translates to: SKKVTHSTYFGFSCFSKRSELHR*TSLSCP
Trigger: CGGGCAGGATAAGCTGGTGCATCTATGGAGCTCAGA...CCTCTTTGAGAAACATGAGAAACCGAAGTATGTGCTGTGTGTGACCTTTTTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586195.5
CDS-3UTR GCA 90 bp TCTGCTATAGACATACTCTGGGTATATATTACTCTACTCGGCAATAGACATCTCTCCGCACTGGTGATCTaGTTACAGGTAGCCGGGTCC +
Preference number: 4 (lower is better)
Translates to: SAIDILWVYITLLGNRHLSALVI*LQVAGS
Trigger: GGACCCGGCTACCTGTAAGCAGATCACCAGTGCGGA...GAGATGTCTATTGCCGAGTAGAGTAATATATACCCAGAGTATGTCTATAGCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR GCA 90 bp CCCCATAACCCCCTCTGCTATAGACATACTCTGGGTATATATTACTCTACTCGGCATTTGTCACATGGCTaGTGTGTCCACCGTACTTGT +
Preference number: 4 (lower is better)
Translates to: PHNPLCYRHTLGIYYSTRHLSHG*CVHRTC
Trigger: ACAAGTACGGTGGACACAGCAGCCATGTGACAAATG...CCGAGTAGAGTAATATATACCCAGAGTATGTCTATAGCAGAGGGGGTTATGGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR GCA 90 bp ATACTCTGGGTATATATTACTCTACTCGGCAATAGACATCTCCCGAAAATAGAATGGCGCTACAGTTGCTaGTGGAGGATGTGGTCCGGC +
Preference number: 4 (lower is better)
Translates to: ILWVYITLLGNRHLPKIEWRYSC*WRMWSG
Trigger: GCCGGACCACATCCTCCAGCAGCAACTGTAGCGCCA...TTCTATTTTCGGGAGATGTCTATTGCCGAGTAGAGTAATATATACCCAGAGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000536630.5
ENST00000587152.6
CDS-3UTR CCA 90 bp CTCTGGGTATATATTACTCTACTCGGCAATAGACATCTCCCGAAAATAGAATTCGCAGCAAATAAAGGTTaGCCCGGCAGTCTCGGCCAC +
Preference number: 4 (lower is better)
Translates to: LWVYITLLGNRHLPKIEFAANKG*PGSLGH
Trigger: GTGGCCGAGACTGCCGGGCCAACCTTTATTTGCTGC...GAATTCTATTTTCGGGAGATGTCTATTGCCGAGTAGAGTAATATATACCCAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CCA 90 bp CCCCATAACCCCCTCTGCTATAGACATACTCTGGGTATATATTACTCTACTCGGGTGACCATATCTGGGTaGATGGCCAAGCATTTGATG +
Preference number: 4 (lower is better)
Translates to: PHNPLCYRHTLGIYYSTRVTISG*MAKHLM
Trigger: CATCAAATGCTTGGCCATCCACCCAGATATGGTCAC...CCGAGTAGAGTAATATATACCCAGAGTATGTCTATAGCAGAGGGGGTTATGGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CCA 90 bp ATACTCTGGGTATATATTACTCTACTCGGCAATAGACATCTCCCGAAAATAGAACCACCTTGGTCTCCTTaGCCCAGTCCCACACCGAGA +
Preference number: 4 (lower is better)
Translates to: ILWVYITLLGNRHLPKIEPPWSP*PSPTPR
Trigger: TCTCGGTGTGGGACTGGGCCAAGGAGACCAAGGTGG...TTCTATTTTCGGGAGATGTCTATTGCCGAGTAGAGTAATATATACCCAGAGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CCA 90 bp CCCTCTGCTATAGACATACTCTGGGTATATATTACTCTACTCGGCAATAGACATGGATGGAATTGCGGGTaGTCCCCACGTACAGTGTGT +
Preference number: 4 (lower is better)
Translates to: PSAIDILWVYITLLGNRHGWNCG*SPRTVC
Trigger: ACACACTGTACGTGGGGACCACCCGCAATTCCATCC...ATGTCTATTGCCGAGTAGAGTAATATATACCCAGAGTATGTCTATAGCAGAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CCA 90 bp CCCTCTGCTATAGACATACTCTGGGTATATATTACTCTACTCGGCAATAGACATCTCCACAGGGGCTGGTaGGAATCTGAGCTCCATAGA +
Preference number: 4 (lower is better)
Translates to: PSAIDILWVYITLLGNRHLHRGW*ESELHR
Trigger: TCTATGGAGCTCAGATTCCCACCAGCCCCTGTGGAG...ATGTCTATTGCCGAGTAGAGTAATATATACCCAGAGTATGTCTATAGCAGAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CCA 90 bp CTCTGGGTATATATTACTCTACTCGGCAATAGACATCTCCCGAAAATAGAATTCTACACCAAGTTGTCGTaGGAGCCCACGGCCAGGTAC +
Preference number: 4 (lower is better)
Translates to: LWVYITLLGNRHLPKIEFYTKLS*EPTARY
Trigger: GTACCTGGCCGTGGGCTCCCACGACAACTTGGTGTA...GAATTCTATTTTCGGGAGATGTCTATTGCCGAGTAGAGTAATATATACCCAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
CDS-3UTR CCA 90 bp TCTGCTATAGACATACTCTGGGTATATATTACTCTACTCGGCAATAGACATCTCTGTCCTTGCCCCCTGTaGTCAGGGCCATGCTGTCAT +
Preference number: 4 (lower is better)
Translates to: SAIDILWVYITLLGNRHLCPCPL*SGPCCH
Trigger: ATGACAGCATGGCCCTGACCACAGGGGGCAAGGACA...GAGATGTCTATTGCCGAGTAGAGTAATATATACCCAGAGTATGTCTATAGCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CCA 90 bp CTCTGGGTATATATTACTCTACTCGGCAATAGACATCTCCCGAAAATAGAATTCTGTCCTTGCCCCCTGTaGTCAGGGCCATGCTGTCAT +
Preference number: 4 (lower is better)
Translates to: LWVYITLLGNRHLPKIEFCPCPL*SGPCCH
Trigger: ATGACAGCATGGCCCTGACCACAGGGGGCAAGGACA...GAATTCTATTTTCGGGAGATGTCTATTGCCGAGTAGAGTAATATATACCCAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CCA 90 bp ATACTCTGGGTATATATTACTCTACTCGGCAATAGACATCTCCCGAAAATAGAAGCCACTGTAGCACACTaGTGTCCTTGCCCCCTGTGG +
Preference number: 4 (lower is better)
Translates to: ILWVYITLLGNRHLPKIEATVAH*CPCPLW
Trigger: CCACAGGGGGCAAGGACACCAGTGTGCTACAGTGGC...TTCTATTTTCGGGAGATGTCTATTGCCGAGTAGAGTAATATATACCCAGAGTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CCA 90 bp ATACTCTGGGTATATATTACTCTACTCGGCAATAGACATCTCCCGAAAATAGAAAGGTCGCCTCCTTCTTaGGAGAGGATGGGGACGTGG +
Preference number: 4 (lower is better)
Translates to: ILWVYITLLGNRHLPKIERSPPS*ERMGTW
Trigger: CCACGTCCCCATCCTCTCCCAAGAAGGAGGCGACCT...TTCTATTTTCGGGAGATGTCTATTGCCGAGTAGAGTAATATATACCCAGAGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536630.5
ENST00000587152.6
CDS-3UTR TCA 90 bp CCCTCTGCTATAGACATACTCTGGGTATATATTACTCTACTCGGCAATAGACATGGAGAAGCTGACCACTaGGATCTGTTCATTGCCGTC +
Preference number: 4 (lower is better)
Translates to: PSAIDILWVYITLLGNRHGEADH*DLFIAV
Trigger: GACGGCAATGAACAGATCTCAGTGGTCAGCTTCTCC...ATGTCTATTGCCGAGTAGAGTAATATATACCCAGAGTATGTCTATAGCAGAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR TCA 90 bp ATACTCTGGGTATATATTACTCTACTCGGCAATAGACATCTCCCGAAAATAGAAAGCAACTTCCCATCATaGGAGCGGGCCACAGCGTTG +
Preference number: 4 (lower is better)
Translates to: ILWVYITLLGNRHLPKIESNFPS*ERATAL
Trigger: CAACGCTGTGGCCCGCTCTCATGATGGGAAGTTGCT...TTCTATTTTCGGGAGATGTCTATTGCCGAGTAGAGTAATATATACCCAGAGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR GCA 90 bp CCCTCTGCTATAGACATACTCTGGGTATATATTACTCTACTCGGCAATAGACATCCACTTCCTGCAGCTTaGTGTAGTCAGAACCCCAGA +
Preference number: 4 (lower is better)
Translates to: PSAIDILWVYITLLGNRHPLPAA*CSQNPR
Trigger: TCTGGGGTTCTGACTACAGCAAGCTGCAGGAAGTGG...ATGTCTATTGCCGAGTAGAGTAATATATACCCAGAGTATGTCTATAGCAGAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR GCA 90 bp ATAGACATACTCTGGGTATATATTACTCTACTCGGCAATAGACATCTCCCGAAATGCACCAGCTTATCCTaGCCGCAGGTCACAAACTGG +
Preference number: 4 (lower is better)
Translates to: IDILWVYITLLGNRHLPKCTSLS*PQVTNW
Trigger: CCAGTTTGTGACCTGCGGGCAGGATAAGCTGGTGCA...TTTCGGGAGATGTCTATTGCCGAGTAGAGTAATATATACCCAGAGTATGTCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR GCA 90 bp ATACTCTGGGTATATATTACTCTACTCGGCAATAGACATCTCCCGAAAATAGAATCCGCACTGGTGATCTaGTTACAGGTAGCCGGGTCC +
Preference number: 4 (lower is better)
Translates to: ILWVYITLLGNRHLPKIESALVI*LQVAGS
Trigger: GGACCCGGCTACCTGTAAGCAGATCACCAGTGCGGA...TTCTATTTTCGGGAGATGTCTATTGCCGAGTAGAGTAATATATACCCAGAGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR GCA 90 bp AAAGGTCACACACAGCACATACTTCGGTTTCTCATGTTTCTCAAAGAGGCCTTGAGTGAGCCAAGATTATaGCATTGCACTCCAGCCTTG +
Preference number: 4 (lower is better)
Translates to: KGHTQHILRFLMFLKEALSEPRL*HCTPAL
Trigger: CAAGGCTGGAGTGCAATGGCATAATCTTGGCTCACT...CAAGGCCTCTTTGAGAAACATGAGAAACCGAAGTATGTGCTGTGTGTGACCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592853.5
CDS-3UTR CCA 90 bp ACCCCCTCTGCTATAGACATACTCTGGGTATATATTACTCTACTCGGCAATAGAACACTATCTCCCCGGTaGGCAGCAAATAAAGGTTGG +
Preference number: 4 (lower is better)
Translates to: TPSAIDILWVYITLLGNRTLSPR*AANKGW
Trigger: CCAACCTTTATTTGCTGCCCACCGGGGAGATAGTGT...TCTATTGCCGAGTAGAGTAATATATACCCAGAGTATGTCTATAGCAGAGGGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CCA 90 bp TCCCGCCCCCATAACCCCCTCTGCTATAGACATACTCTGGGTATATATTACTCTAGAGCATGTGATCATTaGATTCATCCACTGCACACA +
Preference number: 4 (lower is better)
Translates to: SRPHNPLCYRHTLGIYYSRACDH*IHPLHT
Trigger: TGTGTGCAGTGGATGAATCCAATGATCACATGCTCT...AGAGTAATATATACCCAGAGTATGTCTATAGCAGAGGGGGTTATGGGGGCGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CCA 90 bp ATAGACATACTCTGGGTATATATTACTCTACTCGGCAATAGACATCTCCCGAAAGGATGGAATTGCGGGTaGTCCCCACGTACAGTGTGT +
Preference number: 4 (lower is better)
Translates to: IDILWVYITLLGNRHLPKGWNCG*SPRTVC
Trigger: ACACACTGTACGTGGGGACCACCCGCAATTCCATCC...TTTCGGGAGATGTCTATTGCCGAGTAGAGTAATATATACCCAGAGTATGTCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CCA 90 bp TCTGCTATAGACATACTCTGGGTATATATTACTCTACTCGGCAATAGACATCTCTCTTCCACATGGCCCTaGACCAGCAGTGAGAAGCCT +
Preference number: 4 (lower is better)
Translates to: SAIDILWVYITLLGNRHLSSTWP*TSSEKP
Trigger: AGGCTTCTCACTGCTGGTCCAGGGCCATGTGGAAGA...GAGATGTCTATTGCCGAGTAGAGTAATATATACCCAGAGTATGTCTATAGCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CCA 90 bp CTCTGGGTATATATTACTCTACTCGGCAATAGACATCTCCCGAAAATAGAATTCCTCCACAGGGGCTGGTaGGAATCTGAGCTCCATAGA +
Preference number: 4 (lower is better)
Translates to: LWVYITLLGNRHLPKIEFLHRGW*ESELHR
Trigger: TCTATGGAGCTCAGATTCCCACCAGCCCCTGTGGAG...GAATTCTATTTTCGGGAGATGTCTATTGCCGAGTAGAGTAATATATACCCAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CCA 90 bp ATACTCTGGGTATATATTACTCTACTCGGCAATAGACATCTCCCGAAAATAGAACTGCTCCACAGGGGCTaGTGGGAATCTGAGCTCCAT +
Preference number: 4 (lower is better)
Translates to: ILWVYITLLGNRHLPKIELLHRG*WESELH
Trigger: ATGGAGCTCAGATTCCCACCAGCCCCTGTGGAGCAG...TTCTATTTTCGGGAGATGTCTATTGCCGAGTAGAGTAATATATACCCAGAGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CCA 90 bp CCCTCTGCTATAGACATACTCTGGGTATATATTACTCTACTCGGCAATAGACATGCCACATTTGTCACATaGCTGCTGTGTCCACCGTAC +
Preference number: 4 (lower is better)
Translates to: PSAIDILWVYITLLGNRHATFVT*LLCPPY
Trigger: GTACGGTGGACACAGCAGCCATGTGACAAATGTGGC...ATGTCTATTGCCGAGTAGAGTAATATATACCCAGAGTATGTCTATAGCAGAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CCA 90 bp ATACTCTGGGTATATATTACTCTACTCGGCAATAGACATCTCCCGAAAATAGAATGTCCTTGCCCCCTGTaGTCAGGGCCATGCTGTCAT +
Preference number: 4 (lower is better)
Translates to: ILWVYITLLGNRHLPKIECPCPL*SGPCCH
Trigger: ATGACAGCATGGCCCTGACCACAGGGGGCAAGGACA...TTCTATTTTCGGGAGATGTCTATTGCCGAGTAGAGTAATATATACCCAGAGTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR TCA 90 bp TCTGCTATAGACATACTCTGGGTATATATTACTCTACTCGGCAATAGACATCTCCCTCATTGGAGCACTTaGCATCCACCACCTTGGTCT +
Preference number: 4 (lower is better)
Translates to: SAIDILWVYITLLGNRHLPHWST*HPPPWS
Trigger: AGACCAAGGTGGTGGATGTCAAGTGCTCCAATGAGG...GAGATGTCTATTGCCGAGTAGAGTAATATATACCCAGAGTATGTCTATAGCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR TCA 90 bp CTCTGGGTATATATTACTCTACTCGGCAATAGACATCTCCCGAAAATAGAATTCGGAGAAGCTGACCACTaGGATCTGTTCATTGCCGTC +
Preference number: 4 (lower is better)
Translates to: LWVYITLLGNRHLPKIEFGEADH*DLFIAV
Trigger: GACGGCAATGAACAGATCTCAGTGGTCAGCTTCTCC...GAATTCTATTTTCGGGAGATGTCTATTGCCGAGTAGAGTAATATATACCCAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR GCA 90 bp CCCTCTGCTATAGACATACTCTGGGTATATATTACTCTACTCGGCAATAGACATTACGGTTCCCACCTTTaGCCCAAACATAGAGGTTCC +
Preference number: 4 (lower is better)
Translates to: PSAIDILWVYITLLGNRHYGSHL*PKHRGS
Trigger: GGAACCTCTATGTTTGGGGCAAAGGTGGGAACCGTA...ATGTCTATTGCCGAGTAGAGTAATATATACCCAGAGTATGTCTATAGCAGAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR GCA 90 bp ATAGACATACTCTGGGTATATATTACTCTACTCGGCAATAGACATCTCCCGAAACCACTTCCTGCAGCTTaGTGTAGTCAGAACCCCAGA +
Preference number: 4 (lower is better)
Translates to: IDILWVYITLLGNRHLPKPLPAA*CSQNPR
Trigger: TCTGGGGTTCTGACTACAGCAAGCTGCAGGAAGTGG...TTTCGGGAGATGTCTATTGCCGAGTAGAGTAATATATACCCAGAGTATGTCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR GCA 90 bp CTCTGGGTATATATTACTCTACTCGGCAATAGACATCTCCCGAAAATAGAATTCTTTTGGCGCTACAGTTaGTGCTGGAGGATGTGGTCC +
Preference number: 4 (lower is better)
Translates to: LWVYITLLGNRHLPKIEFFWRYS*CWRMWS
Trigger: GGACCACATCCTCCAGCAGCAACTGTAGCGCCAAAA...GAATTCTATTTTCGGGAGATGTCTATTGCCGAGTAGAGTAATATATACCCAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536630.5
ENST00000587152.6
CDS-3UTR CCA 90 bp ATACTCTGGGTATATATTACTCTACTCGGCAATAGACATCTCCCGAAAATAGAACCAGCACGTGTAAGGTaGAGAGGGAAACTGAGTCCC +
Preference number: 4 (lower is better)
Translates to: ILWVYITLLGNRHLPKIEPARVR*RGKLSP
Trigger: GGGACTCAGTTTCCCTCTCCACCTTACACGTGCTGG...TTCTATTTTCGGGAGATGTCTATTGCCGAGTAGAGTAATATATACCCAGAGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CCA 90 bp GCCCCCATAACCCCCTCTGCTATAGACATACTCTGGGTATATATTACTCTACTCAGAGCATGTGATCATTaGATTCATCCACTGCACACA +
Preference number: 4 (lower is better)
Translates to: APITPSAIDILWVYITLLRACDH*IHPLHT
Trigger: TGTGTGCAGTGGATGAATCCAATGATCACATGCTCT...GAGTAGAGTAATATATACCCAGAGTATGTCTATAGCAGAGGGGGTTATGGGGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CCA 90 bp ATACTCTGGGTATATATTACTCTACTCGGCAATAGACATCTCCCGAAAATAGAACTCCACAGGGGCTGGTaGGAATCTGAGCTCCATAGA +
Preference number: 4 (lower is better)
Translates to: ILWVYITLLGNRHLPKIELHRGW*ESELHR
Trigger: TCTATGGAGCTCAGATTCCCACCAGCCCCTGTGGAG...TTCTATTTTCGGGAGATGTCTATTGCCGAGTAGAGTAATATATACCCAGAGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CCA 90 bp ATAGACATACTCTGGGTATATATTACTCTACTCGGCAATAGACATCTCCCGAAATCATTGCCGTCTGTGTaGATAGCCACCAGGTCATGG +
Preference number: 4 (lower is better)
Translates to: IDILWVYITLLGNRHLPKSLPSV*IATRSW
Trigger: CCATGACCTGGTGGCTATCCACACAGACGGCAATGA...TTTCGGGAGATGTCTATTGCCGAGTAGAGTAATATATACCCAGAGTATGTCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR TCA 90 bp ATACTCTGGGTATATATTACTCTACTCGGCAATAGACATCTCCCGAAAATAGAACCTCATTGGAGCACTTaGCATCCACCACCTTGGTCT +
Preference number: 4 (lower is better)
Translates to: ILWVYITLLGNRHLPKIEPHWST*HPPPWS
Trigger: AGACCAAGGTGGTGGATGTCAAGTGCTCCAATGAGG...TTCTATTTTCGGGAGATGTCTATTGCCGAGTAGAGTAATATATACCCAGAGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR TCA 90 bp ATACTCTGGGTATATATTACTCTACTCGGCAATAGACATCTCCCGAAAATAGAAATAGAATTCCTGCCCTaGCACCTGACTCTTCCCTGG +
Preference number: 4 (lower is better)
Translates to: ILWVYITLLGNRHLPKIEIEFLP*HLTLPW
Trigger: CCAGGGAAGAGTCAGGTGTCAGGGCAGGAATTCTAT...TTCTATTTTCGGGAGATGTCTATTGCCGAGTAGAGTAATATATACCCAGAGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR GCA 90 bp ATAGACATACTCTGGGTATATATTACTCTACTCGGCAATAGACATCTCCCGAAATACGGTTCCCACCTTTaGCCCAAACATAGAGGTTCC +
Preference number: 4 (lower is better)
Translates to: IDILWVYITLLGNRHLPKYGSHL*PKHRGS
Trigger: GGAACCTCTATGTTTGGGGCAAAGGTGGGAACCGTA...TTTCGGGAGATGTCTATTGCCGAGTAGAGTAATATATACCCAGAGTATGTCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR GCA 90 bp TCTGCTATAGACATACTCTGGGTATATATTACTCTACTCGGCAATAGACATCTCTACGGTTCCCACCTTTaGCCCAAACATAGAGGTTCC +
Preference number: 4 (lower is better)
Translates to: SAIDILWVYITLLGNRHLYGSHL*PKHRGS
Trigger: GGAACCTCTATGTTTGGGGCAAAGGTGGGAACCGTA...GAGATGTCTATTGCCGAGTAGAGTAATATATACCCAGAGTATGTCTATAGCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR GCA 90 bp ATACTCTGGGTATATATTACTCTACTCGGCAATAGACATCTCCCGAAAATAGAATCTGAGCTCCATAGATaGACCAGCTTATCCTGCCCG +
