RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EML1 (Homo sapiens)

Ensembl gene IDs: ENSG00000066629

Ensembl transcript IDs: ENST00000262233.11, ENST00000327921.13, ENST00000334192.8, ENST00000553313.1, ENST00000553720.5, ENST00000554111.1, ENST00000554386.1, ENST00000554479.5, ENST00000554553.5, ENST00000555096.5, ENST00000555145.5, ENST00000555277.1, ENST00000555812.5, ENST00000556199.1, ENST00000556714.5, ENST00000556758.1, ENST00000556835.5, ENST00000556947.1, ENST00000557313.5, ENST00000557741.1, ENST00000649352.1

Found 868 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GATGGGGGATGCAAGCCAGGTGGGTGTGAAGAGGCTGACCGCATCTaGTTAGGCAGGACGGTGTCACTGAAACTTGGAAACGCCTGTGTA +
Preference number: 1 (lower is better)
Translates to: DGGCKPGGCEEADRI*LGRTVSLKLGNACV
Trigger: TACACAGGCGTTTCCAAGTTTCAGTGACACCGTCCTGCCTAACCAGATGCGGTCAGCCTCTTCACACCCACCTGGCTTGCATCCCCCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
3UTR TCA 90 bp ATACACAAGAAGGTGGCAAAATGTCTCACCGTGAATCAGGGCGTGTaGACAAGGGATGGGGGATGCAAGCCAGGTGGGTGTGAAGAGGCT +
Preference number: 1 (lower is better)
Translates to: IHKKVAKCLTVNQGV*TRDGGCKPGGCEEA
Trigger: AGCCTCTTCACACCCACCTGGCTTGCATCCCCCATCCCTTGTTCACACGCCCTGATTCACGGTGAGACATTTTGCCACCTTCTTGTGTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
3UTR CCA 90 bp GCCCATGCACAAAAGACAGGAAAAGCAGCTGCCCTTGGTACCTGGTaGAGCCTTTCGAGACTTCTCTCTGCAGGTTTATGGTACGCTCGA +
Preference number: 1 (lower is better)
Translates to: AHAQKTGKAAALGTW*SLSRLLSAGLWYAR
Trigger: TCGAGCGTACCATAAACCTGCAGAGAGAAGTCTCGAAAGGCTCCACCAGGTACCAAGGGCAGCTGCTTTTCCTGTCTTTTGTGCATGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
3UTR CCA 90 bp GTAATGGGTCGCCCATGCACAAAAGACAGGAAAAGCAGCTGCCCTTaGTACCTGGTGGAGCCTTTCGAGACTTCTCTCTGCAGGTTTATG +
Preference number: 1 (lower is better)
Translates to: VMGRPCTKDRKSSCP*YLVEPFETSLCRFM
Trigger: CATAAACCTGCAGAGAGAAGTCTCGAAAGGCTCCACCAGGTACCAAGGGCAGCTGCTTTTCCTGTCTTTTGTGCATGGGCGACCCATTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
3UTR TCA 90 bp TCATGCCAAGTAATATACACAAGAAGGTGGCAAAATGTCTCACCGTaGATCAGGGCGTGTGAACAAGGGATGGGGGATGCAAGCCAGGTG +
Preference number: 1 (lower is better)
Translates to: SCQVIYTRRWQNVSP*IRACEQGMGDASQV
Trigger: CACCTGGCTTGCATCCCCCATCCCTTGTTCACACGCCCTGATTCACGGTGAGACATTTTGCCACCTTCTTGTGTATATTACTTGGCATGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
3UTR GCA 90 bp CCTGTGTACCCTGCTGAAATATTGAAGTCAGTTAGGAGTAGAGTCTaGTTAGCACAAGAGGGATACAAGCCCTCTCTCACAGCCTCCCCA +
Preference number: 1 (lower is better)
Translates to: PVYPAEILKSVRSRV*LAQEGYKPSLTASP
Trigger: TGGGGAGGCTGTGAGAGAGGGCTTGTATCCCTCTTGTGCTAAGCAGACTCTACTCCTAACTGACTTCAATATTTCAGCAGGGTACACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
3UTR GCA 90 bp CCCCTGATGAATGCTTCCACGCCATCTGCAAACTACAGTCTCATCTaGAAACTACAGTCTCATCTGCAAATGGCCCAGGTGAGAATAAAA +
Preference number: 1 (lower is better)
Translates to: PLMNASTPSANYSLI*KLQSHLQMAQVRIK
Trigger: TTTTATTCTCACCTGGGCCATTTGCAGATGAGACTGTAGTTTGCAGATGAGACTGTAGTTTGCAGATGGCGTGGAAGCATTCATCAGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262233.11
ENST00000649352.1
3UTR GCA 90 bp ATCTGTCACACAATCGAAATGGATAAGGCCTTCTTGACAAATTTCTaGCACCTCCGTTTAACGCATCAGAACTCAATCTTATCTCATACT +
Preference number: 1 (lower is better)
Translates to: ICHTIEMDKAFLTNF*HLRLTHQNSILSHT
Trigger: AGTATGAGATAAGATTGAGTTCTGATGCGTTAAACGGAGGTGGCAGAAATTTGTCAAGAAGGCCTTATCCATTTCGATTGTGTGACAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
3UTR-3UTR GCA 90 bp TTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGCGCCCGCTGACACTTCCTTGCCCATGCTaGTCCCCACAGCTCTCGGTG +
Preference number: 2 (lower is better)
Translates to: LYNKSEHGTADPLWRPLTLPCPC*SPQLSV
Trigger: CACCGAGAGCTGTGGGGAGCAGCATGGGCAAGGAAG...TGTCAGCGGGCGCCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
3UTR-3UTR GCA 90 bp TTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGCGCCCGCTGACATGTCTTCCTTGCCCATaGTGCTCCCCACAGCTCTCG +
Preference number: 2 (lower is better)
Translates to: LYNKSEHGTADPLWRPLTCLPCP*CSPQLS
Trigger: CGAGAGCTGTGGGGAGCAGCATGGGCAAGGAAGACA...TGTCAGCGGGCGCCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
3UTR-3UTR CCA 90 bp CAAGAAGGTGGCAAAATGTCTCACCGTGAATCAGGGCGTGTGAACAAGGGATGGGAGGCTGACCGCATCTaGTTAGGCAGGACGGTGTCA +
Preference number: 2 (lower is better)
Translates to: QEGGKMSHRESGRVNKGWEADRI*LGRTVS
Trigger: TGACACCGTCCTGCCTAACCAGATGCGGTCAGCCTC...CCATCCCTTGTTCACACGCCCTGATTCACGGTGAGACATTTTGCCACCTTCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
3UTR-3UTR GCA 90 bp CTGTGTCATATATTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGCTTCCTTGCCCATGCTaGTCCCCACAGCTCTCGGTG +
Preference number: 2 (lower is better)
Translates to: LCHILYNKSEHGTADPLWLPCPC*SPQLSV
Trigger: CACCGAGAGCTGTGGGGAGCAGCATGGGCAAGGAAG...CCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATGACACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
3UTR CAA 90 bp TGTAATGGGTCGCCCATGCACAAAAGACAGGAAAAGCAGCTGCCCTaGGTACCTGGTGGAGCCTTTCGAGACTTCTCTCTGCAGGTTTAT +
Preference number: 2 (lower is better)
Translates to: CNGSPMHKRQEKQLP*VPGGAFRDFSLQVY
Trigger: ATAAACCTGCAGAGAGAAGTCTCGAAAGGCTCCACCAGGTACCAAGGGCAGCTGCTTTTCCTGTCTTTTGTGCATGGGCGACCCATTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
3UTR-3UTR TCA 90 bp GCAGTTTCTTTCCTGACCCCGGAGGGGGATGGTAGAGAGCCAGTAGGTTTCTTTACACAGTGCCATTGTTaGCCGTGGTTCTTAAAGGCA +
Preference number: 2 (lower is better)
Translates to: AVSFLTPEGDGREPVGFFTQCHC*PWFLKA
Trigger: TGCCTTTAAGAACCACGGTCAACAATGGCACTGTGT...AAAGAAACCTACTGGCTCTCTACCATCCCCCTCCGGGGTCAGGAAAGAAACTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555096.5
3UTR-3UTR GCA 90 bp TTCTGGCCACACTCCAAAAACATGGAATCCCAAAGTGCAGGTATAGGTAGCCCAAATGACCCGAGCACTTaGCCACTCGCGTGTACTTCC +
Preference number: 2 (lower is better)
Translates to: FWPHSKNMESQSAGIGSPNDPST*PLACTS
Trigger: GGAAGTACACGCGAGTGGGCAAGTGCTCGGGTCATT...TGGGCTACCTATACCTGCACTTTGGGATTCCATGTTTTTGGAGTGTGGCCAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557313.5
3UTR-3UTR GCA 90 bp TCAGAACTCAATCTTATCTCATACTGTAATGGGTCGCCCATGCACAAAAGACAGTGTCTTCCTTGCCCATaGTGCTCCCCACAGCTCTCG +
Preference number: 2 (lower is better)
Translates to: SELNLISYCNGSPMHKRQCLPCP*CSPQLS
Trigger: CGAGAGCTGTGGGGAGCAGCATGGGCAAGGAAGACA...CTGTCTTTTGTGCATGGGCGACCCATTACAGTATGAGATAAGATTGAGTTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
3UTR-3UTR CCA 90 bp CAAGAAGGTGGCAAAATGTCTCACCGTGAATCAGGGCGTGTGAACAAGGGATGGACGTTGCAACCTTGTTaGTATTCAATGTGCACTGTG +
Preference number: 2 (lower is better)
Translates to: QEGGKMSHRESGRVNKGWTLQPC*YSMCTV
Trigger: CACAGTGCACATTGAATACCAACAAGGTTGCAACGT...CCATCCCTTGTTCACACGCCCTGATTCACGGTGAGACATTTTGCCACCTTCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
3UTR-3UTR CCA 90 bp ATGGTAATTAGGCCAAATCCTTTATGGTTATCTCCCCTGATGAATGCTTCCACGGCCCTTGGTACCTGGTaGAGCCTTTCGAGACTTCTC +
Preference number: 2 (lower is better)
Translates to: MVIRPNPLWLSPLMNASTALGTW*SLSRLL
Trigger: GAGAAGTCTCGAAAGGCTCCACCAGGTACCAAGGGC...CGTGGAAGCATTCATCAGGGGAGATAACCATAAAGGATTTGGCCTAATTACCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262233.11
ENST00000649352.1
3UTR-3UTR CCA 90 bp TCAGAACTCAATCTTATCTCATACTGTAATGGGTCGCCCATGCACAAAAGACAGGCCCTTGGTACCTGGTaGAGCCTTTCGAGACTTCTC +
Preference number: 2 (lower is better)
Translates to: SELNLISYCNGSPMHKRQALGTW*SLSRLL
Trigger: GAGAAGTCTCGAAAGGCTCCACCAGGTACCAAGGGC...CTGTCTTTTGTGCATGGGCGACCCATTACAGTATGAGATAAGATTGAGTTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
3UTR CAA 90 bp ATAGGTAGCCCATTCAATGTCTCTTGTAGTTTCCACACTTACGACTaGCTTACAGGCAGAGGGAACCCAGTAGAGGATTTCGTAGTCTCC +
Preference number: 2 (lower is better)
Translates to: IGSPFNVSCSFHTYD*LTGRGNPVEDFVVS
Trigger: GGAGACTACGAAATCCTCTACTGGGTTCCCTCTGCCTGTAAGCAAGTCGTAAGTGTGGAAACTACAAGAGACATTGAATGGGCTACCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557313.5
3UTR-3UTR TCA 90 bp GAAGTTGCTGGAGACTTTATTTGGGACAAAAGCGACTGCTTCATAGACATTTCCAAGGAGCACAGATTTTaGGGCCAGCTGGATCCGTGT +
Preference number: 2 (lower is better)
Translates to: EVAGDFIWDKSDCFIDISKEHRF*GQLDPC
Trigger: ACACGGATCCAGCTGGCCTCAAAATCTGTGCTCCTT...GGAAATGTCTATGAAGCAGTCGCTTTTGTCCCAAATAAAGTCTCCAGCAACTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557741.1
3UTR-3UTR GCA 90 bp AACGTTGCAACCTTGTTGGTATTCAATGTGCACTGTGTCATATATTGTACAACACTTCCTTGCCCATGCTaGTCCCCACAGCTCTCGGTG +
Preference number: 2 (lower is better)
Translates to: NVATLLVFNVHCVIYCTTLPCPC*SPQLSV
Trigger: CACCGAGAGCTGTGGGGAGCAGCATGGGCAAGGAAG...TGTTGTACAATATATGACACAGTGCACATTGAATACCAACAAGGTTGCAACGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
3UTR-3UTR CCA 90 bp AATATCATCTCATGCCAAGTAATATACACAAGAAGGTGGCAAAATGTCTCACCGGAGGCTGACCGCATCTaGTTAGGCAGGACGGTGTCA +
Preference number: 2 (lower is better)
Translates to: NIISCQVIYTRRWQNVSPEADRI*LGRTVS
Trigger: TGACACCGTCCTGCCTAACCAGATGCGGTCAGCCTC...CGGTGAGACATTTTGCCACCTTCTTGTGTATATTACTTGGCATGAGATGATATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
3UTR-3UTR CCA 90 bp AATATCATCTCATGCCAAGTAATATACACAAGAAGGTGGCAAAATGTCTCACCGCGTGTGAACAAGGGATaGGGGATGCAAGCCAGGTGG +
Preference number: 2 (lower is better)
Translates to: NIISCQVIYTRRWQNVSPRVNKG*GMQARW
Trigger: CCACCTGGCTTGCATCCCCCATCCCTTGTTCACACG...CGGTGAGACATTTTGCCACCTTCTTGTGTATATTACTTGGCATGAGATGATATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
3UTR CAA 90 bp AAACGTTGCAACCTTGTTGGTATTCAATGTGCACTGTGTCATATATaGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGCGC +
Preference number: 2 (lower is better)
Translates to: KRCNLVGIQCALCHI*YNKSEHGTADPLWR
Trigger: GCGCCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATGACACAGTGCACATTGAATACCAACAAGGTTGCAACGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
3UTR-3UTR TCA 90 bp AAGTCAGTTAGGAGTAGAGTCTGCTTAGCACAAGAGGGATACAAGCCCTCTCTCTTCACTCTTCTGAAGTaGTCTGTCCTTTTAGGACCA +
Preference number: 2 (lower is better)
Translates to: KSVRSRVCLAQEGYKPSLFTLLK*SVLLGP
Trigger: TGGTCCTAAAAGGACAGATCACTTCAGAAGAGTGAA...GAGAGAGGGCTTGTATCCCTCTTGTGCTAAGCAGACTCTACTCCTAACTGACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
3UTR-3UTR TCA 90 bp CAAGAAGGTGGCAAAATGTCTCACCGTGAATCAGGGCGTGTGAACAAGGGATGGCAAGGGAGAATGCAATaGAACTTTGGAAAATGTAAC +
Preference number: 2 (lower is better)
Translates to: QEGGKMSHRESGRVNKGWQGRMQ*NFGKCN
Trigger: GTTACATTTTCCAAAGTTTCATTGCATTCTCCCTTG...CCATCCCTTGTTCACACGCCCTGATTCACGGTGAGACATTTTGCCACCTTCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
3UTR-3UTR TCA 90 bp CTGCCACCTCCGTTTAACGCATCAGAACTCAATCTTATCTCATACTGTAATGGGCGAGAGAGATCTTTCTaGCTTGGTCTACTTGGTCAT +
Preference number: 2 (lower is better)
Translates to: LPPPFNASELNLISYCNGRERSF*LGLLGH
Trigger: ATGACCAAGTAGACCAAGTCAGAAAGATCTCTCTCG...CCCATTACAGTATGAGATAAGATTGAGTTCTGATGCGTTAAACGGAGGTGGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
3UTR-3UTR GCA 90 bp AAGTCAGTTAGGAGTAGAGTCTGCTTAGCACAAGAGGGATACAAGCCCTCTCTCCTCCTGATTCAGCTGTaGAAATCAGTTATTCACTCT +
Preference number: 2 (lower is better)
Translates to: KSVRSRVCLAQEGYKPSLLLIQL*KSVIHS
Trigger: AGAGTGAATAACTGATTTGCACAGCTGAATCAGGAG...GAGAGAGGGCTTGTATCCCTCTTGTGCTAAGCAGACTCTACTCCTAACTGACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
3UTR-3UTR GCA 90 bp CTGCCACCTCCGTTTAACGCATCAGAACTCAATCTTATCTCATACTGTAATGGGGTTAGGAGTAGAGTCTaGTTAGCACAAGAGGGATAC +
Preference number: 2 (lower is better)
Translates to: LPPPFNASELNLISYCNGVRSRV*LAQEGY
Trigger: GTATCCCTCTTGTGCTAAGCAGACTCTACTCCTAAC...CCCATTACAGTATGAGATAAGATTGAGTTCTGATGCGTTAAACGGAGGTGGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
3UTR-3UTR TCA 90 bp ATGGTAATTAGGCCAAATCCTTTATGGTTATCTCCCCTGATGAATGCTTCCACGCGAGAGAGATCTTTCTaGCTTGGTCTACTTGGTCAT +
Preference number: 2 (lower is better)
Translates to: MVIRPNPLWLSPLMNASTRERSF*LGLLGH
Trigger: ATGACCAAGTAGACCAAGTCAGAAAGATCTCTCTCG...CGTGGAAGCATTCATCAGGGGAGATAACCATAAAGGATTTGGCCTAATTACCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262233.11
ENST00000649352.1
3UTR-3UTR GCA 90 bp GGTAGCCCATTCAATGTCTCTTGTAGTTTCCACACTTACGACTTGCTTACAGGCCGCCATATATATAGATaGAGTTGTCATGTGAGCCTA +
Preference number: 2 (lower is better)
Translates to: GSPFNVSCSFHTYDLLTGRHIYR*SCHVSL
Trigger: TAGGCTCACATGACAACTGCATCTATATATATGGCG...GCCTGTAAGCAAGTCGTAAGTGTGGAAACTACAAGAGACATTGAATGGGCTACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557313.5
3UTR-3UTR CCA 90 bp AATTTCTGCCACCTCCGTTTAACGCATCAGAACTCAATCTTATCTCATACTGTAGGTGTCACTGAAACTTaGAAACGCCTGTGTACCCTG +
Preference number: 2 (lower is better)
Translates to: NFCHLRLTHQNSILSHTVGVTET*KRLCTL
Trigger: CAGGGTACACAGGCGTTTCCAAGTTTCAGTGACACC...TACAGTATGAGATAAGATTGAGTTCTGATGCGTTAAACGGAGGTGGCAGAAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
3UTR-3UTR TCA 90 bp AGTCTCATCTGCAAACTACAGTCTCATCTGCAAATGGCCCAGGTGAGAATAAAAACCCTGCTGAAATATTaGAGTCAGTTAGGAGTAGAG +
Preference number: 2 (lower is better)
Translates to: SLICKLQSHLQMAQVRIKTLLKY*SQLGVE
Trigger: CTCTACTCCTAACTGACTTCAATATTTCAGCAGGGT...TTTTATTCTCACCTGGGCCATTTGCAGATGAGACTGTAGTTTGCAGATGAGACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262233.11
ENST00000649352.1
3UTR-3UTR CCA 90 bp TCAGAACTCAATCTTATCTCATACTGTAATGGGTCGCCCATGCACAAAAGACAGACGTTGCAACCTTGTTaGTATTCAATGTGCACTGTG +
Preference number: 2 (lower is better)
Translates to: SELNLISYCNGSPMHKRQTLQPC*YSMCTV
Trigger: CACAGTGCACATTGAATACCAACAAGGTTGCAACGT...CTGTCTTTTGTGCATGGGCGACCCATTACAGTATGAGATAAGATTGAGTTCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
3UTR-3UTR TCA 90 bp GACAAATTTCTGCCACCTCCGTTTAACGCATCAGAACTCAATCTTATCTCATACTTCACTCTTCTGAAGTaGTCTGTCCTTTTAGGACCA +
Preference number: 2 (lower is better)
Translates to: DKFLPPPFNASELNLISYFTLLK*SVLLGP
Trigger: TGGTCCTAAAAGGACAGATCACTTCAGAAGAGTGAA...GTATGAGATAAGATTGAGTTCTGATGCGTTAAACGGAGGTGGCAGAAATTTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
3UTR-3UTR TCA 90 bp CTGCCACCTCCGTTTAACGCATCAGAACTCAATCTTATCTCATACTGTAATGGGCAAGGGAGAATGCAATaGAACTTTGGAAAATGTAAC +
Preference number: 2 (lower is better)
Translates to: LPPPFNASELNLISYCNGQGRMQ*NFGKCN
Trigger: GTTACATTTTCCAAAGTTTCATTGCATTCTCCCTTG...CCCATTACAGTATGAGATAAGATTGAGTTCTGATGCGTTAAACGGAGGTGGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
3UTR-3UTR GCA 90 bp AATTTCTGCCACCTCCGTTTAACGCATCAGAACTCAATCTTATCTCATACTGTAGTTAGGAGTAGAGTCTaGTTAGCACAAGAGGGATAC +
Preference number: 2 (lower is better)
Translates to: NFCHLRLTHQNSILSHTVVRSRV*LAQEGY
Trigger: GTATCCCTCTTGTGCTAAGCAGACTCTACTCCTAAC...TACAGTATGAGATAAGATTGAGTTCTGATGCGTTAAACGGAGGTGGCAGAAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
3UTR-3UTR TCA 90 bp AATATCATCTCATGCCAAGTAATATACACAAGAAGGTGGCAAAATGTCTCACCGACCCTGCTGAAATATTaGAGTCAGTTAGGAGTAGAG +
Preference number: 2 (lower is better)
Translates to: NIISCQVIYTRRWQNVSPTLLKY*SQLGVE
Trigger: CTCTACTCCTAACTGACTTCAATATTTCAGCAGGGT...CGGTGAGACATTTTGCCACCTTCTTGTGTATATTACTTGGCATGAGATGATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
3UTR-3UTR CCA 90 bp CAAGGATACATACAAACAGATTCATCTTCAATAATACATGGTGTTTACTGGTGCCTCTCTGCAGGTTTATaGTACGCTCGAGAGAGATCT +
Preference number: 2 (lower is better)
Translates to: QGYIQTDSSSIIHGVYWCLSAGL*YARERS
Trigger: AGATCTCTCTCGAGCGTACCATAAACCTGCAGAGAG...GCACCAGTAAACACCATGTATTATTGAAGATGAATCTGTTTGTATGTATCCTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
3UTR CAA 90 bp CAGGTTTATGGTACGCTCGAGAGAGATCTTTCTGACTTGGTCTACTaGGTCATAAAATACAAATATACAATGTCCATAAGCATAAGACAG +
Preference number: 2 (lower is better)
Translates to: QVYGTLERDLSDLVY*VIKYKYTMSISIRQ
Trigger: CTGTCTTATGCTTATGGACATTGTATATTTGTATTTTATGACCAAGTAGACCAAGTCAGAAAGATCTCTCTCGAGCGTACCATAAACCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
3UTR-3UTR TCA 90 bp TTGAGTATGGTAATTAGGCCAAATCCTTTATGGTTATCTCCCCTGATGAATGCTACCAGTTACTTCTGTTaGTGTGGCTATAATGTAAAC +
Preference number: 2 (lower is better)
Translates to: LSMVIRPNPLWLSPLMNATSYFC*CGYNVN
Trigger: GTTTACATTATAGCCACATCAACAGAAGTAACTGGT...AGCATTCATCAGGGGAGATAACCATAAAGGATTTGGCCTAATTACCATACTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262233.11
ENST00000649352.1
3UTR-3UTR TCA 90 bp CAAGGATACATACAAACAGATTCATCTTCAATAATACATGGTGTTTACTGGTGCTTCACTCTTCTGAAGTaGTCTGTCCTTTTAGGACCA +
Preference number: 2 (lower is better)
Translates to: QGYIQTDSSSIIHGVYWCFTLLK*SVLLGP
Trigger: TGGTCCTAAAAGGACAGATCACTTCAGAAGAGTGAA...GCACCAGTAAACACCATGTATTATTGAAGATGAATCTGTTTGTATGTATCCTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
3UTR-3UTR TCA 90 bp AATTTCTGCCACCTCCGTTTAACGCATCAGAACTCAATCTTATCTCATACTGTACAAGGGAGAATGCAATaGAACTTTGGAAAATGTAAC +
Preference number: 2 (lower is better)
Translates to: NFCHLRLTHQNSILSHTVQGRMQ*NFGKCN
Trigger: GTTACATTTTCCAAAGTTTCATTGCATTCTCCCTTG...TACAGTATGAGATAAGATTGAGTTCTGATGCGTTAAACGGAGGTGGCAGAAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
3UTR-3UTR TCA 90 bp CAATTCCTCAACAGCCATCGTGGTTCAGTACCTCATTATCATCATAAATATTTGACCAGTTACTTCTGTTaGTGTGGCTATAATGTAAAC +
Preference number: 2 (lower is better)
Translates to: QFLNSHRGSVPHYHHKYLTSYFC*CGYNVN
Trigger: GTTTACATTATAGCCACATCAACAGAAGTAACTGGT...CAAATATTTATGATGATAATGAGGTACTGAACCACGATGGCTGTTGAGGAATTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
3UTR-3UTR TCA 90 bp CAAGGATACATACAAACAGATTCATCTTCAATAATACATGGTGTTTACTGGTGCTCTGCAGTAGGCTGGTaGTGTCATCAAAAATGTTTT +
Preference number: 2 (lower is better)
Translates to: QGYIQTDSSSIIHGVYWCSAVGW*CHQKCF
Trigger: AAAACATTTTTGATGACATCACCAGCCTACTGCAGA...GCACCAGTAAACACCATGTATTATTGAAGATGAATCTGTTTGTATGTATCCTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
3UTR TCA 72 bp AAGGTGGCAAAATGTCTCACCGTGAATCAGGGCGTGTaGACAAGGGATGGGGGATGCAAGCCAGGTGGGTGT +
Preference number: 3 (lower is better)
Translates to: KVAKCLTVNQGV*TRDGGCKPGGC
Trigger: ACACCCACCTGGCTTGCATCCCCCATCCCTTGTTCACACGCCCTGATTCACGGTGAGACATTTTGCCACCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
3UTR CCA 72 bp CGCCCATGCACAAAAGACAGGAAAAGCAGCTGCCCTTaGTACCTGGTGGAGCCTTTCGAGACTTCTCTCTGC +
Preference number: 3 (lower is better)
Translates to: RPCTKDRKSSCP*YLVEPFETSLC
Trigger: GCAGAGAGAAGTCTCGAAAGGCTCCACCAGGTACCAAGGGCAGCTGCTTTTCCTGTCTTTTGTGCATGGGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
3UTR TCA 72 bp CTTCCCAGCTTAACATGGTGGAAGGAGCACAGATTTTaGGGCCAGCTGGATCCGTGTTCTAGGGCTTGGGTG +
Preference number: 3 (lower is better)
Translates to: LPSLTWWKEHRF*GQLDPCSRAWV
Trigger: CACCCAAGCCCTAGAACACGGATCCAGCTGGCCTCAAAATCTGTGCTCCTTCCACCATGTTAAGCTGGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557741.1
3UTR CCA 72 bp CAAAAGACAGGAAAAGCAGCTGCCCTTGGTACCTGGTaGAGCCTTTCGAGACTTCTCTCTGCAGGTTTATGG +
Preference number: 3 (lower is better)
Translates to: QKTGKAAALGTW*SLSRLLSAGLW
Trigger: CCATAAACCTGCAGAGAGAAGTCTCGAAAGGCTCCACCAGGTACCAAGGGCAGCTGCTTTTCCTGTCTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
3UTR-3UTR CAA 90 bp AGTCTCATCTGCAAACTACAGTCTCATCTGCAAATGGCCCAGGTGAGAATAAAAGAGTCTGTGTCTTCCTaGCCCATGCTGCTCCCCACA +
Preference number: 3 (lower is better)
Translates to: SLICKLQSHLQMAQVRIKESVSS*PMLLPT
Trigger: TGTGGGGAGCAGCATGGGCAAGGAAGACACAGACTC...TTTTATTCTCACCTGGGCCATTTGCAGATGAGACTGTAGTTTGCAGATGAGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262233.11
ENST00000649352.1
3UTR-3UTR CAA 90 bp TCAGAACTCAATCTTATCTCATACTGTAATGGGTCGCCCATGCACAAAAGACAGGAGTCTGTGTCTTCCTaGCCCATGCTGCTCCCCACA +
Preference number: 3 (lower is better)
Translates to: SELNLISYCNGSPMHKRQESVSS*PMLLPT
Trigger: TGTGGGGAGCAGCATGGGCAAGGAAGACACAGACTC...CTGTCTTTTGTGCATGGGCGACCCATTACAGTATGAGATAAGATTGAGTTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
3UTR-3UTR CAA 90 bp TTCTGGCCACACTCCAAAAACATGGAATCCCAAAGTGCAGGTATAGGTAGCCCACGTAGTCTCCGGAATTaGACACGAGGAACTGTGAGT +
Preference number: 3 (lower is better)
Translates to: FWPHSKNMESQSAGIGSPRSLRN*TRGTVS
Trigger: ACTCACAGTTCCTCGTGTCAAATTCCGGAGACTACG...TGGGCTACCTATACCTGCACTTTGGGATTCCATGTTTTTGGAGTGTGGCCAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557313.5
3UTR TCA 72 bp GTAATATACACAAGAAGGTGGCAAAATGTCTCACCGTaGATCAGGGCGTGTGAACAAGGGATGGGGGATGCA +
Preference number: 3 (lower is better)
Translates to: VIYTRRWQNVSP*IRACEQGMGDA
Trigger: TGCATCCCCCATCCCTTGTTCACACGCCCTGATTCACGGTGAGACATTTTGCCACCTTCTTGTGTATATTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
3UTR GCA 72 bp AATGCTTCCACGCCATCTGCAAACTACAGTCTCATCTaGAAACTACAGTCTCATCTGCAAATGGCCCAGGTG +
Preference number: 3 (lower is better)
Translates to: NASTPSANYSLI*KLQSHLQMAQV
Trigger: CACCTGGGCCATTTGCAGATGAGACTGTAGTTTGCAGATGAGACTGTAGTTTGCAGATGGCGTGGAAGCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262233.11
ENST00000649352.1
3UTR-3UTR CAA 90 bp CAATGTGCACTGTGTCATATATTGTACAACAAAAGTGAACACGGAACCGCTGATGAGTCTGTGTCTTCCTaGCCCATGCTGCTCCCCACA +
Preference number: 3 (lower is better)
Translates to: QCALCHILYNKSEHGTADESVSS*PMLLPT
Trigger: TGTGGGGAGCAGCATGGGCAAGGAAGACACAGACTC...ATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATGACACAGTGCACATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
3UTR-3UTR CAA 90 bp TGTGAAGAGGCTGACCGCATCTGGTTAGGCAGGACGGTGTCACTGAAACTTGGATACCCTGCTGAAATATaGAAGTCAGTTAGGAGTAGA +
Preference number: 3 (lower is better)
Translates to: CEEADRIWLGRTVSLKLGYPAEI*KSVRSR
Trigger: TCTACTCCTAACTGACTTCAATATTTCAGCAGGGTA...TCCAAGTTTCAGTGACACCGTCCTGCCTAACCAGATGCGGTCAGCCTCTTCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
3UTR-3UTR CAA 90 bp AGAAGTTGCTGGAGACTTTATTTGGGACAAAAGCGACTGCTTCATAGACATTTCGAAGGAGCACAGATTTaGAGGCCAGCTGGATCCGTG +
Preference number: 3 (lower is better)
Translates to: RSCWRLYLGQKRLLHRHFEGAQI*RPAGSV
Trigger: CACGGATCCAGCTGGCCTCAAAATCTGTGCTCCTTC...GAAATGTCTATGAAGCAGTCGCTTTTGTCCCAAATAAAGTCTCCAGCAACTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557741.1
3UTR-3UTR CAA 90 bp TTGAGTATGGTAATTAGGCCAAATCCTTTATGGTTATCTCCCCTGATGAATGCTGAAAAGCAGCTGCCCTaGGTACCTGGTGGAGCCTTT +
Preference number: 3 (lower is better)
Translates to: LSMVIRPNPLWLSPLMNAEKQLP*VPGGAF
Trigger: AAAGGCTCCACCAGGTACCAAGGGCAGCTGCTTTTC...AGCATTCATCAGGGGAGATAACCATAAAGGATTTGGCCTAATTACCATACTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262233.11
ENST00000649352.1
3UTR GCA 72 bp CCTGCTGAAATATTGAAGTCAGTTAGGAGTAGAGTCTaGTTAGCACAAGAGGGATACAAGCCCTCTCTCACA +
Preference number: 3 (lower is better)
Translates to: PAEILKSVRSRV*LAQEGYKPSLT
Trigger: TGTGAGAGAGGGCTTGTATCCCTCTTGTGCTAAGCAGACTCTACTCCTAACTGACTTCAATATTTCAGCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
3UTR GCA 72 bp GAAGTTGCTGGAGACTTTATTTGGGACAAAAGCGACTaGTTCATAGACATTTCCAACCAATACTTCCCAGCT +
Preference number: 3 (lower is better)
Translates to: EVAGDFIWDKSD*FIDISNQYFPA
Trigger: AGCTGGGAAGTATTGGTTGGAAATGTCTATGAAGCAGTCGCTTTTGTCCCAAATAAAGTCTCCAGCAACTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557741.1
3UTR-3UTR CAA 90 bp AGCCTCCCCAAGGGAGAATGCAATGAAACTTTGGAAAATGTAACCAAACACAGTGTAAACGTTGCAACCTaGTTGGTATTCAATGTGCAC +
Preference number: 3 (lower is better)
Translates to: SLPKGECNETLENVTKHSVNVAT*LVFNVH
Trigger: GTGCACATTGAATACCAACAAGGTTGCAACGTTTAC...ACTGTGTTTGGTTACATTTTCCAAAGTTTCATTGCATTCTCCCTTGGGGAGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
3UTR-3UTR CAA 90 bp CTGCCACCTCCGTTTAACGCATCAGAACTCAATCTTATCTCATACTGTAATGGGGCACTGTGTCATATATaGTACAACAAAAGTGAACAC +
Preference number: 3 (lower is better)
Translates to: LPPPFNASELNLISYCNGALCHI*YNKSEH
Trigger: GTGTTCACTTTTGTTGTACAATATATGACACAGTGC...CCCATTACAGTATGAGATAAGATTGAGTTCTGATGCGTTAAACGGAGGTGGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
3UTR-3UTR CAA 90 bp GACAAATTTCTGCCACCTCCGTTTAACGCATCAGAACTCAATCTTATCTCATACGTAAACGTTGCAACCTaGTTGGTATTCAATGTGCAC +
Preference number: 3 (lower is better)
Translates to: DKFLPPPFNASELNLISYVNVAT*LVFNVH
Trigger: GTGCACATTGAATACCAACAAGGTTGCAACGTTTAC...GTATGAGATAAGATTGAGTTCTGATGCGTTAAACGGAGGTGGCAGAAATTTGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
3UTR-3UTR CAA 90 bp TCAGAACTCAATCTTATCTCATACTGTAATGGGTCGCCCATGCACAAAAGACAGTACCCTGCTGAAATATaGAAGTCAGTTAGGAGTAGA +
Preference number: 3 (lower is better)
Translates to: SELNLISYCNGSPMHKRQYPAEI*KSVRSR
Trigger: TCTACTCCTAACTGACTTCAATATTTCAGCAGGGTA...CTGTCTTTTGTGCATGGGCGACCCATTACAGTATGAGATAAGATTGAGTTCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
3UTR-3UTR CAA 90 bp AGCCTCCCCAAGGGAGAATGCAATGAAACTTTGGAAAATGTAACCAAACACAGTGCACTGTGTCATATATaGTACAACAAAAGTGAACAC +
Preference number: 3 (lower is better)
Translates to: SLPKGECNETLENVTKHSALCHI*YNKSEH
Trigger: GTGTTCACTTTTGTTGTACAATATATGACACAGTGC...ACTGTGTTTGGTTACATTTTCCAAAGTTTCATTGCATTCTCCCTTGGGGAGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
3UTR GCA 72 bp AACACAGTCTCATCTTTGTGTCTCCTGATTCAGCTGTaGAAATCAGTTATTCACTCTTCTGAAGTGATCTGT +
Preference number: 3 (lower is better)
Translates to: NTVSSLCLLIQL*KSVIHSSEVIC
Trigger: ACAGATCACTTCAGAAGAGTGAATAACTGATTTGCACAGCTGAATCAGGAGACACAAAGATGAGACTGTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
3UTR GCA 72 bp ACAATCGAAATGGATAAGGCCTTCTTGACAAATTTCTaGCACCTCCGTTTAACGCATCAGAACTCAATCTTA +
Preference number: 3 (lower is better)
Translates to: TIEMDKAFLTNF*HLRLTHQNSIL
Trigger: TAAGATTGAGTTCTGATGCGTTAAACGGAGGTGGCAGAAATTTGTCAAGAAGGCCTTATCCATTTCGATTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
3UTR-3UTR CAA 90 bp CAATTCCTCAACAGCCATCGTGGTTCAGTACCTCATTATCATCATAAATATTTGAACGTTGCAACCTTGTaGGTATTCAATGTGCACTGT +
Preference number: 3 (lower is better)
Translates to: QFLNSHRGSVPHYHHKYLNVATL*VFNVHC
Trigger: ACAGTGCACATTGAATACCAACAAGGTTGCAACGTT...CAAATATTTATGATGATAATGAGGTACTGAACCACGATGGCTGTTGAGGAATTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR TCA 90 bp ACCCGAGCACTTGCCCACTCGCGTGTACTTCCTCCCGTTGTCACTAACGCCATATCCCAGACGGGACGGTaGCCCACAGCGTCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: TRALAHSRVLPPVVTNAISQTGR*PTASQR
Trigger: TCTCTGGGACGCTGTGGGTCACCGTCCCGTCTGGGA...TATGGCGTTAGTGACAACGGGAGGAAGTACACGCGAGTGGGCAAGTGCTCGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557313.5
CDS-3UTR TCA 90 bp GTGACCAAGGGTAATGCGAGTCTGTGTCTTCCTTGCCCATGCTGCTCCCCACAGGGGTGTGAAGTCCCCTaGCAGAGTGCCCTGCAGGAC +
Preference number: 4 (lower is better)
Translates to: VTKGNASLCLPCPCCSPQGCEVP*QSALQD
Trigger: GTCCTGCAGGGCACTCTGTCAGGGGACTTCACACCC...CTGTGGGGAGCAGCATGGGCAAGGAAGACACAGACTCGCATTACCCTTGGTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CCA 90 bp TTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGCGCCCGCTGACACCAGCGGCATGGTCCTaGGCAACGTCCACCCCTCTC +
Preference number: 4 (lower is better)
Translates to: LYNKSEHGTADPLWRPLTPAAWS*ATSTPL
Trigger: GAGAGGGGTGGACGTTGCCCAGGACCATGCCGCTGG...TGTCAGCGGGCGCCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327921.13
CDS-3UTR TCA 90 bp GTGACCAAGGGTAATGCGAGTCTGTGTCTTCCTTGCCCATGCTGCTCCCCACAGTGTGGCTTGGAGCCCTaGACTGCGAGCAGGGGTATG +
Preference number: 4 (lower is better)
Translates to: VTKGNASLCLPCPCCSPQCGLEP*TASRGM
Trigger: CATACCCCTGCTCGCAGTTCAGGGCTCCAAGCCACA...CTGTGGGGAGCAGCATGGGCAAGGAAGACACAGACTCGCATTACCCTTGGTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR TCA 90 bp GTGACCAAGGGTAATGCGAGTCTGTGTCTTCCTTGCCCATGCTGCTCCCCACAGTCCCGCCCGTGGAGATaGGGTGGCTGTCTTCACAGA +
Preference number: 4 (lower is better)
Translates to: VTKGNASLCLPCPCCSPQSRPWR*GGCLHR
Trigger: TCTGTGAAGACAGCCACCTCATCTCCACGGGCGGGA...CTGTGGGGAGCAGCATGGGCAAGGAAGACACAGACTCGCATTACCCTTGGTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR TCA 90 bp GTGACCAAGGGTAATGCGAGTCTGTGTCTTCCTTGCCCATGCTGCTCCCCACAGTCCTGCGCATCTGGGTaGTGGCAAGTAGGGCAGACG +
Preference number: 4 (lower is better)
Translates to: VTKGNASLCLPCPCCSPQSCASG*WQVGQT
Trigger: CGTCTGCCCTACTTGCCATCACCCAGATGCGCAGGA...CTGTGGGGAGCAGCATGGGCAAGGAAGACACAGACTCGCATTACCCTTGGTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327921.13
CDS-3UTR GCA 90 bp GTGACCAAGGGTAATGCGAGTCTGTGTCTTCCTTGCCCATGCTGCTCCCCACAGCTTCCTTGCCCATGCTaGTCCCCACAGCTCTCGGTG +
Preference number: 4 (lower is better)
Translates to: VTKGNASLCLPCPCCSPQLPCPC*SPQLSV
Trigger: CACCGAGAGCTGTGGGGAGCAGCATGGGCAAGGAAG...CTGTGGGGAGCAGCATGGGCAAGGAAGACACAGACTCGCATTACCCTTGGTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp GTGACCAAGGGTAATGCGAGTCTGTGTCTTCCTTGCCCATGCTGCTCCCCACAGGTGGCCTGGGAGTTCTaGAGAGCAGAGAGGGGATCC +
Preference number: 4 (lower is better)
Translates to: VTKGNASLCLPCPCCSPQVAWEF*RAERGS
Trigger: GGATCCCCTCTCTGCTCTGCAGAACTCCCAGGCCAC...CTGTGGGGAGCAGCATGGGCAAGGAAGACACAGACTCGCATTACCCTTGGTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327921.13
CDS-3UTR CCA 90 bp TTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGCGCCCGCTGACACCTGTTCCAGCGGCATaGTCCTGGGCAACGTCCACC +
Preference number: 4 (lower is better)
Translates to: LYNKSEHGTADPLWRPLTPVPAA*SWATST
Trigger: GGTGGACGTTGCCCAGGACCATGCCGCTGGAACAGG...TGTCAGCGGGCGCCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327921.13
CDS-3UTR CCA 90 bp CATATATTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGCGCCCGGCGCCCACCTCGGCCTaGCTGCTCCTCTTCCCATCC +
Preference number: 4 (lower is better)
Translates to: HILYNKSEHGTADPLWRPAPTSA*LLLFPS
Trigger: GGATGGGAAGAGGAGCAGCCAGGCCGAGGTGGGCGC...CGGGCGCCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327921.13
CDS-3UTR TCA 90 bp TTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGCGCCCGCTGACACCACCACGGATGCGATaGAGTAGACGGTCTCTCCCG +
Preference number: 4 (lower is better)
Translates to: LYNKSEHGTADPLWRPLTPPRMR*SRRSLP
Trigger: CGGGAGAGACCGTCTACTTCATCGCATCCGTGGTGG...TGTCAGCGGGCGCCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp GCTGGCACAGCAGTTTCTTTCCTGACCCCGGAGGGGGATGGTAGAGAGCCAGTAGGTCTGTCACCTCCATaGTACTTGCAGCAGAAGCGC +
Preference number: 4 (lower is better)
Translates to: AGTAVSFLTPEGDGREPVGLSPP*YLQQKR
Trigger: GCGCTTCTGCTGCAAGTAGCATGGAGGTGACAGACC...TACTGGCTCTCTACCATCCCCCTCCGGGGTCAGGAAAGAAACTGCTGTGCCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555096.5
CDS-3UTR GCA 90 bp GCTGGCACAGCAGTTTCTTTCCTGACCCCGGAGGGGGATGGTAGAGAGCCAGTAGCTCCAGTGAAGCAATaGGGTCTGTCACCTCCATGC +
Preference number: 4 (lower is better)
Translates to: AGTAVSFLTPEGDGREPVAPVKQ*GLSPPC
Trigger: GCATGGAGGTGACAGACCGCATTGCTTCACTGGAGC...TACTGGCTCTCTACCATCCCCCTCCGGGGTCAGGAAAGAAACTGCTGTGCCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555096.5
CDS-3UTR CCA 90 bp ACCCGAGCACTTGCCCACTCGCGTGTACTTCCTCCCGTTGTCACTAACGCCATACAGCGTCCCAGAGAGTaGCATGCTTGTCATGCCCAC +
Preference number: 4 (lower is better)
Translates to: TRALAHSRVLPPVVTNAIQRPRE*HACHAH
Trigger: GTGGGCATGACAAGCATGCCACTCTCTGGGACGCTG...TATGGCGTTAGTGACAACGGGAGGAAGTACACGCGAGTGGGCAAGTGCTCGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557313.5
CDS-3UTR CCA 90 bp GTGACCAAGGGTAATGCGAGTCTGTGTCTTCCTTGCCCATGCTGCTCCCCACAGCCCCACAGCTCTCGGTaGGTACTAAATGACGCGCCA +
Preference number: 4 (lower is better)
Translates to: VTKGNASLCLPCPCCSPQPHSSR*VLNDAP
Trigger: TGGCGCGTCATTTAGTACCCACCGAGAGCTGTGGGG...CTGTGGGGAGCAGCATGGGCAAGGAAGACACAGACTCGCATTACCCTTGGTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR TCA 90 bp ACAGCAGTTTCTTTCCTGACCCCGGAGGGGGATGGTAGAGAGCCAGTAGGTTTCCAGCAGTTTCTTTCCTaGCCCCGGAGGGGGATGGTA +
Preference number: 4 (lower is better)
Translates to: TAVSFLTPEGDGREPVGFQQFLS*PRRGMV
Trigger: TACCATCCCCCTCCGGGGTCAGGAAAGAAACTGCTG...GAAACCTACTGGCTCTCTACCATCCCCCTCCGGGGTCAGGAAAGAAACTGCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000555096.5
CDS-3UTR TCA 90 bp CATATATTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGCGCCCGGGGTGTGAAGTCCCCTaGCAGAGTGCCCTGCAGGAC +
Preference number: 4 (lower is better)
Translates to: HILYNKSEHGTADPLWRPGCEVP*QSALQD
Trigger: GTCCTGCAGGGCACTCTGTCAGGGGACTTCACACCC...CGGGCGCCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR TCA 90 bp CATATATTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGCGCCCGCCCGACAGACGGCATTaGTGTCGGTTCCGTCCGAGC +
Preference number: 4 (lower is better)
Translates to: HILYNKSEHGTADPLWRPPDRRH*CRFRPS
Trigger: GCTCGGACGGAACCGACATCAATGCCGTCTGTCGGG...CGGGCGCCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR TCA 90 bp TTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGCGCCCGCTGACACTGCGAGCAGGGGTATaGGAAGAGGTGCACTTTGCC +
Preference number: 4 (lower is better)
Translates to: LYNKSEHGTADPLWRPLTLRAGV*EEVHFA
Trigger: GGCAAAGTGCACCTCTTCTCATACCCCTGCTCGCAG...TGTCAGCGGGCGCCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR TCA 90 bp TGTGAAGAGGCTGACCGCATCTGGTTAGGCAGGACGGTGTCACTGAAACTTGGATGTGGCTTGGAGCCCTaGACTGCGAGCAGGGGTATG +
Preference number: 4 (lower is better)
Translates to: CEEADRIWLGRTVSLKLGCGLEP*TASRGM
Trigger: CATACCCCTGCTCGCAGTTCAGGGCTCCAAGCCACA...TCCAAGTTTCAGTGACACCGTCCTGCCTAACCAGATGCGGTCAGCCTCTTCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR TCA 90 bp TTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGCGCCCGCTGACAGGAAATCGACATTGGTaGCATGGCTGCTGTGCCCGC +
Preference number: 4 (lower is better)
Translates to: LYNKSEHGTADPLWRPLTGNRHW*HGCCAR
Trigger: GCGGGCACAGCAGCCATGTCACCAATGTCGATTTCC...TGTCAGCGGGCGCCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR TCA 90 bp CTGTGTCATATATTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGCACCACACACTGAGCTaGGCCCGACCGCGACCGGCG +
Preference number: 4 (lower is better)
Translates to: LCHILYNKSEHGTADPLWHHTLS*ARPRPA
Trigger: CGCCGGTCGCGGTCGGGCTCAGCTCAGTGTGTGGTG...CCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATGACACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334192.8
CDS-3UTR TCA 90 bp GTGACCAAGGGTAATGCGAGTCTGTGTCTTCCTTGCCCATGCTGCTCCCCACAGGTCATCCAGCCGTCGTaGAGCAGAAGACAAGAGACC +
Preference number: 4 (lower is better)
Translates to: VTKGNASLCLPCPCCSPQVIQPS*SRRQET
Trigger: GGTCTCTTGTCTTCTGCTTCACGACGGCTGGATGAC...CTGTGGGGAGCAGCATGGGCAAGGAAGACACAGACTCGCATTACCCTTGGTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327921.13
CDS-3UTR GCA 90 bp GTGACCAAGGGTAATGCGAGTCTGTGTCTTCCTTGCCCATGCTGCTCCCCACAGCTCTGGAATCCCCATTaGTTTCCCTTCGACCCCCAG +
Preference number: 4 (lower is better)
Translates to: VTKGNASLCLPCPCCSPQLWNPH*FPFDPQ
Trigger: CTGGGGGTCGAAGGGAAAGCAATGGGGATTCCAGAG...CTGTGGGGAGCAGCATGGGCAAGGAAGACACAGACTCGCATTACCCTTGGTCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp GTGACCAAGGGTAATGCGAGTCTGTGTCTTCCTTGCCCATGCTGCTCCCCACAGTCCCAGAGAGTGGCATaGTTGTCATGCCCACAGGTC +
Preference number: 4 (lower is better)
Translates to: VTKGNASLCLPCPCCSPQSQRVA*LSCPQV
Trigger: GACCTGTGGGCATGACAAGCATGCCACTCTCTGGGA...CTGTGGGGAGCAGCATGGGCAAGGAAGACACAGACTCGCATTACCCTTGGTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp TGTGAAGAGGCTGACCGCATCTGGTTAGGCAGGACGGTGTCACTGAAACTTGGACTTCCTTGCCCATGCTaGTCCCCACAGCTCTCGGTG +
Preference number: 4 (lower is better)
Translates to: CEEADRIWLGRTVSLKLGLPCPC*SPQLSV
Trigger: CACCGAGAGCTGTGGGGAGCAGCATGGGCAAGGAAG...TCCAAGTTTCAGTGACACCGTCCTGCCTAACCAGATGCGGTCAGCCTCTTCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CCA 90 bp TTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGCGCCCGCTGACATGGAAGAGCTGCTGGTaGAGCCTGTGCGATTCCGGT +
Preference number: 4 (lower is better)
Translates to: LYNKSEHGTADPLWRPLTWKSCW*SLCDSG
Trigger: ACCGGAATCGCACAGGCTCCACCAGCAGCTCTTCCA...TGTCAGCGGGCGCCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CCA 90 bp TTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGCGCCCGCTGACACCCCACAGCTCTCGGTaGGTACTAAATGACGCGCCA +
Preference number: 4 (lower is better)
Translates to: LYNKSEHGTADPLWRPLTPHSSR*VLNDAP
Trigger: TGGCGCGTCATTTAGTACCCACCGAGAGCTGTGGGG...TGTCAGCGGGCGCCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR TCA 90 bp GCTGGCACAGCAGTTTCTTTCCTGACCCCGGAGGGGGATGGTAGAGAGCCAGTACAGCTAGAGCTGATTTaGGCAGCTGGATGTCGTCTT +
Preference number: 4 (lower is better)
Translates to: AGTAVSFLTPEGDGREPVQLELI*AAGCRL
Trigger: AAGACGACATCCAGCTGCTCAAATCAGCTCTAGCTG...TACTGGCTCTCTACCATCCCCCTCCGGGGTCAGGAAAGAAACTGCTGTGCCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555096.5
CDS-3UTR TCA 90 bp GCTGGAATGACCCGAGCACTTGCCCACTCGCGTGTACTTCCTCCCGTTGTCACTCAAGAACTGAGATTTTaGGGCATGGATGGCCAGTCC +
Preference number: 4 (lower is better)
Translates to: AGMTRALAHSRVLPPVVTQELRF*GMDGQS
Trigger: GGACTGGCCATCCATGCCTCAAAATCTCAGTTCTTG...AGTGACAACGGGAGGAAGTACACGCGAGTGGGCAAGTGCTCGGGTCATTCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557313.5
CDS-3UTR TCA 90 bp TTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGCGCCCGCTGACACAAACCACCTCCCAGTaGGTGTTCCGACTGCAACCA +
Preference number: 4 (lower is better)
Translates to: LYNKSEHGTADPLWRPLTQTTSQ*VFRLQP
Trigger: TGGTTGCAGTCGGAACACTCACTGGGAGGTGGTTTG...TGTCAGCGGGCGCCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR TCA 90 bp TGTGAAGAGGCTGACCGCATCTGGTTAGGCAGGACGGTGTCACTGAAACTTGGACTGCGAGCAGGGGTATaGGAAGAGGTGCACTTTGCC +
Preference number: 4 (lower is better)
Translates to: CEEADRIWLGRTVSLKLGLRAGV*EEVHFA
Trigger: GGCAAAGTGCACCTCTTCTCATACCCCTGCTCGCAG...TCCAAGTTTCAGTGACACCGTCCTGCCTAACCAGATGCGGTCAGCCTCTTCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR TCA 90 bp TGTGAAGAGGCTGACCGCATCTGGTTAGGCAGGACGGTGTCACTGAAACTTGGAGGAAGTCCCCCGTGTTaGGGACTCGACGCAGCTAAA +
Preference number: 4 (lower is better)
Translates to: CEEADRIWLGRTVSLKLGGSPPC*GLDAAK
Trigger: TTTAGCTGCGTCGAGTCCTCAACACGGGGGACTTCC...TCCAAGTTTCAGTGACACCGTCCTGCCTAACCAGATGCGGTCAGCCTCTTCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649352.1
CDS-3UTR GCA 90 bp TTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGCGCCCGCTGACAACGTGTCGTACAGGCTaGTGTAGCTGGAGAAGCCGT +
Preference number: 4 (lower is better)
Translates to: LYNKSEHGTADPLWRPLTTCRTG*CSWRSR
Trigger: ACGGCTTCTCCAGCTACAGCAGCCTGTACGACACGT...TGTCAGCGGGCGCCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262233.11
ENST00000334192.8
CDS-3UTR GCA 90 bp GCTGGCACAGCAGTTTCTTTCCTGACCCCGGAGGGGGATGGTAGAGAGCCAGTATGGATGTCGTCTTCTTaGATCTGGACTCTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: AGTAVSFLTPEGDGREPVWMSSS*IWTLCS
Trigger: GGAGCAGAGAGTCCAGATGCAAGAAGACGACATCCA...TACTGGCTCTCTACCATCCCCCTCCGGGGTCAGGAAAGAAACTGCTGTGCCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555096.5
CDS-3UTR GCA 90 bp TTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGCGCCCGCTGACAAATGACCCGAGCACTTaGCCACTCGCGTGTACTTCC +
Preference number: 4 (lower is better)
Translates to: LYNKSEHGTADPLWRPLTNDPST*PLACTS
Trigger: GGAAGTACACGCGAGTGGGCAAGTGCTCGGGTCATT...TGTCAGCGGGCGCCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp TTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGCGCCCGCTGACACTTGGAGCCCTGAACTaGGAGCAGGGGTATGAGAAG +
Preference number: 4 (lower is better)
Translates to: LYNKSEHGTADPLWRPLTLGALN*EQGYEK
Trigger: CTTCTCATACCCCTGCTCGCAGTTCAGGGCTCCAAG...TGTCAGCGGGCGCCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CCA 90 bp GTGACCAAGGGTAATGCGAGTCTGTGTCTTCCTTGCCCATGCTGCTCCCCACAGCAGGGTCTGCATCAGTaGTCTTGCTTTGGTAGGTCC +
Preference number: 4 (lower is better)
Translates to: VTKGNASLCLPCPCCSPQQGLHQ*SCFGRS
Trigger: GGACCTACCAAAGCAAGACCACTGATGCAGACCCTG...CTGTGGGGAGCAGCATGGGCAAGGAAGACACAGACTCGCATTACCCTTGGTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CCA 90 bp TCCCAGCTTAACATGGTGGAAGGAGCACAGATTTTGAGGCCAGCTGGATCCGTGTGGAAGAGCTGCTGGTaGAGCCTGTGCGATTCCGGT +
Preference number: 4 (lower is better)
Translates to: SQLNMVEGAQILRPAGSVWKSCW*SLCDSG
