RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EMID1 (Homo sapiens)

Ensembl gene IDs: ENSG00000186998

Ensembl transcript IDs: ENST00000334018.11, ENST00000404755.7, ENST00000404820.7, ENST00000429226.5, ENST00000430127.1, ENST00000433143.1, ENST00000435427.5, ENST00000473933.1, ENST00000484039.5, ENST00000487477.1, ENST00000488820.6

Found 355 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCCAACCTGAGATGCGGGAGGGCCTGGGGGCTCAGAGGGAAGAACTaGGGCAAGAAGCCCCCGGTGATCCAGTCAGAGGATTGGGCAGCC +
Preference number: 1 (lower is better)
Translates to: PNLRCGRAWGLRGKN*GKKPPVIQSEDWAA
Trigger: GGCTGCCCAATCCTCTGACTGGATCACCGGGGGCTTCTTGCCTCAGTTCTTCCCTCTGAGCCCCCAGGCCCTCCCGCATCTCAGGTTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
3UTR TCA 90 bp CCTGACTCCCTCAGTGCCTTTGGGCCTGGATGCTCAGACAGCAGATaGGACGAAGCCTTGTACCTCTATCCCTCCTTGAAGGCCTGCCTC +
Preference number: 1 (lower is better)
Translates to: PDSLSAFGPGCSDSR*DEALYLYPSLKACL
Trigger: GAGGCAGGCCTTCAAGGAGGGATAGAGGTACAAGGCTTCGTCTCATCTGCTGTCTGAGCATCCAGGCCCAAAGGCACTGAGGGAGTCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
3UTR CCA 90 bp GGGAATCAGGTAGGGGCCTTTATTGGCCAGCACACATCTACCTCCTaGCATCTGTCACAAGCATTTGCAGGAGTAGGCGGCCCCTTCCTC +
Preference number: 1 (lower is better)
Translates to: GNQVGAFIGQHTSTS*HLSQAFAGVGGPFL
Trigger: GAGGAAGGGGCCGCCTACTCCTGCAAATGCTTGTGACAGATGCCAGGAGGTAGATGTGTGCTGGCCAATAAAGGCCCCTACCTGATTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
3UTR-3UTR GCA 90 bp TGTGGACCTGGTGGGCCTCTCATCCCCATTGGGCCCCGACTGCCGGCATCTCCCCTCCATCTCCGGGGCTaGCCTGGGCAGGAGGGGGAC +
Preference number: 2 (lower is better)
Translates to: CGPGGPLIPIGPRLPASPLHLRG*PGQEGD
Trigger: GTCCCCCTCCTGCCCAGGGCAGCCCCGGAGATGGAG...GGGAGATGCCGGCAGTCGGGGCCCAATGGGGATGAGAGGCCCACCAGGTCCACA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000435427.5
3UTR-3UTR CCA 90 bp CCTGTGGACCTGGTGGGCCTCTCATCCCCATTGGGCCCCGACTGCCGGCATCTCGCACCGACTTGGTCCTaGAGGCCTCCATCTCCGGGG +
Preference number: 2 (lower is better)
Translates to: PVDLVGLSSPLGPDCRHLAPTWS*RPPSPG
Trigger: CCCCGGAGATGGAGGCCTCCAGGACCAAGTCGGTGC...GAGATGCCGGCAGTCGGGGCCCAATGGGGATGAGAGGCCCACCAGGTCCACAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435427.5
3UTR-3UTR CCA 90 bp CCTTGCTCAGCCTCAGACATGTGCATGGTGCCAGGACTGAGACCTGCTTACCCCAGGGGAAGCCTGGCCTaGTCTGCCTCAGGGGCCGCC +
Preference number: 2 (lower is better)
Translates to: PCSASDMCMVPGLRPAYPRGSLA*SASGAA
Trigger: GGCGGCCCCTGAGGCAGACCAGGCCAGGCTTCCCCT...GGGGTAAGCAGGTCTCAGTCCTGGCACCATGCACATGTCTGAGGCTGAGCAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
3UTR-3UTR CCA 90 bp CAGAGGGAAGAACTGAGGCAAGAAGCCCCCGGTGATCCAGTCAGAGGATTGGGCTGGACGGGCGGTCCCTaGAGGCAGCTGGCCGAGTCC +
Preference number: 2 (lower is better)
Translates to: QREELRQEAPGDPVRGLGWTGGP*RQLAES
Trigger: GGACTCGGCCAGCTGCCTCCAGGGACCGCCCGTCCA...GCCCAATCCTCTGACTGGATCACCGGGGGCTTCTTGCCTCAGTTCTTCCCTCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
3UTR-3UTR CCA 90 bp CCTGTGGACCTGGTGGGCCTCTCATCCCCATTGGGCCCCGACTGCCGGCATCTCGTCCTCAGGGGTAGCTaGTGTTGGAGGTACTGGCTG +
Preference number: 2 (lower is better)
Translates to: PVDLVGLSSPLGPDCRHLVLRGS*CWRYWL
Trigger: CAGCCAGTACCTCCAACACCAGCTACCCCTGAGGAC...GAGATGCCGGCAGTCGGGGCCCAATGGGGATGAGAGGCCCACCAGGTCCACAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000435427.5
3UTR-3UTR GCA 90 bp CAGAGGGAAGAACTGAGGCAAGAAGCCCCCGGTGATCCAGTCAGAGGATTGGGCAAGCCTGGCCTGGTCTaGCTCAGGGGCCGCCACCAC +
Preference number: 2 (lower is better)
Translates to: QREELRQEAPGDPVRGLGKPGLV*LRGRHH
Trigger: GTGGTGGCGGCCCCTGAGGCAGACCAGGCCAGGCTT...GCCCAATCCTCTGACTGGATCACCGGGGGCTTCTTGCCTCAGTTCTTCCCTCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
3UTR-3UTR TCA 90 bp GAAGACTGCCCCCTGCCCTGTCATCTCTGCATGTGCCGAGCCCCAGCTCCTGACGCATGGTGCCAGGACTaGGACCTGCTTACCCCTAAG +
Preference number: 2 (lower is better)
Translates to: EDCPLPCHLCMCRAPAPDAWCQD*DLLTPK
Trigger: CTTAGGGGTAAGCAGGTCTCAGTCCTGGCACCATGC...GTCAGGAGCTGGGGCTCGGCACATGCAGAGATGACAGGGCAGGGGGCAGTCTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
3UTR-3UTR GCA 90 bp CCTGAGGACATTAATAAATATGGACGGGCGGTCCCTGGAGGCAGCTGGCCGAGTAAGCCTGGCCTGGTCTaGCTCAGGGGCCGCCACCAC +
Preference number: 2 (lower is better)
Translates to: PEDINKYGRAVPGGSWPSKPGLV*LRGRHH
Trigger: GTGGTGGCGGCCCCTGAGGCAGACCAGGCCAGGCTT...ACTCGGCCAGCTGCCTCCAGGGACCGCCCGTCCATATTTATTAATGTCCTCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
3UTR-3UTR GCA 90 bp CACACATCTACCTCCTGGCATCTGTCACAAGCATTTGCAGGAGTAGGCGGCCCCAAGCCTGGCCTGGTCTaGCTCAGGGGCCGCCACCAC +
Preference number: 2 (lower is better)
Translates to: HTSTSWHLSQAFAGVGGPKPGLV*LRGRHH
Trigger: GTGGTGGCGGCCCCTGAGGCAGACCAGGCCAGGCTT...GGGGCCGCCTACTCCTGCAAATGCTTGTGACAGATGCCAGGAGGTAGATGTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
3UTR-3UTR GCA 90 bp CGGTGGGCCCGGGAAGCCCCCAAGCACCGACTTGGTCCTGGAGGCCTCCATCTCGTTGGAGGTACTGGCTaGTCTATGACAGTCAGCATG +
Preference number: 2 (lower is better)
Translates to: RWAREAPKHRLGPGGLHLVGGTG*SMTVSM
Trigger: CATGCTGACTGTCATAGAGCAGCCAGTACCTCCAAC...GAGATGGAGGCCTCCAGGACCAAGTCGGTGCTTGGGGGCTTCCCGGGCCCACCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000435427.5
3UTR-3UTR CCA 90 bp CCTGTGGACCTGGTGGGCCTCTCATCCCCATTGGGCCCCGACTGCCGGCATCTCAGGGGTAGCTGGTGTTaGAGGTACTGGCTGCTCTAT +
Preference number: 2 (lower is better)
Translates to: PVDLVGLSSPLGPDCRHLRGSWC*RYWLLY
Trigger: ATAGAGCAGCCAGTACCTCCAACACCAGCTACCCCT...GAGATGCCGGCAGTCGGGGCCCAATGGGGATGAGAGGCCCACCAGGTCCACAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000435427.5
3UTR-3UTR CCA 90 bp CCTTTGGGCCTGGATGCTCAGACAGCAGATGAGACGAAGCCTTGTACCTCTATCAGGGGAAGCCTGGCCTaGTCTGCCTCAGGGGCCGCC +
Preference number: 2 (lower is better)
Translates to: PLGLDAQTADETKPCTSIRGSLA*SASGAA
Trigger: GGCGGCCCCTGAGGCAGACCAGGCCAGGCTTCCCCT...GATAGAGGTACAAGGCTTCGTCTCATCTGCTGTCTGAGCATCCAGGCCCAAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
3UTR-3UTR CCA 90 bp CCTTTGGGCCTGGATGCTCAGACAGCAGATGAGACGAAGCCTTGTACCTCTATCTGGACGGGCGGTCCCTaGAGGCAGCTGGCCGAGTCC +
Preference number: 2 (lower is better)
Translates to: PLGLDAQTADETKPCTSIWTGGP*RQLAES
Trigger: GGACTCGGCCAGCTGCCTCCAGGGACCGCCCGTCCA...GATAGAGGTACAAGGCTTCGTCTCATCTGCTGTCTGAGCATCCAGGCCCAAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
3UTR-3UTR GCA 90 bp CACACATCTACCTCCTGGCATCTGTCACAAGCATTTGCAGGAGTAGGCGGCCCCGAGGGGGAGGAAGACTaGCCCCTGCCCTGTCATCTC +
Preference number: 2 (lower is better)
Translates to: HTSTSWHLSQAFAGVGGPEGEED*PLPCHL
Trigger: GAGATGACAGGGCAGGGGGCAGTCTTCCTCCCCCTC...GGGGCCGCCTACTCCTGCAAATGCTTGTGACAGATGCCAGGAGGTAGATGTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
3UTR-3UTR TCA 90 bp GCACACATCTACCTCCTGGCATCTGTCACAAGCATTTGCAGGAGTAGGCGGCCCGCAAGAAGCCCCCGGTaGTCCAGTCAGAGGATTGGG +
Preference number: 2 (lower is better)
Translates to: AHIYLLASVTSICRSRRPARSPR*SSQRIG
Trigger: CCCAATCCTCTGACTGGATCACCGGGGGCTTCTTGC...GGGCCGCCTACTCCTGCAAATGCTTGTGACAGATGCCAGGAGGTAGATGTGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
3UTR-3UTR TCA 90 bp CACACATCTACCTCCTGGCATCTGTCACAAGCATTTGCAGGAGTAGGCGGCCCCCTCAGAGGGAAGAACTaGGGCAAGAAGCCCCCGGTG +
Preference number: 2 (lower is better)
Translates to: HTSTSWHLSQAFAGVGGPLRGKN*GKKPPV
Trigger: CACCGGGGGCTTCTTGCCTCAGTTCTTCCCTCTGAG...GGGGCCGCCTACTCCTGCAAATGCTTGTGACAGATGCCAGGAGGTAGATGTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
3UTR-3UTR TCA 90 bp GCACACATCTACCTCCTGGCATCTGTCACAAGCATTTGCAGGAGTAGGCGGCCCCTCAGAGGGAAGAACTaGGGCAAGAAGCCCCCGGTG +
Preference number: 2 (lower is better)
Translates to: AHIYLLASVTSICRSRRPLRGKN*GKKPPV
Trigger: CACCGGGGGCTTCTTGCCTCAGTTCTTCCCTCTGAG...GGGCCGCCTACTCCTGCAAATGCTTGTGACAGATGCCAGGAGGTAGATGTGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
3UTR-3UTR GCA 90 bp GCACACATCTACCTCCTGGCATCTGTCACAAGCATTTGCAGGAGTAGGCGGCCCCTGCCCTGTCATCTCTaGATGTGCCGAGCCCCAGCT +
Preference number: 2 (lower is better)
Translates to: AHIYLLASVTSICRSRRPLPCHL*MCRAPA
Trigger: AGCTGGGGCTCGGCACATGCAGAGATGACAGGGCAG...GGGCCGCCTACTCCTGCAAATGCTTGTGACAGATGCCAGGAGGTAGATGTGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
3UTR-3UTR GCA 90 bp ATCTACCTCCTGGCATCTGTCACAAGCATTTGCAGGAGTAGGCGGCCCCTTCCTGAGGGGGAGGAAGACTaGCCCCTGCCCTGTCATCTC +
Preference number: 2 (lower is better)
Translates to: IYLLASVTSICRSRRPLPEGEED*PLPCHL
Trigger: GAGATGACAGGGCAGGGGGCAGTCTTCCTCCCCCTC...AGGAAGGGGCCGCCTACTCCTGCAAATGCTTGTGACAGATGCCAGGAGGTAGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
3UTR-3UTR GCA 90 bp CACACATCTACCTCCTGGCATCTGTCACAAGCATTTGCAGGAGTAGGCGGCCCCTGTCATCTCTGCATGTaGCGAGCCCCAGCTCCTGAC +
Preference number: 2 (lower is better)
Translates to: HTSTSWHLSQAFAGVGGPCHLCM*RAPAPD
Trigger: GTCAGGAGCTGGGGCTCGGCACATGCAGAGATGACA...GGGGCCGCCTACTCCTGCAAATGCTTGTGACAGATGCCAGGAGGTAGATGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
3UTR-3UTR GCA 90 bp ACATCTACCTCCTGGCATCTGTCACAAGCATTTGCAGGAGTAGGCGGCCCCTTCCTGCCCTGTCATCTCTaGATGTGCCGAGCCCCAGCT +
Preference number: 2 (lower is better)
Translates to: TSTSWHLSQAFAGVGGPFLPCHL*MCRAPA
Trigger: AGCTGGGGCTCGGCACATGCAGAGATGACAGGGCAG...GAAGGGGCCGCCTACTCCTGCAAATGCTTGTGACAGATGCCAGGAGGTAGATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
3UTR-3UTR TCA 90 bp ATCTACCTCCTGGCATCTGTCACAAGCATTTGCAGGAGTAGGCGGCCCCTTCCTGCATGGTGCCAGGACTaGGACCTGCTTACCCCTAAG +
Preference number: 2 (lower is better)
Translates to: IYLLASVTSICRSRRPLPAWCQD*DLLTPK
Trigger: CTTAGGGGTAAGCAGGTCTCAGTCCTGGCACCATGC...AGGAAGGGGCCGCCTACTCCTGCAAATGCTTGTGACAGATGCCAGGAGGTAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
3UTR-3UTR TCA 90 bp GCACACATCTACCTCCTGGCATCTGTCACAAGCATTTGCAGGAGTAGGCGGCCCTTCACAGAGGGAAACTaGGGCCCAAGCCTCTCCTCT +
Preference number: 2 (lower is better)
Translates to: AHIYLLASVTSICRSRRPFTEGN*GPSLSS
Trigger: AGAGGAGAGGCTTGGGCCTCAGTTTCCCTCTGTGAA...GGGCCGCCTACTCCTGCAAATGCTTGTGACAGATGCCAGGAGGTAGATGTGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
3UTR-3UTR TCA 90 bp GCACACATCTACCTCCTGGCATCTGTCACAAGCATTTGCAGGAGTAGGCGGCCCTGCTCAGACAGCAGATaGGACGAAGCCTTGTACCTC +
Preference number: 2 (lower is better)
Translates to: AHIYLLASVTSICRSRRPCSDSR*DEALYL
Trigger: GAGGTACAAGGCTTCGTCTCATCTGCTGTCTGAGCA...GGGCCGCCTACTCCTGCAAATGCTTGTGACAGATGCCAGGAGGTAGATGTGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
3UTR-3UTR CCA 90 bp ATCTACCTCCTGGCATCTGTCACAAGCATTTGCAGGAGTAGGCGGCCCCTTCCTCAGTGCCTTTGGGCCTaGATGCTCAGACAGCAGATG +
Preference number: 2 (lower is better)
Translates to: IYLLASVTSICRSRRPLPQCLWA*MLRQQM
Trigger: CATCTGCTGTCTGAGCATCCAGGCCCAAAGGCACTG...AGGAAGGGGCCGCCTACTCCTGCAAATGCTTGTGACAGATGCCAGGAGGTAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
3UTR-3UTR TCA 90 bp ACATCTACCTCCTGGCATCTGTCACAAGCATTTGCAGGAGTAGGCGGCCCCTTCTGCTCAGACAGCAGATaGGACGAAGCCTTGTACCTC +
Preference number: 2 (lower is better)
Translates to: TSTSWHLSQAFAGVGGPFCSDSR*DEALYL
Trigger: GAGGTACAAGGCTTCGTCTCATCTGCTGTCTGAGCA...GAAGGGGCCGCCTACTCCTGCAAATGCTTGTGACAGATGCCAGGAGGTAGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
3UTR-3UTR GCA 90 bp ATCTACCTCCTGGCATCTGTCACAAGCATTTGCAGGAGTAGGCGGCCCCTTCCTTCAGCCTCAGACATGTaGATGGTGCCAGGACTGAGA +
Preference number: 2 (lower is better)
Translates to: IYLLASVTSICRSRRPLPSASDM*MVPGLR
Trigger: TCTCAGTCCTGGCACCATGCACATGTCTGAGGCTGA...AGGAAGGGGCCGCCTACTCCTGCAAATGCTTGTGACAGATGCCAGGAGGTAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
3UTR-3UTR CAA 90 bp GAAGACTGCCCCCTGCCCTGTCATCTCTGCATGTGCCGAGCCCCAGCTCCTGACCTCTCCTCTCAGCCCTaGCTCAGCCTCAGACATGTG +
Preference number: 3 (lower is better)
Translates to: EDCPLPCHLCMCRAPAPDLSSQP*LSLRHV
Trigger: CACATGTCTGAGGCTGAGCAAGGGCTGAGAGGAGAG...GTCAGGAGCTGGGGCTCGGCACATGCAGAGATGACAGGGCAGGGGGCAGTCTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
3UTR TCA 72 bp GGCTCAGAGGGAAGAACTGAGGCAAGAAGCCCCCGGTaGTCCAGTCAGAGGATTGGGCAGCCTGACCTCGGG +
Preference number: 3 (lower is better)
Translates to: GSEGRTEARSPR*SSQRIGQPDLG
Trigger: CCCGAGGTCAGGCTGCCCAATCCTCTGACTGGATCACCGGGGGCTTCTTGCCTCAGTTCTTCCCTCTGAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
3UTR TCA 72 bp AGATGCGGGAGGGCCTGGGGGCTCAGAGGGAAGAACTaGGGCAAGAAGCCCCCGGTGATCCAGTCAGAGGAT +
Preference number: 3 (lower is better)
Translates to: RCGRAWGLRGKN*GKKPPVIQSED
Trigger: ATCCTCTGACTGGATCACCGGGGGCTTCTTGCCTCAGTTCTTCCCTCTGAGCCCCCAGGCCCTCCCGCATCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
3UTR-3UTR CAA 90 bp CAGAGGGAAGAACTGAGGCAAGAAGCCCCCGGTGATCCAGTCAGAGGATTGGGCCTCTCCTCTCAGCCCTaGCTCAGCCTCAGACATGTG +
Preference number: 3 (lower is better)
Translates to: QREELRQEAPGDPVRGLGLSSQP*LSLRHV
Trigger: CACATGTCTGAGGCTGAGCAAGGGCTGAGAGGAGAG...GCCCAATCCTCTGACTGGATCACCGGGGGCTTCTTGCCTCAGTTCTTCCCTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
3UTR GCA 72 bp GCACACATCTACCTCCTGGCATCTGTCACAAGCATTTaGAGGAGTAGGCGGCCCCTTCCTCTCCATGTCCCC +
Preference number: 3 (lower is better)
Translates to: AHIYLLASVTSI*RSRRPLPLHVP
Trigger: GGGGACATGGAGAGGAAGGGGCCGCCTACTCCTGCAAATGCTTGTGACAGATGCCAGGAGGTAGATGTGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
3UTR CCA 72 bp GTAGGGGCCTTTATTGGCCAGCACACATCTACCTCCTaGCATCTGTCACAAGCATTTGCAGGAGTAGGCGGC +
Preference number: 3 (lower is better)
Translates to: VGAFIGQHTSTS*HLSQAFAGVGG
Trigger: GCCGCCTACTCCTGCAAATGCTTGTGACAGATGCCAGGAGGTAGATGTGTGCTGGCCAATAAAGGCCCCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR GCA 90 bp CCATTGGGCCCCGACTGCCGGCATCTCCCTTGGGGCCGGTGGGCCCGGGAAGCCACGGAGCTGCCCCGATaGTCCACGCAGCGCCGCCTC +
Preference number: 4 (lower is better)
Translates to: PLGPDCRHLPWGRWAREATELPR*STQRRL
Trigger: GAGGCGGCGCTGCGTGGAGCATCGGGGCAGCTCCGT...GGCTTCCCGGGCCCACCGGCCCCAAGGGAGATGCCGGCAGTCGGGGCCCAATGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000435427.5
CDS-3UTR GCA 90 bp CCATTGGGCCCCGACTGCCGGCATCTCCCTTGGGGCCGGTGGGCCCGGGAAGCCCCATTGGGCCCCGACTaGCGGCATCTCCCTTGGGGC +
Preference number: 4 (lower is better)
Translates to: PLGPDCRHLPWGRWAREAPLGPD*RHLPWG
Trigger: GCCCCAAGGGAGATGCCGGCAGTCGGGGCCCAATGG...GGCTTCCCGGGCCCACCGGCCCCAAGGGAGATGCCGGCAGTCGGGGCCCAATGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000435427.5
CDS-3UTR GCA 90 bp GGTGGGCCCGGGAAGCCCCCAAGCACCGACTTGGTCCTGGAGGCCTCCATCTCCCTCCATCTCCGGGGCTaGCCTGGGCAGGAGGGGGAC +
Preference number: 4 (lower is better)
Translates to: GGPGKPPSTDLVLEASISLHLRG*PGQEGD
Trigger: GTCCCCCTCCTGCCCAGGGCAGCCCCGGAGATGGAG...GGAGATGGAGGCCTCCAGGACCAAGTCGGTGCTTGGGGGCTTCCCGGGCCCACC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000435427.5
CDS-3UTR CCA 90 bp CCTGTGGACCTGGTGGGCCTCTCATCCCCATTGGGCCCCGACTGCCGGCATCTCCTCCCTTGGGGCCGGTaGGCCCGGGAAGCCCCCAAG +
Preference number: 4 (lower is better)
Translates to: PVDLVGLSSPLGPDCRHLLPWGR*AREAPK
Trigger: CTTGGGGGCTTCCCGGGCCCACCGGCCCCAAGGGAG...GAGATGCCGGCAGTCGGGGCCCAATGGGGATGAGAGGCCCACCAGGTCCACAGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000435427.5
CDS-3UTR CCA 90 bp GACCTGGTGGGCCTCTCATCCCCATTGGGCCCCGACTGCCGGCATCTCCCTTGGTGCCGGCATCTCCCTTaGGGCCGGTGGGCCCGGGAA +
Preference number: 4 (lower is better)
Translates to: DLVGLSSPLGPDCRHLPWCRHLP*GRWARE
Trigger: TTCCCGGGCCCACCGGCCCCAAGGGAGATGCCGGCA...CCAAGGGAGATGCCGGCAGTCGGGGCCCAATGGGGATGAGAGGCCCACCAGGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435427.5
CDS-3UTR CCA 90 bp GAAGACTGCCCCCTGCCCTGTCATCTCTGCATGTGCCGAGCCCCAGCTCCTGACCTCCCTTGGGGCCGGTaGGCCCGGGAAGCCCCCAAG +
Preference number: 4 (lower is better)
Translates to: EDCPLPCHLCMCRAPAPDLPWGR*AREAPK
Trigger: CTTGGGGGCTTCCCGGGCCCACCGGCCCCAAGGGAG...GTCAGGAGCTGGGGCTCGGCACATGCAGAGATGACAGGGCAGGGGGCAGTCTTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR CCA 90 bp GGTGGGCCCGGGAAGCCCCCAAGCACCGACTTGGTCCTGGAGGCCTCCATCTCCGCCTCTCATCCCCATTaGGCCCCGACTGCCGGCATC +
Preference number: 4 (lower is better)
Translates to: GGPGKPPSTDLVLEASISASHPH*APTAGI
