RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EMILIN3 (Homo sapiens)

Ensembl gene IDs: ENSG00000183798

Ensembl transcript IDs: ENST00000332312.4

Found 279 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGCCGAGGGGACAAGGAACAGAAGCCACCAAGGGCTGTGGACTGTTaGTTGTGGGCACAGGGCAATGCGGACAGGCCACTGGCTGTGGGC +
Preference number: 1 (lower is better)
Translates to: SRGDKEQKPPRAVDC*LWAQGNADRPLAVG
Trigger: GCCCACAGCCAGTGGCCTGTCCGCATTGCCCTGTGCCCACAAGCAACAGTCCACAGCCCTTGGTGGCTTCTGTTCCTTGTCCCCTCGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332312.4
3UTR CCA 90 bp CCCTCAGTGGCCTCCTTAGTGCCATTTGGGCTAGCCAGGGAAGGCTaGAAGGCGCTGCTGGATAAGGCTGGGCTCTGGGGTGATGTTCCC +
Preference number: 1 (lower is better)
Translates to: PSVASLVPFGLAREG*KALLDKAGLWGDVP
Trigger: GGGAACATCACCCCAGAGCCCAGCCTTATCCAGCAGCGCCTTCCAGCCTTCCCTGGCTAGCCCAAATGGCACTAAGGAGGCCACTGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332312.4
3UTR CCA 90 bp GTGGAGGGCAGAATACCAAATGTCCAGGAACCAAAGGCAGGGCTGTaGGGACCTGAAGAGCAGCACAGTGGGGCCCGTGCTGCTGTGGGG +
Preference number: 1 (lower is better)
Translates to: VEGRIPNVQEPKAGL*GPEEQHSGARAAVG
Trigger: CCCCACAGCAGCACGGGCCCCACTGTGCTGCTCTTCAGGTCCCCACAGCCCTGCCTTTGGTTCCTGGACATTTGGTATTCTGCCCTCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332312.4
3UTR CCA 90 bp CGAAGAGAAGCCGAGGGGACAAGGAACAGAAGCCACCAAGGGCTGTaGACTGTTGCTTGTGGGCACAGGGCAATGCGGACAGGCCACTGG +
Preference number: 1 (lower is better)
Translates to: RREAEGTRNRSHQGL*TVACGHRAMRTGHW
Trigger: CCAGTGGCCTGTCCGCATTGCCCTGTGCCCACAAGCAACAGTCCACAGCCCTTGGTGGCTTCTGTTCCTTGTCCCCTCGGCTTCTCTTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332312.4
3UTR CCA 90 bp CGCTGTCCGGAACTGTCCAGTTTCTGCAGCACTGTGCATGGGTTTTaGTGGCTGGGACAGCCACGTGGAGGATTCCCTCAGTGGCCTCCT +
Preference number: 1 (lower is better)
Translates to: RCPELSSFCSTVHGF*WLGQPRGGFPQWPP
Trigger: AGGAGGCCACTGAGGGAATCCTCCACGTGGCTGTCCCAGCCACCAAAACCCATGCACAGTGCTGCAGAAACTGGACAGTTCCGGACAGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332312.4
3UTR GCA 90 bp CTTGCCTTGACCGCTGTCCGGAACTGTCCAGTTTCTGCAGCACTGTaGATGGGTTTTGGTGGCTGGGACAGCCACGTGGAGGATTCCCTC +
Preference number: 1 (lower is better)
Translates to: LALTAVRNCPVSAAL*MGFGGWDSHVEDSL
Trigger: GAGGGAATCCTCCACGTGGCTGTCCCAGCCACCAAAACCCATGCACAGTGCTGCAGAAACTGGACAGTTCCGGACAGCGGTCAAGGCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332312.4
3UTR CCA 90 bp CGGAACTGTCCAGTTTCTGCAGCACTGTGCATGGGTTTTGGTGGCTaGGACAGCCACGTGGAGGATTCCCTCAGTGGCCTCCTTAGTGCC +
Preference number: 1 (lower is better)
Translates to: RNCPVSAALCMGFGG*DSHVEDSLSGLLSA
Trigger: GGCACTAAGGAGGCCACTGAGGGAATCCTCCACGTGGCTGTCCCAGCCACCAAAACCCATGCACAGTGCTGCAGAAACTGGACAGTTCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332312.4
3UTR GCA 90 bp GTTCCAGTGGGCATCACCTTCCTGCACAAACCTAGTCCTGATGGCTaGGAAGAGAAGCCGAGGGGACAAGGAACAGAAGCCACCAAGGGC +
Preference number: 1 (lower is better)
Translates to: VPVGITFLHKPSPDG*EEKPRGQGTEATKG
Trigger: GCCCTTGGTGGCTTCTGTTCCTTGTCCCCTCGGCTTCTCTTCGCAGCCATCAGGACTAGGTTTGTGCAGGAAGGTGATGCCCACTGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332312.4
3UTR CCA 90 bp TTTCTGCAGCACTGTGCATGGGTTTTGGTGGCTGGGACAGCCACGTaGAGGATTCCCTCAGTGGCCTCCTTAGTGCCATTTGGGCTAGCC +
Preference number: 1 (lower is better)
Translates to: FLQHCAWVLVAGTAT*RIPSVASLVPFGLA
Trigger: GGCTAGCCCAAATGGCACTAAGGAGGCCACTGAGGGAATCCTCCACGTGGCTGTCCCAGCCACCAAAACCCATGCACAGTGCTGCAGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332312.4
3UTR TCA 90 bp ACAGTGGAATGTGAACTCTCTCAAGTCTACCCTGGCCTTCAAGCATaGCATCCTTGCCTTGACCGCTGTCCGGAACTGTCCAGTTTCTGC +
Preference number: 1 (lower is better)
Translates to: TVECELSQVYPGLQA*HPCLDRCPELSSFC
Trigger: GCAGAAACTGGACAGTTCCGGACAGCGGTCAAGGCAAGGATGTCATGCTTGAAGGCCAGGGTAGACTTGAGAGAGTTCACATTCCACTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
3UTR TCA 90 bp CTCTTGGCTGAGTCTTTGTGCTTCTGTTCTGTCCTGAAGGACACGTaGGGAGCCAGAAACATCTGGCAGCCTCTGGTCCTTAGTTCAGAT +
Preference number: 1 (lower is better)
Translates to: LLAESLCFCSVLKDT*GARNIWQPLVLSSD
Trigger: ATCTGAACTAAGGACCAGAGGCTGCCAGATGTTTCTGGCTCCTCACGTGTCCTTCAGGACAGAACAGAAGCACAAAGACTCAGCCAAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
3UTR CAA 90 bp CGAGGGGACAAGGAACAGAAGCCACCAAGGGCTGTGGACTGTTGCTaGTGGGCACAGGGCAATGCGGACAGGCCACTGGCTGTGGGCCTG +
Preference number: 2 (lower is better)
Translates to: RGDKEQKPPRAVDCC*WAQGNADRPLAVGL
Trigger: CAGGCCCACAGCCAGTGGCCTGTCCGCATTGCCCTGTGCCCACAAGCAACAGTCCACAGCCCTTGGTGGCTTCTGTTCCTTGTCCCCTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332312.4
3UTR CAA 90 bp AAGCCGAGGGGACAAGGAACAGAAGCCACCAAGGGCTGTGGACTGTaGCTTGTGGGCACAGGGCAATGCGGACAGGCCACTGGCTGTGGG +
Preference number: 2 (lower is better)
Translates to: KPRGQGTEATKGCGL*LVGTGQCGQATGCG
Trigger: CCCACAGCCAGTGGCCTGTCCGCATTGCCCTGTGCCCACAAGCAACAGTCCACAGCCCTTGGTGGCTTCTGTTCCTTGTCCCCTCGGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332312.4
3UTR-3UTR CCA 90 bp GCTTGTGGGCACAGGGCAATGCGGACAGGCCACTGGCTGTGGGCCTGTAGGTCTTGTTCCCCGAGTTGGTaGGATCTAGGGGTTGGGTCC +
Preference number: 2 (lower is better)
Translates to: ACGHRAMRTGHWLWACRSCSPSW*DLGVGS
Trigger: GGACCCAACCCCTAGATCCCACCAACTCGGGGAACA...AGACCTACAGGCCCACAGCCAGTGGCCTGTCCGCATTGCCCTGTGCCCACAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332312.4
3UTR CAA 90 bp CCGCTGTCCGGAACTGTCCAGTTTCTGCAGCACTGTGCATGGGTTTaGGTGGCTGGGACAGCCACGTGGAGGATTCCCTCAGTGGCCTCC +
Preference number: 2 (lower is better)
Translates to: PLSGTVQFLQHCAWV*VAGTATWRIPSVAS
Trigger: GGAGGCCACTGAGGGAATCCTCCACGTGGCTGTCCCAGCCACCAAAACCCATGCACAGTGCTGCAGAAACTGGACAGTTCCGGACAGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
3UTR-3UTR GCA 90 bp TGCGAAGAGAAGCCGAGGGGACAAGGAACAGAAGCCACCAAGGGCTGTGGACTGGTGGGCACAGGGCAATaGGGACAGGCCACTGGCTGT +
Preference number: 2 (lower is better)
Translates to: CEEKPRGQGTEATKGCGLVGTGQ*GQATGC
Trigger: ACAGCCAGTGGCCTGTCCGCATTGCCCTGTGCCCAC...CAGTCCACAGCCCTTGGTGGCTTCTGTTCCTTGTCCCCTCGGCTTCTCTTCGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332312.4
3UTR-3UTR CCA 90 bp GCTTGTGGGCACAGGGCAATGCGGACAGGCCACTGGCTGTGGGCCTGTAGGTCTCTGCAGCACTGTGCATaGGTTTTGGTGGCTGGGACA +
Preference number: 2 (lower is better)
Translates to: ACGHRAMRTGHWLWACRSLQHCA*VLVAGT
Trigger: TGTCCCAGCCACCAAAACCCATGCACAGTGCTGCAG...AGACCTACAGGCCCACAGCCAGTGGCCTGTCCGCATTGCCCTGTGCCCACAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332312.4
3UTR-3UTR GCA 90 bp GACAAGGAACAGAAGCCACCAAGGGCTGTGGACTGTTGCTTGTGGGCACAGGGCGAGGCTGGTGCTGACTaGCTGCAGGGTCCTCTCAAG +
Preference number: 2 (lower is better)
Translates to: DKEQKPPRAVDCCLWAQGEAGAD*LQGPLK
Trigger: CTTGAGAGGACCCTGCAGGCAGTCAGCACCAGCCTC...GCCCTGTGCCCACAAGCAACAGTCCACAGCCCTTGGTGGCTTCTGTTCCTTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
3UTR-3UTR TCA 90 bp ACTGAGGCTGGGAGCCTCAGCAGAGACCGGTGTCAAGAGTCTCTGGGAACTGCACCTGGCCTTCAAGCATaGCATCCTTGCCTTGACCGC +
Preference number: 2 (lower is better)
Translates to: TEAGSLSRDRCQESLGTAPGLQA*HPCLDR
Trigger: GCGGTCAAGGCAAGGATGTCATGCTTGAAGGCCAGG...TGCAGTTCCCAGAGACTCTTGACACCGGTCTCTGCTGAGGCTCCCAGCCTCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
3UTR-3UTR GCA 90 bp GGCATCACCTTCCTGCACAAACCTAGTCCTGATGGCTGCGAAGAGAAGCCGAGGAAGGCTGGAAGGCGCTaGTGGATAAGGCTGGGCTCT +
Preference number: 2 (lower is better)
Translates to: GITFLHKPSPDGCEEKPRKAGRR*WIRLGS
Trigger: AGAGCCCAGCCTTATCCAGCAGCGCCTTCCAGCCTT...CCTCGGCTTCTCTTCGCAGCCATCAGGACTAGGTTTGTGCAGGAAGGTGATGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
3UTR-3UTR CCA 90 bp ACTGAGGCTGGGAGCCTCAGCAGAGACCGGTGTCAAGAGTCTCTGGGAACTGCACTCCTTAGTGCCATTTaGGCTAGCCAGGGAAGGCTG +
Preference number: 2 (lower is better)
Translates to: TEAGSLSRDRCQESLGTALLSAI*ASQGRL
Trigger: CAGCCTTCCCTGGCTAGCCCAAATGGCACTAAGGAG...TGCAGTTCCCAGAGACTCTTGACACCGGTCTCTGCTGAGGCTCCCAGCCTCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
3UTR-3UTR CCA 90 bp TGCGAAGAGAAGCCGAGGGGACAAGGAACAGAAGCCACCAAGGGCTGTGGACTGATGGGTTTTGGTGGCTaGGACAGCCACGTGGAGGAT +
Preference number: 2 (lower is better)
Translates to: CEEKPRGQGTEATKGCGLMGFGG*DSHVED
Trigger: ATCCTCCACGTGGCTGTCCCAGCCACCAAAACCCAT...CAGTCCACAGCCCTTGGTGGCTTCTGTTCCTTGTCCCCTCGGCTTCTCTTCGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332312.4
3UTR-3UTR GCA 90 bp AAACCTAGTCCTGATGGCTGCGAAGAGAAGCCGAGGGGACAAGGAACAGAAGCCGGGCCTGTAGGTCTCTaGACAGTTGCTGAGGCTGGT +
Preference number: 2 (lower is better)
Translates to: KPSPDGCEEKPRGQGTEAGPVGL*TVAEAG
Trigger: ACCAGCCTCAGCAACTGTGCAGAGACCTACAGGCCC...GGCTTCTGTTCCTTGTCCCCTCGGCTTCTCTTCGCAGCCATCAGGACTAGGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332312.4
3UTR-3UTR CCA 90 bp TACCAAATGTCCAGGAACCAAAGGCAGGGCTGTGGGGACCTGAAGAGCAGCACAGATAAGGCTGGGCTCTaGGGTGATGTTCCCCGAGTT +
Preference number: 2 (lower is better)
Translates to: YQMSRNQRQGCGDLKSSTDKAGL*GDVPRV
Trigger: AACTCGGGGAACATCACCCCAGAGCCCAGCCTTATC...TGTGCTGCTCTTCAGGTCCCCACAGCCCTGCCTTTGGTTCCTGGACATTTGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332312.4
3UTR-3UTR CCA 90 bp AAACCTAGTCCTGATGGCTGCGAAGAGAAGCCGAGGGGACAAGGAACAGAAGCCACTGTGCATGGGTTTTaGTGGCTGGGACAGCCACGT +
Preference number: 2 (lower is better)
Translates to: KPSPDGCEEKPRGQGTEATVHGF*WLGQPR
Trigger: ACGTGGCTGTCCCAGCCACCAAAACCCATGCACAGT...GGCTTCTGTTCCTTGTCCCCTCGGCTTCTCTTCGCAGCCATCAGGACTAGGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332312.4
3UTR-3UTR TCA 90 bp AGGGGACAAGGAACAGAAGCCACCAAGGGCTGTGGACTGTTGCTTGTGGGCACACTTACATACGGACACTaGTCAAGGCCAGTTTGCCAC +
Preference number: 2 (lower is better)
Translates to: RGQGTEATKGCGLLLVGTLTYGH*SRPVCH
Trigger: GTGGCAAACTGGCCTTGATCAGTGTCCGTATGTAAG...TGTGCCCACAAGCAACAGTCCACAGCCCTTGGTGGCTTCTGTTCCTTGTCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332312.4
3UTR-3UTR GCA 90 bp ACTGAGGCTGGGAGCCTCAGCAGAGACCGGTGTCAAGAGTCTCTGGGAACTGCAGAACTGTCCAGTTTCTaGAGCACTGTGCATGGGTTT +
Preference number: 2 (lower is better)
Translates to: TEAGSLSRDRCQESLGTAELSSF*STVHGF
Trigger: AAACCCATGCACAGTGCTGCAGAAACTGGACAGTTC...TGCAGTTCCCAGAGACTCTTGACACCGGTCTCTGCTGAGGCTCCCAGCCTCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
3UTR-3UTR CCA 90 bp CTTAGTTCAGATACAACATCCATGAAGCTGCCAGGTGTGAGGAGAGTTCCAGTGGCTGGAAGGCGCTGCTaGATAAGGCTGGGCTCTGGG +
Preference number: 2 (lower is better)
Translates to: LSSDTTSMKLPGVRRVPVAGRRC*IRLGSG
Trigger: CCCAGAGCCCAGCCTTATCCAGCAGCGCCTTCCAGC...CACTGGAACTCTCCTCACACCTGGCAGCTTCATGGATGTTGTATCTGAACTAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
3UTR CAA 90 bp AACTCTCTCAAGTCTACCCTGGCCTTCAAGCATGACATCCTTGCCTaGACCGCTGTCCGGAACTGTCCAGTTTCTGCAGCACTGTGCATG +
Preference number: 2 (lower is better)
Translates to: NSLKSTLAFKHDILA*TAVRNCPVSAALCM
Trigger: CATGCACAGTGCTGCAGAAACTGGACAGTTCCGGACAGCGGTCAAGGCAAGGATGTCATGCTTGAAGGCCAGGGTAGACTTGAGAGAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
3UTR-3UTR TCA 90 bp GACAAGGAACAGAAGCCACCAAGGGCTGTGGACTGTTGCTTGTGGGCACAGGGCCAGACACTGATTTGCTaGCAGTGGAATGTGAACTCT +
Preference number: 2 (lower is better)
Translates to: DKEQKPPRAVDCCLWAQGQTLIC*QWNVNS
Trigger: AGAGTTCACATTCCACTGTCAGCAAATCAGTGTCTG...GCCCTGTGCCCACAAGCAACAGTCCACAGCCCTTGGTGGCTTCTGTTCCTTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
3UTR-3UTR CCA 90 bp GCTGGCTGTCCAGACACTGATTTGCTGACAGTGGAATGTGAACTCTCTCAAGTCCTAGCCAGGGAAGGCTaGAAGGCGCTGCTGGATAAG +
Preference number: 2 (lower is better)
Translates to: AGCPDTDLLTVECELSQVLAREG*KALLDK
Trigger: CTTATCCAGCAGCGCCTTCCAGCCTTCCCTGGCTAG...GACTTGAGAGAGTTCACATTCCACTGTCAGCAAATCAGTGTCTGGACAGCCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
3UTR-3UTR TCA 90 bp GCTGGCTGTCCAGACACTGATTTGCTGACAGTGGAATGTGAACTCTCTCAAGTCATGACATCCTTGCCTTaGCCGCTGTCCGGAACTGTC +
Preference number: 2 (lower is better)
Translates to: AGCPDTDLLTVECELSQVMTSLP*PLSGTV
Trigger: GACAGTTCCGGACAGCGGTCAAGGCAAGGATGTCAT...GACTTGAGAGAGTTCACATTCCACTGTCAGCAAATCAGTGTCTGGACAGCCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
3UTR-3UTR GCA 90 bp CTTAGTTCAGATACAACATCCATGAAGCTGCCAGGTGTGAGGAGAGTTCCAGTGCCTAGTCCTGATGGCTaGGAAGAGAAGCCGAGGGGA +
Preference number: 2 (lower is better)
Translates to: LSSDTTSMKLPGVRRVPVPSPDG*EEKPRG