Trigger: ACCGGAATCGCACAGGCTCCACCAGCAGCTCTTCCA...CACGGATCCAGCTGGCCTCAAAATCTGTGCTCCTTCCACCATGTTAAGCTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557741.1
CDS-3UTR CCA 90 bp TGTGAAGAGGCTGACCGCATCTGGTTAGGCAGGACGGTGTCACTGAAACTTGGATGGAAGAGCTGCTGGTaGAGCCTGTGCGATTCCGGT +
Preference number: 4 (lower is better)
Translates to: CEEADRIWLGRTVSLKLGWKSCW*SLCDSG
Trigger: ACCGGAATCGCACAGGCTCCACCAGCAGCTCTTCCA...TCCAAGTTTCAGTGACACCGTCCTGCCTAACCAGATGCGGTCAGCCTCTTCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CCA 90 bp TGTGAAGAGGCTGACCGCATCTGGTTAGGCAGGACGGTGTCACTGAAACTTGGAGCCGTAGATGTGGCTTaGAGCCCTGAACTGCGAGCA +
Preference number: 4 (lower is better)
Translates to: CEEADRIWLGRTVSLKLGAVDVA*SPELRA
Trigger: TGCTCGCAGTTCAGGGCTCCAAGCCACATCTACGGC...TCCAAGTTTCAGTGACACCGTCCTGCCTAACCAGATGCGGTCAGCCTCTTCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CCA 90 bp TTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGCGCCCGCTGACAGCCCTTGGTACCTGGTaGAGCCTTTCGAGACTTCTC +
Preference number: 4 (lower is better)
Translates to: LYNKSEHGTADPLWRPLTALGTW*SLSRLL
Trigger: GAGAAGTCTCGAAAGGCTCCACCAGGTACCAAGGGC...TGTCAGCGGGCGCCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CCA 90 bp GTGACCAAGGGTAATGCGAGTCTGTGTCTTCCTTGCCCATGCTGCTCCCCACAGAAAAGCAGCTGCCCTTaGTACCTGGTGGAGCCTTTC +
Preference number: 4 (lower is better)
Translates to: VTKGNASLCLPCPCCSPQKSSCP*YLVEPF
Trigger: GAAAGGCTCCACCAGGTACCAAGGGCAGCTGCTTTT...CTGTGGGGAGCAGCATGGGCAAGGAAGACACAGACTCGCATTACCCTTGGTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CCA 90 bp CTGTGTCATATATTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGGGGGCCCTAGCTGTGTaGGAGGCTCCCCAGTGCCTG +
Preference number: 4 (lower is better)
Translates to: LCHILYNKSEHGTADPLWGALAV*EAPQCL
Trigger: CAGGCACTGGGGAGCCTCCCACACAGCTAGGGCCCC...CCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATGACACAG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000327921.13
CDS-3UTR CCA 90 bp TTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGCGCCCGCTGACAAACCTTCGCTCACACTaGGCCAGAGAGGCTATCCTG +
Preference number: 4 (lower is better)
Translates to: LYNKSEHGTADPLWRPLTNLRSH*AREAIL
Trigger: CAGGATAGCCTCTCTGGCCCAGTGTGAGCGAAGGTT...TGTCAGCGGGCGCCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649352.1
CDS-3UTR TCA 90 bp TCTTTCCTGACCCCGGAGGGGGATGGTAGAGAGCCAGTAGGTTTCTTTGGTAACGACTCTCTGCTCCAGTaGAGCAATGCGGTCTGTCAC +
Preference number: 4 (lower is better)
Translates to: SFLTPEGDGREPVGFFGNDSLLQ*SNAVCH
Trigger: GTGACAGACCGCATTGCTTCACTGGAGCAGAGAGTC...GTTACCAAAGAAACCTACTGGCTCTCTACCATCCCCCTCCGGGGTCAGGAAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555096.5
CDS-3UTR TCA 90 bp GCTGGCACAGCAGTTTCTTTCCTGACCCCGGAGGGGGATGGTAGAGAGCCAGTAACACAGTGCCATTGTTaGCCGTGGTTCTTAAAGGCA +
Preference number: 4 (lower is better)
Translates to: AGTAVSFLTPEGDGREPVTQCHC*PWFLKA
Trigger: TGCCTTTAAGAACCACGGTCAACAATGGCACTGTGT...TACTGGCTCTCTACCATCCCCCTCCGGGGTCAGGAAAGAAACTGCTGTGCCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555096.5
CDS-3UTR TCA 90 bp CATATATTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGCGCCCGCAGCAGTTTCTTTCCTaGCCCCGGAGGGGGATGGTA +
Preference number: 4 (lower is better)
Translates to: HILYNKSEHGTADPLWRPQQFLS*PRRGMV
Trigger: TACCATCCCCCTCCGGGGTCAGGAAAGAAACTGCTG...CGGGCGCCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR TCA 90 bp CTGTGTCATATATTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGTCCCAGACGGGACGGTaGCCCACAGCGTCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: LCHILYNKSEHGTADPLWSQTGR*PTASQR
Trigger: TCTCTGGGACGCTGTGGGTCACCGTCCCGTCTGGGA...CCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATGACACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp GTGACCAAGGGTAATGCGAGTCTGTGTCTTCCTTGCCCATGCTGCTCCCCACAGTGGATGTCGTCTTCTTaGATCTGGACTCTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: VTKGNASLCLPCPCCSPQWMSSS*IWTLCS
Trigger: GGAGCAGAGAGTCCAGATGCAAGAAGACGACATCCA...CTGTGGGGAGCAGCATGGGCAAGGAAGACACAGACTCGCATTACCCTTGGTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp GTGACCAAGGGTAATGCGAGTCTGTGTCTTCCTTGCCCATGCTGCTCCCCACAGTACAAAGTGCAAAAATaGCACCCTCATGGGCCCCCT +
Preference number: 4 (lower is better)
Translates to: VTKGNASLCLPCPCCSPQYKVQK*HPHGPP
Trigger: AGGGGGCCCATGAGGGTGGCATTTTTGCACTTTGTA...CTGTGGGGAGCAGCATGGGCAAGGAAGACACAGACTCGCATTACCCTTGGTCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp GTGACCAAGGGTAATGCGAGTCTGTGTCTTCCTTGCCCATGCTGCTCCCCACAGCCTGACAGAGTGCCCTaGAGGACAAAGTTTCGAGTT +
Preference number: 4 (lower is better)
Translates to: VTKGNASLCLPCPCCSPQPDRVP*RTKFRV
Trigger: AACTCGAAACTTTGTCCTGCAGGGCACTCTGTCAGG...CTGTGGGGAGCAGCATGGGCAAGGAAGACACAGACTCGCATTACCCTTGGTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp TTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGCGCCCGCTGACAAGTCCCCTGACAGAGTaGCCTGCAGGACAAAGTTTC +
Preference number: 4 (lower is better)
Translates to: LYNKSEHGTADPLWRPLTSPLTE*PAGQSF
Trigger: GAAACTTTGTCCTGCAGGGCACTCTGTCAGGGGACT...TGTCAGCGGGCGCCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp TGTGAAGAGGCTGACCGCATCTGGTTAGGCAGGACGGTGTCACTGAAACTTGGATCCCAGAGAGTGGCATaGTTGTCATGCCCACAGGTC +
Preference number: 4 (lower is better)
Translates to: CEEADRIWLGRTVSLKLGSQRVA*LSCPQV
Trigger: GACCTGTGGGCATGACAAGCATGCCACTCTCTGGGA...TCCAAGTTTCAGTGACACCGTCCTGCCTAACCAGATGCGGTCAGCCTCTTCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp TTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGCGCCCGCTGACACCGGAAGCAAGTGCCTaGCTCTTTGTAGTCAGATGG +
Preference number: 4 (lower is better)
Translates to: LYNKSEHGTADPLWRPLTPEASA*LFVVRW
Trigger: CCATCTGACTACAAAGAGGCAGGCACTTGCTTCCGG...TGTCAGCGGGCGCCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327921.13
CDS-3UTR CCA 90 bp CATATATTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGCGCCCGCACTGGAAGAGCTGCTaGTGGAGCCTGTGCGATTCC +
Preference number: 4 (lower is better)
Translates to: HILYNKSEHGTADPLWRPHWKSC*WSLCDS
Trigger: GGAATCGCACAGGCTCCACCAGCAGCTCTTCCAGTG...CGGGCGCCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CCA 90 bp GTGACCAAGGGTAATGCGAGTCTGTGTCTTCCTTGCCCATGCTGCTCCCCACAGAGAGCACATGGTCGTTaGAGTCATCCACAGCACAGA +
Preference number: 4 (lower is better)
Translates to: VTKGNASLCLPCPCCSPQRAHGR*SHPQHR
Trigger: TCTGTGCTGTGGATGACTCCAACGACCATGTGCTCT...CTGTGGGGAGCAGCATGGGCAAGGAAGACACAGACTCGCATTACCCTTGGTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CCA 90 bp CATATATTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGCGCCCGCAGCGTCCCAGAGAGTaGCATGCTTGTCATGCCCAC +
Preference number: 4 (lower is better)
Translates to: HILYNKSEHGTADPLWRPQRPRE*HACHAH
Trigger: GTGGGCATGACAAGCATGCCACTCTCTGGGACGCTG...CGGGCGCCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CCA 90 bp GTGACCAAGGGTAATGCGAGTCTGTGTCTTCCTTGCCCATGCTGCTCCCCACAGGGTGTCACTGAAACTTaGAAACGCCTGTGTACCCTG +
Preference number: 4 (lower is better)
Translates to: VTKGNASLCLPCPCCSPQGVTET*KRLCTL
Trigger: CAGGGTACACAGGCGTTTCCAAGTTTCAGTGACACC...CTGTGGGGAGCAGCATGGGCAAGGAAGACACAGACTCGCATTACCCTTGGTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CCA 90 bp CATATATTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGCGCCCGCGTGTGAACAAGGGATaGGGGATGCAAGCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: HILYNKSEHGTADPLWRPRVNKG*GMQARW
Trigger: CCACCTGGCTTGCATCCCCCATCCCTTGTTCACACG...CGGGCGCCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CCA 90 bp GTGACCAAGGGTAATGCGAGTCTGTGTCTTCCTTGCCCATGCTGCTCCCCACAGGAGGAGGAGAGAACATaGTCACACACCCCATCTGTA +
Preference number: 4 (lower is better)
Translates to: VTKGNASLCLPCPCCSPQEEERT*SHTPSV
Trigger: TACAGATGGGGTGTGTGACCATGTTCTCTCCTCCTC...CTGTGGGGAGCAGCATGGGCAAGGAAGACACAGACTCGCATTACCCTTGGTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327921.13
CDS-3UTR CCA 90 bp TTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGCGCCCGCTGACAATCCCACTTCCCTCGTaGCCATTAAGCAAGATGGGC +
Preference number: 4 (lower is better)
Translates to: LYNKSEHGTADPLWRPLTIPLPS*PLSKMG
Trigger: GCCCATCTTGCTTAATGGCCACGAGGGAAGTGGGAT...TGTCAGCGGGCGCCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327921.13
CDS-3UTR TCA 90 bp CATATATTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGCGCCCGGACTCTCTGCTCCAGTaGAGCAATGCGGTCTGTCAC +
Preference number: 4 (lower is better)
Translates to: HILYNKSEHGTADPLWRPDSLLQ*SNAVCH
Trigger: GTGACAGACCGCATTGCTTCACTGGAGCAGAGAGTC...CGGGCGCCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR TCA 90 bp TTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGCGCCCGCTGACACAGCTAGAGCTGATTTaGGCAGCTGGATGTCGTCTT +
Preference number: 4 (lower is better)
Translates to: LYNKSEHGTADPLWRPLTQLELI*AAGCRL
Trigger: AAGACGACATCCAGCTGCTCAAATCAGCTCTAGCTG...TGTCAGCGGGCGCCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR TCA 90 bp TTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGCGCCCGCTGACAGTCCTGTTGCTATCGTaGTCCGATCAGGATGAACTG +
Preference number: 4 (lower is better)
Translates to: LYNKSEHGTADPLWRPLTVLLLS*SDQDEL
Trigger: CAGTTCATCCTGATCGGATCACGATAGCAACAGGAC...TGTCAGCGGGCGCCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR TCA 90 bp GTGACCAAGGGTAATGCGAGTCTGTGTCTTCCTTGCCCATGCTGCTCCCCACAGCCACAGGTCAAGAACTaGGATTTTGAGGCATGGATG +
Preference number: 4 (lower is better)
Translates to: VTKGNASLCLPCPCCSPQPQVKN*DFEAWM
Trigger: CATCCATGCCTCAAAATCTCAGTTCTTGACCTGTGG...CTGTGGGGAGCAGCATGGGCAAGGAAGACACAGACTCGCATTACCCTTGGTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR TCA 90 bp CATATATTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGCGCCCGCTGAGGCCTGAGCCCTaGAGGATTTTGGGCTTTGGT +
Preference number: 4 (lower is better)
Translates to: HILYNKSEHGTADPLWRPLRPEP*RILGFG
Trigger: ACCAAAGCCCAAAATCCTTCAGGGCTCAGGCCTCAG...CGGGCGCCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327921.13
CDS-3UTR TCA 90 bp CATATATTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGCGCCCGTTTAGCCCTGAGGCCTaGGCCCTGAAGGATTTTGGG +
Preference number: 4 (lower is better)
Translates to: HILYNKSEHGTADPLWRPFSPEA*ALKDFG
Trigger: CCCAAAATCCTTCAGGGCTCAGGCCTCAGGGCTAAA...CGGGCGCCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327921.13
CDS-3UTR GCA 90 bp CAAGAAGGTGGCAAAATGTCTCACCGTGAATCAGGGCGTGTGAACAAGGGATGGACGTGTCGTACAGGCTaGTGTAGCTGGAGAAGCCGT +
Preference number: 4 (lower is better)
Translates to: QEGGKMSHRESGRVNKGWTCRTG*CSWRSR
Trigger: ACGGCTTCTCCAGCTACAGCAGCCTGTACGACACGT...CCATCCCTTGTTCACACGCCCTGATTCACGGTGAGACATTTTGCCACCTTCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262233.11
ENST00000334192.8
CDS-3UTR GCA 90 bp CATATATTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGCGCCCGGGTCTGTCACCTCCATaGTACTTGCAGCAGAAGCGC +
Preference number: 4 (lower is better)
Translates to: HILYNKSEHGTADPLWRPGLSPP*YLQQKR
Trigger: GCGCTTCTGCTGCAAGTAGCATGGAGGTGACAGACC...CGGGCGCCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp GCAGTTTCTTTCCTGACCCCGGAGGGGGATGGTAGAGAGCCAGTAGGTTTCTTTTGCATCTGGACTCTCTaGTCCAGTGAAGCAATGCGG +
Preference number: 4 (lower is better)
Translates to: AVSFLTPEGDGREPVGFFCIWTL*SSEAMR
Trigger: CCGCATTGCTTCACTGGAGCAGAGAGTCCAGATGCA...AAAGAAACCTACTGGCTCTCTACCATCCCCCTCCGGGGTCAGGAAAGAAACTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000555096.5
CDS-3UTR GCA 90 bp TTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGCGCCCGCTGACATGGATGTCGTCTTCTTaGATCTGGACTCTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: LYNKSEHGTADPLWRPLTWMSSS*IWTLCS
Trigger: GGAGCAGAGAGTCCAGATGCAAGAAGACGACATCCA...TGTCAGCGGGCGCCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp TGTGAAGAGGCTGACCGCATCTGGTTAGGCAGGACGGTGTCACTGAAACTTGGAAGTCCCCTGACAGAGTaGCCTGCAGGACAAAGTTTC +
Preference number: 4 (lower is better)
Translates to: CEEADRIWLGRTVSLKLGSPLTE*PAGQSF
Trigger: GAAACTTTGTCCTGCAGGGCACTCTGTCAGGGGACT...TCCAAGTTTCAGTGACACCGTCCTGCCTAACCAGATGCGGTCAGCCTCTTCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp CATATATTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGCGCCCGAATGACCCGAGCACTTaGCCACTCGCGTGTACTTCC +
Preference number: 4 (lower is better)
Translates to: HILYNKSEHGTADPLWRPNDPST*PLACTS
Trigger: GGAAGTACACGCGAGTGGGCAAGTGCTCGGGTCATT...CGGGCGCCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp TTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGCGCCCGCTGACAAGAAGAGGTGCACTTTaGCAAAGTCGTCGCCTGTTG +
Preference number: 4 (lower is better)
Translates to: LYNKSEHGTADPLWRPLTRRGAL*QSRRLL
Trigger: CAACAGGCGACGACTTTGGCAAAGTGCACCTCTTCT...TGTCAGCGGGCGCCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp CATATATTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGCGCCCGCTTGGAGCCCTGAACTaGGAGCAGGGGTATGAGAAG +
Preference number: 4 (lower is better)
Translates to: HILYNKSEHGTADPLWRPLGALN*EQGYEK
Trigger: CTTCTCATACCCCTGCTCGCAGTTCAGGGCTCCAAG...CGGGCGCCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp CTGTGTCATATATTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGACCTCCTGGGGTCTTTaGAGCCTGTGCTCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: LCHILYNKSEHGTADPLWTSWGL*SLCSRG
Trigger: GCCCCTGGAGCACAGGCTGCAAAGACCCCAGGAGGT...CCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATGACACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327921.13
CDS-3UTR GCA 90 bp CATATATTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGCGCCCGCAGGCTCCTGCTTTCTaGCACAAGATCCTGCGCATC +
Preference number: 4 (lower is better)
Translates to: HILYNKSEHGTADPLWRPQAPAF*HKILRI
Trigger: GATGCGCAGGATCTTGTGGCAGAAAGCAGGAGCCTG...CGGGCGCCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327921.13
CDS-3UTR GCA 90 bp ACCCGAGCACTTGCCCACTCGCGTGTACTTCCTCCCGTTGTCACTAACGCCATAAGTGAGTGTTCCGACTaGAACCACAGACCCTCTATT +
Preference number: 4 (lower is better)
Translates to: TRALAHSRVLPPVVTNAISECSD*NHRPSI
Trigger: AATAGAGGGTCTGTGGTTGCAGTCGGAACACTCACT...TATGGCGTTAGTGACAACGGGAGGAAGTACACGCGAGTGGGCAAGTGCTCGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557313.5
CDS-3UTR CCA 90 bp GTGACCAAGGGTAATGCGAGTCTGTGTCTTCCTTGCCCATGCTGCTCCCCACAGTCGTCTTCTTGCATCTaGACTCTCTGCTCCAGTGAA +
Preference number: 4 (lower is better)
Translates to: VTKGNASLCLPCPCCSPQSSSCI*TLCSSE
Trigger: TTCACTGGAGCAGAGAGTCCAGATGCAAGAAGACGA...CTGTGGGGAGCAGCATGGGCAAGGAAGACACAGACTCGCATTACCCTTGGTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CCA 90 bp TGTGAAGAGGCTGACCGCATCTGGTTAGGCAGGACGGTGTCACTGAAACTTGGATTGGTGTCCGTGGGGTaGAAATCCGCAGCAAACACA +
Preference number: 4 (lower is better)
Translates to: CEEADRIWLGRTVSLKLGLVSVG*KSAANT
Trigger: TGTGTTTGCTGCGGATTTCCACCCCACGGACACCAA...TCCAAGTTTCAGTGACACCGTCCTGCCTAACCAGATGCGGTCAGCCTCTTCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CCA 90 bp GTGACCAAGGGTAATGCGAGTCTGTGTCTTCCTTGCCCATGCTGCTCCCCACAGCTCTCTGCAGGTTTATaGTACGCTCGAGAGAGATCT +
Preference number: 4 (lower is better)
Translates to: VTKGNASLCLPCPCCSPQLSAGL*YARERS
Trigger: AGATCTCTCTCGAGCGTACCATAAACCTGCAGAGAG...CTGTGGGGAGCAGCATGGGCAAGGAAGACACAGACTCGCATTACCCTTGGTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CCA 90 bp GTGACCAAGGGTAATGCGAGTCTGTGTCTTCCTTGCCCATGCTGCTCCCCACAGATACATGGTGTTTACTaGTGCCCTGCACTTCTGCAG +
Preference number: 4 (lower is better)
Translates to: VTKGNASLCLPCPCCSPQIHGVY*CPALLQ
Trigger: CTGCAGAAGTGCAGGGCACCAGTAAACACCATGTAT...CTGTGGGGAGCAGCATGGGCAAGGAAGACACAGACTCGCATTACCCTTGGTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CCA 90 bp CATATATTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGCGCCCGACCTATCTGTGGGGATaGCCTGTGACCGCTCTGCAT +
Preference number: 4 (lower is better)
Translates to: HILYNKSEHGTADPLWRPTYLWG*PVTALH
Trigger: ATGCAGAGCGGTCACAGGCCATCCCCACAGATAGGT...CGGGCGCCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327921.13
CDS-3UTR CCA 90 bp CATATATTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGCGCCCGATGCGCGGGGGTGTGTaGGGAAGTGTGAAAGTCTGT +
Preference number: 4 (lower is better)
Translates to: HILYNKSEHGTADPLWRPMRGGV*GSVKVC
Trigger: ACAGACTTTCACACTTCCCCACACACCCCCGCGCAT...CGGGCGCCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327921.13
CDS-3UTR CCA 90 bp TTAAACAAAACAGAAATCACAGTGACCAAGGGTAATGCGAGTCTGTGTCTTCCTAGCTCTCTGAGGACCTaGGCAGGGCCGGGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: LNKTEITVTKGNASLCLPSSLRT*AGPGRG
Trigger: CCCCCTCCCCGGCCCTGCCCAGGTCCTCAGAGAGCT...AGGAAGACACAGACTCGCATTACCCTTGGTCACTGTGATTTCTGTTTTGTTTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327921.13
CDS-3UTR CCA 90 bp ACAGCAGTTTCTTTCCTGACCCCGGAGGGGGATGGTAGAGAGCCAGTAGGTTTCCAGGGTCTGCATCAGTaGTCTTTGGTAGGTCCTTTC +
Preference number: 4 (lower is better)
Translates to: TAVSFLTPEGDGREPVGFQGLHQ*SLVGPF
Trigger: GAAAGGACCTACCAAAGACCACTGATGCAGACCCTG...GAAACCTACTGGCTCTCTACCATCCCCCTCCGGGGTCAGGAAAGAAACTGCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555096.5
CDS-3UTR TCA 90 bp CATATATTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGCGCCCGGTGATCCGATCAGGATaGACTGCTAGGCACTTCACG +
Preference number: 4 (lower is better)
Translates to: HILYNKSEHGTADPLWRPVIRSG*TARHFT
Trigger: CGTGAAGTGCCTAGCAGTTCATCCTGATCGGATCAC...CGGGCGCCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR TCA 90 bp TTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGCGCCCGCTGACACCACAGGTCAAGAACTaGGATTTTGAGGCATGGATG +
Preference number: 4 (lower is better)
Translates to: LYNKSEHGTADPLWRPLTPQVKN*DFEAWM
Trigger: CATCCATGCCTCAAAATCTCAGTTCTTGACCTGTGG...TGTCAGCGGGCGCCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR TCA 90 bp ACCCGAGCACTTGCCCACTCGCGTGTACTTCCTCCCGTTGTCACTAACGCCATACATCTGTGTGAACGGTaGCCAAGTCTTTTGTTTCTG +
Preference number: 4 (lower is better)
Translates to: TRALAHSRVLPPVVTNAIHLCER*PSLLFL
Trigger: CAGAAACAAAAGACTTGGTCACCGTTCACACAGATG...TATGGCGTTAGTGACAACGGGAGGAAGTACACGCGAGTGGGCAAGTGCTCGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557313.5
CDS-3UTR TCA 90 bp GTGACCAAGGGTAATGCGAGTCTGTGTCTTCCTTGCCCATGCTGCTCCCCACAGTCGTTTCCATCTGTGTaGACGGTGACCAAGTCTTTT +
Preference number: 4 (lower is better)
Translates to: VTKGNASLCLPCPCCSPQSFPSV*TVTKSF
Trigger: AAAAGACTTGGTCACCGTTCACACAGATGGAAACGA...CTGTGGGGAGCAGCATGGGCAAGGAAGACACAGACTCGCATTACCCTTGGTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR TCA 90 bp TTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGCGCCCGCTGACAAGTCAGATGGCATTTTaGTGGAGAATTGCCTGGGGT +
Preference number: 4 (lower is better)
Translates to: LYNKSEHGTADPLWRPLTSQMAF*WRIAWG
Trigger: ACCCCAGGCAATTCTCCATCAAAATGCCATCTGACT...TGTCAGCGGGCGCCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327921.13
CDS-3UTR GCA 90 bp CATATATTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGCGCCCGTGCATCTGGACTCTCTaGTCCAGTGAAGCAATGCGG +
Preference number: 4 (lower is better)
Translates to: HILYNKSEHGTADPLWRPCIWTL*SSEAMR
Trigger: CCGCATTGCTTCACTGGAGCAGAGAGTCCAGATGCA...CGGGCGCCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp TTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGCGCCCGCTGACACTGTTAAGCACGGCCTaGTGTTCCTCAGTAATGTTC +
Preference number: 4 (lower is better)
Translates to: LYNKSEHGTADPLWRPLTLLSTA*CSSVMF
Trigger: GAACATTACTGAGGAACAGCAGGCCGTGCTTAACAG...TGTCAGCGGGCGCCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp AAGTCAGTTAGGAGTAGAGTCTGCTTAGCACAAGAGGGATACAAGCCCTCTCTCTGCTGGTGGAGCCTGTaGGATTCCGGTTTCCTCTGG +
Preference number: 4 (lower is better)
Translates to: KSVRSRVCLAQEGYKPSLCWWSL*DSGFLW
Trigger: CCAGAGGAAACCGGAATCGCACAGGCTCCACCAGCA...GAGAGAGGGCTTGTATCCCTCTTGTGCTAAGCAGACTCTACTCCTAACTGACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp GTGACCAAGGGTAATGCGAGTCTGTGTCTTCCTTGCCCATGCTGCTCCCCACAGCAGGCTCCTTGGGTTTaGTTTCACTGTTCTTTTTGC +
Preference number: 4 (lower is better)
Translates to: VTKGNASLCLPCPCCSPQQAPWV*FHCSFC
Trigger: GCAAAAAGAACAGTGAAAGCAAACCCAAGGAGCCTG...CTGTGGGGAGCAGCATGGGCAAGGAAGACACAGACTCGCATTACCCTTGGTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp GTGACCAAGGGTAATGCGAGTCTGTGTCTTCCTTGCCCATGCTGCTCCCCACAGATGGGCCCCCTGAACTaGATAGCTTATTCGATTTGT +
Preference number: 4 (lower is better)
Translates to: VTKGNASLCLPCPCCSPQMGPLN*IAYSIC
Trigger: ACAAATCGAATAAGCTATGCAGTTCAGGGGGCCCAT...CTGTGGGGAGCAGCATGGGCAAGGAAGACACAGACTCGCATTACCCTTGGTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp GTGACCAAGGGTAATGCGAGTCTGTGTCTTCCTTGCCCATGCTGCTCCCCACAGCTCCCGACACCAGTGTaGCATCTCTTAACATACAAA +
Preference number: 4 (lower is better)
Translates to: VTKGNASLCLPCPCCSPQLPTPV*HLLTYK
Trigger: TTTGTATGTTAAGAGATGGCACACTGGTGTCGGGAG...CTGTGGGGAGCAGCATGGGCAAGGAAGACACAGACTCGCATTACCCTTGGTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp GCCTTCTGGCCACACTCCAAAAACATGGAATCCCAAAGTGCAGGTATAGGTAGCTCCCAGAGAGTGGCATaGTTGTCATGCCCACAGGTC +
Preference number: 4 (lower is better)
Translates to: AFWPHSKNMESQSAGIGSSQRVA*LSCPQV
Trigger: GACCTGTGGGCATGACAAGCATGCCACTCTCTGGGA...GCTACCTATACCTGCACTTTGGGATTCCATGTTTTTGGAGTGTGGCCAGAAGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557313.5
CDS-3UTR GCA 90 bp CGTAGTCTCCGGAATTTGACACGAGGAACTGTGAGTTTACAGACCAGTCCAGGTAATGACCCGAGCACTTaGCCACTCGCGTGTACTTCC +
Preference number: 4 (lower is better)
Translates to: RSLRNLTRGTVSLQTSPGNDPST*PLACTS
Trigger: GGAAGTACACGCGAGTGGGCAAGTGCTCGGGTCATT...ACCTGGACTGGTCTGTAAACTCACAGTTCCTCGTGTCAAATTCCGGAGACTACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557313.5
CDS-3UTR GCA 90 bp TGTGAAGAGGCTGACCGCATCTGGTTAGGCAGGACGGTGTCACTGAAACTTGGAGGGTATGAGAAGAGGTaGACTTTGCCAAAGTCGTCG +
Preference number: 4 (lower is better)
Translates to: CEEADRIWLGRTVSLKLGGYEKR*TLPKSS
Trigger: CGACGACTTTGGCAAAGTGCACCTCTTCTCATACCC...TCCAAGTTTCAGTGACACCGTCCTGCCTAACCAGATGCGGTCAGCCTCTTCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp TTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGCGCCCGCTGACAATCTCCCCTGATGAATaGTTCCACGCCATCTGCAAA +
Preference number: 4 (lower is better)
Translates to: LYNKSEHGTADPLWRPLTISPDE*FHAICK
Trigger: TTTGCAGATGGCGTGGAAGCATTCATCAGGGGAGAT...TGTCAGCGGGCGCCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262233.11
ENST00000649352.1
CDS-3UTR GCA 90 bp CTGTGTCATATATTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGGGTCTTTGCAGCCTGTaGTCCAGGGGCCCTAGCTGT +
Preference number: 4 (lower is better)
Translates to: LCHILYNKSEHGTADPLWGLCSL*SRGPSC
Trigger: ACAGCTAGGGCCCCTGGAGCACAGGCTGCAAAGACC...CCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATGACACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327921.13
CDS-3UTR CCA 90 bp GAGCTGGTCCTCTTGATGTTACTTTTGGTTGCTGGCACAGCAGTTTCTTTCCTGACAGGCTGCTGTAGCTaGAGAAGCCGTCCTCCATGC +
Preference number: 4 (lower is better)
Translates to: ELVLLMLLLVAGTAVSFLTGCCS*RSRPPC
Trigger: GCATGGAGGACGGCTTCTCCAGCTACAGCAGCCTGT...CAGGAAAGAAACTGCTGTGCCAGCAACCAAAAGTAACATCAAGAGGACCAGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555096.5
CDS-3UTR CCA 90 bp ACAGCAGTTTCTTTCCTGACCCCGGAGGGGGATGGTAGAGAGCCAGTAGGTTTCGCTGATTTGAGCAGCTaGATGTCGTCTTCTTGCATC +
Preference number: 4 (lower is better)
Translates to: TAVSFLTPEGDGREPVGFADLSS*MSSSCI
Trigger: GATGCAAGAAGACGACATCCAGCTGCTCAAATCAGC...GAAACCTACTGGCTCTCTACCATCCCCCTCCGGGGTCAGGAAAGAAACTGCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555096.5
CDS-3UTR CCA 90 bp AAGTCAGTTAGGAGTAGAGTCTGCTTAGCACAAGAGGGATACAAGCCCTCTCTCCACTGGAAGAGCTGCTaGTGGAGCCTGTGCGATTCC +
Preference number: 4 (lower is better)
Translates to: KSVRSRVCLAQEGYKPSLHWKSC*WSLCDS
Trigger: GGAATCGCACAGGCTCCACCAGCAGCTCTTCCAGTG...GAGAGAGGGCTTGTATCCCTCTTGTGCTAAGCAGACTCTACTCCTAACTGACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CCA 90 bp CAAGAAGGTGGCAAAATGTCTCACCGTGAATCAGGGCGTGTGAACAAGGGATGGAGGAGTTTCTTCTCATaGGCCCGACAGACGGCATTG +
Preference number: 4 (lower is better)
Translates to: QEGGKMSHRESGRVNKGWRSFFS*ARQTAL
Trigger: CAATGCCGTCTGTCGGGCCCATGAGAAGAAACTCCT...CCATCCCTTGTTCACACGCCCTGATTCACGGTGAGACATTTTGCCACCTTCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CCA 90 bp CATATATTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGCGCCCGAGGAGTTTCTTCTCATaGGCCCGACAGACGGCATTG +
Preference number: 4 (lower is better)
Translates to: HILYNKSEHGTADPLWRPRSFFS*ARQTAL
Trigger: CAATGCCGTCTGTCGGGCCCATGAGAAGAAACTCCT...CGGGCGCCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CCA 90 bp TTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGCGCCCGCTGACAAGCCCTGAAGGATTTTaGGCTTTGGTAGCTGTAAGC +
Preference number: 4 (lower is better)
Translates to: LYNKSEHGTADPLWRPLTSPEGF*ALVAVS
Trigger: GCTTACAGCTACCAAAGCCCAAAATCCTTCAGGGCT...TGTCAGCGGGCGCCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327921.13
CDS-3UTR CCA 90 bp CATATATTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGCGCCCGAAGATCCTGCGCATCTaGGTGATGGCAAGTAGGGCA +
Preference number: 4 (lower is better)
Translates to: HILYNKSEHGTADPLWRPKILRI*VMASRA
Trigger: TGCCCTACTTGCCATCACCCAGATGCGCAGGATCTT...CGGGCGCCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327921.13
CDS-3UTR CCA 90 bp AACGTTGCAACCTTGTTGGTATTCAATGTGCACTGTGTCATATATTGTACAACACGCCGCGGCTCACTGTaGCCCACATCCGACCGGCGC +
Preference number: 4 (lower is better)
Translates to: NVATLLVFNVHCVIYCTTRRGSL*PTSDRR
Trigger: GCGCCGGTCGGATGTGGGCCACAGTGAGCCGCGGCG...TGTTGTACAATATATGACACAGTGCACATTGAATACCAACAAGGTTGCAACGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649352.1
CDS-3UTR TCA 90 bp CATATATTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGCGCCCGGTCCTGTTGCTATCGTaGTCCGATCAGGATGAACTG +
Preference number: 4 (lower is better)
Translates to: HILYNKSEHGTADPLWRPVLLLS*SDQDEL
Trigger: CAGTTCATCCTGATCGGATCACGATAGCAACAGGAC...CGGGCGCCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR TCA 90 bp CATATATTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGCGCCCGTTCCGCTCCAAGAAATaGGCTTTCGGTCTTTCCCAC +
Preference number: 4 (lower is better)
Translates to: HILYNKSEHGTADPLWRPFRSKK*AFGLSH
Trigger: GTGGGAAAGACCGAAAGCTCATTTCTTGGAGCGGAA...CGGGCGCCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR TCA 90 bp AGCCTCCCCAAGGGAGAATGCAATGAAACTTTGGAAAATGTAACCAAACACAGTGGGTGTGAAGTCCCCTaGCAGAGTGCCCTGCAGGAC +
Preference number: 4 (lower is better)
Translates to: SLPKGECNETLENVTKHSGCEVP*QSALQD
Trigger: GTCCTGCAGGGCACTCTGTCAGGGGACTTCACACCC...ACTGTGTTTGGTTACATTTTCCAAAGTTTCATTGCATTCTCCCTTGGGGAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR TCA 90 bp CATATATTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGCGCCCGCAAGAACTGAGATTTTaGGGCATGGATGGCCAGTCC +
Preference number: 4 (lower is better)
Translates to: HILYNKSEHGTADPLWRPQELRF*GMDGQS
Trigger: GGACTGGCCATCCATGCCTCAAAATCTCAGTTCTTG...CGGGCGCCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR TCA 90 bp CAATGTGCACTGTGTCATATATTGTACAACAAAAGTGAACACGGAACCGCTGATTCCCAGACGGGACGGTaGCCCACAGCGTCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: QCALCHILYNKSEHGTADSQTGR*PTASQR
Trigger: TCTCTGGGACGCTGTGGGTCACCGTCCCGTCTGGGA...ATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATGACACAGTGCACATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR TCA 90 bp TTAAACAAAACAGAAATCACAGTGACCAAGGGTAATGCGAGTCTGTGTCTTCCTTCCCAGACGGGACGGTaGCCCACAGCGTCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: LNKTEITVTKGNASLCLPSQTGR*PTASQR
Trigger: TCTCTGGGACGCTGTGGGTCACCGTCCCGTCTGGGA...AGGAAGACACAGACTCGCATTACCCTTGGTCACTGTGATTTCTGTTTTGTTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR TCA 90 bp TTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGCGCCCGCTGACAGAAATTCCCATCTGGTaGGTATCGCATTACAGAGAG +
Preference number: 4 (lower is better)
Translates to: LYNKSEHGTADPLWRPLTEIPIW*VSHYRE
Trigger: CTCTCTGTAATGCGATACTCACCAGATGGGAATTTC...TGTCAGCGGGCGCCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR TCA 90 bp AACTTGGAAACGCCTGTGTACCCTGCTGAAATATTGAAGTCAGTTAGGAGTAGACCCGACAGACGGCATTaGTGTCGGTTCCGTCCGAGC +
Preference number: 4 (lower is better)
Translates to: NLETPVYPAEILKSVRSRPDRRH*CRFRPS
Trigger: GCTCGGACGGAACCGACATCAATGCCGTCTGTCGGG...TCTACTCCTAACTGACTTCAATATTTCAGCAGGGTACACAGGCGTTTCCAAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp GGTTTCTTTGGTAACACAGTGCCATTGTTGACCGTGGTTCTTAAAGGCAGGGTCACGTGTCGTACAGGCTaGTGTAGCTGGAGAAGCCGT +
Preference number: 4 (lower is better)
Translates to: GFFGNTVPLLTVVLKGRVTCRTG*CSWRSR
Trigger: ACGGCTTCTCCAGCTACAGCAGCCTGTACGACACGT...GACCCTGCCTTTAAGAACCACGGTCAACAATGGCACTGTGTTACCAAAGAAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555096.5
CDS-3UTR GCA 90 bp GCAGTTTCTTTCCTGACCCCGGAGGGGGATGGTAGAGAGCCAGTAGGTTTCTTTCTGTTAAGCACGGCCTaGTGTTCCTCAGTAATGTTC +
Preference number: 4 (lower is better)
Translates to: AVSFLTPEGDGREPVGFFLLSTA*CSSVMF
Trigger: GAACATTACTGAGGAACAGCAGGCCGTGCTTAACAG...AAAGAAACCTACTGGCTCTCTACCATCCCCCTCCGGGGTCAGGAAAGAAACTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555096.5
CDS-3UTR GCA 90 bp CTGTGTCATATATTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGTGCTGGTGGAGCCTGTaGGATTCCGGTTTCCTCTGG +
Preference number: 4 (lower is better)
Translates to: LCHILYNKSEHGTADPLWCWWSL*DSGFLW
Trigger: CCAGAGGAAACCGGAATCGCACAGGCTCCACCAGCA...CCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATGACACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp CTGTGTCATATATTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGTGCCACTGGAAGAGCTaGTGGTGGAGCCTGTGCGAT +
Preference number: 4 (lower is better)
Translates to: LCHILYNKSEHGTADPLWCHWKS*WWSLCD
Trigger: ATCGCACAGGCTCCACCAGCAGCTCTTCCAGTGGCA...CCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATGACACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp CATATATTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGCGCCCGCGCAACTTGTCCTGTTaGTATCGTGATCCGATCAGG +
Preference number: 4 (lower is better)
Translates to: HILYNKSEHGTADPLWRPRNLSC*YRDPIR
Trigger: CCTGATCGGATCACGATAGCAACAGGACAAGTTGCG...CGGGCGCCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp CAAGAAGGTGGCAAAATGTCTCACCGTGAATCAGGGCGTGTGAACAAGGGATGGCGCAACTTGTCCTGTTaGTATCGTGATCCGATCAGG +
Preference number: 4 (lower is better)
Translates to: QEGGKMSHRESGRVNKGWRNLSC*YRDPIR
Trigger: CCTGATCGGATCACGATAGCAACAGGACAAGTTGCG...CCATCCCTTGTTCACACGCCCTGATTCACGGTGAGACATTTTGCCACCTTCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp CATATATTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGCGCCCGTTCCATCCTTCGATGTaGCCGCAACTTGTCCTGTTG +
Preference number: 4 (lower is better)
Translates to: HILYNKSEHGTADPLWRPFHPSM*PQLVLL
Trigger: CAACAGGACAAGTTGCGGGCACATCGAAGGATGGAA...CGGGCGCCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp GTGACCAAGGGTAATGCGAGTCTGTGTCTTCCTTGCCCATGCTGCTCCCCACAGAGTTTTTCTTCTTTCTaGCAGTCCCATACAGAGAGC +
Preference number: 4 (lower is better)
Translates to: VTKGNASLCLPCPCCSPQSFSSF*QSHTES
Trigger: GCTCTCTGTATGGGACTGGCAGAAAGAAGAAAAACT...CTGTGGGGAGCAGCATGGGCAAGGAAGACACAGACTCGCATTACCCTTGGTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp CATATATTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGCGCCCGCCTGACAGAGTGCCCTaGAGGACAAAGTTTCGAGTT +
Preference number: 4 (lower is better)
Translates to: HILYNKSEHGTADPLWRPPDRVP*RTKFRV
Trigger: AACTCGAAACTTTGTCCTGCAGGGCACTCTGTCAGG...CGGGCGCCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp CAAGAAGGTGGCAAAATGTCTCACCGTGAATCAGGGCGTGTGAACAAGGGATGGTCCACACTTACGACTTaGTTACAGGCAGAGGGAACC +
Preference number: 4 (lower is better)
Translates to: QEGGKMSHRESGRVNKGWSTLTT*LQAEGT
Trigger: GGTTCCCTCTGCCTGTAAGCAAGTCGTAAGTGTGGA...CCATCCCTTGTTCACACGCCCTGATTCACGGTGAGACATTTTGCCACCTTCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp AAGTCAGTTAGGAGTAGAGTCTGCTTAGCACAAGAGGGATACAAGCCCTCTCTCGACAGGAAAAGCAGCTaGCCTTGGTACCTGGTGGAG +
Preference number: 4 (lower is better)
Translates to: KSVRSRVCLAQEGYKPSLDRKSS*PWYLVE
Trigger: CTCCACCAGGTACCAAGGGCAGCTGCTTTTCCTGTC...GAGAGAGGGCTTGTATCCCTCTTGTGCTAAGCAGACTCTACTCCTAACTGACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp CAAGAAGGTGGCAAAATGTCTCACCGTGAATCAGGGCGTGTGAACAAGGGATGGCACCTCCATGCTACTTaGAGCAGAAGCGCTGTCATT +
Preference number: 4 (lower is better)
Translates to: QEGGKMSHRESGRVNKGWHLHAT*SRSAVI
Trigger: AATGACAGCGCTTCTGCTGCAAGTAGCATGGAGGTG...CCATCCCTTGTTCACACGCCCTGATTCACGGTGAGACATTTTGCCACCTTCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649352.1
CDS-3UTR CCA 90 bp TGTGAAGAGGCTGACCGCATCTGGTTAGGCAGGACGGTGTCACTGAAACTTGGATCGTCTTCTTGCATCTaGACTCTCTGCTCCAGTGAA +
Preference number: 4 (lower is better)
Translates to: CEEADRIWLGRTVSLKLGSSSCI*TLCSSE
Trigger: TTCACTGGAGCAGAGAGTCCAGATGCAAGAAGACGA...TCCAAGTTTCAGTGACACCGTCCTGCCTAACCAGATGCGGTCAGCCTCTTCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CCA 90 bp CATATATTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGCGCCCGCCAGATGCGCACATGTaGGGGCAATTGTTTTCCATC +
Preference number: 4 (lower is better)
Translates to: HILYNKSEHGTADPLWRPPDAHM*GQLFSI
Trigger: GATGGAAAACAATTGCCCCCACATGTGCGCATCTGG...CGGGCGCCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CCA 90 bp CAAGAAGGTGGCAAAATGTCTCACCGTGAATCAGGGCGTGTGAACAAGGGATGGAGAGCACATGGTCGTTaGAGTCATCCACAGCACAGA +
Preference number: 4 (lower is better)
Translates to: QEGGKMSHRESGRVNKGWRAHGR*SHPQHR
Trigger: TCTGTGCTGTGGATGACTCCAACGACCATGTGCTCT...CCATCCCTTGTTCACACGCCCTGATTCACGGTGAGACATTTTGCCACCTTCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CCA 90 bp CCACAAGTAACTATGATGTTGGTGTCCGTGGGGTGGAAATCCGCAGCAAACACATTGGTGTCCGTGGGGTaGAAATCCGCAGCAAACACA +
Preference number: 4 (lower is better)
Translates to: PQVTMMLVSVGWKSAANTLVSVG*KSAANT
Trigger: TGTGTTTGCTGCGGATTTCCACCCCACGGACACCAA...TGTGTTTGCTGCGGATTTCCACCCCACGGACACCAACATCATAGTTACTTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554553.5
CDS-3UTR CCA 90 bp GTGACCAAGGGTAATGCGAGTCTGTGTCTTCCTTGCCCATGCTGCTCCCCACAGTGTCATGTGAGCCTATaGCTAAGAAATTCCCATCTG +
Preference number: 4 (lower is better)
Translates to: VTKGNASLCLPCPCCSPQCHVSL*LRNSHL
Trigger: CAGATGGGAATTTCTTAGCCATAGGCTCACATGACA...CTGTGGGGAGCAGCATGGGCAAGGAAGACACAGACTCGCATTACCCTTGGTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CCA 90 bp CTGTGTCATATATTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGGCCGTAGATGTGGCTTaGAGCCCTGAACTGCGAGCA +
Preference number: 4 (lower is better)
Translates to: LCHILYNKSEHGTADPLWAVDVA*SPELRA
Trigger: TGCTCGCAGTTCAGGGCTCCAAGCCACATCTACGGC...CCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATGACACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CCA 90 bp CTGTGTCATATATTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGCGTGTGAACAAGGGATaGGGGATGCAAGCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: LCHILYNKSEHGTADPLWRVNKG*GMQARW
Trigger: CCACCTGGCTTGCATCCCCCATCCCTTGTTCACACG...CCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATGACACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CCA 90 bp CTGTGTCATATATTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGGATTCTGGGACCTCCTaGGGTCTTTGCAGCCTGTGC +
Preference number: 4 (lower is better)
Translates to: LCHILYNKSEHGTADPLWDSGTS*GLCSLC
Trigger: GCACAGGCTGCAAAGACCCCAGGAGGTCCCAGAATC...CCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATGACACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327921.13
CDS-3UTR CCA 90 bp CTGTGTCATATATTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGATCAGCTCCGTGGCCTaGGAGTTCTGCAGAGCAGAG +
Preference number: 4 (lower is better)
Translates to: LCHILYNKSEHGTADPLWISSVA*EFCRAE
Trigger: CTCTGCTCTGCAGAACTCCCAGGCCACGGAGCTGAT...CCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATGACACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327921.13
CDS-3UTR CCA 90 bp TTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGCGCCCGCTGACATTAAGCAAGATGGGCTaGGGATTTCCAAGAAGAGAG +
Preference number: 4 (lower is better)
Translates to: LYNKSEHGTADPLWRPLTLSKMG*GFPRRE
Trigger: CTCTCTTCTTGGAAATCCCCAGCCCATCTTGCTTAA...TGTCAGCGGGCGCCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327921.13
CDS-3UTR CCA 90 bp CATATATTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGCGCCCGACACAGAGAACACTTTaGGAGGCTGAGGTAGGCAGA +
Preference number: 4 (lower is better)
Translates to: HILYNKSEHGTADPLWRPTQRTL*EAEVGR
Trigger: TCTGCCTACCTCAGCCTCCCAAAGTGTTCTCTGTGT...CGGGCGCCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649352.1
CDS-3UTR TCA 90 bp CATATATTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGCGCCCGACACAGTGCCATTGTTaGCCGTGGTTCTTAAAGGCA +
Preference number: 4 (lower is better)
Translates to: HILYNKSEHGTADPLWRPTQCHC*PWFLKA
Trigger: TGCCTTTAAGAACCACGGTCAACAATGGCACTGTGT...CGGGCGCCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR TCA 90 bp AGTCTCATCTGCAAACTACAGTCTCATCTGCAAATGGCCCAGGTGAGAATAAAACCACCACGGATGCGATaGAGTAGACGGTCTCTCCCG +
Preference number: 4 (lower is better)
Translates to: SLICKLQSHLQMAQVRIKPPRMR*SRRSLP
Trigger: CGGGAGAGACCGTCTACTTCATCGCATCCGTGGTGG...TTTTATTCTCACCTGGGCCATTTGCAGATGAGACTGTAGTTTGCAGATGAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262233.11
ENST00000649352.1
CDS-3UTR TCA 90 bp TTTCCACAAGTAACTATGATGTTGGTGTCCGTGGGGTGGAAATCCGCAGCAAACGTGATCCGATCAGGATaGACTGCTAGGCACTTCACG +
Preference number: 4 (lower is better)
Translates to: FPQVTMMLVSVGWKSAANVIRSG*TARHFT
Trigger: CGTGAAGTGCCTAGCAGTTCATCCTGATCGGATCAC...GTTTGCTGCGGATTTCCACCCCACGGACACCAACATCATAGTTACTTGTGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554553.5
CDS-3UTR TCA 90 bp AATTTCTGCCACCTCCGTTTAACGCATCAGAACTCAATCTTATCTCATACTGTATCCCAGACGGGACGGTaGCCCACAGCGTCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: NFCHLRLTHQNSILSHTVSQTGR*PTASQR
Trigger: TCTCTGGGACGCTGTGGGTCACCGTCCCGTCTGGGA...TACAGTATGAGATAAGATTGAGTTCTGATGCGTTAAACGGAGGTGGCAGAAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR TCA 90 bp GGTAGCCCATTCAATGTCTCTTGTAGTTTCCACACTTACGACTTGCTTACAGGCCAAACCACCTCCCAGTaGGTGTTCCGACTGCAACCA +
Preference number: 4 (lower is better)
Translates to: GSPFNVSCSFHTYDLLTGQTTSQ*VFRLQP
Trigger: TGGTTGCAGTCGGAACACTCACTGGGAGGTGGTTTG...GCCTGTAAGCAAGTCGTAAGTGTGGAAACTACAAGAGACATTGAATGGGCTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557313.5
CDS-3UTR TCA 90 bp TGTGAAGAGGCTGACCGCATCTGGTTAGGCAGGACGGTGTCACTGAAACTTGGATCGTTTCCATCTGTGTaGACGGTGACCAAGTCTTTT +
Preference number: 4 (lower is better)
Translates to: CEEADRIWLGRTVSLKLGSFPSV*TVTKSF
Trigger: AAAAGACTTGGTCACCGTTCACACAGATGGAAACGA...TCCAAGTTTCAGTGACACCGTCCTGCCTAACCAGATGCGGTCAGCCTCTTCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR TCA 90 bp GACAAATTTCTGCCACCTCCGTTTAACGCATCAGAACTCAATCTTATCTCATACCCCGACAGACGGCATTaGTGTCGGTTCCGTCCGAGC +
Preference number: 4 (lower is better)
Translates to: DKFLPPPFNASELNLISYPDRRH*CRFRPS
Trigger: GCTCGGACGGAACCGACATCAATGCCGTCTGTCGGG...GTATGAGATAAGATTGAGTTCTGATGCGTTAAACGGAGGTGGCAGAAATTTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR TCA 90 bp AACTTGGAAACGCCTGTGTACCCTGCTGAAATATTGAAGTCAGTTAGGAGTAGATCCCGCCCGTGGAGATaGGGTGGCTGTCTTCACAGA +
Preference number: 4 (lower is better)
Translates to: NLETPVYPAEILKSVRSRSRPWR*GGCLHR
Trigger: TCTGTGAAGACAGCCACCTCATCTCCACGGGCGGGA...TCTACTCCTAACTGACTTCAATATTTCAGCAGGGTACACAGGCGTTTCCAAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR TCA 90 bp TTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGCGCCCGCTGACATCCTTTGTCCATTATTaGGCTTGGCAAACAGGAGTA +