Preference number: 4 (lower is better)
Translates to: ILWVYITLLGNRHLPKIESELHR*TSLSCP
Trigger: CGGGCAGGATAAGCTGGTGCATCTATGGAGCTCAGA...TTCTATTTTCGGGAGATGTCTATTGCCGAGTAGAGTAATATATACCCAGAGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR GCA 90 bp ATAGACATACTCTGGGTATATATTACTCTACTCGGCAATAGACATCTCCCGAAACCCCATAACCCCCTCTaGTATAGACATACTCTGGGT +
Preference number: 4 (lower is better)
Translates to: IDILWVYITLLGNRHLPKPHNPL*YRHTLG
Trigger: ACCCAGAGTATGTCTATAGCAGAGGGGGTTATGGGG...TTTCGGGAGATGTCTATTGCCGAGTAGAGTAATATATACCCAGAGTATGTCTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR GCA 90 bp ATACTCTGGGTATATATTACTCTACTCGGCAATAGACATCTCCCGAAAATAGAATTTTGGCGCTACAGTTaGTGCTGGAGGATGTGGTCC +
Preference number: 4 (lower is better)
Translates to: ILWVYITLLGNRHLPKIEFWRYS*CWRMWS
Trigger: GGACCACATCCTCCAGCAGCAACTGTAGCGCCAAAA...TTCTATTTTCGGGAGATGTCTATTGCCGAGTAGAGTAATATATACCCAGAGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536630.5
ENST00000587152.6
CDS-3UTR GCA 90 bp ATAGACATACTCTGGGTATATATTACTCTACTCGGCAATAGACATCTCCCGAAACTTCCATACCGCTCGTaGCCGACAAATTGTCATCGT +
Preference number: 4 (lower is better)
Translates to: IDILWVYITLLGNRHLPKLPYRS*PTNCHR
Trigger: ACGATGACAATTTGTCGGGCACGAGCGGTATGGAAG...TTTCGGGAGATGTCTATTGCCGAGTAGAGTAATATATACCCAGAGTATGTCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587152.6
CDS-3UTR CCA 90 bp TCTGCTATAGACATACTCTGGGTATATATTACTCTACTCGGCAATAGACATCTCACACTATCTCCCCGGTaGGCAGCAAATAAAGGTTGG +
Preference number: 4 (lower is better)
Translates to: SAIDILWVYITLLGNRHLTLSPR*AANKGW
Trigger: CCAACCTTTATTTGCTGCCCACCGGGGAGATAGTGT...GAGATGTCTATTGCCGAGTAGAGTAATATATACCCAGAGTATGTCTATAGCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CCA 90 bp TCTGCTATAGACATACTCTGGGTATATATTACTCTACTCGGCAATAGACATCTCTGGGCCCAATCCAGGTaGGTGATAAAACTGGAATGG +
Preference number: 4 (lower is better)
Translates to: SAIDILWVYITLLGNRHLWAQSR*VIKLEW
Trigger: CCATTCCAGTTTTATCACCCACCTGGATTGGGCCCA...GAGATGTCTATTGCCGAGTAGAGTAATATATACCCAGAGTATGTCTATAGCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CCA 90 bp ATACTCTGGGTATATATTACTCTACTCGGCAATAGACATCTCCCGAAAATAGAAGCCACATTTGTCACATaGCTGCTGTGTCCACCGTAC +
Preference number: 4 (lower is better)
Translates to: ILWVYITLLGNRHLPKIEATFVT*LLCPPY
Trigger: GTACGGTGGACACAGCAGCCATGTGACAAATGTGGC...TTCTATTTTCGGGAGATGTCTATTGCCGAGTAGAGTAATATATACCCAGAGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CCA 90 bp CCCTCTGCTATAGACATACTCTGGGTATATATTACTCTACTCGGCAATAGACATTTTTGCCTTCCTTTTTaGCGCTACAGTTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: PSAIDILWVYITLLGNRHFCLPF*RYSCCW
Trigger: CCAGCAGCAACTGTAGCGCCAAAAAGGAAGGCAAAA...ATGTCTATTGCCGAGTAGAGTAATATATACCCAGAGTATGTCTATAGCAGAGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000536630.5
ENST00000587152.6
CDS-3UTR GCA 90 bp CTCTGGGTATATATTACTCTACTCGGCAATAGACATCTCCCGAAAATAGAATTCCATTTGTCACATGGCTaGTGTGTCCACCGTACTTGT +
Preference number: 4 (lower is better)
Translates to: LWVYITLLGNRHLPKIEFHLSHG*CVHRTC
Trigger: ACAAGTACGGTGGACACAGCAGCCATGTGACAAATG...GAATTCTATTTTCGGGAGATGTCTATTGCCGAGTAGAGTAATATATACCCAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CCA 90 bp ATACTCTGGGTATATATTACTCTACTCGGCAATAGACATCTCCCGAAAATAGAAACACTATCTCCCCGGTaGGCAGCAAATAAAGGTTGG +
Preference number: 4 (lower is better)
Translates to: ILWVYITLLGNRHLPKIETLSPR*AANKGW
Trigger: CCAACCTTTATTTGCTGCCCACCGGGGAGATAGTGT...TTCTATTTTCGGGAGATGTCTATTGCCGAGTAGAGTAATATATACCCAGAGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CCA 90 bp TCTGCTATAGACATACTCTGGGTATATATTACTCTACTCGGCAATAGACATCTCGTGACCATATCTGGGTaGATGGCCAAGCATTTGATG +
Preference number: 4 (lower is better)
Translates to: SAIDILWVYITLLGNRHLVTISG*MAKHLM
Trigger: CATCAAATGCTTGGCCATCCACCCAGATATGGTCAC...GAGATGTCTATTGCCGAGTAGAGTAATATATACCCAGAGTATGTCTATAGCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CCA 90 bp CTCTGGGTATATATTACTCTACTCGGCAATAGACATCTCCCGAAAATAGAATTCGATGGTGACCATATCTaGGTGGATGGCCAAGCATTT +
Preference number: 4 (lower is better)
Translates to: LWVYITLLGNRHLPKIEFDGDHI*VDGQAF
Trigger: AAATGCTTGGCCATCCACCCAGATATGGTCACCATC...GAATTCTATTTTCGGGAGATGTCTATTGCCGAGTAGAGTAATATATACCCAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CCA 90 bp AAAAAGGTCACACACAGCACATACTTCGGTTTCTCATGTTTCTCAAAGAGGCCTAGAGCATGTGATCATTaGATTCATCCACTGCACACA +
Preference number: 4 (lower is better)
Translates to: KKVTHSTYFGFSCFSKRPRACDH*IHPLHT
Trigger: TGTGTGCAGTGGATGAATCCAATGATCACATGCTCT...AGGCCTCTTTGAGAAACATGAGAAACCGAAGTATGTGCTGTGTGTGACCTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586195.5
ENST00000592853.5
CDS-3UTR TCA 90 bp ATACTCTGGGTATATATTACTCTACTCGGCAATAGACATCTCCCGAAAATAGAACACACCGAGAGCATGTaGTCATTGGATTCATCCACT +
Preference number: 4 (lower is better)
Translates to: ILWVYITLLGNRHLPKIEHTESM*SLDSST
Trigger: AGTGGATGAATCCAATGATCACATGCTCTCGGTGTG...TTCTATTTTCGGGAGATGTCTATTGCCGAGTAGAGTAATATATACCCAGAGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CCA 90 bp ATACTCTGGGTATATATTACTCTACTCGGCAATAGACATCTCCCGAAAATAGAAAGAGCATGTGATCATTaGATTCATCCACTGCACACA +
Preference number: 4 (lower is better)
Translates to: ILWVYITLLGNRHLPKIERACDH*IHPLHT
Trigger: TGTGTGCAGTGGATGAATCCAATGATCACATGCTCT...TTCTATTTTCGGGAGATGTCTATTGCCGAGTAGAGTAATATATACCCAGAGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS GCA 90 bp CCGAGGCAGTGGTGCCTAAGCGCGGAGGCGCCCGGCCCTTGGGGGTaGCCCGCGCGCGTAGCGCCGCTCCCTGTTCTTCGCATGCCCGCA +
Preference number: 5 (lower is better)
Translates to: PRQWCLSAEAPGPWG*PARVAPLPVLRMPA
Trigger: TGCGGGCATGCGAAGAACAGGGAGCGGCGCTACGCGCGCGGGGCACCCCCAAGGGCCGGGCGCCTCCGCGCTTAGGCACCACTGCCTCGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000399594.7
ENST00000536630.5
ENST00000585386.1
ENST00000587152.6
ENST00000588172.1
ENST00000588420.1
ENST00000588889.5
ENST00000592901.1
CDS TCA 90 bp CCGGCTGCGGGGGTCCTCACGGCGCACCGAGGCGAGGCGCTCTGGTaGCAAGTAGCGGCGGACACTGCTGCGCCCGGAGGTCGCCTCCTT +
Preference number: 5 (lower is better)
Translates to: PAAGVLTAHRGEALW*QVAADTAAPGGRLL
Trigger: AAGGAGGCGACCTCCGGGCGCAGCAGTGTCCGCCGCTACTTGTCACCAGAGCGCCTCGCCTCGGTGCGCCGTGAGGACCCCCGCAGCCGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000399594.7
ENST00000536630.5
ENST00000587152.6
ENST00000588172.1
ENST00000592901.1
CDS CCA 90 bp GACACACCGAGGCAGTGGTGCCTAAGCGCGGAGGCGCCCGGCCCTTaGGGGTGCCCCGCGCGCGTAGCGCCGCTCCCTGTTCTTCGCATG +
Preference number: 5 (lower is better)
Translates to: DTPRQWCLSAEAPGP*GCPARVAPLPVLRM
Trigger: CATGCGAAGAACAGGGAGCGGCGCTACGCGCGCGGGGCACCCCCAAGGGCCGGGCGCCTCCGCGCTTAGGCACCACTGCCTCGGTGTGTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000399594.7
ENST00000536630.5
ENST00000587152.6
ENST00000588172.1
ENST00000588889.5
CDS CCA 90 bp GGATACCCGAGGCAGTGGTGCCTAAGCGCGGAGGCGCCCGGCCCTTaGGGGTGCCCCGCGCGCGTAGCGCCGCTCCCTGTTCTTCGCATG +
Preference number: 5 (lower is better)
Translates to: GYPRQWCLSAEAPGP*GCPARVAPLPVLRM
Trigger: CATGCGAAGAACAGGGAGCGGCGCTACGCGCGCGGGGCACCCCCAAGGGCCGGGCGCCTCCGCGCTTAGGCACCACTGCCTCGGGTATCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000585386.1
ENST00000588420.1
ENST00000592901.1
CDS CCA 90 bp GTCCCGGCCTTGTGCCTTACCTGCGCCCGGAGGTCGCCTCCTTCTTaGGAGAGGATGGGGACGTGGCATAGCCACCCACGCGCCGCGGGG +
Preference number: 5 (lower is better)
Translates to: VPALCLTCARRSPPS*ERMGTWHSHPRAAG
Trigger: CCCCGCGGCGCGTGGGTGGCTATGCCACGTCCCCATCCTCTCCCAAGAAGGAGGCGACCTCCGGGCGCAGGTAAGGCACAAGGCCGGGAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585386.1
ENST00000588420.1
CDS CCA 90 bp ACAAGTAGCGGCGGACACTGCTGCGCCCGGAGGTCGCCTCCTTCTTaGGAGAGGATGGGGACGTGGCATAGCCACCCACGCGCCGCGGGG +
Preference number: 5 (lower is better)
Translates to: TSSGGHCCARRSPPS*ERMGTWHSHPRAAG
Trigger: CCCCGCGGCGCGTGGGTGGCTATGCCACGTCCCCATCCTCTCCCAAGAAGGAGGCGACCTCCGGGCGCAGCAGTGTCCGCCGCTACTTGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399594.7
ENST00000536630.5
ENST00000587152.6
ENST00000588172.1
ENST00000592901.1
CDS CCA 90 bp GTGACAAGTAGCGGCGGACACTGCGCCCGGAGGTCGCCTCCTTCTTaGGAGAGGATGGGGACGTGGCATAGCCACCCACGCGCCGCGGGG +
Preference number: 5 (lower is better)
Translates to: VTSSGGHCARRSPPS*ERMGTWHSHPRAAG
Trigger: CCCCGCGGCGCGTGGGTGGCTATGCCACGTCCCCATCCTCTCCCAAGAAGGAGGCGACCTCCGGGCGCAGTGTCCGCCGCTACTTGTCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588889.5
CDS CCA 90 bp AGCGTCCCGTCCCGCAGGGCGCAGAGCCCAAACACGCCGCCGTCGTaGGCGCCCAGCACCGCCTGTGTGATACGGTTCCCACCTCAAAGA +
Preference number: 5 (lower is better)
Translates to: SVPSRRAQSPNTPPS*APSTACVIRFPPQR
Trigger: TCTTTGAGGTGGGAACCGTATCACACAGGCGGTGCTGGGCGCCCACGACGGCGGCGTGTTTGGGCTCTGCGCCCTGCGGGACGGGACGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588610.5
CDS-3UTR CAA 90 bp ATGGAATTGCGGGTGGTCCCCACGTACAGTGTGTCTCCGTGGCCCTCTGCCACGCCCAGGCGGCTGACCTaGCGGCCGCCCTGGTCCACC +
Preference number: 5 (lower is better)
Translates to: MELRVVPTYSVSPWPSATPRRLT*RPPWST
Trigger: GGTGGACCAGGGCGGCCGCAAGGTCAGCCGCCTGGG...CGTGGCAGAGGGCCACGGAGACACACTGTACGTGGGGACCACCCGCAATTCCAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586195.5
CDS TCA 90 bp CCGGCTGCGGGGGTCCTCACGGCGCACCGAGGCGAGGCGCTCTGGTaGCAAGTAGCGGCGGACACTGCTAAAAGAGAGCACACAGGTGGG +
Preference number: 5 (lower is better)
Translates to: PAAGVLTAHRGEALW*QVAADTAKREHTGG
Trigger: CCCACCTGTGTGCTCTCTTTTAGCAGTGTCCGCCGCTACTTGTCACCAGAGCGCCTCGCCTCGGTGCGCCGTGAGGACCCCCGCAGCCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000585386.1
ENST00000588420.1
CDS CCA 90 bp CAGCCTGGTGGAAGTAAAGGTGGTAGCTTAGACGGGGACAGGGCGTaGAGCTCGCCCCTGCCATCCCGCGTCCACAGGCCGCGCAGCTGG +
Preference number: 5 (lower is better)
Translates to: QPGGSKGGSLDGDRA*SSPLPSRVHRPRSW
Trigger: CCAGCTGCGCGGCCTGTGGACGCGGGATGGCAGGGGCGAGCTCCACGCCCTGTCCCCGTCTAAGCTACCACCTTTACTTCCACCAGGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536630.5
CDS GCA 90 bp CCGGCAAGAAGGCAGCTCCGAGCGTGTGTCCAGGCTGTAGGTGGGTaGCAGCTCGTCTGGGATCATCATGGGCACAGGGCGGCCCCTCAG +
Preference number: 5 (lower is better)
Translates to: PARRQLRACVQAVGG*QLVWDHHGHRAAPQ
Trigger: CTGAGGGGCCGCCCTGTGCCCATGATGATCCCAGACGAGCTGGCACCCACCTACAGCCTGGACACACGCTCGGAGCTGCCTTCTTGCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000245925.8
ENST00000399594.7
ENST00000536630.5
ENST00000586770.5
ENST00000587152.6
ENST00000588000.5
ENST00000588308.5
ENST00000588610.5
ENST00000588889.5
ENST00000589876.5
ENST00000590018.1
ENST00000590043.5
ENST00000591721.5
ENST00000593255.5
CDS GCA 90 bp CCGGCTGAGCGGGCAGGGTCCTGGACCAGCAGTGAGAAGCCTGTGTaGACGGAGCCCTGCAGGATGGAATTGCGGGTGGTCCCCACGTAC +
Preference number: 5 (lower is better)
Translates to: PAERAGSWTSSEKPV*TEPCRMELRVVPTY
Trigger: GTACGTGGGGACCACCCGCAATTCCATCCTGCAGGGCTCCGTGCACACAGGCTTCTCACTGCTGGTCCAGGACCCTGCCCGCTCAGCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590575.5
CDS GCA 90 bp ACGAGGTCTTGGAAGAGGCTGGGGGTCCCGGCCTTGTGCCTTACCTaGGCCCGGAGGTCGCCTCCTTCTTGGGAGAGGATGGGGACGTGG +
Preference number: 5 (lower is better)
Translates to: TRSWKRLGVPALCLT*ARRSPPSWERMGTW
Trigger: CCACGTCCCCATCCTCTCCCAAGAAGGAGGCGACCTCCGGGCGCAGGTAAGGCACAAGGCCGGGACCCCCAGCCTCTTCCAAGACCTCGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000585386.1
ENST00000588420.1
CDS-3UTR CAA 90 bp AACACGCCGCCGTCGTGGGCGCCCAGCACCGCCTGTGTGATACGGTTCCCACCTCCCTGCAGGATGGAATaGCGGGTGGTCCCCACGTAC +
Preference number: 5 (lower is better)
Translates to: NTPPSWAPSTACVIRFPPPCRME*RVVPTY
Trigger: GTACGTGGGGACCACCCGCAATTCCATCCTGCAGGG...AGGTGGGAACCGTATCACACAGGCGGTGCTGGGCGCCCACGACGGCGGCGTGTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586195.5
CDS GCA 90 bp GCCGCCTTTAGGACCGCCAGCTCGTCTTCCTGTAACTGCAGCCGCTaGTCCAGCGCCGACACGCGGTCGTCCACTTCCATACCGCTCGTG +
Preference number: 5 (lower is better)
Translates to: AAFRTASSSSCNCSR*SSADTRSSTSIPLV
Trigger: CACGAGCGGTATGGAAGTGGACGACCGCGTGTCGGCGCTGGAGCAGCGGCTGCAGTTACAGGAAGACGAGCTGGCGGTCCTAAAGGCGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399594.7
ENST00000536630.5
ENST00000585386.1
ENST00000587152.6
ENST00000588172.1
ENST00000588420.1
ENST00000588889.5
ENST00000592901.1
CDS GCA 90 bp TCCGCCAGCGCCGCCTTTAGGACCGCCAGCTCGTCTTCCTGTAACTaGAGCCGCTGCTCCAGCGCCGACACGCGGTCGTCCACTTCCATA +
Preference number: 5 (lower is better)
Translates to: SASAAFRTASSSSCN*SRCSSADTRSSTSI
Trigger: TATGGAAGTGGACGACCGCGTGTCGGCGCTGGAGCAGCGGCTGCAGTTACAGGAAGACGAGCTGGCGGTCCTAAAGGCGGCGCTGGCGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399594.7
ENST00000536630.5
ENST00000585386.1
ENST00000587152.6
ENST00000588172.1
ENST00000588420.1
ENST00000588889.5
ENST00000592901.1
CDS GCA 90 bp CTGTCTCCCACGAGGTCTTGGAAGAGGCTGGGGGTCCCGGCCTTGTaGCTTACCTGCGCCCGGAGGTCGCCTCCTTCTTGGGAGAGGATG +
Preference number: 5 (lower is better)
Translates to: LSPTRSWKRLGVPAL*LTCARRSPPSWERM
Trigger: CATCCTCTCCCAAGAAGGAGGCGACCTCCGGGCGCAGGTAAGGCACAAGGCCGGGACCCCCAGCCTCTTCCAAGACCTCGTGGGAGACAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000585386.1
ENST00000588420.1
CDS GCA 90 bp GGAATTGCGGGTGGTCCCCACGTACAGTGTGTCTCCGTGGCCCTCTaGCACGGTGCGCACAGGGCCAAAGTCCTCAGGGACCTTTGCCCC +
Preference number: 5 (lower is better)
Translates to: GIAGGPHVQCVSVAL*HGAHRAKVLRDLCP
Trigger: GGGGCAAAGGTCCCTGAGGACTTTGGCCCTGTGCGCACCGTGGCAGAGGGCCACGGAGACACACTGTACGTGGGGACCACCCGCAATTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590819.5
CDS GCA 90 bp CATACCGCTCGTGCCCGACAAATTGTCATCTGGAAGACGGGGGAGTaGCGGCTGCAGGGCCACCCAGGAGCTCCAGTGCCCAAGGGGTCC +
Preference number: 5 (lower is better)
Translates to: HTARARQIVIWKTGE*RLQGHPGAPVPKGS
Trigger: GGACCCCTTGGGCACTGGAGCTCCTGGGTGGCCCTGCAGCCGGCACTCCCCCGTCTTCCAGATGACAATTTGTCGGGCACGAGCGGTATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588420.1
CDS-3UTR CAA 90 bp TTCCCTGGCCGCATCAGACCACCCGCCACTGTAGCACACTGGTGTCCTTGCCCCGAGCGGGCCACAGCGTaGATATCAGTGCCGTCCGCC +
Preference number: 5 (lower is better)
Translates to: FPGRIRPPATVAHWCPCPERATA*ISVPSA
Trigger: GGCGGACGGCACTGATATCAACGCTGTGGCCCGCTC...GGGGCAAGGACACCAGTGTGCTACAGTGGCGGGTGGTCTGATGCGGCCAGGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586195.5
ENST00000588308.5
CDS-3UTR CAA 90 bp TGGAATTGCGGGTGGTCCCCACGTACAGTGTGTCTCCGTGGCCCTCTGCCACGGAGCACACTGGTGTCCTaGCCCCCTGTGGTCAGGGCC +
Preference number: 5 (lower is better)
Translates to: WNCGWSPRTVCLRGPLPRSTLVS*PPVVRA
Trigger: GGCCCTGACCACAGGGGGCAAGGACACCAGTGTGCT...CCGTGGCAGAGGGCCACGGAGACACACTGTACGTGGGGACCACCCGCAATTCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586195.5
CDS TCA 90 bp TCCAAGACTGGCCACGAGGGGTCGAAAGAGCACCCGGATGCCCGATaGAAGGGCCGCTTCCGCAGCGCTGGGCCACTTTCCCAGAACTCG +