Trigger: TCCCCTCGGCTTCTCTTCGCAGCCATCAGGACTAGG...CACTGGAACTCTCCTCACACCTGGCAGCTTCATGGATGTTGTATCTGAACTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332312.4
3UTR-3UTR CCA 90 bp TACTCTGATAGTACCAGAGTGGAGGGCAGAATACCAAATGTCCAGGAACCAAAGGGAGCCAGAAACATCTaGCAGCCTCTGGTCCTTAGT +
Preference number: 2 (lower is better)
Translates to: YSDSTRVEGRIPNVQEPKGARNI*QPLVLS
Trigger: ACTAAGGACCAGAGGCTGCCAGATGTTTCTGGCTCC...CTTTGGTTCCTGGACATTTGGTATTCTGCCCTCCACTCTGGTACTATCAGAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
3UTR-3UTR CCA 90 bp TACTCTGATAGTACCAGAGTGGAGGGCAGAATACCAAATGTCCAGGAACCAAAGCTCTCAAGTCTACCCTaGCCTTCAAGCATGACATCC +
Preference number: 2 (lower is better)
Translates to: YSDSTRVEGRIPNVQEPKLSSLP*PSSMTS
Trigger: GGATGTCATGCTTGAAGGCCAGGGTAGACTTGAGAG...CTTTGGTTCCTGGACATTTGGTATTCTGCCCTCCACTCTGGTACTATCAGAGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
3UTR GCA 72 bp AAGGGCTGTGGACTGTTGCTTGTGGGCACAGGGCAATaGGGACAGGCCACTGGCTGTGGGCCTGTAGGTCTC +
Preference number: 3 (lower is better)
Translates to: KGCGLLLVGTGQ*GQATGCGPVGL
Trigger: GAGACCTACAGGCCCACAGCCAGTGGCCTGTCCGCATTGCCCTGTGCCCACAAGCAACAGTCCACAGCCCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
3UTR CCA 72 bp GCCTCCTTAGTGCCATTTGGGCTAGCCAGGGAAGGCTaGAAGGCGCTGCTGGATAAGGCTGGGCTCTGGGGT +
Preference number: 3 (lower is better)
Translates to: ASLVPFGLAREG*KALLDKAGLWG
Trigger: ACCCCAGAGCCCAGCCTTATCCAGCAGCGCCTTCCAGCCTTCCCTGGCTAGCCCAAATGGCACTAAGGAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332312.4
3UTR CCA 72 bp GTGGAGGATTCCCTCAGTGGCCTCCTTAGTGCCATTTaGGCTAGCCAGGGAAGGCTGGAAGGCGCTGCTGGA +
Preference number: 3 (lower is better)
Translates to: VEDSLSGLLSAI*ASQGRLEGAAG
Trigger: TCCAGCAGCGCCTTCCAGCCTTCCCTGGCTAGCCCAAATGGCACTAAGGAGGCCACTGAGGGAATCCTCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
3UTR CCA 72 bp GAACAGAAGCCACCAAGGGCTGTGGACTGTTGCTTGTaGGCACAGGGCAATGCGGACAGGCCACTGGCTGTG +
Preference number: 3 (lower is better)
Translates to: EQKPPRAVDCCL*AQGNADRPLAV
Trigger: CACAGCCAGTGGCCTGTCCGCATTGCCCTGTGCCCACAAGCAACAGTCCACAGCCCTTGGTGGCTTCTGTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
3UTR CCA 72 bp GCCGAGGGGACAAGGAACAGAAGCCACCAAGGGCTGTaGACTGTTGCTTGTGGGCACAGGGCAATGCGGACA +
Preference number: 3 (lower is better)
Translates to: AEGTRNRSHQGL*TVACGHRAMRT
Trigger: TGTCCGCATTGCCCTGTGCCCACAAGCAACAGTCCACAGCCCTTGGTGGCTTCTGTTCCTTGTCCCCTCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332312.4
3UTR-3UTR CAA 90 bp GGCATCACCTTCCTGCACAAACCTAGTCCTGATGGCTGCGAAGAGAAGCCGAGGGTGATGTTCCCCGAGTaGGTGGGATCTAGGGGTTGG +
Preference number: 3 (lower is better)
Translates to: GITFLHKPSPDGCEEKPRVMFPE*VGSRGW
Trigger: CCAACCCCTAGATCCCACCAACTCGGGGAACATCAC...CCTCGGCTTCTCTTCGCAGCCATCAGGACTAGGTTTGTGCAGGAAGGTGATGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332312.4
3UTR GCA 72 bp CCTTGCCTTGACCGCTGTCCGGAACTGTCCAGTTTCTaGAGCACTGTGCATGGGTTTTGGTGGCTGGGACAG +
Preference number: 3 (lower is better)
Translates to: PCLDRCPELSSF*STVHGFWWLGQ
Trigger: CTGTCCCAGCCACCAAAACCCATGCACAGTGCTGCAGAAACTGGACAGTTCCGGACAGCGGTCAAGGCAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332312.4
3UTR-3UTR CAA 90 bp AGGGGACAAGGAACAGAAGCCACCAAGGGCTGTGGACTGTTGCTTGTGGGCACACATGACATCCTTGCCTaGACCGCTGTCCGGAACTGT +
Preference number: 3 (lower is better)
Translates to: RGQGTEATKGCGLLLVGTHDILA*TAVRNC
Trigger: ACAGTTCCGGACAGCGGTCAAGGCAAGGATGTCATG...TGTGCCCACAAGCAACAGTCCACAGCCCTTGGTGGCTTCTGTTCCTTGTCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332312.4
3UTR GCA 72 bp GGCATCACCTTCCTGCACAAACCTAGTCCTGATGGCTaGGAAGAGAAGCCGAGGGGACAAGGAACAGAAGCC +
Preference number: 3 (lower is better)
Translates to: GITFLHKPSPDG*EEKPRGQGTEA
Trigger: GGCTTCTGTTCCTTGTCCCCTCGGCTTCTCTTCGCAGCCATCAGGACTAGGTTTGTGCAGGAAGGTGATGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332312.4
3UTR CCA 72 bp CTGTCCGGAACTGTCCAGTTTCTGCAGCACTGTGCATaGGTTTTGGTGGCTGGGACAGCCACGTGGAGGATT +
Preference number: 3 (lower is better)
Translates to: LSGTVQFLQHCA*VLVAGTATWRI
Trigger: AATCCTCCACGTGGCTGTCCCAGCCACCAAAACCCATGCACAGTGCTGCAGAAACTGGACAGTTCCGGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332312.4
3UTR TCA 72 bp TGTGAACTCTCTCAAGTCTACCCTGGCCTTCAAGCATaGCATCCTTGCCTTGACCGCTGTCCGGAACTGTCC +
Preference number: 3 (lower is better)
Translates to: CELSQVYPGLQA*HPCLDRCPELS
Trigger: GGACAGTTCCGGACAGCGGTCAAGGCAAGGATGTCATGCTTGAAGGCCAGGGTAGACTTGAGAGAGTTCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
3UTR TCA 72 bp CAGGCCCTGCAGCTGGCTGTCCAGACACTGATTTGCTaGCAGTGGAATGTGAACTCTCTCAAGTCTACCCTG +
Preference number: 3 (lower is better)
Translates to: QALQLAVQTLIC*QWNVNSLKSTL
Trigger: CAGGGTAGACTTGAGAGAGTTCACATTCCACTGTCAGCAAATCAGTGTCTGGACAGCCAGCTGCAGGGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
3UTR TCA 72 bp GAGTCTTTGTGCTTCTGTTCTGTCCTGAAGGACACGTaGGGAGCCAGAAACATCTGGCAGCCTCTGGTCCTT +
Preference number: 3 (lower is better)
Translates to: ESLCFCSVLKDT*GARNIWQPLVL
Trigger: AAGGACCAGAGGCTGCCAGATGTTTCTGGCTCCTCACGTGTCCTTCAGGACAGAACAGAAGCACAAAGACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
3UTR-3UTR CAA 90 bp TACCAAATGTCCAGGAACCAAAGGCAGGGCTGTGGGGACCTGAAGAGCAGCACAACATGCATTTTCAAGTaGTCCATTGATGGTTTCGTA +
Preference number: 3 (lower is better)
Translates to: YQMSRNQRQGCGDLKSSTTCIFK*SIDGFV
Trigger: TACGAAACCATCAATGGACAACTTGAAAATGCATGT...TGTGCTGCTCTTCAGGTCCCCACAGCCCTGCCTTTGGTTCCTGGACATTTGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR CCA 90 bp GCTTGTGGGCACAGGGCAATGCGGACAGGCCACTGGCTGTGGGCCTGTAGGTCTTCTGCCAGCTGTCCCTaGACCTCGGCCACAGTGCCA +
Preference number: 4 (lower is better)
Translates to: ACGHRAMRTGHWLWACRSSASCP*TSATVP
Trigger: TGGCACTGTGGCCGAGGTCCAGGGACAGCTGGCAGA...AGACCTACAGGCCCACAGCCAGTGGCCTGTCCGCATTGCCCTGTGCCCACAAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR CCA 90 bp GCTTGTGGGCACAGGGCAATGCGGACAGGCCACTGGCTGTGGGCCTGTAGGTCTGCCAGCCTGTCTAGTTaGCTTGCCCTGGCCGCACCT +
Preference number: 4 (lower is better)
Translates to: ACGHRAMRTGHWLWACRSASLSS*LALAAP
Trigger: AGGTGCGGCCAGGGCAAGCCAACTAGACAGGCTGGC...AGACCTACAGGCCCACAGCCAGTGGCCTGTCCGCATTGCCCTGTGCCCACAAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR TCA 90 bp GTGGAGGATTCCCTCAGTGGCCTCCTTAGTGCCATTTGGGCTAGCCAGGGAAGGTACAAGGGGCCGAGCTaGCCTGCCCGGAGAGGCGCT +
Preference number: 4 (lower is better)
Translates to: VEDSLSGLLSAIWASQGRYKGPS*PARRGA
Trigger: AGCGCCTCTCCGGGCAGGTCAGCTCGGCCCCTTGTA...CCTTCCCTGGCTAGCCCAAATGGCACTAAGGAGGCCACTGAGGGAATCCTCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR GCA 90 bp GTGGAGGATTCCCTCAGTGGCCTCCTTAGTGCCATTTGGGCTAGCCAGGGAAGGCCATCAAGGCTCTGGTaGAGCCTCCGGCTGGCGGCC +
Preference number: 4 (lower is better)
Translates to: VEDSLSGLLSAIWASQGRPSRLW*SLRLAA
Trigger: GGCCGCCAGCCGGAGGCTGCACCAGAGCCTTGATGG...CCTTCCCTGGCTAGCCCAAATGGCACTAAGGAGGCCACTGAGGGAATCCTCCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR GCA 90 bp GCTTGTGGGCACAGGGCAATGCGGACAGGCCACTGGCTGTGGGCCTGTAGGTCTCCAGGCCTTCACCTCTaGCACGAGGCTGTCCAGGAT +
Preference number: 4 (lower is better)
Translates to: ACGHRAMRTGHWLWACRSPGLHL*HEAVQD
Trigger: ATCCTGGACAGCCTCGTGGCAGAGGTGAAGGCCTGG...AGACCTACAGGCCCACAGCCAGTGGCCTGTCCGCATTGCCCTGTGCCCACAAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR GCA 90 bp GCTTGTGGGCACAGGGCAATGCGGACAGGCCACTGGCTGTGGGCCTGTAGGTCTGAGGCTGGTGCTGACTaGCTGCAGGGTCCTCTCAAG +
Preference number: 4 (lower is better)
Translates to: ACGHRAMRTGHWLWACRSEAGAD*LQGPLK
Trigger: CTTGAGAGGACCCTGCAGGCAGTCAGCACCAGCCTC...AGACCTACAGGCCCACAGCCAGTGGCCTGTCCGCATTGCCCTGTGCCCACAAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR CCA 90 bp GCTTGTGGGCACAGGGCAATGCGGACAGGCCACTGGCTGTGGGCCTGTAGGTCTGTGTTAGTGGCCCTCTaGCTCTGTCTCCTGGGCCCA +
Preference number: 4 (lower is better)
Translates to: ACGHRAMRTGHWLWACRSVLVAL*LCLLGP
Trigger: TGGGCCCAGGAGACAGAGCCAGAGGGCCACTAACAC...AGACCTACAGGCCCACAGCCAGTGGCCTGTCCGCATTGCCCTGTGCCCACAAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR CCA 90 bp TGCGAAGAGAAGCCGAGGGGACAAGGAACAGAAGCCACCAAGGGCTGTGGACTGCGGCCATCAAGGCTCTaGTGCAGCCTCCGGCTGGCG +
Preference number: 4 (lower is better)
Translates to: CEEKPRGQGTEATKGCGLRPSRL*CSLRLA
Trigger: CGCCAGCCGGAGGCTGCACCAGAGCCTTGATGGCCG...CAGTCCACAGCCCTTGGTGGCTTCTGTTCCTTGTCCCCTCGGCTTCTCTTCGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR CCA 90 bp GAAGCCGAGGGGACAAGGAACAGAAGCCACCAAGGGCTGTGGACTGTTGCTTGTGCGTGGCTGGCCACCTaGCGTAGGAGGGCCTCGCTC +
Preference number: 4 (lower is better)
Translates to: EAEGTRNRSHQGLWTVACAWLAT*RRRASL
Trigger: GAGCGAGGCCCTCCTACGCCAGGTGGCCAGCCACGC...ACAAGCAACAGTCCACAGCCCTTGGTGGCTTCTGTTCCTTGTCCCCTCGGCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR CCA 90 bp ACTGGCTGTGGGCCTGTAGGTCTCTGCACAGTTGCTGAGGCTGGTGCTGACTGCAGCGGCTCAGCCCACTaGCCACCTTGGCCACACCAG +
Preference number: 4 (lower is better)
Translates to: TGCGPVGLCTVAEAGADCSGSAH*PPWPHQ
Trigger: CTGGTGTGGCCAAGGTGGCCAGTGGGCTGAGCCGCT...GCAGTCAGCACCAGCCTCAGCAACTGTGCAGAGACCTACAGGCCCACAGCCAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR CCA 90 bp GCTTGTGGGCACAGGGCAATGCGGACAGGCCACTGGCTGTGGGCCTGTAGGTCTACAGGCCACTGGCTGTaGGCCTGTAGGTCTCTGCAC +
Preference number: 4 (lower is better)
Translates to: ACGHRAMRTGHWLWACRSTGHWL*ACRSLH
Trigger: GTGCAGAGACCTACAGGCCCACAGCCAGTGGCCTGT...AGACCTACAGGCCCACAGCCAGTGGCCTGTCCGCATTGCCCTGTGCCCACAAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR TCA 90 bp ACTGAGGCTGGGAGCCTCAGCAGAGACCGGTGTCAAGAGTCTCTGGGAACTGCACAGCCCCATGGTCCGTaGGGTGCTCAGGGCAGCGTT +
Preference number: 4 (lower is better)
Translates to: TEAGSLSRDRCQESLGTAQPHGP*GAQGSV
Trigger: AACGCTGCCCTGAGCACCTCACGGACCATGGGGCTG...TGCAGTTCCCAGAGACTCTTGACACCGGTCTCTGCTGAGGCTCCCAGCCTCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR TCA 90 bp TCTACCCTGGCCTTCAAGCATGACATCCTTGCCTTGACCGCTGTCCGGAACTGTCTCCGGCTGGCGGCCTaGCCCTCCTCACATTGCCGC +
Preference number: 4 (lower is better)
Translates to: STLAFKHDILALTAVRNCLRLAA*PSSHCR
Trigger: GCGGCAATGTGAGGAGGGTCAGGCCGCCAGCCGGAG...ACAGTTCCGGACAGCGGTCAAGGCAAGGATGTCATGCTTGAAGGCCAGGGTAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR TCA 90 bp GCTTGTGGGCACAGGGCAATGCGGACAGGCCACTGGCTGTGGGCCTGTAGGTCTCACCCTCTGTCCCATTaGGCGTCTCCAGACCCTCAA +
Preference number: 4 (lower is better)
Translates to: ACGHRAMRTGHWLWACRSHPLSH*ASPDPQ
Trigger: TTGAGGGTCTGGAGACGCTCAATGGGACAGAGGGTG...AGACCTACAGGCCCACAGCCAGTGGCCTGTCCGCATTGCCCTGTGCCCACAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR TCA 90 bp GACAAGGAACAGAAGCCACCAAGGGCTGTGGACTGTTGCTTGTGGGCACAGGGCGCTGTCCAGGATGGCTaGGGTGGTGCTCGGGGTGCA +
Preference number: 4 (lower is better)
Translates to: DKEQKPPRAVDCCLWAQGAVQDG*GGARGA
Trigger: TGCACCCCGAGCACCACCTCAGCCATCCTGGACAGC...GCCCTGTGCCCACAAGCAACAGTCCACAGCCCTTGGTGGCTTCTGTTCCTTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR GCA 90 bp AGGGGACAAGGAACAGAAGCCACCAAGGGCTGTGGACTGTTGCTTGTGGGCACAGCTTCCCGCAGCCGCTaGAGGTGGGCCTCATGGCCA +
Preference number: 4 (lower is better)
Translates to: RGQGTEATKGCGLLLVGTASRSR*RWASWP
Trigger: TGGCCATGAGGCCCACCTGCAGCGGCTGCGGGAAGC...TGTGCCCACAAGCAACAGTCCACAGCCCTTGGTGGCTTCTGTTCCTTGTCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR CCA 90 bp GGCATCACCTTCCTGCACAAACCTAGTCCTGATGGCTGCGAAGAGAAGCCGAGGCGCAGCCGCTGCAGGTaGGCCTCATGGCCAAGTGCC +
Preference number: 4 (lower is better)
Translates to: GITFLHKPSPDGCEEKPRRSRCR*ASWPSA
Trigger: GGCACTTGGCCATGAGGCCCACCTGCAGCGGCTGCG...CCTCGGCTTCTCTTCGCAGCCATCAGGACTAGGTTTGTGCAGGAAGGTGATGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR CCA 90 bp CATCCTTGCCTTGACCGCTGTCCGGAACTGTCCAGTTTCTGCAGCACTGTGCATGGTGAGCGGGGATGGTaGGGCTTCCCGCAGCCGCTG +
Preference number: 4 (lower is better)
Translates to: HPCLDRCPELSSFCSTVHGERGW*GFPQPL
Trigger: CAGCGGCTGCGGGAAGCCCCACCATCCCCGCTCACC...ATGCACAGTGCTGCAGAAACTGGACAGTTCCGGACAGCGGTCAAGGCAAGGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR CCA 90 bp ACTGAGGCTGGGAGCCTCAGCAGAGACCGGTGTCAAGAGTCTCTGGGAACTGCAGCCTCAGTGGCTCAGTaGGCAAGCTGTCCAGGCCCG +
Preference number: 4 (lower is better)
Translates to: TEAGSLSRDRCQESLGTAASVAQ*ASCPGP