Preference number: 4 (lower is better)
Translates to: LYNKSEHGTADPLWRPLTSFVHY*AWQTGV
Trigger: TACTCCTGTTTGCCAAGCTCAATAATGGACAAAGGA...TGTCAGCGGGCGCCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262233.11
ENST00000649352.1
CDS-3UTR TCA 90 bp CAATTCCTCAACAGCCATCGTGGTTCAGTACCTCATTATCATCATAAATATTTGCCGCTCACCACACACTaGGCTGAGCCCGACCGCGAC +
Preference number: 4 (lower is better)
Translates to: QFLNSHRGSVPHYHHKYLPLTTH*AEPDRD
Trigger: GTCGCGGTCGGGCTCAGCTCAGTGTGTGGTGAGCGG...CAAATATTTATGATGATAATGAGGTACTGAACCACGATGGCTGTTGAGGAATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334192.8
CDS-3UTR TCA 90 bp CATATATTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGCGCCCGAAGAGCTGGTCCTCTTaGTGTTACTTGGTGTCGATC +
Preference number: 4 (lower is better)
Translates to: HILYNKSEHGTADPLWRPKSWSS*CYLVSI
Trigger: GATCGACACCAAGTAACATCAAGAGGACCAGCTCTT...CGGGCGCCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR TCA 90 bp AGACATTTCCAACCAATACTTCCCAGCTTAACATGGTGGAAGGAGCACAGATTTGTTCTAGGGCTTGGGTaGGGGGCTTCACCTCCACCA +
Preference number: 4 (lower is better)
Translates to: RHFQPILPSLTWWKEHRFVLGLG*GASPPP
Trigger: TGGTGGAGGTGAAGCCCCTCACCCAAGCCCTAGAAC...AAATCTGTGCTCCTTCCACCATGTTAAGCTGGGAAGTATTGGTTGGAAATGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557741.1
CDS-3UTR GCA 90 bp GAGCTGGTCCTCTTGATGTTACTTTTGGTTGCTGGCACAGCAGTTTCTTTCCTGCACCTCCATGCTACTTaGAGCAGAAGCGCTGTCATC +
Preference number: 4 (lower is better)
Translates to: ELVLLMLLLVAGTAVSFLHLHAT*SRSAVI
Trigger: GATGACAGCGCTTCTGCTGCAAGTAGCATGGAGGTG...CAGGAAAGAAACTGCTGTGCCAGCAACCAAAAGTAACATCAAGAGGACCAGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555096.5
CDS-3UTR GCA 90 bp CTGTGTCATATATTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGGCTCCAGTGAAGCAATaGGGTCTGTCACCTCCATGC +
Preference number: 4 (lower is better)
Translates to: LCHILYNKSEHGTADPLWAPVKQ*GLSPPC
Trigger: GCATGGAGGTGACAGACCGCATTGCTTCACTGGAGC...CCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATGACACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp CTGCTTCATAGACATTTCCAACCAATACTTCCCAGCTTAACATGGTGGAAGGAGTGCCACTGGAAGAGCTaGTGGTGGAGCCTGTGCGAT +
Preference number: 4 (lower is better)
Translates to: LLHRHFQPILPSLTWWKECHWKS*WWSLCD
Trigger: ATCGCACAGGCTCCACCAGCAGCTCTTCCAGTGGCA...CTCCTTCCACCATGTTAAGCTGGGAAGTATTGGTTGGAAATGTCTATGAAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557741.1
CDS-3UTR GCA 90 bp TTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGCGCCCGCTGACAAGTTTTTCTTCTTTCTaGCAGTCCCATACAGAGAGC +
Preference number: 4 (lower is better)
Translates to: LYNKSEHGTADPLWRPLTSFSSF*QSHTES
Trigger: GCTCTCTGTATGGGACTGGCAGAAAGAAGAAAAACT...TGTCAGCGGGCGCCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp TGTGAAGAGGCTGACCGCATCTGGTTAGGCAGGACGGTGTCACTGAAACTTGGACTCCCGACACCAGTGTaGCATCTCTTAACATACAAA +
Preference number: 4 (lower is better)
Translates to: CEEADRIWLGRTVSLKLGLPTPV*HLLTYK
Trigger: TTTGTATGTTAAGAGATGGCACACTGGTGTCGGGAG...TCCAAGTTTCAGTGACACCGTCCTGCCTAACCAGATGCGGTCAGCCTCTTCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp CATATATTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGCGCCCGATCTCCCCTGATGAATaGTTCCACGCCATCTGCAAA +
Preference number: 4 (lower is better)
Translates to: HILYNKSEHGTADPLWRPISPDE*FHAICK
Trigger: TTTGCAGATGGCGTGGAAGCATTCATCAGGGGAGAT...CGGGCGCCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262233.11
ENST00000649352.1
CDS-3UTR CCA 90 bp CTGCCACCTCCGTTTAACGCATCAGAACTCAATCTTATCTCATACTGTAATGGGACAGGCTGCTGTAGCTaGAGAAGCCGTCCTCCATGC +
Preference number: 4 (lower is better)
Translates to: LPPPFNASELNLISYCNGTGCCS*RSRPPC
Trigger: GCATGGAGGACGGCTTCTCCAGCTACAGCAGCCTGT...CCCATTACAGTATGAGATAAGATTGAGTTCTGATGCGTTAAACGGAGGTGGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262233.11
ENST00000334192.8
CDS-3UTR CCA 90 bp CAAGAAGGTGGCAAAATGTCTCACCGTGAATCAGGGCGTGTGAACAAGGGATGGGCTGATTTGAGCAGCTaGATGTCGTCTTCTTGCATC +
Preference number: 4 (lower is better)
Translates to: QEGGKMSHRESGRVNKGWADLSS*MSSSCI
Trigger: GATGCAAGAAGACGACATCCAGCTGCTCAAATCAGC...CCATCCCTTGTTCACACGCCCTGATTCACGGTGAGACATTTTGCCACCTTCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CCA 90 bp CTGCTTCATAGACATTTCCAACCAATACTTCCCAGCTTAACATGGTGGAAGGAGCACTGGAAGAGCTGCTaGTGGAGCCTGTGCGATTCC +
Preference number: 4 (lower is better)
Translates to: LLHRHFQPILPSLTWWKEHWKSC*WSLCDS
Trigger: GGAATCGCACAGGCTCCACCAGCAGCTCTTCCAGTG...CTCCTTCCACCATGTTAAGCTGGGAAGTATTGGTTGGAAATGTCTATGAAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557741.1
CDS-3UTR CCA 90 bp CCACAAGTAACTATGATGTTGGTGTCCGTGGGGTGGAAATCCGCAGCAAACACACCAGATGCGCACATGTaGGGGCAATTGTTTTCCATC +
Preference number: 4 (lower is better)
Translates to: PQVTMMLVSVGWKSAANTPDAHM*GQLFSI
Trigger: GATGGAAAACAATTGCCCCCACATGTGCGCATCTGG...TGTGTTTGCTGCGGATTTCCACCCCACGGACACCAACATCATAGTTACTTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000554553.5
CDS-3UTR CCA 90 bp AAGTCAGTTAGGAGTAGAGTCTGCTTAGCACAAGAGGGATACAAGCCCTCTCTCTCCGTCCGAGCCTTCTaGCCACACTCCAAAAACATG +
Preference number: 4 (lower is better)
Translates to: KSVRSRVCLAQEGYKPSLSVRAF*PHSKNM
Trigger: CATGTTTTTGGAGTGTGGCCAGAAGGCTCGGACGGA...GAGAGAGGGCTTGTATCCCTCTTGTGCTAAGCAGACTCTACTCCTAACTGACTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CCA 90 bp AGTTTCCACACTTACGACTTGCTTACAGGCAGAGGGAACCCAGTAGAGGATTTCTCCGTCCGAGCCTTCTaGCCACACTCCAAAAACATG +
Preference number: 4 (lower is better)
Translates to: SFHTYDLLTGRGNPVEDFSVRAF*PHSKNM
Trigger: CATGTTTTTGGAGTGTGGCCAGAAGGCTCGGACGGA...GAAATCCTCTACTGGGTTCCCTCTGCCTGTAAGCAAGTCGTAAGTGTGGAAACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557313.5
CDS-3UTR CCA 90 bp AAGTCAGTTAGGAGTAGAGTCTGCTTAGCACAAGAGGGATACAAGCCCTCTCTCAGGAGTTTCTTCTCATaGGCCCGACAGACGGCATTG +
Preference number: 4 (lower is better)
Translates to: KSVRSRVCLAQEGYKPSLRSFFS*ARQTAL
Trigger: CAATGCCGTCTGTCGGGCCCATGAGAAGAAACTCCT...GAGAGAGGGCTTGTATCCCTCTTGTGCTAAGCAGACTCTACTCCTAACTGACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CCA 90 bp CTGCCACCTCCGTTTAACGCATCAGAACTCAATCTTATCTCATACTGTAATGGGGAGGCTGACCGCATCTaGTTAGGCAGGACGGTGTCA +
Preference number: 4 (lower is better)
Translates to: LPPPFNASELNLISYCNGEADRI*LGRTVS
Trigger: TGACACCGTCCTGCCTAACCAGATGCGGTCAGCCTC...CCCATTACAGTATGAGATAAGATTGAGTTCTGATGCGTTAAACGGAGGTGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CCA 90 bp GTGACCAAGGGTAATGCGAGTCTGTGTCTTCCTTGCCCATGCTGCTCCCCACAGATCTTCAATAATACATaGTGTTTACTGGTGCCCTGC +
Preference number: 4 (lower is better)
Translates to: VTKGNASLCLPCPCCSPQIFNNT*CLLVPC
Trigger: GCAGGGCACCAGTAAACACCATGTATTATTGAAGAT...CTGTGGGGAGCAGCATGGGCAAGGAAGACACAGACTCGCATTACCCTTGGTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CCA 90 bp CTGTGTCATATATTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGGTGAAATCAGCTCCGTaGCCTGGGAGTTCTGCAGAG +
Preference number: 4 (lower is better)
Translates to: LCHILYNKSEHGTADPLWVKSAP*PGSSAE
Trigger: CTCTGCAGAACTCCCAGGCCACGGAGCTGATTTCAC...CCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATGACACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327921.13
CDS-3UTR CCA 90 bp CTGCCACCTCCGTTTAACGCATCAGAACTCAATCTTATCTCATACTGTAATGGGCCAGAGAGGCTATCCTaGTACCAGGCTGGAAGTCCC +
Preference number: 4 (lower is better)
Translates to: LPPPFNASELNLISYCNGPERLS*YQAGSP
Trigger: GGGACTTCCAGCCTGGTACCAGGATAGCCTCTCTGG...CCCATTACAGTATGAGATAAGATTGAGTTCTGATGCGTTAAACGGAGGTGGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649352.1
CDS-3UTR CCA 90 bp GAAGTTGCTGGAGACTTTATTTGGGACAAAAGCGACTGCTTCATAGACATTTCCCCGTGTTCTAGGGCTTaGGTGAGGGGCTTCACCTCC +
Preference number: 4 (lower is better)
Translates to: EVAGDFIWDKSDCFIDISPCSRA*VRGFTS
Trigger: GGAGGTGAAGCCCCTCACCCAAGCCCTAGAACACGG...GGAAATGTCTATGAAGCAGTCGCTTTTGTCCCAAATAAAGTCTCCAGCAACTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000557741.1
CDS-3UTR TCA 90 bp AACTTGGAAACGCCTGTGTACCCTGCTGAAATATTGAAGTCAGTTAGGAGTAGACAGCAGTTTCTTTCCTaGCCCCGGAGGGGGATGGTA +
Preference number: 4 (lower is better)
Translates to: NLETPVYPAEILKSVRSRQQFLS*PRRGMV
Trigger: TACCATCCCCCTCCGGGGTCAGGAAAGAAACTGCTG...TCTACTCCTAACTGACTTCAATATTTCAGCAGGGTACACAGGCGTTTCCAAGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR TCA 90 bp TTAAACAAAACAGAAATCACAGTGACCAAGGGTAATGCGAGTCTGTGTCTTCCTCCACCACGGATGCGATaGAGTAGACGGTCTCTCCCG +
Preference number: 4 (lower is better)
Translates to: LNKTEITVTKGNASLCLPPPRMR*SRRSLP
Trigger: CGGGAGAGACCGTCTACTTCATCGCATCCGTGGTGG...AGGAAGACACAGACTCGCATTACCCTTGGTCACTGTGATTTCTGTTTTGTTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR TCA 90 bp CTGTGTCATATATTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGGTGATCCGATCAGGATaGACTGCTAGGCACTTCACG +
Preference number: 4 (lower is better)
Translates to: LCHILYNKSEHGTADPLWVIRSG*TARHFT
Trigger: CGTGAAGTGCCTAGCAGTTCATCCTGATCGGATCAC...CCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATGACACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR TCA 90 bp AAGTCAGTTAGGAGTAGAGTCTGCTTAGCACAAGAGGGATACAAGCCCTCTCTCGTCCTGTTGCTATCGTaGTCCGATCAGGATGAACTG +
Preference number: 4 (lower is better)
Translates to: KSVRSRVCLAQEGYKPSLVLLLS*SDQDEL
Trigger: CAGTTCATCCTGATCGGATCACGATAGCAACAGGAC...GAGAGAGGGCTTGTATCCCTCTTGTGCTAAGCAGACTCTACTCCTAACTGACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR TCA 90 bp GTGACCAAGGGTAATGCGAGTCTGTGTCTTCCTTGCCCATGCTGCTCCCCACAGAAAAACCTATTCCAATaGCGTGGAGAGTATTCAATG +
Preference number: 4 (lower is better)
Translates to: VTKGNASLCLPCPCCSPQKNLFQ*RGEYSM
Trigger: CATTGAATACTCTCCACGTCATTGGAATAGGTTTTT...CTGTGGGGAGCAGCATGGGCAAGGAAGACACAGACTCGCATTACCCTTGGTCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR TCA 90 bp TTGAGTATGGTAATTAGGCCAAATCCTTTATGGTTATCTCCCCTGATGAATGCTGGGTGTGAAGTCCCCTaGCAGAGTGCCCTGCAGGAC +
Preference number: 4 (lower is better)
Translates to: LSMVIRPNPLWLSPLMNAGCEVP*QSALQD
Trigger: GTCCTGCAGGGCACTCTGTCAGGGGACTTCACACCC...AGCATTCATCAGGGGAGATAACCATAAAGGATTTGGCCTAATTACCATACTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262233.11
ENST00000649352.1
CDS-3UTR TCA 90 bp AATTTCTGCCACCTCCGTTTAACGCATCAGAACTCAATCTTATCTCATACTGTACCCGACAGACGGCATTaGTGTCGGTTCCGTCCGAGC +
Preference number: 4 (lower is better)
Translates to: NFCHLRLTHQNSILSHTVPDRRH*CRFRPS
Trigger: GCTCGGACGGAACCGACATCAATGCCGTCTGTCGGG...TACAGTATGAGATAAGATTGAGTTCTGATGCGTTAAACGGAGGTGGCAGAAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR TCA 90 bp AGCCTCCCCAAGGGAGAATGCAATGAAACTTTGGAAAATGTAACCAAACACAGTCTGCGAGCAGGGGTATaGGAAGAGGTGCACTTTGCC +
Preference number: 4 (lower is better)
Translates to: SLPKGECNETLENVTKHSLRAGV*EEVHFA
Trigger: GGCAAAGTGCACCTCTTCTCATACCCCTGCTCGCAG...ACTGTGTTTGGTTACATTTTCCAAAGTTTCATTGCATTCTCCCTTGGGGAGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR TCA 90 bp ATGGTAATTAGGCCAAATCCTTTATGGTTATCTCCCCTGATGAATGCTTCCACGGGAAATCGACATTGGTaGCATGGCTGCTGTGCCCGC +
Preference number: 4 (lower is better)
Translates to: MVIRPNPLWLSPLMNASTGNRHW*HGCCAR
Trigger: GCGGGCACAGCAGCCATGTCACCAATGTCGATTTCC...CGTGGAAGCATTCATCAGGGGAGATAACCATAAAGGATTTGGCCTAATTACCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262233.11
ENST00000649352.1
CDS-3UTR TCA 90 bp TTAAACAAAACAGAAATCACAGTGACCAAGGGTAATGCGAGTCTGTGTCTTCCTTCCCGCCCGTGGAGATaGGGTGGCTGTCTTCACAGA +
Preference number: 4 (lower is better)
Translates to: LNKTEITVTKGNASLCLPSRPWR*GGCLHR
Trigger: TCTGTGAAGACAGCCACCTCATCTCCACGGGCGGGA...AGGAAGACACAGACTCGCATTACCCTTGGTCACTGTGATTTCTGTTTTGTTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp CTGTGTCATATATTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGTGCATCTGGACTCTCTaGTCCAGTGAAGCAATGCGG +
Preference number: 4 (lower is better)
Translates to: LCHILYNKSEHGTADPLWCIWTL*SSEAMR
Trigger: CCGCATTGCTTCACTGGAGCAGAGAGTCCAGATGCA...CCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATGACACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp CTGCCACCTCCGTTTAACGCATCAGAACTCAATCTTATCTCATACTGTAATGGGCTCTGGAATCCCCATTaGTTTCCCTTCGACCCCCAG +
Preference number: 4 (lower is better)
Translates to: LPPPFNASELNLISYCNGLWNPH*FPFDPQ
Trigger: CTGGGGGTCGAAGGGAAAGCAATGGGGATTCCAGAG...CCCATTACAGTATGAGATAAGATTGAGTTCTGATGCGTTAAACGGAGGTGGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp CTGCTTCATAGACATTTCCAACCAATACTTCCCAGCTTAACATGGTGGAAGGAGCTCTGGAATCCCCATTaGTTTCCCTTCGACCCCCAG +
Preference number: 4 (lower is better)
Translates to: LLHRHFQPILPSLTWWKELWNPH*FPFDPQ
Trigger: CTGGGGGTCGAAGGGAAAGCAATGGGGATTCCAGAG...CTCCTTCCACCATGTTAAGCTGGGAAGTATTGGTTGGAAATGTCTATGAAGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557741.1
CDS-3UTR GCA 90 bp TCAGAACTCAATCTTATCTCATACTGTAATGGGTCGCCCATGCACAAAAGACAGTGCCACTGGAAGAGCTaGTGGTGGAGCCTGTGCGAT +
Preference number: 4 (lower is better)
Translates to: SELNLISYCNGSPMHKRQCHWKS*WWSLCD
Trigger: ATCGCACAGGCTCCACCAGCAGCTCTTCCAGTGGCA...CTGTCTTTTGTGCATGGGCGACCCATTACAGTATGAGATAAGATTGAGTTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp CTGCCACCTCCGTTTAACGCATCAGAACTCAATCTTATCTCATACTGTAATGGGTCCCAGAGAGTGGCATaGTTGTCATGCCCACAGGTC +
Preference number: 4 (lower is better)
Translates to: LPPPFNASELNLISYCNGSQRVA*LSCPQV
Trigger: GACCTGTGGGCATGACAAGCATGCCACTCTCTGGGA...CCCATTACAGTATGAGATAAGATTGAGTTCTGATGCGTTAAACGGAGGTGGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp CTGCCACCTCCGTTTAACGCATCAGAACTCAATCTTATCTCATACTGTAATGGGAATGACCCGAGCACTTaGCCACTCGCGTGTACTTCC +
Preference number: 4 (lower is better)
Translates to: LPPPFNASELNLISYCNGNDPST*PLACTS
Trigger: GGAAGTACACGCGAGTGGGCAAGTGCTCGGGTCATT...CCCATTACAGTATGAGATAAGATTGAGTTCTGATGCGTTAAACGGAGGTGGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp AAGTCAGTTAGGAGTAGAGTCTGCTTAGCACAAGAGGGATACAAGCCCTCTCTCGGGTATGAGAAGAGGTaGACTTTGCCAAAGTCGTCG +
Preference number: 4 (lower is better)
Translates to: KSVRSRVCLAQEGYKPSLGYEKR*TLPKSS
Trigger: CGACGACTTTGGCAAAGTGCACCTCTTCTCATACCC...GAGAGAGGGCTTGTATCCCTCTTGTGCTAAGCAGACTCTACTCCTAACTGACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp TTAAACAAAACAGAAATCACAGTGACCAAGGGTAATGCGAGTCTGTGTCTTCCTCTTCCTTGCCCATGCTaGTCCCCACAGCTCTCGGTG +
Preference number: 4 (lower is better)
Translates to: LNKTEITVTKGNASLCLPLPCPC*SPQLSV
Trigger: CACCGAGAGCTGTGGGGAGCAGCATGGGCAAGGAAG...AGGAAGACACAGACTCGCATTACCCTTGGTCACTGTGATTTCTGTTTTGTTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp AGTCTCATCTGCAAACTACAGTCTCATCTGCAAATGGCCCAGGTGAGAATAAAATGTCTTCCTTGCCCATaGTGCTCCCCACAGCTCTCG +
Preference number: 4 (lower is better)
Translates to: SLICKLQSHLQMAQVRIKCLPCP*CSPQLS
Trigger: CGAGAGCTGTGGGGAGCAGCATGGGCAAGGAAGACA...TTTTATTCTCACCTGGGCCATTTGCAGATGAGACTGTAGTTTGCAGATGAGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262233.11
ENST00000649352.1
CDS-3UTR GCA 90 bp CTGCCACCTCCGTTTAACGCATCAGAACTCAATCTTATCTCATACTGTAATGGGGACAGGAAAAGCAGCTaGCCTTGGTACCTGGTGGAG +
Preference number: 4 (lower is better)
Translates to: LPPPFNASELNLISYCNGDRKSS*PWYLVE
Trigger: CTCCACCAGGTACCAAGGGCAGCTGCTTTTCCTGTC...CCCATTACAGTATGAGATAAGATTGAGTTCTGATGCGTTAAACGGAGGTGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp CTGTGTCATATATTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGGGATCCGGAAGCAAGTaGCTGCCTCTTTGTAGTCAG +
Preference number: 4 (lower is better)
Translates to: LCHILYNKSEHGTADPLWGSGSK*LPLCSQ
Trigger: CTGACTACAAAGAGGCAGGCACTTGCTTCCGGATCC...CCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATGACACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327921.13
CDS-3UTR GCA 90 bp CCACAAGTAACTATGATGTTGGTGTCCGTGGGGTGGAAATCCGCAGCAAACACAAAACAGGGACTCGGATaGCTCACATCTCTTCACATC +
Preference number: 4 (lower is better)
Translates to: PQVTMMLVSVGWKSAANTKQGLG*LTSLHI
Trigger: GATGTGAAGAGATGTGAGGCATCCGAGTCCCTGTTT...TGTGTTTGCTGCGGATTTCCACCCCACGGACACCAACATCATAGTTACTTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554553.5
CDS-3UTR CCA 90 bp AGCCTCCCCAAGGGAGAATGCAATGAAACTTTGGAAAATGTAACCAAACACAGTACAGGCTGCTGTAGCTaGAGAAGCCGTCCTCCATGC +
Preference number: 4 (lower is better)
Translates to: SLPKGECNETLENVTKHSTGCCS*RSRPPC
Trigger: GCATGGAGGACGGCTTCTCCAGCTACAGCAGCCTGT...ACTGTGTTTGGTTACATTTTCCAAAGTTTCATTGCATTCTCCCTTGGGGAGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262233.11
ENST00000334192.8
CDS-3UTR CCA 90 bp AGTCTCATCTGCAAACTACAGTCTCATCTGCAAATGGCCCAGGTGAGAATAAAATGGAAGAGCTGCTGGTaGAGCCTGTGCGATTCCGGT +
Preference number: 4 (lower is better)
Translates to: SLICKLQSHLQMAQVRIKWKSCW*SLCDSG
Trigger: ACCGGAATCGCACAGGCTCCACCAGCAGCTCTTCCA...TTTTATTCTCACCTGGGCCATTTGCAGATGAGACTGTAGTTTGCAGATGAGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262233.11
ENST00000649352.1
CDS-3UTR CCA 90 bp TTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGCGCCCGCTGACACTTGAGTCTCTTGGTTaGAAGTTCTACTTTTGCTTC +
Preference number: 4 (lower is better)
Translates to: LYNKSEHGTADPLWRPLTLESLG*KFYFCF
Trigger: GAAGCAAAAGTAGAACTTCCAACCAAGAGACTCAAG...TGTCAGCGGGCGCCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CCA 90 bp TATGATGTTGGTGTCCGTGGGGTGGAAATCCGCAGCAAACACAGCTTCATTAGAAGAGCACATGGTCGTTaGAGTCATCCACAGCACAGA +
Preference number: 4 (lower is better)
Translates to: YDVGVRGVEIRSKHSFIRRAHGR*SHPQHR
Trigger: TCTGTGCTGTGGATGACTCCAACGACCATGTGCTCT...TCTAATGAAGCTGTGTTTGCTGCGGATTTCCACCCCACGGACACCAACATCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554553.5
CDS-3UTR CCA 90 bp AAGTCAGTTAGGAGTAGAGTCTGCTTAGCACAAGAGGGATACAAGCCCTCTCTCATTTTGAGGCATGGATaGCCAGTCCCCAGAGCTCAT +
Preference number: 4 (lower is better)
Translates to: KSVRSRVCLAQEGYKPSLILRHG*PVPRAH
Trigger: ATGAGCTCTGGGGACTGGCCATCCATGCCTCAAAAT...GAGAGAGGGCTTGTATCCCTCTTGTGCTAAGCAGACTCTACTCCTAACTGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CCA 90 bp TCAGAACTCAATCTTATCTCATACTGTAATGGGTCGCCCATGCACAAAAGACAGCAGCGTCCCAGAGAGTaGCATGCTTGTCATGCCCAC +
Preference number: 4 (lower is better)
Translates to: SELNLISYCNGSPMHKRQQRPRE*HACHAH
Trigger: GTGGGCATGACAAGCATGCCACTCTCTGGGACGCTG...CTGTCTTTTGTGCATGGGCGACCCATTACAGTATGAGATAAGATTGAGTTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CCA 90 bp TGTGAAGAGGCTGACCGCATCTGGTTAGGCAGGACGGTGTCACTGAAACTTGGACACACTCCAAAAACATaGAATCCCAAAGTGCAGGTA +
Preference number: 4 (lower is better)
Translates to: CEEADRIWLGRTVSLKLGHTPKT*NPKVQV
Trigger: TACCTGCACTTTGGGATTCCATGTTTTTGGAGTGTG...TCCAAGTTTCAGTGACACCGTCCTGCCTAACCAGATGCGGTCAGCCTCTTCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CCA 90 bp CTGTGTCATATATTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGTCCGTCCGAGCCTTCTaGCCACACTCCAAAAACATG +
Preference number: 4 (lower is better)
Translates to: LCHILYNKSEHGTADPLWSVRAF*PHSKNM
Trigger: CATGTTTTTGGAGTGTGGCCAGAAGGCTCGGACGGA...CCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATGACACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CCA 90 bp TCAGAACTCAATCTTATCTCATACTGTAATGGGTCGCCCATGCACAAAAGACAGCCCCACAGCTCTCGGTaGGTACTAAATGACGCGCCA +
Preference number: 4 (lower is better)
Translates to: SELNLISYCNGSPMHKRQPHSSR*VLNDAP
Trigger: TGGCGCGTCATTTAGTACCCACCGAGAGCTGTGGGG...CTGTCTTTTGTGCATGGGCGACCCATTACAGTATGAGATAAGATTGAGTTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CCA 90 bp AGCCTCCCCAAGGGAGAATGCAATGAAACTTTGGAAAATGTAACCAAACACAGTGAGGCTGACCGCATCTaGTTAGGCAGGACGGTGTCA +
Preference number: 4 (lower is better)
Translates to: SLPKGECNETLENVTKHSEADRI*LGRTVS
Trigger: TGACACCGTCCTGCCTAACCAGATGCGGTCAGCCTC...ACTGTGTTTGGTTACATTTTCCAAAGTTTCATTGCATTCTCCCTTGGGGAGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CCA 90 bp AACTTGGAAACGCCTGTGTACCCTGCTGAAATATTGAAGTCAGTTAGGAGTAGAGAGGCTGACCGCATCTaGTTAGGCAGGACGGTGTCA +
Preference number: 4 (lower is better)
Translates to: NLETPVYPAEILKSVRSREADRI*LGRTVS
Trigger: TGACACCGTCCTGCCTAACCAGATGCGGTCAGCCTC...TCTACTCCTAACTGACTTCAATATTTCAGCAGGGTACACAGGCGTTTCCAAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CCA 90 bp AGCCTCCCCAAGGGAGAATGCAATGAAACTTTGGAAAATGTAACCAAACACAGTCGTGTGAACAAGGGATaGGGGATGCAAGCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: SLPKGECNETLENVTKHSRVNKG*GMQARW
Trigger: CCACCTGGCTTGCATCCCCCATCCCTTGTTCACACG...ACTGTGTTTGGTTACATTTTCCAAAGTTTCATTGCATTCTCCCTTGGGGAGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
3UTR CAA 72 bp AGGGAACCCAGTAGAGGATTTCGTAGTCTCCGGAATTaGACACGAGGAACTGTGAGTTTACAGACCAGTCCA +
Preference number: 4 (lower is better)
Translates to: REPSRGFRSLRN*TRGTVSLQTSP
Trigger: TGGACTGGTCTGTAAACTCACAGTTCCTCGTGTCAAATTCCGGAGACTACGAAATCCTCTACTGGGTTCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557313.5
CDS-3UTR TCA 90 bp CAATGTGCACTGTGTCATATATTGTACAACAAAAGTGAACACGGAACCGCTGATCAGCAGTTTCTTTCCTaGCCCCGGAGGGGGATGGTA +
Preference number: 4 (lower is better)
Translates to: QCALCHILYNKSEHGTADQQFLS*PRRGMV
Trigger: TACCATCCCCCTCCGGGGTCAGGAAAGAAACTGCTG...ATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATGACACAGTGCACATTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR TCA 90 bp GACAAATTTCTGCCACCTCCGTTTAACGCATCAGAACTCAATCTTATCTCATACCAGCAGTTTCTTTCCTaGCCCCGGAGGGGGATGGTA +
Preference number: 4 (lower is better)
Translates to: DKFLPPPFNASELNLISYQQFLS*PRRGMV
Trigger: TACCATCCCCCTCCGGGGTCAGGAAAGAAACTGCTG...GTATGAGATAAGATTGAGTTCTGATGCGTTAAACGGAGGTGGCAGAAATTTGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR TCA 90 bp GGCTATAATGTAAACGTTGCAACCTTGTTGGTATTCAATGTGCACTGTGTCATACCACCACGGATGCGATaGAGTAGACGGTCTCTCCCG +
Preference number: 4 (lower is better)
Translates to: GYNVNVATLLVFNVHCVIPPRMR*SRRSLP
Trigger: CGGGAGAGACCGTCTACTTCATCGCATCCGTGGTGG...TATGACACAGTGCACATTGAATACCAACAAGGTTGCAACGTTTACATTATAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR TCA 90 bp AGGGAACCCAGTAGAGGATTTCGTAGTCTCCGGAATTTGACACGAGGAACTGTGGAAATTCCCATCTGGTaGGTATCGCATTACAGAGAG +
Preference number: 4 (lower is better)
Translates to: REPSRGFRSLRNLTRGTVEIPIW*VSHYRE
Trigger: CTCTCTGTAATGCGATACTCACCAGATGGGAATTTC...CACAGTTCCTCGTGTCAAATTCCGGAGACTACGAAATCCTCTACTGGGTTCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557313.5
CDS-3UTR TCA 90 bp TTAAACAAAACAGAAATCACAGTGACCAAGGGTAATGCGAGTCTGTGTCTTCCTCTGCGAGCAGGGGTATaGGAAGAGGTGCACTTTGCC +
Preference number: 4 (lower is better)
Translates to: LNKTEITVTKGNASLCLPLRAGV*EEVHFA
Trigger: GGCAAAGTGCACCTCTTCTCATACCCCTGCTCGCAG...AGGAAGACACAGACTCGCATTACCCTTGGTCACTGTGATTTCTGTTTTGTTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR TCA 90 bp CAATGTGCACTGTGTCATATATTGTACAACAAAAGTGAACACGGAACCGCTGATGGAAATCGACATTGGTaGCATGGCTGCTGTGCCCGC +
Preference number: 4 (lower is better)
Translates to: QCALCHILYNKSEHGTADGNRHW*HGCCAR
Trigger: GCGGGCACAGCAGCCATGTCACCAATGTCGATTTCC...ATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATGACACAGTGCACATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR TCA 90 bp GGCTATAATGTAAACGTTGCAACCTTGTTGGTATTCAATGTGCACTGTGTCATATCCCGCCCGTGGAGATaGGGTGGCTGTCTTCACAGA +
Preference number: 4 (lower is better)
Translates to: GYNVNVATLLVFNVHCVISRPWR*GGCLHR
Trigger: TCTGTGAAGACAGCCACCTCATCTCCACGGGCGGGA...TATGACACAGTGCACATTGAATACCAACAAGGTTGCAACGTTTACATTATAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR TCA 90 bp TGTGAAGAGGCTGACCGCATCTGGTTAGGCAGGACGGTGTCACTGAAACTTGGATCTGCAGTAGGCTGGTaGTGTCATCAAAAATGTTTT +
Preference number: 4 (lower is better)
Translates to: CEEADRIWLGRTVSLKLGSAVGW*CHQKCF
Trigger: AAAACATTTTTGATGACATCACCAGCCTACTGCAGA...TCCAAGTTTCAGTGACACCGTCCTGCCTAACCAGATGCGGTCAGCCTCTTCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp AGCCTCCCCAAGGGAGAATGCAATGAAACTTTGGAAAATGTAACCAAACACAGTAAGCGCTGTCATCGTTaGAGAACTGGAGCAGCGAGG +
Preference number: 4 (lower is better)
Translates to: SLPKGECNETLENVTKHSKRCHR*RTGAAR
Trigger: CCTCGCTGCTCCAGTTCTGCAACGATGACAGCGCTT...ACTGTGTTTGGTTACATTTTCCAAAGTTTCATTGCATTCTCCCTTGGGGAGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262233.11
ENST00000334192.8
CDS-3UTR GCA 90 bp TCAGAACTCAATCTTATCTCATACTGTAATGGGTCGCCCATGCACAAAAGACAGAAGCGCTGTCATCGTTaGAGAACTGGAGCAGCGAGG +
Preference number: 4 (lower is better)
Translates to: SELNLISYCNGSPMHKRQKRCHR*RTGAAR
Trigger: CCTCGCTGCTCCAGTTCTGCAACGATGACAGCGCTT...CTGTCTTTTGTGCATGGGCGACCCATTACAGTATGAGATAAGATTGAGTTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262233.11
ENST00000334192.8
CDS-3UTR GCA 90 bp AACTTGGAAACGCCTGTGTACCCTGCTGAAATATTGAAGTCAGTTAGGAGTAGAGGTCTGTCACCTCCATaGTACTTGCAGCAGAAGCGC +
Preference number: 4 (lower is better)
Translates to: NLETPVYPAEILKSVRSRGLSPP*YLQQKR
Trigger: GCGCTTCTGCTGCAAGTAGCATGGAGGTGACAGACC...TCTACTCCTAACTGACTTCAATATTTCAGCAGGGTACACAGGCGTTTCCAAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp CTGCCACCTCCGTTTAACGCATCAGAACTCAATCTTATCTCATACTGTAATGGGTGCATCTGGACTCTCTaGTCCAGTGAAGCAATGCGG +
Preference number: 4 (lower is better)
Translates to: LPPPFNASELNLISYCNGCIWTL*SSEAMR
Trigger: CCGCATTGCTTCACTGGAGCAGAGAGTCCAGATGCA...CCCATTACAGTATGAGATAAGATTGAGTTCTGATGCGTTAAACGGAGGTGGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp CTGTGTCATATATTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGTGGATGTCGTCTTCTTaGATCTGGACTCTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: LCHILYNKSEHGTADPLWWMSSS*IWTLCS
Trigger: GGAGCAGAGAGTCCAGATGCAAGAAGACGACATCCA...CCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATGACACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp TCTTTCCTGACCCCGGAGGGGGATGGTAGAGAGCCAGTAGGTTTCTTTGGTAACGATGTTACTTTTGGTTaGTGGCACAGCAGTTTCTTT +
Preference number: 4 (lower is better)
Translates to: SFLTPEGDGREPVGFFGNDVTFG*WHSSFF
Trigger: AAAGAAACTGCTGTGCCAGCAACCAAAAGTAACATC...GTTACCAAAGAAACCTACTGGCTCTCTACCATCCCCCTCCGGGGTCAGGAAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000555096.5
CDS-3UTR GCA 90 bp CAATGTGCACTGTGTCATATATTGTACAACAAAAGTGAACACGGAACCGCTGATTGCTGGTGGAGCCTGTaGGATTCCGGTTTCCTCTGG +
Preference number: 4 (lower is better)
Translates to: QCALCHILYNKSEHGTADCWWSL*DSGFLW
Trigger: CCAGAGGAAACCGGAATCGCACAGGCTCCACCAGCA...ATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATGACACAGTGCACATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp AGAAGTTGCTGGAGACTTTATTTGGGACAAAAGCGACTGCTTCATAGACATTTCTGCTGGTGGAGCCTGTaGGATTCCGGTTTCCTCTGG +
Preference number: 4 (lower is better)
Translates to: RSCWRLYLGQKRLLHRHFCWWSL*DSGFLW
Trigger: CCAGAGGAAACCGGAATCGCACAGGCTCCACCAGCA...GAAATGTCTATGAAGCAGTCGCTTTTGTCCCAAATAAAGTCTCCAGCAACTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557741.1
CDS-3UTR GCA 90 bp GACAAATTTCTGCCACCTCCGTTTAACGCATCAGAACTCAATCTTATCTCATACTGCCACTGGAAGAGCTaGTGGTGGAGCCTGTGCGAT +
Preference number: 4 (lower is better)
Translates to: DKFLPPPFNASELNLISYCHWKS*WWSLCD
Trigger: ATCGCACAGGCTCCACCAGCAGCTCTTCCAGTGGCA...GTATGAGATAAGATTGAGTTCTGATGCGTTAAACGGAGGTGGCAGAAATTTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp CTGTGTCATATATTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGTTCCATCCTTCGATGTaGCCGCAACTTGTCCTGTTG +
Preference number: 4 (lower is better)
Translates to: LCHILYNKSEHGTADPLWFHPSM*PQLVLL
Trigger: CAACAGGACAAGTTGCGGGCACATCGAAGGATGGAA...CCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATGACACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp CTGTGTCATATATTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGTACAAAGTGCAAAAATaGCACCCTCATGGGCCCCCT +
Preference number: 4 (lower is better)
Translates to: LCHILYNKSEHGTADPLWYKVQK*HPHGPP
Trigger: AGGGGGCCCATGAGGGTGGCATTTTTGCACTTTGTA...CCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATGACACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp AGCCTCCCCAAGGGAGAATGCAATGAAACTTTGGAAAATGTAACCAAACACAGTTCCCAGAGAGTGGCATaGTTGTCATGCCCACAGGTC +
Preference number: 4 (lower is better)
Translates to: SLPKGECNETLENVTKHSSQRVA*LSCPQV
Trigger: GACCTGTGGGCATGACAAGCATGCCACTCTCTGGGA...ACTGTGTTTGGTTACATTTTCCAAAGTTTCATTGCATTCTCCCTTGGGGAGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp CTGTGTCATATATTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGTCCACACTTACGACTTaGTTACAGGCAGAGGGAACC +
Preference number: 4 (lower is better)
Translates to: LCHILYNKSEHGTADPLWSTLTT*LQAEGT
Trigger: GGTTCCCTCTGCCTGTAAGCAAGTCGTAAGTGTGGA...CCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATGACACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp CTGTGTCATATATTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGAGAAGAGGTGCACTTTaGCAAAGTCGTCGCCTGTTG +
Preference number: 4 (lower is better)
Translates to: LCHILYNKSEHGTADPLWRRGAL*QSRRLL
Trigger: CAACAGGCGACGACTTTGGCAAAGTGCACCTCTTCT...CCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATGACACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp AGCCTCCCCAAGGGAGAATGCAATGAAACTTTGGAAAATGTAACCAAACACAGTCTTGGAGCCCTGAACTaGGAGCAGGGGTATGAGAAG +
Preference number: 4 (lower is better)
Translates to: SLPKGECNETLENVTKHSLGALN*EQGYEK
Trigger: CTTCTCATACCCCTGCTCGCAGTTCAGGGCTCCAAG...ACTGTGTTTGGTTACATTTTCCAAAGTTTCATTGCATTCTCCCTTGGGGAGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp AATATCATCTCATGCCAAGTAATATACACAAGAAGGTGGCAAAATGTCTCACCGCTTCCTTGCCCATGCTaGTCCCCACAGCTCTCGGTG +
Preference number: 4 (lower is better)
Translates to: NIISCQVIYTRRWQNVSPLPCPC*SPQLSV
Trigger: CACCGAGAGCTGTGGGGAGCAGCATGGGCAAGGAAG...CGGTGAGACATTTTGCCACCTTCTTGTGTATATTACTTGGCATGAGATGATATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp TTAAACAAAACAGAAATCACAGTGACCAAGGGTAATGCGAGTCTGTGTCTTCCTTGTCTTCCTTGCCCATaGTGCTCCCCACAGCTCTCG +
Preference number: 4 (lower is better)
Translates to: LNKTEITVTKGNASLCLPCLPCP*CSPQLS
Trigger: CGAGAGCTGTGGGGAGCAGCATGGGCAAGGAAGACA...AGGAAGACACAGACTCGCATTACCCTTGGTCACTGTGATTTCTGTTTTGTTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp GACAAATTTCTGCCACCTCCGTTTAACGCATCAGAACTCAATCTTATCTCATACTGTCTTCCTTGCCCATaGTGCTCCCCACAGCTCTCG +
Preference number: 4 (lower is better)
Translates to: DKFLPPPFNASELNLISYCLPCP*CSPQLS
Trigger: CGAGAGCTGTGGGGAGCAGCATGGGCAAGGAAGACA...GTATGAGATAAGATTGAGTTCTGATGCGTTAAACGGAGGTGGCAGAAATTTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp ATGGTAATTAGGCCAAATCCTTTATGGTTATCTCCCCTGATGAATGCTTCCACGGACAGGAAAAGCAGCTaGCCTTGGTACCTGGTGGAG +
Preference number: 4 (lower is better)
Translates to: MVIRPNPLWLSPLMNASTDRKSS*PWYLVE
Trigger: CTCCACCAGGTACCAAGGGCAGCTGCTTTTCCTGTC...CGTGGAAGCATTCATCAGGGGAGATAACCATAAAGGATTTGGCCTAATTACCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262233.11
ENST00000649352.1
CDS-3UTR CCA 90 bp CATATATTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGCGCCCGGTTACTTTTGGTTGCTaGCACAGCAGTTTCTTTCCT +
Preference number: 4 (lower is better)
Translates to: HILYNKSEHGTADPLWRPVTFGC*HSSFFP
Trigger: AGGAAAGAAACTGCTGTGCCAGCAACCAAAAGTAAC...CGGGCGCCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262233.11
CDS-3UTR CCA 90 bp TTAAACAAAACAGAAATCACAGTGACCAAGGGTAATGCGAGTCTGTGTCTTCCTCACTGGAAGAGCTGCTaGTGGAGCCTGTGCGATTCC +
Preference number: 4 (lower is better)
Translates to: LNKTEITVTKGNASLCLPHWKSC*WSLCDS
Trigger: GGAATCGCACAGGCTCCACCAGCAGCTCTTCCAGTG...AGGAAGACACAGACTCGCATTACCCTTGGTCACTGTGATTTCTGTTTTGTTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CCA 90 bp CTGTGTCATATATTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGAGAGCACATGGTCGTTaGAGTCATCCACAGCACAGA +
Preference number: 4 (lower is better)
Translates to: LCHILYNKSEHGTADPLWRAHGR*SHPQHR
Trigger: TCTGTGCTGTGGATGACTCCAACGACCATGTGCTCT...CCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATGACACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CCA 90 bp TTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGCGCCCGCTGACAACAGAGGACAAACTTTaGCTTTTCTTGTTTCTCGAA +
Preference number: 4 (lower is better)
Translates to: LYNKSEHGTADPLWRPLTTEDKL*LFLFLE
Trigger: TTCGAGAAACAAGAAAAGCCAAAGTTTGTCCTCTGT...TGTCAGCGGGCGCCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CCA 90 bp CTGTGTCATATATTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGATTTTGAGGCATGGATaGCCAGTCCCCAGAGCTCAT +
Preference number: 4 (lower is better)
Translates to: LCHILYNKSEHGTADPLWILRHG*PVPRAH
Trigger: ATGAGCTCTGGGGACTGGCCATCCATGCCTCAAAAT...CCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATGACACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CCA 90 bp TTAAACAAAACAGAAATCACAGTGACCAAGGGTAATGCGAGTCTGTGTCTTCCTCAGCGTCCCAGAGAGTaGCATGCTTGTCATGCCCAC +
Preference number: 4 (lower is better)
Translates to: LNKTEITVTKGNASLCLPQRPRE*HACHAH
Trigger: GTGGGCATGACAAGCATGCCACTCTCTGGGACGCTG...AGGAAGACACAGACTCGCATTACCCTTGGTCACTGTGATTTCTGTTTTGTTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CCA 90 bp GACAAATTTCTGCCACCTCCGTTTAACGCATCAGAACTCAATCTTATCTCATACCAGCGTCCCAGAGAGTaGCATGCTTGTCATGCCCAC +
Preference number: 4 (lower is better)
Translates to: DKFLPPPFNASELNLISYQRPRE*HACHAH
Trigger: GTGGGCATGACAAGCATGCCACTCTCTGGGACGCTG...GTATGAGATAAGATTGAGTTCTGATGCGTTAAACGGAGGTGGCAGAAATTTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CCA 90 bp CTGCCACCTCCGTTTAACGCATCAGAACTCAATCTTATCTCATACTGTAATGGGTCCGTCCGAGCCTTCTaGCCACACTCCAAAAACATG +
Preference number: 4 (lower is better)
Translates to: LPPPFNASELNLISYCNGSVRAF*PHSKNM
Trigger: CATGTTTTTGGAGTGTGGCCAGAAGGCTCGGACGGA...CCCATTACAGTATGAGATAAGATTGAGTTCTGATGCGTTAAACGGAGGTGGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CCA 90 bp TTAAACAAAACAGAAATCACAGTGACCAAGGGTAATGCGAGTCTGTGTCTTCCTGCCGTAGATGTGGCTTaGAGCCCTGAACTGCGAGCA +
Preference number: 4 (lower is better)
Translates to: LNKTEITVTKGNASLCLPAVDVA*SPELRA
Trigger: TGCTCGCAGTTCAGGGCTCCAAGCCACATCTACGGC...AGGAAGACACAGACTCGCATTACCCTTGGTCACTGTGATTTCTGTTTTGTTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CCA 90 bp CATATATTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGCGCCCGACGTTGCAACCTTGTTaGTATTCAATGTGCACTGTG +
Preference number: 4 (lower is better)
Translates to: HILYNKSEHGTADPLWRPTLQPC*YSMCTV
Trigger: CACAGTGCACATTGAATACCAACAAGGTTGCAACGT...CGGGCGCCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CCA 90 bp TTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGCGCCCGCTGACAATCTGTTTAATCTTTTaGTTGCTGGCACAGCAGTTT +
Preference number: 4 (lower is better)
Translates to: LYNKSEHGTADPLWRPLTICLIF*LLAQQF
Trigger: AAACTGCTGTGCCAGCAACCAAAAGATTAAACAGAT...TGTCAGCGGGCGCCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CCA 90 bp CATATATTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGCGCCCGGAGGGCCAGAGTAGATaGTCATTACTTTTGAATGTC +
Preference number: 4 (lower is better)
Translates to: HILYNKSEHGTADPLWRPEGQSR*SLLLNV
Trigger: GACATTCAAAAGTAATGACCATCTACTCTGGCCCTC...CGGGCGCCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327921.13
CDS-3UTR CCA 90 bp GACAAATTTCTGCCACCTCCGTTTAACGCATCAGAACTCAATCTTATCTCATACATCCTGGTACCAGGCTaGAAGTCCCCCGTGTTGAGG +
Preference number: 4 (lower is better)
Translates to: DKFLPPPFNASELNLISYILVPG*KSPVLR
Trigger: CCTCAACACGGGGGACTTCCAGCCTGGTACCAGGAT...GTATGAGATAAGATTGAGTTCTGATGCGTTAAACGGAGGTGGCAGAAATTTGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649352.1
CDS-3UTR TCA 90 bp CAATGTGCACTGTGTCATATATTGTACAACAAAAGTGAACACGGAACCGCTGATGACTCTCTGCTCCAGTaGAGCAATGCGGTCTGTCAC +
Preference number: 4 (lower is better)
Translates to: QCALCHILYNKSEHGTADDSLLQ*SNAVCH
Trigger: GTGACAGACCGCATTGCTTCACTGGAGCAGAGAGTC...ATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATGACACAGTGCACATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR TCA 90 bp TTAAACAAAACAGAAATCACAGTGACCAAGGGTAATGCGAGTCTGTGTCTTCCTGACTCTCTGCTCCAGTaGAGCAATGCGGTCTGTCAC +
Preference number: 4 (lower is better)
Translates to: LNKTEITVTKGNASLCLPDSLLQ*SNAVCH
Trigger: GTGACAGACCGCATTGCTTCACTGGAGCAGAGAGTC...AGGAAGACACAGACTCGCATTACCCTTGGTCACTGTGATTTCTGTTTTGTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR TCA 90 bp TTCTTTGGTAACACAGTGCCATTGTTGACCGTGGTTCTTAAAGGCAGGGTCTGCAAGAGCTGGTCCTCTTaGTGTTACTTTTGGTTGCTG +
Preference number: 4 (lower is better)
Translates to: FFGNTVPLLTVVLKGRVCKSWSS*CYFWLL
Trigger: CAGCAACCAAAAGTAACATCAAGAGGACCAGCTCTT...GCAGACCCTGCCTTTAAGAACCACGGTCAACAATGGCACTGTGTTACCAAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555096.5
CDS-3UTR TCA 90 bp CTGTGTCATATATTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGAGACCCATTCCAGCTTaGGTCTCTTGGTTGGAAGTT +
Preference number: 4 (lower is better)
Translates to: LCHILYNKSEHGTADPLWRPIPA*VSWLEV
Trigger: AACTTCCAACCAAGAGACTCAAGCTGGAATGGGTCT...CCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATGACACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR TCA 90 bp ATGGTAATTAGGCCAAATCCTTTATGGTTATCTCCCCTGATGAATGCTTCCACGGTGATCCGATCAGGATaGACTGCTAGGCACTTCACG +
Preference number: 4 (lower is better)
Translates to: MVIRPNPLWLSPLMNASTVIRSG*TARHFT
Trigger: CGTGAAGTGCCTAGCAGTTCATCCTGATCGGATCAC...CGTGGAAGCATTCATCAGGGGAGATAACCATAAAGGATTTGGCCTAATTACCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262233.11
ENST00000649352.1
CDS-3UTR TCA 90 bp TTGCCACTTGAATCTCCAGTAATGGTGTCACCGTTTTCAGAGAAAGTCACACAGGTCCTGTTGCTATCGTaGTCCGATCAGGATGAACTG +
Preference number: 4 (lower is better)
Translates to: LPLESPVMVSPFSEKVTQVLLLS*SDQDEL
Trigger: CAGTTCATCCTGATCGGATCACGATAGCAACAGGAC...CTGTGTGACTTTCTCTGAAAACGGTGACACCATTACTGGAGATTCAAGTGGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554553.5
CDS-3UTR TCA 90 bp CAAGAAGGTGGCAAAATGTCTCACCGTGAATCAGGGCGTGTGAACAAGGGATGGTCCTCCATTAGATTTTaGGAATGCAATACAGGTGAC +
Preference number: 4 (lower is better)
Translates to: QEGGKMSHRESGRVNKGWSSIRF*ECNTGD
Trigger: GTCACCTGTATTGCATTCTCAAAATCTAATGGAGGA...CCATCCCTTGTTCACACGCCCTGATTCACGGTGAGACATTTTGCCACCTTCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR TCA 90 bp GGTAGCCCATTCAATGTCTCTTGTAGTTTCCACACTTACGACTTGCTTACAGGCCCACAGGTCAAGAACTaGGATTTTGAGGCATGGATG +
Preference number: 4 (lower is better)
Translates to: GSPFNVSCSFHTYDLLTGPQVKN*DFEAWM
Trigger: CATCCATGCCTCAAAATCTCAGTTCTTGACCTGTGG...GCCTGTAAGCAAGTCGTAAGTGTGGAAACTACAAGAGACATTGAATGGGCTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557313.5
CDS-3UTR TCA 90 bp TTAAACAAAACAGAAATCACAGTGACCAAGGGTAATGCGAGTCTGTGTCTTCCTCAAACCACCTCCCAGTaGGTGTTCCGACTGCAACCA +
Preference number: 4 (lower is better)
Translates to: LNKTEITVTKGNASLCLPQTTSQ*VFRLQP
Trigger: TGGTTGCAGTCGGAACACTCACTGGGAGGTGGTTTG...AGGAAGACACAGACTCGCATTACCCTTGGTCACTGTGATTTCTGTTTTGTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR TCA 90 bp AAGTCAGTTAGGAGTAGAGTCTGCTTAGCACAAGAGGGATACAAGCCCTCTCTCTCGTTTCCATCTGTGTaGACGGTGACCAAGTCTTTT +
Preference number: 4 (lower is better)
Translates to: KSVRSRVCLAQEGYKPSLSFPSV*TVTKSF
Trigger: AAAAGACTTGGTCACCGTTCACACAGATGGAAACGA...GAGAGAGGGCTTGTATCCCTCTTGTGCTAAGCAGACTCTACTCCTAACTGACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR TCA 90 bp AAGTCAGTTAGGAGTAGAGTCTGCTTAGCACAAGAGGGATACAAGCCCTCTCTCGAAATTCCCATCTGGTaGGTATCGCATTACAGAGAG +
Preference number: 4 (lower is better)
Translates to: KSVRSRVCLAQEGYKPSLEIPIW*VSHYRE
Trigger: CTCTCTGTAATGCGATACTCACCAGATGGGAATTTC...GAGAGAGGGCTTGTATCCCTCTTGTGCTAAGCAGACTCTACTCCTAACTGACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR TCA 90 bp AACGTTGCAACCTTGTTGGTATTCAATGTGCACTGTGTCATATATTGTACAACATGTGGCTTGGAGCCCTaGACTGCGAGCAGGGGTATG +