Preference number: 5 (lower is better)
Translates to: SKTGHEGSKEHPDAR*KGRFRSAGPLSQNS
Trigger: CGAGTTCTGGGAAAGTGGCCCAGCGCTGCGGAAGCGGCCCTTTCATCGGGCATCCGGGTGCTCTTTCGACCCCTCGTGGCCAGTCTTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589876.5
CDS GCA 90 bp GCTGCTCCAGCGCCGACACGCGGTCGTCCACTTCCATACCGCTCGTaGCCGACAAATTGTCATCTGGAAGACGGGGGAGTGCCGGCTGCA +
Preference number: 5 (lower is better)
Translates to: AAPAPTRGRPLPYRS*PTNCHLEDGGVPAA
Trigger: TGCAGCCGGCACTCCCCCGTCTTCCAGATGACAATTTGTCGGGCACGAGCGGTATGGAAGTGGACGACCGCGTGTCGGCGCTGGAGCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000588420.1
ENST00000588889.5
CDS GCA 90 bp ATGCAGGTCCAAGACTGGCCACGAGGGGTCGAAAGAGCACCCGGATaGCCGATGAAAGGGCCGCTTCCGCAGCGCTGGGCCACTTTCCCA +
Preference number: 5 (lower is better)
Translates to: MQVQDWPRGVERAPG*PMKGPLPQRWATFP
Trigger: TGGGAAAGTGGCCCAGCGCTGCGGAAGCGGCCCTTTCATCGGGCATCCGGGTGCTCTTTCGACCCCTCGTGGCCAGTCTTGGACCTGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589876.5
CDS CCA 90 bp AGGCAAACAAACCACCTCTGTCTCCCACGAGGTCTTGGAAGAGGCTaGGGGTCCCGGCCTTGTGCCTTACCTGCGCCCGGAGGTCGCCTC +
Preference number: 5 (lower is better)
Translates to: RQTNHLCLPRGLGRG*GSRPCALPAPGGRL
Trigger: GAGGCGACCTCCGGGCGCAGGTAAGGCACAAGGCCGGGACCCCCAGCCTCTTCCAAGACCTCGTGGGAGACAGAGGTGGTTTGTTTGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585386.1
ENST00000588420.1
CDS CCA 90 bp GCTGGAGCTCAGGCAAACAAACCACCTCTGTCTCCCACGAGGTCTTaGAAGAGGCTGGGGGTCCCGGCCTTGTGCCTTACCTGCGCCCGG +
Preference number: 5 (lower is better)
Translates to: AGAQANKPPLSPTRS*KRLGVPALCLTCAR
Trigger: CCGGGCGCAGGTAAGGCACAAGGCCGGGACCCCCAGCCTCTTCCAAGACCTCGTGGGAGACAGAGGTGGTTTGTTTGCCTGAGCTCCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000585386.1
ENST00000588420.1
CDS CCA 90 bp GCGGTCGTCCACTTCCATACCGCTCGTGCCCGACAAATTGTCATCTaGAAGACGGGGGAGTGCCGGCTGCAGGGCCACCCAGGAGCTCCA +
Preference number: 5 (lower is better)
Translates to: AVVHFHTARARQIVI*KTGECRLQGHPGAP
Trigger: TGGAGCTCCTGGGTGGCCCTGCAGCCGGCACTCCCCCGTCTTCCAGATGACAATTTGTCGGGCACGAGCGGTATGGAAGTGGACGACCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000588420.1
CDS-3UTR CAA 90 bp TACACGTACACCAAGTTGTCGTGGGAGCCCACGGCCAGGTACGCCCCGTCTGGGCCCTGCAGGATGGAATaGCGGGTGGTCCCCACGTAC +
Preference number: 5 (lower is better)
Translates to: YTYTKLSWEPTARYAPSGPCRME*RVVPTY
Trigger: GTACGTGGGGACCACCCGCAATTCCATCCTGCAGGG...CCCAGACGGGGCGTACCTGGCCGTGGGCTCCCACGACAACTTGGTGTACGTGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399594.7
ENST00000586195.5
ENST00000590819.5
CDS-3UTR CAA 90 bp GTACACGTACACCAAGTTGTCGTGGGAGCCCACGGCCAGGTACGCCCCGTCTGGCCCTGCAGGATGGAATaGCGGGTGGTCCCCACGTAC +
Preference number: 5 (lower is better)
Translates to: VHVHQVVVGAHGQVRPVWPCRME*RVVPTY
Trigger: GTACGTGGGGACCACCCGCAATTCCATCCTGCAGGG...CCAGACGGGGCGTACCTGGCCGTGGGCTCCCACGACAACTTGGTGTACGTGTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399594.7
ENST00000586195.5
ENST00000590819.5
CDS-3UTR CAA 90 bp ATGTCAGTCTACCCTCCCGCCCCCATAACCCCCTCTGCTATAGACATACTCTGGCCCAGGCGGCTGACCTaGCGGCCGCCCTGGTCCACC +
Preference number: 5 (lower is better)
Translates to: MSVYPPAPITPSAIDILWPRRLT*RPPWST
Trigger: GGTGGACCAGGGCGGCCGCAAGGTCAGCCGCCTGGG...CCAGAGTATGTCTATAGCAGAGGGGGTTATGGGGGCGGGAGGGTAGACTGACAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
CDS GCA 90 bp TGCAGAGGAGAGAGGCGCACCTGGACCAGCAGTGAGAAGCCTGTGTaGACGGAGCCCTGCAGGATGGAATTGCGGGTGGTCCCCACGTAC +
Preference number: 5 (lower is better)
Translates to: CRGERRTWTSSEKPV*TEPCRMELRVVPTY
Trigger: GTACGTGGGGACCACCCGCAATTCCATCCTGCAGGGCTCCGTGCACACAGGCTTCTCACTGCTGGTCCAGGTGCGCCTCTCTCCTCTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000588000.5
ENST00000588610.5
CDS GCA 90 bp GGAATTGCGGGTGGTCCCCACGTACAGTGTGTCTCCGTGGCCCTCTaGCACGGTGCGCACAGGGCCAAAGTCCTCAGGGACCTTGACATC +
Preference number: 5 (lower is better)
Translates to: GIAGGPHVQCVSVAL*HGAHRAKVLRDLDI
Trigger: GATGTCAAGGTCCCTGAGGACTTTGGCCCTGTGCGCACCGTGGCAGAGGGCCACGGAGACACACTGTACGTGGGGACCACCCGCAATTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588272.1
CDS GCA 90 bp GAGAGGGAAACTGAGTCCCAGATGCGCACGTGGGGCGGCAGCGGCTaGAGGGAAGAGAGGCTTGTTACCTTGGGGGTGCCAGCTGCTTGT +
Preference number: 5 (lower is better)
Translates to: ERETESQMRTWGGSG*REERLVTLGVPAAC
Trigger: ACAAGCAGCTGGCACCCCCAAGGTAACAAGCCTCTCTTCCCTGCAGCCGCTGCCGCCCCACGTGCGCATCTGGGACTCAGTTTCCCTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587804.1
CDS CCA 90 bp AGCACACGGCTCTGTCAAACACCCCCAAGCCCAGCACGTGTAAGGTaGAGAGGGAAACTGAGTCCCAGATGCGCACGTGGGGCGGCAGCG +
Preference number: 5 (lower is better)
Translates to: STRLCQTPPSPARVR*RGKLSPRCARGAAA
Trigger: CGCTGCCGCCCCACGTGCGCATCTGGGACTCAGTTTCCCTCTCCACCTTACACGTGCTGGGCTTGGGGGTGTTTGACAGAGCCGTGTGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 15 transcripts:
ENST00000245925.8
ENST00000399594.7
ENST00000536630.5
ENST00000586195.5
ENST00000586770.5
ENST00000587152.6
ENST00000587804.1
ENST00000588000.5
ENST00000588308.5
ENST00000588496.5
ENST00000588610.5
ENST00000588889.5
ENST00000589876.5
ENST00000591721.5
ENST00000592853.5
CDS-3UTR CAA 90 bp AGCCACTGGGGTGGAAGCCGGCTGAGCGGGCAGGGTCCTGTAATCCCAGCTACTTACACGTACACCAAGTaGTCGTGGGAGCCCACGGCC +
Preference number: 5 (lower is better)
Translates to: SHWGGSRLSGQGPVIPATYTYTK*SWEPTA
Trigger: GGCCGTGGGCTCCCACGACAACTTGGTGTACGTGTA...AGTAGCTGGGATTACAGGACCCTGCCCGCTCAGCCGGCTTCCACCCCAGTGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399594.7
CDS-3UTR CAA 90 bp CACGTACAGTGTGTCTCCGTGGCCCTCTGCCACGGTGCGCACAGGGCCAAAGTCTACACGTACACCAAGTaGTCGTGGGAGCCCACGGCC +
Preference number: 5 (lower is better)
Translates to: HVQCVSVALCHGAHRAKVYTYTK*SWEPTA
Trigger: GGCCGTGGGCTCCCACGACAACTTGGTGTACGTGTA...GACTTTGGCCCTGTGCGCACCGTGGCAGAGGGCCACGGAGACACACTGTACGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586195.5
ENST00000590819.5
CDS-3UTR CAA 90 bp GCCAGGTACGCCCCGTCTGGGGAGAAGCTGACCACTGAGATCTGTTCATTGCCGGCCGAGATCGTGCCATaGCCCTCCAGCCTGGGTGAC +
Preference number: 5 (lower is better)
Translates to: ARYAPSGEKLTTEICSLPAEIVP*PSSLGD
Trigger: GTCACCCAGGCTGGAGGGCAATGGCACGATCTCGGC...CGGCAATGAACAGATCTCAGTGGTCAGCTTCTCCCCAGACGGGGCGTACCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399594.7
CDS GCA 90 bp ACGGGGCCGAGTAAGGGGCAGAGCGCTGCCTCTCTGCAGGCCGTGTaGTTTGCTCGGTTGATCTTGCAGAGCCTAAGACACAGGCCCAGA +
Preference number: 5 (lower is better)
Translates to: TGPSKGQSAASLQAV*FARLILQSLRHRPR
Trigger: TCTGGGCCTGTGTCTTAGGCTCTGCAAGATCAACCGAGCAAAGCACACGGCCTGCAGAGAGGCAGCGCTCTGCCCCTTACTCGGCCCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586770.5
CDS GCA 90 bp ATGATGCAGGGAAGGCCAGGGAAAGAGCTGGGAAGAGGGGAGGGGTaGAGAGGAGAGAGGCGCACCTGGACCAGCAGTGAGAAGCCTGTG +
Preference number: 5 (lower is better)
Translates to: MMQGRPGKELGRGEG*RGERRTWTSSEKPV
Trigger: CACAGGCTTCTCACTGCTGGTCCAGGTGCGCCTCTCTCCTCTGCACCCCTCCCCTCTTCCCAGCTCTTTCCCTGGCCTTCCCTGCATCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588000.5
CDS GCA 90 bp CCAAGCCCAGCACGTGTAAGGTGGAGAGGGAAACTGAGTCCCAGATaGGCACGTGGGGCGGCAGCGGCTGCAGGGAAGAGAGGCTTGTTA +
Preference number: 5 (lower is better)
Translates to: PSPARVRWRGKLSPR*ARGAAAAAGKRGLL
Trigger: TAACAAGCCTCTCTTCCCTGCAGCCGCTGCCGCCCCACGTGCGCATCTGGGACTCAGTTTCCCTCTCCACCTTACACGTGCTGGGCTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587804.1
CDS CCA 90 bp CAGCTCCGAGCGTGTGTCCAGGCTGTAGGTGGGTGCCAGCTCGTCTaGGATCATCATGGGCACAGGGCGGCCCCTCAGGAACATTTTCAC +
Preference number: 5 (lower is better)
Translates to: QLRACVQAVGGCQLV*DHHGHRAAPQEHFH
Trigger: GTGAAAATGTTCCTGAGGGGCCGCCCTGTGCCCATGATGATCCCAGACGAGCTGGCACCCACCTACAGCCTGGACACACGCTCGGAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000245925.8
ENST00000399594.7
ENST00000536630.5
ENST00000586770.5
ENST00000587152.6
ENST00000588000.5
ENST00000588308.5
ENST00000588610.5
ENST00000588889.5
ENST00000589876.5
ENST00000590018.1
ENST00000590043.5
ENST00000591721.5
ENST00000593255.5
CDS CCA 90 bp AGCACGTGTAAGGTGGAGAGGGAAACTGAGTCCCAGATGCGCACGTaGGGCGGCAGCGGCTTCCCTTCCTTAGTGGTTCCCGCCACCTGT +
Preference number: 5 (lower is better)
Translates to: STCKVERETESQMRT*GGSGFPSLVVPATC
Trigger: ACAGGTGGCGGGAACCACTAAGGAAGGGAAGCCGCTGCCGCCCCACGTGCGCATCTGGGACTCAGTTTCCCTCTCCACCTTACACGTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000245925.8
ENST00000399594.7
ENST00000536630.5
ENST00000586195.5
ENST00000586770.5
ENST00000587152.6
ENST00000588000.5
ENST00000588308.5
ENST00000588496.5
ENST00000588610.5
ENST00000588889.5
ENST00000589876.5
ENST00000591721.5
ENST00000593255.5
CDS CCA 90 bp AGCACGTGTAAGGTGGAGAGGGAAACTGAGTCCCAGATGCGCACGTaGGGCGGCAGCGGCTGCAGGGAAGAGAGGCTTGTTACCTTGGGG +
Preference number: 5 (lower is better)
Translates to: STCKVERETESQMRT*GGSGCREERLVTLG
Trigger: CCCCAAGGTAACAAGCCTCTCTTCCCTGCAGCCGCTGCCGCCCCACGTGCGCATCTGGGACTCAGTTTCCCTCTCCACCTTACACGTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587804.1
CDS-3UTR CAA 90 bp GTACACGTACACCAAGTTGTCGTGGGAGCCCACGGCCAGGTACGCCCCGTCTGGTTGACATCCACCACCTaGGTCTCCTTGGCCCAGTCC +
Preference number: 5 (lower is better)
Translates to: VHVHQVVVGAHGQVRPVWLTSTT*VSLAQS
Trigger: GGACTGGGCCAAGGAGACCAAGGTGGTGGATGTCAA...CCAGACGGGGCGTACCTGGCCGTGGGCTCCCACGACAACTTGGTGTACGTGTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399594.7
ENST00000586195.5
CDS-3UTR CAA 90 bp CTGCTGTCCTGGGCCCAATCCAGGTGGGTGATAAAACTGGAATGGCCCTGGGGAGAGCGGGCCACAGCGTaGATATCAGTGCCGTCCGCC +
Preference number: 5 (lower is better)
Translates to: LLSWAQSRWVIKLEWPWGERATA*ISVPSA
Trigger: GGCGGACGGCACTGATATCAACGCTGTGGCCCGCTC...TCCCCAGGGCCATTCCAGTTTTATCACCCACCTGGATTGGGCCCAGGACAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588308.5
CDS-3UTR CAA 90 bp GCCAGGTACGCCCCGTCTGGGGAGAAGCTGACCACTGAGATCTGTTCATTGCCGCTGTGTCCACCGTACTaGTGGCTGAGGGCTCGAGGC +
Preference number: 5 (lower is better)
Translates to: ARYAPSGEKLTTEICSLPLCPPY*WLRARG
Trigger: GCCTCGAGCCCTCAGCCACAAGTACGGTGGACACAG...CGGCAATGAACAGATCTCAGTGGTCAGCTTCTCCCCAGACGGGGCGTACCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586195.5
CDS-3UTR CAA 90 bp CAAGTTGTCGTGGGAGCCCACGGCCAGGTACGCCCCGTCTGGGGAGAAGCTGACCCAGGGCCAGAGGATTaGGGAGGTATCCTAGAAGCA +
Preference number: 5 (lower is better)
Translates to: QVVVGAHGQVRPVWGEADPGPED*GGILEA
Trigger: TGCTTCTAGGATACCTCCCAAATCCTCTGGCCCTGG...GTCAGCTTCTCCCCAGACGGGGCGTACCTGGCCGTGGGCTCCCACGACAACTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399594.7
CDS-3UTR CAA 90 bp CCAGGTCATGGGTCTCCGTGTCCAGCAGCAGCCATCTGCCAGTCACTGTACCCAGAGGTCGCCTCCTTCTaGGGAGAGGATGGGGACGTG +
Preference number: 5 (lower is better)
Translates to: PGHGSPCPAAAICQSLYPEVASF*GEDGDV
Trigger: CACGTCCCCATCCTCTCCCAAGAAGGAGGCGACCTC...TGGGTACAGTGACTGGCAGATGGCTGCTGCTGGACACGGAGACCCATGACCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399594.7
CDS TCA 90 bp ACTGTGAGTGCGGGATGCAGGGAGGGGCCCAGGAAGCAAATACCCTaGCCTCTCTCCACCGACCCTGCCGATAGAATTTGCACACGGCGG +
Preference number: 5 (lower is better)
Translates to: TVSAGCREGPRKQIP*PLSTDPADRICTRR
Trigger: CCGCCGTGTGCAAATTCTATCGGCAGGGTCGGTGGAGAGAGGTCAGGGTATTTGCTTCCTGGGCCCCTCCCTGCATCCCGCACTCACAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589876.5
CDS GCA 90 bp CAGCAGGCGAGTGCCGTGAGCAAGCGAGATTCTCCCTGCACCCTCTaGTGCTGGAGCTCAGGCAAACAAACCACCTCTGTCTCCCACGAG +
Preference number: 5 (lower is better)
Translates to: QQASAVSKRDSPCTL*CWSSGKQTTSVSHE
Trigger: CTCGTGGGAGACAGAGGTGGTTTGTTTGCCTGAGCTCCAGCAGCAGAGGGTGCAGGGAGAATCTCGCTTGCTCACGGCACTCGCCTGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585386.1
ENST00000588420.1
CDS GCA 90 bp CCCCTCAATATTGACTCCGCCCTCCCAGACCTTCCACTGTTACCGTaGCACCTCAAGATTGGTCCCTCCAAGGCTCTGGCACCGTCCCCG +
Preference number: 5 (lower is better)
Translates to: PLNIDSALPDLPLLP*HLKIGPSKALAPSP
Trigger: CGGGGACGGTGCCAGAGCCTTGGAGGGACCAATCTTGAGGTGGCACGGTAACAGTGGAAGGTCTGGGAGGGCGGAGTCAATATTGAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585386.1
ENST00000588420.1
CDS GCA 90 bp AGTCTGTTACCCGTCTCCAGGGACAGCTCGAGTTCCCAGAGGAACTaGGGCTCAGAGGAGGGGAACCACAGCCACTGTGAGTGCGGGATG +
Preference number: 5 (lower is better)
Translates to: SLLPVSRDSSSSQRN*GSEEGNHSHCECGM
Trigger: CATCCCGCACTCACAGTGGCTGTGGTTCCCCTCCTCTGAGCCGCAGTTCCTCTGGGAACTCGAGCTGTCCCTGGAGACGGGTAACAGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589876.5
CDS CCA 90 bp GTGTGTCCAGGCTGTAGGTGGGTGCCAGCTCGTCTGGGATCATCATaGGCACAGGGCGGCCCCTCAGGAACATTTTCACGGAGCCATCCT +
Preference number: 5 (lower is better)
Translates to: VCPGCRWVPARLGSS*AQGGPSGTFSRSHP
Trigger: AGGATGGCTCCGTGAAAATGTTCCTGAGGGGCCGCCCTGTGCCCATGATGATCCCAGACGAGCTGGCACCCACCTACAGCCTGGACACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000245925.8
ENST00000399594.7
ENST00000536630.5
ENST00000586770.5
ENST00000587152.6
ENST00000588000.5
ENST00000588308.5
ENST00000588610.5
ENST00000588889.5
ENST00000589876.5
ENST00000590018.1
ENST00000590043.5
ENST00000591721.5
ENST00000593255.5
CDS-3UTR CAA 90 bp AACACGCCGCCGTCGTGGGCGCCCAGCACCGCCTGTGTGATACGGTTCCCACCTACTGCACACAGCAGGTaGCCTCCATTAGATTTGGAG +
Preference number: 5 (lower is better)
Translates to: NTPPSWAPSTACVIRFPPTAHSR*PPLDLE
Trigger: CTCCAAATCTAATGGAGGCAACCTGCTGTGTGCAGT...AGGTGGGAACCGTATCACACAGGCGGTGCTGGGCGCCCACGACGGCGGCGTGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586195.5
CDS-3UTR CAA 90 bp AGCCACTGGGGTGGAAGCCGGCTGAGCGGGCAGGGTCCTGTAATCCCAGCTACTGCCTCATTGGAGCACTaGACATCCACCACCTTGGTC +
Preference number: 5 (lower is better)
Translates to: SHWGGSRLSGQGPVIPATASLEH*TSTTLV
Trigger: GACCAAGGTGGTGGATGTCAAGTGCTCCAATGAGGC...AGTAGCTGGGATTACAGGACCCTGCCCGCTCAGCCGGCTTCCACCCCAGTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399594.7
CDS-3UTR CAA 90 bp AGCGTTGATATCAGTGCCGTCCGCCCCCTCAGACCAGATCCCAAACACCCCAAAGAGCGGGCCACAGCGTaGATATCAGTGCCGTCCGCC +
Preference number: 5 (lower is better)
Translates to: SVDISAVRPLRPDPKHPKERATA*ISVPSA
Trigger: GGCGGACGGCACTGATATCAACGCTGTGGCCCGCTC...TTTGGGGTGTTTGGGATCTGGTCTGAGGGGGCGGACGGCACTGATATCAACGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000586195.5
ENST00000586405.1
ENST00000588308.5
CDS-3UTR CAA 90 bp AAGCAGCTGCTGTCCTGGGCCCAATCCAGGTGGGTGATAAAACTGGAATGGCCCAGCACACTGGTGTCCTaGCCCCCTGTGGTCAGGGCC +
Preference number: 5 (lower is better)
Translates to: KQLLSWAQSRWVIKLEWPSTLVS*PPVVRA
Trigger: GGCCCTGACCACAGGGGGCAAGGACACCAGTGTGCT...GGGCCATTCCAGTTTTATCACCCACCTGGATTGGGCCCAGGACAGCAGCTGCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000586195.5
ENST00000588308.5
CDS-3UTR CAA 90 bp ACGTACACCAAGTTGTCGTGGGAGCCCACGGCCAGGTACGCCCCGTCTGGGGAGTTTTTGGCGCTACAGTaGCTGCTGGAGGATGTGGTC +
Preference number: 5 (lower is better)