Trigger: GATGCCGGCAGTCGGGGCCCAATGGGGATGAGAGGC...GGAGATGGAGGCCTCCAGGACCAAGTCGGTGCTTGGGGGCTTCCCGGGCCCACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000435427.5
CDS-3UTR CCA 90 bp GACCTGGTGGGCCTCTCATCCCCATTGGGCCCCGACTGCCGGCATCTCCCTTGGGCACCGACTTGGTCCTaGAGGCCTCCATCTCCGGGG +
Preference number: 4 (lower is better)
Translates to: DLVGLSSPLGPDCRHLPWAPTWS*RPPSPG
Trigger: CCCCGGAGATGGAGGCCTCCAGGACCAAGTCGGTGC...CCAAGGGAGATGCCGGCAGTCGGGGCCCAATGGGGATGAGAGGCCCACCAGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435427.5
CDS-3UTR CCA 90 bp GAAGACTGCCCCCTGCCCTGTCATCTCTGCATGTGCCGAGCCCCAGCTCCTGACGGGACCCATGGGCCCTaGAGGGCCTGGAGGCCCAGT +
Preference number: 4 (lower is better)
Translates to: EDCPLPCHLCMCRAPAPDGTHGP*RAWRPS
Trigger: ACTGGGCCTCCAGGCCCTCCAGGGCCCATGGGTCCC...GTCAGGAGCTGGGGCTCGGCACATGCAGAGATGACAGGGCAGGGGGCAGTCTTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR CCA 90 bp GAAGACTGCCCCCTGCCCTGTCATCTCTGCATGTGCCGAGCCCCAGCTCCTGACAGGGGAAGCCTGGCCTaGTCTGCCTCAGGGGCCGCC +
Preference number: 4 (lower is better)
Translates to: EDCPLPCHLCMCRAPAPDRGSLA*SASGAA
Trigger: GGCGGCCCCTGAGGCAGACCAGGCCAGGCTTCCCCT...GTCAGGAGCTGGGGCTCGGCACATGCAGAGATGACAGGGCAGGGGGCAGTCTTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR GCA 90 bp GAAGACTGCCCCCTGCCCTGTCATCTCTGCATGTGCCGAGCCCCAGCTCCTGACTCCGGAGAACGGAGCTaGCCCGATGCTCCACGCAGC +
Preference number: 4 (lower is better)
Translates to: EDCPLPCHLCMCRAPAPDSGERS*PDAPRS
Trigger: GCTGCGTGGAGCATCGGGGCAGCTCCGTTCTCCGGA...GTCAGGAGCTGGGGCTCGGCACATGCAGAGATGACAGGGCAGGGGGCAGTCTTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR CCA 90 bp GGTGGGCCCGGGAAGCCCCCAAGCACCGACTTGGTCCTGGAGGCCTCCATCTCCGTCCTCAGGGGTAGCTaGTGTTGGAGGTACTGGCTG +
Preference number: 4 (lower is better)
Translates to: GGPGKPPSTDLVLEASISVLRGS*CWRYWL
Trigger: CAGCCAGTACCTCCAACACCAGCTACCCCTGAGGAC...GGAGATGGAGGCCTCCAGGACCAAGTCGGTGCTTGGGGGCTTCCCGGGCCCACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435427.5
CDS-3UTR CCA 90 bp GACCTGGTGGGCCTCTCATCCCCATTGGGCCCCGACTGCCGGCATCTCCCTTGGCCCCAAGCACCGACTTaGTCCTGGAGGCCTCCATCT +
Preference number: 4 (lower is better)
Translates to: DLVGLSSPLGPDCRHLPWPQAPT*SWRPPS
Trigger: AGATGGAGGCCTCCAGGACCAAGTCGGTGCTTGGGG...CCAAGGGAGATGCCGGCAGTCGGGGCCCAATGGGGATGAGAGGCCCACCAGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000435427.5
CDS-3UTR CCA 90 bp CAGAGGGAAGAACTGAGGCAAGAAGCCCCCGGTGATCCAGTCAGAGGATTGGGCCTCCCTTGGGGCCGGTaGGCCCGGGAAGCCCCCAAG +
Preference number: 4 (lower is better)
Translates to: QREELRQEAPGDPVRGLGLPWGR*AREAPK
Trigger: CTTGGGGGCTTCCCGGGCCCACCGGCCCCAAGGGAG...GCCCAATCCTCTGACTGGATCACCGGGGGCTTCTTGCCTCAGTTCTTCCCTCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR CCA 90 bp GAAGACTGCCCCCTGCCCTGTCATCTCTGCATGTGCCGAGCCCCAGCTCCTGACGCCTCTCATCCCCATTaGGCCCCGACTGCCGGCATC +
Preference number: 4 (lower is better)
Translates to: EDCPLPCHLCMCRAPAPDASHPH*APTAGI
Trigger: GATGCCGGCAGTCGGGGCCCAATGGGGATGAGAGGC...GTCAGGAGCTGGGGCTCGGCACATGCAGAGATGACAGGGCAGGGGGCAGTCTTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR GCA 90 bp CCTTGCTCAGCCTCAGACATGTGCATGGTGCCAGGACTGAGACCTGCTTACCCCCTCCATCTCCGGGGCTaGCCTGGGCAGGAGGGGGAC +
Preference number: 4 (lower is better)
Translates to: PCSASDMCMVPGLRPAYPLHLRG*PGQEGD
Trigger: GTCCCCCTCCTGCCCAGGGCAGCCCCGGAGATGGAG...GGGGTAAGCAGGTCTCAGTCCTGGCACCATGCACATGTCTGAGGCTGAGCAAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR GCA 90 bp GAAGACTGCCCCCTGCCCTGTCATCTCTGCATGTGCCGAGCCCCAGCTCCTGACGAGGGGGAGGAAGACTaGCCCCTGCCCTGTCATCTC +
Preference number: 4 (lower is better)
Translates to: EDCPLPCHLCMCRAPAPDEGEED*PLPCHL
Trigger: GAGATGACAGGGCAGGGGGCAGTCTTCCTCCCCCTC...GTCAGGAGCTGGGGCTCGGCACATGCAGAGATGACAGGGCAGGGGGCAGTCTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR CCA 90 bp CCTTGCTCAGCCTCAGACATGTGCATGGTGCCAGGACTGAGACCTGCTTACCCCTGCCGGCATCTCCCTTaGGGCCGGTGGGCCCGGGAA +
Preference number: 4 (lower is better)
Translates to: PCSASDMCMVPGLRPAYPCRHLP*GRWARE
Trigger: TTCCCGGGCCCACCGGCCCCAAGGGAGATGCCGGCA...GGGGTAAGCAGGTCTCAGTCCTGGCACCATGCACATGTCTGAGGCTGAGCAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR CCA 90 bp CCTTGCTCAGCCTCAGACATGTGCATGGTGCCAGGACTGAGACCTGCTTACCCCGGGACCCATGGGCCCTaGAGGGCCTGGAGGCCCAGT +
Preference number: 4 (lower is better)
Translates to: PCSASDMCMVPGLRPAYPGTHGP*RAWRPS
Trigger: ACTGGGCCTCCAGGCCCTCCAGGGCCCATGGGTCCC...GGGGTAAGCAGGTCTCAGTCCTGGCACCATGCACATGTCTGAGGCTGAGCAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR GCA 90 bp CACACATCTACCTCCTGGCATCTGTCACAAGCATTTGCAGGAGTAGGCGGCCCCACGGAGCTGCCCCGATaGTCCACGCAGCGCCGCCTC +
Preference number: 4 (lower is better)
Translates to: HTSTSWHLSQAFAGVGGPTELPR*STQRRL
Trigger: GAGGCGGCGCTGCGTGGAGCATCGGGGCAGCTCCGT...GGGGCCGCCTACTCCTGCAAATGCTTGTGACAGATGCCAGGAGGTAGATGTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR GCA 90 bp GGCAGAAGGGACCCTGAGGACATTAATAAATATGGACGGGCGGTCCCTGGAGGCCTCCATCTCCGGGGCTaGCCTGGGCAGGAGGGGGAC +
Preference number: 4 (lower is better)
Translates to: GRRDPEDINKYGRAVPGGLHLRG*PGQEGD
Trigger: GTCCCCCTCCTGCCCAGGGCAGCCCCGGAGATGGAG...GCCTCCAGGGACCGCCCGTCCATATTTATTAATGTCCTCAGGGTCCCTTCTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR GCA 90 bp CCTTGCTCAGCCTCAGACATGTGCATGGTGCCAGGACTGAGACCTGCTTACCCCCCATTGGGCCCCGACTaGCGGCATCTCCCTTGGGGC +
Preference number: 4 (lower is better)
Translates to: PCSASDMCMVPGLRPAYPPLGPD*RHLPWG
Trigger: GCCCCAAGGGAGATGCCGGCAGTCGGGGCCCAATGG...GGGGTAAGCAGGTCTCAGTCCTGGCACCATGCACATGTCTGAGGCTGAGCAAGG
63% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR GCA 90 bp CAGAGGGAAGAACTGAGGCAAGAAGCCCCCGGTGATCCAGTCAGAGGATTGGGCCCATTGGGCCCCGACTaGCGGCATCTCCCTTGGGGC +
Preference number: 4 (lower is better)
Translates to: QREELRQEAPGDPVRGLGPLGPD*RHLPWG
Trigger: GCCCCAAGGGAGATGCCGGCAGTCGGGGCCCAATGG...GCCCAATCCTCTGACTGGATCACCGGGGGCTTCTTGCCTCAGTTCTTCCCTCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR GCA 90 bp CAGAGGGAAGAACTGAGGCAAGAAGCCCCCGGTGATCCAGTCAGAGGATTGGGCCATGTCCGCCCCTCTTaGCCCGAAGGAGGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: QREELRQEAPGDPVRGLGHVRPS*PEGGWG
Trigger: CCCCCAGCCTCCTTCGGGGCAAGAGGGGCGGACATG...GCCCAATCCTCTGACTGGATCACCGGGGGCTTCTTGCCTCAGTTCTTCCCTCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR GCA 90 bp GAAGACTGCCCCCTGCCCTGTCATCTCTGCATGTGCCGAGCCCCAGCTCCTGACCTGCCCTGTCATCTCTaGATGTGCCGAGCCCCAGCT +
Preference number: 4 (lower is better)
Translates to: EDCPLPCHLCMCRAPAPDLPCHL*MCRAPA
Trigger: AGCTGGGGCTCGGCACATGCAGAGATGACAGGGCAG...GTCAGGAGCTGGGGCTCGGCACATGCAGAGATGACAGGGCAGGGGGCAGTCTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR CCA 90 bp GGTGGGCCCGGGAAGCCCCCAAGCACCGACTTGGTCCTGGAGGCCTCCATCTCCAGGGGTAGCTGGTGTTaGAGGTACTGGCTGCTCTAT +
Preference number: 4 (lower is better)
Translates to: GGPGKPPSTDLVLEASISRGSWC*RYWLLY
Trigger: ATAGAGCAGCCAGTACCTCCAACACCAGCTACCCCT...GGAGATGGAGGCCTCCAGGACCAAGTCGGTGCTTGGGGGCTTCCCGGGCCCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000435427.5
CDS-3UTR CCA 90 bp GCACACATCTACCTCCTGGCATCTGTCACAAGCATTTGCAGGAGTAGGCGGCCCTGCCGGCATCTCCCTTaGGGCCGGTGGGCCCGGGAA +
Preference number: 4 (lower is better)
Translates to: AHIYLLASVTSICRSRRPCRHLP*GRWARE
Trigger: TTCCCGGGCCCACCGGCCCCAAGGGAGATGCCGGCA...GGGCCGCCTACTCCTGCAAATGCTTGTGACAGATGCCAGGAGGTAGATGTGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR CCA 90 bp CCTGAGGACATTAATAAATATGGACGGGCGGTCCCTGGAGGCAGCTGGCCGAGTGGGACCCATGGGCCCTaGAGGGCCTGGAGGCCCAGT +
Preference number: 4 (lower is better)
Translates to: PEDINKYGRAVPGGSWPSGTHGP*RAWRPS
Trigger: ACTGGGCCTCCAGGCCCTCCAGGGCCCATGGGTCCC...ACTCGGCCAGCTGCCTCCAGGGACCGCCCGTCCATATTTATTAATGTCCTCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR CCA 90 bp CACACATCTACCTCCTGGCATCTGTCACAAGCATTTGCAGGAGTAGGCGGCCCCAGGGGAAGCCTGGCCTaGTCTGCCTCAGGGGCCGCC +
Preference number: 4 (lower is better)
Translates to: HTSTSWHLSQAFAGVGGPRGSLA*SASGAA
Trigger: GGCGGCCCCTGAGGCAGACCAGGCCAGGCTTCCCCT...GGGGCCGCCTACTCCTGCAAATGCTTGTGACAGATGCCAGGAGGTAGATGTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR CCA 90 bp GGCAGAAGGGACCCTGAGGACATTAATAAATATGGACGGGCGGTCCCTGGAGGCTGGACGGGCGGTCCCTaGAGGCAGCTGGCCGAGTCC +
Preference number: 4 (lower is better)
Translates to: GRRDPEDINKYGRAVPGGWTGGP*RQLAES
Trigger: GGACTCGGCCAGCTGCCTCCAGGGACCGCCCGTCCA...GCCTCCAGGGACCGCCCGTCCATATTTATTAATGTCCTCAGGGTCCCTTCTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR TCA 90 bp GAAGACTGCCCCCTGCCCTGTCATCTCTGCATGTGCCGAGCCCCAGCTCCTGACGCAGTTGAGACAACCTaGGAAGGCTGTGGGCCGAAG +
Preference number: 4 (lower is better)
Translates to: EDCPLPCHLCMCRAPAPDAVETT*EGCGPK
Trigger: CTTCGGCCCACAGCCTTCTCAGGTTGTCTCAACTGC...GTCAGGAGCTGGGGCTCGGCACATGCAGAGATGACAGGGCAGGGGGCAGTCTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR GCA 90 bp ACATCTACCTCCTGGCATCTGTCACAAGCATTTGCAGGAGTAGGCGGCCCCTTCACGGAGCTGCCCCGATaGTCCACGCAGCGCCGCCTC +
Preference number: 4 (lower is better)
Translates to: TSTSWHLSQAFAGVGGPFTELPR*STQRRL
Trigger: GAGGCGGCGCTGCGTGGAGCATCGGGGCAGCTCCGT...GAAGGGGCCGCCTACTCCTGCAAATGCTTGTGACAGATGCCAGGAGGTAGATGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR GCA 90 bp ATCTACCTCCTGGCATCTGTCACAAGCATTTGCAGGAGTAGGCGGCCCCTTCCTACGGAGCTGCCCCGATaGTCCACGCAGCGCCGCCTC +
Preference number: 4 (lower is better)
Translates to: IYLLASVTSICRSRRPLPTELPR*STQRRL
Trigger: GAGGCGGCGCTGCGTGGAGCATCGGGGCAGCTCCGT...AGGAAGGGGCCGCCTACTCCTGCAAATGCTTGTGACAGATGCCAGGAGGTAGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR GCA 90 bp ACATCTACCTCCTGGCATCTGTCACAAGCATTTGCAGGAGTAGGCGGCCCCTTCCTCCATCTCCGGGGCTaGCCTGGGCAGGAGGGGGAC +
Preference number: 4 (lower is better)
Translates to: TSTSWHLSQAFAGVGGPFLHLRG*PGQEGD
Trigger: GTCCCCCTCCTGCCCAGGGCAGCCCCGGAGATGGAG...GAAGGGGCCGCCTACTCCTGCAAATGCTTGTGACAGATGCCAGGAGGTAGATGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR GCA 90 bp CCTGAGGACATTAATAAATATGGACGGGCGGTCCCTGGAGGCAGCTGGCCGAGTCATGTCCGCCCCTCTTaGCCCGAAGGAGGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: PEDINKYGRAVPGGSWPSHVRPS*PEGGWG
Trigger: CCCCCAGCCTCCTTCGGGGCAAGAGGGGCGGACATG...ACTCGGCCAGCTGCCTCCAGGGACCGCCCGTCCATATTTATTAATGTCCTCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR GCA 90 bp GCACACATCTACCTCCTGGCATCTGTCACAAGCATTTGCAGGAGTAGGCGGCCCAAGCCTGGCCTGGTCTaGCTCAGGGGCCGCCACCAC +
Preference number: 4 (lower is better)
Translates to: AHIYLLASVTSICRSRRPKPGLV*LRGRHH
Trigger: GTGGTGGCGGCCCCTGAGGCAGACCAGGCCAGGCTT...GGGCCGCCTACTCCTGCAAATGCTTGTGACAGATGCCAGGAGGTAGATGTGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR CCA 90 bp CGGTGGGCCCGGGAAGCCCCCAAGCACCGACTTGGTCCTGGAGGCCTCCATCTCTGGTGTTGGAGGTACTaGCTGCTCTATGACAGTCAG +
Preference number: 4 (lower is better)
Translates to: RWAREAPKHRLGPGGLHLWCWRY*LLYDSQ
Trigger: CTGACTGTCATAGAGCAGCCAGTACCTCCAACACCA...GAGATGGAGGCCTCCAGGACCAAGTCGGTGCTTGGGGGCTTCCCGGGCCCACCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000435427.5
CDS-3UTR CCA 90 bp CCTTTGGGCCTGGATGCTCAGACAGCAGATGAGACGAAGCCTTGTACCTCTATCCTCCCTTGGGGCCGGTaGGCCCGGGAAGCCCCCAAG +
Preference number: 4 (lower is better)
Translates to: PLGLDAQTADETKPCTSILPWGR*AREAPK
Trigger: CTTGGGGGCTTCCCGGGCCCACCGGCCCCAAGGGAG...GATAGAGGTACAAGGCTTCGTCTCATCTGCTGTCTGAGCATCCAGGCCCAAAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR CCA 90 bp ACATCTACCTCCTGGCATCTGTCACAAGCATTTGCAGGAGTAGGCGGCCCCTTCAGGGGAAGCCTGGCCTaGTCTGCCTCAGGGGCCGCC +
Preference number: 4 (lower is better)
Translates to: TSTSWHLSQAFAGVGGPFRGSLA*SASGAA
Trigger: GGCGGCCCCTGAGGCAGACCAGGCCAGGCTTCCCCT...GAAGGGGCCGCCTACTCCTGCAAATGCTTGTGACAGATGCCAGGAGGTAGATGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR CCA 90 bp TTGCTCAGCCTCAGACATGTGCATGGTGCCAGGACTGAGACCTGCTTACCCCTATGGACGGGCGGTCCCTaGAGGCAGCTGGCCGAGTCC +
Preference number: 4 (lower is better)
Translates to: LLSLRHVHGARTETCLPLWTGGP*RQLAES
Trigger: GGACTCGGCCAGCTGCCTCCAGGGACCGCCCGTCCA...TAGGGGTAAGCAGGTCTCAGTCCTGGCACCATGCACATGTCTGAGGCTGAGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR CCA 90 bp GAAGACTGCCCCCTGCCCTGTCATCTCTGCATGTGCCGAGCCCCAGCTCCTGACCCCCAGCTCTGGTTCTaGCCAGATGATGGCTTCCAG +
Preference number: 4 (lower is better)
Translates to: EDCPLPCHLCMCRAPAPDPQLWF*PDDGFQ
Trigger: CTGGAAGCCATCATCTGGCCAGAACCAGAGCTGGGG...GTCAGGAGCTGGGGCTCGGCACATGCAGAGATGACAGGGCAGGGGGCAGTCTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000404820.7
CDS-3UTR TCA 90 bp CCTGAGGACATTAATAAATATGGACGGGCGGTCCCTGGAGGCAGCTGGCCGAGTCTCGCAGCTCACTCCTaGGTGCCCAGGGCAGCACCT +
Preference number: 4 (lower is better)
Translates to: PEDINKYGRAVPGGSWPSLAAHS*VPRAAP
Trigger: AGGTGCTGCCCTGGGCACTCAGGAGTGAGCTGCGAG...ACTCGGCCAGCTGCCTCCAGGGACCGCCCGTCCATATTTATTAATGTCCTCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR TCA 90 bp CACACATCTACCTCCTGGCATCTGTCACAAGCATTTGCAGGAGTAGGCGGCCCCCTCGCAGCTCACTCCTaGGTGCCCAGGGCAGCACCT +
Preference number: 4 (lower is better)
Translates to: HTSTSWHLSQAFAGVGGPLAAHS*VPRAAP
Trigger: AGGTGCTGCCCTGGGCACTCAGGAGTGAGCTGCGAG...GGGGCCGCCTACTCCTGCAAATGCTTGTGACAGATGCCAGGAGGTAGATGTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR TCA 90 bp GAAGACTGCCCCCTGCCCTGTCATCTCTGCATGTGCCGAGCCCCAGCTCCTGACCCGCTCTGTCAGCTCTaGCACTTTGCTGCAGTTGAG +
Preference number: 4 (lower is better)
Translates to: EDCPLPCHLCMCRAPAPDPLCQL*HFAAVE
Trigger: CTCAACTGCAGCAAAGTGTCAGAGCTGACAGAGCGG...GTCAGGAGCTGGGGCTCGGCACATGCAGAGATGACAGGGCAGGGGGCAGTCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR GCA 90 bp CAGAGGGAAGAACTGAGGCAAGAAGCCCCCGGTGATCCAGTCAGAGGATTGGGCTCCGCCGCATGGTACTaGCCGACCACATGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: QREELRQEAPGDPVRGLGSAAWY*PTTWAP
Trigger: TGGAGCCCATGTGGTCGGGCAGTACCATGCGGCGGA...GCCCAATCCTCTGACTGGATCACCGGGGGCTTCTTGCCTCAGTTCTTCCCTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR GCA 90 bp CCTGTGGACCTGGTGGGCCTCTCATCCCCATTGGGCCCCGACTGCCGGCATCTCGTTGGAGGTACTGGCTaGTCTATGACAGTCAGCATG +
Preference number: 4 (lower is better)
Translates to: PVDLVGLSSPLGPDCRHLVGGTG*SMTVSM
Trigger: CATGCTGACTGTCATAGAGCAGCCAGTACCTCCAAC...GAGATGCCGGCAGTCGGGGCCCAATGGGGATGAGAGGCCCACCAGGTCCACAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435427.5
CDS-3UTR GCA 90 bp TTGCTCAGCCTCAGACATGTGCATGGTGCCAGGACTGAGACCTGCTTACCCCTACCATTGGGCCCCGACTaGCGGCATCTCCCTTGGGGC +
Preference number: 4 (lower is better)
Translates to: LLSLRHVHGARTETCLPLPLGPD*RHLPWG
Trigger: GCCCCAAGGGAGATGCCGGCAGTCGGGGCCCAATGG...TAGGGGTAAGCAGGTCTCAGTCCTGGCACCATGCACATGTCTGAGGCTGAGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR GCA 90 bp TTGCTCAGCCTCAGACATGTGCATGGTGCCAGGACTGAGACCTGCTTACCCCTACATGTCCGCCCCTCTTaGCCCGAAGGAGGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: LLSLRHVHGARTETCLPLHVRPS*PEGGWG
Trigger: CCCCCAGCCTCCTTCGGGGCAAGAGGGGCGGACATG...TAGGGGTAAGCAGGTCTCAGTCCTGGCACCATGCACATGTCTGAGGCTGAGCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR CCA 90 bp CACACATCTACCTCCTGGCATCTGTCACAAGCATTTGCAGGAGTAGGCGGCCCCGCGCCATCCGCCGCATaGTACTGCCCGACCACATGG +
Preference number: 4 (lower is better)
Translates to: HTSTSWHLSQAFAGVGGPAPSAA*YCPTTW
Trigger: CCATGTGGTCGGGCAGTACCATGCGGCGGATGGCGC...GGGGCCGCCTACTCCTGCAAATGCTTGTGACAGATGCCAGGAGGTAGATGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR CCA 90 bp GCACACATCTACCTCCTGGCATCTGTCACAAGCATTTGCAGGAGTAGGCGGCCCGCACCGACTTGGTCCTaGAGGCCTCCATCTCCGGGG +
Preference number: 4 (lower is better)
Translates to: AHIYLLASVTSICRSRRPAPTWS*RPPSPG
Trigger: CCCCGGAGATGGAGGCCTCCAGGACCAAGTCGGTGC...GGGCCGCCTACTCCTGCAAATGCTTGTGACAGATGCCAGGAGGTAGATGTGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR CCA 90 bp CCTGAGGACATTAATAAATATGGACGGGCGGTCCCTGGAGGCAGCTGGCCGAGTGCCTCTCATCCCCATTaGGCCCCGACTGCCGGCATC +
Preference number: 4 (lower is better)
Translates to: PEDINKYGRAVPGGSWPSASHPH*APTAGI