Trigger: CGGGCCTGGACAGCTTGCCCACTGAGCCACTGAGGC...TGCAGTTCCCAGAGACTCTTGACACCGGTCTCTGCTGAGGCTCCCAGCCTCAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR GCA 90 bp TCTACCCTGGCCTTCAAGCATGACATCCTTGCCTTGACCGCTGTCCGGAACTGTGGGGCCGAGCTGACCTaGCCGGAGAGGCGCTGTCAT +
Preference number: 4 (lower is better)
Translates to: STLAFKHDILALTAVRNCGAELT*PERRCH
Trigger: ATGACAGCGCCTCTCCGGGCAGGTCAGCTCGGCCCC...ACAGTTCCGGACAGCGGTCAAGGCAAGGATGTCATGCTTGAAGGCCAGGGTAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR GCA 90 bp CATCCTTGCCTTGACCGCTGTCCGGAACTGTCCAGTTTCTGCAGCACTGTGCATCTGCTGGAGCAGTGCTaGGTGGCTGGCCACCTGGCG +
Preference number: 4 (lower is better)
Translates to: HPCLDRCPELSSFCSTVHLLEQC*VAGHLA
Trigger: CGCCAGGTGGCCAGCCACGCAGCACTGCTCCAGCAG...ATGCACAGTGCTGCAGAAACTGGACAGTTCCGGACAGCGGTCAAGGCAAGGATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR CCA 90 bp TGCGAAGAGAAGCCGAGGGGACAAGGAACAGAAGCCACCAAGGGCTGTGGACTGGGACAGCAGGAGCCCTaGGGCCACCAGTCATCCTGT +
Preference number: 4 (lower is better)
Translates to: CEEKPRGQGTEATKGCGLGQQEP*GHQSSC
Trigger: ACAGGATGACTGGTGGCCCCAGGGCTCCTGCTGTCC...CAGTCCACAGCCCTTGGTGGCTTCTGTTCCTTGTCCCCTCGGCTTCTCTTCGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR CCA 90 bp ACTGTGCATGGGTTTTGGTGGCTGGGACAGCCACGTGGAGGATTCCCTCAGTGGTGCAGGTGGGCCTCATaGCCAAGTGCCAGCCCATGC +
Preference number: 4 (lower is better)
Translates to: TVHGFWWLGQPRGGFPQWCRWAS*PSASPC
Trigger: GCATGGGCTGGCACTTGGCCATGAGGCCCACCTGCA...CCACTGAGGGAATCCTCCACGTGGCTGTCCCAGCCACCAAAACCCATGCACAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR CCA 90 bp CATCCTTGCCTTGACCGCTGTCCGGAACTGTCCAGTTTCTGCAGCACTGTGCATAGCTGTGACAGCTCCTaGCGCAGGGCCAGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: HPCLDRCPELSSFCSTVHSCDSS*RRASSR
Trigger: CCGGGAGCTGGCCCTGCGCCAGGAGCTGTCACAGCT...ATGCACAGTGCTGCAGAAACTGGACAGTTCCGGACAGCGGTCAAGGCAAGGATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR CCA 90 bp AAACCTAGTCCTGATGGCTGCGAAGAGAAGCCGAGGGGACAAGGAACAGAAGCCGCACCGGGGCCCCTTTaGGTCTCGGTGACTGCCTGC +
Preference number: 4 (lower is better)
Translates to: KPSPDGCEEKPRGQGTEAAPGPL*VSVTAC
Trigger: GCAGGCAGTCACCGAGACCCAAAGGGGCCCCGGTGC...GGCTTCTGTTCCTTGTCCCCTCGGCTTCTCTTCGCAGCCATCAGGACTAGGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR CCA 90 bp GGCATCACCTTCCTGCACAAACCTAGTCCTGATGGCTGCGAAGAGAAGCCGAGGCGAGGCTGTCCAGGATaGCTGAGGTGGTGCTCGGGG +
Preference number: 4 (lower is better)
Translates to: GITFLHKPSPDGCEEKPRRGCPG*LRWCSG
Trigger: CCCCGAGCACCACCTCAGCCATCCTGGACAGCCTCG...CCTCGGCTTCTCTTCGCAGCCATCAGGACTAGGTTTGTGCAGGAAGGTGATGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR CCA 90 bp GTGGAGGATTCCCTCAGTGGCCTCCTTAGTGCCATTTGGGCTAGCCAGGGAAGGGCTGGAAGGCGCTGCTaGATAAGGCTGGGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: VEDSLSGLLSAIWASQGRAGRRC*IRLGSG
Trigger: CCCAGAGCCCAGCCTTATCCAGCAGCGCCTTCCAGC...CCTTCCCTGGCTAGCCCAAATGGCACTAAGGAGGCCACTGAGGGAATCCTCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR CCA 90 bp GCTTGTGGGCACAGGGCAATGCGGACAGGCCACTGGCTGTGGGCCTGTAGGTCTCTCCTTCTCAGGGCCTaGCCTCATTCAGGCCACTTT +
Preference number: 4 (lower is better)
Translates to: ACGHRAMRTGHWLWACRSLLLRA*PHSGHF
Trigger: AAAGTGGCCTGAATGAGGCCAGGCCCTGAGAAGGAG...AGACCTACAGGCCCACAGCCAGTGGCCTGTCCGCATTGCCCTGTGCCCACAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR TCA 90 bp CATCCTTGCCTTGACCGCTGTCCGGAACTGTCCAGTTTCTGCAGCACTGTGCATGGCAGCGTTTCCCAGTaGAGCCGGGACAGCAACGCC +
Preference number: 4 (lower is better)
Translates to: HPCLDRCPELSSFCSTVHGSVSQ*SRDSNA
Trigger: GGCGTTGCTGTCCCGGCTTCACTGGGAAACGCTGCC...ATGCACAGTGCTGCAGAAACTGGACAGTTCCGGACAGCGGTCAAGGCAAGGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR TCA 90 bp ACTGAGGCTGGGAGCCTCAGCAGAGACCGGTGTCAAGAGTCTCTGGGAACTGCAGATCTCGCCTTGAAGTaGGCTGCCCGTCCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: TEAGSLSRDRCQESLGTADLALK*AARPFC
Trigger: GCAGAAGGGACGGGCAGCTCACTTCAAGGCGAGATC...TGCAGTTCCCAGAGACTCTTGACACCGGTCTCTGCTGAGGCTCCCAGCCTCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR GCA 90 bp GGCATCACCTTCCTGCACAAACCTAGTCCTGATGGCTGCGAAGAGAAGCCGAGGTGCCGCCGTACCTCCTaGACCCGCAGGTCACACTCA +
Preference number: 4 (lower is better)
Translates to: GITFLHKPSPDGCEEKPRCRRTS*TRRSHS
Trigger: TGAGTGTGACCTGCGGGTGCAGGAGGTACGGCGGCA...CCTCGGCTTCTCTTCGCAGCCATCAGGACTAGGTTTGTGCAGGAAGGTGATGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR GCA 90 bp GTGGAGGATTCCCTCAGTGGCCTCCTTAGTGCCATTTGGGCTAGCCAGGGAAGGTTGGGTCTCGGTGACTaGCTGCAGGGCCCTCTCAAG +
Preference number: 4 (lower is better)
Translates to: VEDSLSGLLSAIWASQGRLGLGD*LQGPLK
Trigger: CTTGAGAGGGCCCTGCAGGCAGTCACCGAGACCCAA...CCTTCCCTGGCTAGCCCAAATGGCACTAAGGAGGCCACTGAGGGAATCCTCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR GCA 90 bp TCTACCCTGGCCTTCAAGCATGACATCCTTGCCTTGACCGCTGTCCGGAACTGTGCTGCCCGTCCCTTCTaGCAGCTGTCCCTGGACCTC +
Preference number: 4 (lower is better)
Translates to: STLAFKHDILALTAVRNCAARPF*QLSLDL
Trigger: GAGGTCCAGGGACAGCTGGCAGAAGGGACGGGCAGC...ACAGTTCCGGACAGCGGTCAAGGCAAGGATGTCATGCTTGAAGGCCAGGGTAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR GCA 90 bp TGCGAAGAGAAGCCGAGGGGACAAGGAACAGAAGCCACCAAGGGCTGTGGACTGCCTTGGCTGCTGACCTaGTCCTGGATGGCCTGGACT +
Preference number: 4 (lower is better)
Translates to: CEEKPRGQGTEATKGCGLPWLLT*SWMAWT
Trigger: AGTCCAGGCCATCCAGGAGCAGGTCAGCAGCCAAGG...CAGTCCACAGCCCTTGGTGGCTTCTGTTCCTTGTCCCCTCGGCTTCTCTTCGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR GCA 90 bp GACAAGGAACAGAAGCCACCAAGGGCTGTGGACTGTTGCTTGTGGGCACAGGGCACACCAGCCTTGAGTTaGTCCAGCTCCCCACGCAGG +
Preference number: 4 (lower is better)
Translates to: DKEQKPPRAVDCCLWAQGTPALS*SSSPRR
Trigger: CCTGCGTGGGGAGCTGGAGCAACTCAAGGCTGGTGT...GCCCTGTGCCCACAAGCAACAGTCCACAGCCCTTGGTGGCTTCTGTTCCTTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR GCA 90 bp ACTGGCTGTGGGCCTGTAGGTCTCTGCACAGTTGCTGAGGCTGGTGCTGACTGCAAGGCTGGAAGGCGCTaGTGGATAAGGCTGGGCTCT +
Preference number: 4 (lower is better)
Translates to: TGCGPVGLCTVAEAGADCKAGRR*WIRLGS
Trigger: AGAGCCCAGCCTTATCCAGCAGCGCCTTCCAGCCTT...GCAGTCAGCACCAGCCTCAGCAACTGTGCAGAGACCTACAGGCCCACAGCCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR GCA 90 bp ACTGGCTGTGGGCCTGTAGGTCTCTGCACAGTTGCTGAGGCTGGTGCTGACTGCCCTAGTCCTGATGGCTaGGAAGAGAAGCCGAGGGGA +
Preference number: 4 (lower is better)
Translates to: TGCGPVGLCTVAEAGADCPSPDG*EEKPRG
Trigger: TCCCCTCGGCTTCTCTTCGCAGCCATCAGGACTAGG...GCAGTCAGCACCAGCCTCAGCAACTGTGCAGAGACCTACAGGCCCACAGCCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR CCA 90 bp GTGGAGGATTCCCTCAGTGGCCTCCTTAGTGCCATTTGGGCTAGCCAGGGAAGGCTGTTGGGATCCTCGTaGCTAGCCACCAGGCCACTG +
Preference number: 4 (lower is better)
Translates to: VEDSLSGLLSAIWASQGRLLGSS*LATRPL
Trigger: CAGTGGCCTGGTGGCTAGCCACGAGGATCCCAACAG...CCTTCCCTGGCTAGCCCAAATGGCACTAAGGAGGCCACTGAGGGAATCCTCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR CCA 90 bp GAAGCCGAGGGGACAAGGAACAGAAGCCACCAAGGGCTGTGGACTGTTGCTTGTCCAGGATGGCTGAGGTaGTGCTCGGGGTGCACGAAG +
Preference number: 4 (lower is better)
Translates to: EAEGTRNRSHQGLWTVACPGWLR*CSGCTK
Trigger: CTTCGTGCACCCCGAGCACCACCTCAGCCATCCTGG...ACAAGCAACAGTCCACAGCCCTTGGTGGCTTCTGTTCCTTGTCCCCTCGGCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR CCA 90 bp AGGGGACAAGGAACAGAAGCCACCAAGGGCTGTGGACTGTTGCTTGTGGGCACATTCTGGGCTGTGTCCTaGCAGCGGCTCAGCCCACTG +
Preference number: 4 (lower is better)
Translates to: RGQGTEATKGCGLLLVGTFWAVS*QRLSPL
Trigger: CAGTGGGCTGAGCCGCTGCCAGGACACAGCCCAGAA...TGTGCCCACAAGCAACAGTCCACAGCCCTTGGTGGCTTCTGTTCCTTGTCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR CCA 90 bp ACTGTGCATGGGTTTTGGTGGCTGGGACAGCCACGTGGAGGATTCCCTCAGTGGTCAGCCAGCTGGGCCTaGCAGTCCAGTAGGTCATCC +
Preference number: 4 (lower is better)
Translates to: TVHGFWWLGQPRGGFPQWSASWA*QSSRSS
Trigger: GGATGACCTACTGGACTGCCAGGCCCAGCTGGCTGA...CCACTGAGGGAATCCTCCACGTGGCTGTCCCAGCCACCAAAACCCATGCACAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR CCA 90 bp GTGGAGGATTCCCTCAGTGGCCTCCTTAGTGCCATTTGGGCTAGCCAGGGAAGGCTAGGGGTTGGGTCCTaGCCAGCCTGTCTAGTTGGC +
Preference number: 4 (lower is better)
Translates to: VEDSLSGLLSAIWASQGRLGVGS*PACLVG
Trigger: GCCAACTAGACAGGCTGGCCAGGACCCAACCCCTAG...CCTTCCCTGGCTAGCCCAAATGGCACTAAGGAGGCCACTGAGGGAATCCTCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR CCA 90 bp ACTGAGGCTGGGAGCCTCAGCAGAGACCGGTGTCAAGAGTCTCTGGGAACTGCAGTGGGATCTAGGGGTTaGGTCCTGGCCAGCCTGTCT +
Preference number: 4 (lower is better)
Translates to: TEAGSLSRDRCQESLGTAVGSRG*VLASLS
Trigger: AGACAGGCTGGCCAGGACCCAACCCCTAGATCCCAC...TGCAGTTCCCAGAGACTCTTGACACCGGTCTCTGCTGAGGCTCCCAGCCTCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332312.4
3UTR CAA 72 bp AAGGAACAGAAGCCACCAAGGGCTGTGGACTGTTGCTaGTGGGCACAGGGCAATGCGGACAGGCCACTGGCT +
Preference number: 4 (lower is better)
Translates to: KEQKPPRAVDCC*WAQGNADRPLA
Trigger: AGCCAGTGGCCTGTCCGCATTGCCCTGTGCCCACAAGCAACAGTCCACAGCCCTTGGTGGCTTCTGTTCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR TCA 90 bp AGGGGACAAGGAACAGAAGCCACCAAGGGCTGTGGACTGTTGCTTGTGGGCACATGCCCTGAAGGAATCTaGGGCTCAGGCTCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: RGQGTEATKGCGLLLVGTCPEGI*GSGSSW
Trigger: CCAGCTGGAGCCTGAGCCTCAGATTCCTTCAGGGCA...TGTGCCCACAAGCAACAGTCCACAGCCCTTGGTGGCTTCTGTTCCTTGTCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR TCA 90 bp ACTGAGGCTGGGAGCCTCAGCAGAGACCGGTGTCAAGAGTCTCTGGGAACTGCAAGAGTGATCTCGCCTTaGAGTGAGCTGCCCGTCCCT +
Preference number: 4 (lower is better)
Translates to: TEAGSLSRDRCQESLGTARVISP*SELPVP
Trigger: AGGGACGGGCAGCTCACTTCAAGGCGAGATCACTCT...TGCAGTTCCCAGAGACTCTTGACACCGGTCTCTGCTGAGGCTCCCAGCCTCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR GCA 90 bp ACTGTGCATGGGTTTTGGTGGCTGGGACAGCCACGTGGAGGATTCCCTCAGTGGAGGTGGTGCTCGGGGTaGACGAAGTCTCCAGTGAGA +
Preference number: 4 (lower is better)
Translates to: TVHGFWWLGQPRGGFPQWRWCSG*TKSPVR
Trigger: TCTCACTGGAGACTTCGTGCACCCCGAGCACCACCT...CCACTGAGGGAATCCTCCACGTGGCTGTCCCAGCCACCAAAACCCATGCACAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR GCA 90 bp TACCAAATGTCCAGGAACCAAAGGCAGGGCTGTGGGGACCTGAAGAGCAGCACAAGGCGGGCAATGTCCTaGGTGTGCTGGGCCAGCGTA +
Preference number: 4 (lower is better)
Translates to: YQMSRNQRQGCGDLKSSTRRAMS*VCWASV
Trigger: TACGCTGGCCCAGCACACGCAGGACATTGCCCGCCT...TGTGCTGCTCTTCAGGTCCCCACAGCCCTGCCTTTGGTTCCTGGACATTTGGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR GCA 90 bp ACTGTGCATGGGTTTTGGTGGCTGGGACAGCCACGTGGAGGATTCCCTCAGTGGGGGCCTGTAGGTCTCTaGACAGTTGCTGAGGCTGGT +
Preference number: 4 (lower is better)
Translates to: TVHGFWWLGQPRGGFPQWGPVGL*TVAEAG
Trigger: ACCAGCCTCAGCAACTGTGCAGAGACCTACAGGCCC...CCACTGAGGGAATCCTCCACGTGGCTGTCCCAGCCACCAAAACCCATGCACAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR CCA 90 bp ACTGGCTGTGGGCCTGTAGGTCTCTGCACAGTTGCTGAGGCTGGTGCTGACTGCAGGTCACACTCACTCTaGACGCCTTGCAGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: TGCGPVGLCTVAEAGADCRSHSL*TPCSFC
Trigger: GCAGAAGCTGCAAGGCGTCCAGAGTGAGTGTGACCT...GCAGTCAGCACCAGCCTCAGCAACTGTGCAGAGACCTACAGGCCCACAGCCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR CCA 90 bp AAACCTAGTCCTGATGGCTGCGAAGAGAAGCCGAGGGGACAAGGAACAGAAGCCCGCGCTCTTCCAGCATaGTCCCAAAGCCGCCCACTC +
Preference number: 4 (lower is better)
Translates to: KPSPDGCEEKPRGQGTEARALPA*SQSRPL
Trigger: GAGTGGGCGGCTTTGGGACCATGCTGGAAGAGCGCG...GGCTTCTGTTCCTTGTCCCCTCGGCTTCTCTTCGCAGCCATCAGGACTAGGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR CCA 90 bp TGCGAAGAGAAGCCGAGGGGACAAGGAACAGAAGCCACCAAGGGCTGTGGACTGGGAGAGGCGCTGTCATaGCTTAGCTCCCCAGCCAAT +
Preference number: 4 (lower is better)
Translates to: CEEKPRGQGTEATKGCGLGEALS*LSSPAN
Trigger: ATTGGCTGGGGAGCTAAGCCATGACAGCGCCTCTCC...CAGTCCACAGCCCTTGGTGGCTTCTGTTCCTTGTCCCCTCGGCTTCTCTTCGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR CCA 90 bp GGCATCACCTTCCTGCACAAACCTAGTCCTGATGGCTGCGAAGAGAAGCCGAGGGTGCCATTGAGCTGCTaGAGCAGTGCTGCGTGGCTG +
Preference number: 4 (lower is better)
Translates to: GITFLHKPSPDGCEEKPRVPLSC*SSAAWL
Trigger: CAGCCACGCAGCACTGCTCCAGCAGCTCAATGGCAC...CCTCGGCTTCTCTTCGCAGCCATCAGGACTAGGTTTGTGCAGGAAGGTGATGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR CCA 90 bp TGCGAAGAGAAGCCGAGGGGACAAGGAACAGAAGCCACCAAGGGCTGTGGACTGTGCTCCTGGATGGCCTaGACTTCGGCTTCCACCTTG +