Translates to: TYTKLSWEPTARYAPSGEFLALQ*LLEDVV
Trigger: GACCACATCCTCCAGCAGCAACTGTAGCGCCAAAAA...CTCCCCAGACGGGGCGTACCTGGCCGTGGGCTCCCACGACAACTTGGTGTACGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000399594.7
CDS TCA 90 bp GTGAATACCTTCGAGGCCTCCAAGTTGGCTGCACCTCTTGGCATTTaGCCACGCCCCTACGGCCCCGCCCAACCTTTAAGCCACGCCCTT +
Preference number: 5 (lower is better)
Translates to: VNTFEASKLAAPLGI*PRPYGPAQPLSHAL
Trigger: AAGGGCGTGGCTTAAAGGTTGGGCGGGGCCGTAGGGGCGTGGTCAAATGCCAAGAGGTGCAGCCAACTTGGAGGCCTCGAAGGTATTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585386.1
ENST00000588420.1
CDS GCA 90 bp TGCAGCTGTGGGACAACCTGTAGGGACACTCACCAACCTGAAGGGTaGCACCCCCAATCAGAGTGGCAGGAGGCAGCACAGTTGGAGCAG +
Preference number: 5 (lower is better)
Translates to: CSCGTTCRDTHQPEG*HPQSEWQEAAQLEQ
Trigger: CTGCTCCAACTGTGCTGCCTCCTGCCACTCTGATTGGGGGTGGCACCCTTCAGGTTGGTGAGTGTCCCTACAGGTTGTCCCACAGCTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000588000.5
CDS GCA 90 bp CTTCTAGGCCAGCAGGCGAGTGCCGTGAGCAAGCGAGATTCTCCCTaGACCCTCTGCTGCTGGAGCTCAGGCAAACAAACCACCTCTGTC +
Preference number: 5 (lower is better)
Translates to: LLGQQASAVSKRDSP*TLCCWSSGKQTTSV
Trigger: GACAGAGGTGGTTTGTTTGCCTGAGCTCCAGCAGCAGAGGGTGCAGGGAGAATCTCGCTTGCTCACGGCACTCGCCTGCTGGCCTAGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585386.1
ENST00000588420.1
CDS CCA 90 bp GGCCCCTCTGCTGTGCTTGGAGTTAAACTCTTGGTTGCTGGATCCTaGGAAGGGGTCCTGGGTCAGGGCCAGGTCAGAGAAGGGACAGAG +
Preference number: 5 (lower is better)
Translates to: GPSAVLGVKLLVAGS*EGVLGQGQVREGTE
Trigger: CTCTGTCCCTTCTCTGACCTGGCCCTGACCCAGGACCCCTTCCCAGGATCCAGCAACCAAGAGTTTAACTCCAAGCACAGCAGAGGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588000.5
CDS CCA 90 bp CCGTGTCCAGCAGCAGCCATCTCGATGATCCTGCTCCACAGGGGCTaGTGGGAATCTGAGCTCCATAGATGCACCAGCTTATCCTGCCCG +
Preference number: 5 (lower is better)
Translates to: PCPAAAISMILLHRG*WESELHRCTSLSCP
Trigger: CGGGCAGGATAAGCTGGTGCATCTATGGAGCTCAGATTCCCACCAGCCCCTGTGGAGCAGGATCATCGAGATGGCTGCTGCTGGACACGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588308.5
CDS CCA 90 bp GCGAGTGCCGTGAGCAAGCGAGATTCTCCCTGCACCCTCTGCTGCTaGAGCTCAGGCAAACAAACCACCTCTGTCTCCCACGAGGTCTTG +
Preference number: 5 (lower is better)
Translates to: ASAVSKRDSPCTLCC*SSGKQTTSVSHEVL
Trigger: CAAGACCTCGTGGGAGACAGAGGTGGTTTGTTTGCCTGAGCTCCAGCAGCAGAGGGTGCAGGGAGAATCTCGCTTGCTCACGGCACTCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585386.1
ENST00000588420.1
CDS-3UTR CAA 90 bp CACGTACACCAAGTTGTCGTGGGAGCCCACGGCCAGGTACGCCCCGTCTGGGGATGGATGGCCAAGCATTaGATGTCATCGTTGTGTCCC +
Preference number: 5 (lower is better)
Translates to: HVHQVVVGAHGQVRPVWGWMAKH*MSSLCP
Trigger: GGGACACAACGATGACATCAAATGCTTGGCCATCCA...TCCCCAGACGGGGCGTACCTGGCCGTGGGCTCCCACGACAACTTGGTGTACGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399594.7
CDS-3UTR CAA 90 bp CACGTACACCAAGTTGTCGTGGGAGCCCACGGCCAGGTACGCCCCGTCTGGGGATTGCCTCCATTAGATTaGGAGAAGCCCACACAGCAC +
Preference number: 5 (lower is better)
Translates to: HVHQVVVGAHGQVRPVWGLPPLD*EKPTQH
Trigger: GTGCTGTGTGGGCTTCTCCAAATCTAATGGAGGCAA...TCCCCAGACGGGGCGTACCTGGCCGTGGGCTCCCACGACAACTTGGTGTACGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399594.7
ENST00000586195.5
CDS-3UTR CAA 90 bp CAAGTTGTCGTGGGAGCCCACGGCCAGGTACGCCCCGTCTGGGGAGAAGCTGACACCAATACAGCCTCATaGGAGCACTTGACATCCACC +
Preference number: 5 (lower is better)
Translates to: QVVVGAHGQVRPVWGEADTNTAS*EHLTST
Trigger: GGTGGATGTCAAGTGCTCCAATGAGGCTGTATTGGT...GTCAGCTTCTCCCCAGACGGGGCGTACCTGGCCGTGGGCTCCCACGACAACTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399594.7
ENST00000586195.5
CDS-3UTR CAA 90 bp GTGGCCCTCTGCCACGGTGCGCACAGGGCCAAAGTCCTCAGGGACCTCCACTTCACCAATACAGCCTCATaGGAGCACTTGACATCCACC +
Preference number: 5 (lower is better)
Translates to: VALCHGAHRAKVLRDLHFTNTAS*EHLTST
Trigger: GGTGGATGTCAAGTGCTCCAATGAGGCTGTATTGGT...GAAGTGGAGGTCCCTGAGGACTTTGGCCCTGTGCGCACCGTGGCAGAGGGCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586195.5
CDS-3UTR CAA 90 bp ATGGAATTGCGGGTGGTCCCCACGTACAGTGTGTCTCCGTGGCCCTCTGCCACGTTTCTCAAAGAGGCCTaGCCGCTTGCTCAAGCTGCC +
Preference number: 5 (lower is better)
Translates to: MELRVVPTYSVSPWPSATFLKEA*PLAQAA
Trigger: GGCAGCTTGAGCAAGCGGCAAGGCCTCTTTGAGAAA...CGTGGCAGAGGGCCACGGAGACACACTGTACGTGGGGACCACCCGCAATTCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586195.5
ENST00000590819.5
CDS-3UTR CAA 90 bp CCTGCAGGATGGAATTGCGGGTGGTCCCCACGTACAGTGTGTCTCCGTGGCCCTTTTCTCAAAGAGGCCTaGCCGCTTGCTCAAGCTGCC +
Preference number: 5 (lower is better)
Translates to: PAGWNCGWSPRTVCLRGPFLKEA*PLAQAA
Trigger: GGCAGCTTGAGCAAGCGGCAAGGCCTCTTTGAGAAA...AGGGCCACGGAGACACACTGTACGTGGGGACCACCCGCAATTCCATCCTGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586195.5
ENST00000590819.5
CDS-3UTR CAA 90 bp TTCCATGTTCCTCACAGCATCCGCACTGGTGATCTGCTTACAGGTAGCCGGGTCGAATGGCCCGAGCACTaGCCCAGGCGGCTGACCTTG +
Preference number: 5 (lower is better)
Translates to: FHVPHSIRTGDLLTGSRVEWPEH*PRRLTL
Trigger: CAAGGTCAGCCGCCTGGGCAAGTGCTCGGGCCATTC...GACCCGGCTACCTGTAAGCAGATCACCAGTGCGGATGCTGTGAGGAACATGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586195.5
ENST00000586405.1
CDS-3UTR CAA 90 bp ATGTCAGTCTACCCTCCCGCCCCCATAACCCCCTCTGCTATAGACATACTCTGGGAGCGGGCCACAGCGTaGATATCAGTGCCGTCCGCC +
Preference number: 5 (lower is better)
Translates to: MSVYPPAPITPSAIDILWERATA*ISVPSA
Trigger: GGCGGACGGCACTGATATCAACGCTGTGGCCCGCTC...CCAGAGTATGTCTATAGCAGAGGGGGTTATGGGGGCGGGAGGGTAGACTGACAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CAA 90 bp GTACTTGTGGCTGAGGGCTCGAGGCTGACAGCAGGGGTAGCTAAACAGGTGAACCTGTGTCCACCGTACTaGTGGCTGAGGGCTCGAGGC +
Preference number: 5 (lower is better)
Translates to: VLVAEGSRLTAGVAKQVNLCPPY*WLRARG
Trigger: GCCTCGAGCCCTCAGCCACAAGTACGGTGGACACAG...GTTCACCTGTTTAGCTACCCCTGCTGTCAGCCTCGAGCCCTCAGCCACAAGTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586195.5
ENST00000586405.1
ENST00000588308.5
CDS-3UTR CAA 90 bp GCCAGGTACGCCCCGTCTGGGGAGAAGCTGACCACTGAGATCTGTTCATTGCCGCTCGTGCCCGACAAATaGTCATCTGAGCCCGACACC +
Preference number: 5 (lower is better)
Translates to: ARYAPSGEKLTTEICSLPLVPDK*SSEPDT
Trigger: GGTGTCGGGCTCAGATGACAATTTGTCGGGCACGAG...CGGCAATGAACAGATCTCAGTGGTCAGCTTCTCCCCAGACGGGGCGTACCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399594.7
CDS-3UTR CAA 90 bp TTGTCGTGGGAGCCCACGGCCAGGTACGCCCCGTCTGGGGAGAAGCTGACCACTGTTTTGCCTTCCTTTTaGGCGCTACAGTTGCTGCTG +
Preference number: 5 (lower is better)
Translates to: LSWEPTARYAPSGEKLTTVLPSF*ALQLLL
Trigger: CAGCAGCAACTGTAGCGCCAAAAAGGAAGGCAAAAC...AGTGGTCAGCTTCTCCCCAGACGGGGCGTACCTGGCCGTGGGCTCCCACGACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000399594.7
CDS TCA 90 bp CTCCCTTCTAACCCTGTCCCTGAGTTGACTCAGTTGCTTGAGAATTaGCTGCTACCTCCCGCCAACGCTCCTTCTCCGGCCCGCCAGGCA +
Preference number: 5 (lower is better)
Translates to: LPSNPVPELTQLLEN*LLPPANAPSPARQA
Trigger: TGCCTGGCGGGCCGGAGAAGGAGCGTTGGCGGGAGGTAGCAGTCAATTCTCAAGCAACTGAGTCAACTCAGGGACAGGGTTAGAAGGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588420.1
CDS CCA 90 bp ACAGAGCGAGACTCCACCTCGATGATCCTGCTCCACAGGGGCTGGTaGGAATCTGAGCTCCATAGATGCACCAGCTTATCCTGCCCGCAG +
Preference number: 5 (lower is better)
Translates to: TERDSTSMILLHRGW*ESELHRCTSLSCPQ
Trigger: CTGCGGGCAGGATAAGCTGGTGCATCTATGGAGCTCAGATTCCCACCAGCCCCTGTGGAGCAGGATCATCGAGGTGGAGTCTCGCTCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399594.7
CDS CCA 90 bp GTGACAGAGCGAGACTCCACCTCGATGATCCTGCTCCACAGGGGCTaGTGGGAATCTGAGCTCCATAGATGCACCAGCTTATCCTGCCCG +
Preference number: 5 (lower is better)
Translates to: VTERDSTSMILLHRG*WESELHRCTSLSCP
Trigger: CGGGCAGGATAAGCTGGTGCATCTATGGAGCTCAGATTCCCACCAGCCCCTGTGGAGCAGGATCATCGAGGTGGAGTCTCGCTCTGTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399594.7
CDS CCA 90 bp TGCTTGGAGTTAAACTCTTGGTTGCTGGATCCTGGGAAGGGGTCCTaGGTCAGGGCCAGGTCAGAGAAGGGACAGAGCAGGGAGGTGAGG +
Preference number: 5 (lower is better)
Translates to: CLELNSWLLDPGKGS*VRARSEKGQSREVR
Trigger: CCTCACCTCCCTGCTCTGTCCCTTCTCTGACCTGGCCCTGACCCAGGACCCCTTCCCAGGATCCAGCAACCAAGAGTTTAACTCCAAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588000.5
CDS CCA 90 bp TGTCCAGCAGCAGCCATCTCGATGATCCTGCTCCACAGGGGCTGGTaGGAATCTGAGCTCCATAGATGCACCAGCTTATCCTGCCCGCAG +
Preference number: 5 (lower is better)
Translates to: CPAAAISMILLHRGW*ESELHRCTSLSCPQ
Trigger: CTGCGGGCAGGATAAGCTGGTGCATCTATGGAGCTCAGATTCCCACCAGCCCCTGTGGAGCAGGATCATCGAGATGGCTGCTGCTGGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588308.5
CDS-3UTR CAA 90 bp GCCAGGTACGCCCCGTCTGGGGAGAAGCTGACCACTGAGATCTGTTCATTGCCGTTTCTCAAAGAGGCCTaGCCGCTTGCTCAAGCTGCC +
Preference number: 5 (lower is better)
Translates to: ARYAPSGEKLTTEICSLPFLKEA*PLAQAA
Trigger: GGCAGCTTGAGCAAGCGGCAAGGCCTCTTTGAGAAA...CGGCAATGAACAGATCTCAGTGGTCAGCTTCTCCCCAGACGGGGCGTACCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000399594.7
ENST00000586195.5
ENST00000590819.5
CDS-3UTR CAA 90 bp ACTGGTGTCCTTGCCCCCTGTGGTCAGGGCCATGCTGTCATCCCACAAGAAGGCTTTCTCAAAGAGGCCTaGCCGCTTGCTCAAGCTGCC +
Preference number: 5 (lower is better)
Translates to: TGVLAPCGQGHAVIPQEGFLKEA*PLAQAA
Trigger: GGCAGCTTGAGCAAGCGGCAAGGCCTCTTTGAGAAA...GCCTTCTTGTGGGATGACAGCATGGCCCTGACCACAGGGGGCAAGGACACCAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586195.5
ENST00000588308.5
CDS-3UTR CAA 90 bp ACCCCAAACCAAACACCAATGGATCCCCAAAGCGATGTGACTCCCTCTTCCCACGAATGGCCCGAGCACTaGCCCAGGCGGCTGACCTTG +
Preference number: 5 (lower is better)
Translates to: TPNQTPMDPQSDVTPSSHEWPEH*PRRLTL
Trigger: CAAGGTCAGCCGCCTGGGCAAGTGCTCGGGCCATTC...GTGGGAAGAGGGAGTCACATCGCTTTGGGGATCCATTGGTGTTTGGTTTGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
CDS-3UTR CAA 90 bp ACCCCAAACCAAACACCAATGGATCCCCAAAGCGATGTGACTCCCTCTTCCCACAGCACACTGGTGTCCTaGCCCCCTGTGGTCAGGGCC +
Preference number: 5 (lower is better)
Translates to: TPNQTPMDPQSDVTPSSHSTLVS*PPVVRA
Trigger: GGCCCTGACCACAGGGGGCAAGGACACCAGTGTGCT...GTGGGAAGAGGGAGTCACATCGCTTTGGGGATCCATTGGTGTTTGGTTTGGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CAA 90 bp AGCCACTGGGGTGGAAGCCGGCTGAGCGGGCAGGGTCCTGTAATCCCAGCTACTTGGTATCACACCCATTaGTCTAGGGAGAAGGGATGG +
Preference number: 5 (lower is better)
Translates to: SHWGGSRLSGQGPVIPATWYHTH*SREKGW
Trigger: CCATCCCTTCTCCCTAGACAAATGGGTGTGATACCA...AGTAGCTGGGATTACAGGACCCTGCCCGCTCAGCCGGCTTCCACCCCAGTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399594.7
CDS GCA 90 bp CCTAGAAGCAAAGTCCTCTGGCCGTCCCTTTCCAGTCCCACACTCTaGCCTCAACTCAACACCAAATCCACCCCCACCCCCTCTGTCTGT +
Preference number: 5 (lower is better)
Translates to: PRSKVLWPSLSSPTL*PQLNTKSTPTPSVC
Trigger: ACAGACAGAGGGGGTGGGGGTGGATTTGGTGTTGAGTTGAGGGCAGAGTGTGGGACTGGAAAGGGACGGCCAGAGGACTTTGCTTCTAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000399594.7
CDS CCA 90 bp GCCAGGGCCAGAGGATTTGGGAGGTATCCTAGAAGCAAAGTCCTCTaGCCGTCCCTTTCCAGTCCCACACTCTGCCCTCAACTCAACACC +
Preference number: 5 (lower is better)
Translates to: ARARGFGRYPRSKVL*PSLSSPTLCPQLNT
Trigger: GGTGTTGAGTTGAGGGCAGAGTGTGGGACTGGAAAGGGACGGCCAGAGGACTTTGCTTCTAGGATACCTCCCAAATCCTCTGGCCCTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399594.7
CDS-3UTR CAA 90 bp GGCTGGTGGGAATCTGAGCTCCATAGATGCACCAGCTTATCCTGCCCGCAGGTCGCCTCATTGGAGCACTaGACATCCACCACCTTGGTC +
Preference number: 5 (lower is better)
Translates to: GWWESELHRCTSLSCPQVASLEH*TSTTLV
Trigger: GACCAAGGTGGTGGATGTCAAGTGCTCCAATGAGGC...GACCTGCGGGCAGGATAAGCTGGTGCATCTATGGAGCTCAGATTCCCACCAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586195.5
CDS-3UTR CAA 90 bp ACCCCAAACCAAACACCAATGGATCCCCAAAGCGATGTGACTCCCTCTTCCCACCCCTGCAGGATGGAATaGCGGGTGGTCCCCACGTAC +
Preference number: 5 (lower is better)
Translates to: TPNQTPMDPQSDVTPSSHPCRME*RVVPTY
Trigger: GTACGTGGGGACCACCCGCAATTCCATCCTGCAGGG...GTGGGAAGAGGGAGTCACATCGCTTTGGGGATCCATTGGTGTTTGGTTTGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CAA 90 bp ATGTCAGTCTACCCTCCCGCCCCCATAACCCCCTCTGCTATAGACATACTCTGGTACACGTACACCAAGTaGTCGTGGGAGCCCACGGCC +
Preference number: 5 (lower is better)
Translates to: MSVYPPAPITPSAIDILWYTYTK*SWEPTA
Trigger: GGCCGTGGGCTCCCACGACAACTTGGTGTACGTGTA...CCAGAGTATGTCTATAGCAGAGGGGGTTATGGGGGCGGGAGGGTAGACTGACAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
CDS-3UTR CAA 90 bp ACCCCAAACCAAACACCAATGGATCCCCAAAGCGATGTGACTCCCTCTTCCCACCTGTGTCCACCGTACTaGTGGCTGAGGGCTCGAGGC +
Preference number: 5 (lower is better)
Translates to: TPNQTPMDPQSDVTPSSHLCPPY*WLRARG
Trigger: GCCTCGAGCCCTCAGCCACAAGTACGGTGGACACAG...GTGGGAAGAGGGAGTCACATCGCTTTGGGGATCCATTGGTGTTTGGTTTGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CAA 90 bp CCCCTGTCAGGACTGGCTGAGAAGGCATCACATGCTGGGGTCTTCACAGCCCGCACAAGAAGGCCACATTaGTCACATGGCTGCTGTGTC +
Preference number: 5 (lower is better)
Translates to: PLSGLAEKASHAGVFTARTRRPH*SHGCCV
Trigger: GACACAGCAGCCATGTGACAAATGTGGCCTTCTTGT...GCGGGCTGTGAAGACCCCAGCATGTGATGCCTTCTCAGCCAGTCCTGACAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586405.1
CDS-3UTR CAA 90 bp AAACCAAACACCAATGGATCCCCAAAGCGATGTGACTCCCTCTTCCCACCCGGAGAGGTCGCCTCCTTCTaGGGAGAGGATGGGGACGTG +
Preference number: 5 (lower is better)
Translates to: KPNTNGSPKRCDSLFPPGEVASF*GEDGDV
Trigger: CACGTCCCCATCCTCTCCCAAGAAGGAGGCGACCTC...TCCGGGTGGGAAGAGGGAGTCACATCGCTTTGGGGATCCATTGGTGTTTGGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536630.5
ENST00000587152.6
CDS-3UTR CAA 90 bp TACCCTCCCGCCCCCATAACCCCCTCTGCTATAGACATACTCTGGGTATATATTATCCTAGGGCCAGGATaGGCTGCGCCCGGATCCCCC +
Preference number: 5 (lower is better)
Translates to: YPPAPITPSAIDILWVYIILGPG*AAPGSP
Trigger: GGGGGATCCGGGCGCAGCCAATCCTGGCCCTAGGAT...AATATATACCCAGAGTATGTCTATAGCAGAGGGGGTTATGGGGGCGGGAGGGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000587152.6
CDS GCA 90 bp TTCACGTATTCCTTATGTGAATACCTTCGAGGCCTCCAAGTTGGCTaGACCTCTTGGCATTTGACCACGCCCCTACGGCCCCGCCCAACC +
Preference number: 5 (lower is better)
Translates to: FTYSLCEYLRGLQVG*TSWHLTTPLRPRPT
Trigger: GGTTGGGCGGGGCCGTAGGGGCGTGGTCAAATGCCAAGAGGTGCAGCCAACTTGGAGGCCTCGAAGGTATTCACATAAGGAATACGTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585386.1
ENST00000588420.1
CDS GCA 90 bp TGGTGTGTGACTCAAGGCAAATCCTGCCCCTTCTCCAGGGACCTCTaGTTTCTTCTTTGCACAATGGGAGGCAGGAGGGCATGGTGGCTC +
Preference number: 5 (lower is better)
Translates to: WCVTQGKSCPFSRDL*FLLCTMGGRRAWWL
Trigger: GAGCCACCATGCCCTCCTGCCTCCCATTGTGCAAAGAAGAAAGCAGAGGTCCCTGGAGAAGGGGCAGGATTTGCCTTGAGTCACACACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592482.5
CDS CCA 90 bp TCCTTATGTGAATACCTTCGAGGCCTCCAAGTTGGCTGCACCTCTTaGCATTTGACCACGCCCCTACGGCCCCGCCCAACCTTTAAGCCA +
Preference number: 5 (lower is better)