Preference number: 4 (lower is better)
Translates to: NVATLLVFNVHCVIYCTTCGLEP*TASRGM
Trigger: CATACCCCTGCTCGCAGTTCAGGGCTCCAAGCCACA...TGTTGTACAATATATGACACAGTGCACATTGAATACCAACAAGGTTGCAACGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR TCA 90 bp CTGTGTCATATATTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGTGGATAAGGCCTTCTTaGCAAATTTCTGCCACCTCC +
Preference number: 4 (lower is better)
Translates to: LCHILYNKSEHGTADPLWWIRPS*QISATS
Trigger: GGAGGTGGCAGAAATTTGTCAAGAAGGCCTTATCCA...CCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATGACACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR TCA 90 bp CTGTGTCATATATTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGGTGTGTGGGGAAGTGTaGAAGTCTGTGAATCACTGT +
Preference number: 4 (lower is better)
Translates to: LCHILYNKSEHGTADPLWVCGEV*KSVNHC
Trigger: ACAGTGATTCACAGACTTTCACACTTCCCCACACAC...CCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATGACACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327921.13
CDS-3UTR TCA 90 bp AACGTTGCAACCTTGTTGGTATTCAATGTGCACTGTGTCATATATTGTACAACAAAGGCCCTGCCTCAGTaGGACTTAGCACGGGACTGG +
Preference number: 4 (lower is better)
Translates to: NVATLLVFNVHCVIYCTTKALPQ*DLARDW
Trigger: CCAGTCCCGTGCTAAGTCTCACTGAGGCAGGGCCTT...TGTTGTACAATATATGACACAGTGCACATTGAATACCAACAAGGTTGCAACGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649352.1
CDS-3UTR TCA 90 bp AGACATTTCCAACCAATACTTCCCAGCTTAACATGGTGGAAGGAGCACAGATTTAAGGAGCACAGATTTTaGGGCCAGCTGGATCCGTGT +
Preference number: 4 (lower is better)
Translates to: RHFQPILPSLTWWKEHRFKEHRF*GQLDPC
Trigger: ACACGGATCCAGCTGGCCTCAAAATCTGTGCTCCTT...AAATCTGTGCTCCTTCCACCATGTTAAGCTGGGAAGTATTGGTTGGAAATGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557741.1
CDS-3UTR GCA 90 bp TTAAACAAAACAGAAATCACAGTGACCAAGGGTAATGCGAGTCTGTGTCTTCCTGCTCCAGTGAAGCAATaGGGTCTGTCACCTCCATGC +
Preference number: 4 (lower is better)
Translates to: LNKTEITVTKGNASLCLPAPVKQ*GLSPPC
Trigger: GCATGGAGGTGACAGACCGCATTGCTTCACTGGAGC...AGGAAGACACAGACTCGCATTACCCTTGGTCACTGTGATTTCTGTTTTGTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp ATGGTAATTAGGCCAAATCCTTTATGGTTATCTCCCCTGATGAATGCTTCCACGTGCATCTGGACTCTCTaGTCCAGTGAAGCAATGCGG +
Preference number: 4 (lower is better)
Translates to: MVIRPNPLWLSPLMNASTCIWTL*SSEAMR
Trigger: CCGCATTGCTTCACTGGAGCAGAGAGTCCAGATGCA...CGTGGAAGCATTCATCAGGGGAGATAACCATAAAGGATTTGGCCTAATTACCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262233.11
ENST00000649352.1
CDS-3UTR GCA 90 bp CTGTGTCATATATTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGCTGTTAAGCACGGCCTaGTGTTCCTCAGTAATGTTC +
Preference number: 4 (lower is better)
Translates to: LCHILYNKSEHGTADPLWLLSTA*CSSVMF
Trigger: GAACATTACTGAGGAACAGCAGGCCGTGCTTAACAG...CCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATGACACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp AATTTCTGCCACCTCCGTTTAACGCATCAGAACTCAATCTTATCTCATACTGTATGCTGGTGGAGCCTGTaGGATTCCGGTTTCCTCTGG +
Preference number: 4 (lower is better)
Translates to: NFCHLRLTHQNSILSHTVCWWSL*DSGFLW
Trigger: CCAGAGGAAACCGGAATCGCACAGGCTCCACCAGCA...TACAGTATGAGATAAGATTGAGTTCTGATGCGTTAAACGGAGGTGGCAGAAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp AATTTCTGCCACCTCCGTTTAACGCATCAGAACTCAATCTTATCTCATACTGTATGCCACTGGAAGAGCTaGTGGTGGAGCCTGTGCGAT +
Preference number: 4 (lower is better)
Translates to: NFCHLRLTHQNSILSHTVCHWKS*WWSLCD
Trigger: ATCGCACAGGCTCCACCAGCAGCTCTTCCAGTGGCA...TACAGTATGAGATAAGATTGAGTTCTGATGCGTTAAACGGAGGTGGCAGAAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp TTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGCGCCCGCTGACATTCTCGAATAATCCTTaGTTCTTATTAAGGGAGCTT +
Preference number: 4 (lower is better)
Translates to: LYNKSEHGTADPLWRPLTFSNNP*FLLREL
Trigger: AAGCTCCCTTAATAAGAAGCAAGGATTATTCGAGAA...TGTCAGCGGGCGCCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp CATATATTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGCGCCCGCGCCATATATATAGATaGAGTTGTCATGTGAGCCTA +
Preference number: 4 (lower is better)
Translates to: HILYNKSEHGTADPLWRPRHIYR*SCHVSL
Trigger: TAGGCTCACATGACAACTGCATCTATATATATGGCG...CGGGCGCCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp TTAAACAAAACAGAAATCACAGTGACCAAGGGTAATGCGAGTCTGTGTCTTCCTAATGACCCGAGCACTTaGCCACTCGCGTGTACTTCC +
Preference number: 4 (lower is better)
Translates to: LNKTEITVTKGNASLCLPNDPST*PLACTS
Trigger: GGAAGTACACGCGAGTGGGCAAGTGCTCGGGTCATT...AGGAAGACACAGACTCGCATTACCCTTGGTCACTGTGATTTCTGTTTTGTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp CCACACTCCAAAAACATGGAATCCCAAAGTGCAGGTATAGGTAGCCCATTCAATTCCACACTTACGACTTaGTTACAGGCAGAGGGAACC +
Preference number: 4 (lower is better)
Translates to: PHSKNMESQSAGIGSPFNSTLTT*LQAEGT
Trigger: GGTTCCCTCTGCCTGTAAGCAAGTCGTAAGTGTGGA...ATTGAATGGGCTACCTATACCTGCACTTTGGGATTCCATGTTTTTGGAGTGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557313.5
CDS-3UTR GCA 90 bp CTGTGTCATATATTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGGTAATGGGTCGCCCATaGACAAAAGACAGGAAAAGC +
Preference number: 4 (lower is better)
Translates to: LCHILYNKSEHGTADPLWVMGRP*TKDRKS
Trigger: GCTTTTCCTGTCTTTTGTGCATGGGCGACCCATTAC...CCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATGACACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CCA 90 bp AACTTGGAAACGCCTGTGTACCCTGCTGAAATATTGAAGTCAGTTAGGAGTAGACAGGGTCTGCATCAGTaGTCTTGCTTTGGTAGGTCC +
Preference number: 4 (lower is better)
Translates to: NLETPVYPAEILKSVRSRQGLHQ*SCFGRS
Trigger: GGACCTACCAAAGCAAGACCACTGATGCAGACCCTG...TCTACTCCTAACTGACTTCAATATTTCAGCAGGGTACACAGGCGTTTCCAAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CCA 90 bp TTGAGTATGGTAATTAGGCCAAATCCTTTATGGTTATCTCCCCTGATGAATGCTCACTGGAAGAGCTGCTaGTGGAGCCTGTGCGATTCC +
Preference number: 4 (lower is better)
Translates to: LSMVIRPNPLWLSPLMNAHWKSC*WSLCDS
Trigger: GGAATCGCACAGGCTCCACCAGCAGCTCTTCCAGTG...AGCATTCATCAGGGGAGATAACCATAAAGGATTTGGCCTAATTACCATACTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262233.11
ENST00000649352.1
CDS-3UTR CCA 90 bp CAAGAAGGTGGCAAAATGTCTCACCGTGAATCAGGGCGTGTGAACAAGGGATGGCTTGAGTCTCTTGGTTaGAAGTTCTACTTTTGCTTC +
Preference number: 4 (lower is better)
Translates to: QEGGKMSHRESGRVNKGWLESLG*KFYFCF
Trigger: GAAGCAAAAGTAGAACTTCCAACCAAGAGACTCAAG...CCATCCCTTGTTCACACGCCCTGATTCACGGTGAGACATTTTGCCACCTTCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CCA 90 bp AGCCTCCCCAAGGGAGAATGCAATGAAACTTTGGAAAATGTAACCAAACACAGTTCCGTCCGAGCCTTCTaGCCACACTCCAAAAACATG +
Preference number: 4 (lower is better)
Translates to: SLPKGECNETLENVTKHSSVRAF*PHSKNM
Trigger: CATGTTTTTGGAGTGTGGCCAGAAGGCTCGGACGGA...ACTGTGTTTGGTTACATTTTCCAAAGTTTCATTGCATTCTCCCTTGGGGAGGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CCA 90 bp AGCCTCCCCAAGGGAGAATGCAATGAAACTTTGGAAAATGTAACCAAACACAGTAGGAGTTTCTTCTCATaGGCCCGACAGACGGCATTG +
Preference number: 4 (lower is better)
Translates to: SLPKGECNETLENVTKHSRSFFS*ARQTAL
Trigger: CAATGCCGTCTGTCGGGCCCATGAGAAGAAACTCCT...ACTGTGTTTGGTTACATTTTCCAAAGTTTCATTGCATTCTCCCTTGGGGAGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CCA 90 bp AATATCATCTCATGCCAAGTAATATACACAAGAAGGTGGCAAAATGTCTCACCGGCCGTAGATGTGGCTTaGAGCCCTGAACTGCGAGCA +
Preference number: 4 (lower is better)
Translates to: NIISCQVIYTRRWQNVSPAVDVA*SPELRA
Trigger: TGCTCGCAGTTCAGGGCTCCAAGCCACATCTACGGC...CGGTGAGACATTTTGCCACCTTCTTGTGTATATTACTTGGCATGAGATGATATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CCA 90 bp AGTCTCATCTGCAAACTACAGTCTCATCTGCAAATGGCCCAGGTGAGAATAAAACCCGTGGAGATGAGGTaGCTGTCTTCACAGAGGAAA +
Preference number: 4 (lower is better)
Translates to: SLICKLQSHLQMAQVRIKPVEMR*LSSQRK
Trigger: TTTCCTCTGTGAAGACAGCCACCTCATCTCCACGGG...TTTTATTCTCACCTGGGCCATTTGCAGATGAGACTGTAGTTTGCAGATGAGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262233.11
ENST00000649352.1
CDS-3UTR CCA 90 bp ATGGTAATTAGGCCAAATCCTTTATGGTTATCTCCCCTGATGAATGCTTCCACGCCCGTGGAGATGAGGTaGCTGTCTTCACAGAGGAAA +
Preference number: 4 (lower is better)
Translates to: MVIRPNPLWLSPLMNASTPVEMR*LSSQRK
Trigger: TTTCCTCTGTGAAGACAGCCACCTCATCTCCACGGG...CGTGGAAGCATTCATCAGGGGAGATAACCATAAAGGATTTGGCCTAATTACCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262233.11
ENST00000649352.1
CDS-3UTR CCA 90 bp CTGTGTCATATATTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGCTCTCTGCAGGTTTATaGTACGCTCGAGAGAGATCT +
Preference number: 4 (lower is better)
Translates to: LCHILYNKSEHGTADPLWLSAGL*YARERS
Trigger: AGATCTCTCTCGAGCGTACCATAAACCTGCAGAGAG...CCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATGACACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CCA 90 bp TGTGAAGAGGCTGACCGCATCTGGTTAGGCAGGACGGTGTCACTGAAACTTGGACCTCTTGATGTTACTTaGTGTCGATCTATTCAGTTT +
Preference number: 4 (lower is better)
Translates to: CEEADRIWLGRTVSLKLGPLDVT*CRSIQF
Trigger: AAACTGAATAGATCGACACCAAGTAACATCAAGAGG...TCCAAGTTTCAGTGACACCGTCCTGCCTAACCAGATGCGGTCAGCCTCTTCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CCA 90 bp TTAAACAAAACAGAAATCACAGTGACCAAGGGTAATGCGAGTCTGTGTCTTCCTGTAGGAACCTATCTGTaGGGATGGCCTGTGACCGCT +
Preference number: 4 (lower is better)
Translates to: LNKTEITVTKGNASLCLPVGTYL*GWPVTA
Trigger: AGCGGTCACAGGCCATCCCCACAGATAGGTTCCTAC...AGGAAGACACAGACTCGCATTACCCTTGGTCACTGTGATTTCTGTTTTGTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327921.13
CDS-3UTR TCA 90 bp GGCTATAATGTAAACGTTGCAACCTTGTTGGTATTCAATGTGCACTGTGTCATAGACTCTCTGCTCCAGTaGAGCAATGCGGTCTGTCAC +
Preference number: 4 (lower is better)
Translates to: GYNVNVATLLVFNVHCVIDSLLQ*SNAVCH
Trigger: GTGACAGACCGCATTGCTTCACTGGAGCAGAGAGTC...TATGACACAGTGCACATTGAATACCAACAAGGTTGCAACGTTTACATTATAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR TCA 90 bp GACAAATTTCTGCCACCTCCGTTTAACGCATCAGAACTCAATCTTATCTCATACGTGATCCGATCAGGATaGACTGCTAGGCACTTCACG +
Preference number: 4 (lower is better)
Translates to: DKFLPPPFNASELNLISYVIRSG*TARHFT
Trigger: CGTGAAGTGCCTAGCAGTTCATCCTGATCGGATCAC...GTATGAGATAAGATTGAGTTCTGATGCGTTAAACGGAGGTGGCAGAAATTTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR TCA 90 bp TCAGAACTCAATCTTATCTCATACTGTAATGGGTCGCCCATGCACAAAAGACAGGTCCTGTTGCTATCGTaGTCCGATCAGGATGAACTG +
Preference number: 4 (lower is better)
Translates to: SELNLISYCNGSPMHKRQVLLLS*SDQDEL
Trigger: CAGTTCATCCTGATCGGATCACGATAGCAACAGGAC...CTGTCTTTTGTGCATGGGCGACCCATTACAGTATGAGATAAGATTGAGTTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR TCA 90 bp GTAACTATGATGTTGGTGTCCGTGGGGTGGAAATCCGCAGCAAACACAGCTTCATCCTCCATTAGATTTTaGGAATGCAATACAGGTGAC +
Preference number: 4 (lower is better)
Translates to: VTMMLVSVGWKSAANTASSSIRF*ECNTGD
Trigger: GTCACCTGTATTGCATTCTCAAAATCTAATGGAGGA...TGAAGCTGTGTTTGCTGCGGATTTCCACCCCACGGACACCAACATCATAGTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554553.5
CDS-3UTR TCA 90 bp CTGTGTCATATATTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGGAAATTCCCATCTGGTaGGTATCGCATTACAGAGAG +
Preference number: 4 (lower is better)
Translates to: LCHILYNKSEHGTADPLWEIPIW*VSHYRE
Trigger: CTCTCTGTAATGCGATACTCACCAGATGGGAATTTC...CCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATGACACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp TTAAACAAAACAGAAATCACAGTGACCAAGGGTAATGCGAGTCTGTGTCTTCCTCACCTCCATGCTACTTaGAGCAGAAGCGCTGTCATC +
Preference number: 4 (lower is better)
Translates to: LNKTEITVTKGNASLCLPHLHAT*SRSAVI
Trigger: GATGACAGCGCTTCTGCTGCAAGTAGCATGGAGGTG...AGGAAGACACAGACTCGCATTACCCTTGGTCACTGTGATTTCTGTTTTGTTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
CDS-3UTR GCA 90 bp AATTTCTGCCACCTCCGTTTAACGCATCAGAACTCAATCTTATCTCATACTGTAGCTCCAGTGAAGCAATaGGGTCTGTCACCTCCATGC +
Preference number: 4 (lower is better)
Translates to: NFCHLRLTHQNSILSHTVAPVKQ*GLSPPC
Trigger: GCATGGAGGTGACAGACCGCATTGCTTCACTGGAGC...TACAGTATGAGATAAGATTGAGTTCTGATGCGTTAAACGGAGGTGGCAGAAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp AATATCATCTCATGCCAAGTAATATACACAAGAAGGTGGCAAAATGTCTCACCGCTCTGGAATCCCCATTaGTTTCCCTTCGACCCCCAG +
Preference number: 4 (lower is better)
Translates to: NIISCQVIYTRRWQNVSPLWNPH*FPFDPQ
Trigger: CTGGGGGTCGAAGGGAAAGCAATGGGGATTCCAGAG...CGGTGAGACATTTTGCCACCTTCTTGTGTATATTACTTGGCATGAGATGATATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp CTGTGTCATATATTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGCAGGCTCCTTGGGTTTaGTTTCACTGTTCTTTTTGC +
Preference number: 4 (lower is better)
Translates to: LCHILYNKSEHGTADPLWQAPWV*FHCSFC
Trigger: GCAAAAAGAACAGTGAAAGCAAACCCAAGGAGCCTG...CCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATGACACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp TCAGAACTCAATCTTATCTCATACTGTAATGGGTCGCCCATGCACAAAAGACAGTTCCATCCTTCGATGTaGCCGCAACTTGTCCTGTTG +
Preference number: 4 (lower is better)
Translates to: SELNLISYCNGSPMHKRQFHPSM*PQLVLL
Trigger: CAACAGGACAAGTTGCGGGCACATCGAAGGATGGAA...CTGTCTTTTGTGCATGGGCGACCCATTACAGTATGAGATAAGATTGAGTTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp AACTTGGAAACGCCTGTGTACCCTGCTGAAATATTGAAGTCAGTTAGGAGTAGATACAAAGTGCAAAAATaGCACCCTCATGGGCCCCCT +
Preference number: 4 (lower is better)
Translates to: NLETPVYPAEILKSVRSRYKVQK*HPHGPP
Trigger: AGGGGGCCCATGAGGGTGGCATTTTTGCACTTTGTA...TCTACTCCTAACTGACTTCAATATTTCAGCAGGGTACACAGGCGTTTCCAAGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp AGCCTCCCCAAGGGAGAATGCAATGAAACTTTGGAAAATGTAACCAAACACAGTTCCACACTTACGACTTaGTTACAGGCAGAGGGAACC +
Preference number: 4 (lower is better)
Translates to: SLPKGECNETLENVTKHSSTLTT*LQAEGT
Trigger: GGTTCCCTCTGCCTGTAAGCAAGTCGTAAGTGTGGA...ACTGTGTTTGGTTACATTTTCCAAAGTTTCATTGCATTCTCCCTTGGGGAGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp AACGTTGCAACCTTGTTGGTATTCAATGTGCACTGTGTCATATATTGTACAACATGTCTTCCTTGCCCATaGTGCTCCCCACAGCTCTCG +
Preference number: 4 (lower is better)
Translates to: NVATLLVFNVHCVIYCTTCLPCP*CSPQLS
Trigger: CGAGAGCTGTGGGGAGCAGCATGGGCAAGGAAGACA...TGTTGTACAATATATGACACAGTGCACATTGAATACCAACAAGGTTGCAACGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp CTGTGTCATATATTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGGTTAGGAGTAGAGTCTaGTTAGCACAAGAGGGATAC +
Preference number: 4 (lower is better)
Translates to: LCHILYNKSEHGTADPLWVRSRV*LAQEGY
Trigger: GTATCCCTCTTGTGCTAAGCAGACTCTACTCCTAAC...CCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATGACACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp CTGCCACCTCCGTTTAACGCATCAGAACTCAATCTTATCTCATACTGTAATGGGGTAATGGGTCGCCCATaGACAAAAGACAGGAAAAGC +
Preference number: 4 (lower is better)
Translates to: LPPPFNASELNLISYCNGVMGRP*TKDRKS
Trigger: GCTTTTCCTGTCTTTTGTGCATGGGCGACCCATTAC...CCCATTACAGTATGAGATAAGATTGAGTTCTGATGCGTTAAACGGAGGTGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp TTAAACAAAACAGAAATCACAGTGACCAAGGGTAATGCGAGTCTGTGTCTTCCTTCCCATCCAGGCTCCTaGTTTCTGCCACAAGATCCT +
Preference number: 4 (lower is better)
Translates to: LNKTEITVTKGNASLCLPSHPGS*FLPQDP
Trigger: AGGATCTTGTGGCAGAAAGCAGGAGCCTGGATGGGA...AGGAAGACACAGACTCGCATTACCCTTGGTCACTGTGATTTCTGTTTTGTTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327921.13
CDS-3UTR CCA 90 bp GACAAATTTCTGCCACCTCCGTTTAACGCATCAGAACTCAATCTTATCTCATACCAGGGTCTGCATCAGTaGTCTTGCTTTGGTAGGTCC +
Preference number: 4 (lower is better)
Translates to: DKFLPPPFNASELNLISYQGLHQ*SCFGRS
Trigger: GGACCTACCAAAGCAAGACCACTGATGCAGACCCTG...GTATGAGATAAGATTGAGTTCTGATGCGTTAAACGGAGGTGGCAGAAATTTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CCA 90 bp TTAAACAAAACAGAAATCACAGTGACCAAGGGTAATGCGAGTCTGTGTCTTCCTTTGGTGTCCGTGGGGTaGAAATCCGCAGCAAACACA +
Preference number: 4 (lower is better)
Translates to: LNKTEITVTKGNASLCLPLVSVG*KSAANT
Trigger: TGTGTTTGCTGCGGATTTCCACCCCACGGACACCAA...AGGAAGACACAGACTCGCATTACCCTTGGTCACTGTGATTTCTGTTTTGTTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CCA 90 bp GACAAATTTCTGCCACCTCCGTTTAACGCATCAGAACTCAATCTTATCTCATACTTGGTGTCCGTGGGGTaGAAATCCGCAGCAAACACA +
Preference number: 4 (lower is better)
Translates to: DKFLPPPFNASELNLISYLVSVG*KSAANT
Trigger: TGTGTTTGCTGCGGATTTCCACCCCACGGACACCAA...GTATGAGATAAGATTGAGTTCTGATGCGTTAAACGGAGGTGGCAGAAATTTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CCA 90 bp CATATATTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGCGCCCGACAGAGGACAAACTTTaGCTTTTCTTGTTTCTCGAA +
Preference number: 4 (lower is better)
Translates to: HILYNKSEHGTADPLWRPTEDKL*LFLFLE
Trigger: TTCGAGAAACAAGAAAAGCCAAAGTTTGTCCTCTGT...CGGGCGCCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CCA 90 bp AAGTCAGTTAGGAGTAGAGTCTGCTTAGCACAAGAGGGATACAAGCCCTCTCTCTGGACCAAACTGTTCTaGAATCTCCGTTTTACGAAG +
Preference number: 4 (lower is better)
Translates to: KSVRSRVCLAQEGYKPSLWTKLF*NLRFTK
Trigger: CTTCGTAAAACGGAGATTCCAGAACAGTTTGGTCCA...GAGAGAGGGCTTGTATCCCTCTTGTGCTAAGCAGACTCTACTCCTAACTGACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CCA 90 bp ATGGAATCCCAAAGTGCAGGTATAGGTAGCCCATTCAATGTCTCTTGTAGTTTCATTTTGAGGCATGGATaGCCAGTCCCCAGAGCTCAT +
Preference number: 4 (lower is better)
Translates to: MESQSAGIGSPFNVSCSFILRHG*PVPRAH
Trigger: ATGAGCTCTGGGGACTGGCCATCCATGCCTCAAAAT...GAAACTACAAGAGACATTGAATGGGCTACCTATACCTGCACTTTGGGATTCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557313.5
CDS-3UTR CCA 90 bp AGTCTCATCTGCAAACTACAGTCTCATCTGCAAATGGCCCAGGTGAGAATAAAAATTTTGAGGCATGGATaGCCAGTCCCCAGAGCTCAT +
Preference number: 4 (lower is better)
Translates to: SLICKLQSHLQMAQVRIKILRHG*PVPRAH
Trigger: ATGAGCTCTGGGGACTGGCCATCCATGCCTCAAAAT...TTTTATTCTCACCTGGGCCATTTGCAGATGAGACTGTAGTTTGCAGATGAGACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262233.11
ENST00000649352.1
CDS-3UTR CCA 90 bp TTAAACAAAACAGAAATCACAGTGACCAAGGGTAATGCGAGTCTGTGTCTTCCTCCCGTGGAGATGAGGTaGCTGTCTTCACAGAGGAAA +
Preference number: 4 (lower is better)
Translates to: LNKTEITVTKGNASLCLPPVEMR*LSSQRK
Trigger: TTTCCTCTGTGAAGACAGCCACCTCATCTCCACGGG...AGGAAGACACAGACTCGCATTACCCTTGGTCACTGTGATTTCTGTTTTGTTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CCA 90 bp AATATCATCTCATGCCAAGTAATATACACAAGAAGGTGGCAAAATGTCTCACCGGCCCTTGGTACCTGGTaGAGCCTTTCGAGACTTCTC +
Preference number: 4 (lower is better)
Translates to: NIISCQVIYTRRWQNVSPALGTW*SLSRLL
Trigger: GAGAAGTCTCGAAAGGCTCCACCAGGTACCAAGGGC...CGGTGAGACATTTTGCCACCTTCTTGTGTATATTACTTGGCATGAGATGATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CCA 90 bp CTGCCACCTCCGTTTAACGCATCAGAACTCAATCTTATCTCATACTGTAATGGGATACATGGTGTTTACTaGTGCCCTGCACTTCTGCAG +
Preference number: 4 (lower is better)
Translates to: LPPPFNASELNLISYCNGIHGVY*CPALLQ
Trigger: CTGCAGAAGTGCAGGGCACCAGTAAACACCATGTAT...CCCATTACAGTATGAGATAAGATTGAGTTCTGATGCGTTAAACGGAGGTGGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
3UTR CAA 72 bp CCATTCAATGTCTCTTGTAGTTTCCACACTTACGACTaGCTTACAGGCAGAGGGAACCCAGTAGAGGATTTC +
Preference number: 4 (lower is better)
Translates to: PFNVSCSFHTYD*LTGRGNPVEDF
Trigger: GAAATCCTCTACTGGGTTCCCTCTGCCTGTAAGCAAGTCGTAAGTGTGGAAACTACAAGAGACATTGAATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557313.5
CDS-3UTR TCA 90 bp TTAAACAAAACAGAAATCACAGTGACCAAGGGTAATGCGAGTCTGTGTCTTCCTCAGCTAGAGCTGATTTaGGCAGCTGGATGTCGTCTT +
Preference number: 4 (lower is better)
Translates to: LNKTEITVTKGNASLCLPQLELI*AAGCRL
Trigger: AAGACGACATCCAGCTGCTCAAATCAGCTCTAGCTG...AGGAAGACACAGACTCGCATTACCCTTGGTCACTGTGATTTCTGTTTTGTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR TCA 90 bp TCAGAACTCAATCTTATCTCATACTGTAATGGGTCGCCCATGCACAAAAGACAGACACAGTGCCATTGTTaGCCGTGGTTCTTAAAGGCA +
Preference number: 4 (lower is better)
Translates to: SELNLISYCNGSPMHKRQTQCHC*PWFLKA
Trigger: TGCCTTTAAGAACCACGGTCAACAATGGCACTGTGT...CTGTCTTTTGTGCATGGGCGACCCATTACAGTATGAGATAAGATTGAGTTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR TCA 90 bp CTGCTTCATAGACATTTCCAACCAATACTTCCCAGCTTAACATGGTGGAAGGAGAAGAGCTGGTCCTCTTaGTGTTACTTTTGGTTGCTG +
Preference number: 4 (lower is better)
Translates to: LLHRHFQPILPSLTWWKEKSWSS*CYFWLL
Trigger: CAGCAACCAAAAGTAACATCAAGAGGACCAGCTCTT...CTCCTTCCACCATGTTAAGCTGGGAAGTATTGGTTGGAAATGTCTATGAAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557741.1
CDS-3UTR TCA 90 bp AAGTCAGTTAGGAGTAGAGTCTGCTTAGCACAAGAGGGATACAAGCCCTCTCTCTCCTCCATTAGATTTTaGGAATGCAATACAGGTGAC +
Preference number: 4 (lower is better)
Translates to: KSVRSRVCLAQEGYKPSLSSIRF*ECNTGD
Trigger: GTCACCTGTATTGCATTCTCAAAATCTAATGGAGGA...GAGAGAGGGCTTGTATCCCTCTTGTGCTAAGCAGACTCTACTCCTAACTGACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR TCA 90 bp TTAAACAAAACAGAAATCACAGTGACCAAGGGTAATGCGAGTCTGTGTCTTCCTTTCCGCTCCAAGAAATaGGCTTTCGGTCTTTCCCAC +
Preference number: 4 (lower is better)
Translates to: LNKTEITVTKGNASLCLPFRSKK*AFGLSH
Trigger: GTGGGAAAGACCGAAAGCTCATTTCTTGGAGCGGAA...AGGAAGACACAGACTCGCATTACCCTTGGTCACTGTGATTTCTGTTTTGTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR TCA 90 bp TCAGAACTCAATCTTATCTCATACTGTAATGGGTCGCCCATGCACAAAAGACAGCCACAGGTCAAGAACTaGGATTTTGAGGCATGGATG +
Preference number: 4 (lower is better)
Translates to: SELNLISYCNGSPMHKRQPQVKN*DFEAWM
Trigger: CATCCATGCCTCAAAATCTCAGTTCTTGACCTGTGG...CTGTCTTTTGTGCATGGGCGACCCATTACAGTATGAGATAAGATTGAGTTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR TCA 90 bp AACGTTGCAACCTTGTTGGTATTCAATGTGCACTGTGTCATATATTGTACAACACAAACCACCTCCCAGTaGGTGTTCCGACTGCAACCA +
Preference number: 4 (lower is better)
Translates to: NVATLLVFNVHCVIYCTTQTTSQ*VFRLQP
Trigger: TGGTTGCAGTCGGAACACTCACTGGGAGGTGGTTTG...TGTTGTACAATATATGACACAGTGCACATTGAATACCAACAAGGTTGCAACGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR TCA 90 bp CCACACTCCAAAAACATGGAATCCCAAAGTGCAGGTATAGGTAGCCCATTCAATTCGTTTCCATCTGTGTaGACGGTGACCAAGTCTTTT +
Preference number: 4 (lower is better)
Translates to: PHSKNMESQSAGIGSPFNSFPSV*TVTKSF
Trigger: AAAAGACTTGGTCACCGTTCACACAGATGGAAACGA...ATTGAATGGGCTACCTATACCTGCACTTTGGGATTCCATGTTTTTGGAGTGTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557313.5
CDS-3UTR TCA 90 bp AGCCTCCCCAAGGGAGAATGCAATGAAACTTTGGAAAATGTAACCAAACACAGTCAAAATGTCTCACCGTaGATCAGGGCGTGTGAACAA +
Preference number: 4 (lower is better)
Translates to: SLPKGECNETLENVTKHSQNVSP*IRACEQ
Trigger: TTGTTCACACGCCCTGATTCACGGTGAGACATTTTG...ACTGTGTTTGGTTACATTTTCCAAAGTTTCATTGCATTCTCCCTTGGGGAGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR TCA 90 bp AGCCTCCCCAAGGGAGAATGCAATGAAACTTTGGAAAATGTAACCAAACACAGTTGGATAAGGCCTTCTTaGCAAATTTCTGCCACCTCC +
Preference number: 4 (lower is better)
Translates to: SLPKGECNETLENVTKHSWIRPS*QISATS
Trigger: GGAGGTGGCAGAAATTTGTCAAGAAGGCCTTATCCA...ACTGTGTTTGGTTACATTTTCCAAAGTTTCATTGCATTCTCCCTTGGGGAGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR TCA 90 bp ATGGTAATTAGGCCAAATCCTTTATGGTTATCTCCCCTGATGAATGCTTCCACGAAGAGCTGGTCCTCTTaGTGTTACTTGGTGTCGATC +
Preference number: 4 (lower is better)
Translates to: MVIRPNPLWLSPLMNASTKSWSS*CYLVSI
Trigger: GATCGACACCAAGTAACATCAAGAGGACCAGCTCTT...CGTGGAAGCATTCATCAGGGGAGATAACCATAAAGGATTTGGCCTAATTACCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649352.1
CDS-3UTR TCA 90 bp AGTCTCATCTGCAAACTACAGTCTCATCTGCAAATGGCCCAGGTGAGAATAAAATTGAGCGCAGGAGTTTaGTATCAGCCTAGGCAACAT +
Preference number: 4 (lower is better)
Translates to: SLICKLQSHLQMAQVRIKLSAGV*YQPRQH
Trigger: ATGTTGCCTAGGCTGATATCAAACTCCTGCGCTCAA...TTTTATTCTCACCTGGGCCATTTGCAGATGAGACTGTAGTTTGCAGATGAGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649352.1
CDS-3UTR GCA 90 bp AATATCATCTCATGCCAAGTAATATACACAAGAAGGTGGCAAAATGTCTCACCGCACCTCCATGCTACTTaGAGCAGAAGCGCTGTCATC +
Preference number: 4 (lower is better)
Translates to: NIISCQVIYTRRWQNVSPHLHAT*SRSAVI
Trigger: GATGACAGCGCTTCTGCTGCAAGTAGCATGGAGGTG...CGGTGAGACATTTTGCCACCTTCTTGTGTATATTACTTGGCATGAGATGATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262233.11
ENST00000334192.8
CDS-3UTR GCA 90 bp CAATTCCTCAACAGCCATCGTGGTTCAGTACCTCATTATCATCATAAATATTTGGGTCTGTCACCTCCATaGTACTTGCAGCAGAAGCGC +
Preference number: 4 (lower is better)
Translates to: QFLNSHRGSVPHYHHKYLGLSPP*YLQQKR
Trigger: GCGCTTCTGCTGCAAGTAGCATGGAGGTGACAGACC...CAAATATTTATGATGATAATGAGGTACTGAACCACGATGGCTGTTGAGGAATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp TTAAACAAAACAGAAATCACAGTGACCAAGGGTAATGCGAGTCTGTGTCTTCCTTGGATGTCGTCTTCTTaGATCTGGACTCTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: LNKTEITVTKGNASLCLPWMSSS*IWTLCS
Trigger: GGAGCAGAGAGTCCAGATGCAAGAAGACGACATCCA...AGGAAGACACAGACTCGCATTACCCTTGGTCACTGTGATTTCTGTTTTGTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp CAATGTGCACTGTGTCATATATTGTACAACAAAAGTGAACACGGAACCGCTGATCGCAACTTGTCCTGTTaGTATCGTGATCCGATCAGG +
Preference number: 4 (lower is better)
Translates to: QCALCHILYNKSEHGTADRNLSC*YRDPIR
Trigger: CCTGATCGGATCACGATAGCAACAGGACAAGTTGCG...ATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATGACACAGTGCACATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp CACCGTTTTCAGAGAAAGTCACACAGAGGACAAACTTTGGCTTTTCTTGTTTCTCGCAACTTGTCCTGTTaGTATCGTGATCCGATCAGG +
Preference number: 4 (lower is better)
Translates to: HRFQRKSHRGQTLAFLVSRNLSC*YRDPIR
Trigger: CCTGATCGGATCACGATAGCAACAGGACAAGTTGCG...AGAAACAAGAAAAGCCAAAGTTTGTCCTCTGTGTGACTTTCTCTGAAAACGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554553.5
CDS-3UTR GCA 90 bp TTAAACAAAACAGAAATCACAGTGACCAAGGGTAATGCGAGTCTGTGTCTTCCTCGCAACTTGTCCTGTTaGTATCGTGATCCGATCAGG +
Preference number: 4 (lower is better)
Translates to: LNKTEITVTKGNASLCLPRNLSC*YRDPIR
Trigger: CCTGATCGGATCACGATAGCAACAGGACAAGTTGCG...AGGAAGACACAGACTCGCATTACCCTTGGTCACTGTGATTTCTGTTTTGTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp CACCGTTTTCAGAGAAAGTCACACAGAGGACAAACTTTGGCTTTTCTTGTTTCTTTCCATCCTTCGATGTaGCCGCAACTTGTCCTGTTG +
Preference number: 4 (lower is better)
Translates to: HRFQRKSHRGQTLAFLVSFHPSM*PQLVLL
Trigger: CAACAGGACAAGTTGCGGGCACATCGAAGGATGGAA...AGAAACAAGAAAAGCCAAAGTTTGTCCTCTGTGTGACTTTCTCTGAAAACGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554553.5
CDS-3UTR GCA 90 bp CAAGAAGGTGGCAAAATGTCTCACCGTGAATCAGGGCGTGTGAACAAGGGATGGTTCTCGAATAATCCTTaGTTCTTATTAAGGGAGCTT +
Preference number: 4 (lower is better)
Translates to: QEGGKMSHRESGRVNKGWFSNNP*FLLREL
Trigger: AAGCTCCCTTAATAAGAAGCAAGGATTATTCGAGAA...CCATCCCTTGTTCACACGCCCTGATTCACGGTGAGACATTTTGCCACCTTCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp CTGCCACCTCCGTTTAACGCATCAGAACTCAATCTTATCTCATACTGTAATGGGATGGGCCCCCTGAACTaGATAGCTTATTCGATTTGT +
Preference number: 4 (lower is better)
Translates to: LPPPFNASELNLISYCNGMGPLN*IAYSIC
Trigger: ACAAATCGAATAAGCTATGCAGTTCAGGGGGCCCAT...CCCATTACAGTATGAGATAAGATTGAGTTCTGATGCGTTAAACGGAGGTGGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp CTGTGTCATATATTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGCAAAGTTTCGAGTTGTaGCAATCAAGATCACATCGC +
Preference number: 4 (lower is better)
Translates to: LCHILYNKSEHGTADPLWQSFEL*QSRSHR
Trigger: GCGATGTGATCTTGATTGGCACAACTCGAAACTTTG...CCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATGACACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp AATATCATCTCATGCCAAGTAATATACACAAGAAGGTGGCAAAATGTCTCACCGAGTCCCCTGACAGAGTaGCCTGCAGGACAAAGTTTC +
Preference number: 4 (lower is better)
Translates to: NIISCQVIYTRRWQNVSPSPLTE*PAGQSF
Trigger: GAAACTTTGTCCTGCAGGGCACTCTGTCAGGGGACT...CGGTGAGACATTTTGCCACCTTCTTGTGTATATTACTTGGCATGAGATGATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp CAATGTGCACTGTGTCATATATTGTACAACAAAAGTGAACACGGAACCGCTGATAGAAGAGGTGCACTTTaGCAAAGTCGTCGCCTGTTG +
Preference number: 4 (lower is better)
Translates to: QCALCHILYNKSEHGTADRRGAL*QSRRLL
Trigger: CAACAGGCGACGACTTTGGCAAAGTGCACCTCTTCT...ATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATGACACAGTGCACATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp TTAAACAAAACAGAAATCACAGTGACCAAGGGTAATGCGAGTCTGTGTCTTCCTGGGTATGAGAAGAGGTaGACTTTGCCAAAGTCGTCG +
Preference number: 4 (lower is better)
Translates to: LNKTEITVTKGNASLCLPGYEKR*TLPKSS
Trigger: CGACGACTTTGGCAAAGTGCACCTCTTCTCATACCC...AGGAAGACACAGACTCGCATTACCCTTGGTCACTGTGATTTCTGTTTTGTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp AACGTTGCAACCTTGTTGGTATTCAATGTGCACTGTGTCATATATTGTACAACACTTGGAGCCCTGAACTaGGAGCAGGGGTATGAGAAG +
Preference number: 4 (lower is better)
Translates to: NVATLLVFNVHCVIYCTTLGALN*EQGYEK
Trigger: CTTCTCATACCCCTGCTCGCAGTTCAGGGCTCCAAG...TGTTGTACAATATATGACACAGTGCACATTGAATACCAACAAGGTTGCAACGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CCA 90 bp AATTTCTGCCACCTCCGTTTAACGCATCAGAACTCAATCTTATCTCATACTGTACAGGGTCTGCATCAGTaGTCTTGCTTTGGTAGGTCC +
Preference number: 4 (lower is better)
Translates to: NFCHLRLTHQNSILSHTVQGLHQ*SCFGRS
Trigger: GGACCTACCAAAGCAAGACCACTGATGCAGACCCTG...TACAGTATGAGATAAGATTGAGTTCTGATGCGTTAAACGGAGGTGGCAGAAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CCA 90 bp AGAGCTGGTCCTCTTGATGTTACTTTTGGTTGCTGGCACAGCAGTTTCTTTCCTGTTACTTTTGGTTGCTaGCACAGCAGTTTCTTTCCT +
Preference number: 4 (lower is better)
Translates to: RAGPLDVTFGCWHSSFFPVTFGC*HSSFFP
Trigger: AGGAAAGAAACTGCTGTGCCAGCAACCAAAAGTAAC...AGGAAAGAAACTGCTGTGCCAGCAACCAAAAGTAACATCAAGAGGACCAGCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555096.5
CDS-3UTR CCA 90 bp CAAGGATACATACAAACAGATTCATCTTCAATAATACATGGTGTTTACTGGTGCTGGAAGAGCTGCTGGTaGAGCCTGTGCGATTCCGGT +
Preference number: 4 (lower is better)
Translates to: QGYIQTDSSSIIHGVYWCWKSCW*SLCDSG
Trigger: ACCGGAATCGCACAGGCTCCACCAGCAGCTCTTCCA...GCACCAGTAAACACCATGTATTATTGAAGATGAATCTGTTTGTATGTATCCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CCA 90 bp GACAAATTTCTGCCACCTCCGTTTAACGCATCAGAACTCAATCTTATCTCATACCCAGATGCGCACATGTaGGGGCAATTGTTTTCCATC +
Preference number: 4 (lower is better)
Translates to: DKFLPPPFNASELNLISYPDAHM*GQLFSI
Trigger: GATGGAAAACAATTGCCCCCACATGTGCGCATCTGG...GTATGAGATAAGATTGAGTTCTGATGCGTTAAACGGAGGTGGCAGAAATTTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CCA 90 bp CAATGTGCACTGTGTCATATATTGTACAACAAAAGTGAACACGGAACCGCTGATATTTTGAGGCATGGATaGCCAGTCCCCAGAGCTCAT +
Preference number: 4 (lower is better)
Translates to: QCALCHILYNKSEHGTADILRHG*PVPRAH
Trigger: ATGAGCTCTGGGGACTGGCCATCCATGCCTCAAAAT...ATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATGACACAGTGCACATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CCA 90 bp TTTCGTAGTCTCCGGAATTTGACACGAGGAACTGTGAGTTTACAGACCAGTCCACACACTCCAAAAACATaGAATCCCAAAGTGCAGGTA +
Preference number: 4 (lower is better)
Translates to: FRSLRNLTRGTVSLQTSPHTPKT*NPKVQV
Trigger: TACCTGCACTTTGGGATTCCATGTTTTTGGAGTGTG...TGGACTGGTCTGTAAACTCACAGTTCCTCGTGTCAAATTCCGGAGACTACGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557313.5
CDS-3UTR CCA 90 bp GGCTATAATGTAAACGTTGCAACCTTGTTGGTATTCAATGTGCACTGTGTCATACCCGTGGAGATGAGGTaGCTGTCTTCACAGAGGAAA +
Preference number: 4 (lower is better)
Translates to: GYNVNVATLLVFNVHCVIPVEMR*LSSQRK
Trigger: TTTCCTCTGTGAAGACAGCCACCTCATCTCCACGGG...TATGACACAGTGCACATTGAATACCAACAAGGTTGCAACGTTTACATTATAGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CCA 90 bp AATTTCTGCCACCTCCGTTTAACGCATCAGAACTCAATCTTATCTCATACTGTAAAAAGCAGCTGCCCTTaGTACCTGGTGGAGCCTTTC +
Preference number: 4 (lower is better)
Translates to: NFCHLRLTHQNSILSHTVKSSCP*YLVEPF
Trigger: GAAAGGCTCCACCAGGTACCAAGGGCAGCTGCTTTT...TACAGTATGAGATAAGATTGAGTTCTGATGCGTTAAACGGAGGTGGCAGAAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CCA 90 bp GGCTATAATGTAAACGTTGCAACCTTGTTGGTATTCAATGTGCACTGTGTCATAAAAAGCAGCTGCCCTTaGTACCTGGTGGAGCCTTTC +
Preference number: 4 (lower is better)
Translates to: GYNVNVATLLVFNVHCVIKSSCP*YLVEPF
Trigger: GAAAGGCTCCACCAGGTACCAAGGGCAGCTGCTTTT...TATGACACAGTGCACATTGAATACCAACAAGGTTGCAACGTTTACATTATAGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CCA 90 bp ATGGTAATTAGGCCAAATCCTTTATGGTTATCTCCCCTGATGAATGCTTCCACGATACATGGTGTTTACTaGTGCCCTGCACTTCTGCAG +
Preference number: 4 (lower is better)
Translates to: MVIRPNPLWLSPLMNASTIHGVY*CPALLQ
Trigger: CTGCAGAAGTGCAGGGCACCAGTAAACACCATGTAT...CGTGGAAGCATTCATCAGGGGAGATAACCATAAAGGATTTGGCCTAATTACCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262233.11
ENST00000649352.1
CDS-3UTR CCA 90 bp CTGCTTCATAGACATTTCCAACCAATACTTCCCAGCTTAACATGGTGGAAGGAGGCTGGAGACTTTATTTaGGACAAAAGCGACTGCTTC +
Preference number: 4 (lower is better)
Translates to: LLHRHFQPILPSLTWWKEAGDFI*DKSDCF
Trigger: GAAGCAGTCGCTTTTGTCCCAAATAAAGTCTCCAGC...CTCCTTCCACCATGTTAAGCTGGGAAGTATTGGTTGGAAATGTCTATGAAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557741.1
CDS-3UTR TCA 90 bp AATATCATCTCATGCCAAGTAATATACACAAGAAGGTGGCAAAATGTCTCACCGCAGCTAGAGCTGATTTaGGCAGCTGGATGTCGTCTT +
Preference number: 4 (lower is better)
Translates to: NIISCQVIYTRRWQNVSPQLELI*AAGCRL
Trigger: AAGACGACATCCAGCTGCTCAAATCAGCTCTAGCTG...CGGTGAGACATTTTGCCACCTTCTTGTGTATATTACTTGGCATGAGATGATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR TCA 90 bp CAATGTGCACTGTGTCATATATTGTACAACAAAAGTGAACACGGAACCGCTGATACACAGTGCCATTGTTaGCCGTGGTTCTTAAAGGCA +
Preference number: 4 (lower is better)
Translates to: QCALCHILYNKSEHGTADTQCHC*PWFLKA
Trigger: TGCCTTTAAGAACCACGGTCAACAATGGCACTGTGT...ATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATGACACAGTGCACATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR TCA 90 bp AACTTGGAAACGCCTGTGTACCCTGCTGAAATATTGAAGTCAGTTAGGAGTAGAAAGAGCTGGTCCTCTTaGTGTTACTTTTGGTTGCTG +
Preference number: 4 (lower is better)
Translates to: NLETPVYPAEILKSVRSRKSWSS*CYFWLL
Trigger: CAGCAACCAAAAGTAACATCAAGAGGACCAGCTCTT...TCTACTCCTAACTGACTTCAATATTTCAGCAGGGTACACAGGCGTTTCCAAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262233.11
CDS-3UTR TCA 90 bp CAATGTGCACTGTGTCATATATTGTACAACAAAAGTGAACACGGAACCGCTGATAGACCCATTCCAGCTTaGGTCTCTTGGTTGGAAGTT +
Preference number: 4 (lower is better)
Translates to: QCALCHILYNKSEHGTADRPIPA*VSWLEV
Trigger: AACTTCCAACCAAGAGACTCAAGCTGGAATGGGTCT...ATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATGACACAGTGCACATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR TCA 90 bp AAGTCAGTTAGGAGTAGAGTCTGCTTAGCACAAGAGGGATACAAGCCCTCTCTCAAAAACCTATTCCAATaGCGTGGAGAGTATTCAATG +
Preference number: 4 (lower is better)
Translates to: KSVRSRVCLAQEGYKPSLKNLFQ*RGEYSM
Trigger: CATTGAATACTCTCCACGTCATTGGAATAGGTTTTT...GAGAGAGGGCTTGTATCCCTCTTGTGCTAAGCAGACTCTACTCCTAACTGACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR TCA 90 bp CTGTGTCATATATTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGTCCTCCATTAGATTTTaGGAATGCAATACAGGTGAC +
Preference number: 4 (lower is better)
Translates to: LCHILYNKSEHGTADPLWSSIRF*ECNTGD
Trigger: GTCACCTGTATTGCATTCTCAAAATCTAATGGAGGA...CCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATGACACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR TCA 90 bp GGCTATAATGTAAACGTTGCAACCTTGTTGGTATTCAATGTGCACTGTGTCATATTCCGCTCCAAGAAATaGGCTTTCGGTCTTTCCCAC +
Preference number: 4 (lower is better)
Translates to: GYNVNVATLLVFNVHCVIFRSKK*AFGLSH
Trigger: GTGGGAAAGACCGAAAGCTCATTTCTTGGAGCGGAA...TATGACACAGTGCACATTGAATACCAACAAGGTTGCAACGTTTACATTATAGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR TCA 90 bp AATATCATCTCATGCCAAGTAATATACACAAGAAGGTGGCAAAATGTCTCACCGTTCCGCTCCAAGAAATaGGCTTTCGGTCTTTCCCAC +
Preference number: 4 (lower is better)
Translates to: NIISCQVIYTRRWQNVSPFRSKK*AFGLSH
Trigger: GTGGGAAAGACCGAAAGCTCATTTCTTGGAGCGGAA...CGGTGAGACATTTTGCCACCTTCTTGTGTATATTACTTGGCATGAGATGATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR TCA 90 bp AATTTCTGCCACCTCCGTTTAACGCATCAGAACTCAATCTTATCTCATACTGTACAAGAACTGAGATTTTaGGGCATGGATGGCCAGTCC +
Preference number: 4 (lower is better)
Translates to: NFCHLRLTHQNSILSHTVQELRF*GMDGQS
Trigger: GGACTGGCCATCCATGCCTCAAAATCTCAGTTCTTG...TACAGTATGAGATAAGATTGAGTTCTGATGCGTTAAACGGAGGTGGCAGAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR TCA 90 bp TTGAGTATGGTAATTAGGCCAAATCCTTTATGGTTATCTCCCCTGATGAATGCTCAAGAACTGAGATTTTaGGGCATGGATGGCCAGTCC +
Preference number: 4 (lower is better)
Translates to: LSMVIRPNPLWLSPLMNAQELRF*GMDGQS
Trigger: GGACTGGCCATCCATGCCTCAAAATCTCAGTTCTTG...AGCATTCATCAGGGGAGATAACCATAAAGGATTTGGCCTAATTACCATACTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262233.11
ENST00000649352.1
CDS-3UTR TCA 90 bp TTAAACAAAACAGAAATCACAGTGACCAAGGGTAATGCGAGTCTGTGTCTTCCTCCACAGGTCAAGAACTaGGATTTTGAGGCATGGATG +
Preference number: 4 (lower is better)
Translates to: LNKTEITVTKGNASLCLPPQVKN*DFEAWM
Trigger: CATCCATGCCTCAAAATCTCAGTTCTTGACCTGTGG...AGGAAGACACAGACTCGCATTACCCTTGGTCACTGTGATTTCTGTTTTGTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR TCA 90 bp CAAGGATACATACAAACAGATTCATCTTCAATAATACATGGTGTTTACTGGTGCCAAACCACCTCCCAGTaGGTGTTCCGACTGCAACCA +
Preference number: 4 (lower is better)
Translates to: QGYIQTDSSSIIHGVYWCQTTSQ*VFRLQP
Trigger: TGGTTGCAGTCGGAACACTCACTGGGAGGTGGTTTG...GCACCAGTAAACACCATGTATTATTGAAGATGAATCTGTTTGTATGTATCCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR TCA 90 bp ATGGTAATTAGGCCAAATCCTTTATGGTTATCTCCCCTGATGAATGCTTCCACGCATCTGTGTGAACGGTaGCCAAGTCTTTTGTTTCTG +
Preference number: 4 (lower is better)
Translates to: MVIRPNPLWLSPLMNASTHLCER*PSLLFL
Trigger: CAGAAACAAAAGACTTGGTCACCGTTCACACAGATG...CGTGGAAGCATTCATCAGGGGAGATAACCATAAAGGATTTGGCCTAATTACCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262233.11
ENST00000649352.1
CDS-3UTR TCA 90 bp TTAAACAAAACAGAAATCACAGTGACCAAGGGTAATGCGAGTCTGTGTCTTCCTAAAGTCGTCGCCTGTTaGCAGGAGTTTCTTCTCATG +
Preference number: 4 (lower is better)
Translates to: LNKTEITVTKGNASLCLPKVVAC*QEFLLM
Trigger: CATGAGAAGAAACTCCTGTCAACAGGCGACGACTTT...AGGAAGACACAGACTCGCATTACCCTTGGTCACTGTGATTTCTGTTTTGTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR TCA 90 bp CTGCCACCTCCGTTTAACGCATCAGAACTCAATCTTATCTCATACTGTAATGGGACCCTGCTGAAATATTaGAGTCAGTTAGGAGTAGAG +
Preference number: 4 (lower is better)
Translates to: LPPPFNASELNLISYCNGTLLKY*SQLGVE
Trigger: CTCTACTCCTAACTGACTTCAATATTTCAGCAGGGT...CCCATTACAGTATGAGATAAGATTGAGTTCTGATGCGTTAAACGGAGGTGGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR TCA 90 bp AGCCTCCCCAAGGGAGAATGCAATGAAACTTTGGAAAATGTAACCAAACACAGTCGAGAGAGATCTTTCTaGCTTGGTCTACTTGGTCAT +
Preference number: 4 (lower is better)
Translates to: SLPKGECNETLENVTKHSRERSF*LGLLGH
Trigger: ATGACCAAGTAGACCAAGTCAGAAAGATCTCTCTCG...ACTGTGTTTGGTTACATTTTCCAAAGTTTCATTGCATTCTCCCTTGGGGAGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR TCA 90 bp AACTTGGAAACGCCTGTGTACCCTGCTGAAATATTGAAGTCAGTTAGGAGTAGACGAGAGAGATCTTTCTaGCTTGGTCTACTTGGTCAT +
Preference number: 4 (lower is better)
Translates to: NLETPVYPAEILKSVRSRRERSF*LGLLGH
Trigger: ATGACCAAGTAGACCAAGTCAGAAAGATCTCTCTCG...TCTACTCCTAACTGACTTCAATATTTCAGCAGGGTACACAGGCGTTTCCAAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR TCA 90 bp GACAAATTTCTGCCACCTCCGTTTAACGCATCAGAACTCAATCTTATCTCATACAAGAGCTGGTCCTCTTaGTGTTACTTGGTGTCGATC +
Preference number: 4 (lower is better)
Translates to: DKFLPPPFNASELNLISYKSWSS*CYLVSI
Trigger: GATCGACACCAAGTAACATCAAGAGGACCAGCTCTT...GTATGAGATAAGATTGAGTTCTGATGCGTTAAACGGAGGTGGCAGAAATTTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp CAAGGATACATACAAACAGATTCATCTTCAATAATACATGGTGTTTACTGGTGCGCTCCAGTGAAGCAATaGGGTCTGTCACCTCCATGC +
Preference number: 4 (lower is better)
Translates to: QGYIQTDSSSIIHGVYWCAPVKQ*GLSPPC