Preference number: 4 (lower is better)
Translates to: CEEKPRGQGTEATKGCGLCSWMA*TSASTL
Trigger: CAAGGTGGAAGCCGAAGTCCAGGCCATCCAGGAGCA...CAGTCCACAGCCCTTGGTGGCTTCTGTTCCTTGTCCCCTCGGCTTCTCTTCGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR CCA 90 bp GGCATCACCTTCCTGCACAAACCTAGTCCTGATGGCTGCGAAGAGAAGCCGAGGCTGCTGACCTGCTCCTaGATGGCCTGGACTTCGGCT +
Preference number: 4 (lower is better)
Translates to: GITFLHKPSPDGCEEKPRLLTCS*MAWTSA
Trigger: AGCCGAAGTCCAGGCCATCCAGGAGCAGGTCAGCAG...CCTCGGCTTCTCTTCGCAGCCATCAGGACTAGGTTTGTGCAGGAAGGTGATGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR CCA 90 bp ACTGGCTGTGGGCCTGTAGGTCTCTGCACAGTTGCTGAGGCTGGTGCTGACTGCACTTGTGCCACCCGCTaGTCAAAGTGTCCCACTGTG +
Preference number: 4 (lower is better)
Translates to: TGCGPVGLCTVAEAGADCTCATR*SKCPTV
Trigger: CACAGTGGGACACTTTGACCAGCGGGTGGCACAAGT...GCAGTCAGCACCAGCCTCAGCAACTGTGCAGAGACCTACAGGCCCACAGCCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR CCA 90 bp ACTGAGGCTGGGAGCCTCAGCAGAGACCGGTGTCAAGAGTCTCTGGGAACTGCATTCAGCTGGTCCACATaGCTCCACAGGCCCTCTCTG +
Preference number: 4 (lower is better)
Translates to: TEAGSLSRDRCQESLGTAFSWST*LHRPSL
Trigger: CAGAGAGGGCCTGTGGAGCCATGTGGACCAGCTGAA...TGCAGTTCCCAGAGACTCTTGACACCGGTCTCTGCTGAGGCTCCCAGCCTCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR CCA 90 bp AAACCTAGTCCTGATGGCTGCGAAGAGAAGCCGAGGGGACAAGGAACAGAAGCCCTAGTTGGCTTGCCCTaGCCGCACCTGCTCAGCCAG +
Preference number: 4 (lower is better)
Translates to: KPSPDGCEEKPRGQGTEALVGLP*PHLLSQ
Trigger: CTGGCTGAGCAGGTGCGGCCAGGGCAAGCCAACTAG...GGCTTCTGTTCCTTGTCCCCTCGGCTTCTCTTCGCAGCCATCAGGACTAGGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR CCA 90 bp GACAAGGAACAGAAGCCACCAAGGGCTGTGGACTGTTGCTTGTGGGCACAGGGCTGTTCCCCGAGTTGGTaGGATCTAGGGGTTGGGTCC +
Preference number: 4 (lower is better)
Translates to: DKEQKPPRAVDCCLWAQGCSPSW*DLGVGS
Trigger: GGACCCAACCCCTAGATCCCACCAACTCGGGGAACA...GCCCTGTGCCCACAAGCAACAGTCCACAGCCCTTGGTGGCTTCTGTTCCTTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR CCA 90 bp ACTGGCTGTGGGCCTGTAGGTCTCTGCACAGTTGCTGAGGCTGGTGCTGACTGCGATAAGGCTGGGCTCTaGGGTGATGTTCCCCGAGTT +
Preference number: 4 (lower is better)
Translates to: TGCGPVGLCTVAEAGADCDKAGL*GDVPRV
Trigger: AACTCGGGGAACATCACCCCAGAGCCCAGCCTTATC...GCAGTCAGCACCAGCCTCAGCAACTGTGCAGAGACCTACAGGCCCACAGCCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR CCA 90 bp GACAAGGAACAGAAGCCACCAAGGGCTGTGGACTGTTGCTTGTGGGCACAGGGCAGCCACCAAGGGCTGTaGACTGTTGCTTGTGGGCAC +
Preference number: 4 (lower is better)
Translates to: DKEQKPPRAVDCCLWAQGSHQGL*TVACGH
Trigger: GTGCCCACAAGCAACAGTCCACAGCCCTTGGTGGCT...GCCCTGTGCCCACAAGCAACAGTCCACAGCCCTTGGTGGCTTCTGTTCCTTGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR CCA 90 bp AGGGGACAAGGAACAGAAGCCACCAAGGGCTGTGGACTGTTGCTTGTGGGCACACCAAAGGCAGGGCTGTaGGGACCTGAAGAGCAGCAC +
Preference number: 4 (lower is better)
Translates to: RGQGTEATKGCGLLLVGTPKAGL*GPEEQH
Trigger: GTGCTGCTCTTCAGGTCCCCACAGCCCTGCCTTTGG...TGTGCCCACAAGCAACAGTCCACAGCCCTTGGTGGCTTCTGTTCCTTGTCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR TCA 90 bp ACTGTGCATGGGTTTTGGTGGCTGGGACAGCCACGTGGAGGATTCCCTCAGTGGGTCCTGAAGGACACGTaGGGAGCCAGAAACATCTGG +
Preference number: 4 (lower is better)
Translates to: TVHGFWWLGQPRGGFPQWVLKDT*GARNIW
Trigger: CCAGATGTTTCTGGCTCCTCACGTGTCCTTCAGGAC...CCACTGAGGGAATCCTCCACGTGGCTGTCCCAGCCACCAAAACCCATGCACAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR GCA 90 bp ACTGAGGCTGGGAGCCTCAGCAGAGACCGGTGTCAAGAGTCTCTGGGAACTGCAGGCCCCCATCTACACTaGCGGTATTCAGCCTTTACG +
Preference number: 4 (lower is better)
Translates to: TEAGSLSRDRCQESLGTAGPHLH*RYSAFT
Trigger: CGTAAAGGCTGAATACCGGCAGTGTAGATGGGGGCC...TGCAGTTCCCAGAGACTCTTGACACCGGTCTCTGCTGAGGCTCCCAGCCTCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR GCA 90 bp TCTACCCTGGCCTTCAAGCATGACATCCTTGCCTTGACCGCTGTCCGGAACTGTCCATGGTCCGTGAGGTaGTCAGGGCAGCGTTTCCCA +
Preference number: 4 (lower is better)
Translates to: STLAFKHDILALTAVRNCPWSVR*SGQRFP
Trigger: TGGGAAACGCTGCCCTGAGCACCTCACGGACCATGG...ACAGTTCCGGACAGCGGTCAAGGCAAGGATGTCATGCTTGAAGGCCAGGGTAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR GCA 90 bp GTGGAGGATTCCCTCAGTGGCCTCCTTAGTGCCATTTGGGCTAGCCAGGGAAGGCCAAGTGCCAGCCCATaGACCTTGTCTAGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: VEDSLSGLLSAIWASQGRPSASP*TLSRSC
Trigger: GCAGCTTCTAGACAAGGTGCATGGGCTGGCACTTGG...CCTTCCCTGGCTAGCCCAAATGGCACTAAGGAGGCCACTGAGGGAATCCTCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR GCA 90 bp GCTGGCTGTCCAGACACTGATTTGCTGACAGTGGAATGTGAACTCTCTCAAGTCGCCTCGCTCCGGCTCTaGCAGGCCTTCACCTCTGCC +
Preference number: 4 (lower is better)
Translates to: AGCPDTDLLTVECELSQVASLRL*QAFTSA
Trigger: GGCAGAGGTGAAGGCCTGGCAGAGCCGGAGCGAGGC...GACTTGAGAGAGTTCACATTCCACTGTCAGCAAATCAGTGTCTGGACAGCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR GCA 90 bp CATCCTTGCCTTGACCGCTGTCCGGAACTGTCCAGTTTCTGCAGCACTGTGCATCGCACCCTCCACTTGTaGCACCCGCTGGTCAAAGTG +
Preference number: 4 (lower is better)
Translates to: HPCLDRCPELSSFCSTVHRTLHL*HPLVKV
Trigger: CACTTTGACCAGCGGGTGGCACAAGTGGAGGGTGCG...ATGCACAGTGCTGCAGAAACTGGACAGTTCCGGACAGCGGTCAAGGCAAGGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR GCA 90 bp CTTAGTTCAGATACAACATCCATGAAGCTGCCAGGTGTGAGGAGAGTTCCAGTGTGCCCTGGCCGCACCTaGTCAGCCAGCTGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: LSSDTTSMKLPGVRRVPVCPGRT*SASWAW
Trigger: CCAGGCCCAGCTGGCTGAGCAGGTGCGGCCAGGGCA...CACTGGAACTCTCCTCACACCTGGCAGCTTCATGGATGTTGTATCTGAACTAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR CCA 90 bp CTTAGTTCAGATACAACATCCATGAAGCTGCCAGGTGTGAGGAGAGTTCCAGTGGGTGCAGCCTCCGGCTaGCGGCCTGACCCTCCTCAC +
Preference number: 4 (lower is better)
Translates to: LSSDTTSMKLPGVRRVPVGAASG*RPDPPH
Trigger: GTGAGGAGGGTCAGGCCGCCAGCCGGAGGCTGCACC...CACTGGAACTCTCCTCACACCTGGCAGCTTCATGGATGTTGTATCTGAACTAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR CCA 90 bp AACTCTCTCAAGTCTACCCTGGCCTTCAAGCATGACATCCTTGCCTTGACCGCTTGGAGCAGTGCTGCGTaGCTGGCCACCTGGCGTAGG +
Preference number: 4 (lower is better)
Translates to: NSLKSTLAFKHDILALTAWSSAA*LATWRR
Trigger: CCTACGCCAGGTGGCCAGCCACGCAGCACTGCTCCA...AGCGGTCAAGGCAAGGATGTCATGCTTGAAGGCCAGGGTAGACTTGAGAGAGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR CCA 90 bp ACTGTGCATGGGTTTTGGTGGCTGGGACAGCCACGTGGAGGATTCCCTCAGTGGACTGTGCATGGGTTTTaGTGGCTGGGACAGCCACGT +
Preference number: 4 (lower is better)
Translates to: TVHGFWWLGQPRGGFPQWTVHGF*WLGQPR
Trigger: ACGTGGCTGTCCCAGCCACCAAAACCCATGCACAGT...CCACTGAGGGAATCCTCCACGTGGCTGTCCCAGCCACCAAAACCCATGCACAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR CCA 90 bp AAACCTAGTCCTGATGGCTGCGAAGAGAAGCCGAGGGGACAAGGAACAGAAGCCCTTTCCTCCAGCTGGTaGCTCCTTCTCAGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: KPSPDGCEEKPRGQGTEALSSSW*LLLRAW
Trigger: CCAGGCCCTGAGAAGGAGCCACCAGCTGGAGGAAAG...GGCTTCTGTTCCTTGTCCCCTCGGCTTCTCTTCGCAGCCATCAGGACTAGGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR TCA 90 bp GACAAGGAACAGAAGCCACCAAGGGCTGTGGACTGTTGCTTGTGGGCACAGGGCAGGGTACCATATGTTTaGGCCAGGCGCTGGACATCA +
Preference number: 4 (lower is better)
Translates to: DKEQKPPRAVDCCLWAQGRVPYV*ARRWTS
Trigger: TGATGTCCAGCGCCTGGCTCAAACATATGGTACCCT...GCCCTGTGCCCACAAGCAACAGTCCACAGCCCTTGGTGGCTTCTGTTCCTTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR TCA 90 bp TGCGAAGAGAAGCCGAGGGGACAAGGAACAGAAGCCACCAAGGGCTGTGGACTGCATCCATACGGGCATTaGTCAAGGCTAGTTGCCCAC +
Preference number: 4 (lower is better)
Translates to: CEEKPRGQGTEATKGCGLHPYGH*SRLVAH
Trigger: GTGGGCAACTAGCCTTGATCAATGCCCGTATGGATG...CAGTCCACAGCCCTTGGTGGCTTCTGTTCCTTGTCCCCTCGGCTTCTCTTCGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR TCA 90 bp GAAGCCGAGGGGACAAGGAACAGAAGCCACCAAGGGCTGTGGACTGTTGCTTGTATGACATCCTTGCCTTaGCCGCTGTCCGGAACTGTC +
Preference number: 4 (lower is better)
Translates to: EAEGTRNRSHQGLWTVACMTSLP*PLSGTV
Trigger: GACAGTTCCGGACAGCGGTCAAGGCAAGGATGTCAT...ACAAGCAACAGTCCACAGCCCTTGGTGGCTTCTGTTCCTTGTCCCCTCGGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR TCA 90 bp CATCCTTGCCTTGACCGCTGTCCGGAACTGTCCAGTTTCTGCAGCACTGTGCATCCTGGCCTTCAAGCATaGCATCCTTGCCTTGACCGC +
Preference number: 4 (lower is better)
Translates to: HPCLDRCPELSSFCSTVHPGLQA*HPCLDR
Trigger: GCGGTCAAGGCAAGGATGTCATGCTTGAAGGCCAGG...ATGCACAGTGCTGCAGAAACTGGACAGTTCCGGACAGCGGTCAAGGCAAGGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR TCA 90 bp GGCATCACCTTCCTGCACAAACCTAGTCCTGATGGCTGCGAAGAGAAGCCGAGGGCTTCTGTTCTGTCCTaGAGGACACGTGAGGAGCCA +
Preference number: 4 (lower is better)
Translates to: GITFLHKPSPDGCEEKPRASVLS*RTREEP
Trigger: TGGCTCCTCACGTGTCCTTCAGGACAGAACAGAAGC...CCTCGGCTTCTCTTCGCAGCCATCAGGACTAGGTTTGTGCAGGAAGGTGATGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR GCA 90 bp ACTGAGGCTGGGAGCCTCAGCAGAGACCGGTGTCAAGAGTCTCTGGGAACTGCATCACTCTGGACGCCTTaGAGCTTCTGCTCAAAGCCA +
Preference number: 4 (lower is better)
Translates to: TEAGSLSRDRCQESLGTASLWTP*SFCSKP
Trigger: TGGCTTTGAGCAGAAGCTGCAAGGCGTCCAGAGTGA...TGCAGTTCCCAGAGACTCTTGACACCGGTCTCTGCTGAGGCTCCCAGCCTCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR GCA 90 bp AGGGGACAAGGAACAGAAGCCACCAAGGGCTGTGGACTGTTGCTTGTGGGCACACAGACAGCATCCCCTTaGTCCACCCTCTGTCCCATT +
Preference number: 4 (lower is better)
Translates to: RGQGTEATKGCGLLLVGTQTASP*STLCPI
Trigger: AATGGGACAGAGGGTGGAGCAAGGGGATGCTGTCTG...TGTGCCCACAAGCAACAGTCCACAGCCCTTGGTGGCTTCTGTTCCTTGTCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR GCA 90 bp GTGGAGGATTCCCTCAGTGGCCTCCTTAGTGCCATTTGGGCTAGCCAGGGAAGGAGTGAGACCAACCGTTaGTCTAGCACAGCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: VEDSLSGLLSAIWASQGRSETNR*SSTASS
Trigger: AGAGCTGGCTGTGCTAGAGCAACGGTTGGTCTCACT...CCTTCCCTGGCTAGCCCAAATGGCACTAAGGAGGCCACTGAGGGAATCCTCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR GCA 90 bp TACCAAATGTCCAGGAACCAAAGGCAGGGCTGTGGGGACCTGAAGAGCAGCACAACAGTGCCATTGAGCTaGTGGAGCAGTGCTGCGTGG +
Preference number: 4 (lower is better)
Translates to: YQMSRNQRQGCGDLKSSTTVPLS*WSSAAW
Trigger: CCACGCAGCACTGCTCCAGCAGCTCAATGGCACTGT...TGTGCTGCTCTTCAGGTCCCCACAGCCCTGCCTTTGGTTCCTGGACATTTGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR GCA 90 bp AAACCTAGTCCTGATGGCTGCGAAGAGAAGCCGAGGGGACAAGGAACAGAAGCCGCAATGTCCTGCGTGTaGTGGGCCAGCGTACGATTC +
Preference number: 4 (lower is better)
Translates to: KPSPDGCEEKPRGQGTEAAMSCV*WASVRF
Trigger: GAATCGTACGCTGGCCCAGCACACGCAGGACATTGC...GGCTTCTGTTCCTTGTCCCCTCGGCTTCTCTTCGCAGCCATCAGGACTAGGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR GCA 90 bp ACTGAGGCTGGGAGCCTCAGCAGAGACCGGTGTCAAGAGTCTCTGGGAACTGCAGTTTCTGCAGCACTGTaGATGGGTTTTGGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: TEAGSLSRDRCQESLGTAVSAAL*MGFGGW
Trigger: CCAGCCACCAAAACCCATGCACAGTGCTGCAGAAAC...TGCAGTTCCCAGAGACTCTTGACACCGGTCTCTGCTGAGGCTCCCAGCCTCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR CCA 90 bp GCTGGCTGTCCAGACACTGATTTGCTGACAGTGGAATGTGAACTCTCTCAAGTCCTGTCCCGGGGCACTTaGGCCCCCATCTACACTGCC +
Preference number: 4 (lower is better)
Translates to: AGCPDTDLLTVECELSQVLSRGT*APIYTA
Trigger: GGCAGTGTAGATGGGGGCCCAAGTGCCCCGGGACAG...GACTTGAGAGAGTTCACATTCCACTGTCAGCAAATCAGTGTCTGGACAGCCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR CCA 90 bp GGCATCACCTTCCTGCACAAACCTAGTCCTGATGGCTGCGAAGAGAAGCCGAGGCATCCAGGGACGTGTTaGCAGCCAAGAAGGCATCAG +
Preference number: 4 (lower is better)
Translates to: GITFLHKPSPDGCEEKPRHPGTC*QPRRHQ
Trigger: CTGATGCCTTCTTGGCTGCCAACACGTCCCTGGATG...CCTCGGCTTCTCTTCGCAGCCATCAGGACTAGGTTTGTGCAGGAAGGTGATGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR CCA 90 bp GAAGCCGAGGGGACAAGGAACAGAAGCCACCAAGGGCTGTGGACTGTTGCTTGTATGGGTTTTGGTGGCTaGGACAGCCACGTGGAGGAT +
Preference number: 4 (lower is better)
Translates to: EAEGTRNRSHQGLWTVACMGFGG*DSHVED
Trigger: ATCCTCCACGTGGCTGTCCCAGCCACCAAAACCCAT...ACAAGCAACAGTCCACAGCCCTTGGTGGCTTCTGTTCCTTGTCCCCTCGGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR TCA 90 bp GCTGGCTGTCCAGACACTGATTTGCTGACAGTGGAATGTGAACTCTCTCAAGTCGTACTGTGCGGTACGTaGCTGTCCCGGGGCACTTGG +
Preference number: 4 (lower is better)
Translates to: AGCPDTDLLTVECELSQVVLCGT*LSRGTW