Translates to: SLCEYLRGLQVGCTS*HLTTPLRPRPTFKP
Trigger: TGGCTTAAAGGTTGGGCGGGGCCGTAGGGGCGTGGTCAAATGCCAAGAGGTGCAGCCAACTTGGAGGCCTCGAAGGTATTCACATAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585386.1
ENST00000588420.1
CDS CCA 90 bp AGTATGTCTGAAGGGGGCCTCAATTGGGCATCTGAACCCATGCCCTaGTGTGTGACTCAAGGCAAATCCTGCCCCTTCTCCAGGGACCTC +
Preference number: 5 (lower is better)
Translates to: SMSEGGLNWASEPMP*CVTQGKSCPFSRDL
Trigger: GAGGTCCCTGGAGAAGGGGCAGGATTTGCCTTGAGTCACACACCAGGGCATGGGTTCAGATGCCCAATTGAGGCCCCCTTCAGACATACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592482.5
CDS-3UTR CAA 90 bp GTCATGGGTCTCCGTGTCCAGCAGCAGCCATCTGCCAGTCACTGTACCCACAGCTTGCCTCCATTAGATTaGGAGAAGCCCACACAGCAC +
Preference number: 5 (lower is better)
Translates to: VMGLRVQQQPSASHCTHSLPPLD*EKPTQH
Trigger: GTGCTGTGTGGGCTTCTCCAAATCTAATGGAGGCAA...GCTGTGGGTACAGTGACTGGCAGATGGCTGCTGCTGGACACGGAGACCCATGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399594.7
ENST00000586195.5
CDS-3UTR CAA 90 bp GTCATGGGTCTCCGTGTCCAGCAGCAGCCATCTGCCAGTCACTGTACCCACAGCACTGCACACAGCAGGTaGCCTCCATTAGATTTGGAG +
Preference number: 5 (lower is better)
Translates to: VMGLRVQQQPSASHCTHSTAHSR*PPLDLE
Trigger: CTCCAAATCTAATGGAGGCAACCTGCTGTGTGCAGT...GCTGTGGGTACAGTGACTGGCAGATGGCTGCTGCTGGACACGGAGACCCATGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399594.7
ENST00000586195.5
CDS-3UTR CAA 90 bp GGAGTTGGTGACAAAGCAGCTGCTGTCCTGGGCCCAATCCAGGTGGGTGATAAATTGACATCCACCACCTaGGTCTCCTTGGCCCAGTCC +
Preference number: 5 (lower is better)
Translates to: GVGDKAAAVLGPIQVGDKLTSTT*VSLAQS
Trigger: GGACTGGGCCAAGGAGACCAAGGTGGTGGATGTCAA...TTTATCACCCACCTGGATTGGGCCCAGGACAGCAGCTGCTTTGTCACCAACTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586195.5
ENST00000588308.5
CDS-3UTR CAA 90 bp TTCCATGTTCCTCACAGCATCCGCACTGGTGATCTGCTTACAGGTAGCCGGGTCTTGACATCCACCACCTaGGTCTCCTTGGCCCAGTCC +
Preference number: 5 (lower is better)
Translates to: FHVPHSIRTGDLLTGSRVLTSTT*VSLAQS
Trigger: GGACTGGGCCAAGGAGACCAAGGTGGTGGATGTCAA...GACCCGGCTACCTGTAAGCAGATCACCAGTGCGGATGCTGTGAGGAACATGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586195.5
ENST00000588308.5
CDS-3UTR CAA 90 bp TACCCTCCCGCCCCCATAACCCCCTCTGCTATAGACATACTCTGGGTATATATTGAATGGCCCGAGCACTaGCCCAGGCGGCTGACCTTG +
Preference number: 5 (lower is better)
Translates to: YPPAPITPSAIDILWVYIEWPEH*PRRLTL
Trigger: CAAGGTCAGCCGCCTGGGCAAGTGCTCGGGCCATTC...AATATATACCCAGAGTATGTCTATAGCAGAGGGGGTTATGGGGGCGGGAGGGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
CDS-3UTR CAA 90 bp ACCACGTCGCCACCTTCCAAAAAGGTCACACACAGCACATACTTCGGTTTCTCAGAATGGCCCGAGCACTaGCCCAGGCGGCTGACCTTG +
Preference number: 5 (lower is better)
Translates to: TTSPPSKKVTHSTYFGFSEWPEH*PRRLTL
Trigger: CAAGGTCAGCCGCCTGGGCAAGTGCTCGGGCCATTC...TGAGAAACCGAAGTATGTGCTGTGTGTGACCTTTTTGGAAGGTGGCGACGTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586195.5
CDS-3UTR CAA 90 bp ACTGGTGTCCTTGCCCCCTGTGGTCAGGGCCATGCTGTCATCCCACAAGAAGGCACAAGAAGGCCACATTaGTCACATGGCTGCTGTGTC +
Preference number: 5 (lower is better)
Translates to: TGVLAPCGQGHAVIPQEGTRRPH*SHGCCV
Trigger: GACACAGCAGCCATGTGACAAATGTGGCCTTCTTGT...GCCTTCTTGTGGGATGACAGCATGGCCCTGACCACAGGGGGCAAGGACACCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586195.5
ENST00000588308.5
CDS-3UTR CAA 90 bp TACCCTCCCGCCCCCATAACCCCCTCTGCTATAGACATACTCTGGGTATATATTAGCACACTGGTGTCCTaGCCCCCTGTGGTCAGGGCC +
Preference number: 5 (lower is better)
Translates to: YPPAPITPSAIDILWVYISTLVS*PPVVRA
Trigger: GGCCCTGACCACAGGGGGCAAGGACACCAGTGTGCT...AATATATACCCAGAGTATGTCTATAGCAGAGGGGGTTATGGGGGCGGGAGGGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS CCA 90 bp GACCCAGGGAAGACCTTTCCCAGTATGTCTGAAGGGGGCCTCAATTaGGCATCTGAACCCATGCCCTGGTGTGTGACTCAAGGCAAATCC +
Preference number: 5 (lower is better)
Translates to: DPGKTFPSMSEGGLN*ASEPMPWCVTQGKS
Trigger: GGATTTGCCTTGAGTCACACACCAGGGCATGGGTTCAGATGCCCAATTGAGGCCCCCTTCAGACATACTGGGAAAGGTCTTCCCTGGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592482.5
CDS-3UTR CAA 90 bp AAACACCCCAAACCAAACACCAATGGATCCCCAAAGCGATGTGACTCCCTCTTCCCCTGCAGGATGGAATaGCGGGTGGTCCCCACGTAC +
Preference number: 5 (lower is better)
Translates to: KHPKPNTNGSPKRCDSLFPCRME*RVVPTY
Trigger: GTACGTGGGGACCACCCGCAATTCCATCCTGCAGGG...GAAGAGGGAGTCACATCGCTTTGGGGATCCATTGGTGTTTGGTTTGGGGTGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CAA 90 bp TCCCGCCCCCATAACCCCCTCTGCTATAGACATACTCTGGGTATATATTACTCTAGCACACTGGTGTCCTaGCCCCCTGTGGTCAGGGCC +
Preference number: 5 (lower is better)
Translates to: SRPHNPLCYRHTLGIYYSSTLVS*PPVVRA
Trigger: GGCCCTGACCACAGGGGGCAAGGACACCAGTGTGCT...AGAGTAATATATACCCAGAGTATGTCTATAGCAGAGGGGGTTATGGGGGCGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CAA 90 bp TTGTCGTGGGAGCCCACGGCCAGGTACGCCCCGTCTGGGGAGAAGCTGACCACTATAACTTCTTTGGTTTaGCCTTCCTTTTTGGCGCTA +
Preference number: 5 (lower is better)
Translates to: LSWEPTARYAPSGEKLTTITSLV*PSFLAL
Trigger: TAGCGCCAAAAAGGAAGGCAAAACCAAAGAAGTTAT...AGTGGTCAGCTTCTCCCCAGACGGGGCGTACCTGGCCGTGGGCTCCCACGACAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000399594.7
CDS GCA 90 bp CTCGCTTTCTGTACTTATCTCTGCCTGGACATGCCAAAACCCGCCTaGAAATGGGCAAGGACCAGCTGGGCCCTAGGCACTGGGTTTAAA +
Preference number: 5 (lower is better)
Translates to: LAFCTYLCLDMPKPA*KWARTSWALGTGFK
Trigger: TTTAAACCCAGTGCCTAGGGCCCAGCTGGTCCTTGCCCATTTGCAGGCGGGTTTTGGCATGTCCAGGCAGAGATAAGTACAGAAAGCGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586902.5
ENST00000590580.5
CDS-3UTR CAA 90 bp ACCCCAAACCAAACACCAATGGATCCCCAAAGCGATGTGACTCCCTCTTCCCACGCCTCATTGGAGCACTaGACATCCACCACCTTGGTC +
Preference number: 5 (lower is better)
Translates to: TPNQTPMDPQSDVTPSSHASLEH*TSTTLV
Trigger: GACCAAGGTGGTGGATGTCAAGTGCTCCAATGAGGC...GTGGGAAGAGGGAGTCACATCGCTTTGGGGATCCATTGGTGTTTGGTTTGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CAA 90 bp ACCCCAAACCAAACACCAATGGATCCCCAAAGCGATGTGACTCCCTCTTCCCACTTTCTCAAAGAGGCCTaGCCGCTTGCTCAAGCTGCC +
Preference number: 5 (lower is better)
Translates to: TPNQTPMDPQSDVTPSSHFLKEA*PLAQAA
Trigger: GGCAGCTTGAGCAAGCGGCAAGGCCTCTTTGAGAAA...GTGGGAAGAGGGAGTCACATCGCTTTGGGGATCCATTGGTGTTTGGTTTGGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CAA 90 bp AAACACCCCAAACCAAACACCAATGGATCCCCAAAGCGATGTGACTCCCTCTTCTACACGTACACCAAGTaGTCGTGGGAGCCCACGGCC +
Preference number: 5 (lower is better)
Translates to: KHPKPNTNGSPKRCDSLFYTYTK*SWEPTA
Trigger: GGCCGTGGGCTCCCACGACAACTTGGTGTACGTGTA...GAAGAGGGAGTCACATCGCTTTGGGGATCCATTGGTGTTTGGTTTGGGGTGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
CDS-3UTR CAA 90 bp TCTGCTATAGACATACTCTGGGTATATATTACTCTACTCGGCAATAGACATCTCCCCAGGCGGCTGACCTaGCGGCCGCCCTGGTCCACC +
Preference number: 5 (lower is better)
Translates to: SAIDILWVYITLLGNRHLPRRLT*RPPWST
Trigger: GGTGGACCAGGGCGGCCGCAAGGTCAGCCGCCTGGG...GAGATGTCTATTGCCGAGTAGAGTAATATATACCCAGAGTATGTCTATAGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
CDS TCA 90 bp CTGCTACCTCCCGCCAACGCTCCTTCTCCGGCCCGCCAGGCATTCTaGTTACGTCCATTTTCACGTATTCCTTATGTGAATACCTTCGAG +
Preference number: 5 (lower is better)
Translates to: LLPPANAPSPARQAF*LRPFSRIPYVNTFE
Trigger: CTCGAAGGTATTCACATAAGGAATACGTGAAAATGGACGTAATCAGAATGCCTGGCGGGCCGGAGAAGGAGCGTTGGCGGGAGGTAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585386.1
ENST00000588420.1
CDS-3UTR CAA 90 bp ATGTCAGTCTACCCTCCCGCCCCCATAACCCCCTCTGCTATAGACATACTCTGGACCAATACAGCCTCATaGGAGCACTTGACATCCACC +
Preference number: 5 (lower is better)
Translates to: MSVYPPAPITPSAIDILWTNTAS*EHLTST
Trigger: GGTGGATGTCAAGTGCTCCAATGAGGCTGTATTGGT...CCAGAGTATGTCTATAGCAGAGGGGGTTATGGGGGCGGGAGGGTAGACTGACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CAA 90 bp GCCCCCATAACCCCCTCTGCTATAGACATACTCTGGGTATATATTACTCTACTCCCCTGCAGGATGGAATaGCGGGTGGTCCCCACGTAC +
Preference number: 5 (lower is better)
Translates to: APITPSAIDILWVYITLLPCRME*RVVPTY
Trigger: GTACGTGGGGACCACCCGCAATTCCATCCTGCAGGG...GAGTAGAGTAATATATACCCAGAGTATGTCTATAGCAGAGGGGGTTATGGGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CAA 90 bp CCCGCCCCCATAACCCCCTCTGCTATAGACATACTCTGGGTATATATTACTCTATACACGTACACCAAGTaGTCGTGGGAGCCCACGGCC +
Preference number: 5 (lower is better)
Translates to: PAPITPSAIDILWVYITLYTYTK*SWEPTA
Trigger: GGCCGTGGGCTCCCACGACAACTTGGTGTACGTGTA...TAGAGTAATATATACCCAGAGTATGTCTATAGCAGAGGGGGTTATGGGGGCGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
CDS-3UTR CAA 90 bp ATACTCTGGGTATATATTACTCTACTCGGCAATAGACATCTCCCGAAAATAGAACCCAGGCGGCTGACCTaGCGGCCGCCCTGGTCCACC +
Preference number: 5 (lower is better)
Translates to: ILWVYITLLGNRHLPKIEPRRLT*RPPWST
Trigger: GGTGGACCAGGGCGGCCGCAAGGTCAGCCGCCTGGG...TTCTATTTTCGGGAGATGTCTATTGCCGAGTAGAGTAATATATACCCAGAGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
CDS-3UTR CAA 90 bp GCCCCCATAACCCCCTCTGCTATAGACATACTCTGGGTATATATTACTCTACTCCTGTGTCCACCGTACTaGTGGCTGAGGGCTCGAGGC +
Preference number: 5 (lower is better)
Translates to: APITPSAIDILWVYITLLLCPPY*WLRARG
Trigger: GCCTCGAGCCCTCAGCCACAAGTACGGTGGACACAG...GAGTAGAGTAATATATACCCAGAGTATGTCTATAGCAGAGGGGGTTATGGGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CAA 90 bp AAACCAAACACCAATGGATCCCCAAAGCGATGTGACTCCCTCTTCCCACCCGGATTTTTGGCGCTACAGTaGCTGCTGGAGGATGTGGTC +
Preference number: 5 (lower is better)
Translates to: KPNTNGSPKRCDSLFPPGFLALQ*LLEDVV
Trigger: GACCACATCCTCCAGCAGCAACTGTAGCGCCAAAAA...TCCGGGTGGGAAGAGGGAGTCACATCGCTTTGGGGATCCATTGGTGTTTGGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536630.5
ENST00000587152.6
CDS-3UTR CAA 90 bp ACCCCAAACCAAACACCAATGGATCCCCAAAGCGATGTGACTCCCTCTTCCCACTTTTTGGCGCTACAGTaGCTGCTGGAGGATGTGGTC +
Preference number: 5 (lower is better)
Translates to: TPNQTPMDPQSDVTPSSHFLALQ*LLEDVV
Trigger: GACCACATCCTCCAGCAGCAACTGTAGCGCCAAAAA...GTGGGAAGAGGGAGTCACATCGCTTTGGGGATCCATTGGTGTTTGGTTTGGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000536630.5
ENST00000587152.6
CDS-3UTR CAA 90 bp ACCCCAAACCAAACACCAATGGATCCCCAAAGCGATGTGACTCCCTCTTCCCACCTCGTGCCCGACAAATaGTCATCGTTGCAGTATCGC +
Preference number: 5 (lower is better)
Translates to: TPNQTPMDPQSDVTPSSHLVPDK*SSLQYR
Trigger: GCGATACTGCAACGATGACAATTTGTCGGGCACGAG...GTGGGAAGAGGGAGTCACATCGCTTTGGGGATCCATTGGTGTTTGGTTTGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587152.6
CDS-3UTR CAA 90 bp ACCCCAAACCAAACACCAATGGATCCCCAAAGCGATGTGACTCCCTCTTCCCACTGGATGGCCAAGCATTaGATGTCATCGTTGTGTCCC +
Preference number: 5 (lower is better)
Translates to: TPNQTPMDPQSDVTPSSHWMAKH*MSSLCP
Trigger: GGGACACAACGATGACATCAAATGCTTGGCCATCCA...GTGGGAAGAGGGAGTCACATCGCTTTGGGGATCCATTGGTGTTTGGTTTGGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CAA 90 bp TACCCTCCCGCCCCCATAACCCCCTCTGCTATAGACATACTCTGGGTATATATTTTTCTCAAAGAGGCCTaGCCGCTTGCTCAAGCTGCC +
Preference number: 5 (lower is better)
Translates to: YPPAPITPSAIDILWVYIFLKEA*PLAQAA
Trigger: GGCAGCTTGAGCAAGCGGCAAGGCCTCTTTGAGAAA...AATATATACCCAGAGTATGTCTATAGCAGAGGGGGTTATGGGGGCGGGAGGGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CAA 90 bp GCCCCCATAACCCCCTCTGCTATAGACATACTCTGGGTATATATTACTCTACTCTACACGTACACCAAGTaGTCGTGGGAGCCCACGGCC +
Preference number: 5 (lower is better)
Translates to: APITPSAIDILWVYITLLYTYTK*SWEPTA
Trigger: GGCCGTGGGCTCCCACGACAACTTGGTGTACGTGTA...GAGTAGAGTAATATATACCCAGAGTATGTCTATAGCAGAGGGGGTTATGGGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
CDS TCA 90 bp CTCTCCTGTACCTTAATAACCACGCCCATAAGCCAAGCTCCTCCCTaGCTTCCTCACCCAGTAGACCTGACCGTCCAGCTTCTAAAAACT +
Preference number: 5 (lower is better)
Translates to: LSCTLITTPISQAPP*LPHPVDLTVQLLKT
Trigger: AGTTTTTAGAAGCTGGACGGTCAGGTCTACTGGGTGAGGAAGTCAGGGAGGAGCTTGGCTTATGGGCGTGGTTATTAAGGTACAGGAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000585386.1
ENST00000588420.1
CDS TCA 90 bp CCGCCTCCGCCTCCCAAACTGCTAGAATTATATAGCCTTAGTTTTTaGCTCTGTCCAGATCTTCAGTATGGCCCCGCCTCTGGAGTTGAC +
Preference number: 5 (lower is better)
Translates to: PPPPPKLLELYSLSF*LCPDLQYGPASGVD
Trigger: GTCAACTCCAGAGGCGGGGCCATACTGAAGATCTGGACAGAGTCAAAAACTAAGGCTATATAATTCTAGCAGTTTGGGAGGCGGAGGCGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588420.1
CDS-3UTR CAA 90 bp CATGTTCCTCACAGCATCCGCACTGGTGATCTGCTTACAGGTAGCCGGGTCCCACTGAAGATAACTTCTTaGGTTTTGCCAGCTCCAAAG +
Preference number: 5 (lower is better)
Translates to: HVPHSIRTGDLLTGSRVPLKITS*VLPAPK
Trigger: CTTTGGAGCTGGCAAAACCAAAGAAGTTATCTTCAG...TGGGACCCGGCTACCTGTAAGCAGATCACCAGTGCGGATGCTGTGAGGAACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586195.5
ENST00000588308.5
CDS-3UTR CAA 90 bp CCAGGTCATGGGTCTCCGTGTCCAGCAGCAGCCATCTGCCAGTCACTGTACCCACTGAAGATAACTTCTTaGGTTTTGCCTTCCTTTTTG +
Preference number: 5 (lower is better)
Translates to: PGHGSPCPAAAICQSLYPLKITS*VLPSFL
Trigger: CAAAAAGGAAGGCAAAACCAAAGAAGTTATCTTCAG...TGGGTACAGTGACTGGCAGATGGCTGCTGCTGGACACGGAGACCCATGACCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399594.7
CDS-3UTR CAA 90 bp ATGTCAGTCTACCCTCCCGCCCCCATAACCCCCTCTGCTATAGACATACTCTGGCTGAAGATAACTTCTTaGGTTTTGCCAGCTCCAAAG +
Preference number: 5 (lower is better)
Translates to: MSVYPPAPITPSAIDILWLKITS*VLPAPK
Trigger: CTTTGGAGCTGGCAAAACCAAAGAAGTTATCTTCAG...CCAGAGTATGTCTATAGCAGAGGGGGTTATGGGGGCGGGAGGGTAGACTGACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000245925.8
ENST00000586195.5
ENST00000588308.5
CDS-3UTR CAA 90 bp TACCCTCCCGCCCCCATAACCCCCTCTGCTATAGACATACTCTGGGTATATATTTTGCCTCCATTAGATTaGGAGAAGCCCACACAGCAC +
Preference number: 5 (lower is better)
Translates to: YPPAPITPSAIDILWVYILPPLD*EKPTQH
Trigger: GTGCTGTGTGGGCTTCTCCAAATCTAATGGAGGCAA...AATATATACCCAGAGTATGTCTATAGCAGAGGGGGTTATGGGGGCGGGAGGGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CAA 90 bp CCCCATAACCCCCTCTGCTATAGACATACTCTGGGTATATATTACTCTACTCGGGCCTCATTGGAGCACTaGACATCCACCACCTTGGTC +
Preference number: 5 (lower is better)
Translates to: PHNPLCYRHTLGIYYSTRASLEH*TSTTLV
Trigger: GACCAAGGTGGTGGATGTCAAGTGCTCCAATGAGGC...CCGAGTAGAGTAATATATACCCAGAGTATGTCTATAGCAGAGGGGGTTATGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CAA 90 bp ATAGACATACTCTGGGTATATATTACTCTACTCGGCAATAGACATCTCCCGAAAGAGCGGGCCACAGCGTaGATATCAGTGCCGTCCGCC +
Preference number: 5 (lower is better)
Translates to: IDILWVYITLLGNRHLPKERATA*ISVPSA
Trigger: GGCGGACGGCACTGATATCAACGCTGTGGCCCGCTC...TTTCGGGAGATGTCTATTGCCGAGTAGAGTAATATATACCCAGAGTATGTCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS TCA 90 bp CCCGCCAGGCATTCTGATTACGTCCATTTTCACGTATTCCTTATGTaGATACCTTCGAGGCCTCCAAGTTGGCTGCACCTCTTGGCATTT +
Preference number: 5 (lower is better)
Translates to: PARHSDYVHFHVFLM*IPSRPPSWLHLLAF
Trigger: AAATGCCAAGAGGTGCAGCCAACTTGGAGGCCTCGAAGGTATTCACATAAGGAATACGTGAAAATGGACGTAATCAGAATGCCTGGCGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585386.1