Trigger: GATGCCGGCAGTCGGGGCCCAATGGGGATGAGAGGC...ACTCGGCCAGCTGCCTCCAGGGACCGCCCGTCCATATTTATTAATGTCCTCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR CCA 90 bp CCTGAGGACATTAATAAATATGGACGGGCGGTCCCTGGAGGCAGCTGGCCGAGTTGGGAGATCCGGGCATaGGGTGGCCCAACAGGGGCT +
Preference number: 4 (lower is better)
Translates to: PEDINKYGRAVPGGSWPSWEIRA*GGPTGA
Trigger: AGCCCCTGTTGGGCCACCCCATGCCCGGATCTCCCA...ACTCGGCCAGCTGCCTCCAGGGACCGCCCGTCCATATTTATTAATGTCCTCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR CCA 90 bp CACACATCTACCTCCTGGCATCTGTCACAAGCATTTGCAGGAGTAGGCGGCCCCTGGGAGATCCGGGCATaGGGTGGCCCAACAGGGGCT +
Preference number: 4 (lower is better)
Translates to: HTSTSWHLSQAFAGVGGPWEIRA*GGPTGA
Trigger: AGCCCCTGTTGGGCCACCCCATGCCCGGATCTCCCA...GGGGCCGCCTACTCCTGCAAATGCTTGTGACAGATGCCAGGAGGTAGATGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR CCA 90 bp CCTGAGGACATTAATAAATATGGACGGGCGGTCCCTGGAGGCAGCTGGCCGAGTTCTCGTCCCGGCTCCTaGGGGCCACGATCCGGTAGT +
Preference number: 4 (lower is better)
Translates to: PEDINKYGRAVPGGSWPSSRPGS*GPRSGS
Trigger: ACTACCGGATCGTGGCCCCCAGGAGCCGGGACGAGA...ACTCGGCCAGCTGCCTCCAGGGACCGCCCGTCCATATTTATTAATGTCCTCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR CCA 90 bp CACACATCTACCTCCTGGCATCTGTCACAAGCATTTGCAGGAGTAGGCGGCCCCTCTCGTCCCGGCTCCTaGGGGCCACGATCCGGTAGT +
Preference number: 4 (lower is better)
Translates to: HTSTSWHLSQAFAGVGGPSRPGS*GPRSGS
Trigger: ACTACCGGATCGTGGCCCCCAGGAGCCGGGACGAGA...GGGGCCGCCTACTCCTGCAAATGCTTGTGACAGATGCCAGGAGGTAGATGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR TCA 90 bp GGCAGAAGGGACCCTGAGGACATTAATAAATATGGACGGGCGGTCCCTGGAGGCCCTGGGGGTCCTATGTaGCCAGGACTCCCAGGGACA +
Preference number: 4 (lower is better)
Translates to: GRRDPEDINKYGRAVPGGPGGPM*PGLPGT
Trigger: TGTCCCTGGGAGTCCTGGTCACATAGGACCCCCAGG...GCCTCCAGGGACCGCCCGTCCATATTTATTAATGTCCTCAGGGTCCCTTCTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334018.11
ENST00000404820.7
CDS-3UTR TCA 90 bp ACATCTACCTCCTGGCATCTGTCACAAGCATTTGCAGGAGTAGGCGGCCCCTTCTGGCTTCCAGGAGGGTaGCCCGTCTGGCCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: TSTSWHLSQAFAGVGGPFWLPGG*PVWPGA
Trigger: AGCTCCTGGCCAGACGGGTCACCCTCCTGGAAGCCA...GAAGGGGCCGCCTACTCCTGCAAATGCTTGTGACAGATGCCAGGAGGTAGATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404820.7
CDS-3UTR GCA 90 bp CCTTTGGGCCTGGATGCTCAGACAGCAGATGAGACGAAGCCTTGTACCTCTATCAAGCCTGGCCTGGTCTaGCTCAGGGGCCGCCACCAC +
Preference number: 4 (lower is better)
Translates to: PLGLDAQTADETKPCTSIKPGLV*LRGRHH
Trigger: GTGGTGGCGGCCCCTGAGGCAGACCAGGCCAGGCTT...GATAGAGGTACAAGGCTTCGTCTCATCTGCTGTCTGAGCATCCAGGCCCAAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR GCA 90 bp GAAGACTGCCCCCTGCCCTGTCATCTCTGCATGTGCCGAGCCCCAGCTCCTGACTCTGTCACAAGCATTTaGAGGAGTAGGCGGCCCCTT +
Preference number: 4 (lower is better)
Translates to: EDCPLPCHLCMCRAPAPDSVTSI*RSRRPL
Trigger: AAGGGGCCGCCTACTCCTGCAAATGCTTGTGACAGA...GTCAGGAGCTGGGGCTCGGCACATGCAGAGATGACAGGGCAGGGGGCAGTCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR CCA 90 bp CCTTGCTCAGCCTCAGACATGTGCATGGTGCCAGGACTGAGACCTGCTTACCCCTACTGCCCGACCACATaGGCTCCAAGGAGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: PCSASDMCMVPGLRPAYPYCPTT*APRRQR
Trigger: CCTCTGCCTCCTTGGAGCCCATGTGGTCGGGCAGTA...GGGGTAAGCAGGTCTCAGTCCTGGCACCATGCACATGTCTGAGGCTGAGCAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR CCA 90 bp TTGCTCAGCCTCAGACATGTGCATGGTGCCAGGACTGAGACCTGCTTACCCCTAGCGCCATCCGCCGCATaGTACTGCCCGACCACATGG +
Preference number: 4 (lower is better)
Translates to: LLSLRHVHGARTETCLPLAPSAA*YCPTTW
Trigger: CCATGTGGTCGGGCAGTACCATGCGGCGGATGGCGC...TAGGGGTAAGCAGGTCTCAGTCCTGGCACCATGCACATGTCTGAGGCTGAGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR CCA 90 bp AGGGACCCTGAGGACATTAATAAATATGGACGGGCGGTCCCTGGAGGCAGCTGGAACCTGAGAAGGCTGTaGGCCGAAGCGCCATCCGCC +
Preference number: 4 (lower is better)
Translates to: RDPEDINKYGRAVPGGSWNLRRL*AEAPSA
Trigger: GGCGGATGGCGCTTCGGCCCACAGCCTTCTCAGGTT...CCAGCTGCCTCCAGGGACCGCCCGTCCATATTTATTAATGTCCTCAGGGTCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR CCA 90 bp GCACACATCTACCTCCTGGCATCTGTCACAAGCATTTGCAGGAGTAGGCGGCCCAACCTGAGAAGGCTGTaGGCCGAAGCGCCATCCGCC +
Preference number: 4 (lower is better)
Translates to: AHIYLLASVTSICRSRRPNLRRL*AEAPSA
Trigger: GGCGGATGGCGCTTCGGCCCACAGCCTTCTCAGGTT...GGGCCGCCTACTCCTGCAAATGCTTGTGACAGATGCCAGGAGGTAGATGTGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR CCA 90 bp ATCTACCTCCTGGCATCTGTCACAAGCATTTGCAGGAGTAGGCGGCCCCTTCCTGCACCGACTTGGTCCTaGAGGCCTCCATCTCCGGGG +
Preference number: 4 (lower is better)
Translates to: IYLLASVTSICRSRRPLPAPTWS*RPPSPG
Trigger: CCCCGGAGATGGAGGCCTCCAGGACCAAGTCGGTGC...AGGAAGGGGCCGCCTACTCCTGCAAATGCTTGTGACAGATGCCAGGAGGTAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR CCA 90 bp ATCTACCTCCTGGCATCTGTCACAAGCATTTGCAGGAGTAGGCGGCCCCTTCCTTGGGAGATCCGGGCATaGGGTGGCCCAACAGGGGCT +
Preference number: 4 (lower is better)
Translates to: IYLLASVTSICRSRRPLPWEIRA*GGPTGA
Trigger: AGCCCCTGTTGGGCCACCCCATGCCCGGATCTCCCA...AGGAAGGGGCCGCCTACTCCTGCAAATGCTTGTGACAGATGCCAGGAGGTAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR CCA 90 bp GGCAGAAGGGACCCTGAGGACATTAATAAATATGGACGGGCGGTCCCTGGAGGCGGCCAGAGATTCCTTTaGGTCCAGTGGGGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: GRRDPEDINKYGRAVPGGGQRFL*VQWGLG
Trigger: CCCCAGGCCCCACTGGACCCAAAGGAATCTCTGGCC...GCCTCCAGGGACCGCCCGTCCATATTTATTAATGTCCTCAGGGTCCCTTCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334018.11
ENST00000404820.7
CDS-3UTR CCA 90 bp ATCTACCTCCTGGCATCTGTCACAAGCATTTGCAGGAGTAGGCGGCCCCTTCCTTCTCGTCCCGGCTCCTaGGGGCCACGATCCGGTAGT +
Preference number: 4 (lower is better)
Translates to: IYLLASVTSICRSRRPLPSRPGS*GPRSGS
Trigger: ACTACCGGATCGTGGCCCCCAGGAGCCGGGACGAGA...AGGAAGGGGCCGCCTACTCCTGCAAATGCTTGTGACAGATGCCAGGAGGTAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR TCA 90 bp GAAGACTGCCCCCTGCCCTGTCATCTCTGCATGTGCCGAGCCCCAGCTCCTGACGGTTGTTGGTCTCAGTaGAGGTGTTGGACAGCAATG +
Preference number: 4 (lower is better)
Translates to: EDCPLPCHLCMCRAPAPDGCWSQ*RCWTAM
Trigger: CATTGCTGTCCAACACCTTCACTGAGACCAACAACC...GTCAGGAGCTGGGGCTCGGCACATGCAGAGATGACAGGGCAGGGGGCAGTCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR TCA 90 bp ATCTACCTCCTGGCATCTGTCACAAGCATTTGCAGGAGTAGGCGGCCCCTTCCTCCTGGGGGTCCTATGTaGCCAGGACTCCCAGGGACA +
Preference number: 4 (lower is better)
Translates to: IYLLASVTSICRSRRPLPPGGPM*PGLPGT
Trigger: TGTCCCTGGGAGTCCTGGTCACATAGGACCCCCAGG...AGGAAGGGGCCGCCTACTCCTGCAAATGCTTGTGACAGATGCCAGGAGGTAGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334018.11
ENST00000404820.7
CDS-3UTR TCA 90 bp CCTTGCTCAGCCTCAGACATGTGCATGGTGCCAGGACTGAGACCTGCTTACCCCGCATGGTGCCAGGACTaGGACCTGCTTACCCCTAAG +
Preference number: 4 (lower is better)
Translates to: PCSASDMCMVPGLRPAYPAWCQD*DLLTPK
Trigger: CTTAGGGGTAAGCAGGTCTCAGTCCTGGCACCATGC...GGGGTAAGCAGGTCTCAGTCCTGGCACCATGCACATGTCTGAGGCTGAGCAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR TCA 90 bp CCTGAGGACATTAATAAATATGGACGGGCGGTCCCTGGAGGCAGCTGGCCGAGTCTCAGAGGGAAGAACTaGGGCAAGAAGCCCCCGGTG +
Preference number: 4 (lower is better)
Translates to: PEDINKYGRAVPGGSWPSLRGKN*GKKPPV
Trigger: CACCGGGGGCTTCTTGCCTCAGTTCTTCCCTCTGAG...ACTCGGCCAGCTGCCTCCAGGGACCGCCCGTCCATATTTATTAATGTCCTCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR TCA 90 bp AGGGACCCTGAGGACATTAATAAATATGGACGGGCGGTCCCTGGAGGCAGCTGGCCACGCAGTCCTATGTaGCCAGGACTCCCAGGGACA +
Preference number: 4 (lower is better)
Translates to: RDPEDINKYGRAVPGGSWPRSPM*PGLPGT
Trigger: TGTCCCTGGGAGTCCTGGTCACATAGGACTGCGTGG...CCAGCTGCCTCCAGGGACCGCCCGTCCATATTTATTAATGTCCTCAGGGTCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404755.7
CDS-3UTR GCA 90 bp ATCTACCTCCTGGCATCTGTCACAAGCATTTGCAGGAGTAGGCGGCCCCTTCCTTCCGCCGCATGGTACTaGCCGACCACATGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: IYLLASVTSICRSRRPLPSAAWY*PTTWAP
Trigger: TGGAGCCCATGTGGTCGGGCAGTACCATGCGGCGGA...AGGAAGGGGCCGCCTACTCCTGCAAATGCTTGTGACAGATGCCAGGAGGTAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR GCA 90 bp TTGCTCAGCCTCAGACATGTGCATGGTGCCAGGACTGAGACCTGCTTACCCCTATCCGCCGCATGGTACTaGCCGACCACATGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: LLSLRHVHGARTETCLPLSAAWY*PTTWAP
Trigger: TGGAGCCCATGTGGTCGGGCAGTACCATGCGGCGGA...TAGGGGTAAGCAGGTCTCAGTCCTGGCACCATGCACATGTCTGAGGCTGAGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR GCA 90 bp GAAGACTGCCCCCTGCCCTGTCATCTCTGCATGTGCCGAGCCCCAGCTCCTGACGTTGGAGGTACTGGCTaGTCTATGACAGTCAGCATG +
Preference number: 4 (lower is better)
Translates to: EDCPLPCHLCMCRAPAPDVGGTG*SMTVSM
Trigger: CATGCTGACTGTCATAGAGCAGCCAGTACCTCCAAC...GTCAGGAGCTGGGGCTCGGCACATGCAGAGATGACAGGGCAGGGGGCAGTCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR GCA 90 bp CCTTGCTCAGCCTCAGACATGTGCATGGTGCCAGGACTGAGACCTGCTTACCCCAGCAATGGGTCTCCATaGTGGGAGATCCGGGCATGG +
Preference number: 4 (lower is better)
Translates to: PCSASDMCMVPGLRPAYPSNGSP*WEIRAW
Trigger: CCATGCCCGGATCTCCCAGCATGGAGACCCATTGCT...GGGGTAAGCAGGTCTCAGTCCTGGCACCATGCACATGTCTGAGGCTGAGCAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR GCA 90 bp AGGGACCCTGAGGACATTAATAAATATGGACGGGCGGTCCCTGGAGGCAGCTGGCTGCCCTGTCATCTCTaGATGTGCCGAGCCCCAGCT +
Preference number: 4 (lower is better)
Translates to: RDPEDINKYGRAVPGGSWLPCHL*MCRAPA
Trigger: AGCTGGGGCTCGGCACATGCAGAGATGACAGGGCAG...CCAGCTGCCTCCAGGGACCGCCCGTCCATATTTATTAATGTCCTCAGGGTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR GCA 90 bp TTGCTCAGCCTCAGACATGTGCATGGTGCCAGGACTGAGACCTGCTTACCCCTAGAGGGGGAGGAAGACTaGCCCCTGCCCTGTCATCTC +
Preference number: 4 (lower is better)
Translates to: LLSLRHVHGARTETCLPLEGEED*PLPCHL
Trigger: GAGATGACAGGGCAGGGGGCAGTCTTCCTCCCCCTC...TAGGGGTAAGCAGGTCTCAGTCCTGGCACCATGCACATGTCTGAGGCTGAGCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR CCA 90 bp TTGCTCAGCCTCAGACATGTGCATGGTGCCAGGACTGAGACCTGCTTACCCCTAAACCTGAGAAGGCTGTaGGCCGAAGCGCCATCCGCC +
Preference number: 4 (lower is better)
Translates to: LLSLRHVHGARTETCLPLNLRRL*AEAPSA
Trigger: GGCGGATGGCGCTTCGGCCCACAGCCTTCTCAGGTT...TAGGGGTAAGCAGGTCTCAGTCCTGGCACCATGCACATGTCTGAGGCTGAGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR CCA 90 bp CCTTTGGGCCTGGATGCTCAGACAGCAGATGAGACGAAGCCTTGTACCTCTATCGCACCGACTTGGTCCTaGAGGCCTCCATCTCCGGGG +
Preference number: 4 (lower is better)
Translates to: PLGLDAQTADETKPCTSIAPTWS*RPPSPG
Trigger: CCCCGGAGATGGAGGCCTCCAGGACCAAGTCGGTGC...GATAGAGGTACAAGGCTTCGTCTCATCTGCTGTCTGAGCATCCAGGCCCAAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR CCA 90 bp GGCAGAAGGGACCCTGAGGACATTAATAAATATGGACGGGCGGTCCCTGGAGGCCCCCAAGCACCGACTTaGTCCTGGAGGCCTCCATCT +
Preference number: 4 (lower is better)
Translates to: GRRDPEDINKYGRAVPGGPQAPT*SWRPPS
Trigger: AGATGGAGGCCTCCAGGACCAAGTCGGTGCTTGGGG...GCCTCCAGGGACCGCCCGTCCATATTTATTAATGTCCTCAGGGTCCCTTCTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR CCA 90 bp ATCTACCTCCTGGCATCTGTCACAAGCATTTGCAGGAGTAGGCGGCCCCTTCCTGGCCAGAGATTCCTTTaGGTCCAGTGGGGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: IYLLASVTSICRSRRPLPGQRFL*VQWGLG
Trigger: CCCCAGGCCCCACTGGACCCAAAGGAATCTCTGGCC...AGGAAGGGGCCGCCTACTCCTGCAAATGCTTGTGACAGATGCCAGGAGGTAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334018.11
ENST00000404820.7
CDS-3UTR CCA 90 bp CCTTGCTCAGCCTCAGACATGTGCATGGTGCCAGGACTGAGACCTGCTTACCCCCCACGATCCGGTAGTTaGTTGCATGTCCGCCCCTCT +
Preference number: 4 (lower is better)
Translates to: PCSASDMCMVPGLRPAYPPRSGS*LHVRPS
Trigger: AGAGGGGCGGACATGCAACCAACTACCGGATCGTGG...GGGGTAAGCAGGTCTCAGTCCTGGCACCATGCACATGTCTGAGGCTGAGCAAGG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR CCA 90 bp GGCAGAAGGGACCCTGAGGACATTAATAAATATGGACGGGCGGTCCCTGGAGGCCCCAGACCCCAGCTCTaGTTCTGGCCAGATGATGGC +
Preference number: 4 (lower is better)
Translates to: GRRDPEDINKYGRAVPGGPRPQL*FWPDDG
Trigger: GCCATCATCTGGCCAGAACCAGAGCTGGGGTCTGGG...GCCTCCAGGGACCGCCCGTCCATATTTATTAATGTCCTCAGGGTCCCTTCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404820.7
CDS-3UTR TCA 90 bp CAGAGGGAAGAACTGAGGCAAGAAGCCCCCGGTGATCCAGTCAGAGGATTGGGCATTCTGCACATGGCATaGGATGGTGCGGGTCACCAC +
Preference number: 4 (lower is better)
Translates to: QREELRQEAPGDPVRGLGILHMA*DGAGHH
Trigger: GTGGTGACCCGCACCATCTCATGCCATGTGCAGAAT...GCCCAATCCTCTGACTGGATCACCGGGGGCTTCTTGCCTCAGTTCTTCCCTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR TCA 90 bp AGGGACCCTGAGGACATTAATAAATATGGACGGGCGGTCCCTGGAGGCAGCTGGGCAGTTGAGACAACCTaGGAAGGCTGTGGGCCGAAG +
Preference number: 4 (lower is better)
Translates to: RDPEDINKYGRAVPGGSWAVETT*EGCGPK
Trigger: CTTCGGCCCACAGCCTTCTCAGGTTGTCTCAACTGC...CCAGCTGCCTCCAGGGACCGCCCGTCCATATTTATTAATGTCCTCAGGGTCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR TCA 90 bp AGGGACCCTGAGGACATTAATAAATATGGACGGGCGGTCCCTGGAGGCAGCTGGGCATGGTGCCAGGACTaGGACCTGCTTACCCCTAAG +
Preference number: 4 (lower is better)
Translates to: RDPEDINKYGRAVPGGSWAWCQD*DLLTPK
Trigger: CTTAGGGGTAAGCAGGTCTCAGTCCTGGCACCATGC...CCAGCTGCCTCCAGGGACCGCCCGTCCATATTTATTAATGTCCTCAGGGTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR TCA 90 bp ACATCTACCTCCTGGCATCTGTCACAAGCATTTGCAGGAGTAGGCGGCCCCTTCGCAAGAAGCCCCCGGTaGTCCAGTCAGAGGATTGGG +
Preference number: 4 (lower is better)
Translates to: TSTSWHLSQAFAGVGGPFARSPR*SSQRIG
Trigger: CCCAATCCTCTGACTGGATCACCGGGGGCTTCTTGC...GAAGGGGCCGCCTACTCCTGCAAATGCTTGTGACAGATGCCAGGAGGTAGATGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR TCA 90 bp TTGCTCAGCCTCAGACATGTGCATGGTGCCAGGACTGAGACCTGCTTACCCCTAGCAAGAAGCCCCCGGTaGTCCAGTCAGAGGATTGGG +
Preference number: 4 (lower is better)
Translates to: LLSLRHVHGARTETCLPLARSPR*SSQRIG
Trigger: CCCAATCCTCTGACTGGATCACCGGGGGCTTCTTGC...TAGGGGTAAGCAGGTCTCAGTCCTGGCACCATGCACATGTCTGAGGCTGAGCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR TCA 90 bp ACATCTACCTCCTGGCATCTGTCACAAGCATTTGCAGGAGTAGGCGGCCCCTTCCTCAGAGGGAAGAACTaGGGCAAGAAGCCCCCGGTG +
Preference number: 4 (lower is better)
Translates to: TSTSWHLSQAFAGVGGPFLRGKN*GKKPPV
Trigger: CACCGGGGGCTTCTTGCCTCAGTTCTTCCCTCTGAG...GAAGGGGCCGCCTACTCCTGCAAATGCTTGTGACAGATGCCAGGAGGTAGATGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR GCA 90 bp GCACACATCTACCTCCTGGCATCTGTCACAAGCATTTGCAGGAGTAGGCGGCCCGGAGGCAGAGGAAGCTaGAACTTCCTCGCAGCTCAC +
Preference number: 4 (lower is better)
Translates to: AHIYLLASVTSICRSRRPGGRGS*NFLAAH
Trigger: GTGAGCTGCGAGGAAGTTGCAGCTTCCTCTGCCTCC...GGGCCGCCTACTCCTGCAAATGCTTGTGACAGATGCCAGGAGGTAGATGTGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR GCA 90 bp AGGGACCCTGAGGACATTAATAAATATGGACGGGCGGTCCCTGGAGGCAGCTGGGGAGGCAGAGGAAGCTaGAACTTCCTCGCAGCTCAC +
Preference number: 4 (lower is better)
Translates to: RDPEDINKYGRAVPGGSWGGRGS*NFLAAH
Trigger: GTGAGCTGCGAGGAAGTTGCAGCTTCCTCTGCCTCC...CCAGCTGCCTCCAGGGACCGCCCGTCCATATTTATTAATGTCCTCAGGGTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR GCA 90 bp GCACACATCTACCTCCTGGCATCTGTCACAAGCATTTGCAGGAGTAGGCGGCCCAGCAATGGGTCTCCATaGTGGGAGATCCGGGCATGG +
Preference number: 4 (lower is better)
Translates to: AHIYLLASVTSICRSRRPSNGSP*WEIRAW
Trigger: CCATGCCCGGATCTCCCAGCATGGAGACCCATTGCT...GGGCCGCCTACTCCTGCAAATGCTTGTGACAGATGCCAGGAGGTAGATGTGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR GCA 90 bp AGGGACCCTGAGGACATTAATAAATATGGACGGGCGGTCCCTGGAGGCAGCTGGAGCAATGGGTCTCCATaGTGGGAGATCCGGGCATGG +
Preference number: 4 (lower is better)
Translates to: RDPEDINKYGRAVPGGSWSNGSP*WEIRAW
Trigger: CCATGCCCGGATCTCCCAGCATGGAGACCCATTGCT...CCAGCTGCCTCCAGGGACCGCCCGTCCATATTTATTAATGTCCTCAGGGTCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR GCA 90 bp AGGGACCCTGAGGACATTAATAAATATGGACGGGCGGTCCCTGGAGGCAGCTGGGATCCGGTAGTTGGTTaGATGTCCGCCCCTCTTGCC +
Preference number: 4 (lower is better)
Translates to: RDPEDINKYGRAVPGGSWDPVVG*MSAPLA
Trigger: GGCAAGAGGGGCGGACATGCAACCAACTACCGGATC...CCAGCTGCCTCCAGGGACCGCCCGTCCATATTTATTAATGTCCTCAGGGTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR GCA 90 bp CAGAGGGAAGAACTGAGGCAAGAAGCCCCCGGTGATCCAGTCAGAGGATTGGGCGCCAGGACTGAGACCTaGTTACCCCTAAGGCCTAGA +