Trigger: CCAAGTGCCCCGGGACAGTCACGTACCGCACAGTAC...GACTTGAGAGAGTTCACATTCCACTGTCAGCAAATCAGTGTCTGGACAGCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR TCA 90 bp TACTCTGATAGTACCAGAGTGGAGGGCAGAATACCAAATGTCCAGGAACCAAAGAGGCTCCAGCTGGGGTaGGGCAGCCCCATGGTCCGT +
Preference number: 4 (lower is better)
Translates to: YSDSTRVEGRIPNVQEPKRLQLG*GSPMVR
Trigger: ACGGACCATGGGGCTGCCTCACCCCAGCTGGAGCCT...CTTTGGTTCCTGGACATTTGGTATTCTGCCCTCCACTCTGGTACTATCAGAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR TCA 90 bp GCTGGCTGTCCAGACACTGATTTGCTGACAGTGGAATGTGAACTCTCTCAAGTCCAAGCCCCTCAGGGATaGCCCCAAAGCCCACAGGGA +
Preference number: 4 (lower is better)
Translates to: AGCPDTDLLTVECELSQVQAPQG*PQSPQG
Trigger: TCCCTGTGGGCTTTGGGGTCATCCCTGAGGGGCTTG...GACTTGAGAGAGTTCACATTCCACTGTCAGCAAATCAGTGTCTGGACAGCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR TCA 90 bp GCTGGCTGTCCAGACACTGATTTGCTGACAGTGGAATGTGAACTCTCTCAAGTCTGGAGCCTTGGCTGCTaGCCTGCTCCTGGATGGCCT +
Preference number: 4 (lower is better)
Translates to: AGCPDTDLLTVECELSQVWSLGC*PAPGWP
Trigger: AGGCCATCCAGGAGCAGGTCAGCAGCCAAGGCTCCA...GACTTGAGAGAGTTCACATTCCACTGTCAGCAAATCAGTGTCTGGACAGCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR GCA 90 bp CATCCTTGCCTTGACCGCTGTCCGGAACTGTCCAGTTTCTGCAGCACTGTGCATAGGGCTGTGGACTGTTaGTTGTGGGCACAGGGCAAT +
Preference number: 4 (lower is better)
Translates to: HPCLDRCPELSSFCSTVHRAVDC*LWAQGN
Trigger: ATTGCCCTGTGCCCACAAGCAACAGTCCACAGCCCT...ATGCACAGTGCTGCAGAAACTGGACAGTTCCGGACAGCGGTCAAGGCAAGGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR CCA 90 bp CTTAGTTCAGATACAACATCCATGAAGCTGCCAGGTGTGAGGAGAGTTCCAGTGGGTGAGGCAGCCCCATaGTCCGTGAGGTGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: LSSDTTSMKLPGVRRVPVGEAAP*SVRCSG
Trigger: CCCTGAGCACCTCACGGACCATGGGGCTGCCTCACC...CACTGGAACTCTCCTCACACCTGGCAGCTTCATGGATGTTGTATCTGAACTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR CCA 90 bp GACAAGGAACAGAAGCCACCAAGGGCTGTGGACTGTTGCTTGTGGGCACAGGGCCTCTCAAGTCTACCCTaGCCTTCAAGCATGACATCC +
Preference number: 4 (lower is better)
Translates to: DKEQKPPRAVDCCLWAQGLSSLP*PSSMTS
Trigger: GGATGTCATGCTTGAAGGCCAGGGTAGACTTGAGAG...GCCCTGTGCCCACAAGCAACAGTCCACAGCCCTTGGTGGCTTCTGTTCCTTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR CCA 90 bp AGGGGACAAGGAACAGAAGCCACCAAGGGCTGTGGACTGTTGCTTGTGGGCACAGGTGTCAAGAGTCTCTaGGAACTGCATAGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: RGQGTEATKGCGLLLVGTGVKSL*ELHRPE
Trigger: CTCAGGCCTATGCAGTTCCCAGAGACTCTTGACACC...TGTGCCCACAAGCAACAGTCCACAGCCCTTGGTGGCTTCTGTTCCTTGTCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR TCA 90 bp AGGGGACAAGGAACAGAAGCCACCAAGGGCTGTGGACTGTTGCTTGTGGGCACATGGCTGTCCAGACACTaGTTTGCTGACAGTGGAATG +
Preference number: 4 (lower is better)
Translates to: RGQGTEATKGCGLLLVGTWLSRH*FADSGM
Trigger: CATTCCACTGTCAGCAAATCAGTGTCTGGACAGCCA...TGTGCCCACAAGCAACAGTCCACAGCCCTTGGTGGCTTCTGTTCCTTGTCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR TCA 90 bp GGCATCACCTTCCTGCACAAACCTAGTCCTGATGGCTGCGAAGAGAAGCCGAGGTGTAGAGAAATGCCCTaGCCTCGCAGGAAGGATTTC +
Preference number: 4 (lower is better)
Translates to: GITFLHKPSPDGCEEKPRCREMP*PRRKDF
Trigger: GAAATCCTTCCTGCGAGGTCAGGGCATTTCTCTACA...CCTCGGCTTCTCTTCGCAGCCATCAGGACTAGGTTTGTGCAGGAAGGTGATGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR GCA 90 bp TACCAAATGTCCAGGAACCAAAGGCAGGGCTGTGGGGACCTGAAGAGCAGCACACTCCCTCCTGTAGGATaGAGGTCACATTCCTGTGCA +
Preference number: 4 (lower is better)
Translates to: YQMSRNQRQGCGDLKSSTLPPVG*RSHSCA
Trigger: TGCACAGGAATGTGACCTGCATCCTACAGGAGGGAG...TGTGCTGCTCTTCAGGTCCCCACAGCCCTGCCTTTGGTTCCTGGACATTTGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR GCA 90 bp GAAGCCGAGGGGACAAGGAACAGAAGCCACCAAGGGCTGTGGACTGTTGCTTGTTGGTCTGAAGAGTGTTaGTCACCTCTGTCACCTTGC +
Preference number: 4 (lower is better)
Translates to: EAEGTRNRSHQGLWTVACWSEEC*SPLSPC
Trigger: GCAAGGTGACAGAGGTGAGCAACACTCTTCAGACCA...ACAAGCAACAGTCCACAGCCCTTGGTGGCTTCTGTTCCTTGTCCCCTCGGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR GCA 90 bp TACTCTGATAGTACCAGAGTGGAGGGCAGAATACCAAATGTCCAGGAACCAAAGCTCCCCCAGAGTCGGTaGAGCCGTCGGTCCACGTAC +
Preference number: 4 (lower is better)
Translates to: YSDSTRVEGRIPNVQEPKLPQSR*SRRSTY
Trigger: GTACGTGGACCGACGGCTGCACCGACTCTGGGGGAG...CTTTGGTTCCTGGACATTTGGTATTCTGCCCTCCACTCTGGTACTATCAGAGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR GCA 90 bp GCTGGCTGTCCAGACACTGATTTGCTGACAGTGGAATGTGAACTCTCTCAAGTCGGATGGCTGAGGTGGTaGTCGGGGTGCACGAAGTCT +
Preference number: 4 (lower is better)
Translates to: AGCPDTDLLTVECELSQVGWLRW*SGCTKS
Trigger: AGACTTCGTGCACCCCGAGCACCACCTCAGCCATCC...GACTTGAGAGAGTTCACATTCCACTGTCAGCAAATCAGTGTCTGGACAGCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR GCA 90 bp TACTCTGATAGTACCAGAGTGGAGGGCAGAATACCAAATGTCCAGGAACCAAAGGAGCTGCTGGAGCAGTaGTGCGTGGCTGGCCACCTG +
Preference number: 4 (lower is better)
Translates to: YSDSTRVEGRIPNVQEPKELLEQ*CVAGHL
Trigger: CAGGTGGCCAGCCACGCAGCACTGCTCCAGCAGCTC...CTTTGGTTCCTGGACATTTGGTATTCTGCCCTCCACTCTGGTACTATCAGAGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR CCA 90 bp GACAAGGAACAGAAGCCACCAAGGGCTGTGGACTGTTGCTTGTGGGCACAGGGCCTAGAAGCTGCACCTTaGTCTGAAGAGTGTTGCTCA +
Preference number: 4 (lower is better)
Translates to: DKEQKPPRAVDCCLWAQGLEAAP*SEECCS
Trigger: TGAGCAACACTCTTCAGACCAAGGTGCAGCTTCTAG...GCCCTGTGCCCACAAGCAACAGTCCACAGCCCTTGGTGGCTTCTGTTCCTTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR CCA 90 bp GAAGCCGAGGGGACAAGGAACAGAAGCCACCAAGGGCTGTGGACTGTTGCTTGTAAGGCATCAGAGTACTaGCTGACAGAGTCACTGAGG +
Preference number: 4 (lower is better)
Translates to: EAEGTRNRSHQGLWTVACKASEY*LTESLR
Trigger: CCTCAGTGACTCTGTCAGCCAGTACTCTGATGCCTT...ACAAGCAACAGTCCACAGCCCTTGGTGGCTTCTGTTCCTTGTCCCCTCGGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR CCA 90 bp ACTGGCTGTGGGCCTGTAGGTCTCTGCACAGTTGCTGAGGCTGGTGCTGACTGCTCTAAACAGATTGCCTaGATTCCGTTCTTTCCTGGG +
Preference number: 4 (lower is better)
Translates to: TGCGPVGLCTVAEAGADCSKQIA*IPFFPG
Trigger: CCCAGGAAAGAACGGAATCCAGGCAATCTGTTTAGA...GCAGTCAGCACCAGCCTCAGCAACTGTGCAGAGACCTACAGGCCCACAGCCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
3UTR CAA 72 bp AAGTCTACCCTGGCCTTCAAGCATGACATCCTTGCCTaGACCGCTGTCCGGAACTGTCCAGTTTCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: KSTLAFKHDILA*TAVRNCPVSAA
Trigger: TGCTGCAGAAACTGGACAGTTCCGGACAGCGGTCAAGGCAAGGATGTCATGCTTGAAGGCCAGGGTAGACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR GCA 90 bp CTTAGTTCAGATACAACATCCATGAAGCTGCCAGGTGTGAGGAGAGTTCCAGTGGGCCTCATGGCCAAGTaGCAGCCCATGCACCTTGTC +
Preference number: 4 (lower is better)
Translates to: LSSDTTSMKLPGVRRVPVGLMAK*QPMHLV
Trigger: GACAAGGTGCATGGGCTGGCACTTGGCCATGAGGCC...CACTGGAACTCTCCTCACACCTGGCAGCTTCATGGATGTTGTATCTGAACTAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR GCA 90 bp CATCCTTGCCTTGACCGCTGTCCGGAACTGTCCAGTTTCTGCAGCACTGTGCATCACTTTGTAGAGAAATaGCCTGACCTCGCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: HPCLDRCPELSSFCSTVHHFVEK*PDLAGR
Trigger: CCTTCCTGCGAGGTCAGGGCATTTCTCTACAAAGTG...ATGCACAGTGCTGCAGAAACTGGACAGTTCCGGACAGCGGTCAAGGCAAGGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR CCA 90 bp AACTCTCTCAAGTCTACCCTGGCCTTCAAGCATGACATCCTTGCCTTGACCGCTAGCGTACGATTCAGCTaGTCCACATGGCTCCACAGG +
Preference number: 4 (lower is better)
Translates to: NSLKSTLAFKHDILALTASVRFS*STWLHR
Trigger: CCTGTGGAGCCATGTGGACCAGCTGAATCGTACGCT...AGCGGTCAAGGCAAGGATGTCATGCTTGAAGGCCAGGGTAGACTTGAGAGAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR CCA 90 bp GCTGGCTGTCCAGACACTGATTTGCTGACAGTGGAATGTGAACTCTCTCAAGTCATGTCCTGCGTGTGCTaGGCCAGCGTACGATTCAGC +
Preference number: 4 (lower is better)
Translates to: AGCPDTDLLTVECELSQVMSCVC*ASVRFS
Trigger: GCTGAATCGTACGCTGGCCCAGCACACGCAGGACAT...GACTTGAGAGAGTTCACATTCCACTGTCAGCAAATCAGTGTCTGGACAGCCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR CCA 90 bp GACAAGGAACAGAAGCCACCAAGGGCTGTGGACTGTTGCTTGTGGGCACAGGGCACATCTGGCAGCCTCTaGTCCTTAGTTCAGATACAA +
Preference number: 4 (lower is better)
Translates to: DKEQKPPRAVDCCLWAQGTSGSL*SLVQIQ
Trigger: TTGTATCTGAACTAAGGACCAGAGGCTGCCAGATGT...GCCCTGTGCCCACAAGCAACAGTCCACAGCCCTTGGTGGCTTCTGTTCCTTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR CCA 90 bp CATCCTTGCCTTGACCGCTGTCCGGAACTGTCCAGTTTCTGCAGCACTGTGCATGTTAAAAGCAAGGCTTaGAGCCCCTTTCCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: HPCLDRCPELSSFCSTVHVKSKA*SPFPPA
Trigger: AGCTGGAGGAAAGGGGCTCCAAGCCTTGCTTTTAAC...ATGCACAGTGCTGCAGAAACTGGACAGTTCCGGACAGCGGTCAAGGCAAGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR TCA 90 bp TCTACCCTGGCCTTCAAGCATGACATCCTTGCCTTGACCGCTGTCCGGAACTGTATTTCTCACCTTTTGTaGACATCTTGGGAGGGTGGG +
Preference number: 4 (lower is better)
Translates to: STLAFKHDILALTAVRNCISHLL*TSWEGG
Trigger: CCCACCCTCCCAAGATGTTCACAAAAGGTGAGAAAT...ACAGTTCCGGACAGCGGTCAAGGCAAGGATGTCATGCTTGAAGGCCAGGGTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR GCA 90 bp TACTCTGATAGTACCAGAGTGGAGGGCAGAATACCAAATGTCCAGGAACCAAAGCGCCTTGAAGTGAGCTaGCCGTCCCTTCTGCCAGCT +
Preference number: 4 (lower is better)
Translates to: YSDSTRVEGRIPNVQEPKRLEVS*PSLLPA
Trigger: AGCTGGCAGAAGGGACGGGCAGCTCACTTCAAGGCG...CTTTGGTTCCTGGACATTTGGTATTCTGCCCTCCACTCTGGTACTATCAGAGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR GCA 90 bp TACTCTGATAGTACCAGAGTGGAGGGCAGAATACCAAATGTCCAGGAACCAAAGCTTCGGCTTCCACCTTaGGTTCCCGCTCATCCAGGG +
Preference number: 4 (lower is better)
Translates to: YSDSTRVEGRIPNVQEPKLRLPP*VPAHPG
Trigger: CCCTGGATGAGCGGGAACGCAAGGTGGAAGCCGAAG...CTTTGGTTCCTGGACATTTGGTATTCTGCCCTCCACTCTGGTACTATCAGAGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR GCA 90 bp TCTACCCTGGCCTTCAAGCATGACATCCTTGCCTTGACCGCTGTCCGGAACTGTGAACTGTCCAGTTTCTaGAGCACTGTGCATGGGTTT +
Preference number: 4 (lower is better)
Translates to: STLAFKHDILALTAVRNCELSSF*STVHGF
Trigger: AAACCCATGCACAGTGCTGCAGAAACTGGACAGTTC...ACAGTTCCGGACAGCGGTCAAGGCAAGGATGTCATGCTTGAAGGCCAGGGTAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR GCA 90 bp CTTAGTTCAGATACAACATCCATGAAGCTGCCAGGTGTGAGGAGAGTTCCAGTGCTGGGGTTCTACAGCTaGCTAAGCCCTCACCTTGGG +
Preference number: 4 (lower is better)
Translates to: LSSDTTSMKLPGVRRVPVLGFYS*LSPHLG
Trigger: CCCAAGGTGAGGGCTTAGGCAGCTGTAGAACCCCAG...CACTGGAACTCTCCTCACACCTGGCAGCTTCATGGATGTTGTATCTGAACTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR CCA 90 bp CTTAGTTCAGATACAACATCCATGAAGCTGCCAGGTGTGAGGAGAGTTCCAGTGCTAGCCAGGGAAGGCTaGAAGGCGCTGCTGGATAAG +
Preference number: 4 (lower is better)
Translates to: LSSDTTSMKLPGVRRVPVLAREG*KALLDK
Trigger: CTTATCCAGCAGCGCCTTCCAGCCTTCCCTGGCTAG...CACTGGAACTCTCCTCACACCTGGCAGCTTCATGGATGTTGTATCTGAACTAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR CCA 90 bp GCTGGCTGTCCAGACACTGATTTGCTGACAGTGGAATGTGAACTCTCTCAAGTCCTCCTTAGTGCCATTTaGGCTAGCCAGGGAAGGCTG +
Preference number: 4 (lower is better)
Translates to: AGCPDTDLLTVECELSQVLLSAI*ASQGRL
Trigger: CAGCCTTCCCTGGCTAGCCCAAATGGCACTAAGGAG...GACTTGAGAGAGTTCACATTCCACTGTCAGCAAATCAGTGTCTGGACAGCCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR CCA 90 bp AACTCTCTCAAGTCTACCCTGGCCTTCAAGCATGACATCCTTGCCTTGACCGCTGGAGCCAGAAACATCTaGCAGCCTCTGGTCCTTAGT +
Preference number: 4 (lower is better)
Translates to: NSLKSTLAFKHDILALTAGARNI*QPLVLS
Trigger: ACTAAGGACCAGAGGCTGCCAGATGTTTCTGGCTCC...AGCGGTCAAGGCAAGGATGTCATGCTTGAAGGCCAGGGTAGACTTGAGAGAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR GCA 90 bp AACTCTCTCAAGTCTACCCTGGCCTTCAAGCATGACATCCTTGCCTTGACCGCTTGGGCATCACCTTCCTaGACAAACCTAGTCCTGATG +
Preference number: 4 (lower is better)
Translates to: NSLKSTLAFKHDILALTAWASPS*TNLVLM
Trigger: CATCAGGACTAGGTTTGTGCAGGAAGGTGATGCCCA...AGCGGTCAAGGCAAGGATGTCATGCTTGAAGGCCAGGGTAGACTTGAGAGAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR CCA 90 bp CTTAGTTCAGATACAACATCCATGAAGCTGCCAGGTGTGAGGAGAGTTCCAGTGCTGCAGCACTGTGCATaGGTTTTGGTGGCTGGGACA +
Preference number: 4 (lower is better)
Translates to: LSSDTTSMKLPGVRRVPVLQHCA*VLVAGT
Trigger: TGTCCCAGCCACCAAAACCCATGCACAGTGCTGCAG...CACTGGAACTCTCCTCACACCTGGCAGCTTCATGGATGTTGTATCTGAACTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR CCA 90 bp ACTGGCTGTGGGCCTGTAGGTCTCTGCACAGTTGCTGAGGCTGGTGCTGACTGCAATAAAGAGAACTCTTaGCTGAGTCTTTGTGCTTCT +