ENST00000588420.1
CDS-3UTR CAA 90 bp CCCGCCCCCATAACCCCCTCTGCTATAGACATACTCTGGGTATATATTACTCTATTGCCTCCATTAGATTaGGAGAAGCCCACACAGCAC +
Preference number: 5 (lower is better)
Translates to: PAPITPSAIDILWVYITLLPPLD*EKPTQH
Trigger: GTGCTGTGTGGGCTTCTCCAAATCTAATGGAGGCAA...TAGAGTAATATATACCCAGAGTATGTCTATAGCAGAGGGGGTTATGGGGGCGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CAA 90 bp CCCGCCCCCATAACCCCCTCTGCTATAGACATACTCTGGGTATATATTACTCTAACTGCACACAGCAGGTaGCCTCCATTAGATTTGGAG +
Preference number: 5 (lower is better)
Translates to: PAPITPSAIDILWVYITLTAHSR*PPLDLE
Trigger: CTCCAAATCTAATGGAGGCAACCTGCTGTGTGCAGT...TAGAGTAATATATACCCAGAGTATGTCTATAGCAGAGGGGGTTATGGGGGCGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CAA 90 bp ACCCCCTCTGCTATAGACATACTCTGGGTATATATTACTCTACTCGGCAATAGATTGACATCCACCACCTaGGTCTCCTTGGCCCAGTCC +
Preference number: 5 (lower is better)
Translates to: TPSAIDILWVYITLLGNRLTSTT*VSLAQS
Trigger: GGACTGGGCCAAGGAGACCAAGGTGGTGGATGTCAA...TCTATTGCCGAGTAGAGTAATATATACCCAGAGTATGTCTATAGCAGAGGGGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CAA 90 bp CCACCTTCCAAAAAGGTCACACACAGCACATACTTCGGTTTCTCATGTTTCTCATTTCTCAAAGAGGCCTaGCCGCTTGCTCAAGCTGCC +
Preference number: 5 (lower is better)
Translates to: PPSKKVTHSTYFGFSCFSFLKEA*PLAQAA
Trigger: GGCAGCTTGAGCAAGCGGCAAGGCCTCTTTGAGAAA...TGAGAAACATGAGAAACCGAAGTATGTGCTGTGTGTGACCTTTTTGGAAGGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586195.5
ENST00000592853.5
CDS-3UTR CAA 90 bp ATAGACATACTCTGGGTATATATTACTCTACTCGGCAATAGACATCTCCCGAAACCCTGCAGGATGGAATaGCGGGTGGTCCCCACGTAC +
Preference number: 5 (lower is better)
Translates to: IDILWVYITLLGNRHLPKPCRME*RVVPTY
Trigger: GTACGTGGGGACCACCCGCAATTCCATCCTGCAGGG...TTTCGGGAGATGTCTATTGCCGAGTAGAGTAATATATACCCAGAGTATGTCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CAA 90 bp CTCTGGGTATATATTACTCTACTCGGCAATAGACATCTCCCGAAAATAGAATTCCTGTGTCCACCGTACTaGTGGCTGAGGGCTCGAGGC +
Preference number: 5 (lower is better)
Translates to: LWVYITLLGNRHLPKIEFLCPPY*WLRARG
Trigger: GCCTCGAGCCCTCAGCCACAAGTACGGTGGACACAG...GAATTCTATTTTCGGGAGATGTCTATTGCCGAGTAGAGTAATATATACCCAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CAA 90 bp ATAGACATACTCTGGGTATATATTACTCTACTCGGCAATAGACATCTCCCGAAACTGTGTCCACCGTACTaGTGGCTGAGGGCTCGAGGC +
Preference number: 5 (lower is better)
Translates to: IDILWVYITLLGNRHLPKLCPPY*WLRARG
Trigger: GCCTCGAGCCCTCAGCCACAAGTACGGTGGACACAG...TTTCGGGAGATGTCTATTGCCGAGTAGAGTAATATATACCCAGAGTATGTCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CAA 90 bp CTCTGGGTATATATTACTCTACTCGGCAATAGACATCTCCCGAAAATAGAATTCGAGGTCGCCTCCTTCTaGGGAGAGGATGGGGACGTG +
Preference number: 5 (lower is better)
Translates to: LWVYITLLGNRHLPKIEFEVASF*GEDGDV
Trigger: CACGTCCCCATCCTCTCCCAAGAAGGAGGCGACCTC...GAATTCTATTTTCGGGAGATGTCTATTGCCGAGTAGAGTAATATATACCCAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000536630.5
ENST00000587152.6
CDS-3UTR CAA 90 bp CCCGCCCCCATAACCCCCTCTGCTATAGACATACTCTGGGTATATATTACTCTAGTTTTGCCTTCCTTTTaGGCGCTACAGTTGCTGCTG +
Preference number: 5 (lower is better)
Translates to: PAPITPSAIDILWVYITLVLPSF*ALQLLL
Trigger: CAGCAGCAACTGTAGCGCCAAAAAGGAAGGCAAAAC...TAGAGTAATATATACCCAGAGTATGTCTATAGCAGAGGGGGTTATGGGGGCGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000536630.5
ENST00000587152.6
CDS-3UTR CAA 90 bp AAACACCCCAAACCAAACACCAATGGATCCCCAAAGCGATGTGACTCCCTCTTCTGTCATCCAGACTCATaGCTGACCACAACCAAGGAA +
Preference number: 5 (lower is better)
Translates to: KHPKPNTNGSPKRCDSLFCHPDS*LTTTKE
Trigger: TTCCTTGGTTGTGGTCAGCAATGAGTCTGGATGACA...GAAGAGGGAGTCACATCGCTTTGGGGATCCATTGGTGTTTGGTTTGGGGTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536630.5
CDS-3UTR CAA 90 bp ACGTCGCCACCTTCCAAAAAGGTCACACACAGCACATACTTCGGTTTCTCATGTGCCAAGATTATGCCATaGCACTCCAGCCTTGACATC +
Preference number: 5 (lower is better)
Translates to: TSPPSKKVTHSTYFGFSCAKIMP*HSSLDI
Trigger: GATGTCAAGGCTGGAGTGCAATGGCATAATCTTGGC...ACATGAGAAACCGAAGTATGTGCTGTGTGTGACCTTTTTGGAAGGTGGCGACGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592853.5
CDS GCA 90 bp CCGAGAGCATGTGATCATTGGATTCATCCACTGCACACAGCAGGTTaGCTCCATTTTGGATGTTGTGGTGTTGTCAAACTGCTCTCCAAA +
Preference number: 5 (lower is better)
Translates to: PRACDHWIHPLHTAG*LHFGCCGVVKLLSK
Trigger: TTTGGAGAGCAGTTTGACAACACCACAACATCCAAAATGGAGGCAACCTGCTGTGTGCAGTGGATGAATCCAATGATCACATGCTCTCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586902.5
ENST00000590580.5
CDS-3UTR CAA 90 bp GCCCCCATAACCCCCTCTGCTATAGACATACTCTGGGTATATATTACTCTACTCACTGCACACAGCAGGTaGCCTCCATTAGATTTGGAG +
Preference number: 5 (lower is better)
Translates to: APITPSAIDILWVYITLLTAHSR*PPLDLE
Trigger: CTCCAAATCTAATGGAGGCAACCTGCTGTGTGCAGT...GAGTAGAGTAATATATACCCAGAGTATGTCTATAGCAGAGGGGGTTATGGGGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CAA 90 bp CCCCATAACCCCCTCTGCTATAGACATACTCTGGGTATATATTACTCTACTCGGACTGCACACAGCAGGTaGCCTCCATTAGATTTGGAG +
Preference number: 5 (lower is better)
Translates to: PHNPLCYRHTLGIYYSTRTAHSR*PPLDLE
Trigger: CTCCAAATCTAATGGAGGCAACCTGCTGTGTGCAGT...CCGAGTAGAGTAATATATACCCAGAGTATGTCTATAGCAGAGGGGGTTATGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CAA 90 bp CGCCACCTTCCAAAAAGGTCACACACAGCACATACTTCGGTTTCTCATGTTTCTACTGCACACAGCAGGTaGCCTCCATTAGATTTGGAG +
Preference number: 5 (lower is better)
Translates to: RHLPKRSHTAHTSVSHVSTAHSR*PPLDLE
Trigger: CTCCAAATCTAATGGAGGCAACCTGCTGTGTGCAGT...AGAAACATGAGAAACCGAAGTATGTGCTGTGTGTGACCTTTTTGGAAGGTGGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586195.5
ENST00000592853.5
CDS-3UTR CAA 90 bp CTTCCAAAAAGGTCACACACAGCACATACTTCGGTTTCTCATGTTTCTCAAAGATTGACATCCACCACCTaGGTCTCCTTGGCCCAGTCC +
Preference number: 5 (lower is better)
Translates to: LPKRSHTAHTSVSHVSQRLTSTT*VSLAQS
Trigger: GGACTGGGCCAAGGAGACCAAGGTGGTGGATGTCAA...TCTTTGAGAAACATGAGAAACCGAAGTATGTGCTGTGTGTGACCTTTTTGGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586195.5
ENST00000592853.5
CDS-3UTR CAA 90 bp CCCCATAACCCCCTCTGCTATAGACATACTCTGGGTATATATTACTCTACTCGGACCAATACAGCCTCATaGGAGCACTTGACATCCACC +
Preference number: 5 (lower is better)
Translates to: PHNPLCYRHTLGIYYSTRTNTAS*EHLTST
Trigger: GGTGGATGTCAAGTGCTCCAATGAGGCTGTATTGGT...CCGAGTAGAGTAATATATACCCAGAGTATGTCTATAGCAGAGGGGGTTATGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CAA 90 bp CCCCATAACCCCCTCTGCTATAGACATACTCTGGGTATATATTACTCTACTCGGACAAGAAGGCCACATTaGTCACATGGCTGCTGTGTC +
Preference number: 5 (lower is better)
Translates to: PHNPLCYRHTLGIYYSTRTRRPH*SHGCCV
Trigger: GACACAGCAGCCATGTGACAAATGTGGCCTTCTTGT...CCGAGTAGAGTAATATATACCCAGAGTATGTCTATAGCAGAGGGGGTTATGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CAA 90 bp ATGTCAGTCTACCCTCCCGCCCCCATAACCCCCTCTGCTATAGACATACTCTGGCTGAAGATAACTTCTTaGGTTTTGCCTTCCTTTTTG +
Preference number: 5 (lower is better)
Translates to: MSVYPPAPITPSAIDILWLKITS*VLPSFL
Trigger: CAAAAAGGAAGGCAAAACCAAAGAAGTTATCTTCAG...CCAGAGTATGTCTATAGCAGAGGGGGTTATGGGGGCGGGAGGGTAGACTGACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000536630.5
ENST00000587152.6
CDS-3UTR CAA 90 bp GCCCCCATAACCCCCTCTGCTATAGACATACTCTGGGTATATATTACTCTACTCCTCGTGCCCGACAAATaGTCATCCAGACTCATTGCT +
Preference number: 5 (lower is better)
Translates to: APITPSAIDILWVYITLLLVPDK*SSRLIA
Trigger: AGCAATGAGTCTGGATGACAATTTGTCGGGCACGAG...GAGTAGAGTAATATATACCCAGAGTATGTCTATAGCAGAGGGGGTTATGGGGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000536630.5
CDS-3UTR CAA 90 bp TCCAAAAAGGTCACACACAGCACATACTTCGGTTTCTCATGTTTCTCAAAGAGGCATTGCACTCCAGCCTaGACATCCACCACCTTGGTC +
Preference number: 5 (lower is better)
Translates to: SKKVTHSTYFGFSCFSKRHCTPA*TSTTLV
Trigger: GACCAAGGTGGTGGATGTCAAGGCTGGAGTGCAATG...CCTCTTTGAGAAACATGAGAAACCGAAGTATGTGCTGTGTGTGACCTTTTTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592853.5
CDS-3UTR CAA 90 bp TCTGCTATAGACATACTCTGGGTATATATTACTCTACTCGGCAATAGACATCTCTTGACATCCACCACCTaGGTCTCCTTGGCCCAGTCC +
Preference number: 5 (lower is better)
Translates to: SAIDILWVYITLLGNRHLLTSTT*VSLAQS
Trigger: GGACTGGGCCAAGGAGACCAAGGTGGTGGATGTCAA...GAGATGTCTATTGCCGAGTAGAGTAATATATACCCAGAGTATGTCTATAGCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CAA 90 bp AAACCAAACACCAATGGATCCCCAAAGCGATGTGACTCCCTCTTCCCACCCGGACTGAAGATAACTTCTTaGGTTTTGCCTTCCTTTTTG +
Preference number: 5 (lower is better)
Translates to: KPNTNGSPKRCDSLFPPGLKITS*VLPSFL
Trigger: CAAAAAGGAAGGCAAAACCAAAGAAGTTATCTTCAG...TCCGGGTGGGAAGAGGGAGTCACATCGCTTTGGGGATCCATTGGTGTTTGGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000536630.5
ENST00000587152.6
CDS-3UTR CAA 90 bp CCACCTTCCAAAAAGGTCACACACAGCACATACTTCGGTTTCTCATGTTTCTCAACCAATACAGCCTCATaGGAGCACTGTAGTCTCAGC +
Preference number: 5 (lower is better)
Translates to: PPSKKVTHSTYFGFSCFSTNTAS*EHCSLS
Trigger: GCTGAGACTACAGTGCTCCAATGAGGCTGTATTGGT...TGAGAAACATGAGAAACCGAAGTATGTGCTGTGTGTGACCTTTTTGGAAGGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592853.5
CDS-3UTR CAA 90 bp TCCAAAAAGGTCACACACAGCACATACTTCGGTTTCTCATGTTTCTCAAAGAGGTTGCCTCCATTAGATTaGGAGAAGCCCACACAGCAC +
Preference number: 5 (lower is better)
Translates to: SKKVTHSTYFGFSCFSKRLPPLD*EKPTQH
Trigger: GTGCTGTGTGGGCTTCTCCAAATCTAATGGAGGCAA...CCTCTTTGAGAAACATGAGAAACCGAAGTATGTGCTGTGTGTGACCTTTTTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586195.5
ENST00000592853.5
CDS-3UTR CAA 90 bp ATAGACATACTCTGGGTATATATTACTCTACTCGGCAATAGACATCTCCCGAAAGCCTCATTGGAGCACTaGACATCCACCACCTTGGTC +
Preference number: 5 (lower is better)
Translates to: IDILWVYITLLGNRHLPKASLEH*TSTTLV
Trigger: GACCAAGGTGGTGGATGTCAAGTGCTCCAATGAGGC...TTTCGGGAGATGTCTATTGCCGAGTAGAGTAATATATACCCAGAGTATGTCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CAA 90 bp TCTGCTATAGACATACTCTGGGTATATATTACTCTACTCGGCAATAGACATCTCTTTCTCAAAGAGGCCTaGCCGCTTGCTCAAGCTGCC +
Preference number: 5 (lower is better)
Translates to: SAIDILWVYITLLGNRHLFLKEA*PLAQAA
Trigger: GGCAGCTTGAGCAAGCGGCAAGGCCTCTTTGAGAAA...GAGATGTCTATTGCCGAGTAGAGTAATATATACCCAGAGTATGTCTATAGCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CAA 90 bp ACCCCCTCTGCTATAGACATACTCTGGGTATATATTACTCTACTCGGCAATAGAGACAAATTGTCATCGTaGCAGTATCGCAGCAGCGAG +
Preference number: 5 (lower is better)
Translates to: TPSAIDILWVYITLLGNRDKLSS*QYRSSE
Trigger: CTCGCTGCTGCGATACTGCAACGATGACAATTTGTC...TCTATTGCCGAGTAGAGTAATATATACCCAGAGTATGTCTATAGCAGAGGGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587152.6
CDS-3UTR CAA 90 bp CCCCATAACCCCCTCTGCTATAGACATACTCTGGGTATATATTACTCTACTCGGCTGAAGATAACTTCTTaGGTTTTGCCAGCTCCAAAG +
Preference number: 5 (lower is better)
Translates to: PHNPLCYRHTLGIYYSTRLKITS*VLPAPK
Trigger: CTTTGGAGCTGGCAAAACCAAAGAAGTTATCTTCAG...CCGAGTAGAGTAATATATACCCAGAGTATGTCTATAGCAGAGGGGGTTATGGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000245925.8
ENST00000586195.5
ENST00000588308.5
CDS-3UTR CAA 90 bp CCCTCTGCTATAGACATACTCTGGGTATATATTACTCTACTCGGCAATAGACATTTGCCTCCATTAGATTaGGAGAAGCCCACACAGCAC +
Preference number: 5 (lower is better)
Translates to: PSAIDILWVYITLLGNRHLPPLD*EKPTQH
Trigger: GTGCTGTGTGGGCTTCTCCAAATCTAATGGAGGCAA...ATGTCTATTGCCGAGTAGAGTAATATATACCCAGAGTATGTCTATAGCAGAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CAA 90 bp ATACTCTGGGTATATATTACTCTACTCGGCAATAGACATCTCCCGAAAATAGAAGCCTCATTGGAGCACTaGACATCCACCACCTTGGTC +
Preference number: 5 (lower is better)
Translates to: ILWVYITLLGNRHLPKIEASLEH*TSTTLV
Trigger: GACCAAGGTGGTGGATGTCAAGTGCTCCAATGAGGC...TTCTATTTTCGGGAGATGTCTATTGCCGAGTAGAGTAATATATACCCAGAGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CAA 90 bp CCCTCTGCTATAGACATACTCTGGGTATATATTACTCTACTCGGCAATAGACATACCAATACAGCCTCATaGGAGCACTTGACATCCACC +
Preference number: 5 (lower is better)
Translates to: PSAIDILWVYITLLGNRHTNTAS*EHLTST
Trigger: GGTGGATGTCAAGTGCTCCAATGAGGCTGTATTGGT...ATGTCTATTGCCGAGTAGAGTAATATATACCCAGAGTATGTCTATAGCAGAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CAA 90 bp TCTGCTATAGACATACTCTGGGTATATATTACTCTACTCGGCAATAGACATCTCTTGCCTCCATTAGATTaGGAGAAGCCCACACAGCAC +
Preference number: 5 (lower is better)
Translates to: SAIDILWVYITLLGNRHLLPPLD*EKPTQH
Trigger: GTGCTGTGTGGGCTTCTCCAAATCTAATGGAGGCAA...GAGATGTCTATTGCCGAGTAGAGTAATATATACCCAGAGTATGTCTATAGCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CAA 90 bp ATAGACATACTCTGGGTATATATTACTCTACTCGGCAATAGACATCTCCCGAAAACTGCACACAGCAGGTaGCCTCCATTAGATTTGGAG +
Preference number: 5 (lower is better)
Translates to: IDILWVYITLLGNRHLPKTAHSR*PPLDLE
Trigger: CTCCAAATCTAATGGAGGCAACCTGCTGTGTGCAGT...TTTCGGGAGATGTCTATTGCCGAGTAGAGTAATATATACCCAGAGTATGTCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CAA 90 bp TCTGCTATAGACATACTCTGGGTATATATTACTCTACTCGGCAATAGACATCTCACCAATACAGCCTCATaGGAGCACTTGACATCCACC +
Preference number: 5 (lower is better)
Translates to: SAIDILWVYITLLGNRHLTNTAS*EHLTST
Trigger: GGTGGATGTCAAGTGCTCCAATGAGGCTGTATTGGT...GAGATGTCTATTGCCGAGTAGAGTAATATATACCCAGAGTATGTCTATAGCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CAA 90 bp CTCTGGGTATATATTACTCTACTCGGCAATAGACATCTCCCGAAAATAGAATTCACAAGAAGGCCACATTaGTCACATGGCTGCTGTGTC +
Preference number: 5 (lower is better)
Translates to: LWVYITLLGNRHLPKIEFTRRPH*SHGCCV
Trigger: GACACAGCAGCCATGTGACAAATGTGGCCTTCTTGT...GAATTCTATTTTCGGGAGATGTCTATTGCCGAGTAGAGTAATATATACCCAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CAA 90 bp CTCTGGGTATATATTACTCTACTCGGCAATAGACATCTCCCGAAAATAGAATTCGTTTTGCCTTCCTTTTaGGCGCTACAGTTGCTGCTG +
Preference number: 5 (lower is better)
Translates to: LWVYITLLGNRHLPKIEFVLPSF*ALQLLL
Trigger: CAGCAGCAACTGTAGCGCCAAAAAGGAAGGCAAAAC...GAATTCTATTTTCGGGAGATGTCTATTGCCGAGTAGAGTAATATATACCCAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000536630.5
ENST00000587152.6
CDS-3UTR CAA 90 bp CCCCATAACCCCCTCTGCTATAGACATACTCTGGGTATATATTACTCTACTCGGATAACTTCTTTGGTTTaGCCTTCCTTTTTGGCGCTA +
Preference number: 5 (lower is better)
Translates to: PHNPLCYRHTLGIYYSTRITSLV*PSFLAL
Trigger: TAGCGCCAAAAAGGAAGGCAAAACCAAAGAAGTTAT...CCGAGTAGAGTAATATATACCCAGAGTATGTCTATAGCAGAGGGGGTTATGGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000536630.5
ENST00000587152.6
CDS-3UTR CAA 90 bp ATACTCTGGGTATATATTACTCTACTCGGCAATAGACATCTCCCGAAAATAGAAACAAGAAGGCCACATTaGTCACATGGCTGCTGTGTC +
Preference number: 5 (lower is better)
Translates to: ILWVYITLLGNRHLPKIETRRPH*SHGCCV
Trigger: GACACAGCAGCCATGTGACAAATGTGGCCTTCTTGT...TTCTATTTTCGGGAGATGTCTATTGCCGAGTAGAGTAATATATACCCAGAGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000245925.8
ENST00000536630.5
ENST00000586195.5
ENST00000587152.6
ENST00000588308.5