Preference number: 4 (lower is better)
Translates to: QREELRQEAPGDPVRGLGARTET*LPLRPR
Trigger: TCTAGGCCTTAGGGGTAAGCAGGTCTCAGTCCTGGC...GCCCAATCCTCTGACTGGATCACCGGGGGCTTCTTGCCTCAGTTCTTCCCTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR GCA 90 bp CCTGAGGACATTAATAAATATGGACGGGCGGTCCCTGGAGGCAGCTGGCCGAGTTGTCATCTCTGCATGTaGCGAGCCCCAGCTCCTGAC +
Preference number: 4 (lower is better)
Translates to: PEDINKYGRAVPGGSWPSCHLCM*RAPAPD
Trigger: GTCAGGAGCTGGGGCTCGGCACATGCAGAGATGACA...ACTCGGCCAGCTGCCTCCAGGGACCGCCCGTCCATATTTATTAATGTCCTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR CCA 90 bp ACATCTACCTCCTGGCATCTGTCACAAGCATTTGCAGGAGTAGGCGGCCCCTTCTACTGCCCGACCACATaGGCTCCAAGGAGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: TSTSWHLSQAFAGVGGPFYCPTT*APRRQR
Trigger: CCTCTGCCTCCTTGGAGCCCATGTGGTCGGGCAGTA...GAAGGGGCCGCCTACTCCTGCAAATGCTTGTGACAGATGCCAGGAGGTAGATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR CCA 90 bp CCTGAGGACATTAATAAATATGGACGGGCGGTCCCTGGAGGCAGCTGGCCGAGTGTCCTCAGGGGTAGCTaGTGTTGGAGGTACTGGCTG +
Preference number: 4 (lower is better)
Translates to: PEDINKYGRAVPGGSWPSVLRGS*CWRYWL
Trigger: CAGCCAGTACCTCCAACACCAGCTACCCCTGAGGAC...ACTCGGCCAGCTGCCTCCAGGGACCGCCCGTCCATATTTATTAATGTCCTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR CCA 90 bp GGCAGAAGGGACCCTGAGGACATTAATAAATATGGACGGGCGGTCCCTGGAGGCGTCCTCAGGGGTAGCTaGTGTTGGAGGTACTGGCTG +
Preference number: 4 (lower is better)
Translates to: GRRDPEDINKYGRAVPGGVLRGS*CWRYWL
Trigger: CAGCCAGTACCTCCAACACCAGCTACCCCTGAGGAC...GCCTCCAGGGACCGCCCGTCCATATTTATTAATGTCCTCAGGGTCCCTTCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR CCA 90 bp ACATCTACCTCCTGGCATCTGTCACAAGCATTTGCAGGAGTAGGCGGCCCCTTCCCCCAAGCACCGACTTaGTCCTGGAGGCCTCCATCT +
Preference number: 4 (lower is better)
Translates to: TSTSWHLSQAFAGVGGPFPQAPT*SWRPPS
Trigger: AGATGGAGGCCTCCAGGACCAAGTCGGTGCTTGGGG...GAAGGGGCCGCCTACTCCTGCAAATGCTTGTGACAGATGCCAGGAGGTAGATGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR CCA 90 bp CCTGAGGACATTAATAAATATGGACGGGCGGTCCCTGGAGGCAGCTGGCCGAGTAATGGGTCTCCATGCTaGGAGATCCGGGCATGGGGT +
Preference number: 4 (lower is better)
Translates to: PEDINKYGRAVPGGSWPSNGSPC*EIRAWG
Trigger: ACCCCATGCCCGGATCTCCCAGCATGGAGACCCATT...ACTCGGCCAGCTGCCTCCAGGGACCGCCCGTCCATATTTATTAATGTCCTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR CCA 90 bp CACACATCTACCTCCTGGCATCTGTCACAAGCATTTGCAGGAGTAGGCGGCCCCAATGGGTCTCCATGCTaGGAGATCCGGGCATGGGGT +
Preference number: 4 (lower is better)
Translates to: HTSTSWHLSQAFAGVGGPNGSPC*EIRAWG
Trigger: ACCCCATGCCCGGATCTCCCAGCATGGAGACCCATT...GGGGCCGCCTACTCCTGCAAATGCTTGTGACAGATGCCAGGAGGTAGATGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR CCA 90 bp AGGGACCCTGAGGACATTAATAAATATGGACGGGCGGTCCCTGGAGGCAGCTGGGGTCCCTGGGGCCAGTaGTTGTTGGTCTCAGTGAAG +
Preference number: 4 (lower is better)
Translates to: RDPEDINKYGRAVPGGSWGPWGQ*LLVSVK
Trigger: CTTCACTGAGACCAACAACCACTGGCCCCAGGGACC...CCAGCTGCCTCCAGGGACCGCCCGTCCATATTTATTAATGTCCTCAGGGTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR CCA 90 bp GCACACATCTACCTCCTGGCATCTGTCACAAGCATTTGCAGGAGTAGGCGGCCCGGTCCCTGGGGCCAGTaGTTGTTGGTCTCAGTGAAG +
Preference number: 4 (lower is better)
Translates to: AHIYLLASVTSICRSRRPGPWGQ*LLVSVK
Trigger: CTTCACTGAGACCAACAACCACTGGCCCCAGGGACC...GGGCCGCCTACTCCTGCAAATGCTTGTGACAGATGCCAGGAGGTAGATGTGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR CCA 90 bp CCTTGCTCAGCCTCAGACATGTGCATGGTGCCAGGACTGAGACCTGCTTACCCCCAGTGCCTTTGGGCCTaGATGCTCAGACAGCAGATG +
Preference number: 4 (lower is better)
Translates to: PCSASDMCMVPGLRPAYPQCLWA*MLRQQM
Trigger: CATCTGCTGTCTGAGCATCCAGGCCCAAAGGCACTG...GGGGTAAGCAGGTCTCAGTCCTGGCACCATGCACATGTCTGAGGCTGAGCAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR TCA 90 bp CCTGAGGACATTAATAAATATGGACGGGCGGTCCCTGGAGGCAGCTGGCCGAGTATTCTGCACATGGCATaGGATGGTGCGGGTCACCAC +
Preference number: 4 (lower is better)
Translates to: PEDINKYGRAVPGGSWPSILHMA*DGAGHH
Trigger: GTGGTGACCCGCACCATCTCATGCCATGTGCAGAAT...ACTCGGCCAGCTGCCTCCAGGGACCGCCCGTCCATATTTATTAATGTCCTCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR TCA 90 bp AGGGACCCTGAGGACATTAATAAATATGGACGGGCGGTCCCTGGAGGCAGCTGGCCGCTCTGTCAGCTCTaGCACTTTGCTGCAGTTGAG +
Preference number: 4 (lower is better)
Translates to: RDPEDINKYGRAVPGGSWPLCQL*HFAAVE
Trigger: CTCAACTGCAGCAAAGTGTCAGAGCTGACAGAGCGG...CCAGCTGCCTCCAGGGACCGCCCGTCCATATTTATTAATGTCCTCAGGGTCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR TCA 90 bp CACACATCTACCTCCTGGCATCTGTCACAAGCATTTGCAGGAGTAGGCGGCCCCCCGCTCTGTCAGCTCTaGCACTTTGCTGCAGTTGAG +
Preference number: 4 (lower is better)
Translates to: HTSTSWHLSQAFAGVGGPPLCQL*HFAAVE
Trigger: CTCAACTGCAGCAAAGTGTCAGAGCTGACAGAGCGG...GGGGCCGCCTACTCCTGCAAATGCTTGTGACAGATGCCAGGAGGTAGATGTGTG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR TCA 90 bp CCTGAGGACATTAATAAATATGGACGGGCGGTCCCTGGAGGCAGCTGGCCGAGTTTCACAGAGGGAAACTaGGGCCCAAGCCTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: PEDINKYGRAVPGGSWPSFTEGN*GPSLSS
Trigger: AGAGGAGAGGCTTGGGCCTCAGTTTCCCTCTGTGAA...ACTCGGCCAGCTGCCTCCAGGGACCGCCCGTCCATATTTATTAATGTCCTCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR TCA 90 bp CCTTGCTCAGCCTCAGACATGTGCATGGTGCCAGGACTGAGACCTGCTTACCCCTGCTCAGACAGCAGATaGGACGAAGCCTTGTACCTC +
Preference number: 4 (lower is better)
Translates to: PCSASDMCMVPGLRPAYPCSDSR*DEALYL
Trigger: GAGGTACAAGGCTTCGTCTCATCTGCTGTCTGAGCA...GGGGTAAGCAGGTCTCAGTCCTGGCACCATGCACATGTCTGAGGCTGAGCAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR GCA 90 bp CCTGAGGACATTAATAAATATGGACGGGCGGTCCCTGGAGGCAGCTGGCCGAGTCATGGCATGAGATGGTaGGGGTCACCACATAGGAGC +
Preference number: 4 (lower is better)
Translates to: PEDINKYGRAVPGGSWPSHGMRW*GSPHRS
Trigger: GCTCCTATGTGGTGACCCGCACCATCTCATGCCATG...ACTCGGCCAGCTGCCTCCAGGGACCGCCCGTCCATATTTATTAATGTCCTCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR GCA 90 bp CACACATCTACCTCCTGGCATCTGTCACAAGCATTTGCAGGAGTAGGCGGCCCCCATGGCATGAGATGGTaGGGGTCACCACATAGGAGC +
Preference number: 4 (lower is better)
Translates to: HTSTSWHLSQAFAGVGGPHGMRW*GSPHRS
Trigger: GCTCCTATGTGGTGACCCGCACCATCTCATGCCATG...GGGGCCGCCTACTCCTGCAAATGCTTGTGACAGATGCCAGGAGGTAGATGTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR GCA 90 bp GGCAGAAGGGACCCTGAGGACATTAATAAATATGGACGGGCGGTCCCTGGAGGCCATGGCATGAGATGGTaGGGGTCACCACATAGGAGC +
Preference number: 4 (lower is better)
Translates to: GRRDPEDINKYGRAVPGGHGMRW*GSPHRS
Trigger: GCTCCTATGTGGTGACCCGCACCATCTCATGCCATG...GCCTCCAGGGACCGCCCGTCCATATTTATTAATGTCCTCAGGGTCCCTTCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR GCA 90 bp CAGAGGGAAGAACTGAGGCAAGAAGCCCCCGGTGATCCAGTCAGAGGATTGGGCCTCGCTGAAGGTAGGTaGCATTCTGCACATGGCATG +
Preference number: 4 (lower is better)
Translates to: QREELRQEAPGDPVRGLGLAEGR*HSAHGM
Trigger: CATGCCATGTGCAGAATGGCACCTACCTTCAGCGAG...GCCCAATCCTCTGACTGGATCACCGGGGGCTTCTTGCCTCAGTTCTTCCCTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR GCA 90 bp TTGCTCAGCCTCAGACATGTGCATGGTGCCAGGACTGAGACCTGCTTACCCCTAGGAGGCAGAGGAAGCTaGAACTTCCTCGCAGCTCAC +
Preference number: 4 (lower is better)
Translates to: LLSLRHVHGARTETCLPLGGRGS*NFLAAH
Trigger: GTGAGCTGCGAGGAAGTTGCAGCTTCCTCTGCCTCC...TAGGGGTAAGCAGGTCTCAGTCCTGGCACCATGCACATGTCTGAGGCTGAGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR GCA 90 bp ACATCTACCTCCTGGCATCTGTCACAAGCATTTGCAGGAGTAGGCGGCCCCTTCGATCCGGTAGTTGGTTaGATGTCCGCCCCTCTTGCC +
Preference number: 4 (lower is better)
Translates to: TSTSWHLSQAFAGVGGPFDPVVG*MSAPLA
Trigger: GGCAAGAGGGGCGGACATGCAACCAACTACCGGATC...GAAGGGGCCGCCTACTCCTGCAAATGCTTGTGACAGATGCCAGGAGGTAGATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR GCA 90 bp AGGGACCCTGAGGACATTAATAAATATGGACGGGCGGTCCCTGGAGGCAGCTGGGCCAGGACTGAGACCTaGTTACCCCTAAGGCCTAGA +
Preference number: 4 (lower is better)
Translates to: RDPEDINKYGRAVPGGSWARTET*LPLRPR
Trigger: TCTAGGCCTTAGGGGTAAGCAGGTCTCAGTCCTGGC...CCAGCTGCCTCCAGGGACCGCCCGTCCATATTTATTAATGTCCTCAGGGTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR GCA 90 bp CCTTGCTCAGCCTCAGACATGTGCATGGTGCCAGGACTGAGACCTGCTTACCCCTCAGCCTCAGACATGTaGATGGTGCCAGGACTGAGA +
Preference number: 4 (lower is better)
Translates to: PCSASDMCMVPGLRPAYPSASDM*MVPGLR
Trigger: TCTCAGTCCTGGCACCATGCACATGTCTGAGGCTGA...GGGGTAAGCAGGTCTCAGTCCTGGCACCATGCACATGTCTGAGGCTGAGCAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR GCA 90 bp ATCTACCTCCTGGCATCTGTCACAAGCATTTGCAGGAGTAGGCGGCCCCTTCCTTGTCATCTCTGCATGTaGCGAGCCCCAGCTCCTGAC +
Preference number: 4 (lower is better)
Translates to: IYLLASVTSICRSRRPLPCHLCM*RAPAPD
Trigger: GTCAGGAGCTGGGGCTCGGCACATGCAGAGATGACA...AGGAAGGGGCCGCCTACTCCTGCAAATGCTTGTGACAGATGCCAGGAGGTAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR GCA 90 bp CAGAGGGAAGAACTGAGGCAAGAAGCCCCCGGTGATCCAGTCAGAGGATTGGGCTCTGTCACAAGCATTTaGAGGAGTAGGCGGCCCCTT +
Preference number: 4 (lower is better)
Translates to: QREELRQEAPGDPVRGLGSVTSI*RSRRPL
Trigger: AAGGGGCCGCCTACTCCTGCAAATGCTTGTGACAGA...GCCCAATCCTCTGACTGGATCACCGGGGGCTTCTTGCCTCAGTTCTTCCCTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR CCA 90 bp CACACATCTACCTCCTGGCATCTGTCACAAGCATTTGCAGGAGTAGGCGGCCCCGTGCCATTCTGCACATaGCATGAGATGGTGCGGGTC +
Preference number: 4 (lower is better)
Translates to: HTSTSWHLSQAFAGVGGPVPFCT*HEMVRV
Trigger: GACCCGCACCATCTCATGCCATGTGCAGAATGGCAC...GGGGCCGCCTACTCCTGCAAATGCTTGTGACAGATGCCAGGAGGTAGATGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR CCA 90 bp GCACACATCTACCTCCTGGCATCTGTCACAAGCATTTGCAGGAGTAGGCGGCCCGTGCCATTCTGCACATaGCATGAGATGGTGCGGGTC +
Preference number: 4 (lower is better)
Translates to: AHIYLLASVTSICRSRRPVPFCT*HEMVRV
Trigger: GACCCGCACCATCTCATGCCATGTGCAGAATGGCAC...GGGCCGCCTACTCCTGCAAATGCTTGTGACAGATGCCAGGAGGTAGATGTGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR CCA 90 bp GCACACATCTACCTCCTGGCATCTGTCACAAGCATTTGCAGGAGTAGGCGGCCCTCAGCATGGTCATCTTaGCCTCCAGCACCTTCAGCC +
Preference number: 4 (lower is better)
Translates to: AHIYLLASVTSICRSRRPSAWSS*PPAPSA
Trigger: GGCTGAAGGTGCTGGAGGCCAAGATGACCATGCTGA...GGGCCGCCTACTCCTGCAAATGCTTGTGACAGATGCCAGGAGGTAGATGTGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR CCA 90 bp CCTTGCTCAGCCTCAGACATGTGCATGGTGCCAGGACTGAGACCTGCTTACCCCAGGGGTAGCTGGTGTTaGAGGTACTGGCTGCTCTAT +
Preference number: 4 (lower is better)
Translates to: PCSASDMCMVPGLRPAYPRGSWC*RYWLLY
Trigger: ATAGAGCAGCCAGTACCTCCAACACCAGCTACCCCT...GGGGTAAGCAGGTCTCAGTCCTGGCACCATGCACATGTCTGAGGCTGAGCAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR CCA 90 bp CCTTTGGGCCTGGATGCTCAGACAGCAGATGAGACGAAGCCTTGTACCTCTATCCCCCAAGCACCGACTTaGTCCTGGAGGCCTCCATCT +
Preference number: 4 (lower is better)
Translates to: PLGLDAQTADETKPCTSIPQAPT*SWRPPS
Trigger: AGATGGAGGCCTCCAGGACCAAGTCGGTGCTTGGGG...GATAGAGGTACAAGGCTTCGTCTCATCTGCTGTCTGAGCATCCAGGCCCAAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR CCA 90 bp ACATCTACCTCCTGGCATCTGTCACAAGCATTTGCAGGAGTAGGCGGCCCCTTCAATGGGTCTCCATGCTaGGAGATCCGGGCATGGGGT +
Preference number: 4 (lower is better)
Translates to: TSTSWHLSQAFAGVGGPFNGSPC*EIRAWG
Trigger: ACCCCATGCCCGGATCTCCCAGCATGGAGACCCATT...GAAGGGGCCGCCTACTCCTGCAAATGCTTGTGACAGATGCCAGGAGGTAGATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR CCA 90 bp CACACATCTACCTCCTGGCATCTGTCACAAGCATTTGCAGGAGTAGGCGGCCCCCTCGCCCTTCTCTCCTaGGTGGCCAGAGATTCCTTT +
Preference number: 4 (lower is better)
Translates to: HTSTSWHLSQAFAGVGGPLALLS*VARDSF
Trigger: AAAGGAATCTCTGGCCACCCAGGAGAGAAGGGCGAG...GGGGCCGCCTACTCCTGCAAATGCTTGTGACAGATGCCAGGAGGTAGATGTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334018.11
ENST00000404820.7
CDS-3UTR CCA 90 bp ATCTACCTCCTGGCATCTGTCACAAGCATTTGCAGGAGTAGGCGGCCCCTTCCTCCACGATCCGGTAGTTaGTTGCATGTCCGCCCCTCT +
Preference number: 4 (lower is better)
Translates to: IYLLASVTSICRSRRPLPPRSGS*LHVRPS
Trigger: AGAGGGGCGGACATGCAACCAACTACCGGATCGTGG...AGGAAGGGGCCGCCTACTCCTGCAAATGCTTGTGACAGATGCCAGGAGGTAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR CCA 90 bp GCACACATCTACCTCCTGGCATCTGTCACAAGCATTTGCAGGAGTAGGCGGCCCCAGTGCCTTTGGGCCTaGATGCTCAGACAGCAGATG +
Preference number: 4 (lower is better)
Translates to: AHIYLLASVTSICRSRRPQCLWA*MLRQQM
Trigger: CATCTGCTGTCTGAGCATCCAGGCCCAAAGGCACTG...GGGCCGCCTACTCCTGCAAATGCTTGTGACAGATGCCAGGAGGTAGATGTGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR CCA 90 bp AGGGACCCTGAGGACATTAATAAATATGGACGGGCGGTCCCTGGAGGCAGCTGGCAGTGCCTTTGGGCCTaGATGCTCAGACAGCAGATG +
Preference number: 4 (lower is better)
Translates to: RDPEDINKYGRAVPGGSWQCLWA*MLRQQM
Trigger: CATCTGCTGTCTGAGCATCCAGGCCCAAAGGCACTG...CCAGCTGCCTCCAGGGACCGCCCGTCCATATTTATTAATGTCCTCAGGGTCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR CCA 90 bp CAGAGGGAAGAACTGAGGCAAGAAGCCCCCGGTGATCCAGTCAGAGGATTGGGCGGTAGGGGCCTTTATTaGCCAGCACACATCTACCTC +
Preference number: 4 (lower is better)
Translates to: QREELRQEAPGDPVRGLGGRGLY*PAHIYL
Trigger: GAGGTAGATGTGTGCTGGCCAATAAAGGCCCCTACC...GCCCAATCCTCTGACTGGATCACCGGGGGCTTCTTGCCTCAGTTCTTCCCTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR TCA 90 bp CCTTTGGGCCTGGATGCTCAGACAGCAGATGAGACGAAGCCTTGTACCTCTATCGCAGTTGAGACAACCTaGGAAGGCTGTGGGCCGAAG +
Preference number: 4 (lower is better)
Translates to: PLGLDAQTADETKPCTSIAVETT*EGCGPK
Trigger: CTTCGGCCCACAGCCTTCTCAGGTTGTCTCAACTGC...GATAGAGGTACAAGGCTTCGTCTCATCTGCTGTCTGAGCATCCAGGCCCAAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR TCA 90 bp CCTTGCTCAGCCTCAGACATGTGCATGGTGCCAGGACTGAGACCTGCTTACCCCACACTTTGCTGCAGTTaGGACAACCTGAGAAGGCTG +
Preference number: 4 (lower is better)
Translates to: PCSASDMCMVPGLRPAYPTLCCS*DNLRRL
Trigger: CAGCCTTCTCAGGTTGTCTCAACTGCAGCAAAGTGT...GGGGTAAGCAGGTCTCAGTCCTGGCACCATGCACATGTCTGAGGCTGAGCAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR TCA 90 bp ACATCTACCTCCTGGCATCTGTCACAAGCATTTGCAGGAGTAGGCGGCCCCTTCTTCACAGAGGGAAACTaGGGCCCAAGCCTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: TSTSWHLSQAFAGVGGPFFTEGN*GPSLSS
Trigger: AGAGGAGAGGCTTGGGCCTCAGTTTCCCTCTGTGAA...GAAGGGGCCGCCTACTCCTGCAAATGCTTGTGACAGATGCCAGGAGGTAGATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR GCA 90 bp ACATCTACCTCCTGGCATCTGTCACAAGCATTTGCAGGAGTAGGCGGCCCCTTCGCCAGGACTGAGACCTaGTTACCCCTAAGGCCTAGA +
Preference number: 4 (lower is better)
Translates to: TSTSWHLSQAFAGVGGPFARTET*LPLRPR
Trigger: TCTAGGCCTTAGGGGTAAGCAGGTCTCAGTCCTGGC...GAAGGGGCCGCCTACTCCTGCAAATGCTTGTGACAGATGCCAGGAGGTAGATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR GCA 90 bp GCACACATCTACCTCCTGGCATCTGTCACAAGCATTTGCAGGAGTAGGCGGCCCTCAGCCTCAGACATGTaGATGGTGCCAGGACTGAGA +
Preference number: 4 (lower is better)
Translates to: AHIYLLASVTSICRSRRPSASDM*MVPGLR
Trigger: TCTCAGTCCTGGCACCATGCACATGTCTGAGGCTGA...GGGCCGCCTACTCCTGCAAATGCTTGTGACAGATGCCAGGAGGTAGATGTGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR GCA 90 bp AGGGACCCTGAGGACATTAATAAATATGGACGGGCGGTCCCTGGAGGCAGCTGGTCTGTCACAAGCATTTaGAGGAGTAGGCGGCCCCTT +
Preference number: 4 (lower is better)
Translates to: RDPEDINKYGRAVPGGSWSVTSI*RSRRPL
Trigger: AAGGGGCCGCCTACTCCTGCAAATGCTTGTGACAGA...CCAGCTGCCTCCAGGGACCGCCCGTCCATATTTATTAATGTCCTCAGGGTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR CCA 90 bp ACATCTACCTCCTGGCATCTGTCACAAGCATTTGCAGGAGTAGGCGGCCCCTTCGCACATGGCATGAGATaGTGCGGGTCACCACATAGG +
Preference number: 4 (lower is better)
Translates to: TSTSWHLSQAFAGVGGPFAHGMR*CGSPHR
Trigger: CCTATGTGGTGACCCGCACCATCTCATGCCATGTGC...GAAGGGGCCGCCTACTCCTGCAAATGCTTGTGACAGATGCCAGGAGGTAGATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR CCA 90 bp TTGCTCAGCCTCAGACATGTGCATGGTGCCAGGACTGAGACCTGCTTACCCCTAGCACATGGCATGAGATaGTGCGGGTCACCACATAGG +
Preference number: 4 (lower is better)
Translates to: LLSLRHVHGARTETCLPLAHGMR*CGSPHR