Trigger: GCATGGAGGTGACAGACCGCATTGCTTCACTGGAGC...GCACCAGTAAACACCATGTATTATTGAAGATGAATCTGTTTGTATGTATCCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp TTAAACAAAACAGAAATCACAGTGACCAAGGGTAATGCGAGTCTGTGTCTTCCTCTGTTAAGCACGGCCTaGTGTTCCTCAGTAATGTTC +
Preference number: 4 (lower is better)
Translates to: LNKTEITVTKGNASLCLPLLSTA*CSSVMF
Trigger: GAACATTACTGAGGAACAGCAGGCCGTGCTTAACAG...AGGAAGACACAGACTCGCATTACCCTTGGTCACTGTGATTTCTGTTTTGTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp AGCCTCCCCAAGGGAGAATGCAATGAAACTTTGGAAAATGTAACCAAACACAGTCAGGCTCCTTGGGTTTaGTTTCACTGTTCTTTTTGC +
Preference number: 4 (lower is better)
Translates to: SLPKGECNETLENVTKHSQAPWV*FHCSFC
Trigger: GCAAAAAGAACAGTGAAAGCAAACCCAAGGAGCCTG...ACTGTGTTTGGTTACATTTTCCAAAGTTTCATTGCATTCTCCCTTGGGGAGGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp AATATCATCTCATGCCAAGTAATATACACAAGAAGGTGGCAAAATGTCTCACCGTTCCATCCTTCGATGTaGCCGCAACTTGTCCTGTTG +
Preference number: 4 (lower is better)
Translates to: NIISCQVIYTRRWQNVSPFHPSM*PQLVLL
Trigger: CAACAGGACAAGTTGCGGGCACATCGAAGGATGGAA...CGGTGAGACATTTTGCCACCTTCTTGTGTATATTACTTGGCATGAGATGATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp TCAGAACTCAATCTTATCTCATACTGTAATGGGTCGCCCATGCACAAAAGACAGATGGGCCCCCTGAACTaGATAGCTTATTCGATTTGT +
Preference number: 4 (lower is better)
Translates to: SELNLISYCNGSPMHKRQMGPLN*IAYSIC
Trigger: ACAAATCGAATAAGCTATGCAGTTCAGGGGGCCCAT...CTGTCTTTTGTGCATGGGCGACCCATTACAGTATGAGATAAGATTGAGTTCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp AACTTGGAAACGCCTGTGTACCCTGCTGAAATATTGAAGTCAGTTAGGAGTAGACTCCCGACACCAGTGTaGCATCTCTTAACATACAAA +
Preference number: 4 (lower is better)
Translates to: NLETPVYPAEILKSVRSRLPTPV*HLLTYK
Trigger: TTTGTATGTTAAGAGATGGCACACTGGTGTCGGGAG...TCTACTCCTAACTGACTTCAATATTTCAGCAGGGTACACAGGCGTTTCCAAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp CTGCCACCTCCGTTTAACGCATCAGAACTCAATCTTATCTCATACTGTAATGGGCAAAGTTTCGAGTTGTaGCAATCAAGATCACATCGC +
Preference number: 4 (lower is better)
Translates to: LPPPFNASELNLISYCNGQSFEL*QSRSHR
Trigger: GCGATGTGATCTTGATTGGCACAACTCGAAACTTTG...CCCATTACAGTATGAGATAAGATTGAGTTCTGATGCGTTAAACGGAGGTGGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp AATTTCTGCCACCTCCGTTTAACGCATCAGAACTCAATCTTATCTCATACTGTACCTGACAGAGTGCCCTaGAGGACAAAGTTTCGAGTT +
Preference number: 4 (lower is better)
Translates to: NFCHLRLTHQNSILSHTVPDRVP*RTKFRV
Trigger: AACTCGAAACTTTGTCCTGCAGGGCACTCTGTCAGG...TACAGTATGAGATAAGATTGAGTTCTGATGCGTTAAACGGAGGTGGCAGAAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp ATGCAGTTGTCATGTGAGCCTATGGCTAAGAAATTCCCATCTGGTGAGTATCGCCGCCATATATATAGATaGAGTTGTCATGTGAGCCTA +
Preference number: 4 (lower is better)
Translates to: MQLSCEPMAKKFPSGEYRRHIYR*SCHVSL
Trigger: TAGGCTCACATGACAACTGCATCTATATATATGGCG...GCGATACTCACCAGATGGGAATTTCTTAGCCATAGGCTCACATGACAACTGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557313.5
CDS-3UTR GCA 90 bp AATTTCTGCCACCTCCGTTTAACGCATCAGAACTCAATCTTATCTCATACTGTATCCACACTTACGACTTaGTTACAGGCAGAGGGAACC +
Preference number: 4 (lower is better)
Translates to: NFCHLRLTHQNSILSHTVSTLTT*LQAEGT
Trigger: GGTTCCCTCTGCCTGTAAGCAAGTCGTAAGTGTGGA...TACAGTATGAGATAAGATTGAGTTCTGATGCGTTAAACGGAGGTGGCAGAAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp ATGGTAATTAGGCCAAATCCTTTATGGTTATCTCCCCTGATGAATGCTTCCACGGTTAGGAGTAGAGTCTaGTTAGCACAAGAGGGATAC +
Preference number: 4 (lower is better)
Translates to: MVIRPNPLWLSPLMNASTVRSRV*LAQEGY
Trigger: GTATCCCTCTTGTGCTAAGCAGACTCTACTCCTAAC...CGTGGAAGCATTCATCAGGGGAGATAACCATAAAGGATTTGGCCTAATTACCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262233.11
ENST00000649352.1
CDS-3UTR GCA 90 bp TTAAACAAAACAGAAATCACAGTGACCAAGGGTAATGCGAGTCTGTGTCTTCCTGTAATGGGTCGCCCATaGACAAAAGACAGGAAAAGC +
Preference number: 4 (lower is better)
Translates to: LNKTEITVTKGNASLCLPVMGRP*TKDRKS
Trigger: GCTTTTCCTGTCTTTTGTGCATGGGCGACCCATTAC...AGGAAGACACAGACTCGCATTACCCTTGGTCACTGTGATTTCTGTTTTGTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp AAGTCAGTTAGGAGTAGAGTCTGCTTAGCACAAGAGGGATACAAGCCCTCTCTCACTCTAAACAACCAGTaGCATAGAGCTCAGATAATT +
Preference number: 4 (lower is better)
Translates to: KSVRSRVCLAQEGYKPSLTLNNQ*HRAQII
Trigger: AATTATCTGAGCTCTATGGCACTGGTTGTTTAGAGT...GAGAGAGGGCTTGTATCCCTCTTGTGCTAAGCAGACTCTACTCCTAACTGACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp CAATGTGCACTGTGTCATATATTGTACAACAAAAGTGAACACGGAACCGCTGATTCCCTTCACTTACTGTaGTCCAACCAGAGAACACAG +
Preference number: 4 (lower is better)
Translates to: QCALCHILYNKSEHGTADSLHLL*SNQRTQ
Trigger: CTGTGTTCTCTGGTTGGAGCACAGTAAGTGAAGGGA...ATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATGACACAGTGCACATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649352.1
CDS-3UTR CCA 90 bp TTAAACAAAACAGAAATCACAGTGACCAAGGGTAATGCGAGTCTGTGTCTTCCTGCTGATTTGAGCAGCTaGATGTCGTCTTCTTGCATC +
Preference number: 4 (lower is better)
Translates to: LNKTEITVTKGNASLCLPADLSS*MSSSCI
Trigger: GATGCAAGAAGACGACATCCAGCTGCTCAAATCAGC...AGGAAGACACAGACTCGCATTACCCTTGGTCACTGTGATTTCTGTTTTGTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CCA 90 bp CAATGTGCACTGTGTCATATATTGTACAACAAAAGTGAACACGGAACCGCTGATGCTGATTTGAGCAGCTaGATGTCGTCTTCTTGCATC +
Preference number: 4 (lower is better)
Translates to: QCALCHILYNKSEHGTADADLSS*MSSSCI
Trigger: GATGCAAGAAGACGACATCCAGCTGCTCAAATCAGC...ATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATGACACAGTGCACATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CCA 90 bp CTGCTTCATAGACATTTCCAACCAATACTTCCCAGCTTAACATGGTGGAAGGAGGTTACTTTTGGTTGCTaGCACAGCAGTTTCTTTCCT +
Preference number: 4 (lower is better)
Translates to: LLHRHFQPILPSLTWWKEVTFGC*HSSFFP
Trigger: AGGAAAGAAACTGCTGTGCCAGCAACCAAAAGTAAC...CTCCTTCCACCATGTTAAGCTGGGAAGTATTGGTTGGAAATGTCTATGAAGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557741.1
CDS-3UTR CCA 90 bp CTGTGTCATATATTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGCTTGAGTCTCTTGGTTaGAAGTTCTACTTTTGCTTC +
Preference number: 4 (lower is better)
Translates to: LCHILYNKSEHGTADPLWLESLG*KFYFCF
Trigger: GAAGCAAAAGTAGAACTTCCAACCAAGAGACTCAAG...CCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATGACACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CCA 90 bp GGCTATAATGTAAACGTTGCAACCTTGTTGGTATTCAATGTGCACTGTGTCATACCAGATGCGCACATGTaGGGGCAATTGTTTTCCATC +
Preference number: 4 (lower is better)
Translates to: GYNVNVATLLVFNVHCVIPDAHM*GQLFSI
Trigger: GATGGAAAACAATTGCCCCCACATGTGCGCATCTGG...TATGACACAGTGCACATTGAATACCAACAAGGTTGCAACGTTTACATTATAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CCA 90 bp AATTTCTGCCACCTCCGTTTAACGCATCAGAACTCAATCTTATCTCATACTGTACCAGATGCGCACATGTaGGGGCAATTGTTTTCCATC +
Preference number: 4 (lower is better)
Translates to: NFCHLRLTHQNSILSHTVPDAHM*GQLFSI
Trigger: GATGGAAAACAATTGCCCCCACATGTGCGCATCTGG...TACAGTATGAGATAAGATTGAGTTCTGATGCGTTAAACGGAGGTGGCAGAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CCA 90 bp TTTCCACAAGTAACTATGATGTTGGTGTCCGTGGGGTGGAAATCCGCAGCAAACACAGAGGACAAACTTTaGCTTTTCTTGTTTCTCGAA +
Preference number: 4 (lower is better)
Translates to: FPQVTMMLVSVGWKSAANTEDKL*LFLFLE
Trigger: TTCGAGAAACAAGAAAAGCCAAAGTTTGTCCTCTGT...GTTTGCTGCGGATTTCCACCCCACGGACACCAACATCATAGTTACTTGTGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554553.5
CDS-3UTR CCA 90 bp AAGTCAGTTAGGAGTAGAGTCTGCTTAGCACAAGAGGGATACAAGCCCTCTCTCCCTCTTGATGTTACTTaGTGTCGATCTATTCAGTTT +
Preference number: 4 (lower is better)
Translates to: KSVRSRVCLAQEGYKPSLPLDVT*CRSIQF
Trigger: AAACTGAATAGATCGACACCAAGTAACATCAAGAGG...GAGAGAGGGCTTGTATCCCTCTTGTGCTAAGCAGACTCTACTCCTAACTGACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CCA 90 bp AACGTTGCAACCTTGTTGGTATTCAATGTGCACTGTGTCATATATTGTACAACAGACTTAGCACGGGACTaGCAAGTCAGCTCGAACCTT +
Preference number: 4 (lower is better)
Translates to: NVATLLVFNVHCVIYCTTDLARD*QVSSNL
Trigger: AAGGTTCGAGCTGACTTGCCAGTCCCGTGCTAAGTC...TGTTGTACAATATATGACACAGTGCACATTGAATACCAACAAGGTTGCAACGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649352.1
CDS-3UTR CCA 90 bp AGACATTTCCAACCAATACTTCCCAGCTTAACATGGTGGAAGGAGCACAGATTTCTTCCCAGCTTAACATaGTGGAAGGAGCACAGATTT +
Preference number: 4 (lower is better)
Translates to: RHFQPILPSLTWWKEHRFLPSLT*WKEHRF
Trigger: AAATCTGTGCTCCTTCCACCATGTTAAGCTGGGAAG...AAATCTGTGCTCCTTCCACCATGTTAAGCTGGGAAGTATTGGTTGGAAATGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557741.1
3UTR CAA 72 bp TCTCACAGCCTCCCCAAGGGAGAATGCAATGAAACTTaGGAAAATGTAACCAAACACAGTCTCATCTTTGTG +
Preference number: 4 (lower is better)
Translates to: SHSLPKGECNET*ENVTKHSLIFV
Trigger: CACAAAGATGAGACTGTGTTTGGTTACATTTTCCAAAGTTTCATTGCATTCTCCCTTGGGGAGGCTGTGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR TCA 90 bp AATATCATCTCATGCCAAGTAATATACACAAGAAGGTGGCAAAATGTCTCACCGACACAGTGCCATTGTTaGCCGTGGTTCTTAAAGGCA +
Preference number: 4 (lower is better)
Translates to: NIISCQVIYTRRWQNVSPTQCHC*PWFLKA
Trigger: TGCCTTTAAGAACCACGGTCAACAATGGCACTGTGT...CGGTGAGACATTTTGCCACCTTCTTGTGTATATTACTTGGCATGAGATGATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR TCA 90 bp TTGAGTATGGTAATTAGGCCAAATCCTTTATGGTTATCTCCCCTGATGAATGCTAGACCCATTCCAGCTTaGGTCTCTTGGTTGGAAGTT +
Preference number: 4 (lower is better)
Translates to: LSMVIRPNPLWLSPLMNARPIPA*VSWLEV
Trigger: AACTTCCAACCAAGAGACTCAAGCTGGAATGGGTCT...AGCATTCATCAGGGGAGATAACCATAAAGGATTTGGCCTAATTACCATACTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262233.11
ENST00000649352.1
CDS-3UTR TCA 90 bp AACGTTGCAACCTTGTTGGTATTCAATGTGCACTGTGTCATATATTGTACAACACAAGAACTGAGATTTTaGGGCATGGATGGCCAGTCC +
Preference number: 4 (lower is better)
Translates to: NVATLLVFNVHCVIYCTTQELRF*GMDGQS
Trigger: GGACTGGCCATCCATGCCTCAAAATCTCAGTTCTTG...TGTTGTACAATATATGACACAGTGCACATTGAATACCAACAAGGTTGCAACGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR TCA 90 bp TTAAACAAAACAGAAATCACAGTGACCAAGGGTAATGCGAGTCTGTGTCTTCCTCATCTGTGTGAACGGTaGCCAAGTCTTTTGTTTCTG +
Preference number: 4 (lower is better)
Translates to: LNKTEITVTKGNASLCLPHLCER*PSLLFL
Trigger: CAGAAACAAAAGACTTGGTCACCGTTCACACAGATG...AGGAAGACACAGACTCGCATTACCCTTGGTCACTGTGATTTCTGTTTTGTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR TCA 90 bp GACAAATTTCTGCCACCTCCGTTTAACGCATCAGAACTCAATCTTATCTCATACTCGTTTCCATCTGTGTaGACGGTGACCAAGTCTTTT +
Preference number: 4 (lower is better)
Translates to: DKFLPPPFNASELNLISYSFPSV*TVTKSF
Trigger: AAAAGACTTGGTCACCGTTCACACAGATGGAAACGA...GTATGAGATAAGATTGAGTTCTGATGCGTTAAACGGAGGTGGCAGAAATTTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR TCA 90 bp GGCTATAATGTAAACGTTGCAACCTTGTTGGTATTCAATGTGCACTGTGTCATAAAAGTCGTCGCCTGTTaGCAGGAGTTTCTTCTCATG +
Preference number: 4 (lower is better)
Translates to: GYNVNVATLLVFNVHCVIKVVAC*QEFLLM
Trigger: CATGAGAAGAAACTCCTGTCAACAGGCGACGACTTT...TATGACACAGTGCACATTGAATACCAACAAGGTTGCAACGTTTACATTATAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR TCA 90 bp CTGTGTCATATATTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGACCAGTTACTTCTGTTaGTGTGGCTATAATGTAAAC +
Preference number: 4 (lower is better)
Translates to: LCHILYNKSEHGTADPLWTSYFC*CGYNVN
Trigger: GTTTACATTATAGCCACATCAACAGAAGTAACTGGT...CCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATGACACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR TCA 90 bp TCAGAACTCAATCTTATCTCATACTGTAATGGGTCGCCCATGCACAAAAGACAGACCCTGCTGAAATATTaGAGTCAGTTAGGAGTAGAG +
Preference number: 4 (lower is better)
Translates to: SELNLISYCNGSPMHKRQTLLKY*SQLGVE
Trigger: CTCTACTCCTAACTGACTTCAATATTTCAGCAGGGT...CTGTCTTTTGTGCATGGGCGACCCATTACAGTATGAGATAAGATTGAGTTCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR TCA 90 bp AGCCTCCCCAAGGGAGAATGCAATGAAACTTTGGAAAATGTAACCAAACACAGTTCCTTTGTCCATTATTaGGCTTGGCAAACAGGAGTA +
Preference number: 4 (lower is better)
Translates to: SLPKGECNETLENVTKHSSFVHY*AWQTGV
Trigger: TACTCCTGTTTGCCAAGCTCAATAATGGACAAAGGA...ACTGTGTTTGGTTACATTTTCCAAAGTTTCATTGCATTCTCCCTTGGGGAGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262233.11
ENST00000649352.1
CDS-3UTR GCA 90 bp AATTTCTGCCACCTCCGTTTAACGCATCAGAACTCAATCTTATCTCATACTGTACTGTTAAGCACGGCCTaGTGTTCCTCAGTAATGTTC +
Preference number: 4 (lower is better)
Translates to: NFCHLRLTHQNSILSHTVLLSTA*CSSVMF
Trigger: GAACATTACTGAGGAACAGCAGGCCGTGCTTAACAG...TACAGTATGAGATAAGATTGAGTTCTGATGCGTTAAACGGAGGTGGCAGAAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp AAGCGACTGCTTCATAGACATTTCCAACCAATACTTCCCAGCTTAACATGGTGGGATGTTACTTTTGGTTaGTGGCACAGCAGTTTCTTT +
Preference number: 4 (lower is better)
Translates to: KRLLHRHFQPILPSLTWWDVTFG*WHSSFF
Trigger: AAAGAAACTGCTGTGCCAGCAACCAAAAGTAACATC...CCACCATGTTAAGCTGGGAAGTATTGGTTGGAAATGTCTATGAAGCAGTCGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557741.1
CDS-3UTR GCA 90 bp CTGTGTCATATATTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGTGGAAGTTCTACTTTTaGTTCCAAGCTGTAAGAATC +
Preference number: 4 (lower is better)
Translates to: LCHILYNKSEHGTADPLWWKFYF*FQAVRI
Trigger: GATTCTTACAGCTTGGAAGCAAAAGTAGAACTTCCA...CCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATGACACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp TCTCCAGTAATGGTGTCACCGTTTTCAGAGAAAGTCACACAGAGGACAAACTTTAGTTTTTCTTCTTTCTaGCAGTCCCATACAGAGAGC +
Preference number: 4 (lower is better)
Translates to: SPVMVSPFSEKVTQRTNFSFSSF*QSHTES
Trigger: GCTCTCTGTATGGGACTGGCAGAAAGAAGAAAAACT...AAAGTTTGTCCTCTGTGTGACTTTCTCTGAAAACGGTGACACCATTACTGGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554553.5
CDS-3UTR GCA 90 bp AAGTCAGTTAGGAGTAGAGTCTGCTTAGCACAAGAGGGATACAAGCCCTCTCTCTTCTCGAATAATCCTTaGTTCTTATTAAGGGAGCTT +
Preference number: 4 (lower is better)
Translates to: KSVRSRVCLAQEGYKPSLFSNNP*FLLREL
Trigger: AAGCTCCCTTAATAAGAAGCAAGGATTATTCGAGAA...GAGAGAGGGCTTGTATCCCTCTTGTGCTAAGCAGACTCTACTCCTAACTGACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp AACGTTGCAACCTTGTTGGTATTCAATGTGCACTGTGTCATATATTGTACAACAAGAAGAGGTGCACTTTaGCAAAGTCGTCGCCTGTTG +
Preference number: 4 (lower is better)
Translates to: NVATLLVFNVHCVIYCTTRRGAL*QSRRLL
Trigger: CAACAGGCGACGACTTTGGCAAAGTGCACCTCTTCT...TGTTGTACAATATATGACACAGTGCACATTGAATACCAACAAGGTTGCAACGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CCA 90 bp TTGAGTATGGTAATTAGGCCAAATCCTTTATGGTTATCTCCCCTGATGAATGCTGCTGATTTGAGCAGCTaGATGTCGTCTTCTTGCATC +
Preference number: 4 (lower is better)
Translates to: LSMVIRPNPLWLSPLMNAADLSS*MSSSCI
Trigger: GATGCAAGAAGACGACATCCAGCTGCTCAAATCAGC...AGCATTCATCAGGGGAGATAACCATAAAGGATTTGGCCTAATTACCATACTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262233.11
ENST00000649352.1
CDS-3UTR CCA 90 bp AACGTTGCAACCTTGTTGGTATTCAATGTGCACTGTGTCATATATTGTACAACAAGAGCACATGGTCGTTaGAGTCATCCACAGCACAGA +
Preference number: 4 (lower is better)
Translates to: NVATLLVFNVHCVIYCTTRAHGR*SHPQHR
Trigger: TCTGTGCTGTGGATGACTCCAACGACCATGTGCTCT...TGTTGTACAATATATGACACAGTGCACATTGAATACCAACAAGGTTGCAACGTT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CCA 90 bp CAAGGATACATACAAACAGATTCATCTTCAATAATACATGGTGTTTACTGGTGCTTGGTGTCCGTGGGGTaGAAATCCGCAGCAAACACA +
Preference number: 4 (lower is better)
Translates to: QGYIQTDSSSIIHGVYWCLVSVG*KSAANT
Trigger: TGTGTTTGCTGCGGATTTCCACCCCACGGACACCAA...GCACCAGTAAACACCATGTATTATTGAAGATGAATCTGTTTGTATGTATCCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CCA 90 bp AACTTGGAAACGCCTGTGTACCCTGCTGAAATATTGAAGTCAGTTAGGAGTAGATGGACCAAACTGTTCTaGAATCTCCGTTTTACGAAG +
Preference number: 4 (lower is better)
Translates to: NLETPVYPAEILKSVRSRWTKLF*NLRFTK
Trigger: CTTCGTAAAACGGAGATTCCAGAACAGTTTGGTCCA...TCTACTCCTAACTGACTTCAATATTTCAGCAGGGTACACAGGCGTTTCCAAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CCA 90 bp ATGGAATCCCAAAGTGCAGGTATAGGTAGCCCATTCAATGTCTCTTGTAGTTTCTGTCATGTGAGCCTATaGCTAAGAAATTCCCATCTG +
Preference number: 4 (lower is better)
Translates to: MESQSAGIGSPFNVSCSFCHVSL*LRNSHL
Trigger: CAGATGGGAATTTCTTAGCCATAGGCTCACATGACA...GAAACTACAAGAGACATTGAATGGGCTACCTATACCTGCACTTTGGGATTCCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557313.5
CDS-3UTR CCA 90 bp TCAGAACTCAATCTTATCTCATACTGTAATGGGTCGCCCATGCACAAAAGACAGTGTCATGTGAGCCTATaGCTAAGAAATTCCCATCTG +
Preference number: 4 (lower is better)
Translates to: SELNLISYCNGSPMHKRQCHVSL*LRNSHL
Trigger: CAGATGGGAATTTCTTAGCCATAGGCTCACATGACA...CTGTCTTTTGTGCATGGGCGACCCATTACAGTATGAGATAAGATTGAGTTCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CCA 90 bp CAATTCCTCAACAGCCATCGTGGTTCAGTACCTCATTATCATCATAAATATTTGGGTGTCACTGAAACTTaGAAACGCCTGTGTACCCTG +
Preference number: 4 (lower is better)
Translates to: QFLNSHRGSVPHYHHKYLGVTET*KRLCTL
Trigger: CAGGGTACACAGGCGTTTCCAAGTTTCAGTGACACC...CAAATATTTATGATGATAATGAGGTACTGAACCACGATGGCTGTTGAGGAATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CCA 90 bp CTGTGTCATATATTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGCCTCTTGATGTTACTTaGTGTCGATCTATTCAGTTT +
Preference number: 4 (lower is better)
Translates to: LCHILYNKSEHGTADPLWPLDVT*CRSIQF
Trigger: AAACTGAATAGATCGACACCAAGTAACATCAAGAGG...CCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATGACACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR TCA 90 bp AACGTTGCAACCTTGTTGGTATTCAATGTGCACTGTGTCATATATTGTACAACAAGACCCATTCCAGCTTaGGTCTCTTGGTTGGAAGTT +
Preference number: 4 (lower is better)
Translates to: NVATLLVFNVHCVIYCTTRPIPA*VSWLEV
Trigger: AACTTCCAACCAAGAGACTCAAGCTGGAATGGGTCT...TGTTGTACAATATATGACACAGTGCACATTGAATACCAACAAGGTTGCAACGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR TCA 90 bp AATATCATCTCATGCCAAGTAATATACACAAGAAGGTGGCAAAATGTCTCACCGCATCTGTGTGAACGGTaGCCAAGTCTTTTGTTTCTG +
Preference number: 4 (lower is better)
Translates to: NIISCQVIYTRRWQNVSPHLCER*PSLLFL
Trigger: CAGAAACAAAAGACTTGGTCACCGTTCACACAGATG...CGGTGAGACATTTTGCCACCTTCTTGTGTATATTACTTGGCATGAGATGATATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR TCA 90 bp CTGCCACCTCCGTTTAACGCATCAGAACTCAATCTTATCTCATACTGTAATGGGACCAGTTACTTCTGTTaGTGTGGCTATAATGTAAAC +
Preference number: 4 (lower is better)
Translates to: LPPPFNASELNLISYCNGTSYFC*CGYNVN
Trigger: GTTTACATTATAGCCACATCAACAGAAGTAACTGGT...CCCATTACAGTATGAGATAAGATTGAGTTCTGATGCGTTAAACGGAGGTGGCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR TCA 90 bp CAATGTGCACTGTGTCATATATTGTACAACAAAAGTGAACACGGAACCGCTGATTTCACTCTTCTGAAGTaGTCTGTCCTTTTAGGACCA +
Preference number: 4 (lower is better)
Translates to: QCALCHILYNKSEHGTADFTLLK*SVLLGP
Trigger: TGGTCCTAAAAGGACAGATCACTTCAGAAGAGTGAA...ATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATGACACAGTGCACATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR TCA 90 bp GACAAATTTCTGCCACCTCCGTTTAACGCATCAGAACTCAATCTTATCTCATACACCCTGCTGAAATATTaGAGTCAGTTAGGAGTAGAG +
Preference number: 4 (lower is better)
Translates to: DKFLPPPFNASELNLISYTLLKY*SQLGVE
Trigger: CTCTACTCCTAACTGACTTCAATATTTCAGCAGGGT...GTATGAGATAAGATTGAGTTCTGATGCGTTAAACGGAGGTGGCAGAAATTTGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR TCA 90 bp CAATTCCTCAACAGCCATCGTGGTTCAGTACCTCATTATCATCATAAATATTTGCAAAATGTCTCACCGTaGATCAGGGCGTGTGAACAA +
Preference number: 4 (lower is better)
Translates to: QFLNSHRGSVPHYHHKYLQNVSP*IRACEQ
Trigger: TTGTTCACACGCCCTGATTCACGGTGAGACATTTTG...CAAATATTTATGATGATAATGAGGTACTGAACCACGATGGCTGTTGAGGAATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR TCA 90 bp TTGAGTATGGTAATTAGGCCAAATCCTTTATGGTTATCTCCCCTGATGAATGCTCGAGAGAGATCTTTCTaGCTTGGTCTACTTGGTCAT +
Preference number: 4 (lower is better)
Translates to: LSMVIRPNPLWLSPLMNARERSF*LGLLGH
Trigger: ATGACCAAGTAGACCAAGTCAGAAAGATCTCTCTCG...AGCATTCATCAGGGGAGATAACCATAAAGGATTTGGCCTAATTACCATACTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262233.11
ENST00000649352.1
CDS-3UTR GCA 90 bp AACTTGGAAACGCCTGTGTACCCTGCTGAAATATTGAAGTCAGTTAGGAGTAGAGATGTTACTTTTGGTTaGTGGCACAGCAGTTTCTTT +
Preference number: 4 (lower is better)
Translates to: NLETPVYPAEILKSVRSRDVTFG*WHSSFF
Trigger: AAAGAAACTGCTGTGCCAGCAACCAAAAGTAACATC...TCTACTCCTAACTGACTTCAATATTTCAGCAGGGTACACAGGCGTTTCCAAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262233.11
CDS-3UTR GCA 90 bp AATATCATCTCATGCCAAGTAATATACACAAGAAGGTGGCAAAATGTCTCACCGATGGGCCCCCTGAACTaGATAGCTTATTCGATTTGT +
Preference number: 4 (lower is better)
Translates to: NIISCQVIYTRRWQNVSPMGPLN*IAYSIC
Trigger: ACAAATCGAATAAGCTATGCAGTTCAGGGGGCCCAT...CGGTGAGACATTTTGCCACCTTCTTGTGTATATTACTTGGCATGAGATGATATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp AATATCATCTCATGCCAAGTAATATACACAAGAAGGTGGCAAAATGTCTCACCGCTCCCGACACCAGTGTaGCATCTCTTAACATACAAA +
Preference number: 4 (lower is better)
Translates to: NIISCQVIYTRRWQNVSPLPTPV*HLLTYK
Trigger: TTTGTATGTTAAGAGATGGCACACTGGTGTCGGGAG...CGGTGAGACATTTTGCCACCTTCTTGTGTATATTACTTGGCATGAGATGATATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp CAATGTGCACTGTGTCATATATTGTACAACAAAAGTGAACACGGAACCGCTGATCAAAGTTTCGAGTTGTaGCAATCAAGATCACATCGC +
Preference number: 4 (lower is better)
Translates to: QCALCHILYNKSEHGTADQSFEL*QSRSHR
Trigger: GCGATGTGATCTTGATTGGCACAACTCGAAACTTTG...ATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATGACACAGTGCACATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp CAAGGATACATACAAACAGATTCATCTTCAATAATACATGGTGTTTACTGGTGCGGGTATGAGAAGAGGTaGACTTTGCCAAAGTCGTCG +
Preference number: 4 (lower is better)
Translates to: QGYIQTDSSSIIHGVYWCGYEKR*TLPKSS
Trigger: CGACGACTTTGGCAAAGTGCACCTCTTCTCATACCC...GCACCAGTAAACACCATGTATTATTGAAGATGAATCTGTTTGTATGTATCCTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp AGCCTCCCCAAGGGAGAATGCAATGAAACTTTGGAAAATGTAACCAAACACAGTCTCCTGATTCAGCTGTaGAAATCAGTTATTCACTCT +
Preference number: 4 (lower is better)
Translates to: SLPKGECNETLENVTKHSLLIQL*KSVIHS
Trigger: AGAGTGAATAACTGATTTGCACAGCTGAATCAGGAG...ACTGTGTTTGGTTACATTTTCCAAAGTTTCATTGCATTCTCCCTTGGGGAGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp AATATCATCTCATGCCAAGTAATATACACAAGAAGGTGGCAAAATGTCTCACCGGTTAGGAGTAGAGTCTaGTTAGCACAAGAGGGATAC +
Preference number: 4 (lower is better)
Translates to: NIISCQVIYTRRWQNVSPVRSRV*LAQEGY
Trigger: GTATCCCTCTTGTGCTAAGCAGACTCTACTCCTAAC...CGGTGAGACATTTTGCCACCTTCTTGTGTATATTACTTGGCATGAGATGATATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp AGCCTCCCCAAGGGAGAATGCAATGAAACTTTGGAAAATGTAACCAAACACAGTAACTACAGTCTCATCTaGAAACTACAGTCTCATCTG +
Preference number: 4 (lower is better)
Translates to: SLPKGECNETLENVTKHSNYSLI*KLQSHL
Trigger: CAGATGAGACTGTAGTTTGCAGATGAGACTGTAGTT...ACTGTGTTTGGTTACATTTTCCAAAGTTTCATTGCATTCTCCCTTGGGGAGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262233.11
ENST00000649352.1
CDS-3UTR GCA 90 bp AGAAGTTGCTGGAGACTTTATTTGGGACAAAAGCGACTGCTTCATAGACATTTCTGGGACAAAAGCGACTaGTTCATAGACATTTCCAAC +
Preference number: 4 (lower is better)
Translates to: RSCWRLYLGQKRLLHRHFWDKSD*FIDISN
Trigger: GTTGGAAATGTCTATGAAGCAGTCGCTTTTGTCCCA...GAAATGTCTATGAAGCAGTCGCTTTTGTCCCAAATAAAGTCTCCAGCAACTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557741.1
CDS-3UTR CCA 90 bp TTAAACAAAACAGAAATCACAGTGACCAAGGGTAATGCGAGTCTGTGTCTTCCTTGGACCAAACTGTTCTaGAATCTCCGTTTTACGAAG +
Preference number: 4 (lower is better)
Translates to: LNKTEITVTKGNASLCLPWTKLF*NLRFTK
Trigger: CTTCGTAAAACGGAGATTCCAGAACAGTTTGGTCCA...AGGAAGACACAGACTCGCATTACCCTTGGTCACTGTGATTTCTGTTTTGTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CCA 90 bp GACAAATTTCTGCCACCTCCGTTTAACGCATCAGAACTCAATCTTATCTCATACTGTCATGTGAGCCTATaGCTAAGAAATTCCCATCTG +
Preference number: 4 (lower is better)
Translates to: DKFLPPPFNASELNLISYCHVSL*LRNSHL
Trigger: CAGATGGGAATTTCTTAGCCATAGGCTCACATGACA...GTATGAGATAAGATTGAGTTCTGATGCGTTAAACGGAGGTGGCAGAAATTTGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CCA 90 bp TTAAACAAAACAGAAATCACAGTGACCAAGGGTAATGCGAGTCTGTGTCTTCCTCACACTCCAAAAACATaGAATCCCAAAGTGCAGGTA +
Preference number: 4 (lower is better)
Translates to: LNKTEITVTKGNASLCLPHTPKT*NPKVQV
Trigger: TACCTGCACTTTGGGATTCCATGTTTTTGGAGTGTG...AGGAAGACACAGACTCGCATTACCCTTGGTCACTGTGATTTCTGTTTTGTTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CCA 90 bp TTAAACAAAACAGAAATCACAGTGACCAAGGGTAATGCGAGTCTGTGTCTTCCTACGTTGCAACCTTGTTaGTATTCAATGTGCACTGTG +
Preference number: 4 (lower is better)
Translates to: LNKTEITVTKGNASLCLPTLQPC*YSMCTV
Trigger: CACAGTGCACATTGAATACCAACAAGGTTGCAACGT...AGGAAGACACAGACTCGCATTACCCTTGGTCACTGTGATTTCTGTTTTGTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CCA 90 bp CAATTCCTCAACAGCCATCGTGGTTCAGTACCTCATTATCATCATAAATATTTGCTCTCTGCAGGTTTATaGTACGCTCGAGAGAGATCT +
Preference number: 4 (lower is better)
Translates to: QFLNSHRGSVPHYHHKYLLSAGL*YARERS
Trigger: AGATCTCTCTCGAGCGTACCATAAACCTGCAGAGAG...CAAATATTTATGATGATAATGAGGTACTGAACCACGATGGCTGTTGAGGAATTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CCA 90 bp ATGGTAATTAGGCCAAATCCTTTATGGTTATCTCCCCTGATGAATGCTTCCACGAGGCCAAATCCTTTATaGTTATCTCCCCTGATGAAT +
Preference number: 4 (lower is better)
Translates to: MVIRPNPLWLSPLMNASTRPNPL*LSPLMN
Trigger: ATTCATCAGGGGAGATAACCATAAAGGATTTGGCCT...CGTGGAAGCATTCATCAGGGGAGATAACCATAAAGGATTTGGCCTAATTACCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262233.11
ENST00000649352.1
CDS-3UTR TCA 90 bp CAATTCCTCAACAGCCATCGTGGTTCAGTACCTCATTATCATCATAAATATTTGCATCTGTGTGAACGGTaGCCAAGTCTTTTGTTTCTG +
Preference number: 4 (lower is better)
Translates to: QFLNSHRGSVPHYHHKYLHLCER*PSLLFL
Trigger: CAGAAACAAAAGACTTGGTCACCGTTCACACAGATG...CAAATATTTATGATGATAATGAGGTACTGAACCACGATGGCTGTTGAGGAATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR TCA 90 bp AACGTTGCAACCTTGTTGGTATTCAATGTGCACTGTGTCATATATTGTACAACAGAAATTCCCATCTGGTaGGTATCGCATTACAGAGAG +
Preference number: 4 (lower is better)
Translates to: NVATLLVFNVHCVIYCTTEIPIW*VSHYRE
Trigger: CTCTCTGTAATGCGATACTCACCAGATGGGAATTTC...TGTTGTACAATATATGACACAGTGCACATTGAATACCAACAAGGTTGCAACGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR TCA 90 bp CAAGGATACATACAAACAGATTCATCTTCAATAATACATGGTGTTTACTGGTGCAAAGTCGTCGCCTGTTaGCAGGAGTTTCTTCTCATG +
Preference number: 4 (lower is better)
Translates to: QGYIQTDSSSIIHGVYWCKVVAC*QEFLLM
Trigger: CATGAGAAGAAACTCCTGTCAACAGGCGACGACTTT...GCACCAGTAAACACCATGTATTATTGAAGATGAATCTGTTTGTATGTATCCTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR TCA 90 bp ATGGTAATTAGGCCAAATCCTTTATGGTTATCTCCCCTGATGAATGCTTCCACGACCAGTTACTTCTGTTaGTGTGGCTATAATGTAAAC +
Preference number: 4 (lower is better)
Translates to: MVIRPNPLWLSPLMNASTTSYFC*CGYNVN
Trigger: GTTTACATTATAGCCACATCAACAGAAGTAACTGGT...CGTGGAAGCATTCATCAGGGGAGATAACCATAAAGGATTTGGCCTAATTACCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262233.11
ENST00000649352.1
CDS-3UTR TCA 90 bp GGCTATAATGTAAACGTTGCAACCTTGTTGGTATTCAATGTGCACTGTGTCATATTCACTCTTCTGAAGTaGTCTGTCCTTTTAGGACCA +
Preference number: 4 (lower is better)
Translates to: GYNVNVATLLVFNVHCVIFTLLK*SVLLGP
Trigger: TGGTCCTAAAAGGACAGATCACTTCAGAAGAGTGAA...TATGACACAGTGCACATTGAATACCAACAAGGTTGCAACGTTTACATTATAGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR TCA 90 bp AGCCTCCCCAAGGGAGAATGCAATGAAACTTTGGAAAATGTAACCAAACACAGTCAAGGGAGAATGCAATaGAACTTTGGAAAATGTAAC +
Preference number: 4 (lower is better)
Translates to: SLPKGECNETLENVTKHSQGRMQ*NFGKCN
Trigger: GTTACATTTTCCAAAGTTTCATTGCATTCTCCCTTG...ACTGTGTTTGGTTACATTTTCCAAAGTTTCATTGCATTCTCCCTTGGGGAGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR TCA 90 bp TCAGAACTCAATCTTATCTCATACTGTAATGGGTCGCCCATGCACAAAAGACAGCAAGGGAGAATGCAATaGAACTTTGGAAAATGTAAC +
Preference number: 4 (lower is better)
Translates to: SELNLISYCNGSPMHKRQQGRMQ*NFGKCN
Trigger: GTTACATTTTCCAAAGTTTCATTGCATTCTCCCTTG...CTGTCTTTTGTGCATGGGCGACCCATTACAGTATGAGATAAGATTGAGTTCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR TCA 90 bp CAAGGATACATACAAACAGATTCATCTTCAATAATACATGGTGTTTACTGGTGCCAAAATGTCTCACCGTaGATCAGGGCGTGTGAACAA +
Preference number: 4 (lower is better)
Translates to: QGYIQTDSSSIIHGVYWCQNVSP*IRACEQ
Trigger: TTGTTCACACGCCCTGATTCACGGTGAGACATTTTG...GCACCAGTAAACACCATGTATTATTGAAGATGAATCTGTTTGTATGTATCCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR TCA 90 bp CAAGGATACATACAAACAGATTCATCTTCAATAATACATGGTGTTTACTGGTGCTGGATAAGGCCTTCTTaGCAAATTTCTGCCACCTCC +
Preference number: 4 (lower is better)
Translates to: QGYIQTDSSSIIHGVYWCWIRPS*QISATS
Trigger: GGAGGTGGCAGAAATTTGTCAAGAAGGCCTTATCCA...GCACCAGTAAACACCATGTATTATTGAAGATGAATCTGTTTGTATGTATCCTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR TCA 90 bp CAATGTGCACTGTGTCATATATTGTACAACAAAAGTGAACACGGAACCGCTGATTCTGCAGTAGGCTGGTaGTGTCATCAAAAATGTTTT +
Preference number: 4 (lower is better)
Translates to: QCALCHILYNKSEHGTADSAVGW*CHQKCF
Trigger: AAAACATTTTTGATGACATCACCAGCCTACTGCAGA...ATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATGACACAGTGCACATTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp CAATTCCTCAACAGCCATCGTGGTTCAGTACCTCATTATCATCATAAATATTTGCAGGCTCCTTGGGTTTaGTTTCACTGTTCTTTTTGC +
Preference number: 4 (lower is better)
Translates to: QFLNSHRGSVPHYHHKYLQAPWV*FHCSFC
Trigger: GCAAAAAGAACAGTGAAAGCAAACCCAAGGAGCCTG...CAAATATTTATGATGATAATGAGGTACTGAACCACGATGGCTGTTGAGGAATTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp AGCCTCCCCAAGGGAGAATGCAATGAAACTTTGGAAAATGTAACCAAACACAGTTGGAAGTTCTACTTTTaGTTCCAAGCTGTAAGAATC +
Preference number: 4 (lower is better)
Translates to: SLPKGECNETLENVTKHSWKFYF*FQAVRI
Trigger: GATTCTTACAGCTTGGAAGCAAAAGTAGAACTTCCA...ACTGTGTTTGGTTACATTTTCCAAAGTTTCATTGCATTCTCCCTTGGGGAGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp AACTTGGAAACGCCTGTGTACCCTGCTGAAATATTGAAGTCAGTTAGGAGTAGATGGAAGTTCTACTTTTaGTTCCAAGCTGTAAGAATC +
Preference number: 4 (lower is better)
Translates to: NLETPVYPAEILKSVRSRWKFYF*FQAVRI
Trigger: GATTCTTACAGCTTGGAAGCAAAAGTAGAACTTCCA...TCTACTCCTAACTGACTTCAATATTTCAGCAGGGTACACAGGCGTTTCCAAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp GGCTATAATGTAAACGTTGCAACCTTGTTGGTATTCAATGTGCACTGTGTCATACAAAGTTTCGAGTTGTaGCAATCAAGATCACATCGC +
Preference number: 4 (lower is better)
Translates to: GYNVNVATLLVFNVHCVIQSFEL*QSRSHR
Trigger: GCGATGTGATCTTGATTGGCACAACTCGAAACTTTG...TATGACACAGTGCACATTGAATACCAACAAGGTTGCAACGTTTACATTATAGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp GACAAATTTCTGCCACCTCCGTTTAACGCATCAGAACTCAATCTTATCTCATACCGCCATATATATAGATaGAGTTGTCATGTGAGCCTA +
Preference number: 4 (lower is better)
Translates to: DKFLPPPFNASELNLISYRHIYR*SCHVSL
Trigger: TAGGCTCACATGACAACTGCATCTATATATATGGCG...GTATGAGATAAGATTGAGTTCTGATGCGTTAAACGGAGGTGGCAGAAATTTGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp TTAAACAAAACAGAAATCACAGTGACCAAGGGTAATGCGAGTCTGTGTCTTCCTCGCCATATATATAGATaGAGTTGTCATGTGAGCCTA +
Preference number: 4 (lower is better)
Translates to: LNKTEITVTKGNASLCLPRHIYR*SCHVSL
Trigger: TAGGCTCACATGACAACTGCATCTATATATATGGCG...AGGAAGACACAGACTCGCATTACCCTTGGTCACTGTGATTTCTGTTTTGTTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp TTAAACAAAACAGAAATCACAGTGACCAAGGGTAATGCGAGTCTGTGTCTTCCTCTCCTGATTCAGCTGTaGAAATCAGTTATTCACTCT +
Preference number: 4 (lower is better)
Translates to: LNKTEITVTKGNASLCLPLLIQL*KSVIHS
Trigger: AGAGTGAATAACTGATTTGCACAGCTGAATCAGGAG...AGGAAGACACAGACTCGCATTACCCTTGGTCACTGTGATTTCTGTTTTGTTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp CAATGTGCACTGTGTCATATATTGTACAACAAAAGTGAACACGGAACCGCTGATCTCCTGATTCAGCTGTaGAAATCAGTTATTCACTCT +
Preference number: 4 (lower is better)
Translates to: QCALCHILYNKSEHGTADLLIQL*KSVIHS
Trigger: AGAGTGAATAACTGATTTGCACAGCTGAATCAGGAG...ATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATGACACAGTGCACATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp GACAAATTTCTGCCACCTCCGTTTAACGCATCAGAACTCAATCTTATCTCATACAACTACAGTCTCATCTaGAAACTACAGTCTCATCTG +
Preference number: 4 (lower is better)
Translates to: DKFLPPPFNASELNLISYNYSLI*KLQSHL
Trigger: CAGATGAGACTGTAGTTTGCAGATGAGACTGTAGTT...GTATGAGATAAGATTGAGTTCTGATGCGTTAAACGGAGGTGGCAGAAATTTGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262233.11
ENST00000649352.1
CDS-3UTR CCA 90 bp GACAAATTTCTGCCACCTCCGTTTAACGCATCAGAACTCAATCTTATCTCATACCTTGAGTCTCTTGGTTaGAAGTTCTACTTTTGCTTC +
Preference number: 4 (lower is better)
Translates to: DKFLPPPFNASELNLISYLESLG*KFYFCF
Trigger: GAAGCAAAAGTAGAACTTCCAACCAAGAGACTCAAG...GTATGAGATAAGATTGAGTTCTGATGCGTTAAACGGAGGTGGCAGAAATTTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CCA 90 bp AGTCTCATCTGCAAACTACAGTCTCATCTGCAAATGGCCCAGGTGAGAATAAAAACAGAGGACAAACTTTaGCTTTTCTTGTTTCTCGAA +
Preference number: 4 (lower is better)
Translates to: SLICKLQSHLQMAQVRIKTEDKL*LFLFLE
Trigger: TTCGAGAAACAAGAAAAGCCAAAGTTTGTCCTCTGT...TTTTATTCTCACCTGGGCCATTTGCAGATGAGACTGTAGTTTGCAGATGAGACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262233.11
ENST00000649352.1
CDS-3UTR CCA 90 bp AGCCTCCCCAAGGGAGAATGCAATGAAACTTTGGAAAATGTAACCAAACACAGTACAGAGGACAAACTTTaGCTTTTCTTGTTTCTCGAA +
Preference number: 4 (lower is better)
Translates to: SLPKGECNETLENVTKHSTEDKL*LFLFLE
Trigger: TTCGAGAAACAAGAAAAGCCAAAGTTTGTCCTCTGT...ACTGTGTTTGGTTACATTTTCCAAAGTTTCATTGCATTCTCCCTTGGGGAGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CCA 90 bp AATTTCTGCCACCTCCGTTTAACGCATCAGAACTCAATCTTATCTCATACTGTATGTCATGTGAGCCTATaGCTAAGAAATTCCCATCTG +
Preference number: 4 (lower is better)
Translates to: NFCHLRLTHQNSILSHTVCHVSL*LRNSHL
Trigger: CAGATGGGAATTTCTTAGCCATAGGCTCACATGACA...TACAGTATGAGATAAGATTGAGTTCTGATGCGTTAAACGGAGGTGGCAGAAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CCA 90 bp GACAAATTTCTGCCACCTCCGTTTAACGCATCAGAACTCAATCTTATCTCATACATCTTCAATAATACATaGTGTTTACTGGTGCCCTGC +
Preference number: 4 (lower is better)
Translates to: DKFLPPPFNASELNLISYIFNNT*CLLVPC
Trigger: GCAGGGCACCAGTAAACACCATGTATTATTGAAGAT...GTATGAGATAAGATTGAGTTCTGATGCGTTAAACGGAGGTGGCAGAAATTTGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CCA 90 bp TTAAACAAAACAGAAATCACAGTGACCAAGGGTAATGCGAGTCTGTGTCTTCCTAGGCCAAATCCTTTATaGTTATCTCCCCTGATGAAT +
Preference number: 4 (lower is better)
Translates to: LNKTEITVTKGNASLCLPRPNPL*LSPLMN
Trigger: ATTCATCAGGGGAGATAACCATAAAGGATTTGGCCT...AGGAAGACACAGACTCGCATTACCCTTGGTCACTGTGATTTCTGTTTTGTTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262233.11
ENST00000649352.1
CDS-3UTR CCA 90 bp AAGCGACTGCTTCATAGACATTTCCAACCAATACTTCCCAGCTTAACATGGTGGATGTTTAGAAGTTGCTaGAGACTTTATTTGGGACAA +
Preference number: 4 (lower is better)
Translates to: KRLLHRHFQPILPSLTWWMFRSC*RLYLGQ
Trigger: TTGTCCCAAATAAAGTCTCCAGCAACTTCTAAACAT...CCACCATGTTAAGCTGGGAAGTATTGGTTGGAAATGTCTATGAAGCAGTCGCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557741.1
3UTR CAA 72 bp CACCGTTTTCAGAGAAAGTCACACAGAGGACAAACTTaGGCTTTTCTTGTTTCTCGAATAATCCTTGCTTCT +
Preference number: 4 (lower is better)
Translates to: HRFQRKSHRGQT*AFLVSRIILAS
Trigger: AGAAGCAAGGATTATTCGAGAAACAAGAAAAGCCAAAGTTTGTCCTCTGTGTGACTTTCTCTGAAAACGGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554553.5
CDS-3UTR TCA 90 bp CACCGTTTTCAGAGAAAGTCACACAGAGGACAAACTTTGGCTTTTCTTGTTTCTAAAAACCTATTCCAATaGCGTGGAGAGTATTCAATG +
Preference number: 4 (lower is better)
Translates to: HRFQRKSHRGQTLAFLVSKNLFQ*RGEYSM
Trigger: CATTGAATACTCTCCACGTCATTGGAATAGGTTTTT...AGAAACAAGAAAAGCCAAAGTTTGTCCTCTGTGTGACTTTCTCTGAAAACGGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000554553.5
CDS-3UTR TCA 90 bp AATATCATCTCATGCCAAGTAATATACACAAGAAGGTGGCAAAATGTCTCACCGTCCTCCATTAGATTTTaGGAATGCAATACAGGTGAC +
Preference number: 4 (lower is better)
Translates to: NIISCQVIYTRRWQNVSPSSIRF*ECNTGD
Trigger: GTCACCTGTATTGCATTCTCAAAATCTAATGGAGGA...CGGTGAGACATTTTGCCACCTTCTTGTGTATATTACTTGGCATGAGATGATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR TCA 90 bp AATTTCTGCCACCTCCGTTTAACGCATCAGAACTCAATCTTATCTCATACTGTATCTGCAGTAGGCTGGTaGTGTCATCAAAAATGTTTT +
Preference number: 4 (lower is better)
Translates to: NFCHLRLTHQNSILSHTVSAVGW*CHQKCF
Trigger: AAAACATTTTTGATGACATCACCAGCCTACTGCAGA...TACAGTATGAGATAAGATTGAGTTCTGATGCGTTAAACGGAGGTGGCAGAAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp TTAAACAAAACAGAAATCACAGTGACCAAGGGTAATGCGAGTCTGTGTCTTCCTTGGAAGTTCTACTTTTaGTTCCAAGCTGTAAGAATC +
Preference number: 4 (lower is better)
Translates to: LNKTEITVTKGNASLCLPWKFYF*FQAVRI
Trigger: GATTCTTACAGCTTGGAAGCAAAAGTAGAACTTCCA...AGGAAGACACAGACTCGCATTACCCTTGGTCACTGTGATTTCTGTTTTGTTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp CAATTCCTCAACAGCCATCGTGGTTCAGTACCTCATTATCATCATAAATATTTGAGTTTTTCTTCTTTCTaGCAGTCCCATACAGAGAGC +
Preference number: 4 (lower is better)
Translates to: QFLNSHRGSVPHYHHKYLSFSSF*QSHTES
Trigger: GCTCTCTGTATGGGACTGGCAGAAAGAAGAAAAACT...CAAATATTTATGATGATAATGAGGTACTGAACCACGATGGCTGTTGAGGAATTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp TCTCCAGTAATGGTGTCACCGTTTTCAGAGAAAGTCACACAGAGGACAAACTTTTTCTCGAATAATCCTTaGTTCTTATTAAGGGAGCTT +
Preference number: 4 (lower is better)
Translates to: SPVMVSPFSEKVTQRTNFFSNNP*FLLREL
Trigger: AAGCTCCCTTAATAAGAAGCAAGGATTATTCGAGAA...AAAGTTTGTCCTCTGTGTGACTTTCTCTGAAAACGGTGACACCATTACTGGAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554553.5
CDS-3UTR GCA 90 bp CAATGTGCACTGTGTCATATATTGTACAACAAAAGTGAACACGGAACCGCTGATACTCTAAACAACCAGTaGCATAGAGCTCAGATAATT +
Preference number: 4 (lower is better)
Translates to: QCALCHILYNKSEHGTADTLNNQ*HRAQII
Trigger: AATTATCTGAGCTCTATGGCACTGGTTGTTTAGAGT...ATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATGACACAGTGCACATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp GACAAATTTCTGCCACCTCCGTTTAACGCATCAGAACTCAATCTTATCTCATACACTCTAAACAACCAGTaGCATAGAGCTCAGATAATT +
Preference number: 4 (lower is better)
Translates to: DKFLPPPFNASELNLISYTLNNQ*HRAQII
Trigger: AATTATCTGAGCTCTATGGCACTGGTTGTTTAGAGT...GTATGAGATAAGATTGAGTTCTGATGCGTTAAACGGAGGTGGCAGAAATTTGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CCA 90 bp AACGTTGCAACCTTGTTGGTATTCAATGTGCACTGTGTCATATATTGTACAACATGGACCAAACTGTTCTaGAATCTCCGTTTTACGAAG +
Preference number: 4 (lower is better)
Translates to: NVATLLVFNVHCVIYCTTWTKLF*NLRFTK
Trigger: CTTCGTAAAACGGAGATTCCAGAACAGTTTGGTCCA...TGTTGTACAATATATGACACAGTGCACATTGAATACCAACAAGGTTGCAACGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CCA 90 bp AACGTTGCAACCTTGTTGGTATTCAATGTGCACTGTGTCATATATTGTACAACACACACTCCAAAAACATaGAATCCCAAAGTGCAGGTA +
Preference number: 4 (lower is better)
Translates to: NVATLLVFNVHCVIYCTTHTPKT*NPKVQV
Trigger: TACCTGCACTTTGGGATTCCATGTTTTTGGAGTGTG...TGTTGTACAATATATGACACAGTGCACATTGAATACCAACAAGGTTGCAACGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CCA 90 bp TTGAGTATGGTAATTAGGCCAAATCCTTTATGGTTATCTCCCCTGATGAATGCTATCTTCAATAATACATaGTGTTTACTGGTGCCCTGC +
Preference number: 4 (lower is better)
Translates to: LSMVIRPNPLWLSPLMNAIFNNT*CLLVPC
Trigger: GCAGGGCACCAGTAAACACCATGTATTATTGAAGAT...AGCATTCATCAGGGGAGATAACCATAAAGGATTTGGCCTAATTACCATACTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262233.11
ENST00000649352.1
CDS-3UTR CCA 90 bp TTAAACAAAACAGAAATCACAGTGACCAAGGGTAATGCGAGTCTGTGTCTTCCTATCTGTTTAATCTTTTaGTTGCTGGCACAGCAGTTT +
Preference number: 4 (lower is better)
Translates to: LNKTEITVTKGNASLCLPICLIF*LLAQQF
Trigger: AAACTGCTGTGCCAGCAACCAAAAGATTAAACAGAT...AGGAAGACACAGACTCGCATTACCCTTGGTCACTGTGATTTCTGTTTTGTTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
3UTR CAA 72 bp GGTACGCTCGAGAGAGATCTTTCTGACTTGGTCTACTaGGTCATAAAATACAAATATACAATGTCCATAAGC +
Preference number: 4 (lower is better)
Translates to: GTLERDLSDLVY*VIKYKYTMSIS