CDS-3UTR CAA 90 bp CCCTCTGCTATAGACATACTCTGGGTATATATTACTCTACTCGGCAATAGACATATAACTTCTTTGGTTTaGCCTTCCTTTTTGGCGCTA +
Preference number: 5 (lower is better)
Translates to: PSAIDILWVYITLLGNRHITSLV*PSFLAL
Trigger: TAGCGCCAAAAAGGAAGGCAAAACCAAAGAAGTTAT...ATGTCTATTGCCGAGTAGAGTAATATATACCCAGAGTATGTCTATAGCAGAGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000536630.5
ENST00000587152.6
CDS GCA 72 bp TGGTGCCTAAGCGCGGAGGCGCCCGGCCCTTGGGGGTaGCCCGCGCGCGTAGCGCCGCTCCCTGTTCTTCGC +
Preference number: 6 (lower is better)
Translates to: WCLSAEAPGPWG*PARVAPLPVLR
Trigger: GCGAAGAACAGGGAGCGGCGCTACGCGCGCGGGGCACCCCCAAGGGCCGGGCGCCTCCGCGCTTAGGCACCA
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000399594.7
ENST00000536630.5
ENST00000585386.1
ENST00000587152.6
ENST00000588172.1
ENST00000588420.1
ENST00000588889.5
ENST00000592901.1
CDS CCA 72 bp AGGCAGTGGTGCCTAAGCGCGGAGGCGCCCGGCCCTTaGGGGTGCCCCGCGCGCGTAGCGCCGCTCCCTGTT +
Preference number: 6 (lower is better)
Translates to: RQWCLSAEAPGP*GCPARVAPLPV
Trigger: AACAGGGAGCGGCGCTACGCGCGCGGGGCACCCCCAAGGGCCGGGCGCCTCCGCGCTTAGGCACCACTGCCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000399594.7
ENST00000536630.5
ENST00000585386.1
ENST00000587152.6
ENST00000588172.1
ENST00000588420.1
ENST00000588889.5
ENST00000592901.1
CDS TCA 72 bp GGGGTCCTCACGGCGCACCGAGGCGAGGCGCTCTGGTaGCAAGTAGCGGCGGACACTGCGCCCGGAGGTCGC +
Preference number: 6 (lower is better)
Translates to: GVLTAHRGEALW*QVAADTAPGGR
Trigger: GCGACCTCCGGGCGCAGTGTCCGCCGCTACTTGTCACCAGAGCGCCTCGCCTCGGTGCGCCGTGAGGACCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588889.5
CDS CCA 72 bp GCTGCGCCCGGAGGTCGCCTCCTTCTTGGGAGAGGATaGGGACGTGGCATAGCCACCCACGCGCCGCGGGGG +
Preference number: 6 (lower is better)
Translates to: AAPGGRLLLGRG*GRGIATHAPRG
Trigger: CCCCCGCGGCGCGTGGGTGGCTATGCCACGTCCCCATCCTCTCCCAAGAAGGAGGCGACCTCCGGGCGCAGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000399594.7
ENST00000536630.5
ENST00000587152.6
ENST00000588172.1
ENST00000592901.1
CDS CCA 72 bp CCTGCGCCCGGAGGTCGCCTCCTTCTTGGGAGAGGATaGGGACGTGGCATAGCCACCCACGCGCCGCGGGGG +
Preference number: 6 (lower is better)
Translates to: PAPGGRLLLGRG*GRGIATHAPRG
Trigger: CCCCCGCGGCGCGTGGGTGGCTATGCCACGTCCCCATCCTCTCCCAAGAAGGAGGCGACCTCCGGGCGCAGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585386.1
ENST00000588420.1
CDS TCA 72 bp GGGGTCCTCACGGCGCACCGAGGCGAGGCGCTCTGGTaGCAAGTAGCGGCGGACACTGCTGCGCCCGGAGGT +
Preference number: 6 (lower is better)
Translates to: GVLTAHRGEALW*QVAADTAAPGG
Trigger: ACCTCCGGGCGCAGCAGTGTCCGCCGCTACTTGTCACCAGAGCGCCTCGCCTCGGTGCGCCGTGAGGACCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399594.7
ENST00000536630.5
ENST00000587152.6
ENST00000588172.1
ENST00000592901.1
CDS CCA 72 bp CGGAGGTCGCCTCCTTCTTGGGAGAGGATGGGGACGTaGCATAGCCACCCACGCGCCGCGGGGGTCCCGAGC +
Preference number: 6 (lower is better)
Translates to: RRSPPSWERMGT*HSHPRAAGVPS
Trigger: GCTCGGGACCCCCGCGGCGCGTGGGTGGCTATGCCACGTCCCCATCCTCTCCCAAGAAGGAGGCGACCTCCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000399594.7
ENST00000536630.5
ENST00000585386.1
ENST00000587152.6
ENST00000588172.1
ENST00000588420.1
ENST00000588889.5
ENST00000592901.1
CDS CCA 72 bp ACTGCGCCCGGAGGTCGCCTCCTTCTTGGGAGAGGATaGGGACGTGGCATAGCCACCCACGCGCCGCGGGGG +
Preference number: 6 (lower is better)
Translates to: TAPGGRLLLGRG*GRGIATHAPRG
Trigger: CCCCCGCGGCGCGTGGGTGGCTATGCCACGTCCCCATCCTCTCCCAAGAAGGAGGCGACCTCCGGGCGCAGT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588889.5
CDS CCA 72 bp GGCGGACACTGCTGCGCCCGGAGGTCGCCTCCTTCTTaGGAGAGGATGGGGACGTGGCATAGCCACCCACGC +
Preference number: 6 (lower is better)
Translates to: GGHCCARRSPPS*ERMGTWHSHPR
Trigger: GCGTGGGTGGCTATGCCACGTCCCCATCCTCTCCCAAGAAGGAGGCGACCTCCGGGCGCAGCAGTGTCCGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000399594.7
ENST00000536630.5
ENST00000587152.6
ENST00000588172.1
ENST00000592901.1
CDS CCA 72 bp AGCGGCGGACACTGCGCCCGGAGGTCGCCTCCTTCTTaGGAGAGGATGGGGACGTGGCATAGCCACCCACGC +
Preference number: 6 (lower is better)
Translates to: SGGHCARRSPPS*ERMGTWHSHPR
Trigger: GCGTGGGTGGCTATGCCACGTCCCCATCCTCTCCCAAGAAGGAGGCGACCTCCGGGCGCAGTGTCCGCCGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588889.5
CDS TCA 72 bp GGCCACGAGGGGTCGAAAGAGCACCCGGATGCCCGATaGAAGGGCCGCTTCCGCAGCGCTGGGCCACTTTCC +
Preference number: 6 (lower is better)
Translates to: GHEGSKEHPDAR*KGRFRSAGPLS
Trigger: GGAAAGTGGCCCAGCGCTGCGGAAGCGGCCCTTTCATCGGGCATCCGGGTGCTCTTTCGACCCCTCGTGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589876.5
CDS GCA 72 bp CAAGACTGGCCACGAGGGGTCGAAAGAGCACCCGGATaGCCGATGAAAGGGCCGCTTCCGCAGCGCTGGGCC +
Preference number: 6 (lower is better)
Translates to: QDWPRGVERAPG*PMKGPLPQRWA
Trigger: GGCCCAGCGCTGCGGAAGCGGCCCTTTCATCGGGCATCCGGGTGCTCTTTCGACCCCTCGTGGCCAGTCTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589876.5
CDS CAA 90 bp CCTCTGTCTCCCACGAGGTCTTGGAAGAGGCTGGGGGTCCCGGCCTaGTGCCTTACCTGCGCCCGGAGGTCGCCTCCTTCTTGGGAGAGG +
Preference number: 6 (lower is better)
Translates to: PLSPTRSWKRLGVPA*CLTCARRSPPSWER
Trigger: CCTCTCCCAAGAAGGAGGCGACCTCCGGGCGCAGGTAAGGCACAAGGCCGGGACCCCCAGCCTCTTCCAAGACCTCGTGGGAGACAGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000585386.1
ENST00000588420.1
CDS TCA 72 bp ACACGCCGCCGTCGTGGGCGCCCAGCACCGCCTGTGTaGTACGGTTCCCACCTCAAAGAGGCCTTGCCGCTT +
Preference number: 6 (lower is better)
Translates to: TRRRRGRPAPPV*YGSHLKEALPL
Trigger: AAGCGGCAAGGCCTCTTTGAGGTGGGAACCGTATCACACAGGCGGTGCTGGGCGCCCACGACGGCGGCGTGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588610.5
CDS GCA 72 bp TGGAAGAGGCTGGGGGTCCCGGCCTTGTGCCTTACCTaGGCCCGGAGGTCGCCTCCTTCTTGGGAGAGGATG +
Preference number: 6 (lower is better)
Translates to: WKRLGVPALCLT*ARRSPPSWERM
Trigger: CATCCTCTCCCAAGAAGGAGGCGACCTCCGGGCGCAGGTAAGGCACAAGGCCGGGACCCCCAGCCTCTTCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000585386.1
ENST00000588420.1
CDS GCA 72 bp ACGAGGTCTTGGAAGAGGCTGGGGGTCCCGGCCTTGTaGCTTACCTGCGCCCGGAGGTCGCCTCCTTCTTGG +
Preference number: 6 (lower is better)
Translates to: TRSWKRLGVPAL*LTCARRSPPSW
Trigger: CCAAGAAGGAGGCGACCTCCGGGCGCAGGTAAGGCACAAGGCCGGGACCCCCAGCCTCTTCCAAGACCTCGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000585386.1
ENST00000588420.1
CDS GCA 72 bp CGTGCCCGACAAATTGTCATCTGGAAGACGGGGGAGTaGCGGCTGCAGGGCCACCCAGGAGCTCCAGTGCCC +
Preference number: 6 (lower is better)
Translates to: RARQIVIWKTGE*RLQGHPGAPVP
Trigger: GGGCACTGGAGCTCCTGGGTGGCCCTGCAGCCGGCACTCCCCCGTCTTCCAGATGACAATTTGTCGGGCACG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000588420.1
CDS CCA 72 bp GGAAGTAAAGGTGGTAGCTTAGACGGGGACAGGGCGTaGAGCTCGCCCCTGCCATCCCGCGTCCACAGGCCG +
Preference number: 6 (lower is better)
Translates to: GSKGGSLDGDRA*SSPLPSRVHRP
Trigger: CGGCCTGTGGACGCGGGATGGCAGGGGCGAGCTCCACGCCCTGTCCCCGTCTAAGCTACCACCTTTACTTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000536630.5
CDS CCA 72 bp CCCGGATGCCCGATGAAAGGGCCGCTTCCGCAGCGCTaGGCCACTTTCCCAGAACTCGAGGCTGACAGCAGG +
Preference number: 6 (lower is better)
Translates to: PGCPMKGPLPQR*ATFPELEADSR
Trigger: CCTGCTGTCAGCCTCGAGTTCTGGGAAAGTGGCCCAGCGCTGCGGAAGCGGCCCTTTCATCGGGCATCCGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589876.5
CDS CAA 90 bp GCCGACACGCGGTCGTCCACTTCCATACCGCTCGTGCCCGACAAATaGTCATCTGGAAGACGGGGGAGTGCCGGCTGCAGGGCCACCCAG +
Preference number: 6 (lower is better)
Translates to: ADTRSSTSIPLVPDK*SSGRRGSAGCRATQ
Trigger: CTGGGTGGCCCTGCAGCCGGCACTCCCCCGTCTTCCAGATGACAATTTGTCGGGCACGAGCGGTATGGAAGTGGACGACCGCGTGTCGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000588420.1
CDS TCA 72 bp GGGGTCCTCACGGCGCACCGAGGCGAGGCGCTCTGGTaGCAAGTAGCGGCGGACACTGCTAAAAGAGAGCAC +
Preference number: 6 (lower is better)
Translates to: GVLTAHRGEALW*QVAADTAKREH
Trigger: GTGCTCTCTTTTAGCAGTGTCCGCCGCTACTTGTCACCAGAGCGCCTCGCCTCGGTGCGCCGTGAGGACCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585386.1
ENST00000588420.1
CDS GCA 72 bp ACTGAGTCCCAGATGCGCACGTGGGGCGGCAGCGGCTaGAGGGAAGAGAGGCTTGTTACCTTGGGGGTGCCA +
Preference number: 6 (lower is better)
Translates to: TESQMRTWGGSG*REERLVTLGVP
Trigger: TGGCACCCCCAAGGTAACAAGCCTCTCTTCCCTGCAGCCGCTGCCGCCCCACGTGCGCATCTGGGACTCAGT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587804.1
CDS CCA 72 bp TTGTGCCTTACCTGCGCCCGGAGGTCGCCTCCTTCTTaGGAGAGGATGGGGACGTGGCATAGCCACCCACGC +
Preference number: 6 (lower is better)
Translates to: LCLTCARRSPPS*ERMGTWHSHPR
Trigger: GCGTGGGTGGCTATGCCACGTCCCCATCCTCTCCCAAGAAGGAGGCGACCTCCGGGCGCAGGTAAGGCACAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585386.1
ENST00000588420.1
CDS GCA 72 bp AGGACCGCCAGCTCGTCTTCCTGTAACTGCAGCCGCTaGTCCAGCGCCGACACGCGGTCGTCCACTTCCATA +
Preference number: 6 (lower is better)
Translates to: RTASSSSCNCSR*SSADTRSSTSI
Trigger: TATGGAAGTGGACGACCGCGTGTCGGCGCTGGAGCAGCGGCTGCAGTTACAGGAAGACGAGCTGGCGGTCCT
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000399594.7
ENST00000536630.5
ENST00000585386.1
ENST00000587152.6
ENST00000588172.1
ENST00000588420.1
ENST00000588889.5
ENST00000592901.1
CDS GCA 72 bp GCGGCTGCAGGGAAGAGAGGCTTGTTACCTTGGGGGTaGCAGCTGCTTGTCCCCCACAACTGCGTCCTGCAC +
Preference number: 6 (lower is better)
Translates to: AAAGKRGLLPWG*QLLVPHNCVLH
Trigger: GTGCAGGACGCAGTTGTGGGGGACAAGCAGCTGGCACCCCCAAGGTAACAAGCCTCTCTTCCCTGCAGCCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000587804.1
CDS GCA 72 bp CCCGTCTCCAGGGACAGCTCGAGTTCCCAGAGGAACTaGGGCTCAGAGGAGGGGAACCACAGCCACTGTGAG +
Preference number: 6 (lower is better)
Translates to: PVSRDSSSSQRN*GSEEGNHSHCE
Trigger: CTCACAGTGGCTGTGGTTCCCCTCCTCTGAGCCGCAGTTCCTCTGGGAACTCGAGCTGTCCCTGGAGACGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589876.5
CDS TCA 72 bp AGTCTCGGCCACGGTAGCCATAGACCCACTCCAGCTTaGGCCGGCAAGAAGGCAGCTCCGAGCGTGTGTCCA +
Preference number: 6 (lower is better)
Translates to: SLGHGSHRPTPA*AGKKAAPSVCP
Trigger: TGGACACACGCTCGGAGCTGCCTTCTTGCCGGCTCAAGCTGGAGTGGGTCTATGGCTACCGTGGCCGAGACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000245925.8
ENST00000399594.7
ENST00000536630.5
ENST00000586770.5
ENST00000587152.6
ENST00000588000.5
ENST00000588308.5
ENST00000588610.5
ENST00000588889.5
ENST00000589876.5
ENST00000590018.1
ENST00000590043.5
ENST00000591721.5
ENST00000593255.5
CDS TCA 72 bp CCATCCTCTGCCAGGACACCCCCAGAGGTCAGGCACTaGCACCAGCCCCATCCCTATTCCCTCTCCTCTTCC +
Preference number: 6 (lower is better)
Translates to: PSSARTPPEVRH*HQPHPYSLSSS
Trigger: GGAAGAGGAGAGGGAATAGGGATGGGGCTGGTGTCAGTGCCTGACCTCTGGGGGTGTCCTGGCAGAGGATGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590018.1
CDS GCA 72 bp GCGCCGACACGCGGTCGTCCACTTCCATACCGCTCGTaGCCGACAAATTGTCATCTGAGCCCGACACCCACA +
Preference number: 6 (lower is better)
Translates to: APTRGRPLPYRS*PTNCHLSPTPT
Trigger: TGTGGGTGTCGGGCTCAGATGACAATTTGTCGGGCACGAGCGGTATGGAAGTGGACGACCGCGTGTCGGCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399594.7
CDS GCA 72 bp GGGGCAGAGCGCTGCCTCTCTGCAGGCCGTGTGCTTTaGTCGGTTGATCTTGCAGAGCCTAAGACACAGGCC +
Preference number: 6 (lower is better)
Translates to: GAERCLSAGRVL*SVDLAEPKTQA
Trigger: GGCCTGTGTCTTAGGCTCTGCAAGATCAACCGAGCAAAGCACACGGCCTGCAGAGAGGCAGCGCTCTGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586770.5
CDS GCA 72 bp GCGCCGACACGCGGTCGTCCACTTCCATACCGCTCGTaGCCGACAAATTGTCATCTGGGGCTGGGACACTTG +
Preference number: 6 (lower is better)
Translates to: APTRGRPLPYRS*PTNCHLGLGHL
Trigger: CAAGTGTCCCAGCCCCAGATGACAATTTGTCGGGCACGAGCGGTATGGAAGTGGACGACCGCGTGTCGGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588172.1
CDS GCA 72 bp GCGCCGACACGCGGTCGTCCACTTCCATACCGCTCGTaGCCGACAAATTGTCATCTGGAAGACGGGGGAGTG +
Preference number: 6 (lower is better)
Translates to: APTRGRPLPYRS*PTNCHLEDGGV
Trigger: CACTCCCCCGTCTTCCAGATGACAATTTGTCGGGCACGAGCGGTATGGAAGTGGACGACCGCGTGTCGGCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000588420.1
ENST00000588889.5
CDS CCA 72 bp GGCTGTAGGTGGGTGCCAGCTCGTCTGGGATCATCATaGGCACAGGGCGGCCCCTCAGGAACATTTTCACGG +
Preference number: 6 (lower is better)
Translates to: GCRWVPARLGSS*AQGGPSGTFSR
Trigger: CCGTGAAAATGTTCCTGAGGGGCCGCCCTGTGCCCATGATGATCCCAGACGAGCTGGCACCCACCTACAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000245925.8
ENST00000399594.7
ENST00000536630.5
ENST00000586770.5
ENST00000587152.6
ENST00000588000.5
ENST00000588308.5
ENST00000588610.5
ENST00000588889.5
ENST00000589876.5
ENST00000590018.1
ENST00000590043.5
ENST00000591721.5
ENST00000593255.5
CDS CCA 72 bp AAGGTGGAGAGGGAAACTGAGTCCCAGATGCGCACGTaGGGCGGCAGCGGCTTCCCTTCCTTAGTGGTTCCC +
Preference number: 6 (lower is better)
Translates to: KVERETESQMRT*GGSGFPSLVVP
Trigger: GGGAACCACTAAGGAAGGGAAGCCGCTGCCGCCCCACGTGCGCATCTGGGACTCAGTTTCCCTCTCCACCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000245925.8
ENST00000399594.7
ENST00000536630.5
ENST00000586195.5
ENST00000586770.5
ENST00000587152.6
ENST00000588000.5
ENST00000588308.5
ENST00000588496.5
ENST00000588610.5
ENST00000588889.5
ENST00000589876.5
ENST00000591721.5
ENST00000593255.5
CDS CCA 72 bp GTCCTTACCCTTCCTTTTTGGCGCTACAGTTGCTGCTaGAGGATGTGGTCCGGCTGCGGGGGTCCTCACGGC +
Preference number: 6 (lower is better)
Translates to: VLTLPFWRYSCC*RMWSGCGGPHG
Trigger: GCCGTGAGGACCCCCGCAGCCGGACCACATCCTCCAGCAGCAACTGTAGCGCCAAAAAGGAAGGGTAAGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000585386.1
ENST00000588420.1
CDS CCA 72 bp GAATACCTTCGAGGCCTCCAAGTTGGCTGCACCTCTTaGCATTTGACCACGCCCCTACGGCCCCGCCCAACC +
Preference number: 6 (lower is better)
Translates to: EYLRGLQVGCTS*HLTTPLRPRPT
Trigger: GGTTGGGCGGGGCCGTAGGGGCGTGGTCAAATGCCAAGAGGTGCAGCCAACTTGGAGGCCTCGAAGGTATTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585386.1
ENST00000588420.1
CDS CAA 72 bp CGGTCGTCCACTTCCATACCGCTCGTGCCCGACAAATaGTCATCTGGAAGACGGGGGAGTGCCGGCTGCAGG +
Preference number: 6 (lower is better)
Translates to: RSSTSIPLVPDK*SSGRRGSAGCR
Trigger: CCTGCAGCCGGCACTCCCCCGTCTTCCAGATGACAATTTGTCGGGCACGAGCGGTATGGAAGTGGACGACCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000588420.1
ENST00000588889.5
CDS GCA 72 bp GGGACAACCTGTAGGGACACTCACCAACCTGAAGGGTaGCACCCCCAATCAGAGTGGCAGGAGGCAGCACAG +
Preference number: 6 (lower is better)
Translates to: GTTCRDTHQPEG*HPQSEWQEAAQ
Trigger: CTGTGCTGCCTCCTGCCACTCTGATTGGGGGTGGCACCCTTCAGGTTGGTGAGTGTCCCTACAGGTTGTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000588000.5
CDS GCA 72 bp CCAGTCCTTACCCTTCCTTTTTGGCGCTACAGTTGCTaGTGGAGGATGTGGTCCGGCTGCGGGGGTCCTCAC +
Preference number: 6 (lower is better)
Translates to: PVLTLPFWRYSC*WRMWSGCGGPH