Trigger: CCTATGTGGTGACCCGCACCATCTCATGCCATGTGC...TAGGGGTAAGCAGGTCTCAGTCCTGGCACCATGCACATGTCTGAGGCTGAGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR CCA 90 bp ATCTACCTCCTGGCATCTGTCACAAGCATTTGCAGGAGTAGGCGGCCCCTTCCTTCAGCATGGTCATCTTaGCCTCCAGCACCTTCAGCC +
Preference number: 4 (lower is better)
Translates to: IYLLASVTSICRSRRPLPSAWSS*PPAPSA
Trigger: GGCTGAAGGTGCTGGAGGCCAAGATGACCATGCTGA...AGGAAGGGGCCGCCTACTCCTGCAAATGCTTGTGACAGATGCCAGGAGGTAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR CCA 90 bp CACACATCTACCTCCTGGCATCTGTCACAAGCATTTGCAGGAGTAGGCGGCCCCAGGGGTAGCTGGTGTTaGAGGTACTGGCTGCTCTAT +
Preference number: 4 (lower is better)
Translates to: HTSTSWHLSQAFAGVGGPRGSWC*RYWLLY
Trigger: ATAGAGCAGCCAGTACCTCCAACACCAGCTACCCCT...GGGGCCGCCTACTCCTGCAAATGCTTGTGACAGATGCCAGGAGGTAGATGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR CCA 90 bp GGCAGAAGGGACCCTGAGGACATTAATAAATATGGACGGGCGGTCCCTGGAGGCGGTGTTGGACAGCAATaGGTCTCCATGCTGGGAGAT +
Preference number: 4 (lower is better)
Translates to: GRRDPEDINKYGRAVPGGGVGQQ*VSMLGD
Trigger: ATCTCCCAGCATGGAGACCCATTGCTGTCCAACACC...GCCTCCAGGGACCGCCCGTCCATATTTATTAATGTCCTCAGGGTCCCTTCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR CCA 90 bp AGGGACCCTGAGGACATTAATAAATATGGACGGGCGGTCCCTGGAGGCAGCTGGGGTGTTGGACAGCAATaGGTCTCCATGCTGGGAGAT +
Preference number: 4 (lower is better)
Translates to: RDPEDINKYGRAVPGGSWGVGQQ*VSMLGD
Trigger: ATCTCCCAGCATGGAGACCCATTGCTGTCCAACACC...CCAGCTGCCTCCAGGGACCGCCCGTCCATATTTATTAATGTCCTCAGGGTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR CCA 90 bp GCACACATCTACCTCCTGGCATCTGTCACAAGCATTTGCAGGAGTAGGCGGCCCGGTGTTGGACAGCAATaGGTCTCCATGCTGGGAGAT +
Preference number: 4 (lower is better)
Translates to: AHIYLLASVTSICRSRRPGVGQQ*VSMLGD
Trigger: ATCTCCCAGCATGGAGACCCATTGCTGTCCAACACC...GGGCCGCCTACTCCTGCAAATGCTTGTGACAGATGCCAGGAGGTAGATGTGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR CCA 90 bp CCTTTGGGCCTGGATGCTCAGACAGCAGATGAGACGAAGCCTTGTACCTCTATCGGTCCCTGGGGCCAGTaGTTGTTGGTCTCAGTGAAG +
Preference number: 4 (lower is better)
Translates to: PLGLDAQTADETKPCTSIGPWGQ*LLVSVK
Trigger: CTTCACTGAGACCAACAACCACTGGCCCCAGGGACC...GATAGAGGTACAAGGCTTCGTCTCATCTGCTGTCTGAGCATCCAGGCCCAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR CCA 90 bp GGCAGAAGGGACCCTGAGGACATTAATAAATATGGACGGGCGGTCCCTGGAGGCGGTAGGGGCCTTTATTaGCCAGCACACATCTACCTC +
Preference number: 4 (lower is better)
Translates to: GRRDPEDINKYGRAVPGGGRGLY*PAHIYL
Trigger: GAGGTAGATGTGTGCTGGCCAATAAAGGCCCCTACC...GCCTCCAGGGACCGCCCGTCCATATTTATTAATGTCCTCAGGGTCCCTTCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR TCA 90 bp CCTTTGGGCCTGGATGCTCAGACAGCAGATGAGACGAAGCCTTGTACCTCTATCATTCTGCACATGGCATaGGATGGTGCGGGTCACCAC +
Preference number: 4 (lower is better)
Translates to: PLGLDAQTADETKPCTSIILHMA*DGAGHH
Trigger: GTGGTGACCCGCACCATCTCATGCCATGTGCAGAAT...GATAGAGGTACAAGGCTTCGTCTCATCTGCTGTCTGAGCATCCAGGCCCAAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR TCA 90 bp AGGGACCCTGAGGACATTAATAAATATGGACGGGCGGTCCCTGGAGGCAGCTGGACACTTTGCTGCAGTTaGGACAACCTGAGAAGGCTG +
Preference number: 4 (lower is better)
Translates to: RDPEDINKYGRAVPGGSWTLCCS*DNLRRL
Trigger: CAGCCTTCTCAGGTTGTCTCAACTGCAGCAAAGTGT...CCAGCTGCCTCCAGGGACCGCCCGTCCATATTTATTAATGTCCTCAGGGTCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR TCA 90 bp GCACACATCTACCTCCTGGCATCTGTCACAAGCATTTGCAGGAGTAGGCGGCCCGGTTGTTGGTCTCAGTaGAGGTGTTGGACAGCAATG +
Preference number: 4 (lower is better)
Translates to: AHIYLLASVTSICRSRRPGCWSQ*RCWTAM
Trigger: CATTGCTGTCCAACACCTTCACTGAGACCAACAACC...GGGCCGCCTACTCCTGCAAATGCTTGTGACAGATGCCAGGAGGTAGATGTGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR GCA 90 bp ACATCTACCTCCTGGCATCTGTCACAAGCATTTGCAGGAGTAGGCGGCCCCTTCCTCGCTGAAGGTAGGTaGCATTCTGCACATGGCATG +
Preference number: 4 (lower is better)
Translates to: TSTSWHLSQAFAGVGGPFLAEGR*HSAHGM
Trigger: CATGCCATGTGCAGAATGGCACCTACCTTCAGCGAG...GAAGGGGCCGCCTACTCCTGCAAATGCTTGTGACAGATGCCAGGAGGTAGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR GCA 90 bp GGCAGAAGGGACCCTGAGGACATTAATAAATATGGACGGGCGGTCCCTGGAGGCGTTGGAGGTACTGGCTaGTCTATGACAGTCAGCATG +
Preference number: 4 (lower is better)
Translates to: GRRDPEDINKYGRAVPGGVGGTG*SMTVSM
Trigger: CATGCTGACTGTCATAGAGCAGCCAGTACCTCCAAC...GCCTCCAGGGACCGCCCGTCCATATTTATTAATGTCCTCAGGGTCCCTTCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR CCA 90 bp CCTTTGGGCCTGGATGCTCAGACAGCAGATGAGACGAAGCCTTGTACCTCTATCGCACATGGCATGAGATaGTGCGGGTCACCACATAGG +
Preference number: 4 (lower is better)
Translates to: PLGLDAQTADETKPCTSIAHGMR*CGSPHR
Trigger: CCTATGTGGTGACCCGCACCATCTCATGCCATGTGC...GATAGAGGTACAAGGCTTCGTCTCATCTGCTGTCTGAGCATCCAGGCCCAAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR CCA 90 bp CCTTTGGGCCTGGATGCTCAGACAGCAGATGAGACGAAGCCTTGTACCTCTATCTCAGCATGGTCATCTTaGCCTCCAGCACCTTCAGCC +
Preference number: 4 (lower is better)
Translates to: PLGLDAQTADETKPCTSISAWSS*PPAPSA
Trigger: GGCTGAAGGTGCTGGAGGCCAAGATGACCATGCTGA...GATAGAGGTACAAGGCTTCGTCTCATCTGCTGTCTGAGCATCCAGGCCCAAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR CCA 90 bp GCACACATCTACCTCCTGGCATCTGTCACAAGCATTTGCAGGAGTAGGCGGCCCTGGTGTTGGAGGTACTaGCTGCTCTATGACAGTCAG +
Preference number: 4 (lower is better)
Translates to: AHIYLLASVTSICRSRRPWCWRY*LLYDSQ
Trigger: CTGACTGTCATAGAGCAGCCAGTACCTCCAACACCA...GGGCCGCCTACTCCTGCAAATGCTTGTGACAGATGCCAGGAGGTAGATGTGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR CCA 90 bp AGGGACCCTGAGGACATTAATAAATATGGACGGGCGGTCCCTGGAGGCAGCTGGTGGTGTTGGAGGTACTaGCTGCTCTATGACAGTCAG +
Preference number: 4 (lower is better)
Translates to: RDPEDINKYGRAVPGGSWWCWRY*LLYDSQ
Trigger: CTGACTGTCATAGAGCAGCCAGTACCTCCAACACCA...CCAGCTGCCTCCAGGGACCGCCCGTCCATATTTATTAATGTCCTCAGGGTCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR CCA 90 bp CCTTTGGGCCTGGATGCTCAGACAGCAGATGAGACGAAGCCTTGTACCTCTATCCTCGCCCTTCTCTCCTaGGTGGCCAGAGATTCCTTT +
Preference number: 4 (lower is better)
Translates to: PLGLDAQTADETKPCTSILALLS*VARDSF
Trigger: AAAGGAATCTCTGGCCACCCAGGAGAGAAGGGCGAG...GATAGAGGTACAAGGCTTCGTCTCATCTGCTGTCTGAGCATCCAGGCCCAAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334018.11
ENST00000404820.7
CDS-3UTR TCA 90 bp CCTTTGGGCCTGGATGCTCAGACAGCAGATGAGACGAAGCCTTGTACCTCTATCTGCTCAGACAGCAGATaGGACGAAGCCTTGTACCTC +
Preference number: 4 (lower is better)
Translates to: PLGLDAQTADETKPCTSICSDSR*DEALYL
Trigger: GAGGTACAAGGCTTCGTCTCATCTGCTGTCTGAGCA...GATAGAGGTACAAGGCTTCGTCTCATCTGCTGTCTGAGCATCCAGGCCCAAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR GCA 90 bp CCTTTGGGCCTGGATGCTCAGACAGCAGATGAGACGAAGCCTTGTACCTCTATCCTCGCTGAAGGTAGGTaGCATTCTGCACATGGCATG +
Preference number: 4 (lower is better)
Translates to: PLGLDAQTADETKPCTSILAEGR*HSAHGM
Trigger: CATGCCATGTGCAGAATGGCACCTACCTTCAGCGAG...GATAGAGGTACAAGGCTTCGTCTCATCTGCTGTCTGAGCATCCAGGCCCAAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR GCA 90 bp ACATCTACCTCCTGGCATCTGTCACAAGCATTTGCAGGAGTAGGCGGCCCCTTCGTTGGAGGTACTGGCTaGTCTATGACAGTCAGCATG +
Preference number: 4 (lower is better)
Translates to: TSTSWHLSQAFAGVGGPFVGGTG*SMTVSM
Trigger: CATGCTGACTGTCATAGAGCAGCCAGTACCTCCAAC...GAAGGGGCCGCCTACTCCTGCAAATGCTTGTGACAGATGCCAGGAGGTAGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR CCA 90 bp TTGCTCAGCCTCAGACATGTGCATGGTGCCAGGACTGAGACCTGCTTACCCCTATGGTGTTGGAGGTACTaGCTGCTCTATGACAGTCAG +
Preference number: 4 (lower is better)
Translates to: LLSLRHVHGARTETCLPLWCWRY*LLYDSQ
Trigger: CTGACTGTCATAGAGCAGCCAGTACCTCCAACACCA...TAGGGGTAAGCAGGTCTCAGTCCTGGCACCATGCACATGTCTGAGGCTGAGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR CCA 90 bp CCTTGCTCAGCCTCAGACATGTGCATGGTGCCAGGACTGAGACCTGCTTACCCCCACACATCTACCTCCTaGCATCTGTCACAAGCATTT +
Preference number: 4 (lower is better)
Translates to: PCSASDMCMVPGLRPAYPHTSTS*HLSQAF
Trigger: AAATGCTTGTGACAGATGCCAGGAGGTAGATGTGTG...GGGGTAAGCAGGTCTCAGTCCTGGCACCATGCACATGTCTGAGGCTGAGCAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR CCA 90 bp CCTTTGGGCCTGGATGCTCAGACAGCAGATGAGACGAAGCCTTGTACCTCTATCGGTAGGGGCCTTTATTaGCCAGCACACATCTACCTC +
Preference number: 4 (lower is better)
Translates to: PLGLDAQTADETKPCTSIGRGLY*PAHIYL
Trigger: GAGGTAGATGTGTGCTGGCCAATAAAGGCCCCTACC...GATAGAGGTACAAGGCTTCGTCTCATCTGCTGTCTGAGCATCCAGGCCCAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR CCA 90 bp AGGGACCCTGAGGACATTAATAAATATGGACGGGCGGTCCCTGGAGGCAGCTGGACATCACCTTGTATGTaGGTCTCACCACAGTTCTGT +
Preference number: 4 (lower is better)
Translates to: RDPEDINKYGRAVPGGSWTSPCM*VSPQFC
Trigger: ACAGAACTGTGGTGAGACCCACATACAAGGTGATGT...CCAGCTGCCTCCAGGGACCGCCCGTCCATATTTATTAATGTCCTCAGGGTCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR CCA 90 bp GGCAGAAGGGACCCTGAGGACATTAATAAATATGGACGGGCGGTCCCTGGAGGCACATCACCTTGTATGTaGGTCTCACCACAGTTCTGT +
Preference number: 4 (lower is better)
Translates to: GRRDPEDINKYGRAVPGGTSPCM*VSPQFC
Trigger: ACAGAACTGTGGTGAGACCCACATACAAGGTGATGT...GCCTCCAGGGACCGCCCGTCCATATTTATTAATGTCCTCAGGGTCCCTTCTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR CCA 90 bp GGCAGAAGGGACCCTGAGGACATTAATAAATATGGACGGGCGGTCCCTGGAGGCCACACATCTACCTCCTaGCATCTGTCACAAGCATTT +
Preference number: 4 (lower is better)
Translates to: GRRDPEDINKYGRAVPGGHTSTS*HLSQAF
Trigger: AAATGCTTGTGACAGATGCCAGGAGGTAGATGTGTG...GCCTCCAGGGACCGCCCGTCCATATTTATTAATGTCCTCAGGGTCCCTTCTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR CAA 90 bp TGGGGCCGGTGGGCCCGGGAAGCCCCCAAGCACCGACTTGGTCCTGGAGGCCTCCTGCCGGCATCTCCCTaGGGGCCGGTGGGCCCGGGA +
Preference number: 5 (lower is better)
Translates to: WGRWAREAPKHRLGPGGLLPASP*GPVGPG
Trigger: TCCCGGGCCCACCGGCCCCAAGGGAGATGCCGGCAG...GAGGCCTCCAGGACCAAGTCGGTGCTTGGGGGCTTCCCGGGCCCACCGGCCCCA
76% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000435427.5
CDS-3UTR CAA 90 bp CCATTGGGCCCCGACTGCCGGCATCTCCCTTGGGGCCGGTGGGCCCGGGAAGCCGGCCTCTCATCCCCATaGGGCCCCGACTGCCGGCAT +
Preference number: 5 (lower is better)
Translates to: PLGPDCRHLPWGRWAREAGLSSP*GPDCRH
Trigger: ATGCCGGCAGTCGGGGCCCAATGGGGATGAGAGGCC...GGCTTCCCGGGCCCACCGGCCCCAAGGGAGATGCCGGCAGTCGGGGCCCAATGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000435427.5
CDS GCA 90 bp CATAGGAGCACCAGTTCCTGCGTCCGGAGAACGGAGCTGCCCCGATaGTCCACGCAGCGCCGCCTCCCGGGAGCAGGAGCCCGAGGCAGA +
Preference number: 5 (lower is better)
Translates to: HRSTSSCVRRTELPR*STQRRLPGAGARGR
Trigger: TCTGCCTCGGGCTCCTGCTCCCGGGAGGCGGCGCTGCGTGGAGCATCGGGGCAGCTCCGTTCTCCGGACGCAGGAACTGGTGCTCCTATG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
ENST00000429226.5
ENST00000430127.1
CDS GCA 90 bp ACAGTCAGCATGGTCATCTGCGTCCGGAGAACGGAGCTGCCCCGATaGTCCACGCAGCGCCGCCTCCCGGGAGCAGGAGCCCGAGGCAGA +
Preference number: 5 (lower is better)
Translates to: TVSMVICVRRTELPR*STQRRLPGAGARGR
Trigger: TCTGCCTCGGGCTCCTGCTCCCGGGAGGCGGCGCTGCGTGGAGCATCGGGGCAGCTCCGTTCTCCGGACGCAGATGACCATGCTGACTGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435427.5
CDS CCA 90 bp GGCGCTCCACACTCTGACCCCTGGCAGCCCATGGGCAGGTCAGGCTaGGCTGCCAAAGGGAAGAAGCCAAGGACGCACGTCAGGGCCTGG +
Preference number: 5 (lower is better)
Translates to: GAPHSDPWQPMGRSG*AAKGKKPRTHVRAW
Trigger: CCAGGCCCTGACGTGCGTCCTTGGCTTCTTCCCTTTGGCAGCCCAGCCTGACCTGCCCATGGGCTGCCAGGGGTCAGAGTGTGGAGCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473933.1
CDS GCA 90 bp GGTAGCGGGCACTGTGCTGATGGCTACTCCACCCCCACCTCCACCTaGTGGGATCCCAGGGGGACTCACCATGCTGGGAGATCCGGGCAT +
Preference number: 5 (lower is better)
Translates to: GSGHCADGYSTPTST*WDPRGTHHAGRSGH
Trigger: ATGCCCGGATCTCCCAGCATGGTGAGTCCCCCTGGGATCCCAGCAGGTGGAGGTGGGGGTGGAGTAGCCATCAGCACAGTGCCCGCTACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000473933.1
CDS-3UTR CAA 90 bp GGCAGAAGGGACCCTGAGGACATTAATAAATATGGACGGGCGGTCCCTGGAGGCCTGCCGGCATCTCCCTaGGGGCCGGTGGGCCCGGGA +
Preference number: 5 (lower is better)
Translates to: GRRDPEDINKYGRAVPGGLPASP*GPVGPG
Trigger: TCCCGGGCCCACCGGCCCCAAGGGAGATGCCGGCAG...GCCTCCAGGGACCGCCCGTCCATATTTATTAATGTCCTCAGGGTCCCTTCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS TCA 90 bp GGACAACGGCGCCTGCTGGAGGACTGGGTCACATGTGGCCTATCGTaGGCAGGGCTGGCACACAGAAGGCACGTGGCAGATGGTAGCGGG +
Preference number: 5 (lower is better)
Translates to: GQRRLLEDWVTCGLS*AGLAHRRHVADGSG
Trigger: CCCGCTACCATCTGCCACGTGCCTTCTGTGTGCCAGCCCTGCTCACGATAGGCCACATGTGACCCAGTCCTCCAGCAGGCGCCGTTGTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473933.1
CDS GCA 90 bp GCCCTATGGGGCAGCCTGCAGCATGGCTGGTACCACCTGGGCACCTaGTCCAGGGTGAGGAGTGTGGAGAGTGTTGGTCCCGCAAGACCA +
Preference number: 5 (lower is better)
Translates to: ALWGSLQHGWYHLGT*SRVRSVESVGPARP
Trigger: TGGTCTTGCGGGACCAACACTCTCCACACTCCTCACCCTGGAGCAGGTGCCCAGGTGGTACCAGCCATGCTGCAGGCTGCCCCATAGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473933.1
CDS GCA 90 bp CCAGGTCTGACCACAGCAGCAGGGCCCGGGTTTCTAGGGCACCCCTaGACCCGTGGAGGAGGGAACCAGTCATTGAGGGAAGGGTGGTTG +
Preference number: 5 (lower is better)
Translates to: PGLTTAAGPGFLGHP*TRGGGNQSLREGWL
Trigger: CAACCACCCTTCCCTCAATGACTGGTTCCCTCCTCCACGGGTGCAGGGGTGCCCTAGAAACCCGGGCCCTGCTGCTGTGGTCAGACCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487477.1
CDS CCA 90 bp CTGTGGGCCGAAGCGCCATCCGCCGCATGGTACTGCCCGACCACATaGGCTCCAAGGAGGCAGAGGAAGCTGCAACTTCCTCGCAGCTCA +
Preference number: 5 (lower is better)
Translates to: LWAEAPSAAWYCPTT*APRRQRKLQLPRSS
Trigger: TGAGCTGCGAGGAAGTTGCAGCTTCCTCTGCCTCCTTGGAGCCCATGTGGTCGGGCAGTACCATGCGGCGGATGGCGCTTCGGCCCACAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
ENST00000429226.5
ENST00000484039.5
CDS CCA 90 bp GACCACAGCAGCAGGGCCCGGGTTTCTAGGGCACCCCTGCACCCGTaGAGGAGGGAACCAGTCATTGAGGGAAGGGTGGTTGTGGCCTCT +
Preference number: 5 (lower is better)
Translates to: DHSSRARVSRAPLHP*RREPVIEGRVVVAS
Trigger: AGAGGCCACAACCACCCTTCCCTCAATGACTGGTTCCCTCCTCCACGGGTGCAGGGGTGCCCTAGAAACCCGGGCCCTGCTGCTGTGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487477.1
CDS-3UTR CAA 90 bp ACATCTACCTCCTGGCATCTGTCACAAGCATTTGCAGGAGTAGGCGGCCCCTTCCTGCCGGCATCTCCCTaGGGGCCGGTGGGCCCGGGA +
Preference number: 5 (lower is better)
Translates to: TSTSWHLSQAFAGVGGPFLPASP*GPVGPG
Trigger: TCCCGGGCCCACCGGCCCCAAGGGAGATGCCGGCAG...GAAGGGGCCGCCTACTCCTGCAAATGCTTGTGACAGATGCCAGGAGGTAGATGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR CAA 90 bp CCTTGCTCAGCCTCAGACATGTGCATGGTGCCAGGACTGAGACCTGCTTACCCCGCATGTCCGCCCCTCTaGCCCCGAAGGAGGCTGGGG +
Preference number: 5 (lower is better)
Translates to: PCSASDMCMVPGLRPAYPACPPL*PRRRLG
Trigger: CCCCAGCCTCCTTCGGGGCAAGAGGGGCGGACATGC...GGGGTAAGCAGGTCTCAGTCCTGGCACCATGCACATGTCTGAGGCTGAGCAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR CAA 90 bp GAAGACTGCCCCCTGCCCTGTCATCTCTGCATGTGCCGAGCCCCAGCTCCTGACGATCCAGTCAGAGGATaGGGCAGCCTGACCTCGGGG +
Preference number: 5 (lower is better)
Translates to: EDCPLPCHLCMCRAPAPDDPVRG*GSLTSG
Trigger: CCCCGAGGTCAGGCTGCCCAATCCTCTGACTGGATC...GTCAGGAGCTGGGGCTCGGCACATGCAGAGATGACAGGGCAGGGGGCAGTCTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS TCA 90 bp CTTCATGGAGCCCAGGCGTGGGCAGGGCACTCCGTGGTGGGGTGCTaGGTGAAGAGGCAAGTAGATGAAAGGGCCCAGGTCATCCTGGCC +
Preference number: 5 (lower is better)
Translates to: LHGAQAWAGHSVVGC*VKRQVDERAQVILA
Trigger: GGCCAGGATGACCTGGGCCCTTTCATCTACTTGCCTCTTCACTCAGCACCCCACCACGGAGTGCCCTGCCCACGCCTGGGCTCCATGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473933.1
CDS GCA 90 bp AGGAGGGGCCGGGCCTGTGGCCTTGGGAGTTCAGGACTCACTTCCTaGCGCCGGGTCTTTTGCGTCCCAGTGTTCCGAGAACTGGATTCC +
Preference number: 5 (lower is better)
Translates to: RRGRACGLGSSGLTS*RRVFCVPVFRELDS
Trigger: GGAATCCAGTTCTCGGAACACTGGGACGCAAAAGACCCGGCGGCAGGAAGTGAGTCCTGAACTCCCAAGGCCACAGGCCCGGCCCCTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473933.1
CDS CCA 90 bp GCCTGCTGGAGGACTGGGTCACATGTGGCCTATCGTGAGCAGGGCTaGCACACAGAAGGCACGTGGCAGATGGTAGCGGGCACTGTGCTG +
Preference number: 5 (lower is better)