Preference number: 4 (lower is better)
Translates to: TGCGPVGLCTVAEAGADCNKENS*LSLCAS
Trigger: AGAAGCACAAAGACTCAGCCAAGAGTTCTCTTTATT...GCAGTCAGCACCAGCCTCAGCAACTGTGCAGAGACCTACAGGCCCACAGCCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR GCA 90 bp AACTCTCTCAAGTCTACCCTGGCCTTCAAGCATGACATCCTTGCCTTGACCGCTTCACCTCTGTCACCTTaGTTAGGATCTCGTCTAAGG +
Preference number: 4 (lower is better)
Translates to: NSLKSTLAFKHDILALTASPLSP*LGSRLR
Trigger: CCTTAGACGAGATCCTAAGCAAGGTGACAGAGGTGA...AGCGGTCAAGGCAAGGATGTCATGCTTGAAGGCCAGGGTAGACTTGAGAGAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR GCA 90 bp TACTCTGATAGTACCAGAGTGGAGGGCAGAATACCAAATGTCCAGGAACCAAAGACGCCTTGCAGCTTCTaGTCAAAGCCATCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: YSDSTRVEGRIPNVQEPKTPCSF*SKPSSR
Trigger: CCTGCTGGATGGCTTTGAGCAGAAGCTGCAAGGCGT...CTTTGGTTCCTGGACATTTGGTATTCTGCCCTCCACTCTGGTACTATCAGAGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR TCA 90 bp TACTCTGATAGTACCAGAGTGGAGGGCAGAATACCAAATGTCCAGGAACCAAAGAGCTGCACCTTGGTCTaGAGAGTGTTGCTCACCTCT +
Preference number: 4 (lower is better)
Translates to: YSDSTRVEGRIPNVQEPKSCTLV*RVLLTS
Trigger: AGAGGTGAGCAACACTCTTCAGACCAAGGTGCAGCT...CTTTGGTTCCTGGACATTTGGTATTCTGCCCTCCACTCTGGTACTATCAGAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR TCA 90 bp TACTCTGATAGTACCAGAGTGGAGGGCAGAATACCAAATGTCCAGGAACCAAAGGAGCGACTTGCTCACTaGGTTCAGATTGACCTTGAG +
Preference number: 4 (lower is better)
Translates to: YSDSTRVEGRIPNVQEPKERLAH*VQIDLE
Trigger: CTCAAGGTCAATCTGAACTCAGTGAGCAAGTCGCTC...CTTTGGTTCCTGGACATTTGGTATTCTGCCCTCCACTCTGGTACTATCAGAGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR GCA 90 bp CTTAGTTCAGATACAACATCCATGAAGCTGCCAGGTGTGAGGAGAGTTCCAGTGTTGGCTGAGTCTTTGTaGTTCTGTTCTGTCCTGAAG +
Preference number: 4 (lower is better)
Translates to: LSSDTTSMKLPGVRRVPVLAESL*FCSVLK
Trigger: CTTCAGGACAGAACAGAAGCACAAAGACTCAGCCAA...CACTGGAACTCTCCTCACACCTGGCAGCTTCATGGATGTTGTATCTGAACTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR CCA 90 bp AACTCTCTCAAGTCTACCCTGGCCTTCAAGCATGACATCCTTGCCTTGACCGCTAGGATAAATTTGGAGTaGGGGGTCTCTAAACAGATT +
Preference number: 4 (lower is better)
Translates to: NSLKSTLAFKHDILALTARINLE*GVSKQI
Trigger: AATCTGTTTAGAGACCCCCCACTCCAAATTTATCCT...AGCGGTCAAGGCAAGGATGTCATGCTTGAAGGCCAGGGTAGACTTGAGAGAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR TCA 90 bp TACTCTGATAGTACCAGAGTGGAGGGCAGAATACCAAATGTCCAGGAACCAAAGCAGACACTGATTTGCTaGCAGTGGAATGTGAACTCT +
Preference number: 4 (lower is better)
Translates to: YSDSTRVEGRIPNVQEPKQTLIC*QWNVNS
Trigger: AGAGTTCACATTCCACTGTCAGCAAATCAGTGTCTG...CTTTGGTTCCTGGACATTTGGTATTCTGCCCTCCACTCTGGTACTATCAGAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS CCA 90 bp GCAGGGCCAGCTCCCGGCCATCAAGGCTCTGGTGCAGCCTCCGGCTaGCGGCCTGACCCTCCTCACATTGCCGCCGTACCTCCTGCACCC +
Preference number: 5 (lower is better)
Translates to: AGPAPGHQGSGAASG*RPDPPHIAAVPPAP
Trigger: GGGTGCAGGAGGTACGGCGGCAATGTGAGGAGGGTCAGGCCGCCAGCCGGAGGCTGCACCAGAGCCTTGATGGCCGGGAGCTGGCCCTGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS GCA 90 bp GCTGCGTGGCTGGCCACCTGGCGTAGGAGGGCCTCGCTCCGGCTCTaGCAGGCCTTCACCTCTGCCACGAGGCTGTCCAGGATGGCTGAG +
Preference number: 5 (lower is better)
Translates to: AAWLATWRRRASLRL*QAFTSATRLSRMAE
Trigger: CTCAGCCATCCTGGACAGCCTCGTGGCAGAGGTGAAGGCCTGGCAGAGCCGGAGCGAGGCCCTCCTACGCCAGGTGGCCAGCCACGCAGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS TCA 90 bp AGCTCCCGGCCATCAAGGCTCTGGTGCAGCCTCCGGCTGGCGGCCTaGCCCTCCTCACATTGCCGCCGTACCTCCTGCACCCGCAGGTCA +
Preference number: 5 (lower is better)
Translates to: SSRPSRLWCSLRLAA*PSSHCRRTSCTRRS
Trigger: TGACCTGCGGGTGCAGGAGGTACGGCGGCAATGTGAGGAGGGTCAGGCCGCCAGCCGGAGGCTGCACCAGAGCCTTGATGGCCGGGAGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS GCA 90 bp AGGGCCAGGGAGGTGAGCGGGGATGGTGGGGCTTCCCGCAGCCGCTaGAGGTGGGCCTCATGGCCAAGTGCCAGCCCATGCACCTTGTCT +
Preference number: 5 (lower is better)
Translates to: RAREVSGDGGASRSR*RWASWPSASPCTLS
Trigger: AGACAAGGTGCATGGGCTGGCACTTGGCCATGAGGCCCACCTGCAGCGGCTGCGGGAAGCCCCACCATCCCCGCTCACCTCCCTGGCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS GCA 90 bp CAGTGGGCAAGCTGTCCAGGCCCGCGGCCAGCAGGCCCAGCCTCCTaGACGCACCCTCCACTTGTGCCACCCGCTGGTCAAAGTGTCCCA +
Preference number: 5 (lower is better)
Translates to: QWASCPGPRPAGPAS*THPPLVPPAGQSVP
Trigger: TGGGACACTTTGACCAGCGGGTGGCACAAGTGGAGGGTGCGTGCAGGAGGCTGGGCCTGCTGGCCGCGGGCCTGGACAGCTTGCCCACTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS CCA 90 bp TGGACCTCGGCCACAGTGCCATTGAGCTGCTGGAGCAGTGCTGCGTaGCTGGCCACCTGGCGTAGGAGGGCCTCGCTCCGGCTCTGCCAG +
Preference number: 5 (lower is better)
Translates to: WTSATVPLSCWSSAA*LATWRRRASLRLCQ
Trigger: CTGGCAGAGCCGGAGCGAGGCCCTCCTACGCCAGGTGGCCAGCCACGCAGCACTGCTCCAGCAGCTCAATGGCACTGTGGCCGAGGTCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS TCA 90 bp CCTGGCAGCGGCTCAGCCCACTGGCCACCTTGGCCACACCAGCCTTaGGTTGCTCCAGCTCCCCACGCAGGTTCAGGACCTGCCTGTGGC +
Preference number: 5 (lower is better)
Translates to: PGSGSAHWPPWPHQP*VAPAPHAGSGPACG
Trigger: GCCACAGGCAGGTCCTGAACCTGCGTGGGGAGCTGGAGCAACTCAAGGCTGGTGTGGCCAAGGTGGCCAGTGGGCTGAGCCGCTGCCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS GCA 90 bp CAGCGGCTCAGCCCACTGGCCACCTTGGCCACACCAGCCTTGAGTTaGTCCAGCTCCCCACGCAGGTTCAGGACCTGCCTGTGGCCAGCC +
Preference number: 5 (lower is better)
Translates to: QRLSPLATLATPALS*SSSPRRFRTCLWPA
Trigger: GGCTGGCCACAGGCAGGTCCTGAACCTGCGTGGGGAGCTGGAGCAACTCAAGGCTGGTGTGGCCAAGGTGGCCAGTGGGCTGAGCCGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS CCA 90 bp AGGGAGGTGAGCGGGGATGGTGGGGCTTCCCGCAGCCGCTGCAGGTaGGCCTCATGGCCAAGTGCCAGCCCATGCACCTTGTCTAGAAGC +
Preference number: 5 (lower is better)
Translates to: REVSGDGGASRSRCR*ASWPSASPCTLSRS
Trigger: GCTTCTAGACAAGGTGCATGGGCTGGCACTTGGCCATGAGGCCCACCTGCAGCGGCTGCGGGAAGCCCCACCATCCCCGCTCACCTCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS CCA 90 bp ACAGTGCCATTGAGCTGCTGGAGCAGTGCTGCGTGGCTGGCCACCTaGCGTAGGAGGGCCTCGCTCCGGCTCTGCCAGGCCTTCACCTCT +
Preference number: 5 (lower is better)
Translates to: TVPLSCWSSAAWLAT*RRRASLRLCQAFTS
Trigger: AGAGGTGAAGGCCTGGCAGAGCCGGAGCGAGGCCCTCCTACGCCAGGTGGCCAGCCACGCAGCACTGCTCCAGCAGCTCAATGGCACTGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS CCA 90 bp CCAGCGTACGATTCAGCTGGTCCACATGGCTCCACAGGCCCTCTCTaGGCCTCAGTGGCTCAGTGGGCAAGCTGTCCAGGCCCGCGGCCA +
Preference number: 5 (lower is better)
Translates to: PAYDSAGPHGSTGPL*ASVAQWASCPGPRP
Trigger: TGGCCGCGGGCCTGGACAGCTTGCCCACTGAGCCACTGAGGCCCAGAGAGGGCCTGTGGAGCCATGTGGACCAGCTGAATCGTACGCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS CCA 90 bp AGCGGGGATGGTGGGGCTTCCCGCAGCCGCTGCAGGTGGGCCTCATaGCCAAGTGCCAGCCCATGCACCTTGTCTAGAAGCTGCACCTTG +
Preference number: 5 (lower is better)
Translates to: SGDGGASRSRCRWAS*PSASPCTLSRSCTL
Trigger: CAAGGTGCAGCTTCTAGACAAGGTGCATGGGCTGGCACTTGGCCATGAGGCCCACCTGCAGCGGCTGCGGGAAGCCCCACCATCCCCGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS GCA 90 bp CGCCGTACCTCCTGCACCCGCAGGTCACACTCACTCTGGACGCCTTaGAGCTTCTGCTCAAAGCCATCCAGCAGGCTCCCCCAGAGTCGG +
Preference number: 5 (lower is better)
Translates to: RRTSCTRRSHSLWTP*SFCSKPSSRLPQSR
Trigger: CCGACTCTGGGGGAGCCTGCTGGATGGCTTTGAGCAGAAGCTGCAAGGCGTCCAGAGTGAGTGTGACCTGCGGGTGCAGGAGGTACGGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS CCA 90 bp GTCTGTACAAGGGGCCGAGCTGACCTGCCCGGAGAGGCGCTGTCATaGCTTAGCTCCCCAGCCAATGTTGCTAGGCGCTCCTCGAGGCTC +
Preference number: 5 (lower is better)
Translates to: VCTRGRADLPGEALS*LSSPANVARRSSRL
Trigger: GAGCCTCGAGGAGCGCCTAGCAACATTGGCTGGGGAGCTAAGCCATGACAGCGCCTCTCCGGGCAGGTCAGCTCGGCCCCTTGTACAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS CCA 90 bp TCCGGCTCTGCCAGGCCTTCACCTCTGCCACGAGGCTGTCCAGGATaGCTGAGGTGGTGCTCGGGGTGCACGAAGTCTCCAGTGAGACCA +
Preference number: 5 (lower is better)
Translates to: SGSARPSPLPRGCPG*LRWCSGCTKSPVRP
Trigger: TGGTCTCACTGGAGACTTCGTGCACCCCGAGCACCACCTCAGCCATCCTGGACAGCCTCGTGGCAGAGGTGAAGGCCTGGCAGAGCCGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR CAA 90 bp ACTGTGCATGGGTTTTGGTGGCTGGGACAGCCACGTGGAGGATTCCCTCAGTGGGGCACCGGGGCCCCTTaGGGTCTCGGTGACTGCCTG +
Preference number: 5 (lower is better)
Translates to: TVHGFWWLGQPRGGFPQWGTGAP*GLGDCL
Trigger: CAGGCAGTCACCGAGACCCAAAGGGGCCCCGGTGCC...CCACTGAGGGAATCCTCCACGTGGCTGTCCCAGCCACCAAAACCCATGCACAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS TCA 90 bp CCCTCCACTTGTGCCACCCGCTGGTCAAAGTGTCCCACTGTGTGCTaGAGTTTCTGGGCTGTGTCCTGGCAGCGGCTCAGCCCACTGGCC +
Preference number: 5 (lower is better)
Translates to: PSTCATRWSKCPTVC*SFWAVSWQRLSPLA
Trigger: GGCCAGTGGGCTGAGCCGCTGCCAGGACACAGCCCAGAAACTTCAGCACACAGTGGGACACTTTGACCAGCGGGTGGCACAAGTGGAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS CCA 90 bp GCCAGGCCTTCACCTCTGCCACGAGGCTGTCCAGGATGGCTGAGGTaGTGCTCGGGGTGCACGAAGTCTCCAGTGAGACCAACCGTTGCT +
Preference number: 5 (lower is better)
Translates to: ARPSPLPRGCPGWLR*CSGCTKSPVRPTVA
Trigger: AGCAACGGTTGGTCTCACTGGAGACTTCGTGCACCCCGAGCACCACCTCAGCCATCCTGGACAGCCTCGTGGCAGAGGTGAAGGCCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS TCA 90 bp GGATCCTCGTGGCTAGCCACCAGGCCACTGAGGGTACCATATGTTTaGGCCAGGCGCTGGACATCACCCTCCAGGCGTTCCAGCCGCTCA +
Preference number: 5 (lower is better)
Translates to: GSSWLATRPLRVPYV*ARRWTSPSRRSSRS
Trigger: TGAGCGGCTGGAACGCCTGGAGGGTGATGTCCAGCGCCTGGCTCAAACATATGGTACCCTCAGTGGCCTGGTGGCTAGCCACGAGGATCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS GCA 90 bp GCTCTAGCACAGCCAGCTCTGTCTGTACAAGGGGCCGAGCTGACCTaGCCGGAGAGGCGCTGTCATGGCTTAGCTCCCCAGCCAATGTTG +
Preference number: 5 (lower is better)
Translates to: ALAQPALSVQGAELT*PERRCHGLAPQPML
Trigger: CAACATTGGCTGGGGAGCTAAGCCATGACAGCGCCTCTCCGGGCAGGTCAGCTCGGCCCCTTGTACAGACAGAGCTGGCTGTGCTAGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR CAA 90 bp GTGGAGGATTCCCTCAGTGGCCTCCTTAGTGCCATTTGGGCTAGCCAGGGAAGGGCTCCCCAGCCAATGTaGCTAGGCGCTCCTCGAGGC +
Preference number: 5 (lower is better)
Translates to: VEDSLSGLLSAIWASQGRAPQPM*LGAPRG
Trigger: GCCTCGAGGAGCGCCTAGCAACATTGGCTGGGGAGC...CCTTCCCTGGCTAGCCCAAATGGCACTAAGGAGGCCACTGAGGGAATCCTCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS TCA 90 bp TGTCCAACCTCAGACAGCATCCCCTTGCTCCACCCTCTGTCCCATTaGGCGTCTCCAGACCCTCAAGCAGCCCGTCCACACCTCCCTCGA +
Preference number: 5 (lower is better)
Translates to: CPTSDSIPLLHPLSH*ASPDPQAARPHLPR
Trigger: TCGAGGGAGGTGTGGACGGGCTGCTTGAGGGTCTGGAGACGCTCAATGGGACAGAGGGTGGAGCAAGGGGATGCTGTCTGAGGTTGGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS GCA 90 bp GAGGTGGTGCTCGGGGTGCACGAAGTCTCCAGTGAGACCAACCGTTaGTCTAGCACAGCCAGCTCTGTCTGTACAAGGGGCCGAGCTGAC +
Preference number: 5 (lower is better)
Translates to: EVVLGVHEVSSETNR*SSTASSVCTRGRAD
Trigger: GTCAGCTCGGCCCCTTGTACAGACAGAGCTGGCTGTGCTAGAGCAACGGTTGGTCTCACTGGAGACTTCGTGCACCCCGAGCACCACCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR CAA 90 bp ACTGGCTGTGGGCCTGTAGGTCTCTGCACAGTTGCTGAGGCTGGTGCTGACTGCCCACCCTCTGTCCCATaGAGCGTCTCCAGACCCTCA +
Preference number: 5 (lower is better)
Translates to: TGCGPVGLCTVAEAGADCPPSVP*SVSRPS
Trigger: TGAGGGTCTGGAGACGCTCAATGGGACAGAGGGTGG...GCAGTCAGCACCAGCCTCAGCAACTGTGCAGAGACCTACAGGCCCACAGCCAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR CAA 90 bp GTGGAGGATTCCCTCAGTGGCCTCCTTAGTGCCATTTGGGCTAGCCAGGGAAGGCTGAAGCCTGGAGCCTaGGCTGCTGACCTGCTCCTG +
Preference number: 5 (lower is better)
Translates to: VEDSLSGLLSAIWASQGRLKPGA*AADLLL
Trigger: CAGGAGCAGGTCAGCAGCCAAGGCTCCAGGCTTCAG...CCTTCCCTGGCTAGCCCAAATGGCACTAAGGAGGCCACTGAGGGAATCCTCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR CAA 90 bp GGCATCACCTTCCTGCACAAACCTAGTCCTGATGGCTGCGAAGAGAAGCCGAGGGCCTGTCTAGTTGGCTaGCCCTGGCCGCACCTGCTC +
Preference number: 5 (lower is better)
Translates to: GITFLHKPSPDGCEEKPRACLVG*PWPHLL
Trigger: GAGCAGGTGCGGCCAGGGCAAGCCAACTAGACAGGC...CCTCGGCTTCTCTTCGCAGCCATCAGGACTAGGTTTGTGCAGGAAGGTGATGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR CAA 90 bp TACCAAATGTCCAGGAACCAAAGGCAGGGCTGTGGGGACCTGAAGAGCAGCACAACTGTCCCGGGGCACTaGGGCCCCCATCTACACTGC +
Preference number: 5 (lower is better)