Trigger: GTGAGGACCCCCGCAGCCGGACCACATCCTCCAGCAGCAACTGTAGCGCCAAAAAGGAAGGGTAAGGACTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000585386.1
ENST00000588420.1
CDS CCA 72 bp AGAGTGGCAGGAGGCAGCACAGTTGGAGCAGGGGCCTaGGGCCCCTCTGCTGTGCTTGGAGTTAAACTCTTG +
Preference number: 6 (lower is better)
Translates to: RVAGGSTVGAGA*GPSAVLGVKLL
Trigger: CAAGAGTTTAACTCCAAGCACAGCAGAGGGGCCCCAGGCCCCTGCTCCAACTGTGCTGCCTCCTGCCACTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588000.5
CDS CCA 72 bp CAGGCAAACAAACCACCTCTGTCTCCCACGAGGTCTTaGAAGAGGCTGGGGGTCCCGGCCTTGTGCCTTACC +
Preference number: 6 (lower is better)
Translates to: QANKPPLSPTRS*KRLGVPALCLT
Trigger: GGTAAGGCACAAGGCCGGGACCCCCAGCCTCTTCCAAGACCTCGTGGGAGACAGAGGTGGTTTGTTTGCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000585386.1
ENST00000588420.1
CDS CCA 72 bp GTGACAAAGCAGCTGCTGTCCTGGGCCCAATCCAGGTaGGTGATAAAACTGGAATGGCCCTGCGGGGGAGGG +
Preference number: 6 (lower is better)
Translates to: VTKQLLSWAQSR*VIKLEWPCGGG
Trigger: CCCTCCCCCGCAGGGCCATTCCAGTTTTATCACCCACCTGGATTGGGCCCAGGACAGCAGCTGCTTTGTCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592433.5
CDS CAA 90 bp AAGGGGCAGAGCGCTGCCTCTCTGCAGGCCGTGTGCTTTGCTCGGTaGATCTTGCAGAGCCTAAGACACAGGCCCAGAGAGGCAGTGATC +
Preference number: 6 (lower is better)
Translates to: KGQSAASLQAVCFAR*ILQSLRHRPREAVI
Trigger: GATCACTGCCTCTCTGGGCCTGTGTCTTAGGCTCTGCAAGATCAACCGAGCAAAGCACACGGCCTGCAGAGAGGCAGCGCTCTGCCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586770.5
CDS CAA 90 bp TGTGAATACCTTCGAGGCCTCCAAGTTGGCTGCACCTCTTGGCATTaGACCACGCCCCTACGGCCCCGCCCAACCTTTAAGCCACGCCCT +
Preference number: 6 (lower is better)
Translates to: CEYLRGLQVGCTSWH*TTPLRPRPTFKPRP
Trigger: AGGGCGTGGCTTAAAGGTTGGGCGGGGCCGTAGGGGCGTGGTCAAATGCCAAGAGGTGCAGCCAACTTGGAGGCCTCGAAGGTATTCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585386.1
ENST00000588420.1
CDS GCA 72 bp GCGCCGACACGCGGTCGTCCACTTCCATACCGCTCGTaGCCGACAAATTGTCATCCAGACTCATTGCTGACC +
Preference number: 6 (lower is better)
Translates to: APTRGRPLPYRS*PTNCHPDSLLT
Trigger: GGTCAGCAATGAGTCTGGATGACAATTTGTCGGGCACGAGCGGTATGGAAGTGGACGACCGCGTGTCGGCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536630.5
CDS GCA 72 bp GCGCCGACACGCGGTCGTCCACTTCCATACCGCTCGTaGCCGACAAATTGTCATCGTTGCAGTATCGCAGCA +
Preference number: 6 (lower is better)
Translates to: APTRGRPLPYRS*PTNCHRCSIAA
Trigger: TGCTGCGATACTGCAACGATGACAATTTGTCGGGCACGAGCGGTATGGAAGTGGACGACCGCGTGTCGGCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000585386.1
ENST00000587152.6
ENST00000592901.1
CDS TCA 72 bp AGGCCAGAGAGGCAAAGACCCAGTAGCCAAGACTCCTaGCCTCTGGCTCCAGCCTGTCACCCCAACAAGCAA +
Preference number: 6 (lower is better)
Translates to: RPERQRPSSQDS*PLAPACHPNKQ
Trigger: TTGCTTGTTGGGGTGACAGGCTGGAGCCAGAGGTCAGGAGTCTTGGCTACTGGGTCTTTGCCTCTCTGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590018.1
CDS GCA 72 bp AGTGCCGTGAGCAAGCGAGATTCTCCCTGCACCCTCTaGTGCTGGAGCTCAGGCAAACAAACCACCTCTGTC +
Preference number: 6 (lower is better)
Translates to: SAVSKRDSPCTL*CWSSGKQTTSV
Trigger: GACAGAGGTGGTTTGTTTGCCTGAGCTCCAGCAGCAGAGGGTGCAGGGAGAATCTCGCTTGCTCACGGCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585386.1
ENST00000588420.1
CDS GCA 72 bp ATTGACTCCGCCCTCCCAGACCTTCCACTGTTACCGTaGCACCTCAAGATTGGTCCCTCCAAGGCTCTGGCA +
Preference number: 6 (lower is better)
Translates to: IDSALPDLPLLP*HLKIGPSKALA
Trigger: TGCCAGAGCCTTGGAGGGACCAATCTTGAGGTGGCACGGTAACAGTGGAAGGTCTGGGAGGGCGGAGTCAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585386.1
ENST00000588420.1
CDS CCA 72 bp TATCTCTGCCTGGACATGCCAAAACCCGCCTGCAAATaGGCAAGGACCAGCTGGGCCCTAGGCACTGGGTTT +
Preference number: 6 (lower is better)
Translates to: YLCLDMPKPACK*ARTSWALGTGF
Trigger: AAACCCAGTGCCTAGGGCCCAGCTGGTCCTTGCCCATTTGCAGGCGGGTTTTGGCATGTCCAGGCAGAGATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586902.5
ENST00000590580.5
CDS CCA 72 bp TTCCCGCAGGTGATAAGCACAGTGGGGTCCGTGGGGTaGAAGGTGGCCACCAATACAGCCTCATTGGAGCAA +
Preference number: 6 (lower is better)
Translates to: FPQVISTVGSVG*KVATNTASLEQ
Trigger: TTGCTCCAATGAGGCTGTATTGGTGGCCACCTTCCACCCCACGGACCCCACTGTGCTTATCACCTGCGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588496.5
CDS TCA 72 bp AACCCTGTCCCTGAGTTGACTCAGTTGCTTGAGAATTaGCTGCTACCTCCCGCCAACGCTCCTTCTCCGGCC +
Preference number: 6 (lower is better)
Translates to: NPVPELTQLLEN*LLPPANAPSPA
Trigger: GGCCGGAGAAGGAGCGTTGGCGGGAGGTAGCAGTCAATTCTCAAGCAACTGAGTCAACTCAGGGACAGGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588420.1
CDS GCA 72 bp TCCTTATGTGAATACCTTCGAGGCCTCCAAGTTGGCTaGACCTCTTGGCATTTGACCACGCCCCTACGGCCC +
Preference number: 6 (lower is better)
Translates to: SLCEYLRGLQVG*TSWHLTTPLRP
Trigger: GGGCCGTAGGGGCGTGGTCAAATGCCAAGAGGTGCAGCCAACTTGGAGGCCTCGAAGGTATTCACATAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585386.1
ENST00000588420.1
CDS GCA 72 bp TGTACTTATCTCTGCCTGGACATGCCAAAACCCGCCTaGAAATGGGCAAGGACCAGCTGGGCCCTAGGCACT +
Preference number: 6 (lower is better)
Translates to: CTYLCLDMPKPA*KWARTSWALGT
Trigger: AGTGCCTAGGGCCCAGCTGGTCCTTGCCCATTTGCAGGCGGGTTTTGGCATGTCCAGGCAGAGATAAGTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586902.5
ENST00000590580.5
CDS CCA 72 bp GCCACCTGTCCCGTGGCGATGGTGACCATATCTGGGTaGATGGCCAAGCATTTGATGTCATCGTTGTGTCCC +
Preference number: 6 (lower is better)
Translates to: ATCPVAMVTISG*MAKHLMSSLCP
Trigger: GGGACACAACGATGACATCAAATGCTTGGCCATCCACCCAGATATGGTCACCATCGCCACGGGACAGGTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000245925.8
ENST00000399594.7
ENST00000536630.5
ENST00000586770.5
ENST00000587152.6
ENST00000587804.1
ENST00000588000.5
ENST00000588308.5
ENST00000588610.5
ENST00000588889.5
ENST00000589876.5
ENST00000590043.5
ENST00000591721.5
ENST00000593255.5
CDS CCA 72 bp TCCCGCCACCTGTCCCGTGGCGATGGTGACCATATCTaGGTGGATGGCCAAGCATTTGATGTCATCGTTGTG +
Preference number: 6 (lower is better)
Translates to: SRHLSRGDGDHI*VDGQAFDVIVV
Trigger: CACAACGATGACATCAAATGCTTGGCCATCCACCCAGATATGGTCACCATCGCCACGGGACAGGTGGCGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000245925.8
ENST00000399594.7
ENST00000536630.5
ENST00000586770.5
ENST00000587152.6
ENST00000587804.1
ENST00000588000.5
ENST00000588308.5
ENST00000588610.5
ENST00000588889.5
ENST00000589876.5
ENST00000590043.5
ENST00000591721.5
ENST00000593255.5
CDS CCA 72 bp GCAGCCATCTCGATGATCCTGCTCCACAGGGGCTGGTaGGAATCTGAGCTCCATAGATGCACCAGCTTATCC +
Preference number: 6 (lower is better)
Translates to: AAISMILLHRGW*ESELHRCTSLS
Trigger: GGATAAGCTGGTGCATCTATGGAGCTCAGATTCCCACCAGCCCCTGTGGAGCAGGATCATCGAGATGGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588308.5
CDS CCA 72 bp TCCCGCCACCTGTCCCGTGGCGATGGTGACCATATCTaGGTGGATGGCCAAGCCACACTGAAGATAACTTCT +
Preference number: 6 (lower is better)
Translates to: SRHLSRGDGDHI*VDGQATLKITS
Trigger: AGAAGTTATCTTCAGTGTGGCTTGGCCATCCACCCAGATATGGTCACCATCGCCACGGGACAGGTGGCGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586195.5
CDS CCA 72 bp TCTGTAATCCCAGGAGGCAGCATGAGCCACAGCATCTaGCTGGATCACCTGAGGTCAGGAGTTCGAGACCAG +
Preference number: 6 (lower is better)
Translates to: SVIPGGSMSHSI*LDHLRSGVRDQ
Trigger: CTGGTCTCGAACTCCTGACCTCAGGTGATCCAGCCAGATGCTGTGGCTCATGCTGCCTCCTGGGATTACAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586405.1
CDS CCA 72 bp ACTTTCTTGGCACATTTTTCCATGCAGGTCCAAGACTaGCCACGAGGGGTCGAAAGAGCACCCGGATGCCCG +
Preference number: 6 (lower is better)
Translates to: TFLAHFSMQVQD*PRGVERAPGCP
Trigger: CGGGCATCCGGGTGCTCTTTCGACCCCTCGTGGCCAGTCTTGGACCTGCATGGAAAAATGTGCCAAGAAAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589876.5
CDS TCA 72 bp TTCTCGACCATTTCCTCCCTATCTCTTTCTGCGGCTTaGCGCCGCCCCAGTCCTTACCCTTCCTTTTTGGCG +
Preference number: 6 (lower is better)
Translates to: FSTISSLSLSAA*RRPSPYPSFLA
Trigger: CGCCAAAAAGGAAGGGTAAGGACTGGGGCGGCGTCAAGCCGCAGAAAGAGATAGGGAGGAAATGGTCGAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000585386.1
ENST00000588420.1
CDS GCA 72 bp TTCCCACCTCAAAGAGGCCTTGCCGCTTGCTCAAGCTaGCCCCCTCCAAGGTCCAGAAGTAGATGTGAGATT +
Preference number: 6 (lower is better)
Translates to: FPPQRGLAACSS*PPPRSRSRCEI
Trigger: AATCTCACATCTACTTCTGGACCTTGGAGGGGGGCAGCTTGAGCAAGCGGCAAGGCCTCTTTGAGGTGGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000588610.5
CDS CCA 72 bp AACACAAGGGGACTAAAGGAAGGATACACAGGCCTTTaGAGTATGGGGGCAGGGCCAGAATACTGTGGGCGG +
Preference number: 6 (lower is better)
Translates to: NTRGLKEGYTGL*SMGAGPEYCGR
Trigger: CCGCCCACAGTATTCTGGCCCTGCCCCCATACTCCAAAGGCCTGTGTATCCTTCCTTTAGTCCCCTTGTGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592433.5
CDS CAA 72 bp TCTGTCCAGATCTTCAGTATGGCCCCGCCTCTGGAGTaGACCACGCCTGTCATTCTGAGCCTCCCTTCTAAC +
Preference number: 6 (lower is better)
Translates to: SVQIFSMAPPLE*TTPVILSLPSN
Trigger: GTTAGAAGGGAGGCTCAGAATGACAGGCGTGGTCAACTCCAGAGGCGGGGCCATACTGAAGATCTGGACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588420.1
CDS CAA 90 bp GTTTTTGACTCTGTCCAGATCTTCAGTATGGCCCCGCCTCTGGAGTaGACCACGCCTGTCATTCTGAGCCTCCCTTCTAACCCTGTCCCT +
Preference number: 6 (lower is better)
Translates to: VFDSVQIFSMAPPLE*TTPVILSLPSNPVP
Trigger: AGGGACAGGGTTAGAAGGGAGGCTCAGAATGACAGGCGTGGTCAACTCCAGAGGCGGGGCCATACTGAAGATCTGGACAGAGTCAAAAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588420.1
CDS TCA 72 bp CCCGCCAACGCTCCTTCTCCGGCCCGCCAGGCATTCTaGTTACGTCCATTTTCACGTATTCCTTATGTGAAT +
Preference number: 6 (lower is better)
Translates to: PANAPSPARQAF*LRPFSRIPYVN
Trigger: ATTCACATAAGGAATACGTGAAAATGGACGTAATCAGAATGCCTGGCGGGCCGGAGAAGGAGCGTTGGCGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585386.1
ENST00000588420.1
CDS GCA 72 bp ACTACATTTCTCGACCATTTCCTCCCTATCTCTTTCTaGGGCTTGACGCCGCCCCAGTCCTTACCCTTCCTT +
Preference number: 6 (lower is better)
Translates to: TTFLDHFLPISF*GLTPPQSLPFL
Trigger: AAGGAAGGGTAAGGACTGGGGCGGCGTCAAGCCGCAGAAAGAGATAGGGAGGAAATGGTCGAGAAATGTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585386.1
ENST00000588420.1
CDS CCA 72 bp AAGACCTTTCCCAGTATGTCTGAAGGGGGCCTCAATTaGGCATCTGAACCCATGCCCTGGTGTGTGACTCAA +
Preference number: 6 (lower is better)
Translates to: KTFPSMSEGGLN*ASEPMPWCVTQ
Trigger: TTGAGTCACACACCAGGGCATGGGTTCAGATGCCCAATTGAGGCCCCCTTCAGACATACTGGGAAAGGTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592482.5
CDS CAA 72 bp TCCCTCTTTCCTTGTAGAAACTCTGTGGCTGCTGCCTaGACTTCATCCCTGAAACTCAACGGGGCCTCTCCT +
Preference number: 6 (lower is better)
Translates to: SLFPCRNSVAAA*TSSLKLNGASP
Trigger: AGGAGAGGCCCCGTTGAGTTTCAGGGATGAAGTCAAGGCAGCAGCCACAGAGTTTCTACAAGGAAAGAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585386.1
ENST00000588420.1
CDS CAA 90 bp ATGACTACATTTCTCGACCATTTCCTCCCTATCTCTTTCTGCGGCTaGACGCCGCCCCAGTCCTTACCCTTCCTTTTTGGCGCTACAGTT +
Preference number: 6 (lower is better)
Translates to: MTTFLDHFLPISFCG*TPPQSLPFLFGATV
Trigger: AACTGTAGCGCCAAAAAGGAAGGGTAAGGACTGGGGCGGCGTCAAGCCGCAGAAAGAGATAGGGAGGAAATGGTCGAGAAATGTAGTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000585386.1
ENST00000588420.1
CDS GCA 72 bp ATACTCTCGCTTTCTGTACTTATCTCTGCCTGGACATaGCAAAACCCGCCTGCAAATGGGCAAGGACCAGCT +
Preference number: 6 (lower is better)
Translates to: ILSLSVLISAWT*QNPPANGQGPA
Trigger: AGCTGGTCCTTGCCCATTTGCAGGCGGGTTTTGGCATGTCCAGGCAGAGATAAGTACAGAAAGCGAGAGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586902.5
ENST00000590580.5
CDS CCA 72 bp TTAACTGGGAGCATTTATGGGCAGTTTATAGAGGGATaGGCAGAGTGGAGAAAGCCACAAAGGATGGGGCGG +
Preference number: 6 (lower is better)
Translates to: LTGSIYGQFIEG*AEWRKPQRMGR
Trigger: CCGCCCCATCCTTTGTGGCTTTCTCCACTCTGCCCATCCCTCTATAAACTGCCCATAAATGCTCCCAGTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589876.5
CDS GCA 72 bp CCACACCGAGAGCATGTGATCATTGGATTCATCCACTaGACACAGCAGGTTGCCTCCATTTTGGATGTTGTG +
Preference number: 6 (lower is better)
Translates to: PHREHVIIGFIH*TQQVASILDVV
Trigger: CACAACATCCAAAATGGAGGCAACCTGCTGTGTGCAGTGGATGAATCCAATGATCACATGCTCTCGGTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586902.5
ENST00000590580.5
CDS CCA 72 bp GATGTCAAAGCTTCTGGAATCTGGAATGCCTCCACCTaGTCTCAGCCTCTGTTACTCCGTACCCCAGATTTT +
Preference number: 6 (lower is better)
Translates to: DVKASGIWNAST*SQPLLLRTPDF
Trigger: AAAATCTGGGGTACGGAGTAACAGAGGCTGAGACCAGGTGGAGGCATTCCAGATTCCAGAAGCTTTGACATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585386.1
ENST00000588420.1
CDS CCA 72 bp AAAGGCATACTCTCGCTTTCTGTACTTATCTCTGCCTaGACATGCCAAAACCCGCCTGCAAATGGGCAAGGA +
Preference number: 6 (lower is better)
Translates to: KGILSLSVLISA*TCQNPPANGQG
Trigger: TCCTTGCCCATTTGCAGGCGGGTTTTGGCATGTCCAGGCAGAGATAAGTACAGAAAGCGAGAGTATGCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586902.5
ENST00000590580.5
CDS GCA 72 bp CCACACCGAGAGCATGTGATCATTGGATTCATCCACTaGACACAGCAGGTTGCCTCCATTAGATTTGGAGAA +
Preference number: 6 (lower is better)
Translates to: PHREHVIIGFIH*TQQVASIRFGE
Trigger: TTCTCCAAATCTAATGGAGGCAACCTGCTGTGTGCAGTGGATGAATCCAATGATCACATGCTCTCGGTGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000245925.8
ENST00000399594.7
ENST00000536630.5
ENST00000586195.5
ENST00000586770.5
ENST00000587152.6
ENST00000587804.1
ENST00000588000.5
ENST00000588308.5
ENST00000588610.5
ENST00000589876.5
ENST00000592853.5
CDS CCA 72 bp ACTGCACACAGCAGGTTGCCTCCATTTTGGATGTTGTaGTGTTGTCAAACTGCTCTCCAAATTCCTAAAGGC +
Preference number: 6 (lower is better)
Translates to: TAHSRLPPFWML*CCQTALQIPKG
Trigger: GCCTTTAGGAATTTGGAGAGCAGTTTGACAACACCACAACATCCAAAATGGAGGCAACCTGCTGTGTGCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586902.5
ENST00000590580.5
CDS TCA 72 bp CATTCTGATTACGTCCATTTTCACGTATTCCTTATGTaGATACCTTCGAGGCCTCCAAGTTGGCTGCACCTC +
Preference number: 6 (lower is better)
Translates to: HSDYVHFHVFLM*IPSRPPSWLHL
Trigger: GAGGTGCAGCCAACTTGGAGGCCTCGAAGGTATTCACATAAGGAATACGTGAAAATGGACGTAATCAGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585386.1
ENST00000588420.1
CDS TCA 72 bp CCTCCCAAACTGCTAGAATTATATAGCCTTAGTTTTTaGCTCTGTCCAGATCTTCAGTATGGCCCCGCCTCT +
Preference number: 6 (lower is better)
Translates to: PPKLLELYSLSF*LCPDLQYGPAS
Trigger: AGAGGCGGGGCCATACTGAAGATCTGGACAGAGTCAAAAACTAAGGCTATATAATTCTAGCAGTTTGGGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588420.1
CDS CAA 72 bp TCCACTGCACACAGCAGGTTGCCTCCATTTTGGATGTaGTGGTGTTGTCAAACTGCTCTCCAAATTCCTAAA +
Preference number: 6 (lower is better)
Translates to: STAHSRLPPFWM*WCCQTALQIPK
Trigger: TTTAGGAATTTGGAGAGCAGTTTGACAACACCACAACATCCAAAATGGAGGCAACCTGCTGTGTGCAGTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586902.5
ENST00000590580.5