Translates to: ACWRTGSHVAYREQG*HTEGTWQMVAGTVL
Trigger: CAGCACAGTGCCCGCTACCATCTGCCACGTGCCTTCTGTGTGCCAGCCCTGCTCACGATAGGCCACATGTGACCCAGTCCTCCAGCAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473933.1
CDS CCA 90 bp AAGGCTTGGGAGGGCCTGATGCCCGGTGGCTCTAAGCACAGGTTCTaGAGGCAGCCTGGGTTTGAAGCCGTTCCCCTACGCCCAGGCTGT +
Preference number: 5 (lower is better)
Translates to: KAWEGLMPGGSKHRF*RQPGFEAVPLRPGC
Trigger: ACAGCCTGGGCGTAGGGGAACGGCTTCAAACCCAGGCTGCCTCCAGAACCTGTGCTTAGAGCCACCGGGCATCAGGCCCTCCCAAGCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473933.1
CDS CCA 90 bp GCCAAGACAGCTTGGACTGCCCTATGGGGCAGCCTGCAGCATGGCTaGTACCACCTGGGCACCTGCTCCAGGGTGAGGAGTGTGGAGAGT +
Preference number: 5 (lower is better)
Translates to: AKTAWTALWGSLQHG*YHLGTCSRVRSVES
Trigger: ACTCTCCACACTCCTCACCCTGGAGCAGGTGCCCAGGTGGTACCAGCCATGCTGCAGGCTGCCCCATAGGGCAGTCCAAGCTGTCTTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473933.1
CDS CCA 90 bp CTCTGCCAAGACAGCTTGGACTGCCCTATGGGGCAGCCTGCAGCATaGCTGGTACCACCTGGGCACCTGCTCCAGGGTGAGGAGTGTGGA +
Preference number: 5 (lower is better)
Translates to: LCQDSLDCPMGQPAA*LVPPGHLLQGEECG
Trigger: TCCACACTCCTCACCCTGGAGCAGGTGCCCAGGTGGTACCAGCCATGCTGCAGGCTGCCCCATAGGGCAGTCCAAGCTGTCTTGGCAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473933.1
CDS CCA 90 bp CACCCCTGCACCCGTGGAGGAGGGAACCAGTCATTGAGGGAAGGGTaGTTGTGGCCTCTCAGGTCCATGCTTGCCTGGGGCAGGCACCTT +
Preference number: 5 (lower is better)
Translates to: HPCTRGGGNQSLREG*LWPLRSMLAWGRHL
Trigger: AAGGTGCCTGCCCCAGGCAAGCATGGACCTGAGAGGCCACAACCACCCTTCCCTCAATGACTGGTTCCCTCCTCCACGGGTGCAGGGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487477.1
CDS CCA 90 bp CTTCAGTCTCTGAGAAGGCTGTGGGCCGAAGCGCCATCCGCCGCATaGTACTGCCCGACCACATGGGCTCCAAGGAGGCAGAGGAAGCTG +
Preference number: 5 (lower is better)
Translates to: LQSLRRLWAEAPSAA*YCPTTWAPRRQRKL
Trigger: CAGCTTCCTCTGCCTCCTTGGAGCCCATGTGGTCGGGCAGTACCATGCGGCGGATGGCGCTTCGGCCCACAGCCTTCTCAGAGACTGAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484039.5
CDS-3UTR CAA 90 bp CAGAGGGAAGAACTGAGGCAAGAAGCCCCCGGTGATCCAGTCAGAGGATTGGGCGGCCTCTCATCCCCATaGGGCCCCGACTGCCGGCAT +
Preference number: 5 (lower is better)
Translates to: QREELRQEAPGDPVRGLGGLSSP*GPDCRH
Trigger: ATGCCGGCAGTCGGGGCCCAATGGGGATGAGAGGCC...GCCCAATCCTCTGACTGGATCACCGGGGGCTTCTTGCCTCAGTTCTTCCCTCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR CAA 90 bp GAAGACTGCCCCCTGCCCTGTCATCTCTGCATGTGCCGAGCCCCAGCTCCTGACCCCTGGGGCCAGTGGTaGTTGGTCTCAGTGAAGGTG +
Preference number: 5 (lower is better)
Translates to: EDCPLPCHLCMCRAPAPDPWGQW*LVSVKV
Trigger: CACCTTCACTGAGACCAACAACCACTGGCCCCAGGG...GTCAGGAGCTGGGGCTCGGCACATGCAGAGATGACAGGGCAGGGGGCAGTCTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR CAA 90 bp GGCAGAAGGGACCCTGAGGACATTAATAAATATGGACGGGCGGTCCCTGGAGGCGCATGTCCGCCCCTCTaGCCCCGAAGGAGGCTGGGG +
Preference number: 5 (lower is better)
Translates to: GRRDPEDINKYGRAVPGGACPPL*PRRRLG
Trigger: CCCCAGCCTCCTTCGGGGCAAGAGGGGCGGACATGC...GCCTCCAGGGACCGCCCGTCCATATTTATTAATGTCCTCAGGGTCCCTTCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS TCA 90 bp CTGGAGGCCCAGTGGGTCCCTGGGGCCAGTGGTTGTTGGTCTCAGTaGAGGTGTTGGACAGCAATGGGTCTCCATGCTGGGAGATCCGGG +
Preference number: 5 (lower is better)
Translates to: LEAQWVPGASGCWSQ*RCWTAMGLHAGRSG
Trigger: CCCGGATCTCCCAGCATGGAGACCCATTGCTGTCCAACACCTTCACTGAGACCAACAACCACTGGCCCCAGGGACCCACTGGGCCTCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
ENST00000433143.1
ENST00000484039.5
ENST00000488820.6
CDS TCA 90 bp GGCAGGGCACTCCGTGGTGGGGTGCTGAGTGAAGAGGCAAGTAGATaGAAGGGCCCAGGTCATCCTGGCCATGTCAGGAGCAGGGAAGGG +
Preference number: 5 (lower is better)
Translates to: GRALRGGVLSEEASR*KGPGHPGHVRSREG
Trigger: CCCTTCCCTGCTCCTGACATGGCCAGGATGACCTGGGCCCTTTCATCTACTTGCCTCTTCACTCAGCACCCCACCACGGAGTGCCCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473933.1
CDS TCA 90 bp CTCTCTGCCAGGCACCATTTGCTGGCTGGCTGGCTGGATGAAGAATaGGTGTCCGCTGGCCTGGGCCAAGCATCGGAAGGCGCCTTCTGC +
Preference number: 5 (lower is better)
Translates to: LSARHHLLAGWLDEE*VSAGLGQASEGAFC
Trigger: GCAGAAGGCGCCTTCCGATGCTTGGCCCAGGCCAGCGGACACTCATTCTTCATCCAGCCAGCCAGCCAGCAAATGGTGCCTGGCAGAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488820.6
CDS TCA 90 bp GAGCCTTCTCTCTGCCAGGCACCATTTGCTGGCTGGCTGGCTGGATaGAGAATGAGTGTCCGCTGGCCTGGGCCAAGCATCGGAAGGCGC +
Preference number: 5 (lower is better)
Translates to: EPSLCQAPFAGWLAG*RMSVRWPGPSIGRR
Trigger: GCGCCTTCCGATGCTTGGCCCAGGCCAGCGGACACTCATTCTTCATCCAGCCAGCCAGCCAGCAAATGGTGCCTGGCAGAGAGAAGGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488820.6
CDS GCA 90 bp AACCTGAGAAGGCTGTGGGCCGAAGCGCCATCCGCCGCATGGTACTaGCCGACCACATGGGCTCCAAGGAGGCAGAGGAAGCTGCAACTT +
Preference number: 5 (lower is better)
Translates to: NLRRLWAEAPSAAWY*PTTWAPRRQRKLQL
Trigger: AAGTTGCAGCTTCCTCTGCCTCCTTGGAGCCCATGTGGTCGGGCAGTACCATGCGGCGGATGGCGCTTCGGCCCACAGCCTTCTCAGGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
ENST00000429226.5
CDS GCA 90 bp GGGTGGTTAGTCTTCACCTGCCACCTCTGCCAAGACAGCTTGGACTaGCCTATGGGGCAGCCTGCAGCATGGCTGGTACCACCTGGGCAC +
Preference number: 5 (lower is better)
Translates to: GWLVFTCHLCQDSLD*PMGQPAAWLVPPGH
Trigger: GTGCCCAGGTGGTACCAGCCATGCTGCAGGCTGCCCCATAGGGCAGTCCAAGCTGTCTTGGCAGAGGTGGCAGGTGAAGACTAACCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473933.1
CDS GCA 90 bp TCTCTGAGAAGGCTGTGGGCCGAAGCGCCATCCGCCGCATGGTACTaGCCGACCACATGGGCTCCAAGGAGGCAGAGGAAGCTGCAACTT +
Preference number: 5 (lower is better)
Translates to: SLRRLWAEAPSAAWY*PTTWAPRRQRKLQL
Trigger: AAGTTGCAGCTTCCTCTGCCTCCTTGGAGCCCATGTGGTCGGGCAGTACCATGCGGCGGATGGCGCTTCGGCCCACAGCCTTCTCAGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484039.5
CDS CCA 90 bp AACCACAGGAGGACAACGGCGCCTGCTGGAGGACTGGGTCACATGTaGCCTATCGTGAGCAGGGCTGGCACACAGAAGGCACGTGGCAGA +
Preference number: 5 (lower is better)
Translates to: NHRRTTAPAGGLGHM*PIVSRAGTQKARGR
Trigger: TCTGCCACGTGCCTTCTGTGTGCCAGCCCTGCTCACGATAGGCCACATGTGACCCAGTCCTCCAGCAGGCGCCGTTGTCCTCCTGTGGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473933.1
CDS CCA 90 bp ACAGTGGAGAAGAGGCTGAAACCTGGCGCTCCACACTCTGACCCCTaGCAGCCCATGGGCAGGTCAGGCTGGGCTGCCAAAGGGAAGAAG +
Preference number: 5 (lower is better)
Translates to: TVEKRLKPGAPHSDP*QPMGRSGWAAKGKK
Trigger: CTTCTTCCCTTTGGCAGCCCAGCCTGACCTGCCCATGGGCTGCCAGGGGTCAGAGTGTGGAGCGCCAGGTTTCAGCCTCTTCTCCACTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473933.1
CDS-3UTR CAA 90 bp CCTGAGGACATTAATAAATATGGACGGGCGGTCCCTGGAGGCAGCTGGCCGAGTGGCCTCTCATCCCCATaGGGCCCCGACTGCCGGCAT +
Preference number: 5 (lower is better)
Translates to: PEDINKYGRAVPGGSWPSGLSSP*GPDCRH
Trigger: ATGCCGGCAGTCGGGGCCCAATGGGGATGAGAGGCC...ACTCGGCCAGCTGCCTCCAGGGACCGCCCGTCCATATTTATTAATGTCCTCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR CAA 90 bp CACACATCTACCTCCTGGCATCTGTCACAAGCATTTGCAGGAGTAGGCGGCCCCGGCCTCTCATCCCCATaGGGCCCCGACTGCCGGCAT +
Preference number: 5 (lower is better)
Translates to: HTSTSWHLSQAFAGVGGPGLSSP*GPDCRH
Trigger: ATGCCGGCAGTCGGGGCCCAATGGGGATGAGAGGCC...GGGGCCGCCTACTCCTGCAAATGCTTGTGACAGATGCCAGGAGGTAGATGTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR CAA 90 bp ATCTACCTCCTGGCATCTGTCACAAGCATTTGCAGGAGTAGGCGGCCCCTTCCTGCATGTCCGCCCCTCTaGCCCCGAAGGAGGCTGGGG +
Preference number: 5 (lower is better)
Translates to: IYLLASVTSICRSRRPLPACPPL*PRRRLG
Trigger: CCCCAGCCTCCTTCGGGGCAAGAGGGGCGGACATGC...AGGAAGGGGCCGCCTACTCCTGCAAATGCTTGTGACAGATGCCAGGAGGTAGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS TCA 90 bp CCTGCTCCCAGCAGCATGGAAGCTCCAGAAGGGCAGGGACATGTCTaGCCCCACCCAGTGCCCAGCTCAGAGCCTGATAAGTGTAGGTGC +
Preference number: 5 (lower is better)
Translates to: PAPSSMEAPEGQGHV*PHPVPSSEPDKCRC
Trigger: GCACCTACACTTATCAGGCTCTGAGCTGGGCACTGGGTGGGGTCAGACATGTCCCTGCCCTTCTGGAGCTTCCATGCTGCTGGGAGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473933.1
CDS TCA 90 bp CCCGGAGTCCACAGGCCTAGGCTGCCTGGTAGTCTAACAGGGGGATaGGCACAGCACCTAGTTCTCCACCTCGTCCAGGCTGAGTCTTCC +
Preference number: 5 (lower is better)
Translates to: PGVHRPRLPGSLTGG*AQHLVLHLVQAESS
Trigger: GGAAGACTCAGCCTGGACGAGGTGGAGAACTAGGTGCTGTGCTCATCCCCCTGTTAGACTACCAGGCAGCCTAGGCCTGTGGACTCCGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473933.1
CDS TCA 90 bp GTTCCGAGAACTGGATTCCAGCCAGTTCCAAGGCTTGGGAGGGCCTaGTGCCCGGTGGCTCTAAGCACAGGTTCTGGAGGCAGCCTGGGT +
Preference number: 5 (lower is better)
Translates to: VPRTGFQPVPRLGRA*CPVALSTGSGGSLG
Trigger: ACCCAGGCTGCCTCCAGAACCTGTGCTTAGAGCCACCGGGCATCAGGCCCTCCCAAGCCTTGGAACTGGCTGGAATCCAGTTCTCGGAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473933.1
CDS GCA 90 bp AGCGGGGCAGGGTCCTCAGGGGTAGCTGGTGTTGGAGGTACTGGCTaGTCTATGACAGTCAGCATGGTCATCTGCGTCCGGAGAACGGAG +
Preference number: 5 (lower is better)
Translates to: SGAGSSGVAGVGGTG*SMTVSMVICVRRTE
Trigger: CTCCGTTCTCCGGACGCAGATGACCATGCTGACTGTCATAGAGCAGCCAGTACCTCCAACACCAGCTACCCCTGAGGACCCTGCCCCGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435427.5
CDS CCA 90 bp CCAGAGCGGGGCAGGGTCCTCAGGGGTAGCTGGTGTTGGAGGTACTaGCTGCTCTATGACAGTCAGCATGGTCATCTTGGCCTCCAGCAC +
Preference number: 5 (lower is better)
Translates to: PERGRVLRGSWCWRY*LLYDSQHGHLGLQH
Trigger: GTGCTGGAGGCCAAGATGACCATGCTGACTGTCATAGAGCAGCCAGTACCTCCAACACCAGCTACCCCTGAGGACCCTGCCCCGCTCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
ENST00000429226.5
ENST00000430127.1
ENST00000484039.5
CDS CCA 90 bp TCACATGTGGCCTATCGTGAGCAGGGCTGGCACACAGAAGGCACGTaGCAGATGGTAGCGGGCACTGTGCTGATGGCTACTCCACCCCCA +
Preference number: 5 (lower is better)
Translates to: SHVAYREQGWHTEGT*QMVAGTVLMATPPP
Trigger: TGGGGGTGGAGTAGCCATCAGCACAGTGCCCGCTACCATCTGCCACGTGCCTTCTGTGTGCCAGCCCTGCTCACGATAGGCCACATGTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473933.1
CDS CCA 90 bp TCACTTCCTGCCGCCGGGTCTTTTGCGTCCCAGTGTTCCGAGAACTaGATTCCAGCCAGTTCCAAGGCTTGGGAGGGCCTGATGCCCGGT +
Preference number: 5 (lower is better)
Translates to: SLPAAGSFASQCSEN*IPASSKAWEGLMPG
Trigger: ACCGGGCATCAGGCCCTCCCAAGCCTTGGAACTGGCTGGAATCCAGTTCTCGGAACACTGGGACGCAAAAGACCCGGCGGCAGGAAGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473933.1
CDS-3UTR CAA 90 bp CAGAGGGAAGAACTGAGGCAAGAAGCCCCCGGTGATCCAGTCAGAGGATTGGGCTGGCCAGAGATTCCTTaGGGTCCAGTGGGGCCTGGG +
Preference number: 5 (lower is better)
Translates to: QREELRQEAPGDPVRGLGWPEIP*GPVGPG
Trigger: CCCAGGCCCCACTGGACCCAAAGGAATCTCTGGCCA...GCCCAATCCTCTGACTGGATCACCGGGGGCTTCTTGCCTCAGTTCTTCCCTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334018.11
ENST00000404820.7
CDS GCA 90 bp AGCGGGGCAGGGTCCTCAGGGGTAGCTGGTGTTGGAGGTACTGGCTaGTCTATGACAGTCAGCATGGTCATCTTGGCCTCCAGCACCTTC +
Preference number: 5 (lower is better)
Translates to: SGAGSSGVAGVGGTG*SMTVSMVILASSTF
Trigger: GAAGGTGCTGGAGGCCAAGATGACCATGCTGACTGTCATAGAGCAGCCAGTACCTCCAACACCAGCTACCCCTGAGGACCCTGCCCCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
ENST00000429226.5
ENST00000430127.1
ENST00000484039.5
CDS GCA 90 bp GTAGAGCTGGGTAGAGTGGGGTGGTTAGTCTTCACCTGCCACCTCTaGCAAGACAGCTTGGACTGCCCTATGGGGCAGCCTGCAGCATGG +
Preference number: 5 (lower is better)
Translates to: VELGRVGWLVFTCHL*QDSLDCPMGQPAAW
Trigger: CCATGCTGCAGGCTGCCCCATAGGGCAGTCCAAGCTGTCTTGGCAGAGGTGGCAGGTGAAGACTAACCACCCCACTCTACCCAGCTCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473933.1
CDS CCA 90 bp ACCAGAGCCTTCTCTCTGCCAGGCACCATTTGCTGGCTGGCTGGCTaGATGAAGAATGAGTGTCCGCTGGCCTGGGCCAAGCATCGGAAG +
Preference number: 5 (lower is better)
Translates to: TRAFSLPGTICWLAG*MKNECPLAWAKHRK
Trigger: CTTCCGATGCTTGGCCCAGGCCAGCGGACACTCATTCTTCATCCAGCCAGCCAGCCAGCAAATGGTGCCTGGCAGAGAGAAGGCTCTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488820.6
CDS-3UTR CAA 90 bp CCTGAGGACATTAATAAATATGGACGGGCGGTCCCTGGAGGCAGCTGGCCGAGTTGGCCAGAGATTCCTTaGGGTCCAGTGGGGCCTGGG +
Preference number: 5 (lower is better)
Translates to: PEDINKYGRAVPGGSWPSWPEIP*GPVGPG
Trigger: CCCAGGCCCCACTGGACCCAAAGGAATCTCTGGCCA...ACTCGGCCAGCTGCCTCCAGGGACCGCCCGTCCATATTTATTAATGTCCTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334018.11
ENST00000404820.7
CDS-3UTR CAA 90 bp GCACACATCTACCTCCTGGCATCTGTCACAAGCATTTGCAGGAGTAGGCGGCCCGATCCAGTCAGAGGATaGGGCAGCCTGACCTCGGGG +
Preference number: 5 (lower is better)
Translates to: AHIYLLASVTSICRSRRPDPVRG*GSLTSG
Trigger: CCCCGAGGTCAGGCTGCCCAATCCTCTGACTGGATC...GGGCCGCCTACTCCTGCAAATGCTTGTGACAGATGCCAGGAGGTAGATGTGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS GCA 90 bp AGCTCATGGGCCAGGGGCAGTTCTGCAGCACTCGCTGAAGGTAGGTaGCATTCTGCACATGGCATGAGATGGTGCGGGTCACCACATAGG +
Preference number: 5 (lower is better)
Translates to: SSWARGSSAALAEGR*HSAHGMRWCGSPHR
Trigger: CCTATGTGGTGACCCGCACCATCTCATGCCATGTGCAGAATGGCACCTACCTTCAGCGAGTGCTGCAGAACTGCCCCTGGCCCATGAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
ENST00000429226.5
ENST00000430127.1
CDS GCA 90 bp TGTGGCCTTGGGAGTTCAGGACTCACTTCCTGCCGCCGGGTCTTTTaGGTCCCAGTGTTCCGAGAACTGGATTCCAGCCAGTTCCAAGGC +
Preference number: 5 (lower is better)
Translates to: CGLGSSGLTSCRRVF*VPVFRELDSSQFQG
Trigger: GCCTTGGAACTGGCTGGAATCCAGTTCTCGGAACACTGGGACGCAAAAGACCCGGCGGCAGGAAGTGAGTCCTGAACTCCCAAGGCCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473933.1
CDS CCA 90 bp TTCACTCAAGTGACCAGAGCCTTCTCTCTGCCAGGCACCATTTGCTaGCTGGCTGGCTGGATGAAGAATGAGTGTCCGCTGGCCTGGGCC +
Preference number: 5 (lower is better)
Translates to: FTQVTRAFSLPGTIC*LAGWMKNECPLAWA
Trigger: GGCCCAGGCCAGCGGACACTCATTCTTCATCCAGCCAGCCAGCCAGCAAATGGTGCCTGGCAGAGAGAAGGCTCTGGTCACTTGAGTGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488820.6
CDS-3UTR CAA 90 bp GCACACATCTACCTCCTGGCATCTGTCACAAGCATTTGCAGGAGTAGGCGGCCCCGATCCGGTAGTTGGTaGCATGTCCGCCCCTCTTGC +
Preference number: 5 (lower is better)
Translates to: AHIYLLASVTSICRSRRPRSGSW*HVRPSC
Trigger: GCAAGAGGGGCGGACATGCAACCAACTACCGGATCG...GGGCCGCCTACTCCTGCAAATGCTTGTGACAGATGCCAGGAGGTAGATGTGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR CAA 90 bp AGGGACCCTGAGGACATTAATAAATATGGACGGGCGGTCCCTGGAGGCAGCTGGCGATCCGGTAGTTGGTaGCATGTCCGCCCCTCTTGC +
Preference number: 5 (lower is better)
Translates to: RDPEDINKYGRAVPGGSWRSGSW*HVRPSC
Trigger: GCAAGAGGGGCGGACATGCAACCAACTACCGGATCG...CCAGCTGCCTCCAGGGACCGCCCGTCCATATTTATTAATGTCCTCAGGGTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR CAA 90 bp ATCTACCTCCTGGCATCTGTCACAAGCATTTGCAGGAGTAGGCGGCCCCTTCCTGATCCAGTCAGAGGATaGGGCAGCCTGACCTCGGGG +
Preference number: 5 (lower is better)
Translates to: IYLLASVTSICRSRRPLPDPVRG*GSLTSG
Trigger: CCCCGAGGTCAGGCTGCCCAATCCTCTGACTGGATC...AGGAAGGGGCCGCCTACTCCTGCAAATGCTTGTGACAGATGCCAGGAGGTAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS TCA 90 bp AATGGTGTGCTGGGTTGTGCACCAAAAACACAGTGGAGAAGAGGCTaGAACCTGGCGCTCCACACTCTGACCCCTGGCAGCCCATGGGCA +
Preference number: 5 (lower is better)
Translates to: NGVLGCAPKTQWRRG*NLALHTLTPGSPWA
Trigger: TGCCCATGGGCTGCCAGGGGTCAGAGTGTGGAGCGCCAGGTTTCAGCCTCTTCTCCACTGTGTTTTTGGTGCACAACCCAGCACACCATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473933.1
CDS GCA 90 bp GCAGGACTGTGTCTGTCTTATCTTGTGGAGCCTGTCCCAGCAAGGTaGCTGGCACAGAGCAGGTGCGCATTCACTCAAGTGACCAGAGCC +
Preference number: 5 (lower is better)
Translates to: AGLCLSYLVEPVPAR*LAQSRCAFTQVTRA
Trigger: GGCTCTGGTCACTTGAGTGAATGCGCACCTGCTCTGTGCCAGGCACCTTGCTGGGACAGGCTCCACAAGATAAGACAGACACAGTCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488820.6
CDS-3UTR CAA 90 bp CCTGAGGACATTAATAAATATGGACGGGCGGTCCCTGGAGGCAGCTGGCCGAGTGTCAGCATGGTCATCTaGGCCTCCAGCACCTTCAGC +
Preference number: 5 (lower is better)
Translates to: PEDINKYGRAVPGGSWPSVSMVI*ASSTFS
Trigger: GCTGAAGGTGCTGGAGGCCAAGATGACCATGCTGAC...ACTCGGCCAGCTGCCTCCAGGGACCGCCCGTCCATATTTATTAATGTCCTCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR CAA 90 bp AGGGACCCTGAGGACATTAATAAATATGGACGGGCGGTCCCTGGAGGCAGCTGGGTCAGCATGGTCATCTaGGCCTCCAGCACCTTCAGC +
Preference number: 5 (lower is better)