Translates to: YQMSRNQRQGCGDLKSSTTVPGH*GPHLHC
Trigger: GCAGTGTAGATGGGGGCCCAAGTGCCCCGGGACAGT...TGTGCTGCTCTTCAGGTCCCCACAGCCCTGCCTTTGGTTCCTGGACATTTGGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR CAA 90 bp GACAAGGAACAGAAGCCACCAAGGGCTGTGGACTGTTGCTTGTGGGCACAGGGCCCACCAGTCATCCTGTaGGGATCCTCGTGGCTAGCC +
Preference number: 5 (lower is better)
Translates to: DKEQKPPRAVDCCLWAQGPPVIL*GSSWLA
Trigger: GGCTAGCCACGAGGATCCCAACAGGATGACTGGTGG...GCCCTGTGCCCACAAGCAACAGTCCACAGCCCTTGGTGGCTTCTGTTCCTTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR CAA 90 bp ACTGAGGCTGGGAGCCTCAGCAGAGACCGGTGTCAAGAGTCTCTGGGAACTGCATTGGCCACACCAGCCTaGAGTTGCTCCAGCTCCCCA +
Preference number: 5 (lower is better)
Translates to: TEAGSLSRDRCQESLGTALATPA*SCSSSP
Trigger: TGGGGAGCTGGAGCAACTCAAGGCTGGTGTGGCCAA...TGCAGTTCCCAGAGACTCTTGACACCGGTCTCTGCTGAGGCTCCCAGCCTCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR CAA 90 bp GACAAGGAACAGAAGCCACCAAGGGCTGTGGACTGTTGCTTGTGGGCACAGGGCGCCAGCCCATGCACCTaGTCTAGAAGCTGCACCTTG +
Preference number: 5 (lower is better)
Translates to: DKEQKPPRAVDCCLWAQGASPCT*SRSCTL
Trigger: CAAGGTGCAGCTTCTAGACAAGGTGCATGGGCTGGC...GCCCTGTGCCCACAAGCAACAGTCCACAGCCCTTGGTGGCTTCTGTTCCTTGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR CAA 90 bp AAACCTAGTCCTGATGGCTGCGAAGAGAAGCCGAGGGGACAAGGAACAGAAGCCCTGACCCTCCTCACATaGCCGCCGTACCTCCTGCAC +
Preference number: 5 (lower is better)
Translates to: KPSPDGCEEKPRGQGTEALTLLT*PPYLLH
Trigger: GTGCAGGAGGTACGGCGGCAATGTGAGGAGGGTCAG...GGCTTCTGTTCCTTGTCCCCTCGGCTTCTCTTCGCAGCCATCAGGACTAGGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR CAA 90 bp TCTACCCTGGCCTTCAAGCATGACATCCTTGCCTTGACCGCTGTCCGGAACTGTCACACCAGCCTTGAGTaGCTCCAGCTCCCCACGCAG +
Preference number: 5 (lower is better)
Translates to: STLAFKHDILALTAVRNCHTSLE*LQLPTQ
Trigger: CTGCGTGGGGAGCTGGAGCAACTCAAGGCTGGTGTG...ACAGTTCCGGACAGCGGTCAAGGCAAGGATGTCATGCTTGAAGGCCAGGGTAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR CAA 90 bp AAACCTAGTCCTGATGGCTGCGAAGAGAAGCCGAGGGGACAAGGAACAGAAGCCGCACGCACCCTCCACTaGTGCCACCCGCTGGTCAAA +
Preference number: 5 (lower is better)
Translates to: KPSPDGCEEKPRGQGTEAARTLH*CHPLVK
Trigger: TTTGACCAGCGGGTGGCACAAGTGGAGGGTGCGTGC...GGCTTCTGTTCCTTGTCCCCTCGGCTTCTCTTCGCAGCCATCAGGACTAGGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS CCA 90 bp CGCTCATCCAGGGACGTGTTGGCAGCCAAGAAGGCATCAGAGTACTaGCTGACAGAGTCACTGAGGCCTGTGAGCGACTTGCTCACTGAG +
Preference number: 5 (lower is better)
Translates to: RSSRDVLAAKKASEY*LTESLRPVSDLLTE
Trigger: CTCAGTGAGCAAGTCGCTCACAGGCCTCAGTGACTCTGTCAGCCAGTACTCTGATGCCTTCTTGGCTGCCAACACGTCCCTGGATGAGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR CAA 90 bp GACAAGGAACAGAAGCCACCAAGGGCTGTGGACTGTTGCTTGTGGGCACAGGGCTCATCCAGGGACGTGTaGGCAGCCAAGAAGGCATCA +
Preference number: 5 (lower is better)
Translates to: DKEQKPPRAVDCCLWAQGSSRDV*AAKKAS
Trigger: TGATGCCTTCTTGGCTGCCAACACGTCCCTGGATGA...GCCCTGTGCCCACAAGCAACAGTCCACAGCCCTTGGTGGCTTCTGTTCCTTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR CAA 90 bp GAAGCCGAGGGGACAAGGAACAGAAGCCACCAAGGGCTGTGGACTGTTGCTTGTGTGATGTTCCCCGAGTaGGTGGGATCTAGGGGTTGG +
Preference number: 5 (lower is better)
Translates to: EAEGTRNRSHQGLWTVACVMFPE*VGSRGW
Trigger: CCAACCCCTAGATCCCACCAACTCGGGGAACATCAC...ACAAGCAACAGTCCACAGCCCTTGGTGGCTTCTGTTCCTTGTCCCCTCGGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR CAA 90 bp ACTGAGGCTGGGAGCCTCAGCAGAGACCGGTGTCAAGAGTCTCTGGGAACTGCACATGACATCCTTGCCTaGACCGCTGTCCGGAACTGT +
Preference number: 5 (lower is better)
Translates to: TEAGSLSRDRCQESLGTAHDILA*TAVRNC
Trigger: ACAGTTCCGGACAGCGGTCAAGGCAAGGATGTCATG...TGCAGTTCCCAGAGACTCTTGACACCGGTCTCTGCTGAGGCTCCCAGCCTCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS GCA 90 bp GCCGGTATTCAGCCTTTACGTAGCTCTCCGCTCCCTCCTGTAGGATaGAGGTCACATTCCTGTGCACCACATAGGCACAGAGGGCCTTGT +
Preference number: 5 (lower is better)
Translates to: AGIQPLRSSPLPPVG*RSHSCAPHRHRGPC
Trigger: ACAAGGCCCTCTGTGCCTATGTGGTGCACAGGAATGTGACCTGCATCCTACAGGAGGGAGCGGAGAGCTACGTAAAGGCTGAATACCGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR CAA 90 bp ACTGGCTGTGGGCCTGTAGGTCTCTGCACAGTTGCTGAGGCTGGTGCTGACTGCCTCACCTCTGTCACCTaGCTTAGGATCTCGTCTAAG +
Preference number: 5 (lower is better)
Translates to: TGCGPVGLCTVAEAGADCLTSVT*LRISSK
Trigger: CTTAGACGAGATCCTAAGCAAGGTGACAGAGGTGAG...GCAGTCAGCACCAGCCTCAGCAACTGTGCAGAGACCTACAGGCCCACAGCCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR CAA 90 bp TCTACCCTGGCCTTCAAGCATGACATCCTTGCCTTGACCGCTGTCCGGAACTGTAAGGGCTGTGGACTGTaGCTTGTGGGCACAGGGCAA +
Preference number: 5 (lower is better)
Translates to: STLAFKHDILALTAVRNCKGCGL*LVGTGQ
Trigger: TTGCCCTGTGCCCACAAGCAACAGTCCACAGCCCTT...ACAGTTCCGGACAGCGGTCAAGGCAAGGATGTCATGCTTGAAGGCCAGGGTAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR CAA 90 bp TACCAAATGTCCAGGAACCAAAGGCAGGGCTGTGGGGACCTGAAGAGCAGCACACCATCCATACGGGCATaGATCAAGGCTAGTTGCCCA +
Preference number: 5 (lower is better)
Translates to: YQMSRNQRQGCGDLKSSTPSIRA*IKASCP
Trigger: TGGGCAACTAGCCTTGATCAATGCCCGTATGGATGG...TGTGCTGCTCTTCAGGTCCCCACAGCCCTGCCTTTGGTTCCTGGACATTTGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR CAA 90 bp TACCAAATGTCCAGGAACCAAAGGCAGGGCTGTGGGGACCTGAAGAGCAGCACAAGGCCTGTGAGCGACTaGCTCACTGAGTTCAGATTG +
Preference number: 5 (lower is better)
Translates to: YQMSRNQRQGCGDLKSSTRPVSD*LTEFRL
Trigger: CAATCTGAACTCAGTGAGCAAGTCGCTCACAGGCCT...TGTGCTGCTCTTCAGGTCCCCACAGCCCTGCCTTTGGTTCCTGGACATTTGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR CAA 90 bp AGGGGACAAGGAACAGAAGCCACCAAGGGCTGTGGACTGTTGCTTGTGGGCACACTCTTGGCTGAGTCTTaGTGCTTCTGTTCTGTCCTG +
Preference number: 5 (lower is better)
Translates to: RGQGTEATKGCGLLLVGTLLAES*CFCSVL
Trigger: CAGGACAGAACAGAAGCACAAAGACTCAGCCAAGAG...TGTGCCCACAAGCAACAGTCCACAGCCCTTGGTGGCTTCTGTTCCTTGTCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR CAA 90 bp TGCGAAGAGAAGCCGAGGGGACAAGGAACAGAAGCCACCAAGGGCTGTGGACTGGGGTCTCTAAACAGATaGCCTGGATTCCGTTCTTTC +
Preference number: 5 (lower is better)
Translates to: CEEKPRGQGTEATKGCGLGSLNR*PGFRSF
Trigger: GAAAGAACGGAATCCAGGCAATCTGTTTAGAGACCC...CAGTCCACAGCCCTTGGTGGCTTCTGTTCCTTGTCCCCTCGGCTTCTCTTCGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS TCA 90 bp CCAAGTGCCAGCCCATGCACCTTGTCTAGAAGCTGCACCTTGGTCTaGAGAGTGTTGCTCACCTCTGTCACCTTGCTTAGGATCTCGTCT +
Preference number: 5 (lower is better)
Translates to: PSASPCTLSRSCTLV*RVLLTSVTLLRISS
Trigger: AGACGAGATCCTAAGCAAGGTGACAGAGGTGAGCAACACTCTTCAGACCAAGGTGCAGCTTCTAGACAAGGTGCATGGGCTGGCACTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS GCA 90 bp GCCCATGCACCTTGTCTAGAAGCTGCACCTTGGTCTGAAGAGTGTTaGTCACCTCTGTCACCTTGCTTAGGATCTCGTCTAAGGGAGGTG +
Preference number: 5 (lower is better)
Translates to: AHAPCLEAAPWSEEC*SPLSPCLGSRLREV
Trigger: CACCTCCCTTAGACGAGATCCTAAGCAAGGTGACAGAGGTGAGCAACACTCTTCAGACCAAGGTGCAGCTTCTAGACAAGGTGCATGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS CCA 90 bp CATGGCCAAGTGCCAGCCCATGCACCTTGTCTAGAAGCTGCACCTTaGTCTGAAGAGTGTTGCTCACCTCTGTCACCTTGCTTAGGATCT +
Preference number: 5 (lower is better)
Translates to: HGQVPAHAPCLEAAP*SEECCSPLSPCLGS
Trigger: AGATCCTAAGCAAGGTGACAGAGGTGAGCAACACTCTTCAGACCAAGGTGCAGCTTCTAGACAAGGTGCATGGGCTGGCACTTGGCCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR CAA 90 bp TACCAAATGTCCAGGAACCAAAGGCAGGGCTGTGGGGACCTGAAGAGCAGCACAGAGTTCAGATTGACCTaGAGCAGAGTGATCTCGCCT +
Preference number: 5 (lower is better)
Translates to: YQMSRNQRQGCGDLKSSTEFRLT*SRVISP
Trigger: AGGCGAGATCACTCTGCTCAAGGTCAATCTGAACTC...TGTGCTGCTCTTCAGGTCCCCACAGCCCTGCCTTTGGTTCCTGGACATTTGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR CAA 90 bp CTTAGTTCAGATACAACATCCATGAAGCTGCCAGGTGTGAGGAGAGTTCCAGTGACTTCGGCTTCCACCTaGCGTTCCCGCTCATCCAGG +
Preference number: 5 (lower is better)
Translates to: LSSDTTSMKLPGVRRVPVTSAST*RSRSSR
Trigger: CCTGGATGAGCGGGAACGCAAGGTGGAAGCCGAAGT...CACTGGAACTCTCCTCACACCTGGCAGCTTCATGGATGTTGTATCTGAACTAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR CAA 90 bp AAACCTAGTCCTGATGGCTGCGAAGAGAAGCCGAGGGGACAAGGAACAGAAGCCCTCACTGAGTTCAGATaGACCTTGAGCAGAGTGATC +
Preference number: 5 (lower is better)
Translates to: KPSPDGCEEKPRGQGTEALTEFR*TLSRVI
Trigger: GATCACTCTGCTCAAGGTCAATCTGAACTCAGTGAG...GGCTTCTGTTCCTTGTCCCCTCGGCTTCTCTTCGCAGCCATCAGGACTAGGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR CAA 90 bp CTTAGTTCAGATACAACATCCATGAAGCTGCCAGGTGTGAGGAGAGTTCCAGTGGAGGGTACCATATGTTaGAGCCAGGCGCTGGACATC +
Preference number: 5 (lower is better)
Translates to: LSSDTTSMKLPGVRRVPVEGTIC*SQALDI
Trigger: GATGTCCAGCGCCTGGCTCAAACATATGGTACCCTC...CACTGGAACTCTCCTCACACCTGGCAGCTTCATGGATGTTGTATCTGAACTAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR CAA 90 bp GGCATCACCTTCCTGCACAAACCTAGTCCTGATGGCTGCGAAGAGAAGCCGAGGTTTTCAAGTTGTCCATaGATGGTTTCGTACCTGAAT +
Preference number: 5 (lower is better)
Translates to: GITFLHKPSPDGCEEKPRFSSCP*MVSYLN
Trigger: ATTCAGGTACGAAACCATCAATGGACAACTTGAAAA...CCTCGGCTTCTCTTCGCAGCCATCAGGACTAGGTTTGTGCAGGAAGGTGATGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS-3UTR CAA 90 bp AGGGGACAAGGAACAGAAGCCACCAAGGGCTGTGGACTGTTGCTTGTGGGCACAACATGCATTTTCAAGTaGTCCATTGATGGTTTCGTA +
Preference number: 5 (lower is better)
Translates to: RGQGTEATKGCGLLLVGTTCIFK*SIDGFV
Trigger: TACGAAACCATCAATGGACAACTTGAAAATGCATGT...TGTGCCCACAAGCAACAGTCCACAGCCCTTGGTGGCTTCTGTTCCTTGTCCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS GCA 72 bp GAGGTGAGCGGGGATGGTGGGGCTTCCCGCAGCCGCTaGAGGTGGGCCTCATGGCCAAGTGCCAGCCCATGC +
Preference number: 6 (lower is better)
Translates to: EVSGDGGASRSR*RWASWPSASPC
Trigger: GCATGGGCTGGCACTTGGCCATGAGGCCCACCTGCAGCGGCTGCGGGAAGCCCCACCATCCCCGCTCACCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS GCA 72 bp CTGGCCACCTGGCGTAGGAGGGCCTCGCTCCGGCTCTaGCAGGCCTTCACCTCTGCCACGAGGCTGTCCAGG +
Preference number: 6 (lower is better)
Translates to: LATWRRRASLRL*QAFTSATRLSR
Trigger: CCTGGACAGCCTCGTGGCAGAGGTGAAGGCCTGGCAGAGCCGGAGCGAGGCCCTCCTACGCCAGGTGGCCAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS CCA 72 bp TTGAGCTGCTGGAGCAGTGCTGCGTGGCTGGCCACCTaGCGTAGGAGGGCCTCGCTCCGGCTCTGCCAGGCC +
Preference number: 6 (lower is better)
Translates to: LSCWSSAAWLAT*RRRASLRLCQA
Trigger: GGCCTGGCAGAGCCGGAGCGAGGCCCTCCTACGCCAGGTGGCCAGCCACGCAGCACTGCTCCAGCAGCTCAA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS CCA 72 bp AGCGGGGATGGTGGGGCTTCCCGCAGCCGCTGCAGGTaGGCCTCATGGCCAAGTGCCAGCCCATGCACCTTG +
Preference number: 6 (lower is better)
Translates to: SGDGGASRSRCR*ASWPSASPCTL
Trigger: CAAGGTGCATGGGCTGGCACTTGGCCATGAGGCCCACCTGCAGCGGCTGCGGGAAGCCCCACCATCCCCGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS CAA 72 bp GTGCAGCCTCCGGCTGGCGGCCTGACCCTCCTCACATaGCCGCCGTACCTCCTGCACCCGCAGGTCACACTC +
Preference number: 6 (lower is better)
Translates to: VQPPAGGLTLLT*PPYLLHPQVTL
Trigger: GAGTGTGACCTGCGGGTGCAGGAGGTACGGCGGCAATGTGAGGAGGGTCAGGCCGCCAGCCGGAGGCTGCAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS CAA 90 bp GCAGCGGCTCAGCCCACTGGCCACCTTGGCCACACCAGCCTTGAGTaGCTCCAGCTCCCCACGCAGGTTCAGGACCTGCCTGTGGCCAGC +
Preference number: 6 (lower is better)
Translates to: AAAQPTGHLGHTSLE*LQLPTQVQDLPVAS
Trigger: GCTGGCCACAGGCAGGTCCTGAACCTGCGTGGGGAGCTGGAGCAACTCAAGGCTGGTGTGGCCAAGGTGGCCAGTGGGCTGAGCCGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS CAA 90 bp TCCTGGCAGCGGCTCAGCCCACTGGCCACCTTGGCCACACCAGCCTaGAGTTGCTCCAGCTCCCCACGCAGGTTCAGGACCTGCCTGTGG +
Preference number: 6 (lower is better)
Translates to: SWQRLSPLATLATPA*SCSSSPRRFRTCLW
Trigger: CCACAGGCAGGTCCTGAACCTGCGTGGGGAGCTGGAGCAACTCAAGGCTGGTGTGGCCAAGGTGGCCAGTGGGCTGAGCCGCTGCCAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS TCA 72 bp TGGCTCTGTCTCCTGGGCCCACAAGCCCCTCAGGGATaGCCCCAAAGCCCACAGGGACAGCAGGAGCCCTGG +
Preference number: 6 (lower is better)
Translates to: WLCLLGPQAPQG*PQSPQGQQEPW
Trigger: CCAGGGCTCCTGCTGTCCCTGTGGGCTTTGGGGTCATCCCTGAGGGGCTTGTGGGCCCAGGAGACAGAGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS GCA 72 bp TGCTCAAAGCCATCCAGCAGGCTCCCCCAGAGTCGGTaGAGCCGTCGGTCCACGTACTCCTCCAGCAGGGCC +
Preference number: 6 (lower is better)
Translates to: CSKPSSRLPQSR*SRRSTYSSSRA