Trigger: GCTTATGGACATTGTATATTTGTATTTTATGACCAAGTAGACCAAGTCAGAAAGATCTCTCTCGAGCGTACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR TCA 90 bp AATTTCTGCCACCTCCGTTTAACGCATCAGAACTCAATCTTATCTCATACTGTAAAAAACCTATTCCAATaGCGTGGAGAGTATTCAATG +
Preference number: 4 (lower is better)
Translates to: NFCHLRLTHQNSILSHTVKNLFQ*RGEYSM
Trigger: CATTGAATACTCTCCACGTCATTGGAATAGGTTTTT...TACAGTATGAGATAAGATTGAGTTCTGATGCGTTAAACGGAGGTGGCAGAAATT
38% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp CAAGGATACATACAAACAGATTCATCTTCAATAATACATGGTGTTTACTGGTGCAGTTTTTCTTCTTTCTaGCAGTCCCATACAGAGAGC +
Preference number: 4 (lower is better)
Translates to: QGYIQTDSSSIIHGVYWCSFSSF*QSHTES
Trigger: GCTCTCTGTATGGGACTGGCAGAAAGAAGAAAAACT...GCACCAGTAAACACCATGTATTATTGAAGATGAATCTGTTTGTATGTATCCTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR GCA 90 bp TTAAACAAAACAGAAATCACAGTGACCAAGGGTAATGCGAGTCTGTGTCTTCCTTTCTCGAATAATCCTTaGTTCTTATTAAGGGAGCTT +
Preference number: 4 (lower is better)
Translates to: LNKTEITVTKGNASLCLPFSNNP*FLLREL
Trigger: AAGCTCCCTTAATAAGAAGCAAGGATTATTCGAGAA...AGGAAGACACAGACTCGCATTACCCTTGGTCACTGTGATTTCTGTTTTGTTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR TCA 90 bp CAATTCCTCAACAGCCATCGTGGTTCAGTACCTCATTATCATCATAAATATTTGAAAAACCTATTCCAATaGCGTGGAGAGTATTCAATG +
Preference number: 4 (lower is better)
Translates to: QFLNSHRGSVPHYHHKYLKNLFQ*RGEYSM
Trigger: CATTGAATACTCTCCACGTCATTGGAATAGGTTTTT...CAAATATTTATGATGATAATGAGGTACTGAACCACGATGGCTGTTGAGGAATTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS TCA 90 bp ACGTGTCGTACAGGCTGCTGTAGCTGGAGAAGCCGTCCTCCATGCTaGGGCCGCCGGGCCGCGCCCGCTCCCCGGCCCGGCCGCGCCGCC +
Preference number: 5 (lower is better)
Translates to: TCRTGCCSWRSRPPC*GRRAAPAPRPGRAA
Trigger: GGCGGCGCGGCCGGGCCGGGGAGCGGGCGCGGCCCGGCGGCCTCAGCATGGAGGACGGCTTCTCCAGCTACAGCAGCCTGTACGACACGT
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000555096.5
CDS CCA 90 bp AGGGTCACTCAGAGCCTCAGCGGCTGTCACCCACCCAGCAGGGCTTaGGGCTCCTCCGCGTCCAGCCCCAGGCAGCGTCCCGCCCCGGCC +
Preference number: 5 (lower is better)
Translates to: RVTQSLSGCHPPSRA*GSSASSPRQRPAPA
Trigger: GGCCGGGGCGGGACGCTGCCTGGGGCTGGACGCGGAGGAGCCCCAAGCCCTGCTGGGTGGGTGACAGCCGCTGAGGCTCTGAGTGACCCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554479.5
CDS CCA 90 bp CAGCAGAAGCGCTGTCATCGGCGGAGGGGCCCTCGCCGTCCGACATaGTGTGGAAGATGGGCGGCCGGCTGGCCACCAGCCTGCAGGGTC +
Preference number: 5 (lower is better)
Translates to: QQKRCHRRRGPRRPT*CGRWAAGWPPACRV
Trigger: GACCCTGCAGGCTGGTGGCCAGCCGGCCGCCCATCTTCCACACCATGTCGGACGGCGAGGGCCCCTCCGCCGATGACAGCGCTTCTGCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554479.5
ENST00000555145.5
CDS CCA 90 bp AGGGGCCCTCGCCGTCCGACATGGTGTGGAAGATGGGCGGCCGGCTaGCCACCAGCCTGCAGGGTCACTCAGAGCCTCAGCGGCTGTCAC +
Preference number: 5 (lower is better)
Translates to: RGPRRPTWCGRWAAG*PPACRVTQSLSGCH
Trigger: GTGACAGCCGCTGAGGCTCTGAGTGACCCTGCAGGCTGGTGGCCAGCCGGCCGCCCATCTTCCACACCATGTCGGACGGCGAGGGCCCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554479.5
ENST00000555145.5
CDS CCA 90 bp TGTCATCGGCGGAGGGGCCCTCGCCGTCCGACATGGTGTGGAAGATaGGCGGCCGGCTGGCCACCAGCCTGCAGGGTCACTCAGAGCCTC +
Preference number: 5 (lower is better)
Translates to: CHRRRGPRRPTWCGR*AAGWPPACRVTQSL
Trigger: GAGGCTCTGAGTGACCCTGCAGGCTGGTGGCCAGCCGGCCGCCCATCTTCCACACCATGTCGGACGGCGAGGGCCCCTCCGCCGATGACA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554479.5
ENST00000555145.5
CDS CCA 90 bp GAAGCGCTGTCATCGGCGGAGGGGCCCTCGCCGTCCGACATGGTGTaGAAGATGGGCGGCCGGCTGGCCACCAGCCTGCAGGGTCACTCA +
Preference number: 5 (lower is better)
Translates to: EALSSAEGPSPSDMV*KMGGRLATSLQGHS
Trigger: TGAGTGACCCTGCAGGCTGGTGGCCAGCCGGCCGCCCATCTTCCACACCATGTCGGACGGCGAGGGCCCCTCCGCCGATGACAGCGCTTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554479.5
ENST00000555145.5
CDS GCA 90 bp CGTCCGACATGGTGTGGAAGATGGGCGGCCGGCTGGCCACCAGCCTaGAGGGTCACTCAGAGCCTCAGCGGCTGTCACCCACCCAGCAGG +
Preference number: 5 (lower is better)
Translates to: RPTWCGRWAAGWPPA*RVTQSLSGCHPPSR
Trigger: CCTGCTGGGTGGGTGACAGCCGCTGAGGCTCTGAGTGACCCTGCAGGCTGGTGGCCAGCCGGCCGCCCATCTTCCACACCATGTCGGACG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554479.5
ENST00000555145.5
CDS CCA 90 bp CAAGGCATCTGCCATACACCCAGGGCTGGGATGGACCCAGAAAGCTaGCAGTGCACGGCCGAGGTTCCCAGGGTGCCGACCAGGGCGCCT +
Preference number: 5 (lower is better)
Translates to: QGICHTPRAGMDPES*QCTAEVPRVPTRAP
Trigger: AGGCGCCCTGGTCGGCACCCTGGGAACCTCGGCCGTGCACTGCCAGCTTTCTGGGTCCATCCCAGCCCTGGGTGTATGGCAGATGCCTTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553720.5
CDS GCA 90 bp ATCTGCCATACACCCAGGGCTGGGATGGACCCAGAAAGCTGGCAGTaGACGGCCGAGGTTCCCAGGGTGCCGACCAGGGCGCCTGTCCAA +
Preference number: 5 (lower is better)
Translates to: ICHTPRAGMDPESWQ*TAEVPRVPTRAPVQ
Trigger: TTGGACAGGCGCCCTGGTCGGCACCCTGGGAACCTCGGCCGTGCACTGCCAGCTTTCTGGGTCCATCCCAGCCCTGGGTGTATGGCAGAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553720.5
CDS GCA 90 bp GCACGGCCGAGGTTCCCAGGGTGCCGACCAGGGCGCCTGTCCAAGTaGTGGACACAGCTTCTGGGCATGCTGTCTCATCCCTTACTTCAG +
Preference number: 5 (lower is better)
Translates to: ARPRFPGCRPGRLSK*WTQLLGMLSHPLLQ
Trigger: CTGAAGTAAGGGATGAGACAGCATGCCCAGAAGCTGTGTCCAGCACTTGGACAGGCGCCCTGGTCGGCACCCTGGGAACCTCGGCCGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553720.5
CDS CCA 90 bp GTCCACCCCTCTCTGGGCCTAAGGCAGGTAGATTCTGGGACCTCCTaGGGTCTTTGCAGCCTGTGCTCCAGGGGCCCTAGCTGTGTGGGA +
Preference number: 5 (lower is better)
Translates to: VHPSLGLRQVDSGTS*GLCSLCSRGPSCVG
Trigger: TCCCACACAGCTAGGGCCCCTGGAGCACAGGCTGCAAAGACCCCAGGAGGTCCCAGAATCTACCTGCCTTAGGCCCAGAGAGGGGTGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327921.13
CDS CCA 90 bp CGGCCGAGGTTCCCAGGGTGCCGACCAGGGCGCCTGTCCAAGTGCTaGACACAGCTTCTGGGCATGCTGTCTCATCCCTTACTTCAGCCA +
Preference number: 5 (lower is better)
Translates to: RPRFPGCRPGRLSKC*TQLLGMLSHPLLQP
Trigger: TGGCTGAAGTAAGGGATGAGACAGCATGCCCAGAAGCTGTGTCCAGCACTTGGACAGGCGCCCTGGTCGGCACCCTGGGAACCTCGGCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553720.5
CDS GCA 90 bp CACCTCGGCCTGGCTGCTCCTCTTCCCATCCAGGCTCCTGCTTTCTaGCACAAGATCCTGCGCATCTGGGTGATGGCAAGTAGGGCAGAC +
Preference number: 5 (lower is better)
Translates to: HLGLAAPLPIQAPAF*HKILRIWVMASRAD
Trigger: GTCTGCCCTACTTGCCATCACCCAGATGCGCAGGATCTTGTGGCAGAAAGCAGGAGCCTGGATGGGAAGAGGAGCAGCCAGGCCGAGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327921.13
CDS GCA 90 bp TCTGGACTCTCTGCTCCAGTGAAGCAATGCGGTCTGTCACCTCCATaGTACTTGCAGCAGAAGCGCTGTCATCGGCGGAGGGGCCCTCGC +
Preference number: 5 (lower is better)
Translates to: SGLSAPVKQCGLSPP*YLQQKRCHRRRGPR
Trigger: GCGAGGGCCCCTCCGCCGATGACAGCGCTTCTGCTGCAAGTAGCATGGAGGTGACAGACCGCATTGCTTCACTGGAGCAGAGAGTCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554479.5
ENST00000555145.5
CDS CCA 90 bp GACTTAGCACGGGACTGGCAAGTCAGCTCGAACCTTCGCTCACACTaGGCCAGAGAGGCTATCCTGGTACCAGGCTGGAAGTCCCCCGTG +
Preference number: 5 (lower is better)
Translates to: DLARDWQVSSNLRSH*AREAILVPGWKSPV
Trigger: CACGGGGGACTTCCAGCCTGGTACCAGGATAGCCTCTCTGGCCCAGTGTGAGCGAAGGTTCGAGCTGACTTGCCAGTCCCGTGCTAAGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000556835.5
ENST00000649352.1
CDS CCA 90 bp AGAAGCGCTGTCATATTTCGGCCGTTTCCACGCCGCGGCTCACTGTaGCCCACATCCGACCGGCGCGTTCCTCTGTCCACACGTTTTTCC +
Preference number: 5 (lower is better)
Translates to: RSAVIFRPFPRRGSL*PTSDRRVPLSTRFS
Trigger: GGAAAAACGTGTGGACAGAGGAACGCGCCGGTCGGATGTGGGCCACAGTGAGCCGCGGCGTGGAAACGGCCGAAATATGACAGCGCTTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556835.5
CDS CCA 90 bp GGGCTGTTAAATCTCAAGGCATCTGCCATACACCCAGGGCTGGGATaGACCCAGAAAGCTGGCAGTGCACGGCCGAGGTTCCCAGGGTGC +
Preference number: 5 (lower is better)
Translates to: GLLNLKASAIHPGLG*TQKAGSARPRFPGC
Trigger: GCACCCTGGGAACCTCGGCCGTGCACTGCCAGCTTTCTGGGTCCATCCCAGCCCTGGGTGTATGGCAGATGCCTTGAGATTTAACAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553720.5
CDS-3UTR CAA 90 bp GTGACCAAGGGTAATGCGAGTCTGTGTCTTCCTTGCCCATGCTGCTCCCCACAGGACCTCCTGGGGTCTTaGCAGCCTGTGCTCCAGGGG +
Preference number: 5 (lower is better)
Translates to: VTKGNASLCLPCPCCSPQDLLGS*QPVLQG
Trigger: CCCCTGGAGCACAGGCTGCAAAGACCCCAGGAGGTC...CTGTGGGGAGCAGCATGGGCAAGGAAGACACAGACTCGCATTACCCTTGGTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327921.13
CDS CCA 90 bp ACAAAACTCTGCCTATTTCGGCCGTTTCCACGCCGCGGCTCACTGTaGCCCACATCCGACCGGCGCGTTCCTCTGTCCACACGTTTTTCC +
Preference number: 5 (lower is better)
Translates to: TKLCLFRPFPRRGSL*PTSDRRVPLSTRFS
Trigger: GGAAAAACGTGTGGACAGAGGAACGCGCCGGTCGGATGTGGGCCACAGTGAGCCGCGGCGTGGAAACGGCCGAAATAGGCAGAGTTTTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649352.1
CDS-3UTR CAA 90 bp GTGACCAAGGGTAATGCGAGTCTGTGTCTTCCTTGCCCATGCTGCTCCCCACAGGCCCGACAGACGGCATaGATGTCGGTTCCGTCCGAG +
Preference number: 5 (lower is better)
Translates to: VTKGNASLCLPCPCCSPQARQTA*MSVPSE
Trigger: CTCGGACGGAACCGACATCAATGCCGTCTGTCGGGC...CTGTGGGGAGCAGCATGGGCAAGGAAGACACAGACTCGCATTACCCTTGGTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS TCA 90 bp TCCTCTGTCCACACGTTTTTCCGCGGCAGCAAGGCCCTGCCTCAGTaGGACTTAGCACGGGACTGGCAAGTCAGCTCGAACCTTCGCTCA +
Preference number: 5 (lower is better)
Translates to: SSVHTFFRGSKALPQ*DLARDWQVSSNLRS
Trigger: TGAGCGAAGGTTCGAGCTGACTTGCCAGTCCCGTGCTAAGTCTCACTGAGGCAGGGCCTTGCTGCCGCGGAAAAACGTGTGGACAGAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000556835.5
ENST00000649352.1
CDS TCA 90 bp GGGAAGAGAAGGGCCAGTGGGGTGTCTCTTCACCACTGGGTTCCATaGAAACAAGAGCCCCTCCTAGAGCAGACAGTGCCTGCAGCAGGC +
Preference number: 5 (lower is better)
Translates to: GKRRASGVSLHHWVP*KQEPLLEQTVPAAG
Trigger: GCCTGCTGCAGGCACTGTCTGCTCTAGGAGGGGCTCTTGTTTTCATGGAACCCAGTGGTGAAGAGACACCCCACTGGCCCTTCTCTTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554111.1
CDS CCA 90 bp CACTGGAAGAGCTGCTGGTGGAGCCTGTGCGATTCCGGTTTCCTCTaGAATCCCCATTGCTTTCCCTTCGACCCCCAGGAGACACTCGTT +
Preference number: 5 (lower is better)
Translates to: HWKSCWWSLCDSGFL*NPHCFPFDPQETLV
Trigger: AACGAGTGTCTCCTGGGGGTCGAAGGGAAAGCAATGGGGATTCCAGAGGAAACCGGAATCGCACAGGCTCCACCAGCAGCTCTTCCAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000554479.5
ENST00000556714.5
ENST00000556758.1
ENST00000557741.1
ENST00000649352.1
CDS CCA 90 bp GACGTGGAGAGTATTCAATGTCACAGAATCCCAGATGCGCACATGTaGGGGCAATTGCGGGCGAGGTGGCGTGTGCCTGTACTCCCAGCT +
Preference number: 5 (lower is better)
Translates to: DVESIQCHRIPDAHM*GQLRARWRVPVLPA
Trigger: AGCTGGGAGTACAGGCACACGCCACCTCGCCCGCAATTGCCCCCACATGTGCGCATCTGGGATTCTGTGACATTGAATACTCTCCACGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555812.5
CDS-3UTR CAA 90 bp GTGACCAAGGGTAATGCGAGTCTGTGTCTTCCTTGCCCATGCTGCTCCCCACAGCCTCTGGAATCCCCATaGCTTTCCCTTCGACCCCCA +
Preference number: 5 (lower is better)
Translates to: VTKGNASLCLPCPCCSPQPLESP*LSLRPP
Trigger: TGGGGGTCGAAGGGAAAGCAATGGGGATTCCAGAGG...CTGTGGGGAGCAGCATGGGCAAGGAAGACACAGACTCGCATTACCCTTGGTCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS TCA 90 bp GACTGCAACCACAGACCCTCTATTATTTTGTCCCAGACGGGACGGTaGCCCACAGCGTCCCAGAGAGTGGCATGCTTGTCATGCCCACAG +
Preference number: 5 (lower is better)
Translates to: DCNHRPSIILSQTGR*PTASQRVACLSCPQ
Trigger: CTGTGGGCATGACAAGCATGCCACTCTCTGGGACGCTGTGGGTCACCGTCCCGTCTGGGACAAAATAATAGAGGGTCTGTGGTTGCAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557313.5
CDS GCA 90 bp TCTGGACTCTCTGCTCCAGTGAAGCAATGCGGTCTGTCACCTCCATaGTACTTGCAGCAGAAGCGCTGTCATCCAGCCGTCGTGAAGCAG +
Preference number: 5 (lower is better)
Translates to: SGLSAPVKQCGLSPP*YLQQKRCHPAVVKQ
Trigger: CTGCTTCACGACGGCTGGATGACAGCGCTTCTGCTGCAAGTAGCATGGAGGTGACAGACCGCATTGCTTCACTGGAGCAGAGAGTCCAGA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327921.13
CDS GCA 90 bp AGACGTTGCAGGCCTGACTCAAGGGCTGTTAAATCTCAAGGCATCTaGCATACACCCAGGGCTGGGATGGACCCAGAAAGCTGGCAGTGC +
Preference number: 5 (lower is better)
Translates to: RRCRPDSRAVKSQGI*HTPRAGMDPESWQC
Trigger: GCACTGCCAGCTTTCTGGGTCCATCCCAGCCCTGGGTGTATGGCAGATGCCTTGAGATTTAACAGCCCTTGAGTCAGGCCTGCAACGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553720.5
CDS GCA 90 bp GGATGTCGTCTTCTTGCATCTGGACTCTCTGCTCCAGTGAAGCAATaGGGTCTGTCACCTCCATGCTACTTGCAGCAGAAGCGCCAGCCG +
Preference number: 5 (lower is better)
Translates to: GCRLLASGLSAPVKQ*GLSPPCYLQQKRQP
Trigger: CGGCTGGCGCTTCTGCTGCAAGTAGCATGGAGGTGACAGACCGCATTGCTTCACTGGAGCAGAGAGTCCAGATGCAAGAAGACGACATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556199.1
CDS CCA 90 bp AGAGGCCGGCTTTACGAGCAGAGCGCCGGTATCCCACTTCCCTCGTaGCCATTAAGCAAGATGGGCTGGGGATTTCCAAGAAGAGAGAAG +
Preference number: 5 (lower is better)
Translates to: RGRLYEQSAGIPLPS*PLSKMGWGFPRREK
Trigger: CTTCTCTCTTCTTGGAAATCCCCAGCCCATCTTGCTTAATGGCCACGAGGGAAGTGGGATACCGGCGCTCTGCTCGTAAAGCCGGCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327921.13
ENST00000556199.1
CDS-3UTR CAA 90 bp CATATATTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGCGCCCGGCCCGACAGACGGCATaGATGTCGGTTCCGTCCGAG +
Preference number: 5 (lower is better)
Translates to: HILYNKSEHGTADPLWRPARQTA*MSVPSE
Trigger: CTCGGACGGAACCGACATCAATGCCGTCTGTCGGGC...CGGGCGCCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp TTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGCGCCCGCTGACAGAGTCTGTGTCTTCCTaGCCCATGCTGCTCCCCACA +
Preference number: 5 (lower is better)
Translates to: LYNKSEHGTADPLWRPLTESVSS*PMLLPT
Trigger: TGTGGGGAGCAGCATGGGCAAGGAAGACACAGACTC...TGTCAGCGGGCGCCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS TCA 90 bp CGCCTGTTGACAGGAGTTTCTTCTCATGGGCCCGACAGACGGCATTaGTGTCGGTTCCGTCCGAGCCTTCTGGCCACACTCCAAAAACAT +
Preference number: 5 (lower is better)
Translates to: RLLTGVSSHGPDRRH*CRFRPSLLATLQKH
Trigger: ATGTTTTTGGAGTGTGGCCAGAAGGCTCGGACGGAACCGACATCAATGCCGTCTGTCGGGCCCATGAGAAGAAACTCCTGTCAACAGGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000553313.1
ENST00000649352.1
CDS TCA 90 bp GGGCCAGAGAGGCTATCCTGGTACCAGGCTGGAAGTCCCCCGTGTTaGGGACTCGACGCAGCTAAAACATCGCTTTGTGGTTTCTCTATG +
Preference number: 5 (lower is better)
Translates to: GPERLSWYQAGSPPC*GLDAAKTSLCGFSM
Trigger: CATAGAGAAACCACAAAGCGATGTTTTAGCTGCGTCGAGTCCTCAACACGGGGGACTTCCAGCCTGGTACCAGGATAGCCTCTCTGGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649352.1
CDS GCA 90 bp TCTGGACTCTCTGCTCCAGTGAAGCAATGCGGTCTGTCACCTCCATaGTACTTGCAGCAGAAGCGCTGTCATGTGTCGTACAGGCTGCTG +
Preference number: 5 (lower is better)
Translates to: SGLSAPVKQCGLSPP*YLQQKRCHVSYRLL
Trigger: CAGCAGCCTGTACGACACATGACAGCGCTTCTGCTGCAAGTAGCATGGAGGTGACAGACCGCATTGCTTCACTGGAGCAGAGAGTCCAGA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556714.5
CDS CCA 90 bp TGCACTTTGCCAAAGTCGTCGCCTGTTGACAGGAGTTTCTTCTCATaGGCCCGACAGACGGCATTGATGTCGGTTCCGTCCGAGCCTTCT +
Preference number: 5 (lower is better)
Translates to: CTLPKSSPVDRSFFS*ARQTALMSVPSEPS
Trigger: AGAAGGCTCGGACGGAACCGACATCAATGCCGTCTGTCGGGCCCATGAGAAGAAACTCCTGTCAACAGGCGACGACTTTGGCAAAGTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000553313.1
ENST00000649352.1
CDS-3UTR CAA 90 bp TTCCTGACCCCGGAGGGGGATGGTAGAGAGCCAGTAGGTTTCTTTGGTAACACAGAAGCGCTGTCATCGTaGCAGAACTGGAGCAGCGAG +
Preference number: 5 (lower is better)
Translates to: FLTPEGDGREPVGFFGNTEALSS*QNWSSE
Trigger: CTCGCTGCTCCAGTTCTGCAACGATGACAGCGCTTC...TGTGTTACCAAAGAAACCTACTGGCTCTCTACCATCCCCCTCCGGGGTCAGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555096.5
CDS-3UTR CAA 90 bp GTGACCAAGGGTAATGCGAGTCTGTGTCTTCCTTGCCCATGCTGCTCCCCACAGCTGGATGTCGTCTTCTaGCATCTGGACTCTCTGCTC +
Preference number: 5 (lower is better)
Translates to: VTKGNASLCLPCPCCSPQLDVVF*HLDSLL
Trigger: GAGCAGAGAGTCCAGATGCAAGAAGACGACATCCAG...CTGTGGGGAGCAGCATGGGCAAGGAAGACACAGACTCGCATTACCCTTGGTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp TTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGCGCCCGCTGACAGAAAAGCAGCTGCCCTaGGTACCTGGTGGAGCCTTT +
Preference number: 5 (lower is better)
Translates to: LYNKSEHGTADPLWRPLTEKQLP*VPGGAF
Trigger: AAAGGCTCCACCAGGTACCAAGGGCAGCTGCTTTTC...TGTCAGCGGGCGCCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS GCA 90 bp TCTGGACTCTCTGCTCCAGTGAAGCAATGCGGTCTGTCACCTCCATaGTACTTGCAGCAGAAGCGCTGTCATCGTTGCAGAACTGGAGCA +
Preference number: 5 (lower is better)
Translates to: SGLSAPVKQCGLSPP*YLQQKRCHRCRTGA
Trigger: TGCTCCAGTTCTGCAACGATGACAGCGCTTCTGCTGCAAGTAGCATGGAGGTGACAGACCGCATTGCTTCACTGGAGCAGAGAGTCCAGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000555096.5
CDS GCA 90 bp TCTGGACTCTCTGCTCCAGTGAAGCAATGCGGTCTGTCACCTCCATaGTACTTGCAGCAGAAGCGCTGTCATATTTCGGCCGTTTCCACG +
Preference number: 5 (lower is better)
Translates to: SGLSAPVKQCGLSPP*YLQQKRCHISAVST
Trigger: CGTGGAAACGGCCGAAATATGACAGCGCTTCTGCTGCAAGTAGCATGGAGGTGACAGACCGCATTGCTTCACTGGAGCAGAGAGTCCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556835.5
CDS CCA 90 bp GAGGAGAGAACATGGTCACACACCCCATCTGTAGGAACCTATCTGTaGGGATGGCCTGTGACCGCTCTGCATCCAGGATGTTCAAGATGC +
Preference number: 5 (lower is better)
Translates to: EERTWSHTPSVGTYL*GWPVTALHPGCSRC
Trigger: GCATCTTGAACATCCTGGATGCAGAGCGGTCACAGGCCATCCCCACAGATAGGTTCCTACAGATGGGGTGTGTGACCATGTTCTCTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327921.13
CDS-3UTR CAA 90 bp CAAGAAGGTGGCAAAATGTCTCACCGTGAATCAGGGCGTGTGAACAAGGGATGGGAAGCGCTGTCATCGTaGCAGAACTGGAGCAGCGAG +
Preference number: 5 (lower is better)
Translates to: QEGGKMSHRESGRVNKGWEALSS*QNWSSE
Trigger: CTCGCTGCTCCAGTTCTGCAACGATGACAGCGCTTC...CCATCCCTTGTTCACACGCCCTGATTCACGGTGAGACATTTTGCCACCTTCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262233.11
ENST00000334192.8
CDS-3UTR CAA 90 bp TTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGCGCCCGCTGACACTGGATGTCGTCTTCTaGCATCTGGACTCTCTGCTC +
Preference number: 5 (lower is better)
Translates to: LYNKSEHGTADPLWRPLTLDVVF*HLDSLL
Trigger: GAGCAGAGAGTCCAGATGCAAGAAGACGACATCCAG...TGTCAGCGGGCGCCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp CTGACCCCGGAGGGGGATGGTAGAGAGCCAGTAGGTTTCTTTGGTAACACAGTGCTGGATGTCGTCTTCTaGCATCTGGACTCTCTGCTC +
Preference number: 5 (lower is better)
Translates to: LTPEGDGREPVGFFGNTVLDVVF*HLDSLL
Trigger: GAGCAGAGAGTCCAGATGCAAGAAGACGACATCCAG...CACTGTGTTACCAAAGAAACCTACTGGCTCTCTACCATCCCCCTCCGGGGTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555096.5
CDS-3UTR CAA 90 bp TGTGAAGAGGCTGACCGCATCTGGTTAGGCAGGACGGTGTCACTGAAACTTGGACAGAGAGTGGCATGCTaGTCATGCCCACAGGTCAAG +
Preference number: 5 (lower is better)
Translates to: CEEADRIWLGRTVSLKLGQRVAC*SCPQVK
Trigger: CTTGACCTGTGGGCATGACAAGCATGCCACTCTCTG...TCCAAGTTTCAGTGACACCGTCCTGCCTAACCAGATGCGGTCAGCCTCTTCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp TCCCAGCTTAACATGGTGGAAGGAGCACAGATTTTGAGGCCAGCTGGATCCGTGGAAGGAGCACAGATTTaGAGGCCAGCTGGATCCGTG +
Preference number: 5 (lower is better)
Translates to: SQLNMVEGAQILRPAGSVEGAQI*RPAGSV
Trigger: CACGGATCCAGCTGGCCTCAAAATCTGTGCTCCTTC...CACGGATCCAGCTGGCCTCAAAATCTGTGCTCCTTCCACCATGTTAAGCTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557741.1
CDS TCA 90 bp CAACCAATACTTCCCAGCTTAACATGGTGGAAGGAGCACAGATTTTaGGGCCAGCTGGATCCGTGTTCTAGGGCTTGGGTGAGGGGCTTC +
Preference number: 5 (lower is better)
Translates to: QPILPSLTWWKEHRF*GQLDPCSRAWVRGF
Trigger: GAAGCCCCTCACCCAAGCCCTAGAACACGGATCCAGCTGGCCTCAAAATCTGTGCTCCTTCCACCATGTTAAGCTGGGAAGTATTGGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557741.1
CDS GCA 90 bp GGATGTCGTCTTCTTGCATCTGGACTCTCTGCTCCAGTGAAGCAATaGGGTCTGTCACCTCCATGCTACTTGCAGCAGAAGCGCTGTCAT +
Preference number: 5 (lower is better)
Translates to: GCRLLASGLSAPVKQ*GLSPPCYLQQKRCH
Trigger: ATGACAGCGCTTCTGCTGCAAGTAGCATGGAGGTGACAGACCGCATTGCTTCACTGGAGCAGAGAGTCCAGATGCAAGAAGACGACATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000553720.5
ENST00000554479.5
ENST00000555096.5
ENST00000555145.5
ENST00000556714.5
ENST00000556758.1
ENST00000556835.5
ENST00000556947.1
ENST00000649352.1
CDS GCA 90 bp ATGTGGCTTGGAGCCCTGAACTGCGAGCAGGGGTATGAGAAGAGGTaGACTTTGCCAAAGTCGTCGCCTGTTGACAGGAGTTTCTTCTCA +
Preference number: 5 (lower is better)
Translates to: MWLGALNCEQGYEKR*TLPKSSPVDRSFFS
Trigger: TGAGAAGAAACTCCTGTCAACAGGCGACGACTTTGGCAAAGTGCACCTCTTCTCATACCCCTGCTCGCAGTTCAGGGCTCCAAGCCACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000553313.1
ENST00000649352.1
CDS CCA 90 bp TTATTTTGTCCCAGACGGGACGGTGACCCACAGCGTCCCAGAGAGTaGCATGCTTGTCATGCCCACAGGTCAAGAACTGAGATTTTGAGG +
Preference number: 5 (lower is better)
Translates to: LFCPRRDGDPQRPRE*HACHAHRSRTEILR
Trigger: CCTCAAAATCTCAGTTCTTGACCTGTGGGCATGACAAGCATGCCACTCTCTGGGACGCTGTGGGTCACCGTCCCGTCTGGGACAAAATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000554111.1
ENST00000557313.5
ENST00000649352.1
CDS CCA 90 bp AGAACATGGTCACACACCCCATCTGTAGGAACCTATCTGTGGGGATaGCCTGTGACCGCTCTGCATCCAGGATGTTCAAGATGCAAAGCC +
Preference number: 5 (lower is better)
Translates to: RTWSHTPSVGTYLWG*PVTALHPGCSRCKA
Trigger: GGCTTTGCATCTTGAACATCCTGGATGCAGAGCGGTCACAGGCCATCCCCACAGATAGGTTCCTACAGATGGGGTGTGTGACCATGTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327921.13
CDS-3UTR CAA 90 bp TGTGAAGAGGCTGACCGCATCTGGTTAGGCAGGACGGTGTCACTGAAACTTGGACTGGATGTCGTCTTCTaGCATCTGGACTCTCTGCTC +
Preference number: 5 (lower is better)
Translates to: CEEADRIWLGRTVSLKLGLDVVF*HLDSLL
Trigger: GAGCAGAGAGTCCAGATGCAAGAAGACGACATCCAG...TCCAAGTTTCAGTGACACCGTCCTGCCTAACCAGATGCGGTCAGCCTCTTCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp GTGACCAAGGGTAATGCGAGTCTGTGTCTTCCTTGCCCATGCTGCTCCCCACAGAACACAGTGCCATTGTaGACCGTGGTTCTTAAAGGC +
Preference number: 5 (lower is better)
Translates to: VTKGNASLCLPCPCCSPQNTVPL*TVVLKG
Trigger: GCCTTTAAGAACCACGGTCAACAATGGCACTGTGTT...CTGTGGGGAGCAGCATGGGCAAGGAAGACACAGACTCGCATTACCCTTGGTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp GCTGGCACAGCAGTTTCTTTCCTGACCCCGGAGGGGGATGGTAGAGAGCCAGTACTCTTGATGTTACTTTaGGTTGCTGGCACAGCAGTT +
Preference number: 5 (lower is better)
Translates to: AGTAVSFLTPEGDGREPVLLMLL*VAGTAV
Trigger: AACTGCTGTGCCAGCAACCAAAAGTAACATCAAGAG...TACTGGCTCTCTACCATCCCCCTCCGGGGTCAGGAAAGAAACTGCTGTGCCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555096.5
CDS-3UTR CAA 90 bp GTGACCAAGGGTAATGCGAGTCTGTGTCTTCCTTGCCCATGCTGCTCCCCACAGCTGAATACAGGCTCCTaGGGTTTGCTTTCACTGTTC +
Preference number: 5 (lower is better)
Translates to: VTKGNASLCLPCPCCSPQLNTGS*GLLSLF
Trigger: GAACAGTGAAAGCAAACCCAAGGAGCCTGTATTCAG...CTGTGGGGAGCAGCATGGGCAAGGAAGACACAGACTCGCATTACCCTTGGTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp CATATATTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGCGCCCGCAGAGAGTGGCATGCTaGTCATGCCCACAGGTCAAG +
Preference number: 5 (lower is better)
Translates to: HILYNKSEHGTADPLWRPQRVAC*SCPQVK
Trigger: CTTGACCTGTGGGCATGACAAGCATGCCACTCTCTG...CGGGCGCCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp TTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGCGCCCGCTGACACGTAGTCTCCGGAATTaGACACGAGGAACTGTGAGT +
Preference number: 5 (lower is better)
Translates to: LYNKSEHGTADPLWRPLTRSLRN*TRGTVS
Trigger: ACTCACAGTTCCTCGTGTCAAATTCCGGAGACTACG...TGTCAGCGGGCGCCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp AGTAATGAAGCTGGAATGACCCGAGCACTTGCCCACTCGCGTGTACTTCCTCCCTTCCACACTTACGACTaGCTTACAGGCAGAGGGAAC +
Preference number: 5 (lower is better)
Translates to: SNEAGMTRALAHSRVLPPFHTYD*LTGRGN
Trigger: GTTCCCTCTGCCTGTAAGCAAGTCGTAAGTGTGGAA...GGGAGGAAGTACACGCGAGTGGGCAAGTGCTCGGGTCATTCCAGCTTCATTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557313.5
CDS-3UTR CAA 90 bp GTGACCAAGGGTAATGCGAGTCTGTGTCTTCCTTGCCCATGCTGCTCCCCACAGGAAGAGCTGGTCCTCTaGATGTTACTTGGTGTCGAT +
Preference number: 5 (lower is better)
Translates to: VTKGNASLCLPCPCCSPQEELVL*MLLGVD
Trigger: ATCGACACCAAGTAACATCAAGAGGACCAGCTCTTC...CTGTGGGGAGCAGCATGGGCAAGGAAGACACAGACTCGCATTACCCTTGGTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS TCA 90 bp CCAGAGCTCATCAGTGTGACCCTGAGTAATGGGTGTGAAGTCCCCTaGCAGAGTGCCCTGCAGGACAAAGTTTCGAGTTGTGCCAATCAA +
Preference number: 5 (lower is better)
Translates to: PELISVTLSNGCEVP*QSALQDKVSSCANQ
Trigger: TTGATTGGCACAACTCGAAACTTTGTCCTGCAGGGCACTCTGTCAGGGGACTTCACACCCATTACTCAGGGTCACACTGATGAGCTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000554111.1
ENST00000649352.1
CDS TCA 90 bp GTAATGTGCATGTTTACCTCTATTATTTTGTCCCAGACGGGACGGTaGCCCACAGCGTCCCAGAGAGTGGCATGCTTGTCATGCCCACAG +
Preference number: 5 (lower is better)
Translates to: VMCMFTSIILSQTGR*PTASQRVACLSCPQ
Trigger: CTGTGGGCATGACAAGCATGCCACTCTCTGGGACGCTGTGGGTCACCGTCCCGTCTGGGACAAAATAATAGAGGTAAACATGCACATTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554111.1
CDS GCA 90 bp GCTGATTTGAGCAGCTGGATGTCGTCTTCTTGCATCTGGACTCTCTaGTCCAGTGAAGCAATGCGGTCTGTCACCTCCATGCTACTTGCA +
Preference number: 5 (lower is better)
Translates to: ADLSSWMSSSCIWTL*SSEAMRSVTSMLLA
Trigger: TGCAAGTAGCATGGAGGTGACAGACCGCATTGCTTCACTGGAGCAGAGAGTCCAGATGCAAGAAGACGACATCCAGCTGCTCAAATCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000553720.5
ENST00000554479.5
ENST00000555096.5
ENST00000555145.5
ENST00000556199.1
ENST00000556714.5
ENST00000556758.1
ENST00000556835.5
ENST00000556947.1
ENST00000649352.1
CDS GCA 90 bp ACCACATCAGCTAGAGCTGATTTGAGCAGCTGGATGTCGTCTTCTTaGATCTGGACTCTCTGCTCCAGTGAAGCAATGCGGTCTGTCACC +
Preference number: 5 (lower is better)
Translates to: TTSARADLSSWMSSS*IWTLCSSEAMRSVT
Trigger: GGTGACAGACCGCATTGCTTCACTGGAGCAGAGAGTCCAGATGCAAGAAGACGACATCCAGCTGCTCAAATCAGCTCTAGCTGATGTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000553720.5
ENST00000554479.5
ENST00000555096.5
ENST00000555145.5
ENST00000556199.1
ENST00000556714.5
ENST00000556758.1
ENST00000556835.5
ENST00000556947.1
ENST00000649352.1
CDS GCA 90 bp TTTCACTGTTCTTTTTGCCACTGGAAGAGCTGCTGGTGGAGCCTGTaGGATTCCGGTTTCCTCTGGAATCCCCATTGCTTTCCCTTCGAC +
Preference number: 5 (lower is better)
Translates to: FHCSFCHWKSCWWSL*DSGFLWNPHCFPFD
Trigger: GTCGAAGGGAAAGCAATGGGGATTCCAGAGGAAACCGGAATCGCACAGGCTCCACCAGCAGCTCTTCCAGTGGCAAAAAGAACAGTGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000554479.5
ENST00000556714.5
ENST00000556758.1
ENST00000557741.1
ENST00000649352.1
CDS GCA 90 bp CTGCATCAGTGGTCTTTGGTAGGTCCTTTCCTGTTAAGCACGGCCTaGTGTTCCTCAGTAATGTTCAGCCGCCGAACCACATCAGCTAGA +
Preference number: 5 (lower is better)
Translates to: LHQWSLVGPFLLSTA*CSSVMFSRRTTSAR
Trigger: TCTAGCTGATGTGGTTCGGCGGCTGAACATTACTGAGGAACAGCAGGCCGTGCTTAACAGGAAAGGACCTACCAAAGACCACTGATGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555096.5
CDS CCA 90 bp TCAGCTAGAGCTGATTTGAGCAGCTGGATGTCGTCTTCTTGCATCTaGACTCTCTGCTCCAGTGAAGCAATGCGGTCTGTCACCTCCATG +
Preference number: 5 (lower is better)
Translates to: SARADLSSWMSSSCI*TLCSSEAMRSVTSM
Trigger: CATGGAGGTGACAGACCGCATTGCTTCACTGGAGCAGAGAGTCCAGATGCAAGAAGACGACATCCAGCTGCTCAAATCAGCTCTAGCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000553720.5
ENST00000554479.5
ENST00000555096.5
ENST00000555145.5
ENST00000556199.1
ENST00000556714.5
ENST00000556758.1
ENST00000556835.5
ENST00000556947.1
ENST00000649352.1
CDS CCA 90 bp ATGTTCAGCCGCCGAACCACATCAGCTAGAGCTGATTTGAGCAGCTaGATGTCGTCTTCTTGCATCTGGACTCTCTGCTCCAGTGAAGCA +
Preference number: 5 (lower is better)
Translates to: MFSRRTTSARADLSS*MSSSCIWTLCSSEA
Trigger: TGCTTCACTGGAGCAGAGAGTCCAGATGCAAGAAGACGACATCCAGCTGCTCAAATCAGCTCTAGCTGATGTGGTTCGGCGGCTGAACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000553720.5
ENST00000554479.5
ENST00000555096.5
ENST00000555145.5
ENST00000556199.1
ENST00000556714.5
ENST00000556758.1
ENST00000556835.5
ENST00000556947.1
ENST00000649352.1
CDS-3UTR CAA 90 bp AAGTCAGTTAGGAGTAGAGTCTGCTTAGCACAAGAGGGATACAAGCCCTCTCTCGAAGCGCTGTCATCGTaGCAGAACTGGAGCAGCGAG +
Preference number: 5 (lower is better)
Translates to: KSVRSRVCLAQEGYKPSLEALSS*QNWSSE
Trigger: CTCGCTGCTCCAGTTCTGCAACGATGACAGCGCTTC...GAGAGAGGGCTTGTATCCCTCTTGTGCTAAGCAGACTCTACTCCTAACTGACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262233.11
ENST00000334192.8
CDS-3UTR CAA 90 bp CATATATTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGCGCCCGTCACCTCCATGCTACTaGCAGCAGAAGCGCTGTCAT +
Preference number: 5 (lower is better)
Translates to: HILYNKSEHGTADPLWRPSPPCY*QQKRCH
Trigger: ATGACAGCGCTTCTGCTGCAAGTAGCATGGAGGTGA...CGGGCGCCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp GCAGTTTCTTTCCTGACCCCGGAGGGGGATGGTAGAGAGCCAGTAGGTTTCTTTTCAGCTAGAGCTGATTaGAGCAGCTGGATGTCGTCT +
Preference number: 5 (lower is better)
Translates to: AVSFLTPEGDGREPVGFFSARAD*SSWMSS
Trigger: AGACGACATCCAGCTGCTCAAATCAGCTCTAGCTGA...AAAGAAACCTACTGGCTCTCTACCATCCCCCTCCGGGGTCAGGAAAGAAACTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000555096.5
CDS-3UTR CAA 90 bp TTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGCGCCCGCTGACAAACACAGTGCCATTGTaGACCGTGGTTCTTAAAGGC +
Preference number: 5 (lower is better)
Translates to: LYNKSEHGTADPLWRPLTNTVPL*TVVLKG
Trigger: GCCTTTAAGAACCACGGTCAACAATGGCACTGTGTT...TGTCAGCGGGCGCCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp GTGACCAAGGGTAATGCGAGTCTGTGTCTTCCTTGCCCATGCTGCTCCCCACAGGGTAACACAGTGCCATaGTTGACCGTGGTTCTTAAA +
Preference number: 5 (lower is better)
Translates to: VTKGNASLCLPCPCCSPQGNTVP*LTVVLK
Trigger: TTTAAGAACCACGGTCAACAATGGCACTGTGTTACC...CTGTGGGGAGCAGCATGGGCAAGGAAGACACAGACTCGCATTACCCTTGGTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp TTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGCGCCCGCTGACACTGAATACAGGCTCCTaGGGTTTGCTTTCACTGTTC +
Preference number: 5 (lower is better)
Translates to: LYNKSEHGTADPLWRPLTLNTGS*GLLSLF
Trigger: GAACAGTGAAAGCAAACCCAAGGAGCCTGTATTCAG...TGTCAGCGGGCGCCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp TGTGAAGAGGCTGACCGCATCTGGTTAGGCAGGACGGTGTCACTGAAACTTGGAAGTTGCTCCTCCACGTaGTATAACACCACCACGGAT +
Preference number: 5 (lower is better)
Translates to: CEEADRIWLGRTVSLKLGSCSST*YNTTTD
Trigger: ATCCGTGGTGGTGTTATACAACGTGGAGGAGCAACT...TCCAAGTTTCAGTGACACCGTCCTGCCTAACCAGATGCGGTCAGCCTCTTCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp CATATATTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGCGCCCGCGATGTGCCCGCAACTaGTCCTGTTGCTATCGTGAT +
Preference number: 5 (lower is better)
Translates to: HILYNKSEHGTADPLWRPRCARN*SCCYRD
Trigger: ATCACGATAGCAACAGGACAAGTTGCGGGCACATCG...CGGGCGCCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS GCA 90 bp ATCAGTGGTCTTGCTTTGGTAGGTCCTTTCCTGTTAAGCACGGCCTaGTGTTCCTCAGTAATGTTCAGCCGCCGAACCACATCAGCTAGA +
Preference number: 5 (lower is better)
Translates to: ISGLALVGPFLLSTA*CSSVMFSRRTTSAR
Trigger: TCTAGCTGATGTGGTTCGGCGGCTGAACATTACTGAGGAACAGCAGGCCGTGCTTAACAGGAAAGGACCTACCAAAGCAAGACCACTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000553720.5
ENST00000554479.5
ENST00000555145.5
ENST00000556199.1
ENST00000556714.5
ENST00000556758.1
ENST00000556835.5
ENST00000556947.1
ENST00000649352.1
CDS CCA 90 bp ACCTCCTTAATCTTTCACTGTTCTTTTTGCCACTGGAAGAGCTGCTaGTGGAGCCTGTGCGATTCCGGTTTCCTCTGGAATCCCCATTGC +
Preference number: 5 (lower is better)
Translates to: TSLIFHCSFCHWKSC*WSLCDSGFLWNPHC
Trigger: GCAATGGGGATTCCAGAGGAAACCGGAATCGCACAGGCTCCACCAGCAGCTCTTCCAGTGGCAAAAAGAACAGTGAAAGATTAAGGAGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557741.1
CDS CCA 90 bp TCCCTTCACTTACTGTGCTCCAACCAGAGAACACAGAGAACACTTTaGGAGGCTGAGGTAGGCAGACTGCTTGAGCGCAGGAGTTTGATA +
Preference number: 5 (lower is better)
Translates to: SLHLLCSNQRTQRTL*EAEVGRLLERRSLI
Trigger: TATCAAACTCCTGCGCTCAAGCAGTCTGCCTACCTCAGCCTCCCAAAGTGTTCTCTGTGTTCTCTGGTTGGAGCACAGTAAGTGAAGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556947.1
ENST00000649352.1
CDS-3UTR CAA 90 bp CATATATTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGCGCCCGTCAGCTAGAGCTGATTaGAGCAGCTGGATGTCGTCT +
Preference number: 5 (lower is better)
Translates to: HILYNKSEHGTADPLWRPSARAD*SSWMSS
Trigger: AGACGACATCCAGCTGCTCAAATCAGCTCTAGCTGA...CGGGCGCCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp GTGACCAAGGGTAATGCGAGTCTGTGTCTTCCTTGCCCATGCTGCTCCCCACAGGCTGTAAGAATCCACTaGATCTTTGGGCATGTACAT +
Preference number: 5 (lower is better)
Translates to: VTKGNASLCLPCPCCSPQAVRIH*IFGHVH
Trigger: ATGTACATGCCCAAAGATCAAGTGGATTCTTACAGC...CTGTGGGGAGCAGCATGGGCAAGGAAGACACAGACTCGCATTACCCTTGGTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp AAGTCAGTTAGGAGTAGAGTCTGCTTAGCACAAGAGGGATACAAGCCCTCTCTCGGAAGCAAGTACAGGTaGTTACGGCAGTCTCGACCC +
Preference number: 5 (lower is better)
Translates to: KSVRSRVCLAQEGYKPSLGSKYR*LRQSRP
Trigger: GGGTCGAGACTGCCGTAACAACCTGTACTTGCTTCC...GAGAGAGGGCTTGTATCCCTCTTGTGCTAAGCAGACTCTACTCCTAACTGACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp GTGACCAAGGGTAATGCGAGTCTGTGTCTTCCTTGCCCATGCTGCTCCCCACAGCACAGAGGACAAACTTaGGCTTTTCTTGTTTCTCGA +
Preference number: 5 (lower is better)
Translates to: VTKGNASLCLPCPCCSPQHRGQT*AFLVSR
Trigger: TCGAGAAACAAGAAAAGCCAAAGTTTGTCCTCTGTG...CTGTGGGGAGCAGCATGGGCAAGGAAGACACAGACTCGCATTACCCTTGGTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp GAGCACTTGCCCACTCGCGTGTACTTCCTCCCGTTGTCACTAACGCCATATATACGTAGTCTCCGGAATTaGACACGAGGAACTGTGAGT +
Preference number: 5 (lower is better)
Translates to: EHLPTRVYFLPLSLTPYIRSLRN*TRGTVS
Trigger: ACTCACAGTTCCTCGTGTCAAATTCCGGAGACTACG...TATATATGGCGTTAGTGACAACGGGAGGAAGTACACGCGAGTGGGCAAGTGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557313.5
CDS-3UTR CAA 90 bp CTGTGTCATATATTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGGAGTCTGTGTCTTCCTaGCCCATGCTGCTCCCCACA +
Preference number: 5 (lower is better)
Translates to: LCHILYNKSEHGTADPLWESVSS*PMLLPT
Trigger: TGTGGGGAGCAGCATGGGCAAGGAAGACACAGACTC...CCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATGACACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp AAGTCAGTTAGGAGTAGAGTCTGCTTAGCACAAGAGGGATACAAGCCCTCTCTCGAAAAGCAGCTGCCCTaGGTACCTGGTGGAGCCTTT +
Preference number: 5 (lower is better)
Translates to: KSVRSRVCLAQEGYKPSLEKQLP*VPGGAF
Trigger: AAAGGCTCCACCAGGTACCAAGGGCAGCTGCTTTTC...GAGAGAGGGCTTGTATCCCTCTTGTGCTAAGCAGACTCTACTCCTAACTGACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS TCA 90 bp GTTTTCCATCCTTCGATGTGCCCGCAACTTGTCCTGTTGCTATCGTaGTCCGATCAGGATGAACTGCTAGGCACTTCACGTCATCGTTGT +
Preference number: 5 (lower is better)
Translates to: VFHPSMCPQLVLLLS*SDQDELLGTSRHRC
Trigger: ACAACGATGACGTGAAGTGCCTAGCAGTTCATCCTGATCGGATCACGATAGCAACAGGACAAGTTGCGGGCACATCGAAGGATGGAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000554479.5
ENST00000554553.5
ENST00000555277.1
ENST00000556714.5
ENST00000649352.1
CDS-3UTR CAA 90 bp TGTGAAGAGGCTGACCGCATCTGGTTAGGCAGGACGGTGTCACTGAAACTTGGAATCAGTGGTCTTGCTTaGGTAGGTCCTTTCCTGTTA +
Preference number: 5 (lower is better)
Translates to: CEEADRIWLGRTVSLKLGISGLA*VGPFLL
Trigger: TAACAGGAAAGGACCTACCAAAGCAAGACCACTGAT...TCCAAGTTTCAGTGACACCGTCCTGCCTAACCAGATGCGGTCAGCCTCTTCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp GCAGTTTCTTTCCTGACCCCGGAGGGGGATGGTAGAGAGCCAGTAGGTTTCTTTGAAGAGCTGGTCCTCTaGATGTTACTTTTGGTTGCT +
Preference number: 5 (lower is better)
Translates to: AVSFLTPEGDGREPVGFFEELVL*MLLLVA
Trigger: AGCAACCAAAAGTAACATCAAGAGGACCAGCTCTTC...AAAGAAACCTACTGGCTCTCTACCATCCCCCTCCGGGGTCAGGAAAGAAACTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000555096.5
CDS-3UTR CAA 90 bp AAGCGACTGCTTCATAGACATTTCCAACCAATACTTCCCAGCTTAACATGGTGGCCTCTGGAATCCCCATaGCTTTCCCTTCGACCCCCA +
Preference number: 5 (lower is better)
Translates to: KRLLHRHFQPILPSLTWWPLESP*LSLRPP
Trigger: TGGGGGTCGAAGGGAAAGCAATGGGGATTCCAGAGG...CCACCATGTTAAGCTGGGAAGTATTGGTTGGAAATGTCTATGAAGCAGTCGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557741.1
CDS-3UTR CAA 90 bp CAAGAAGGTGGCAAAATGTCTCACCGTGAATCAGGGCGTGTGAACAAGGGATGGCTGAATACAGGCTCCTaGGGTTTGCTTTCACTGTTC +
Preference number: 5 (lower is better)
Translates to: QEGGKMSHRESGRVNKGWLNTGS*GLLSLF
Trigger: GAACAGTGAAAGCAAACCCAAGGAGCCTGTATTCAG...CCATCCCTTGTTCACACGCCCTGATTCACGGTGAGACATTTTGCCACCTTCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp CTGTGTCATATATTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGGGAAGCAAGTACAGGTaGTTACGGCAGTCTCGACCC +
Preference number: 5 (lower is better)
Translates to: LCHILYNKSEHGTADPLWGSKYR*LRQSRP
Trigger: GGGTCGAGACTGCCGTAACAACCTGTACTTGCTTCC...CCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATGACACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp GATTTTCCACAAGTAACTATGATGTTGGTGTCCGTGGGGTGGAAATCCGCAGCACGATGTGCCCGCAACTaGTCCTGTTGCTATCGTGAT +
Preference number: 5 (lower is better)
Translates to: DFPQVTMMLVSVGWKSAARCARN*SCCYRD
Trigger: ATCACGATAGCAACAGGACAAGTTGCGGGCACATCG...TGCTGCGGATTTCCACCCCACGGACACCAACATCATAGTTACTTGTGGAAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554553.5
CDS-3UTR CAA 90 bp GTGACCAAGGGTAATGCGAGTCTGTGTCTTCCTTGCCCATGCTGCTCCCCACAGCGTTTTACGAAGTTTTaGATAGTTTCCGCTCCAAGA +
Preference number: 5 (lower is better)
Translates to: VTKGNASLCLPCPCCSPQRFTKF*IVSAPR
Trigger: TCTTGGAGCGGAAACTATCAAAAACTTCGTAAAACG...CTGTGGGGAGCAGCATGGGCAAGGAAGACACAGACTCGCATTACCCTTGGTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp AGGCAGAGGGAACCCAGTAGAGGATTTCGTAGTCTCCGGAATTTGACACGAGGATCAAGAACTGAGATTTaGAGGCATGGATGGCCAGTC +
Preference number: 5 (lower is better)
Translates to: RQREPSRGFRSLRNLTRGSRTEI*RHGWPV
Trigger: GACTGGCCATCCATGCCTCAAAATCTCAGTTCTTGA...TCCTCGTGTCAAATTCCGGAGACTACGAAATCCTCTACTGGGTTCCCTCTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557313.5
CDS-3UTR CAA 90 bp GACAAATTTCTGCCACCTCCGTTTAACGCATCAGAACTCAATCTTATCTCATACGCCCGACAGACGGCATaGATGTCGGTTCCGTCCGAG +
Preference number: 5 (lower is better)
Translates to: DKFLPPPFNASELNLISYARQTA*MSVPSE
Trigger: CTCGGACGGAACCGACATCAATGCCGTCTGTCGGGC...GTATGAGATAAGATTGAGTTCTGATGCGTTAAACGGAGGTGGCAGAAATTTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp CAATGTGCACTGTGTCATATATTGTACAACAAAAGTGAACACGGAACCGCTGATGCCCGACAGACGGCATaGATGTCGGTTCCGTCCGAG +
Preference number: 5 (lower is better)
Translates to: QCALCHILYNKSEHGTADARQTA*MSVPSE
Trigger: CTCGGACGGAACCGACATCAATGCCGTCTGTCGGGC...ATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATGACACAGTGCACATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp CATATATTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGCGCCCGCAAAGTCGTCGCCTGTaGACAGGAGTTTCTTCTCAT +
Preference number: 5 (lower is better)
Translates to: HILYNKSEHGTADPLWRPQSRRL*TGVSSH
Trigger: ATGAGAAGAAACTCCTGTCAACAGGCGACGACTTTG...CGGGCGCCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp CTGCCACCTCCGTTTAACGCATCAGAACTCAATCTTATCTCATACTGTAATGGGGAGTCTGTGTCTTCCTaGCCCATGCTGCTCCCCACA +
Preference number: 5 (lower is better)
Translates to: LPPPFNASELNLISYCNGESVSS*PMLLPT
Trigger: TGTGGGGAGCAGCATGGGCAAGGAAGACACAGACTC...CCCATTACAGTATGAGATAAGATTGAGTTCTGATGCGTTAAACGGAGGTGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp CTGTGTCATATATTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGGAAAAGCAGCTGCCCTaGGTACCTGGTGGAGCCTTT +
Preference number: 5 (lower is better)
Translates to: LCHILYNKSEHGTADPLWEKQLP*VPGGAF
Trigger: AAAGGCTCCACCAGGTACCAAGGGCAGCTGCTTTTC...CCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATGACACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp TCCCAGCTTAACATGGTGGAAGGAGCACAGATTTTGAGGCCAGCTGGATCCGTGTGCTGGAGACTTTATTaGGGACAAAAGCGACTGCTT +
Preference number: 5 (lower is better)