Translates to: RDPEDINKYGRAVPGGSWVSMVI*ASSTFS
Trigger: GCTGAAGGTGCTGGAGGCCAAGATGACCATGCTGAC...CCAGCTGCCTCCAGGGACCGCCCGTCCATATTTATTAATGTCCTCAGGGTCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR CAA 90 bp ATCTACCTCCTGGCATCTGTCACAAGCATTTGCAGGAGTAGGCGGCCCCTTCCTCCCTGGGGCCAGTGGTaGTTGGTCTCAGTGAAGGTG +
Preference number: 5 (lower is better)
Translates to: IYLLASVTSICRSRRPLPPWGQW*LVSVKV
Trigger: CACCTTCACTGAGACCAACAACCACTGGCCCCAGGG...AGGAAGGGGCCGCCTACTCCTGCAAATGCTTGTGACAGATGCCAGGAGGTAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR CAA 90 bp ATCTACCTCCTGGCATCTGTCACAAGCATTTGCAGGAGTAGGCGGCCCCTTCCTCGATCCGGTAGTTGGTaGCATGTCCGCCCCTCTTGC +
Preference number: 5 (lower is better)
Translates to: IYLLASVTSICRSRRPLPRSGSW*HVRPSC
Trigger: GCAAGAGGGGCGGACATGCAACCAACTACCGGATCG...AGGAAGGGGCCGCCTACTCCTGCAAATGCTTGTGACAGATGCCAGGAGGTAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR CAA 90 bp CCTGAGGACATTAATAAATATGGACGGGCGGTCCCTGGAGGCAGCTGGCCGAGTCTCTCCTCTCAGCCCTaGCTCAGCCTCAGACATGTG +
Preference number: 5 (lower is better)
Translates to: PEDINKYGRAVPGGSWPSLSSQP*LSLRHV
Trigger: CACATGTCTGAGGCTGAGCAAGGGCTGAGAGGAGAG...ACTCGGCCAGCTGCCTCCAGGGACCGCCCGTCCATATTTATTAATGTCCTCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS CCA 90 bp CAGTGCCCAGCTCAGAGCCTGATAAGTGTAGGTGCCCAGGGAATGTaGGTCAGTGAACATAAGAGAGGACTTCATGGAGCCCAGGCGTGG +
Preference number: 5 (lower is better)
Translates to: QCPAQSLISVGAQGM*VSEHKRGLHGAQAW
Trigger: CCACGCCTGGGCTCCATGAAGTCCTCTCTTATGTTCACTGACCCACATTCCCTGGGCACCTACACTTATCAGGCTCTGAGCTGGGCACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473933.1
CDS-3UTR CAA 90 bp ATCTACCTCCTGGCATCTGTCACAAGCATTTGCAGGAGTAGGCGGCCCCTTCCTGTCAGCATGGTCATCTaGGCCTCCAGCACCTTCAGC +
Preference number: 5 (lower is better)
Translates to: IYLLASVTSICRSRRPLPVSMVI*ASSTFS
Trigger: GCTGAAGGTGCTGGAGGCCAAGATGACCATGCTGAC...AGGAAGGGGCCGCCTACTCCTGCAAATGCTTGTGACAGATGCCAGGAGGTAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR CAA 90 bp GCACACATCTACCTCCTGGCATCTGTCACAAGCATTTGCAGGAGTAGGCGGCCCTGGGGCCAGTGGTTGTaGGTCTCAGTGAAGGTGTTG +
Preference number: 5 (lower is better)
Translates to: AHIYLLASVTSICRSRRPWGQWL*VSVKVL
Trigger: CAACACCTTCACTGAGACCAACAACCACTGGCCCCA...GGGCCGCCTACTCCTGCAAATGCTTGTGACAGATGCCAGGAGGTAGATGTGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR CAA 90 bp AGGGACCCTGAGGACATTAATAAATATGGACGGGCGGTCCCTGGAGGCAGCTGGTGGGGCCAGTGGTTGTaGGTCTCAGTGAAGGTGTTG +
Preference number: 5 (lower is better)
Translates to: RDPEDINKYGRAVPGGSWWGQWL*VSVKVL
Trigger: CAACACCTTCACTGAGACCAACAACCACTGGCCCCA...CCAGCTGCCTCCAGGGACCGCCCGTCCATATTTATTAATGTCCTCAGGGTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR CAA 90 bp ATCTACCTCCTGGCATCTGTCACAAGCATTTGCAGGAGTAGGCGGCCCCTTCCTCTCTCCTCTCAGCCCTaGCTCAGCCTCAGACATGTG +
Preference number: 5 (lower is better)
Translates to: IYLLASVTSICRSRRPLPLSSQP*LSLRHV
Trigger: CACATGTCTGAGGCTGAGCAAGGGCTGAGAGGAGAG...AGGAAGGGGCCGCCTACTCCTGCAAATGCTTGTGACAGATGCCAGGAGGTAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS CCA 90 bp ACCTCCACTCACGGGCGGTCACTATCTTGTACATCACCTTGTATGTaGGTCTCACCACAGTTCTGTAGCTGCTCCCCGGACAGCTCATGG +
Preference number: 5 (lower is better)
Translates to: TSTHGRSLSCTSPCM*VSPQFCSCSPDSSW
Trigger: CCATGAGCTGTCCGGGGAGCAGCTACAGAACTGTGGTGAGACCCACATACAAGGTGATGTACAAGATAGTGACCGCCCGTGAGTGGAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
ENST00000429226.5
ENST00000430127.1
CDS-3UTR CAA 90 bp CAGAGGGAAGAACTGAGGCAAGAAGCCCCCGGTGATCCAGTCAGAGGATTGGGCGACACTTTGCTGCAGTaGAGACAACCTGAGAAGGCT +
Preference number: 5 (lower is better)
Translates to: QREELRQEAPGDPVRGLGDTLLQ*RQPEKA
Trigger: AGCCTTCTCAGGTTGTCTCAACTGCAGCAAAGTGTC...GCCCAATCCTCTGACTGGATCACCGGGGGCTTCTTGCCTCAGTTCTTCCCTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR CAA 90 bp ATCTACCTCCTGGCATCTGTCACAAGCATTTGCAGGAGTAGGCGGCCCCTTCCTTGGGGCCAGTGGTTGTaGGTCTCAGTGAAGGTGTTG +
Preference number: 5 (lower is better)
Translates to: IYLLASVTSICRSRRPLPWGQWL*VSVKVL
Trigger: CAACACCTTCACTGAGACCAACAACCACTGGCCCCA...AGGAAGGGGCCGCCTACTCCTGCAAATGCTTGTGACAGATGCCAGGAGGTAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR CAA 90 bp CCTTTGGGCCTGGATGCTCAGACAGCAGATGAGACGAAGCCTTGTACCTCTATCCTCTCCTCTCAGCCCTaGCTCAGCCTCAGACATGTG +
Preference number: 5 (lower is better)
Translates to: PLGLDAQTADETKPCTSILSSQP*LSLRHV
Trigger: CACATGTCTGAGGCTGAGCAAGGGCTGAGAGGAGAG...GATAGAGGTACAAGGCTTCGTCTCATCTGCTGTCTGAGCATCCAGGCCCAAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR CAA 90 bp AGGGACCCTGAGGACATTAATAAATATGGACGGGCGGTCCCTGGAGGCAGCTGGCGGGCGGTCACTATCTaGTACATCACCTTGTATGTG +
Preference number: 5 (lower is better)
Translates to: RDPEDINKYGRAVPGGSWRAVTI*YITLYV
Trigger: CACATACAAGGTGATGTACAAGATAGTGACCGCCCG...CCAGCTGCCTCCAGGGACCGCCCGTCCATATTTATTAATGTCCTCAGGGTCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR CAA 90 bp GCACACATCTACCTCCTGGCATCTGTCACAAGCATTTGCAGGAGTAGGCGGCCCGACACTTTGCTGCAGTaGAGACAACCTGAGAAGGCT +
Preference number: 5 (lower is better)
Translates to: AHIYLLASVTSICRSRRPDTLLQ*RQPEKA
Trigger: AGCCTTCTCAGGTTGTCTCAACTGCAGCAAAGTGTC...GGGCCGCCTACTCCTGCAAATGCTTGTGACAGATGCCAGGAGGTAGATGTGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS CCA 90 bp CACCTACTGTGTGCCAGGCTTCTGTACATGGATGTTACGCAGCTCTaGGAGGCTGGCACTGTCATTGTCCCCATCGTATGGATAGTGAGA +
Preference number: 5 (lower is better)
Translates to: HLLCARLLYMDVTQL*EAGTVIVPIVWIVR
Trigger: TCTCACTATCCATACGATGGGGACAATGACAGTGCCAGCCTCCCAGAGCTGCGTAACATCCATGTACAGAAGCCTGGCACACAGTAGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473933.1
CDS-3UTR CAA 90 bp ATCTACCTCCTGGCATCTGTCACAAGCATTTGCAGGAGTAGGCGGCCCCTTCCTCGGGCGGTCACTATCTaGTACATCACCTTGTATGTG +
Preference number: 5 (lower is better)
Translates to: IYLLASVTSICRSRRPLPRAVTI*YITLYV
Trigger: CACATACAAGGTGATGTACAAGATAGTGACCGCCCG...AGGAAGGGGCCGCCTACTCCTGCAAATGCTTGTGACAGATGCCAGGAGGTAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS CCA 90 bp AGATACCATTTATCCACCACCTACTGTGTGCCAGGCTTCTGTACATaGATGTTACGCAGCTCTGGGAGGCTGGCACTGTCATTGTCCCCA +
Preference number: 5 (lower is better)
Translates to: RYHLSTTYCVPGFCT*MLRSSGRLALSLSP
Trigger: TGGGGACAATGACAGTGCCAGCCTCCCAGAGCTGCGTAACATCCATGTACAGAAGCCTGGCACACAGTAGGTGGTGGATAAATGGTATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473933.1
CDS-3UTR CAA 90 bp GGCAGAAGGGACCCTGAGGACATTAATAAATATGGACGGGCGGTCCCTGGAGGCATCTTGTACATCACCTaGTATGTGGGTCTCACCACA +
Preference number: 5 (lower is better)
Translates to: GRRDPEDINKYGRAVPGGILYIT*YVGLTT
Trigger: TGTGGTGAGACCCACATACAAGGTGATGTACAAGAT...GCCTCCAGGGACCGCCCGTCCATATTTATTAATGTCCTCAGGGTCCCTTCTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR CAA 90 bp CACACATCTACCTCCTGGCATCTGTCACAAGCATTTGCAGGAGTAGGCGGCCCCATCTTGTACATCACCTaGTATGTGGGTCTCACCACA +
Preference number: 5 (lower is better)
Translates to: HTSTSWHLSQAFAGVGGPILYIT*YVGLTT
Trigger: TGTGGTGAGACCCACATACAAGGTGATGTACAAGAT...GGGGCCGCCTACTCCTGCAAATGCTTGTGACAGATGCCAGGAGGTAGATGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR CAA 90 bp CCTTTGGGCCTGGATGCTCAGACAGCAGATGAGACGAAGCCTTGTACCTCTATCGACACTTTGCTGCAGTaGAGACAACCTGAGAAGGCT +
Preference number: 5 (lower is better)
Translates to: PLGLDAQTADETKPCTSIDTLLQ*RQPEKA
Trigger: AGCCTTCTCAGGTTGTCTCAACTGCAGCAAAGTGTC...GATAGAGGTACAAGGCTTCGTCTCATCTGCTGTCTGAGCATCCAGGCCCAAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS-3UTR CAA 90 bp ACATCTACCTCCTGGCATCTGTCACAAGCATTTGCAGGAGTAGGCGGCCCCTTCATCTTGTACATCACCTaGTATGTGGGTCTCACCACA +
Preference number: 5 (lower is better)
Translates to: TSTSWHLSQAFAGVGGPFILYIT*YVGLTT
Trigger: TGTGGTGAGACCCACATACAAGGTGATGTACAAGAT...GAAGGGGCCGCCTACTCCTGCAAATGCTTGTGACAGATGCCAGGAGGTAGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS GCA 90 bp AATGAATGCTGGGATGGCAGAATGAATGAATGGTGTGCTGGGTTGTaGACCAAAAACACAGTGGAGAAGAGGCTGAAACCTGGCGCTCCA +
Preference number: 5 (lower is better)
Translates to: NECWDGRMNEWCAGL*TKNTVEKRLKPGAP
Trigger: TGGAGCGCCAGGTTTCAGCCTCTTCTCCACTGTGTTTTTGGTGCACAACCCAGCACACCATTCATTCATTCTGCCATCCCAGCATTCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473933.1
CDS GCA 90 bp GGCACTGTCATTGTCCCCATCGTATGGATAGTGAGATGGAATGAATaGTGGGATGGCAGAATGAATGAATGGTGTGCTGGGTTGTGCACC +
Preference number: 5 (lower is better)
Translates to: GTVIVPIVWIVRWNE*WDGRMNEWCAGLCT
Trigger: GGTGCACAACCCAGCACACCATTCATTCATTCTGCCATCCCAGCATTCATTCCATCTCACTATCCATACGATGGGGACAATGACAGTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473933.1
CDS CCA 90 bp GTTACGCAGCTCTGGGAGGCTGGCACTGTCATTGTCCCCATCGTATaGATAGTGAGATGGAATGAATGCTGGGATGGCAGAATGAATGAA +
Preference number: 5 (lower is better)
Translates to: VTQLWEAGTVIVPIV*IVRWNECWDGRMNE
Trigger: TTCATTCATTCTGCCATCCCAGCATTCATTCCATCTCACTATCCATACGATGGGGACAATGACAGTGCCAGCCTCCCAGAGCTGCGTAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473933.1
CDS-3UTR CAA 90 bp AGGGACCCTGAGGACATTAATAAATATGGACGGGCGGTCCCTGGAGGCAGCTGGCATAGAGCCCAATCATaGTTTCCAAGATTAAAACCC +
Preference number: 5 (lower is better)
Translates to: RDPEDINKYGRAVPGGSWHRAQS*FPRLKP
Trigger: GGGTTTTAATCTTGGAAACAATGATTGGGCTCTATG...CCAGCTGCCTCCAGGGACCGCCCGTCCATATTTATTAATGTCCTCAGGGTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334018.11
ENST00000404755.7
CDS TCA 90 bp TGCGGGCCTGACTCTGTTACCCATGATTTCTCTAGAGCTGAAGGCTaGCTAGAGTCTGGATCCATTACCTATAATCCTCCTGTTGTCCTG +
Preference number: 5 (lower is better)
Translates to: CGPDSVTHDFSRAEG*LESGSITYNPPVVL
Trigger: CAGGACAACAGGAGGATTATAGGTAATGGATCCAGACTCTAGTCAGCCTTCAGCTCTAGAGAAATCATGGGTAACAGAGTCAGGCCCGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487477.1
CDS CCA 90 bp TCTGGATCCATTACCTATAATCCTCCTGTTGTCCTGAGCTGTGATTaGATTCCCCATGGTTCCTTGCACTCCAGGAGTCTGGCTCTGTTA +
Preference number: 5 (lower is better)
Translates to: SGSITYNPPVVLSCD*IPHGSLHSRSLALL
Trigger: TAACAGAGCCAGACTCCTGGAGTGCAAGGAACCATGGGGAATCCAATCACAGCTCAGGACAACAGGAGGATTATAGGTAATGGATCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487477.1
CDS-3UTR CAA 90 bp TTGCTCAGCCTCAGACATGTGCATGGTGCCAGGACTGAGACCTGCTTACCCCTACATAGAGCCCAATCATaGTTTCCAAGATTAAAACCC +
Preference number: 5 (lower is better)
Translates to: LLSLRHVHGARTETCLPLHRAQS*FPRLKP
Trigger: GGGTTTTAATCTTGGAAACAATGATTGGGCTCTATG...TAGGGGTAAGCAGGTCTCAGTCCTGGCACCATGCACATGTCTGAGGCTGAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334018.11
ENST00000404755.7
CDS CCA 90 bp CACTCCAGGAGTCTGGCTCTGTTACCCACAATCCCACTGCTGGAGTaGAGTTTGGTTCCATTGCCCATAATTTCTTCCAAACTTAAAATC +
Preference number: 5 (lower is better)
Translates to: HSRSLALLPTIPLLE*SLVPLPIISSKLKI
Trigger: GATTTTAAGTTTGGAAGAAATTATGGGCAATGGAACCAAACTCCACTCCAGCAGTGGGATTGTGGGTAACAGAGCCAGACTCCTGGAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487477.1
CDS GCA 72 bp ACCAGTTCCTGCGTCCGGAGAACGGAGCTGCCCCGATaGTCCACGCAGCGCCGCCTCCCGGGAGCAGGAGCC +
Preference number: 6 (lower is better)
Translates to: TSSCVRRTELPR*STQRRLPGAGA
Trigger: GGCTCCTGCTCCCGGGAGGCGGCGCTGCGTGGAGCATCGGGGCAGCTCCGTTCTCCGGACGCAGGAACTGGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
ENST00000429226.5
ENST00000430127.1
CDS GCA 72 bp ATGGTCATCTGCGTCCGGAGAACGGAGCTGCCCCGATaGTCCACGCAGCGCCGCCTCCCGGGAGCAGGAGCC +
Preference number: 6 (lower is better)
Translates to: MVICVRRTELPR*STQRRLPGAGA
Trigger: GGCTCCTGCTCCCGGGAGGCGGCGCTGCGTGGAGCATCGGGGCAGCTCCGTTCTCCGGACGCAGATGACCAT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435427.5
CDS GCA 72 bp ATAGGAGCACCAGTTCCTGCGTCCGGAGAACGGAGCTaGCCCGATGCTCCACGCAGCGCCGCCTCCCGGGAG +
Preference number: 6 (lower is better)
Translates to: IGAPVPASGERS*PDAPRSAASRE
Trigger: CTCCCGGGAGGCGGCGCTGCGTGGAGCATCGGGGCAGCTCCGTTCTCCGGACGCAGGAACTGGTGCTCCTAT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
ENST00000429226.5
ENST00000430127.1
CDS GCA 72 bp CAGTCAGCATGGTCATCTGCGTCCGGAGAACGGAGCTaGCCCGATGCTCCACGCAGCGCCGCCTCCCGGGAG +
Preference number: 6 (lower is better)
Translates to: QSAWSSASGERS*PDAPRSAASRE
Trigger: CTCCCGGGAGGCGGCGCTGCGTGGAGCATCGGGGCAGCTCCGTTCTCCGGACGCAGATGACCATGCTGACTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435427.5
CDS GCA 72 bp CCACGATCCGGTAGTTGGTTGCATGTCCGCCCCTCTTaGCCCGAAGGAGGCTGGGGGTGCCTGTGCCGGCAG +
Preference number: 6 (lower is better)
Translates to: PRSGSWLHVRPS*PEGGWGCLCRQ
Trigger: CTGCCGGCACAGGCACCCCCAGCCTCCTTCGGGGCAAGAGGGGCGGACATGCAACCAACTACCGGATCGTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
CDS CCA 72 bp CTGAGAAGGCTGTGGGCCGAAGCGCCATCCGCCGCATaGTACTGCCCGACCACATGGGCTCCAAGGAGGCAG +
Preference number: 6 (lower is better)
Translates to: LRRLWAEAPSAA*YCPTTWAPRRQ
Trigger: CTGCCTCCTTGGAGCCCATGTGGTCGGGCAGTACCATGCGGCGGATGGCGCTTCGGCCCACAGCCTTCTCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
ENST00000429226.5
ENST00000484039.5
CDS TCA 72 bp GGCAGAGGAAGCTGCAACTTCCTCGCAGCTCACTCCTaGGTGCCCAGGGCAGCACCTCCACTCACGGGCGGT +
Preference number: 6 (lower is better)
Translates to: GRGSCNFLAAHS*VPRAAPPLTGG
Trigger: ACCGCCCGTGAGTGGAGGTGCTGCCCTGGGCACTCAGGAGTGAGCTGCGAGGAAGTTGCAGCTTCCTCTGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
ENST00000429226.5
CDS CCA 72 bp CACTCTGACCCCTGGCAGCCCATGGGCAGGTCAGGCTaGGCTGCCAAAGGGAAGAAGCCAAGGACGCACGTC +
Preference number: 6 (lower is better)
Translates to: HSDPWQPMGRSG*AAKGKKPRTHV
Trigger: GACGTGCGTCCTTGGCTTCTTCCCTTTGGCAGCCCAGCCTGACCTGCCCATGGGCTGCCAGGGGTCAGAGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473933.1
CDS CCA 72 bp GCTTGGACTGCCCTATGGGGCAGCCTGCAGCATGGCTaGTACCACCTGGGCACCTGCTCCAGGGTGAGGAGT +
Preference number: 6 (lower is better)
Translates to: AWTALWGSLQHG*YHLGTCSRVRS
Trigger: ACTCCTCACCCTGGAGCAGGTGCCCAGGTGGTACCAGCCATGCTGCAGGCTGCCCCATAGGGCAGTCCAAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473933.1
CDS CCA 72 bp GACAGCTTGGACTGCCCTATGGGGCAGCCTGCAGCATaGCTGGTACCACCTGGGCACCTGCTCCAGGGTGAG +
Preference number: 6 (lower is better)
Translates to: DSLDCPMGQPAA*LVPPGHLLQGE
Trigger: CTCACCCTGGAGCAGGTGCCCAGGTGGTACCAGCCATGCTGCAGGCTGCCCCATAGGGCAGTCCAAGCTGTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473933.1
CDS CCA 72 bp CCTGCCACCTCTGCCAAGACAGCTTGGACTGCCCTATaGGGCAGCCTGCAGCATGGCTGGTACCACCTGGGC +
Preference number: 6 (lower is better)
Translates to: PATSAKTAWTAL*GSLQHGWYHLG
Trigger: GCCCAGGTGGTACCAGCCATGCTGCAGGCTGCCCCATAGGGCAGTCCAAGCTGTCTTGGCAGAGGTGGCAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473933.1
CDS GCA 72 bp ACCACAGCAGCAGGGCCCGGGTTTCTAGGGCACCCCTaGACCCGTGGAGGAGGGAACCAGTCATTGAGGGAA +
Preference number: 6 (lower is better)
Translates to: TTAAGPGFLGHP*TRGGGNQSLRE
Trigger: TTCCCTCAATGACTGGTTCCCTCCTCCACGGGTGCAGGGGTGCCCTAGAAACCCGGGCCCTGCTGCTGTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487477.1
CDS CCA 72 bp GAGGGCCTGATGCCCGGTGGCTCTAAGCACAGGTTCTaGAGGCAGCCTGGGTTTGAAGCCGTTCCCCTACGC +
Preference number: 6 (lower is better)
Translates to: EGLMPGGSKHRF*RQPGFEAVPLR
Trigger: GCGTAGGGGAACGGCTTCAAACCCAGGCTGCCTCCAGAACCTGTGCTTAGAGCCACCGGGCATCAGGCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473933.1
CDS CCA 72 bp AAGAGGCTGAAACCTGGCGCTCCACACTCTGACCCCTaGCAGCCCATGGGCAGGTCAGGCTGGGCTGCCAAA +
Preference number: 6 (lower is better)
Translates to: KRLKPGAPHSDP*QPMGRSGWAAK
Trigger: TTTGGCAGCCCAGCCTGACCTGCCCATGGGCTGCCAGGGGTCAGAGTGTGGAGCGCCAGGTTTCAGCCTCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473933.1
CDS CCA 72 bp AGCAGGGCCCGGGTTTCTAGGGCACCCCTGCACCCGTaGAGGAGGGAACCAGTCATTGAGGGAAGGGTGGTT +
Preference number: 6 (lower is better)
Translates to: SRARVSRAPLHP*RREPVIEGRVV
Trigger: AACCACCCTTCCCTCAATGACTGGTTCCCTCCTCCACGGGTGCAGGGGTGCCCTAGAAACCCGGGCCCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487477.1
CDS CAA 72 bp GTGGCTCTAAGCACAGGTTCTGGAGGCAGCCTGGGTTaGAAGCCGTTCCCCTACGCCCAGGCTGTGGGACCC +
Preference number: 6 (lower is better)
Translates to: VALSTGSGGSLG*KPFPYAQAVGP