Trigger: GGCCCTGCTGGAGGAGTACGTGGACCGACGGCTGCACCGACTCTGGGGGAGCCTGCTGGATGGCTTTGAGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS GCA 72 bp AGCTGTCCCTGGACCTCGGCCACAGTGCCATTGAGCTaGTGGAGCAGTGCTGCGTGGCTGGCCACCTGGCGT +
Preference number: 6 (lower is better)
Translates to: SCPWTSATVPLS*WSSAAWLATWR
Trigger: ACGCCAGGTGGCCAGCCACGCAGCACTGCTCCAGCAGCTCAATGGCACTGTGGCCGAGGTCCAGGGACAGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS CCA 72 bp GGTGGGGCTTCCCGCAGCCGCTGCAGGTGGGCCTCATaGCCAAGTGCCAGCCCATGCACCTTGTCTAGAAGC +
Preference number: 6 (lower is better)
Translates to: GGASRSRCRWAS*PSASPCTLSRS
Trigger: GCTTCTAGACAAGGTGCATGGGCTGGCACTTGGCCATGAGGCCCACCTGCAGCGGCTGCGGGAAGCCCCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS CCA 72 bp AGGGGCCGAGCTGACCTGCCCGGAGAGGCGCTGTCATaGCTTAGCTCCCCAGCCAATGTTGCTAGGCGCTCC +
Preference number: 6 (lower is better)
Translates to: RGRADLPGEALS*LSSPANVARRS
Trigger: GGAGCGCCTAGCAACATTGGCTGGGGAGCTAAGCCATGACAGCGCCTCTCCGGGCAGGTCAGCTCGGCCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS CCA 72 bp TGTCCCTGGACCTCGGCCACAGTGCCATTGAGCTGCTaGAGCAGTGCTGCGTGGCTGGCCACCTGGCGTAGG +
Preference number: 6 (lower is better)
Translates to: CPWTSATVPLSC*SSAAWLATWRR
Trigger: CCTACGCCAGGTGGCCAGCCACGCAGCACTGCTCCAGCAGCTCAATGGCACTGTGGCCGAGGTCCAGGGACA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS TCA 72 bp GGCTCAGCCCACTGGCCACCTTGGCCACACCAGCCTTaGGTTGCTCCAGCTCCCCACGCAGGTTCAGGACCT +
Preference number: 6 (lower is better)
Translates to: GSAHWPPWPHQP*VAPAPHAGSGP
Trigger: AGGTCCTGAACCTGCGTGGGGAGCTGGAGCAACTCAAGGCTGGTGTGGCCAAGGTGGCCAGTGGGCTGAGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS GCA 72 bp CAGCCAGCTCTGTCTGTACAAGGGGCCGAGCTGACCTaGCCGGAGAGGCGCTGTCATGGCTTAGCTCCCCAG +
Preference number: 6 (lower is better)
Translates to: QPALSVQGAELT*PERRCHGLAPQ
Trigger: CTGGGGAGCTAAGCCATGACAGCGCCTCTCCGGGCAGGTCAGCTCGGCCCCTTGTACAGACAGAGCTGGCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS CCA 72 bp GCCAGGCCTTCACCTCTGCCACGAGGCTGTCCAGGATaGCTGAGGTGGTGCTCGGGGTGCACGAAGTCTCCA +
Preference number: 6 (lower is better)
Translates to: ARPSPLPRGCPG*LRWCSGCTKSP
Trigger: TGGAGACTTCGTGCACCCCGAGCACCACCTCAGCCATCCTGGACAGCCTCGTGGCAGAGGTGAAGGCCTGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS CAA 72 bp CAGCCCACTGGCCACCTTGGCCACACCAGCCTTGAGTaGCTCCAGCTCCCCACGCAGGTTCAGGACCTGCCT +
Preference number: 6 (lower is better)
Translates to: QPTGHLGHTSLE*LQLPTQVQDLP
Trigger: AGGCAGGTCCTGAACCTGCGTGGGGAGCTGGAGCAACTCAAGGCTGGTGTGGCCAAGGTGGCCAGTGGGCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS CAA 90 bp ACCTGCCCGGAGAGGCGCTGTCATGGCTTAGCTCCCCAGCCAATGTaGCTAGGCGCTCCTCGAGGCTCTGCACGCGCTCTTCCAGCATGG +
Preference number: 6 (lower is better)
Translates to: TCPERRCHGLAPQPM*LGAPRGSARALPAW
Trigger: CCATGCTGGAAGAGCGCGTGCAGAGCCTCGAGGAGCGCCTAGCAACATTGGCTGGGGAGCTAAGCCATGACAGCGCCTCTCCGGGCAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS GCA 72 bp CCTCTGCCACGAGGCTGTCCAGGATGGCTGAGGTGGTaGTCGGGGTGCACGAAGTCTCCAGTGAGACCAACC +
Preference number: 6 (lower is better)
Translates to: PLPRGCPGWLRW*SGCTKSPVRPT
Trigger: GGTTGGTCTCACTGGAGACTTCGTGCACCCCGAGCACCACCTCAGCCATCCTGGACAGCCTCGTGGCAGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS GCA 72 bp CCTGCTCCTGGATGGCCTGGACTTCGGCTTCCACCTTaGGTTCCCGCTCATCCAGGGACGTGTTGGCAGCCA +
Preference number: 6 (lower is better)
Translates to: PAPGWPGLRLPP*VPAHPGTCWQP
Trigger: TGGCTGCCAACACGTCCCTGGATGAGCGGGAACGCAAGGTGGAAGCCGAAGTCCAGGCCATCCAGGAGCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS CCA 72 bp CTGGAGCCTTGGCTGCTGACCTGCTCCTGGATGGCCTaGACTTCGGCTTCCACCTTGCGTTCCCGCTCATCC +
Preference number: 6 (lower is better)
Translates to: LEPWLLTCSWMA*TSASTLRSRSS
Trigger: GGATGAGCGGGAACGCAAGGTGGAAGCCGAAGTCCAGGCCATCCAGGAGCAGGTCAGCAGCCAAGGCTCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS CCA 72 bp ATGTCCTGCGTGTGCTGGGCCAGCGTACGATTCAGCTaGTCCACATGGCTCCACAGGCCCTCTCTGGGCCTC +
Preference number: 6 (lower is better)
Translates to: MSCVCWASVRFS*STWLHRPSLGL
Trigger: GAGGCCCAGAGAGGGCCTGTGGAGCCATGTGGACCAGCTGAATCGTACGCTGGCCCAGCACACGCAGGACAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS CCA 72 bp AGGTCATCCCGGAGGCGGGCAATGTCCTGCGTGTGCTaGGCCAGCGTACGATTCAGCTGGTCCACATGGCTC +
Preference number: 6 (lower is better)
Translates to: RSSRRRAMSCVC*ASVRFSWSTWL
Trigger: GAGCCATGTGGACCAGCTGAATCGTACGCTGGCCCAGCACACGCAGGACATTGCCCGCCTCCGGGATGACCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS CAA 72 bp ACCTGCTCCTGGATGGCCTGGACTTCGGCTTCCACCTaGCGTTCCCGCTCATCCAGGGACGTGTTGGCAGCC +
Preference number: 6 (lower is better)
Translates to: TCSWMAWTSAST*RSRSSRDVLAA
Trigger: GGCTGCCAACACGTCCCTGGATGAGCGGGAACGCAAGGTGGAAGCCGAAGTCCAGGCCATCCAGGAGCAGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS CAA 90 bp GGGATCCTCGTGGCTAGCCACCAGGCCACTGAGGGTACCATATGTTaGAGCCAGGCGCTGGACATCACCCTCCAGGCGTTCCAGCCGCTC +
Preference number: 6 (lower is better)
Translates to: GILVASHQATEGTIC*SQALDITLQAFQPL
Trigger: GAGCGGCTGGAACGCCTGGAGGGTGATGTCCAGCGCCTGGCTCAAACATATGGTACCCTCAGTGGCCTGGTGGCTAGCCACGAGGATCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS CAA 90 bp TGGCTGCTGACCTGCTCCTGGATGGCCTGGACTTCGGCTTCCACCTaGCGTTCCCGCTCATCCAGGGACGTGTTGGCAGCCAAGAAGGCA +
Preference number: 6 (lower is better)
Translates to: WLLTCSWMAWTSAST*RSRSSRDVLAAKKA
Trigger: TGCCTTCTTGGCTGCCAACACGTCCCTGGATGAGCGGGAACGCAAGGTGGAAGCCGAAGTCCAGGCCATCCAGGAGCAGGTCAGCAGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS GCA 72 bp TCCTGCACCCGCAGGTCACACTCACTCTGGACGCCTTaGAGCTTCTGCTCAAAGCCATCCAGCAGGCTCCCC +
Preference number: 6 (lower is better)
Translates to: SCTRRSHSLWTP*SFCSKPSSRLP
Trigger: GGGGAGCCTGCTGGATGGCTTTGAGCAGAAGCTGCAAGGCGTCCAGAGTGAGTGTGACCTGCGGGTGCAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS CCA 72 bp TCACCTCTGCCACGAGGCTGTCCAGGATGGCTGAGGTaGTGCTCGGGGTGCACGAAGTCTCCAGTGAGACCA +
Preference number: 6 (lower is better)
Translates to: SPLPRGCPGWLR*CSGCTKSPVRP
Trigger: TGGTCTCACTGGAGACTTCGTGCACCCCGAGCACCACCTCAGCCATCCTGGACAGCCTCGTGGCAGAGGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS CAA 72 bp GAGAGGCGCTGTCATGGCTTAGCTCCCCAGCCAATGTaGCTAGGCGCTCCTCGAGGCTCTGCACGCGCTCTT +
Preference number: 6 (lower is better)
Translates to: ERRCHGLAPQPM*LGAPRGSARAL
Trigger: AAGAGCGCGTGCAGAGCCTCGAGGAGCGCCTAGCAACATTGGCTGGGGAGCTAAGCCATGACAGCGCCTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS CAA 90 bp ATGTCCAACCTCAGACAGCATCCCCTTGCTCCACCCTCTGTCCCATaGAGCGTCTCCAGACCCTCAAGCAGCCCGTCCACACCTCCCTCG +
Preference number: 6 (lower is better)
Translates to: MSNLRQHPLAPPSVP*SVSRPSSSPSTPPS
Trigger: CGAGGGAGGTGTGGACGGGCTGCTTGAGGGTCTGGAGACGCTCAATGGGACAGAGGGTGGAGCAAGGGGATGCTGTCTGAGGTTGGACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS TCA 72 bp TGGCTAGCCACCAGGCCACTGAGGGTACCATATGTTTaGGCCAGGCGCTGGACATCACCCTCCAGGCGTTCC +
Preference number: 6 (lower is better)
Translates to: WLATRPLRVPYV*ARRWTSPSRRS
Trigger: GGAACGCCTGGAGGGTGATGTCCAGCGCCTGGCTCAAACATATGGTACCCTCAGTGGCCTGGTGGCTAGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS TCA 72 bp TCAGACAGCATCCCCTTGCTCCACCCTCTGTCCCATTaGGCGTCTCCAGACCCTCAAGCAGCCCGTCCACAC +
Preference number: 6 (lower is better)
Translates to: SDSIPLLHPLSH*ASPDPQAARPH
Trigger: GTGTGGACGGGCTGCTTGAGGGTCTGGAGACGCTCAATGGGACAGAGGGTGGAGCAAGGGGATGCTGTCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS TCA 72 bp TGTGCCACCCGCTGGTCAAAGTGTCCCACTGTGTGCTaGAGTTTCTGGGCTGTGTCCTGGCAGCGGCTCAGC +
Preference number: 6 (lower is better)
Translates to: CATRWSKCPTVC*SFWAVSWQRLS
Trigger: GCTGAGCCGCTGCCAGGACACAGCCCAGAAACTTCAGCACACAGTGGGACACTTTGACCAGCGGGTGGCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS CCA 72 bp GCCCTGGGGCCACCAGTCATCCTGTTGGGATCCTCGTaGCTAGCCACCAGGCCACTGAGGGTACCATATGTT +
Preference number: 6 (lower is better)
Translates to: ALGPPVILLGSS*LATRPLRVPYV
Trigger: AACATATGGTACCCTCAGTGGCCTGGTGGCTAGCCACGAGGATCCCAACAGGATGACTGGTGGCCCCAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS CAA 72 bp GTGGCTAGCCACCAGGCCACTGAGGGTACCATATGTTaGAGCCAGGCGCTGGACATCACCCTCCAGGCGTTC +
Preference number: 6 (lower is better)
Translates to: VASHQATEGTIC*SQALDITLQAF
Trigger: GAACGCCTGGAGGGTGATGTCCAGCGCCTGGCTCAAACATATGGTACCCTCAGTGGCCTGGTGGCTAGCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS CAA 72 bp CTCAGACAGCATCCCCTTGCTCCACCCTCTGTCCCATaGAGCGTCTCCAGACCCTCAAGCAGCCCGTCCACA +
Preference number: 6 (lower is better)
Translates to: LRQHPLAPPSVP*SVSRPSSSPST
Trigger: TGTGGACGGGCTGCTTGAGGGTCTGGAGACGCTCAATGGGACAGAGGGTGGAGCAAGGGGATGCTGTCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS CAA 72 bp CTGAGTACTGTGCGGTACGTGACTGTCCCGGGGCACTaGGGCCCCCATCTACACTGCCGGTATTCAGCCTTT +
Preference number: 6 (lower is better)
Translates to: LSTVRYVTVPGH*GPHLHCRYSAF
Trigger: AAAGGCTGAATACCGGCAGTGTAGATGGGGGCCCAAGTGCCCCGGGACAGTCACGTACCGCACAGTACTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS CAA 90 bp TGGACTTCGGCTTCCACCTTGCGTTCCCGCTCATCCAGGGACGTGTaGGCAGCCAAGAAGGCATCAGAGTACTGGCTGACAGAGTCACTG +
Preference number: 6 (lower is better)
Translates to: WTSASTLRSRSSRDV*AAKKASEYWLTESL
Trigger: CAGTGACTCTGTCAGCCAGTACTCTGATGCCTTCTTGGCTGCCAACACGTCCCTGGATGAGCGGGAACGCAAGGTGGAAGCCGAAGTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS TCA 72 bp CAGATTGACCTTGAGCAGAGTGATCTCGCCTTGAAGTaGGCTGCCCGTCCCTTCTGCCAGCTGTCCCTGGAC +
Preference number: 6 (lower is better)
Translates to: QIDLEQSDLALK*AARPFCQLSLD
Trigger: GTCCAGGGACAGCTGGCAGAAGGGACGGGCAGCTCACTTCAAGGCGAGATCACTCTGCTCAAGGTCAATCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS TCA 72 bp GAGTTCAGATTGACCTTGAGCAGAGTGATCTCGCCTTaGAGTGAGCTGCCCGTCCCTTCTGCCAGCTGTCCC +
Preference number: 6 (lower is better)
Translates to: EFRLTLSRVISP*SELPVPSASCP
Trigger: GGGACAGCTGGCAGAAGGGACGGGCAGCTCACTTCAAGGCGAGATCACTCTGCTCAAGGTCAATCTGAACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS CCA 72 bp AGGGACGTGTTGGCAGCCAAGAAGGCATCAGAGTACTaGCTGACAGAGTCACTGAGGCCTGTGAGCGACTTG +
Preference number: 6 (lower is better)
Translates to: RDVLAAKKASEY*LTESLRPVSDL
Trigger: CAAGTCGCTCACAGGCCTCAGTGACTCTGTCAGCCAGTACTCTGATGCCTTCTTGGCTGCCAACACGTCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS GCA 72 bp CAGCCTTTACGTAGCTCTCCGCTCCCTCCTGTAGGATaGAGGTCACATTCCTGTGCACCACATAGGCACAGA +
Preference number: 6 (lower is better)
Translates to: QPLRSSPLPPVG*RSHSCAPHRHR
Trigger: TCTGTGCCTATGTGGTGCACAGGAATGTGACCTGCATCCTACAGGAGGGAGCGGAGAGCTACGTAAAGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS CCA 72 bp GTGCCAGCCCATGCACCTTGTCTAGAAGCTGCACCTTaGTCTGAAGAGTGTTGCTCACCTCTGTCACCTTGC +
Preference number: 6 (lower is better)
Translates to: VPAHAPCLEAAP*SEECCSPLSPC
Trigger: GCAAGGTGACAGAGGTGAGCAACACTCTTCAGACCAAGGTGCAGCTTCTAGACAAGGTGCATGGGCTGGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS TCA 72 bp GACAGAGTCACTGAGGCCTGTGAGCGACTTGCTCACTaGGTTCAGATTGACCTTGAGCAGAGTGATCTCGCC +
Preference number: 6 (lower is better)
Translates to: DRVTEACERLAH*VQIDLEQSDLA
Trigger: GGCGAGATCACTCTGCTCAAGGTCAATCTGAACTCAGTGAGCAAGTCGCTCACAGGCCTCAGTGACTCTGTC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS CAA 90 bp GCATCAGAGTACTGGCTGACAGAGTCACTGAGGCCTGTGAGCGACTaGCTCACTGAGTTCAGATTGACCTTGAGCAGAGTGATCTCGCCT +
Preference number: 6 (lower is better)
Translates to: ASEYWLTESLRPVSD*LTEFRLTLSRVISP
Trigger: AGGCGAGATCACTCTGCTCAAGGTCAATCTGAACTCAGTGAGCAAGTCGCTCACAGGCCTCAGTGACTCTGTCAGCCAGTACTCTGATGC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS CAA 72 bp TACTGGCTGACAGAGTCACTGAGGCCTGTGAGCGACTaGCTCACTGAGTTCAGATTGACCTTGAGCAGAGTG +
Preference number: 6 (lower is better)
Translates to: YWLTESLRPVSD*LTEFRLTLSRV
Trigger: CACTCTGCTCAAGGTCAATCTGAACTCAGTGAGCAAGTCGCTCACAGGCCTCAGTGACTCTGTCAGCCAGTA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4
CDS GCA 72 bp CCTTGTCTAGAAGCTGCACCTTGGTCTGAAGAGTGTTaGTCACCTCTGTCACCTTGCTTAGGATCTCGTCTA +
Preference number: 6 (lower is better)
Translates to: PCLEAAPWSEEC*SPLSPCLGSRL
Trigger: TAGACGAGATCCTAAGCAAGGTGACAGAGGTGAGCAACACTCTTCAGACCAAGGTGCAGCTTCTAGACAAGG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332312.4