Translates to: SQLNMVEGAQILRPAGSVCWRLY*GQKRLL
Trigger: AAGCAGTCGCTTTTGTCCCAAATAAAGTCTCCAGCA...CACGGATCCAGCTGGCCTCAAAATCTGTGCTCCTTCCACCATGTTAAGCTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557741.1
CDS GCA 90 bp CTCCCGACACCAGTGTGCCATCTCTTAACATACAAAGTGCAAAAATaGCACCCTCATGGGCCCCCTGAACTGCATAGCTTATTCGATTTG +
Preference number: 5 (lower is better)
Translates to: LPTPVCHLLTYKVQK*HPHGPPELHSLFDL
Trigger: CAAATCGAATAAGCTATGCAGTTCAGGGGGCCCATGAGGGTGGCATTTTTGCACTTTGTATGTTAAGAGATGGCACACTGGTGTCGGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000554111.1
ENST00000554386.1
ENST00000649352.1
CDS GCA 90 bp TTAACCTCCTTAATCTTTCACTGTTCTTTTTGCCACTGGAAGAGCTaGTGGTGGAGCCTGTGCGATTCCGGTTTCCTCTGGAATCCCCAT +
Preference number: 5 (lower is better)
Translates to: LTSLIFHCSFCHWKS*WWSLCDSGFLWNPH
Trigger: ATGGGGATTCCAGAGGAAACCGGAATCGCACAGGCTCCACCAGCAGCTCTTCCAGTGGCAAAAAGAACAGTGAAAGATTAAGGAGGTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557741.1
CDS CCA 90 bp TCCTTAATCTTTCACTGTTCTTTTTGCCACTGGAAGAGCTGCTGGTaGAGCCTGTGCGATTCCGGTTTCCTCTGGAATCCCCATTGCTTT +
Preference number: 5 (lower is better)
Translates to: SLIFHCSFCHWKSCW*SLCDSGFLWNPHCF
Trigger: AAAGCAATGGGGATTCCAGAGGAAACCGGAATCGCACAGGCTCCACCAGCAGCTCTTCCAGTGGCAAAAAGAACAGTGAAAGATTAAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557741.1
CDS-3UTR CAA 90 bp CATATATTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGCGCCCGATCAGTGGTCTTGCTTaGGTAGGTCCTTTCCTGTTA +
Preference number: 5 (lower is better)
Translates to: HILYNKSEHGTADPLWRPISGLA*VGPFLL
Trigger: TAACAGGAAAGGACCTACCAAAGCAAGACCACTGAT...CGGGCGCCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp TCAGAACTCAATCTTATCTCATACTGTAATGGGTCGCCCATGCACAAAAGACAGCCTCTGGAATCCCCATaGCTTTCCCTTCGACCCCCA +
Preference number: 5 (lower is better)
Translates to: SELNLISYCNGSPMHKRQPLESP*LSLRPP
Trigger: TGGGGGTCGAAGGGAAAGCAATGGGGATTCCAGAGG...CTGTCTTTTGTGCATGGGCGACCCATTACAGTATGAGATAAGATTGAGTTCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp CATATATTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGCGCCCGACAGGCTCCTTGGGTTaGCTTTCACTGTTCTTTTTG +
Preference number: 5 (lower is better)
Translates to: HILYNKSEHGTADPLWRPTGSLG*LSLFFL
Trigger: CAAAAAGAACAGTGAAAGCAAACCCAAGGAGCCTGT...CGGGCGCCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp CTGTGTCATATATTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGCGATGTGCCCGCAACTaGTCCTGTTGCTATCGTGAT +
Preference number: 5 (lower is better)
Translates to: LCHILYNKSEHGTADPLWRCARN*SCCYRD
Trigger: ATCACGATAGCAACAGGACAAGTTGCGGGCACATCG...CCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATGACACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp TGTGAAGAGGCTGACCGCATCTGGTTAGGCAGGACGGTGTCACTGAAACTTGGACACAGAGGACAAACTTaGGCTTTTCTTGTTTCTCGA +
Preference number: 5 (lower is better)
Translates to: CEEADRIWLGRTVSLKLGHRGQT*AFLVSR
Trigger: TCGAGAAACAAGAAAAGCCAAAGTTTGTCCTCTGTG...TCCAAGTTTCAGTGACACCGTCCTGCCTAACCAGATGCGGTCAGCCTCTTCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp TTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGCGCCCGCTGACACGTTTTACGAAGTTTTaGATAGTTTCCGCTCCAAGA +
Preference number: 5 (lower is better)
Translates to: LYNKSEHGTADPLWRPLTRFTKF*IVSAPR
Trigger: TCTTGGAGCGGAAACTATCAAAAACTTCGTAAAACG...TGTCAGCGGGCGCCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp TCCCAAAGTGCAGGTATAGGTAGCCCATTCAATGTCTCTTGTAGTTTCCACACTCAGAGAGTGGCATGCTaGTCATGCCCACAGGTCAAG +
Preference number: 5 (lower is better)
Translates to: SQSAGIGSPFNVSCSFHTQRVAC*SCPQVK
Trigger: CTTGACCTGTGGGCATGACAAGCATGCCACTCTCTG...AGTGTGGAAACTACAAGAGACATTGAATGGGCTACCTATACCTGCACTTTGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557313.5
CDS-3UTR CAA 90 bp AAGTCAGTTAGGAGTAGAGTCTGCTTAGCACAAGAGGGATACAAGCCCTCTCTCTTCCACACTTACGACTaGCTTACAGGCAGAGGGAAC +
Preference number: 5 (lower is better)
Translates to: KSVRSRVCLAQEGYKPSLFHTYD*LTGRGN
Trigger: GTTCCCTCTGCCTGTAAGCAAGTCGTAAGTGTGGAA...GAGAGAGGGCTTGTATCCCTCTTGTGCTAAGCAGACTCTACTCCTAACTGACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS TCA 90 bp GAATCTCCGTTTTACGAAGTTTTTGATAGTTTCCGCTCCAAGAAATaGGCTTTCGGTCTTTCCCACCTCCCGACACCAGTGTGCCATCTC +
Preference number: 5 (lower is better)
Translates to: ESPFYEVFDSFRSKK*AFGLSHLPTPVCHL
Trigger: GAGATGGCACACTGGTGTCGGGAGGTGGGAAAGACCGAAAGCTCATTTCTTGGAGCGGAAACTATCAAAAACTTCGTAAAACGGAGATTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000554111.1
ENST00000649352.1
CDS TCA 90 bp CACAAACCACCTCCCAGTGAGTGTTCCGACTGCAACCACAGACCCTaGAGGATGAAAACCAGAAGACTGAGCTGGATCCTCTATTATTTT +
Preference number: 5 (lower is better)
Translates to: HKPPPSECSDCNHRP*RMKTRRLSWILYYF
Trigger: AAAATAATAGAGGATCCAGCTCAGTCTTCTGGTTTTCATCCTTCAGGGTCTGTGGTTGCAGTCGGAACACTCACTGGGAGGTGGTTTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp GACAAATTTCTGCCACCTCCGTTTAACGCATCAGAACTCAATCTTATCTCATACCCTCTGGAATCCCCATaGCTTTCCCTTCGACCCCCA +
Preference number: 5 (lower is better)
Translates to: DKFLPPPFNASELNLISYPLESP*LSLRPP
Trigger: TGGGGGTCGAAGGGAAAGCAATGGGGATTCCAGAGG...GTATGAGATAAGATTGAGTTCTGATGCGTTAAACGGAGGTGGCAGAAATTTGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp CATATATTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGCGCCCGTCCACAGCACAGAGATaGGTTCCTCCATTAGATTTT +
Preference number: 5 (lower is better)
Translates to: HILYNKSEHGTADPLWRPSTAQR*VPPLDF
Trigger: AAAATCTAATGGAGGAACCAATCTCTGTGCTGTGGA...CGGGCGCCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp AAGTCAGTTAGGAGTAGAGTCTGCTTAGCACAAGAGGGATACAAGCCCTCTCTCTCAAGAACTGAGATTTaGAGGCATGGATGGCCAGTC +
Preference number: 5 (lower is better)
Translates to: KSVRSRVCLAQEGYKPSLSRTEI*RHGWPV
Trigger: GACTGGCCATCCATGCCTCAAAATCTCAGTTCTTGA...GAGAGAGGGCTTGTATCCCTCTTGTGCTAAGCAGACTCTACTCCTAACTGACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp CTGTGTCATATATTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGTTCCACACTTACGACTaGCTTACAGGCAGAGGGAAC +
Preference number: 5 (lower is better)
Translates to: LCHILYNKSEHGTADPLWFHTYD*LTGRGN
Trigger: GTTCCCTCTGCCTGTAAGCAAGTCGTAAGTGTGGAA...CCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATGACACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp AAGTCAGTTAGGAGTAGAGTCTGCTTAGCACAAGAGGGATACAAGCCCTCTCTCCAAAGTCGTCGCCTGTaGACAGGAGTTTCTTCTCAT +
Preference number: 5 (lower is better)
Translates to: KSVRSRVCLAQEGYKPSLQSRRL*TGVSSH
Trigger: ATGAGAAGAAACTCCTGTCAACAGGCGACGACTTTG...GAGAGAGGGCTTGTATCCCTCTTGTGCTAAGCAGACTCTACTCCTAACTGACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp CATATATTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGCGCCCGAACGTTGCAACCTTGTaGGTATTCAATGTGCACTGT +
Preference number: 5 (lower is better)
Translates to: HILYNKSEHGTADPLWRPNVATL*VFNVHC
Trigger: ACAGTGCACATTGAATACCAACAAGGTTGCAACGTT...CGGGCGCCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp CATATATTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGCGCCCGGTAAACGTTGCAACCTaGTTGGTATTCAATGTGCAC +
Preference number: 5 (lower is better)
Translates to: HILYNKSEHGTADPLWRPVNVAT*LVFNVH
Trigger: GTGCACATTGAATACCAACAAGGTTGCAACGTTTAC...CGGGCGCCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp CATATATTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGCGCCCGGTGTGTTTGTATCCTTaGTCCATTATTGAGCTTGGC +
Preference number: 5 (lower is better)
Translates to: HILYNKSEHGTADPLWRPVCLYP*SIIELG
Trigger: GCCAAGCTCAATAATGGACAAAGGATACAAACACAC...CGGGCGCCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262233.11
ENST00000649352.1
CDS-3UTR CAA 90 bp CAAGAAGGTGGCAAAATGTCTCACCGTGAATCAGGGCGTGTGAACAAGGGATGGGATCTGTTTAATCTTTaGGTTGCTGGCACAGCAGTT +
Preference number: 5 (lower is better)
Translates to: QEGGKMSHRESGRVNKGWDLFNL*VAGTAV
Trigger: AACTGCTGTGCCAGCAACCAAAAGATTAAACAGATC...CCATCCCTTGTTCACACGCCCTGATTCACGGTGAGACATTTTGCCACCTTCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp TTCTTTGGTAACACAGTGCCATTGTTGACCGTGGTTCTTAAAGGCAGGGTCTGCCTGCATCAGTGGTCTTaGGTAGGTCCTTTCCTGTTA +
Preference number: 5 (lower is better)
Translates to: FFGNTVPLLTVVLKGRVCLHQWS*VGPFLL
Trigger: TAACAGGAAAGGACCTACCAAAGACCACTGATGCAG...GCAGACCCTGCCTTTAAGAACCACGGTCAACAATGGCACTGTGTTACCAAAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555096.5
CDS CCA 90 bp TCGACCCCTGTACCCATAGACCCATTCCAGCTTGAGTCTCTTGGTTaGAAGTTCTACTTTTGCTTCCAAGCTGTAAGAATCCACTTGATC +
Preference number: 5 (lower is better)
Translates to: STPVPIDPFQLESLG*KFYFCFQAVRIHLI
Trigger: GATCAAGTGGATTCTTACAGCTTGGAAGCAAAAGTAGAACTTCCAACCAAGAGACTCAAGCTGGAATGGGTCTATGGGTACAGGGGTCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000554479.5
ENST00000555277.1
ENST00000556714.5
ENST00000649352.1
CDS-3UTR CAA 90 bp AGAGCTGGTCCTCTTGATGTTACTTTTGGTTGCTGGCACAGCAGTTTCTTTCCTAACACAGTGCCATTGTaGACCGTGGTTCTTAAAGGC +
Preference number: 5 (lower is better)
Translates to: RAGPLDVTFGCWHSSFFPNTVPL*TVVLKG
Trigger: GCCTTTAAGAACCACGGTCAACAATGGCACTGTGTT...AGGAAAGAAACTGCTGTGCCAGCAACCAAAAGTAACATCAAGAGGACCAGCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555096.5
CDS-3UTR CAA 90 bp AAGTCAGTTAGGAGTAGAGTCTGCTTAGCACAAGAGGGATACAAGCCCTCTCTCGGTAACACAGTGCCATaGTTGACCGTGGTTCTTAAA +
Preference number: 5 (lower is better)
Translates to: KSVRSRVCLAQEGYKPSLGNTVP*LTVVLK
Trigger: TTTAAGAACCACGGTCAACAATGGCACTGTGTTACC...GAGAGAGGGCTTGTATCCCTCTTGTGCTAAGCAGACTCTACTCCTAACTGACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp GGTTTCTTTGGTAACACAGTGCCATTGTTGACCGTGGTTCTTAAAGGCAGGGTCGGTAACACAGTGCCATaGTTGACCGTGGTTCTTAAA +
Preference number: 5 (lower is better)
Translates to: GFFGNTVPLLTVVLKGRVGNTVP*LTVVLK
Trigger: TTTAAGAACCACGGTCAACAATGGCACTGTGTTACC...GACCCTGCCTTTAAGAACCACGGTCAACAATGGCACTGTGTTACCAAAGAAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555096.5
CDS-3UTR CAA 90 bp CTGTGTCATATATTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGCTTTCACTGTTCTTTTaGCCACTGGAAGAGCTGCTG +
Preference number: 5 (lower is better)
Translates to: LCHILYNKSEHGTADPLWLSLFF*PLEELL
Trigger: CAGCAGCTCTTCCAGTGGCAAAAAGAACAGTGAAAG...CCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATGACACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp AGCCTCCCCAAGGGAGAATGCAATGAAACTTTGGAAAATGTAACCAAACACAGTCGATGTGCCCGCAACTaGTCCTGTTGCTATCGTGAT +
Preference number: 5 (lower is better)
Translates to: SLPKGECNETLENVTKHSRCARN*SCCYRD
Trigger: ATCACGATAGCAACAGGACAAGTTGCGGGCACATCG...ACTGTGTTTGGTTACATTTTCCAAAGTTTCATTGCATTCTCCCTTGGGGAGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp AACTTGGAAACGCCTGTGTACCCTGCTGAAATATTGAAGTCAGTTAGGAGTAGACGATGTGCCCGCAACTaGTCCTGTTGCTATCGTGAT +
Preference number: 5 (lower is better)
Translates to: NLETPVYPAEILKSVRSRRCARN*SCCYRD
Trigger: ATCACGATAGCAACAGGACAAGTTGCGGGCACATCG...TCTACTCCTAACTGACTTCAATATTTCAGCAGGGTACACAGGCGTTTCCAAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp CTGTGTCATATATTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGCAAGTAACTATGATGTaGGTGTCCGTGGGGTGGAAA +
Preference number: 5 (lower is better)
Translates to: LCHILYNKSEHGTADPLWQVTMM*VSVGWK
Trigger: TTTCCACCCCACGGACACCAACATCATAGTTACTTG...CCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATGACACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp CATATATTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGCGCCCGCGTTTTACGAAGTTTTaGATAGTTTCCGCTCCAAGA +
Preference number: 5 (lower is better)
Translates to: HILYNKSEHGTADPLWRPRFTKF*IVSAPR
Trigger: TCTTGGAGCGGAAACTATCAAAAACTTCGTAAAACG...CGGGCGCCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp CAATGTGCACTGTGTCATATATTGTACAACAAAAGTGAACACGGAACCGCTGATCAGAGAGTGGCATGCTaGTCATGCCCACAGGTCAAG +
Preference number: 5 (lower is better)
Translates to: QCALCHILYNKSEHGTADQRVAC*SCPQVK
Trigger: CTTGACCTGTGGGCATGACAAGCATGCCACTCTCTG...ATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATGACACAGTGCACATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp AACTTGGAAACGCCTGTGTACCCTGCTGAAATATTGAAGTCAGTTAGGAGTAGAGAGAAGAGGTGCACTTaGCCAAAGTCGTCGCCTGTT +
Preference number: 5 (lower is better)
Translates to: NLETPVYPAEILKSVRSREKRCT*PKSSPV
Trigger: AACAGGCGACGACTTTGGCAAAGTGCACCTCTTCTC...TCTACTCCTAACTGACTTCAATATTTCAGCAGGGTACACAGGCGTTTCCAAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp AATATCATCTCATGCCAAGTAATATACACAAGAAGGTGGCAAAATGTCTCACCGGAGTCTGTGTCTTCCTaGCCCATGCTGCTCCCCACA +
Preference number: 5 (lower is better)
Translates to: NIISCQVIYTRRWQNVSPESVSS*PMLLPT
Trigger: TGTGGGGAGCAGCATGGGCAAGGAAGACACAGACTC...CGGTGAGACATTTTGCCACCTTCTTGTGTATATTACTTGGCATGAGATGATATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp AAGTCAGTTAGGAGTAGAGTCTGCTTAGCACAAGAGGGATACAAGCCCTCTCTCATGGATAAGGCCTTCTaGACAAATTTCTGCCACCTC +
Preference number: 5 (lower is better)
Translates to: KSVRSRVCLAQEGYKPSLMDKAF*TNFCHL
Trigger: GAGGTGGCAGAAATTTGTCAAGAAGGCCTTATCCAT...GAGAGAGGGCTTGTATCCCTCTTGTGCTAAGCAGACTCTACTCCTAACTGACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp AACTTGGAAACGCCTGTGTACCCTGCTGAAATATTGAAGTCAGTTAGGAGTAGATCAGCTAGAGCTGATTaGAGCAGCTGGATGTCGTCT +
Preference number: 5 (lower is better)
Translates to: NLETPVYPAEILKSVRSRSARAD*SSWMSS
Trigger: AGACGACATCCAGCTGCTCAAATCAGCTCTAGCTGA...TCTACTCCTAACTGACTTCAATATTTCAGCAGGGTACACAGGCGTTTCCAAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp CAAGAAGGTGGCAAAATGTCTCACCGTGAATCAGGGCGTGTGAACAAGGGATGGTTGGAAGTTCTACTTTaGCTTCCAAGCTGTAAGAAT +
Preference number: 5 (lower is better)
Translates to: QEGGKMSHRESGRVNKGWLEVLL*LPSCKN
Trigger: ATTCTTACAGCTTGGAAGCAAAAGTAGAACTTCCAA...CCATCCCTTGTTCACACGCCCTGATTCACGGTGAGACATTTTGCCACCTTCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp CATATATTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGCGCCCGTTGGAAGTTCTACTTTaGCTTCCAAGCTGTAAGAAT +
Preference number: 5 (lower is better)
Translates to: HILYNKSEHGTADPLWRPLEVLL*LPSCKN
Trigger: ATTCTTACAGCTTGGAAGCAAAAGTAGAACTTCCAA...CGGGCGCCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp AATATCATCTCATGCCAAGTAATATACACAAGAAGGTGGCAAAATGTCTCACCGGGAAGCAAGTACAGGTaGTTACGGCAGTCTCGACCC +
Preference number: 5 (lower is better)
Translates to: NIISCQVIYTRRWQNVSPGSKYR*LRQSRP
Trigger: GGGTCGAGACTGCCGTAACAACCTGTACTTGCTTCC...CGGTGAGACATTTTGCCACCTTCTTGTGTATATTACTTGGCATGAGATGATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp AATTTCTGCCACCTCCGTTTAACGCATCAGAACTCAATCTTATCTCATACTGTAGGAAGCAAGTACAGGTaGTTACGGCAGTCTCGACCC +
Preference number: 5 (lower is better)
Translates to: NFCHLRLTHQNSILSHTVGSKYR*LRQSRP
Trigger: GGGTCGAGACTGCCGTAACAACCTGTACTTGCTTCC...TACAGTATGAGATAAGATTGAGTTCTGATGCGTTAAACGGAGGTGGCAGAAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp AGTCTCATCTGCAAACTACAGTCTCATCTGCAAATGGCCCAGGTGAGAATAAAAAGTTGCTCCTCCACGTaGTATAACACCACCACGGAT +
Preference number: 5 (lower is better)
Translates to: SLICKLQSHLQMAQVRIKSCSST*YNTTTD
Trigger: ATCCGTGGTGGTGTTATACAACGTGGAGGAGCAACT...TTTTATTCTCACCTGGGCCATTTGCAGATGAGACTGTAGTTTGCAGATGAGACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262233.11
ENST00000649352.1
CDS-3UTR CAA 90 bp TATGATGTTGGTGTCCGTGGGGTGGAAATCCGCAGCAAACACAGCTTCATTAGATCCACAGCACAGAGATaGGTTCCTCCATTAGATTTT +
Preference number: 5 (lower is better)
Translates to: YDVGVRGVEIRSKHSFIRSTAQR*VPPLDF
Trigger: AAAATCTAATGGAGGAACCAATCTCTGTGCTGTGGA...TCTAATGAAGCTGTGTTTGCTGCGGATTTCCACCCCACGGACACCAACATCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554553.5
CDS-3UTR CAA 90 bp CTGCCACCTCCGTTTAACGCATCAGAACTCAATCTTATCTCATACTGTAATGGGCAAGTAACTATGATGTaGGTGTCCGTGGGGTGGAAA +
Preference number: 5 (lower is better)
Translates to: LPPPFNASELNLISYCNGQVTMM*VSVGWK
Trigger: TTTCCACCCCACGGACACCAACATCATAGTTACTTG...CCCATTACAGTATGAGATAAGATTGAGTTCTGATGCGTTAAACGGAGGTGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp TTGCCACTTGAATCTCCAGTAATGGTGTCACCGTTTTCAGAGAAAGTCACACAGCAAGTAACTATGATGTaGGTGTCCGTGGGGTGGAAA +
Preference number: 5 (lower is better)
Translates to: LPLESPVMVSPFSEKVTQQVTMM*VSVGWK
Trigger: TTTCCACCCCACGGACACCAACATCATAGTTACTTG...CTGTGTGACTTTCTCTGAAAACGGTGACACCATTACTGGAGATTCAAGTGGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554553.5
CDS-3UTR CAA 90 bp TATGATGTTGGTGTCCGTGGGGTGGAAATCCGCAGCAAACACAGCTTCATTAGACACAGAGGACAAACTTaGGCTTTTCTTGTTTCTCGA +
Preference number: 5 (lower is better)
Translates to: YDVGVRGVEIRSKHSFIRHRGQT*AFLVSR
Trigger: TCGAGAAACAAGAAAAGCCAAAGTTTGTCCTCTGTG...TCTAATGAAGCTGTGTTTGCTGCGGATTTCCACCCCACGGACACCAACATCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554553.5
CDS-3UTR CAA 90 bp CATATATTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGCGCCCGCATAGCTTATTCGATTaGTACCTTTTCCCCATACTA +
Preference number: 5 (lower is better)
Translates to: HILYNKSEHGTADPLWRPHSLFD*YLFPIL
Trigger: TAGTATGGGGAAAAGGTACAAATCGAATAAGCTATG...CGGGCGCCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp AATTTCTGCCACCTCCGTTTAACGCATCAGAACTCAATCTTATCTCATACTGTACAGAGAGTGGCATGCTaGTCATGCCCACAGGTCAAG +
Preference number: 5 (lower is better)
Translates to: NFCHLRLTHQNSILSHTVQRVAC*SCPQVK
Trigger: CTTGACCTGTGGGCATGACAAGCATGCCACTCTCTG...TACAGTATGAGATAAGATTGAGTTCTGATGCGTTAAACGGAGGTGGCAGAAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp AACTTGGAAACGCCTGTGTACCCTGCTGAAATATTGAAGTCAGTTAGGAGTAGACGTAGTCTCCGGAATTaGACACGAGGAACTGTGAGT +
Preference number: 5 (lower is better)
Translates to: NLETPVYPAEILKSVRSRRSLRN*TRGTVS
Trigger: ACTCACAGTTCCTCGTGTCAAATTCCGGAGACTACG...TCTACTCCTAACTGACTTCAATATTTCAGCAGGGTACACAGGCGTTTCCAAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp AACTTGGAAACGCCTGTGTACCCTGCTGAAATATTGAAGTCAGTTAGGAGTAGATTCCACACTTACGACTaGCTTACAGGCAGAGGGAAC +
Preference number: 5 (lower is better)
Translates to: NLETPVYPAEILKSVRSRFHTYD*LTGRGN
Trigger: GTTCCCTCTGCCTGTAAGCAAGTCGTAAGTGTGGAA...TCTACTCCTAACTGACTTCAATATTTCAGCAGGGTACACAGGCGTTTCCAAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp TTAAACAAAACAGAAATCACAGTGACCAAGGGTAATGCGAGTCTGTGTCTTCCTGAGAAGAGGTGCACTTaGCCAAAGTCGTCGCCTGTT +
Preference number: 5 (lower is better)
Translates to: LNKTEITVTKGNASLCLPEKRCT*PKSSPV
Trigger: AACAGGCGACGACTTTGGCAAAGTGCACCTCTTCTC...AGGAAGACACAGACTCGCATTACCCTTGGTCACTGTGATTTCTGTTTTGTTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp CAAGAAGGTGGCAAAATGTCTCACCGTGAATCAGGGCGTGTGAACAAGGGATGGGCACTGTGTCATATATaGTACAACAAAAGTGAACAC +
Preference number: 5 (lower is better)
Translates to: QEGGKMSHRESGRVNKGWALCHI*YNKSEH
Trigger: GTGTTCACTTTTGTTGTACAATATATGACACAGTGC...CCATCCCTTGTTCACACGCCCTGATTCACGGTGAGACATTTTGCCACCTTCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp CATATATTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGCGCCCGAGAGATCTTTCTGACTaGGTCTACTTGGTCATAAAA +
Preference number: 5 (lower is better)
Translates to: HILYNKSEHGTADPLWRPRDLSD*VYLVIK
Trigger: TTTTATGACCAAGTAGACCAAGTCAGAAAGATCTCT...CGGGCGCCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp AATATCATCTCATGCCAAGTAATATACACAAGAAGGTGGCAAAATGTCTCACCGCTGGATGTCGTCTTCTaGCATCTGGACTCTCTGCTC +
Preference number: 5 (lower is better)
Translates to: NIISCQVIYTRRWQNVSPLDVVF*HLDSLL
Trigger: GAGCAGAGAGTCCAGATGCAAGAAGACGACATCCAG...CGGTGAGACATTTTGCCACCTTCTTGTGTATATTACTTGGCATGAGATGATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp CTGCTTCATAGACATTTCCAACCAATACTTCCCAGCTTAACATGGTGGAAGGAGCTCTTGATGTTACTTTaGGTTGCTGGCACAGCAGTT +
Preference number: 5 (lower is better)
Translates to: LLHRHFQPILPSLTWWKELLMLL*VAGTAV
Trigger: AACTGCTGTGCCAGCAACCAAAAGTAACATCAAGAG...CTCCTTCCACCATGTTAAGCTGGGAAGTATTGGTTGGAAATGTCTATGAAGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557741.1
CDS-3UTR CAA 90 bp CTGCCACCTCCGTTTAACGCATCAGAACTCAATCTTATCTCATACTGTAATGGGGAAGAGCTGGTCCTCTaGATGTTACTTTTGGTTGCT +
Preference number: 5 (lower is better)
Translates to: LPPPFNASELNLISYCNGEELVL*MLLLVA
Trigger: AGCAACCAAAAGTAACATCAAGAGGACCAGCTCTTC...CCCATTACAGTATGAGATAAGATTGAGTTCTGATGCGTTAAACGGAGGTGGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262233.11
CDS-3UTR CAA 90 bp AACTTGGAAACGCCTGTGTACCCTGCTGAAATATTGAAGTCAGTTAGGAGTAGACTTTCACTGTTCTTTTaGCCACTGGAAGAGCTGCTG +
Preference number: 5 (lower is better)
Translates to: NLETPVYPAEILKSVRSRLSLFF*PLEELL
Trigger: CAGCAGCTCTTCCAGTGGCAAAAAGAACAGTGAAAG...TCTACTCCTAACTGACTTCAATATTTCAGCAGGGTACACAGGCGTTTCCAAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp GAAGTTGCTGGAGACTTTATTTGGGACAAAAGCGACTGCTTCATAGACATTTCCCTTTCACTGTTCTTTTaGCCACTGGAAGAGCTGCTG +
Preference number: 5 (lower is better)
Translates to: EVAGDFIWDKSDCFIDISLSLFF*PLEELL
Trigger: CAGCAGCTCTTCCAGTGGCAAAAAGAACAGTGAAAG...GGAAATGTCTATGAAGCAGTCGCTTTTGTCCCAAATAAAGTCTCCAGCAACTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557741.1
CDS-3UTR CAA 90 bp CTGCCACCTCCGTTTAACGCATCAGAACTCAATCTTATCTCATACTGTAATGGGACAGGCTCCTTGGGTTaGCTTTCACTGTTCTTTTTG +
Preference number: 5 (lower is better)
Translates to: LPPPFNASELNLISYCNGTGSLG*LSLFFL
Trigger: CAAAAAGAACAGTGAAAGCAAACCCAAGGAGCCTGT...CCCATTACAGTATGAGATAAGATTGAGTTCTGATGCGTTAAACGGAGGTGGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp TTAAACAAAACAGAAATCACAGTGACCAAGGGTAATGCGAGTCTGTGTCTTCCTAGTTGCTCCTCCACGTaGTATAACACCACCACGGAT +
Preference number: 5 (lower is better)
Translates to: LNKTEITVTKGNASLCLPSCSST*YNTTTD
Trigger: ATCCGTGGTGGTGTTATACAACGTGGAGGAGCAACT...AGGAAGACACAGACTCGCATTACCCTTGGTCACTGTGATTTCTGTTTTGTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp TCAGAACTCAATCTTATCTCATACTGTAATGGGTCGCCCATGCACAAAAGACAGCAAGTAACTATGATGTaGGTGTCCGTGGGGTGGAAA +
Preference number: 5 (lower is better)
Translates to: SELNLISYCNGSPMHKRQQVTMM*VSVGWK
Trigger: TTTCCACCCCACGGACACCAACATCATAGTTACTTG...CTGTCTTTTGTGCATGGGCGACCCATTACAGTATGAGATAAGATTGAGTTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp AACTTGGAAACGCCTGTGTACCCTGCTGAAATATTGAAGTCAGTTAGGAGTAGACAAGTAACTATGATGTaGGTGTCCGTGGGGTGGAAA +
Preference number: 5 (lower is better)
Translates to: NLETPVYPAEILKSVRSRQVTMM*VSVGWK
Trigger: TTTCCACCCCACGGACACCAACATCATAGTTACTTG...TCTACTCCTAACTGACTTCAATATTTCAGCAGGGTACACAGGCGTTTCCAAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp CTGTGTCATATATTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGCACAGAGGACAAACTTaGGCTTTTCTTGTTTCTCGA +
Preference number: 5 (lower is better)
Translates to: LCHILYNKSEHGTADPLWHRGQT*AFLVSR
Trigger: TCGAGAAACAAGAAAAGCCAAAGTTTGTCCTCTGTG...CCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATGACACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp CTGTGTCATATATTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGGGACAAAGTTTCGAGTaGTGCCAATCAAGATCACAT +
Preference number: 5 (lower is better)
Translates to: LCHILYNKSEHGTADPLWGQSFE*CQSRSH
Trigger: ATGTGATCTTGATTGGCACAACTCGAAACTTTGTCC...CCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATGACACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp AACTTGGAAACGCCTGTGTACCCTGCTGAAATATTGAAGTCAGTTAGGAGTAGATCAAGAACTGAGATTTaGAGGCATGGATGGCCAGTC +
Preference number: 5 (lower is better)
Translates to: NLETPVYPAEILKSVRSRSRTEI*RHGWPV
Trigger: GACTGGCCATCCATGCCTCAAAATCTCAGTTCTTGA...TCTACTCCTAACTGACTTCAATATTTCAGCAGGGTACACAGGCGTTTCCAAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp TCCCAAAGTGCAGGTATAGGTAGCCCATTCAATGTCTCTTGTAGTTTCCACACTGTGTACTTCCTCCCGTaGTCACTAACGCCATATATA +
Preference number: 5 (lower is better)
Translates to: SQSAGIGSPFNVSCSFHTVYFLP*SLTPYI
Trigger: TATATATGGCGTTAGTGACAACGGGAGGAAGTACAC...AGTGTGGAAACTACAAGAGACATTGAATGGGCTACCTATACCTGCACTTTGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557313.5
CDS-3UTR CAA 90 bp TTAAACAAAACAGAAATCACAGTGACCAAGGGTAATGCGAGTCTGTGTCTTCCTCGTAGTCTCCGGAATTaGACACGAGGAACTGTGAGT +
Preference number: 5 (lower is better)
Translates to: LNKTEITVTKGNASLCLPRSLRN*TRGTVS
Trigger: ACTCACAGTTCCTCGTGTCAAATTCCGGAGACTACG...AGGAAGACACAGACTCGCATTACCCTTGGTCACTGTGATTTCTGTTTTGTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp AGTCTCATCTGCAAACTACAGTCTCATCTGCAAATGGCCCAGGTGAGAATAAAACAAAGTCGTCGCCTGTaGACAGGAGTTTCTTCTCAT +
Preference number: 5 (lower is better)
Translates to: SLICKLQSHLQMAQVRIKQSRRL*TGVSSH
Trigger: ATGAGAAGAAACTCCTGTCAACAGGCGACGACTTTG...TTTTATTCTCACCTGGGCCATTTGCAGATGAGACTGTAGTTTGCAGATGAGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262233.11
ENST00000649352.1
CDS-3UTR CAA 90 bp AATTTCTGCCACCTCCGTTTAACGCATCAGAACTCAATCTTATCTCATACTGTAGAGAAGAGGTGCACTTaGCCAAAGTCGTCGCCTGTT +
Preference number: 5 (lower is better)
Translates to: NFCHLRLTHQNSILSHTVEKRCT*PKSSPV
Trigger: AACAGGCGACGACTTTGGCAAAGTGCACCTCTTCTC...TACAGTATGAGATAAGATTGAGTTCTGATGCGTTAAACGGAGGTGGCAGAAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp CTGTGTCATATATTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGAACGTTGCAACCTTGTaGGTATTCAATGTGCACTGT +
Preference number: 5 (lower is better)
Translates to: LCHILYNKSEHGTADPLWNVATL*VFNVHC
Trigger: ACAGTGCACATTGAATACCAACAAGGTTGCAACGTT...CCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATGACACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp AAGTCAGTTAGGAGTAGAGTCTGCTTAGCACAAGAGGGATACAAGCCCTCTCTCTACCCTGCTGAAATATaGAAGTCAGTTAGGAGTAGA +
Preference number: 5 (lower is better)
Translates to: KSVRSRVCLAQEGYKPSLYPAEI*KSVRSR
Trigger: TCTACTCCTAACTGACTTCAATATTTCAGCAGGGTA...GAGAGAGGGCTTGTATCCCTCTTGTGCTAAGCAGACTCTACTCCTAACTGACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp CTGTGTCATATATTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGGATCTGTTTAATCTTTaGGTTGCTGGCACAGCAGTT +
Preference number: 5 (lower is better)
Translates to: LCHILYNKSEHGTADPLWDLFNL*VAGTAV
Trigger: AACTGCTGTGCCAGCAACCAAAAGATTAAACAGATC...CCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATGACACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp TTAAACAAAACAGAAATCACAGTGACCAAGGGTAATGCGAGTCTGTGTCTTCCTGAAGGATTTTGGGCTTaGGTAGCTGTAAGCCCCAGA +
Preference number: 5 (lower is better)
Translates to: LNKTEITVTKGNASLCLPEGFWA*VAVSPR
Trigger: TCTGGGGCTTACAGCTACCAAAGCCCAAAATCCTTC...AGGAAGACACAGACTCGCATTACCCTTGGTCACTGTGATTTCTGTTTTGTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000327921.13
CDS-3UTR CAA 90 bp AACTTGGAAACGCCTGTGTACCCTGCTGAAATATTGAAGTCAGTTAGGAGTAGAATCAGTGGTCTTGCTTaGGTAGGTCCTTTCCTGTTA +
Preference number: 5 (lower is better)
Translates to: NLETPVYPAEILKSVRSRISGLA*VGPFLL
Trigger: TAACAGGAAAGGACCTACCAAAGCAAGACCACTGAT...TCTACTCCTAACTGACTTCAATATTTCAGCAGGGTACACAGGCGTTTCCAAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp TTAAACAAAACAGAAATCACAGTGACCAAGGGTAATGCGAGTCTGTGTCTTCCTAACACAGTGCCATTGTaGACCGTGGTTCTTAAAGGC +
Preference number: 5 (lower is better)
Translates to: LNKTEITVTKGNASLCLPNTVPL*TVVLKG
Trigger: GCCTTTAAGAACCACGGTCAACAATGGCACTGTGTT...AGGAAGACACAGACTCGCATTACCCTTGGTCACTGTGATTTCTGTTTTGTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp AACTTGGAAACGCCTGTGTACCCTGCTGAAATATTGAAGTCAGTTAGGAGTAGAGGTAACACAGTGCCATaGTTGACCGTGGTTCTTAAA +
Preference number: 5 (lower is better)
Translates to: NLETPVYPAEILKSVRSRGNTVP*LTVVLK
Trigger: TTTAAGAACCACGGTCAACAATGGCACTGTGTTACC...TCTACTCCTAACTGACTTCAATATTTCAGCAGGGTACACAGGCGTTTCCAAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp AGACATTTCCAACCAATACTTCCCAGCTTAACATGGTGGAAGGAGCACAGATTTGAAGAGCTGGTCCTCTaGATGTTACTTTTGGTTGCT +
Preference number: 5 (lower is better)
Translates to: RHFQPILPSLTWWKEHRFEELVL*MLLLVA
Trigger: AGCAACCAAAAGTAACATCAAGAGGACCAGCTCTTC...AAATCTGTGCTCCTTCCACCATGTTAAGCTGGGAAGTATTGGTTGGAAATGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557741.1
CDS-3UTR CAA 90 bp AAGTCAGTTAGGAGTAGAGTCTGCTTAGCACAAGAGGGATACAAGCCCTCTCTCTTGGAAGTTCTACTTTaGCTTCCAAGCTGTAAGAAT +
Preference number: 5 (lower is better)
Translates to: KSVRSRVCLAQEGYKPSLLEVLL*LPSCKN
Trigger: ATTCTTACAGCTTGGAAGCAAAAGTAGAACTTCCAA...GAGAGAGGGCTTGTATCCCTCTTGTGCTAAGCAGACTCTACTCCTAACTGACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp TCAGAACTCAATCTTATCTCATACTGTAATGGGTCGCCCATGCACAAAAGACAGCCCCATACTAAGATGTaGCCACTTGAATCTCCAGTA +
Preference number: 5 (lower is better)
Translates to: SELNLISYCNGSPMHKRQPHTKM*PLESPV
Trigger: TACTGGAGATTCAAGTGGCAACATCTTAGTATGGGG...CTGTCTTTTGTGCATGGGCGACCCATTACAGTATGAGATAAGATTGAGTTCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp TTAAACAAAACAGAAATCACAGTGACCAAGGGTAATGCGAGTCTGTGTCTTCCTTCAAGAACTGAGATTTaGAGGCATGGATGGCCAGTC +
Preference number: 5 (lower is better)
Translates to: LNKTEITVTKGNASLCLPSRTEI*RHGWPV
Trigger: GACTGGCCATCCATGCCTCAAAATCTCAGTTCTTGA...AGGAAGACACAGACTCGCATTACCCTTGGTCACTGTGATTTCTGTTTTGTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp AGTCTCATCTGCAAACTACAGTCTCATCTGCAAATGGCCCAGGTGAGAATAAAAGTGTACTTCCTCCCGTaGTCACTAACGCCATATATA +
Preference number: 5 (lower is better)
Translates to: SLICKLQSHLQMAQVRIKVYFLP*SLTPYI
Trigger: TATATATGGCGTTAGTGACAACGGGAGGAAGTACAC...TTTTATTCTCACCTGGGCCATTTGCAGATGAGACTGTAGTTTGCAGATGAGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262233.11
ENST00000649352.1
CDS-3UTR CAA 90 bp TCAGAACTCAATCTTATCTCATACTGTAATGGGTCGCCCATGCACAAAAGACAGGTGTACTTCCTCCCGTaGTCACTAACGCCATATATA +
Preference number: 5 (lower is better)
Translates to: SELNLISYCNGSPMHKRQVYFLP*SLTPYI
Trigger: TATATATGGCGTTAGTGACAACGGGAGGAAGTACAC...CTGTCTTTTGTGCATGGGCGACCCATTACAGTATGAGATAAGATTGAGTTCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp TTGAGTATGGTAATTAGGCCAAATCCTTTATGGTTATCTCCCCTGATGAATGCTCGTAGTCTCCGGAATTaGACACGAGGAACTGTGAGT +
Preference number: 5 (lower is better)
Translates to: LSMVIRPNPLWLSPLMNARSLRN*TRGTVS
Trigger: ACTCACAGTTCCTCGTGTCAAATTCCGGAGACTACG...AGCATTCATCAGGGGAGATAACCATAAAGGATTTGGCCTAATTACCATACTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262233.11
ENST00000649352.1
CDS-3UTR CAA 90 bp AACGTTGCAACCTTGTTGGTATTCAATGTGCACTGTGTCATATATTGTACAACAGAGAAGAGGTGCACTTaGCCAAAGTCGTCGCCTGTT +
Preference number: 5 (lower is better)
Translates to: NVATLLVFNVHCVIYCTTEKRCT*PKSSPV
Trigger: AACAGGCGACGACTTTGGCAAAGTGCACCTCTTCTC...TGTTGTACAATATATGACACAGTGCACATTGAATACCAACAAGGTTGCAACGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp ATGGTAATTAGGCCAAATCCTTTATGGTTATCTCCCCTGATGAATGCTTCCACGATGGATAAGGCCTTCTaGACAAATTTCTGCCACCTC +
Preference number: 5 (lower is better)
Translates to: MVIRPNPLWLSPLMNASTMDKAF*TNFCHL
Trigger: GAGGTGGCAGAAATTTGTCAAGAAGGCCTTATCCAT...CGTGGAAGCATTCATCAGGGGAGATAACCATAAAGGATTTGGCCTAATTACCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262233.11
ENST00000649352.1
CDS-3UTR CAA 90 bp CTGTGTCATATATTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGTGTTTAATCTTTTGGTaGCTGGCACAGCAGTTTCTT +
Preference number: 5 (lower is better)
Translates to: LCHILYNKSEHGTADPLWCLIFW*LAQQFL
Trigger: AAGAAACTGCTGTGCCAGCAACCAAAAGATTAAACA...CCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATGACACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp CAATGTGCACTGTGTCATATATTGTACAACAAAAGTGAACACGGAACCGCTGATGAAGAGCTGGTCCTCTaGATGTTACTTGGTGTCGAT +
Preference number: 5 (lower is better)
Translates to: QCALCHILYNKSEHGTADEELVL*MLLGVD
Trigger: ATCGACACCAAGTAACATCAAGAGGACCAGCTCTTC...ATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATGACACAGTGCACATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp TTAAACAAAACAGAAATCACAGTGACCAAGGGTAATGCGAGTCTGTGTCTTCCTGAAGAGCTGGTCCTCTaGATGTTACTTGGTGTCGAT +
Preference number: 5 (lower is better)
Translates to: LNKTEITVTKGNASLCLPEELVL*MLLGVD
Trigger: ATCGACACCAAGTAACATCAAGAGGACCAGCTCTTC...AGGAAGACACAGACTCGCATTACCCTTGGTCACTGTGATTTCTGTTTTGTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS GCA 90 bp ATAGACCCATTCCAGCTTGAGTCTCTTGGTTGGAAGTTCTACTTTTaGTTCCAAGCTGTAAGAATCCACTTGATCTTTGGGCATGTACAT +
Preference number: 5 (lower is better)
Translates to: IDPFQLESLGWKFYF*FQAVRIHLIFGHVH
Trigger: ATGTACATGCCCAAAGATCAAGTGGATTCTTACAGCTTGGAAGCAAAAGTAGAACTTCCAACCAAGAGACTCAAGCTGGAATGGGTCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000554479.5
ENST00000555277.1
ENST00000556714.5
ENST00000649352.1
CDS-3UTR CAA 90 bp CAAGGATACATACAAACAGATTCATCTTCAATAATACATGGTGTTTACTGGTGCTCACCTCCATGCTACTaGCAGCAGAAGCGCTGTCAT +
Preference number: 5 (lower is better)
Translates to: QGYIQTDSSSIIHGVYWCSPPCY*QQKRCH
Trigger: ATGACAGCGCTTCTGCTGCAAGTAGCATGGAGGTGA...GCACCAGTAAACACCATGTATTATTGAAGATGAATCTGTTTGTATGTATCCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp CAATTCCTCAACAGCCATCGTGGTTCAGTACCTCATTATCATCATAAATATTTGTCAGCTAGAGCTGATTaGAGCAGCTGGATGTCGTCT +
Preference number: 5 (lower is better)
Translates to: QFLNSHRGSVPHYHHKYLSARAD*SSWMSS
Trigger: AGACGACATCCAGCTGCTCAAATCAGCTCTAGCTGA...CAAATATTTATGATGATAATGAGGTACTGAACCACGATGGCTGTTGAGGAATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp GACAAATTTCTGCCACCTCCGTTTAACGCATCAGAACTCAATCTTATCTCATACGGTAACACAGTGCCATaGTTGACCGTGGTTCTTAAA +
Preference number: 5 (lower is better)
Translates to: DKFLPPPFNASELNLISYGNTVP*LTVVLK
Trigger: TTTAAGAACCACGGTCAACAATGGCACTGTGTTACC...GTATGAGATAAGATTGAGTTCTGATGCGTTAAACGGAGGTGGCAGAAATTTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp TTAAACAAAACAGAAATCACAGTGACCAAGGGTAATGCGAGTCTGTGTCTTCCTCTCTTGATGTTACTTTaGGTTGCTGGCACAGCAGTT +
Preference number: 5 (lower is better)
Translates to: LNKTEITVTKGNASLCLPLLMLL*VAGTAV
Trigger: AACTGCTGTGCCAGCAACCAAAAGTAACATCAAGAG...AGGAAGACACAGACTCGCATTACCCTTGGTCACTGTGATTTCTGTTTTGTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262233.11
CDS-3UTR CAA 90 bp GGCTATAATGTAAACGTTGCAACCTTGTTGGTATTCAATGTGCACTGTGTCATACTTTCACTGTTCTTTTaGCCACTGGAAGAGCTGCTG +
Preference number: 5 (lower is better)
Translates to: GYNVNVATLLVFNVHCVILSLFF*PLEELL
Trigger: CAGCAGCTCTTCCAGTGGCAAAAAGAACAGTGAAAG...TATGACACAGTGCACATTGAATACCAACAAGGTTGCAACGTTTACATTATAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp CAATGTGCACTGTGTCATATATTGTACAACAAAAGTGAACACGGAACCGCTGATACAGGCTCCTTGGGTTaGCTTTCACTGTTCTTTTTG +
Preference number: 5 (lower is better)
Translates to: QCALCHILYNKSEHGTADTGSLG*LSLFFL
Trigger: CAAAAAGAACAGTGAAAGCAAACCCAAGGAGCCTGT...ATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATGACACAGTGCACATTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp GGCTATAATGTAAACGTTGCAACCTTGTTGGTATTCAATGTGCACTGTGTCATACTGAATACAGGCTCCTaGGGTTTGCTTTCACTGTTC +
Preference number: 5 (lower is better)
Translates to: GYNVNVATLLVFNVHCVILNTGS*GLLSLF
Trigger: GAACAGTGAAAGCAAACCCAAGGAGCCTGTATTCAG...TATGACACAGTGCACATTGAATACCAACAAGGTTGCAACGTTTACATTATAGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp AACTTGGAAACGCCTGTGTACCCTGCTGAAATATTGAAGTCAGTTAGGAGTAGATCCACAGCACAGAGATaGGTTCCTCCATTAGATTTT +
Preference number: 5 (lower is better)
Translates to: NLETPVYPAEILKSVRSRSTAQR*VPPLDF
Trigger: AAAATCTAATGGAGGAACCAATCTCTGTGCTGTGGA...TCTACTCCTAACTGACTTCAATATTTCAGCAGGGTACACAGGCGTTTCCAAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp TTAAACAAAACAGAAATCACAGTGACCAAGGGTAATGCGAGTCTGTGTCTTCCTCCCCATACTAAGATGTaGCCACTTGAATCTCCAGTA +
Preference number: 5 (lower is better)
Translates to: LNKTEITVTKGNASLCLPPHTKM*PLESPV
Trigger: TACTGGAGATTCAAGTGGCAACATCTTAGTATGGGG...AGGAAGACACAGACTCGCATTACCCTTGGTCACTGTGATTTCTGTTTTGTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp CTGTGTCATATATTGTACAACAAAAGTGAACACGGAACCGCTGATCCGCTGTGGCATAGCTTATTCGATTaGTACCTTTTCCCCATACTA +
Preference number: 5 (lower is better)
Translates to: LCHILYNKSEHGTADPLWHSLFD*YLFPIL
Trigger: TAGTATGGGGAAAAGGTACAAATCGAATAAGCTATG...CCACAGCGGATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATGACACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp AGCCTCCCCAAGGGAGAATGCAATGAAACTTTGGAAAATGTAACCAAACACAGTGGACAAAGTTTCGAGTaGTGCCAATCAAGATCACAT +
Preference number: 5 (lower is better)
Translates to: SLPKGECNETLENVTKHSGQSFE*CQSRSH
Trigger: ATGTGATCTTGATTGGCACAACTCGAAACTTTGTCC...ACTGTGTTTGGTTACATTTTCCAAAGTTTCATTGCATTCTCCCTTGGGGAGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp TTGAGTATGGTAATTAGGCCAAATCCTTTATGGTTATCTCCCCTGATGAATGCTTCAAGAACTGAGATTTaGAGGCATGGATGGCCAGTC +
Preference number: 5 (lower is better)
Translates to: LSMVIRPNPLWLSPLMNASRTEI*RHGWPV
Trigger: GACTGGCCATCCATGCCTCAAAATCTCAGTTCTTGA...AGCATTCATCAGGGGAGATAACCATAAAGGATTTGGCCTAATTACCATACTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262233.11
ENST00000649352.1
CDS-3UTR CAA 90 bp TTAAACAAAACAGAAATCACAGTGACCAAGGGTAATGCGAGTCTGTGTCTTCCTGTGTACTTCCTCCCGTaGTCACTAACGCCATATATA +
Preference number: 5 (lower is better)
Translates to: LNKTEITVTKGNASLCLPVYFLP*SLTPYI
Trigger: TATATATGGCGTTAGTGACAACGGGAGGAAGTACAC...AGGAAGACACAGACTCGCATTACCCTTGGTCACTGTGATTTCTGTTTTGTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp AATATCATCTCATGCCAAGTAATATACACAAGAAGGTGGCAAAATGTCTCACCGCAAAGTCGTCGCCTGTaGACAGGAGTTTCTTCTCAT +
Preference number: 5 (lower is better)
Translates to: NIISCQVIYTRRWQNVSPQSRRL*TGVSSH
Trigger: ATGAGAAGAAACTCCTGTCAACAGGCGACGACTTTG...CGGTGAGACATTTTGCCACCTTCTTGTGTATATTACTTGGCATGAGATGATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp TTAAACAAAACAGAAATCACAGTGACCAAGGGTAATGCGAGTCTGTGTCTTCCTGCTGTAAGAATCCACTaGATCTTTGGGCATGTACAT +
Preference number: 5 (lower is better)
Translates to: LNKTEITVTKGNASLCLPAVRIH*IFGHVH
Trigger: ATGTACATGCCCAAAGATCAAGTGGATTCTTACAGC...AGGAAGACACAGACTCGCATTACCCTTGGTCACTGTGATTTCTGTTTTGTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp TTAAACAAAACAGAAATCACAGTGACCAAGGGTAATGCGAGTCTGTGTCTTCCTTCCACAGCACAGAGATaGGTTCCTCCATTAGATTTT +
Preference number: 5 (lower is better)
Translates to: LNKTEITVTKGNASLCLPSTAQR*VPPLDF
Trigger: AAAATCTAATGGAGGAACCAATCTCTGTGCTGTGGA...AGGAAGACACAGACTCGCATTACCCTTGGTCACTGTGATTTCTGTTTTGTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp CAATGTGCACTGTGTCATATATTGTACAACAAAAGTGAACACGGAACCGCTGATTCCACAGCACAGAGATaGGTTCCTCCATTAGATTTT +
Preference number: 5 (lower is better)
Translates to: QCALCHILYNKSEHGTADSTAQR*VPPLDF
Trigger: AAAATCTAATGGAGGAACCAATCTCTGTGCTGTGGA...ATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATGACACAGTGCACATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp TTAAACAAAACAGAAATCACAGTGACCAAGGGTAATGCGAGTCTGTGTCTTCCTCACAGAGGACAAACTTaGGCTTTTCTTGTTTCTCGA +
Preference number: 5 (lower is better)
Translates to: LNKTEITVTKGNASLCLPHRGQT*AFLVSR
Trigger: TCGAGAAACAAGAAAAGCCAAAGTTTGTCCTCTGTG...AGGAAGACACAGACTCGCATTACCCTTGGTCACTGTGATTTCTGTTTTGTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp TTGAGTATGGTAATTAGGCCAAATCCTTTATGGTTATCTCCCCTGATGAATGCTCCCCATACTAAGATGTaGCCACTTGAATCTCCAGTA +
Preference number: 5 (lower is better)
Translates to: LSMVIRPNPLWLSPLMNAPHTKM*PLESPV
Trigger: TACTGGAGATTCAAGTGGCAACATCTTAGTATGGGG...AGCATTCATCAGGGGAGATAACCATAAAGGATTTGGCCTAATTACCATACTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262233.11
ENST00000649352.1
CDS-3UTR CAA 90 bp TTAAACAAAACAGAAATCACAGTGACCAAGGGTAATGCGAGTCTGTGTCTTCCTGGACAAAGTTTCGAGTaGTGCCAATCAAGATCACAT +
Preference number: 5 (lower is better)
Translates to: LNKTEITVTKGNASLCLPGQSFE*CQSRSH
Trigger: ATGTGATCTTGATTGGCACAACTCGAAACTTTGTCC...AGGAAGACACAGACTCGCATTACCCTTGGTCACTGTGATTTCTGTTTTGTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp GACAAATTTCTGCCACCTCCGTTTAACGCATCAGAACTCAATCTTATCTCATACGGACAAAGTTTCGAGTaGTGCCAATCAAGATCACAT +
Preference number: 5 (lower is better)
Translates to: DKFLPPPFNASELNLISYGQSFE*CQSRSH