Trigger: GGGTCCCACAGCCTGGGCGTAGGGGAACGGCTTCAAACCCAGGCTGCCTCCAGAACCTGTGCTTAGAGCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473933.1
CDS CAA 90 bp CCCTGCACCCGTGGAGGAGGGAACCAGTCATTGAGGGAAGGGTGGTaGTGGCCTCTCAGGTCCATGCTTGCCTGGGGCAGGCACCTTCTC +
Preference number: 6 (lower is better)
Translates to: PCTRGGGNQSLREGW*WPLRSMLAWGRHLL
Trigger: GAGAAGGTGCCTGCCCCAGGCAAGCATGGACCTGAGAGGCCACAACCACCCTTCCCTCAATGACTGGTTCCCTCCTCCACGGGTGCAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487477.1
CDS TCA 72 bp CGCCTGCTGGAGGACTGGGTCACATGTGGCCTATCGTaGGCAGGGCTGGCACACAGAAGGCACGTGGCAGAT +
Preference number: 6 (lower is better)
Translates to: RLLEDWVTCGLS*AGLAHRRHVAD
Trigger: ATCTGCCACGTGCCTTCTGTGTGCCAGCCCTGCTCACGATAGGCCACATGTGACCCAGTCCTCCAGCAGGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473933.1
CDS GCA 72 bp CGGGCCTGTGGCCTTGGGAGTTCAGGACTCACTTCCTaGCGCCGGGTCTTTTGCGTCCCAGTGTTCCGAGAA +
Preference number: 6 (lower is better)
Translates to: RACGLGSSGLTS*RRVFCVPVFRE
Trigger: TTCTCGGAACACTGGGACGCAAAAGACCCGGCGGCAGGAAGTGAGTCCTGAACTCCCAAGGCCACAGGCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473933.1
CDS CCA 72 bp GAAGCGCCATCCGCCGCATGGTACTGCCCGACCACATaGGCTCCAAGGAGGCAGAGGAAGCTGCAACTTCCT +
Preference number: 6 (lower is better)
Translates to: EAPSAAWYCPTT*APRRQRKLQLP
Trigger: AGGAAGTTGCAGCTTCCTCTGCCTCCTTGGAGCCCATGTGGTCGGGCAGTACCATGCGGCGGATGGCGCTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
ENST00000429226.5
ENST00000484039.5
CDS CCA 72 bp AGGACTGGGTCACATGTGGCCTATCGTGAGCAGGGCTaGCACACAGAAGGCACGTGGCAGATGGTAGCGGGC +
Preference number: 6 (lower is better)
Translates to: RTGSHVAYREQG*HTEGTWQMVAG
Trigger: GCCCGCTACCATCTGCCACGTGCCTTCTGTGTGCCAGCCCTGCTCACGATAGGCCACATGTGACCCAGTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473933.1
CDS CCA 72 bp AGGACAACGGCGCCTGCTGGAGGACTGGGTCACATGTaGCCTATCGTGAGCAGGGCTGGCACACAGAAGGCA +
Preference number: 6 (lower is better)
Translates to: RTTAPAGGLGHM*PIVSRAGTQKA
Trigger: TGCCTTCTGTGTGCCAGCCCTGCTCACGATAGGCCACATGTGACCCAGTCCTCCAGCAGGCGCCGTTGTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473933.1
CDS CCA 72 bp GCCGCCGGGTCTTTTGCGTCCCAGTGTTCCGAGAACTaGATTCCAGCCAGTTCCAAGGCTTGGGAGGGCCTG +
Preference number: 6 (lower is better)
Translates to: AAGSFASQCSEN*IPASSKAWEGL
Trigger: CAGGCCCTCCCAAGCCTTGGAACTGGCTGGAATCCAGTTCTCGGAACACTGGGACGCAAAAGACCCGGCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473933.1
CDS CCA 72 bp ACCCGTGGAGGAGGGAACCAGTCATTGAGGGAAGGGTaGTTGTGGCCTCTCAGGTCCATGCTTGCCTGGGGC +
Preference number: 6 (lower is better)
Translates to: TRGGGNQSLREG*LWPLRSMLAWG
Trigger: GCCCCAGGCAAGCATGGACCTGAGAGGCCACAACCACCCTTCCCTCAATGACTGGTTCCCTCCTCCACGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487477.1
CDS CAA 72 bp CGTGGAGGAGGGAACCAGTCATTGAGGGAAGGGTGGTaGTGGCCTCTCAGGTCCATGCTTGCCTGGGGCAGG +
Preference number: 6 (lower is better)
Translates to: RGGGNQSLREGW*WPLRSMLAWGR
Trigger: CCTGCCCCAGGCAAGCATGGACCTGAGAGGCCACAACCACCCTTCCCTCAATGACTGGTTCCCTCCTCCACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487477.1
CDS CAA 90 bp ATCTTGGCCTCCAGCACCTTCAGCCGCTCTGTCAGCTCTGACACTTaGCTGCAGTTGAGACAACCTGCGGGGAGGGAGGAAGCTGGGGCC +
Preference number: 6 (lower is better)
Translates to: ILASSTFSRSVSSDT*LQLRQPAGREEAGA
Trigger: GGCCCCAGCTTCCTCCCTCCCCGCAGGTTGTCTCAACTGCAGCAAAGTGTCAGAGCTGACAGAGCGGCTGAAGGTGCTGGAGGCCAAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484039.5
CDS TCA 72 bp ACTGGATTCCAGCCAGTTCCAAGGCTTGGGAGGGCCTaGTGCCCGGTGGCTCTAAGCACAGGTTCTGGAGGC +
Preference number: 6 (lower is better)
Translates to: TGFQPVPRLGRA*CPVALSTGSGG
Trigger: GCCTCCAGAACCTGTGCTTAGAGCCACCGGGCATCAGGCCCTCCCAAGCCTTGGAACTGGCTGGAATCCAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473933.1
CDS TCA 72 bp AGGCACCATTTGCTGGCTGGCTGGCTGGATGAAGAATaGGTGTCCGCTGGCCTGGGCCAAGCATCGGAAGGC +
Preference number: 6 (lower is better)
Translates to: RHHLLAGWLDEE*VSAGLGQASEG
Trigger: GCCTTCCGATGCTTGGCCCAGGCCAGCGGACACTCATTCTTCATCCAGCCAGCCAGCCAGCAAATGGTGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488820.6
CDS GCA 72 bp GTCTTCACCTGCCACCTCTGCCAAGACAGCTTGGACTaGCCTATGGGGCAGCCTGCAGCATGGCTGGTACCA +
Preference number: 6 (lower is better)
Translates to: VFTCHLCQDSLD*PMGQPAAWLVP
Trigger: TGGTACCAGCCATGCTGCAGGCTGCCCCATAGGGCAGTCCAAGCTGTCTTGGCAGAGGTGGCAGGTGAAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473933.1
CDS CAA 90 bp AGAGTGGGGTGGTTAGTCTTCACCTGCCACCTCTGCCAAGACAGCTaGGACTGCCCTATGGGGCAGCCTGCAGCATGGCTGGTACCACCT +
Preference number: 6 (lower is better)
Translates to: RVGWLVFTCHLCQDS*DCPMGQPAAWLVPP
Trigger: AGGTGGTACCAGCCATGCTGCAGGCTGCCCCATAGGGCAGTCCAAGCTGTCTTGGCAGAGGTGGCAGGTGAAGACTAACCACCCCACTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473933.1
CDS TCA 72 bp CAGTGGGTCCCTGGGGCCAGTGGTTGTTGGTCTCAGTaGAGGTGTTGGACAGCAATGGGTCTCCATGCTGGG +
Preference number: 6 (lower is better)
Translates to: QWVPGASGCWSQ*RCWTAMGLHAG
Trigger: CCCAGCATGGAGACCCATTGCTGTCCAACACCTTCACTGAGACCAACAACCACTGGCCCCAGGGACCCACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
ENST00000433143.1
ENST00000484039.5
ENST00000488820.6
CDS TCA 72 bp AGCAGCATGGAAGCTCCAGAAGGGCAGGGACATGTCTaGCCCCACCCAGTGCCCAGCTCAGAGCCTGATAAG +
Preference number: 6 (lower is better)
Translates to: SSMEAPEGQGHV*PHPVPSSEPDK
Trigger: CTTATCAGGCTCTGAGCTGGGCACTGGGTGGGGTCAGACATGTCCCTGCCCTTCTGGAGCTTCCATGCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473933.1
CDS TCA 72 bp CACAGGCCTAGGCTGCCTGGTAGTCTAACAGGGGGATaGGCACAGCACCTAGTTCTCCACCTCGTCCAGGCT +
Preference number: 6 (lower is better)
Translates to: HRPRLPGSLTGG*AQHLVLHLVQA
Trigger: AGCCTGGACGAGGTGGAGAACTAGGTGCTGTGCTCATCCCCCTGTTAGACTACCAGGCAGCCTAGGCCTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473933.1
CDS TCA 72 bp CAGTGGGTCCCTGGGGCCAGTGGTTGTTGGTCTCAGTaGAGGTGTTGGACAGCAATGGGTCTCCTGGGTGAG +
Preference number: 6 (lower is better)
Translates to: QWVPGASGCWSQ*RCWTAMGLLGE
Trigger: CTCACCCAGGAGACCCATTGCTGTCCAACACCTTCACTGAGACCAACAACCACTGGCCCCAGGGACCCACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473933.1
ENST00000487477.1
CDS GCA 72 bp GCCAGGGGCAGTTCTGCAGCACTCGCTGAAGGTAGGTaGCATTCTGCACATGGCATGAGATGGTGCGGGTCA +
Preference number: 6 (lower is better)
Translates to: ARGSSAALAEGR*HSAHGMRWCGS
Trigger: TGACCCGCACCATCTCATGCCATGTGCAGAATGGCACCTACCTTCAGCGAGTGCTGCAGAACTGCCCCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
ENST00000429226.5
ENST00000430127.1
CDS GCA 72 bp GGGTCCTCAGGGGTAGCTGGTGTTGGAGGTACTGGCTaGTCTATGACAGTCAGCATGGTCATCTGCGTCCGG +
Preference number: 6 (lower is better)
Translates to: GSSGVAGVGGTG*SMTVSMVICVR
Trigger: CCGGACGCAGATGACCATGCTGACTGTCATAGAGCAGCCAGTACCTCCAACACCAGCTACCCCTGAGGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435427.5
CDS GCA 72 bp GGGAGTTCAGGACTCACTTCCTGCCGCCGGGTCTTTTaGGTCCCAGTGTTCCGAGAACTGGATTCCAGCCAG +
Preference number: 6 (lower is better)
Translates to: GSSGLTSCRRVF*VPVFRELDSSQ
Trigger: CTGGCTGGAATCCAGTTCTCGGAACACTGGGACGCAAAAGACCCGGCGGCAGGAAGTGAGTCCTGAACTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473933.1
CDS GCA 72 bp GGTAGAGTGGGGTGGTTAGTCTTCACCTGCCACCTCTaGCAAGACAGCTTGGACTGCCCTATGGGGCAGCCT +
Preference number: 6 (lower is better)
Translates to: GRVGWLVFTCHL*QDSLDCPMGQP
Trigger: AGGCTGCCCCATAGGGCAGTCCAAGCTGTCTTGGCAGAGGTGGCAGGTGAAGACTAACCACCCCACTCTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473933.1
CDS CAA 72 bp CCCTGGGGCCAGTGGTTGTTGGTCTCAGTGAAGGTGTaGGACAGCAATGGGTCTCCATGCTGGGAGATCCGG +
Preference number: 6 (lower is better)
Translates to: PWGQWLLVSVKV*DSNGSPCWEIR
Trigger: CCGGATCTCCCAGCATGGAGACCCATTGCTGTCCAACACCTTCACTGAGACCAACAACCACTGGCCCCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
ENST00000433143.1
ENST00000484039.5
ENST00000488820.6
CDS CAA 72 bp TGGTTAGTCTTCACCTGCCACCTCTGCCAAGACAGCTaGGACTGCCCTATGGGGCAGCCTGCAGCATGGCTG +
Preference number: 6 (lower is better)
Translates to: WLVFTCHLCQDS*DCPMGQPAAWL
Trigger: CAGCCATGCTGCAGGCTGCCCCATAGGGCAGTCCAAGCTGTCTTGGCAGAGGTGGCAGGTGAAGACTAACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473933.1
CDS CAA 90 bp CTGTGGCCTTGGGAGTTCAGGACTCACTTCCTGCCGCCGGGTCTTTaGCGTCCCAGTGTTCCGAGAACTGGATTCCAGCCAGTTCCAAGG +
Preference number: 6 (lower is better)
Translates to: LWPWEFRTHFLPPGL*RPSVPRTGFQPVPR
Trigger: CCTTGGAACTGGCTGGAATCCAGTTCTCGGAACACTGGGACGCAAAAGACCCGGCGGCAGGAAGTGAGTCCTGAACTCCCAAGGCCACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473933.1
CDS TCA 72 bp CTGGGTTGTGCACCAAAAACACAGTGGAGAAGAGGCTaGAACCTGGCGCTCCACACTCTGACCCCTGGCAGC +
Preference number: 6 (lower is better)
Translates to: LGCAPKTQWRRG*NLALHTLTPGS
Trigger: GCTGCCAGGGGTCAGAGTGTGGAGCGCCAGGTTTCAGCCTCTTCTCCACTGTGTTTTTGGTGCACAACCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473933.1
CDS GCA 72 bp GGGTCCTCAGGGGTAGCTGGTGTTGGAGGTACTGGCTaGTCTATGACAGTCAGCATGGTCATCTTGGCCTCC +
Preference number: 6 (lower is better)
Translates to: GSSGVAGVGGTG*SMTVSMVILAS
Trigger: GGAGGCCAAGATGACCATGCTGACTGTCATAGAGCAGCCAGTACCTCCAACACCAGCTACCCCTGAGGACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
ENST00000429226.5
ENST00000430127.1
ENST00000484039.5
CDS CCA 72 bp GTGACCAGAGCCTTCTCTCTGCCAGGCACCATTTGCTaGCTGGCTGGCTGGATGAAGAATGAGTGTCCGCTG +
Preference number: 6 (lower is better)
Translates to: VTRAFSLPGTIC*LAGWMKNECPL
Trigger: CAGCGGACACTCATTCTTCATCCAGCCAGCCAGCCAGCAAATGGTGCCTGGCAGAGAGAAGGCTCTGGTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488820.6
CDS CAA 72 bp TGGGAGTTCAGGACTCACTTCCTGCCGCCGGGTCTTTaGCGTCCCAGTGTTCCGAGAACTGGATTCCAGCCA +
Preference number: 6 (lower is better)
Translates to: WEFRTHFLPPGL*RPSVPRTGFQP
Trigger: TGGCTGGAATCCAGTTCTCGGAACACTGGGACGCAAAAGACCCGGCGGCAGGAAGTGAGTCCTGAACTCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473933.1
CDS TCA 72 bp ATGAGCACAGCACCTAGTTCTCCACCTCGTCCAGGCTaGGTCTTCCTTCCTTGGGGCTCCCAAACCCCCAAA +
Preference number: 6 (lower is better)
Translates to: MSTAPSSPPRPG*VFLPWGSQTPK
Trigger: TTTGGGGGTTTGGGAGCCCCAAGGAAGGAAGACTCAGCCTGGACGAGGTGGAGAACTAGGTGCTGTGCTCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473933.1
CDS TCA 72 bp CACTCGCTGAAGGTAGGTGCCATTCTGCACATGGCATaGGATGGTGCGGGTCACCACATAGGAGCACCAGTT +
Preference number: 6 (lower is better)
Translates to: HSLKVGAILHMA*DGAGHHIGAPV
Trigger: AACTGGTGCTCCTATGTGGTGACCCGCACCATCTCATGCCATGTGCAGAATGGCACCTACCTTCAGCGAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
ENST00000429226.5
ENST00000430127.1
CDS TCA 72 bp ACATGGGTGAGAGTACAAGGAGAACTACTCACTATGTaGCCAGGACTCCCAGGGACACCTGTGGGGCCAGGA +
Preference number: 6 (lower is better)
Translates to: TWVRVQGELLTM*PGLPGTPVGPG
Trigger: TCCTGGCCCCACAGGTGTCCCTGGGAGTCCTGGTCACATAGTGAGTAGTTCTCCTTGTACTCTCACCCATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473933.1
CDS CCA 72 bp CACGGGCGGTCACTATCTTGTACATCACCTTGTATGTaGGTCTCACCACAGTTCTGTAGCTGCTCCCCGGAC +
Preference number: 6 (lower is better)
Translates to: HGRSLSCTSPCM*VSPQFCSCSPD
Trigger: GTCCGGGGAGCAGCTACAGAACTGTGGTGAGACCCACATACAAGGTGATGTACAAGATAGTGACCGCCCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334018.11
ENST00000404755.7
ENST00000404820.7
ENST00000429226.5
ENST00000430127.1
CDS CCA 72 bp TGTGCCAGGCTTCTGTACATGGATGTTACGCAGCTCTaGGAGGCTGGCACTGTCATTGTCCCCATCGTATGG +
Preference number: 6 (lower is better)
Translates to: CARLLYMDVTQL*EAGTVIVPIVW
Trigger: CCATACGATGGGGACAATGACAGTGCCAGCCTCCCAGAGCTGCGTAACATCCATGTACAGAAGCCTGGCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473933.1
CDS CCA 72 bp ATTGGATTCCCCATGGTTCCTTGCACTCCAGGAGTCTaGCTCTGTTACCCACAATCCCACTGCTGGAGTGGA +
Preference number: 6 (lower is better)
Translates to: IGFPMVPCTPGV*LCYPQSHCWSG
Trigger: TCCACTCCAGCAGTGGGATTGTGGGTAACAGAGCCAGACTCCTGGAGTGCAAGGAACCATGGGGAATCCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487477.1
CDS CAA 90 bp AATCCTCCTGTTGTCCTGAGCTGTGATTGGATTCCCCATGGTTCCTaGCACTCCAGGAGTCTGGCTCTGTTACCCACAATCCCACTGCTG +
Preference number: 6 (lower is better)
Translates to: NPPVVLSCDWIPHGS*HSRSLALLPTIPLL
Trigger: CAGCAGTGGGATTGTGGGTAACAGAGCCAGACTCCTGGAGTGCAAGGAACCATGGGGAATCCAATCACAGCTCAGGACAACAGGAGGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487477.1
CDS CCA 72 bp GCTCAGAGCCTGATAAGTGTAGGTGCCCAGGGAATGTaGGTCAGTGAACATAAGAGAGGACTTCATGGAGCC +
Preference number: 6 (lower is better)
Translates to: AQSLISVGAQGM*VSEHKRGLHGA
Trigger: GGCTCCATGAAGTCCTCTCTTATGTTCACTGACCCACATTCCCTGGGCACCTACACTTATCAGGCTCTGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473933.1
CDS CCA 72 bp CTCTGGGAGGCTGGCACTGTCATTGTCCCCATCGTATaGATAGTGAGATGGAATGAATGCTGGGATGGCAGA +
Preference number: 6 (lower is better)
Translates to: LWEAGTVIVPIV*IVRWNECWDGR
Trigger: TCTGCCATCCCAGCATTCATTCCATCTCACTATCCATACGATGGGGACAATGACAGTGCCAGCCTCCCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473933.1
CDS CCA 72 bp ATTACCTATAATCCTCCTGTTGTCCTGAGCTGTGATTaGATTCCCCATGGTTCCTTGCACTCCAGGAGTCTG +
Preference number: 6 (lower is better)
Translates to: ITYNPPVVLSCD*IPHGSLHSRSL
Trigger: CAGACTCCTGGAGTGCAAGGAACCATGGGGAATCCAATCACAGCTCAGGACAACAGGAGGATTATAGGTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487477.1
CDS CCA 72 bp AGATGGAATGAATGCTGGGATGGCAGAATGAATGAATaGTGTGCTGGGTTGTGCACCAAAAACACAGTGGAG +
Preference number: 6 (lower is better)
Translates to: RWNECWDGRMNE*CAGLCTKNTVE
Trigger: CTCCACTGTGTTTTTGGTGCACAACCCAGCACACCATTCATTCATTCTGCCATCCCAGCATTCATTCCATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473933.1
CDS CCA 72 bp AGTCTGGCTCTGTTACCCACAATCCCACTGCTGGAGTaGAGTTTGGTTCCATTGCCCATAATTTCTTCCAAA +
Preference number: 6 (lower is better)
Translates to: SLALLPTIPLLE*SLVPLPIISSK
Trigger: TTTGGAAGAAATTATGGGCAATGGAACCAAACTCCACTCCAGCAGTGGGATTGTGGGTAACAGAGCCAGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487477.1
CDS CAA 90 bp CCGTCTGTCCGTCTGTCTGTCTCTACTCACCATAGAGCCCAATCATaGTTTCCAAGATTAAAACCCTCTCAGCTAAAATCTTCAAAGCCT +
Preference number: 6 (lower is better)
Translates to: PSVRLSVSTHHRAQS*FPRLKPSQLKSSKP
Trigger: AGGCTTTGAAGATTTTAGCTGAGAGGGTTTTAATCTTGGAAACAATGATTGGGCTCTATGGTGAGTAGAGACAGACAGACGGACAGACGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487477.1
CDS TCA 72 bp GACTCTGTTACCCATGATTTCTCTAGAGCTGAAGGCTaGCTAGAGTCTGGATCCATTACCTATAATCCTCCT +
Preference number: 6 (lower is better)
Translates to: DSVTHDFSRAEG*LESGSITYNPP
Trigger: AGGAGGATTATAGGTAATGGATCCAGACTCTAGTCAGCCTTCAGCTCTAGAGAAATCATGGGTAACAGAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487477.1
CDS GCA 72 bp ACAATAAAAGATACCATTTATCCACCACCTACTGTGTaGCAGGCTTCTGTACATGGATGTTACGCAGCTCTG +
Preference number: 6 (lower is better)
Translates to: TIKDTIYPPPTV*QASVHGCYAAL
Trigger: CAGAGCTGCGTAACATCCATGTACAGAAGCCTGGCACACAGTAGGTGGTGGATAAATGGTATCTTTTATTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473933.1
CDS CAA 90 bp GCTCTGTTACCCACAATCCCACTGCTGGAGTGGAGTTTGGTTCCATaGCCCATAATTTCTTCCAAACTTAAAATCTTTCATCTCTGGTTC +
Preference number: 6 (lower is better)
Translates to: ALLPTIPLLEWSLVP*PIISSKLKIFHLWF
Trigger: GAACCAGAGATGAAAGATTTTAAGTTTGGAAGAAATTATGGGCAATGGAACCAAACTCCACTCCAGCAGTGGGATTGTGGGTAACAGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487477.1
CDS CAA 90 bp AGGAGTCTGGCTCTGTTACCCACAATCCCACTGCTGGAGTGGAGTTaGGTTCCATTGCCCATAATTTCTTCCAAACTTAAAATCTTTCAT +
Preference number: 6 (lower is better)
Translates to: RSLALLPTIPLLEWS*VPLPIISSKLKIFH
Trigger: ATGAAAGATTTTAAGTTTGGAAGAAATTATGGGCAATGGAACCAAACTCCACTCCAGCAGTGGGATTGTGGGTAACAGAGCCAGACTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487477.1
CDS CAA 72 bp CGTCTGTCTGTCTCTACTCACCATAGAGCCCAATCATaGTTTCCAAGATTAAAACCCTCTCAGCTAAAATCT +
Preference number: 6 (lower is better)
Translates to: RLSVSTHHRAQS*FPRLKPSQLKS
Trigger: AGATTTTAGCTGAGAGGGTTTTAATCTTGGAAACAATGATTGGGCTCTATGGTGAGTAGAGACAGACAGACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487477.1