Trigger: ATGTGATCTTGATTGGCACAACTCGAAACTTTGTCC...GTATGAGATAAGATTGAGTTCTGATGCGTTAAACGGAGGTGGCAGAAATTTGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp CAAGGATACATACAAACAGATTCATCTTCAATAATACATGGTGTTTACTGGTGCTTCCACACTTACGACTaGCTTACAGGCAGAGGGAAC +
Preference number: 5 (lower is better)
Translates to: QGYIQTDSSSIIHGVYWCFHTYD*LTGRGN
Trigger: GTTCCCTCTGCCTGTAAGCAAGTCGTAAGTGTGGAA...GCACCAGTAAACACCATGTATTATTGAAGATGAATCTGTTTGTATGTATCCTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp AGCCTCCCCAAGGGAGAATGCAATGAAACTTTGGAAAATGTAACCAAACACAGTTACCCTGCTGAAATATaGAAGTCAGTTAGGAGTAGA +
Preference number: 5 (lower is better)
Translates to: SLPKGECNETLENVTKHSYPAEI*KSVRSR
Trigger: TCTACTCCTAACTGACTTCAATATTTCAGCAGGGTA...ACTGTGTTTGGTTACATTTTCCAAAGTTTCATTGCATTCTCCCTTGGGGAGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp CTGCCACCTCCGTTTAACGCATCAGAACTCAATCTTATCTCATACTGTAATGGGAGAGATCTTTCTGACTaGGTCTACTTGGTCATAAAA +
Preference number: 5 (lower is better)
Translates to: LPPPFNASELNLISYCNGRDLSD*VYLVIK
Trigger: TTTTATGACCAAGTAGACCAAGTCAGAAAGATCTCT...CCCATTACAGTATGAGATAAGATTGAGTTCTGATGCGTTAAACGGAGGTGGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp AATATCATCTCATGCCAAGTAATATACACAAGAAGGTGGCAAAATGTCTCACCGATGGATAAGGCCTTCTaGACAAATTTCTGCCACCTC +
Preference number: 5 (lower is better)
Translates to: NIISCQVIYTRRWQNVSPMDKAF*TNFCHL
Trigger: GAGGTGGCAGAAATTTGTCAAGAAGGCCTTATCCAT...CGGTGAGACATTTTGCCACCTTCTTGTGTATATTACTTGGCATGAGATGATATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp AACTTGGAAACGCCTGTGTACCCTGCTGAAATATTGAAGTCAGTTAGGAGTAGATGTTTAATCTTTTGGTaGCTGGCACAGCAGTTTCTT +
Preference number: 5 (lower is better)
Translates to: NLETPVYPAEILKSVRSRCLIFW*LAQQFL
Trigger: AAGAAACTGCTGTGCCAGCAACCAAAAGATTAAACA...TCTACTCCTAACTGACTTCAATATTTCAGCAGGGTACACAGGCGTTTCCAAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp TTAAACAAAACAGAAATCACAGTGACCAAGGGTAATGCGAGTCTGTGTCTTCCTGATCTGTTTAATCTTTaGGTTGCTGGCACAGCAGTT +
Preference number: 5 (lower is better)
Translates to: LNKTEITVTKGNASLCLPDLFNL*VAGTAV
Trigger: AACTGCTGTGCCAGCAACCAAAAGATTAAACAGATC...AGGAAGACACAGACTCGCATTACCCTTGGTCACTGTGATTTCTGTTTTGTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp TTAAACAAAACAGAAATCACAGTGACCAAGGGTAATGCGAGTCTGTGTCTTCCTTTCAGTTTGCAAGCATaGAGAAGACTCACAGATCTG +
Preference number: 5 (lower is better)
Translates to: LNKTEITVTKGNASLCLPFSLQA*RRLTDL
Trigger: CAGATCTGTGAGTCTTCTCAATGCTTGCAAACTGAA...AGGAAGACACAGACTCGCATTACCCTTGGTCACTGTGATTTCTGTTTTGTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp CAATGTGCACTGTGTCATATATTGTACAACAAAAGTGAACACGGAACCGCTGATTTCAGTTTGCAAGCATaGAGAAGACTCACAGATCTG +
Preference number: 5 (lower is better)
Translates to: QCALCHILYNKSEHGTADFSLQA*RRLTDL
Trigger: CAGATCTGTGAGTCTTCTCAATGCTTGCAAACTGAA...ATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATGACACAGTGCACATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334192.8
ENST00000649352.1
CDS GCA 90 bp GCCTTCTTCTACAAAAAGAACAAAGATTTCAGTAAGATACCTCAGTaGCCAGCGTACCTGAAAACAAATGCTTTATCCTCTCTAGCCTTT +
Preference number: 5 (lower is better)
Translates to: AFFYKKNKDFSKIPQ*PAYLKTNALSSLAF
Trigger: AAAGGCTAGAGAGGATAAAGCATTTGTTTTCAGGTACGCTGGGCACTGAGGTATCTTACTGAAATCTTTGTTCTTTTTGTAGAAGAAGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555277.1
CDS-3UTR CAA 90 bp CAAGGATACATACAAACAGATTCATCTTCAATAATACATGGTGTTTACTGGTGCAACACAGTGCCATTGTaGACCGTGGTTCTTAAAGGC +
Preference number: 5 (lower is better)
Translates to: QGYIQTDSSSIIHGVYWCNTVPL*TVVLKG
Trigger: GCCTTTAAGAACCACGGTCAACAATGGCACTGTGTT...GCACCAGTAAACACCATGTATTATTGAAGATGAATCTGTTTGTATGTATCCTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp CAAGGATACATACAAACAGATTCATCTTCAATAATACATGGTGTTTACTGGTGCCTTTCACTGTTCTTTTaGCCACTGGAAGAGCTGCTG +
Preference number: 5 (lower is better)
Translates to: QGYIQTDSSSIIHGVYWCLSLFF*PLEELL
Trigger: CAGCAGCTCTTCCAGTGGCAAAAAGAACAGTGAAAG...GCACCAGTAAACACCATGTATTATTGAAGATGAATCTGTTTGTATGTATCCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp GGCTATAATGTAAACGTTGCAACCTTGTTGGTATTCAATGTGCACTGTGTCATAGCTGTAAGAATCCACTaGATCTTTGGGCATGTACAT +
Preference number: 5 (lower is better)
Translates to: GYNVNVATLLVFNVHCVIAVRIH*IFGHVH
Trigger: ATGTACATGCCCAAAGATCAAGTGGATTCTTACAGC...TATGACACAGTGCACATTGAATACCAACAAGGTTGCAACGTTTACATTATAGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp CAATGTGCACTGTGTCATATATTGTACAACAAAAGTGAACACGGAACCGCTGATCGTTTTACGAAGTTTTaGATAGTTTCCGCTCCAAGA +
Preference number: 5 (lower is better)
Translates to: QCALCHILYNKSEHGTADRFTKF*IVSAPR
Trigger: TCTTGGAGCGGAAACTATCAAAAACTTCGTAAAACG...ATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATGACACAGTGCACATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp AACGTTGCAACCTTGTTGGTATTCAATGTGCACTGTGTCATATATTGTACAACAGTGTACTTCCTCCCGTaGTCACTAACGCCATATATA +
Preference number: 5 (lower is better)
Translates to: NVATLLVFNVHCVIYCTTVYFLP*SLTPYI
Trigger: TATATATGGCGTTAGTGACAACGGGAGGAAGTACAC...TGTTGTACAATATATGACACAGTGCACATTGAATACCAACAAGGTTGCAACGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp TTGAGTATGGTAATTAGGCCAAATCCTTTATGGTTATCTCCCCTGATGAATGCTAACGTTGCAACCTTGTaGGTATTCAATGTGCACTGT +
Preference number: 5 (lower is better)
Translates to: LSMVIRPNPLWLSPLMNANVATL*VFNVHC
Trigger: ACAGTGCACATTGAATACCAACAAGGTTGCAACGTT...AGCATTCATCAGGGGAGATAACCATAAAGGATTTGGCCTAATTACCATACTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262233.11
ENST00000649352.1
CDS-3UTR CAA 90 bp GGCTATAATGTAAACGTTGCAACCTTGTTGGTATTCAATGTGCACTGTGTCATAGTAAACGTTGCAACCTaGTTGGTATTCAATGTGCAC +
Preference number: 5 (lower is better)
Translates to: GYNVNVATLLVFNVHCVIVNVAT*LVFNVH
Trigger: GTGCACATTGAATACCAACAAGGTTGCAACGTTTAC...TATGACACAGTGCACATTGAATACCAACAAGGTTGCAACGTTTACATTATAGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp TTGAGTATGGTAATTAGGCCAAATCCTTTATGGTTATCTCCCCTGATGAATGCTATCCTTTGTCCATTATaGAGCTTGGCAAACAGGAGT +
Preference number: 5 (lower is better)
Translates to: LSMVIRPNPLWLSPLMNAILCPL*SLANRS
Trigger: ACTCCTGTTTGCCAAGCTCAATAATGGACAAAGGAT...AGCATTCATCAGGGGAGATAACCATAAAGGATTTGGCCTAATTACCATACTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262233.11
ENST00000649352.1
CDS-3UTR CAA 90 bp GGCTATAATGTAAACGTTGCAACCTTGTTGGTATTCAATGTGCACTGTGTCATAATCCTTTGTCCATTATaGAGCTTGGCAAACAGGAGT +
Preference number: 5 (lower is better)
Translates to: GYNVNVATLLVFNVHCVIILCPL*SLANRS
Trigger: ACTCCTGTTTGCCAAGCTCAATAATGGACAAAGGAT...TATGACACAGTGCACATTGAATACCAACAAGGTTGCAACGTTTACATTATAGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262233.11
ENST00000649352.1
CDS-3UTR CAA 90 bp AATTTCTGCCACCTCCGTTTAACGCATCAGAACTCAATCTTATCTCATACTGTAGTGTGTTTGTATCCTTaGTCCATTATTGAGCTTGGC +
Preference number: 5 (lower is better)
Translates to: NFCHLRLTHQNSILSHTVVCLYP*SIIELG
Trigger: GCCAAGCTCAATAATGGACAAAGGATACAAACACAC...TACAGTATGAGATAAGATTGAGTTCTGATGCGTTAAACGGAGGTGGCAGAAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262233.11
ENST00000649352.1
CDS-3UTR CAA 90 bp AATATCATCTCATGCCAAGTAATATACACAAGAAGGTGGCAAAATGTCTCACCGTTCAGTTTGCAAGCATaGAGAAGACTCACAGATCTG +
Preference number: 5 (lower is better)
Translates to: NIISCQVIYTRRWQNVSPFSLQA*RRLTDL
Trigger: CAGATCTGTGAGTCTTCTCAATGCTTGCAAACTGAA...CGGTGAGACATTTTGCCACCTTCTTGTGTATATTACTTGGCATGAGATGATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp CAATTCCTCAACAGCCATCGTGGTTCAGTACCTCATTATCATCATAAATATTTGGCTGTAAGAATCCACTaGATCTTTGGGCATGTACAT +
Preference number: 5 (lower is better)
Translates to: QFLNSHRGSVPHYHHKYLAVRIH*IFGHVH
Trigger: ATGTACATGCCCAAAGATCAAGTGGATTCTTACAGC...CAAATATTTATGATGATAATGAGGTACTGAACCACGATGGCTGTTGAGGAATTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp TTAAACAAAACAGAAATCACAGTGACCAAGGGTAATGCGAGTCTGTGTCTTCCTTTGGAAGTTCTACTTTaGCTTCCAAGCTGTAAGAAT +
Preference number: 5 (lower is better)
Translates to: LNKTEITVTKGNASLCLPLEVLL*LPSCKN
Trigger: ATTCTTACAGCTTGGAAGCAAAAGTAGAACTTCCAA...AGGAAGACACAGACTCGCATTACCCTTGGTCACTGTGATTTCTGTTTTGTTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp CAATGTGCACTGTGTCATATATTGTACAACAAAAGTGAACACGGAACCGCTGATCATAGCTTATTCGATTaGTACCTTTTCCCCATACTA +
Preference number: 5 (lower is better)
Translates to: QCALCHILYNKSEHGTADHSLFD*YLFPIL
Trigger: TAGTATGGGGAAAAGGTACAAATCGAATAAGCTATG...ATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATGACACAGTGCACATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp AACGTTGCAACCTTGTTGGTATTCAATGTGCACTGTGTCATATATTGTACAACAGTAAACGTTGCAACCTaGTTGGTATTCAATGTGCAC +
Preference number: 5 (lower is better)
Translates to: NVATLLVFNVHCVIYCTTVNVAT*LVFNVH
Trigger: GTGCACATTGAATACCAACAAGGTTGCAACGTTTAC...TGTTGTACAATATATGACACAGTGCACATTGAATACCAACAAGGTTGCAACGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp CAATGTGCACTGTGTCATATATTGTACAACAAAAGTGAACACGGAACCGCTGATAGAGATCTTTCTGACTaGGTCTACTTGGTCATAAAA +
Preference number: 5 (lower is better)
Translates to: QCALCHILYNKSEHGTADRDLSD*VYLVIK
Trigger: TTTTATGACCAAGTAGACCAAGTCAGAAAGATCTCT...ATCAGCGGTTCCGTGTTCACTTTTGTTGTACAATATATGACACAGTGCACATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp AATTTCTGCCACCTCCGTTTAACGCATCAGAACTCAATCTTATCTCATACTGTACATAGCTTATTCGATTaGTACCTTTTCCCCATACTA +
Preference number: 5 (lower is better)
Translates to: NFCHLRLTHQNSILSHTVHSLFD*YLFPIL
Trigger: TAGTATGGGGAAAAGGTACAAATCGAATAAGCTATG...TACAGTATGAGATAAGATTGAGTTCTGATGCGTTAAACGGAGGTGGCAGAAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp GGCTATAATGTAAACGTTGCAACCTTGTTGGTATTCAATGTGCACTGTGTCATAGCACTGTGTCATATATaGTACAACAAAAGTGAACAC +
Preference number: 5 (lower is better)
Translates to: GYNVNVATLLVFNVHCVIALCHI*YNKSEH
Trigger: GTGTTCACTTTTGTTGTACAATATATGACACAGTGC...TATGACACAGTGCACATTGAATACCAACAAGGTTGCAACGTTTACATTATAGCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp AACGTTGCAACCTTGTTGGTATTCAATGTGCACTGTGTCATATATTGTACAACAGCACTGTGTCATATATaGTACAACAAAAGTGAACAC +
Preference number: 5 (lower is better)
Translates to: NVATLLVFNVHCVIYCTTALCHI*YNKSEH
Trigger: GTGTTCACTTTTGTTGTACAATATATGACACAGTGC...TGTTGTACAATATATGACACAGTGCACATTGAATACCAACAAGGTTGCAACGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS-3UTR CAA 90 bp CAAGGATACATACAAACAGATTCATCTTCAATAATACATGGTGTTTACTGGTGCTACCCTGCTGAAATATaGAAGTCAGTTAGGAGTAGA +
Preference number: 5 (lower is better)
Translates to: QGYIQTDSSSIIHGVYWCYPAEI*KSVRSR
Trigger: TCTACTCCTAACTGACTTCAATATTTCAGCAGGGTA...GCACCAGTAAACACCATGTATTATTGAAGATGAATCTGTTTGTATGTATCCTTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000649352.1
CDS CCA 72 bp CGGAGGGGCCCTCGCCGTCCGACATGGTGTGGAAGATaGGCGGCCGGCTGGCCACCAGCCTGCAGGGTCACT +
Preference number: 6 (lower is better)
Translates to: RRGPRRPTWCGR*AAGWPPACRVT
Trigger: AGTGACCCTGCAGGCTGGTGGCCAGCCGGCCGCCCATCTTCCACACCATGTCGGACGGCGAGGGCCCCTCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554479.5
ENST00000555145.5
CDS GCA 72 bp TGGTGTGGAAGATGGGCGGCCGGCTGGCCACCAGCCTaGAGGGTCACTCAGAGCCTCAGCGGCTGTCACCCA +
Preference number: 6 (lower is better)
Translates to: WCGRWAAGWPPA*RVTQSLSGCHP
Trigger: TGGGTGACAGCCGCTGAGGCTCTGAGTGACCCTGCAGGCTGGTGGCCAGCCGGCCGCCCATCTTCCACACCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554479.5
ENST00000555145.5
CDS TCA 72 bp CTCCTGCTTTCTGCCACAAGATCCTGCGCATCTGGGTaGTGGCAAGTAGGGCAGACGGGGCGCCCCAGGGGG +
Preference number: 6 (lower is better)
Translates to: LLLSATRSCASG*WQVGQTGRPRG
Trigger: CCCCCTGGGGCGCCCCGTCTGCCCTACTTGCCATCACCCAGATGCGCAGGATCTTGTGGCAGAAAGCAGGAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327921.13
CDS CCA 72 bp TGCCTATTTCGGCCGTTTCCACGCCGCGGCTCACTGTaGCCCACATCCGACCGGCGCGTTCCTCTGTCCACA +
Preference number: 6 (lower is better)
Translates to: CLFRPFPRRGSL*PTSDRRVPLST
Trigger: TGTGGACAGAGGAACGCGCCGGTCGGATGTGGGCCACAGTGAGCCGCGGCGTGGAAACGGCCGAAATAGGCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649352.1
CDS GCA 72 bp AGGTTCCCAGGGTGCCGACCAGGGCGCCTGTCCAAGTaGTGGACACAGCTTCTGGGCATGCTGTCTCATCCC +
Preference number: 6 (lower is better)
Translates to: RFPGCRPGRLSK*WTQLLGMLSHP
Trigger: GGGATGAGACAGCATGCCCAGAAGCTGTGTCCAGCACTTGGACAGGCGCCCTGGTCGGCACCCTGGGAACCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553720.5
CDS CCA 72 bp CAGGCTCCTGCTTTCTGCCACAAGATCCTGCGCATCTaGGTGATGGCAAGTAGGGCAGACGGGGCGCCCCAG +
Preference number: 6 (lower is better)
Translates to: QAPAFCHKILRI*VMASRADGAPQ
Trigger: CTGGGGCGCCCCGTCTGCCCTACTTGCCATCACCCAGATGCGCAGGATCTTGTGGCAGAAAGCAGGAGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327921.13
CDS CCA 72 bp GTCATATTTCGGCCGTTTCCACGCCGCGGCTCACTGTaGCCCACATCCGACCGGCGCGTTCCTCTGTCCACA +
Preference number: 6 (lower is better)
Translates to: VIFRPFPRRGSL*PTSDRRVPLST
Trigger: TGTGGACAGAGGAACGCGCCGGTCGGATGTGGGCCACAGTGAGCCGCGGCGTGGAAACGGCCGAAATATGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556835.5
CDS CCA 72 bp TCTCTGGGCCTAAGGCAGGTAGATTCTGGGACCTCCTaGGGTCTTTGCAGCCTGTGCTCCAGGGGCCCTAGC +
Preference number: 6 (lower is better)
Translates to: SLGLRQVDSGTS*GLCSLCSRGPS
Trigger: GCTAGGGCCCCTGGAGCACAGGCTGCAAAGACCCCAGGAGGTCCCAGAATCTACCTGCCTTAGGCCCAGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327921.13
CDS CCA 72 bp CGTCCACCCCTCTCTGGGCCTAAGGCAGGTAGATTCTaGGACCTCCTGGGGTCTTTGCAGCCTGTGCTCCAG +
Preference number: 6 (lower is better)
Translates to: RPPLSGPKAGRF*DLLGSLQPVLQ
Trigger: CTGGAGCACAGGCTGCAAAGACCCCAGGAGGTCCCAGAATCTACCTGCCTTAGGCCCAGAGAGGGGTGGACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327921.13
CDS CCA 72 bp CCAGGGGGACGGCTGCAGTTAGTGAAATCAGCTCCGTaGCCTGGGAGTTCTGCAGAGCAGAGAGGGGATCCG +
Preference number: 6 (lower is better)
Translates to: PGGRLQLVKSAP*PGSSAEQRGDP
Trigger: CGGATCCCCTCTCTGCTCTGCAGAACTCCCAGGCCACGGAGCTGATTTCACTAACTGCAGCCGTCCCCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000327921.13
CDS GCA 72 bp GTCACAGAATCCCAGATGCGCACATGTGGGGGCAATTaGGGGCGAGGTGGCGTGTGCCTGTACTCCCAGCTA +
Preference number: 6 (lower is better)
Translates to: VTESQMRTCGGN*GRGGVCLYSQL
Trigger: TAGCTGGGAGTACAGGCACACGCCACCTCGCCCGCAATTGCCCCCACATGTGCGCATCTGGGATTCTGTGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555812.5
CDS CCA 72 bp CCCAGACGGGACGGTGACCCACAGCGTCCCAGAGAGTaGCATGCTTGTCATGCCCACAGGTCAAGAACTGAG +
Preference number: 6 (lower is better)
Translates to: PRRDGDPQRPRE*HACHAHRSRTE
Trigger: CTCAGTTCTTGACCTGTGGGCATGACAAGCATGCCACTCTCTGGGACGCTGTGGGTCACCGTCCCGTCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000554111.1
ENST00000557313.5
ENST00000649352.1
CDS CCA 72 bp GGGACGGCTGCAGTTAGTGAAATCAGCTCCGTGGCCTaGGAGTTCTGCAGAGCAGAGAGGGGATCCGGAAGC +
Preference number: 6 (lower is better)
Translates to: GTAAVSEISSVA*EFCRAERGSGS
Trigger: GCTTCCGGATCCCCTCTCTGCTCTGCAGAACTCCCAGGCCACGGAGCTGATTTCACTAACTGCAGCCGTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327921.13
CDS CCA 72 bp CGGGACTGGCAAGTCAGCTCGAACCTTCGCTCACACTaGGCCAGAGAGGCTATCCTGGTACCAGGCTGGAAG +
Preference number: 6 (lower is better)
Translates to: RDWQVSSNLRSH*AREAILVPGWK
Trigger: CTTCCAGCCTGGTACCAGGATAGCCTCTCTGGCCCAGTGTGAGCGAAGGTTCGAGCTGACTTGCCAGTCCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556835.5
ENST00000649352.1
CDS CCA 72 bp TTCCCAGGGTGCCGACCAGGGCGCCTGTCCAAGTGCTaGACACAGCTTCTGGGCATGCTGTCTCATCCCTTA +
Preference number: 6 (lower is better)
Translates to: FPGCRPGRLSKC*TQLLGMLSHPL
Trigger: TAAGGGATGAGACAGCATGCCCAGAAGCTGTGTCCAGCACTTGGACAGGCGCCCTGGTCGGCACCCTGGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553720.5
CDS CCA 72 bp CTCAAGCAATCCTCCTACCCCAGCCTCCCATGTAGCTaGGACCGCGGGTGTGTACCACCACTCCCAGCTACT +
Preference number: 6 (lower is better)
Translates to: LKQSSYPSLPCS*DRGCVPPLPAT
Trigger: AGTAGCTGGGAGTGGTGGTACACACCCGCGGTCCCAGCTACATGGGAGGCTGGGGTAGGAGGATTGCTTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554111.1
CDS CAA 72 bp TGTCACAGAATCCCAGATGCGCACATGTGGGGGCAATaGCGGGCGAGGTGGCGTGTGCCTGTACTCCCAGCT +
Preference number: 6 (lower is better)
Translates to: CHRIPDAHMWGQ*RARWRVPVLPA
Trigger: AGCTGGGAGTACAGGCACACGCCACCTCGCCCGCAATTGCCCCCACATGTGCGCATCTGGGATTCTGTGACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555812.5
CDS TCA 72 bp CACACGTTTTTCCGCGGCAGCAAGGCCCTGCCTCAGTaGGACTTAGCACGGGACTGGCAAGTCAGCTCGAAC +
Preference number: 6 (lower is better)
Translates to: HTFFRGSKALPQ*DLARDWQVSSN
Trigger: GTTCGAGCTGACTTGCCAGTCCCGTGCTAAGTCTCACTGAGGCAGGGCCTTGCTGCCGCGGAAAAACGTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000556835.5
ENST00000649352.1
CDS CCA 72 bp AGCTGCTGGTGGAGCCTGTGCGATTCCGGTTTCCTCTaGAATCCCCATTGCTTTCCCTTCGACCCCCAGGAG +
Preference number: 6 (lower is better)
Translates to: SCWWSLCDSGFL*NPHCFPFDPQE
Trigger: CTCCTGGGGGTCGAAGGGAAAGCAATGGGGATTCCAGAGGAAACCGGAATCGCACAGGCTCCACCAGCAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000554479.5
ENST00000556714.5
ENST00000556758.1
ENST00000557741.1
ENST00000649352.1
CDS CAA 90 bp CTGCTGGTGGAGCCTGTGCGATTCCGGTTTCCTCTGGAATCCCCATaGCTTTCCCTTCGACCCCCAGGAGACACTCGTTCAGAAGAGCTG +
Preference number: 6 (lower is better)
Translates to: LLVEPVRFRFPLESP*LSLRPPGDTRSEEL
Trigger: CAGCTCTTCTGAACGAGTGTCTCCTGGGGGTCGAAGGGAAAGCAATGGGGATTCCAGAGGAAACCGGAATCGCACAGGCTCCACCAGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000554479.5
ENST00000556714.5
ENST00000556758.1
ENST00000557741.1
ENST00000649352.1
CDS TCA 72 bp ACAGGAGTTTCTTCTCATGGGCCCGACAGACGGCATTaGTGTCGGTTCCGTCCGAGCCTTCTGGCCACACTC +
Preference number: 6 (lower is better)
Translates to: TGVSSHGPDRRH*CRFRPSLLATL
Trigger: GAGTGTGGCCAGAAGGCTCGGACGGAACCGACATCAATGCCGTCTGTCGGGCCCATGAGAAGAAACTCCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000553313.1
ENST00000649352.1
CDS GCA 72 bp CTGGCTGCTCCTCTTCCCATCCAGGCTCCTGCTTTCTaGCACAAGATCCTGCGCATCTGGGTGATGGCAAGT +
Preference number: 6 (lower is better)
Translates to: LAAPLPIQAPAF*HKILRIWVMAS
Trigger: ACTTGCCATCACCCAGATGCGCAGGATCTTGTGGCAGAAAGCAGGAGCCTGGATGGGAAGAGGAGCAGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327921.13
CDS GCA 72 bp TCTGCTCCAGTGAAGCAATGCGGTCTGTCACCTCCATaGTACTTGCAGCAGAAGCGCTGTCATCGGCGGAGG +
Preference number: 6 (lower is better)
Translates to: SAPVKQCGLSPP*YLQQKRCHRRR
Trigger: CCTCCGCCGATGACAGCGCTTCTGCTGCAAGTAGCATGGAGGTGACAGACCGCATTGCTTCACTGGAGCAGA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554479.5
ENST00000555145.5
CDS CAA 72 bp GACAGGAGTTTCTTCTCATGGGCCCGACAGACGGCATaGATGTCGGTTCCGTCCGAGCCTTCTGGCCACACT +
Preference number: 6 (lower is better)
Translates to: DRSFFSWARQTA*MSVPSEPSGHT
Trigger: AGTGTGGCCAGAAGGCTCGGACGGAACCGACATCAATGCCGTCTGTCGGGCCCATGAGAAGAAACTCCTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000553313.1
ENST00000649352.1
CDS CAA 90 bp AGTATTCAATGTCACAGAATCCCAGATGCGCACATGTGGGGGCAATaGCGGGCGAGGTGGCGTGTGCCTGTACTCCCAGCTACTCAGGAG +
Preference number: 6 (lower is better)
Translates to: SIQCHRIPDAHMWGQ*RARWRVPVLPATQE
Trigger: CTCCTGAGTAGCTGGGAGTACAGGCACACGCCACCTCGCCCGCAATTGCCCCCACATGTGCGCATCTGGGATTCTGTGACATTGAATACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555812.5
CDS TCA 72 bp AGGGCCAGTGGGGTGTCTCTTCACCACTGGGTTCCATaGAAACAAGAGCCCCTCCTAGAGCAGACAGTGCCT +
Preference number: 6 (lower is better)
Translates to: RASGVSLHHWVP*KQEPLLEQTVP
Trigger: AGGCACTGTCTGCTCTAGGAGGGGCTCTTGTTTTCATGGAACCCAGTGGTGAAGAGACACCCCACTGGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554111.1
CDS GCA 72 bp TCTGCTCCAGTGAAGCAATGCGGTCTGTCACCTCCATaGTACTTGCAGCAGAAGCGCTGTCATCCAGCCGTC +
Preference number: 6 (lower is better)
Translates to: SAPVKQCGLSPP*YLQQKRCHPAV
Trigger: GACGGCTGGATGACAGCGCTTCTGCTGCAAGTAGCATGGAGGTGACAGACCGCATTGCTTCACTGGAGCAGA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327921.13
CDS CCA 72 bp CCAAAGTCGTCGCCTGTTGACAGGAGTTTCTTCTCATaGGCCCGACAGACGGCATTGATGTCGGTTCCGTCC +
Preference number: 6 (lower is better)
Translates to: PKSSPVDRSFFS*ARQTALMSVPS
Trigger: GGACGGAACCGACATCAATGCCGTCTGTCGGGCCCATGAGAAGAAACTCCTGTCAACAGGCGACGACTTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000553313.1
ENST00000649352.1
CDS CCA 72 bp GACCAGGGCGCCTGTCCAAGTGCTGGACACAGCTTCTaGGCATGCTGTCTCATCCCTTACTTCAGCCAGAAT +
Preference number: 6 (lower is better)
Translates to: DQGACPSAGHSF*ACCLIPYFSQN
Trigger: ATTCTGGCTGAAGTAAGGGATGAGACAGCATGCCCAGAAGCTGTGTCCAGCACTTGGACAGGCGCCCTGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553720.5
CDS CAA 72 bp GAGCCTGTGCGATTCCGGTTTCCTCTGGAATCCCCATaGCTTTCCCTTCGACCCCCAGGAGACACTCGTTCA +
Preference number: 6 (lower is better)
Translates to: EPVRFRFPLESP*LSLRPPGDTRS
Trigger: TGAACGAGTGTCTCCTGGGGGTCGAAGGGAAAGCAATGGGGATTCCAGAGGAAACCGGAATCGCACAGGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000554479.5
ENST00000556714.5
ENST00000556758.1
ENST00000557741.1
ENST00000649352.1
CDS CAA 90 bp TCGCCTGTTGACAGGAGTTTCTTCTCATGGGCCCGACAGACGGCATaGATGTCGGTTCCGTCCGAGCCTTCTGGCCACACTCCAAAAACA +
Preference number: 6 (lower is better)
Translates to: SPVDRSFFSWARQTA*MSVPSEPSGHTPKT
Trigger: TGTTTTTGGAGTGTGGCCAGAAGGCTCGGACGGAACCGACATCAATGCCGTCTGTCGGGCCCATGAGAAGAAACTCCTGTCAACAGGCGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000553313.1
ENST00000649352.1
CDS CAA 90 bp CTTGGAGCCCTGAACTGCGAGCAGGGGTATGAGAAGAGGTGCACTTaGCCAAAGTCGTCGCCTGTTGACAGGAGTTTCTTCTCATGGGCC +
Preference number: 6 (lower is better)
Translates to: LGALNCEQGYEKRCT*PKSSPVDRSFFSWA
Trigger: GGCCCATGAGAAGAAACTCCTGTCAACAGGCGACGACTTTGGCAAAGTGCACCTCTTCTCATACCCCTGCTCGCAGTTCAGGGCTCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000553313.1
ENST00000649352.1
CDS TCA 72 bp GCTGGATCCTCTATTATTTTGTCCCAGACGGGACGGTaGCCCACAGCGTCCCAGAGAGTGGCATGCTTGTCA +
Preference number: 6 (lower is better)
Translates to: AGSSIILSQTGR*PTASQRVACLS
Trigger: TGACAAGCATGCCACTCTCTGGGACGCTGTGGGTCACCGTCCCGTCTGGGACAAAATAATAGAGGATCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000649352.1
CDS TCA 72 bp CACAGACCCTCTATTATTTTGTCCCAGACGGGACGGTaGCCCACAGCGTCCCAGAGAGTGGCATGCTTGTCA +
Preference number: 6 (lower is better)
Translates to: HRPSIILSQTGR*PTASQRVACLS
Trigger: TGACAAGCATGCCACTCTCTGGGACGCTGTGGGTCACCGTCCCGTCTGGGACAAAATAATAGAGGGTCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557313.5
CDS TCA 72 bp AGGCTATCCTGGTACCAGGCTGGAAGTCCCCCGTGTTaGGGACTCGACGCAGCTAAAACATCGCTTTGTGGT +
Preference number: 6 (lower is better)
Translates to: RLSWYQAGSPPC*GLDAAKTSLCG
Trigger: ACCACAAAGCGATGTTTTAGCTGCGTCGAGTCCTCAACACGGGGGACTTCCAGCCTGGTACCAGGATAGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000649352.1
CDS GCA 72 bp CTGCAACCTCCACCTTCCGGGTTCAAGCAATTCTCCTaGCTCAGCCTTCCAAGGAGCTGGGAGTATAGGCAT +
Preference number: 6 (lower is better)
Translates to: LQPPPSGFKQFS*LSLPRSWEYRH
Trigger: ATGCCTATACTCCCAGCTCCTTGGAAGGCTGAGGCAGGAGAATTGCTTGAACCCGGAAGGTGGAGGTTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554111.1
CDS CCA 72 bp CTTTACGAGCAGAGCGCCGGTATCCCACTTCCCTCGTaGCCATTAAGCAAGATGGGCTGGGGATTTCCAAGA +
Preference number: 6 (lower is better)
Translates to: LYEQSAGIPLPS*PLSKMGWGFPR
Trigger: TCTTGGAAATCCCCAGCCCATCTTGCTTAATGGCCACGAGGGAAGTGGGATACCGGCGCTCTGCTCGTAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327921.13
ENST00000556199.1
CDS CCA 72 bp AGTATTCAATGTCACAGAATCCCAGATGCGCACATGTaGGGGCAATTGCGGGCGAGGTGGCGTGTGCCTGTA +
Preference number: 6 (lower is better)
Translates to: SIQCHRIPDAHM*GQLRARWRVPV
Trigger: TACAGGCACACGCCACCTCGCCCGCAATTGCCCCCACATGTGCGCATCTGGGATTCTGTGACATTGAATACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555812.5
CDS CAA 72 bp CCCCTGACAGAGTGCCCTGCAGGACAAAGTTTCGAGTaGTGCCAATCAAGATCACATCGCCTTTCCCCTCGG +
Preference number: 6 (lower is better)
Translates to: PLTECPAGQSFE*CQSRSHRLSPR
Trigger: CCGAGGGGAAAGGCGATGTGATCTTGATTGGCACAACTCGAAACTTTGTCCTGCAGGGCACTCTGTCAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000554111.1
ENST00000649352.1
CDS GCA 72 bp TCTGCTCCAGTGAAGCAATGCGGTCTGTCACCTCCATaGTACTTGCAGCAGAAGCGCTGTCATCGTTGCAGA +
Preference number: 6 (lower is better)
Translates to: SAPVKQCGLSPP*YLQQKRCHRCR
Trigger: TCTGCAACGATGACAGCGCTTCTGCTGCAAGTAGCATGGAGGTGACAGACCGCATTGCTTCACTGGAGCAGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262233.11
ENST00000334192.8
ENST00000555096.5
CDS GCA 72 bp AGCAGCTGGATGTCGTCTTCTTGCATCTGGACTCTCTaGTCCAGTGAAGCAATGCGGTCTGTCACCTCCATG +
Preference number: 6 (lower is better)
Translates to: SSWMSSSCIWTL*SSEAMRSVTSM
Trigger: CATGGAGGTGACAGACCGCATTGCTTCACTGGAGCAGAGAGTCCAGATGCAAGAAGACGACATCCAGCTGCT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000553720.5
ENST00000554479.5
ENST00000555096.5
ENST00000555145.5
ENST00000556199.1
ENST00000556714.5
ENST00000556758.1
ENST00000556835.5
ENST00000556947.1
ENST00000649352.1
CDS GCA 72 bp CTGACAGAGTGCCCTGCAGGACAAAGTTTCGAGTTGTaGCAATCAAGATCACATCGCCTTTCCCCTCGGCCA +
Preference number: 6 (lower is better)
Translates to: LTECPAGQSFEL*QSRSHRLSPRP
Trigger: TGGCCGAGGGGAAAGGCGATGTGATCTTGATTGGCACAACTCGAAACTTTGTCCTGCAGGGCACTCTGTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000554111.1
ENST00000649352.1
CDS GCA 72 bp TCTGCTCCAGTGAAGCAATGCGGTCTGTCACCTCCATaGTACTTGCAGCAGAAGCGCTGTCATATTTCGGCC +
Preference number: 6 (lower is better)
Translates to: SAPVKQCGLSPP*YLQQKRCHISA
Trigger: GGCCGAAATATGACAGCGCTTCTGCTGCAAGTAGCATGGAGGTGACAGACCGCATTGCTTCACTGGAGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556835.5
CDS CCA 72 bp CGCCGAACCACATCAGCTAGAGCTGATTTGAGCAGCTaGATGTCGTCTTCTTGCATCTGGACTCTCTGCTCC +
Preference number: 6 (lower is better)
Translates to: RRTTSARADLSS*MSSSCIWTLCS
Trigger: GGAGCAGAGAGTCCAGATGCAAGAAGACGACATCCAGCTGCTCAAATCAGCTCTAGCTGATGTGGTTCGGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000553720.5
ENST00000554479.5
ENST00000555096.5
ENST00000555145.5
ENST00000556199.1
ENST00000556714.5
ENST00000556758.1
ENST00000556835.5
ENST00000556947.1
ENST00000649352.1
CDS CCA 72 bp TCACACACCCCATCTGTAGGAACCTATCTGTGGGGATaGCCTGTGACCGCTCTGCATCCAGGATGTTCAAGA +
Preference number: 6 (lower is better)
Translates to: SHTPSVGTYLWG*PVTALHPGCSR
Trigger: TCTTGAACATCCTGGATGCAGAGCGGTCACAGGCCATCCCCACAGATAGGTTCCTACAGATGGGGTGTGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327921.13
CDS TCA 72 bp TGTTCAGCCGCCGAACCACATCAGCTAGAGCTGATTTaGGCAGCTGGATGTCGTCTTCTTGCATCTGGACTC +
Preference number: 6 (lower is better)
Translates to: CSAAEPHQLELI*AAGCRLLASGL
Trigger: GAGTCCAGATGCAAGAAGACGACATCCAGCTGCTCAAATCAGCTCTAGCTGATGTGGTTCGGCGGCTGAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000553720.5
ENST00000554479.5
ENST00000555096.5
ENST00000555145.5
ENST00000556199.1
ENST00000556714.5
ENST00000556758.1
ENST00000556835.5
ENST00000556947.1
ENST00000649352.1
CDS TCA 72 bp TCTGTGAATCACTGTTTAGCCCTGAGGCCTGAGCCCTaGAGGATTTTGGGCTTTGGTAGCTGTAAGCCCCAG +
Preference number: 6 (lower is better)
Translates to: SVNHCLALRPEP*RILGFGSCKPQ
Trigger: CTGGGGCTTACAGCTACCAAAGCCCAAAATCCTTCAGGGCTCAGGCCTCAGGGCTAAACAGTGATTCACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000327921.13
CDS GCA 72 bp GCTAGAGCTGATTTGAGCAGCTGGATGTCGTCTTCTTaGATCTGGACTCTCTGCTCCAGTGAAGCAATGCGG +
Preference number: 6 (lower is better)
Translates to: ARADLSSWMSSS*IWTLCSSEAMR
Trigger: CCGCATTGCTTCACTGGAGCAGAGAGTCCAGATGCAAGAAGACGACATCCAGCTGCTCAAATCAGCTCTAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000553720.5
ENST00000554479.5
ENST00000555096.5
ENST00000555145.5
ENST00000556199.1
ENST00000556714.5
ENST00000556758.1
ENST00000556835.5
ENST00000556947.1
ENST00000649352.1
CDS GCA 72 bp CTTGCTTTGGTAGGTCCTTTCCTGTTAAGCACGGCCTaGTGTTCCTCAGTAATGTTCAGCCGCCGAACCACA +
Preference number: 6 (lower is better)
Translates to: LALVGPFLLSTA*CSSVMFSRRTT
Trigger: TGTGGTTCGGCGGCTGAACATTACTGAGGAACAGCAGGCCGTGCTTAACAGGAAAGGACCTACCAAAGCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000553720.5
ENST00000554479.5
ENST00000555145.5
ENST00000556199.1
ENST00000556714.5
ENST00000556758.1
ENST00000556835.5
ENST00000556947.1
ENST00000649352.1
CDS GCA 72 bp TCTTTTTGCCACTGGAAGAGCTGCTGGTGGAGCCTGTaGGATTCCGGTTTCCTCTGGAATCCCCATTGCTTT +
Preference number: 6 (lower is better)
Translates to: SFCHWKSCWWSL*DSGFLWNPHCF
Trigger: AAAGCAATGGGGATTCCAGAGGAAACCGGAATCGCACAGGCTCCACCAGCAGCTCTTCCAGTGGCAAAAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000554479.5
ENST00000556714.5
ENST00000556758.1
ENST00000557741.1
ENST00000649352.1
CDS GCA 72 bp TGGTCTTTGGTAGGTCCTTTCCTGTTAAGCACGGCCTaGTGTTCCTCAGTAATGTTCAGCCGCCGAACCACA +
Preference number: 6 (lower is better)
Translates to: WSLVGPFLLSTA*CSSVMFSRRTT
Trigger: TGTGGTTCGGCGGCTGAACATTACTGAGGAACAGCAGGCCGTGCTTAACAGGAAAGGACCTACCAAAGACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555096.5
CDS CCA 72 bp GCTGATTTGAGCAGCTGGATGTCGTCTTCTTGCATCTaGACTCTCTGCTCCAGTGAAGCAATGCGGTCTGTC +
Preference number: 6 (lower is better)
Translates to: ADLSSWMSSSCI*TLCSSEAMRSV
Trigger: GACAGACCGCATTGCTTCACTGGAGCAGAGAGTCCAGATGCAAGAAGACGACATCCAGCTGCTCAAATCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000553720.5
ENST00000554479.5
ENST00000555096.5
ENST00000555145.5
ENST00000556199.1
ENST00000556714.5
ENST00000556758.1
ENST00000556835.5
ENST00000556947.1
ENST00000649352.1
CDS CAA 72 bp CTGAACTGCGAGCAGGGGTATGAGAAGAGGTGCACTTaGCCAAAGTCGTCGCCTGTTGACAGGAGTTTCTTC +
Preference number: 6 (lower is better)
Translates to: LNCEQGYEKRCT*PKSSPVDRSFF
Trigger: GAAGAAACTCCTGTCAACAGGCGACGACTTTGGCAAAGTGCACCTCTTCTCATACCCCTGCTCGCAGTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000553313.1
ENST00000649352.1
CDS CAA 90 bp TCCTCAGTAATGTTCAGCCGCCGAACCACATCAGCTAGAGCTGATTaGAGCAGCTGGATGTCGTCTTCTTGCATCTGGACTCTCTGCTCC +
Preference number: 6 (lower is better)
Translates to: SSVMFSRRTTSARAD*SSWMSSSCIWTLCS
Trigger: GGAGCAGAGAGTCCAGATGCAAGAAGACGACATCCAGCTGCTCAAATCAGCTCTAGCTGATGTGGTTCGGCGGCTGAACATTACTGAGGA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000553720.5
ENST00000554479.5
ENST00000555096.5
ENST00000555145.5
ENST00000556199.1
ENST00000556714.5
ENST00000556758.1
ENST00000556835.5
ENST00000556947.1
ENST00000649352.1
CDS TCA 72 bp ATGTTTACCTCTATTATTTTGTCCCAGACGGGACGGTaGCCCACAGCGTCCCAGAGAGTGGCATGCTTGTCA +
Preference number: 6 (lower is better)
Translates to: MFTSIILSQTGR*PTASQRVACLS
Trigger: TGACAAGCATGCCACTCTCTGGGACGCTGTGGGTCACCGTCCCGTCTGGGACAAAATAATAGAGGTAAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554111.1
CDS GCA 72 bp TCTGCTCCAGTGAAGCAATGCGGTCTGTCACCTCCATaGTACTTGCAGCAGAAGCGCTGTCATTCAGAATCA +
Preference number: 6 (lower is better)
Translates to: SAPVKQCGLSPP*YLQQKRCHSES
Trigger: TGATTCTGAATGACAGCGCTTCTGCTGCAAGTAGCATGGAGGTGACAGACCGCATTGCTTCACTGGAGCAGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556947.1
ENST00000649352.1
CDS CCA 72 bp GATCACATCGCCTTTCCCCTCGGCCACTGTCCGTATTaGACCAAACTGTTCTGGAATCTCCGTTTTACGAAG +
Preference number: 6 (lower is better)
Translates to: DHIAFPLGHCPY*TKLFWNLRFTK
Trigger: CTTCGTAAAACGGAGATTCCAGAACAGTTTGGTCCAATACGGACAGTGGCCGAGGGGAAAGGCGATGTGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000554111.1
ENST00000649352.1
CDS CCA 72 bp ATGATGCTTGTGTCTTTCCCGCCCGTGGAGATGAGGTaGCTGTCTTCACAGAGGAAATCGACATTGGTGACA +
Preference number: 6 (lower is better)
Translates to: MMLVSFPPVEMR*LSSQRKSTLVT
Trigger: TGTCACCAATGTCGATTTCCTCTGTGAAGACAGCCACCTCATCTCCACGGGCGGGAAAGACACAAGCATCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000553313.1
ENST00000649352.1
CDS CAA 72 bp AATACAGGCTCCTTGGGTTTGCTTTCACTGTTCTTTTaGCCACTGGAAGAGCTGCTGGTGGAGCCTGTGCGA +
Preference number: 6 (lower is better)
Translates to: NTGSLGLLSLFF*PLEELLVEPVR
Trigger: TCGCACAGGCTCCACCAGCAGCTCTTCCAGTGGCAAAAAGAACAGTGAAAGCAAACCCAAGGAGCCTGTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000554479.5
ENST00000556714.5
ENST00000649352.1
CDS CAA 90 bp CTTCACCTCCACCAGCTTAACCTCCTTAATCTTTCACTGTTCTTTTaGCCACTGGAAGAGCTGCTGGTGGAGCCTGTGCGATTCCGGTTT +
Preference number: 6 (lower is better)
Translates to: LHLHQLNLLNLSLFF*PLEELLVEPVRFRF
Trigger: AAACCGGAATCGCACAGGCTCCACCAGCAGCTCTTCCAGTGGCAAAAAGAACAGTGAAAGATTAAGGAGGTTAAGCTGGTGGAGGTGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557741.1
CDS GCA 72 bp GTCAAACACAAACCACCTCCCAGTGAGTGTTCCGACTaGAACCACAGACCCTCTATTATTTTGTCCCAGACG +
Preference number: 6 (lower is better)
Translates to: VKHKPPPSECSD*NHRPSIILSQT
Trigger: CGTCTGGGACAAAATAATAGAGGGTCTGTGGTTGCAGTCGGAACACTCACTGGGAGGTGGTTTGTGTTTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557313.5
CDS CCA 72 bp AGTATTCAATGTCACAGAATCCCAGATGCGCACATGTaGGGGCAATTGTTTTCCATCCTTCGATGTGCCCGC +
Preference number: 6 (lower is better)
Translates to: SIQCHRIPDAHM*GQLFSILRCAR
Trigger: GCGGGCACATCGAAGGATGGAAAACAATTGCCCCCACATGTGCGCATCTGGGATTCTGTGACATTGAATACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000554386.1
ENST00000554479.5
ENST00000554553.5
ENST00000555277.1
ENST00000556714.5
ENST00000649352.1
CDS CAA 72 bp GGGCAATTGTTTTCCATCCTTCGATGTGCCCGCAACTaGTCCTGTTGCTATCGTGATCCGATCAGGATGAAC +
Preference number: 6 (lower is better)
Translates to: GQLFSILRCARN*SCCYRDPIRMN
Trigger: GTTCATCCTGATCGGATCACGATAGCAACAGGACAAGTTGCGGGCACATCGAAGGATGGAAAACAATTGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000554386.1
ENST00000554479.5
ENST00000554553.5
ENST00000555277.1
ENST00000556714.5
ENST00000649352.1
CDS CAA 72 bp AGATCACATCGCCTTTCCCCTCGGCCACTGTCCGTATaGGACCAAACTGTTCTGGAATCTCCGTTTTACGAA +
Preference number: 6 (lower is better)
Translates to: RSHRLSPRPLSV*DQTVLESPFYE
Trigger: TTCGTAAAACGGAGATTCCAGAACAGTTTGGTCCAATACGGACAGTGGCCGAGGGGAAAGGCGATGTGATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000554111.1
ENST00000649352.1
CDS CAA 90 bp GATGGTAGAGAGCCAGTAGGTTTCTTTGGTAACACAGTGCCATTGTaGACCGTGGTTCTTAAAGGCAGGGTCTGCATCAGTGGTCTTGCT +
Preference number: 6 (lower is better)
Translates to: DGREPVGFFGNTVPL*TVVLKGRVCISGLA
Trigger: AGCAAGACCACTGATGCAGACCCTGCCTTTAAGAACCACGGTCAACAATGGCACTGTGTTACCAAAGAAACCTACTGGCTCTCTACCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000554479.5
ENST00000555145.5
ENST00000556199.1
ENST00000556714.5
ENST00000556758.1
ENST00000556835.5
ENST00000556947.1
ENST00000649352.1
CDS CAA 90 bp GATGGTAGAGAGCCAGTAGGTTTCTTTGGTAACACAGTGCCATTGTaGACCGTGGTTCTTAAAGGCAGGGTCTGCATCAGTGGTCTTTGG +
Preference number: 6 (lower is better)
Translates to: DGREPVGFFGNTVPL*TVVLKGRVCISGLW
Trigger: CCAAAGACCACTGATGCAGACCCTGCCTTTAAGAACCACGGTCAACAATGGCACTGTGTTACCAAAGAAACCTACTGGCTCTCTACCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555096.5
CDS TCA 72 bp AGTCTCGACCCCTGTACCCATAGACCCATTCCAGCTTaGGTCTCTTGGTTGGAAGTTCTACTTTTGCTTCCA +
Preference number: 6 (lower is better)
Translates to: SLDPCTHRPIPA*VSWLEVLLLLP
Trigger: TGGAAGCAAAAGTAGAACTTCCAACCAAGAGACTCAAGCTGGAATGGGTCTATGGGTACAGGGGTCGAGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000554479.5
ENST00000555277.1
ENST00000556714.5
ENST00000649352.1
CDS GCA 72 bp CCAGTGTGCCATCTCTTAACATACAAAGTGCAAAAATaGCACCCTCATGGGCCCCCTGAACTGCATAGCTTA +
Preference number: 6 (lower is better)
Translates to: PVCHLLTYKVQK*HPHGPPELHSL
Trigger: TAAGCTATGCAGTTCAGGGGGCCCATGAGGGTGGCATTTTTGCACTTTGTATGTTAAGAGATGGCACACTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000554111.1
ENST00000554386.1
ENST00000649352.1
CDS CCA 72 bp TTACCGAAACAAAAAGTTGGCATGCGCGGGGGTGTGTaGGGAAGTGTGAAAGTCTGTGAATCACTGTTTAGC +
Preference number: 6 (lower is better)
Translates to: LPKQKVGMRGGV*GSVKVCESLFS
Trigger: GCTAAACAGTGATTCACAGACTTTCACACTTCCCCACACACCCCCGCGCATGCCAACTTTTTGTTTCGGTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000327921.13
CDS GCA 72 bp ACAGCTTTCTGGATGTTGAAATCGCAGATAAGACGTTaGAGGCCTGACTCAAGGGCTGTTAAATCTCAAGGC +
Preference number: 6 (lower is better)
Translates to: TAFWMLKSQIRR*RPDSRAVKSQG
Trigger: GCCTTGAGATTTAACAGCCCTTGAGTCAGGCCTGCAACGTCTTATCTGCGATTTCAACATCCAGAAAGCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553720.5
CDS CAA 90 bp GGGTCTATAAACCTCTCCGTGATCTTCTTCGCCTCTCCAATCTCATaGTACATCATTCTTCCCTTCACTTACTGTGCTCCAACCAGAGAA +
Preference number: 6 (lower is better)
Translates to: GSINLSVIFFASPIS*YIILPFTYCAPTRE
Trigger: TTCTCTGGTTGGAGCACAGTAAGTGAAGGGAAGAATGATGTACAATGAGATTGGAGAGGCGAAGAAGATCACGGAGAGGTTTATAGACCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556947.1
ENST00000649352.1
CDS CCA 72 bp TTTCCACAAGTAACTATGATGTTGGTGTCCGTGGGGTaGAAATCCGCAGCAAACACAGCTTCATTAGAGCAA +
Preference number: 6 (lower is better)
Translates to: FPQVTMMLVSVG*KSAANTASLEQ
Trigger: TTGCTCTAATGAAGCTGTGTTTGCTGCGGATTTCCACCCCACGGACACCAACATCATAGTTACTTGTGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554386.1
CDS CAA 72 bp AACCTCTCCGTGATCTTCTTCGCCTCTCCAATCTCATaGTACATCATTCTTCCCTTCACTTACTGTGCTCCA +
Preference number: 6 (lower is better)
Translates to: NLSVIFFASPIS*YIILPFTYCAP
Trigger: TGGAGCACAGTAAGTGAAGGGAAGAATGATGTACAATGAGATTGGAGAGGCGAAGAAGATCACGGAGAGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000556947.1
ENST00000649352.1
CDS CAA 90 bp CTTGGTTGGAAGTTCTACTTTTGCTTCCAAGCTGTAAGAATCCACTaGATCTTTGGGCATGTACATGGTAACAGGGCGTCCACGAAGAAA +
Preference number: 6 (lower is better)
Translates to: LGWKFYFCFQAVRIH*IFGHVHGNRASTKK
Trigger: TTTCTTCGTGGACGCCCTGTTACCATGTACATGCCCAAAGATCAAGTGGATTCTTACAGCTTGGAAGCAAAAGTAGAACTTCCAACCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000554479.5
ENST00000555277.1
ENST00000556714.5
ENST00000649352.1
CDS CAA 72 bp AAGTTCTACTTTTGCTTCCAAGCTGTAAGAATCCACTaGATCTTTGGGCATGTACATGGTAACAGGGCGTCC +
Preference number: 6 (lower is better)
Translates to: KFYFCFQAVRIH*IFGHVHGNRAS
Trigger: GGACGCCCTGTTACCATGTACATGCCCAAAGATCAAGTGGATTCTTACAGCTTGGAAGCAAAAGTAGAACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000554479.5
ENST00000555277.1
ENST00000556714.5
ENST00000649352.1
CDS CAA 72 bp AGCACATGGTCGTTGGAGTCATCCACAGCACAGAGATaGGTTCCTCCATTAGATTTTGAGAATGCAATACAG +
Preference number: 6 (lower is better)
Translates to: STWSLESSTAQR*VPPLDFENAIQ
Trigger: CTGTATTGCATTCTCAAAATCTAATGGAGGAACCAATCTCTGTGCTGTGGATGACTCCAACGACCATGTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000554479.5
ENST00000554553.5
ENST00000555812.5
ENST00000649352.1
CDS CCA 72 bp CGCCATATATATAGATGCAGTTGTCATGTGAGCCTATaGCTAAGAAATTCCCATCTGGTGAGTATCGCATTA +
Preference number: 6 (lower is better)
Translates to: RHIYRCSCHVSL*LRNSHLVSIAL
Trigger: TAATGCGATACTCACCAGATGGGAATTTCTTAGCCATAGGCTCACATGACAACTGCATCTATATATATGGCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000557313.5
ENST00000649352.1
CDS CAA 72 bp ACCAAACTGTTCTGGAATCTCCGTTTTACGAAGTTTTaGATAGTTTCCGCTCCAAGAAATGAGCTTTCGGTC +
Preference number: 6 (lower is better)
Translates to: TKLFWNLRFTKF*IVSAPRNELSV
Trigger: GACCGAAAGCTCATTTCTTGGAGCGGAAACTATCAAAAACTTCGTAAAACGGAGATTCCAGAACAGTTTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000554111.1
ENST00000649352.1
CDS CAA 72 bp CTTATTCGATTTGTACCTTTTCCCCATACTAAGATGTaGCCACTTGAATCTCCAGTAATGGTGTCACCGTTT +
Preference number: 6 (lower is better)
Translates to: LIRFVPFPHTKM*PLESPVMVSPF
Trigger: AAACGGTGACACCATTACTGGAGATTCAAGTGGCAACATCTTAGTATGGGGAAAAGGTACAAATCGAATAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000262233.11
ENST00000327921.13
ENST00000334192.8
ENST00000554111.1
ENST00000554386.1
ENST00000555812.5
ENST00000649352.1